Citrus Sinensis ID: 039338

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490---
Protein Sequence
MAFNNKPKKTNPSFWQSNLCITLFFIVIFTIPALFLLHTPTNLICPNLATNHNVNKPWSGDLRNAEFAWNLLSFLQNQPSKFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEADKWRYSKGWEQFDEENQREPFDVVHSESVALPHWLARNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDFGHQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAPNVESLHKTLEAAVSEGPMRLAQRGEACRQYAASMFTANKMALAYERLFLCIKNETFCDYP
Secondary Structure (PSIPRED)
ccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccEEEEEEcccccccccccHHHHHHHHHHHHHHcccEEEEEEcccccccccccccccccccEEEcccccccccccHHHHHHHHHHHHHHHHHccccccEEEEcccccHHHHHHHHHHHHHHHHccEEEEEEcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccEEEEccHHHHHHHHHHHccccccEEEEEcccccccccccccccHHHHHHHcccccccEEEEEEccccccccHHHHHHHHHHHHHHcccEEEEEEEcccHHHHHHHHcccEEEEccccHHHHHHHHHHccEEEEcccccccccHHHHHHHHHcccEEEEcccccccEEEcccccEEEEcccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHcccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccHHHHHHHHHHHHHHHHHHHccccccccccEEEcccccccccccccccHHHHHccccccccccccccEEEEEEEccccccccccHHHHHHHHHHHHHHcccEEEEEEcccccccccccccccccEEEEEEccccccccccHHHHHHHHHHHHHHHHHHcccccEEEccccHHHHHHHHHHHHHccccEEEEEEEccccccccccccccccccccHcccHHHHHHHHHHHHHHHHHccEEEEEcHHHHHHHHHHHccccccEEEEEccccHHHcccccccHHHHHHHHcccccccEEEEEEEcccccccHHHHHHHHHHHHHHccccEEEEEccccHHHHHHHHcccEEEEccccHHHHHHHHHHccEEEccccccccHHHHHHHHHHccccEEEEccccccEEEEcccccEEEccccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHccccccc
Coil and Loop (DISEMBL)
mafnnkpkktnpsfwqsnLCITLFFIVIFTIpalfllhtptnlicpnlatnhnvnkpwsgdlrNAEFAWNLLSFlqnqpskftLKIAVFsrkwpisttpggmerhAHTLHVALARrghrvhiftspvdninspsishqenddgsnnkypllhfhegeadkwryskgweqfdeenqrepfdvvhsesvalphwLARNVTNLAVSWHGIALESlqsgifqdltrkplepmslAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGIneneygvdlslgqsfrsrigipknasLVLGVAGrlvkdkghpllHEAFSKLMVKYPDVYLIVagsgpweqrykdfghQVLVMGSMSPAELRAFYNAIdifvnptlrpqgldLTLMEAMMsgkpvmasrfpsikgtivvddefgfmfapnvESLHKTLEAAVSEGPMRLAQRGEACRQYAASMFTANKMALAYERLFLCiknetfcdyp
Flexible Loop (DISEMBL)
mafnnkpkktnpsfWQSNLCITLFFIVIFTIPALFLLHTPTNLICPNLATNHNVNKPWSGDLRNAEFAWNLLSFLQNQPSKFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEADKWRYSKGWEQFDEENQREPFDVVHSESVALPHWLARNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDFGHQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAPNVESLHKTLEAAVSEGPMRLAQRGEACRQYAASMFTANKMALAYERLFLCIKnetfcdyp
Low Complexity Region (SEG)
MAFNNKPKKTNPSFWQSNLCITLFFIVIFTIPALFLLHTPTNLICPNLATNHNVNKPWSGDLRNAEFAWNLLSFLQNQPSKFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEADKWRYSKGWEQFDEENQREPFDVVHSESVALPHWLARNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDFGHQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAPNVESLHKTLEAAVSEGPMRLAQRGEACRQYAASMFTANKMALAYERLFLCIKNETFCDYP
Disordered region (IsUnstruct)
*************FWQSNLCITLFFIVIFTIPALFLLHTPTNLICPNLATNHNVNKPWSGDLRNAEFAWNLLSFLQNQPSKFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPV*********************PLLHFHEGEADKWRYSKGWEQFD******PFDVVHSESVALPHWLARNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDFGHQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAPNVESLHKTLEAAVS***MRLAQRGEACRQYAASMFTANKMALAYERLFLCIKNETFCD**
Disordered Region (DISOPRED)
*****************NLCITLFFIVIFTIPALFLLHTPTNLICPNL**************RNAEFA****************KIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEADKWRYSKGWEQFDEENQREPFDVVHSESVALPHWLARNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDFGHQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAPNVESLHKTLEAAVSEGPMRLAQRGEACRQYAASMFTANKMALAYERLFLCIKNE******
Disordered Region (DISEMBL)
**********NPSFWQSNLCITLFFIVIFTIPALFLLHTPTNLICPNLATNHNVNKPWSGDLRNAEFAWNLLSFLQNQPSKFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPS********GSNNKYPLLHFHEGEADKWRYSKGWEQFDEENQREPFDVVHSESVALPHWLARNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDFGHQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAPNVESLHKTLEAAVSEGPMRLAQRGEACRQYAASMFTANKMALAYERLFLCIKNETFCDYP
Disordered Region (DISPRO)
***************QSNLCITLFFIVIFTIPALFLLHTPTNLICPNLATNHNVNKPWSGDLRNAEFAWNLLSFLQNQPSKFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEADKWRYSKGWEQFDEENQREPFDVVHSESVALPHWLARNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDFGHQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAPNVESLHKTLEAAVSEGPMRLAQRGEACRQYAASMFTANKMALAYERLFLCIKNETFCDYP
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAFNNKPKKTNPSFWQSNLCITLFFIVIFTIPALFLLHTPTNLICPNLATNHNVNKPWSGDLRNAEFAWNLLSFLQNQPSKFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEADKWRYSKGWEQFDEENQREPFDVVHSESVALPHWLARNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDFGHQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAPNVESLHKTLEAAVSEGPMRLAQRGEACRQYAASMFTANKMALAYERLFLCIKNETFCDYP
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	493	2.2.26 [Sep-21-2011]
Q59002	390	Uncharacterized glycosylt	yes	no	0.665	0.841	0.230	3e-15
P26470	381	Lipopolysaccharide 1,2-N-	yes	no	0.326	0.422	0.266	1e-09
D0L476	458	D-inositol 3-phosphate gl	no	no	0.746	0.803	0.232	8e-08
D5USX8	438	D-inositol 3-phosphate gl	no	no	0.606	0.682	0.232	2e-07
A7TZT2	454	Mannosylfructose-phosphat	yes	no	0.330	0.359	0.281	3e-07
P37287	484	Phosphatidylinositol N-ac	yes	no	0.624	0.636	0.244	3e-07
C4LLD6	451	D-inositol 3-phosphate gl	yes	no	0.304	0.332	0.288	4e-07
Q6NJL3	427	D-inositol 3-phosphate gl	yes	no	0.671	0.775	0.235	5e-07
C3PK12	421	D-inositol 3-phosphate gl	no	no	0.385	0.451	0.278	8e-07
A0R043	382	GDP-mannose-dependent alp	no	no	0.379	0.489	0.254	1e-06

>sp|Q59002|Y1607_METJA Uncharacterized glycosyltransferase MJ1607 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ1607 PE=3 SV=1

 Score = 84.0 bits (206), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 91/394 (23%), Positives = 171/394 (43%), Gaps = 66/394 (16%)

Query: 84  LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDG 143
           +KIA+ + ++P     GG+  H   L   L R GH V + T   D      +   EN +G
Sbjct: 1   MKIAMVTWEYP-PRIVGGLAIHCKGLAEGLVRNGHEVDVITVGYD------LPEYENING 53

Query: 144 SN--NKYPLLHFHEGEADKWRYSKGWEQFDEENQR--------EPFDVVHSESVALPHWL 193
            N     P+ H H            W  F  E           + +DV+H     + H++
Sbjct: 54  VNVYRVRPISHPH---------FLTWAMFMAEEMEKKLGILGVDKYDVIHCHD-WMTHFV 103

Query: 194 ARNVTNLAVSWHGIALESLQ----SGIFQDLTRKPLEPMSLAFNKSLQGVMLKVLNEIRF 249
             N+ ++    +  ++ S +     G++ D +                    K ++ + +
Sbjct: 104 GANLKHICRMPYVQSIHSTEIGRCGGLYSDDS--------------------KAIHAMEY 143

Query: 250 FNKY--AHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQ--SFRSRIG 305
            + Y     + +S S  E +  ++  P ++V VI NGIN  E+ ++LS  +  +FR  IG
Sbjct: 144 LSTYESCQVITVSKSLKEEVCSIFNTPEDKVKVIYNGINPWEFDINLSWEEKINFRRSIG 203

Query: 306 IPKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDFG---- 361
           +  +  ++L V GRL   KG   L  A  K++ ++ +  L++AGSG      +D      
Sbjct: 204 VQDDEKMILFV-GRLTYQKGIEYLIRAMPKILERH-NAKLVIAGSGDMRDYLEDLCYQLG 261

Query: 362 --HQVLVMGSMSPAELRAFYNAIDIFVNPTL-RPQGLDLTLMEAMMSGKPVMASRFPSIK 418
             H+V+ +G ++   L+  Y + D+ V P++  P G  +  +EAM +G PV+ S    + 
Sbjct: 262 VRHKVVFLGFVNGDTLKKLYKSADVVVIPSVYEPFG--IVALEAMAAGTPVVVSSVGGLM 319

Query: 419 GTIVVDDEFGFMFAPNVESLHKTLEAAVSEGPMR 452
             I  +    +++  N +S+   ++  +S+   R
Sbjct: 320 EIIKHEVNGIWVYPKNPDSIAWGVDRVLSDWGFR 353

Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (taxid: 243232)
EC: 2EC: .EC: 4EC: .EC: -EC: .EC: -

>sp|P26470|WAAK_SALTY Lipopolysaccharide 1,2-N-acetylglucosaminetransferase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=waaK PE=3 SV=1

 Score = 64.7 bits (156), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 87/180 (48%), Gaps = 19/180 (10%)

Query: 272 QIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVAGRLVKDKGHPLLHE 331
           ++P+  V ++ NG     Y  +     + R ++ I ++A+++L  AGR+  DKG  LL +
Sbjct: 157 RLPAAAVSIVPNGFCAETYKRNPQ--DNLRQQLNIAEDATVLL-YAGRISPDKGILLLLQ 213

Query: 332 AFSKLMVKYPDVYLIVAGSGPWEQRY--------------KDFGHQVLVMGSMSPAELRA 377
           AF +L     ++ L+V G  P+  R               K+ G   ++ G  SP ++  
Sbjct: 214 AFKQLRTLRSNIKLVVVGD-PYASRKGEKAEYQKKVLDAAKEIGTDCIMAGGQSPDQMHN 272

Query: 378 FYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAPNVES 437
           FY+  D+ + P+   +   +  +EAM +GK V+AS+   I    V+D   G+  A  + S
Sbjct: 273 FYHIADLVIVPSQVEEAFCMVAVEAMAAGKAVLASKKGGI-SEFVLDGITGYHLAEPMSS 331

Adds the terminal N-acetyl-D-glucosamine group on the glucose(II) group of LPS.

Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (taxid: 99287)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

EC: 6

>sp|D0L476|MSHA_GORB4 D-inositol 3-phosphate glycosyltransferase OS=Gordonia bronchialis (strain ATCC 25592 / DSM 43247 / JCM 3198 / NCTC 10667) GN=mshA PE=3 SV=1

 Score = 58.9 bits (141), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 95/408 (23%), Positives = 167/408 (40%), Gaps = 40/408 (9%)

Query: 94  PISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSN---NKYPL 150
           P +   GGM  +       LARRG  V IFT    + ++P ++        N     +  
Sbjct: 23  PGTGDAGGMNVYVWQTATRLARRGVEVEIFTRATSSSDAPRVAAAPRVTVRNVVAGPFEG 82

Query: 151 LHFHEGEADKWRYSKGWEQFDEENQREPFDVVHSESVALPHWLARNVTNLAVSWHGIALE 210
           L   +  A    ++ G  + +   +   +D++HS      +WL+  V  LA    G+ L 
Sbjct: 83  LDKRDLPAQLCAFTAGVLRAEAAQEPGYYDLIHSH-----YWLSGQVGWLARDRWGVPL- 136

Query: 211 SLQSGIFQDLTRKPLEPMSLAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDV 270
                +    T   ++  SLA   + +   L+V+ E +  ++    +A +++    L  +
Sbjct: 137 -----VHTAHTLAAVKNASLAAGDTAE-PQLRVIGEQQVVDEADRLIANTETEASELISM 190

Query: 271 YQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVAGRLVKDKGHPLLH 330
           Y     R+ V+  G + + Y       +  R+ +G+ +N ++V  V GR+   K   LL 
Sbjct: 191 YGADPARIDVVTPGADLDCYTPGPR--EMARTSLGLDQNEAIVTFV-GRIQPLKAPDLLI 247

Query: 331 EAFSKLM-----VKYPDVYLIVAG-SGPWEQRYK---DFGHQVLVMGSMS------PAEL 375
           EA + L+      + P   LIV G SG    R     D  H + +  +++      PA L
Sbjct: 248 EAAAPLIRRSRTSRRPVRVLIVGGPSGSGLDRPTALIDLAHDLGIADAVTFLPPQAPARL 307

Query: 376 RAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAPN- 434
              Y A ++   P+   +   L  +EA   G PV+A+    +    V     G +   + 
Sbjct: 308 ADVYRASNLVAVPS-HSESFGLVAIEAQACGTPVLAADVGGLS-VAVAGGRTGVLVGSHA 365

Query: 435 VESLHKTLEAAVSEGPMRLAQRGEACRQYAASM---FTANKMALAYER 479
           V      LE A+++ P RLA+ G   R +A       T + M  +Y R
Sbjct: 366 VGDWTNALEKALAQ-PDRLAEMGRNARVHAEQFSWDHTVDAMLSSYSR 412

Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2-acetamido-2-deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway.

Gordonia bronchialis (strain ATCC 25592 / DSM 43247 / JCM 3198 / NCTC 10667) (taxid: 526226)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 2

EC: 5

EC: 0

>sp|D5USX8|MSHA_TSUPD D-inositol 3-phosphate glycosyltransferase OS=Tsukamurella paurometabola (strain ATCC 8368 / DSM 20162 / JCM 10117 / NBRC 16120 / NCTC 13040) GN=mshA PE=3 SV=1

 Score = 57.8 bits (138), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 77/331 (23%), Positives = 137/331 (41%), Gaps = 32/331 (9%)

Query: 100 GGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSN---NKYPLLHFHEG 156
           GGM  +     + LA RG  V IFT    + ++P +         N     +  L   + 
Sbjct: 34  GGMNVYIWQTSLELAARGIEVEIFTRATSSSDAPIVEAAPGIRVRNVVAGPFEGLDKTDL 93

Query: 157 EADKWRYSKGWEQFDEENQREPFDVVHSESVALPHWLARNVTNLAVSWHGIALESLQSGI 216
            A    ++ G ++ +   +   FD++HS      +WL+  V  LA    G+ L      +
Sbjct: 94  PAQLCAFAAGVQRAEAREEPGYFDLIHSH-----YWLSGQVGWLARDRWGVPL------V 142

Query: 217 FQDLTRKPLEPMSLAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSE 276
               T   ++  +LA   + +    +++ E +  ++    +  ++     L D++ +P +
Sbjct: 143 HTAHTLAAVKNRALAEGDTAE-PQARIIGEQQVSDEADRLIVNTEVEASQLADLHDVPLD 201

Query: 277 RVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVAGRLVKDKGHPLLHEAFSKL 336
           R+ V+  G +   Y      G   R  +GI  +  LVL   GR+   K   LL  A + L
Sbjct: 202 RIDVVYPGADLATY--TPGDGAGARRELGIAPD-ELVLTFVGRIQPHKAPDLLLRAAAPL 258

Query: 337 MVKYPD--VYLIVAG--SGPWEQR-------YKDFG--HQVLVMGSMSPAELRAFYNAID 383
           +  +PD  + ++V G  SG   +R        ++ G  H V       PA L   Y A D
Sbjct: 259 IHAHPDRRIRILVVGGPSGTGLERPDALIALARELGIEHAVTFEPPRPPAGLAEVYRASD 318

Query: 384 IFVNPTLRPQGLDLTLMEAMMSGKPVMASRF 414
           + V P+   +   L  +EA   G PV+A++ 
Sbjct: 319 LVVVPSYS-ESFGLVAVEAQACGTPVVAAKV 348

Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2-acetamido-2-deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway.

Tsukamurella paurometabola (strain ATCC 8368 / DSM 20162 / JCM 10117 / NBRC 16120 / NCTC 13040) (taxid: 521096)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 2

EC: 5

EC: 0

>sp|A7TZT2|MFPS_AGRT5 Mannosylfructose-phosphate synthase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=mfpsA PE=1 SV=1

 Score = 57.4 bits (137), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 85/192 (44%), Gaps = 29/192 (15%)

Query: 246 EIRFFNKYAHHVAISDSCG----------EMLRDVYQIPSERVHVILNGINENEY-GVDL 294
           E  F  +  H + I  SC           ++L + Y +  + +H+I  G ++N +  V  
Sbjct: 177 EFNFKERIQHELIIYRSCDMVIATTPVQLDVLIEDYGLKRKHIHMIPPGYDDNRFFPVSD 236

Query: 295 SLGQSFRSRIGIPKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPD--VYLIVAGSGP 352
           +  Q  R R G      L LG   RL  +KG+ LL + FS L  + P+  ++L V G   
Sbjct: 237 ATRQMIRQRFGFEGKVVLALG---RLATNKGYDLLIDGFSVLAEREPEARLHLAVGGENM 293

Query: 353 WEQ----------RYKDFG--HQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLM 400
            EQ          R K  G   +V   G ++  +L   Y A D+FV  + R +   +T +
Sbjct: 294 DEQETTILNQLKERVKSLGLEDKVAFSGYVADEDLPDIYRAADLFVLSS-RYEPFGMTAI 352

Query: 401 EAMMSGKPVMAS 412
           EAM SG P + +
Sbjct: 353 EAMASGTPTVVT 364

Agrobacterium tumefaciens (strain C58 / ATCC 33970) (taxid: 176299)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 2

EC: 4

EC: 6

>sp|P37287|PIGA_HUMAN Phosphatidylinositol N-acetylglucosaminyltransferase subunit A OS=Homo sapiens GN=PIGA PE=1 SV=1

 Score = 57.0 bits (136), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 87/356 (24%), Positives = 147/356 (41%), Gaps = 48/356 (13%)

Query: 100 GGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKY-PL-LHFHEGE 157
           GG+E H + L   L  RGH+V I T    N     I +  +  G    Y PL + +++  
Sbjct: 47  GGVESHIYQLSQCLIERGHKVIIVTHAYGN--RKGIRYLTS--GLKVYYLPLKVMYNQST 102

Query: 158 ADKWRYSKGWEQFDEENQREPFDVVHSESVALPHWLARNVTNLAVSWHGIALESLQSGIF 217
           A    +S    ++    +R      HS   A+ H            +H   +  LQ+ +F
Sbjct: 103 ATTLFHSLPLLRYIFVRERVTIIHSHSSFSAMAH---------DALFHAKTM-GLQT-VF 151

Query: 218 QDLTRKPLEPMSLAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSER 277
            D +      +S      L  V L   N         H + +S +  E       +  E 
Sbjct: 152 TDHSLFGFADVSSVLTNKLLTVSLCDTN---------HIICVSYTSKENTVLRAALNPEI 202

Query: 278 VHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVAGRLVKDKGHPLLHEAFSKLM 337
           V VI N ++  ++  D      FR      ++ S+ + V  RLV  KG  LL     +L 
Sbjct: 203 VSVIPNAVDPTDFTPD-----PFR------RHDSITIVVVSRLVYRKGIDLLSGIIPELC 251

Query: 338 VKYPDVYLIVAGSGP-------WEQRYKDFGHQVLVMGSMSPAELRAFYNAIDIFVNPTL 390
            KYPD+  I+ G GP         +RY+    +V ++G++   ++R       IF+N +L
Sbjct: 252 QKYPDLNFIIGGEGPKRIILEEVRERYQ-LHDRVRLLGALEHKDVRNVLVQGHIFLNTSL 310

Query: 391 RPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAPNVESLHKTLEAAV 446
             +   + ++EA   G  V+++R   I    V+ +    +  P+V+SL + LE A+
Sbjct: 311 -TEAFCMAIVEAASCGLQVVSTRVGGIPE--VLPENLIILCEPSVKSLCEGLEKAI 363

Necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, the very early intermediate in GPI-anchor biosynthesis.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: 9

EC: 8

>sp|C4LLD6|MSHA_CORK4 D-inositol 3-phosphate glycosyltransferase OS=Corynebacterium kroppenstedtii (strain DSM 44385 / CCUG 35717) GN=mshA PE=3 SV=1

 Score = 56.6 bits (135), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 82/170 (48%), Gaps = 20/170 (11%)

Query: 271 YQIPSERVHVILNGINENEY--GVDLSLGQSFRSRIGIPKNASLVLGVAGRLVKDKGHPL 328
           Y    E + V+L G +  ++  G D +  +S R  +G+P +A+ V+   GR+ + KG  +
Sbjct: 211 YDADPEHIDVVLPGADVTQFSPGSDRATERS-RRELGVPLHAT-VIAFVGRMQRLKGPQV 268

Query: 329 LHEAFSKLMVKYPDVYL-IVAGSGP----------WEQRYKDFGHQVLV--MGSMSPAEL 375
           L  A + +M K+PD  L ++   GP          +E   +D G   +V  +    P +L
Sbjct: 269 LLRAVANMMKKHPDQELRVLMCGGPSGNGLARPTEFEDLARDLGIDPIVRFLAPRPPEDL 328

Query: 376 RAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDD 425
            + Y A DI   P+   +   L  +EA  SG PV+A+R   +   I +DD
Sbjct: 329 ASVYRAADIVAIPSYN-ESFGLVAVEAQASGTPVVAARAGGLP--ITIDD 375

Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2-acetamido-2-deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway.

Corynebacterium kroppenstedtii (strain DSM 44385 / CCUG 35717) (taxid: 645127)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 2

EC: 5

EC: 0

>sp|Q6NJL3|MSHA_CORDI D-inositol 3-phosphate glycosyltransferase OS=Corynebacterium diphtheriae (strain ATCC 700971 / NCTC 13129 / Biotype gravis) GN=mshA PE=3 SV=1

 Score = 56.2 bits (134), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 88/374 (23%), Positives = 146/374 (39%), Gaps = 43/374 (11%)

Query: 82  FTLKIAVFS-----RKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSIS 136
            T++IA+ S      + P S   GGM  +  ++   LARRG  V I+T          + 
Sbjct: 2   MTMRIAMISIHTSPLQQPGSGDAGGMNVYIISIARELARRGVDVDIYTRATRPSQGDVVE 61

Query: 137 HQENDDGSN---NKYPLLHFHEGEADKWRYSKGWEQFDEENQREPFDVVHSES--VALPH 191
            +      N     Y  L   E       ++ G  QF + +    +DV+HS         
Sbjct: 62  VESGLRVINIVAGPYEGLSKEELPTQLAAFAGGVVQFAKCHHMR-YDVIHSHYWLSGQVG 120

Query: 192 WLARNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQGVMLKVLNEIRFFN 251
           WL R++ N+ +      L ++++        +  E   +   + +    + V+N     N
Sbjct: 121 WLLRDLWNIPLVHTAHTLAAVKNAHRSAGDTEESEARRICEQQLVDNADILVVNTPEETN 180

Query: 252 KYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEY--GVDLSLGQSFRSRIGIPKN 309
               H              Y    + V VI  G N   +  G   +  QS R  +GIP +
Sbjct: 181 DLVRH--------------YDANPDSVAVIAPGANVELFTPGTQRNTEQSRRC-LGIPLH 225

Query: 310 ASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIV------AGSGPWEQRYKDF--- 360
              V+   GRL + KG  +L  A ++++ + PD  + V      +G+    + Y +    
Sbjct: 226 TK-VMAFVGRLQQFKGPEVLLRAVAEMLERDPDRDMRVIMCGGPSGAAATVEHYIELTRS 284

Query: 361 ---GHQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSI 417
               H+V  +    P EL + Y A D+   P+   +   L  MEA  SG PV+A+R   +
Sbjct: 285 LGIAHRVRFLDPRPPEELVSVYQAADVVAVPSYN-ESFGLVAMEAQASGTPVVAARVGGL 343

Query: 418 KGTIVVDDEFGFMF 431
               VVD E G + 
Sbjct: 344 P-IAVVDGETGVLV 356

Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2-acetamido-2-deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway.

Corynebacterium diphtheriae (strain ATCC 700971 / NCTC 13129 / Biotype gravis) (taxid: 257309)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 2

EC: 5

EC: 0

>sp|C3PK12|MSHA_CORA7 D-inositol 3-phosphate glycosyltransferase OS=Corynebacterium aurimucosum (strain ATCC 700975 / DSM 44827 / CN-1) GN=mshA PE=3 SV=1

 Score = 55.8 bits (133), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 18/208 (8%)

Query: 271 YQIPSERVHVILNGINENEY--GVDLSLGQSFRSRIGIPKNASLVLGVAGRLVKDKGHPL 328
           Y    + + V+  G + + Y  G D  + +  R ++GIP +  +V  V GRL K KG  +
Sbjct: 183 YDASPDNIVVVSPGADTDLYTPGTD-RMTERARRQLGIPLHTKVVAFV-GRLQKFKGPDV 240

Query: 329 LHEAFSKLMVKYPDVYLIV--------AGSGP--WEQRYKDFGHQVLV--MGSMSPAELR 376
           L  A ++LM + PD  L V        A S P  +    ++ G + +V  +    P EL 
Sbjct: 241 LIRATAELMERDPDRRLRVVICGGASGANSSPDTYHNLARELGVERVVRFLSPRPPQELV 300

Query: 377 AFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAPNVE 436
           A Y A DI   P+   +   L  MEA  SG PV+A+    +   +   D    + + + +
Sbjct: 301 AIYQAADIVAVPSYN-ESFGLVAMEAQASGTPVVAAAVGGLPIAVADGDTGLLVHSHSAQ 359

Query: 437 SLHKTLEAAVSEGPMRLAQRGEACRQYA 464
                LE  + + P R++  GEA   +A
Sbjct: 360 DWADALEQLLDDDPRRISM-GEAAVDHA 386

Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2-acetamido-2-deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway.

Corynebacterium aurimucosum (strain ATCC 700975 / DSM 44827 / CN-1) (taxid: 548476)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 2

EC: 5

EC: 0

>sp|A0R043|PIMB_MYCS2 GDP-mannose-dependent alpha-(1-6)-phosphatidylinositol monomannoside mannosyltransferase OS=Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) GN=pimB PE=1 SV=1

 Score = 55.5 bits (132), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 86/204 (42%), Gaps = 17/204 (8%)

Query: 274 PSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVAGRLVKDKGHPLLHEAF 333
           PS  +  +  G++ + +  D       R R G+     +V     RLV  KG  +L  A 
Sbjct: 157 PSAALEHLPPGVDTDRFAPDPDARARMRERYGLGDRPVVV--CLSRLVPRKGQDMLIRAL 214

Query: 334 SKLMVKYPDVYLIVAGSGPW----EQRYKDFG---HQVLVMGSMSPAELRAFYNAIDIFV 386
            +L  + PD  L + G GP+    ++   D G   H V   G +   EL A +   D+F 
Sbjct: 215 PELRRRVPDTALAIVGGGPYLETLQRMASDLGVAEHVVFTRG-IPAEELPAHHAMADVFA 273

Query: 387 NPT------LRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAPNVESLHK 440
            P       L  +GL +  +EA   G PV+A R      T++       +   +V+++  
Sbjct: 274 MPCRTRGAGLDVEGLGIVYLEASACGVPVVAGRSGGAPETVLDGKTGTVVDGTDVDAITT 333

Query: 441 TLEAAVSEGPMRLAQRGEACRQYA 464
            +   +++ P R A  G A R +A
Sbjct: 334 AVGDLLAD-PRRAAAMGVAGRHWA 356

Catalyzes the addition of a mannose residue from GDP-D-mannose to the position 6 of a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1) to generate phosphatidyl-myo-inositol bearing alpha-1,2- and alpha-1,6-linked mannose residues (PIM2). Can also add a mannose residue to the position 2 of a phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol mannoside (PIM1) or to the position 6 of a monoacyl phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (AcPIM1) to generate a mononacyl phosphatidyl-myo-inositol dimannoside (AcPIM2).

Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) (taxid: 246196)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

EC: 7

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	493
224071477	489	predicted protein [Populus trichocarpa]	0.983	0.991	0.777	0.0
224138428	488	predicted protein [Populus trichocarpa]	0.981	0.991	0.753	0.0
356560861	495	PREDICTED: D-inositol-3-phosphate glycos	0.995	0.991	0.722	0.0
255557739	486	glycosyltransferase, putative [Ricinus c	0.981	0.995	0.748	0.0
449462501	487	PREDICTED: D-inositol 3-phosphate glycos	0.985	0.997	0.716	0.0
449515015	511	PREDICTED: D-inositol 3-phosphate glycos	0.985	0.951	0.716	0.0
356560611	490	PREDICTED: D-inositol-3-phosphate glycos	0.987	0.993	0.723	0.0
357517395	482	Phosphatidylinositol alpha-mannosyltrans	0.975	0.997	0.714	0.0
225427673	493	PREDICTED: uncharacterized protein LOC10	0.987	0.987	0.687	0.0
357484533	486	Capsular polysaccharide biosynthesis gly	0.977	0.991	0.698	0.0

>gi|224071477|ref|XP_002303479.1| predicted protein [Populus trichocarpa] gi|222840911|gb|EEE78458.1| predicted protein [Populus trichocarpa]

 Score =  793 bits (2049), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 385/495 (77%), Positives = 429/495 (86%), Gaps = 10/495 (2%)

Query: 1   MAFNNKPKKTN--PSFWQSNLCITLFFIVIFTIPALFLLHTPTNLICPNLATNHNVNKPW 58
           MAFN+KPKK +  PS  +S+LC TLFFIV+FTIPALFLLH PT  IC  L  NH  NKPW
Sbjct: 1   MAFNSKPKKPHAIPSQSKSSLCTTLFFIVLFTIPALFLLHAPTTSICTTLIANH-ANKPW 59

Query: 59  SGDLRNAEFAWNLLSFLQNQPSKFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGH 118
           SGDLRNA+FAWN L+F++N+P    LKIAVFSRKWP+ TTPGGMERHA+TLH ALA RGH
Sbjct: 60  SGDLRNADFAWNRLAFIENKPPPVKLKIAVFSRKWPVGTTPGGMERHAYTLHTALAHRGH 119

Query: 119 RVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEADKWRYSKGWEQFDEENQRE- 177
           +VHIFTSPVD  N+PS+SH     GS   YP +HFHEGE  KWRY+K WEQFDEENQRE 
Sbjct: 120 QVHIFTSPVDE-NNPSVSH-----GSAVSYPQIHFHEGEPGKWRYNKAWEQFDEENQRER 173

Query: 178 PFDVVHSESVALPHWLARNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQ 237
           PFDVVHSESVALPHWLARNV NLAVSWHGIALESLQS I+QDLTRKP EP+S  FN+SL 
Sbjct: 174 PFDVVHSESVALPHWLARNVQNLAVSWHGIALESLQSSIYQDLTRKPKEPISPDFNRSLH 233

Query: 238 GVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLG 297
           GV+ KVLNEIRFF  Y HHVAISDSCGEMLRDVYQIPS RVHVI+NG++E+ +GVD+ LG
Sbjct: 234 GVVPKVLNEIRFFKNYEHHVAISDSCGEMLRDVYQIPSRRVHVIVNGVDEHGFGVDVRLG 293

Query: 298 QSFRSRIGIPKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRY 357
             FRS+IG+P NASLVLGVAGRLVKDKGHPLL+EAFS+ M K+PDVYLIVAGSGPW+QRY
Sbjct: 294 HEFRSKIGVPINASLVLGVAGRLVKDKGHPLLYEAFSEFMTKHPDVYLIVAGSGPWQQRY 353

Query: 358 KDFGHQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSI 417
           K+ G +VLV+GSMSP+ LRAFYN+IDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSI
Sbjct: 354 KELGTRVLVLGSMSPSALRAFYNSIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSI 413

Query: 418 KGTIVVDDEFGFMFAPNVESLHKTLEAAVSEGPMRLAQRGEACRQYAASMFTANKMALAY 477
           KGTIVVDDEFGFMF+PNV SL + LEAAV EG  RLAQRG+AC+QYAASMFTA+KMALAY
Sbjct: 414 KGTIVVDDEFGFMFSPNVASLLEALEAAVMEGSRRLAQRGKACQQYAASMFTASKMALAY 473

Query: 478 ERLFLCIKNETFCDY 492
           ERLFLCIKNET+C Y
Sbjct: 474 ERLFLCIKNETYCTY 488

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224138428|ref|XP_002326600.1| predicted protein [Populus trichocarpa] gi|222833922|gb|EEE72399.1| predicted protein [Populus trichocarpa]

 Score =  766 bits (1977), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/495 (75%), Positives = 418/495 (84%), Gaps = 11/495 (2%)

Query: 1   MAFNNKPKK--TNPSFWQSNLCITLFFIVIFTIPALFLLHTPTNLICPNLATNHNVNKPW 58
           M FNNKPKK    PS  +SNLC TLFF+V+FTIPALFLLH PT  IC  L  NH   +PW
Sbjct: 1   MPFNNKPKKPYAIPSQSKSNLCTTLFFVVLFTIPALFLLHAPTTSICTTLIANHA--RPW 58

Query: 59  SGDLRNAEFAWNLLSFLQNQPSKFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGH 118
           SGDLRNAEFAWN L+F++N+P    LKIAVFSRKWP  TTPGGMERHA+TLH ALA RGH
Sbjct: 59  SGDLRNAEFAWNRLAFIENKPPPVKLKIAVFSRKWPFGTTPGGMERHAYTLHTALAHRGH 118

Query: 119 RVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEADKWRYSKGWEQFDEENQR-E 177
           +VHIFTSPVD  NSPS+SH      S   YP +HFHEGE  KW ++K W+QF+EENQR +
Sbjct: 119 QVHIFTSPVDE-NSPSVSH-----ASVISYPQIHFHEGEPGKWIHNKAWKQFEEENQRAK 172

Query: 178 PFDVVHSESVALPHWLARNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQ 237
           PFDVVHSESVALP+WLAR V NLAVSWHGIALE LQS IFQDL RKP E ++  FNKSLQ
Sbjct: 173 PFDVVHSESVALPYWLARRVPNLAVSWHGIALEGLQSSIFQDLARKPNEAITPYFNKSLQ 232

Query: 238 GVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLG 297
           G + +VL+EIRFF KY HHVAISDSCGEMLRDVYQIP  RVHVI+NG++E+++G D+  G
Sbjct: 233 GFVPRVLDEIRFFKKYEHHVAISDSCGEMLRDVYQIPRRRVHVIVNGVDEDDFGEDVRSG 292

Query: 298 QSFRSRIGIPKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRY 357
             FRSRIG+P NASLVLGVAGRLVKDKGHP+L+EAFS+ M ++PDVYLIVAGSGPWEQRY
Sbjct: 293 HEFRSRIGVPVNASLVLGVAGRLVKDKGHPILYEAFSEFMTEHPDVYLIVAGSGPWEQRY 352

Query: 358 KDFGHQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSI 417
           K+ G +VLV+GSM+P+ELRAFYN+IDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSI
Sbjct: 353 KELGPRVLVLGSMNPSELRAFYNSIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSI 412

Query: 418 KGTIVVDDEFGFMFAPNVESLHKTLEAAVSEGPMRLAQRGEACRQYAASMFTANKMALAY 477
           KGTIVVDDEFGFMF+PNVESL +TLEA   EG  RLAQRG+ACRQYAASMFTA KMALAY
Sbjct: 413 KGTIVVDDEFGFMFSPNVESLLETLEAVAMEGSRRLAQRGKACRQYAASMFTARKMALAY 472

Query: 478 ERLFLCIKNETFCDY 492
           ERLFLCIKNETFC Y
Sbjct: 473 ERLFLCIKNETFCTY 487

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356560861|ref|XP_003548705.1| PREDICTED: D-inositol-3-phosphate glycosyltransferase-like [Glycine max]

 Score =  747 bits (1929), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 359/497 (72%), Positives = 412/497 (82%), Gaps = 6/497 (1%)

Query: 1   MAFNNKPKKTNPSFWQSNLCITLFFIVIFTIPALFLLHTPTNL-ICPNLATNHNVNKPWS 59
           MA N    K + S      C TLFFIV+FTIP LFLLH PT   IC  LA++    K WS
Sbjct: 1   MALNTTKSKKSTSPSNFYFCTTLFFIVLFTIPVLFLLHAPTTTSICTTLASSQA--KTWS 58

Query: 60  GDLRNAEFAWNLLSFLQNQPSKFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHR 119
           GDL+  EFAWN LSF ++ PS F LK+AVFSRKWPI TTPGGMERHAHTLH ALARRGH+
Sbjct: 59  GDLQLVEFAWNRLSFFEHNPSPFALKVAVFSRKWPIGTTPGGMERHAHTLHTALARRGHQ 118

Query: 120 VHIFTSPVDNINSPSISHQENDDGSNN---KYPLLHFHEGEADKWRYSKGWEQFDEENQR 176
           VH+FTSP ++ +    S + N++         P +HFHEGE  +WRY+K WEQF EENQR
Sbjct: 119 VHVFTSPPEDESISVSSSEVNENKHQEGAPSSPYIHFHEGEPGRWRYNKAWEQFVEENQR 178

Query: 177 EPFDVVHSESVALPHWLARNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSL 236
           EPF VVHSESVALPHWLARN++NLAVSWHGIALESLQS IFQDLTR+  EPMS  FNKS+
Sbjct: 179 EPFHVVHSESVALPHWLARNMSNLAVSWHGIALESLQSSIFQDLTRRQDEPMSPLFNKSI 238

Query: 237 QGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSL 296
           QGV+ KVLNEIRFF  YAHHVAISDSCGEMLRDVYQIP+ RVHVILNG++E+++G D+ L
Sbjct: 239 QGVVPKVLNEIRFFKNYAHHVAISDSCGEMLRDVYQIPNRRVHVILNGVDEDDFGEDVEL 298

Query: 297 GQSFRSRIGIPKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQR 356
           G+ FR++IGIP NASLVLGVAGRLVKDKGHPLLHEA+S+L+ K+P+VYLIVAGSGPWE R
Sbjct: 299 GREFRTKIGIPGNASLVLGVAGRLVKDKGHPLLHEAYSRLITKHPNVYLIVAGSGPWENR 358

Query: 357 YKDFGHQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPS 416
           Y+D G QVLV+GSMSP+ LRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKP++ASRFPS
Sbjct: 359 YRDLGSQVLVLGSMSPSMLRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPLLASRFPS 418

Query: 417 IKGTIVVDDEFGFMFAPNVESLHKTLEAAVSEGPMRLAQRGEACRQYAASMFTANKMALA 476
           IKGTIVVDDE+G+MF+PNVESL + LEA V EGP RLA+RG+ACR+YAA MFTA KMALA
Sbjct: 419 IKGTIVVDDEYGYMFSPNVESLQEALEAVVKEGPQRLARRGKACREYAAKMFTARKMALA 478

Query: 477 YERLFLCIKNETFCDYP 493
           YERLFLCIK+ +FC YP
Sbjct: 479 YERLFLCIKDRSFCTYP 495

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255557739|ref|XP_002519899.1| glycosyltransferase, putative [Ricinus communis] gi|223540945|gb|EEF42503.1| glycosyltransferase, putative [Ricinus communis]

 Score =  746 bits (1926), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/494 (74%), Positives = 419/494 (84%), Gaps = 10/494 (2%)

Query: 1   MAFNNKPKKTNPSFWQSNLCITLFFIVIFTIPALFLLHTPTNLICPNLATNHNVNKPWSG 60
           MAFNNKPKKT+ S    NLC +LFFIV+FTIPALFLLH+ T+ IC  L+  HN ++ WSG
Sbjct: 2   MAFNNKPKKTHLSS-HFNLCTSLFFIVLFTIPALFLLHSSTSSICTTLSV-HN-SRSWSG 58

Query: 61  DLRNAEFAWNLLSFLQNQP-SKFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHR 119
           DLR+AEFAWN LSF++N P   F L+IAVFSRKWPI TTPGGMERHA TLH ALARRGH+
Sbjct: 59  DLRSAEFAWNRLSFVENLPLPVFKLRIAVFSRKWPIGTTPGGMERHAFTLHTALARRGHQ 118

Query: 120 VHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEADKWRYSKGWEQFDEENQREPF 179
           VH+FTSPV+       S Q +   S++  P +H HEGE  KWRY+K WEQF +ENQREPF
Sbjct: 119 VHVFTSPVEE------SSQSHTLSSSSSSPKIHCHEGEPGKWRYNKAWEQFVKENQREPF 172

Query: 180 DVVHSESVALPHWLARNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQGV 239
           DVVHSESVALPHWLARNV NLAVSWHGIALESLQS I+QDLTRKP EP+S   N+SL GV
Sbjct: 173 DVVHSESVALPHWLARNVPNLAVSWHGIALESLQSDIYQDLTRKPNEPISPIVNQSLYGV 232

Query: 240 MLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQS 299
           + K+LNEIRFF  YAHHVAISDSCGEMLRDVYQIPS+RVHVILNG++E+++  D+ LG  
Sbjct: 233 LPKILNEIRFFKNYAHHVAISDSCGEMLRDVYQIPSQRVHVILNGVDEDDFRQDVRLGLE 292

Query: 300 FRSRIGIPKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKD 359
           FRS+IGIP NASLVLGVAGRLVKDKGHPLL+EAFS L  KYP VYL+VAGSGPW+QRYKD
Sbjct: 293 FRSKIGIPPNASLVLGVAGRLVKDKGHPLLYEAFSVLKEKYPHVYLVVAGSGPWQQRYKD 352

Query: 360 FGHQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKG 419
            G QVLV+GSMSPAELRAFYN+IDIFVNPTLRPQGLDLTLMEAMMSGK VMASRFPSIKG
Sbjct: 353 LGAQVLVLGSMSPAELRAFYNSIDIFVNPTLRPQGLDLTLMEAMMSGKAVMASRFPSIKG 412

Query: 420 TIVVDDEFGFMFAPNVESLHKTLEAAVSEGPMRLAQRGEACRQYAASMFTANKMALAYER 479
           TIVVDDEFG+MF+PNVESL ++LE A+ +G  RLA+RG+ACR+YA SMFTA KMALA+ER
Sbjct: 413 TIVVDDEFGYMFSPNVESLVQSLELAIKDGSKRLAERGKACREYAVSMFTAKKMALAFER 472

Query: 480 LFLCIKNETFCDYP 493
           LF CIKNETFC YP
Sbjct: 473 LFFCIKNETFCTYP 486

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449462501|ref|XP_004148979.1| PREDICTED: D-inositol 3-phosphate glycosyltransferase-like [Cucumis sativus]

 Score =  740 bits (1910), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 354/494 (71%), Positives = 408/494 (82%), Gaps = 8/494 (1%)

Query: 1   MAFNNK-PKKTNPSFWQSNLCITLFFIVIFTIPALFLLHTPTNLICPNLATNHNVNKPWS 59
           MAFN+K PKK   S    NLC TLFF+V+FT+P LFLLHT T  +C   A+   +N  W 
Sbjct: 1   MAFNSKFPKKPTVSPSHCNLCTTLFFVVLFTVPTLFLLHTSTISVCSLSASTTRLNS-WF 59

Query: 60  GDLRNAEFAWNLLSFLQNQPSKFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHR 119
           GDLR+A+F+WN L+F +++P    LKIAVFSRKWPI T PGGMERHAHTLH ALARRGHR
Sbjct: 60  GDLRDAQFSWNRLAFDEDKPPPVVLKIAVFSRKWPIGTIPGGMERHAHTLHTALARRGHR 119

Query: 120 VHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEADKWRYSKGWEQFDEENQREPF 179
           VH+FTSPV N           +  S    P +HFHEGE  +WRY+K WEQ++EEN REPF
Sbjct: 120 VHVFTSPVSNYGV------VQNLSSETSAPYIHFHEGEPGRWRYNKAWEQYEEENHREPF 173

Query: 180 DVVHSESVALPHWLARNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQGV 239
           DVVHSESVALPHWLA+ ++NLAVSWHGIALESLQS IFQDL R+P EPMS AFNK++QG 
Sbjct: 174 DVVHSESVALPHWLAKQLSNLAVSWHGIALESLQSDIFQDLARRPNEPMSPAFNKNIQGD 233

Query: 240 MLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQS 299
           + KVLNEIRFF  Y HHVAISDSCGEMLRD+YQIPS RVHVI+NG++E+++  D  LG+ 
Sbjct: 234 VPKVLNEIRFFKDYVHHVAISDSCGEMLRDMYQIPSRRVHVIVNGVDEDDFREDFKLGKE 293

Query: 300 FRSRIGIPKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKD 359
           F++RIGIP+NASLVLGVAGRLVKDKGHPLLHEAFS +  ++P+VYL+VAG+GPWEQRY+D
Sbjct: 294 FKARIGIPRNASLVLGVAGRLVKDKGHPLLHEAFSIITEQHPNVYLVVAGAGPWEQRYRD 353

Query: 360 FGHQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKG 419
            G QVLV+GSMSP+ELRAFYNAIDIFVNPTLRPQGLDLTLMEAM SGKPVMASRFPSIKG
Sbjct: 354 LGPQVLVLGSMSPSELRAFYNAIDIFVNPTLRPQGLDLTLMEAMASGKPVMASRFPSIKG 413

Query: 420 TIVVDDEFGFMFAPNVESLHKTLEAAVSEGPMRLAQRGEACRQYAASMFTANKMALAYER 479
           TIVVDDE+GFMFAPNVESL +TLEA   EG  RL QRG+ACR+YA SMFTA KMALAYER
Sbjct: 414 TIVVDDEYGFMFAPNVESLVETLEAVAKEGSDRLRQRGKACRRYATSMFTARKMALAYER 473

Query: 480 LFLCIKNETFCDYP 493
           LFLCIK+E FC+YP
Sbjct: 474 LFLCIKDEAFCNYP 487

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449515015|ref|XP_004164545.1| PREDICTED: D-inositol 3-phosphate glycosyltransferase-like [Cucumis sativus]

 Score =  739 bits (1908), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 354/494 (71%), Positives = 408/494 (82%), Gaps = 8/494 (1%)

Query: 1   MAFNNK-PKKTNPSFWQSNLCITLFFIVIFTIPALFLLHTPTNLICPNLATNHNVNKPWS 59
           MAFN+K PKK   S    NLC TLFF+V+FT+P LFLLHT T  +C   A+   +N  W 
Sbjct: 25  MAFNSKFPKKPTVSPSHCNLCTTLFFVVLFTVPTLFLLHTSTISVCSLSASTTRLNS-WF 83

Query: 60  GDLRNAEFAWNLLSFLQNQPSKFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHR 119
           GDLR+A+F+WN L+F +++P    LKIAVFSRKWPI T PGGMERHAHTLH ALARRGHR
Sbjct: 84  GDLRDAQFSWNRLAFDEDKPPPVVLKIAVFSRKWPIGTIPGGMERHAHTLHTALARRGHR 143

Query: 120 VHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEADKWRYSKGWEQFDEENQREPF 179
           VH+FTSPV N           +  S    P +HFHEGE  +WRY+K WEQ++EEN REPF
Sbjct: 144 VHVFTSPVSNYGV------VQNLSSETSAPYIHFHEGEPGRWRYNKAWEQYEEENHREPF 197

Query: 180 DVVHSESVALPHWLARNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQGV 239
           DVVHSESVALPHWLA+ ++NLAVSWHGIALESLQS IFQDL R+P EPMS AFNK++QG 
Sbjct: 198 DVVHSESVALPHWLAKQLSNLAVSWHGIALESLQSDIFQDLARRPNEPMSPAFNKNIQGD 257

Query: 240 MLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQS 299
           + KVLNEIRFF  Y HHVAISDSCGEMLRD+YQIPS RVHVI+NG++E+++  D  LG+ 
Sbjct: 258 VPKVLNEIRFFKDYVHHVAISDSCGEMLRDMYQIPSRRVHVIVNGVDEDDFREDFKLGKE 317

Query: 300 FRSRIGIPKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKD 359
           F++RIGIP+NASLVLGVAGRLVKDKGHPLLHEAFS +  ++P+VYL+VAG+GPWEQRY+D
Sbjct: 318 FKARIGIPRNASLVLGVAGRLVKDKGHPLLHEAFSIITEQHPNVYLVVAGAGPWEQRYRD 377

Query: 360 FGHQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKG 419
            G QVLV+GSMSP+ELRAFYNAIDIFVNPTLRPQGLDLTLMEAM SGKPVMASRFPSIKG
Sbjct: 378 LGPQVLVLGSMSPSELRAFYNAIDIFVNPTLRPQGLDLTLMEAMASGKPVMASRFPSIKG 437

Query: 420 TIVVDDEFGFMFAPNVESLHKTLEAAVSEGPMRLAQRGEACRQYAASMFTANKMALAYER 479
           TIVVDDE+GFMFAPNVESL +TLEA   EG  RL QRG+ACR+YA SMFTA KMALAYER
Sbjct: 438 TIVVDDEYGFMFAPNVESLVETLEAVAKEGSDRLRQRGKACRRYATSMFTARKMALAYER 497

Query: 480 LFLCIKNETFCDYP 493
           LFLCIK+E FC+YP
Sbjct: 498 LFLCIKDEAFCNYP 511

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356560611|ref|XP_003548584.1| PREDICTED: D-inositol-3-phosphate glycosyltransferase-like [Glycine max]

 Score =  735 bits (1898), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 359/496 (72%), Positives = 411/496 (82%), Gaps = 9/496 (1%)

Query: 1   MAFNNKPKKTNPSFWQSNLCITLFFIVIFTIPALFLLHTPTNLI--CPNLATNHNVNKPW 58
           MA N    K + S     LC TLFFIV+FTIP LFLLH PT  I  C N A      K W
Sbjct: 1   MALNTTKSKNSTSPSNFYLCTTLFFIVLFTIPVLFLLHAPTTTISICTNPA------KTW 54

Query: 59  SGDLRNAEFAWNLLSFLQNQPSKFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGH 118
           SGDL+  EFAWN LSF +++P  F LK+AVFSRKWPI TTPGGMERHAHTLH ALARRGH
Sbjct: 55  SGDLQLVEFAWNRLSFFEHKPPPFALKVAVFSRKWPIGTTPGGMERHAHTLHTALARRGH 114

Query: 119 RVHIFTSPVDNINSPSISHQENDDGSNNKY-PLLHFHEGEADKWRYSKGWEQFDEENQRE 177
           ++H+FTSP D   S SIS     + +N++  P +HFHEGE  +W Y+K WEQF EEN+ E
Sbjct: 115 QIHVFTSPPDQDESISISSFSEVNKNNHQSSPYIHFHEGEPGRWHYNKAWEQFVEENKPE 174

Query: 178 PFDVVHSESVALPHWLARNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQ 237
           PFDVVHSESVALPHWLARN++NLAVSWHGIALESLQS IFQDLTR+P EPMS  FNKS+Q
Sbjct: 175 PFDVVHSESVALPHWLARNMSNLAVSWHGIALESLQSSIFQDLTRRPDEPMSPLFNKSIQ 234

Query: 238 GVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLG 297
           GV+ KVLNEIRFF  YAHHVAISDSCGEMLRDVYQIP+ RVHVILNG++E+++G D+ LG
Sbjct: 235 GVVPKVLNEIRFFRNYAHHVAISDSCGEMLRDVYQIPNTRVHVILNGVDEDDFGEDVELG 294

Query: 298 QSFRSRIGIPKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRY 357
           + FR++IGIP NASLV+GVAGRLVKDKGHPLLHEA+S+L+ K+P+VYLIVAGSGPWE RY
Sbjct: 295 REFRTKIGIPGNASLVIGVAGRLVKDKGHPLLHEAYSRLIAKHPNVYLIVAGSGPWENRY 354

Query: 358 KDFGHQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSI 417
           +D G QVLV+GSMSP+ LRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKP++ASRFPSI
Sbjct: 355 RDLGSQVLVLGSMSPSMLRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPLLASRFPSI 414

Query: 418 KGTIVVDDEFGFMFAPNVESLHKTLEAAVSEGPMRLAQRGEACRQYAASMFTANKMALAY 477
           KGTIVVDDE+G+MF+PNVESL + LEA V EGP RLA +G+A R+YAA MFTA KMALAY
Sbjct: 415 KGTIVVDDEYGYMFSPNVESLLEALEAVVKEGPQRLAMQGKASREYAAKMFTARKMALAY 474

Query: 478 ERLFLCIKNETFCDYP 493
           ERLFLCIK+ TFC YP
Sbjct: 475 ERLFLCIKDRTFCTYP 490

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357517395|ref|XP_003628986.1| Phosphatidylinositol alpha-mannosyltransferase [Medicago truncatula] gi|355523008|gb|AET03462.1| Phosphatidylinositol alpha-mannosyltransferase [Medicago truncatula]

 Score =  730 bits (1884), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 353/494 (71%), Positives = 409/494 (82%), Gaps = 13/494 (2%)

Query: 1   MAFNNKPKKTN-PSFWQSNLCITLFFIVIFTIPALFLLHTPTNLICPNLATNHNVNKPWS 59
           MA NNK KK N PS +      TL FIV+FTIPALFLLHTPT        T+H  +K WS
Sbjct: 1   MALNNKSKKPNSPSNFY--FFTTLLFIVLFTIPALFLLHTPTTSSICTTFTSHQ-SKTWS 57

Query: 60  GDLRNAEFAWNLLSFLQNQPSKFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHR 119
           GDL  AEFAWN LSF Q +     LKIAVFSRKWPI TTPGGMERHA+TLH ALA+RGH+
Sbjct: 58  GDLTLAEFAWNKLSFFQQKKPLSPLKIAVFSRKWPIGTTPGGMERHAYTLHTALAQRGHK 117

Query: 120 VHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEADKWRYSKGWEQFDEENQREPF 179
           VHIFTSP D     SI  Q+        YP +HFHEGE+DKWRY+K  EQ+ EEN++EPF
Sbjct: 118 VHIFTSPQDE--KTSIKTQQG-------YPFIHFHEGESDKWRYNKALEQYQEENKKEPF 168

Query: 180 DVVHSESVALPHWLARNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQGV 239
           DV+HSESVALPH++ARN++NL VSWHGIALESLQS IFQDL R+P EP+S  FN SLQG+
Sbjct: 169 DVIHSESVALPHYVARNLSNLVVSWHGIALESLQSSIFQDLARRPDEPISPLFNNSLQGI 228

Query: 240 MLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQS 299
           + KVLNEIRFF  YAHHVAISDSCGEMLRD YQIP+ RVHVI+NG++E+E+G D  LG+ 
Sbjct: 229 VPKVLNEIRFFKSYAHHVAISDSCGEMLRDFYQIPTRRVHVIVNGVDEDEFGEDAELGRK 288

Query: 300 FRSRIGIPKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKD 359
           FR++IGIP NASLVLGVAGRLVKDKGHPLLHEA+SKL+ K+P+VYLI+AGSGPW  RYKD
Sbjct: 289 FRTKIGIPSNASLVLGVAGRLVKDKGHPLLHEAYSKLITKHPNVYLIIAGSGPWGNRYKD 348

Query: 360 FGHQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKG 419
            G+QVLV+GSMSP+ L+AFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKP++ASRFPSIKG
Sbjct: 349 LGNQVLVLGSMSPSMLKAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPLLASRFPSIKG 408

Query: 420 TIVVDDEFGFMFAPNVESLHKTLEAAVSEGPMRLAQRGEACRQYAASMFTANKMALAYER 479
           T++VDDE+G+MF+PNVESL + L+A V +GP RLA+RG+ACR+YAASMFTA KMALAYER
Sbjct: 409 TLLVDDEYGYMFSPNVESLLEALQAVVKDGPQRLARRGKACREYAASMFTAKKMALAYER 468

Query: 480 LFLCIKNETFCDYP 493
           LFLCIK+ TFC YP
Sbjct: 469 LFLCIKDSTFCIYP 482

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225427673|ref|XP_002271072.1| PREDICTED: uncharacterized protein LOC100252842 [Vitis vinifera]

 Score =  703 bits (1815), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 343/499 (68%), Positives = 400/499 (80%), Gaps = 12/499 (2%)

Query: 1   MAFNNKPKKTNPSFW--QSNLCITLFFIVIFTIPALFLLHTPTNLICPNLATNHNVNKPW 58
           MA N KPKK    F   Q++L  TLFFIV+FTIPAL LLH P+  I    +++ +   PW
Sbjct: 1   MAPNTKPKK---GFLPPQTSLTTTLFFIVLFTIPALLLLHAPSTSISNTFSSHAS---PW 54

Query: 59  SGDLRNAEFAWNLLSFLQNQPSKFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGH 118
           +GDLR AEFAWN L    ++     LKIAVFSRKWPI T PGGMERHAHTLH AL+RRGH
Sbjct: 55  TGDLRVAEFAWNRLELGGSRAPPVVLKIAVFSRKWPIGTAPGGMERHAHTLHTALSRRGH 114

Query: 119 RVHIFTSPVDNINSPSISHQEN---DDGSNNKYPLLHFHEGEADKWRYSKGWEQFDEENQ 175
           RVHIFTSP  +    +   + N   +    +  P +H HEGE  +WRY+K WEQF EEN+
Sbjct: 115 RVHIFTSPPGDQRGAAALQEMNMQPNGTPTSSSPRIHCHEGEPGRWRYNKAWEQFVEENR 174

Query: 176 REPFDVVHSESVALPHWLARNVTNLAVSWHGIALESLQSGIFQDLT-RKPLEPMSLAFNK 234
           ++PFDVVHSESVALPHWLA+ + NLAVSWHGIALESL S ++QDL  R P EP+S  FN+
Sbjct: 175 QDPFDVVHSESVALPHWLAKTLPNLAVSWHGIALESLSSDLYQDLALRPPGEPISPGFNR 234

Query: 235 SLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDL 294
           S+QGV+ KVLNEIRFF+ YAHHVAISDSCGEMLRDVYQIP++RVHVILNG++E ++  DL
Sbjct: 235 SVQGVIPKVLNEIRFFHNYAHHVAISDSCGEMLRDVYQIPTKRVHVILNGVDEEDFRQDL 294

Query: 295 SLGQSFRSRIGIPKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWE 354
            LG  FRSRIGIP+NASLVLGVAGRLVKDKGHP+LHEAFS+ + ++PD YLI AGSGPWE
Sbjct: 295 ELGHQFRSRIGIPQNASLVLGVAGRLVKDKGHPILHEAFSRFIKRHPDAYLIAAGSGPWE 354

Query: 355 QRYKDFGHQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRF 414
            RYKD G QVLV+GSM+P++LRAFYN+ID+FVNPTLRPQGLDLTLMEAMMSGK V+ASRF
Sbjct: 355 NRYKDLGRQVLVLGSMNPSQLRAFYNSIDVFVNPTLRPQGLDLTLMEAMMSGKAVLASRF 414

Query: 415 PSIKGTIVVDDEFGFMFAPNVESLHKTLEAAVSEGPMRLAQRGEACRQYAASMFTANKMA 474
           PSIKGTIVVDDE+GFMF+PNVESL + +E  V EG  RLAQRG+ACR YA SMFTA KMA
Sbjct: 415 PSIKGTIVVDDEYGFMFSPNVESLLEAMEQVVKEGRRRLAQRGKACRIYATSMFTATKMA 474

Query: 475 LAYERLFLCIKNETFCDYP 493
           LAYER+FLCIKNETFC YP
Sbjct: 475 LAYERMFLCIKNETFCMYP 493

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357484533|ref|XP_003612554.1| Capsular polysaccharide biosynthesis glycosyltransferase capM [Medicago truncatula] gi|355513889|gb|AES95512.1| Capsular polysaccharide biosynthesis glycosyltransferase capM [Medicago truncatula]

 Score =  692 bits (1785), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 347/497 (69%), Positives = 397/497 (79%), Gaps = 15/497 (3%)

Query: 1   MAFNNKPKKTN-PSFWQSNLCITLFFIVIFTIPALFLLHTPT-NLICPNLATNHNVNKPW 58
           MAFNNK KKTN PS +  N CITLF I  F IP  FLL+  T N  C NL       K +
Sbjct: 1   MAFNNKSKKTNSPSHF--NFCITLFSISFFIIPTFFLLNNSTSNSKCTNLT------KTF 52

Query: 59  SGDLRNAEFAWNLLSFLQN-QPSKFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRG 117
           SGDLR+AEF+WN LSF Q+  PS   LKIAVFSRKWP+ T PGGMERHAHTL+ ALARRG
Sbjct: 53  SGDLRSAEFSWNSLSFSQHGNPSPVILKIAVFSRKWPMGTVPGGMERHAHTLYTALARRG 112

Query: 118 HRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEADKWRYSKGWEQFDEENQR- 176
           H+VH+FTSP ++    + +        +   P +HFHEGE  KWRY+K +E F EENQR 
Sbjct: 113 HQVHVFTSPSED---KTTTTTSISSKGSPSSPYIHFHEGEPGKWRYNKAFELFLEENQRD 169

Query: 177 EPFDVVHSESVALPHWLARNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSL 236
           +PFDVVHSESVALPHWLA+++ NL VSWHGIALESLQS IFQDL R P EP S  F K L
Sbjct: 170 QPFDVVHSESVALPHWLAKDLPNLVVSWHGIALESLQSSIFQDLARLPDEPRSQDFEKGL 229

Query: 237 QGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSL 296
           QGV+ KVLNEIRFFNKY+HHVAISDSCGEMLRDVYQIPS RVHVILNG++E ++  D  L
Sbjct: 230 QGVVPKVLNEIRFFNKYSHHVAISDSCGEMLRDVYQIPSRRVHVILNGVDEEDFREDAEL 289

Query: 297 GQSFRSRIGIPKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQR 356
           G+ FR++IGIP NASLV GVAGRLVKDKGHPLLHEAFS+L+ KY +VYLIVAGSGPWE R
Sbjct: 290 GKEFRTKIGIPSNASLVFGVAGRLVKDKGHPLLHEAFSRLITKYTNVYLIVAGSGPWENR 349

Query: 357 YKDFGHQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPS 416
           YKD G+QVLV+GSM+P+ LRAFYNAIDIFVNPTLRPQGLDLTLMEAMM GKP++ASRFPS
Sbjct: 350 YKDIGNQVLVLGSMNPSMLRAFYNAIDIFVNPTLRPQGLDLTLMEAMMIGKPLLASRFPS 409

Query: 417 IKGTIVVDDEFGFMFAPNVESLHKTLEAAVSEGPMRLAQRGEACRQYAASMFTANKMALA 476
           IKG+I+VDDEFG+MF+PNV+SL + LE  V +G  RL +RG ACR+YA SMFTA KMALA
Sbjct: 410 IKGSILVDDEFGYMFSPNVDSLLEELEQVVKDGKERLERRGNACREYANSMFTAKKMALA 469

Query: 477 YERLFLCIKNETFCDYP 493
           YERLFLCIK +TFC YP
Sbjct: 470 YERLFLCIKRDTFCTYP 486

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	493
TAIR|locus:2122920	516	AT4G19460 [Arabidopsis thalian	0.985	0.941	0.646	8.2e-170
TAIR|locus:2032702	486	AT1G73160 [Arabidopsis thalian	0.959	0.973	0.457	1.8e-112
TAIR|locus:2153281	505	AT5G59070 [Arabidopsis thalian	0.845	0.825	0.450	6.1e-94
TIGR_CMR|CPS_5001	365	CPS_5001 "glycosyl transferase	0.549	0.742	0.215	1.5e-11
TIGR_CMR|CPS_4999	367	CPS_4999 "glycosyl transferase	0.486	0.653	0.263	3.4e-11
UNIPROTKB|O07147	374	pimA "GDP-mannose-dependent al	0.484	0.639	0.266	2.4e-09
TIGR_CMR|CBU_0838	366	CBU_0838 "glycosyl transferase	0.296	0.398	0.320	2.8e-09
TIGR_CMR|GSU_1511	373	GSU_1511 "glycosyl transferase	0.324	0.428	0.269	1.4e-08
UNIPROTKB|O53279	414	MT3116 "Glycogen synthase" [My	0.352	0.420	0.276	3.3e-08
UNIPROTKB|A0R043	382	pimB "GDP-mannose-dependent al	0.375	0.484	0.291	1e-07

TAIR|locus:2122920 AT4G19460 [Arabidopsis thaliana (taxid:3702)]

 Score = 1651 (586.2 bits), Expect = 8.2e-170, P = 8.2e-170
 Identities = 323/500 (64%), Positives = 389/500 (77%)

Query:     1 MAFNNKPKKTNPSFWQSNLCITLFFIVIFTIPALFLLHTPT--NLICPNLATNHNVNKP- 57
             MA   K KK N  F   +LC  LFF V+FTIPALFLL T T  +      +++ + N+P 
Sbjct:    24 MASQTKLKKPNSHF---SLCTFLFFTVLFTIPALFLLRTSTCSSSTAAVSSSSSDTNQPP 80

Query:    58 WSGDLRNAEFAWNLLSF-LQNQPSKFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARR 116
             WSGDL+ A+FAWN L F L N P K TLK+AVFSRKWP    PGGMERHA TL+ ALARR
Sbjct:    81 WSGDLQTAQFAWNRLDFSLTNPPPK-TLKLAVFSRKWPTGPNPGGMERHAFTLYTALARR 139

Query:   117 GHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFH-EGEADKWRYSKGWEQFDEENQ 175
             GHRVH+FTSP+D   SP  +++         YP++H H + E  KWRY+K WE + EEN+
Sbjct:   140 GHRVHVFTSPLDQ--SPE-TNKIPPVSDQIIYPIIHSHGDAEPGKWRYNKAWELYQEENK 196

Query:   176 REPFDVVHSESVALPHWLARNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKS 235
             +EPFD VHSESVALPHW+AR V NLAVSWHGIALESLQS I+QDL RKP EP S  FN S
Sbjct:   197 KEPFDAVHSESVALPHWIAREVPNLAVSWHGIALESLQSSIYQDLIRKPDEPRSQGFNAS 256

Query:   236 LQGVML-KVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDL 294
             L G +L K+L+EIRFF+ YAHH+AISDSCGEMLRDVYQIP +RVHVILNG++EN +  D 
Sbjct:   257 LYGAVLPKILDEIRFFHNYAHHIAISDSCGEMLRDVYQIPEKRVHVILNGVDENGFTSDK 316

Query:   295 SLGQSFRSRIGIPKNAS-LVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPW 353
              L   FRS++G+P+N+S +VLG AGRLVKDKGHPLL EAF+K++  Y +VYL+VAGSGPW
Sbjct:   317 KLRTLFRSKLGLPENSSAIVLGAAGRLVKDKGHPLLFEAFAKIIQTYSNVYLVVAGSGPW 376

Query:   354 EQRYKDFGHQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASR 413
             EQRYK+ G +V ++GS++P EL+ FYN ID+FVNPTLRPQGLDLTLMEAM+SGKPVMASR
Sbjct:   377 EQRYKELGEKVSILGSLNPNELKGFYNGIDLFVNPTLRPQGLDLTLMEAMLSGKPVMASR 436

Query:   414 FPSIKGTIVVDDEFGFMFAPNVESLHKTLEAAVSEGPMRLAQRGEACRQYAASMFTANKM 473
             + SIK TIVV+DEFGFMFAPNVE+L   +E AV+EG  RLA+RG  C++YAA MFTA+KM
Sbjct:   437 YASIKRTIVVNDEFGFMFAPNVEALTAVMEVAVAEGAERLAERGRKCKEYAAEMFTASKM 496

Query:   474 ALAYERLFLCIKNETFCDYP 493
             ALAYERLFLCI ++ FC YP
Sbjct:   497 ALAYERLFLCINDQKFCIYP 516

GO:0005634 "nucleus" evidence=ISM

GO:0009058 "biosynthetic process" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0001666 "response to hypoxia" evidence=RCA

GO:0019375 "galactolipid biosynthetic process" evidence=RCA

TAIR|locus:2032702 AT1G73160 [Arabidopsis thaliana (taxid:3702)]

 Score = 1110 (395.8 bits), Expect = 1.8e-112, P = 1.8e-112
 Identities = 229/501 (45%), Positives = 322/501 (64%)

Query:     1 MAFNNKPKKTNPSFWQSNLCITLFFIVIFTIPALFL--LHTPTNLICPNLATNHNVNKPW 58
             MAF N   +T  S   S+   +  F  I T+  +F    +   +    +  T+   N P+
Sbjct:     1 MAFKNHSSRTTLSS-SSSTSFSFRFTTIITLAFIFCSSYYIFFSQFDYSPVTSSPENPPF 59

Query:    59 SGDLRNAEFAWNLLSFLQNQPSKFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGH 118
             +GDLR+  F WN LS     P    LK+AVF + WP+ + PGGMERHA+TL+ +LA RGH
Sbjct:    60 AGDLRDLTFPWNKLSL---GPISEKLKLAVFCKSWPVGSIPGGMERHAYTLYTSLASRGH 116

Query:   119 RVHIFTSPVDNINSPSISHQENDDGSNNKYPL-LHFHEGEADKWRYSKGWEQFDEENQRE 177
              +H+FT   D         + N +   NK  L ++F   E     +S+ +E F + N  +
Sbjct:   117 EIHVFTVSSD---------RSNREEYYNKGDLHVYFAPNEHGSLNHSRAFEIFHKINSLD 167

Query:   178 --PFDVVHSESVALPHWLARNVTN--LAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFN 233
                FD VH+ESV+LPHW  + V N  +AV+WHGI  E + S +FQ+L+     P S    
Sbjct:   168 HHSFDYVHTESVSLPHWRVKMVPNGDIAVTWHGIWYEIMHSNLFQELSND--RPSS---- 221

Query:   234 KSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVD 293
               LQ  M ++++EIRFF KY  H+ IS+S  E+L ++YQ+P  +VHVI+NG+++ ++   
Sbjct:   222 -DLQQTMPRLVDEIRFFPKYKQHICISNSAREVLVNIYQLPKRKVHVIVNGVDQTKFVYS 280

Query:   294 LSLGQSFRSRIGIPKNAS-LVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGP 352
                G  FR++ GIP N + +V+GV+GRLV+DKGHPLL+EAF+ L+  +P VYL+VAGSGP
Sbjct:   281 PESGARFRAKHGIPDNGTYIVMGVSGRLVRDKGHPLLYEAFALLVKMHPKVYLLVAGSGP 340

Query:   353 WEQRYKDFGHQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMAS 412
             W +RY + G  V V+G++ P EL  FYNA+D+FVNPTLRPQGLDLT++EAM  GKPV+A 
Sbjct:   341 WGKRYAELGENVRVLGALEPEELSGFYNALDVFVNPTLRPQGLDLTIIEAMQCGKPVVAP 400

Query:   413 RFPSIKGTIVVDDEFGFMFAPNVESLHKTLEAAVSEGPMRLAQRGEACRQYAASMFTANK 472
              +PSI GT+VVD+ FG+ F+PNV SL +TL++ V +GP  L  +G AC+ YA SMFTA +
Sbjct:   401 NYPSIVGTVVVDERFGYTFSPNVRSLVETLDSVVRDGPRVLEMKGIACKGYALSMFTATQ 460

Query:   473 MALAYERLFLCIKNETFCDYP 493
             MA AYER F+C+KNE +C YP
Sbjct:   461 MASAYERFFMCMKNERYCRYP 481

GO:0009058 "biosynthetic process" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0001666 "response to hypoxia" evidence=RCA

GO:0019375 "galactolipid biosynthetic process" evidence=RCA

TAIR|locus:2153281 AT5G59070 [Arabidopsis thaliana (taxid:3702)]

 Score = 935 (334.2 bits), Expect = 6.1e-94, P = 6.1e-94
 Identities = 203/451 (45%), Positives = 282/451 (62%)

Query:    61 DLRNAEFAWNLLSFLQNQPSKFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRV 120
             DL     AWN L+F  ++P K TLKIAV  +KWP  +  GG+ERHA TLH+ALA RGH +
Sbjct:    64 DLLRFSSAWNHLTF-PSKPKK-TLKIAVVVKKWPRKSQAGGLERHALTLHLALANRGHEL 121

Query:   121 HIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEADKWR-YSKGWEQFDEENQR-EP 178
             H+FT+      SPS    +       K  + H  E  A  +   +   +Q   +N    P
Sbjct:   122 HVFTAA-----SPSFPEYQL------KNLMFHLSEPTAAGYLDQASVSQQLQTQNASGRP 170

Query:   179 FDVVHSESVALPHWLARNVTNLAVSWHGIALESLQSGIFQDLTRKP-LEPMSLAFNKSLQ 237
             FDV+H+ESV L H  A+N+ N+  SWHGIA E+  S I Q+L R+  +   + A  +  Q
Sbjct:   171 FDVIHTESVGLLHTRAKNLRNVVASWHGIAYETFHSDIIQELLRQADIAAATAAGTEEEQ 230

Query:   238 ----GVML-----KVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINEN 288
                    L     +V+ E++FF +YAHHVA SD CG++L+ +Y IP ERVH+ILNG++EN
Sbjct:   231 PPPSSPALTERAKRVVEEVKFFQRYAHHVATSDHCGDVLKRIYMIPEERVHIILNGVDEN 290

Query:   289 EYGVDLSLGQSFRSRIGIP----KNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPD-- 342
              +  D+S  +SFR + G+     K + LVLG+AGRLV+DKGHPL+  A  ++  +  +  
Sbjct:   291 VFKPDVSKRESFREKFGVRSGKNKKSPLVLGIAGRLVRDKGHPLMFSALKRVFEENKEAR 350

Query:   343 --VYLIVAGSGPWEQRYKDFGH-QVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTL 399
               V ++VAG GPW  RYKD G   V+V+G +   +L  FYNAID+FVNPTLR QGLD TL
Sbjct:   351 ENVVVLVAGDGPWGNRYKDLGSTNVIVLGPLDQEKLAGFYNAIDVFVNPTLRAQGLDHTL 410

Query:   400 MEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAPNVESLHKTLEAAVSEGPMRLAQRGEA 459
             +EAM+SGKPV+A+R  SI G++VV    G+ F+PNVESL + +   VS+G   L ++G+ 
Sbjct:   411 LEAMVSGKPVLATRLASITGSVVVGPHLGYTFSPNVESLTEAILRVVSDGTEELQRKGKE 470

Query:   460 CRQYAASMFTANKMALAYERLFLCIKNETFC 490
              R+ +  +FTA KMA +YER FLCI ++ FC
Sbjct:   471 ARERSLRLFTATKMADSYERFFLCISDQRFC 501

GO:0005886 "plasma membrane" evidence=ISM

GO:0009058 "biosynthetic process" evidence=IEA;ISS

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0001666 "response to hypoxia" evidence=RCA

GO:0019375 "galactolipid biosynthetic process" evidence=RCA

GO:0005768 "endosome" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

TIGR_CMR|CPS_5001 CPS_5001 "glycosyl transferase, group 1 family protein" [Colwellia psychrerythraea 34H (taxid:167879)]

 Score = 185 (70.2 bits), Expect = 1.5e-11, P = 1.5e-11
 Identities = 61/283 (21%), Positives = 133/283 (46%)

Query:   207 IALESLQSGIFQDLTRKPLEPMSLAFNKSLQGVMLKVLN-EIRFFN-KYAHHVAISDSCG 264
             I   +LQ+  F  +  K L    +   K  Q +    L  +I +F  + +  + +S    
Sbjct:    87 IHCHNLQAHFFGGICAKLLPKTRVVLTKHGQHIPTSGLTTKINYFTLQKSKIIGVSADIT 146

Query:   265 EMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVAGRLVKDK 324
             ++++         +  I NG++   +   +   +  + ++ I ++   V G+  RL + K
Sbjct:   147 QIMQQWIAKNKSPIEYIANGVSLTAFKEQIPK-ELAKEKLSISQSTFCV-GIVARLSEPK 204

Query:   325 GHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDF---GHQVLVMGSMSPA-ELRAFYN 380
              H LL +A + +   +PD+ LI+ G GP + + + +    H   ++  +    ++    N
Sbjct:   205 DHLLLIDAIAAISKTFPDIKLIIVGGGPLQNKIETYIKANHLENIVTMLGERKDIANILN 264

Query:   381 AIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAPNVES-LH 439
             A+D+F   T   +G+ +T++EAM +  PV+A+    I   +V+++E G +     ++ L 
Sbjct:   265 ALDVFAL-TSSSEGIPMTILEAMAANLPVIATNVGGIP-QVVLNNETGILVENKDKAGLI 322

Query:   440 KTLEAAVSEGPMRLAQRGEACRQYAASMFTANKMALAYERLFL 482
               +E+ + + P +L + G+  R    S ++ N+    YE ++L
Sbjct:   323 TAIESFI-KSPKKLTEYGKQGRLLLESNYSINQAIEKYECIYL 364

GO:0000271 "polysaccharide biosynthetic process" evidence=ISS

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

TIGR_CMR|CPS_4999 CPS_4999 "glycosyl transferase, group 1 family protein" [Colwellia psychrerythraea 34H (taxid:167879)]

 Score = 182 (69.1 bits), Expect = 3.4e-11, P = 3.4e-11
 Identities = 69/262 (26%), Positives = 125/262 (47%)

Query:   232 FNKS-LQGVMLKVLNE-IRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNG-INEN 288
             F++S L      ++N+ I+ F   +H VA+S     +L +  ++P  + HV+  G + E 
Sbjct:   111 FHRSDLSKYQPNMVNKLIKLFA--SHFVAVSHDRLSLLTNNLKLPLNKCHVVHGGSVIEK 168

Query:   289 EYGVDLSLGQSFRSRIGIPKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVA 348
             +  V  S+ ++ R+ +GIP +  ++L + G L + KGH     A SK     P ++L +A
Sbjct:   169 KPTVT-SINKA-RADLGIPLDQLMLLSI-GHLGEIKGHQDTLVALSKFTKTMPALHLYIA 225

Query:   349 GSGPWEQRYK--------DFGHQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLM 400
             G G  +++ K             V  +G ++ A   ++  A DIF+ P++  +   L  +
Sbjct:   226 GDGAAQEKQKLTELVNKLQINENVTFLGQINNAF--SWLEACDIFIQPSVE-EAFGLVFV 282

Query:   401 EAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAPNV-ESLHKTLEAAVSEGPMRLAQRGEA 459
             EA    KPV+A+    IK  I+V  E G +  P+  +++   L   ++  P+R  Q GE 
Sbjct:   283 EAGAKAKPVIATTVGGIK-EIIVSKETGLLVLPSSPKAVEHALAILINSPPLR-QQYGEN 340

Query:   460 CRQYAASMFTANKMALAYERLF 481
               +     F+   M   Y  +F
Sbjct:   341 GYKRITEHFSLTNMVNKYTDIF 362

GO:0000271 "polysaccharide biosynthetic process" evidence=ISS

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

UNIPROTKB|O07147 pimA "GDP-mannose-dependent alpha-(1-2)-phosphatidylinositol mannosyltransferase" [Mycobacterium leprae TN (taxid:272631)]

 Score = 145 (56.1 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
 Identities = 70/263 (26%), Positives = 118/263 (44%)

Query:   227 PMSLAFNKSL-QGVMLKVLNEIR--FFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILN 283
             P+   F+ S  + + L V   +   +  K    +A+SD       +   + S+ V  I N
Sbjct:   112 PIVATFHTSTTKSLTLSVFQGVLRPWHEKIIGRIAVSDLARRWQMEA--LGSDAVE-IPN 168

Query:   284 GINENEYGVDLSLGQSFRSRIGIPKNASLVLGVAGRLVKD-KGHPLLHEAFSKLMVKYPD 342
             G+N     VD SL  S     G P+    VL + GR  +  KG  +L +A   +M  + D
Sbjct:   169 GVN-----VD-SLS-SAPQLAGYPRLGKTVLFL-GRYDEPRKGMSVLLDALPGVMECFDD 220

Query:   343 VYLIVAGSGPWEQRYKDFG---HQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTL 399
             V L++ G G  EQ     G     +  +G +  A   A   + D++  P +  +   + L
Sbjct:   221 VQLLIVGRGDEEQLRSQAGGLVEHIRFLGQVDDAGKAAAMRSADVYCAPNIGGESFGIVL 280

Query:   400 MEAMMSGKPVMASRFPSIKGTIVVDDEFGFMF-APNVESLHKTLEAAVSEGPMR---LAQ 455
             +EAM +G PV+AS   + +  ++ D E G +  A +  +L   L A +    +R   +A 
Sbjct:   281 VEAMAAGTPVVASDLDAFR-RVLRDGEVGHLVPAGDSAALADALVALLRNDVLRERYVAA 339

Query:   456 RGEACRQYAASMFTANKMALAYE 478
               EA R+Y  S+  A+++   YE
Sbjct:   340 GAEAVRRYDWSV-VASQIMRVYE 361

GO:0004377 "GDP-Man:Man3GlcNAc2-PP-Dol alpha-1,2-mannosyltransferase activity" evidence=ISS

GO:0009247 "glycolipid biosynthetic process" evidence=ISS

GO:0043750 "phosphatidylinositol alpha-mannosyltransferase activity" evidence=ISS

GO:0046488 "phosphatidylinositol metabolic process" evidence=ISS

TIGR_CMR|CBU_0838 CBU_0838 "glycosyl transferase, group 1 family protein" [Coxiella burnetii RSA 493 (taxid:227377)]

 Score = 165 (63.1 bits), Expect = 2.8e-09, P = 2.8e-09
 Identities = 50/156 (32%), Positives = 80/156 (51%)

Query:   313 VLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDFG-----HQVLVM 367
             +L V GRL  +KGH +L  AFSK + ++P   L++ G G    + K F       + ++ 
Sbjct:   193 ILAV-GRLSYEKGHDILLSAFSKFIHQFPQWRLVIVGDGELRNKLKQFAVNLNIDKYIIW 251

Query:   368 GSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEF 427
             G M   ++ ++YNA  IFV P+ R +G    L+EAM  G PV+ S   S     V ++E 
Sbjct:   252 GGMQ-LDIFSYYNAATIFVMPS-RYEGTPNALLEAMGCGLPVIVSNASSGILQFVKNEET 309

Query:   428 GFMF-APNVESLHKTLEAAVSEGPMRLAQRGEACRQ 462
             G +    +VE+L+       ++  +R  + GE  RQ
Sbjct:   310 GLVVPVEDVETLYLAFCRLANDELLR-KRLGEKARQ 344

GO:0009103 "lipopolysaccharide biosynthetic process" evidence=ISS

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

TIGR_CMR|GSU_1511 GSU_1511 "glycosyl transferase, group 1 family protein" [Geobacter sulfurreducens PCA (taxid:243231)]

 Score = 159 (61.0 bits), Expect = 1.4e-08, P = 1.4e-08
 Identities = 46/171 (26%), Positives = 81/171 (47%)

Query:   251 NKYAH-----HVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIG 305
             N+Y H      + IS+     ++  Y +   +  +I NG++   +  D SL   FR+ +G
Sbjct:   131 NRYVHPFIDKSIVISEHLLSYIKRSYSVDPGKFIIIRNGVDTTRFKKDSSLKGIFRNELG 190

Query:   306 IPKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDFGHQVL 365
             +P N  L+ G  GR  + K   +  +    L+ K  +VY  +AG G    + K     + 
Sbjct:   191 VPANFPLI-GYIGRFSRQKRPDVFLDVAKHLLGKLGEVYFYMAGDGDLLDKSKKLADSLG 249

Query:   366 VMGSMS---PAE-LRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMAS 412
             +   +S   P + +    N+ D+ V  T   +G  LT++EA+ +G PV+AS
Sbjct:   250 ISNRVSFVAPRDDIHIVLNSTDMLVL-TSSYEGAPLTILEALATGVPVVAS 299

GO:0000271 "polysaccharide biosynthetic process" evidence=ISS

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

UNIPROTKB|O53279 MT3116 "Glycogen synthase" [Mycobacterium tuberculosis (taxid:1773)]

 Score = 128 (50.1 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
 Identities = 52/188 (27%), Positives = 82/188 (43%)

Query:   307 PKNASLVLGVAGRLVKDKG-HPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDFG--HQ 363
             P+     L   GRL  +KG H  +  A  +L   +P   L +AG G  +    D    H+
Sbjct:   212 PRTGPAELLYVGRLEYEKGVHDAI-AALPRLRRTHPGTTLTIAGEGTQQDWLIDQARKHR 270

Query:   364 VL----VMGSMSPAELRAFYNAIDIFVNPT-LRPQGLDLTLMEAMMSGKPVMASRFPSIK 418
             VL     +G +   EL A  +  D  V P+   P GL    +EA  +G P++ S    + 
Sbjct:   271 VLRATRFVGHLDHTELLALLHRADAAVLPSHYEPFGL--VALEAAAAGTPLVTSNIGGL- 327

Query:   419 GTIVVDDEFGFMFAP-NVESLHKTLEAAVSEGPMRLAQRGEACRQYAASMFTANKMALAY 477
             G  V++ + G   AP +V  L   + + + + P    +R  A RQ   S F    +A A 
Sbjct:   328 GEAVINGQTGVSCAPRDVAGLAAAVRSVLDD-PAAAQRRARAARQRLTSDFDWQTVATAT 386

Query:   478 ERLFLCIK 485
              +++L  K
Sbjct:   387 AQVYLAAK 394

GO:0005978 "glycogen biosynthetic process" evidence=IMP

GO:0009103 "lipopolysaccharide biosynthetic process" evidence=IMP

GO:0040007 "growth" evidence=IMP

UNIPROTKB|A0R043 pimB "GDP-mannose-dependent alpha-(1-6)-phosphatidylinositol monomannoside mannosyltransferase" [Mycobacterium smegmatis str. MC2 155 (taxid:246196)]

 Score = 140 (54.3 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
 Identities = 60/206 (29%), Positives = 91/206 (44%)

Query:   274 PSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVAGRLVKDKGHPLLHEAF 333
             PS  +  +  G++ + +  D       R R G+     +V     RLV  KG  +L  A 
Sbjct:   157 PSAALEHLPPGVDTDRFAPDPDARARMRERYGLGDRPVVVC--LSRLVPRKGQDMLIRAL 214

Query:   334 SKLMVKYPDVYLIVAGSGPW-E--QRY-KDFG---HQVLVMGSMSPAE-LRAFYNAIDIF 385
              +L  + PD  L + G GP+ E  QR   D G   H V   G   PAE L A +   D+F
Sbjct:   215 PELRRRVPDTALAIVGGGPYLETLQRMASDLGVAEHVVFTRGI--PAEELPAHHAMADVF 272

Query:   386 VNPT------LRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMF-APNVESL 438
               P       L  +GL +  +EA   G PV+A R      T V+D + G +    +V+++
Sbjct:   273 AMPCRTRGAGLDVEGLGIVYLEASACGVPVVAGRSGGAPET-VLDGKTGTVVDGTDVDAI 331

Query:   439 HKTLEAAVSEGPMRLAQRGEACRQYA 464
                +   +++ P R A  G A R +A
Sbjct:   332 TTAVGDLLAD-PRRAAAMGVAGRHWA 356

GO:0009247 "glycolipid biosynthetic process" evidence=IDA

GO:0033164 "glycolipid 6-alpha-mannosyltransferase activity" evidence=IDA

GO:0043750 "phosphatidylinositol alpha-mannosyltransferase activity" evidence=IDA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.4.1	0.691

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: eugene3.00030779 hypothetical protein (489 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	493
cd03801	374	cd03801, GT1_YqgM_like, This family is most closel	4e-64
cd03798	377	cd03798, GT1_wlbH_like, This family is most closel	6e-41
cd03817	374	cd03817, GT1_UGDG_like, This family is most closel	3e-34
COG0438	381	COG0438, RfaG, Glycosyltransferase [Cell envelope	4e-32
cd03807	365	cd03807, GT1_WbnK_like, This family is most closel	8e-31
cd03811	353	cd03811, GT1_WabH_like, This family is most closel	7e-30
cd03799	355	cd03799, GT1_amsK_like, This is a family of GT1 gl	1e-29
cd03821	375	cd03821, GT1_Bme6_like, This family is most closel	2e-26
cd03808	359	cd03808, GT1_cap1E_like, This family is most close	8e-26
pfam00534	158	pfam00534, Glycos_transf_1, Glycosyl transferases	2e-25
cd03795	357	cd03795, GT1_like_4, This family is most closely r	7e-22
cd03819	355	cd03819, GT1_WavL_like, This family is most closel	4e-21
cd03814	364	cd03814, GT1_like_2, This family is most closely r	7e-21
cd03823	359	cd03823, GT1_ExpE7_like, This family is most close	9e-21
cd03802	335	cd03802, GT1_AviGT4_like, This family is most clos	2e-20
cd03800	398	cd03800, GT1_Sucrose_synthase, This family is most	2e-20
cd05844	367	cd05844, GT1_like_7, Glycosyltransferases catalyze	4e-20
cd04951	360	cd04951, GT1_WbdM_like, This family is most closel	6e-20
cd03794	394	cd03794, GT1_wbuB_like, This family is most closel	3e-19
cd03820	348	cd03820, GT1_amsD_like, This family is most closel	4e-19
cd03809	365	cd03809, GT1_mtfB_like, This family is most closel	6e-19
cd03825	365	cd03825, GT1_wcfI_like, This family is most closel	6e-18
TIGR03088	374	TIGR03088, stp2, sugar transferase, PEP-CTERM/EpsH	1e-17
cd01635	229	cd01635, Glycosyltransferase_GTB_type, Glycosyltra	4e-14
cd03812	358	cd03812, GT1_CapH_like, This family is most closel	4e-14
pfam13692	134	pfam13692, Glyco_trans_1_4, Glycosyl transferases	5e-14
TIGR04157	406	TIGR04157, glyco_rSAM_CFB, glycosyltransferase, GG	6e-14
PRK15484	380	PRK15484, PRK15484, lipopolysaccharide 1,2-N-acety	2e-13
TIGR02149	388	TIGR02149, glgA_Coryne, glycogen synthase, Coryneb	2e-13
TIGR04063	397	TIGR04063, stp3, PEP-CTERM/exosortase A-associated	1e-12
pfam13439	171	pfam13439, Glyco_transf_4, Glycosyltransferase Fam	3e-12
cd03822	366	cd03822, GT1_ecORF704_like, This family is most cl	4e-12
cd04962	371	cd04962, GT1_like_5, This family is most closely r	1e-10
cd03804	351	cd03804, GT1_wbaZ_like, This family is most closel	4e-10
TIGR04047	373	TIGR04047, MSMEG_0565_glyc, glycosyltransferase, M	4e-10
pfam13579	158	pfam13579, Glyco_trans_4_4, Glycosyl transferase 4	3e-09
cd04955	363	cd04955, GT1_like_6, This family is most closely r	3e-09
TIGR03999	374	TIGR03999, thiol_BshA, N-acetyl-alpha-D-glucosamin	6e-09
PLN02871	465	PLN02871, PLN02871, UDP-sulfoquinovose:DAG sulfoqu	1e-07
TIGR02095	473	TIGR02095, glgA, glycogen/starch synthase, ADP-glu	1e-07
cd03796	398	cd03796, GT1_PIG-A_like, This family is most close	1e-07
cd03791	476	cd03791, GT1_Glycogen_synthase_DULL1_like, This fa	2e-07
TIGR03449	405	TIGR03449, mycothiol_MshA, D-inositol-3-phosphate	6e-07
PRK15427	406	PRK15427, PRK15427, colanic acid biosynthesis glyc	8e-06
TIGR04005	406	TIGR04005, wcaL, colanic acid biosynthesis glycosy	2e-05
cd04949	372	cd04949, GT1_gtfA_like, This family is most closel	5e-05
PRK15179	694	PRK15179, PRK15179, Vi polysaccharide biosynthesis	2e-04
COG0297	487	COG0297, GlgA, Glycogen synthase [Carbohydrate tra	3e-04
cd03813	475	cd03813, GT1_like_3, This family is most closely r	3e-04
cd03792	372	cd03792, GT1_Trehalose_phosphorylase, Trehalose ph	4e-04
cd04946	407	cd04946, GT1_AmsK_like, This family is most closel	4e-04
PHA01633	335	PHA01633, PHA01633, putative glycosyl transferase	0.002
PRK00654	466	PRK00654, glgA, glycogen synthase; Provisional	0.003
PRK09922	359	PRK09922, PRK09922, UDP-D-galactose:(glucosyl)lipo	0.004

>gnl|CDD|99974 cd03801, GT1_YqgM_like, This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known

 Score =  211 bits (540), Expect = 4e-64
 Identities = 115/408 (28%), Positives = 183/408 (44%), Gaps = 46/408 (11%)

Query: 85  KIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGS 144
           KI + + ++P   + GG ERH   L  ALA RGH V + T             +E     
Sbjct: 1   KILLVTPEYP--PSVGGAERHVLELARALAARGHEVTVLTPGDG----GLPDEEEVGGIV 54

Query: 145 NNKYPLLHFHEGEADKWRYSKGWEQFDEENQREPFDVVHSESVALPHWLA----RNVTNL 200
             + P L            +    +     +RE FDVVH+         A         L
Sbjct: 55  VVRPPPLLRVRRLLLLLLLALRLRRL---LRRERFDVVHAHDWLALLAAALAARLLGIPL 111

Query: 201 AVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQGVMLKVLNEIRFFNKYAHHVAIS 260
            ++ HG  LE  + G    L  K    +                 E R   +    +A+S
Sbjct: 112 VLTVHG--LEFGRPGNELGLLLKLARAL-----------------ERRALRRADRIIAVS 152

Query: 261 DSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVAGRL 320
           ++  E LR++  +P E++ VI NG++   +       ++ R R+GIP++   V+   GRL
Sbjct: 153 EATREELRELGGVPPEKITVIPNGVDTERFRPA---PRAARRRLGIPEDE-PVILFVGRL 208

Query: 321 VKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDF------GHQVLVMGSMSPAE 374
           V  KG  LL EA +KL  +YPDV L++ G GP  +  +        G +V  +G +   +
Sbjct: 209 VPRKGVDLLLEALAKLRKEYPDVRLVIVGDGPLREELEALAAELGLGDRVTFLGFVPDED 268

Query: 375 LRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAP- 433
           L A Y A D+FV P+L  +G  L L+EAM +G PV+AS    I   +V D E G +  P 
Sbjct: 269 LPALYAAADVFVLPSLY-EGFGLVLLEAMAAGLPVVASDVGGIPE-VVEDGETGLLVPPG 326

Query: 434 NVESLHKTLEAAVSEGPMRLAQRGEACRQYAASMFTANKMALAYERLF 481
           + E+L + +   + +  +R  + GEA R+  A  F+ +++A   E ++
Sbjct: 327 DPEALAEAILRLLDDPELR-RRLGEAARERVAERFSWDRVAARTEEVY 373

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. Length = 374

>gnl|CDD|99971 cd03798, GT1_wlbH_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score =  150 bits (381), Expect = 6e-41
 Identities = 101/411 (24%), Positives = 172/411 (41%), Gaps = 52/411 (12%)

Query: 86  IAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSN 145
           I V S         GG       L  ALA+RG  V +   P           +    G  
Sbjct: 1   ILVISS-LYPPPNNGGGGIFVKELARALAKRGVEVTVLA-PGPWGPKLLDLLKGRLVGVE 58

Query: 146 NKYPLLHFHEGEADKWRYSKGWEQFDE--ENQREPFDVVHSESVALPHWLAR-----NVT 198
               LL           Y        +  + +R   D++H+       + A         
Sbjct: 59  RLPVLLPVVPLLKGPLLYLLAARALLKLLKLKRFRPDLIHAHFAYPDGFAAALLKRKLGI 118

Query: 199 NLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQGVMLKVLNEIRFFNKYAHHV- 257
            L V+ HG       S +     ++ L  +           + + L       + A  V 
Sbjct: 119 PLVVTLHG-------SDVNLLPRKRLLRAL-----------LRRAL-------RRADAVI 153

Query: 258 AISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVA 317
           A+S++  + L+ +  I  E+V VI NG++   +       ++   ++G+P++  ++L V 
Sbjct: 154 AVSEALADELKALG-IDPEKVTVIPNGVDTERFSPA---DRAEARKLGLPEDKKVILFV- 208

Query: 318 GRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDF------GHQVLVMGSMS 371
           GRLV  KG   L EA ++L+ K PDV+L++ G GP  +  +          +V  +G++ 
Sbjct: 209 GRLVPRKGIDYLIEALARLLKKRPDVHLVIVGDGPLREALEALAAELGLEDRVTFLGAVP 268

Query: 372 PAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMF 431
             E+ A+Y A D+FV P+LR +G  L L+EAM  G PV+A+    I   I+ D E G + 
Sbjct: 269 HEEVPAYYAAADVFVLPSLR-EGFGLVLLEAMACGLPVVATDVGGIPE-IITDGENGLLV 326

Query: 432 AP-NVESLHKTLEAAVSEGPMRLAQRGEACRQYAASMFTANKMALAYERLF 481
            P + E+L + +   +++  +RL   G A R+  A  F+   +A     L+
Sbjct: 327 PPGDPEALAEAILRLLADPWLRL---GRAARRRVAERFSWENVAERLLELY 374

wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. Length = 377

>gnl|CDD|99987 cd03817, GT1_UGDG_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score =  131 bits (333), Expect = 3e-34
 Identities = 94/400 (23%), Positives = 162/400 (40%), Gaps = 58/400 (14%)

Query: 100 GGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEAD 159
            G+      L   L +RGH V++          PS      ++      P         D
Sbjct: 14  NGVATSIRRLAEELEKRGHEVYVVA--------PSYPGAPEEEEVVVVRPFRVPTFKYPD 65

Query: 160 ---KWRYSKGWEQFDEENQREPFDVVHSESVALPHWLARNVTNLAVSWHGIALESLQSGI 216
                   +      +E      D+VH+ +      L   V               + GI
Sbjct: 66  FRLPLPIPRALIIILKELG---PDIVHTHTPFSLGLLGLRVAR-------------KLGI 109

Query: 217 ---------FQDLTRKPLEPMSLAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEML 267
                    ++D T        +   + L   +++     RF+N+    +A S+   ++L
Sbjct: 110 PVVATYHTMYEDYT------HYVPLGRLLARAVVRRKLSRRFYNRCDAVIAPSEKIADLL 163

Query: 268 RDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVAGRLVKDKGHP 327
           R+ Y +    + VI  GI+ + +      G   R ++GIP++  ++L V GRL K+K   
Sbjct: 164 RE-YGVKR-PIEVIPTGIDLDRFEPVD--GDDERRKLGIPEDEPVLLYV-GRLAKEKNID 218

Query: 328 LLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDF------GHQVLVMGSMSPAELRAFYNA 381
            L  AF++L+ + PDV L++ G GP  +  ++         +V+  G +   EL  +Y A
Sbjct: 219 FLIRAFARLLKEEPDVKLVIVGDGPEREELEELARELGLADRVIFTGFVPREELPDYYKA 278

Query: 382 IDIFVNPTLRP-QGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAPNVESLHK 440
            D+FV  +    QG  L L+EAM +G PV+A   P +   +V D E GF+F P  E+L +
Sbjct: 279 ADLFVFASTTETQG--LVLLEAMAAGLPVVAVDAPGLPD-LVADGENGFLFPPGDEALAE 335

Query: 441 TLEAAVSEGPMRLAQRGEACRQYAASMFTANKMALAYERL 480
            L   + + P    +  +   + A     A K+   YE +
Sbjct: 336 ALLRLLQD-PELRRRLSKNAEESAEKFSFAKKVEKLYEEV 374

UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. Length = 374

>gnl|CDD|223515 COG0438, RfaG, Glycosyltransferase [Cell envelope biogenesis, outer membrane]

 Score =  126 bits (317), Expect = 4e-32
 Identities = 98/413 (23%), Positives = 155/413 (37%), Gaps = 44/413 (10%)

Query: 85  KIAVFSRKWPISTTPGGMERHAHTLHVALA--RRGHRVHIFTSPVDNINSPSISHQENDD 142
           KI +     P     GG+ER+   L  AL    RGH V +            +       
Sbjct: 2   KILILIIYPPPR--VGGIERYVLELAKALRLLGRGHEVLVIAPEKLEGLGIEV------- 52

Query: 143 GSNNKYPLLHFHEGEADKWRYSKGWEQFDEENQREPFDVVHSESVALPHWLARNVTNLAV 202
                  L                        +  P+D++H+      H L      L  
Sbjct: 53  -----LRLPSVSLPLLIVRLRPALLRLLLLLKRLLPYDIIHA------HSLLLAPGGLLA 101

Query: 203 SWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDS 262
                 L          L  + L    L     L  ++LK L +          +A+S +
Sbjct: 102 LLLLKLLGIPLVVTLHGLIPRILLLPRLLLLLGLLRLLLKRL-KKALRLLADRVIAVSPA 160

Query: 263 CGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVAGRLVK 322
             E+L  +      ++ VI NGI+  ++          R  + +P+    V+   GRL  
Sbjct: 161 LKELLEALG--VPNKIVVIPNGIDTEKF-------APARIGL-LPEGGKFVVLYVGRLDP 210

Query: 323 DKGHPLLHEAFSKLMVKYPDVYLIVAGSGP-WEQRYKDFGHQ------VLVMGSMSPAEL 375
           +KG  LL EA +KL  + PD+ L++ G GP   +  +    +      V  +G +   EL
Sbjct: 211 EKGLDLLIEAAAKLKKRGPDIKLVIVGDGPERREELEKLAKKLGLEDNVKFLGYVPDEEL 270

Query: 376 RAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAP-N 434
                + D+FV P+L   G  L L+EAM +G PV+AS    I   +V D E G +  P +
Sbjct: 271 AELLASADVFVLPSLSE-GFGLVLLEAMAAGTPVIASDVGGIP-EVVEDGETGLLVPPGD 328

Query: 435 VESLHKTLEAAVSEGPMRLAQRGEACRQYAASMFTANKMALAYERLFLCIKNE 487
           VE L   LE  + + P    + GEA R+     F+  ++A     L+  +  E
Sbjct: 329 VEELADALEQLLED-PELREELGEAARERVEEEFSWERIAEQLLELYEELLAE 380

Length = 381

>gnl|CDD|99979 cd03807, GT1_WbnK_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score =  122 bits (308), Expect = 8e-31
 Identities = 67/243 (27%), Positives = 117/243 (48%), Gaps = 18/243 (7%)

Query: 248 RFFNKYAHH-VAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGI 306
           R  + +    VA S +  E  +     P +++ VI NG++   +  DL      R  +G+
Sbjct: 131 RLLSSFIPLIVANSAAAAEYHQA-IGYPPKKIVVIPNGVDTERFSPDLDARARLREELGL 189

Query: 307 PKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDF------ 360
           P++   ++G+  RL   K H  L  A + L+ K+P+  L++ G GP     +        
Sbjct: 190 PEDT-FLIGIVARLHPQKDHATLLRAAALLLKKFPNARLLLVGDGPDRANLELLALKELG 248

Query: 361 -GHQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKG 419
              +V+++G  S  ++ A  NA+D+FV  +   +G    L+EAM  G PV+A+       
Sbjct: 249 LEDKVILLGERS--DVPALLNALDVFVLSS-LSEGFPNVLLEAMACGLPVVATDVGDNA- 304

Query: 420 TIVVDDEFGFMFAP-NVESLHKTLEAAVSEGPMRLAQRGEACRQYAASMFTANKMALAYE 478
            +V D   GF+  P + E+L + +EA +++  +R    GEA R+     F+   M  AYE
Sbjct: 305 ELVGDT--GFLVPPGDPEALAEAIEALLADPALR-QALGEAARERIEENFSIEAMVEAYE 361

Query: 479 RLF 481
            L+
Sbjct: 362 ELY 364

WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. Length = 365

>gnl|CDD|99982 cd03811, GT1_WabH_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score =  119 bits (300), Expect = 7e-30
 Identities = 80/385 (20%), Positives = 133/385 (34%), Gaps = 52/385 (13%)

Query: 96  STTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHE 155
           S   GG ER    L   L +RG+ V +       +      + E    +    P+     
Sbjct: 8   SLGGGGAERVLLNLANGLDKRGYDVTLV------VLRDEGDYLELLPSNVKLIPVRVLKL 61

Query: 156 GEADKWRYSKGWEQFDEENQREPFDVVHSESVALPHWLA----RNVTNLAVSWHGIALES 211
                        +     ++E  DVV S     P+ LA    R  T L V  H      
Sbjct: 62  KSLRDLLAILRLRRL---LRKEKPDVVISHLTTTPNVLALLAARLGTKLIVWEHN----- 113

Query: 212 LQSGIFQDLTRKPLEPMSLAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVY 271
                              + +  L+  +  +L   + + +    VA+S+   E L  + 
Sbjct: 114 -------------------SLSLELKRKLRLLLLIRKLYRRADKIVAVSEGVKEDLLKLL 154

Query: 272 QIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVAGRLVKDKGHPLLHE 331
            IP +++ VI N I+     ++     +             V+   GRL   KG   L  
Sbjct: 155 GIPPDKIEVIYNPID-----IEEIRALAEEPLELGIPPDGPVILAVGRLSPQKGFDTLIR 209

Query: 332 AFSKLMVKYPDVYLIVAGSGPWEQRY----KDFG--HQVLVMGSMSPAELRAFYNAIDIF 385
           AF+ L  + PD  L++ G GP  +      K+ G   +V  +G  S      +  A D+F
Sbjct: 210 AFALLRKEGPDARLVILGDGPLREELEALAKELGLADRVHFLGFQSNP--YPYLKAADLF 267

Query: 386 VNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAPNVESLHKTLEAA 445
           V  +   +G    L+EAM  G PV+A+  P  +  I+ D E G +     E+       A
Sbjct: 268 VLSSRY-EGFPNVLLEAMALGTPVVATDCPGPR-EILEDGENGLLVPVGDEAALAAAALA 325

Query: 446 VSEGPMRLAQRGEACRQYAASMFTA 470
           + +  +    R          +   
Sbjct: 326 LLDLLLDPELRERLAAAARERVARE 350

WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. Length = 353

>gnl|CDD|99972 cd03799, GT1_amsK_like, This is a family of GT1 glycosyltransferases found specifically in certain bacteria

 Score =  118 bits (298), Expect = 1e-29
 Identities = 91/381 (23%), Positives = 141/381 (37%), Gaps = 69/381 (18%)

Query: 112 ALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHF-HEGEADKWRYSKGWEQF 170
           AL   GH V IF   +       +  ++  + +  +Y         +A            
Sbjct: 23  ALEAAGHEVEIF--SLRPPEDTLVHPEDRAELARTRYLARSLALLAQALVLA-------- 72

Query: 171 DEENQREPFDVVHSESVALP---HWLARNVTNLAVSW--HGIALESLQSGIFQDLTRKPL 225
             E +R   D +H+     P     LA  +  +  S+  HG   +  +S    DL  K  
Sbjct: 73  -RELRRLGIDHIHAHFGTTPATVAMLASRLGGIPYSFTAHGK--DIFRSPDAIDLDEK-- 127

Query: 226 EPMSLAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGI 285
                             L    F       VAIS+   + L  +     +++HV+  G+
Sbjct: 128 ------------------LARADFV------VAISEYNRQQLIRLLGCDPDKIHVVHCGV 163

Query: 286 NENEYGVDLSLGQSFRSRIGIPKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYL 345
                  DL     F  R   P    L +   GRLV+ KG   L EA + L  +  D  L
Sbjct: 164 -------DLER---FPPRPPPPPGEPLRILSVGRLVEKKGLDYLLEALALLKDRGIDFRL 213

Query: 346 IVAGSGPWEQRYKDF------GHQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQ-----G 394
            + G GP     +          +V ++G+ S  E+R    A D+FV P++        G
Sbjct: 214 DIVGDGPLRDELEALIAELGLEDRVTLLGAKSQEEVRELLRAADLFVLPSVTAADGDREG 273

Query: 395 LDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAP-NVESLHKTLEAAVSEGPMRL 453
           L + LMEAM  G PV+++    I   +V D E G +  P + E+L   +E  + +  +R 
Sbjct: 274 LPVVLMEAMAMGLPVISTDVSGIP-ELVEDGETGLLVPPGDPEALADAIERLLDDPELRR 332

Query: 454 AQRGEACRQYAASMFTANKMA 474
              GEA R      F   K A
Sbjct: 333 EM-GEAGRARVEEEFDIRKQA 352

amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. Length = 355

>gnl|CDD|99991 cd03821, GT1_Bme6_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score =  110 bits (276), Expect = 2e-26
 Identities = 92/410 (22%), Positives = 154/410 (37%), Gaps = 58/410 (14%)

Query: 86  IAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSN 145
           I  F  K+      GG  R    L  ALA+ GH V + T+     ++         +G  
Sbjct: 6   IPSFDPKY------GGPVRVVLNLSKALAKLGHEVTVATT-----DAGGDPLLVALNGVP 54

Query: 146 NKYPLLHFHEG-EADKWRYSKGWEQFDEENQREPFDVVHSESVALPHWLARNVTNLAVSW 204
            K   ++   G    ++ +      +   N RE  D+VH       H    +  +LA + 
Sbjct: 55  VKLFSINVAYGLNLARYLFPPSLLAWLRLNIRE-ADIVHV------H-GLWSYPSLAAAR 106

Query: 205 HGIALESLQSGIFQDLTRKP--------LEPMSLAFNKSLQGVMLKVLNEIRFFNKYAHH 256
                              P        L+P +L  +K+L+  +   L E R     A  
Sbjct: 107 AARK------------YGIPYVVSPHGMLDPWAL-PHKALKKRLAWFLFERRLLQAAAAV 153

Query: 257 VAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGV 316
            A S+   E            + VI NG++   +    S G   R +  I  +  ++L  
Sbjct: 154 HATSEQ--EAAEIRRLGLKAPIAVIPNGVDIPPFAALPSRG--RRRKFPILPDKRIIL-F 208

Query: 317 AGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGP------WEQRYKDFG--HQVLVMG 368
            GRL   KG  LL EAF+KL  ++PD +L++AG          +Q     G   +V   G
Sbjct: 209 LGRLHPKKGLDLLIEAFAKLAERFPDWHLVIAGPDEGGYRAELKQIAAALGLEDRVTFTG 268

Query: 369 SMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFG 428
            +   +  A     D+FV P+   +   + + EA+  G PV+ +     +   +++   G
Sbjct: 269 MLYGEDKAAALADADLFVLPS-HSENFGIVVAEALACGTPVVTTDKVPWQE--LIEYGCG 325

Query: 429 FMFAPNVESLHKTLEAAVSEGPMRLAQRGEACRQYAASMFTANKMALAYE 478
           ++   +V++L   L  A+   P RL   GE  R      F+   +A    
Sbjct: 326 WVVDDDVDALAAALRRALEL-PQRLKAMGENGRALVEERFSWTAIAQQLL 374

Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. Length = 375

>gnl|CDD|99980 cd03808, GT1_cap1E_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score =  108 bits (271), Expect = 8e-26
 Identities = 63/244 (25%), Positives = 99/244 (40%), Gaps = 29/244 (11%)

Query: 248 RFFNKYAHHV-AISDS-CGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIG 305
           R   ++   V   ++      L+    I  ++  V++ G      GVDL     F     
Sbjct: 133 RLALRFTDKVIFQNEDDRDLALK--LGIIKKKKTVLIPGS-----GVDLDR---FSPSPE 182

Query: 306 IPKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDF----- 360
                  V     RL+KDKG   L EA   L  K P+V L++ G G  E           
Sbjct: 183 PIPEDDPVFLFVARLLKDKGIDELLEAARILKAKGPNVRLLLVGDGDEENPAAILEIEKL 242

Query: 361 --GHQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIK 418
               +V  +G     ++     A D+FV P+ R +GL   L+EAM  G+PV+A+    + 
Sbjct: 243 GLEGRVEFLGFRD--DVPELLAAADVFVLPSYR-EGLPRVLLEAMAMGRPVIATD---VP 296

Query: 419 GT--IVVDDEFGFMFAP-NVESLHKTLEAAVSEGPMRLAQRGEACRQYAASMFTANKMAL 475
           G    V+D   GF+  P + E+L   +E  + + P   A+ G+A R+ A   F    +  
Sbjct: 297 GCREAVIDGVNGFLVPPGDAEALADAIERLIED-PELRARMGQAARKRAEEEFDEEIVVK 355

Query: 476 AYER 479
               
Sbjct: 356 KLLE 359

cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. Length = 359

>gnl|CDD|215979 pfam00534, Glycos_transf_1, Glycosyl transferases group 1

 Score =  101 bits (254), Expect = 2e-25
 Identities = 48/159 (30%), Positives = 80/159 (50%), Gaps = 14/159 (8%)

Query: 313 VLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDF------GHQVLV 366
           ++   GRLV +KG  LL EAF+ L  ++P++ L++ G G  E++ K           V+ 
Sbjct: 4   IILFVGRLVPEKGLDLLLEAFALLKEQHPNLKLVIVGDGEEEKKLKKLALKLGLEDNVIF 63

Query: 367 MGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDE 426
           +G +   +L   Y   D+FV P+   +G  L L+EAM +G PV+A+        IV D E
Sbjct: 64  VGFVPDEDLIELYRIADLFVLPSRY-EGFGLVLLEAMAAGVPVIATDVGGPAE-IVKDGE 121

Query: 427 FGFMFAP-NVESLHKTLEAAVSEGPMRLAQRGEACRQYA 464
            G +  P + E+L + +E  + +  +R     E   + A
Sbjct: 122 TGLLVDPGDAEALAEAIEKLLKDEELR-----ERLGENA 155

Mutations in this domain of human PIGA lead to disease (Paroxysmal Nocturnal haemoglobinuria). Members of this family transfer activated sugars to a variety of substrates, including glycogen, Fructose-6-phosphate and lipopolysaccharides. Members of this family transfer UDP, ADP, GDP or CMP linked sugars. The eukaryotic glycogen synthases may be distant members of this family. Length = 158

>gnl|CDD|99969 cd03795, GT1_like_4, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 96.5 bits (241), Expect = 7e-22
 Identities = 96/393 (24%), Positives = 152/393 (38%), Gaps = 65/393 (16%)

Query: 99  PGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEA 158
            GG+E+    L   LA RG  V +  +       P    +E +     + P L  +    
Sbjct: 13  RGGIEQVIRDLAEGLAARGIEVAVLCAS----PEPKGRDEERNGHRVIRAPSL-LNVAST 67

Query: 159 D-KWRYSKGWEQFDEENQREPFDVVHSESVALP-------HWLARNVTNLAVSWHGIALE 210
                + K   Q  +    +  DV+H   +  P         L      + V WH     
Sbjct: 68  PFSPSFFK---QLKK--LAKKADVIH---LHFPNPLADLALLLLPRKKPVVVHWH----- 114

Query: 211 SLQSGIFQDLTRKPLEPMSLAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDV 270
              S I +   +K L    L   + LQ          RF  +    VA S +  E    V
Sbjct: 115 ---SDIVK---QKLL----LKLYRPLQ---------RRFLRRADAIVATSPNYAETS-PV 154

Query: 271 YQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVAGRLVKDKGHPLLH 330
            +   ++V VI  G++   Y    +L ++   R          L V GRLV  KG  +L 
Sbjct: 155 LRRFRDKVRVIPLGLDPARYPRPDALEEAIWRRAAGRP---FFLFV-GRLVYYKGLDVLL 210

Query: 331 EAFSKLMVKYPDVYLIVAGSGPWEQRYKDF------GHQVLVMGSMSPAELRAFYNAIDI 384
           EA + L    PD  L++ G GP E   +          +V  +G +   E  A   A D+
Sbjct: 211 EAAAAL----PDAPLVIVGEGPLEAELEALAAALGLLDRVRFLGRLDDEEKAALLAACDV 266

Query: 385 FVNP-TLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAP-NVESLHKTL 442
           FV P   R +   + L+EAM  GKPV+++   +    + +    G +  P +  +L + +
Sbjct: 267 FVFPSVERSEAFGIVLLEAMAFGKPVISTEIGTGGSYVNLHGVTGLVVPPGDPAALAEAI 326

Query: 443 EAAVSEGPMRLAQR-GEACRQYAASMFTANKMA 474
              + + P  L +R GEA R+ A   FTA++M 
Sbjct: 327 RRLLED-P-ELRERLGEAARERAEEEFTADRMV 357

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria and eukaryotes. Length = 357

>gnl|CDD|99989 cd03819, GT1_WavL_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 94.2 bits (235), Expect = 4e-21
 Identities = 85/392 (21%), Positives = 151/392 (38%), Gaps = 64/392 (16%)

Query: 100 GGMERHAHTLHVALARRGHRVHIFTSP---VDNINSPSISHQENDDGSNNKYPLLHFHEG 156
           GG+ER    L  AL  RGHR  + ++    V  + +    H +      +K PL      
Sbjct: 10  GGVERGTLELARALVERGHRSLVASAGGRLVAELEAEGSRHIKLP--FISKNPLR----- 62

Query: 157 EADKWRYSKGWEQFDEENQREPFDVVHSESVALPHWLARNVTNLAVSWHGIALESLQSGI 216
                       +   E +    D+VH+ S   P W A     LA         +   G 
Sbjct: 63  ---ILLNVARLRRLIREEK---VDIVHARS-RAPAWSAY----LAARRTRPPFVTTVHGF 111

Query: 217 FQDLTRKPLEPMSLAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSE 276
           +             + N     +M +    I          A+S+   + +R+ Y +  +
Sbjct: 112 Y-------------SVNFRYNAIMARGDRVI----------AVSNFIADHIRENYGVDPD 148

Query: 277 RVHVILNGINENEY---GVDLSLGQSFRSRIGIPKNASLVLGVAGRLVKDKGHPLLHEAF 333
           R+ VI  G++ + +    V      +      +PK    V+ + GRL + KG  +  EA 
Sbjct: 149 RIRVIPRGVDLDRFDPGAVPPERILALAREWPLPKGK-PVILLPGRLTRWKGQEVFIEAL 207

Query: 334 SKLMVKYPDVYLIVAGSGPWEQRYKDFGHQVLVMGSM-----------SPAELRAFYNAI 382
           ++L    PDV+L++ G     Q  + +  ++L +                +++ A Y   
Sbjct: 208 ARLKKDDPDVHLLIVGD---AQGRRFYYAELLELIKRLGLQDRVTFVGHCSDMPAAYALA 264

Query: 383 DIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAPN-VESLHKT 441
           DI V+ +  P+    T +EA   G+PV+AS     + T V   E G +  P   E+L + 
Sbjct: 265 DIVVSASTEPEAFGRTAVEAQAMGRPVIASDHGGARET-VRPGETGLLVPPGDAEALAQA 323

Query: 442 LEAAVSEGPMRLAQRGEACRQYAASMFTANKM 473
           L+  +S  P   A+     R    ++F+ ++M
Sbjct: 324 LDQILSLLPEGRAKMFAKARMCVETLFSYDRM 355

WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. Length = 355

>gnl|CDD|99985 cd03814, GT1_like_2, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 93.8 bits (234), Expect = 7e-21
 Identities = 83/371 (22%), Positives = 122/371 (32%), Gaps = 74/371 (19%)

Query: 113 LARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEADKWRYSKGWEQFDE 172
           L  RGH V +          P    +          P +        +            
Sbjct: 27  LRARGHEVLVIA--------PGPFRESEGPARVVPVPSVPLPGYPEIRLALPPRRRVRRL 78

Query: 173 ENQREPFDVVHSESVALPHWLARNVTNLAVSWHGIALESLQSGIFQ--------DLTRKP 224
            +   P DVVH  +       A      A    GI +       +              P
Sbjct: 79  LDAFAP-DVVHIATPGPLGLAAL----RAARRLGIPV----VTSYHTDFPEYLRYYGLGP 129

Query: 225 LEPMSLAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNG 284
           L  ++ A+ +              F N+    +  S S   +  ++      RV +    
Sbjct: 130 LSWLAWAYLR-------------WFHNRADRVLVPSPS---LADELRARGFRRVRLW--- 170

Query: 285 INENEYGVDLSL------GQSFRSRIGIPKNASLVLGVAGRLVKDKGHPLLHEAFSKLMV 338
                 GVD  L       ++ R+R+G P     VL   GRL  +K    L +A   L  
Sbjct: 171 ----PRGVDTELFHPRRRDEALRARLGPPDR--PVLLYVGRLAPEKNLEALLDADLPL-R 223

Query: 339 KYPDVYLIVAGSGPWEQRYKDFGHQVLVMGSMSPAELRAFYNAIDIFVNP----TLRPQG 394
           + P V L++ G GP   R +     V  +G +   EL A Y + D+FV P    T    G
Sbjct: 224 RRPPVRLVIVGDGPARARLEARYPNVHFLGFLDGEELAAAYASADVFVFPSRTETF---G 280

Query: 395 LDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAPNVESLHKTLEAAVSEGPMRLA 454
             L ++EAM SG PV+A         IV D E G +  P      +   AA+      L 
Sbjct: 281 --LVVLEAMASGLPVVAPDAGGPAD-IVTDGENGLLVEPGDA---EAFAAAL----AALL 330

Query: 455 QRGEACRQYAA 465
              E  R+ AA
Sbjct: 331 ADPELRRRMAA 341

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria and eukaryotes. Length = 364

>gnl|CDD|99993 cd03823, GT1_ExpE7_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 93.1 bits (232), Expect = 9e-21
 Identities = 86/397 (21%), Positives = 136/397 (34%), Gaps = 65/397 (16%)

Query: 98  TPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGE 157
           + GG E  AH L  ALA+RGH V + T+  D              G      L      +
Sbjct: 13  SVGGAEVVAHDLAEALAKRGHEVAVLTAGEDPPRQDKEVIGVVVYGRPIDEVLRSALPRD 72

Query: 158 ADKWRYSKGWE---QFDEENQREPFDVVHSE-----SVALPHWLARNVTNLAVSWHGIAL 209
                         +F    +    DVVH        V++          + ++ H    
Sbjct: 73  LFHLSDYDNPAVVAEFARLLEDFRPDVVHFHHLQGLGVSILRAARDRGIPIVLTLH---- 128

Query: 210 ESLQSGIFQDLTRKPLEPMSLAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRD 269
                           +   +   + L            F       +A S      L D
Sbjct: 129 ----------------DYWLICPRQGL------------FKKGGDAVIAPS----RFLLD 156

Query: 270 VYQ---IPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVAGRLVKDKGH 326
            Y    + +E++ VI NGI+ +              R   P    L  G  G+L   KG 
Sbjct: 157 RYVANGLFAEKISVIRNGIDLDRA--------KRPRRA--PPGGRLRFGFIGQLTPHKGV 206

Query: 327 PLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDF---GHQVLVMGSMSPAELRAFYNAID 383
            LL EAF +L     D+ L++ G+G   +          +V  +G+    E+  FY  ID
Sbjct: 207 DLLLEAFKRL--PRGDIELVIVGNGLELEEESYELEGDPRVEFLGAYPQEEIDDFYAEID 264

Query: 384 IFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAP-NVESLHKTL 442
           + V P++ P+   L + EA+ +G PV+AS    +   +V D   G +F P + E L   L
Sbjct: 265 VLVVPSIWPENFPLVIREALAAGVPVIASDIGGMA-ELVRDGVNGLLFPPGDAEDLAAAL 323

Query: 443 EAAVSEGPMRLAQRGEACRQYAASMFTANKMALAYER 479
           E  + + P  L +         +    A +    Y  
Sbjct: 324 ERLIDD-PDLLERLRAGIEPPRSIEDQAEEYLKLYRS 359

ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). Length = 359

>gnl|CDD|99975 cd03802, GT1_AviGT4_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 91.9 bits (229), Expect = 2e-20
 Identities = 92/414 (22%), Positives = 145/414 (35%), Gaps = 96/414 (23%)

Query: 84  LKIAVFSR-KWPISTT-PGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQEND 141
           ++IA+ +  + P+     GG ER    L   L  RGH V +F S              + 
Sbjct: 1   MRIALVAPPREPVPPPAYGGTERVVAALTEGLVARGHEVTLFAS-------------GDS 47

Query: 142 DGSNNKYPLLHFHEGEADKWRYSKGWEQFDEENQREP---FDVVHSESVALPHWLARNV- 197
             +    P++          R     E      +      FD+VH+ S+ LP   AR + 
Sbjct: 48  KTAAPLVPVVPEPLRLDAPGRDRAEAEALALAERALAAGDFDIVHNHSLHLPLPFARPLP 107

Query: 198 TNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQGVMLKVLNEIRFFNKYAHHV 257
             +  + HG                 P +P            +LK+    R    +   V
Sbjct: 108 VPVVTTLHG-----------------PPDP-----------ELLKLYYAARPDVPF---V 136

Query: 258 AISDSCGEMLRDVYQIPSER-VHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGV 316
           +ISD            P    V  + NGI+ ++Y                  +  L LG 
Sbjct: 137 SISD------AQRRPWPPLPWVATVHNGIDLDDYPFRGP-----------KGDYLLFLG- 178

Query: 317 AGRLVKDKGHPLLHEAFSKLMV-KYPDVYLIVAGSGPWEQRYKDF--------GHQVLVM 367
             R+  +KG    H A   +   +   + L +AG    +  Y           G  +  +
Sbjct: 179 --RISPEKG---PHLA---IRAARRAGIPLKLAGPV-SDPDYFYREIAPELLDGPDIEYL 229

Query: 368 GSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEF 427
           G +  AE           + P L  +   L ++EAM  G PV+A R  ++   +V D   
Sbjct: 230 GEVGGAEKAELLGNARALLFPILWEEPFGLVMIEAMACGTPVIAFRRGAVPE-VVEDGVT 288

Query: 428 GFMFAPNVESLHKTLEAAVSEGPMRLAQRGEACRQYAASMFTANKMALAYERLF 481
           GF+   +VE     L AAV+    RL     ACR+ A   F+A +M   Y  L+
Sbjct: 289 GFL-VDSVE----ELAAAVARA-DRL--DRAACRRRAERRFSAARMVDDYLALY 334

aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. Length = 335

>gnl|CDD|99973 cd03800, GT1_Sucrose_synthase, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 92.6 bits (231), Expect = 2e-20
 Identities = 93/418 (22%), Positives = 156/418 (37%), Gaps = 78/418 (18%)

Query: 100 GGMERHAHTLHVA--LARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGE 157
           GG   + + L +A  LAR GH V IFT  +D+   P +              ++    G 
Sbjct: 21  GGQ--NVYVLELARALARLGHEVDIFTRRIDDALPPIVEL-------APGVRVVRVPAGP 71

Query: 158 ADKWRYSKGWEQFDE---------ENQREPFDVVHSESVALPH-WLARNVTNLAVSWHGI 207
           A+     + W   DE           +    D++H+      H W +  V  L     GI
Sbjct: 72  AEYLPKEELWPYLDEFADDLLRFLRREGGRPDLIHA------HYWDSGLVALLLARRLGI 125

Query: 208 ALESLQSGIFQDLTRKPLEPMSLAFNKSLQGVMLKVLNEIRFFNKY--------AHH--- 256
            L  + +              SL   K        +     +                  
Sbjct: 126 PL--VHTF------------HSLGAVK-----RRHLGAADTYEPARRIEAEERLLRAADR 166

Query: 257 -VAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLG 315
            +A +    E L  +Y     R+ V+  G++   +       ++ R+R+    +   +L 
Sbjct: 167 VIASTPQEAEELYSLYGAYPRRIRVVPPGVDLERFTPYGR-AEARRARLLRDPDKPRILA 225

Query: 316 VAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAG-------SGPWEQRY---KDFG--HQ 363
           V GRL   KG   L  A+++L        L++ G       +   E+     ++ G   +
Sbjct: 226 V-GRLDPRKGIDTLIRAYAELPELRERANLVIVGGPRDDILAMDEEELRELARELGVIDR 284

Query: 364 VLVMGSMSPAELRAFYNAIDIFVNPTL-RPQGLDLTLMEAMMSGKPVMASRFPSIKGTIV 422
           V   G +S  +L A Y A D+FVNP L  P G  LT +EAM  G PV+A+     +  IV
Sbjct: 285 VDFPGRVSREDLPALYRAADVFVNPALYEPFG--LTALEAMACGLPVVATAVGGPR-DIV 341

Query: 423 VDDEFGFMFAP-NVESLHKTLEAAVSEGPMRLAQRGEACRQYAASMFTANKMALAYER 479
           VD   G +  P + E+L   L   +++  +R  +   A  + A + +T  ++A     
Sbjct: 342 VDGVTGLLVDPRDPEALAAALRRLLTDPALR-RRLSRAGLRRARARYTWERVAARLLE 398

The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. Length = 398

>gnl|CDD|100003 cd05844, GT1_like_7, Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds

 Score = 91.5 bits (228), Expect = 4e-20
 Identities = 60/214 (28%), Positives = 90/214 (42%), Gaps = 30/214 (14%)

Query: 273 IPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVAGRLVKDKGHPLLHEA 332
            P E+VHV   G++             F       +    +L V GR V+ KG  LL EA
Sbjct: 162 FPPEKVHVHPIGVDT----------AKFTPATPARR-PPRILFV-GRFVEKKGPLLLLEA 209

Query: 333 FSKLMVKYPDVYLIVAGSGPWEQRYKDF------GHQVLVMGSMSPAELRAFYNAIDIFV 386
           F++L  + P+V L++ G GP     +        G +V  +G+   AE+R       IF+
Sbjct: 210 FARLARRVPEVRLVIIGDGPLLAALEALARALGLGGRVTFLGAQPHAEVRELMRRARIFL 269

Query: 387 NPTLRP-----QGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAP-NVESLHK 440
            P++       +GL + L+EA  SG PV+A+R   I    V D E G +    +V +L  
Sbjct: 270 QPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGGIPE-AVEDGETGLLVPEGDVAALAA 328

Query: 441 TLEA-AVSEGPMRLAQR-GEACRQYAASMFTANK 472
            L           L  R G A R+     F   +
Sbjct: 329 ALGRLLADPD---LRARMGAAGRRRVEERFDLRR 359

The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. Length = 367

>gnl|CDD|100000 cd04951, GT1_WbdM_like, This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli

 Score = 90.8 bits (226), Expect = 6e-20
 Identities = 56/215 (26%), Positives = 104/215 (48%), Gaps = 15/215 (6%)

Query: 274 PSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVAGRLVKDKGHPLLHEAF 333
            + +  V+ NGI+ + +  D +     R+ +G+  +  ++L V GRLV+ K +P L +AF
Sbjct: 152 NANKSFVVYNGIDTDRFRKDPARRLKIRNALGVKNDTFVILAV-GRLVEAKDYPNLLKAF 210

Query: 334 SKLMVKYPDVYLIVAGSGPWEQRYK------DFGHQVLVMGSMSPAELRAFYNAIDIFVN 387
           +KL+  Y D+ L++AG GP     +         ++V ++G     ++ A+YNA D+FV 
Sbjct: 211 AKLLSDYLDIKLLIAGDGPLRATLERLIKALGLSNRVKLLGLRD--DIAAYYNAADLFVL 268

Query: 388 PTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAP-NVESLHKTLEAAV 446
            +   +G  L + EAM    PV+A+    ++   VV D  G +    + E+L   ++  +
Sbjct: 269 SSAW-EGFGLVVAEAMACELPVVATDAGGVRE--VVGD-SGLIVPISDPEALANKIDEIL 324

Query: 447 SEGPMRLAQRGEACRQYAASMFTANKMALAYERLF 481
                     G A R+     F+ N +   +  L+
Sbjct: 325 KMSGEERDIIG-ARRERIVKKFSINSIVQQWLTLY 358

In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found in bacteria. Length = 360

>gnl|CDD|99968 cd03794, GT1_wbuB_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 89.2 bits (222), Expect = 3e-19
 Identities = 93/428 (21%), Positives = 153/428 (35%), Gaps = 68/428 (15%)

Query: 85  KIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVD--NINSPSISHQENDD 142
           KI + S+ +P     G        L   L +RGH V + T   +  +        +E  D
Sbjct: 1   KILILSQYFPPELGGGA--FRTTELAEELVKRGHEVTVITGSPNYPSGKIYKGYKREEVD 58

Query: 143 G-------------SNNKYPLLHFHEGEADKWRYSKGWEQFDEENQREPFDVVHSES--- 186
           G             +     LL++                     +R   DV+ + S   
Sbjct: 59  GVRVHRVPLPPYKKNGLLKRLLNYLSFALSALLALL--------KRRRRPDVIIATSPPL 110

Query: 187 -VALP-HWLARNVTNLAVSWHGIALESLQSGIF--QDLTRKPLEPMSL--AFNKSLQGVM 240
            +AL    LAR          G         +   +DL   P   ++L    N SL   +
Sbjct: 111 LIALAALLLAR--------LKGAPF------VLEVRDLW--PESAVALGLLKNGSLLYRL 154

Query: 241 LKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSF 300
           L+ L E   + +    V IS    E L     +P E++ VI NG++   +          
Sbjct: 155 LRKL-ERLIYRRADAIVVISPGMREYLVRRG-VPPEKISVIPNGVDLELF--KPPPADES 210

Query: 301 RSRIGIPKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGP----WEQR 356
             +     +   V+  AG + + +G   L EA   L+   PD+  ++ G GP     ++ 
Sbjct: 211 LRKELGLDD-KFVVLYAGNIGRAQGLDTLLEAA-ALLKDRPDIRFLIVGDGPEKEELKEL 268

Query: 357 YKDFGHQ-VLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLT----LMEAMMSGKPVMA 411
            K  G   V  +G +   EL     A D+ + P       +      L E M +GKPV+A
Sbjct: 269 AKALGLDNVTFLGRVPKEELPELLAAADVGLVPLKPGPAFEGVSPSKLFEYMAAGKPVLA 328

Query: 412 SRFPSIKGTIVVDDEFGFMFAP-NVESLHKTLEAAVSEGPMRLAQRGEACRQYAASMFTA 470
           S        +V +   G +  P + E+L   +   + + P   A+ GE  R+Y    F+ 
Sbjct: 329 SVDGESA-ELVEEAGAGLVVPPGDPEALAAAILELL-DDPEERAEMGENGRRYVEEKFSR 386

Query: 471 NKMALAYE 478
            K+A    
Sbjct: 387 EKLAERLL 394

wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. Length = 394

>gnl|CDD|99990 cd03820, GT1_amsD_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 88.0 bits (219), Expect = 4e-19
 Identities = 86/359 (23%), Positives = 135/359 (37%), Gaps = 66/359 (18%)

Query: 97  TTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEG 156
              GG ER    L  ALA +GH V I +  +D    P     E D         L     
Sbjct: 10  GNAGGAERVLSNLANALAEKGHEVTIIS--LDKGEPPFY---ELDPKIKVID--LGDKRD 62

Query: 157 EADKWRYSKGWE--QFDEENQREPFDVVHSESVALPHWLA---RNVTNLAVSWHGIALES 211
                R+ K     +  + N+    DVV S   +L  +LA     +  L VS H  + ++
Sbjct: 63  SKLLARFKKLRRLRKLLKNNK---PDVVISFLTSLLTFLASLGLKIVKLIVSEH-NSPDA 118

Query: 212 LQSGIFQDLTRKPLEPMSLAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVY 271
            +  + + L R+ L   + A       V+L    E R       +               
Sbjct: 119 YKKRLRRLLLRRLLYRRADAV------VVL--TEEDRALYYKKFN--------------- 155

Query: 272 QIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVAGRLVKDKGHPLLHE 331
               + V VI N +                        +  +L V GRLV  KG  LL E
Sbjct: 156 ----KNVVVIPNPLPFPP------------EEPSSDLKSKRILAV-GRLVPQKGFDLLIE 198

Query: 332 AFSKLMVKYPDVYLIVAGSGPWEQRYKDF------GHQVLVMGSMSPAELRAFYNAIDIF 385
           A++K+  K+PD  L + G GP  +  +          +V+++G      +  +Y    IF
Sbjct: 199 AWAKIAKKHPDWKLRIVGDGPEREALEALIKELGLEDRVILLGFTK--NIEEYYAKASIF 256

Query: 386 VNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAP-NVESLHKTLE 443
           V  + R +G  + L+EAM  G PV++   P+    I+ D   G +    +VE+L + L 
Sbjct: 257 VLTS-RFEGFPMVLLEAMAFGLPVISFDCPTGPSEIIEDGVNGLLVPNGDVEALAEALL 314

AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. Length = 348

>gnl|CDD|99981 cd03809, GT1_mtfB_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 87.8 bits (218), Expect = 6e-19
 Identities = 84/388 (21%), Positives = 135/388 (34%), Gaps = 53/388 (13%)

Query: 99  PGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEA 158
           P G+ R+A  L  AL +      +   P                       LL       
Sbjct: 14  PTGIGRYARELLRALLKLDPEEVLLLLPGAP-------GLLLLPLRAALRLLLRLPRRLL 66

Query: 159 DKWRYSKGWEQFDEENQREPFDVVHSESVALPHWLARNVTNLAVSWHGIALESLQSGIFQ 218
               +                D++HS     P    R V  +                  
Sbjct: 67  WGLLFLLRAGDRLLLLLLGL-DLLHSPHNTAPLLRLRGVPVVVT--------------IH 111

Query: 219 DLTRKPL---EPMSLAFNKSLQGVMLKVLNEIRFFNKYAHHV-AISDSCGEMLRDVYQIP 274
           DL   PL   E  S  F +  + ++ + L       + A  +  +S++    L     +P
Sbjct: 112 DLI--PLRFPEYFSPGFRRYFRRLLRRAL-------RRADAIITVSEATKRDLLRYLGVP 162

Query: 275 SERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVAGRLVKDKGHPLLHEAFS 334
            +++ VI  G++   +    +  +  R+   +P+     L V     + K    L EAF+
Sbjct: 163 PDKIVVIPLGVDP-RFRPPPAEAEVLRALYLLPRP--YFLYVGTIEPR-KNLERLLEAFA 218

Query: 335 KLMVKYPDVYLIVAGSGPWEQRYKDF-------GHQVLVMGSMSPAELRAFYNAIDIFVN 387
           +L  K PD  L++ G   W              G +V  +G +S  EL A Y     FV 
Sbjct: 219 RLPAKGPDPKLVIVGKRGWLNEELLARLRELGLGDRVRFLGYVSDEELAALYRGARAFVF 278

Query: 388 PTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAP-NVESLHKTLEAAV 446
           P+L  +G  L ++EAM  G PV+AS   S+    V  D     F P + E+L   +E  +
Sbjct: 279 PSLY-EGFGLPVLEAMACGTPVIASNISSLP--EVAGD-AALYFDPLDPEALAAAIERLL 334

Query: 447 SEGPMRLAQRGEACRQYAASMFTANKMA 474
            +  +R   R E     A   F+  K A
Sbjct: 335 EDPALREELR-ERGLARAKR-FSWEKTA 360

mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. Length = 365

>gnl|CDD|99994 cd03825, GT1_wcfI_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 85.0 bits (211), Expect = 6e-18
 Identities = 63/232 (27%), Positives = 100/232 (43%), Gaps = 16/232 (6%)

Query: 257 VAISDSCGEMLRDVYQIPSERVHVILNGINENEY-GVDLSLGQSFRSRIGIPKNASLVL- 314
           VA S    +  R         + VI NGI+   +   D       R R+G+P +  ++L 
Sbjct: 140 VAPSRWLADCARSSSLFKGIPIEVIPNGIDTTIFRPRDKREA---RKRLGLPADKKIILF 196

Query: 315 GVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDFGHQVLVMGSMS-PA 373
           G  G     KG   L EA  +L  ++ D   +V       +   D    V  +GS++   
Sbjct: 197 GAVGGTDPRKGFDELIEALKRLAERWKDDIELVVFGASDPEIPPDLPFPVHYLGSLNDDE 256

Query: 374 ELRAFYNAIDIFVNPTLR---PQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFM 430
            L   Y+A D+FV P+L+   P     T +EA+  G PV+A     I   IV     G++
Sbjct: 257 SLALIYSAADVFVVPSLQENFPN----TAIEALACGTPVVAFDVGGIPD-IVDHGVTGYL 311

Query: 431 FAP-NVESLHKTLEAAVSEGPMRLAQRGEACRQYAASMFTANKMALAYERLF 481
             P + E L + +E  +++ P    + GEA R+ A + F +   A  Y  L+
Sbjct: 312 AKPGDPEDLAEGIEWLLAD-PDEREELGEAARELAENEFDSRVQAKRYLSLY 362

wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. Length = 365

>gnl|CDD|132132 TIGR03088, stp2, sugar transferase, PEP-CTERM/EpsH1 system associated

 Score = 84.0 bits (208), Expect = 1e-17
 Identities = 76/249 (30%), Positives = 118/249 (47%), Gaps = 24/249 (9%)

Query: 248 RFFNKYAHH-VAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGI 306
           R +    HH VA+S    + LR   ++P  ++H I NG++   +       +  RS I  
Sbjct: 131 RLYRPLIHHYVAVSRDLEDWLRGPVKVPPAKIHQIYNGVDTERF----HPSRGDRSPILP 186

Query: 307 PKNA---SLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPD----VYLIVAGSGP----WEQ 355
           P      S+V+G  GRL   K  P L  AF+ L+ + P+    + L++ G GP     EQ
Sbjct: 187 PDFFADESVVVGTVGRLQAVKDQPTLVRAFALLVRQLPEGAERLRLVIVGDGPARGACEQ 246

Query: 356 RYKDFGHQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFP 415
             +  G   LV       ++ A   A+D+FV P+L  +G+  T++EAM SG PV+A+   
Sbjct: 247 MVRAAGLAHLVWLPGERDDVPALMQALDLFVLPSL-AEGISNTILEAMASGLPVIATA-- 303

Query: 416 SIKGT--IVVDDEFGFMFAP-NVESLHKTLEAAVSEGPMRLAQRGEACRQYAASMFTANK 472
            + G   +V     G +  P +  +L + L+  VS+   R A  G A R  A   F+ N 
Sbjct: 304 -VGGNPELVQHGVTGALVPPGDAVALARALQPYVSDPAARRAH-GAAGRARAEQQFSINA 361

Query: 473 MALAYERLF 481
           M  AY  L+
Sbjct: 362 MVAAYAGLY 370

Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. Length = 374

>gnl|CDD|99959 cd01635, Glycosyltransferase_GTB_type, Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds

 Score = 71.5 bits (175), Expect = 4e-14
 Identities = 39/117 (33%), Positives = 58/117 (49%), Gaps = 8/117 (6%)

Query: 316 VAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYK------DFGHQVLVMGS 369
             GRL  +KG   L EAF+ L  + PD+ L++AG GP  +  +          +V+ +G 
Sbjct: 109 FVGRLAPEKGLDDLIEAFALLKERGPDLKLVIAGDGPEREYLEELLAALLLLDRVIFLGG 168

Query: 370 MSPAELRA-FYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDD 425
           + P EL A    A D+FV P+LR  G  L ++EAM  G PV+A+        +    
Sbjct: 169 LDPEELLALLLAAADVFVLPSLRE-GFGLVVLEAMACGLPVIATDVGGPPEIVEDGL 224

The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. Length = 229

>gnl|CDD|99983 cd03812, GT1_CapH_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 73.4 bits (181), Expect = 4e-14
 Identities = 52/191 (27%), Positives = 95/191 (49%), Gaps = 24/191 (12%)

Query: 233 NKSLQGVMLKVLNEIRFFNKYA-HHVAISDSCGEMLRDVY-QIPSERVHVILNGINENEY 290
           +K  + +  KVL   +  N+ A  ++A S+  G+ L   + ++ +++  VI NGI+  ++
Sbjct: 119 DKKKKILKYKVL--RKLINRLATDYLACSEEAGKWL---FGKVKNKKFKVIPNGIDLEKF 173

Query: 291 GVDLSLGQSFRSRI---GIPKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIV 347
             +    +  R +    GI ++   V+G  GR  + K H  L E F++L+ K P+  L++
Sbjct: 174 IFN----EEIRKKRRELGILEDK-FVIGHVGRFSEQKNHEFLIEIFAELLKKNPNAKLLL 228

Query: 348 AGSGPWEQRYK------DFGHQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLME 401
            G G  E+  K          +V+ +G  +         A+D+F+ P+L  +GL L L+E
Sbjct: 229 VGDGELEEEIKKKVKELGLEDKVIFLGVRNDVP--ELLQAMDVFLFPSLY-EGLPLVLIE 285

Query: 402 AMMSGKPVMAS 412
           A  SG P + S
Sbjct: 286 AQASGLPCILS 296

capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1). Length = 358

>gnl|CDD|222322 pfam13692, Glyco_trans_1_4, Glycosyl transferases group 1

 Score = 68.5 bits (168), Expect = 5e-14
 Identities = 35/137 (25%), Positives = 59/137 (43%), Gaps = 7/137 (5%)

Query: 312 LVLGVAGRLVKDKG-HPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDFGHQVLVMGSM 370
           + +G  G      G   LL EA   L    PDV L + GSGP  +        V  +G +
Sbjct: 3   VFIGGFGHAPNWDGLLWLLEEALPLLRKALPDVELHIIGSGP--EELARLAPNVHFLGFV 60

Query: 371 SPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFM 430
              +L A   + D+ + P     G  L L+EA+ +G PV+A+   +    +  D  +G +
Sbjct: 61  --EDLAALLASADVALAPLRFGAGSPLKLLEALAAGLPVVATDIGA--EGLPEDLGWGVL 116

Query: 431 FAPNVESLHKTLEAAVS 447
            A + E   + +   ++
Sbjct: 117 VADDPEEFAEAIVRLLA 133

Length = 134

>gnl|CDD|234487 TIGR04157, glyco_rSAM_CFB, glycosyltransferase, GG-Bacteroidales peptide system

 Score = 73.1 bits (180), Expect = 6e-14
 Identities = 45/175 (25%), Positives = 74/175 (42%), Gaps = 15/175 (8%)

Query: 246 EIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGI----NENEYGVDLSLGQSFR 301
           E   F      + +S     +L + Y IP E++ VI NG+              L +   
Sbjct: 163 EKEMFQLADRVICLSQYTQNLLYEDYGIPKEKIVVIYNGLTDEAIYLSEVERKKLRKKL- 221

Query: 302 SRIGIPKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRY---- 357
              G  ++  ++L V GRL + KG   L EAF  ++ K P+  L++ G G +  RY    
Sbjct: 222 ---GFSEDEKIILFV-GRLDEIKGVDYLIEAFKIVLKKDPNCRLVIVGDGDY-SRYLQEC 276

Query: 358 KDFGHQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMAS 412
           K    ++   G +   +L   Y   D+ V P+   Q      +E MM G P++ +
Sbjct: 277 KKIWSKITFTGKLDKEKLYELYQIADVGVLPSFHEQ-CSYVAIEMMMHGLPLIGT 330

Members of this protein family are predicted glycosyltransferases that occur in conserved gene neighborhoods in various members of the Bacteroidales. These neighborhoods feature a radical SAM enzyme predicted to act in peptide modification (family TIGR04148), peptides from family TIGR04149 with a characteristic GG cleavage motif, and several other proteins. Length = 406

>gnl|CDD|185381 PRK15484, PRK15484, lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional

 Score = 71.4 bits (175), Expect = 2e-13
 Identities = 46/186 (24%), Positives = 90/186 (48%), Gaps = 25/186 (13%)

Query: 265 EMLRDVYQ--IPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVAGRLVK 322
           + L+  Y+  +P+  + ++ NG     Y  +     + R ++ I  + +++L  AGR+  
Sbjct: 148 QFLKKFYEERLPNADISIVPNGFCLETYQSNPQ--PNLRQQLNISPDETVLL-YAGRISP 204

Query: 323 DKGHPLLHEAFSKLMVKYPDVYLIVAG---------SGPWEQRYKD----FGHQVLVMGS 369
           DKG  LL +AF KL   + ++ L+V G            ++++  +     G + +++G 
Sbjct: 205 DKGILLLMQAFEKLATAHSNLKLVVVGDPTASSKGEKAAYQKKVLEAAKRIGDRCIMLGG 264

Query: 370 MSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTI---VVDDE 426
             P ++  +Y   D+ V P+   +   +  +EAM +GKPV+AS     KG I   V++  
Sbjct: 265 QPPEKMHNYYPLADLVVVPSQVEEAFCMVAVEAMAAGKPVLAST----KGGITEFVLEGI 320

Query: 427 FGFMFA 432
            G+  A
Sbjct: 321 TGYHLA 326

Length = 380

>gnl|CDD|233748 TIGR02149, glgA_Coryne, glycogen synthase, Corynebacterium family

 Score = 71.4 bits (175), Expect = 2e-13
 Identities = 69/241 (28%), Positives = 109/241 (45%), Gaps = 35/241 (14%)

Query: 257 VAISDSCGE-MLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLG 315
           +A+S    E +L+    +  E+VHVI NGI+  EY  D   G     R GI ++   +L 
Sbjct: 149 IAVSGGMREDILKYYPDLDPEKVHVIYNGIDTKEYKPD--DGNVVLDRYGIDRSRPYILF 206

Query: 316 VAGRLVKDKGHPLLHEAFSKLMVKY--PDVYLIVAGSGP------WEQRYKDFGHQ---- 363
           V GR+ + KG P L +A     V Y   DV +++    P       E R           
Sbjct: 207 V-GRITRQKGVPHLLDA-----VHYIPKDVQVVLCAGAPDTPEVAEEVRQAVALLDRNRT 260

Query: 364 -VLVMGSMSP-AELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTI 421
            ++ +  M P  EL    +  ++FV P++  + L +  +EAM  G PV+AS    I   +
Sbjct: 261 GIIWINKMLPKEELVELLSNAEVFVCPSIY-EPLGIVNLEAMACGTPVVASATGGIP-EV 318

Query: 422 VVDDEFGFMFAPN-------VESLHKTLEAAVSEGPMRLAQR-GEACRQYAASMFTANKM 473
           VVD E GF+  P+          L K +   +++    LA++ G A R+ A   F+   +
Sbjct: 319 VVDGETGFLVPPDNSDADGFQAELAKAINILLAD--PELAKKMGIAGRKRAEEEFSWGSI 376

Query: 474 A 474
           A
Sbjct: 377 A 377

This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 388

>gnl|CDD|234452 TIGR04063, stp3, PEP-CTERM/exosortase A-associated glycosyltransferase, Daro_2409 family

 Score = 69.2 bits (170), Expect = 1e-12
 Identities = 49/204 (24%), Positives = 95/204 (46%), Gaps = 19/204 (9%)

Query: 273 IPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVAGRLVKDKGHPLLHEA 332
           IP+E++ VI N ++ + +G+      +  + +G+    + V+G  G     +G  LL  A
Sbjct: 177 IPAEKITVIPNAVDLDLFGLPAPRDPALAAELGLEG--APVIGFIGSFYAYEGLDLLVAA 234

Query: 333 FSKLMVKYPDVYLIVAGSGPWEQRYKD------FGHQVLVMGSMSPAELRAFYNAIDIFV 386
             +L+ ++PD  L++ G GP E+  +          +V+  G +   E+  +Y+ ID+  
Sbjct: 235 LPRLLRRHPDARLLLVGGGPQEEALRAQAAALGLADRVVFTGRVPHDEVERYYSLIDVLA 294

Query: 387 NPTLRPQGLDLTL----MEAMMSGKPVMASRFPSIKG--TIVVDDEFGFMFAP-NVESLH 439
            P L  +  +L      +EAM  G+ V AS    + G   ++ D E G +F   +  +L 
Sbjct: 295 YPRLPMRLTELVTPLKPLEAMAQGRLVAAS---DVGGHRELIRDGETGVLFPAGDPAALA 351

Query: 440 KTLEAAVSEGPMRLAQRGEACRQY 463
             L  A+ +   +  +   A R++
Sbjct: 352 AAL-LALLDNRAQWPELRAAARRF 374

PEP-CTERM/exosortase is a protein-sorting system associated with exopolysaccharide production. Members of this protein family are group 1 glycosyltransferases (see pfam00534) in which the overwhelming majority occur in species with the EpsH1 form of exosortase (see TIGR03109), and usually co-clustered with the exosortase. A typical member is Daro_2409 from Dechloromonas aromatica RCB. Length = 397

>gnl|CDD|222130 pfam13439, Glyco_transf_4, Glycosyltransferase Family 4

 Score = 64.4 bits (157), Expect = 3e-12
 Identities = 46/193 (23%), Positives = 68/193 (35%), Gaps = 32/193 (16%)

Query: 98  TPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGE 157
             GG+ER    L  ALARRGH V +       +  P    +E         P L F    
Sbjct: 10  KFGGVERVVLELARALARRGHEVTVVAP---ELGRP---LEEELGVILVSVPGLSFK--- 60

Query: 158 ADKWRYSKGWEQFDEENQREPFDVVHSESVALPHWLARNVTNLAVSWHGIALESLQSGIF 217
               R            ++E FD+VHS         A       ++ HG         I+
Sbjct: 61  -RALRSPAFVFALRRLLKKERFDLVHSHH-PAALLFAD--VPAVLTVHGT---WPLRFIY 113

Query: 218 QDLTRKPLEPMSLAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSER 277
             L   P E + L               E R F +    +A+S+   + L   Y +P E+
Sbjct: 114 SSL--SPYEVLELPL-------------ERRLFRRADAVIAVSEEVADELAR-YGVPEEK 157

Query: 278 VHVILNGINENEY 290
           + VI NG++   +
Sbjct: 158 IRVIPNGVDTERF 170

Length = 171

>gnl|CDD|99992 cd03822, GT1_ecORF704_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 67.3 bits (165), Expect = 4e-12
 Identities = 79/425 (18%), Positives = 132/425 (31%), Gaps = 88/425 (20%)

Query: 85  KIAVFSRKWPISTTP---GGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQEND 141
           +IA+      +S  P    G+      L  AL+ RG  V +           S++     
Sbjct: 1   RIAL------VSPYPPRKCGIATFTTDLVNALSARGPDVLV----------VSVAALYPS 44

Query: 142 DGSNNKYPLLHFHEGEADKWRYSKGWEQFDEENQREPFDVVHSESVALPHWLARNVTNLA 201
                +  +                           P DVV      + H          
Sbjct: 45  LLYGGEQEV----VRVIVLDNPLDYRRAARAIRLSGP-DVVV-----IQHEYGI----FG 90

Query: 202 VSWHGIALESLQSGIFQDLTRKPL----------EPMSLAFNKSLQGVMLKVLNEIRFFN 251
                  L              P+          EP      +     +L+         
Sbjct: 91  GEAGLYLLL------LLRGLGIPVVVTLHTVLLHEP------RPGDRALLR-----LLLR 133

Query: 252 KYAHHVAISDSCGEMLRDVY-QIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNA 310
           +    + +S    E+LR +  +   E++ VI +G+ +                +G     
Sbjct: 134 RADAVIVMSS---ELLRALLLRAYPEKIAVIPHGVPDPPAE-----PPESLKALGGLDGR 185

Query: 311 SLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGS--GPWEQRYKDFGHQVLVMG 368
             VL   G L   KG  LL EA   L+ K+PDV L+VAG      E+   +       +G
Sbjct: 186 -PVLLTFGLLRPYKGLELLLEALPLLVAKHPDVRLLVAGETHPDLERYRGEAYALAERLG 244

Query: 369 ----------SMSPAELRAFYNAIDIFVNPTL-RPQGLDLTLMEAMMSGKPVMASRFPSI 417
                      +   EL   ++A D+ V P     Q     L  A+  GKPV+++     
Sbjct: 245 LADRVIFINRYLPDEELPELFSAADVVVLPYRSADQTQSGVLAYAIGFGKPVISTPVGH- 303

Query: 418 KGTIVVDDEFGFMFAP-NVESLHKTLEAAVSEGPMRLAQRGEACRQYAASMFTANKMALA 476
               V+D   G +  P +  +L + +   +   P          R+YA +M +  ++A  
Sbjct: 304 -AEEVLDGGTGLLVPPGDPAALAEAIR-RLLADPELAQALRARAREYARAM-SWERVAER 360

Query: 477 YERLF 481
           Y RL 
Sbjct: 361 YLRLL 365

ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. Length = 366

>gnl|CDD|100002 cd04962, GT1_like_5, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 62.6 bits (153), Expect = 1e-10
 Identities = 102/398 (25%), Positives = 159/398 (39%), Gaps = 81/398 (20%)

Query: 112 ALARRGHRVHIFTS--PV--DNINSPSISHQENDDGSNNKYPLLHFHEGEADKWRYSKGW 167
           ALARRGH VH  TS  P   D  +     H+        +YPL  F     D    SK  
Sbjct: 24  ALARRGHEVHFITSSRPFRLDEYSPNIFFHEVE----VPQYPL--FQYPPYDLALASK-- 75

Query: 168 EQFDEENQREPFDVVHSESVALPH----WLARN---------VTNLAVSWHGIALESLQS 214
               E  +R   D++H    A+PH    +LAR          VT L    HG        
Sbjct: 76  --IAEVAKRYKLDLLHVH-YAVPHAVAAYLAREILGKKDLPVVTTL----HG-------- 120

Query: 215 GIFQDLTRKPLEPMSLAFNKSLQGVMLKVLNEIRF-FNKYAHHVAISDSCGEMLRDVYQI 273
               D+T        +  + S Q          RF   K     A+S+S  +   +++ I
Sbjct: 121 ---TDIT-------LVGQDPSFQPA-------TRFSIEKSDGVTAVSESLRQETYELFDI 163

Query: 274 PSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVAG-RLVKDKGHPLLHEA 332
             E + VI N ++E+ +       ++ + R+G P+   +++ ++  R VK      +   
Sbjct: 164 TKE-IEVIPNFVDEDRFRPKP--DEALKRRLGAPEGEKVLIHISNFRPVKRI--DDVIRI 218

Query: 333 FSKLMVKYPDVYLIVAGSGP------WEQRYKDFGHQVLVMGSMSPAELRAFYNAIDIFV 386
           F+K+  + P   L+V G GP         R       VL +G     E     +  D+F+
Sbjct: 219 FAKVRKEVPARLLLV-GDGPERSPAERLARELGLQDDVLFLGKQDHVE--ELLSIADLFL 275

Query: 387 NPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAP-NVESLHKTLEAA 445
            P+ + +   L  +EAM  G PV+AS    I   +V   E GF+    +VE++    E A
Sbjct: 276 LPSEK-ESFGLAALEAMACGVPVVASNAGGIP-EVVKHGETGFLVDVGDVEAMA---EYA 330

Query: 446 VS--EGPMRLAQRGEACRQYAASMFTANKMALAYERLF 481
           +S  E      +   A R  AA  F + ++   YE L+
Sbjct: 331 LSLLEDDELWQEFSRAARNRAAERFDSERIVPQYEALY 368

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria, while some of them are also found in Archaea and eukaryotes. Length = 371

>gnl|CDD|99976 cd03804, GT1_wbaZ_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 61.0 bits (149), Expect = 4e-10
 Identities = 50/154 (32%), Positives = 65/154 (42%), Gaps = 20/154 (12%)

Query: 317 AGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDF-GHQVLVMGSMSPAEL 375
            GRLV  K   L  EAF+KL  +     L+V G GP   R +   G  V  +G +S  EL
Sbjct: 201 VGRLVPYKRIDLAIEAFNKLGKR-----LVVIGDGPELDRLRAKAGPNVTFLGRVSDEEL 255

Query: 376 RAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKG---TIVVDDEFGFMFA 432
           R  Y     F+ P     G+    +EAM SG PV+A      KG     V+D   G +F 
Sbjct: 256 RDLYARARAFLFPAEEDFGI--VPVEAMASGTPVIAYG----KGGALETVIDGVTGILFE 309

Query: 433 P-NVESLHKTLEAAVSEGPMRLAQRGEACRQYAA 465
              VESL   +E              +A R +A 
Sbjct: 310 EQTVESLAAAVERFEKNE----DFDPQAIRAHAE 339

wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. Length = 351

>gnl|CDD|234448 TIGR04047, MSMEG_0565_glyc, glycosyltransferase, MSMEG_0565 family

 Score = 61.3 bits (149), Expect = 4e-10
 Identities = 54/229 (23%), Positives = 92/229 (40%), Gaps = 33/229 (14%)

Query: 256 HVAISDSCGEMLRDVYQIPSERVHVILNGINENEY-----GVDLSLGQSFRSRIGIPKNA 310
            + +S +    LR  + I +  V    NG++   +       D +L +    R G     
Sbjct: 142 VLCVSAAWAAELRAEWGIDATVVP---NGVDAARFSPAADAADAALRRRLGLRGG----- 193

Query: 311 SLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGS------GPWEQRYKDFGHQ- 363
             VL V G +   K    L EAF+ L  + P   L++AG         + + ++    + 
Sbjct: 194 PYVLAVGG-IEPRKNTIDLLEAFALLRARRPQAQLVIAGGATLFDYDAYRREFEARAAEL 252

Query: 364 ------VLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSI 417
                 V++ G +  A+L A Y   D F  P+L+ +G  L ++EA+ SG PV+AS     
Sbjct: 253 GLDPGAVVITGPVPDADLPALYRCADAFAFPSLK-EGFGLVVLEALASGIPVVASDIAPF 311

Query: 418 KGTIVVDDEFG-FMFAPNVESLHKTLEAAVSE--GPMRLAQRGEACRQY 463
             T  +      +    + +S+   L  A+     P  LA   E   +Y
Sbjct: 312 --TEYLGRFDAAWADPSDPDSIADALALALDPARRPALLAAGPELAARY 358

A conserved gene cluster found sporadically from Actinobacteria to Proteobacteria to Cyanobacteria features a radical SAM protein, an N-acetyltransferase, an oxidoreductase, and two additional proteins whose functional classes are unclear. The metabolic role of the cluster is probably biosynthetic. This glycosyltransferase, named from member MSMEG_0565 from Mycobacterium smegmatis, occurs in most but not all instances of the cluster [Unknown function, Enzymes of unknown specificity]. Length = 373

>gnl|CDD|222237 pfam13579, Glyco_trans_4_4, Glycosyl transferase 4-like domain

 Score = 55.9 bits (135), Expect = 3e-09
 Identities = 46/193 (23%), Positives = 69/193 (35%), Gaps = 43/193 (22%)

Query: 100 GGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEAD 159
           GG ER+   L  ALA RGH V + T        P    +  +DG      +         
Sbjct: 1   GGAERYVLELARALAARGHEVTVVTPR-----GPPGRPELEEDG----VRVHRLPVPRRP 51

Query: 160 KWRYS-KGWEQFDEENQREPFDVVHSES--VALPHWLARNVTN--LAVSWHGIALE---S 211
                 +   +     +RE  DVVH+      L   LA       + V+ HG+AL     
Sbjct: 52  SLPGDLRALRRLRRLLRRERPDVVHAHGPLAGLLARLAARRRGVPVVVTPHGLALRQGSG 111

Query: 212 LQSGIFQDLTRKPLEPMSLAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVY 271
           L+  + + L R                         R   +    VA+S++  E+LR   
Sbjct: 112 LKRRLARALER-------------------------RLLRRADAVVAVSEAEAELLRA-L 145

Query: 272 QIPSERVHVILNG 284
            +P+ RV V+ NG
Sbjct: 146 GVPAARVVVVPNG 158

Length = 158

>gnl|CDD|100001 cd04955, GT1_like_6, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 58.4 bits (142), Expect = 3e-09
 Identities = 60/244 (24%), Positives = 94/244 (38%), Gaps = 37/244 (15%)

Query: 252 KYAHHVAISDSCG--EMLRDVYQIPSERVHVILNGINENEYGVDL---SLGQSFRSRIGI 306
           K+A  + I+DS G  E L++ Y   S     I        YG D    S       + G+
Sbjct: 142 KFADRL-IADSPGIKEYLKEKYGRDS---TYI-------PYGADHVVSSEEDEILKKYGL 190

Query: 307 -PKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWE--------QRY 357
            P    L++G   R+V +     L EAFSK         L++ G+            ++ 
Sbjct: 191 EPGRYYLLVG---RIVPENNIDDLIEAFSKSNSGKK---LVIVGNADHNTPYGKLLKEKA 244

Query: 358 KDFGHQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSI 417
                 + V        L     A  +F        G + +L+EAM  G PV+AS  P  
Sbjct: 245 AADPRIIFVGPIYDQELLELLRYA-ALFYLHGHSVGGTNPSLLEAMAYGCPVLASDNPFN 303

Query: 418 KGTIVVDDEFGFMFAPNVESLHKTLEAAVSEGPMRLAQRGEACRQYAASMFTANKMALAY 477
           +  +  D    F    ++ SL + LEA     P  ++   +A R+     +T  K+A  Y
Sbjct: 304 REVL-GDKAIYFKVGDDLASLLEELEAD----PEEVSAMAKAARERIREKYTWEKIADQY 358

Query: 478 ERLF 481
           E L+
Sbjct: 359 EELY 362

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found in certain bacteria and Archaea. Length = 363

>gnl|CDD|234438 TIGR03999, thiol_BshA, N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA

 Score = 57.6 bits (140), Expect = 6e-09
 Identities = 101/408 (24%), Positives = 161/408 (39%), Gaps = 93/408 (22%)

Query: 109 LHVALARRGHRVHIFTS--PV--DNINSPSISHQENDDGSNNKYPLLHF--HEGEADKWR 162
           L  ALA RGH VH  TS  P   +  +     H+       N+YPL  +  ++       
Sbjct: 21  LGKALAERGHEVHFITSSQPFRLEKFHPNIFFHEVE----VNQYPLFQYPPYDLALA--- 73

Query: 163 YSKGWEQFDEENQREPFDVVHSESVALPH----WLARN-----------VTNLAVSWHG- 206
            SK  E   EE      D++H    A+PH    +LAR            VT L    HG 
Sbjct: 74  -SKIAEVAKEEK----LDLLHVH-YAIPHAIAAYLARQMLGKEGIDIPIVTTL----HGT 123

Query: 207 -IALESLQSGIFQDLTRKPLEPMSLAFNKSLQGVMLKVLNEIRFFNKYAHHV-AISDSCG 264
            I L       F+   R        +  KS                     V A+S+S  
Sbjct: 124 DITLVGADPS-FKPAVR-------FSIEKS-------------------DGVTAVSESLK 156

Query: 265 EMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVAG-RLVKD 323
           E   +++ I    + VI N ++ + Y        + + ++G P++  +++ ++  R VK 
Sbjct: 157 EETYELFDIDKP-IEVIPNFVDTDRYRRKND--PALKRKLGAPEDEKVLIHISNFRPVKR 213

Query: 324 KGHPLLHEAFSKLMVKYPDVYLIVAGSGP------WEQRYKDFGHQVLVMGSMSP-AELR 376
               +  E F+++  + P   L++ G GP         R      +VL +G     AEL 
Sbjct: 214 VEDVI--EVFARVQQEVPAK-LLLVGDGPERSPAEQLVRELGLTDRVLFLGKQDDVAEL- 269

Query: 377 AFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAP-NV 435
              +  D+F+ P+   +   L  +EAM  G PV+AS    I   +V     GF+    +V
Sbjct: 270 --LSISDLFLLPS-EKESFGLAALEAMACGVPVIASNAGGIP-EVVEHGVTGFLCDVGDV 325

Query: 436 ESLHKTLEAAVS--EGPMRLAQRGEACRQYAASMFTANKMALAYERLF 481
           E++    E A+S  E    L +   A R+ A   F + K+   YE L+
Sbjct: 326 ETMA---EYAISLLEDEELLQRFSAAARERAKERFDSEKIVPQYEALY 370

Members of this protein family are BshA, a glycosyltransferase required for bacillithiol biosynthesis. This enzyme combines UDP-GlcNAc and L-malate to form N-acetyl-alpha-D-glucosaminyl L-malate synthase. Bacillithiol is a low-molecular-weight thiol, an analog of glutathione and mycothiol, and is found largely in the Firmicutes [Biosynthesis of cofactors, prosthetic groups, and carriers, Glutathione and analogs]. Length = 374

>gnl|CDD|215469 PLN02871, PLN02871, UDP-sulfoquinovose:DAG sulfoquinovosyltransferase

 Score = 53.6 bits (129), Expect = 1e-07
 Identities = 52/197 (26%), Positives = 83/197 (42%), Gaps = 21/197 (10%)

Query: 247 IRFFNKYAH-HVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRS--- 302
           IRF ++ A   +  S + G+ L       + R+ V   G++        S    FRS   
Sbjct: 199 IRFLHRAADLTLVTSPALGKELEAAGVTAANRIRVWNKGVDSE------SFHPRFRSEEM 252

Query: 303 --RIGIPKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDF 360
             R+   +    ++   GRL  +K    L      +M + P   L   G GP+ +  +  
Sbjct: 253 RARLSGGEPEKPLIVYVGRLGAEKNLDFLKR----VMERLPGARLAFVGDGPYREELEKM 308

Query: 361 --GHQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIK 418
             G   +  G +   EL   Y + D+FV P+   + L   ++EAM SG PV+A+R   I 
Sbjct: 309 FAGTPTVFTGMLQGDELSQAYASGDVFVMPS-ESETLGFVVLEAMASGVPVVAARAGGIP 367

Query: 419 GTIVVDDE--FGFMFAP 433
             I  D E   GF++ P
Sbjct: 368 DIIPPDQEGKTGFLYTP 384

Length = 465

>gnl|CDD|233724 TIGR02095, glgA, glycogen/starch synthase, ADP-glucose type

 Score = 53.4 bits (129), Expect = 1e-07
 Identities = 61/268 (22%), Positives = 99/268 (36%), Gaps = 52/268 (19%)

Query: 253 YAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEY--GVDLSLG------------- 297
           YA  + ++   G  L  V +  S ++  ILNGI+   +    D  L              
Sbjct: 216 YAREI-LTPEFGYGLDGVLKARSGKLRGILNGIDTEVWNPATDPYLKANYSADDLAGKAE 274

Query: 298 --QSFRSRIGIPKNASL-VLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGP-- 352
             ++ +  +G+P +  + + GV  RL + KG  LL  A  +L+       L+V G+G   
Sbjct: 275 NKEALQEELGLPVDDDVPLFGVISRLTQQKGVDLLLAALPELLEL--GGQLVVLGTGDPE 332

Query: 353 -------WEQRYKDFGHQVLVMGSMSPAELRAFYNAIDIFVNPT-LRPQGLDLTLMEAMM 404
                    +RY      V V+     A     Y   D  + P+   P G  LT + AM 
Sbjct: 333 LEEALRELAERY---PGNVRVIIGYDEALAHLIYAGADFILMPSRFEPCG--LTQLYAMR 387

Query: 405 SGKPVMASRFPSIKGTIV-----VDDEFGFMF-APNVESLHKTLEAAVSEGPMRL-AQRG 457
            G   +  R   +  T+V      +   GF+F   +  +L   L  A+     RL  Q  
Sbjct: 388 YGTVPIVRRTGGLADTVVDGDPEAESGTGFLFEEYDPGALLAALSRAL-----RLYRQDP 442

Query: 458 EACRQYA----ASMFTANKMALAYERLF 481
                      +  F+ +K A  Y  L+
Sbjct: 443 SLWEALQKNAMSQDFSWDKSAKQYVELY 470

This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 473

>gnl|CDD|99970 cd03796, GT1_PIG-A_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 53.0 bits (128), Expect = 1e-07
 Identities = 55/201 (27%), Positives = 91/201 (45%), Gaps = 23/201 (11%)

Query: 255 HHVAISDSCGE--MLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASL 312
           H + +S +  E  +LR    +  ERV VI N        VD S    F        N  +
Sbjct: 147 HVICVSHTSKENTVLRA--SLDPERVSVIPNA-------VDSSD---FTPDPSKRDNDKI 194

Query: 313 VLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGP----WEQRYKDFGHQ--VLV 366
            + V  RLV  KG  LL     ++  K+P+V  I+ G GP     E+  + +  Q  V +
Sbjct: 195 TIVVISRLVYRKGIDLLVGIIPEICKKHPNVRFIIGGDGPKRILLEEMREKYNLQDRVEL 254

Query: 367 MGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDE 426
           +G++    +R       IF+N +L  +   + ++EA   G  V+++R   I    V+  +
Sbjct: 255 LGAVPHERVRDVLVQGHIFLNTSL-TEAFCIAIVEAASCGLLVVSTRVGGIPE--VLPPD 311

Query: 427 FGFMFAPNVESLHKTLEAAVS 447
              +  P+VES+ + LE A+S
Sbjct: 312 MILLAEPDVESIVRKLEEAIS 332

Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder. Length = 398

>gnl|CDD|99965 cd03791, GT1_Glycogen_synthase_DULL1_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 52.9 bits (128), Expect = 2e-07
 Identities = 62/257 (24%), Positives = 102/257 (39%), Gaps = 44/257 (17%)

Query: 260 SDSCGEMLRDVYQIPSERVHVILNGINENE------------YGVDLSLG-----QSFRS 302
           +   GE L  + +  + ++  ILNGI+ +             Y  D   G      + + 
Sbjct: 227 TPEFGEGLDGLLRARAGKLSGILNGIDYDVWNPATDPHLPANYSADDLEGKAENKAALQE 286

Query: 303 RIGIPKNAS-LVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPW--EQRYKD 359
            +G+P +    + G  GRL + KG  LL EA  +L+       L++ GSG    E+  ++
Sbjct: 287 ELGLPVDPDAPLFGFVGRLTEQKGIDLLLEALPELLEL--GGQLVILGSGDPEYEEALRE 344

Query: 360 F----GHQVLVMGSMSPAELRAFYNAIDIFVNPTLR-PQGLDLTLMEAMMSGKPVMASRF 414
                  +V V+     A     Y   D F+ P+   P G  LT M AM  G   +    
Sbjct: 345 LAARYPGRVAVLIGYDEALAHLIYAGADFFLMPSRFEPCG--LTQMYAMRYGTVPIVRAT 402

Query: 415 PSIKGTIVVDDEF-----GFMF-APNVESLHKTLEAAVSEGPMRLAQRGEA----CRQYA 464
             +  T++  +E      GF+F   N ++L   L  A     + L +  EA     R   
Sbjct: 403 GGLADTVIDYNEDTGEGTGFVFEGYNADALLAALRRA-----LALYRDPEAWRKLQRNAM 457

Query: 465 ASMFTANKMALAYERLF 481
           A  F+ ++ A  Y  L+
Sbjct: 458 AQDFSWDRSAKEYLELY 474

Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. Length = 476

>gnl|CDD|132490 TIGR03449, mycothiol_MshA, D-inositol-3-phosphate glycosyltransferase

 Score = 51.3 bits (123), Expect = 6e-07
 Identities = 50/196 (25%), Positives = 79/196 (40%), Gaps = 21/196 (10%)

Query: 301 RSRIGIPKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVA------GSG--- 351
           R+R+G+P +  +V  V GR+   K   +L  A ++L+ + PD  L V       GSG   
Sbjct: 210 RARLGLPLDTKVVAFV-GRIQPLKAPDVLLRAVAELLDRDPDRNLRVIVVGGPSGSGLAT 268

Query: 352 PWEQR----YKDFGHQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGK 407
           P              +V  +    P EL   Y A D+   P+   +   L  MEA   G 
Sbjct: 269 PDALIELAAELGIADRVRFLPPRPPEELVHVYRAADVVAVPSYN-ESFGLVAMEAQACGT 327

Query: 408 PVMASRFPSIKGTIVVDDEFGFMF-APNVESLHKTLEAAVSEGPMRLAQRGEACRQYAAS 466
           PV+A+R   +    V D E G +    +       L   + +   R  + G A  ++AA 
Sbjct: 328 PVVAARVGGL-PVAVADGETGLLVDGHDPADWADALARLLDDPRTR-IRMGAAAVEHAAG 385

Query: 467 M---FTANKMALAYER 479
                TA+ +  +Y  
Sbjct: 386 FSWAATADGLLSSYRD 401

Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. Length = 405

>gnl|CDD|185325 PRK15427, PRK15427, colanic acid biosynthesis glycosyltransferase WcaL; Provisional

 Score = 47.8 bits (114), Expect = 8e-06
 Identities = 41/155 (26%), Positives = 70/155 (45%), Gaps = 21/155 (13%)

Query: 274 PSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVAGRLVKDKGHPLLHEAF 333
           P E++ V   G++   +        S R     P     ++ VA RL + KG  +  EA 
Sbjct: 195 PPEKIAVSRMGVDMTRF--------SPRPV-KAPATPLEIISVA-RLTEKKGLHVAIEAC 244

Query: 334 SKLMVKYPDVYLIVAGSGPWEQRYKDFGHQ-----VLVMGSMSPA-ELRAFYNAIDIFVN 387
            +L  +       + G GPWE+R +    Q     V+ M    P+ E++A  +  D+F+ 
Sbjct: 245 RQLKEQGVAFRYRILGIGPWERRLRTLIEQYQLEDVVEMPGFKPSHEVKAMLDDADVFLL 304

Query: 388 PTLRP-----QGLDLTLMEAMMSGKPVMASRFPSI 417
           P++       +G+ + LMEAM  G PV+++    I
Sbjct: 305 PSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSGI 339

Length = 406

>gnl|CDD|188520 TIGR04005, wcaL, colanic acid biosynthesis glycosyltransferase WcaL

 Score = 46.4 bits (110), Expect = 2e-05
 Identities = 42/151 (27%), Positives = 72/151 (47%), Gaps = 23/151 (15%)

Query: 274 PSERVHVILNGINENEYGVDLSLGQSFRSR-IGIPKNASLVLGVAGRLVKDKGHPLLHEA 332
           P E++ V       +  GVD++    F  R +  P     ++ VA RL + KG  +  EA
Sbjct: 195 PPEKIAV-------SRMGVDMT---RFTHRPVKAPGTPLEIISVA-RLTEKKGLHVAIEA 243

Query: 333 FSKLMVKYPDVYLIVAGSGPWEQRYKDFGHQ-----VLVMGSMSPA-ELRAFYNAIDIFV 386
             +L  +       + G GPWE+R +    Q     V+ M    P+ E++A  +  D+F+
Sbjct: 244 CRQLKAQGVAFRYRILGIGPWERRLRTLIEQYQLEDVVEMPGFKPSHEVKAMLDDADVFL 303

Query: 387 NPTLRP-----QGLDLTLMEAMMSGKPVMAS 412
            P++       +G+ + LMEAM  G PV+++
Sbjct: 304 LPSVTGTDGDMEGIPVALMEAMAVGIPVVST 334

This gene is one of the glycosyl transferases involved in the biosynthesis of colanic acid, an exopolysaccharide expressed in Enterobacteraceae species. Length = 406

>gnl|CDD|99998 cd04949, GT1_gtfA_like, This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding

 Score = 45.3 bits (108), Expect = 5e-05
 Identities = 41/165 (24%), Positives = 75/165 (45%), Gaps = 17/165 (10%)

Query: 317 AGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKD------FGHQVLVMGSM 370
             RL  +K    L +AF+K++ + PD  L + G G  E++ K+          V + G  
Sbjct: 210 VARLAPEKQLDQLIKAFAKVVKQVPDATLDIYGYGDEEEKLKELIEELGLEDYVFLKG-Y 268

Query: 371 SPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRF---PSIKGTIVVDDEF 427
           +      +  A  + +  T + +G  L+LMEA+  G PV++      PS    I+ D E 
Sbjct: 269 TRDLDEVYQKA-QLSLL-TSQSEGFGLSLMEALSHGLPVISYDVNYGPS---EIIEDGEN 323

Query: 428 GFMFAP-NVESLHKTLEAAVSEGPMRLAQRGEACRQYAASMFTAN 471
           G++    ++E+L + +   +++ P  L +  EA  + A      N
Sbjct: 324 GYLVPKGDIEALAEAIIELLND-PKLLQKFSEAAYENAERYSEEN 367

In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found in bacteria. Length = 372

>gnl|CDD|185101 PRK15179, PRK15179, Vi polysaccharide biosynthesis protein TviE; Provisional

 Score = 43.9 bits (103), Expect = 2e-04
 Identities = 49/226 (21%), Positives = 85/226 (37%), Gaps = 30/226 (13%)

Query: 273 IPSERVHVILNGINENEYGVDLSLGQS---------FRSRIGIPKNASLVLGVAGRLVKD 323
           +   R+ V+ NG+        L   Q          F +R     +A   +G   R+  +
Sbjct: 479 VDERRIPVVYNGL------APLKSVQDDACTAMMAQFDARTS---DARFTVGTVMRVDDN 529

Query: 324 KGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDF------GHQVLVMGSMSPAELRA 377
           K   L  EA  +    +P V  I+ G GP  +  ++F      G ++L  G      +  
Sbjct: 530 KRPFLWVEAAQRFAASHPKVRFIMVGGGPLLESVREFAQRLGMGERILFTGLSR--RVGY 587

Query: 378 FYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAPNVES 437
           +    + F+  + R +GL   L+EA  SG PV+ +      G  V +   G     +  +
Sbjct: 588 WLTQFNAFLLLS-RFEGLPNVLIEAQFSGVPVV-TTLAGGAGEAVQEGVTGLTLPADTVT 645

Query: 438 LHKTLEAAVSEGPMRLAQRG--EACRQYAASMFTANKMALAYERLF 481
                EA      M  A  G       +A++ F+ N+M  +  R +
Sbjct: 646 APDVAEALARIHDMCAADPGIARKAADWASARFSLNQMIASTVRCY 691

Length = 694

>gnl|CDD|223374 COG0297, GlgA, Glycogen synthase [Carbohydrate transport and metabolism]

 Score = 43.0 bits (102), Expect = 3e-04
 Identities = 46/234 (19%), Positives = 75/234 (32%), Gaps = 71/234 (30%)

Query: 264 GEMLRDVYQIPSERVHVILNGINENEY--GVDLSLGQSF---------------RSRIGI 306
           GE L  +    S ++  ILNGI+ + +    D  +  ++               + R+G+
Sbjct: 229 GEGLEGLLSWRSGKLSGILNGIDYDLWNPETDPYIAANYSAEVLPAKAENKVALQERLGL 288

Query: 307 PKNASLVL-GVAGRLVKDKG------------------------HPLLHEAFSKLMVKYP 341
             +    L G   RL   KG                         P L EA   L  ++P
Sbjct: 289 DVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQGWQLVLLGTGDPELEEALRALASRHP 348

Query: 342 DVYLIVAGSGPWEQRYKDFGHQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLME 401
              L+V G                             Y   D+ + P+ R +   LT + 
Sbjct: 349 GRVLVVIG--------------------YDEPLAHLIYAGADVILMPS-RFEPCGLTQLY 387

Query: 402 AMMSGKPVMASRFPSIKGTIVVDDEF-------GFMFAP-NVESLHKTLEAAVS 447
           AM  G   +      +  T+V  +E+       GF+F   N + L   L  A+ 
Sbjct: 388 AMRYGTLPIVRETGGLADTVVDRNEWLIQGVGTGFLFLQTNPDHLANALRRALV 441

Length = 487

>gnl|CDD|99984 cd03813, GT1_like_3, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 42.6 bits (101), Expect = 3e-04
 Identities = 55/229 (24%), Positives = 88/229 (38%), Gaps = 38/229 (16%)

Query: 274 PSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVAGRLVKDKGHPLLHEAF 333
             E++ VI NGI+   +       ++   +         V+G+ GR+V  K       A 
Sbjct: 265 DPEKIRVIPNGIDPERFA---PARRARPEKEP------PVVGLIGRVVPIKDIKTFIRAA 315

Query: 334 SKLMVKYPDVYLIVAGSGPWEQRY--------KDFGHQ--VLVMGSMSPAELRAFYNAID 383
           + +  K PD    V G    +  Y        +  G +  V   G  +  E       +D
Sbjct: 316 AIVRKKIPDAEGWVIGPTDEDPEYAEECRELVESLGLEDNVKFTGFQNVKEY---LPKLD 372

Query: 384 IFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPS----IKGTIVVDDE----FGFMFAPNV 435
           + V  T   +G  L ++EAM +G PV+A+   S    I+G    DDE     G +  P  
Sbjct: 373 VLV-LTSISEGQPLVILEAMAAGIPVVATDVGSCRELIEG---ADDEALGPAGEVVPP-- 426

Query: 436 ESLHKTLEAAVS--EGPMRLAQRGEACRQYAASMFTANKMALAYERLFL 482
                   A +   + P      GEA R+     +T  +M  +Y RL+L
Sbjct: 427 ADPEALARAILRLLKDPELRRAMGEAGRKRVERYYTLERMIDSYRRLYL 475

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria, while some of them are also found in Archaea and eukaryotes. Length = 475

>gnl|CDD|99966 cd03792, GT1_Trehalose_phosphorylase, Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose

 Score = 42.2 bits (100), Expect = 4e-04
 Identities = 58/267 (21%), Positives = 105/267 (39%), Gaps = 36/267 (13%)

Query: 236 LQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVI------LNGINENE 289
           L     +V + ++ + +     A+     E +    Q+P  R  +I      L+G N   
Sbjct: 118 LSSPNRRVWDFLQPYIEDYDA-AVF-HLPEYVPP--QVP-PRKVIIPPSIDPLSGKN--- 169

Query: 290 YGVDLSLG--QSFRSRIGIPKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIV 347
              +LS    +    + GI      +  V+ R    K    + +A+ K+  + PD  L++
Sbjct: 170 --RELSPADIEYILEKYGIDPERPYITQVS-RFDPWKDPFGVIDAYRKVKERVPDPQLVL 226

Query: 348 AGSGP---------WEQ--RYKDFGHQVLVM--GSMSPAELRAFYNAIDIFVNPTLRPQG 394
            GSG          +E+   Y +    + V+    +S  E+ A   A  + +  ++R +G
Sbjct: 227 VGSGATDDPEGWIVYEEVLEYAEGDPDIHVLTLPPVSDLEVNALQRASTVVLQKSIR-EG 285

Query: 395 LDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAPNVESLHKTLEAAVSEGPMRLA 454
             LT+ EA+  GKPV+A     I   I  D E GF+    VE     +   + +  +R  
Sbjct: 286 FGLTVTEALWKGKPVIAGPVGGIPLQI-EDGETGFL-VDTVEEAAVRILYLLRDPELR-R 342

Query: 455 QRGEACRQYAASMFTANKMALAYERLF 481
           + G   R++    F   +    Y  L 
Sbjct: 343 KMGANAREHVRENFLITRHLKDYLYLI 369

The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. Length = 372

>gnl|CDD|99997 cd04946, GT1_AmsK_like, This family is most closely related to the GT1 family of glycosyltransferases

 Score = 42.3 bits (100), Expect = 4e-04
 Identities = 37/122 (30%), Positives = 56/122 (45%), Gaps = 16/122 (13%)

Query: 319 RLVKDKGHPLLHEAFSKLMVKYPDVYLIVA--GSGPWEQRYKDF--GH----QVLVMGSM 370
            LV  K   L+ +A + L    P + +     G GP E   K+          V   G +
Sbjct: 238 YLVPVKRVDLIIKALAALAKARPSIKIKWTHIGGGPLEDTLKELAESKPENISVNFTGEL 297

Query: 371 SPAELRAFY--NAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGT--IVVDDE 426
           S +E+   Y  N +D+FVN     +GL +++MEAM  G PV+A    ++ GT  IV +  
Sbjct: 298 SNSEVYKLYKENPVDVFVN-LSESEGLPVSIMEAMSFGIPVIA---TNVGGTPEIVDNGG 353

Query: 427 FG 428
            G
Sbjct: 354 NG 355

AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea. Length = 407

>gnl|CDD|107050 PHA01633, PHA01633, putative glycosyl transferase group 1

 Score = 40.0 bits (93), Expect = 0.002
 Identities = 44/181 (24%), Positives = 73/181 (40%), Gaps = 45/181 (24%)

Query: 266 MLRDVYQIPSERVHVILNGINENEYG--VDLSLGQSFRSRIGIPKNASLV---------- 313
           +L+DV  IP+ +     +  N  E G  VDL +      +I +     LV          
Sbjct: 90  LLQDVKFIPNSK----FSAENLQEVGLQVDLPVFHGINFKI-VENAEKLVPQLKQKLDKD 144

Query: 314 ------LGVAGRLVKDKGHPLLHEAFSKLMVKYPDV-----YLIVAGSGPWEQRYKDFG- 361
                  G+   L K K   L+ + F++L  KYPD+     + +++        +K F  
Sbjct: 145 FPDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVIS--------HKQFTQ 196

Query: 362 -------HQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRF 414
                  H V   G  S   + AFY A+D  + P+   +G  + ++E+M  G PV+    
Sbjct: 197 LEVPANVHFVAEFGHNSREYIFAFYGAMDFTIVPS-GTEGFGMPVLESMAMGTPVIHQLM 255

Query: 415 P 415
           P
Sbjct: 256 P 256

Length = 335

>gnl|CDD|234809 PRK00654, glgA, glycogen synthase; Provisional

 Score = 39.7 bits (94), Expect = 0.003
 Identities = 21/88 (23%), Positives = 40/88 (45%), Gaps = 19/88 (21%)

Query: 281 ILNGINENEY--GVDLSLGQSF---------------RSRIGIPKNASLVLGVAGRLVKD 323
           ILNGI+ + +    D  L  ++               + R G+P + + +  +  RL + 
Sbjct: 235 ILNGIDYDIWNPETDPLLAANYSADDLEGKAENKRALQERFGLPDDDAPLFAMVSRLTEQ 294

Query: 324 KGHPLLHEAFSKLMVKYPDVYLIVAGSG 351
           KG  L+ EA  +L+ +     L++ G+G
Sbjct: 295 KGLDLVLEALPELLEQ--GGQLVLLGTG 320

Length = 466

>gnl|CDD|182148 PRK09922, PRK09922, UDP-D-galactose:(glucosyl)lipopolysaccharide-1, 6-D-galactosyltransferase; Provisional

 Score = 38.9 bits (91), Expect = 0.004
 Identities = 43/197 (21%), Positives = 76/197 (38%), Gaps = 25/197 (12%)

Query: 256 HVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNAS-LVL 314
           H+AIS    E +     I ++R+ VI N +                  I  P+     V 
Sbjct: 137 HLAISSGIKEQMMA-RGISAQRISVIYNPVEIKT------------IIIPPPERDKPAVF 183

Query: 315 GVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDFGHQVLVMGSM---- 370
              GRL K +G   + E F  L     +  L + G G   ++ K +  ++ +   +    
Sbjct: 184 LYVGRL-KFEGQKNVKELFDGLSQTTGEWQLHIIGDGSDFEKCKAYSRELGIEQRIIWHG 242

Query: 371 ---SPAE-LRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDE 426
               P E ++     +   +  T + +G  +TL+EAM  G P ++S   S    I+    
Sbjct: 243 WQSQPWEVVQQKIKNVSALL-LTSKFEGFPMTLLEAMSYGIPCISSDCMSGPRDIIKPGL 301

Query: 427 FGFMFAP-NVESLHKTL 442
            G ++ P N++     L
Sbjct: 302 NGELYTPGNIDEFVGKL 318

Length = 359

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	493
PLN02871	465	UDP-sulfoquinovose:DAG sulfoquinovosyltransferase	100.0
PRK10307	412	putative glycosyl transferase; Provisional	100.0
cd03796	398	GT1_PIG-A_like This family is most closely related	100.0
TIGR03088	374	stp2 sugar transferase, PEP-CTERM/EpsH1 system ass	100.0
PRK00654	466	glgA glycogen synthase; Provisional	100.0
PLN02316	1036	synthase/transferase	100.0
PRK15427	406	colanic acid biosynthesis glycosyltransferase WcaL	100.0
PLN02939	977	transferase, transferring glycosyl groups	100.0
TIGR03449	405	mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino	100.0
TIGR02472	439	sucr_P_syn_N sucrose-phosphate synthase, putative,	100.0
PRK14099	485	glycogen synthase; Provisional	100.0
PRK15484	380	lipopolysaccharide 1,2-N-acetylglucosaminetransfer	100.0
TIGR02095	473	glgA glycogen/starch synthases, ADP-glucose type.	100.0
TIGR02149	388	glgA_Coryne glycogen synthase, Corynebacterium fam	100.0
cd04962	371	GT1_like_5 This family is most closely related to	100.0
PRK14098	489	glycogen synthase; Provisional	100.0
cd03805	392	GT1_ALG2_like This family is most closely related	100.0
cd03818	396	GT1_ExpC_like This family is most closely related	100.0
PRK15179	694	Vi polysaccharide biosynthesis protein TviE; Provi	100.0
cd03800	398	GT1_Sucrose_synthase This family is most closely r	100.0
TIGR02468	1050	sucrsPsyn_pln sucrose phosphate synthase/possible	100.0
PRK10125	405	putative glycosyl transferase; Provisional	100.0
cd04951	360	GT1_WbdM_like This family is most closely related	100.0
cd03819	355	GT1_WavL_like This family is most closely related	100.0
cd03825	365	GT1_wcfI_like This family is most closely related	100.0
cd03791	476	GT1_Glycogen_synthase_DULL1_like This family is mo	100.0
cd03814	364	GT1_like_2 This family is most closely related to	100.0
TIGR03087	397	stp1 sugar transferase, PEP-CTERM/EpsH1 system ass	100.0
cd05844	367	GT1_like_7 Glycosyltransferases catalyze the trans	100.0
cd03792	372	GT1_Trehalose_phosphorylase Trehalose phosphorylas	100.0
cd03802	335	GT1_AviGT4_like This family is most closely relate	100.0
cd03795	357	GT1_like_4 This family is most closely related to	100.0
TIGR02470	784	sucr_synth sucrose synthase. This model represents	100.0
PRK15490	578	Vi polysaccharide biosynthesis protein TviE; Provi	100.0
cd03807	365	GT1_WbnK_like This family is most closely related	100.0
cd03801	374	GT1_YqgM_like This family is most closely related	100.0
cd03817	374	GT1_UGDG_like This family is most closely related	100.0
cd03821	375	GT1_Bme6_like This family is most closely related	100.0
cd03799	355	GT1_amsK_like This is a family of GT1 glycosyltran	100.0
cd04955	363	GT1_like_6 This family is most closely related to	100.0
cd03823	359	GT1_ExpE7_like This family is most closely related	100.0
PRK09922	359	UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D	100.0
cd03816	415	GT1_ALG1_like This family is most closely related	100.0
cd03809	365	GT1_mtfB_like This family is most closely related	100.0
PLN02846	462	digalactosyldiacylglycerol synthase	100.0
cd03812	358	GT1_CapH_like This family is most closely related	100.0
cd03822	366	GT1_ecORF704_like This family is most closely rela	100.0
KOG1111	426	consensus N-acetylglucosaminyltransferase complex,	100.0
cd03798	377	GT1_wlbH_like This family is most closely related	100.0
cd03794	394	GT1_wbuB_like This family is most closely related	100.0
PLN02949	463	transferase, transferring glycosyl groups	100.0
cd03820	348	GT1_amsD_like This family is most closely related	100.0
cd03813	475	GT1_like_3 This family is most closely related to	100.0
cd03808	359	GT1_cap1E_like This family is most closely related	100.0
PLN00142	815	sucrose synthase	100.0
cd03806	419	GT1_ALG11_like This family is most closely related	100.0
cd03811	353	GT1_WabH_like This family is most closely related	100.0
cd03804	351	GT1_wbaZ_like This family is most closely related	100.0
cd04946	407	GT1_AmsK_like This family is most closely related	100.0
PHA01630	331	putative group 1 glycosyl transferase	100.0
TIGR02918	500	accessory Sec system glycosylation protein GtfA. M	100.0
PLN02275	371	transferase, transferring glycosyl groups	100.0
PHA01633	335	putative glycosyl transferase group 1	100.0
PLN02501	794	digalactosyldiacylglycerol synthase	100.0
cd04949	372	GT1_gtfA_like This family is most closely related	99.97
COG0297	487	GlgA Glycogen synthase [Carbohydrate transport and	99.97
PRK00726	357	murG undecaprenyldiphospho-muramoylpentapeptide be	99.97
PRK13609	380	diacylglycerol glucosyltransferase; Provisional	99.96
PRK05749	425	3-deoxy-D-manno-octulosonic-acid transferase; Revi	99.95
cd03785	350	GT1_MurG MurG is an N-acetylglucosaminyltransferas	99.95
PRK13608	391	diacylglycerol glucosyltransferase; Provisional	99.95
cd03788	460	GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a	99.95
PLN02605	382	monogalactosyldiacylglycerol synthase	99.95
cd04950	373	GT1_like_1 Glycosyltransferases catalyze the trans	99.95
TIGR01133	348	murG undecaprenyldiphospho-muramoylpentapeptide be	99.95
TIGR02400	456	trehalose_OtsA alpha,alpha-trehalose-phosphate syn	99.94
cd03793	590	GT1_Glycogen_synthase_GSY2_like Glycogen synthase,	99.94
KOG0853	495	consensus Glycosyltransferase [Cell wall/membrane/	99.93
PF00534	172	Glycos_transf_1: Glycosyl transferases group 1; In	99.93
PRK09814	333	beta-1,6-galactofuranosyltransferase; Provisional	99.92
PLN03063	797	alpha,alpha-trehalose-phosphate synthase (UDP-form	99.91
KOG1387	465	consensus Glycosyltransferase [Cell wall/membrane/	99.91
cd01635	229	Glycosyltransferase_GTB_type Glycosyltransferases	99.91
TIGR00236	365	wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras	99.9
PRK00025	380	lpxB lipid-A-disaccharide synthase; Reviewed	99.89
PRK14501	726	putative bifunctional trehalose-6-phosphate syntha	99.89
cd03786	363	GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th	99.88
COG0438	381	RfaG Glycosyltransferase [Cell envelope biogenesis	99.86
TIGR02398	487	gluc_glyc_Psyn glucosylglycerol-phosphate synthase	99.85
KOG2941	444	consensus Beta-1,4-mannosyltransferase [Posttransl	99.8
PF13692	135	Glyco_trans_1_4: Glycosyl transferases group 1; PD	99.79
PLN03064	934	alpha,alpha-trehalose-phosphate synthase (UDP-form	99.77
TIGR00215	385	lpxB lipid-A-disaccharide synthase. Lipid-A precur	99.75
TIGR03713	519	acc_sec_asp1 accessory Sec system protein Asp1. Th	99.74
COG3914	620	Spy Predicted O-linked N-acetylglucosamine transfe	99.72
TIGR02094	601	more_P_ylases alpha-glucan phosphorylases. This fa	99.69
COG0707	357	MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami	99.66
PF13439	177	Glyco_transf_4: Glycosyltransferase Family 4; PDB:	99.64
PF13844	468	Glyco_transf_41: Glycosyl transferase family 41; P	99.63
PRK12446	352	undecaprenyldiphospho-muramoylpentapeptide beta-N-	99.62
TIGR02919	438	accessory Sec system glycosyltransferase GtfB. Mem	99.55
PF05693	633	Glycogen_syn: Glycogen synthase; InterPro: IPR0086	99.5
PRK10117	474	trehalose-6-phosphate synthase; Provisional	99.48
PF13528	318	Glyco_trans_1_3: Glycosyl transferase family 1	99.46
TIGR03568	365	NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase,	99.46
PF00982	474	Glyco_transf_20: Glycosyltransferase family 20; In	99.46
PF13579	160	Glyco_trans_4_4: Glycosyl transferase 4-like domai	99.45
PF13524	92	Glyco_trans_1_2: Glycosyl transferases group 1	99.44
TIGR03492	396	conserved hypothetical protein. This protein famil	99.43
COG1519	419	KdtA 3-deoxy-D-manno-octulosonic-acid transferase	99.43
cd04299	778	GT1_Glycogen_Phosphorylase_like This family is mos	99.42
PLN02205	854	alpha,alpha-trehalose-phosphate synthase [UDP-form	99.36
COG0380	486	OtsA Trehalose-6-phosphate synthase [Carbohydrate	99.36
COG0381	383	WecB UDP-N-acetylglucosamine 2-epimerase [Cell env	99.34
cd03784	401	GT1_Gtf_like This family includes the Gtfs, a grou	99.34
COG0763	381	LpxB Lipid A disaccharide synthetase [Cell envelop	99.29
TIGR03590	279	PseG pseudaminic acid biosynthesis-associated prot	99.22
PF02684	373	LpxB: Lipid-A-disaccharide synthetase; InterPro: I	99.2
TIGR01426	392	MGT glycosyltransferase, MGT family. This model de	99.2
KOG4626	966	consensus O-linked N-acetylglucosamine transferase	99.19
TIGR00661	321	MJ1255 conserved hypothetical protein. This model	99.19
PF04007	335	DUF354: Protein of unknown function (DUF354); Inte	99.17
COG4641	373	Uncharacterized protein conserved in bacteria [Fun	99.17
PF02350	346	Epimerase_2: UDP-N-acetylglucosamine 2-epimerase;	99.14
COG1819	406	Glycosyl transferases, related to UDP-glucuronosyl	99.1
PHA03392	507	egt ecdysteroid UDP-glucosyltransferase; Provision	99.04
PF09314	185	DUF1972: Domain of unknown function (DUF1972); Int	99.01
PRK01021	608	lpxB lipid-A-disaccharide synthase; Reviewed	98.99
PF04464	369	Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate	98.84
PRK10017	426	colanic acid biosynthesis protein; Provisional	98.76
PLN02448	459	UDP-glycosyltransferase family protein	98.75
COG3980	318	spsG Spore coat polysaccharide biosynthesis protei	98.68
PF13477	139	Glyco_trans_4_2: Glycosyl transferase 4-like	98.64
PLN02208	442	glycosyltransferase family protein	98.54
COG4671	400	Predicted glycosyl transferase [General function p	98.54
COG1817	346	Uncharacterized protein conserved in archaea [Func	98.49
PRK02797	322	4-alpha-L-fucosyltransferase; Provisional	98.48
PLN03007	482	UDP-glucosyltransferase family protein	98.48
PF08323	245	Glyco_transf_5: Starch synthase catalytic domain;	98.47
PLN00414	446	glycosyltransferase family protein	98.44
PF07429	360	Glyco_transf_56: 4-alpha-L-fucosyltransferase glyc	98.44
PRK14089	347	ipid-A-disaccharide synthase; Provisional	98.4
PLN02410	451	UDP-glucoronosyl/UDP-glucosyl transferase family p	98.36
KOG3742	692	consensus Glycogen synthase [Carbohydrate transpor	98.35
PLN02210	456	UDP-glucosyl transferase	98.34
PLN02670	472	transferase, transferring glycosyl groups	98.32
PLN02764	453	glycosyltransferase family protein	98.28
PLN02562	448	UDP-glycosyltransferase	98.2
PLN02863	477	UDP-glucoronosyl/UDP-glucosyl transferase family p	98.17
PLN02554	481	UDP-glycosyltransferase family protein	98.11
PLN02173	449	UDP-glucosyl transferase family protein	97.92
TIGR02195	334	heptsyl_trn_II lipopolysaccharide heptosyltransfer	97.83
PF04101	167	Glyco_tran_28_C: Glycosyltransferase family 28 C-t	97.82
PLN00164	480	glucosyltransferase; Provisional	97.78
PLN02207	468	UDP-glycosyltransferase	97.7
PLN02992	481	coniferyl-alcohol glucosyltransferase	97.69
COG0859	334	RfaF ADP-heptose:LPS heptosyltransferase [Cell env	97.65
PRK10964	322	ADP-heptose:LPS heptosyl transferase I; Provisiona	97.65
PRK10916	348	ADP-heptose:LPS heptosyltransferase II; Provisiona	97.65
TIGR02193	319	heptsyl_trn_I lipopolysaccharide heptosyltransfera	97.53
COG3660	329	Predicted nucleoside-diphosphate-sugar epimerase [	97.5
PF11440	355	AGT: DNA alpha-glucosyltransferase; InterPro: IPR0	97.48
PF00201	500	UDPGT: UDP-glucoronosyl and UDP-glucosyl transfera	97.48
cd03789	279	GT1_LPS_heptosyltransferase Lipopolysaccharide hep	97.36
PRK10422	352	lipopolysaccharide core biosynthesis protein; Prov	97.31
PF12000	171	Glyco_trans_4_3: Gkycosyl transferase family 4 gro	97.28
PF06258	311	Mito_fiss_Elm1: Mitochondrial fission ELM1; InterP	97.28
COG2327	385	WcaK Polysaccharide pyruvyl transferase family pro	97.25
PLN03004	451	UDP-glycosyltransferase	97.21
PLN02555	480	limonoid glucosyltransferase	97.2
PLN02152	455	indole-3-acetate beta-glucosyltransferase	97.03
TIGR03609	298	S_layer_CsaB polysaccharide pyruvyl transferase Cs	97.03
COG0058	750	GlgP Glucan phosphorylase [Carbohydrate transport	97.02
PF11997	268	DUF3492: Domain of unknown function (DUF3492); Int	96.96
PF04230	286	PS_pyruv_trans: Polysaccharide pyruvyl transferase	96.94
PLN02167	475	UDP-glycosyltransferase family protein	96.83
KOG1050	732	consensus Trehalose-6-phosphate synthase component	96.82
TIGR02201	344	heptsyl_trn_III lipopolysaccharide heptosyltransfe	96.56
PLN03015	470	UDP-glucosyl transferase	96.39
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	96.33
PRK14986	815	glycogen phosphorylase; Provisional	96.22
PLN02534	491	UDP-glycosyltransferase	96.21
PF12038	168	DUF3524: Domain of unknown function (DUF3524); Int	96.12
COG1887	388	TagB Putative glycosyl/glycerophosphate transferas	96.01
PF15024	559	Glyco_transf_18: Glycosyltransferase family 18	95.76
PF01075	247	Glyco_transf_9: Glycosyltransferase family 9 (hept	95.61
cd04300	797	GT1_Glycogen_Phosphorylase This is a family of oli	95.54
PF06925	169	MGDG_synth: Monogalactosyldiacylglycerol (MGDG) sy	95.54
PRK14985	798	maltodextrin phosphorylase; Provisional	95.02
PF00343	713	Phosphorylase: Carbohydrate phosphorylase; InterPr	94.99
KOG1192	496	consensus UDP-glucuronosyl and UDP-glucosyl transf	94.79
PF03016	302	Exostosin: Exostosin family; InterPro: IPR004263 H	94.68
PF05159	269	Capsule_synth: Capsule polysaccharide biosynthesis	94.67
TIGR02093	794	P_ylase glycogen/starch/alpha-glucan phosphorylase	94.52
PF04413	186	Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid	92.67
PLN02166	436	dTDP-glucose 4,6-dehydratase	92.41
PF10933	364	DUF2827: Protein of unknown function (DUF2827); In	92.35
PF00862	550	Sucrose_synth: Sucrose synthase; InterPro: IPR0003	92.28
KOG3349	170	consensus Predicted glycosyltransferase [General f	91.57
COG4394	370	Uncharacterized protein conserved in bacteria [Fun	90.83
PF10093	374	DUF2331: Uncharacterized protein conserved in bact	90.71
COG5017	161	Uncharacterized conserved protein [Function unknow	90.34
PLN02206	442	UDP-glucuronate decarboxylase	89.99
PF02571	249	CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro:	89.35
PF03033	139	Glyco_transf_28: Glycosyltransferase family 28 N-t	88.2
PF01975	196	SurE: Survival protein SurE; InterPro: IPR002828 T	87.56
TIGR03837	371	efp_adjacent_2 conserved hypothetical protein, PP_	86.63
PF08660	170	Alg14: Oligosaccharide biosynthesis protein Alg14	86.37
PF10087	97	DUF2325: Uncharacterized protein conserved in bact	85.06
PF02951	119	GSH-S_N: Prokaryotic glutathione synthetase, N-ter	83.98
COG0496	252	SurE Predicted acid phosphatase [General function	83.81
PLN02778	298	3,5-epimerase/4-reductase	83.57
PRK02261	137	methylaspartate mutase subunit S; Provisional	81.39
COG2120	237	Uncharacterized proteins, LmbE homologs [Function	81.35
KOG1021	464	consensus Acetylglucosaminyltransferase EXT1/exost	81.23
COG2910	211	Putative NADH-flavin reductase [General function p	80.11

>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase

Probab=100.00  E-value=1.7e-44  Score=363.42  Aligned_cols=371  Identities=19%  Similarity=0.233  Sum_probs=274.9

Q ss_pred             CCCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCCC
Q 039338           80 SKFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEAD  159 (493)
Q Consensus        80 ~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (493)
                      .+++|||++++..+|+ ...||++.++.+++++|.++||+|++++.....  ....   ......  .............
T Consensus        55 ~~~~mrI~~~~~~~~~-~~~gG~~~~~~~l~~~L~~~G~eV~vlt~~~~~--~~~~---~g~~v~--~~~~~~~~~~~~~  126 (465)
T PLN02871         55 RSRPRRIALFVEPSPF-SYVSGYKNRFQNFIRYLREMGDEVLVVTTDEGV--PQEF---HGAKVI--GSWSFPCPFYQKV  126 (465)
T ss_pred             cCCCceEEEEECCcCC-cccccHHHHHHHHHHHHHHCCCeEEEEecCCCC--Cccc---cCceee--ccCCcCCccCCCc
Confidence            3778999999875443 478999999999999999999999999976543  1100   000000  0000000000000


Q ss_pred             ccccccchHHHHHHhcCCCCcEEEeCccchhHH------hhhccCcEEEEeccchhhhhhhhhhhhhhcCCCCccchHhH
Q 039338          160 KWRYSKGWEQFDEENQREPFDVVHSESVALPHW------LARNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFN  233 (493)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~DiI~~~~~~~~~~------~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (493)
                      ... ......+.+.+++.+||+||+|+.....+      ...++| +++++|+........     .      ..     
T Consensus       127 ~~~-~~~~~~l~~~i~~~kpDiIh~~~~~~~~~~~~~~ak~~~ip-~V~~~h~~~~~~~~~-----~------~~-----  188 (465)
T PLN02871        127 PLS-LALSPRIISEVARFKPDLIHASSPGIMVFGALFYAKLLCVP-LVMSYHTHVPVYIPR-----Y------TF-----  188 (465)
T ss_pred             eee-ccCCHHHHHHHHhCCCCEEEECCCchhHHHHHHHHHHhCCC-EEEEEecCchhhhhc-----c------cc-----
Confidence            011 11123566667788999999997532221      223557 899999753321100     0      00     


Q ss_pred             hHHHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCCCCCCcEE
Q 039338          234 KSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLV  313 (493)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~  313 (493)
                      ..+.+.+..  .++.+++.+|.++++|+...+.+.+.+..+.+++.+++||+|.+.|.+.... ...+.++.....+.++
T Consensus       189 ~~~~~~~~~--~~r~~~~~ad~ii~~S~~~~~~l~~~~~~~~~kv~vi~nGvd~~~f~p~~~~-~~~~~~~~~~~~~~~~  265 (465)
T PLN02871        189 SWLVKPMWD--IIRFLHRAADLTLVTSPALGKELEAAGVTAANRIRVWNKGVDSESFHPRFRS-EEMRARLSGGEPEKPL  265 (465)
T ss_pred             hhhHHHHHH--HHHHHHhhCCEEEECCHHHHHHHHHcCCCCcCeEEEeCCccCccccCCcccc-HHHHHHhcCCCCCCeE
Confidence            011111111  1235578899999999999999988544456899999999999888664332 3345555332223377


Q ss_pred             EEEecccccccChHHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhhhc--CcEEEecCCCHHHHHHHHHHcCEEEeCCCC
Q 039338          314 LGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDFG--HQVLVMGSMSPAELRAFYNAIDIFVNPTLR  391 (493)
Q Consensus       314 i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~l~--~~V~~~g~~~~~~~~~~~~~adv~v~ps~~  391 (493)
                      |+|+||+.+.||++.++++++++    ++++|+|+|+|+..+.++++.  .+|.|+|+++++++.++|+.||++|+||. 
T Consensus       266 i~~vGrl~~~K~~~~li~a~~~~----~~~~l~ivG~G~~~~~l~~~~~~~~V~f~G~v~~~ev~~~~~~aDv~V~pS~-  340 (465)
T PLN02871        266 IVYVGRLGAEKNLDFLKRVMERL----PGARLAFVGDGPYREELEKMFAGTPTVFTGMLQGDELSQAYASGDVFVMPSE-  340 (465)
T ss_pred             EEEeCCCchhhhHHHHHHHHHhC----CCcEEEEEeCChHHHHHHHHhccCCeEEeccCCHHHHHHHHHHCCEEEECCc-
Confidence            88999999999999999998876    689999999999888777764  68999999999999999999999999996 


Q ss_pred             CCCCChHHHHHHHcCCcEEecCCCCCccceeee---CcceEEECC-CHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHh
Q 039338          392 PQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVD---DEFGFMFAP-NVESLHKTLEAAVSEGPMRLAQRGEACRQYAASM  467 (493)
Q Consensus       392 ~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~---~~~G~~~~~-d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~  467 (493)
                      .|++|++++|||+||+|||+++.+|.. |++.+   +++|+++++ |+++++++|.+++++ ++.+++|++++++.++ +
T Consensus       341 ~E~~g~~vlEAmA~G~PVI~s~~gg~~-eiv~~~~~~~~G~lv~~~d~~~la~~i~~ll~~-~~~~~~~~~~a~~~~~-~  417 (465)
T PLN02871        341 SETLGFVVLEAMASGVPVVAARAGGIP-DIIPPDQEGKTGFLYTPGDVDDCVEKLETLLAD-PELRERMGAAAREEVE-K  417 (465)
T ss_pred             ccccCcHHHHHHHcCCCEEEcCCCCcH-hhhhcCCCCCceEEeCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHH-h
Confidence            599999999999999999999999998 88888   999999998 999999999999998 8999999999999986 4


Q ss_pred             cCHHHHHHHHHH-HHHHHhhc
Q 039338          468 FTANKMALAYER-LFLCIKNE  487 (493)
Q Consensus       468 fs~~~~~~~~~~-~~~~i~~~  487 (493)
                      |+|+.+++++.+ .|++++..
T Consensus       418 fsw~~~a~~l~~~~Y~~~~~~  438 (465)
T PLN02871        418 WDWRAATRKLRNEQYSAAIWF  438 (465)
T ss_pred             CCHHHHHHHHHHHHHHHHHHH
Confidence            999999999998 79988754

>PRK10307 putative glycosyl transferase; Provisional

Probab=100.00  E-value=1.8e-43  Score=351.95  Aligned_cols=379  Identities=18%  Similarity=0.202  Sum_probs=272.9

Q ss_pred             eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccC--CCCCCCCCCceEeecCC-CCc
Q 039338           84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQEN--DDGSNNKYPLLHFHEGE-ADK  160 (493)
Q Consensus        84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~  160 (493)
                      |||++++..|+|  ..||++.++.+|+++|.++||+|+|+|................  ..........+...... +..
T Consensus         1 mkIlii~~~~~P--~~~g~~~~~~~l~~~L~~~G~~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~r~~~~~~~~   78 (412)
T PRK10307          1 MKILVYGINYAP--ELTGIGKYTGEMAEWLAARGHEVRVITAPPYYPQWRVGEGYSAWRYRRESEGGVTVWRCPLYVPKQ   78 (412)
T ss_pred             CeEEEEecCCCC--CccchhhhHHHHHHHHHHCCCeEEEEecCCCCCCCCCCcccccccceeeecCCeEEEEccccCCCC
Confidence            899999998865  6799999999999999999999999997643200000000000  00000111122221111 110


Q ss_pred             -ccccc-------ch---HHHHHHhcCCCCcEEEeCccchh-----HHhhh--ccCcEEEEeccchhhhhhhhhhhhhhc
Q 039338          161 -WRYSK-------GW---EQFDEENQREPFDVVHSESVALP-----HWLAR--NVTNLAVSWHGIALESLQSGIFQDLTR  222 (493)
Q Consensus       161 -~~~~~-------~~---~~~~~~~~~~~~DiI~~~~~~~~-----~~~~~--~~p~~v~~~h~~~~~~~~~~~~~~~~~  222 (493)
                       ....+       .+   ..+.+.+ ..+||+||+|.+...     .++++  +.| +++++|+.+.......   ... 
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Div~~~~p~~~~~~~~~~~~~~~~~~-~v~~~~d~~~~~~~~~---~~~-  152 (412)
T PRK10307         79 PSGLKRLLHLGSFALSSFFPLLAQR-RWRPDRVIGVVPTLFCAPGARLLARLSGAR-TWLHIQDYEVDAAFGL---GLL-  152 (412)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhhcc-CCCCCEEEEeCCcHHHHHHHHHHHHhhCCC-EEEEeccCCHHHHHHh---CCc-
Confidence             00000       01   1112222 368999999875321     12222  346 8888888654322110   000 


Q ss_pred             CCCCccchHhHhHHHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCccc-chhhh
Q 039338          223 KPLEPMSLAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSL-GQSFR  301 (493)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~-~~~~r  301 (493)
                       .     ......+...     .+...++++|.++++|+.+.+.+.+ ++++..++.+||||+|.+.+.+.... ...++
T Consensus       153 -~-----~~~~~~~~~~-----~~~~~~~~ad~ii~~S~~~~~~~~~-~~~~~~~i~vi~ngvd~~~~~~~~~~~~~~~~  220 (412)
T PRK10307        153 -K-----GGKVARLATA-----FERSLLRRFDNVSTISRSMMNKARE-KGVAAEKVIFFPNWSEVARFQPVADADVDALR  220 (412)
T ss_pred             -c-----CcHHHHHHHH-----HHHHHHhhCCEEEecCHHHHHHHHH-cCCCcccEEEECCCcCHhhcCCCCccchHHHH
Confidence             0     0000111111     2346688999999999999999987 57778899999999999887654322 34578


Q ss_pred             hhhCCCCCCcEEEEEecccccccChHHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhhh----c-CcEEEecCCCHHHHH
Q 039338          302 SRIGIPKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDF----G-HQVLVMGSMSPAELR  376 (493)
Q Consensus       302 ~~~~i~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~l----~-~~V~~~g~~~~~~~~  376 (493)
                      +++++++++ ++|+|+|++.+.||++.+++|++.+.+ .++++|+|+|+|+..+.++++    + ++|.|+|+++++++.
T Consensus       221 ~~~~~~~~~-~~i~~~G~l~~~kg~~~li~a~~~l~~-~~~~~l~ivG~g~~~~~l~~~~~~~~l~~v~f~G~~~~~~~~  298 (412)
T PRK10307        221 AQLGLPDGK-KIVLYSGNIGEKQGLELVIDAARRLRD-RPDLIFVICGQGGGKARLEKMAQCRGLPNVHFLPLQPYDRLP  298 (412)
T ss_pred             HHcCCCCCC-EEEEEcCccccccCHHHHHHHHHHhcc-CCCeEEEEECCChhHHHHHHHHHHcCCCceEEeCCCCHHHHH
Confidence            888988766 788899999999999999999998854 478999999999877766543    2 579999999999999


Q ss_pred             HHHHHcCEEEeCCCCCCC----CChHHHHHHHcCCcEEecCCCCCc-cceeeeCcceEEECC-CHHHHHHHHHHHHHcCc
Q 039338          377 AFYNAIDIFVNPTLRPQG----LDLTLMEAMMSGKPVMASRFPSIK-GTIVVDDEFGFMFAP-NVESLHKTLEAAVSEGP  450 (493)
Q Consensus       377 ~~~~~adv~v~ps~~~eg----~~~~~~EAm~~G~PvI~s~~~~~~-~e~v~~~~~G~~~~~-d~~~l~~~i~~ll~~~~  450 (493)
                      ++|++||++++|+.. |+    +|.+++|||+||+|||+++.+|.. .+++.  ++|+++++ |+++++++|.+++++ +
T Consensus       299 ~~~~~aDi~v~ps~~-e~~~~~~p~kl~eama~G~PVi~s~~~g~~~~~~i~--~~G~~~~~~d~~~la~~i~~l~~~-~  374 (412)
T PRK10307        299 ALLKMADCHLLPQKA-GAADLVLPSKLTNMLASGRNVVATAEPGTELGQLVE--GIGVCVEPESVEALVAAIAALARQ-A  374 (412)
T ss_pred             HHHHhcCEeEEeecc-CcccccCcHHHHHHHHcCCCEEEEeCCCchHHHHHh--CCcEEeCCCCHHHHHHHHHHHHhC-H
Confidence            999999999999964 76    688899999999999999987631 26665  69999998 999999999999998 8


Q ss_pred             HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhcc
Q 039338          451 MRLAQRGEACRQYAASMFTANKMALAYERLFLCIKNET  488 (493)
Q Consensus       451 ~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~i~~~~  488 (493)
                      +.+++|++++++++++.|||+.+++++.++|++++.++
T Consensus       375 ~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~~~  412 (412)
T PRK10307        375 LLRPKLGTVAREYAERTLDKENVLRQFIADIRGLVAER  412 (412)
T ss_pred             HHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhcCC
Confidence            99999999999999999999999999999999988763

>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=4.2e-43  Score=347.25  Aligned_cols=353  Identities=22%  Similarity=0.254  Sum_probs=265.7

Q ss_pred             EEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCC-----C
Q 039338           85 KIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEA-----D  159 (493)
Q Consensus        85 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~  159 (493)
                      ||++++..|+|  ..||.++++..++++|+++||+|+|++.....  ....+.      .. ....++......     .
T Consensus         1 kI~~v~~~~~p--~~GG~e~~~~~la~~L~~~G~~V~v~~~~~~~--~~~~~~------~~-~~i~v~~~p~~~~~~~~~   69 (398)
T cd03796           1 RICMVSDFFYP--NLGGVETHIYQLSQCLIKRGHKVVVITHAYGN--RVGIRY------LT-NGLKVYYLPFVVFYNQST   69 (398)
T ss_pred             CeeEEeecccc--ccccHHHHHHHHHHHHHHcCCeeEEEeccCCc--CCCccc------cc-CceeEEEecceeccCCcc
Confidence            69999998865  78999999999999999999999999976433  111111      01 111122211110     1


Q ss_pred             ccccccchHHHHHHhcCCCCcEEEeCccchh----HHh-h--hccCcEEEEeccchhhhhhhhhhhhhhcCCCCccchHh
Q 039338          160 KWRYSKGWEQFDEENQREPFDVVHSESVALP----HWL-A--RNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAF  232 (493)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~DiI~~~~~~~~----~~~-~--~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (493)
                      ..........+.+.+.+.+||+||+|+....    .++ .  .++| ++.+.|+........                  
T Consensus        70 ~~~~~~~~~~l~~~~~~~~~DiIh~~~~~~~~~~~~~~~~~~~~~~-~v~t~h~~~~~~~~~------------------  130 (398)
T cd03796          70 LPTFFGTFPLLRNILIRERITIVHGHQAFSALAHEALLHARTMGLK-TVFTDHSLFGFADAS------------------  130 (398)
T ss_pred             ccchhhhHHHHHHHHHhcCCCEEEECCCCchHHHHHHHHhhhcCCc-EEEEecccccccchh------------------
Confidence            1112234456666667889999999975311    111 2  2456 899999853210000                  


Q ss_pred             HhHHHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCCCCCCcE
Q 039338          233 NKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASL  312 (493)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~  312 (493)
                       ......+     ....++++|.++++|+...+.+....+++.+++.+||||+|.+.|.+....         .+ ++++
T Consensus       131 -~~~~~~~-----~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~k~~vi~ngvd~~~f~~~~~~---------~~-~~~~  194 (398)
T cd03796         131 -SIHTNKL-----LRFSLADVDHVICVSHTSKENTVLRASLDPERVSVIPNAVDSSDFTPDPSK---------RD-NDKI  194 (398)
T ss_pred             -hHHhhHH-----HHHhhccCCEEEEecHhHhhHHHHHhCCChhhEEEEcCccCHHHcCCCccc---------CC-CCce
Confidence             0011111     124578999999999999987655567778899999999998877654321         12 3348


Q ss_pred             EEEEecccccccChHHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhhh------cCcEEEecCCCHHHHHHHHHHcCEEE
Q 039338          313 VLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDF------GHQVLVMGSMSPAELRAFYNAIDIFV  386 (493)
Q Consensus       313 ~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~l------~~~V~~~g~~~~~~~~~~~~~adv~v  386 (493)
                      +++++||+.+.||++.+++|++.+.++.++++|+++|+|+..+.++++      .++|.|+|+++++++.++|+.||+++
T Consensus       195 ~i~~~grl~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~l~~~~~~~~l~~~v~~~G~~~~~~~~~~l~~ad~~v  274 (398)
T cd03796         195 TIVVISRLVYRKGIDLLVGIIPEICKKHPNVRFIIGGDGPKRILLEEMREKYNLQDRVELLGAVPHERVRDVLVQGHIFL  274 (398)
T ss_pred             EEEEEeccchhcCHHHHHHHHHHHHhhCCCEEEEEEeCCchHHHHHHHHHHhCCCCeEEEeCCCCHHHHHHHHHhCCEEE
Confidence            899999999999999999999999888899999999999866655543      37799999999999999999999999


Q ss_pred             eCCCCCCCCChHHHHHHHcCCcEEecCCCCCccceeeeCcceEEECCCHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHH
Q 039338          387 NPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAPNVESLHKTLEAAVSEGPMRLAQRGEACRQYAAS  466 (493)
Q Consensus       387 ~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~  466 (493)
                      +||. .|++|++++|||+||+|||+++.|+.+ |++.++ .++++++|+++++++|.+++++ ......+++++++.+++
T Consensus       275 ~pS~-~E~~g~~~~EAma~G~PVI~s~~gg~~-e~i~~~-~~~~~~~~~~~l~~~l~~~l~~-~~~~~~~~~~~~~~~~~  350 (398)
T cd03796         275 NTSL-TEAFCIAIVEAASCGLLVVSTRVGGIP-EVLPPD-MILLAEPDVESIVRKLEEAISI-LRTGKHDPWSFHNRVKK  350 (398)
T ss_pred             eCCh-hhccCHHHHHHHHcCCCEEECCCCCch-hheeCC-ceeecCCCHHHHHHHHHHHHhC-hhhhhhHHHHHHHHHHh
Confidence            9996 599999999999999999999999998 887765 4555555999999999999998 55555788999999999


Q ss_pred             hcCHHHHHHHHHHHHHHHhhc
Q 039338          467 MFTANKMALAYERLFLCIKNE  487 (493)
Q Consensus       467 ~fs~~~~~~~~~~~~~~i~~~  487 (493)
                      +|||+++++++.++|++++..
T Consensus       351 ~fs~~~~~~~~~~~y~~l~~~  371 (398)
T cd03796         351 MYSWEDVAKRTEKVYDRILQT  371 (398)
T ss_pred             hCCHHHHHHHHHHHHHHHhcC
Confidence            999999999999999998764

Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.

>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated

Probab=100.00  E-value=1e-42  Score=342.50  Aligned_cols=358  Identities=23%  Similarity=0.301  Sum_probs=267.0

Q ss_pred             eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCCCcccc
Q 039338           84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEADKWRY  163 (493)
Q Consensus        84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (493)
                      .||+++...+    ..||+++++.+|+++|.+.||++++++.....  . ....      .......+......  ....
T Consensus         2 ~~il~ii~~~----~~GG~e~~~~~l~~~l~~~~~~~~v~~~~~~~--~-~~~~------~~~~~i~~~~~~~~--~~~~   66 (374)
T TIGR03088         2 PLIVHVVYRF----DVGGLENGLVNLINHLPADRYRHAVVALTEVS--A-FRKR------IQRPDVAFYALHKQ--PGKD   66 (374)
T ss_pred             ceEEEEeCCC----CCCcHHHHHHHHHhhccccccceEEEEcCCCC--h-hHHH------HHhcCceEEEeCCC--CCCC
Confidence            5799999875    77999999999999999999999988854322  1 1111      01111122222211  1122


Q ss_pred             ccchHHHHHHhcCCCCcEEEeCccchh--HHhh--hccCcEEEEeccchhhhhhhhhhhhhhcCCCCccchHhHhHHHHH
Q 039338          164 SKGWEQFDEENQREPFDVVHSESVALP--HWLA--RNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQGV  239 (493)
Q Consensus       164 ~~~~~~~~~~~~~~~~DiI~~~~~~~~--~~~~--~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (493)
                      ...+..+.+.+++.+||+||+|+....  .+.+  .+.|..+.+.|+......+.               .   ......
T Consensus        67 ~~~~~~l~~~l~~~~~Divh~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~---------------~---~~~~~~  128 (374)
T TIGR03088        67 VAVYPQLYRLLRQLRPDIVHTRNLAALEAQLPAALAGVPARIHGEHGRDVFDLDG---------------S---NWKYRW  128 (374)
T ss_pred             hHHHHHHHHHHHHhCCCEEEEcchhHHHHHHHHHhcCCCeEEEeecCcccccchh---------------h---HHHHHH
Confidence            334566777777889999999975321  1111  23343344555432110000               0   011111


Q ss_pred             HHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCCCCCCcEEEEEecc
Q 039338          240 MLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVAGR  319 (493)
Q Consensus       240 ~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Gr  319 (493)
                      +.+     ...+.+|.++++|+...+.+.+.++++..++.+|+||+|.+.|.+........+++...+++ +++++++||
T Consensus       129 ~~~-----~~~~~~~~~i~vs~~~~~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~vGr  202 (374)
T TIGR03088       129 LRR-----LYRPLIHHYVAVSRDLEDWLRGPVKVPPAKIHQIYNGVDTERFHPSRGDRSPILPPDFFADE-SVVVGTVGR  202 (374)
T ss_pred             HHH-----HHHhcCCeEEEeCHHHHHHHHHhcCCChhhEEEeccCccccccCCCccchhhhhHhhcCCCC-CeEEEEEec
Confidence            111     23456899999999999999988888888999999999998876654333333333333434 488999999


Q ss_pred             cccccChHHHHHHHHHHHhhCC----CeEEEEEeCCCcHHHHhhh------cCcEEEecCCCHHHHHHHHHHcCEEEeCC
Q 039338          320 LVKDKGHPLLHEAFSKLMVKYP----DVYLIVAGSGPWEQRYKDF------GHQVLVMGSMSPAELRAFYNAIDIFVNPT  389 (493)
Q Consensus       320 ~~~~Kg~~~ll~a~~~l~~~~~----~~~l~i~G~g~~~~~~~~l------~~~V~~~g~~~~~~~~~~~~~adv~v~ps  389 (493)
                      +.+.||++.+++|+..+.++.+    +++|+++|+|+..+.++++      .+++.|.|..  +++.++|++||++|+||
T Consensus       203 l~~~Kg~~~li~a~~~l~~~~~~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~v~~~g~~--~~~~~~~~~adi~v~pS  280 (374)
T TIGR03088       203 LQAVKDQPTLVRAFALLVRQLPEGAERLRLVIVGDGPARGACEQMVRAAGLAHLVWLPGER--DDVPALMQALDLFVLPS  280 (374)
T ss_pred             CCcccCHHHHHHHHHHHHHhCcccccceEEEEecCCchHHHHHHHHHHcCCcceEEEcCCc--CCHHHHHHhcCEEEecc
Confidence            9999999999999999987654    7899999999876655543      2678899975  79999999999999999


Q ss_pred             CCCCCCChHHHHHHHcCCcEEecCCCCCccceeeeCcceEEECC-CHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHhc
Q 039338          390 LRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAP-NVESLHKTLEAAVSEGPMRLAQRGEACRQYAASMF  468 (493)
Q Consensus       390 ~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~~-d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~f  468 (493)
                      . .||+|++++|||+||+|||+++.|+.+ |++.++.+|+++++ |+++++++|.+++++ ++.+.++++++++++.++|
T Consensus       281 ~-~Eg~~~~~lEAma~G~Pvv~s~~~g~~-e~i~~~~~g~~~~~~d~~~la~~i~~l~~~-~~~~~~~~~~a~~~~~~~f  357 (374)
T TIGR03088       281 L-AEGISNTILEAMASGLPVIATAVGGNP-ELVQHGVTGALVPPGDAVALARALQPYVSD-PAARRAHGAAGRARAEQQF  357 (374)
T ss_pred             c-cccCchHHHHHHHcCCCEEEcCCCCcH-HHhcCCCceEEeCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhC
Confidence            6 599999999999999999999999998 89999999999998 999999999999998 8899999999999999899


Q ss_pred             CHHHHHHHHHHHHHHHh
Q 039338          469 TANKMALAYERLFLCIK  485 (493)
Q Consensus       469 s~~~~~~~~~~~~~~i~  485 (493)
                      ||+.++++++++|++++
T Consensus       358 s~~~~~~~~~~~y~~~~  374 (374)
T TIGR03088       358 SINAMVAAYAGLYDQLL  374 (374)
T ss_pred             CHHHHHHHHHHHHHHhC
Confidence            99999999999999863

Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.

>PRK00654 glgA glycogen synthase; Provisional

Probab=100.00  E-value=6.1e-43  Score=351.34  Aligned_cols=389  Identities=21%  Similarity=0.264  Sum_probs=265.3

Q ss_pred             eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCC---------CCCCCCceEee
Q 039338           84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDG---------SNNKYPLLHFH  154 (493)
Q Consensus        84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~  154 (493)
                      |||++|+.++.|....||.+.++..|+++|+++||+|+|+++....+.............         ....+..+++.
T Consensus         1 m~i~~vs~e~~P~~k~GGl~~~v~~L~~~L~~~G~~V~v~~p~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~v   80 (466)
T PRK00654          1 MKILFVASECAPLIKTGGLGDVVGALPKALAALGHDVRVLLPGYPAIREKLRDAQVVGRLDLFTVLFGHLEGDGVPVYLI   80 (466)
T ss_pred             CeEEEEEcccccCcccCcHHHHHHHHHHHHHHCCCcEEEEecCCcchhhhhcCceEEEEeeeEEEEEEeEEcCCceEEEE
Confidence            899999998766567999999999999999999999999998765422111000000000         01122223322


Q ss_pred             cCC-----CCcccccc-------chHHHHHHhc--CCCCcEEEeCccc--h-hHHhhh-------ccCcEEEEeccchhh
Q 039338          155 EGE-----ADKWRYSK-------GWEQFDEENQ--REPFDVVHSESVA--L-PHWLAR-------NVTNLAVSWHGIALE  210 (493)
Q Consensus       155 ~~~-----~~~~~~~~-------~~~~~~~~~~--~~~~DiI~~~~~~--~-~~~~~~-------~~p~~v~~~h~~~~~  210 (493)
                      ...     ...+.+..       ......+.++  ..+|||||+|.+.  + +.++..       ++| ++.|+|+..+.
T Consensus        81 ~~~~~~~~~~~y~~~d~~~r~~~f~~~~~~~~~~~~~~pDiiH~h~w~~~~~~~~l~~~~~~~~~~~~-~v~TiH~~~~~  159 (466)
T PRK00654         81 DAPHLFDRPSGYGYPDNGERFAFFSWAAAEFAEGLDPRPDIVHAHDWHTGLIPALLKEKYWRGYPDIK-TVFTIHNLAYQ  159 (466)
T ss_pred             eCHHHcCCCCCCCCcChHHHHHHHHHHHHHHHHhcCCCCceEEECCcHHHHHHHHHHHhhhccCCCCC-EEEEcCCCcCC
Confidence            211     01111110       0111222222  3589999999752  2 222321       356 99999997543


Q ss_pred             hhhh-hhhhhhhcCCCCccchHhHhHHHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHH---------hCCCCCcEEE
Q 039338          211 SLQS-GIFQDLTRKPLEPMSLAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDV---------YQIPSERVHV  280 (493)
Q Consensus       211 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~---------~~~~~~~v~v  280 (493)
                      .... +..... ..+.....   ...+. .....-..+..+..+|.++++|+.+++.+.+.         ++.+.+++.+
T Consensus       160 g~~~~~~~~~~-~~~~~~~~---~~~~~-~~~~~~~~~~~~~~ad~vitvS~~~~~ei~~~~~~~gl~~~~~~~~~ki~v  234 (466)
T PRK00654        160 GLFPAEILGEL-GLPAEAFH---LEGLE-FYGQISFLKAGLYYADRVTTVSPTYAREITTPEFGYGLEGLLRARSGKLSG  234 (466)
T ss_pred             CcCCHHHHHHc-CCChHHcC---chhhh-cCCcccHHHHHHHhcCcCeeeCHHHHHHhccccCCcChHHHHHhcccCceE
Confidence            2111 011110 00000000   00000 00000012245678999999999999888652         1235678999


Q ss_pred             ecCCccCCCccCCcc-----------------cchhhhhhhCCCCCCcEEEEEecccccccChHHHHHHHHHHHhhCCCe
Q 039338          281 ILNGINENEYGVDLS-----------------LGQSFRSRIGIPKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDV  343 (493)
Q Consensus       281 i~ngvd~~~~~~~~~-----------------~~~~~r~~~~i~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~  343 (493)
                      |+||+|.+.|.+..+                 .+..+++++|+++++.++|+++||+.++||++.+++|+.++.++  ++
T Consensus       235 I~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~i~~vGRl~~~KG~~~li~a~~~l~~~--~~  312 (466)
T PRK00654        235 ILNGIDYDIWNPETDPLLAANYSADDLEGKAENKRALQERFGLPDDDAPLFAMVSRLTEQKGLDLVLEALPELLEQ--GG  312 (466)
T ss_pred             ecCCCCccccCCccCcccccccChhhhhchHHHHHHHHHHhCCCCCCCcEEEEeeccccccChHHHHHHHHHHHhc--CC
Confidence            999999998877532                 13467889999865557889999999999999999999999764  78


Q ss_pred             EEEEEeCCCc--HHHHhh----hcCcEEEecCCCHHHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCC
Q 039338          344 YLIVAGSGPW--EQRYKD----FGHQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSI  417 (493)
Q Consensus       344 ~l~i~G~g~~--~~~~~~----l~~~V~~~g~~~~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~  417 (493)
                      +|+|+|+|+.  .+.+++    ++.++.+....+.+.+..+|++||++|+||.+ |+||++++|||+||+|||+++.||+
T Consensus       313 ~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~g~~~~~~~~~~~~aDv~v~PS~~-E~~gl~~lEAma~G~p~V~~~~gG~  391 (466)
T PRK00654        313 QLVLLGTGDPELEEAFRALAARYPGKVGVQIGYDEALAHRIYAGADMFLMPSRF-EPCGLTQLYALRYGTLPIVRRTGGL  391 (466)
T ss_pred             EEEEEecCcHHHHHHHHHHHHHCCCcEEEEEeCCHHHHHHHHhhCCEEEeCCCC-CCchHHHHHHHHCCCCEEEeCCCCc
Confidence            9999998853  334433    34566654334666778999999999999975 9999999999999999999999999


Q ss_pred             ccceeeeC------cceEEECC-CHHHHHHHHHHHHH---cCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhh
Q 039338          418 KGTIVVDD------EFGFMFAP-NVESLHKTLEAAVS---EGPMRLAQRGEACRQYAASMFTANKMALAYERLFLCIKN  486 (493)
Q Consensus       418 ~~e~v~~~------~~G~~~~~-d~~~l~~~i~~ll~---~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~i~~  486 (493)
                      + |++.++      ++|+++++ |+++|+++|.++++   + ++.+.++++++.   ++.|||++++++|+++|+++++
T Consensus       392 ~-e~v~~~~~~~~~~~G~lv~~~d~~~la~~i~~~l~~~~~-~~~~~~~~~~~~---~~~fsw~~~a~~~~~lY~~~~~  465 (466)
T PRK00654        392 A-DTVIDYNPEDGEATGFVFDDFNAEDLLRALRRALELYRQ-PPLWRALQRQAM---AQDFSWDKSAEEYLELYRRLLG  465 (466)
T ss_pred             c-ceeecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHhcC-HHHHHHHHHHHh---ccCCChHHHHHHHHHHHHHHhh
Confidence            8 888887      89999999 99999999999887   4 566777777764   3579999999999999999875

>PLN02316 synthase/transferase

Probab=100.00  E-value=2.7e-42  Score=358.71  Aligned_cols=368  Identities=16%  Similarity=0.193  Sum_probs=269.1

Q ss_pred             CCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccC---CC---------CCCCCC
Q 039338           81 KFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQEN---DD---------GSNNKY  148 (493)
Q Consensus        81 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~---~~---------~~~~~~  148 (493)
                      ..+|||++|+.+++|....||.+.++..|.++|++.||+|.|+++....+..........   +.         .....+
T Consensus       585 ~~pM~Il~VSsE~~P~aKvGGLgDVV~sLp~ALa~~Gh~V~VitP~Y~~i~~~~~~~~~~~~~~~~~~~~~~v~~~~~~G  664 (1036)
T PLN02316        585 EPPMHIVHIAVEMAPIAKVGGLGDVVTSLSRAVQDLNHNVDIILPKYDCLNLSHVKDLHYQRSYSWGGTEIKVWFGKVEG  664 (1036)
T ss_pred             CCCcEEEEEEcccCCCCCcCcHHHHHHHHHHHHHHcCCEEEEEecCCcccchhhcccceEEEEeccCCEEEEEEEEEECC
Confidence            446999999999987778999999999999999999999999999876522111111000   00         000011


Q ss_pred             CceEeecCCCCcc------c-------cccchHHHHHHhc--CCCCcEEEeCcc--chhH-Hhhh--------ccCcEEE
Q 039338          149 PLLHFHEGEADKW------R-------YSKGWEQFDEENQ--REPFDVVHSESV--ALPH-WLAR--------NVTNLAV  202 (493)
Q Consensus       149 ~~~~~~~~~~~~~------~-------~~~~~~~~~~~~~--~~~~DiI~~~~~--~~~~-~~~~--------~~p~~v~  202 (493)
                      ..++++......+      .       +........+.+.  ..+|||||+|++  ++.+ ++..        .+| +|.
T Consensus       665 V~vyfl~~~~~~F~r~~~Yg~~Dd~~RF~~F~~Aale~l~~~~~~PDIIHaHDW~talva~llk~~~~~~~~~~~p-~V~  743 (1036)
T PLN02316        665 LSVYFLEPQNGMFWAGCVYGCRNDGERFGFFCHAALEFLLQSGFHPDIIHCHDWSSAPVAWLFKDHYAHYGLSKAR-VVF  743 (1036)
T ss_pred             cEEEEEeccccccCCCCCCCchhHHHHHHHHHHHHHHHHHhcCCCCCEEEECCChHHHHHHHHHHhhhhhccCCCC-EEE
Confidence            2222222211111      0       0011111222221  468999999975  2222 2221        245 999


Q ss_pred             EeccchhhhhhhhhhhhhhcCCCCccchHhHhHHHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCC--CCcEEE
Q 039338          203 SWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIP--SERVHV  280 (493)
Q Consensus       203 ~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~--~~~v~v  280 (493)
                      ++|+..+..                      ..    +      ...+..+|.|+++|+.+++.+...+.+.  ..++.+
T Consensus       744 TiHnl~~~~----------------------n~----l------k~~l~~AD~ViTVS~tya~EI~~~~~l~~~~~Kl~v  791 (1036)
T PLN02316        744 TIHNLEFGA----------------------NH----I------GKAMAYADKATTVSPTYSREVSGNSAIAPHLYKFHG  791 (1036)
T ss_pred             EeCCcccch----------------------hH----H------HHHHHHCCEEEeCCHHHHHHHHhccCcccccCCEEE
Confidence            999853210                      00    0      1345689999999999999988754443  479999


Q ss_pred             ecCCccCCCccCCcc------------------cchhhhhhhCCCCCCcEEEEEecccccccChHHHHHHHHHHHhhCCC
Q 039338          281 ILNGINENEYGVDLS------------------LGQSFRSRIGIPKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPD  342 (493)
Q Consensus       281 i~ngvd~~~~~~~~~------------------~~~~~r~~~~i~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~  342 (493)
                      |+||||.+.|.|..+                  .+..+++++|++..+.++|+++||+.++||++.|++|+..+.+  .+
T Consensus       792 I~NGID~~~w~P~tD~~lp~~y~~~~~~~gK~~~k~~Lr~~lGL~~~d~plVg~VGRL~~qKGvdlLi~Al~~ll~--~~  869 (1036)
T PLN02316        792 ILNGIDPDIWDPYNDNFIPVPYTSENVVEGKRAAKEALQQRLGLKQADLPLVGIITRLTHQKGIHLIKHAIWRTLE--RN  869 (1036)
T ss_pred             EECCccccccCCcccccccccCCchhhhhhhhhhHHHHHHHhCCCcccCeEEEEEeccccccCHHHHHHHHHHHhh--cC
Confidence            999999988766422                  1345788999985444789999999999999999999999876  37


Q ss_pred             eEEEEEeCCCcHH---HHhh----h----cCcEEEecCCCHHHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcCCcEEe
Q 039338          343 VYLIVAGSGPWEQ---RYKD----F----GHQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMA  411 (493)
Q Consensus       343 ~~l~i~G~g~~~~---~~~~----l----~~~V~~~g~~~~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~  411 (493)
                      ++|+|+|+|+...   .+++    +    .++|.|.|..+......+|+.||++|+||. .|+||++.+|||+||+|+|+
T Consensus       870 ~qlVIvG~Gpd~~~e~~l~~La~~Lg~~~~~rV~f~g~~de~lah~iyaaADiflmPS~-~EP~GLvqLEAMa~GtppVv  948 (1036)
T PLN02316        870 GQVVLLGSAPDPRIQNDFVNLANQLHSSHHDRARLCLTYDEPLSHLIYAGADFILVPSI-FEPCGLTQLTAMRYGSIPVV  948 (1036)
T ss_pred             cEEEEEeCCCCHHHHHHHHHHHHHhCccCCCeEEEEecCCHHHHHHHHHhCcEEEeCCc-ccCccHHHHHHHHcCCCeEE
Confidence            8999999987532   2222    2    257999888865445689999999999996 59999999999999999999


Q ss_pred             cCCCCCccceeeeC-------------cceEEECC-CHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHhcCHHHHHHHH
Q 039338          412 SRFPSIKGTIVVDD-------------EFGFMFAP-NVESLHKTLEAAVSEGPMRLAQRGEACRQYAASMFTANKMALAY  477 (493)
Q Consensus       412 s~~~~~~~e~v~~~-------------~~G~~~~~-d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~  477 (493)
                      +++||++ |+|.++             .+|++|++ |+++|+.+|.+++++..+....+++.+++.+.+.|||+.++++|
T Consensus       949 s~vGGL~-DtV~d~d~~~~~~~~~g~~~tGflf~~~d~~aLa~AL~raL~~~~~~~~~~~~~~r~~m~~dFSW~~~A~~Y 1027 (1036)
T PLN02316        949 RKTGGLF-DTVFDVDHDKERAQAQGLEPNGFSFDGADAAGVDYALNRAISAWYDGRDWFNSLCKRVMEQDWSWNRPALDY 1027 (1036)
T ss_pred             EcCCCcH-hhccccccccccccccccCCceEEeCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhhCCHHHHHHHH
Confidence            9999999 777763             68999999 99999999999998755666778899999999999999999999


Q ss_pred             HHHHHHHh
Q 039338          478 ERLFLCIK  485 (493)
Q Consensus       478 ~~~~~~i~  485 (493)
                      +++|++++
T Consensus      1028 ~~LY~~a~ 1035 (1036)
T PLN02316       1028 MELYHSAR 1035 (1036)
T ss_pred             HHHHHHHh
Confidence            99999875

>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional

Probab=100.00  E-value=1.9e-42  Score=340.92  Aligned_cols=357  Identities=20%  Similarity=0.270  Sum_probs=263.5

Q ss_pred             eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCcc-------ccCCCCCCCCCCc-----e
Q 039338           84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISH-------QENDDGSNNKYPL-----L  151 (493)
Q Consensus        84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~-----~  151 (493)
                      |||+++...||.     -.++++.+-+.+|.++||+|++++.....  ......       ...+.+.......     .
T Consensus         1 m~ia~~~~~~P~-----~setFi~~ei~~l~~~G~~v~~~s~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   73 (406)
T PRK15427          1 MKVGFFLLKFPL-----SSETFVLNQITAFIDMGFEVEIVALQKGD--TQNTHAAWTKYNLAAKTRWLQDEPQGKVAKLR   73 (406)
T ss_pred             CeEEEEeccCCc-----cchhhHHHHHHHHHHcCceEEEEEccCCC--ccccccchhhhccccceeecCcCccchHHHHh
Confidence            899999999984     33889999999999999999999976654  211111       0000001000000     0


Q ss_pred             E--------eecC-CCCccccccc---h------HHHHHHhcCCCCcEEEeCccch---hHHhhh--cc-CcEEEEeccc
Q 039338          152 H--------FHEG-EADKWRYSKG---W------EQFDEENQREPFDVVHSESVAL---PHWLAR--NV-TNLAVSWHGI  207 (493)
Q Consensus       152 ~--------~~~~-~~~~~~~~~~---~------~~~~~~~~~~~~DiI~~~~~~~---~~~~~~--~~-p~~v~~~h~~  207 (493)
                      .        .... .....+....   .      ..+...+++.+||+||+|....   ..++..  .. .+.+.++|+.
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~diihaH~~~~~~~~~~~~~~~~~~~~~~~t~Hg~  153 (406)
T PRK15427         74 HRASQTLRGIHRKNTWKALNLKRYGAESRNLILSAICAQVATPFVADVFIAHFGPAGVTAAKLRELGVLRGKIATIFHGI  153 (406)
T ss_pred             hhhhhHhhhhcccchhccCChhhhhhhhHHHHHHHHHhhhhccCCCCEEEEcCChHHHHHHHHHHhCCCCCCeEEEEccc
Confidence            0        0000 0000000000   0      0112333577899999996532   222221  11 1378899985


Q ss_pred             hhhhhhhhhhhhhhcCCCCccchHhHhHHHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccC
Q 039338          208 ALESLQSGIFQDLTRKPLEPMSLAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINE  287 (493)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~  287 (493)
                      .....  ...                .....    .  ....++++|.++++|+..++.+.+ +|++.+++.++|||+|.
T Consensus       154 d~~~~--~~~----------------~~~~~----~--~~~~~~~ad~vv~~S~~~~~~l~~-~g~~~~ki~vi~nGvd~  208 (406)
T PRK15427        154 DISSR--EVL----------------NHYTP----E--YQQLFRRGDLMLPISDLWAGRLQK-MGCPPEKIAVSRMGVDM  208 (406)
T ss_pred             ccccc--hhh----------------hhhhH----H--HHHHHHhCCEEEECCHHHHHHHHH-cCCCHHHEEEcCCCCCH
Confidence            32110  000                00000    1  124567999999999999999987 58888899999999999


Q ss_pred             CCccCCcccchhhhhhhCCCCCCcEEEEEecccccccChHHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhhh------c
Q 039338          288 NEYGVDLSLGQSFRSRIGIPKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDF------G  361 (493)
Q Consensus       288 ~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~l------~  361 (493)
                      +.|.+....          ..++++.|+++||+.+.||++.+++|++.+.+++++++++++|+|+..+.++++      .
T Consensus       209 ~~f~~~~~~----------~~~~~~~il~vGrl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~G~~~~~l~~~~~~~~l~  278 (406)
T PRK15427        209 TRFSPRPVK----------APATPLEIISVARLTEKKGLHVAIEACRQLKEQGVAFRYRILGIGPWERRLRTLIEQYQLE  278 (406)
T ss_pred             HHcCCCccc----------cCCCCeEEEEEeCcchhcCHHHHHHHHHHHHhhCCCEEEEEEECchhHHHHHHHHHHcCCC
Confidence            887653321          122347899999999999999999999999988889999999999877665543      2


Q ss_pred             CcEEEecCCCHHHHHHHHHHcCEEEeCCCC-----CCCCChHHHHHHHcCCcEEecCCCCCccceeeeCcceEEECC-CH
Q 039338          362 HQVLVMGSMSPAELRAFYNAIDIFVNPTLR-----PQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAP-NV  435 (493)
Q Consensus       362 ~~V~~~g~~~~~~~~~~~~~adv~v~ps~~-----~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~~-d~  435 (493)
                      ++|.|.|+++++++.++|+.||++|+||..     .||+|++++|||+||+|||+|+.+|++ |++.++.+|+++++ |+
T Consensus       279 ~~V~~~G~~~~~el~~~l~~aDv~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g~~-E~v~~~~~G~lv~~~d~  357 (406)
T PRK15427        279 DVVEMPGFKPSHEVKAMLDDADVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSGIP-ELVEADKSGWLVPENDA  357 (406)
T ss_pred             CeEEEeCCCCHHHHHHHHHhCCEEEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCCch-hhhcCCCceEEeCCCCH
Confidence            789999999999999999999999999963     399999999999999999999999998 99999999999999 99


Q ss_pred             HHHHHHHHHHHH-cCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Q 039338          436 ESLHKTLEAAVS-EGPMRLAQRGEACRQYAASMFTANKMALAYERLFLCI  484 (493)
Q Consensus       436 ~~l~~~i~~ll~-~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~i  484 (493)
                      ++++++|.++++ | ++.+++|+++++++++++|+|+.+++++.++|+++
T Consensus       358 ~~la~ai~~l~~~d-~~~~~~~~~~ar~~v~~~f~~~~~~~~l~~~~~~~  406 (406)
T PRK15427        358 QALAQRLAAFSQLD-TDELAPVVKRAREKVETDFNQQVINRELASLLQAL  406 (406)
T ss_pred             HHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhC
Confidence            999999999999 7 89999999999999999999999999999999763

>PLN02939 transferase, transferring glycosyl groups

Probab=100.00  E-value=5.3e-42  Score=349.88  Aligned_cols=399  Identities=19%  Similarity=0.220  Sum_probs=276.1

Q ss_pred             CCCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCcccc---C-----CCC--------
Q 039338           80 SKFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQE---N-----DDG--------  143 (493)
Q Consensus        80 ~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~---~-----~~~--------  143 (493)
                      ...+|||++|+.+..|....||.+.++..|.++|++.||+|.|+++....+.........   .     ..+        
T Consensus       478 ~~~~mkILfVasE~aP~aKtGGLaDVv~sLPkAL~~~GhdV~VIlP~Y~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~v~  557 (977)
T PLN02939        478 TSSGLHIVHIAAEMAPVAKVGGLADVVSGLGKALQKKGHLVEIVLPKYDCMQYDQIRNLKVLDVVVESYFDGNLFKNKIW  557 (977)
T ss_pred             CCCCCEEEEEEcccccccccccHHHHHHHHHHHHHHcCCeEEEEeCCCcccChhhhhcccccceEEEEeecCceeEEEEE
Confidence            456899999999987778999999999999999999999999999987663211111000   0     000        


Q ss_pred             -CCCCCCceEeecC-CC-------Cccccc-------cchHHHHHHhc--CCCCcEEEeCccc--h--hHHhh-------
Q 039338          144 -SNNKYPLLHFHEG-EA-------DKWRYS-------KGWEQFDEENQ--REPFDVVHSESVA--L--PHWLA-------  194 (493)
Q Consensus       144 -~~~~~~~~~~~~~-~~-------~~~~~~-------~~~~~~~~~~~--~~~~DiI~~~~~~--~--~~~~~-------  194 (493)
                       ....+..++++.. .+       ..++..       ...+...+.+.  ..+|||||+|++.  +  +.++.       
T Consensus       558 ~~~~~GV~vyfId~~~~~~fF~R~~iYg~~Dn~~RF~~FsrAaLe~~~~~~~~PDIIH~HDW~TaLV~pll~~~y~~~~~  637 (977)
T PLN02939        558 TGTVEGLPVYFIEPQHPSKFFWRAQYYGEHDDFKRFSYFSRAALELLYQSGKKPDIIHCHDWQTAFVAPLYWDLYAPKGF  637 (977)
T ss_pred             EEEECCeeEEEEecCCchhccCCCCCCCCccHHHHHHHHHHHHHHHHHhcCCCCCEEEECCccHHHHHHHHHHHHhhccC
Confidence             0001122333321 11       001111       01111223332  4699999999873  2  22221       


Q ss_pred             hccCcEEEEeccchhhhhhhhhhhhhhcCCCCccchHhHhHHHHHHHHHHH-HHHhhccCCeEEEcChhHHHHHHHHh--
Q 039338          195 RNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQGVMLKVLN-EIRFFNKYAHHVAISDSCGEMLRDVY--  271 (493)
Q Consensus       195 ~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~ii~~S~~~~~~~~~~~--  271 (493)
                      ...+ ++.|+|+..+......-.....+.+.....  -...+.......++ .+..+..+|.|+++|+.+++.+...+  
T Consensus       638 ~~~k-tVfTIHNl~yQG~f~~~~l~~lGL~~~~l~--~~d~le~~~~~~iN~LK~GIv~AD~VtTVSptYA~EI~te~G~  714 (977)
T PLN02939        638 NSAR-ICFTCHNFEYQGTAPASDLASCGLDVHQLD--RPDRMQDNAHGRINVVKGAIVYSNIVTTVSPTYAQEVRSEGGR  714 (977)
T ss_pred             CCCc-EEEEeCCCcCCCcCCHHHHHHcCCCHHHcc--ChhhhhhccCCchHHHHHHHHhCCeeEeeeHHHHHHHHHHhcc
Confidence            1234 999999987654321111011111100000  00000000000010 01234468999999999999887533  


Q ss_pred             ------CCCCCcEEEecCCccCCCccCCcc-----------------cchhhhhhhCCCCC--CcEEEEEecccccccCh
Q 039338          272 ------QIPSERVHVILNGINENEYGVDLS-----------------LGQSFRSRIGIPKN--ASLVLGVAGRLVKDKGH  326 (493)
Q Consensus       272 ------~~~~~~v~vi~ngvd~~~~~~~~~-----------------~~~~~r~~~~i~~~--~~~~i~~~Gr~~~~Kg~  326 (493)
                            +....++.+|+||+|.+.|.|..+                 .+..+++++|++.+  +.++|+++||+.++||+
T Consensus       715 GL~~~L~~~~~Kl~gIlNGID~e~wnPatD~~L~~~Ys~~dl~GK~~nK~aLRkelGL~~~d~d~pLIg~VGRL~~QKGi  794 (977)
T PLN02939        715 GLQDTLKFHSKKFVGILNGIDTDTWNPSTDRFLKVQYNANDLQGKAANKAALRKQLGLSSADASQPLVGCITRLVPQKGV  794 (977)
T ss_pred             chHHHhccccCCceEEecceehhhcCCccccccccccChhhhhhhhhhhHHHHHHhCCCcccccceEEEEeecCCcccCh
Confidence                  345678999999999999987653                 24668999999853  34789999999999999


Q ss_pred             HHHHHHHHHHHhhCCCeEEEEEeCCCcH---HHHhh----h--cCcEEEecCCCHHHHHHHHHHcCEEEeCCCCCCCCCh
Q 039338          327 PLLHEAFSKLMVKYPDVYLIVAGSGPWE---QRYKD----F--GHQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDL  397 (493)
Q Consensus       327 ~~ll~a~~~l~~~~~~~~l~i~G~g~~~---~~~~~----l--~~~V~~~g~~~~~~~~~~~~~adv~v~ps~~~eg~~~  397 (493)
                      +.+++|+..+.+  ++++|+|+|+|+..   +.+++    +  .++|.|+|.++......+|+.||++|+||.+ |+||+
T Consensus       795 DlLleA~~~Ll~--~dvqLVIvGdGp~~~~e~eL~~La~~l~l~drV~FlG~~de~lah~IYAaADIFLmPSr~-EPfGL  871 (977)
T PLN02939        795 HLIRHAIYKTAE--LGGQFVLLGSSPVPHIQREFEGIADQFQSNNNIRLILKYDEALSHSIYAASDMFIIPSMF-EPCGL  871 (977)
T ss_pred             HHHHHHHHHHhh--cCCEEEEEeCCCcHHHHHHHHHHHHHcCCCCeEEEEeccCHHHHHHHHHhCCEEEECCCc-cCCcH
Confidence            999999998875  47899999999753   23332    2  2689999999877788999999999999965 99999


Q ss_pred             HHHHHHHcCCcEEecCCCCCccceeee---------CcceEEECC-CHHHHHHHHHHHHH---cCcHHHHHHHHHHHHHH
Q 039338          398 TLMEAMMSGKPVMASRFPSIKGTIVVD---------DEFGFMFAP-NVESLHKTLEAAVS---EGPMRLAQRGEACRQYA  464 (493)
Q Consensus       398 ~~~EAm~~G~PvI~s~~~~~~~e~v~~---------~~~G~~~~~-d~~~l~~~i~~ll~---~~~~~~~~~~~~~~~~~  464 (493)
                      +++|||+||+|+|++++||+. ++|.+         +++|++|++ |+++|+++|.+++.   ++++.+.+|++++.   
T Consensus       872 vqLEAMAyGtPPVVs~vGGL~-DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rAL~~~~~dpe~~~~L~~~am---  947 (977)
T PLN02939        872 TQMIAMRYGSVPIVRKTGGLN-DSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERAFNYYKRKPEVWKQLVQKDM---  947 (977)
T ss_pred             HHHHHHHCCCCEEEecCCCCc-ceeecCCccccccCCCceEEecCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHH---
Confidence            999999999999999999998 77765         579999999 99999999999876   22788888887653   


Q ss_pred             HHhcCHHHHHHHHHHHHHHHhhcc
Q 039338          465 ASMFTANKMALAYERLFLCIKNET  488 (493)
Q Consensus       465 ~~~fs~~~~~~~~~~~~~~i~~~~  488 (493)
                      .+.|||+.++++|+++|++++...
T Consensus       948 ~~dFSWe~~A~qYeeLY~~ll~~~  971 (977)
T PLN02939        948 NIDFSWDSSASQYEELYQRAVARA  971 (977)
T ss_pred             HhcCCHHHHHHHHHHHHHHHHHhh
Confidence            466999999999999999988654

>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase

Probab=100.00  E-value=9.2e-42  Score=339.36  Aligned_cols=356  Identities=22%  Similarity=0.295  Sum_probs=261.5

Q ss_pred             CCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCCCc-c---cccc-----chHH
Q 039338           99 PGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEADK-W---RYSK-----GWEQ  169 (493)
Q Consensus        99 ~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~-----~~~~  169 (493)
                      .||+++++.+|+++|+++||+|+|+|...........+.        .....+......+.. .   ....     ....
T Consensus        19 ~GG~e~~v~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~--------~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (405)
T TIGR03449        19 AGGMNVYILETATELARRGIEVDIFTRATRPSQPPVVEV--------APGVRVRNVVAGPYEGLDKEDLPTQLCAFTGGV   90 (405)
T ss_pred             CCCceehHHHHHHHHhhCCCEEEEEecccCCCCCCcccc--------CCCcEEEEecCCCcccCCHHHHHHHHHHHHHHH
Confidence            699999999999999999999999997643301111111        111122211111100 0   0000     0111


Q ss_pred             HHHHhc--CCCCcEEEeCccc--hhHHh---hhccCcEEEEeccchhhhhhhhhhhhhhcCCCCccchHhHhHHHHHHHH
Q 039338          170 FDEENQ--REPFDVVHSESVA--LPHWL---ARNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQGVMLK  242 (493)
Q Consensus       170 ~~~~~~--~~~~DiI~~~~~~--~~~~~---~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (493)
                      +...++  ..+||+||+|...  ..+++   ..++| ++.++|+.....  ......    ...+.     ...     .
T Consensus        91 ~~~~~~~~~~~~Diih~h~~~~~~~~~~~~~~~~~p-~v~t~h~~~~~~--~~~~~~----~~~~~-----~~~-----~  153 (405)
T TIGR03449        91 LRAEARHEPGYYDLIHSHYWLSGQVGWLLRDRWGVP-LVHTAHTLAAVK--NAALAD----GDTPE-----PEA-----R  153 (405)
T ss_pred             HHHHhhccCCCCCeEEechHHHHHHHHHHHHhcCCC-EEEeccchHHHH--HHhccC----CCCCc-----hHH-----H
Confidence            222222  3489999999742  22222   23557 999999864321  100000    00000     011     1


Q ss_pred             HHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCCCCCCcEEEEEeccccc
Q 039338          243 VLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVAGRLVK  322 (493)
Q Consensus       243 ~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Gr~~~  322 (493)
                      ...+...++++|.++++|+...+.+.+.++.+.+++.+|+||+|.+.+.+.  .....+++++++.++ .+|+++||+.+
T Consensus       154 ~~~e~~~~~~~d~vi~~s~~~~~~~~~~~~~~~~ki~vi~ngvd~~~~~~~--~~~~~~~~~~~~~~~-~~i~~~G~l~~  230 (405)
T TIGR03449       154 RIGEQQLVDNADRLIANTDEEARDLVRHYDADPDRIDVVAPGADLERFRPG--DRATERARLGLPLDT-KVVAFVGRIQP  230 (405)
T ss_pred             HHHHHHHHHhcCeEEECCHHHHHHHHHHcCCChhhEEEECCCcCHHHcCCC--cHHHHHHhcCCCCCC-cEEEEecCCCc
Confidence            112335678999999999999998888788888899999999999887654  234567888887665 77889999999


Q ss_pred             ccChHHHHHHHHHHHhhCCC--eEEEEEeCC-----CcHHHHhh----h--cCcEEEecCCCHHHHHHHHHHcCEEEeCC
Q 039338          323 DKGHPLLHEAFSKLMVKYPD--VYLIVAGSG-----PWEQRYKD----F--GHQVLVMGSMSPAELRAFYNAIDIFVNPT  389 (493)
Q Consensus       323 ~Kg~~~ll~a~~~l~~~~~~--~~l~i~G~g-----~~~~~~~~----l--~~~V~~~g~~~~~~~~~~~~~adv~v~ps  389 (493)
                      .||++.+++|++.+.++.++  ++|+++|++     +..+.+++    +  .++|.|+|+++++++.++|+.||++++||
T Consensus       231 ~K~~~~li~a~~~l~~~~~~~~~~l~ivG~~~~~g~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~l~~ad~~v~ps  310 (405)
T TIGR03449       231 LKAPDVLLRAVAELLDRDPDRNLRVIVVGGPSGSGLATPDALIELAAELGIADRVRFLPPRPPEELVHVYRAADVVAVPS  310 (405)
T ss_pred             ccCHHHHHHHHHHHHhhCCCcceEEEEEeCCCCCcchHHHHHHHHHHHcCCCceEEECCCCCHHHHHHHHHhCCEEEECC
Confidence            99999999999999887776  999999952     23333333    2  26899999999999999999999999999


Q ss_pred             CCCCCCChHHHHHHHcCCcEEecCCCCCccceeeeCcceEEECC-CHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHhc
Q 039338          390 LRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAP-NVESLHKTLEAAVSEGPMRLAQRGEACRQYAASMF  468 (493)
Q Consensus       390 ~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~~-d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~f  468 (493)
                      . .|++|++++|||++|+|||+++.|+.+ |++.++.+|+++++ |+++++++|.+++++ ++.+.+|++++++.++ .|
T Consensus       311 ~-~E~~g~~~lEAma~G~Pvi~~~~~~~~-e~i~~~~~g~~~~~~d~~~la~~i~~~l~~-~~~~~~~~~~~~~~~~-~f  386 (405)
T TIGR03449       311 Y-NESFGLVAMEAQACGTPVVAARVGGLP-VAVADGETGLLVDGHDPADWADALARLLDD-PRTRIRMGAAAVEHAA-GF  386 (405)
T ss_pred             C-CCCcChHHHHHHHcCCCEEEecCCCcH-hhhccCCceEECCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHH-hC
Confidence            6 599999999999999999999999988 88999999999998 999999999999998 8899999999999875 59


Q ss_pred             CHHHHHHHHHHHHHHHhh
Q 039338          469 TANKMALAYERLFLCIKN  486 (493)
Q Consensus       469 s~~~~~~~~~~~~~~i~~  486 (493)
                      ||+.+++++.++|++++.
T Consensus       387 sw~~~~~~~~~~y~~~~~  404 (405)
T TIGR03449       387 SWAATADGLLSSYRDALA  404 (405)
T ss_pred             CHHHHHHHHHHHHHHHhh
Confidence            999999999999998763

Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.

>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain

Probab=100.00  E-value=9.8e-42  Score=340.55  Aligned_cols=370  Identities=17%  Similarity=0.160  Sum_probs=247.5

Q ss_pred             CCCCchHHHHHHHHHHHHhCCC--EEEEEecCCCCCC-CCCCccccCCCCCCCCCCceEeecCCCCcccc--------cc
Q 039338           97 TTPGGMERHAHTLHVALARRGH--RVHIFTSPVDNIN-SPSISHQENDDGSNNKYPLLHFHEGEADKWRY--------SK  165 (493)
Q Consensus        97 ~~~gG~~~~~~~l~~~L~~~G~--~V~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~  165 (493)
                      +..||++.++.+|+++|+++||  +|+|+|....... .+....  .......+. .+......+..+..        ..
T Consensus        23 p~~GG~~~~v~~La~~L~~~G~~~~V~v~t~~~~~~~~~~~~~~--~~~~~~~gv-~v~r~~~~~~~~~~~~~~~~~~~~   99 (439)
T TIGR02472        23 ADTGGQTKYVLELARALARRSEVEQVDLVTRLIKDAKVSPDYAQ--PIERIAPGA-RIVRLPFGPRRYLRKELLWPYLDE   99 (439)
T ss_pred             CCCCCcchHHHHHHHHHHhCCCCcEEEEEeccccCcCCCCccCC--CeeEeCCCc-EEEEecCCCCCCcChhhhhhhHHH
Confidence            4779999999999999999997  9999996532200 000000  000011122 22222221111100        01


Q ss_pred             chHHHHHHhcC--CCCcEEEeCccc--hhHHh---hhccCcEEEEeccchhhhhhhhhhhhhhcCCCCccchHhHhHHHH
Q 039338          166 GWEQFDEENQR--EPFDVVHSESVA--LPHWL---ARNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQG  238 (493)
Q Consensus       166 ~~~~~~~~~~~--~~~DiI~~~~~~--~~~~~---~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (493)
                      ....+.+.+++  .+|||||+|+..  +...+   ..++| ++.+.|+...... .    .+.. ... ....+ ...+.
T Consensus       100 ~~~~l~~~~~~~~~~~DvIH~h~~~~~~~~~~~~~~~~~p-~V~t~H~~~~~~~-~----~~~~-~~~-~~~~~-~~~~~  170 (439)
T TIGR02472       100 LADNLLQHLRQQGHLPDLIHAHYADAGYVGARLSRLLGVP-LIFTGHSLGREKR-R----RLLA-AGL-KPQQI-EKQYN  170 (439)
T ss_pred             HHHHHHHHHHHcCCCCCEEEEcchhHHHHHHHHHHHhCCC-EEEecccccchhh-h----hccc-CCC-Chhhh-hhhcc
Confidence            11234444433  379999999742  22211   13457 9999998532110 0    0000 000 00000 01111


Q ss_pred             HHHHHHHHHHhhccCCeEEEcChhHHH-HHHHHhCCCCCcEEEecCCccCCCccCCcccc--hhh---hhhhCCCCCCcE
Q 039338          239 VMLKVLNEIRFFNKYAHHVAISDSCGE-MLRDVYQIPSERVHVILNGINENEYGVDLSLG--QSF---RSRIGIPKNASL  312 (493)
Q Consensus       239 ~~~~~~~~~~~~~~~d~ii~~S~~~~~-~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~--~~~---r~~~~i~~~~~~  312 (493)
                      ...+...+...++.+|.++++|+.... .+....+++.+++.+||||+|.+.|.+.....  ...   +++++.++++ .
T Consensus       171 ~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~ki~vIpnGvd~~~f~~~~~~~~~~~~~~~~~~~~~~~~~-~  249 (439)
T TIGR02472       171 ISRRIEAEEETLAHASLVITSTHQEIEEQYALYDSYQPERMQVIPPGVDLSRFYPPQSSEETSEIDNLLAPFLKDPEK-P  249 (439)
T ss_pred             hHHHHHHHHHHHHhCCEEEECCHHHHHHHHHhccCCCccceEEECCCcChhhcCCCCccccchhHHHHHHhhccccCC-c
Confidence            112222345678899999999976443 34333367888999999999999887643211  112   2334455555 6


Q ss_pred             EEEEecccccccChHHHHHHHHHHHhhCCCeEEE-EEeCCCcHHH---------------Hhh--hcCcEEEecCCCHHH
Q 039338          313 VLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLI-VAGSGPWEQR---------------YKD--FGHQVLVMGSMSPAE  374 (493)
Q Consensus       313 ~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~-i~G~g~~~~~---------------~~~--l~~~V~~~g~~~~~~  374 (493)
                      +|+++||+.+.||++.+++|++.+.....+.+++ ++|+|+..+.               ..+  +.++|.|.|++++++
T Consensus       250 ~i~~vGrl~~~Kg~~~li~A~~~l~~~~~~~~l~li~G~g~~~~~l~~~~~~~~~~~~~~~~~~~l~~~V~f~g~~~~~~  329 (439)
T TIGR02472       250 PILAISRPDRRKNIPSLVEAYGRSPKLQEMANLVLVLGCRDDIRKMESQQREVLQKVLLLIDRYDLYGKVAYPKHHRPDD  329 (439)
T ss_pred             EEEEEcCCcccCCHHHHHHHHHhChhhhhhccEEEEeCCccccccccHHHHHHHHHHHHHHHHcCCCceEEecCCCCHHH
Confidence            7889999999999999999998643211123333 5687654221               111  237899999999999


Q ss_pred             HHHHHHHc----CEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCccceeeeCcceEEECC-CHHHHHHHHHHHHHcC
Q 039338          375 LRAFYNAI----DIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAP-NVESLHKTLEAAVSEG  449 (493)
Q Consensus       375 ~~~~~~~a----dv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~~-d~~~l~~~i~~ll~~~  449 (493)
                      +.++|+.|    |++|+||.+ |+||++++|||+||+|||+|+.||.+ |++.++.+|+++++ |+++++++|.+++++ 
T Consensus       330 ~~~~~~~a~~~~Dv~v~pS~~-E~fg~~~lEAma~G~PvV~s~~gg~~-eiv~~~~~G~lv~~~d~~~la~~i~~ll~~-  406 (439)
T TIGR02472       330 VPELYRLAARSRGIFVNPALT-EPFGLTLLEAAACGLPIVATDDGGPR-DIIANCRNGLLVDVLDLEAIASALEDALSD-  406 (439)
T ss_pred             HHHHHHHHhhcCCEEeccccc-CCcccHHHHHHHhCCCEEEeCCCCcH-HHhcCCCcEEEeCCCCHHHHHHHHHHHHhC-
Confidence            99999987    999999965 99999999999999999999999998 99999999999999 999999999999999 


Q ss_pred             cHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 039338          450 PMRLAQRGEACRQYAASMFTANKMALAYERLFL  482 (493)
Q Consensus       450 ~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~  482 (493)
                      ++.+++|++++++++.++|||+.++++|+++++
T Consensus       407 ~~~~~~~~~~a~~~~~~~fsw~~~~~~~~~l~~  439 (439)
T TIGR02472       407 SSQWQLWSRNGIEGVRRHYSWDAHVEKYLRILQ  439 (439)
T ss_pred             HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence            899999999999999999999999999998863

This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.

>PRK14099 glycogen synthase; Provisional

Probab=100.00  E-value=2.6e-41  Score=338.09  Aligned_cols=392  Identities=19%  Similarity=0.223  Sum_probs=269.7

Q ss_pred             CCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCcc--ccCCCCC----------CCCC
Q 039338           81 KFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISH--QENDDGS----------NNKY  148 (493)
Q Consensus        81 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~--~~~~~~~----------~~~~  148 (493)
                      |++|||++|+.+.-|....||.+.++..|.++|+++||+|.|+.+....+.......  .......          ...+
T Consensus         1 ~~~~~il~v~~E~~p~~k~ggl~dv~~~lp~~l~~~g~~v~v~~P~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (485)
T PRK14099          1 MTPLRVLSVASEIFPLIKTGGLADVAGALPAALKAHGVEVRTLVPGYPAVLAGIEDAEQVHSFPDLFGGPARLLAARAGG   80 (485)
T ss_pred             CCCcEEEEEEeccccccCCCcHHHHHHHHHHHHHHCCCcEEEEeCCCcchhhhhcCceEEEEEeeeCCceEEEEEEEeCC
Confidence            467999999998877789999999999999999999999999999876642111010  0000000          0011


Q ss_pred             CceEeecCC-----CC-cc---------ccccch----HHHHHHh----cCCCCcEEEeCccc---hhHHhh----hccC
Q 039338          149 PLLHFHEGE-----AD-KW---------RYSKGW----EQFDEEN----QREPFDVVHSESVA---LPHWLA----RNVT  198 (493)
Q Consensus       149 ~~~~~~~~~-----~~-~~---------~~~~~~----~~~~~~~----~~~~~DiI~~~~~~---~~~~~~----~~~p  198 (493)
                      ..++++...     ++ .+         +....+    +...++.    .+.+|||||+|++.   ++.++.    ..+|
T Consensus        81 v~~~~~~~~~~f~r~~~~y~~~~~~~~~d~~~rf~~f~~a~~~~~~~~~~~~~pDIiH~Hdw~~~l~~~~l~~~~~~~~~  160 (485)
T PRK14099         81 LDLFVLDAPHLYDRPGNPYVGPDGKDWPDNAQRFAALARAAAAIGQGLVPGFVPDIVHAHDWQAGLAPAYLHYSGRPAPG  160 (485)
T ss_pred             ceEEEEeChHhhCCCCCCCCCccCCCCCcHHHHHHHHHHHHHHHHhhhccCCCCCEEEECCcHHHHHHHHHHhCCCCCCC
Confidence            122222111     00 01         000011    1111222    35799999999852   222222    1235


Q ss_pred             cEEEEeccchhhhhhh-hhhhhhhcCCCCccchHhHhHHHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHh---C--
Q 039338          199 NLAVSWHGIALESLQS-GIFQDLTRKPLEPMSLAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVY---Q--  272 (493)
Q Consensus       199 ~~v~~~h~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~---~--  272 (493)
                       .|.|+|+..+..... .....+ ..+......   ..+ ......-..+..+..+|.|+++|+..++.+.+.+   |  
T Consensus       161 -~V~TiHn~~~qg~~~~~~~~~~-~~~~~~~~~---~~~-~~~~~~~~~k~~i~~ad~vitVS~~~a~ei~~~~~g~gl~  234 (485)
T PRK14099        161 -TVFTIHNLAFQGQFPRELLGAL-GLPPSAFSL---DGV-EYYGGIGYLKAGLQLADRITTVSPTYALEIQGPEAGMGLD  234 (485)
T ss_pred             -EEEeCCCCCCCCcCCHHHHHHc-CCChHHcCc---hhh-hhCCCccHHHHHHHhcCeeeecChhHHHHHhcccCCcChH
Confidence             999999976533211 111111 000000000   000 0000000123557889999999999999887532   1  


Q ss_pred             ----CCCCcEEEecCCccCCCccCCccc-----------------chhhhhhhCCCCC-CcEEEEEecccccccChHHHH
Q 039338          273 ----IPSERVHVILNGINENEYGVDLSL-----------------GQSFRSRIGIPKN-ASLVLGVAGRLVKDKGHPLLH  330 (493)
Q Consensus       273 ----~~~~~v~vi~ngvd~~~~~~~~~~-----------------~~~~r~~~~i~~~-~~~~i~~~Gr~~~~Kg~~~ll  330 (493)
                          .+.+++.+|+||+|.+.|.+..+.                 +..+++++|++.+ +.++|+++||+.++||++.++
T Consensus       235 ~~l~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~li~~VgRL~~~KG~d~Li  314 (485)
T PRK14099        235 GLLRQRADRLSGILNGIDTAVWNPATDELIAATYDVETLAARAANKAALQARFGLDPDPDALLLGVISRLSWQKGLDLLL  314 (485)
T ss_pred             HHHHhhCCCeEEEecCCchhhccccccchhhhcCChhHHHhHHHhHHHHHHHcCCCcccCCcEEEEEecCCccccHHHHH
Confidence                246789999999999988775432                 3567888999753 347888999999999999999


Q ss_pred             HHHHHHHhhCCCeEEEEEeCCCc--HHHHhhh----cCcE-EEecCCCHHHHHHHH-HHcCEEEeCCCCCCCCChHHHHH
Q 039338          331 EAFSKLMVKYPDVYLIVAGSGPW--EQRYKDF----GHQV-LVMGSMSPAELRAFY-NAIDIFVNPTLRPQGLDLTLMEA  402 (493)
Q Consensus       331 ~a~~~l~~~~~~~~l~i~G~g~~--~~~~~~l----~~~V-~~~g~~~~~~~~~~~-~~adv~v~ps~~~eg~~~~~~EA  402 (493)
                      +|+..+.+.  +++|+|+|+|+.  .+.++++    ..++ .++|+  ++++..+| +.||++|+||.+ |+||++++||
T Consensus       315 ~A~~~l~~~--~~~lvivG~G~~~~~~~l~~l~~~~~~~v~~~~G~--~~~l~~~~~a~aDifv~PS~~-E~fGl~~lEA  389 (485)
T PRK14099        315 EALPTLLGE--GAQLALLGSGDAELEARFRAAAQAYPGQIGVVIGY--DEALAHLIQAGADALLVPSRF-EPCGLTQLCA  389 (485)
T ss_pred             HHHHHHHhc--CcEEEEEecCCHHHHHHHHHHHHHCCCCEEEEeCC--CHHHHHHHHhcCCEEEECCcc-CCCcHHHHHH
Confidence            999998763  789999999863  4444443    3455 68998  47888887 579999999975 9999999999


Q ss_pred             HHcCCcEEecCCCCCccceeeeC---------cceEEECC-CHHHHHHHHHH---HHHcCcHHHHHHHHHHHHHHHHhcC
Q 039338          403 MMSGKPVMASRFPSIKGTIVVDD---------EFGFMFAP-NVESLHKTLEA---AVSEGPMRLAQRGEACRQYAASMFT  469 (493)
Q Consensus       403 m~~G~PvI~s~~~~~~~e~v~~~---------~~G~~~~~-d~~~l~~~i~~---ll~~~~~~~~~~~~~~~~~~~~~fs  469 (493)
                      |+||+|+|++++||++ |+|.++         .+|+++++ |+++|+++|.+   +++| ++.+++|+++++   .++||
T Consensus       390 ma~G~ppVvs~~GGl~-d~V~~~~~~~~~~~~~~G~l~~~~d~~~La~ai~~a~~l~~d-~~~~~~l~~~~~---~~~fS  464 (485)
T PRK14099        390 LRYGAVPVVARVGGLA-DTVVDANEMAIATGVATGVQFSPVTADALAAALRKTAALFAD-PVAWRRLQRNGM---TTDVS  464 (485)
T ss_pred             HHCCCCcEEeCCCCcc-ceeecccccccccCCCceEEeCCCCHHHHHHHHHHHHHHhcC-HHHHHHHHHHhh---hhcCC
Confidence            9999988889999998 777664         68999999 99999999997   6667 888999999886   35699


Q ss_pred             HHHHHHHHHHHHHHHhhcc
Q 039338          470 ANKMALAYERLFLCIKNET  488 (493)
Q Consensus       470 ~~~~~~~~~~~~~~i~~~~  488 (493)
                      |++++++|+++|+++++++
T Consensus       465 w~~~a~~y~~lY~~l~~~~  483 (485)
T PRK14099        465 WRNPAQHYAALYRSLVAER  483 (485)
T ss_pred             hHHHHHHHHHHHHHHHhhh
Confidence            9999999999999998654

>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional

Probab=100.00  E-value=7.6e-41  Score=327.78  Aligned_cols=344  Identities=19%  Similarity=0.292  Sum_probs=258.7

Q ss_pred             EEEE-EeccCCCC-CCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCC----
Q 039338           85 KIAV-FSRKWPIS-TTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEA----  158 (493)
Q Consensus        85 kIl~-v~~~~p~~-~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  158 (493)
                      ||++ +|+.+|.+ ...||+|+++..+++.|+   ++|++++...+.  .+..+.       ...+..++......    
T Consensus         4 ~~~~~~~~~~~~p~~~~g~ve~~~~~~~~~l~---~~~~~~~~~~~~--~~~~~~-------~~~~~~~~~~~~~~~~~~   71 (380)
T PRK15484          4 KIIFTVTPIFSIPPRGAAAVETWIYQVAKRTS---IPNRIACIKNPG--YPEYTK-------VNDNCDIHYIGFSRIYKR   71 (380)
T ss_pred             eEEEEeccCCCCCCccccHHHHHHHHhhhhcc---CCeeEEEecCCC--CCchhh-------ccCCCceEEEEeccccch
Confidence            4544 55577543 368999999999999994   399999987766  222211       01112233321110    


Q ss_pred             --Cc------cccccchHHHHHHhcCCCCcEEEeCccc-hhHHhhhccC--cEEEEeccchhhhhhhhhhhhhhcCCCCc
Q 039338          159 --DK------WRYSKGWEQFDEENQREPFDVVHSESVA-LPHWLARNVT--NLAVSWHGIALESLQSGIFQDLTRKPLEP  227 (493)
Q Consensus       159 --~~------~~~~~~~~~~~~~~~~~~~DiI~~~~~~-~~~~~~~~~p--~~v~~~h~~~~~~~~~~~~~~~~~~~~~~  227 (493)
                        ..      ..+......+.......++|+||+|+.. +...+....|  +++.++|+.+..                 
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~v~~~~~~~~~~~~~~~~~~~v~~~h~~~~~-----------------  134 (380)
T PRK15484         72 LFQKWTRLDPLPYSQRILNIAHKFTITKDSVIVIHNSMKLYRQIRERAPQAKLVMHMHNAFEP-----------------  134 (380)
T ss_pred             hhhhhhccCchhHHHHHHHHHHhcCCCCCcEEEEeCcHHhHHHHHhhCCCCCEEEEEecccCh-----------------
Confidence              11      1111111222222234679999999753 2222233222  389999964210                 


Q ss_pred             cchHhHhHHHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCCC
Q 039338          228 MSLAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIP  307 (493)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~  307 (493)
                                          ..+.+++.++++|++.++.+.+.+  +..++.+||||+|.+.|.+..  ....+++++++
T Consensus       135 --------------------~~~~~~~~ii~~S~~~~~~~~~~~--~~~~i~vIpngvd~~~~~~~~--~~~~~~~~~~~  190 (380)
T PRK15484        135 --------------------ELLDKNAKIIVPSQFLKKFYEERL--PNADISIVPNGFCLETYQSNP--QPNLRQQLNIS  190 (380)
T ss_pred             --------------------hHhccCCEEEEcCHHHHHHHHhhC--CCCCEEEecCCCCHHHcCCcc--hHHHHHHhCCC
Confidence                                223467899999999999988743  567899999999988776543  34567788887


Q ss_pred             CCCcEEEEEecccccccChHHHHHHHHHHHhhCCCeEEEEEeCCCcH---------HHHh----hhcCcEEEecCCCHHH
Q 039338          308 KNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWE---------QRYK----DFGHQVLVMGSMSPAE  374 (493)
Q Consensus       308 ~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~---------~~~~----~l~~~V~~~g~~~~~~  374 (493)
                      .+. .+|+|+||+.+.||++.+++|+..+.+++|+++|+++|+|+..         +.++    +++.+|.|+|++++++
T Consensus       191 ~~~-~~il~~Grl~~~Kg~~~Li~A~~~l~~~~p~~~lvivG~g~~~~~~~~~~~~~~l~~~~~~l~~~v~~~G~~~~~~  269 (380)
T PRK15484        191 PDE-TVLLYAGRISPDKGILLLMQAFEKLATAHSNLKLVVVGDPTASSKGEKAAYQKKVLEAAKRIGDRCIMLGGQPPEK  269 (380)
T ss_pred             CCC-eEEEEeccCccccCHHHHHHHHHHHHHhCCCeEEEEEeCCccccccchhHHHHHHHHHHHhcCCcEEEeCCCCHHH
Confidence            666 6788999999999999999999999988899999999987531         1222    3457899999999999


Q ss_pred             HHHHHHHcCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCccceeeeCcceE-EECC-CHHHHHHHHHHHHHcCcHH
Q 039338          375 LRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGF-MFAP-NVESLHKTLEAAVSEGPMR  452 (493)
Q Consensus       375 ~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~-~~~~-d~~~l~~~i~~ll~~~~~~  452 (493)
                      +.++|++||++|+||.+.|+||++++|||+||+|||+++.||.+ |++.++.+|+ ++++ |+++++++|.++++| ++.
T Consensus       270 l~~~~~~aDv~v~pS~~~E~f~~~~lEAma~G~PVI~s~~gg~~-Eiv~~~~~G~~l~~~~d~~~la~~I~~ll~d-~~~  347 (380)
T PRK15484        270 MHNYYPLADLVVVPSQVEEAFCMVAVEAMAAGKPVLASTKGGIT-EFVLEGITGYHLAEPMTSDSIISDINRTLAD-PEL  347 (380)
T ss_pred             HHHHHHhCCEEEeCCCCccccccHHHHHHHcCCCEEEeCCCCcH-hhcccCCceEEEeCCCCHHHHHHHHHHHHcC-HHH
Confidence            99999999999999975699999999999999999999999998 8999999999 4566 999999999999998 664


Q ss_pred             HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHh
Q 039338          453 LAQRGEACRQYAASMFTANKMALAYERLFLCIK  485 (493)
Q Consensus       453 ~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~i~  485 (493)
                       .++++++++.+.++|+|++++++++++|+...
T Consensus       348 -~~~~~~ar~~~~~~fsw~~~a~~~~~~l~~~~  379 (380)
T PRK15484        348 -TQIAEQAKDFVFSKYSWEGVTQRFEEQIHNWF  379 (380)
T ss_pred             -HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhc
Confidence             78999999999999999999999999998753

>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type

Probab=100.00  E-value=1.1e-41  Score=343.92  Aligned_cols=387  Identities=21%  Similarity=0.251  Sum_probs=268.9

Q ss_pred             eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccc---c--CCC-----------CCCCC
Q 039338           84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQ---E--NDD-----------GSNNK  147 (493)
Q Consensus        84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~---~--~~~-----------~~~~~  147 (493)
                      |||++|+.++.|....||.+.++..|.++|+++||+|.|+++.............   .  .+.           .....
T Consensus         1 m~i~~vs~E~~P~~k~GGl~~~v~~L~~aL~~~G~~v~v~~p~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (473)
T TIGR02095         1 MRVLFVAAEMAPFAKTGGLADVVGALPKALAALGHDVRVLLPAYGCIEDEVDDQVKVVELVDLSVGPRTLYVKVFEGVVE   80 (473)
T ss_pred             CeEEEEEeccccccCcCcHHHHHHHHHHHHHHcCCeEEEEecCCcChhhhhccCeEEEEEEEEeecCceeEEEEEEEEEC
Confidence            8999999997666679999999999999999999999999987765322111000   0  000           00011


Q ss_pred             CCceEeecCCC-----C-ccc--ccc-------chHHHHHHh--cCCCCcEEEeCccc--h-hHHhhhc-----cCcEEE
Q 039338          148 YPLLHFHEGEA-----D-KWR--YSK-------GWEQFDEEN--QREPFDVVHSESVA--L-PHWLARN-----VTNLAV  202 (493)
Q Consensus       148 ~~~~~~~~~~~-----~-~~~--~~~-------~~~~~~~~~--~~~~~DiI~~~~~~--~-~~~~~~~-----~p~~v~  202 (493)
                      ...++++....     . .+.  +..       ......+.+  ...+|||||+|.+.  + +.++...     +| ++.
T Consensus        81 ~v~~~~i~~~~~~~r~~~~y~~~~~d~~~r~~~f~~a~~~~~~~~~~~~DiiH~hdw~~~~~~~~l~~~~~~~~~~-~v~  159 (473)
T TIGR02095        81 GVPVYFIDNPSLFDRPGGIYGDDYPDNAERFAFFSRAAAELLSGLGWQPDVVHAHDWHTALVPALLKAVYRPNPIK-TVF  159 (473)
T ss_pred             CceEEEEECHHHcCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCEEEECCcHHHHHHHHHHhhccCCCCC-EEE
Confidence            12222221110     0 111  100       111122222  24689999999752  2 2223221     56 999


Q ss_pred             Eeccchhhhhhh-hhhhhhhcCCCCccchHhHhHHHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHH-hC--------
Q 039338          203 SWHGIALESLQS-GIFQDLTRKPLEPMSLAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDV-YQ--------  272 (493)
Q Consensus       203 ~~h~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~-~~--------  272 (493)
                      ++|+..+..... ...... ..+...    +.........+.-..+..+..+|.++++|+.+++.+.+. ++        
T Consensus       160 TiH~~~~~g~~~~~~~~~~-~~~~~~----~~~~~~~~~~~~~~~k~~~~~ad~v~tVS~~~~~ei~~~~~~~~l~~~l~  234 (473)
T TIGR02095       160 TIHNLAYQGVFPADDFSEL-GLPPEY----FHMEGLEFYGRVNFLKGGIVYADRVTTVSPTYAREILTPEFGYGLDGVLK  234 (473)
T ss_pred             EcCCCccCCcCCHHHHHHc-CCChHH----cCchhhhcCCchHHHHHHHHhCCcCeecCHhHHHHhcCCcCCccchhHHH
Confidence            999976432111 111110 000000    000000000001112356789999999999998887642 22        


Q ss_pred             CCCCcEEEecCCccCCCccCCcc-----------------cchhhhhhhCCCCC-CcEEEEEecccccccChHHHHHHHH
Q 039338          273 IPSERVHVILNGINENEYGVDLS-----------------LGQSFRSRIGIPKN-ASLVLGVAGRLVKDKGHPLLHEAFS  334 (493)
Q Consensus       273 ~~~~~v~vi~ngvd~~~~~~~~~-----------------~~~~~r~~~~i~~~-~~~~i~~~Gr~~~~Kg~~~ll~a~~  334 (493)
                      .+..++.+|+||+|.+.|.+..+                 .+..+++++|++.+ +.++|+++||+.++||++.+++|+.
T Consensus       235 ~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~~i~~vGrl~~~Kg~~~li~a~~  314 (473)
T TIGR02095       235 ARSGKLRGILNGIDTEVWNPATDPYLKANYSADDLAGKAENKEALQEELGLPVDDDVPLFGVISRLTQQKGVDLLLAALP  314 (473)
T ss_pred             hcCCCeEEEeCCCCccccCCCCCcccccCcCccchhhhhhhHHHHHHHcCCCccCCCCEEEEEecCccccChHHHHHHHH
Confidence            13569999999999998876432                 13457889999862 3478889999999999999999999


Q ss_pred             HHHhhCCCeEEEEEeCCC--cHHHHhhh----cCcEEEecCCCHHHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcCCc
Q 039338          335 KLMVKYPDVYLIVAGSGP--WEQRYKDF----GHQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKP  408 (493)
Q Consensus       335 ~l~~~~~~~~l~i~G~g~--~~~~~~~l----~~~V~~~g~~~~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G~P  408 (493)
                      ++.++  +++|+|+|+|+  ..+.++++    ..++.+.+..+.+++..+|++||++++||.+ |++|++++|||+||+|
T Consensus       315 ~l~~~--~~~lvi~G~g~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~~~aDv~l~pS~~-E~~gl~~lEAma~G~p  391 (473)
T TIGR02095       315 ELLEL--GGQLVVLGTGDPELEEALRELAERYPGNVRVIIGYDEALAHLIYAGADFILMPSRF-EPCGLTQLYAMRYGTV  391 (473)
T ss_pred             HHHHc--CcEEEEECCCCHHHHHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHhCCEEEeCCCc-CCcHHHHHHHHHCCCC
Confidence            99864  59999999984  33444443    3678888888888899999999999999965 9999999999999999


Q ss_pred             EEecCCCCCccceeeeC------cceEEECC-CHHHHHHHHHHHHH----cCcHHHHHHHHHHHHHHHHhcCHHHHHHHH
Q 039338          409 VMASRFPSIKGTIVVDD------EFGFMFAP-NVESLHKTLEAAVS----EGPMRLAQRGEACRQYAASMFTANKMALAY  477 (493)
Q Consensus       409 vI~s~~~~~~~e~v~~~------~~G~~~~~-d~~~l~~~i~~ll~----~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~  477 (493)
                      ||+++.||.. |++.++      ++|+++++ |+++++++|.+++.    + ++.+++|++++.   ++.|||++++++|
T Consensus       392 vI~s~~gg~~-e~v~~~~~~~~~~~G~l~~~~d~~~la~~i~~~l~~~~~~-~~~~~~~~~~~~---~~~fsw~~~a~~~  466 (473)
T TIGR02095       392 PIVRRTGGLA-DTVVDGDPEAESGTGFLFEEYDPGALLAALSRALRLYRQD-PSLWEALQKNAM---SQDFSWDKSAKQY  466 (473)
T ss_pred             eEEccCCCcc-ceEecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHHhcC-HHHHHHHHHHHh---ccCCCcHHHHHHH
Confidence            9999999998 888887      89999999 99999999999888    6 788888888775   3569999999999


Q ss_pred             HHHHHHH
Q 039338          478 ERLFLCI  484 (493)
Q Consensus       478 ~~~~~~i  484 (493)
                      +++|+++
T Consensus       467 ~~~Y~~l  473 (473)
T TIGR02095       467 VELYRSL  473 (473)
T ss_pred             HHHHHhC
Confidence            9999874

This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.

>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family

Probab=100.00  E-value=1.6e-40  Score=328.73  Aligned_cols=359  Identities=25%  Similarity=0.325  Sum_probs=263.6

Q ss_pred             eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCCCcccc
Q 039338           84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEADKWRY  163 (493)
Q Consensus        84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (493)
                      |||++++..||| ...||++.++.+|+++|.++ |+|+|++.....  .    .        .....+............
T Consensus         1 mkI~~i~~~~~p-~~~GG~~~~v~~l~~~l~~~-~~v~v~~~~~~~--~----~--------~~~~~~~~~~~~~~~~~~   64 (388)
T TIGR02149         1 MKVTVLTREYPP-NVYGGAGVHVEELTRELARL-MDVDVRCFGDQR--F----D--------SEGLTVKGYRPWSELKEA   64 (388)
T ss_pred             CeeEEEecccCc-cccccHhHHHHHHHHHHHHh-cCeeEEcCCCch--h----c--------CCCeEEEEecChhhccch
Confidence            899999999986 24599999999999999987 788887765432  0    0        111111111110000001


Q ss_pred             ccchH----HHHHHhcCCCCcEEEeCccc--hhHHhh---hccCcEEEEeccchhhhhhhhhhhhhhcCCCCccchHhHh
Q 039338          164 SKGWE----QFDEENQREPFDVVHSESVA--LPHWLA---RNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNK  234 (493)
Q Consensus       164 ~~~~~----~~~~~~~~~~~DiI~~~~~~--~~~~~~---~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (493)
                      ...+.    .+.......++|+||+|+..  +..++.   .++| ++.++|+.......   ......       ..  .
T Consensus        65 ~~~~~~~~~~~~~~~~~~~~divh~~~~~~~~~~~~~~~~~~~p-~v~~~h~~~~~~~~---~~~~~~-------~~--~  131 (388)
T TIGR02149        65 NKALGTFSVDLAMANDPVDADVVHSHTWYTFLAGHLAKKLYDKP-LVVTAHSLEPLRPW---KEEQLG-------GG--Y  131 (388)
T ss_pred             hhhhhhhhHHHHHhhCCCCCCeEeecchhhhhHHHHHHHhcCCC-EEEEeecccccccc---cccccc-------cc--h
Confidence            11111    11222234579999999752  222222   3457 99999986432110   000000       00  0


Q ss_pred             HHHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHh-CCCCCcEEEecCCccCCCccCCcccchhhhhhhCCCCCCcEE
Q 039338          235 SLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVY-QIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLV  313 (493)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~-~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~  313 (493)
                      .+...     .+...++.+|.++++|+.+++.+.+.+ +++..++.+|+||+|.+.+.+.  .....+.+++++.+. ++
T Consensus       132 ~~~~~-----~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~~~i~vi~ng~~~~~~~~~--~~~~~~~~~~~~~~~-~~  203 (388)
T TIGR02149       132 KLSSW-----AEKTAIEAADRVIAVSGGMREDILKYYPDLDPEKVHVIYNGIDTKEYKPD--DGNVVLDRYGIDRSR-PY  203 (388)
T ss_pred             hHHHH-----HHHHHHhhCCEEEEccHHHHHHHHHHcCCCCcceEEEecCCCChhhcCCC--chHHHHHHhCCCCCc-eE
Confidence            11111     133567899999999999999998876 6677899999999999887654  334577888887766 67


Q ss_pred             EEEecccccccChHHHHHHHHHHHhhCCCeEEEEEeCCCcHH----HHhh----hc---CcEEEe-cCCCHHHHHHHHHH
Q 039338          314 LGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQ----RYKD----FG---HQVLVM-GSMSPAELRAFYNA  381 (493)
Q Consensus       314 i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~----~~~~----l~---~~V~~~-g~~~~~~~~~~~~~  381 (493)
                      |+|+||+.+.||++.++++++++.   ++++++++|+|+...    .+++    +.   ++|.++ |.++.+++.++|+.
T Consensus       204 i~~~Grl~~~Kg~~~li~a~~~l~---~~~~l~i~g~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~  280 (388)
T TIGR02149       204 ILFVGRITRQKGVPHLLDAVHYIP---KDVQVVLCAGAPDTPEVAEEVRQAVALLDRNRTGIIWINKMLPKEELVELLSN  280 (388)
T ss_pred             EEEEcccccccCHHHHHHHHHHHh---hcCcEEEEeCCCCcHHHHHHHHHHHHHhccccCceEEecCCCCHHHHHHHHHh
Confidence            889999999999999999999985   367899988765432    2222    22   346665 67899999999999


Q ss_pred             cCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCccceeeeCcceEEECC-CH------HHHHHHHHHHHHcCcHHHH
Q 039338          382 IDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAP-NV------ESLHKTLEAAVSEGPMRLA  454 (493)
Q Consensus       382 adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~~-d~------~~l~~~i~~ll~~~~~~~~  454 (493)
                      ||++|+||.. |++|++++|||++|+|||+++.++.+ |++.++.+|+++++ |+      ++++++|.+++++ ++.++
T Consensus       281 aDv~v~ps~~-e~~g~~~lEA~a~G~PvI~s~~~~~~-e~i~~~~~G~~~~~~~~~~~~~~~~l~~~i~~l~~~-~~~~~  357 (388)
T TIGR02149       281 AEVFVCPSIY-EPLGIVNLEAMACGTPVVASATGGIP-EVVVDGETGFLVPPDNSDADGFQAELAKAINILLAD-PELAK  357 (388)
T ss_pred             CCEEEeCCcc-CCCChHHHHHHHcCCCEEEeCCCCHH-HHhhCCCceEEcCCCCCcccchHHHHHHHHHHHHhC-HHHHH
Confidence            9999999965 99999999999999999999999998 89999999999998 87      9999999999998 99999


Q ss_pred             HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHh
Q 039338          455 QRGEACRQYAASMFTANKMALAYERLFLCIK  485 (493)
Q Consensus       455 ~~~~~~~~~~~~~fs~~~~~~~~~~~~~~i~  485 (493)
                      +|++++++.+.++|||+.+++++.++|++++
T Consensus       358 ~~~~~a~~~~~~~~s~~~~~~~~~~~y~~~~  388 (388)
T TIGR02149       358 KMGIAGRKRAEEEFSWGSIAKKTVEMYRKVL  388 (388)
T ss_pred             HHHHHHHHHHHHhCCHHHHHHHHHHHHHhhC
Confidence            9999999999999999999999999999864

This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.

>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=9.6e-41  Score=328.44  Aligned_cols=355  Identities=23%  Similarity=0.282  Sum_probs=265.9

Q ss_pred             eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCCCcccc
Q 039338           84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEADKWRY  163 (493)
Q Consensus        84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (493)
                      |||++++.  |   ..||+++++..++++|.++||+|+|++.....  ... ......   ......+............
T Consensus         1 mki~~~~~--p---~~gG~~~~~~~la~~L~~~G~~v~v~~~~~~~--~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~   69 (371)
T cd04962           1 MKIGIVCY--P---TYGGSGVVATELGKALARRGHEVHFITSSRPF--RLD-EYSPNI---FFHEVEVPQYPLFQYPPYD   69 (371)
T ss_pred             CceeEEEE--e---CCCCccchHHHHHHHHHhcCCceEEEecCCCc--chh-hhccCe---EEEEecccccchhhcchhH
Confidence            89999984  3   56999999999999999999999999875432  100 000000   0000000000000000111


Q ss_pred             ccchHHHHHHhcCCCCcEEEeCccc---hhHHhhh------ccCcEEEEeccchhhhhhhhhhhhhhcCCCCccchHhHh
Q 039338          164 SKGWEQFDEENQREPFDVVHSESVA---LPHWLAR------NVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNK  234 (493)
Q Consensus       164 ~~~~~~~~~~~~~~~~DiI~~~~~~---~~~~~~~------~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (493)
                      ......+.+.+++.+||+||+|...   ...++..      ++| ++.++|+........          .        .
T Consensus        70 ~~~~~~l~~~i~~~~~divh~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~h~~~~~~~~~----------~--------~  130 (371)
T cd04962          70 LALASKIAEVAKRYKLDLLHVHYAVPHAVAAYLAREILGKKDLP-VVTTLHGTDITLVGQ----------D--------P  130 (371)
T ss_pred             HHHHHHHHHHHhcCCccEEeecccCCccHHHHHHHHhcCcCCCc-EEEEEcCCccccccc----------c--------c
Confidence            1234566666778899999998642   2222221      456 889999753211000          0        0


Q ss_pred             HHHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCCCCCCcEEE
Q 039338          235 SLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVL  314 (493)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i  314 (493)
                      .. ..+     .+..++++|.++++|+.+.+.+.+.++ ...++.+|+||+|...+.+..  ....++++++++++ .++
T Consensus       131 ~~-~~~-----~~~~~~~~d~ii~~s~~~~~~~~~~~~-~~~~i~vi~n~~~~~~~~~~~--~~~~~~~~~~~~~~-~~i  200 (371)
T cd04962         131 SF-QPA-----TRFSIEKSDGVTAVSESLRQETYELFD-ITKEIEVIPNFVDEDRFRPKP--DEALKRRLGAPEGE-KVL  200 (371)
T ss_pred             cc-hHH-----HHHHHhhCCEEEEcCHHHHHHHHHhcC-CcCCEEEecCCcCHhhcCCCc--hHHHHHhcCCCCCC-eEE
Confidence            00 111     124567899999999999999988653 467899999999987765443  23456677877766 778


Q ss_pred             EEecccccccChHHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhhh------cCcEEEecCCCHHHHHHHHHHcCEEEeC
Q 039338          315 GVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDF------GHQVLVMGSMSPAELRAFYNAIDIFVNP  388 (493)
Q Consensus       315 ~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~l------~~~V~~~g~~~~~~~~~~~~~adv~v~p  388 (493)
                      +++|++.+.||++.+++++.++.++ .+++++++|.|+..+.++++      .++|.|.|+.  +++.++|+.||++++|
T Consensus       201 l~~g~l~~~K~~~~li~a~~~l~~~-~~~~l~i~G~g~~~~~~~~~~~~~~~~~~v~~~g~~--~~~~~~~~~~d~~v~p  277 (371)
T cd04962         201 IHISNFRPVKRIDDVIRIFAKVRKE-VPARLLLVGDGPERSPAERLARELGLQDDVLFLGKQ--DHVEELLSIADLFLLP  277 (371)
T ss_pred             EEecccccccCHHHHHHHHHHHHhc-CCceEEEEcCCcCHHHHHHHHHHcCCCceEEEecCc--ccHHHHHHhcCEEEeC
Confidence            8999999999999999999999766 56899999999876655443      2689999987  5899999999999999


Q ss_pred             CCCCCCCChHHHHHHHcCCcEEecCCCCCccceeeeCcceEEECC-CHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHh
Q 039338          389 TLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAP-NVESLHKTLEAAVSEGPMRLAQRGEACRQYAASM  467 (493)
Q Consensus       389 s~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~~-d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~  467 (493)
                      |. .|++|++++|||++|+|||+++.++.. |++.++.+|+++++ |++++++++.+++++ ++.+.+|++++++.+.+.
T Consensus       278 s~-~E~~~~~~~EAma~g~PvI~s~~~~~~-e~i~~~~~G~~~~~~~~~~l~~~i~~l~~~-~~~~~~~~~~~~~~~~~~  354 (371)
T cd04962         278 SE-KESFGLAALEAMACGVPVVASNAGGIP-EVVKHGETGFLVDVGDVEAMAEYALSLLED-DELWQEFSRAARNRAAER  354 (371)
T ss_pred             CC-cCCCccHHHHHHHcCCCEEEeCCCCch-hhhcCCCceEEcCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHh
Confidence            96 599999999999999999999999998 89999999999999 999999999999998 899999999999998888


Q ss_pred             cCHHHHHHHHHHHHHHH
Q 039338          468 FTANKMALAYERLFLCI  484 (493)
Q Consensus       468 fs~~~~~~~~~~~~~~i  484 (493)
                      |+|+.+++++.++|+++
T Consensus       355 fs~~~~~~~~~~~y~~~  371 (371)
T cd04962         355 FDSERIVPQYEALYRRL  371 (371)
T ss_pred             CCHHHHHHHHHHHHHhC
Confidence            99999999999999864

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog

>PRK14098 glycogen synthase; Provisional

Probab=100.00  E-value=5.6e-40  Score=328.78  Aligned_cols=387  Identities=20%  Similarity=0.217  Sum_probs=268.0

Q ss_pred             eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCC--C-cc--ccCCCC-CC------------
Q 039338           84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPS--I-SH--QENDDG-SN------------  145 (493)
Q Consensus        84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~--~-~~--~~~~~~-~~------------  145 (493)
                      |||++|+.+.-|....||.+.++..|.++|+++||+|.|+.+....+....  . ..  ...... ..            
T Consensus         6 ~~il~v~~E~~p~~k~Ggl~dv~~~Lp~al~~~g~~v~v~~P~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (489)
T PRK14098          6 FKVLYVSGEVSPFVRVSALADFMASFPQALEEEGFEARIMMPKYGTINDRKFRLHDVLRLSDIEVPLKEKTDLLHVKVTA   85 (489)
T ss_pred             cEEEEEeecchhhcccchHHHHHHHHHHHHHHCCCeEEEEcCCCCchhhhhhccccceEEEEEEEeecCeeEEEEEEEec
Confidence            999999998866789999999999999999999999999999876643210  0 00  000000 00            


Q ss_pred             CC--CCceEeecCC-----CCccc-------c---c----cchHHHHHHhc--CCCCcEEEeCccc---hhHHhhh----
Q 039338          146 NK--YPLLHFHEGE-----ADKWR-------Y---S----KGWEQFDEENQ--REPFDVVHSESVA---LPHWLAR----  195 (493)
Q Consensus       146 ~~--~~~~~~~~~~-----~~~~~-------~---~----~~~~~~~~~~~--~~~~DiI~~~~~~---~~~~~~~----  195 (493)
                      ..  ...++++...     ...+.       +   .    .......+.++  ..+|||||+|++.   ++.++..    
T Consensus        86 ~~~~~v~~~~~~~~~~f~r~~~y~~~~~g~~~~d~~~rf~~f~~a~l~~~~~~~~~pDiiH~hdw~t~l~~~~l~~~~~~  165 (489)
T PRK14098         86 LPSSKIQTYFLYNEKYFKRNGLFTDMSLGGDLKGSAEKVIFFNVGVLETLQRLGWKPDIIHCHDWYAGLVPLLLKTVYAD  165 (489)
T ss_pred             ccCCCceEEEEeCHHHcCCCCcCCCCccCCCCCcHHHHHHHHHHHHHHHHHhcCCCCCEEEecCcHHHHHHHHHHHHhhh
Confidence            00  1122222100     00110       0   0    00111222222  4689999999752   2333321    


Q ss_pred             -----ccCcEEEEeccchhhhhhh-hhhhhhhcCCCCccchHhHhHHHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHH
Q 039338          196 -----NVTNLAVSWHGIALESLQS-GIFQDLTRKPLEPMSLAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRD  269 (493)
Q Consensus       196 -----~~p~~v~~~h~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~  269 (493)
                           .+| +|.|+|+..+..... .....+  .+..     ....+.......-..+..+..+|.|+++|+..++.+.+
T Consensus       166 ~~~~~~~~-~V~TiHn~~~qg~~~~~~~~~~--~~~~-----~~~~~~~~~~~~n~lk~~i~~ad~VitVS~~~a~ei~~  237 (489)
T PRK14098        166 HEFFKDIK-TVLTIHNVYRQGVLPFKVFQKL--LPEE-----VCSGLHREGDEVNMLYTGVEHADLLTTTSPRYAEEIAG  237 (489)
T ss_pred             ccccCCCC-EEEEcCCCcccCCCCHHHHHHh--CCHH-----hhhhhhhcCCcccHHHHHHHhcCcceeeCHHHHHHhCc
Confidence                 456 999999875422110 001000  0000     00000000000001224567899999999999998875


Q ss_pred             H----hCCC------CCcEEEecCCccCCCccCCccc-----------------chhhhhhhCCCCC-CcEEEEEecccc
Q 039338          270 V----YQIP------SERVHVILNGINENEYGVDLSL-----------------GQSFRSRIGIPKN-ASLVLGVAGRLV  321 (493)
Q Consensus       270 ~----~~~~------~~~v~vi~ngvd~~~~~~~~~~-----------------~~~~r~~~~i~~~-~~~~i~~~Gr~~  321 (493)
                      .    +|++      ..++.+|+||+|.+.|.+..+.                 +..+++++|++.+ +.++|+++||+.
T Consensus       238 ~~~~~~gl~~~l~~~~~kl~~I~NGID~~~~~p~~d~~~~~~~~~~~~~~k~~~k~~l~~~lgl~~~~~~~~i~~vgRl~  317 (489)
T PRK14098        238 DGEEAFGLDKVLEERKMRLHGILNGIDTRQWNPSTDKLIKKRYSIERLDGKLENKKALLEEVGLPFDEETPLVGVIINFD  317 (489)
T ss_pred             CCCCCcChHHHHHhcCCCeeEEeCCccccccCCcccccccccCCcchhhhHHHHHHHHHHHhCCCCccCCCEEEEecccc
Confidence            2    3443      5799999999999998875431                 3456778888743 347889999999


Q ss_pred             cccChHHHHHHHHHHHhhCCCeEEEEEeCCCc--HHHHhhh----cCcEEEecCCCHHHHHHHHHHcCEEEeCCCCCCCC
Q 039338          322 KDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPW--EQRYKDF----GHQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGL  395 (493)
Q Consensus       322 ~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~--~~~~~~l----~~~V~~~g~~~~~~~~~~~~~adv~v~ps~~~eg~  395 (493)
                      ++||++.+++|+.++.+  .+++|+|+|+|+.  .+.++++    .++|.|.|.++++++..+|++||++|+||. .|++
T Consensus       318 ~~KG~d~li~a~~~l~~--~~~~lvivG~G~~~~~~~l~~l~~~~~~~V~~~g~~~~~~~~~~~a~aDi~l~PS~-~E~~  394 (489)
T PRK14098        318 DFQGAELLAESLEKLVE--LDIQLVICGSGDKEYEKRFQDFAEEHPEQVSVQTEFTDAFFHLAIAGLDMLLMPGK-IESC  394 (489)
T ss_pred             ccCcHHHHHHHHHHHHh--cCcEEEEEeCCCHHHHHHHHHHHHHCCCCEEEEEecCHHHHHHHHHhCCEEEeCCC-CCCc
Confidence            99999999999999976  3799999999874  3444443    478999999999999999999999999996 5999


Q ss_pred             ChHHHHHHHcCCcEEecCCCCCccceeee----CcceEEECC-CHHHHHHHHHHHH---HcCcHHHHHHHHHHHHHHHHh
Q 039338          396 DLTLMEAMMSGKPVMASRFPSIKGTIVVD----DEFGFMFAP-NVESLHKTLEAAV---SEGPMRLAQRGEACRQYAASM  467 (493)
Q Consensus       396 ~~~~~EAm~~G~PvI~s~~~~~~~e~v~~----~~~G~~~~~-d~~~l~~~i~~ll---~~~~~~~~~~~~~~~~~~~~~  467 (493)
                      |++.+|||+||+|+|+++.||.. |.+.+    +++|+++++ |+++++++|.+++   ++ ++.+.++++++   +++.
T Consensus       395 Gl~~lEAma~G~ppVv~~~GGl~-d~v~~~~~~~~~G~l~~~~d~~~la~ai~~~l~~~~~-~~~~~~~~~~~---~~~~  469 (489)
T PRK14098        395 GMLQMFAMSYGTIPVAYAGGGIV-ETIEEVSEDKGSGFIFHDYTPEALVAKLGEALALYHD-EERWEELVLEA---MERD  469 (489)
T ss_pred             hHHHHHHHhCCCCeEEecCCCCc-eeeecCCCCCCceeEeCCCCHHHHHHHHHHHHHHHcC-HHHHHHHHHHH---hcCC
Confidence            99999999999999999999998 66654    679999999 9999999999865   45 66677666554   4567


Q ss_pred             cCHHHHHHHHHHHHHHHhh
Q 039338          468 FTANKMALAYERLFLCIKN  486 (493)
Q Consensus       468 fs~~~~~~~~~~~~~~i~~  486 (493)
                      |||++++++|+++|+++++
T Consensus       470 fsw~~~a~~y~~lY~~~~~  488 (489)
T PRK14098        470 FSWKNSAEEYAQLYRELLG  488 (489)
T ss_pred             CChHHHHHHHHHHHHHHhc
Confidence            9999999999999998864

>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=1e-39  Score=323.54  Aligned_cols=360  Identities=19%  Similarity=0.183  Sum_probs=256.4

Q ss_pred             eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecC--CCCcc
Q 039338           84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEG--EADKW  161 (493)
Q Consensus        84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~  161 (493)
                      |||+++++.+    ..||+++++..|+++|+++||+|+++|.....  ......      ...+...++....  ....+
T Consensus         1 mkIl~~~~~~----~~gG~e~~~~~la~~L~~~G~~V~v~~~~~~~--~~~~~~------~~~~~~~i~~~~~~~~~~~~   68 (392)
T cd03805           1 LRVAFIHPDL----GIGGAERLVVDAALALQSRGHEVTIYTSHHDP--SHCFEE------TKDGTLPVRVRGDWLPRSIF   68 (392)
T ss_pred             CeEEEECCCC----CCchHHHHHHHHHHHHHhCCCeEEEEcCCCCc--hhcchh------ccCCeeEEEEEeEEEcchhh
Confidence            8999999865    67999999999999999999999999975432  111110      0111122222211  00111


Q ss_pred             ccc----cchHH----HH-HHhcCCCCcEEEeCccchhHHhhhcc--CcEEEEeccchhhhhhhhhhhhhhcCCCCccch
Q 039338          162 RYS----KGWEQ----FD-EENQREPFDVVHSESVALPHWLARNV--TNLAVSWHGIALESLQSGIFQDLTRKPLEPMSL  230 (493)
Q Consensus       162 ~~~----~~~~~----~~-~~~~~~~~DiI~~~~~~~~~~~~~~~--p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~  230 (493)
                      ...    ..+..    +. ......++|+||+++.....++....  .+++.+.|........          .     .
T Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvi~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~----------~-----~  133 (392)
T cd03805          69 GRFHILCAYLRMLYLALYLLLLPDEKYDVFIVDQVSACVPLLKLFSPSKILFYCHFPDQLLAQ----------R-----G  133 (392)
T ss_pred             HhHHHHHHHHHHHHHHHHHHhcccCCCCEEEEcCcchHHHHHHHhcCCcEEEEEecChHHhcC----------C-----C
Confidence            100    00111    11 12456799999998754333222211  2388888843211000          0     0


Q ss_pred             HhHhHHHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCC-CcEEEecCCccCCCccCCcccchhhhhhhCCCCC
Q 039338          231 AFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPS-ERVHVILNGINENEYGVDLSLGQSFRSRIGIPKN  309 (493)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~-~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~  309 (493)
                      .+...+.....+. .+...++.+|.++++|+..++.+.+.++... .++.+|+||+|.+.+.+.....  .++....+++
T Consensus       134 ~~~~~~~~~~~~~-~e~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~~~~vi~n~vd~~~~~~~~~~~--~~~~~~~~~~  210 (392)
T cd03805         134 SLLKRLYRKPFDW-LEEFTTGMADKIVVNSNFTASVFKKTFPSLAKNPREVVYPCVDTDSFESTSEDP--DPGLLIPKSG  210 (392)
T ss_pred             cHHHHHHHHHHHH-HHHHHhhCceEEEEcChhHHHHHHHHhcccccCCcceeCCCcCHHHcCcccccc--cccccccCCC
Confidence            0111122221121 2446788999999999999999988765333 3346999999998776543321  2222333344


Q ss_pred             CcEEEEEecccccccChHHHHHHHHHHHhhC---CCeEEEEEeCCCcH--------HHH----hh---hcCcEEEecCCC
Q 039338          310 ASLVLGVAGRLVKDKGHPLLHEAFSKLMVKY---PDVYLIVAGSGPWE--------QRY----KD---FGHQVLVMGSMS  371 (493)
Q Consensus       310 ~~~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~---~~~~l~i~G~g~~~--------~~~----~~---l~~~V~~~g~~~  371 (493)
                      . ++|+++||+.+.||++.+++++.++.++.   ++++|+++|+|+.+        +.+    ++   +.++|.|+|+++
T Consensus       211 ~-~~i~~~grl~~~Kg~~~ll~a~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~l~~~~~~~~~l~~~V~f~g~~~  289 (392)
T cd03805         211 K-KTFLSINRFERKKNIALAIEAFAILKDKLAEFKNVRLVIAGGYDPRVAENVEYLEELQRLAEELLLLEDQVIFLPSIS  289 (392)
T ss_pred             c-eEEEEEeeecccCChHHHHHHHHHHHhhcccccCeEEEEEcCCCCCCchhHHHHHHHHHHHHHhcCCCceEEEeCCCC
Confidence            4 78899999999999999999999998887   79999999987542        222    22   237899999999


Q ss_pred             HHHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCccceeeeCcceEEECCCHHHHHHHHHHHHHcCcH
Q 039338          372 PAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAPNVESLHKTLEAAVSEGPM  451 (493)
Q Consensus       372 ~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~~d~~~l~~~i~~ll~~~~~  451 (493)
                      .+++..+|+.||++++||. .|+||++++|||+||+|||+++.++.. |++.++.+|+++++|+++++++|.+++++ ++
T Consensus       290 ~~~~~~~l~~ad~~l~~s~-~E~~g~~~lEAma~G~PvI~s~~~~~~-e~i~~~~~g~~~~~~~~~~a~~i~~l~~~-~~  366 (392)
T cd03805         290 DSQKELLLSSARALLYTPS-NEHFGIVPLEAMYAGKPVIACNSGGPL-ETVVDGETGFLCEPTPEEFAEAMLKLAND-PD  366 (392)
T ss_pred             hHHHHHHHhhCeEEEECCC-cCCCCchHHHHHHcCCCEEEECCCCcH-HHhccCCceEEeCCCHHHHHHHHHHHHhC-hH
Confidence            9999999999999999996 599999999999999999999999988 88899899999987999999999999999 88


Q ss_pred             HHHHHHHHHHHHHHHhcCHHHHHHHH
Q 039338          452 RLAQRGEACRQYAASMFTANKMALAY  477 (493)
Q Consensus       452 ~~~~~~~~~~~~~~~~fs~~~~~~~~  477 (493)
                      .+++++++++++++++|+|+.+++++
T Consensus       367 ~~~~~~~~a~~~~~~~~s~~~~~~~~  392 (392)
T cd03805         367 LADRMGAAGRKRVKEKFSTEAFAERL  392 (392)
T ss_pred             HHHHHHHHHHHHHHHhcCHHHHhhhC
Confidence            99999999999999999999998764

ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.

>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=1.3e-39  Score=322.25  Aligned_cols=356  Identities=18%  Similarity=0.202  Sum_probs=249.8

Q ss_pred             EEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCC---Ccc
Q 039338           85 KIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEA---DKW  161 (493)
Q Consensus        85 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~  161 (493)
                      |||||+.+||.         ....|+++|.++||+|+++|.....  ....           +...+.+.....   ...
T Consensus         1 ~il~~~~~~p~---------~~~~la~~L~~~G~~v~~~~~~~~~--~~~~-----------~v~~~~~~~~~~~~~~~~   58 (396)
T cd03818           1 RILFVHQNFPG---------QFRHLAPALAAQGHEVVFLTEPNAA--PPPG-----------GVRVVRYRPPRGPTSGTH   58 (396)
T ss_pred             CEEEECCCCch---------hHHHHHHHHHHCCCEEEEEecCCCC--CCCC-----------CeeEEEecCCCCCCCCCC
Confidence            69999999974         2567999999999999999988765  1110           111111111100   011


Q ss_pred             ccc-----------cchHHHHHH-hcCCCCcEEEeCccchhHH-hhh---ccCcEEEEeccchhhhhhhhhhhhhhcCCC
Q 039338          162 RYS-----------KGWEQFDEE-NQREPFDVVHSESVALPHW-LAR---NVTNLAVSWHGIALESLQSGIFQDLTRKPL  225 (493)
Q Consensus       162 ~~~-----------~~~~~~~~~-~~~~~~DiI~~~~~~~~~~-~~~---~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~  225 (493)
                      .+.           .....+... .+..+||+||+|....... +..   ..| ++...|-+. .....+.    ...+.
T Consensus        59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdvi~~h~~~~~~~~l~~~~~~~~-~v~~~~~~~-~~~~~~~----~~~~~  132 (396)
T cd03818          59 PYLREFEEAVLRGQAVARALLALRAKGFRPDVIVAHPGWGETLFLKDVWPDAP-LIGYFEFYY-RAEGADV----GFDPE  132 (396)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCccchhhhHHHhCCCCC-EEEEEeeee-cCCCCCC----CCCCC
Confidence            111           111122222 2456899999997533222 222   234 555444211 1101110    00000


Q ss_pred             CccchHhHhHHHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhC
Q 039338          226 EPMSLAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIG  305 (493)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~  305 (493)
                      ......   ...+...+.......+..+|.++++|++.++.+.+.+   .+++.+|+||+|.+.|.+........+...+
T Consensus       133 ~~~~~~---~~~~~~~~~~~~~~~~~~ad~vi~~s~~~~~~~~~~~---~~ki~vI~ngvd~~~f~~~~~~~~~~~~~~~  206 (396)
T cd03818         133 FPPSLD---DALRLRNRNALILLALAQADAGVSPTRWQRSTFPAEL---RSRISVIHDGIDTDRLRPDPQARLRLPNGRV  206 (396)
T ss_pred             CCCchh---HHHHHHHhhhHhHHHHHhCCEEECCCHHHHhhCcHhh---ccceEEeCCCccccccCCCchhhhccccccc
Confidence            000000   0011111111122567899999999999999887754   3789999999999988765543322333333


Q ss_pred             CCCCCcEEEEEecc-cccccChHHHHHHHHHHHhhCCCeEEEEEeCCC------------cHH-HHhhh-----cCcEEE
Q 039338          306 IPKNASLVLGVAGR-LVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGP------------WEQ-RYKDF-----GHQVLV  366 (493)
Q Consensus       306 i~~~~~~~i~~~Gr-~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~------------~~~-~~~~l-----~~~V~~  366 (493)
                      ++.++ .+|+|+|| +.+.||++.+++|+..+.++.++++++|+|++.            +.+ ..+++     .++|.|
T Consensus       207 ~~~~~-~~i~~vgR~l~~~Kg~~~ll~a~~~l~~~~~~~~lvivG~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~V~f  285 (396)
T cd03818         207 LTPGD-EVITFVARNLEPYRGFHVFMRALPRLLRARPDARVVIVGGDGVSYGAPPPDGESWKQHMLDELGGRLDLSRVHF  285 (396)
T ss_pred             CCCCC-eEEEEECCCcccccCHHHHHHHHHHHHHHCCCcEEEEEcCCCcccCCCCCCcccHHHHHHHHhhcccCcceEEE
Confidence            44454 67889997 999999999999999999888999999999732            111 23333     268999


Q ss_pred             ecCCCHHHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCccceeeeCcceEEECC-CHHHHHHHHHHH
Q 039338          367 MGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAP-NVESLHKTLEAA  445 (493)
Q Consensus       367 ~g~~~~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~~-d~~~l~~~i~~l  445 (493)
                      +|+++++++.++|+.||++++||. +|++|++++|||+||+|||+++.++.. |++.++.+|+++++ |+++++++|.++
T Consensus       286 ~G~v~~~~~~~~l~~adv~v~~s~-~e~~~~~llEAmA~G~PVIas~~~g~~-e~i~~~~~G~lv~~~d~~~la~~i~~l  363 (396)
T cd03818         286 LGRVPYDQYLALLQVSDVHVYLTY-PFVLSWSLLEAMACGCLVVGSDTAPVR-EVITDGENGLLVDFFDPDALAAAVIEL  363 (396)
T ss_pred             eCCCCHHHHHHHHHhCcEEEEcCc-ccccchHHHHHHHCCCCEEEcCCCCch-hhcccCCceEEcCCCCHHHHHHHHHHH
Confidence            999999999999999999999995 699999999999999999999999998 89999999999998 999999999999


Q ss_pred             HHcCcHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Q 039338          446 VSEGPMRLAQRGEACRQYAASMFTANKMALAYE  478 (493)
Q Consensus       446 l~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~  478 (493)
                      +++ ++.+.+|++++++.++++|||+.++++|.
T Consensus       364 l~~-~~~~~~l~~~ar~~~~~~fs~~~~~~~~~  395 (396)
T cd03818         364 LDD-PARRARLRRAARRTALRYDLLSVCLPRQL  395 (396)
T ss_pred             HhC-HHHHHHHHHHHHHHHHHhccHHHHHHHHh
Confidence            999 89999999999999999999999999885

ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).

>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional

Probab=100.00  E-value=2.1e-39  Score=330.98  Aligned_cols=366  Identities=16%  Similarity=0.153  Sum_probs=256.2

Q ss_pred             CCCCce-EEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCC--------------EEEEEecCCCCCCCCCCccccCCCC
Q 039338           79 PSKFTL-KIAVFSRKWPISTTPGGMERHAHTLHVALARRGH--------------RVHIFTSPVDNINSPSISHQENDDG  143 (493)
Q Consensus        79 ~~~~~m-kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~--------------~V~v~~~~~~~~~~~~~~~~~~~~~  143 (493)
                      ++.++. ||+++....    ..||+|+++..|+.+|.+.++              +|.+++.....-.......      
T Consensus       276 ~~~~~~~rIl~vi~sl----~~GGAEr~~~~La~~l~~~~~~~~~~~g~g~~~~~~V~~~~~~~~~g~~~~~~~------  345 (694)
T PRK15179        276 GPESFVGPVLMINGSL----GAGGAERQFVNTAVALQSAIQQGQSIAGYGVLGPVQVVCRSLRSREGADFFAAT------  345 (694)
T ss_pred             CCCCCcceEEEEeCCC----CCCcHHHHHHHHHHHHHhcccCcccccCccCCCCcEEEEEecccccCcchHHHH------
Confidence            345566 899999865    779999999999999999854              4555433211100011110      


Q ss_pred             CCCCCCceEeecCCCCcc--------------------ccccchHHHHHHhcCCCCcEEEeCccch--hHHh---hhccC
Q 039338          144 SNNKYPLLHFHEGEADKW--------------------RYSKGWEQFDEENQREPFDVVHSESVAL--PHWL---ARNVT  198 (493)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~DiI~~~~~~~--~~~~---~~~~p  198 (493)
                      ....+..+..+.......                    ........+.+.+++.+|||||+|+...  ...+   ..++|
T Consensus       346 L~~~Gv~v~~l~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~L~~~lk~~kpDIVH~h~~~a~~lg~lAa~~~gvP  425 (694)
T PRK15179        346 LADAGIPVSVYSDMQAWGGCEFSSLLAPYREYLRFLPKQIIEGTTKLTDVMRSSVPSVVHIWQDGSIFACALAALLAGVP  425 (694)
T ss_pred             HHhCCCeEEEeccCCccCcccccccchhhHHHhhhcchhHHHHHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHHcCCC
Confidence            111122222222111100                    0112345667777888999999997521  1122   23457


Q ss_pred             cEEEEeccchhhhhhhhhhhhhhcCCCCccchHhHhHHHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcE
Q 039338          199 NLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERV  278 (493)
Q Consensus       199 ~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v  278 (493)
                      .++.+.|+...... ..               .+ ...+..+.+.+    .....+.+++.|+..++.+.+.++++.+++
T Consensus       426 vIv~t~h~~~~~~~-~~---------------~~-~~~~~~l~~~l----~~~~~~i~Vs~S~~~~~~l~~~~g~~~~kI  484 (694)
T PRK15179        426 RIVLSVRTMPPVDR-PD---------------RY-RVEYDIIYSEL----LKMRGVALSSNSQFAAHRYADWLGVDERRI  484 (694)
T ss_pred             EEEEEeCCCccccc-hh---------------HH-HHHHHHHHHHH----HhcCCeEEEeCcHHHHHHHHHHcCCChhHE
Confidence            33446676432100 00               00 01111111111    112345677778888888887788888999


Q ss_pred             EEecCCccCCCccCCcccchhhhhh--hCCCCCCcEEEEEecccccccChHHHHHHHHHHHhhCCCeEEEEEeCCCcHHH
Q 039338          279 HVILNGINENEYGVDLSLGQSFRSR--IGIPKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQR  356 (493)
Q Consensus       279 ~vi~ngvd~~~~~~~~~~~~~~r~~--~~i~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~  356 (493)
                      .|||||+|...|.+.+.... .+..  ...+++ .++|+++||+.+.||++.+++|+.++.++.++++|+|+|+|+..+.
T Consensus       485 ~VI~NGVd~~~f~~~~~~~~-~~~~~~~~~~~~-~~vIg~VGRL~~~KG~~~LI~A~a~l~~~~p~~~LvIvG~G~~~~~  562 (694)
T PRK15179        485 PVVYNGLAPLKSVQDDACTA-MMAQFDARTSDA-RFTVGTVMRVDDNKRPFLWVEAAQRFAASHPKVRFIMVGGGPLLES  562 (694)
T ss_pred             EEECCCcCHHhcCCCchhhH-HHHhhccccCCC-CeEEEEEEeCCccCCHHHHHHHHHHHHHHCcCeEEEEEccCcchHH
Confidence            99999999887764332211 1111  122333 3789999999999999999999999988889999999999987766


Q ss_pred             Hhhh------cCcEEEecCCCHHHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCccceeeeCcceEE
Q 039338          357 YKDF------GHQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFM  430 (493)
Q Consensus       357 ~~~l------~~~V~~~g~~~~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~  430 (493)
                      ++++      .++|.|.|+.  +++..+|+.+|++|+||. .||||++++|||+||+|||+|+.||.+ |++.++.+|++
T Consensus       563 L~~l~~~lgL~~~V~flG~~--~dv~~ll~aaDv~VlpS~-~Egfp~vlLEAMA~G~PVVat~~gG~~-EiV~dg~~GlL  638 (694)
T PRK15179        563 VREFAQRLGMGERILFTGLS--RRVGYWLTQFNAFLLLSR-FEGLPNVLIEAQFSGVPVVTTLAGGAG-EAVQEGVTGLT  638 (694)
T ss_pred             HHHHHHHcCCCCcEEEcCCc--chHHHHHHhcCEEEeccc-cccchHHHHHHHHcCCeEEEECCCChH-HHccCCCCEEE
Confidence            6543      2889999997  589999999999999996 599999999999999999999999998 99999999999


Q ss_pred             ECC-C--HHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 039338          431 FAP-N--VESLHKTLEAAVSEGPMRLAQRGEACRQYAASMFTANKMALAYERLFL  482 (493)
Q Consensus       431 ~~~-d--~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~  482 (493)
                      +++ |  +++++++|.+++.+ ......+++++++++.++|||+.+++++.++|+
T Consensus       639 v~~~d~~~~~La~aL~~ll~~-l~~~~~l~~~ar~~a~~~FS~~~~~~~~~~lY~  692 (694)
T PRK15179        639 LPADTVTAPDVAEALARIHDM-CAADPGIARKAADWASARFSLNQMIASTVRCYQ  692 (694)
T ss_pred             eCCCCCChHHHHHHHHHHHhC-hhccHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence            986 5  46999999998887 555678889999999989999999999999995

>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=4.4e-39  Score=319.72  Aligned_cols=351  Identities=23%  Similarity=0.278  Sum_probs=255.8

Q ss_pred             CCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCCCc-------ccc-ccchHH
Q 039338           98 TPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEADK-------WRY-SKGWEQ  169 (493)
Q Consensus        98 ~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~-~~~~~~  169 (493)
                      ..||+++++.+|+++|+++||+|+|++.....  ......      .......+......+..       +.. ......
T Consensus        19 ~~GG~~~~~~~l~~~L~~~g~~V~v~~~~~~~--~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (398)
T cd03800          19 DTGGQNVYVLELARALARLGHEVDIFTRRIDD--ALPPIV------ELAPGVRVVRVPAGPAEYLPKEELWPYLDEFADD   90 (398)
T ss_pred             CCCceeehHHHHHHHHhccCceEEEEEecCCc--ccCCcc------ccccceEEEecccccccCCChhhcchhHHHHHHH
Confidence            57999999999999999999999999975544  111100      00111112111111100       000 112233


Q ss_pred             HHHHhcCC--CCcEEEeCccc--hhHH---hhhccCcEEEEeccchhhhhhhhhhhhhhcCCCCccchHhHhHHHHHHHH
Q 039338          170 FDEENQRE--PFDVVHSESVA--LPHW---LARNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQGVMLK  242 (493)
Q Consensus       170 ~~~~~~~~--~~DiI~~~~~~--~~~~---~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (493)
                      +.+.++..  +||+||+|...  ....   ...++| ++.+.|+........     ..   .        ........+
T Consensus        91 ~~~~~~~~~~~~Div~~~~~~~~~~~~~~~~~~~~~-~i~~~h~~~~~~~~~-----~~---~--------~~~~~~~~~  153 (398)
T cd03800          91 LLRFLRREGGRPDLIHAHYWDSGLVALLLARRLGIP-LVHTFHSLGAVKRRH-----LG---A--------ADTYEPARR  153 (398)
T ss_pred             HHHHHHhcCCCccEEEEecCccchHHHHHHhhcCCc-eEEEeecccccCCcc-----cc---c--------ccccchhhh
Confidence            44444455  99999998642  1111   123456 888999754221100     00   0        000011112


Q ss_pred             HHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCCCCCCcEEEEEeccccc
Q 039338          243 VLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVAGRLVK  322 (493)
Q Consensus       243 ~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Gr~~~  322 (493)
                      ...+...++.+|.++++|+...+.+.+.++.+..++.+|+||+|.+.+.+.... ...++.++.+.++ ++|+|+||+.+
T Consensus       154 ~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~~~~vi~ng~~~~~~~~~~~~-~~~~~~~~~~~~~-~~i~~~gr~~~  231 (398)
T cd03800         154 IEAEERLLRAADRVIASTPQEAEELYSLYGAYPRRIRVVPPGVDLERFTPYGRA-EARRARLLRDPDK-PRILAVGRLDP  231 (398)
T ss_pred             hhHHHHHHhhCCEEEEcCHHHHHHHHHHccccccccEEECCCCCccceecccch-hhHHHhhccCCCC-cEEEEEccccc
Confidence            223446788999999999999999988776666679999999999877654332 1224555555555 78889999999


Q ss_pred             ccChHHHHHHHHHHHhhCCCeEEEEEeCCCcHH----------HHhhh--cCcEEEecCCCHHHHHHHHHHcCEEEeCCC
Q 039338          323 DKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQ----------RYKDF--GHQVLVMGSMSPAELRAFYNAIDIFVNPTL  390 (493)
Q Consensus       323 ~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~----------~~~~l--~~~V~~~g~~~~~~~~~~~~~adv~v~ps~  390 (493)
                      .||++.+++++..+.++.++++++++|++....          ..+++  .++|.|+|+++.+++.++|+.||++++||.
T Consensus       232 ~k~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~adi~l~ps~  311 (398)
T cd03800         232 RKGIDTLIRAYAELPELRERANLVIVGGPRDDILAMDEEELRELARELGVIDRVDFPGRVSREDLPALYRAADVFVNPAL  311 (398)
T ss_pred             ccCHHHHHHHHHHHHHhCCCeEEEEEECCCCcchhhhhHHHHHHHHhcCCCceEEEeccCCHHHHHHHHHhCCEEEeccc
Confidence            999999999999999888899999999875421          11222  378999999999999999999999999996


Q ss_pred             CCCCCChHHHHHHHcCCcEEecCCCCCccceeeeCcceEEECC-CHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHhcC
Q 039338          391 RPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAP-NVESLHKTLEAAVSEGPMRLAQRGEACRQYAASMFT  469 (493)
Q Consensus       391 ~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~~-d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs  469 (493)
                      . |++|++++|||++|+|||+++.++.. +++.++++|+++++ |+++++++|.+++++ ++.++++++++++.++++||
T Consensus       312 ~-e~~~~~l~Ea~a~G~Pvi~s~~~~~~-e~i~~~~~g~~~~~~~~~~l~~~i~~l~~~-~~~~~~~~~~a~~~~~~~~s  388 (398)
T cd03800         312 Y-EPFGLTALEAMACGLPVVATAVGGPR-DIVVDGVTGLLVDPRDPEALAAALRRLLTD-PALRRRLSRAGLRRARARYT  388 (398)
T ss_pred             c-cccCcHHHHHHhcCCCEEECCCCCHH-HHccCCCCeEEeCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhCC
Confidence            4 99999999999999999999999988 88999999999998 999999999999999 89999999999999988899


Q ss_pred             HHHHHHHHH
Q 039338          470 ANKMALAYE  478 (493)
Q Consensus       470 ~~~~~~~~~  478 (493)
                      |+.++++|+
T Consensus       389 ~~~~~~~~~  397 (398)
T cd03800         389 WERVAARLL  397 (398)
T ss_pred             HHHHHHHHh
Confidence            999999886

The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.

>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant

Probab=100.00  E-value=1.9e-38  Score=328.99  Aligned_cols=395  Identities=16%  Similarity=0.133  Sum_probs=267.8

Q ss_pred             CCCCceEEEEEecc-CC--------CCCCCCchHHHHHHHHHHHHhCC--CEEEEEecCCCCCCC-C----CCcccc---
Q 039338           79 PSKFTLKIAVFSRK-WP--------ISTTPGGMERHAHTLHVALARRG--HRVHIFTSPVDNINS-P----SISHQE---  139 (493)
Q Consensus        79 ~~~~~mkIl~v~~~-~p--------~~~~~gG~~~~~~~l~~~L~~~G--~~V~v~~~~~~~~~~-~----~~~~~~---  139 (493)
                      ...++|.|++|+.+ .+        -....||...|+.+|+++|++.|  |+|+++|........ .    ..+...   
T Consensus       165 ~~~~~~~I~liS~HG~~~~~~~elg~~~DtGGq~vYV~ELAraLa~~~gv~~Vdl~TR~~~~~~~~~~y~~p~e~~~~~~  244 (1050)
T TIGR02468       165 QKEKKLYIVLISLHGLVRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSSPDVDWSYGEPTEMLTPRS  244 (1050)
T ss_pred             cccCceEEEEEccccCccccCcccCCCCCCCChHHHHHHHHHHHHhCCCCCEEEEEeCCcCccccccccCCccccccccc
Confidence            34578999999873 22        13567999999999999999998  899999987653100 0    000000   


Q ss_pred             -----CCCCCCCCCCceEeecCCCC-ccccccchHHH-------HHHh--------------cCCCCcEEEeCcc--chh
Q 039338          140 -----NDDGSNNKYPLLHFHEGEAD-KWRYSKGWEQF-------DEEN--------------QREPFDVVHSESV--ALP  190 (493)
Q Consensus       140 -----~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-------~~~~--------------~~~~~DiI~~~~~--~~~  190 (493)
                           .......+...+++...... .......|..+       ...+              ....||+||+|.+  +..
T Consensus       245 ~~~~~~~~~~~~g~rIvRip~GP~~~~l~Ke~L~~~l~ef~d~~l~~~~~~~~~~~~~~~~~~~~~pDvIHaHyw~sG~a  324 (1050)
T TIGR02468       245 SENDGDEMGESSGAYIIRIPFGPRDKYIPKEELWPYIPEFVDGALSHIVNMSKVLGEQIGSGHPVWPYVIHGHYADAGDS  324 (1050)
T ss_pred             cccccccccCCCCeEEEEeccCCCCCCcCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCEEEECcchHHHH
Confidence                 00001112222333322221 11111112111       1111              0124999999964  222


Q ss_pred             HHhh---hccCcEEEEeccchhhhhhhhhhhhhhcCCCCccchHhHhHHHHHHHHHHHHHHhhccCCeEEEcChhHHHHH
Q 039338          191 HWLA---RNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEML  267 (493)
Q Consensus       191 ~~~~---~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~  267 (493)
                      ++..   .++| +|.|.|...-..........  .......     ...+....+...|...+..||.||+.|....+.+
T Consensus       325 a~~L~~~lgVP-~V~T~HSLgr~K~~~ll~~g--~~~~~~~-----~~~y~~~~Ri~~Ee~~l~~Ad~VIasT~qE~~eq  396 (1050)
T TIGR02468       325 AALLSGALNVP-MVLTGHSLGRDKLEQLLKQG--RMSKEEI-----NSTYKIMRRIEAEELSLDASEIVITSTRQEIEEQ  396 (1050)
T ss_pred             HHHHHHhhCCC-EEEECccchhhhhhhhcccc--ccccccc-----ccccchHHHHHHHHHHHHhcCEEEEeCHHHHHHH
Confidence            2222   3568 99999975311100000000  0000000     0112223344456678999999999999999876


Q ss_pred             HHHhC----------------------CCCCcEEEecCCccCCCccCCcccch-------------------hhhhhhCC
Q 039338          268 RDVYQ----------------------IPSERVHVILNGINENEYGVDLSLGQ-------------------SFRSRIGI  306 (493)
Q Consensus       268 ~~~~~----------------------~~~~~v~vi~ngvd~~~~~~~~~~~~-------------------~~r~~~~i  306 (493)
                      ...|+                      ....++.|||||+|.+.|.+......                   .++ .+..
T Consensus       397 ~~lY~~~~~~~~~~~~~~~~~gv~~~g~~~~ri~VIPpGVD~~~F~P~~~~~~~~~~~~~~~~~~~~~~~~~~l~-r~~~  475 (1050)
T TIGR02468       397 WGLYDGFDVILERKLRARARRGVSCYGRFMPRMAVIPPGMEFSHIVPHDGDMDGETEGNEEHPAKPDPPIWSEIM-RFFT  475 (1050)
T ss_pred             HHHhccCCchhhhhhhhhhcccccccccCCCCeEEeCCCCcHHHccCCCccccchhcccccccccccchhhHHHH-hhcc
Confidence            56553                      12348999999999999987432110                   111 2223


Q ss_pred             CCCCcEEEEEecccccccChHHHHHHHHHHHhh--CCCeEEEEEeCCCcHH-----------HHh----hh--cCcEEEe
Q 039338          307 PKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVK--YPDVYLIVAGSGPWEQ-----------RYK----DF--GHQVLVM  367 (493)
Q Consensus       307 ~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~--~~~~~l~i~G~g~~~~-----------~~~----~l--~~~V~~~  367 (493)
                      ++++ .+|+++||+.+.||++.+++|+..+.+.  .+++. +|+|+++..+           .+.    ++  .++|.|.
T Consensus       476 ~pdk-pvIL~VGRL~p~KGi~~LIeAf~~L~~l~~~~nL~-LIiG~gdd~d~l~~~~~~~l~~L~~li~~lgL~g~V~Fl  553 (1050)
T TIGR02468       476 NPRK-PMILALARPDPKKNITTLVKAFGECRPLRELANLT-LIMGNRDDIDEMSSGSSSVLTSVLKLIDKYDLYGQVAYP  553 (1050)
T ss_pred             cCCC-cEEEEEcCCccccCHHHHHHHHHHhHhhccCCCEE-EEEecCchhhhhhccchHHHHHHHHHHHHhCCCCeEEec
Confidence            4444 6788999999999999999999999753  24665 4668764321           111    22  3889999


Q ss_pred             cCCCHHHHHHHHHHc----CEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCccceeeeCcceEEECC-CHHHHHHHH
Q 039338          368 GSMSPAELRAFYNAI----DIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAP-NVESLHKTL  442 (493)
Q Consensus       368 g~~~~~~~~~~~~~a----dv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~~-d~~~l~~~i  442 (493)
                      |+++++++.++|+.|    |++|+||.+ |+||++++|||+||+|||+|+.||.+ |++.++.+|+++++ |+++|+++|
T Consensus       554 G~v~~edvp~lYr~Ad~s~DVFV~PS~~-EgFGLvlLEAMAcGlPVVASdvGG~~-EII~~g~nGlLVdP~D~eaLA~AL  631 (1050)
T TIGR02468       554 KHHKQSDVPDIYRLAAKTKGVFINPAFI-EPFGLTLIEAAAHGLPMVATKNGGPV-DIHRVLDNGLLVDPHDQQAIADAL  631 (1050)
T ss_pred             CCCCHHHHHHHHHHhhhcCCeeeCCccc-CCCCHHHHHHHHhCCCEEEeCCCCcH-HHhccCCcEEEECCCCHHHHHHHH
Confidence            999999999999988    699999965 99999999999999999999999998 99999999999999 999999999


Q ss_pred             HHHHHcCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhcc
Q 039338          443 EAAVSEGPMRLAQRGEACRQYAASMFTANKMALAYERLFLCIKNET  488 (493)
Q Consensus       443 ~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~i~~~~  488 (493)
                      .+++++ ++.+++|++++++.+.. |+|+.++++|.+.+..+..++
T Consensus       632 ~~LL~D-pelr~~m~~~gr~~v~~-FSWe~ia~~yl~~i~~~~~~~  675 (1050)
T TIGR02468       632 LKLVAD-KQLWAECRQNGLKNIHL-FSWPEHCKTYLSRIASCRPRH  675 (1050)
T ss_pred             HHHhhC-HHHHHHHHHHHHHHHHH-CCHHHHHHHHHHHHHHHhccC
Confidence            999999 99999999999999875 999999999999999887654

Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.

>PRK10125 putative glycosyl transferase; Provisional

Probab=100.00  E-value=6.8e-39  Score=314.39  Aligned_cols=371  Identities=15%  Similarity=0.122  Sum_probs=241.9

Q ss_pred             eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCC-C---CCCceEeecCCCC
Q 039338           84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSN-N---KYPLLHFHEGEAD  159 (493)
Q Consensus        84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~  159 (493)
                      ||||+|...+    ..||+|+.+..|++.|.++||+|.++......  ....+..+.+.... .   .....+.......
T Consensus         1 mkil~i~~~l----~~GGaeri~~~L~~~l~~~G~~~~i~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (405)
T PRK10125          1 MNILQFNVRL----AEGGAAGVALDLHQRALQQGLASHFVYGYGKG--GKESVSHQNYPQVIKHTPRMTAMANIALFRLF   74 (405)
T ss_pred             CeEEEEEeee----cCCchhHHHHHHHHHHHhcCCeEEEEEecCCC--cccccccCCcceEEEecccHHHHHHHHHHHhc
Confidence            8999999865    88999999999999999999999999987655  11111100000000 0   0000011000001


Q ss_pred             ccccccchHHHHHHh-cCCCCcEEEeCccc-----hhHH---------hhhccCcEEEEeccchhhhhhhhhhhhhh---
Q 039338          160 KWRYSKGWEQFDEEN-QREPFDVVHSESVA-----LPHW---------LARNVTNLAVSWHGIALESLQSGIFQDLT---  221 (493)
Q Consensus       160 ~~~~~~~~~~~~~~~-~~~~~DiI~~~~~~-----~~~~---------~~~~~p~~v~~~h~~~~~~~~~~~~~~~~---  221 (493)
                      ............+.+ ++.+|||||+|...     +...         ....+| +|+|+||.|....+..+.....   
T Consensus        75 ~~~~~~~~~~~~~~i~~~~~pDviHlH~~~~~~~~~~~l~~~~~~~~~~~~~~p-iV~TlHd~~~~tg~c~~~~~C~~~~  153 (405)
T PRK10125         75 NRDLFGNFNELYRTITRTPGPVVLHFHVLHSYWLNLKSVVRFCEKVKNHKPDVT-LVWTLHDHWSVTGRCAFTDGCEGWK  153 (405)
T ss_pred             chhhcchHHHHHHHHhhccCCCEEEEecccCceecHHHHHHHHhhhhcccCCCC-EEEecccccccCCCcCCCccccccc
Confidence            111223334444444 58899999999642     2111         112356 9999999987643322211110   


Q ss_pred             -cCCCCccc-------hHhHhHHHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCC
Q 039338          222 -RKPLEPMS-------LAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVD  293 (493)
Q Consensus       222 -~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~  293 (493)
                       .....+..       ..........-.+..  ...++.++.++++|+++++.+.+.++  ..++.+|+||+|.+.+.+.
T Consensus       154 ~~c~~Cp~l~~~~~~~~d~~~~~~~~k~~~~--~~~~~~~~~iV~~S~~l~~~~~~~~~--~~~i~vI~NGid~~~~~~~  229 (405)
T PRK10125        154 TGCQKCPTLNNYPPVKVDRAHQLVAGKRQLF--REMLALGCQFISPSQHVADAFNSLYG--PGRCRIINNGIDMATEAIL  229 (405)
T ss_pred             ccCCCCCCccCCCCCccchHHHHHHHHHHHH--HHHhhcCcEEEEcCHHHHHHHHHHcC--CCCEEEeCCCcCccccccc
Confidence             01111100       000111111111111  13345678999999999999887654  4789999999997533221


Q ss_pred             cccchhhhhhhCCCCCCcEEEEEeccc--ccccChHHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhhhcCcEEEecCC-
Q 039338          294 LSLGQSFRSRIGIPKNASLVLGVAGRL--VKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDFGHQVLVMGSM-  370 (493)
Q Consensus       294 ~~~~~~~r~~~~i~~~~~~~i~~~Gr~--~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~l~~~V~~~g~~-  370 (493)
                      +.. ...+    .+.++ .+|+++|+.  .+.||++.+++|+..+.   ++++|+++|+|+..     ..++|.++|+. 
T Consensus       230 ~~~-~~~~----~~~~~-~~il~v~~~~~~~~Kg~~~li~A~~~l~---~~~~L~ivG~g~~~-----~~~~v~~~g~~~  295 (405)
T PRK10125        230 AEL-PPVR----ETQGK-PKIAVVAHDLRYDGKTDQQLVREMMALG---DKIELHTFGKFSPF-----TAGNVVNHGFET  295 (405)
T ss_pred             ccc-cccc----cCCCC-CEEEEEEeccccCCccHHHHHHHHHhCC---CCeEEEEEcCCCcc-----cccceEEecCcC
Confidence            110 0011    12233 578899984  36899999999999874   47999999987532     13678999987 


Q ss_pred             CHHHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCccceeeeCcceEEECC-CHHHHHHHHHHHHHcC
Q 039338          371 SPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAP-NVESLHKTLEAAVSEG  449 (493)
Q Consensus       371 ~~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~~-d~~~l~~~i~~ll~~~  449 (493)
                      +.+++.++|++||++|+||. .||||++++|||+||+|||+|+.||++ |++.++ +|+++++ |+++|++.+...+.+ 
T Consensus       296 ~~~~l~~~y~~aDvfV~pS~-~Egfp~vilEAmA~G~PVVat~~gG~~-Eiv~~~-~G~lv~~~d~~~La~~~~~~~~~-  371 (405)
T PRK10125        296 DKRKLMSALNQMDALVFSSR-VDNYPLILCEALSIGVPVIATHSDAAR-EVLQKS-GGKTVSEEEVLQLAQLSKPEIAQ-  371 (405)
T ss_pred             CHHHHHHHHHhCCEEEECCc-cccCcCHHHHHHHcCCCEEEeCCCChH-HhEeCC-cEEEECCCCHHHHHhccCHHHHH-
Confidence            56889999999999999997 499999999999999999999999998 877664 9999999 999999864322211 


Q ss_pred             cHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Q 039338          450 PMRLAQRGEACRQYAASMFTANKMALAYERLFLCI  484 (493)
Q Consensus       450 ~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~i  484 (493)
                      . ....+.+++++.+.+.||++.++++|+++|+++
T Consensus       372 ~-~~~~~~~~~r~~~~~~fs~~~~~~~y~~lY~~l  405 (405)
T PRK10125        372 A-VFGTTLAEFSQRSRAAYSGQQMLEEYVNFYQNL  405 (405)
T ss_pred             H-hhhhHHHHHHHHHHHhCCHHHHHHHHHHHHHhC
Confidence            0 011133568888888899999999999999864

>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli

Probab=100.00  E-value=1.5e-38  Score=311.39  Aligned_cols=347  Identities=21%  Similarity=0.309  Sum_probs=262.1

Q ss_pred             EEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCCCccccc
Q 039338           85 KIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEADKWRYS  164 (493)
Q Consensus        85 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (493)
                      ||++++..+    ..||+++.+.+++++|.++||+|++++.....  ......         ..................
T Consensus         1 ~il~~~~~~----~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~--~~~~~~---------~~~~~~~~~~~~~~~~~~   65 (360)
T cd04951           1 KILYVITGL----GLGGAEKQVVDLADQFVAKGHQVAIISLTGES--EVKPPI---------DATIILNLNMSKNPLSFL   65 (360)
T ss_pred             CeEEEecCC----CCCCHHHHHHHHHHhcccCCceEEEEEEeCCC--Cccchh---------hccceEEecccccchhhH
Confidence            588888765    67999999999999999999999999875543  111000         001111111111122233


Q ss_pred             cchHHHHHHhcCCCCcEEEeCccch--hHHhhh---ccCcEEEEeccchhhhhhhhhhhhhhcCCCCccchHhHhHHHHH
Q 039338          165 KGWEQFDEENQREPFDVVHSESVAL--PHWLAR---NVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQGV  239 (493)
Q Consensus       165 ~~~~~~~~~~~~~~~DiI~~~~~~~--~~~~~~---~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (493)
                      ..+..+.+.+++.+||+||+|....  ...+.+   ..++++.+.|+....                       ......
T Consensus        66 ~~~~~~~~~~~~~~pdiv~~~~~~~~~~~~l~~~~~~~~~~v~~~h~~~~~-----------------------~~~~~~  122 (360)
T cd04951          66 LALWKLRKILRQFKPDVVHAHMFHANIFARLLRLFLPSPPLICTAHSKNEG-----------------------GRLRML  122 (360)
T ss_pred             HHHHHHHHHHHhcCCCEEEEcccchHHHHHHHHhhCCCCcEEEEeeccCch-----------------------hHHHHH
Confidence            3344566667788999999987532  121111   123388888875311                       011111


Q ss_pred             HHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCCCCCCcEEEEEecc
Q 039338          240 MLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVAGR  319 (493)
Q Consensus       240 ~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Gr  319 (493)
                      +.+     .....++.++++|+...+.+.+..+++.+++.++|||+|...+.+.......+++++++++++ ++++++|+
T Consensus       123 ~~~-----~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~i~ng~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~g~  196 (360)
T cd04951         123 AYR-----LTDFLSDLTTNVSKEALDYFIASKAFNANKSFVVYNGIDTDRFRKDPARRLKIRNALGVKNDT-FVILAVGR  196 (360)
T ss_pred             HHH-----HHhhccCceEEEcHHHHHHHHhccCCCcccEEEEccccchhhcCcchHHHHHHHHHcCcCCCC-EEEEEEee
Confidence            111     122346778899999999998866677889999999999888776655556678888887766 78889999


Q ss_pred             cccccChHHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhh----hc--CcEEEecCCCHHHHHHHHHHcCEEEeCCCCCC
Q 039338          320 LVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKD----FG--HQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQ  393 (493)
Q Consensus       320 ~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~----l~--~~V~~~g~~~~~~~~~~~~~adv~v~ps~~~e  393 (493)
                      +.+.||++.+++++.++.++.++++|+++|+|+..+.+++    ++  ++|.|+|++  +++.++|+.||++++||.. |
T Consensus       197 ~~~~kg~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~v~~~g~~--~~~~~~~~~ad~~v~~s~~-e  273 (360)
T cd04951         197 LVEAKDYPNLLKAFAKLLSDYLDIKLLIAGDGPLRATLERLIKALGLSNRVKLLGLR--DDIAAYYNAADLFVLSSAW-E  273 (360)
T ss_pred             CchhcCcHHHHHHHHHHHhhCCCeEEEEEcCCCcHHHHHHHHHhcCCCCcEEEeccc--ccHHHHHHhhceEEecccc-c
Confidence            9999999999999999998888999999999987665544    22  689999987  6899999999999999965 9


Q ss_pred             CCChHHHHHHHcCCcEEecCCCCCccceeeeCcceEEECC-CHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHhcCHHH
Q 039338          394 GLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAP-NVESLHKTLEAAVSEGPMRLAQRGEACRQYAASMFTANK  472 (493)
Q Consensus       394 g~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~~-d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~  472 (493)
                      |+|++++|||++|+|||+++.++.. |++.+  +|+++++ |+++++++|.++++++++.+..++++ ++.+.+.|||+.
T Consensus       274 ~~~~~~~Ea~a~G~PvI~~~~~~~~-e~i~~--~g~~~~~~~~~~~~~~i~~ll~~~~~~~~~~~~~-~~~~~~~~s~~~  349 (360)
T cd04951         274 GFGLVVAEAMACELPVVATDAGGVR-EVVGD--SGLIVPISDPEALANKIDEILKMSGEERDIIGAR-RERIVKKFSINS  349 (360)
T ss_pred             CCChHHHHHHHcCCCEEEecCCChh-hEecC--CceEeCCCCHHHHHHHHHHHHhCCHHHHHHHHHH-HHHHHHhcCHHH
Confidence            9999999999999999999999988 77765  7889988 99999999999997646666667666 888888899999


Q ss_pred             HHHHHHHHHH
Q 039338          473 MALAYERLFL  482 (493)
Q Consensus       473 ~~~~~~~~~~  482 (493)
                      ++++|.++|+
T Consensus       350 ~~~~~~~~y~  359 (360)
T cd04951         350 IVQQWLTLYT  359 (360)
T ss_pred             HHHHHHHHhh
Confidence            9999999996

In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have

>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=5.5e-39  Score=313.99  Aligned_cols=329  Identities=23%  Similarity=0.341  Sum_probs=251.6

Q ss_pred             CCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCCCccccccchHHHHHHhcCC
Q 039338           98 TPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEADKWRYSKGWEQFDEENQRE  177 (493)
Q Consensus        98 ~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (493)
                      ..||+++++.+++++|+++||+|++++.....  ....+.        .+...+.........+........+.+.+++.
T Consensus         8 ~~gG~e~~~~~l~~~L~~~g~~v~v~~~~~~~--~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~   77 (355)
T cd03819           8 ESGGVERGTLELARALVERGHRSLVASAGGRL--VAELEA--------EGSRHIKLPFISKNPLRILLNVARLRRLIREE   77 (355)
T ss_pred             ccCcHHHHHHHHHHHHHHcCCEEEEEcCCCch--HHHHHh--------cCCeEEEccccccchhhhHHHHHHHHHHHHHc
Confidence            56999999999999999999999999865432  111100        11111111111112222233445566667788


Q ss_pred             CCcEEEeCccc--hhHH---hhhccCcEEEEeccchhhhhhhhhhhhhhcCCCCccchHhHhHHHHHHHHHHHHHHhhcc
Q 039338          178 PFDVVHSESVA--LPHW---LARNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQGVMLKVLNEIRFFNK  252 (493)
Q Consensus       178 ~~DiI~~~~~~--~~~~---~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (493)
                      +||+||+|+..  ....   ...++| ++.++|+......                           .     ...++.+
T Consensus        78 ~~dii~~~~~~~~~~~~~~~~~~~~~-~i~~~h~~~~~~~---------------------------~-----~~~~~~~  124 (355)
T cd03819          78 KVDIVHARSRAPAWSAYLAARRTRPP-FVTTVHGFYSVNF---------------------------R-----YNAIMAR  124 (355)
T ss_pred             CCCEEEECCCchhHHHHHHHHhcCCC-EEEEeCCchhhHH---------------------------H-----HHHHHHh
Confidence            99999998742  1111   123456 8999998643210                           0     1134568


Q ss_pred             CCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccc---hhhhhhhCCCCCCcEEEEEecccccccChHHH
Q 039338          253 YAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLG---QSFRSRIGIPKNASLVLGVAGRLVKDKGHPLL  329 (493)
Q Consensus       253 ~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~---~~~r~~~~i~~~~~~~i~~~Gr~~~~Kg~~~l  329 (493)
                      +|.++++|+...+.+.+.++++.+++.+||||+|.+.+.+.....   ..++++++.+++. ++++++||+.+.||++.+
T Consensus       125 ~~~vi~~s~~~~~~~~~~~~~~~~k~~~i~ngi~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~Gr~~~~Kg~~~l  203 (355)
T cd03819         125 GDRVIAVSNFIADHIRENYGVDPDRIRVIPRGVDLDRFDPGAVPPERILALAREWPLPKGK-PVILLPGRLTRWKGQEVF  203 (355)
T ss_pred             cCEEEEeCHHHHHHHHHhcCCChhhEEEecCCccccccCccccchHHHHHHHHHcCCCCCc-eEEEEeeccccccCHHHH
Confidence            999999999999999977888888999999999998876543321   1256677766665 788899999999999999


Q ss_pred             HHHHHHHHhhCCCeEEEEEeCCCcHHHH--------hh--hcCcEEEecCCCHHHHHHHHHHcCEEEeCCCCCCCCChHH
Q 039338          330 HEAFSKLMVKYPDVYLIVAGSGPWEQRY--------KD--FGHQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTL  399 (493)
Q Consensus       330 l~a~~~l~~~~~~~~l~i~G~g~~~~~~--------~~--l~~~V~~~g~~~~~~~~~~~~~adv~v~ps~~~eg~~~~~  399 (493)
                      ++++..+++.+++++++++|.++..+.+        .+  +.++|.|+|+  .+++.++|++||++++||.+.|++|+++
T Consensus       204 i~~~~~l~~~~~~~~l~ivG~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~l~~ad~~i~ps~~~e~~~~~l  281 (355)
T cd03819         204 IEALARLKKDDPDVHLLIVGDAQGRRFYYAELLELIKRLGLQDRVTFVGH--CSDMPAAYALADIVVSASTEPEAFGRTA  281 (355)
T ss_pred             HHHHHHHHhcCCCeEEEEEECCcccchHHHHHHHHHHHcCCcceEEEcCC--cccHHHHHHhCCEEEecCCCCCCCchHH
Confidence            9999999988789999999987654322        22  2378999999  4799999999999999995569999999


Q ss_pred             HHHHHcCCcEEecCCCCCccceeeeCcceEEECC-CHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHhcCHHHH
Q 039338          400 MEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAP-NVESLHKTLEAAVSEGPMRLAQRGEACRQYAASMFTANKM  473 (493)
Q Consensus       400 ~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~~-d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~  473 (493)
                      +|||++|+|||+++.++.. |++.++.+|+++++ |+++++++|..++..+++.+.++++++++.++++|+++.+
T Consensus       282 ~EA~a~G~PvI~~~~~~~~-e~i~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~a~~~~~~~f~~~~~  355 (355)
T cd03819         282 VEAQAMGRPVIASDHGGAR-ETVRPGETGLLVPPGDAEALAQALDQILSLLPEGRAKMFAKARMCVETLFSYDRM  355 (355)
T ss_pred             HHHHhcCCCEEEcCCCCcH-HHHhCCCceEEeCCCCHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhhhhccC
Confidence            9999999999999999987 88999889999998 9999999997776644899999999999999999999863

WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.

>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=3.2e-38  Score=309.70  Aligned_cols=348  Identities=22%  Similarity=0.261  Sum_probs=263.4

Q ss_pred             eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCCCcccc
Q 039338           84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEADKWRY  163 (493)
Q Consensus        84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (493)
                      |||++++..    ...||+++++..++++|.++||+|++++....                                   
T Consensus         1 MkIl~~~~~----~~~gG~~~~~~~l~~~l~~~G~~v~v~~~~~~-----------------------------------   41 (365)
T cd03825           1 MKVLHLNTS----DISGGAARAAYRLHRALQAAGVDSTMLVQEKK-----------------------------------   41 (365)
T ss_pred             CeEEEEecC----CCCCcHHHHHHHHHHHHHhcCCceeEEEeecc-----------------------------------
Confidence            899999874    26699999999999999999999999986432                                   


Q ss_pred             ccchHHHHHHhcCCCCcEEEeCccc-----hhHHhh--hccCcEEEEeccchhhhhhhhhhhhhh---cCC-CCccchHh
Q 039338          164 SKGWEQFDEENQREPFDVVHSESVA-----LPHWLA--RNVTNLAVSWHGIALESLQSGIFQDLT---RKP-LEPMSLAF  232 (493)
Q Consensus       164 ~~~~~~~~~~~~~~~~DiI~~~~~~-----~~~~~~--~~~p~~v~~~h~~~~~~~~~~~~~~~~---~~~-~~~~~~~~  232 (493)
                           .+.+.++..+||+||+|...     +..+..  +++| +++++|+.+.............   ... ..+.....
T Consensus        42 -----~~~~~~~~~~~diih~~~~~~~~~~~~~~~~~~~~~~-~v~~~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  115 (365)
T cd03825          42 -----ALISKIEIINADIVHLHWIHGGFLSIEDLSKLLDRKP-VVWTLHDMWPFTGGCHYPGGCDRYKTECGNCPQLGSY  115 (365)
T ss_pred             -----hhhhChhcccCCEEEEEccccCccCHHHHHHHHcCCC-EEEEcccCcccccccCCccccccccccCCCCCCCCCC
Confidence                 22233456789999998631     111111  2567 9999999765432211110000   000 00000000


Q ss_pred             Hh-HHHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCCCCCCc
Q 039338          233 NK-SLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNAS  311 (493)
Q Consensus       233 ~~-~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~  311 (493)
                      .. .+.....+... ..+...++.++++|++..+.+.+.++++..++.++|||+|.+.+.+..  ....++.++++.++ 
T Consensus       116 ~~~~~~~~~~~~~~-~~~~~~~~~~v~~s~~~~~~~~~~~~~~~~~~~vi~ngi~~~~~~~~~--~~~~~~~~~~~~~~-  191 (365)
T cd03825         116 PEKDLSRWIWRRKR-KAWADLNLTIVAPSRWLADCARSSSLFKGIPIEVIPNGIDTTIFRPRD--KREARKRLGLPADK-  191 (365)
T ss_pred             CcccHHHHHHHHHH-HHhccCCcEEEehhHHHHHHHHhccccCCCceEEeCCCCcccccCCCc--HHHHHHHhCCCCCC-
Confidence            00 11111111111 112256778999999999999887667788999999999998875433  34567788887776 


Q ss_pred             EEEEEeccccc--ccChHHHHHHHHHHHhh-CCCeEEEEEeCCCcHHHHhhhcCcEEEecCCC-HHHHHHHHHHcCEEEe
Q 039338          312 LVLGVAGRLVK--DKGHPLLHEAFSKLMVK-YPDVYLIVAGSGPWEQRYKDFGHQVLVMGSMS-PAELRAFYNAIDIFVN  387 (493)
Q Consensus       312 ~~i~~~Gr~~~--~Kg~~~ll~a~~~l~~~-~~~~~l~i~G~g~~~~~~~~l~~~V~~~g~~~-~~~~~~~~~~adv~v~  387 (493)
                      .++++.|+...  .||++.+++++..+.++ .++++++++|+++..... .+..+|.++|+++ ++++..+|+.||++++
T Consensus       192 ~~i~~~~~~~~~~~K~~~~ll~a~~~l~~~~~~~~~~~i~G~~~~~~~~-~~~~~v~~~g~~~~~~~~~~~~~~ad~~l~  270 (365)
T cd03825         192 KIILFGAVGGTDPRKGFDELIEALKRLAERWKDDIELVVFGASDPEIPP-DLPFPVHYLGSLNDDESLALIYSAADVFVV  270 (365)
T ss_pred             eEEEEEecCCCccccCHHHHHHHHHHhhhccCCCeEEEEeCCCchhhhc-cCCCceEecCCcCCHHHHHHHHHhCCEEEe
Confidence            55656666654  89999999999999875 578999999987654432 4568899999998 8899999999999999


Q ss_pred             CCCCCCCCChHHHHHHHcCCcEEecCCCCCccceeeeCcceEEECC-CHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHH
Q 039338          388 PTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAP-NVESLHKTLEAAVSEGPMRLAQRGEACRQYAAS  466 (493)
Q Consensus       388 ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~~-d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~  466 (493)
                      ||. .|++|++++|||++|+|||+++.++.. |++.++.+|++++. |++++++++.+++++ ++.+.++++++++.+++
T Consensus       271 ps~-~e~~g~~~~Eam~~g~PvI~~~~~~~~-e~~~~~~~g~~~~~~~~~~~~~~l~~l~~~-~~~~~~~~~~~~~~~~~  347 (365)
T cd03825         271 PSL-QENFPNTAIEALACGTPVVAFDVGGIP-DIVDHGVTGYLAKPGDPEDLAEGIEWLLAD-PDEREELGEAARELAEN  347 (365)
T ss_pred             ccc-cccccHHHHHHHhcCCCEEEecCCCCh-hheeCCCceEEeCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHH
Confidence            996 599999999999999999999999998 88888889999999 999999999999998 88899999999999999


Q ss_pred             hcCHHHHHHHHHHHHHHH
Q 039338          467 MFTANKMALAYERLFLCI  484 (493)
Q Consensus       467 ~fs~~~~~~~~~~~~~~i  484 (493)
                      +|||+.++++|.++|+++
T Consensus       348 ~~s~~~~~~~~~~~y~~~  365 (365)
T cd03825         348 EFDSRVQAKRYLSLYEEL  365 (365)
T ss_pred             hcCHHHHHHHHHHHHhhC
Confidence            999999999999999864

wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.

>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=5.7e-39  Score=325.65  Aligned_cols=386  Identities=20%  Similarity=0.229  Sum_probs=261.5

Q ss_pred             EEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCC----------------CCCCCCC
Q 039338           85 KIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQEND----------------DGSNNKY  148 (493)
Q Consensus        85 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~----------------~~~~~~~  148 (493)
                      ||++|+.++.|....||.+.++..|+++|++.||+|+|+++................                ......+
T Consensus         1 ~Il~v~~E~~p~~k~GGl~~~~~~L~~aL~~~G~~V~Vi~p~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g   80 (476)
T cd03791           1 KVLFVASEVAPFAKTGGLGDVVGALPKALAKLGHDVRVIMPKYGRILDELRGQLLVLRLFGVPVGGRPEYVGVFELPVDG   80 (476)
T ss_pred             CEEEEEccccccccCCcHHHHHHHHHHHHHHCCCeEEEEecCCcchhhHhccCeEEEEEEeeccCCceeEEEEEEEEeCC
Confidence            699999987666789999999999999999999999999987665222111100000                0001112


Q ss_pred             CceEeecCCC-----C-----ccccc-------cchHHHHHHhc--CCCCcEEEeCccc---hhHHhhh--------ccC
Q 039338          149 PLLHFHEGEA-----D-----KWRYS-------KGWEQFDEENQ--REPFDVVHSESVA---LPHWLAR--------NVT  198 (493)
Q Consensus       149 ~~~~~~~~~~-----~-----~~~~~-------~~~~~~~~~~~--~~~~DiI~~~~~~---~~~~~~~--------~~p  198 (493)
                      ..++++....     .     ...+.       .......+.+.  ..+|||||+|.+.   ++.++..        ..|
T Consensus        81 v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~l~~~~~~pDviH~hd~~t~~~~~~l~~~~~~~~~~~~~  160 (476)
T cd03791          81 VPVYFLDNPDYFDRPGLYDDSGYDYEDNAERFALFSRAALELLRRLGWKPDIIHCHDWHTGLVPALLKEKYADPFFKNIK  160 (476)
T ss_pred             ceEEEEcChHHcCCCCCCCccCCCCccHHHHHHHHHHHHHHHHHhcCCCCcEEEECchHHHHHHHHHHHhhccccCCCCC
Confidence            2222222111     0     00000       01112222232  4799999999752   2222222        345


Q ss_pred             cEEEEeccchhhhhhhhh-hhhhhcCCCCccchHhHhHHHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHH-------
Q 039338          199 NLAVSWHGIALESLQSGI-FQDLTRKPLEPMSLAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDV-------  270 (493)
Q Consensus       199 ~~v~~~h~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~-------  270 (493)
                       +++++|+..+....... ..... ....  . ...............++..+..+|.++++|+.+++.+.+.       
T Consensus       161 -~v~tiH~~~~~g~~~~~~~~~~~-~~~~--~-~~~~~~~~~~~~~~~~~~~~~~ad~v~~vS~~~~~~i~~~~~~~gl~  235 (476)
T cd03791         161 -TVFTIHNLAYQGVFPLEALEDLG-LPWE--E-LFHIDGLEFYGQVNFLKAGIVYADAVTTVSPTYAREILTPEFGEGLD  235 (476)
T ss_pred             -EEEEeCCCCCCCCCCHHHHHHcC-CCcc--c-hhhhcccccCCcccHHHHHHHhcCcCeecCHhHHHHhCCCCCCcchH
Confidence             99999997653311110 00000 0000  0 0000000000001112355778999999999999887641       


Q ss_pred             --hCCCCCcEEEecCCccCCCccCCccc-----------------chhhhhhhCCC-CCCcEEEEEecccccccChHHHH
Q 039338          271 --YQIPSERVHVILNGINENEYGVDLSL-----------------GQSFRSRIGIP-KNASLVLGVAGRLVKDKGHPLLH  330 (493)
Q Consensus       271 --~~~~~~~v~vi~ngvd~~~~~~~~~~-----------------~~~~r~~~~i~-~~~~~~i~~~Gr~~~~Kg~~~ll  330 (493)
                        +.....++.+|+||+|.+.|.+....                 +..+++++|++ .++.++|+++||+.++||++.++
T Consensus       236 ~~~~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~~~~~~~k~~l~~~~g~~~~~~~~~i~~vGrl~~~Kg~~~li  315 (476)
T cd03791         236 GLLRARAGKLSGILNGIDYDVWNPATDPHLPANYSADDLEGKAENKAALQEELGLPVDPDAPLFGFVGRLTEQKGIDLLL  315 (476)
T ss_pred             HHHHhccCCeEEEeCCCcCcccCccccchhhhcCCccccccHHHHHHHHHHHcCCCcCCCCCEEEEEeeccccccHHHHH
Confidence              22345799999999999988765432                 24578889986 33347889999999999999999


Q ss_pred             HHHHHHHhhCCCeEEEEEeCCCc--HHHHhhh----cCcEEEecCCCHHHHHHHHHHcCEEEeCCCCCCCCChHHHHHHH
Q 039338          331 EAFSKLMVKYPDVYLIVAGSGPW--EQRYKDF----GHQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMM  404 (493)
Q Consensus       331 ~a~~~l~~~~~~~~l~i~G~g~~--~~~~~~l----~~~V~~~g~~~~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~  404 (493)
                      +++..+.++  +++|+++|+|+.  .+.++++    .+++.+.+..+.+++..+|+.||++++||.+ |++|++++|||+
T Consensus       316 ~a~~~l~~~--~~~lvi~G~g~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~aDv~l~pS~~-E~~gl~~lEAma  392 (476)
T cd03791         316 EALPELLEL--GGQLVILGSGDPEYEEALRELAARYPGRVAVLIGYDEALAHLIYAGADFFLMPSRF-EPCGLTQMYAMR  392 (476)
T ss_pred             HHHHHHHHc--CcEEEEEecCCHHHHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhCCEEECCCCC-CCCcHHHHHHhh
Confidence            999999875  489999998853  2333333    3688877777778889999999999999965 999999999999


Q ss_pred             cCCcEEecCCCCCccceeeeCc------ceEEECC-CHHHHHHHHHHHHHc--CcHHHHHHHHHHHHHHHHhcCHHHHHH
Q 039338          405 SGKPVMASRFPSIKGTIVVDDE------FGFMFAP-NVESLHKTLEAAVSE--GPMRLAQRGEACRQYAASMFTANKMAL  475 (493)
Q Consensus       405 ~G~PvI~s~~~~~~~e~v~~~~------~G~~~~~-d~~~l~~~i~~ll~~--~~~~~~~~~~~~~~~~~~~fs~~~~~~  475 (493)
                      ||+|||+++.||++ |++.++.      +|+++++ |+++++++|.++++.  .++.+.++++++.   +..|||+.+++
T Consensus       393 ~G~pvI~~~~gg~~-e~v~~~~~~~~~~~G~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~---~~~fsw~~~a~  468 (476)
T cd03791         393 YGTVPIVRATGGLA-DTVIDYNEDTGEGTGFVFEGYNADALLAALRRALALYRDPEAWRKLQRNAM---AQDFSWDRSAK  468 (476)
T ss_pred             CCCCCEECcCCCcc-ceEeCCcCCCCCCCeEEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHHHHh---ccCCChHHHHH
Confidence            99999999999999 8888887      9999999 999999999998863  1566666666654   45699999999


Q ss_pred             HHHHHHH
Q 039338          476 AYERLFL  482 (493)
Q Consensus       476 ~~~~~~~  482 (493)
                      +|.++|+
T Consensus       469 ~~~~~y~  475 (476)
T cd03791         469 EYLELYR  475 (476)
T ss_pred             HHHHHHh
Confidence            9999996

Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.

>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=4.4e-38  Score=308.18  Aligned_cols=357  Identities=23%  Similarity=0.241  Sum_probs=267.4

Q ss_pred             EEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCCCccccc
Q 039338           85 KIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEADKWRYS  164 (493)
Q Consensus        85 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (493)
                      ||++++..|||  ..||++.++..|+++|.++||+|++++.....  ...... ...     ........ .........
T Consensus         1 kIl~i~~~~~p--~~~G~~~~~~~l~~~L~~~g~~v~~~~~~~~~--~~~~~~-~~~-----~~~~~~~~-~~~~~~~~~   69 (364)
T cd03814           1 RIAIVTDTFLP--QVNGVVRTLQRLVEHLRARGHEVLVIAPGPFR--ESEGPA-RVV-----PVPSVPLP-GYPEIRLAL   69 (364)
T ss_pred             CeEEEecccCc--cccceehHHHHHHHHHHHCCCEEEEEeCCchh--hccCCC-Cce-----eecccccC-cccceEecc
Confidence            69999999976  56999999999999999999999999987654  111100 000     00000000 000011112


Q ss_pred             cchHHHHHHhcCCCCcEEEeCccchhH------HhhhccCcEEEEeccchhhhhhhhhhhhhhcCCCCccchHhHhHHHH
Q 039338          165 KGWEQFDEENQREPFDVVHSESVALPH------WLARNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQG  238 (493)
Q Consensus       165 ~~~~~~~~~~~~~~~DiI~~~~~~~~~------~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (493)
                      .....+.+.+++.+||+||++......      ....++| ++..+|+.+........ .               .....
T Consensus        70 ~~~~~~~~~~~~~~pdii~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~~~~-~---------------~~~~~  132 (364)
T cd03814          70 PPRRRVRRLLDAFAPDVVHIATPGPLGLAALRAARRLGIP-VVTSYHTDFPEYLRYYG-L---------------GPLSW  132 (364)
T ss_pred             cchhhHHHHHHhcCCCEEEEeccchhhHHHHHHHHHcCCC-EEEEEecChHHHhhhcc-c---------------chHhH
Confidence            234455666668899999998643221      1223456 88899986442211100 0               01111


Q ss_pred             HHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCCCCCCcEEEEEec
Q 039338          239 VMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVAG  318 (493)
Q Consensus       239 ~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~G  318 (493)
                      .....  ...+++++|.++++|+...+.+.+ .  ...++.+++||+|.+.+.+.... ...+++++ + +++++++++|
T Consensus       133 ~~~~~--~~~~~~~~d~i~~~s~~~~~~~~~-~--~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~-~-~~~~~i~~~G  204 (364)
T cd03814         133 LAWAY--LRWFHNRADRVLVPSPSLADELRA-R--GFRRVRLWPRGVDTELFHPRRRD-EALRARLG-P-PDRPVLLYVG  204 (364)
T ss_pred             hhHHH--HHHHHHhCCEEEeCCHHHHHHHhc-c--CCCceeecCCCccccccCccccc-HHHHHHhC-C-CCCeEEEEEe
Confidence            11111  225678899999999999996654 2  34689999999999877654432 23445555 2 3347889999


Q ss_pred             ccccccChHHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhhhcCcEEEecCCCHHHHHHHHHHcCEEEeCCCCCCCCChH
Q 039338          319 RLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDFGHQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLT  398 (493)
Q Consensus       319 r~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~l~~~V~~~g~~~~~~~~~~~~~adv~v~ps~~~eg~~~~  398 (493)
                      ++.+.||++.+++++..+.++ ++++++++|+|+..+.++...++|.+.|+++.+++.++|+.||++++|+. .|++|++
T Consensus       205 ~~~~~k~~~~~i~~~~~l~~~-~~~~l~i~G~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~d~~l~~s~-~e~~~~~  282 (364)
T cd03814         205 RLAPEKNLEALLDADLPLRRR-PPVRLVIVGDGPARARLEARYPNVHFLGFLDGEELAAAYASADVFVFPSR-TETFGLV  282 (364)
T ss_pred             ccccccCHHHHHHHHHHhhhc-CCceEEEEeCCchHHHHhccCCcEEEEeccCHHHHHHHHHhCCEEEECcc-cccCCcH
Confidence            999999999999999999887 89999999999888777766689999999999999999999999999996 4999999


Q ss_pred             HHHHHHcCCcEEecCCCCCccceeeeCcceEEECC-CHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHhcCHHHHHHHH
Q 039338          399 LMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAP-NVESLHKTLEAAVSEGPMRLAQRGEACRQYAASMFTANKMALAY  477 (493)
Q Consensus       399 ~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~~-d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~  477 (493)
                      ++|||+||+|||+++.++.. +++.++++|+++++ |.++++++|.+++.+ ++.++++++++++.+ +.|+|+.+++++
T Consensus       283 ~lEa~a~g~PvI~~~~~~~~-~~i~~~~~g~~~~~~~~~~l~~~i~~l~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~  359 (364)
T cd03814         283 VLEAMASGLPVVAPDAGGPA-DIVTDGENGLLVEPGDAEAFAAALAALLAD-PELRRRMAARARAEA-ERRSWEAFLDNL  359 (364)
T ss_pred             HHHHHHcCCCEEEcCCCCch-hhhcCCcceEEcCCCCHHHHHHHHHHHHcC-HHHHHHHHHHHHHHH-hhcCHHHHHHHH
Confidence            99999999999999999988 88888899999999 999999999999999 899999999999999 559999999999


Q ss_pred             HHHHH
Q 039338          478 ERLFL  482 (493)
Q Consensus       478 ~~~~~  482 (493)
                      .++|+
T Consensus       360 ~~~~~  364 (364)
T cd03814         360 LEAYR  364 (364)
T ss_pred             HHhhC
Confidence            99874

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog

>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated

Probab=100.00  E-value=2.6e-38  Score=312.96  Aligned_cols=367  Identities=19%  Similarity=0.234  Sum_probs=258.3

Q ss_pred             EEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeec----------
Q 039338           86 IAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHE----------  155 (493)
Q Consensus        86 Il~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------  155 (493)
                      ||++++.+|.++..|| ...+++++++|++. |+|++++......+.........   .   ...+....          
T Consensus         1 iL~~~~~~P~P~~~G~-~~r~~~~~~~L~~~-~~v~l~~~~~~~~~~~~~~~l~~---~---~~~~~~~~~~~~~~~~~~   72 (397)
T TIGR03087         1 ILYLVHRIPYPPNKGD-KIRSFHLLRHLAAR-HRVHLGTFVDDPEDWQYAAALRP---L---CEEVCVVPLDPRVARLRS   72 (397)
T ss_pred             CeeecCCCCCCCCCCC-cEeHHHHHHHHHhc-CcEEEEEeCCCcccHHHHHHHHH---H---hheeEEeecCcHHHHHHH
Confidence            6899998887655555 77899999999886 99999998654311111110000   0   01111110          


Q ss_pred             ------CCCCc---cccccchHHHHHHhcCCCCcEEEeCccchhHHhh---hccCcEEEEeccchhhhhhhhhhhhhhcC
Q 039338          156 ------GEADK---WRYSKGWEQFDEENQREPFDVVHSESVALPHWLA---RNVTNLAVSWHGIALESLQSGIFQDLTRK  223 (493)
Q Consensus       156 ------~~~~~---~~~~~~~~~~~~~~~~~~~DiI~~~~~~~~~~~~---~~~p~~v~~~h~~~~~~~~~~~~~~~~~~  223 (493)
                            ..+..   +........+.+.+++.++|+||+++..+..++.   .++| .+++.|+.....+.     .....
T Consensus        73 ~~~l~~~~p~~~~~~~~~~~~~~l~~~~~~~~~D~v~~~~~~~~~~~~~~~~~~p-~i~~~~d~~~~~~~-----~~~~~  146 (397)
T TIGR03087        73 LLGLLTGEPLSLPYYRSRRLARWVNALLAAEPVDAIVVFSSAMAQYVTPHVRGVP-RIVDFVDVDSDKWL-----QYART  146 (397)
T ss_pred             HhhhcCCCCCcchhhCCHHHHHHHHHHHhhCCCCEEEEeccccceeccccccCCC-eEeehhhHHHHHHH-----HHHhc
Confidence                  01111   1112234556666778899999999765544443   3457 88899986432221     11110


Q ss_pred             CCCccchHhHhHHHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhh
Q 039338          224 PLEPMSLAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSR  303 (493)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~  303 (493)
                      ...+.. .. ......... ..|+..++++|.++++|+..++.+.+.++....++.+||||+|.+.|.+......     
T Consensus       147 ~~~~~~-~~-~~~~~~~~~-~~e~~~~~~ad~vi~~S~~~~~~l~~~~~~~~~~v~vipngvd~~~f~~~~~~~~-----  218 (397)
T TIGR03087       147 KRWPLR-WI-YRREGRLLL-AYERAIAARFDAATFVSRAEAELFRRLAPEAAGRITAFPNGVDADFFSPDRDYPN-----  218 (397)
T ss_pred             cCcchh-HH-HHHHHHHHH-HHHHHHHhhCCeEEEcCHHHHHHHHHhCCCCCCCeEEeecccchhhcCCCccccC-----
Confidence            010100 00 011011111 1355788999999999999999998765555678999999999988865432111     


Q ss_pred             hCCCCCCcEEEEEecccccccChHHHH----HHHHHHHhhCCCeEEEEEeCCCcHHHHhhhc--CcEEEecCCCHHHHHH
Q 039338          304 IGIPKNASLVLGVAGRLVKDKGHPLLH----EAFSKLMVKYPDVYLIVAGSGPWEQRYKDFG--HQVLVMGSMSPAELRA  377 (493)
Q Consensus       304 ~~i~~~~~~~i~~~Gr~~~~Kg~~~ll----~a~~~l~~~~~~~~l~i~G~g~~~~~~~~l~--~~V~~~g~~~~~~~~~  377 (493)
                       .++.++ .+++|+|++.+.||++.++    +++..+.++.|+++|+|+|+|+.. .++++.  ++|.|+|+++  ++..
T Consensus       219 -~~~~~~-~~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~~~p~~~l~ivG~g~~~-~~~~l~~~~~V~~~G~v~--~~~~  293 (397)
T TIGR03087       219 -PYPPGK-RVLVFTGAMDYWPNIDAVVWFAERVFPAVRARRPAAEFYIVGAKPSP-AVRALAALPGVTVTGSVA--DVRP  293 (397)
T ss_pred             -CCCCCC-cEEEEEEecCCccCHHHHHHHHHHHHHHHHHHCCCcEEEEECCCChH-HHHHhccCCCeEEeeecC--CHHH
Confidence             122233 5788999999999999887    566677777799999999998764 345543  7899999996  7899


Q ss_pred             HHHHcCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCccceeeeCcceEEECCCHHHHHHHHHHHHHcCcHHHHHHH
Q 039338          378 FYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAPNVESLHKTLEAAVSEGPMRLAQRG  457 (493)
Q Consensus       378 ~~~~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~~d~~~l~~~i~~ll~~~~~~~~~~~  457 (493)
                      +|+.||++|+||...||+|++++|||+||+|||+|+.++ . .+...+++|++++.|+++++++|.++++| ++.+++|+
T Consensus       294 ~~~~adv~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~-~-~i~~~~~~g~lv~~~~~~la~ai~~ll~~-~~~~~~~~  370 (397)
T TIGR03087       294 YLAHAAVAVAPLRIARGIQNKVLEAMAMAKPVVASPEAA-E-GIDALPGAELLVAADPADFAAAILALLAN-PAEREELG  370 (397)
T ss_pred             HHHhCCEEEecccccCCcccHHHHHHHcCCCEEecCccc-c-cccccCCcceEeCCCHHHHHHHHHHHHcC-HHHHHHHH
Confidence            999999999999656999999999999999999999753 2 33445567988877999999999999998 89999999


Q ss_pred             HHHHHHHHHhcCHHHHHHHHHHHHH
Q 039338          458 EACRQYAASMFTANKMALAYERLFL  482 (493)
Q Consensus       458 ~~~~~~~~~~fs~~~~~~~~~~~~~  482 (493)
                      ++++++++++|||+.++++++++|.
T Consensus       371 ~~ar~~v~~~fsw~~~~~~~~~~l~  395 (397)
T TIGR03087       371 QAARRRVLQHYHWPRNLARLDALLE  395 (397)
T ss_pred             HHHHHHHHHhCCHHHHHHHHHHHhc
Confidence            9999999999999999999999885

Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.

>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds

Probab=100.00  E-value=5.1e-38  Score=308.58  Aligned_cols=344  Identities=24%  Similarity=0.309  Sum_probs=255.8

Q ss_pred             EEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCC------
Q 039338           85 KIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEA------  158 (493)
Q Consensus        85 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------  158 (493)
                      ||+++++.||+     +.++++.++++.|.  ||+|++++..... ..+....          ...+.......      
T Consensus         1 ~~~~~~~~~~~-----~~e~~~~~~~~~l~--~~~~~~~~~~~~~-~~~~~~~----------~~~~~~~~~~~~~~~~~   62 (367)
T cd05844           1 RVLIFRPLLLA-----PSETFVRNQAEALR--RFRPVYVGGRRLG-PAPLGAL----------AVRLADLAGGKAGLRLG   62 (367)
T ss_pred             CEEEEeCCCCC-----CchHHHHHHHHhcc--cCCcEEEEeeccC-CCCCccc----------ceeeeecccchhHHHHH
Confidence            58999998865     27889999999994  7888888876544 1111111          01111110000      


Q ss_pred             CccccccchHHHHHHhcCCCCcEEEeCccc--hhH---HhhhccCcEEEEeccchhhhhhhhhhhhhhcCCCCccchHhH
Q 039338          159 DKWRYSKGWEQFDEENQREPFDVVHSESVA--LPH---WLARNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFN  233 (493)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~DiI~~~~~~--~~~---~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (493)
                      ...........+...+++.+||+||+|...  +..   ....++| +++++|+...........         ..    .
T Consensus        63 ~~~~~~~~~~~~~~~~~~~~~dvvh~~~~~~~~~~~~~~~~~~~p-~i~~~h~~~~~~~~~~~~---------~~----~  128 (367)
T cd05844          63 ALRLLTGSAPQLRRLLRRHRPDLVHAHFGFDGVYALPLARRLGVP-LVVTFHGFDATTSLALLL---------RS----R  128 (367)
T ss_pred             HHHhccccccHHHHHHHhhCCCEEEeccCchHHHHHHHHHHcCCC-EEEEEeCccccccchhhc---------cc----c
Confidence            001112222344445667899999998642  111   1223567 999999753221100000         00    0


Q ss_pred             hHHHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCCCCCCcEE
Q 039338          234 KSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLV  313 (493)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~  313 (493)
                      ......     .+...++.+|.++++|+.+++.+.+ +|++..++.+++||+|.+.+.+...            ..++..
T Consensus       129 ~~~~~~-----~~~~~~~~~d~ii~~s~~~~~~~~~-~~~~~~~i~vi~~g~d~~~~~~~~~------------~~~~~~  190 (367)
T cd05844         129 WALYAR-----RRRRLARRAALFIAVSQFIRDRLLA-LGFPPEKVHVHPIGVDTAKFTPATP------------ARRPPR  190 (367)
T ss_pred             hhHHHH-----HHHHHHHhcCEEEECCHHHHHHHHH-cCCCHHHeEEecCCCCHHhcCCCCC------------CCCCcE
Confidence            011111     1235678999999999999999988 4778889999999999877654321            122367


Q ss_pred             EEEecccccccChHHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhhh------cCcEEEecCCCHHHHHHHHHHcCEEEe
Q 039338          314 LGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDF------GHQVLVMGSMSPAELRAFYNAIDIFVN  387 (493)
Q Consensus       314 i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~l------~~~V~~~g~~~~~~~~~~~~~adv~v~  387 (493)
                      ++++|++.+.||++.+++|+..+.+++++++|+++|+|+..+.++++      .++|.|+|+++++++.++|+.||++++
T Consensus       191 i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~l~ivG~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~l~~~~~~ad~~v~  270 (367)
T cd05844         191 ILFVGRFVEKKGPLLLLEAFARLARRVPEVRLVIIGDGPLLAALEALARALGLGGRVTFLGAQPHAEVRELMRRARIFLQ  270 (367)
T ss_pred             EEEEEeeccccChHHHHHHHHHHHHhCCCeEEEEEeCchHHHHHHHHHHHcCCCCeEEECCCCCHHHHHHHHHhCCEEEE
Confidence            88999999999999999999999988899999999998766554432      378999999999999999999999999


Q ss_pred             CCCC-----CCCCChHHHHHHHcCCcEEecCCCCCccceeeeCcceEEECC-CHHHHHHHHHHHHHcCcHHHHHHHHHHH
Q 039338          388 PTLR-----PQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAP-NVESLHKTLEAAVSEGPMRLAQRGEACR  461 (493)
Q Consensus       388 ps~~-----~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~~-d~~~l~~~i~~ll~~~~~~~~~~~~~~~  461 (493)
                      ||..     .||+|++++|||+||+|||+++.++.. |++.++++|+++++ |+++++++|.+++++ ++.+.+++.+++
T Consensus       271 ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~~~-e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~-~~~~~~~~~~a~  348 (367)
T cd05844         271 PSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGGIP-EAVEDGETGLLVPEGDVAALAAALGRLLAD-PDLRARMGAAGR  348 (367)
T ss_pred             CcccCCCCCccCCchHHHHHHHcCCCEEEeCCCCch-hheecCCeeEEECCCCHHHHHHHHHHHHcC-HHHHHHHHHHHH
Confidence            9962     489999999999999999999999988 88899999999998 999999999999998 899999999999


Q ss_pred             HHHHHhcCHHHHHHHHHHH
Q 039338          462 QYAASMFTANKMALAYERL  480 (493)
Q Consensus       462 ~~~~~~fs~~~~~~~~~~~  480 (493)
                      +++++.|||+.+++++.++
T Consensus       349 ~~~~~~~s~~~~~~~l~~i  367 (367)
T cd05844         349 RRVEERFDLRRQTAKLEAL  367 (367)
T ss_pred             HHHHHHCCHHHHHHHHhcC
Confidence            9999999999999998753

The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center

>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose

Probab=100.00  E-value=4.1e-38  Score=309.16  Aligned_cols=350  Identities=17%  Similarity=0.151  Sum_probs=248.9

Q ss_pred             EEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCCCc-ccc
Q 039338           85 KIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEADK-WRY  163 (493)
Q Consensus        85 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  163 (493)
                      ||++++..+    ..||+++++.+++++|.+.||+|++++.....  .. ....+..... .....+..   .... ..+
T Consensus         1 ki~~~~~~~----~~GGv~~~~~~l~~~l~~~g~~v~~~~~~~~~--~~-~~~~~~~~~~-~~g~~~~~---~~~~~~~~   69 (372)
T cd03792           1 KVLHVNSTP----YGGGVAEILHSLVPLMRDLGVDTRWEVIKGDP--EF-FNVTKKFHNA-LQGADIEL---SEEEKEIY   69 (372)
T ss_pred             CeEEEeCCC----CCCcHHHHHHHHHHHHHHcCCCceEEecCCCh--hH-HHHHHHhhHh-hcCCCCCC---CHHHHHHH
Confidence            699999865    66999999999999999999999999875433  10 0000000000 00111100   0000 000


Q ss_pred             ccchHHHHH-HhcCCCCcEEEeCccchhHH---hhh-ccCcEEEEeccchhhhhhhhhhhhhhcCCCCccchHhHhHHHH
Q 039338          164 SKGWEQFDE-ENQREPFDVVHSESVALPHW---LAR-NVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQG  238 (493)
Q Consensus       164 ~~~~~~~~~-~~~~~~~DiI~~~~~~~~~~---~~~-~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (493)
                      ......... .....+||+||+|+.....+   ... ..| ++.+.|......                .     .....
T Consensus        70 ~~~~~~~~~~~~~~~~~Dvv~~h~~~~~~~~~~~~~~~~~-~i~~~H~~~~~~----------------~-----~~~~~  127 (372)
T cd03792          70 LEWNEENAERPLLDLDADVVVIHDPQPLALPLFKKKRGRP-WIWRCHIDLSSP----------------N-----RRVWD  127 (372)
T ss_pred             HHHHHHHhccccccCCCCEEEECCCCchhHHHhhhcCCCe-EEEEeeeecCCC----------------c-----HHHHH
Confidence            000111111 23366899999997642222   222 456 888889643110                0     01111


Q ss_pred             HHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCcc---CCcccchhhhhhhCCCCCCcEEEE
Q 039338          239 VMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYG---VDLSLGQSFRSRIGIPKNASLVLG  315 (493)
Q Consensus       239 ~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~---~~~~~~~~~r~~~~i~~~~~~~i~  315 (493)
                      .+      .++++++|.+++.+...   ..  .+++..++ ++|||+|.....   ..+......++++++++++ .+|+
T Consensus       128 ~~------~~~~~~~d~~i~~~~~~---~~--~~~~~~~~-vipngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~  194 (372)
T cd03792         128 FL------QPYIEDYDAAVFHLPEY---VP--PQVPPRKV-IIPPSIDPLSGKNRELSPADIEYILEKYGIDPER-PYIT  194 (372)
T ss_pred             HH------HHHHHhCCEEeecHHHh---cC--CCCCCceE-EeCCCCCCCccccCCCCHHHHHHHHHHhCCCCCC-cEEE
Confidence            11      24567899988888332   22  24455555 999999975321   1222334677889988776 6788


Q ss_pred             EecccccccChHHHHHHHHHHHhhCCCeEEEEEeCCCcH--------HHHh-h--hcCcEEEecCC--CHHHHHHHHHHc
Q 039338          316 VAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWE--------QRYK-D--FGHQVLVMGSM--SPAELRAFYNAI  382 (493)
Q Consensus       316 ~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~--------~~~~-~--l~~~V~~~g~~--~~~~~~~~~~~a  382 (493)
                      ++||+.+.||++.+++++..+.++.++++|+++|+|+..        +.+. +  +.++|.|+|..  +++++..+|++|
T Consensus       195 ~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~a  274 (372)
T cd03792         195 QVSRFDPWKDPFGVIDAYRKVKERVPDPQLVLVGSGATDDPEGWIVYEEVLEYAEGDPDIHVLTLPPVSDLEVNALQRAS  274 (372)
T ss_pred             EEeccccccCcHHHHHHHHHHHhhCCCCEEEEEeCCCCCCchhHHHHHHHHHHhCCCCCeEEEecCCCCHHHHHHHHHhC
Confidence            999999999999999999999888789999999998642        1211 1  23789999986  889999999999


Q ss_pred             CEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCccceeeeCcceEEECCCHHHHHHHHHHHHHcCcHHHHHHHHHHHH
Q 039338          383 DIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAPNVESLHKTLEAAVSEGPMRLAQRGEACRQ  462 (493)
Q Consensus       383 dv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~  462 (493)
                      |++++||. .||||++++|||+||+|||+++.++.. +++.++.+|++++ ++++++++|.+++++ ++.+++|++++++
T Consensus       275 d~~v~~s~-~Eg~g~~~lEA~a~G~Pvv~s~~~~~~-~~i~~~~~g~~~~-~~~~~a~~i~~ll~~-~~~~~~~~~~a~~  350 (372)
T cd03792         275 TVVLQKSI-REGFGLTVTEALWKGKPVIAGPVGGIP-LQIEDGETGFLVD-TVEEAAVRILYLLRD-PELRRKMGANARE  350 (372)
T ss_pred             eEEEeCCC-ccCCCHHHHHHHHcCCCEEEcCCCCch-hhcccCCceEEeC-CcHHHHHHHHHHHcC-HHHHHHHHHHHHH
Confidence            99999996 599999999999999999999999988 8889999999987 677889999999998 8999999999999


Q ss_pred             HHHHhcCHHHHHHHHHHHHHHH
Q 039338          463 YAASMFTANKMALAYERLFLCI  484 (493)
Q Consensus       463 ~~~~~fs~~~~~~~~~~~~~~i  484 (493)
                      .+.+.|+|+.+++++.++|+++
T Consensus       351 ~~~~~~s~~~~~~~~~~~~~~~  372 (372)
T cd03792         351 HVRENFLITRHLKDYLYLISKL  372 (372)
T ss_pred             HHHHHcCHHHHHHHHHHHHHhC
Confidence            9988899999999999999863

The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.

>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=4.8e-38  Score=304.76  Aligned_cols=324  Identities=24%  Similarity=0.305  Sum_probs=243.9

Q ss_pred             eEEEEEeccC-C-CCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCCCcc
Q 039338           84 LKIAVFSRKW-P-ISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEADKW  161 (493)
Q Consensus        84 mkIl~v~~~~-p-~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (493)
                      |||+++++.+ | +++..||+++++..|+++|.++||+|++++.............          ..............
T Consensus         1 MkI~~i~~~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~V~v~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~   70 (335)
T cd03802           1 MRIALVAPPREPVPPPAYGGTERVVAALTEGLVARGHEVTLFASGDSKTAAPLVPV----------VPEPLRLDAPGRDR   70 (335)
T ss_pred             CeEEEEcCCcccCCCcccCcHHHHHHHHHHHHHhcCceEEEEecCCCCcccceeec----------cCCCcccccchhhH
Confidence            8999999976 2 1358999999999999999999999999998765411000000          00000000011112


Q ss_pred             ccccchHHHHHHhcCCCCcEEEeCccchhH--HhhhccCcEEEEeccchhhhhhhhhhhhhhcCCCCccchHhHhHHHHH
Q 039338          162 RYSKGWEQFDEENQREPFDVVHSESVALPH--WLARNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQGV  239 (493)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~DiI~~~~~~~~~--~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (493)
                      ........+.+.+++.+||+||+|+.....  ....+.| ++.+.|+.......                     .    
T Consensus        71 ~~~~~~~~~~~~~~~~~~Divh~~~~~~~~~~~~~~~~~-~v~~~h~~~~~~~~---------------------~----  124 (335)
T cd03802          71 AEAEALALAERALAAGDFDIVHNHSLHLPLPFARPLPVP-VVTTLHGPPDPELL---------------------K----  124 (335)
T ss_pred             hhHHHHHHHHHHHhcCCCCEEEecCcccchhhhcccCCC-EEEEecCCCCcccc---------------------h----
Confidence            223344566677778899999999864333  2333456 99999986432110                     0    


Q ss_pred             HHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCCCCCCcEEEEEecc
Q 039338          240 MLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVAGR  319 (493)
Q Consensus       240 ~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Gr  319 (493)
                            ........+.++++|+...+.+...     .++.+||||+|.+.|.+..             .++ ..++++||
T Consensus       125 ------~~~~~~~~~~~~~~s~~~~~~~~~~-----~~~~vi~ngvd~~~~~~~~-------------~~~-~~i~~~Gr  179 (335)
T cd03802         125 ------LYYAARPDVPFVSISDAQRRPWPPL-----PWVATVHNGIDLDDYPFRG-------------PKG-DYLLFLGR  179 (335)
T ss_pred             ------HHHhhCcCCeEEEecHHHHhhcccc-----cccEEecCCcChhhCCCCC-------------CCC-CEEEEEEe
Confidence                  0123457788999999998876542     6899999999998876522             122 46789999


Q ss_pred             cccccChHHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHh----h---hcCcEEEecCCCHHHHHHHHHHcCEEEeCCCCC
Q 039338          320 LVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYK----D---FGHQVLVMGSMSPAELRAFYNAIDIFVNPTLRP  392 (493)
Q Consensus       320 ~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~----~---l~~~V~~~g~~~~~~~~~~~~~adv~v~ps~~~  392 (493)
                      +.+.||++.+++++++.     +++++++|.|+..+...    +   +.++|.|+|+++++++.++|+.+|++++||...
T Consensus       180 ~~~~Kg~~~li~~~~~~-----~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~~~~~~~~~~d~~v~ps~~~  254 (335)
T cd03802         180 ISPEKGPHLAIRAARRA-----GIPLKLAGPVSDPDYFYREIAPELLDGPDIEYLGEVGGAEKAELLGNARALLFPILWE  254 (335)
T ss_pred             eccccCHHHHHHHHHhc-----CCeEEEEeCCCCHHHHHHHHHHhcccCCcEEEeCCCCHHHHHHHHHhCcEEEeCCccc
Confidence            99999999999997653     78999999986544322    2   258999999999999999999999999999756


Q ss_pred             CCCChHHHHHHHcCCcEEecCCCCCccceeeeCcceEEECCCHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHhcCHHH
Q 039338          393 QGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAPNVESLHKTLEAAVSEGPMRLAQRGEACRQYAASMFTANK  472 (493)
Q Consensus       393 eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~  472 (493)
                      |++|++++|||+||+|||+++.|+.+ |++.++.+|+++++ +++++++|.++.+. .      .+++++.+.++|||+.
T Consensus       255 E~~~~~~lEAma~G~PvI~~~~~~~~-e~i~~~~~g~l~~~-~~~l~~~l~~l~~~-~------~~~~~~~~~~~~s~~~  325 (335)
T cd03802         255 EPFGLVMIEAMACGTPVIAFRRGAVP-EVVEDGVTGFLVDS-VEELAAAVARADRL-D------RAACRRRAERRFSAAR  325 (335)
T ss_pred             CCcchHHHHHHhcCCCEEEeCCCCch-hheeCCCcEEEeCC-HHHHHHHHHHHhcc-H------HHHHHHHHHHhCCHHH
Confidence            99999999999999999999999998 89999989999995 99999999998654 2      2467788889999999


Q ss_pred             HHHHHHHHHH
Q 039338          473 MALAYERLFL  482 (493)
Q Consensus       473 ~~~~~~~~~~  482 (493)
                      ++++|.++|+
T Consensus       326 ~~~~~~~~y~  335 (335)
T cd03802         326 MVDDYLALYR  335 (335)
T ss_pred             HHHHHHHHhC
Confidence            9999999984

aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.

>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=1.8e-37  Score=303.36  Aligned_cols=342  Identities=24%  Similarity=0.316  Sum_probs=250.2

Q ss_pred             EEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCCCccccc
Q 039338           85 KIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEADKWRYS  164 (493)
Q Consensus        85 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (493)
                      ||++++..|||  ..||+++++..++++|.++||+|++++.....  ......       ..... +.............
T Consensus         1 kil~i~~~~~p--~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~--~~~~~~-------~~~~~-~~~~~~~~~~~~~~   68 (357)
T cd03795           1 RVLHVGKFYPP--DRGGIEQVIRDLAEGLAARGIEVAVLCASPEP--KGRDEE-------RNGHR-VIRAPSLLNVASTP   68 (357)
T ss_pred             CeeEecCCCCC--CCCcHHHHHHHHHHHHHhCCCceEEEecCCCC--cchhhh-------ccCce-EEEeeccccccccc
Confidence            69999999876  58999999999999999999999999987654  111111       01111 11111110101111


Q ss_pred             cchHHHHHH-hcCCCCcEEEeCccchhH----Hhh-hccCcEEEEeccchhhhhhhhhhhhhhcCCCCccchHhHhHHHH
Q 039338          165 KGWEQFDEE-NQREPFDVVHSESVALPH----WLA-RNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQG  238 (493)
Q Consensus       165 ~~~~~~~~~-~~~~~~DiI~~~~~~~~~----~~~-~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (493)
                      ......... ....++|+||++......    ++. .+.| .+.++|+......                   .......
T Consensus        69 ~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~~~~~-~i~~~h~~~~~~~-------------------~~~~~~~  128 (357)
T cd03795          69 FSPSFFKQLKKLAKKADVIHLHFPNPLADLALLLLPRKKP-VVVHWHSDIVKQK-------------------LLLKLYR  128 (357)
T ss_pred             ccHHHHHHHHhcCCCCCEEEEecCcchHHHHHHHhccCce-EEEEEcChhhccc-------------------hhhhhhh
Confidence            111111111 447799999998753211    111 2345 8888886321100                   0011111


Q ss_pred             HHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCCCCCCcEEEEEec
Q 039338          239 VMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVAG  318 (493)
Q Consensus       239 ~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~G  318 (493)
                      .+     +.++++++|.++++|+...+.+...++. ..++.++|||+|...+.+......   .....+.+ +++++++|
T Consensus       129 ~~-----~~~~~~~~d~vi~~s~~~~~~~~~~~~~-~~~~~~i~~gi~~~~~~~~~~~~~---~~~~~~~~-~~~i~~~G  198 (357)
T cd03795         129 PL-----QRRFLRRADAIVATSPNYAETSPVLRRF-RDKVRVIPLGLDPARYPRPDALEE---AIWRRAAG-RPFFLFVG  198 (357)
T ss_pred             HH-----HHHHHHhcCEEEeCcHHHHHHHHHhcCC-ccceEEecCCCChhhcCCcchhhh---HhhcCCCC-CcEEEEec
Confidence            11     2256789999999999999988775544 378999999999987765432111   11222333 47889999


Q ss_pred             ccccccChHHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhhh------cCcEEEecCCCHHHHHHHHHHcCEEEeCCC-C
Q 039338          319 RLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDF------GHQVLVMGSMSPAELRAFYNAIDIFVNPTL-R  391 (493)
Q Consensus       319 r~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~l------~~~V~~~g~~~~~~~~~~~~~adv~v~ps~-~  391 (493)
                      ++.+.||++.++++++++.    +++++++|+|+....++++      .++|.|+|+++++++.++|+.||++++||. .
T Consensus       199 ~~~~~K~~~~li~a~~~l~----~~~l~i~G~g~~~~~~~~~~~~~~~~~~V~~~g~v~~~~~~~~~~~ad~~i~ps~~~  274 (357)
T cd03795         199 RLVYYKGLDVLLEAAAALP----DAPLVIVGEGPLEAELEALAAALGLLDRVRFLGRLDDEEKAALLAACDVFVFPSVER  274 (357)
T ss_pred             ccccccCHHHHHHHHHhcc----CcEEEEEeCChhHHHHHHHHHhcCCcceEEEcCCCCHHHHHHHHHhCCEEEeCCccc
Confidence            9999999999999999985    7999999999876655542      279999999999999999999999999985 3


Q ss_pred             CCCCChHHHHHHHcCCcEEecCCCCCccceeee-CcceEEECC-CHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHhcC
Q 039338          392 PQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVD-DEFGFMFAP-NVESLHKTLEAAVSEGPMRLAQRGEACRQYAASMFT  469 (493)
Q Consensus       392 ~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~-~~~G~~~~~-d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs  469 (493)
                      .|++|++++|||++|+|||+++.++.. +.+.+ +++|+++++ |+++++++|.+++++ ++.+++|++++++.+++.||
T Consensus       275 ~e~~g~~~~Ea~~~g~Pvi~~~~~~~~-~~i~~~~~~g~~~~~~d~~~~~~~i~~l~~~-~~~~~~~~~~~~~~~~~~~s  352 (357)
T cd03795         275 SEAFGIVLLEAMAFGKPVISTEIGTGG-SYVNLHGVTGLVVPPGDPAALAEAIRRLLED-PELRERLGEAARERAEEEFT  352 (357)
T ss_pred             ccccchHHHHHHHcCCCEEecCCCCch-hHHhhCCCceEEeCCCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHhcc
Confidence            599999999999999999999999988 66665 899999998 999999999999999 89999999999999999999


Q ss_pred             HHHHH
Q 039338          470 ANKMA  474 (493)
Q Consensus       470 ~~~~~  474 (493)
                      |+.++
T Consensus       353 ~~~~~  357 (357)
T cd03795         353 ADRMV  357 (357)
T ss_pred             hHhhC
Confidence            99864

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog

>TIGR02470 sucr_synth sucrose synthase

Probab=100.00  E-value=6.4e-37  Score=311.91  Aligned_cols=382  Identities=16%  Similarity=0.156  Sum_probs=253.3

Q ss_pred             CCCceEEEEEeccC----CC---CCCCCchHHHHHHHHHHH--------HhCCC----EEEEEecCCCCCCCCCCccccC
Q 039338           80 SKFTLKIAVFSRKW----PI---STTPGGMERHAHTLHVAL--------ARRGH----RVHIFTSPVDNINSPSISHQEN  140 (493)
Q Consensus        80 ~~~~mkIl~v~~~~----p~---~~~~gG~~~~~~~l~~~L--------~~~G~----~V~v~~~~~~~~~~~~~~~~~~  140 (493)
                      .+..|||++++.+.    ++   .+..||...++..++++|        +++||    +|+|+|.....  .........
T Consensus       252 ~p~~~rIa~lS~Hg~~~~~~~lG~~DtGGq~vYV~elaraL~~~~~~~La~~G~~v~~~V~I~TR~~~~--~~~~~~~~~  329 (784)
T TIGR02470       252 IPMVFNVVILSPHGYFGQENVLGLPDTGGQVVYILDQVRALENEMLQRIKLQGLEITPKILIVTRLIPD--AEGTTCNQR  329 (784)
T ss_pred             CCccceEEEEecccccCCccccCCCCCCCceeHHHHHHHHHHHHHHHHHHhcCCCccceEEEEecCCCC--ccccccccc
Confidence            34569999999975    21   124699999999999985        68899    77899987654  111100000


Q ss_pred             CCCCCCCCCceEeec---CCCCc------cccccchH-------HHHH-Hh--cCCCCcEEEeCcc--chhHH-hh--hc
Q 039338          141 DDGSNNKYPLLHFHE---GEADK------WRYSKGWE-------QFDE-EN--QREPFDVVHSESV--ALPHW-LA--RN  196 (493)
Q Consensus       141 ~~~~~~~~~~~~~~~---~~~~~------~~~~~~~~-------~~~~-~~--~~~~~DiI~~~~~--~~~~~-~~--~~  196 (493)
                      .. ...+...+++..   .....      ......|.       .+.+ +.  ...+||+||+|.+  ++.+. ++  .+
T Consensus       330 ~e-~~~~~~~~~I~rvp~g~~~~~~~~~~i~k~~l~p~l~~f~~~~~~~~~~~~~~~pDlIHahy~d~glva~lla~~lg  408 (784)
T TIGR02470       330 LE-KVYGTEHAWILRVPFRTENGIILRNWISRFEIWPYLETFAEDAEKEILAELQGKPDLIIGNYSDGNLVASLLARKLG  408 (784)
T ss_pred             cc-cccCCCceEEEEecCCCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCCchHHHHHHHHHhcC
Confidence            00 011122222222   11110      01111111       1111 11  1357999999964  22222 22  25


Q ss_pred             cCcEEEEeccchhhhh-hhhhhhhhhcCCCCccchHhHhHHHHHHHHHHHHHHhhccCCeEEEcChhHHH----HHHH--
Q 039338          197 VTNLAVSWHGIALESL-QSGIFQDLTRKPLEPMSLAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGE----MLRD--  269 (493)
Q Consensus       197 ~p~~v~~~h~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~----~~~~--  269 (493)
                      +| .+.+.|....... +++..         ..  .. ...+....++..+...+..||.||+.|.....    .+.+  
T Consensus       409 VP-~v~t~HsL~~~K~~~~g~~---------~~--~~-e~~~~~~~r~~ae~~~~~~AD~IItsT~qEi~~~~~~v~qY~  475 (784)
T TIGR02470       409 VT-QCTIAHALEKTKYPDSDIY---------WQ--EF-EDKYHFSCQFTADLIAMNAADFIITSTYQEIAGTKDSVGQYE  475 (784)
T ss_pred             CC-EEEECCcchhhcccccccc---------cc--cc-hhHHHhhhhhhHHHHHHhcCCEEEECcHHHhhhhhhhhhhhh
Confidence            67 8899997632210 00000         00  00 01111122333355678899999999975422    2211  


Q ss_pred             ---------Hh----CC--CCCcEEEecCCccCCCccCCcccch-----------------hhhhhhCC--CCCCcEEEE
Q 039338          270 ---------VY----QI--PSERVHVILNGINENEYGVDLSLGQ-----------------SFRSRIGI--PKNASLVLG  315 (493)
Q Consensus       270 ---------~~----~~--~~~~v~vi~ngvd~~~~~~~~~~~~-----------------~~r~~~~i--~~~~~~~i~  315 (493)
                               .|    |+  +.+|+.+||+|+|...|.+......                 ..++.+|+  +.++ .+|+
T Consensus       476 s~~~ft~p~Ly~vvnGid~~~~Ki~VVpPGVD~~iF~P~~~~~~r~~~~~~~ie~ll~~~~~~~~~~G~l~d~~k-piIl  554 (784)
T TIGR02470       476 SHQAFTMPGLYRVVHGIDVFDPKFNIVSPGADESIYFPYSDKEKRLTNLHPEIEELLFSLEDNDEHYGYLKDPNK-PIIF  554 (784)
T ss_pred             hcccccccceeeeecCccCCcCCeEEECCCcChhhcCCCCchhhhhhhhhcchhhhccchhhHHHHhCCCCCCCC-cEEE
Confidence                     11    22  4579999999999998876443211                 12356665  3344 6788


Q ss_pred             EecccccccChHHHHHHHHHHHhhCCCeEEEEEeCCCc------HH---HHh-------hh--cCcEEEecCC-CHHHHH
Q 039338          316 VAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPW------EQ---RYK-------DF--GHQVLVMGSM-SPAELR  376 (493)
Q Consensus       316 ~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~------~~---~~~-------~l--~~~V~~~g~~-~~~~~~  376 (493)
                      ++||+.+.||++.+++|+.++....++++|+|+|++..      .+   ..+       ++  .++|.|+|.. +..+..
T Consensus       555 ~VGRL~~~KGid~LIeA~~~l~~l~~~~~LVIVGGg~~~~~s~d~ee~~~i~~L~~la~~~gL~g~V~flG~~~~~~~~~  634 (784)
T TIGR02470       555 SMARLDRVKNLTGLVECYGRSPKLRELVNLVVVAGKLDAKESKDREEQAEIEKMHNLIDQYQLHGQIRWIGAQLNRVRNG  634 (784)
T ss_pred             EEeCCCccCCHHHHHHHHHHhHhhCCCeEEEEEeCCcccccccchhHHHHHHHHHHHHHHhCCCCeEEEccCcCCcccHH
Confidence            99999999999999999998765556799999997642      11   111       22  2789999985 555666


Q ss_pred             HHHH----HcCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCccceeeeCcceEEECC-CHHHHHHHHHHHH----H
Q 039338          377 AFYN----AIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAP-NVESLHKTLEAAV----S  447 (493)
Q Consensus       377 ~~~~----~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~~-d~~~l~~~i~~ll----~  447 (493)
                      ++|+    .+|++|+||. .|+||++++|||+||+|||+|+.||.. |+|.++.+|+++++ |+++++++|.+++    .
T Consensus       635 elyr~iAd~adVfV~PS~-~EpFGLvvLEAMAcGlPVVAT~~GG~~-EiV~dg~tGfLVdp~D~eaLA~aL~~ll~kll~  712 (784)
T TIGR02470       635 ELYRYIADTKGIFVQPAL-YEAFGLTVLEAMTCGLPTFATRFGGPL-EIIQDGVSGFHIDPYHGEEAAEKIVDFFEKCDE  712 (784)
T ss_pred             HHHHHhhccCcEEEECCc-ccCCCHHHHHHHHcCCCEEEcCCCCHH-HHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcC
Confidence            6664    3579999996 599999999999999999999999998 99999999999999 9999999999886    4


Q ss_pred             cCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 039338          448 EGPMRLAQRGEACRQYAASMFTANKMALAYERLF  481 (493)
Q Consensus       448 ~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~  481 (493)
                      | ++.++++++++++++.++|||+.+++++.++.
T Consensus       713 d-p~~~~~ms~~a~~rV~~~FSW~~~A~~ll~l~  745 (784)
T TIGR02470       713 D-PSYWQKISQGGLQRIYEKYTWKIYSERLLTLA  745 (784)
T ss_pred             C-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence            6 89999999999999999999999999998876

This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.

>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional

Probab=100.00  E-value=1.4e-37  Score=302.79  Aligned_cols=290  Identities=14%  Similarity=0.182  Sum_probs=219.5

Q ss_pred             chHHHHHHhcCCCCcEEEeCccc--hhHH---hhhccCcEEEEeccchhhhhhhhhhhhhhcCCCCccchHhHhHHHHHH
Q 039338          166 GWEQFDEENQREPFDVVHSESVA--LPHW---LARNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQGVM  240 (493)
Q Consensus       166 ~~~~~~~~~~~~~~DiI~~~~~~--~~~~---~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (493)
                      .+..+...+++.+|||||+|...  +...   +..+.|.++.+.|++....     .                ......-
T Consensus       268 ~~~~l~~~ir~~rpDIVHt~~~~a~l~g~laA~lagvpviv~~~h~~~~~~-----~----------------~r~~~~e  326 (578)
T PRK15490        268 GIKHLVPHLCERKLDYLSVWQDGACLMIALAALIAGVPRIQLGLRGLPPVV-----R----------------KRLFKPE  326 (578)
T ss_pred             HHHHHHHHHHHcCCCEEEEcCcccHHHHHHHHHhcCCCEEEEeecccCCcc-----h----------------hhHHHHH
Confidence            34566777789999999999653  2222   2235563455667621110     0                0000000


Q ss_pred             HHHHHH-HHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhh--hCCCCCCcEEEEEe
Q 039338          241 LKVLNE-IRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSR--IGIPKNASLVLGVA  317 (493)
Q Consensus       241 ~~~~~~-~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~--~~i~~~~~~~i~~~  317 (493)
                      .....+ ......+| +++.|....+.+.+.++++.+++.+||||+|...|.+........+..  .+++++. ++++++
T Consensus       327 ~~~~~~a~~i~~~sd-~v~~s~~v~~~l~~~lgip~~KI~VIyNGVD~~rf~p~~~~~~~~r~~~~~~l~~~~-~vIg~V  404 (578)
T PRK15490        327 YEPLYQALAVVPGVD-FMSNNHCVTRHYADWLKLEAKHFQVVYNGVLPPSTEPSSEVPHKIWQQFTQKTQDAD-TTIGGV  404 (578)
T ss_pred             HHHhhhhceeEecch-hhhccHHHHHHHHHHhCCCHHHEEEEeCCcchhhcCccchhhHHHHHHhhhccCCCC-cEEEEE
Confidence            001111 01234445 778899999999888899999999999999998877654322223332  3444444 678899


Q ss_pred             cccccccChHHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhhh------cCcEEEecCCCHHHHHHHHHHcCEEEeCCCC
Q 039338          318 GRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDF------GHQVLVMGSMSPAELRAFYNAIDIFVNPTLR  391 (493)
Q Consensus       318 Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~l------~~~V~~~g~~~~~~~~~~~~~adv~v~ps~~  391 (493)
                      ||+.+.||+..+++++.++.++.++++|+|+|+|+..+.++++      .++|.|+|+.  +++..+|+.+|++|+||.+
T Consensus       405 gRl~~~Kg~~~LI~A~a~llk~~pdirLvIVGdG~~~eeLk~la~elgL~d~V~FlG~~--~Dv~~~LaaADVfVlPS~~  482 (578)
T PRK15490        405 FRFVGDKNPFAWIDFAARYLQHHPATRFVLVGDGDLRAEAQKRAEQLGILERILFVGAS--RDVGYWLQKMNVFILFSRY  482 (578)
T ss_pred             EEEehhcCHHHHHHHHHHHHhHCCCeEEEEEeCchhHHHHHHHHHHcCCCCcEEECCCh--hhHHHHHHhCCEEEEcccc
Confidence            9999999999999999999888899999999999887665542      3889999995  7899999999999999964


Q ss_pred             CCCCChHHHHHHHcCCcEEecCCCCCccceeeeCcceEEECC-CHHHHHHHH---HHHHHcCcHHHHHHHHHHHHHHHHh
Q 039338          392 PQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAP-NVESLHKTL---EAAVSEGPMRLAQRGEACRQYAASM  467 (493)
Q Consensus       392 ~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~~-d~~~l~~~i---~~ll~~~~~~~~~~~~~~~~~~~~~  467 (493)
                       ||||++++|||++|+|||+++.||.+ |++.++.+|+++++ |++++++++   .++.++ .+....++++++++++++
T Consensus       483 -EGfp~vlLEAMA~GlPVVATdvGG~~-EiV~dG~nG~LVp~~D~~aLa~ai~lA~aL~~l-l~~~~~mg~~ARe~V~e~  559 (578)
T PRK15490        483 -EGLPNVLIEAQMVGVPVISTPAGGSA-ECFIEGVSGFILDDAQTVNLDQACRYAEKLVNL-WRSRTGICQQTQSFLQER  559 (578)
T ss_pred             -cCccHHHHHHHHhCCCEEEeCCCCcH-HHcccCCcEEEECCCChhhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhh
Confidence             99999999999999999999999998 99999999999999 888888876   444544 455667999999999999


Q ss_pred             cCHHHHHHHHHHHHHH
Q 039338          468 FTANKMALAYERLFLC  483 (493)
Q Consensus       468 fs~~~~~~~~~~~~~~  483 (493)
                      |||+.++++|.++|..
T Consensus       560 FS~e~Mv~~y~ki~~~  575 (578)
T PRK15490        560 FTVEHMVGTFVKTIAS  575 (578)
T ss_pred             CCHHHHHHHHHHHHHh
Confidence            9999999999999975

>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=1.3e-37  Score=304.44  Aligned_cols=351  Identities=24%  Similarity=0.324  Sum_probs=270.2

Q ss_pred             EEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCCCccccc
Q 039338           85 KIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEADKWRYS  164 (493)
Q Consensus        85 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (493)
                      ||++++..+    ..||+++.+..|+++|.+.||+|.+++.....  ......       ......+........ ....
T Consensus         1 ~i~~i~~~~----~~gG~~~~~~~l~~~l~~~~~~v~~~~~~~~~--~~~~~~-------~~~~i~v~~~~~~~~-~~~~   66 (365)
T cd03807           1 KVLHVITGL----DVGGAERMLVRLLKGLDRDRFEHVVISLTDRG--ELGEEL-------EEAGVPVYCLGKRPG-RPDP   66 (365)
T ss_pred             CeEEEEeec----cCccHHHHHHHHHHHhhhccceEEEEecCcch--hhhHHH-------HhcCCeEEEEecccc-cccH
Confidence            689999977    44999999999999999999999999875443  111111       111122222222211 2233


Q ss_pred             cchHHHHHHhcCCCCcEEEeCccc--hhH----HhhhccCcEEEEeccchhhhhhhhhhhhhhcCCCCccchHhHhHHHH
Q 039338          165 KGWEQFDEENQREPFDVVHSESVA--LPH----WLARNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQG  238 (493)
Q Consensus       165 ~~~~~~~~~~~~~~~DiI~~~~~~--~~~----~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (493)
                      ..+..+.+.+++.+||+||++...  ...    ......+ ++++.|+......                  ........
T Consensus        67 ~~~~~~~~~~~~~~~div~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~------------------~~~~~~~~  127 (365)
T cd03807          67 GALLRLYKLIRRLRPDVVHTWMYHADLYGGLAARLAGVPP-VIWGIRHSDLDLG------------------KKSTRLVA  127 (365)
T ss_pred             HHHHHHHHHHHhhCCCEEEeccccccHHHHHHHHhcCCCc-EEEEecCCccccc------------------chhHhHHH
Confidence            344566667778899999998542  111    1112334 8999998643211                  00011122


Q ss_pred             HHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCCCCCCcEEEEEec
Q 039338          239 VMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVAG  318 (493)
Q Consensus       239 ~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~G  318 (493)
                      .+     +..+.+.+|.++++|+...+.+.+ ++++.+++.+++||+|...+.+........+++++++++. ++|+++|
T Consensus       128 ~~-----~~~~~~~~~~~i~~s~~~~~~~~~-~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~G  200 (365)
T cd03807         128 RL-----RRLLSSFIPLIVANSAAAAEYHQA-IGYPPKKIVVIPNGVDTERFSPDLDARARLREELGLPEDT-FLIGIVA  200 (365)
T ss_pred             HH-----HHHhccccCeEEeccHHHHHHHHH-cCCChhheeEeCCCcCHHhcCCcccchHHHHHhcCCCCCC-eEEEEec
Confidence            22     224567789999999999999987 4778889999999999988776666566677888888766 7889999


Q ss_pred             ccccccChHHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhh-------hcCcEEEecCCCHHHHHHHHHHcCEEEeCCCC
Q 039338          319 RLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKD-------FGHQVLVMGSMSPAELRAFYNAIDIFVNPTLR  391 (493)
Q Consensus       319 r~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~-------l~~~V~~~g~~~~~~~~~~~~~adv~v~ps~~  391 (493)
                      ++.+.||++.+++++..+.+++++++++++|.++.....++       +.++|.+.|..  +++.++|+.||++++||..
T Consensus       201 ~~~~~K~~~~li~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~~--~~~~~~~~~adi~v~ps~~  278 (365)
T cd03807         201 RLHPQKDHATLLRAAALLLKKFPNARLLLVGDGPDRANLELLALKELGLEDKVILLGER--SDVPALLNALDVFVLSSLS  278 (365)
T ss_pred             ccchhcCHHHHHHHHHHHHHhCCCeEEEEecCCcchhHHHHHHHHhcCCCceEEEcccc--ccHHHHHHhCCEEEeCCcc
Confidence            99999999999999999988888999999998875543322       22689999976  6899999999999999975


Q ss_pred             CCCCChHHHHHHHcCCcEEecCCCCCccceeeeCcceEEECC-CHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHhcCH
Q 039338          392 PQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAP-NVESLHKTLEAAVSEGPMRLAQRGEACRQYAASMFTA  470 (493)
Q Consensus       392 ~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~~-d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~  470 (493)
                       ||+|++++|||+||+|||+++.++.. +++.+  +|+++++ |+++++++|.+++++ ++.+.++++++++.++++|||
T Consensus       279 -e~~~~~~~Ea~a~g~PvI~~~~~~~~-e~~~~--~g~~~~~~~~~~l~~~i~~l~~~-~~~~~~~~~~~~~~~~~~~s~  353 (365)
T cd03807         279 -EGFPNVLLEAMACGLPVVATDVGDNA-ELVGD--TGFLVPPGDPEALAEAIEALLAD-PALRQALGEAARERIEENFSI  353 (365)
T ss_pred             -ccCCcHHHHHHhcCCCEEEcCCCChH-HHhhc--CCEEeCCCCHHHHHHHHHHHHhC-hHHHHHHHHHHHHHHHHhCCH
Confidence             99999999999999999999999988 77766  8999998 999999999999999 899999999999999999999


Q ss_pred             HHHHHHHHHHHH
Q 039338          471 NKMALAYERLFL  482 (493)
Q Consensus       471 ~~~~~~~~~~~~  482 (493)
                      +++++++.++|+
T Consensus       354 ~~~~~~~~~~y~  365 (365)
T cd03807         354 EAMVEAYEELYR  365 (365)
T ss_pred             HHHHHHHHHHhC
Confidence            999999999984

WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.

>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known

Probab=100.00  E-value=3.3e-37  Score=301.65  Aligned_cols=362  Identities=30%  Similarity=0.435  Sum_probs=274.0

Q ss_pred             EEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCCCccccc
Q 039338           85 KIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEADKWRYS  164 (493)
Q Consensus        85 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (493)
                      ||++++..+|+  ..||...++..++++|.+.||+|++++.....  ..........     ..................
T Consensus         1 kI~ii~~~~~~--~~~G~~~~~~~l~~~L~~~g~~v~i~~~~~~~--~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~   71 (374)
T cd03801           1 KILLVTPEYPP--SVGGAERHVLELARALAARGHEVTVLTPGDGG--LPDEEEVGGI-----VVVRPPPLLRVRRLLLLL   71 (374)
T ss_pred             CeeEEecccCC--ccCcHhHHHHHHHHHHHhcCceEEEEecCCCC--CCceeeecCc-----ceecCCcccccchhHHHH
Confidence            69999998865  37999999999999999999999999987665  2111110000     000000000011111222


Q ss_pred             cchHHHHHHhcCCCCcEEEeCccchhHH-----hhhccCcEEEEeccchhhhhhhhhhhhhhcCCCCccchHhHhHHHHH
Q 039338          165 KGWEQFDEENQREPFDVVHSESVALPHW-----LARNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQGV  239 (493)
Q Consensus       165 ~~~~~~~~~~~~~~~DiI~~~~~~~~~~-----~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (493)
                      .....+.+.+++.++|+||+++......     ...+.| ++.++|+.........                  ..... 
T Consensus        72 ~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~~~~~-~i~~~h~~~~~~~~~~------------------~~~~~-  131 (374)
T cd03801          72 LLALRLRRLLRRERFDVVHAHDWLALLAAALAARLLGIP-LVLTVHGLEFGRPGNE------------------LGLLL-  131 (374)
T ss_pred             HHHHHHHHHhhhcCCcEEEEechhHHHHHHHHHHhcCCc-EEEEeccchhhccccc------------------hhHHH-
Confidence            3334555566678999999997643332     223446 9999999765332111                  00001 


Q ss_pred             HHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCCCCCCcEEEEEecc
Q 039338          240 MLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVAGR  319 (493)
Q Consensus       240 ~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Gr  319 (493)
                      ......+...++.+|.++++|+.+.+.+.+.++.+..++.++|||+|...+.+..   ...+.......+. ++++++|+
T Consensus       132 ~~~~~~~~~~~~~~d~~i~~s~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~---~~~~~~~~~~~~~-~~i~~~g~  207 (374)
T cd03801         132 KLARALERRALRRADRIIAVSEATREELRELGGVPPEKITVIPNGVDTERFRPAP---RAARRRLGIPEDE-PVILFVGR  207 (374)
T ss_pred             HHHHHHHHHHHHhCCEEEEecHHHHHHHHhcCCCCCCcEEEecCcccccccCccc---hHHHhhcCCcCCC-eEEEEecc
Confidence            1111123366789999999999999999997766557999999999988775432   2222333333343 78999999


Q ss_pred             cccccChHHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhh------hcCcEEEecCCCHHHHHHHHHHcCEEEeCCCCCC
Q 039338          320 LVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKD------FGHQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQ  393 (493)
Q Consensus       320 ~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~------l~~~V~~~g~~~~~~~~~~~~~adv~v~ps~~~e  393 (493)
                      +...||++.+++++..+.+++++++++++|.++..+.+++      ..++|.+.|+++++++.++|+.||++++|+.. |
T Consensus       208 ~~~~k~~~~~i~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~di~i~~~~~-~  286 (374)
T cd03801         208 LVPRKGVDLLLEALAKLRKEYPDVRLVIVGDGPLREELEALAAELGLGDRVTFLGFVPDEDLPALYAAADVFVLPSLY-E  286 (374)
T ss_pred             hhhhcCHHHHHHHHHHHhhhcCCeEEEEEeCcHHHHHHHHHHHHhCCCcceEEEeccChhhHHHHHHhcCEEEecchh-c
Confidence            9999999999999999998888999999998877666654      23899999999999999999999999999965 9


Q ss_pred             CCChHHHHHHHcCCcEEecCCCCCccceeeeCcceEEECC-CHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHhcCHHH
Q 039338          394 GLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAP-NVESLHKTLEAAVSEGPMRLAQRGEACRQYAASMFTANK  472 (493)
Q Consensus       394 g~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~~-d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~  472 (493)
                      ++|++++|||++|+|||+++.++.. +++.++.+|+++++ |+++++++|.+++.+ ++.+.++++++++.+.+.|+|++
T Consensus       287 ~~~~~~~Ea~~~g~pvI~~~~~~~~-~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  364 (374)
T cd03801         287 GFGLVLLEAMAAGLPVVASDVGGIP-EVVEDGETGLLVPPGDPEALAEAILRLLDD-PELRRRLGEAARERVAERFSWDR  364 (374)
T ss_pred             cccchHHHHHHcCCcEEEeCCCChh-HHhcCCcceEEeCCCCHHHHHHHHHHHHcC-hHHHHHHHHHHHHHHHHhcCHHH
Confidence            9999999999999999999999988 88888999999999 899999999999999 89999999999989999999999


Q ss_pred             HHHHHHHHHH
Q 039338          473 MALAYERLFL  482 (493)
Q Consensus       473 ~~~~~~~~~~  482 (493)
                      +++++.++|+
T Consensus       365 ~~~~~~~~~~  374 (374)
T cd03801         365 VAARTEEVYY  374 (374)
T ss_pred             HHHHHHHhhC
Confidence            9999999873

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.

>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=8.9e-37  Score=299.70  Aligned_cols=359  Identities=23%  Similarity=0.359  Sum_probs=265.0

Q ss_pred             EEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEe-ecCCCCcccc
Q 039338           85 KIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHF-HEGEADKWRY  163 (493)
Q Consensus        85 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  163 (493)
                      ||++++..|||  ..||.+..+..++++|.++||+|++++.....  ........       ....... ..........
T Consensus         1 kil~~~~~~~p--~~~G~~~~~~~l~~~L~~~g~~v~v~~~~~~~--~~~~~~~~-------~~~~~~~~~~~~~~~~~~   69 (374)
T cd03817           1 KIGIFTDTYLP--QVNGVATSIRRLAEELEKRGHEVYVVAPSYPG--APEEEEVV-------VVRPFRVPTFKYPDFRLP   69 (374)
T ss_pred             CeeEeehhccC--CCCCeehHHHHHHHHHHHcCCeEEEEeCCCCC--CCcccccc-------cccccccccchhhhhhcc
Confidence            69999999876  77999999999999999999999999987655  11111100       0000000 0001111112


Q ss_pred             ccchHHHHHHhcCCCCcEEEeCccchhHH------hhhccCcEEEEeccchhhhhhhhhhhhhhcCCCCccchHhHhHHH
Q 039338          164 SKGWEQFDEENQREPFDVVHSESVALPHW------LARNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQ  237 (493)
Q Consensus       164 ~~~~~~~~~~~~~~~~DiI~~~~~~~~~~------~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (493)
                      ......+...+++.+||+||+++......      ...++| ++.++|+.+....+.....               ....
T Consensus        70 ~~~~~~~~~~~~~~~~Div~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~~~~~~---------------~~~~  133 (374)
T cd03817          70 LPIPRALIIILKELGPDIVHTHTPFSLGLLGLRVARKLGIP-VVATYHTMYEDYTHYVPLG---------------RLLA  133 (374)
T ss_pred             ccHHHHHHHHHhhcCCCEEEECCchhhhhHHHHHHHHcCCC-EEEEecCCHHHHHHHHhcc---------------cchh
Confidence            22334444556688999999987532211      123456 8999998654222111000               0001


Q ss_pred             HHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCCCCCCcEEEEEe
Q 039338          238 GVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVA  317 (493)
Q Consensus       238 ~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~  317 (493)
                      ........+...++.+|.++++|+..++.+.+ ++. ..++.+++||+|...+.+...  ...++++++..++ ++|+++
T Consensus       134 ~~~~~~~~~~~~~~~~d~i~~~s~~~~~~~~~-~~~-~~~~~vi~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~~i~~~  208 (374)
T cd03817         134 RAVVRRKLSRRFYNRCDAVIAPSEKIADLLRE-YGV-KRPIEVIPTGIDLDRFEPVDG--DDERRKLGIPEDE-PVLLYV  208 (374)
T ss_pred             HHHHHHHHHHHHhhhCCEEEeccHHHHHHHHh-cCC-CCceEEcCCccchhccCccch--hHHHHhcCCCCCC-eEEEEE
Confidence            11111022346788999999999999999887 454 356999999999887765433  2235556665554 788999


Q ss_pred             cccccccChHHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhhh------cCcEEEecCCCHHHHHHHHHHcCEEEeCCCC
Q 039338          318 GRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDF------GHQVLVMGSMSPAELRAFYNAIDIFVNPTLR  391 (493)
Q Consensus       318 Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~l------~~~V~~~g~~~~~~~~~~~~~adv~v~ps~~  391 (493)
                      |++.+.||++.+++++..+.+++++++++++|+|+..+.++++      .++|.++|+++++++.++|+.||++++|+. 
T Consensus       209 G~~~~~k~~~~l~~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~l~~s~-  287 (374)
T cd03817         209 GRLAKEKNIDFLIRAFARLLKEEPDVKLVIVGDGPEREELEELARELGLADRVIFTGFVPREELPDYYKAADLFVFAST-  287 (374)
T ss_pred             eeeecccCHHHHHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHHcCCCCcEEEeccCChHHHHHHHHHcCEEEeccc-
Confidence            9999999999999999999988889999999998876665543      378999999999999999999999999996 


Q ss_pred             CCCCChHHHHHHHcCCcEEecCCCCCccceeeeCcceEEECC-CHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHhcCH
Q 039338          392 PQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAP-NVESLHKTLEAAVSEGPMRLAQRGEACRQYAASMFTA  470 (493)
Q Consensus       392 ~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~~-d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~  470 (493)
                      .|++|++++|||++|+|||+++.++.. +++.++.+|+++++ +. +++++|.+++++ ++.+++|++++++.+++. + 
T Consensus       288 ~e~~~~~~~Ea~~~g~PvI~~~~~~~~-~~i~~~~~g~~~~~~~~-~~~~~i~~l~~~-~~~~~~~~~~~~~~~~~~-~-  362 (374)
T cd03817         288 TETQGLVLLEAMAAGLPVVAVDAPGLP-DLVADGENGFLFPPGDE-ALAEALLRLLQD-PELRRRLSKNAEESAEKF-S-  362 (374)
T ss_pred             ccCcChHHHHHHHcCCcEEEeCCCChh-hheecCceeEEeCCCCH-HHHHHHHHHHhC-hHHHHHHHHHHHHHHHHH-H-
Confidence            599999999999999999999999988 89999999999998 55 999999999999 888899999999999874 3 


Q ss_pred             HHHHHHHHHHHHH
Q 039338          471 NKMALAYERLFLC  483 (493)
Q Consensus       471 ~~~~~~~~~~~~~  483 (493)
                        .+++++++|++
T Consensus       363 --~~~~~~~~~~~  373 (374)
T cd03817         363 --FAKKVEKLYEE  373 (374)
T ss_pred             --HHHHHHHHHhc
Confidence              66777777765

UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.

>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=2.8e-37  Score=303.21  Aligned_cols=359  Identities=23%  Similarity=0.258  Sum_probs=259.8

Q ss_pred             EEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCCCccccc
Q 039338           85 KIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEADKWRYS  164 (493)
Q Consensus        85 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (493)
                      ||+++++.+++  ..||+++++..++++|++.||+|++++.....  .........   .....................
T Consensus         1 kIl~i~~~~~~--~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~--~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~   73 (375)
T cd03821           1 KILHVIPSFDP--KYGGPVRVVLNLSKALAKLGHEVTVATTDAGG--DPLLVALNG---VPVKLFSINVAYGLNLARYLF   73 (375)
T ss_pred             CeEEEcCCCCc--ccCCeehHHHHHHHHHHhcCCcEEEEecCCCC--ccchhhccC---ceeeecccchhhhhhhhhhcc
Confidence            69999998864  88999999999999999999999999987655  211111000   000000000000000000111


Q ss_pred             cchHHHHHHhcCCCCcEEEeCccch-h----HHh--hhccCcEEEEeccchhhhhhhhhhhhhhcCCCCccchHhHhHHH
Q 039338          165 KGWEQFDEENQREPFDVVHSESVAL-P----HWL--ARNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQ  237 (493)
Q Consensus       165 ~~~~~~~~~~~~~~~DiI~~~~~~~-~----~~~--~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (493)
                      .............++|+||+++... .    ...  ..+.| ++++.|+.......                  ....+.
T Consensus        74 ~~~~~~~~~~~~~~~dii~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~------------------~~~~~~  134 (375)
T cd03821          74 PPSLLAWLRLNIREADIVHVHGLWSYPSLAAARAARKYGIP-YVVSPHGMLDPWAL------------------PHKALK  134 (375)
T ss_pred             ChhHHHHHHHhCCCCCEEEEecccchHHHHHHHHHHHhCCC-EEEEcccccccccc------------------ccchhh
Confidence            1111222223456899999987421 1    111  13456 89999985432110                  001222


Q ss_pred             HHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCCCCCCcEEEEEe
Q 039338          238 GVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVA  317 (493)
Q Consensus       238 ~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~  317 (493)
                      ..+.....+...++.++.+++.|+.........  .+..++.++|||+|.+.+.+......  ++.++.+.++ ++++++
T Consensus       135 ~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~~~--~~~~~~~vi~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~i~~~  209 (375)
T cd03821         135 KRLAWFLFERRLLQAAAAVHATSEQEAAEIRRL--GLKAPIAVIPNGVDIPPFAALPSRGR--RRKFPILPDK-RIILFL  209 (375)
T ss_pred             hHHHHHHHHHHHHhcCCEEEECCHHHHHHHHhh--CCcccEEEcCCCcChhccCcchhhhh--hhhccCCCCC-cEEEEE
Confidence            223333334566788999999998877776653  35678999999999988765443222  5556666555 788999


Q ss_pred             cccccccChHHHHHHHHHHHhhCCCeEEEEEeCCCc--HHHHh----hh--cCcEEEecCCCHHHHHHHHHHcCEEEeCC
Q 039338          318 GRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPW--EQRYK----DF--GHQVLVMGSMSPAELRAFYNAIDIFVNPT  389 (493)
Q Consensus       318 Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~--~~~~~----~l--~~~V~~~g~~~~~~~~~~~~~adv~v~ps  389 (493)
                      |++.+.||++.+++++..+.+++++++++++|.+..  ....+    ++  .++|.|+|+++++++.++|+.||++++||
T Consensus       210 G~~~~~K~~~~li~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~adv~v~ps  289 (375)
T cd03821         210 GRLHPKKGLDLLIEAFAKLAERFPDWHLVIAGPDEGGYRAELKQIAAALGLEDRVTFTGMLYGEDKAAALADADLFVLPS  289 (375)
T ss_pred             eCcchhcCHHHHHHHHHHhhhhcCCeEEEEECCCCcchHHHHHHHHHhcCccceEEEcCCCChHHHHHHHhhCCEEEecc
Confidence            999999999999999999998889999999997643  22222    22  37899999999999999999999999999


Q ss_pred             CCCCCCChHHHHHHHcCCcEEecCCCCCccceeeeCcceEEECCCHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHhcC
Q 039338          390 LRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAPNVESLHKTLEAAVSEGPMRLAQRGEACRQYAASMFT  469 (493)
Q Consensus       390 ~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs  469 (493)
                      .. ||+|++++|||++|+|||+++.++.. +++.+ ..|++++.++++++++|.+++++ ++.++++++++++.+.++|+
T Consensus       290 ~~-e~~~~~~~Eama~G~PvI~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~i~~l~~~-~~~~~~~~~~~~~~~~~~~s  365 (375)
T cd03821         290 HS-ENFGIVVAEALACGTPVVTTDKVPWQ-ELIEY-GCGWVVDDDVDALAAALRRALEL-PQRLKAMGENGRALVEERFS  365 (375)
T ss_pred             cc-CCCCcHHHHHHhcCCCEEEcCCCCHH-HHhhc-CceEEeCCChHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhcC
Confidence            75 99999999999999999999999988 77777 88999988779999999999999 79999999999999888999


Q ss_pred             HHHHHHHHH
Q 039338          470 ANKMALAYE  478 (493)
Q Consensus       470 ~~~~~~~~~  478 (493)
                      |+.++++++
T Consensus       366 ~~~~~~~~~  374 (375)
T cd03821         366 WTAIAQQLL  374 (375)
T ss_pred             HHHHHHHhh
Confidence            999999886

Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.

>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria

Probab=100.00  E-value=1.7e-37  Score=303.39  Aligned_cols=337  Identities=25%  Similarity=0.342  Sum_probs=257.4

Q ss_pred             EEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCCCccccc
Q 039338           85 KIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEADKWRYS  164 (493)
Q Consensus        85 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (493)
                      ||++++..||+     |.+.++.++++.|.++||+|++++.....  .......     .......+...   ...+...
T Consensus         1 ki~~~~~~~~~-----~~~~~~~~~~~~L~~~g~~v~v~~~~~~~--~~~~~~~-----~~~~~~~~~~~---~~~~~~~   65 (355)
T cd03799           1 KIAYLVKEFPR-----LSETFILREILALEAAGHEVEIFSLRPPE--DTLVHPE-----DRAELARTRYL---ARSLALL   65 (355)
T ss_pred             CEEEECCCCCC-----cchHHHHHHHHHHHhCCCeEEEEEecCcc--ccccccc-----ccccccchHHH---HHHHHHH
Confidence            69999999864     36889999999999999999999987655  2111100     00000011111   1112222


Q ss_pred             cchHHHHHHhcCCCCcEEEeCccc---hhHHhhh---ccCcEEEEeccchhhhhhhhhhhhhhcCCCCccchHhHhHHHH
Q 039338          165 KGWEQFDEENQREPFDVVHSESVA---LPHWLAR---NVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQG  238 (493)
Q Consensus       165 ~~~~~~~~~~~~~~~DiI~~~~~~---~~~~~~~---~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (493)
                      .....+.+.+++.++|+||+|...   ...++..   +.+ ++.+.|+.......                     ..  
T Consensus        66 ~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~---------------------~~--  121 (355)
T cd03799          66 AQALVLARELRRLGIDHIHAHFGTTPATVAMLASRLGGIP-YSFTAHGKDIFRSP---------------------DA--  121 (355)
T ss_pred             HHHHHHHHHHHhcCCCEEEECCCCchHHHHHHHHHhcCCC-EEEEEecccccccC---------------------ch--
Confidence            222334444457899999998652   2222222   345 88888864321100                     00  


Q ss_pred             HHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCCCCCCcEEEEEec
Q 039338          239 VMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVAG  318 (493)
Q Consensus       239 ~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~G  318 (493)
                           ..+...++.+|.++++|+.+++.+.+.++.+..++.+++||+|.+.+.+...          ...++++.|+++|
T Consensus       122 -----~~~~~~~~~~~~vi~~s~~~~~~l~~~~~~~~~~~~vi~~~~d~~~~~~~~~----------~~~~~~~~i~~~g  186 (355)
T cd03799         122 -----IDLDEKLARADFVVAISEYNRQQLIRLLGCDPDKIHVVHCGVDLERFPPRPP----------PPPGEPLRILSVG  186 (355)
T ss_pred             -----HHHHHHHhhCCEEEECCHHHHHHHHHhcCCCcccEEEEeCCcCHHHcCCccc----------cccCCCeEEEEEe
Confidence                 1123557889999999999999999976778889999999999887765430          0123347889999


Q ss_pred             ccccccChHHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhhh------cCcEEEecCCCHHHHHHHHHHcCEEEeCCCCC
Q 039338          319 RLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDF------GHQVLVMGSMSPAELRAFYNAIDIFVNPTLRP  392 (493)
Q Consensus       319 r~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~l------~~~V~~~g~~~~~~~~~~~~~adv~v~ps~~~  392 (493)
                      ++.+.||++.+++++..+.+++++++++++|.++..+.+++.      .++|.+.|+++++++.++|++||++++||..+
T Consensus       187 ~~~~~k~~~~l~~~~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~l~~~~~~adi~l~~s~~~  266 (355)
T cd03799         187 RLVEKKGLDYLLEALALLKDRGIDFRLDIVGDGPLRDELEALIAELGLEDRVTLLGAKSQEEVRELLRAADLFVLPSVTA  266 (355)
T ss_pred             eeccccCHHHHHHHHHHHhhcCCCeEEEEEECCccHHHHHHHHHHcCCCCeEEECCcCChHHHHHHHHhCCEEEecceec
Confidence            999999999999999999888889999999998876655442      37899999999999999999999999999643


Q ss_pred             -----CCCChHHHHHHHcCCcEEecCCCCCccceeeeCcceEEECC-CHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHH
Q 039338          393 -----QGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAP-NVESLHKTLEAAVSEGPMRLAQRGEACRQYAAS  466 (493)
Q Consensus       393 -----eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~~-d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~  466 (493)
                           ||+|++++|||++|+|||+++.++.+ +++.++.+|+++++ |+++++++|.+++++ ++.+.++++++++.+++
T Consensus       267 ~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~-~~i~~~~~g~~~~~~~~~~l~~~i~~~~~~-~~~~~~~~~~a~~~~~~  344 (355)
T cd03799         267 ADGDREGLPVVLMEAMAMGLPVISTDVSGIP-ELVEDGETGLLVPPGDPEALADAIERLLDD-PELRREMGEAGRARVEE  344 (355)
T ss_pred             CCCCccCccHHHHHHHHcCCCEEecCCCCcc-hhhhCCCceEEeCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHH
Confidence                 99999999999999999999999988 89988889999998 999999999999999 88899999999999999


Q ss_pred             hcCHHHHHHHH
Q 039338          467 MFTANKMALAY  477 (493)
Q Consensus       467 ~fs~~~~~~~~  477 (493)
                      .|||+..++++
T Consensus       345 ~~s~~~~~~~l  355 (355)
T cd03799         345 EFDIRKQAARL  355 (355)
T ss_pred             hcCHHHHhhcC
Confidence            99999998763

amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.

>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=4.6e-37  Score=301.30  Aligned_cols=347  Identities=21%  Similarity=0.225  Sum_probs=246.6

Q ss_pred             EEEEEec-cCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCC-Ccc-
Q 039338           85 KIAVFSR-KWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEA-DKW-  161 (493)
Q Consensus        85 kIl~v~~-~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-  161 (493)
                      ||++++. .+|+  ..||+++++.+++++|.++||+|+|++.....  ......        .....+....... ... 
T Consensus         1 ~i~~i~~~~~~~--~~gG~~~~~~~la~~L~~~g~~v~v~~~~~~~--~~~~~~--------~~~i~~~~~~~~~~~~~~   68 (363)
T cd04955           1 KIAIIGTRGIPA--KYGGFETFVEELAPRLVARGHEVTVYCRSPYP--KQKETE--------YNGVRLIHIPAPEIGGLG   68 (363)
T ss_pred             CeEEEecCcCCc--ccCcHHHHHHHHHHHHHhcCCCEEEEEccCCC--CCcccc--------cCCceEEEcCCCCccchh
Confidence            6899966 4665  78999999999999999999999999986554  111111        1111122211111 111 


Q ss_pred             ccccchHHHHHHh-cCCCCcEEEeCccch--hHHhh--hccCcEEEEeccchhhhhhhhhhhhhhcCCCCccchHhHhHH
Q 039338          162 RYSKGWEQFDEEN-QREPFDVVHSESVAL--PHWLA--RNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSL  236 (493)
Q Consensus       162 ~~~~~~~~~~~~~-~~~~~DiI~~~~~~~--~~~~~--~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (493)
                      .....+..+.... .+.++|+||..++..  ...+.  .+.| ++++.|+..+....       .            ...
T Consensus        69 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-~v~~~h~~~~~~~~-------~------------~~~  128 (363)
T cd04955          69 TIIYDILAILHALFVKRDIDHVHALGPAIAPFLPLLRLKGKK-VVVNMDGLEWKRAK-------W------------GRP  128 (363)
T ss_pred             hhHHHHHHHHHHHhccCCeEEEEecCccHHHHHHHHHhcCCC-EEEEccCcceeecc-------c------------ccc
Confidence            0111111222222 345666666655432  11112  2345 99999985322100       0            000


Q ss_pred             HHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCCCCCCcEEEEE
Q 039338          237 QGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGV  316 (493)
Q Consensus       237 ~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~  316 (493)
                      ...+.+. .+...++.+|.++++|+..++.+.+.+|.+  . .+||||+|...+.+    ....+++++++++.  .+++
T Consensus       129 ~~~~~~~-~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~--~-~~i~ngv~~~~~~~----~~~~~~~~~~~~~~--~i~~  198 (363)
T cd04955         129 AKRYLKF-GEKLAVKFADRLIADSPGIKEYLKEKYGRD--S-TYIPYGADHVVSSE----EDEILKKYGLEPGR--YYLL  198 (363)
T ss_pred             hhHHHHH-HHHHHHhhccEEEeCCHHHHHHHHHhcCCC--C-eeeCCCcChhhcch----hhhhHHhcCCCCCc--EEEE
Confidence            0111111 123557889999999999999998777753  2 89999999876544    12334555655443  4679


Q ss_pred             ecccccccChHHHHHHHHHHHhhCCCeEEEEEeCCCcHH----HHh-h--hcCcEEEecCCCHHHHHHHHHHcCEEEeCC
Q 039338          317 AGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQ----RYK-D--FGHQVLVMGSMSPAELRAFYNAIDIFVNPT  389 (493)
Q Consensus       317 ~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~----~~~-~--l~~~V~~~g~~~~~~~~~~~~~adv~v~ps  389 (493)
                      +||+.+.||++.+++|++++..   +++|+++|+|+...    .++ +  +.++|+|+|+++++++.++|++||++++||
T Consensus       199 ~G~~~~~Kg~~~li~a~~~l~~---~~~l~ivG~~~~~~~~~~~~~~~~~~~~~V~~~g~~~~~~~~~~~~~ad~~v~ps  275 (363)
T cd04955         199 VGRIVPENNIDDLIEAFSKSNS---GKKLVIVGNADHNTPYGKLLKEKAAADPRIIFVGPIYDQELLELLRYAALFYLHG  275 (363)
T ss_pred             EecccccCCHHHHHHHHHhhcc---CceEEEEcCCCCcchHHHHHHHHhCCCCcEEEccccChHHHHHHHHhCCEEEeCC
Confidence            9999999999999999998864   78999999974332    222 1  238999999999999999999999999999


Q ss_pred             CCCCCCChHHHHHHHcCCcEEecCCCCCccceeeeCcceEEECC-CHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHhc
Q 039338          390 LRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAP-NVESLHKTLEAAVSEGPMRLAQRGEACRQYAASMF  468 (493)
Q Consensus       390 ~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~~-d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~f  468 (493)
                      ...|++|++++|||+||+|||+++.++.. |++.+  +|.++++ |.  ++++|.+++++ ++.+.++++++++.+.+.|
T Consensus       276 ~~~e~~~~~~~EAma~G~PvI~s~~~~~~-e~~~~--~g~~~~~~~~--l~~~i~~l~~~-~~~~~~~~~~~~~~~~~~f  349 (363)
T cd04955         276 HSVGGTNPSLLEAMAYGCPVLASDNPFNR-EVLGD--KAIYFKVGDD--LASLLEELEAD-PEEVSAMAKAARERIREKY  349 (363)
T ss_pred             ccCCCCChHHHHHHHcCCCEEEecCCccc-eeecC--CeeEecCchH--HHHHHHHHHhC-HHHHHHHHHHHHHHHHHhC
Confidence            65599999999999999999999999988 77654  7888887 44  99999999999 8899999999999999999


Q ss_pred             CHHHHHHHHHHHHH
Q 039338          469 TANKMALAYERLFL  482 (493)
Q Consensus       469 s~~~~~~~~~~~~~  482 (493)
                      ||+.+++++.++|+
T Consensus       350 s~~~~~~~~~~~y~  363 (363)
T cd04955         350 TWEKIADQYEELYK  363 (363)
T ss_pred             CHHHHHHHHHHHhC
Confidence            99999999999984

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog

>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=3.5e-37  Score=301.08  Aligned_cols=343  Identities=25%  Similarity=0.309  Sum_probs=255.4

Q ss_pred             EEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCC-----CC
Q 039338           85 KIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGE-----AD  159 (493)
Q Consensus        85 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~  159 (493)
                      ||+++++.||+ ...||+++++..++++|.++||+|++++.....  ..........................     ..
T Consensus         1 kIl~i~~~~~~-~~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (359)
T cd03823           1 RILVVNHLYPP-RSVGGAEVVAHDLAEALAKRGHEVAVLTAGEDP--PRQDKEVIGVVVYGRPIDEVLRSALPRDLFHLS   77 (359)
T ss_pred             CeeEEcccCCc-ccccchHHHHHHHHHHHHhcCCceEEEeCCCCC--CCcccccccceeeccccccccCCCchhhhhHHH
Confidence            69999998876 467999999999999999999999999987655  21111100000000000000000000     00


Q ss_pred             ccccccchHHHHHHhcCCCCcEEEeCccch---hH---HhhhccCcEEEEeccchhhhhhhhhhhhhhcCCCCccchHhH
Q 039338          160 KWRYSKGWEQFDEENQREPFDVVHSESVAL---PH---WLARNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFN  233 (493)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~DiI~~~~~~~---~~---~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (493)
                      ..........+.+.+++.+||+||++....   ..   .....+| ++.++|+.+.......                  
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~dii~~~~~~~~~~~~~~~~~~~~~~-~i~~~hd~~~~~~~~~------------------  138 (359)
T cd03823          78 DYDNPAVVAEFARLLEDFRPDVVHFHHLQGLGVSILRAARDRGIP-IVLTLHDYWLICPRQG------------------  138 (359)
T ss_pred             hccCHHHHHHHHHHHHHcCCCEEEECCccchHHHHHHHHHhcCCC-EEEEEeeeeeecchhh------------------
Confidence            011122345566667788999999987421   11   1223456 9999998653221110                  


Q ss_pred             hHHHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCCCCCCcEE
Q 039338          234 KSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLV  313 (493)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~  313 (493)
                                    ......|.++++|+...+.+.+. +.+..++.+++||+|...+.+...         +.+ +++++
T Consensus       139 --------------~~~~~~d~ii~~s~~~~~~~~~~-~~~~~~~~vi~n~~~~~~~~~~~~---------~~~-~~~~~  193 (359)
T cd03823         139 --------------LFKKGGDAVIAPSRFLLDRYVAN-GLFAEKISVIRNGIDLDRAKRPRR---------APP-GGRLR  193 (359)
T ss_pred             --------------hhccCCCEEEEeCHHHHHHHHHc-CCCccceEEecCCcChhhcccccc---------CCC-CCceE
Confidence                          01123399999999999999884 444679999999999987654321         122 33488


Q ss_pred             EEEecccccccChHHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhh---hcCcEEEecCCCHHHHHHHHHHcCEEEeCCC
Q 039338          314 LGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKD---FGHQVLVMGSMSPAELRAFYNAIDIFVNPTL  390 (493)
Q Consensus       314 i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~---l~~~V~~~g~~~~~~~~~~~~~adv~v~ps~  390 (493)
                      |+++|++.+.||++.++++++.+.+  ++++|+++|.++.......   ..++|.++|+++++++.++|++||++++||.
T Consensus       194 i~~~G~~~~~k~~~~li~~~~~l~~--~~~~l~i~G~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~i~ps~  271 (359)
T cd03823         194 FGFIGQLTPHKGVDLLLEAFKRLPR--GDIELVIVGNGLELEEESYELEGDPRVEFLGAYPQEEIDDFYAEIDVLVVPSI  271 (359)
T ss_pred             EEEEecCccccCHHHHHHHHHHHHh--cCcEEEEEcCchhhhHHHHhhcCCCeEEEeCCCCHHHHHHHHHhCCEEEEcCc
Confidence            9999999999999999999999976  6899999998876554433   3489999999999999999999999999997


Q ss_pred             CCCCCChHHHHHHHcCCcEEecCCCCCccceeeeCcceEEECC-CHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHhcC
Q 039338          391 RPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAP-NVESLHKTLEAAVSEGPMRLAQRGEACRQYAASMFT  469 (493)
Q Consensus       391 ~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~~-d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs  469 (493)
                      ..||+|++++|||++|+|||+++.++.. |++.++.+|+++++ |++++++++.+++++ ++.++.+++++++....   
T Consensus       272 ~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~-e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~-~~~~~~~~~~~~~~~~~---  346 (359)
T cd03823         272 WPENFPLVIREALAAGVPVIASDIGGMA-ELVRDGVNGLLFPPGDAEDLAAALERLIDD-PDLLERLRAGIEPPRSI---  346 (359)
T ss_pred             ccCCCChHHHHHHHCCCCEEECCCCCHH-HHhcCCCcEEEECCCCHHHHHHHHHHHHhC-hHHHHHHHHhHHHhhhH---
Confidence            5699999999999999999999999988 88888889999999 999999999999998 89999999998887643   


Q ss_pred             HHHHHHHHHHHHH
Q 039338          470 ANKMALAYERLFL  482 (493)
Q Consensus       470 ~~~~~~~~~~~~~  482 (493)
                       +.++++++++|+
T Consensus       347 -~~~~~~~~~~~~  358 (359)
T cd03823         347 -EDQAEEYLKLYR  358 (359)
T ss_pred             -HHHHHHHHHHhh
Confidence             899999999886

ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).

>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional

Probab=100.00  E-value=1.7e-37  Score=302.87  Aligned_cols=338  Identities=16%  Similarity=0.163  Sum_probs=240.4

Q ss_pred             eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhC--CCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCCCcc
Q 039338           84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARR--GHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEADKW  161 (493)
Q Consensus        84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~--G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (493)
                      |||++++..+|   ..||+++++.+++++|.++  ||+|.+++.....  ..  ......... ........     ...
T Consensus         1 mkI~~~~~~~~---~~GG~e~~~~~l~~~L~~~~~g~~v~v~~~~~~~--~~--~~~~~~~~~-~~~~~~~~-----~~~   67 (359)
T PRK09922          1 MKIAFIGEAVS---GFGGMETVISNVINTFEESKINCEMFFFCRNDKM--DK--AWLKEIKYA-QSFSNIKL-----SFL   67 (359)
T ss_pred             CeeEEeccccc---CCCchhHHHHHHHHHhhhcCcceeEEEEecCCCC--Ch--HHHHhcchh-cccccchh-----hhh
Confidence            89999998653   5699999999999999999  8999998875543  11  000000000 00000100     111


Q ss_pred             ccccchHHHHHHhcCCCCcEEEeCccchhH--Hhh-h--ccCc-EEEEeccchhhhhhhhhhhhhhcCCCCccchHhHhH
Q 039338          162 RYSKGWEQFDEENQREPFDVVHSESVALPH--WLA-R--NVTN-LAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKS  235 (493)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~DiI~~~~~~~~~--~~~-~--~~p~-~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (493)
                      ........+.+.+++.+||+||+|+.....  .+. +  +.|. ++.+.|.....                        .
T Consensus        68 ~~~~~~~~l~~~l~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~------------------------~  123 (359)
T PRK09922         68 RRAKHVYNFSKWLKETQPDIVICIDVISCLYANKARKKSGKQFKIFSWPHFSLDH------------------------K  123 (359)
T ss_pred             cccHHHHHHHHHHHhcCCCEEEEcCHHHHHHHHHHHHHhCCCCeEEEEecCcccc------------------------c
Confidence            112334666777888999999999753211  111 1  2221 34444531100                        0


Q ss_pred             HHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCCCCCCcEEEE
Q 039338          236 LQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLG  315 (493)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~  315 (493)
                      ....       ...+..+|.++++|+..++.+.+ ++++.+++.+|+||+|.+.+.....           ..+++++++
T Consensus       124 ~~~~-------~~~~~~~d~~i~~S~~~~~~~~~-~~~~~~ki~vi~N~id~~~~~~~~~-----------~~~~~~~i~  184 (359)
T PRK09922        124 KHAE-------CKKITCADYHLAISSGIKEQMMA-RGISAQRISVIYNPVEIKTIIIPPP-----------ERDKPAVFL  184 (359)
T ss_pred             chhh-------hhhhhcCCEEEEcCHHHHHHHHH-cCCCHHHEEEEcCCCCHHHccCCCc-----------ccCCCcEEE
Confidence            0000       01136799999999999999987 6888889999999999654432111           012237788


Q ss_pred             Eecccc--cccChHHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhhh------cCcEEEecCCC--HHHHHHHHHHcCEE
Q 039338          316 VAGRLV--KDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDF------GHQVLVMGSMS--PAELRAFYNAIDIF  385 (493)
Q Consensus       316 ~~Gr~~--~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~l------~~~V~~~g~~~--~~~~~~~~~~adv~  385 (493)
                      ++||+.  +.||++.+++++..+.   ++++|+++|+|+..+.++++      .++|.|+|+++  .+++.++|+.+|++
T Consensus       185 ~~Grl~~~~~k~~~~l~~a~~~~~---~~~~l~ivG~g~~~~~l~~~~~~~~l~~~v~f~G~~~~~~~~~~~~~~~~d~~  261 (359)
T PRK09922        185 YVGRLKFEGQKNVKELFDGLSQTT---GEWQLHIIGDGSDFEKCKAYSRELGIEQRIIWHGWQSQPWEVVQQKIKNVSAL  261 (359)
T ss_pred             EEEEEecccCcCHHHHHHHHHhhC---CCeEEEEEeCCccHHHHHHHHHHcCCCCeEEEecccCCcHHHHHHHHhcCcEE
Confidence            999986  4699999999999874   37999999999887766553      27899999884  47899999999999


Q ss_pred             EeCCCCCCCCChHHHHHHHcCCcEEecC-CCCCccceeeeCcceEEECC-CHHHHHHHHHHHHHcCcHHHHHHHHHHHHH
Q 039338          386 VNPTLRPQGLDLTLMEAMMSGKPVMASR-FPSIKGTIVVDDEFGFMFAP-NVESLHKTLEAAVSEGPMRLAQRGEACRQY  463 (493)
Q Consensus       386 v~ps~~~eg~~~~~~EAm~~G~PvI~s~-~~~~~~e~v~~~~~G~~~~~-d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~  463 (493)
                      |+||.. ||||++++|||+||+|||+++ .+|.. |++.++.+|+++++ |+++++++|.+++++ ++.+.   ..+...
T Consensus       262 v~~s~~-Egf~~~~lEAma~G~Pvv~s~~~~g~~-eiv~~~~~G~lv~~~d~~~la~~i~~l~~~-~~~~~---~~~~~~  335 (359)
T PRK09922        262 LLTSKF-EGFPMTLLEAMSYGIPCISSDCMSGPR-DIIKPGLNGELYTPGNIDEFVGKLNKVISG-EVKYQ---HDAIPN  335 (359)
T ss_pred             EECCcc-cCcChHHHHHHHcCCCEEEeCCCCChH-HHccCCCceEEECCCCHHHHHHHHHHHHhC-cccCC---HHHHHH
Confidence            999964 999999999999999999999 78877 89999999999998 999999999999999 65331   222222


Q ss_pred             HHHhcCHHHHHHHHHHHHHHHhh
Q 039338          464 AASMFTANKMALAYERLFLCIKN  486 (493)
Q Consensus       464 ~~~~fs~~~~~~~~~~~~~~i~~  486 (493)
                      ...+|+.++..+++.++|..+++
T Consensus       336 ~~~~~~~~~~~~~~~~~~~~~~~  358 (359)
T PRK09922        336 SIERFYEVLYFKNLNNALFSKLQ  358 (359)
T ss_pred             HHHHhhHHHHHHHHHHHHHHHhc
Confidence            33447889999999999988765

>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=1.1e-36  Score=301.67  Aligned_cols=358  Identities=16%  Similarity=0.189  Sum_probs=244.8

Q ss_pred             CceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCC-Cc
Q 039338           82 FTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEA-DK  160 (493)
Q Consensus        82 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  160 (493)
                      ++.||++++.      ..+|.+.++..+++.|+++||+|++++.....  .. .+.      .......++...... ..
T Consensus         2 ~~~~~~~~~~------~~~~~~~R~~~~a~~L~~~G~~V~ii~~~~~~--~~-~~~------~~~~~v~~~~~~~~~~~~   66 (415)
T cd03816           2 KRKRVCVLVL------GDIGRSPRMQYHALSLAKHGWKVDLVGYLETP--PH-DEI------LSNPNITIHPLPPPPQRL   66 (415)
T ss_pred             CccEEEEEEe------cccCCCHHHHHHHHHHHhcCceEEEEEecCCC--CC-HHH------hcCCCEEEEECCCCcccc
Confidence            4567888886      34677778899999999999999999976533  11 110      001111222222211 01


Q ss_pred             cccc-------c----chHHHHHHhcCCCCcEEEeCccc-h----hHHh-h--hccCcEEEEeccchhhhhhhhhhhhhh
Q 039338          161 WRYS-------K----GWEQFDEENQREPFDVVHSESVA-L----PHWL-A--RNVTNLAVSWHGIALESLQSGIFQDLT  221 (493)
Q Consensus       161 ~~~~-------~----~~~~~~~~~~~~~~DiI~~~~~~-~----~~~~-~--~~~p~~v~~~h~~~~~~~~~~~~~~~~  221 (493)
                      ....       .    .+..+..+++..+||+||+|+.. +    .+++ .  .+.| +++++|+.++.....    ...
T Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Dvi~~~~~~~~~~~~~a~~~~~~~~~~-~V~~~h~~~~~~~~~----~~~  141 (415)
T cd03816          67 NKLPFLLFAPLKVLWQFFSLLWLLYKLRPADYILIQNPPSIPTLLIAWLYCLLRRTK-LIIDWHNYGYTILAL----KLG  141 (415)
T ss_pred             ccchHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCCCCchHHHHHHHHHHHhCCe-EEEEcCCchHHHHhc----ccC
Confidence            1110       1    11222223456789999998642 1    1222 1  2345 999999865321100    000


Q ss_pred             cCCCCccchHhHhHHHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchh--
Q 039338          222 RKPLEPMSLAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQS--  299 (493)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~--  299 (493)
                        ..    ..+ ..+...+     +..+++.+|.++++|+.+++.+.+ ++.+.+++.+|+||.+ ..|.+.+.....  
T Consensus       142 --~~----~~~-~~~~~~~-----e~~~~~~ad~ii~vS~~~~~~l~~-~~~~~~ki~vI~Ng~~-~~f~p~~~~~~~~~  207 (415)
T cd03816         142 --EN----HPL-VRLAKWY-----EKLFGRLADYNLCVTKAMKEDLQQ-FNNWKIRATVLYDRPP-EQFRPLPLEEKHEL  207 (415)
T ss_pred             --CC----CHH-HHHHHHH-----HHHHhhcCCEeeecCHHHHHHHHh-hhccCCCeeecCCCCH-HHceeCcHHHHHHH
Confidence              00    000 1122222     335678899999999999999988 7888899999999954 455543321111  


Q ss_pred             hhh-------------hhCCCCCCcEEEEEecccccccChHHHHHHHHHHHhh------CCCeEEEEEeCCCcHHHHhhh
Q 039338          300 FRS-------------RIGIPKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVK------YPDVYLIVAGSGPWEQRYKDF  360 (493)
Q Consensus       300 ~r~-------------~~~i~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~------~~~~~l~i~G~g~~~~~~~~l  360 (493)
                      +..             ..++..++..+++++||+.+.||++.+++|+..+++.      +|+++|+|+|+|+.++.++++
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~grl~~~K~~~~li~A~~~l~~~~~~~~~~~~i~l~ivG~G~~~~~l~~~  287 (415)
T cd03816         208 FLKLAKTFLTRELRIGAVQLSEERPALLVSSTSWTPDEDFGILLDALVAYEKSAATGPKLPKLLCIITGKGPLKEKYLER  287 (415)
T ss_pred             HHhccccccccccccccceecCCCceEEEEeccccCCCCHHHHHHHHHHHHHhhcccccCCCEEEEEEecCccHHHHHHH
Confidence            110             1223344557788999999999999999999999752      468999999999987766543


Q ss_pred             ----c-CcEEEe-cCCCHHHHHHHHHHcCEEEeCC--CCCCCCChHHHHHHHcCCcEEecCCCCCccceeeeCcceEEEC
Q 039338          361 ----G-HQVLVM-GSMSPAELRAFYNAIDIFVNPT--LRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFA  432 (493)
Q Consensus       361 ----~-~~V~~~-g~~~~~~~~~~~~~adv~v~ps--~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~  432 (493)
                          + +++.++ |+++.+++.++|++||+++.|+  ..++++|++++|||+||+|||+++.++.. |++.++.+|++++
T Consensus       288 ~~~~~l~~~~~~~g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~~~~-eiv~~~~~G~lv~  366 (415)
T cd03816         288 IKELKLKKVTIRTPWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFKCID-ELVKHGENGLVFG  366 (415)
T ss_pred             HHHcCCCcEEEEcCcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHcCCCEEEeCCCCHH-HHhcCCCCEEEEC
Confidence                2 456655 6899999999999999998743  23478999999999999999999999988 9999999999996


Q ss_pred             CCHHHHHHHHHHHHHc--CcHHHHHHHHHHHHHHHHhcCHHHHHHHH
Q 039338          433 PNVESLHKTLEAAVSE--GPMRLAQRGEACRQYAASMFTANKMALAY  477 (493)
Q Consensus       433 ~d~~~l~~~i~~ll~~--~~~~~~~~~~~~~~~~~~~fs~~~~~~~~  477 (493)
                       |+++++++|.++++|  +++.+++|++++++..+  ++|++..++.
T Consensus       367 -d~~~la~~i~~ll~~~~~~~~~~~m~~~~~~~~~--~~~~~~~~~~  410 (415)
T cd03816         367 -DSEELAEQLIDLLSNFPNRGKLNSLKKGAQEESE--LRWDENWDRV  410 (415)
T ss_pred             -CHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhhh--cCHHHHHHHH
Confidence             999999999999998  36889999999999885  4666654443

The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.

>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=2.7e-37  Score=302.80  Aligned_cols=356  Identities=21%  Similarity=0.216  Sum_probs=260.6

Q ss_pred             EEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCCCccccc
Q 039338           85 KIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEADKWRYS  164 (493)
Q Consensus        85 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (493)
                      ||++++..++++ ..||+++++.+++++|++.||+|++++.....  .........      ..................
T Consensus         1 ~ili~~~~~~~~-~~gG~~~~~~~l~~~L~~~~~~v~~~~~~~~~--~~~~~~~~~------~~~~~~~~~~~~~~~~~~   71 (365)
T cd03809           1 RILIDARFLASR-RPTGIGRYARELLRALLKLDPEEVLLLLPGAP--GLLLLPLRA------ALRLLLRLPRRLLWGLLF   71 (365)
T ss_pred             CEEEechhhhcC-CCCcHHHHHHHHHHHHHhcCCceEEEEecCcc--ccccccchh------ccccccccccccccchhh
Confidence            689999987543 68999999999999999999999999987765  211111000      000000000000111111


Q ss_pred             cchHHHHHHhcCCCCcEEEeCccchhHHhhhccCcEEEEeccchhhhhhhhhhhhhhcCCCCccchHhHhHHHHHHHHHH
Q 039338          165 KGWEQFDEENQREPFDVVHSESVALPHWLARNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQGVMLKVL  244 (493)
Q Consensus       165 ~~~~~~~~~~~~~~~DiI~~~~~~~~~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (493)
                      .............++|+||+++.........+.| ++.++|+..+........                .........  
T Consensus        72 ~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~-~i~~~hd~~~~~~~~~~~----------------~~~~~~~~~--  132 (365)
T cd03809          72 LLRAGDRLLLLLLGLDLLHSPHNTAPLLRLRGVP-VVVTIHDLIPLRFPEYFS----------------PGFRRYFRR--  132 (365)
T ss_pred             HHHHHHHHHhhhcCCCeeeecccccCcccCCCCC-EEEEeccchhhhCcccCC----------------HHHHHHHHH--
Confidence            1122223333457899999997654443344556 999999875433211100                001111111  


Q ss_pred             HHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCCCCCCcEEEEEeccccccc
Q 039338          245 NEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVAGRLVKDK  324 (493)
Q Consensus       245 ~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Gr~~~~K  324 (493)
                      .+...++++|.++++|+.+++.+.+.++.+..++.+++||+|...+.......   +.......+. .+|+++|++.+.|
T Consensus       133 ~~~~~~~~~d~~i~~s~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~i~~~G~~~~~K  208 (365)
T cd03809         133 LLRRALRRADAIITVSEATKRDLLRYLGVPPDKIVVIPLGVDPRFRPPPAEAE---VLRALYLLPR-PYFLYVGTIEPRK  208 (365)
T ss_pred             HHHHHHHHcCEEEEccHHHHHHHHHHhCcCHHHEEeeccccCccccCCCchHH---HHHHhcCCCC-CeEEEeCCCcccc
Confidence            12366789999999999999999998887788999999999988776543221   2333334444 7888999999999


Q ss_pred             ChHHHHHHHHHHHhhCCCeEEEEEeCCCcHH--HHh---h--hcCcEEEecCCCHHHHHHHHHHcCEEEeCCCCCCCCCh
Q 039338          325 GHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQ--RYK---D--FGHQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDL  397 (493)
Q Consensus       325 g~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~--~~~---~--l~~~V~~~g~~~~~~~~~~~~~adv~v~ps~~~eg~~~  397 (493)
                      |++.+++++..+.+.+++++++++|.+....  ..+   +  +.++|.++|+++++++.++|+.||++++||.. |++|+
T Consensus       209 ~~~~~l~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~d~~l~ps~~-e~~~~  287 (365)
T cd03809         209 NLERLLEAFARLPAKGPDPKLVIVGKRGWLNEELLARLRELGLGDRVRFLGYVSDEELAALYRGARAFVFPSLY-EGFGL  287 (365)
T ss_pred             CHHHHHHHHHHHHHhcCCCCEEEecCCccccHHHHHHHHHcCCCCeEEECCCCChhHHHHHHhhhhhhcccchh-ccCCC
Confidence            9999999999999988789999999754322  221   2  34899999999999999999999999999964 99999


Q ss_pred             HHHHHHHcCCcEEecCCCCCccceeeeCcceEEECC-CHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHhcCHHHHHHH
Q 039338          398 TLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAP-NVESLHKTLEAAVSEGPMRLAQRGEACRQYAASMFTANKMALA  476 (493)
Q Consensus       398 ~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~~-d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~  476 (493)
                      +++|||++|+|||+++.++.. |++  +..|+++++ |+++++++|.+++++ ++.+.++++++++.+++ |+|++++++
T Consensus       288 ~~~Ea~a~G~pvI~~~~~~~~-e~~--~~~~~~~~~~~~~~~~~~i~~l~~~-~~~~~~~~~~~~~~~~~-~sw~~~~~~  362 (365)
T cd03809         288 PVLEAMACGTPVIASNISSLP-EVA--GDAALYFDPLDPEALAAAIERLLED-PALREELRERGLARAKR-FSWEKTARR  362 (365)
T ss_pred             CHHHHhcCCCcEEecCCCCcc-cee--cCceeeeCCCCHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHh-CCHHHHHHH
Confidence            999999999999999999988 766  356888888 999999999999998 99999999999976655 999999998


Q ss_pred             HH
Q 039338          477 YE  478 (493)
Q Consensus       477 ~~  478 (493)
                      +.
T Consensus       363 ~~  364 (365)
T cd03809         363 TL  364 (365)
T ss_pred             Hh
Confidence            75

mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.

>PLN02846 digalactosyldiacylglycerol synthase

Probab=100.00  E-value=3.5e-36  Score=292.82  Aligned_cols=355  Identities=15%  Similarity=0.094  Sum_probs=240.0

Q ss_pred             CceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCC-CEEEEEecCCCCCCCCCCccc---------cCCCCCC-CCCCc
Q 039338           82 FTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRG-HRVHIFTSPVDNINSPSISHQ---------ENDDGSN-NKYPL  150 (493)
Q Consensus        82 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G-~~V~v~~~~~~~~~~~~~~~~---------~~~~~~~-~~~~~  150 (493)
                      .+|||+++|..|+|  ..+|+...+..++.+|+++| |+|+++.+......+ .....         +...... .....
T Consensus         3 ~~mrIaivTdt~lP--~vnGva~s~~~~a~~L~~~G~heV~vvaP~~~~~~~-~~~~~~~~~f~~~~~~e~~~~~~~~~~   79 (462)
T PLN02846          3 KKQHIAIFTTASLP--WMTGTAVNPLFRAAYLAKDGDREVTLVIPWLSLKDQ-KLVYPNKITFSSPSEQEAYVRQWLEER   79 (462)
T ss_pred             CCCEEEEEEcCCCC--CCCCeeccHHHHHHHHHhcCCcEEEEEecCCccccc-cccccccccccCchhhhhhhhhhccCe
Confidence            47999999999987  88999999999999999999 899999986543101 00000         0000000 00011


Q ss_pred             eEeecC-----CCCcc----ccccchHHHHHHhcCCCCcEEEeCccchhHHh--h----h-ccCcEEEEeccchhhhhhh
Q 039338          151 LHFHEG-----EADKW----RYSKGWEQFDEENQREPFDVVHSESVALPHWL--A----R-NVTNLAVSWHGIALESLQS  214 (493)
Q Consensus       151 ~~~~~~-----~~~~~----~~~~~~~~~~~~~~~~~~DiI~~~~~~~~~~~--~----~-~~p~~v~~~h~~~~~~~~~  214 (493)
                      +.....     .+..+    ........+.+.+++.+|||||++++....|.  +    + ..+ ++.++|.-...+...
T Consensus        80 v~r~~s~~~p~yp~r~~~~~r~~~~~~~i~~~l~~~~pDVIHv~tP~~LG~~~~g~~~~~k~~~-vV~tyHT~y~~Y~~~  158 (462)
T PLN02846         80 ISFLPKFSIKFYPGKFSTDKRSILPVGDISETIPDEEADIAVLEEPEHLTWYHHGKRWKTKFRL-VIGIVHTNYLEYVKR  158 (462)
T ss_pred             EEEecccccccCcccccccccccCChHHHHHHHHhcCCCEEEEcCchhhhhHHHHHHHHhcCCc-EEEEECCChHHHHHH
Confidence            111111     11111    11112356777788899999999998655553  1    1 234 677899733222110


Q ss_pred             hhhhhhhcCCCCccchHhHhHHHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCc
Q 039338          215 GIFQDLTRKPLEPMSLAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDL  294 (493)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~  294 (493)
                        +.      .    ......+.+.+.+++.  +  ..+|.++++|....+ +.+       .+.+..+|||.+.|.+..
T Consensus       159 --~~------~----g~~~~~l~~~~~~~~~--r--~~~d~vi~pS~~~~~-l~~-------~~i~~v~GVd~~~f~~~~  214 (462)
T PLN02846        159 --EK------N----GRVKAFLLKYINSWVV--D--IYCHKVIRLSAATQD-YPR-------SIICNVHGVNPKFLEIGK  214 (462)
T ss_pred             --hc------c----chHHHHHHHHHHHHHH--H--HhcCEEEccCHHHHH-Hhh-------CEEecCceechhhcCCCc
Confidence              00      0    0001122222333221  1  238999999986655 332       234445899999887654


Q ss_pred             ccchhhhhhhCCCCCC-cEEEEEecccccccChHHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhhhc-----CcEEEec
Q 039338          295 SLGQSFRSRIGIPKNA-SLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDFG-----HQVLVMG  368 (493)
Q Consensus       295 ~~~~~~r~~~~i~~~~-~~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~l~-----~~V~~~g  368 (493)
                      ..   .++.++ +++. ...++|+||+.++||++.++++++.+.+..++++|+|+|+|+.++.++++.     +...|.|
T Consensus       215 ~~---~~~~~~-~~~~~~~~~l~vGRL~~eK~~~~Li~a~~~l~~~~~~~~l~ivGdGp~~~~L~~~a~~l~l~~~vf~G  290 (462)
T PLN02846        215 LK---LEQQKN-GEQAFTKGAYYIGKMVWSKGYKELLKLLHKHQKELSGLEVDLYGSGEDSDEVKAAAEKLELDVRVYPG  290 (462)
T ss_pred             cc---HhhhcC-CCCCcceEEEEEecCcccCCHHHHHHHHHHHHhhCCCeEEEEECCCccHHHHHHHHHhcCCcEEEECC
Confidence            32   222222 2222 136789999999999999999999998877899999999999988877654     2234777


Q ss_pred             CCCHHHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCccceeeeCcceEEECCCHHHHHHHHHHHHHc
Q 039338          369 SMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAPNVESLHKTLEAAVSE  448 (493)
Q Consensus       369 ~~~~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~~d~~~l~~~i~~ll~~  448 (493)
                      ..+.   .++|+.+|++|+||.. |++|++++||||||+|||+++.++ . +++.++.+|+.++ |.+++++++.+++.+
T Consensus       291 ~~~~---~~~~~~~DvFv~pS~~-Et~g~v~lEAmA~G~PVVa~~~~~-~-~~v~~~~ng~~~~-~~~~~a~ai~~~l~~  363 (462)
T PLN02846        291 RDHA---DPLFHDYKVFLNPSTT-DVVCTTTAEALAMGKIVVCANHPS-N-EFFKQFPNCRTYD-DGKGFVRATLKALAE  363 (462)
T ss_pred             CCCH---HHHHHhCCEEEECCCc-ccchHHHHHHHHcCCcEEEecCCC-c-ceeecCCceEecC-CHHHHHHHHHHHHcc
Confidence            6543   3799999999999965 999999999999999999999987 4 8899999999996 899999999999987


Q ss_pred             CcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 039338          449 GPMRLAQRGEACRQYAASMFTANKMALAYERLFL  482 (493)
Q Consensus       449 ~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~  482 (493)
                      .++   .++.+++    +.|||+..++++.++|+
T Consensus       364 ~~~---~~~~~a~----~~~SWe~~~~~l~~~~~  390 (462)
T PLN02846        364 EPA---PLTDAQR----HELSWEAATERFLRVAD  390 (462)
T ss_pred             Cch---hHHHHHH----HhCCHHHHHHHHHHHhc
Confidence            332   2223332    36999999999999996

>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=3.4e-37  Score=301.65  Aligned_cols=336  Identities=21%  Similarity=0.268  Sum_probs=245.4

Q ss_pred             EEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCCCccccc
Q 039338           85 KIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEADKWRYS  164 (493)
Q Consensus        85 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (493)
                      ||+++++.+    ..||.++++.+++++|.+.||+|++++.....  .......     ...+...+. .  ........
T Consensus         1 kIl~~~~~~----~~GG~~~~~~~l~~~L~~~~~~v~~i~~~~~~--~~~~~~~-----~~~~~~~~~-~--~~~~~~~~   66 (358)
T cd03812           1 KILHIVGTM----NRGGIETFIMNYYRNLDRSKIQFDFLVTSKEE--GDYDDEI-----EKLGGKIYY-I--PARKKNPL   66 (358)
T ss_pred             CEEEEeCCC----CCccHHHHHHHHHHhcCccceEEEEEEeCCCC--cchHHHH-----HHcCCeEEE-e--cCCCccHH
Confidence            699999876    67999999999999999999999999976544  1111110     011111111 1  11222223


Q ss_pred             cchHHHHHHhcCCCCcEEEeCccch---hHHhhh--ccCcEEEEeccchhhhhhhhhhhhhhcCCCCccchHhHhHHHHH
Q 039338          165 KGWEQFDEENQREPFDVVHSESVAL---PHWLAR--NVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQGV  239 (493)
Q Consensus       165 ~~~~~~~~~~~~~~~DiI~~~~~~~---~~~~~~--~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (493)
                      .....+.+.+++.+||+||+|+...   ..++.+  ..|.++.+.|+........              .    ..... 
T Consensus        67 ~~~~~~~~~~~~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~--------------~----~~~~~-  127 (358)
T cd03812          67 KYFKKLYKLIKKNKYDIVHVHGSSASGFILLAAKKAGVKVRIAHSHNTSDSHDKK--------------K----KILKY-  127 (358)
T ss_pred             HHHHHHHHHHhcCCCCEEEEeCcchhHHHHHHHhhCCCCeEEEEecccccccccc--------------c----hhhHH-
Confidence            3345556666788999999997632   222222  3354566777643221000              0    00000 


Q ss_pred             HHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCCCCCCcEEEEEecc
Q 039338          240 MLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVAGR  319 (493)
Q Consensus       240 ~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Gr  319 (493)
                         ...+..+++.++.++++|+...+.+.+.  ....++.+||||+|.+.+.+....... +++.+...++ ++|+|+||
T Consensus       128 ---~~~~~~~~~~~~~~i~~s~~~~~~~~~~--~~~~~~~vi~ngvd~~~~~~~~~~~~~-~~~~~~~~~~-~~i~~vGr  200 (358)
T cd03812         128 ---KVLRKLINRLATDYLACSEEAGKWLFGK--VKNKKFKVIPNGIDLEKFIFNEEIRKK-RRELGILEDK-FVIGHVGR  200 (358)
T ss_pred             ---HHHHHHHHhcCCEEEEcCHHHHHHHHhC--CCcccEEEEeccCcHHHcCCCchhhhH-HHHcCCCCCC-EEEEEEec
Confidence               1112345678999999999999998775  467899999999999877655433332 4555665555 88999999


Q ss_pred             cccccChHHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhhh------cCcEEEecCCCHHHHHHHHHHcCEEEeCCCCCC
Q 039338          320 LVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDF------GHQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQ  393 (493)
Q Consensus       320 ~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~l------~~~V~~~g~~~~~~~~~~~~~adv~v~ps~~~e  393 (493)
                      +.+.||++.+++++..+.+++++++++++|+|+..+.+++.      .++|.++|+  .+++.++|+.||++|+||. .|
T Consensus       201 ~~~~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~adi~v~ps~-~E  277 (358)
T cd03812         201 FSEQKNHEFLIEIFAELLKKNPNAKLLLVGDGELEEEIKKKVKELGLEDKVIFLGV--RNDVPELLQAMDVFLFPSL-YE  277 (358)
T ss_pred             cccccChHHHHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhcCCCCcEEEecc--cCCHHHHHHhcCEEEeccc-cc
Confidence            99999999999999999998899999999999876655443      278999999  4789999999999999996 49


Q ss_pred             CCChHHHHHHHcCCcEEecCCCCCccceeeeCcceEEECC-CHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHH
Q 039338          394 GLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAP-NVESLHKTLEAAVSEGPMRLAQRGEACRQYAAS  466 (493)
Q Consensus       394 g~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~~-d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~  466 (493)
                      |+|++++|||++|+|||+++.++.. +++.+ ..|++..+ ++++++++|.+++++ ++.++.++..+......
T Consensus       278 ~~~~~~lEAma~G~PvI~s~~~~~~-~~i~~-~~~~~~~~~~~~~~a~~i~~l~~~-~~~~~~~~~~~~~~~~~  348 (358)
T cd03812         278 GLPLVLIEAQASGLPCILSDTITKE-VDLTD-LVKFLSLDESPEIWAEEILKLKSE-DRRERSSESIKKKGLDA  348 (358)
T ss_pred             CCCHHHHHHHHhCCCEEEEcCCchh-hhhcc-CccEEeCCCCHHHHHHHHHHHHhC-cchhhhhhhhhhccchh
Confidence            9999999999999999999999998 77777 45666666 789999999999999 88888888777766554

capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).

>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=3.6e-36  Score=294.95  Aligned_cols=339  Identities=22%  Similarity=0.278  Sum_probs=250.2

Q ss_pred             EEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCCCccccc
Q 039338           85 KIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEADKWRYS  164 (493)
Q Consensus        85 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (493)
                      ||+||+..+|   ..||+++++.+|+++|.+.||+|++++.....  ......       ... ......     .....
T Consensus         1 kI~~v~~~~~---~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~--~~~~~~-------~~~-~~~~~~-----~~~~~   62 (366)
T cd03822           1 RIALVSPYPP---RKCGIATFTTDLVNALSARGPDVLVVSVAALY--PSLLYG-------GEQ-EVVRVI-----VLDNP   62 (366)
T ss_pred             CeEEecCCCC---CCCcHHHHHHHHHHHhhhcCCeEEEEEeeccc--CcccCC-------Ccc-cceeee-----ecCCc
Confidence            6999987543   57999999999999999999999999876544  111111       000 001111     11122


Q ss_pred             cchHHHHHHhcCCCCcEEEeCcc------chhHHhh-----hccCcEEEEeccchhhhhhhhhhhhhhcCCCCccchHhH
Q 039338          165 KGWEQFDEENQREPFDVVHSESV------ALPHWLA-----RNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFN  233 (493)
Q Consensus       165 ~~~~~~~~~~~~~~~DiI~~~~~------~~~~~~~-----~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (493)
                      ..+..+.+.++..+||+||++..      .....+.     .+.| ++.++|+.....               .      
T Consensus        63 ~~~~~~~~~~~~~~~dii~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~h~~~~~~---------------~------  120 (366)
T cd03822          63 LDYRRAARAIRLSGPDVVVIQHEYGIFGGEAGLYLLLLLRGLGIP-VVVTLHTVLLHE---------------P------  120 (366)
T ss_pred             hhHHHHHHHHhhcCCCEEEEeeccccccchhhHHHHHHHhhcCCC-EEEEEecCCccc---------------c------
Confidence            23345566667889999998752      1111111     3446 999999861100               0      


Q ss_pred             hHHHHHHHHHHHHHHhhccCCeEEEcC-hhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCCCCCCcE
Q 039338          234 KSLQGVMLKVLNEIRFFNKYAHHVAIS-DSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASL  312 (493)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~d~ii~~S-~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~  312 (493)
                      ......+     ....++.+|.++++| +...+.+.. .  ..+++.+++||++...+......     ++...+.++ +
T Consensus       121 ~~~~~~~-----~~~~~~~~d~ii~~s~~~~~~~~~~-~--~~~~~~~i~~~~~~~~~~~~~~~-----~~~~~~~~~-~  186 (366)
T cd03822         121 RPGDRAL-----LRLLLRRADAVIVMSSELLRALLLR-A--YPEKIAVIPHGVPDPPAEPPESL-----KALGGLDGR-P  186 (366)
T ss_pred             chhhhHH-----HHHHHhcCCEEEEeeHHHHHHHHhh-c--CCCcEEEeCCCCcCcccCCchhh-----HhhcCCCCC-e
Confidence            0111111     125578899999996 444444333 1  14799999999998766543211     222333343 7


Q ss_pred             EEEEecccccccChHHHHHHHHHHHhhCCCeEEEEEeCCCcHHH---------Hhhhc--CcEEEecC-CCHHHHHHHHH
Q 039338          313 VLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQR---------YKDFG--HQVLVMGS-MSPAELRAFYN  380 (493)
Q Consensus       313 ~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~---------~~~l~--~~V~~~g~-~~~~~~~~~~~  380 (493)
                      +++++|++.+.||++.+++++..+.+++++++|+++|++.....         +++++  ++|.|+|. ++.+++.++|+
T Consensus       187 ~i~~~G~~~~~K~~~~ll~a~~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~~~~~~~~~~~~  266 (366)
T cd03822         187 VLLTFGLLRPYKGLELLLEALPLLVAKHPDVRLLVAGETHPDLERYRGEAYALAERLGLADRVIFINRYLPDEELPELFS  266 (366)
T ss_pred             EEEEEeeccCCCCHHHHHHHHHHHHhhCCCeEEEEeccCccchhhhhhhhHhHHHhcCCCCcEEEecCcCCHHHHHHHHh
Confidence            88999999999999999999999999889999999998653221         33433  79999987 99999999999


Q ss_pred             HcCEEEeCCCCCC--CCChHHHHHHHcCCcEEecCCCCCccceeeeCcceEEECC-CHHHHHHHHHHHHHcCcHHHHHHH
Q 039338          381 AIDIFVNPTLRPQ--GLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAP-NVESLHKTLEAAVSEGPMRLAQRG  457 (493)
Q Consensus       381 ~adv~v~ps~~~e--g~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~~-d~~~l~~~i~~ll~~~~~~~~~~~  457 (493)
                      .||++++||. .|  ++|.+++|||++|+|||+++.++ . +.+.++.+|+++++ |+++++++|.+++++ ++.+.+++
T Consensus       267 ~ad~~v~ps~-~e~~~~~~~~~Ea~a~G~PvI~~~~~~-~-~~i~~~~~g~~~~~~d~~~~~~~l~~l~~~-~~~~~~~~  342 (366)
T cd03822         267 AADVVVLPYR-SADQTQSGVLAYAIGFGKPVISTPVGH-A-EEVLDGGTGLLVPPGDPAALAEAIRRLLAD-PELAQALR  342 (366)
T ss_pred             hcCEEEeccc-ccccccchHHHHHHHcCCCEEecCCCC-h-heeeeCCCcEEEcCCCHHHHHHHHHHHHcC-hHHHHHHH
Confidence            9999999996 48  99999999999999999999998 5 66788889999998 999999999999998 88999999


Q ss_pred             HHHHHHHHHhcCHHHHHHHHHHHHH
Q 039338          458 EACRQYAASMFTANKMALAYERLFL  482 (493)
Q Consensus       458 ~~~~~~~~~~fs~~~~~~~~~~~~~  482 (493)
                      +++++.+++ |||+.+++++.++|+
T Consensus       343 ~~~~~~~~~-~s~~~~~~~~~~~~~  366 (366)
T cd03822         343 ARAREYARA-MSWERVAERYLRLLA  366 (366)
T ss_pred             HHHHHHHhh-CCHHHHHHHHHHHhC
Confidence            999999988 999999999999873

ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.

>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism]

Probab=100.00  E-value=1.3e-37  Score=278.19  Aligned_cols=354  Identities=22%  Similarity=0.278  Sum_probs=266.6

Q ss_pred             eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCC-----
Q 039338           84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEA-----  158 (493)
Q Consensus        84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  158 (493)
                      ++|++|++.|  .+..||++.++..|++.|-+.||.|.+++-...+  ......      ...+ -.+++.+...     
T Consensus         1 ~~i~mVsdff--~P~~ggveshiy~lSq~li~lghkVvvithayg~--r~giry------lt~g-lkVyylp~~v~~n~t   69 (426)
T KOG1111|consen    1 SRILMVSDFF--YPSTGGVESHIYALSQCLIRLGHKVVVITHAYGN--RVGIRY------LTNG-LKVYYLPAVVGYNQT   69 (426)
T ss_pred             CcceeeCccc--ccCCCChhhhHHHhhcchhhcCCeEEEEeccccC--ccceee------ecCC-ceEEEEeeeeeeccc
Confidence            4699999977  3489999999999999999999999999987766  222222      1111 2333332211     


Q ss_pred             CccccccchHHHHHHhcCCCCcEEEeCcc-------chhHHhhhccCcEEEEeccchhhhhhhhhhhhhhcCCCCccchH
Q 039338          159 DKWRYSKGWEQFDEENQREPFDVVHSESV-------ALPHWLARNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLA  231 (493)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~DiI~~~~~-------~~~~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (493)
                      ........+..++.+..++++.|||.|+.       ++......+.. .+.|=|........+.+.              
T Consensus        70 T~ptv~~~~Pllr~i~lrE~I~ivhghs~fS~lahe~l~hartMGlk-tVfTdHSlfGfad~~si~--------------  134 (426)
T KOG1111|consen   70 TFPTVFSDFPLLRPILLRERIEIVHGHSPFSYLAHEALMHARTMGLK-TVFTDHSLFGFADIGSIL--------------  134 (426)
T ss_pred             chhhhhccCcccchhhhhhceEEEecCChHHHHHHHHHHHHHhcCce-EEEeccccccccchhhhh--------------
Confidence            11223334556666666779999999976       23333344545 889988754322111111              


Q ss_pred             hHhHHHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCCCCCCc
Q 039338          232 FNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNAS  311 (493)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~  311 (493)
                           ..   +.+  .-.+...|++||+|...++...=+-.+++.++.+|||.++...|.|++..+         +.++.
T Consensus       135 -----~n---~ll--~~sL~~id~~IcVshtskentvlr~~L~p~kvsvIPnAv~~~~f~P~~~~~---------~S~~i  195 (426)
T KOG1111|consen  135 -----TN---KLL--PLSLANIDRIICVSHTSKENTVLRGALAPAKVSVIPNAVVTHTFTPDAADK---------PSADI  195 (426)
T ss_pred             -----hc---cee--eeeecCCCcEEEEeecCCCceEEEeccCHhHeeeccceeeccccccCcccc---------CCCCe
Confidence                 11   111  123567899999999988765444467889999999999999999865532         34444


Q ss_pred             EEEEEecccccccChHHHHHHHHHHHhhCCCeEEEEEeCCC----cHHHHhh--hcCcEEEecCCCHHHHHHHHHHcCEE
Q 039338          312 LVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGP----WEQRYKD--FGHQVLVMGSMSPAELRAFYNAIDIF  385 (493)
Q Consensus       312 ~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~----~~~~~~~--l~~~V~~~g~~~~~~~~~~~~~adv~  385 (493)
                      +.++.++|+...||+|.+++++.++.+++|+++++|+|+||    .++.+++  +.++|.++|.++++++.+.|.+-|+|
T Consensus       196 ~~ivv~sRLvyrKGiDll~~iIp~vc~~~p~vrfii~GDGPk~i~lee~lEk~~l~~rV~~lG~v~h~~Vr~vl~~G~IF  275 (426)
T KOG1111|consen  196 ITIVVASRLVYRKGIDLLLEIIPSVCDKHPEVRFIIIGDGPKRIDLEEMLEKLFLQDRVVMLGTVPHDRVRDVLVRGDIF  275 (426)
T ss_pred             eEEEEEeeeeeccchHHHHHHHHHHHhcCCCeeEEEecCCcccchHHHHHHHhhccCceEEecccchHHHHHHHhcCcEE
Confidence            88999999999999999999999999999999999999999    4444444  34999999999999999999999999


Q ss_pred             EeCCCCCCCCChHHHHHHHcCCcEEecCCCCCccceeeeCcceEEECCCHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHH
Q 039338          386 VNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAPNVESLHKTLEAAVSEGPMRLAQRGEACRQYAA  465 (493)
Q Consensus       386 v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~  465 (493)
                      ++||.. |.|+++++||++||+|||+++.||++ |++-++ .-++-+++++++++++++.+...+.    .-+...++++
T Consensus       276 lntSlT-Eafc~~ivEAaScGL~VVsTrVGGIp-eVLP~d-~i~~~~~~~~dl~~~v~~ai~~~~~----~p~~~h~~v~  348 (426)
T KOG1111|consen  276 LNTSLT-EAFCMVIVEAASCGLPVVSTRVGGIP-EVLPED-MITLGEPGPDDLVGAVEKAITKLRT----LPLEFHDRVK  348 (426)
T ss_pred             eccHHH-HHHHHHHHHHHhCCCEEEEeecCCcc-ccCCcc-ceeccCCChHHHHHHHHHHHHHhcc----CchhHHHHHH
Confidence            999975 99999999999999999999999999 776555 3333344899999999999876222    2355677888


Q ss_pred             HhcCHHHHHHHHHHHHHHHhhccc
Q 039338          466 SMFTANKMALAYERLFLCIKNETF  489 (493)
Q Consensus       466 ~~fs~~~~~~~~~~~~~~i~~~~~  489 (493)
                      +.|+|+..+++-+.+|.++.+.+.
T Consensus       349 ~~y~w~dVa~rTekvy~r~~~t~~  372 (426)
T KOG1111|consen  349 KMYSWKDVAERTEKVYDRAATTSI  372 (426)
T ss_pred             HhccHHHHHHHHHHHHHHHhhccC
Confidence            889999999999999999887653

>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=8.8e-36  Score=292.31  Aligned_cols=361  Identities=27%  Similarity=0.404  Sum_probs=270.4

Q ss_pred             EEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCC-CCCCCCCceEeecCCCCccccc
Q 039338           86 IAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDD-GSNNKYPLLHFHEGEADKWRYS  164 (493)
Q Consensus        86 Il~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  164 (493)
                      |+++++.||+. ..||++.++..++++|.+.||+|++++.....  ........... ......................
T Consensus         1 iLii~~~~p~~-~~~g~~~~~~~~~~~l~~~g~~v~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (377)
T cd03798           1 ILVISSLYPPP-NNGGGGIFVKELARALAKRGVEVTVLAPGPWG--PKLLDLLKGRLVGVERLPVLLPVVPLLKGPLLYL   77 (377)
T ss_pred             CeEeccCCCCC-CCchHHHHHHHHHHHHHHCCCceEEEecCCCC--CCchhhcccccccccccccCcchhhccccchhHH
Confidence            68899988752 47999999999999999999999999987665  21111100000 0000000000011111222333


Q ss_pred             cchHHHHHHhc--CCCCcEEEeCccchhHH----hhh--ccCcEEEEeccchhhhhhhhhhhhhhcCCCCccchHhHhHH
Q 039338          165 KGWEQFDEENQ--REPFDVVHSESVALPHW----LAR--NVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSL  236 (493)
Q Consensus       165 ~~~~~~~~~~~--~~~~DiI~~~~~~~~~~----~~~--~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (493)
                      .....+.+.++  ..++|+||++......+    +.+  ++| ++.+.|+.........                   ..
T Consensus        78 ~~~~~~~~~l~~~~~~~dii~~~~~~~~~~~~~~~~~~~~~~-~i~~~h~~~~~~~~~~-------------------~~  137 (377)
T cd03798          78 LAARALLKLLKLKRFRPDLIHAHFAYPDGFAAALLKRKLGIP-LVVTLHGSDVNLLPRK-------------------RL  137 (377)
T ss_pred             HHHHHHHHHHhcccCCCCEEEEeccchHHHHHHHHHHhcCCC-EEEEeecchhcccCch-------------------hh
Confidence            44556666776  88999999986532222    222  236 8999998654321110                   01


Q ss_pred             HHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCCCCCCcEEEEE
Q 039338          237 QGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGV  316 (493)
Q Consensus       237 ~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~  316 (493)
                      ...     .+...++++|.++++|+..++.+.+.+ .+..++.+++||+|...+.+......   .+.+...+ ++.+++
T Consensus       138 ~~~-----~~~~~~~~~d~ii~~s~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~i~~  207 (377)
T cd03798         138 LRA-----LLRRALRRADAVIAVSEALADELKALG-IDPEKVTVIPNGVDTERFSPADRAEA---RKLGLPED-KKVILF  207 (377)
T ss_pred             HHH-----HHHHHHhcCCeEEeCCHHHHHHHHHhc-CCCCceEEcCCCcCcccCCCcchHHH---HhccCCCC-ceEEEE
Confidence            111     123567899999999999999998854 67789999999999987765433211   22333333 488999


Q ss_pred             ecccccccChHHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhhh------cCcEEEecCCCHHHHHHHHHHcCEEEeCCC
Q 039338          317 AGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDF------GHQVLVMGSMSPAELRAFYNAIDIFVNPTL  390 (493)
Q Consensus       317 ~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~l------~~~V~~~g~~~~~~~~~~~~~adv~v~ps~  390 (493)
                      +|++.+.||++.+++++..+.+++++++++++|.++..+.++++      .++|.+.|+++++++.++|++||++++|+.
T Consensus       208 ~g~~~~~k~~~~li~~~~~~~~~~~~~~l~i~g~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~i~~~~  287 (377)
T cd03798         208 VGRLVPRKGIDYLIEALARLLKKRPDVHLVIVGDGPLREALEALAAELGLEDRVTFLGAVPHEEVPAYYAAADVFVLPSL  287 (377)
T ss_pred             eccCccccCHHHHHHHHHHHHhcCCCeEEEEEcCCcchHHHHHHHHhcCCcceEEEeCCCCHHHHHHHHHhcCeeecchh
Confidence            99999999999999999999888889999999998776655443      378999999999999999999999999996


Q ss_pred             CCCCCChHHHHHHHcCCcEEecCCCCCccceeeeCcceEEECC-CHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHhcC
Q 039338          391 RPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAP-NVESLHKTLEAAVSEGPMRLAQRGEACRQYAASMFT  469 (493)
Q Consensus       391 ~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~~-d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs  469 (493)
                      . |++|++++|||++|+|||+++.++.. +++.++.+|+++++ |+++++++|.+++++ ++.  +++.++++.+.+.|+
T Consensus       288 ~-~~~~~~~~Ea~~~G~pvI~~~~~~~~-~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~-~~~--~~~~~~~~~~~~~~s  362 (377)
T cd03798         288 R-EGFGLVLLEAMACGLPVVATDVGGIP-EIITDGENGLLVPPGDPEALAEAILRLLAD-PWL--RLGRAARRRVAERFS  362 (377)
T ss_pred             h-ccCChHHHHHHhcCCCEEEecCCChH-HHhcCCcceeEECCCCHHHHHHHHHHHhcC-cHH--HHhHHHHHHHHHHhh
Confidence            5 99999999999999999999999988 88899999999999 999999999999998 655  788899999999999


Q ss_pred             HHHHHHHHHHHHHHH
Q 039338          470 ANKMALAYERLFLCI  484 (493)
Q Consensus       470 ~~~~~~~~~~~~~~i  484 (493)
                      |+.+++++.++|+++
T Consensus       363 ~~~~~~~~~~~~~~l  377 (377)
T cd03798         363 WENVAERLLELYREV  377 (377)
T ss_pred             HHHHHHHHHHHHhhC
Confidence            999999999999764

wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.

>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=6.8e-36  Score=295.10  Aligned_cols=365  Identities=23%  Similarity=0.257  Sum_probs=261.2

Q ss_pred             EEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCC-Ccc--
Q 039338           85 KIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEA-DKW--  161 (493)
Q Consensus        85 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--  161 (493)
                      ||++++..+|+  ..||.+.++..++++|+++||+|++++.....  ........ ..........+....... ...  
T Consensus         1 kIl~i~~~~~~--~~~G~~~~~~~l~~~L~~~g~~v~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~   75 (394)
T cd03794           1 KILILSQYFPP--ELGGGAFRTTELAEELVKRGHEVTVITGSPNY--PSGKIYKG-YKREEVDGVRVHRVPLPPYKKNGL   75 (394)
T ss_pred             CEEEEecccCC--ccCCcceeHHHHHHHHHhCCceEEEEecCCCc--cccccccc-ceEEecCCeEEEEEecCCCCccch
Confidence            69999998876  44999999999999999999999999987654  11111000 000000111111111111 100  


Q ss_pred             -----ccccc-hHHHHHHh-cCCCCcEEEeCccc----hhHH-hhh--ccCcEEEEeccchhhhhhhhhhhhhhcCCCCc
Q 039338          162 -----RYSKG-WEQFDEEN-QREPFDVVHSESVA----LPHW-LAR--NVTNLAVSWHGIALESLQSGIFQDLTRKPLEP  227 (493)
Q Consensus       162 -----~~~~~-~~~~~~~~-~~~~~DiI~~~~~~----~~~~-~~~--~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~  227 (493)
                           ..... +....... +..+||+||+++..    .... ..+  +.| +++++|+.+..........     ..  
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~~~~~~~~~~~~-~i~~~h~~~~~~~~~~~~~-----~~--  147 (394)
T cd03794          76 LKRLLNYLSFALSALLALLKRRRRPDVIIATSPPLLIALAALLLARLKGAP-FVLEVRDLWPESAVALGLL-----KN--  147 (394)
T ss_pred             HHHHHhhhHHHHHHHHHHHhcccCCCEEEEcCChHHHHHHHHHHHHhcCCC-EEEEehhhcchhHHHccCc-----cc--
Confidence                 01111 11112222 47799999999732    1111 122  346 8999998654332111000     00  


Q ss_pred             cchHhHhHHHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCCC
Q 039338          228 MSLAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIP  307 (493)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~  307 (493)
                        .   ........+  .+...++.+|.++++|+...+.+. .++.+..++.++|||+|...+.+......  +......
T Consensus       148 --~---~~~~~~~~~--~~~~~~~~~d~vi~~s~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~--~~~~~~~  217 (394)
T cd03794         148 --G---SLLYRLLRK--LERLIYRRADAIVVISPGMREYLV-RRGVPPEKISVIPNGVDLELFKPPPADES--LRKELGL  217 (394)
T ss_pred             --c---chHHHHHHH--HHHHHHhcCCEEEEECHHHHHHHH-hcCCCcCceEEcCCCCCHHHcCCccchhh--hhhccCC
Confidence              0   000011111  133667899999999999999998 46778889999999999877655432211  2333333


Q ss_pred             CCCcEEEEEecccccccChHHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhhh-----cCcEEEecCCCHHHHHHHHHHc
Q 039338          308 KNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDF-----GHQVLVMGSMSPAELRAFYNAI  382 (493)
Q Consensus       308 ~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~l-----~~~V~~~g~~~~~~~~~~~~~a  382 (493)
                      .+ +++|+++|++.+.||++.+++++..+.+. ++++++++|+|+..+.++++     .++|.++|+++++++.++|+.|
T Consensus       218 ~~-~~~i~~~G~~~~~k~~~~l~~~~~~l~~~-~~~~l~i~G~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~  295 (394)
T cd03794         218 DD-KFVVLYAGNIGRAQGLDTLLEAAALLKDR-PDIRFLIVGDGPEKEELKELAKALGLDNVTFLGRVPKEELPELLAAA  295 (394)
T ss_pred             CC-cEEEEEecCcccccCHHHHHHHHHHHhhc-CCeEEEEeCCcccHHHHHHHHHHcCCCcEEEeCCCChHHHHHHHHhh
Confidence            33 48899999999999999999999999877 79999999998877666552     2789999999999999999999


Q ss_pred             CEEEeCCCCCCC-----CChHHHHHHHcCCcEEecCCCCCccceeeeCcceEEECC-CHHHHHHHHHHHHHcCcHHHHHH
Q 039338          383 DIFVNPTLRPQG-----LDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAP-NVESLHKTLEAAVSEGPMRLAQR  456 (493)
Q Consensus       383 dv~v~ps~~~eg-----~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~~-d~~~l~~~i~~ll~~~~~~~~~~  456 (493)
                      |++++|+.. |+     +|++++|||++|+|||+++.++.. +++.++++|+++++ |+++++++|.+++.+ ++.++++
T Consensus       296 di~i~~~~~-~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~-~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~-~~~~~~~  372 (394)
T cd03794         296 DVGLVPLKP-GPAFEGVSPSKLFEYMAAGKPVLASVDGESA-ELVEEAGAGLVVPPGDPEALAAAILELLDD-PEERAEM  372 (394)
T ss_pred             CeeEEeccC-cccccccCchHHHHHHHCCCcEEEecCCCch-hhhccCCcceEeCCCCHHHHHHHHHHHHhC-hHHHHHH
Confidence            999999964 54     488999999999999999999988 88888889999999 999999999999988 8999999


Q ss_pred             HHHHHHHHHHhcCHHHHHHHH
Q 039338          457 GEACRQYAASMFTANKMALAY  477 (493)
Q Consensus       457 ~~~~~~~~~~~fs~~~~~~~~  477 (493)
                      ++++++++.++|+|+.++++|
T Consensus       373 ~~~~~~~~~~~~s~~~~~~~~  393 (394)
T cd03794         373 GENGRRYVEEKFSREKLAERL  393 (394)
T ss_pred             HHHHHHHHHHhhcHHHHHHhc
Confidence            999999999889999999886

wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.

>PLN02949 transferase, transferring glycosyl groups

Probab=100.00  E-value=2.4e-35  Score=291.89  Aligned_cols=384  Identities=16%  Similarity=0.095  Sum_probs=251.0

Q ss_pred             CceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCC--EEEEEecCCCCCCCCCCc----cccCCCC-CCCCCCceEee
Q 039338           82 FTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGH--RVHIFTSPVDNINSPSIS----HQENDDG-SNNKYPLLHFH  154 (493)
Q Consensus        82 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~--~V~v~~~~~~~~~~~~~~----~~~~~~~-~~~~~~~~~~~  154 (493)
                      ++++|++++++.   ...||+|+.+...+.+|.+.|+  +|+++|...+.  .. .+    ..+.... ......-++..
T Consensus        32 ~~~~v~f~HP~~---~~ggG~ERvl~~a~~~l~~~~~~~~v~iyt~~~d~--~~-~~~l~~~~~~~~i~~~~~~~~v~l~  105 (463)
T PLN02949         32 RKRAVGFFHPYT---NDGGGGERVLWCAVRAIQEENPDLDCVIYTGDHDA--SP-DSLAARARDRFGVELLSPPKVVHLR  105 (463)
T ss_pred             CCcEEEEECCCC---CCCCChhhHHHHHHHHHHhhCCCCeEEEEcCCCCC--CH-HHHHHHHHhhcceecCCCceEEEec
Confidence            357899999864   3555999999999999999998  77777755333  11 11    0000000 00011111110


Q ss_pred             cC---CCCccccccc-------hHHHHHHhcCCCCcEEEeCccc----hhHHhhhccCcEEEEeccchhhh-hhhhhhhh
Q 039338          155 EG---EADKWRYSKG-------WEQFDEENQREPFDVVHSESVA----LPHWLARNVTNLAVSWHGIALES-LQSGIFQD  219 (493)
Q Consensus       155 ~~---~~~~~~~~~~-------~~~~~~~~~~~~~DiI~~~~~~----~~~~~~~~~p~~v~~~h~~~~~~-~~~~~~~~  219 (493)
                      ..   .+..+.....       .....+.+.+..|| |++.+.+    ++.+...+.| ++..+|.+.... +.......
T Consensus       106 ~~~~~~~~~~~~~t~~~~~~~~~~l~~~~~~~~~p~-v~vDt~~~~~~~pl~~~~~~~-v~~yvH~p~~~~dm~~~v~~~  183 (463)
T PLN02949        106 KRKWIEEETYPRFTMIGQSLGSVYLAWEALCKFTPL-YFFDTSGYAFTYPLARLFGCK-VVCYTHYPTISSDMISRVRDR  183 (463)
T ss_pred             cccccccccCCceehHHHHHHHHHHHHHHHHhcCCC-EEEeCCCcccHHHHHHhcCCc-EEEEEeCCcchHHHHHHHhhc
Confidence            11   1111211111       11112222234555 5554432    2332222456 999999764332 11111100


Q ss_pred             hhcCCCC--ccch---HhHhHHHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCc
Q 039338          220 LTRKPLE--PMSL---AFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDL  294 (493)
Q Consensus       220 ~~~~~~~--~~~~---~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~  294 (493)
                      -....+.  ....   ...+.++......+ +....+.+|.++++|++.++.+.+.++. .+++.+++||+|.+.+...+
T Consensus       184 ~~~~~~~~~~a~~~~~~~~k~~Y~~~~~~l-~~~~~~~ad~ii~nS~~t~~~l~~~~~~-~~~i~vvyp~vd~~~~~~~~  261 (463)
T PLN02949        184 SSMYNNDASIARSFWLSTCKILYYRAFAWM-YGLVGRCAHLAMVNSSWTKSHIEALWRI-PERIKRVYPPCDTSGLQALP  261 (463)
T ss_pred             ccccCccchhhccchhHHHHHHHHHHHHHH-HHHHcCCCCEEEECCHHHHHHHHHHcCC-CCCeEEEcCCCCHHHcccCC
Confidence            0000000  0000   11112222222211 2234578999999999999999887664 35789999999876553211


Q ss_pred             ccchhhhhhhCCCCCCcEEEEEecccccccChHHHHHHHHHHHhh----CCCeEEEEEeCCCc---H---HHHhh----h
Q 039338          295 SLGQSFRSRIGIPKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVK----YPDVYLIVAGSGPW---E---QRYKD----F  360 (493)
Q Consensus       295 ~~~~~~r~~~~i~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~----~~~~~l~i~G~g~~---~---~~~~~----l  360 (493)
                      ..         -+.++ ..++++||+.+.||++.+++|++++.++    .++++|+|+|+++.   .   +.+++    +
T Consensus       262 ~~---------~~~~~-~~il~vGR~~~~Kg~~llI~A~~~l~~~~~~~~~~~~LvIvG~~~~~~~~~~~~eL~~la~~l  331 (463)
T PLN02949        262 LE---------RSEDP-PYIISVAQFRPEKAHALQLEAFALALEKLDADVPRPKLQFVGSCRNKEDEERLQKLKDRAKEL  331 (463)
T ss_pred             cc---------ccCCC-CEEEEEEeeeccCCHHHHHHHHHHHHHhccccCCCcEEEEEeCCCCcccHHHHHHHHHHHHHc
Confidence            10         01222 5678999999999999999999988653    46899999998642   1   12222    2


Q ss_pred             --cCcEEEecCCCHHHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCccceeee---CcceEEECCCH
Q 039338          361 --GHQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVD---DEFGFMFAPNV  435 (493)
Q Consensus       361 --~~~V~~~g~~~~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~---~~~G~~~~~d~  435 (493)
                        .++|.|+|+++.+++.++|+.||++++|+. .|+||++++|||++|+|||+++.||..+|++.+   +.+|++++ |+
T Consensus       332 ~L~~~V~f~g~v~~~el~~ll~~a~~~v~~s~-~E~FGivvlEAMA~G~PVIa~~~gGp~~eIV~~~~~g~tG~l~~-~~  409 (463)
T PLN02949        332 GLDGDVEFHKNVSYRDLVRLLGGAVAGLHSMI-DEHFGISVVEYMAAGAVPIAHNSAGPKMDIVLDEDGQQTGFLAT-TV  409 (463)
T ss_pred             CCCCcEEEeCCCCHHHHHHHHHhCcEEEeCCc-cCCCChHHHHHHHcCCcEEEeCCCCCcceeeecCCCCcccccCC-CH
Confidence              378999999999999999999999999995 599999999999999999999999875577765   56899886 99


Q ss_pred             HHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhcc
Q 039338          436 ESLHKTLEAAVSEGPMRLAQRGEACRQYAASMFTANKMALAYERLFLCIKNET  488 (493)
Q Consensus       436 ~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~i~~~~  488 (493)
                      ++++++|.++++++++.+++|++++++.+++ |||+++++++.+.++++++..
T Consensus       410 ~~la~ai~~ll~~~~~~r~~m~~~ar~~~~~-FS~e~~~~~~~~~i~~l~~~~  461 (463)
T PLN02949        410 EEYADAILEVLRMRETERLEIAAAARKRANR-FSEQRFNEDFKDAIRPILNSA  461 (463)
T ss_pred             HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH-cCHHHHHHHHHHHHHHHHhhh
Confidence            9999999999996478889999999999955 999999999999999988753

>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=2.1e-35  Score=286.67  Aligned_cols=334  Identities=23%  Similarity=0.281  Sum_probs=250.5

Q ss_pred             EEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCC--CCccc
Q 039338           85 KIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGE--ADKWR  162 (493)
Q Consensus        85 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~  162 (493)
                      ||++++..+.   ..||.++.+..++++|.+.||+|++++.....  ........       .. .+......  .....
T Consensus         1 kI~i~~~~~~---~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~--~~~~~~~~-------~~-~~~~~~~~~~~~~~~   67 (348)
T cd03820           1 KILFVIPSLG---NAGGAERVLSNLANALAEKGHEVTIISLDKGE--PPFYELDP-------KI-KVIDLGDKRDSKLLA   67 (348)
T ss_pred             CeEEEecccc---CCCChHHHHHHHHHHHHhCCCeEEEEecCCCC--CCccccCC-------cc-ceeecccccccchhc
Confidence            6899998763   27999999999999999999999999986653  11111110       11 11111110  01122


Q ss_pred             cccchHHHHHHhcCCCCcEEEeCccc---hhHHhhhcc-CcEEEEeccchhhhhhhhhhhhhhcCCCCccchHhHhHHHH
Q 039338          163 YSKGWEQFDEENQREPFDVVHSESVA---LPHWLARNV-TNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQG  238 (493)
Q Consensus       163 ~~~~~~~~~~~~~~~~~DiI~~~~~~---~~~~~~~~~-p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (493)
                      .......+.+.+++.+||+||++...   +...+.... | ++.+.|+........                    ....
T Consensus        68 ~~~~~~~~~~~l~~~~~d~i~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~~--------------------~~~~  126 (348)
T cd03820          68 RFKKLRRLRKLLKNNKPDVVISFLTSLLTFLASLGLKIVK-LIVSEHNSPDAYKKR--------------------LRRL  126 (348)
T ss_pred             cccchHHHHHhhcccCCCEEEEcCchHHHHHHHHhhcccc-EEEecCCCccchhhh--------------------hHHH
Confidence            33445667777778899999999864   222333333 5 888888753321100                    0000


Q ss_pred             HHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCCCCCCcEEEEEec
Q 039338          239 VMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVAG  318 (493)
Q Consensus       239 ~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~G  318 (493)
                      .     .+...++.+|.++++|+..+...   ...+..++.++|||++...+...             ..+++..++++|
T Consensus       127 ~-----~~~~~~~~~d~ii~~s~~~~~~~---~~~~~~~~~vi~~~~~~~~~~~~-------------~~~~~~~i~~~g  185 (348)
T cd03820         127 L-----LRRLLYRRADAVVVLTEEDRALY---YKKFNKNVVVIPNPLPFPPEEPS-------------SDLKSKRILAVG  185 (348)
T ss_pred             H-----HHHHHHhcCCEEEEeCHHHHHHh---hccCCCCeEEecCCcChhhcccc-------------CCCCCcEEEEEE
Confidence            0     23467889999999999998222   34467899999999998765433             012236788999


Q ss_pred             ccccccChHHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhhh------cCcEEEecCCCHHHHHHHHHHcCEEEeCCCCC
Q 039338          319 RLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDF------GHQVLVMGSMSPAELRAFYNAIDIFVNPTLRP  392 (493)
Q Consensus       319 r~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~l------~~~V~~~g~~~~~~~~~~~~~adv~v~ps~~~  392 (493)
                      ++.+.||++.++++++.+.+..++++|+++|+++....++++      .++|.+.|.  .+++.++|++||++++||.. 
T Consensus       186 ~~~~~K~~~~l~~~~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~ad~~i~ps~~-  262 (348)
T cd03820         186 RLVPQKGFDLLIEAWAKIAKKHPDWKLRIVGDGPEREALEALIKELGLEDRVILLGF--TKNIEEYYAKASIFVLTSRF-  262 (348)
T ss_pred             eeccccCHHHHHHHHHHHHhcCCCeEEEEEeCCCCHHHHHHHHHHcCCCCeEEEcCC--cchHHHHHHhCCEEEeCccc-
Confidence            999999999999999999888899999999998877665542      278999998  48999999999999999965 


Q ss_pred             CCCChHHHHHHHcCCcEEecCCCCCccceeeeCcceEEECC-CHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHhcCHH
Q 039338          393 QGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAP-NVESLHKTLEAAVSEGPMRLAQRGEACRQYAASMFTAN  471 (493)
Q Consensus       393 eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~~-d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~  471 (493)
                      ||+|++++|||++|+|||+++.++..++++.++.+|+++++ |+++++++|.+++++ ++.++++++++++.+++ |+|+
T Consensus       263 e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~ll~~-~~~~~~~~~~~~~~~~~-~~~~  340 (348)
T cd03820         263 EGFPMVLLEAMAFGLPVISFDCPTGPSEIIEDGVNGLLVPNGDVEALAEALLRLMED-EELRKRMGANARESAER-FSIE  340 (348)
T ss_pred             cccCHHHHHHHHcCCCEEEecCCCchHhhhccCcceEEeCCCCHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHH-hCHH
Confidence            99999999999999999999987665477777779999999 999999999999998 99999999999776654 9999


Q ss_pred             HHHHHHH
Q 039338          472 KMALAYE  478 (493)
Q Consensus       472 ~~~~~~~  478 (493)
                      +++++|.
T Consensus       341 ~~~~~~~  347 (348)
T cd03820         341 NIIKQWE  347 (348)
T ss_pred             HHHHHhc
Confidence            9999885

AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.

>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=5.1e-36  Score=301.98  Aligned_cols=281  Identities=21%  Similarity=0.286  Sum_probs=218.8

Q ss_pred             CCCcEEEeCccchh---HHh---hhccCcEEEEeccchhhhhhhhhhhhhhcCCCCccchHhHhHHHHHHHHHHHHHHhh
Q 039338          177 EPFDVVHSESVALP---HWL---ARNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQGVMLKVLNEIRFF  250 (493)
Q Consensus       177 ~~~DiI~~~~~~~~---~~~---~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (493)
                      .++|+||+|+....   +.+   ..++| ++++.||........++....      .........+...+...  +...+
T Consensus       172 ~~~dviH~~s~~~~g~~~~~~~~~~~~p-~I~t~Hg~~~~e~~~~~~~~~------~~~~~~~~~~~~~~~~l--~~~~~  242 (475)
T cd03813         172 PKADVYHAVSTGYAGLLGALAKARRGTP-FLLTEHGIYTRERKIELLQAD------WEMSYFRRLWIRFFESL--GRLAY  242 (475)
T ss_pred             CCCCEEeccCcchHHHHHHHHHHHhCCC-EEEecCCccHHHHHHHHHhcc------cchHHHHHHHHHHHHHH--HHHHH
Confidence            47899999976432   222   23457 999999975432221211110      00011111111222211  23668


Q ss_pred             ccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCCCCCCcEEEEEecccccccChHHHH
Q 039338          251 NKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVAGRLVKDKGHPLLH  330 (493)
Q Consensus       251 ~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Gr~~~~Kg~~~ll  330 (493)
                      +++|.|+++|+..++...+ +|.+.+++.+||||+|.+.|.+....        .. .+++++|+++||+.+.||++.++
T Consensus       243 ~~ad~Ii~~s~~~~~~~~~-~g~~~~ki~vIpNgid~~~f~~~~~~--------~~-~~~~~~i~~vGrl~~~Kg~~~li  312 (475)
T cd03813         243 QAADRITTLYEGNRERQIE-DGADPEKIRVIPNGIDPERFAPARRA--------RP-EKEPPVVGLIGRVVPIKDIKTFI  312 (475)
T ss_pred             HhCCEEEecCHHHHHHHHH-cCCCHHHeEEeCCCcCHHHcCCcccc--------cc-CCCCcEEEEEeccccccCHHHHH
Confidence            8999999999999987766 68888999999999999887654321        11 23347899999999999999999


Q ss_pred             HHHHHHHhhCCCeEEEEEeCCCcH----HHHh----hh--cCcEEEecCCCHHHHHHHHHHcCEEEeCCCCCCCCChHHH
Q 039338          331 EAFSKLMVKYPDVYLIVAGSGPWE----QRYK----DF--GHQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLM  400 (493)
Q Consensus       331 ~a~~~l~~~~~~~~l~i~G~g~~~----~~~~----~l--~~~V~~~g~~~~~~~~~~~~~adv~v~ps~~~eg~~~~~~  400 (493)
                      +|++.+.++.++++++|+|+++..    +.++    ++  .++|.|+|   .+++.++|+++|++|+||. .||+|++++
T Consensus       313 ~a~~~l~~~~p~~~l~IvG~g~~~~~~~~e~~~li~~l~l~~~V~f~G---~~~v~~~l~~aDv~vlpS~-~Eg~p~~vl  388 (475)
T cd03813         313 RAAAIVRKKIPDAEGWVIGPTDEDPEYAEECRELVESLGLEDNVKFTG---FQNVKEYLPKLDVLVLTSI-SEGQPLVIL  388 (475)
T ss_pred             HHHHHHHHhCCCeEEEEECCCCcChHHHHHHHHHHHHhCCCCeEEEcC---CccHHHHHHhCCEEEeCch-hhcCChHHH
Confidence            999999988899999999987422    2222    22  37999999   3789999999999999996 599999999


Q ss_pred             HHHHcCCcEEecCCCCCccceeee------CcceEEECC-CHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHhcCHHHH
Q 039338          401 EAMMSGKPVMASRFPSIKGTIVVD------DEFGFMFAP-NVESLHKTLEAAVSEGPMRLAQRGEACRQYAASMFTANKM  473 (493)
Q Consensus       401 EAm~~G~PvI~s~~~~~~~e~v~~------~~~G~~~~~-d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~  473 (493)
                      |||+||+|||+|+.|+.. |++.+      +.+|+++++ |+++++++|.++++| ++.++++++++++++++.|+|+++
T Consensus       389 EAma~G~PVVatd~g~~~-elv~~~~~~~~g~~G~lv~~~d~~~la~ai~~ll~~-~~~~~~~~~~a~~~v~~~~s~~~~  466 (475)
T cd03813         389 EAMAAGIPVVATDVGSCR-ELIEGADDEALGPAGEVVPPADPEALARAILRLLKD-PELRRAMGEAGRKRVERYYTLERM  466 (475)
T ss_pred             HHHHcCCCEEECCCCChH-HHhcCCcccccCCceEEECCCCHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHhCCHHHH
Confidence            999999999999999998 88888      569999999 999999999999999 999999999999999999999999


Q ss_pred             HHHHHHHHH
Q 039338          474 ALAYERLFL  482 (493)
Q Consensus       474 ~~~~~~~~~  482 (493)
                      +++|.++|+
T Consensus       467 ~~~y~~lY~  475 (475)
T cd03813         467 IDSYRRLYL  475 (475)
T ss_pred             HHHHHHHhC
Confidence            999999984

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog

>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=3.2e-35  Score=286.66  Aligned_cols=341  Identities=23%  Similarity=0.303  Sum_probs=256.2

Q ss_pred             EEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCC---CCcc
Q 039338           85 KIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGE---ADKW  161 (493)
Q Consensus        85 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~  161 (493)
                      ||++++..      .||.+.++..++++|.+.||+|++++.....  .....         .....+......   ...+
T Consensus         1 kIl~i~~~------~~g~~~~~~~l~~~L~~~g~~v~~~~~~~~~--~~~~~---------~~~~~~~~~~~~~~~~~~~   63 (359)
T cd03808           1 KILHIVTV------DGGLYSFRLPLIKALRAAGYEVHVVAPPGDE--LEELE---------ALGVKVIPIPLDRRGINPF   63 (359)
T ss_pred             CeeEEEec------chhHHHHHHHHHHHHHhcCCeeEEEecCCCc--ccccc---------cCCceEEeccccccccChH
Confidence            68999873      5899999999999999999999999987665  21000         111111111111   1222


Q ss_pred             ccccchHHHHHHhcCCCCcEEEeCccch--h-HHhh--hccCcEEEEeccchhhhhhhhhhhhhhcCCCCccchHhHhHH
Q 039338          162 RYSKGWEQFDEENQREPFDVVHSESVAL--P-HWLA--RNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSL  236 (493)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~DiI~~~~~~~--~-~~~~--~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (493)
                      ........+.+.+++.+||+||+++...  . ....  ...++++...|+..........                ....
T Consensus        64 ~~~~~~~~~~~~~~~~~~dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~----------------~~~~  127 (359)
T cd03808          64 KDLKALLRLYRLLRKERPDIVHTHTPKPGILGRLAARLAGVPKVIYTVHGLGFVFTSGGL----------------KRRL  127 (359)
T ss_pred             hHHHHHHHHHHHHHhcCCCEEEEccccchhHHHHHHHHcCCCCEEEEecCcchhhccchh----------------HHHH
Confidence            2233445566677788999999986421  1 1222  2335588888876433211100                0111


Q ss_pred             HHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCC-CCcEEEecCCccCCCccCCcccchhhhhhhCCCCCCcEEEE
Q 039338          237 QGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIP-SERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLG  315 (493)
Q Consensus       237 ~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~-~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~  315 (493)
                      ...+     ++..++.+|.++++|+...+.+.+.+..+ ..++.++++|+|.+.+.+....          ..+++++|+
T Consensus       128 ~~~~-----~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~i~  192 (359)
T cd03808         128 YLLL-----ERLALRFTDKVIFQNEDDRDLALKLGIIKKKKTVLIPGSGVDLDRFSPSPEP----------IPEDDPVFL  192 (359)
T ss_pred             HHHH-----HHHHHhhccEEEEcCHHHHHHHHHhcCCCcCceEEecCCCCChhhcCccccc----------cCCCCcEEE
Confidence            2222     23556788999999999999998865433 4577888999998776554321          123347899


Q ss_pred             EecccccccChHHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHh-----hh--cCcEEEecCCCHHHHHHHHHHcCEEEeC
Q 039338          316 VAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYK-----DF--GHQVLVMGSMSPAELRAFYNAIDIFVNP  388 (493)
Q Consensus       316 ~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~-----~l--~~~V~~~g~~~~~~~~~~~~~adv~v~p  388 (493)
                      ++|++.+.||++.+++++..+.+++++++|+++|.++......     ++  .++|.+.|+.  +++.++|++||++++|
T Consensus       193 ~~G~~~~~k~~~~li~~~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~~--~~~~~~~~~adi~i~p  270 (359)
T cd03808         193 FVARLLKDKGIDELLEAARILKAKGPNVRLLLVGDGDEENPAAILEIEKLGLEGRVEFLGFR--DDVPELLAAADVFVLP  270 (359)
T ss_pred             EEeccccccCHHHHHHHHHHHHhcCCCeEEEEEcCCCcchhhHHHHHHhcCCcceEEEeecc--ccHHHHHHhccEEEec
Confidence            9999999999999999999998878899999999987554332     22  2789999994  7999999999999999


Q ss_pred             CCCCCCCChHHHHHHHcCCcEEecCCCCCccceeeeCcceEEECC-CHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHh
Q 039338          389 TLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAP-NVESLHKTLEAAVSEGPMRLAQRGEACRQYAASM  467 (493)
Q Consensus       389 s~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~~-d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~  467 (493)
                      |.. ||+|++++|||++|+|||+++.++.. +++.++.+|+++++ |+++++++|.+++.+ ++.+.++++++++++.++
T Consensus       271 s~~-e~~~~~~~Ea~~~G~Pvi~s~~~~~~-~~i~~~~~g~~~~~~~~~~~~~~i~~l~~~-~~~~~~~~~~~~~~~~~~  347 (359)
T cd03808         271 SYR-EGLPRVLLEAMAMGRPVIATDVPGCR-EAVIDGVNGFLVPPGDAEALADAIERLIED-PELRARMGQAARKRAEEE  347 (359)
T ss_pred             Ccc-cCcchHHHHHHHcCCCEEEecCCCch-hhhhcCcceEEECCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHh
Confidence            965 99999999999999999999999998 88888999999998 899999999999998 899999999999999899


Q ss_pred             cCHHHHHHHHH
Q 039338          468 FTANKMALAYE  478 (493)
Q Consensus       468 fs~~~~~~~~~  478 (493)
                      |+|+.++++++
T Consensus       348 ~s~~~~~~~~~  358 (359)
T cd03808         348 FDEEIVVKKLL  358 (359)
T ss_pred             cCHHHHHHHhh
Confidence            99999999876

cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.

>PLN00142 sucrose synthase

Probab=100.00  E-value=1e-35  Score=302.97  Aligned_cols=382  Identities=16%  Similarity=0.130  Sum_probs=249.9

Q ss_pred             CCceEEEEEecc-C------CCCCCCCchHHHHHHHH--------HHHHhCCCEEE----EEecCCCCCCCCCCccccCC
Q 039338           81 KFTLKIAVFSRK-W------PISTTPGGMERHAHTLH--------VALARRGHRVH----IFTSPVDNINSPSISHQEND  141 (493)
Q Consensus        81 ~~~mkIl~v~~~-~------p~~~~~gG~~~~~~~l~--------~~L~~~G~~V~----v~~~~~~~~~~~~~~~~~~~  141 (493)
                      +.-|||++|+.+ |      ...+..||...++..++        +.|+++||+|+    |+|....+  ..........
T Consensus       277 p~~~~i~~iS~Hg~~~~~~~lG~~DtGGQ~vYVl~~aral~~el~~~l~~~G~~v~~~v~i~TR~i~~--~~~~~~~~~~  354 (815)
T PLN00142        277 PMVFNVVIFSPHGYFGQANVLGLPDTGGQVVYILDQVRALENEMLLRIKQQGLDIKPQILIVTRLIPD--AKGTTCNQRL  354 (815)
T ss_pred             hHhHhhheecccccccccccCCCCCCCCceehHHHHHHHHHHHHHHHHHhcCCCccceeEEEEeccCC--ccCCcccCcc
Confidence            345799999984 2      12346788888887544        67778899774    88875544  2111111100


Q ss_pred             CCCCCCCCceEeecCCCCc--------cccccchH-------HHH-HHh--cCCCCcEEEeCcc--chhHHh---hhccC
Q 039338          142 DGSNNKYPLLHFHEGEADK--------WRYSKGWE-------QFD-EEN--QREPFDVVHSESV--ALPHWL---ARNVT  198 (493)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~--------~~~~~~~~-------~~~-~~~--~~~~~DiI~~~~~--~~~~~~---~~~~p  198 (493)
                      . ...+....++.....+.        ......|.       .+. .+.  ...+||+||.|.+  ++.+..   ..++|
T Consensus       355 e-~v~~~~~~~I~rvP~g~~~~~l~~~i~ke~l~p~L~~f~~~~~~~~~~~~~~~PDlIHaHYwdsg~vA~~La~~lgVP  433 (815)
T PLN00142        355 E-KVSGTEHSHILRVPFRTEKGILRKWISRFDVWPYLETFAEDAASEILAELQGKPDLIIGNYSDGNLVASLLAHKLGVT  433 (815)
T ss_pred             e-eccCCCceEEEecCCCCCccccccccCHHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCccHHHHHHHHHHHhCCC
Confidence            0 11122223332211111        01111111       111 111  2346999999954  222222   23678


Q ss_pred             cEEEEeccchhhhh-hhhhhhhhhcCCCCccchHhHhHHHHHHHHHHHHHHhhccCCeEEEcChhHHHH-------HHHH
Q 039338          199 NLAVSWHGIALESL-QSGIFQDLTRKPLEPMSLAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEM-------LRDV  270 (493)
Q Consensus       199 ~~v~~~h~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~-------~~~~  270 (493)
                       .+.+.|...-... +++...   ...         ...+....++..|...+..||.||+.|......       +..+
T Consensus       434 -~v~T~HsL~k~K~~~~~~~~---~~~---------e~~y~~~~r~~aE~~a~~~Ad~IIasT~qEi~g~~~~i~qy~sh  500 (815)
T PLN00142        434 -QCTIAHALEKTKYPDSDIYW---KKF---------DDKYHFSCQFTADLIAMNHADFIITSTYQEIAGSKDTVGQYESH  500 (815)
T ss_pred             -EEEEcccchhhhccccCCcc---ccc---------chhhhhhhchHHHHHHHHhhhHHHhCcHHHHhcccchhhhhhcc
Confidence             9999996532111 111100   000         011111223334556778999999988766531       1111


Q ss_pred             ------------hCC--CCCcEEEecCCccCCCccCCcccch-----------------hhhhhhCCC-CCCcEEEEEec
Q 039338          271 ------------YQI--PSERVHVILNGINENEYGVDLSLGQ-----------------SFRSRIGIP-KNASLVLGVAG  318 (493)
Q Consensus       271 ------------~~~--~~~~v~vi~ngvd~~~~~~~~~~~~-----------------~~r~~~~i~-~~~~~~i~~~G  318 (493)
                                  .|+  ...++.+|++|+|...|.+......                 ..++.+|+. +.++.+|+++|
T Consensus       501 ~~f~~p~L~rvv~GId~~~~ki~VVppGvD~~~F~P~~~~~~rl~~l~n~I~~~l~~~~~~~e~lg~l~~~~kpvIl~VG  580 (815)
T PLN00142        501 TAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEKQKRLTSLHPSIEELLYSPEQNDEHIGYLKDRKKPIIFSMA  580 (815)
T ss_pred             cccccchhhhhhccccccccCeeEECCCCChhhcCCCChHHhhHHhhcccchhhcCChHHHHHHhCCccCCCCcEEEEEe
Confidence                        122  2558999999999998865332111                 123456652 23335788999


Q ss_pred             ccccccChHHHHHHHHHHHhhCCCeEEEEEeCCC------cHH------HHh----hh--cCcEEEecCC----CHHHHH
Q 039338          319 RLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGP------WEQ------RYK----DF--GHQVLVMGSM----SPAELR  376 (493)
Q Consensus       319 r~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~------~~~------~~~----~l--~~~V~~~g~~----~~~~~~  376 (493)
                      |+.+.||++.+++|+.++.+..++++|+|+|+|.      ..+      .+.    ++  .++|.|+|..    +.+++.
T Consensus       581 RL~~~KGid~LIeA~a~l~~l~~~~~LVIVGgg~d~~~s~d~ee~~el~~L~~La~~lgL~~~V~flG~~~~~~~~~eLy  660 (815)
T PLN00142        581 RLDRVKNLTGLVEWYGKNKRLRELVNLVVVGGFIDPSKSKDREEIAEIKKMHSLIEKYNLKGQFRWIAAQTNRVRNGELY  660 (815)
T ss_pred             cCcccCCHHHHHHHHHHHHHhCCCcEEEEEECCccccccccHHHHHHHHHHHHHHHHcCCCCcEEEcCCcCCcccHHHHH
Confidence            9999999999999999987776789999999862      111      111    22  2789999854    346777


Q ss_pred             HHHH-HcCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCccceeeeCcceEEECC-CHHHHHHHHHHHH----HcCc
Q 039338          377 AFYN-AIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAP-NVESLHKTLEAAV----SEGP  450 (493)
Q Consensus       377 ~~~~-~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~~-d~~~l~~~i~~ll----~~~~  450 (493)
                      .+++ ++|++|+||.+ |+||++++|||+||+|||+|+.||.+ |+|.++.+|+++++ |+++++++|.+++    .| +
T Consensus       661 r~iadaaDVfVlPS~~-EgFGLvvLEAMA~GlPVVATdvGG~~-EIV~dG~tG~LV~P~D~eaLA~aI~~lLekLl~D-p  737 (815)
T PLN00142        661 RYIADTKGAFVQPALY-EAFGLTVVEAMTCGLPTFATCQGGPA-EIIVDGVSGFHIDPYHGDEAANKIADFFEKCKED-P  737 (815)
T ss_pred             HHHHhhCCEEEeCCcc-cCCCHHHHHHHHcCCCEEEcCCCCHH-HHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCC-H
Confidence            7777 47999999964 99999999999999999999999998 99999999999999 9999999998765    56 8


Q ss_pred             HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 039338          451 MRLAQRGEACRQYAASMFTANKMALAYERLF  481 (493)
Q Consensus       451 ~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~  481 (493)
                      +.+++|++++++++.++|||+.++++++++.
T Consensus       738 ~lr~~mg~~Ar~rv~e~FSWe~~A~rll~L~  768 (815)
T PLN00142        738 SYWNKISDAGLQRIYECYTWKIYAERLLTLG  768 (815)
T ss_pred             HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence            9999999999999999999999999999875

>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=4.5e-35  Score=289.81  Aligned_cols=366  Identities=16%  Similarity=0.114  Sum_probs=239.8

Q ss_pred             EEEEeccCCCCCCCCchHHHHHHHHHHHHhC--CCEEEEEecCCCCCCCCC--C-ccccCCCCCCCCCCc-eEee-c---
Q 039338           86 IAVFSRKWPISTTPGGMERHAHTLHVALARR--GHRVHIFTSPVDNINSPS--I-SHQENDDGSNNKYPL-LHFH-E---  155 (493)
Q Consensus        86 Il~v~~~~p~~~~~gG~~~~~~~l~~~L~~~--G~~V~v~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~-~~~~-~---  155 (493)
                      |+|++++.   ...||+|+.++..+.+|.+.  ||+|+++|.....  ...  . ...+.......+... +... .   
T Consensus         3 ~~f~hp~~---~~ggg~ervl~~a~~~l~~~~~~~~v~i~t~~~~~--~~~~~l~~~~~~f~~~~~~~~~~~~~~~~~~~   77 (419)
T cd03806           3 VGFFHPYC---NAGGGGERVLWCAVRALQKRYPNNIVVIYTGDLDA--TPEEILEKVESRFNIELDRPRIVFFLLKYRKL   77 (419)
T ss_pred             EEEECCCC---CCCCCchHHHHHHHHHHHHhCCCcEEEEECCCCCC--CHHHHHHHHHHhcCeecCCCceEEEEecceee
Confidence            77888754   34459999999999999998  8999999988655  210  0 000000001111111 2211 1   


Q ss_pred             CCCCccccccch-------HHHHHHhcCCCCcEEEeCc-cchhHHhh---hccCcEEEEeccchhhhhhhhhhhhhh-cC
Q 039338          156 GEADKWRYSKGW-------EQFDEENQREPFDVVHSES-VALPHWLA---RNVTNLAVSWHGIALESLQSGIFQDLT-RK  223 (493)
Q Consensus       156 ~~~~~~~~~~~~-------~~~~~~~~~~~~DiI~~~~-~~~~~~~~---~~~p~~v~~~h~~~~~~~~~~~~~~~~-~~  223 (493)
                      .....+.....+       ....+.+.+.+|||++.+. .+....+.   ...| ++..+|-+....   +...... +.
T Consensus        78 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~pDv~i~~~g~~~~~~~~~~~~~~~-~i~y~h~P~~~~---d~l~~~~~~~  153 (419)
T cd03806          78 VEASTYPRFTLLGQALGSMILGLEALLKLVPDIFIDTMGYPFTYPLVRLLGGCP-VGAYVHYPTIST---DMLQKVRSRE  153 (419)
T ss_pred             eccccCCceeeHHHHHHHHHHHHHHHHhcCCCEEEEcCCcccHHHHHHHhcCCe-EEEEecCCcchH---HHHHHHhhcc
Confidence            111111111111       1111222245899988886 33222222   2345 999999321110   1111100 00


Q ss_pred             -----CC-Cccch--HhHhHHHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcc
Q 039338          224 -----PL-EPMSL--AFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLS  295 (493)
Q Consensus       224 -----~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~  295 (493)
                           .. .....  ...+.++..+...+ +...++.+|.++++|++.++.+.+.++. .+++.+|+||+|.+.+.+...
T Consensus       154 ~~~~~~~~~~~~~~~~~~k~~y~~~~~~~-~~~~~~~aD~ii~~S~~~~~~~~~~~~~-~~~~~vi~~gvd~~~~~~~~~  231 (419)
T cd03806         154 ASYNNSATIARSPVLSKAKLLYYRLFAFL-YGLAGSFADVVMVNSTWTRNHIRSLWKR-NTKPSIVYPPCDVEELLKLPL  231 (419)
T ss_pred             ccccCccchhccchHHHHHHHHHHHHHHH-HHHHhhcCCEEEECCHHHHHHHHHHhCc-CCCcEEEcCCCCHHHhccccc
Confidence                 00 00000  11122222222222 3466889999999999999999887653 358999999999877654321


Q ss_pred             cchhhhhhhCCCCCCcEEEEEecccccccChHHHHHHHHHHHhhCC-----CeEEEEEeCCCc------HHHHhh----h
Q 039338          296 LGQSFRSRIGIPKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYP-----DVYLIVAGSGPW------EQRYKD----F  360 (493)
Q Consensus       296 ~~~~~r~~~~i~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~-----~~~l~i~G~g~~------~~~~~~----l  360 (493)
                      .          ...++.+|+|+||+.+.||++.+++|+..+.+..+     +++|+|+|++..      .+.+++    +
T Consensus       232 ~----------~~~~~~~il~vgr~~~~K~~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~~~~~~~~~~L~~~~~~l  301 (419)
T cd03806         232 D----------EKTRENQILSIAQFRPEKNHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRNEDDEKRVEDLKLLAKEL  301 (419)
T ss_pred             c----------cccCCcEEEEEEeecCCCCHHHHHHHHHHHHHhCcccccCceEEEEEcCCCCcccHHHHHHHHHHHHHh
Confidence            0          11223688899999999999999999999988765     499999998642      222322    2


Q ss_pred             --cCcEEEecCCCHHHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCccceee---eCcceEEECCCH
Q 039338          361 --GHQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVV---DDEFGFMFAPNV  435 (493)
Q Consensus       361 --~~~V~~~g~~~~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~---~~~~G~~~~~d~  435 (493)
                        .++|.|+|.++++++.++|+.||++++|+.. |+||++++|||+||+|||+++.||..++++.   ++.+|++++ |+
T Consensus       302 ~l~~~V~f~g~v~~~~l~~~l~~adv~v~~s~~-E~Fgi~~lEAMa~G~pvIa~~~ggp~~~iv~~~~~g~~G~l~~-d~  379 (419)
T cd03806         302 GLEDKVEFVVNAPFEELLEELSTASIGLHTMWN-EHFGIGVVEYMAAGLIPLAHASGGPLLDIVVPWDGGPTGFLAS-TA  379 (419)
T ss_pred             CCCCeEEEecCCCHHHHHHHHHhCeEEEECCcc-CCcccHHHHHHHcCCcEEEEcCCCCchheeeccCCCCceEEeC-CH
Confidence              3799999999999999999999999999964 9999999999999999999998776547887   899999986 99


Q ss_pred             HHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHhcCHHHHHH
Q 039338          436 ESLHKTLEAAVSEGPMRLAQRGEACRQYAASMFTANKMAL  475 (493)
Q Consensus       436 ~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~  475 (493)
                      ++++++|.++++++++.++.+ .++++.+.++||++++.+
T Consensus       380 ~~la~ai~~ll~~~~~~~~~~-~~~~~~~~~~fs~~~f~~  418 (419)
T cd03806         380 EEYAEAIEKILSLSEEERLRI-RRAARSSVKRFSDEEFER  418 (419)
T ss_pred             HHHHHHHHHHHhCCHHHHHHH-HHHHHHHHHhhCHHHhcc
Confidence            999999999999844444445 555556777799998754

ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.

>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=1.7e-34  Score=280.76  Aligned_cols=337  Identities=25%  Similarity=0.304  Sum_probs=252.5

Q ss_pred             EEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCCCccccc
Q 039338           85 KIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEADKWRYS  164 (493)
Q Consensus        85 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (493)
                      ||+++++.+    ..||+++++..++++|.+.||+|++++.....  ........       ..................
T Consensus         1 kIl~~~~~~----~~gG~~~~~~~l~~~l~~~g~~v~v~~~~~~~--~~~~~~~~-------~~~~~~~~~~~~~~~~~~   67 (353)
T cd03811           1 KILFVIPSL----GGGGAERVLLNLANGLDKRGYDVTLVVLRDEG--DYLELLPS-------NVKLIPVRVLKLKSLRDL   67 (353)
T ss_pred             CeEEEeecc----cCCCcchhHHHHHHHHHhcCceEEEEEcCCCC--cccccccc-------chhhhceeeeecccccch
Confidence            689999876    36999999999999999999999999987655  21111100       000001111111222233


Q ss_pred             cchHHHHHHhcCCCCcEEEeCcc-c--hhHHhhh--ccCcEEEEeccchhhhhhhhhhhhhhcCCCCccchHhHhHHHHH
Q 039338          165 KGWEQFDEENQREPFDVVHSESV-A--LPHWLAR--NVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQGV  239 (493)
Q Consensus       165 ~~~~~~~~~~~~~~~DiI~~~~~-~--~~~~~~~--~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (493)
                      .....+.+.+++.+||+||++.. .  +...+..  +.| ++.+.|+..........                  ...  
T Consensus        68 ~~~~~~~~~~~~~~~dii~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~~~~------------------~~~--  126 (353)
T cd03811          68 LAILRLRRLLRKEKPDVVISHLTTTPNVLALLAARLGTK-LIVWEHNSLSLELKRKL------------------RLL--  126 (353)
T ss_pred             hHHHHHHHHHHhcCCCEEEEcCccchhHHHHHHhhcCCc-eEEEEcCcchhhhccch------------------hHH--
Confidence            34456677777889999999975 2  2222222  246 99999987543211100                  000  


Q ss_pred             HHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCCCCCCcEEEEEecc
Q 039338          240 MLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVAGR  319 (493)
Q Consensus       240 ~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Gr  319 (493)
                          ..+...++++|.++++|+.+++.+.+.++.+..++.+++||+|...+........    ..+.+.+ +++|+++|+
T Consensus       127 ----~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~----~~~~~~~-~~~i~~~g~  197 (353)
T cd03811         127 ----LLIRKLYRRADKIVAVSEGVKEDLLKLLGIPPDKIEVIYNPIDIEEIRALAEEPL----ELGIPPD-GPVILAVGR  197 (353)
T ss_pred             ----HHHHhhccccceEEEeccchhhhHHHhhcCCccccEEecCCcChhhcCcccchhh----hcCCCCC-ceEEEEEec
Confidence                2233668899999999999999999987766789999999999887765433211    2233334 488999999


Q ss_pred             cccccChHHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhh----h--cCcEEEecCCCHHHHHHHHHHcCEEEeCCCCCC
Q 039338          320 LVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKD----F--GHQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQ  393 (493)
Q Consensus       320 ~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~----l--~~~V~~~g~~~~~~~~~~~~~adv~v~ps~~~e  393 (493)
                      +.+.||++.+++++..+.+++++++|+++|.++..+.+++    +  .++|.+.|++  +++.++|+.||++++||.. |
T Consensus       198 ~~~~k~~~~~i~~~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~--~~~~~~~~~~d~~i~ps~~-e  274 (353)
T cd03811         198 LSPQKGFDTLIRAFALLRKEGPDARLVILGDGPLREELEALAKELGLADRVHFLGFQ--SNPYPYLKAADLFVLSSRY-E  274 (353)
T ss_pred             chhhcChHHHHHHHHHhhhcCCCceEEEEcCCccHHHHHHHHHhcCCCccEEEeccc--CCHHHHHHhCCEEEeCccc-C
Confidence            9999999999999999998888999999999877665543    2  2789999997  5789999999999999965 9


Q ss_pred             CCChHHHHHHHcCCcEEecCCCCCccceeeeCcceEEECC-CHHHH---HHHHHHHHHcCcHHHHHHHHHHHHHHHHhcC
Q 039338          394 GLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAP-NVESL---HKTLEAAVSEGPMRLAQRGEACRQYAASMFT  469 (493)
Q Consensus       394 g~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~~-d~~~l---~~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs  469 (493)
                      |+|++++|||++|+|||+++.++.. |++.++.+|+++++ |++++   .+++..+.++ ++.+.++++++++.+.++|+
T Consensus       275 ~~~~~~~Ea~~~G~PvI~~~~~~~~-e~i~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~  352 (353)
T cd03811         275 GFPNVLLEAMALGTPVVATDCPGPR-EILEDGENGLLVPVGDEAALAAAALALLDLLLD-PELRERLAAAARERVAREYS  352 (353)
T ss_pred             CCCcHHHHHHHhCCCEEEcCCCChH-HHhcCCCceEEECCCCHHHHHHHHHHHHhccCC-hHHHHHHHHHHHHHHHHHhc
Confidence            9999999999999999999999988 89999999999999 88888   7777788777 88888898888888887775

WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.

>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=2.4e-33  Score=273.54  Aligned_cols=342  Identities=22%  Similarity=0.218  Sum_probs=230.9

Q ss_pred             EEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCC----Cc
Q 039338           85 KIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEA----DK  160 (493)
Q Consensus        85 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~  160 (493)
                      ||++++..++   ..||+|+.+.+|++.|.+.  +|..+......  ......        ............+    ..
T Consensus         1 ~i~~~~~~~~---~~GG~E~~~~~l~~~l~~~--~v~~~~~~~~~--~~~~~~--------~~~~~~~~~~~~~~~~~~~   65 (351)
T cd03804           1 KVAIVHDWLV---NIGGGEKVVEALARLFPDA--DIFTLVDDPDK--LPRLLR--------LKKIRTSFIQKLPFARRRY   65 (351)
T ss_pred             CEEEEEeccc---cCCCHHHHHHHHHHhCCCC--CEEEEeecCCc--cchhhc--------CCceeechhhhchhhHhhH
Confidence            6999998763   5699999999999998653  33333222222  110000        0000000000011    11


Q ss_pred             cccccchHHHHHHhcCCCCcEEEeCccchhHHh--hhccCcEEEEeccchhhhhhhhhhhhhhcCCCCccchHhHhHHHH
Q 039338          161 WRYSKGWEQFDEENQREPFDVVHSESVALPHWL--ARNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQG  238 (493)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~DiI~~~~~~~~~~~--~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (493)
                      ..+......+.+.+...++|+|++++......+  ....| .+..+|......  .+............. .........
T Consensus        66 ~~~~~~~~~~~~~~~~~~~D~v~~~~~~~~~~~~~~~~~~-~~~~~h~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~  141 (351)
T cd03804          66 RKYLPLMPLAIEQFDLSGYDLVISSSHAVAKGVITRPDQL-HICYCHTPMRYA--WDLYHDYLKESGLGK-RLALRLLLH  141 (351)
T ss_pred             hhhCchhhHHHHhccccCCCEEEEcCcHHhccccCCCCCc-EEEEeCCchHHH--hcCchHhhhhcccch-hhHHHHHHH
Confidence            112222333444555678999999876443333  23445 677778642111  111111110000000 001111222


Q ss_pred             HHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCCCCCCcEEEEEec
Q 039338          239 VMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVAG  318 (493)
Q Consensus       239 ~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~G  318 (493)
                      .+.+  .+.+.++++|.++++|+.+++.+.+.++   .+..+|+||+|.+.+.+..             ..+ ..++++|
T Consensus       142 ~~~~--~~~~~~~~~d~ii~~S~~~~~~~~~~~~---~~~~vi~~~~d~~~~~~~~-------------~~~-~~il~~G  202 (351)
T cd03804         142 YLRI--WDRRSAARVDYFIANSRFVARRIKKYYG---RDATVIYPPVDTDRFTPAE-------------EKE-DYYLSVG  202 (351)
T ss_pred             HHHH--HHHHHhcCCCEEEECCHHHHHHHHHHhC---CCcEEECCCCCHhhcCcCC-------------CCC-CEEEEEE
Confidence            2222  2336689999999999999999988664   3568999999988775432             122 3477999


Q ss_pred             ccccccChHHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhhh-cCcEEEecCCCHHHHHHHHHHcCEEEeCCCCCCCCCh
Q 039338          319 RLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDF-GHQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDL  397 (493)
Q Consensus       319 r~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~l-~~~V~~~g~~~~~~~~~~~~~adv~v~ps~~~eg~~~  397 (493)
                      ++.+.||++.+++|++++    + ++|+++|+|+..+.+++. .++|.|+|+++++++.++|++||++++|| . |++|+
T Consensus       203 ~~~~~K~~~~li~a~~~~----~-~~l~ivG~g~~~~~l~~~~~~~V~~~g~~~~~~~~~~~~~ad~~v~ps-~-e~~g~  275 (351)
T cd03804         203 RLVPYKRIDLAIEAFNKL----G-KRLVVIGDGPELDRLRAKAGPNVTFLGRVSDEELRDLYARARAFLFPA-E-EDFGI  275 (351)
T ss_pred             cCccccChHHHHHHHHHC----C-CcEEEEECChhHHHHHhhcCCCEEEecCCCHHHHHHHHHhCCEEEECC-c-CCCCc
Confidence            999999999999999887    3 789999999887766653 48999999999999999999999999999 4 99999


Q ss_pred             HHHHHHHcCCcEEecCCCCCccceeeeCcceEEECC-CHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHhcCHHHHHHH
Q 039338          398 TLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAP-NVESLHKTLEAAVSEGPMRLAQRGEACRQYAASMFTANKMALA  476 (493)
Q Consensus       398 ~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~~-d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~  476 (493)
                      +++|||+||+|||+++.++.. |++.++.+|+++++ |+++++++|.+++++ ++   .+++++++.+++ |+|+++.++
T Consensus       276 ~~~Eama~G~Pvi~~~~~~~~-e~i~~~~~G~~~~~~~~~~la~~i~~l~~~-~~---~~~~~~~~~~~~-~~~~~~~~~  349 (351)
T cd03804         276 VPVEAMASGTPVIAYGKGGAL-ETVIDGVTGILFEEQTVESLAAAVERFEKN-ED---FDPQAIRAHAER-FSESRFREK  349 (351)
T ss_pred             hHHHHHHcCCCEEEeCCCCCc-ceeeCCCCEEEeCCCCHHHHHHHHHHHHhC-cc---cCHHHHHHHHHh-cCHHHHHHH
Confidence            999999999999999999988 89999999999998 999999999999998 53   233445555544 899999877


Q ss_pred             H
Q 039338          477 Y  477 (493)
Q Consensus       477 ~  477 (493)
                      +
T Consensus       350 ~  350 (351)
T cd03804         350 I  350 (351)
T ss_pred             h
Confidence            5

wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.

>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=100.00  E-value=7.5e-33  Score=273.64  Aligned_cols=216  Identities=23%  Similarity=0.326  Sum_probs=190.0

Q ss_pred             HhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCCCCCCcEEEEEecccccccChH
Q 039338          248 RFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVAGRLVKDKGHP  327 (493)
Q Consensus       248 ~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Gr~~~~Kg~~  327 (493)
                      .+++++|.++++|+..++.+.+.++...+++.+++||++...+....            ..++++.|+++|++.+.||++
T Consensus       179 ~~~~~~d~ii~~S~~~~~~l~~~~~~~~~ki~vi~~gv~~~~~~~~~------------~~~~~~~il~~Grl~~~Kg~~  246 (407)
T cd04946         179 YLLSSLDAVFPCSEQGRNYLQKRYPAYKEKIKVSYLGVSDPGIISKP------------SKDDTLRIVSCSYLVPVKRVD  246 (407)
T ss_pred             HHHhcCCEEEECCHHHHHHHHHHCCCccccEEEEECCcccccccCCC------------CCCCCEEEEEeeccccccCHH
Confidence            34678999999999999999998888888999999999987654321            123348899999999999999


Q ss_pred             HHHHHHHHHHhhCC--CeEEEEEeCCCcHHHHhhhc------CcEEEecCCCHHHHHHHHHH--cCEEEeCCCCCCCCCh
Q 039338          328 LLHEAFSKLMVKYP--DVYLIVAGSGPWEQRYKDFG------HQVLVMGSMSPAELRAFYNA--IDIFVNPTLRPQGLDL  397 (493)
Q Consensus       328 ~ll~a~~~l~~~~~--~~~l~i~G~g~~~~~~~~l~------~~V~~~g~~~~~~~~~~~~~--adv~v~ps~~~eg~~~  397 (493)
                      .+++++.++.+++|  +++++++|+|+..+.++++.      ++|.|+|+++++++.++|+.  +|++++||. .||+|+
T Consensus       247 ~li~a~~~l~~~~p~~~l~~~iiG~g~~~~~l~~~~~~~~~~~~V~f~G~v~~~e~~~~~~~~~~~v~v~~S~-~Eg~p~  325 (407)
T cd04946         247 LIIKALAALAKARPSIKIKWTHIGGGPLEDTLKELAESKPENISVNFTGELSNSEVYKLYKENPVDVFVNLSE-SEGLPV  325 (407)
T ss_pred             HHHHHHHHHHHhCCCceEEEEEEeCchHHHHHHHHHHhcCCCceEEEecCCChHHHHHHHhhcCCCEEEeCCc-cccccH
Confidence            99999999998875  56778899988776665432      67999999999999999986  788999996 599999


Q ss_pred             HHHHHHHcCCcEEecCCCCCccceeeeCcceEEECC--CHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHhcCHHHHHH
Q 039338          398 TLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAP--NVESLHKTLEAAVSEGPMRLAQRGEACRQYAASMFTANKMAL  475 (493)
Q Consensus       398 ~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~~--d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~  475 (493)
                      +++|||++|+|||+|+.||.+ |++.++.+|+++++  |+++++++|.++++| ++.+.+|++++++.++++|+++...+
T Consensus       326 ~llEAma~G~PVIas~vgg~~-e~i~~~~~G~l~~~~~~~~~la~~I~~ll~~-~~~~~~m~~~ar~~~~~~f~~~~~~~  403 (407)
T cd04946         326 SIMEAMSFGIPVIATNVGGTP-EIVDNGGNGLLLSKDPTPNELVSSLSKFIDN-EEEYQTMREKAREKWEENFNASKNYR  403 (407)
T ss_pred             HHHHHHHcCCCEEeCCCCCcH-HHhcCCCcEEEeCCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHcCHHHhHH
Confidence            999999999999999999998 89999989999986  799999999999998 89999999999999999999999988


Q ss_pred             HHH
Q 039338          476 AYE  478 (493)
Q Consensus       476 ~~~  478 (493)
                      ++.
T Consensus       404 ~~~  406 (407)
T cd04946         404 EFA  406 (407)
T ss_pred             Hhc
Confidence            875

AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.

>PHA01630 putative group 1 glycosyl transferase

Probab=100.00  E-value=4.8e-32  Score=257.89  Aligned_cols=217  Identities=16%  Similarity=0.206  Sum_probs=177.0

Q ss_pred             hccCCeEEEcChhHHHHHHHHhCCC-CCcEEEecCCccCCCccCCcccchhhhhhhCCCCCCcEEEEEecccccccChHH
Q 039338          250 FNKYAHHVAISDSCGEMLRDVYQIP-SERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVAGRLVKDKGHPL  328 (493)
Q Consensus       250 ~~~~d~ii~~S~~~~~~~~~~~~~~-~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Gr~~~~Kg~~~  328 (493)
                      .+++|.++++|+.+++.+.+ .+++ .+++.+||||+|.+.|.+....           .+.+++++++|++.+.||++.
T Consensus        92 ~~~ad~ii~~S~~~~~~l~~-~g~~~~~~i~vIpNGVd~~~f~~~~~~-----------~~~~~vl~~~g~~~~~Kg~d~  159 (331)
T PHA01630         92 NQPVDEIVVPSQWSKNAFYT-SGLKIPQPIYVIPHNLNPRMFEYKPKE-----------KPHPCVLAILPHSWDRKGGDI  159 (331)
T ss_pred             hccCCEEEECCHHHHHHHHH-cCCCCCCCEEEECCCCCHHHcCCCccc-----------cCCCEEEEEeccccccCCHHH
Confidence            46899999999999999987 4554 4689999999999877654221           123477888889999999999


Q ss_pred             HHHHHHHHHhhCCCeEEEEEeCCCcHHHHhhhcCcEEEecCCCHHHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcCCc
Q 039338          329 LHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDFGHQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKP  408 (493)
Q Consensus       329 ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~l~~~V~~~g~~~~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G~P  408 (493)
                      +++|++.+.++.++++++++|++.....+..+.   .+.|.++.+++.++|+.||++++||.. |+||++++|||+||+|
T Consensus       160 Li~A~~~l~~~~~~~~llivG~~~~~~~l~~~~---~~~~~v~~~~l~~~y~~aDv~v~pS~~-E~fgl~~lEAMA~G~P  235 (331)
T PHA01630        160 VVKIFHELQNEGYDFYFLIKSSNMLDPRLFGLN---GVKTPLPDDDIYSLFAGCDILFYPVRG-GAFEIPVIEALALGLD  235 (331)
T ss_pred             HHHHHHHHHhhCCCEEEEEEeCcccchhhcccc---ceeccCCHHHHHHHHHhCCEEEECCcc-ccCChHHHHHHHcCCC
Confidence            999999999888899999999765544332221   135668999999999999999999964 9999999999999999


Q ss_pred             EEecCCCCCccceeeeCcceEEE--------------------CCCHHHHHHHHHHHHHcC-cHHHHHHHHHHHHHHHHh
Q 039338          409 VMASRFPSIKGTIVVDDEFGFMF--------------------APNVESLHKTLEAAVSEG-PMRLAQRGEACRQYAASM  467 (493)
Q Consensus       409 vI~s~~~~~~~e~v~~~~~G~~~--------------------~~d~~~l~~~i~~ll~~~-~~~~~~~~~~~~~~~~~~  467 (493)
                      ||+|+.||.+ |++.++.+|+++                    ++|.+++++++.+++.++ ++.++++..++.....++
T Consensus       236 VIas~~gg~~-E~i~~~~ng~lv~~~~~~~~~~~~~~~~G~~v~~~~~~~~~~ii~~l~~~~~~~~~~~~~~~~~~~~~~  314 (331)
T PHA01630        236 VVVTEKGAWS-EWVLSNLDVYWIKSGRKPKLWYTNPIHVGYFLDPDIEDAYQKLLEALANWTPEKKKENLEGRAILYREN  314 (331)
T ss_pred             EEEeCCCCch-hhccCCCceEEeeecccccccccCCcccccccCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHh
Confidence            9999999988 888888776665                    447788999999999872 255555666666666777


Q ss_pred             cCHHHHHHHHHHHHHH
Q 039338          468 FTANKMALAYERLFLC  483 (493)
Q Consensus       468 fs~~~~~~~~~~~~~~  483 (493)
                      |||++++++++++|++
T Consensus       315 fs~~~ia~k~~~l~~~  330 (331)
T PHA01630        315 YSYNAIAKMWEKILEK  330 (331)
T ss_pred             CCHHHHHHHHHHHHhc
Confidence            9999999999999975

>TIGR02918 accessory Sec system glycosylation protein GtfA

Probab=100.00  E-value=3e-32  Score=272.53  Aligned_cols=279  Identities=16%  Similarity=0.195  Sum_probs=209.5

Q ss_pred             chHHHHHHhcCCCCcEEEeCccchh--HHhh-h-ccCcEEEEeccchhhhhhhhhhhhhhcCCCCccchHhHhHHHHHHH
Q 039338          166 GWEQFDEENQREPFDVVHSESVALP--HWLA-R-NVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQGVML  241 (493)
Q Consensus       166 ~~~~~~~~~~~~~~DiI~~~~~~~~--~~~~-~-~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (493)
                      ....+.+.+...++||+|++.....  ..+. . ..| .++.+|+-.......            .....   .+.....
T Consensus       199 l~~~f~~~L~~~~~di~i~dr~~~~~~~~~~~~~~~~-~v~~lH~~h~~~~~~------------~~~~~---~~~~~y~  262 (500)
T TIGR02918       199 LIAYFLKQLNLTKKDIIILDRSTGIGQAVLENKGPAK-LGVVVHAEHFSESAT------------NETYI---LWNNYYE  262 (500)
T ss_pred             HHHHHHHHHhCCCCCEEEEcCCcccchHHHhcCCCce-EEEEEChhhhcCccC------------cchhH---HHHHHHH
Confidence            3445545555678999999764322  1222 2 334 889999743211100            00000   0111111


Q ss_pred             HHHHHHHhhccCCeEEEcChhHHHHHHHHhC---CCCCcEEEecCCccCCCccCCcccchhhhhhhCCCCCCcEEEEEec
Q 039338          242 KVLNEIRFFNKYAHHVAISDSCGEMLRDVYQ---IPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVAG  318 (493)
Q Consensus       242 ~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~---~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~G  318 (493)
                      ..   ....+.+|.++++|+..++.+.+.++   .+..++.+||||++...+.+..             ..++.+|+++|
T Consensus       263 ~~---~~~~~~~D~iI~~S~~~~~~l~~~~~~~~~~~~ki~viP~g~~~~~~~~~~-------------~r~~~~il~vG  326 (500)
T TIGR02918       263 YQ---FSNADYIDFFITATDIQNQILKNQFKKYYNIEPRIYTIPVGSLDELQYPEQ-------------ERKPFSIITAS  326 (500)
T ss_pred             HH---HhchhhCCEEEECCHHHHHHHHHHhhhhcCCCCcEEEEcCCCcccccCccc-------------ccCCeEEEEEe
Confidence            11   13356789999999999888877553   3457899999998755433211             12236788999


Q ss_pred             ccccccChHHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhhh------cCcEEEecCCCHHHHHHHHHHcCEEEeCCCCC
Q 039338          319 RLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDF------GHQVLVMGSMSPAELRAFYNAIDIFVNPTLRP  392 (493)
Q Consensus       319 r~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~l------~~~V~~~g~~~~~~~~~~~~~adv~v~ps~~~  392 (493)
                      |+.+.||++.+++|+.++.++.|+++|+|+|+|+..+.++++      .++|.|+|+.   ++.++|+.||++|+||. .
T Consensus       327 rl~~~Kg~~~li~A~~~l~~~~p~~~l~i~G~G~~~~~l~~~i~~~~l~~~V~f~G~~---~~~~~~~~adv~v~pS~-~  402 (500)
T TIGR02918       327 RLAKEKHIDWLVKAVVKAKKSVPELTFDIYGEGGEKQKLQKIINENQAQDYIHLKGHR---NLSEVYKDYELYLSAST-S  402 (500)
T ss_pred             ccccccCHHHHHHHHHHHHhhCCCeEEEEEECchhHHHHHHHHHHcCCCCeEEEcCCC---CHHHHHHhCCEEEEcCc-c
Confidence            999999999999999999998999999999999877666543      3789999975   68899999999999995 5


Q ss_pred             CCCChHHHHHHHcCCcEEecCCC-CCccceeeeCcceEEECC-----C----HHHHHHHHHHHHHcCcHHHHHHHHHHHH
Q 039338          393 QGLDLTLMEAMMSGKPVMASRFP-SIKGTIVVDDEFGFMFAP-----N----VESLHKTLEAAVSEGPMRLAQRGEACRQ  462 (493)
Q Consensus       393 eg~~~~~~EAm~~G~PvI~s~~~-~~~~e~v~~~~~G~~~~~-----d----~~~l~~~i~~ll~~~~~~~~~~~~~~~~  462 (493)
                      ||||++++|||+||+|||+++.+ |.+ |++.++.+|+++++     |    +++|+++|.+++ + ++.+.+|++++++
T Consensus       403 Egfgl~~lEAma~G~PVI~~dv~~G~~-eiI~~g~nG~lv~~~~~~~d~~~~~~~la~~I~~ll-~-~~~~~~~~~~a~~  479 (500)
T TIGR02918       403 EGFGLTLMEAVGSGLGMIGFDVNYGNP-TFIEDNKNGYLIPIDEEEDDEDQIITALAEKIVEYF-N-SNDIDAFHEYSYQ  479 (500)
T ss_pred             ccccHHHHHHHHhCCCEEEecCCCCCH-HHccCCCCEEEEeCCccccchhHHHHHHHHHHHHHh-C-hHHHHHHHHHHHH
Confidence            99999999999999999999986 666 99999999999983     2    889999999999 4 4578999999999


Q ss_pred             HHHHhcCHHHHHHHHHHHHHHH
Q 039338          463 YAASMFTANKMALAYERLFLCI  484 (493)
Q Consensus       463 ~~~~~fs~~~~~~~~~~~~~~i  484 (493)
                      .+++ |||+.++++|.++++++
T Consensus       480 ~a~~-fs~~~v~~~w~~ll~~~  500 (500)
T TIGR02918       480 IAEG-FLTANIIEKWKKLVREV  500 (500)
T ss_pred             HHHh-cCHHHHHHHHHHHHhhC
Confidence            8765 99999999999999864

Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.

>PLN02275 transferase, transferring glycosyl groups

Probab=100.00  E-value=7.3e-32  Score=263.65  Aligned_cols=308  Identities=16%  Similarity=0.159  Sum_probs=207.6

Q ss_pred             CchHHHHHHHHHHHHhCCC-EEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCCCccccccch-----------
Q 039338          100 GGMERHAHTLHVALARRGH-RVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEADKWRYSKGW-----------  167 (493)
Q Consensus       100 gG~~~~~~~l~~~L~~~G~-~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------  167 (493)
                      +|.+.++..++..|+++|+ +|++++.....  . ..+.      .......++..............+           
T Consensus        15 ~g~~~r~~~~~~~l~~~~~~~v~vi~~~~~~--~-~~~~------~~~~~v~v~r~~~~~~~~~~~~~~~~~~~~~~~~~   85 (371)
T PLN02275         15 FGRSPRMQYHALSLARQASFQVDVVAYGGSE--P-IPAL------LNHPSIHIHLMVQPRLLQRLPRVLYALALLLKVAI   85 (371)
T ss_pred             CCCCHHHHHHHHHHHhcCCceEEEEEecCCC--C-CHHH------hcCCcEEEEECCCcccccccccchHHHHHHHHHHH
Confidence            6667789999999999875 89999875543  1 1111      111112222222111111111111           


Q ss_pred             --HHHHHH--hcCCCCcEEEeCccch-----hHHh-h--hccCcEEEEeccchhhhhhhhhhhhhhcCCCCccchHhHhH
Q 039338          168 --EQFDEE--NQREPFDVVHSESVAL-----PHWL-A--RNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKS  235 (493)
Q Consensus       168 --~~~~~~--~~~~~~DiI~~~~~~~-----~~~~-~--~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (493)
                        ..+...  .+..+||+||++++..     .+++ +  .+.| ++.++|+.+........      ...     .....
T Consensus        86 ~~~~~~~~~~~~~~~~DvV~~~~~~~~~~~~~~~~~~~~~~~p-~v~~~h~~~~~~~~~~~------~~~-----~~~~~  153 (371)
T PLN02275         86 QFLMLLWFLCVKIPRPDVFLVQNPPSVPTLAVVKLACWLRRAK-FVIDWHNFGYTLLALSL------GRS-----HPLVR  153 (371)
T ss_pred             HHHHHHHHHHhhCCCCCEEEEeCCCCcHHHHHHHHHHHHhCCC-EEEEcCCccHHHHhccc------CCC-----CHHHH
Confidence              111111  3467999999986431     1111 1  2446 88999987422111000      000     00011


Q ss_pred             HHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCCCCCCcEEEE
Q 039338          236 LQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLG  315 (493)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~  315 (493)
                      +...+     ++.+++++|.++++|+.+++.+.+.+|++   +.+|+||. .+.|.+....     .  .+..+.+.+++
T Consensus       154 ~~~~~-----e~~~~~~ad~ii~~S~~~~~~l~~~~g~~---i~vi~n~~-~~~f~~~~~~-----~--~~~~~~~~~i~  217 (371)
T PLN02275        154 LYRWY-----ERHYGKMADGHLCVTKAMQHELDQNWGIR---ATVLYDQP-PEFFRPASLE-----I--RLRPNRPALVV  217 (371)
T ss_pred             HHHHH-----HHHHHhhCCEEEECCHHHHHHHHHhcCCC---eEEECCCC-HHHcCcCCch-----h--cccCCCcEEEE
Confidence            22222     34668899999999999999998866764   88999985 4555443221     0  11223346777


Q ss_pred             EecccccccChHHHHHHHHHHH-----------------hhCCCeEEEEEeCCCcHHHHhhh----c-CcEEEec-CCCH
Q 039338          316 VAGRLVKDKGHPLLHEAFSKLM-----------------VKYPDVYLIVAGSGPWEQRYKDF----G-HQVLVMG-SMSP  372 (493)
Q Consensus       316 ~~Gr~~~~Kg~~~ll~a~~~l~-----------------~~~~~~~l~i~G~g~~~~~~~~l----~-~~V~~~g-~~~~  372 (493)
                      ++||+.++||++.+++|+..+.                 ++.++++|+++|+|+.++.++++    + +++.|.+ +++.
T Consensus       218 ~~grl~~~k~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~i~l~ivG~G~~~~~l~~~~~~~~l~~v~~~~~~~~~  297 (371)
T PLN02275        218 SSTSWTPDEDFGILLEAAVMYDRRVAARLNESDSASGKQSLYPRLLFIITGKGPQKAMYEEKISRLNLRHVAFRTMWLEA  297 (371)
T ss_pred             EeCceeccCCHHHHHHHHHHHHhhhhhccccccccccccccCCCeEEEEEeCCCCHHHHHHHHHHcCCCceEEEcCCCCH
Confidence            9999999999999999999874                 23578999999999987766543    3 5688766 6899


Q ss_pred             HHHHHHHHHcCEEEeCC--CCCCCCChHHHHHHHcCCcEEecCCCCCccceeeeCcceEEECCCHHHHHHHHHHHH
Q 039338          373 AELRAFYNAIDIFVNPT--LRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAPNVESLHKTLEAAV  446 (493)
Q Consensus       373 ~~~~~~~~~adv~v~ps--~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~~d~~~l~~~i~~ll  446 (493)
                      +++..+|++||++|+|+  ..+|++|++++|||+||+|||+++.|+.+ |++.++.+|++++ |+++|+++|.+++
T Consensus       298 ~~~~~~l~~aDv~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~gg~~-eiv~~g~~G~lv~-~~~~la~~i~~l~  371 (371)
T PLN02275        298 EDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIG-ELVKDGKNGLLFS-SSSELADQLLELL  371 (371)
T ss_pred             HHHHHHHHhCCEEEEeccccccccccHHHHHHHHCCCCEEEecCCChH-HHccCCCCeEEEC-CHHHHHHHHHHhC
Confidence            99999999999999763  34588999999999999999999999988 9999999999998 8999999998764

>PHA01633 putative glycosyl transferase group 1

Probab=100.00  E-value=4.6e-31  Score=247.56  Aligned_cols=306  Identities=17%  Similarity=0.278  Sum_probs=219.2

Q ss_pred             eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCCCcccc
Q 039338           84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEADKWRY  163 (493)
Q Consensus        84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (493)
                      ||-++++..|      +....+...+++.|++.|--|++++....-               ......+.+.+..+...+ 
T Consensus         1 ~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~-   58 (335)
T PHA01633          1 MKTAILTMNY------SSISNVSEDIAEVLRENGEIVTITKNPFYI---------------PKAEKLIVFIPFHPPSLN-   58 (335)
T ss_pred             CceEEEEech------hhhhhHHHHHHHHHHhCCcEEEEecCCccc---------------CccceEEEEeecCCcccc-
Confidence            7888898866      556677888999999998777776643322               111111222222211110 


Q ss_pred             ccchHHHHHHhcCCCCcEEEeCccc-hhHHhhhccCcEEEEeccchhhhhhhhhhhhhhcCCCCccchHhHhHHHHHHHH
Q 039338          164 SKGWEQFDEENQREPFDVVHSESVA-LPHWLARNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQGVMLK  242 (493)
Q Consensus       164 ~~~~~~~~~~~~~~~~DiI~~~~~~-~~~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (493)
                                            .+- ...++....+ .+.++|+....    ++                       .. 
T Consensus        59 ----------------------~~~~~~~~~~~~~~-~~tt~~g~~~~----~~-----------------------y~-   87 (335)
T PHA01633         59 ----------------------PYLYAYYQFKGKKY-FYTTCDGIPNI----EI-----------------------VN-   87 (335)
T ss_pred             ----------------------hHHhhhhhhcCCCc-eEEeeCCcCch----HH-----------------------HH-
Confidence                                  000 1112223334 88999986421    00                       01 


Q ss_pred             HHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCCCCCCcEEEEEeccccc
Q 039338          243 VLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVAGRLVK  322 (493)
Q Consensus       243 ~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Gr~~~  322 (493)
                           +.+.+.+.++++|+..++.+.+ .|++.. + +|++|+|.+.|.+........+++++....+.++|+++||+.+
T Consensus        88 -----~~m~~~~~vIavS~~t~~~L~~-~G~~~~-i-~I~~GVD~~~f~p~~~~~~~~r~~~~~~~~~~~~i~~vGRl~~  159 (335)
T PHA01633         88 -----KYLLQDVKFIPNSKFSAENLQE-VGLQVD-L-PVFHGINFKIVENAEKLVPQLKQKLDKDFPDTIKFGIVSGLTK  159 (335)
T ss_pred             -----HHHhcCCEEEeCCHHHHHHHHH-hCCCCc-e-eeeCCCChhhcCccchhhHHHHHHhCcCCCCCeEEEEEeCCcc
Confidence                 2334567899999999999987 577644 3 5789999998877554445677777654334478899999999


Q ss_pred             ccChHHHHHHHHHHHhhCCC----eEEEEEeCCCcHHHHhh--hcCcEEEe---cCCCHHHHHHHHHHcCEEEeCCCCCC
Q 039338          323 DKGHPLLHEAFSKLMVKYPD----VYLIVAGSGPWEQRYKD--FGHQVLVM---GSMSPAELRAFYNAIDIFVNPTLRPQ  393 (493)
Q Consensus       323 ~Kg~~~ll~a~~~l~~~~~~----~~l~i~G~g~~~~~~~~--l~~~V~~~---g~~~~~~~~~~~~~adv~v~ps~~~e  393 (493)
                      +||++.+++|++++.++.++    ++++++|.+    .+++  +.++|.|.   |+++++++.++|++||++|+||. .|
T Consensus       160 ~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~~----~~~~l~l~~~V~f~g~~G~~~~~dl~~~y~~aDifV~PS~-~E  234 (335)
T PHA01633        160 RKNMDLMLQVFNELNTKYPDIAKKIHFFVISHK----QFTQLEVPANVHFVAEFGHNSREYIFAFYGAMDFTIVPSG-TE  234 (335)
T ss_pred             ccCHHHHHHHHHHHHHhCCCccccEEEEEEcHH----HHHHcCCCCcEEEEecCCCCCHHHHHHHHHhCCEEEECCc-cc
Confidence            99999999999999887764    578888742    2333  44789998   56678999999999999999996 59


Q ss_pred             CCChHHHHHHHcCCcEEecCCCCCccceee------------------eCcceEEECC-CHHHHHHHHHHHHHcCcHHHH
Q 039338          394 GLDLTLMEAMMSGKPVMASRFPSIKGTIVV------------------DDEFGFMFAP-NVESLHKTLEAAVSEGPMRLA  454 (493)
Q Consensus       394 g~~~~~~EAm~~G~PvI~s~~~~~~~e~v~------------------~~~~G~~~~~-d~~~l~~~i~~ll~~~~~~~~  454 (493)
                      |||++++|||+||+|||+++.++++ |++.                  +.+.|+.++. |+++++++|.++++. . ...
T Consensus       235 gfGlvlLEAMA~G~PVVas~~~~l~-Ei~g~~~~~Li~~~~v~~~~~~~~g~g~~~~~~d~~~la~ai~~~~~~-~-~~~  311 (335)
T PHA01633        235 GFGMPVLESMAMGTPVIHQLMPPLD-EFTSWQWNLLIKSSKVEEYYDKEHGQKWKIHKFQIEDMANAIILAFEL-Q-DRE  311 (335)
T ss_pred             cCCHHHHHHHHcCCCEEEccCCCce-eecCCccceeeCCCCHHHhcCcccCceeeecCCCHHHHHHHHHHHHhc-c-Chh
Confidence            9999999999999999999999887 6432                  2345778888 999999999999776 3 234


Q ss_pred             HHHHHHHHHHHHhcCHHHHHHHHHH
Q 039338          455 QRGEACRQYAASMFTANKMALAYER  479 (493)
Q Consensus       455 ~~~~~~~~~~~~~fs~~~~~~~~~~  479 (493)
                      .++.++++.+++ |+|++++++|++
T Consensus       312 ~~~~~~~~~a~~-f~~~~~~~~~~~  335 (335)
T PHA01633        312 ERSMKLKELAKK-YDIRNLYTRFLE  335 (335)
T ss_pred             hhhHHHHHHHHh-cCHHHHHHHhhC
Confidence            446788887777 999999999863

>PLN02501 digalactosyldiacylglycerol synthase

Probab=100.00  E-value=1.1e-30  Score=257.16  Aligned_cols=355  Identities=13%  Similarity=0.094  Sum_probs=233.5

Q ss_pred             ceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhC-CCEEEEEecCCCCCCCCCCccccCCC---------------CCCC
Q 039338           83 TLKIAVFSRKWPISTTPGGMERHAHTLHVALARR-GHRVHIFTSPVDNINSPSISHQENDD---------------GSNN  146 (493)
Q Consensus        83 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~-G~~V~v~~~~~~~~~~~~~~~~~~~~---------------~~~~  146 (493)
                      +-+|+|||.--.  +...|....-+--|-+|++. |++|+++.+--.. .+...-..+.+.               ..+.
T Consensus       322 ~r~~~ivTtAsl--PWmTGtavnpL~rAayLa~~~~~~VtlviPWl~~-~dq~~vy~~~~~F~~p~eQe~~ir~wl~~r~  398 (794)
T PLN02501        322 KRHVAIVTTASL--PWMTGTAVNPLFRAAYLAKSAKQNVTLLVPWLCK-SDQELVYPNNLTFSSPEEQESYIRNWLEERI  398 (794)
T ss_pred             CCeEEEEEcccC--cccccccccHHHHHHHhcccCCceEEEEEecCCc-cccccccCCCcccCCHHHHHHHHHHHHHHhc
Confidence            356999998432  26677766556667788887 7999999875443 111111111110               0001


Q ss_pred             ---CCCceEeecCCC-CccccccchHHHHHHhcCCCCcEEEeCccchhHHh------hh-ccCcEEEEeccchhhhhhhh
Q 039338          147 ---KYPLLHFHEGEA-DKWRYSKGWEQFDEENQREPFDVVHSESVALPHWL------AR-NVTNLAVSWHGIALESLQSG  215 (493)
Q Consensus       147 ---~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~DiI~~~~~~~~~~~------~~-~~p~~v~~~h~~~~~~~~~~  215 (493)
                         ....+.+.+... ...+-......+.+.+...+|||||++++....|.      ++ .-| ++.++|.-...+....
T Consensus       399 g~~~~~~i~fYpg~~~~~~~SI~p~gdI~~~L~~f~PDVVHLatP~~LGw~~~Glr~ArKl~P-VVasyHTny~eYl~~y  477 (794)
T PLN02501        399 GFKADFKISFYPGKFSKERRSIIPAGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFNH-VVGVVHTNYLEYIKRE  477 (794)
T ss_pred             CCCCCceEEeecchhccCCccccchHHHHHHhhccCCCEEEECCchhhccHHHHHHHHHHcCC-eEEEEeCCcHHHHhHh
Confidence               111122211111 11112223456677777899999999987444333      22 226 8889997544321111


Q ss_pred             hhhhhhcCCCCccchHhHhHHHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcc
Q 039338          216 IFQDLTRKPLEPMSLAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLS  295 (493)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~  295 (493)
                              ..    ......+.+.+.+++.  +++  ||.++++|..+.+ +      +...+..+ ||||.+.|.+...
T Consensus       478 --------~~----g~L~~~llk~l~~~v~--r~h--cD~VIaPS~atq~-L------~~~vI~nV-nGVDte~F~P~~r  533 (794)
T PLN02501        478 --------KN----GALQAFFVKHINNWVT--RAY--CHKVLRLSAATQD-L------PKSVICNV-HGVNPKFLKIGEK  533 (794)
T ss_pred             --------cc----hhHHHHHHHHHHHHHH--Hhh--CCEEEcCCHHHHH-h------cccceeec-ccccccccCCcch
Confidence                    00    0111222222222222  122  8999999977763 2      12222222 7999999887654


Q ss_pred             cchhhhhhhCCCCCCcEEEEEecccccccChHHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhhhc----CcEEEecCCC
Q 039338          296 LGQSFRSRIGIPKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDFG----HQVLVMGSMS  371 (493)
Q Consensus       296 ~~~~~r~~~~i~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~l~----~~V~~~g~~~  371 (493)
                      .  ..+.+++++... ..++|+||+.+.||++.+++|++.+.++.++++|+|+|+|+..+.++++.    -+|.|+|.. 
T Consensus       534 ~--~~~r~lgi~~~~-kgiLfVGRLa~EKGld~LLeAla~L~~~~pnvrLvIVGDGP~reeLe~la~eLgL~V~FLG~~-  609 (794)
T PLN02501        534 V--AEERELGQQAFS-KGAYFLGKMVWAKGYRELIDLLAKHKNELDGFNLDVFGNGEDAHEVQRAAKRLDLNLNFLKGR-  609 (794)
T ss_pred             h--HHHHhcCCcccc-CceEEEEcccccCCHHHHHHHHHHHHhhCCCeEEEEEcCCccHHHHHHHHHHcCCEEEecCCC-
Confidence            2  223566665433 24679999999999999999999998878899999999999887776543    458999987 


Q ss_pred             HHHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCccceeeeCcceEEECCCHHHHHHHHHHHHHcCcH
Q 039338          372 PAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAPNVESLHKTLEAAVSEGPM  451 (493)
Q Consensus       372 ~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~~d~~~l~~~i~~ll~~~~~  451 (493)
                       ++..++|+.+|++|+||.. |+||++++||||||+|||+++.++.  +++.++.+|+++. |+++++++|.+++.+ +.
T Consensus       610 -dd~~~lyasaDVFVlPS~s-EgFGlVlLEAMA~GlPVVATd~pG~--e~V~~g~nGll~~-D~EafAeAI~~LLsd-~~  683 (794)
T PLN02501        610 -DHADDSLHGYKVFINPSIS-DVLCTATAEALAMGKFVVCADHPSN--EFFRSFPNCLTYK-TSEDFVAKVKEALAN-EP  683 (794)
T ss_pred             -CCHHHHHHhCCEEEECCCc-ccchHHHHHHHHcCCCEEEecCCCC--ceEeecCCeEecC-CHHHHHHHHHHHHhC-ch
Confidence             4566899999999999965 9999999999999999999999884  4577788888663 999999999999998 44


Q ss_pred             HHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 039338          452 RLAQRGEACRQYAASMFTANKMALAYERLF  481 (493)
Q Consensus       452 ~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~  481 (493)
                      ....+..      ...+||+.+++++++.=
T Consensus       684 ~rl~~~a------~~~~SWeAaadrLle~~  707 (794)
T PLN02501        684 QPLTPEQ------RYNLSWEAATQRFMEYS  707 (794)
T ss_pred             hhhHHHH------HhhCCHHHHHHHHHHhh
Confidence            3322221      22589999999998764

>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding

Probab=99.97  E-value=2.2e-29  Score=247.61  Aligned_cols=211  Identities=20%  Similarity=0.289  Sum_probs=181.4

Q ss_pred             hhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCCCCCCcEEEEEecccccccChHH
Q 039338          249 FFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVAGRLVKDKGHPL  328 (493)
Q Consensus       249 ~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Gr~~~~Kg~~~  328 (493)
                      .+.++|.++++|+..++.+.+.++. ..++.+||||++...+.+...           ...++..++++||+.+.||++.
T Consensus       154 ~~~~~d~ii~~s~~~~~~l~~~~~~-~~~v~~ip~g~~~~~~~~~~~-----------~~~~~~~i~~vgrl~~~K~~~~  221 (372)
T cd04949         154 NLDKVDGVIVATEQQKQDLQKQFGN-YNPIYTIPVGSIDPLKLPAQF-----------KQRKPHKIITVARLAPEKQLDQ  221 (372)
T ss_pred             ChhhCCEEEEccHHHHHHHHHHhCC-CCceEEEcccccChhhcccch-----------hhcCCCeEEEEEccCcccCHHH
Confidence            3578999999999999999987764 345999999999876654310           1122367889999999999999


Q ss_pred             HHHHHHHHHhhCCCeEEEEEeCCCcHHHHhh------hcCcEEEecCCCHHHHHHHHHHcCEEEeCCCCCCCCChHHHHH
Q 039338          329 LHEAFSKLMVKYPDVYLIVAGSGPWEQRYKD------FGHQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEA  402 (493)
Q Consensus       329 ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~------l~~~V~~~g~~~~~~~~~~~~~adv~v~ps~~~eg~~~~~~EA  402 (493)
                      +++++.++.+++|+++|+++|.|+....+++      +.++|.+.|+.  +++.++|+.||++|+||. .||+|++++||
T Consensus       222 li~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~v~~~g~~--~~~~~~~~~ad~~v~~S~-~Eg~~~~~lEA  298 (372)
T cd04949         222 LIKAFAKVVKQVPDATLDIYGYGDEEEKLKELIEELGLEDYVFLKGYT--RDLDEVYQKAQLSLLTSQ-SEGFGLSLMEA  298 (372)
T ss_pred             HHHHHHHHHHhCCCcEEEEEEeCchHHHHHHHHHHcCCcceEEEcCCC--CCHHHHHhhhhEEEeccc-ccccChHHHHH
Confidence            9999999999999999999999876654443      23789999965  689999999999999996 59999999999


Q ss_pred             HHcCCcEEecCCC-CCccceeeeCcceEEECC-CHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHhcCHHHHHHHH
Q 039338          403 MMSGKPVMASRFP-SIKGTIVVDDEFGFMFAP-NVESLHKTLEAAVSEGPMRLAQRGEACRQYAASMFTANKMALAY  477 (493)
Q Consensus       403 m~~G~PvI~s~~~-~~~~e~v~~~~~G~~~~~-d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~  477 (493)
                      |++|+|||+++.+ |.. +++.++.+|+++++ |+++++++|.+++++ ++.+.++++++++.++ +|||++++++|
T Consensus       299 ma~G~PvI~~~~~~g~~-~~v~~~~~G~lv~~~d~~~la~~i~~ll~~-~~~~~~~~~~a~~~~~-~~s~~~~~~~w  372 (372)
T cd04949         299 LSHGLPVISYDVNYGPS-EIIEDGENGYLVPKGDIEALAEAIIELLND-PKLLQKFSEAAYENAE-RYSEENVWEKW  372 (372)
T ss_pred             HhCCCCEEEecCCCCcH-HHcccCCCceEeCCCcHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHH-HhhHHHHHhcC
Confidence            9999999999987 555 89999999999999 999999999999999 8999999999999954 59999998864

In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra

>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]

Probab=99.97  E-value=3.9e-28  Score=236.54  Aligned_cols=394  Identities=20%  Similarity=0.247  Sum_probs=265.4

Q ss_pred             eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCC--C--------------CC-C
Q 039338           84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDD--G--------------SN-N  146 (493)
Q Consensus        84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~--~--------------~~-~  146 (493)
                      |||++++.+.-|....||.+..+..|.++|++.|++|.|+.+....+..........+.  .              .. .
T Consensus         1 M~Il~v~~E~~p~vK~GGLaDv~~alpk~L~~~g~~v~v~lP~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (487)
T COG0297           1 MKILFVASEIFPFVKTGGLADVVGALPKALAKRGVDVRVLLPSYPKVQKEWRDLLKVVGKFGVLKGGRAQLFIVKEYGKD   80 (487)
T ss_pred             CcceeeeeeecCccccCcHHHHHHHhHHHHHhcCCeEEEEcCCchhhhhhhccccceeeEeeeeecccceEEEEEeeccc
Confidence            89999999875557999999999999999999999999999877653333222211110  0              00 1


Q ss_pred             CCCceEeecCCCCccc--------cc---cchHHH----HHHhcC----CCCcEEEeCccc---hhHHhhh------ccC
Q 039338          147 KYPLLHFHEGEADKWR--------YS---KGWEQF----DEENQR----EPFDVVHSESVA---LPHWLAR------NVT  198 (493)
Q Consensus       147 ~~~~~~~~~~~~~~~~--------~~---~~~~~~----~~~~~~----~~~DiI~~~~~~---~~~~~~~------~~p  198 (493)
                      ......++. .+..+.        +.   ..+..+    .+....    ..|||||+|++.   ++.++..      .+|
T Consensus        81 ~~v~~~lid-~~~~f~r~~~~~~~~~d~~~Rf~~F~~a~~~~~~~~~~~~~pDIvH~hDWqt~L~~~~lk~~~~~~~~i~  159 (487)
T COG0297          81 GGVDLYLID-NPALFKRPDSTLYGYYDNAERFAFFSLAAAELAPLGLISWLPDIVHAHDWQTGLLPAYLKQRYRSGYIIP  159 (487)
T ss_pred             CCCcEEEec-ChhhcCccccccCCCCcHHHHHHHHHHHHHHHhhhcCCCCCCCEEEeecHHHHHHHHHHhhcccccccCC
Confidence            101222221 111111        11   011111    111111    469999999862   3334433      345


Q ss_pred             cEEEEeccchhhhhhhhhhhhhhcCCCCccchHhHhHHHHHHHHHHHHHHhhccCCeEEEcChhHHHHHH-HHhC-----
Q 039338          199 NLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLR-DVYQ-----  272 (493)
Q Consensus       199 ~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~-~~~~-----  272 (493)
                       .|.|+|...+..............|.......   .+. .....--++..+..+|.+.++|+..++.+. ..+|     
T Consensus       160 -tVfTIHNl~~qG~~~~~~~~~lgLp~~~~~~~---~l~-~~~~~~~lK~gi~~ad~vttVSptYa~Ei~t~~~g~gl~g  234 (487)
T COG0297         160 -TVFTIHNLAYQGLFRLQYLEELGLPFEAYASF---GLE-FYGQISFLKGGLYYADAVTTVSPTYAGEIYTPEYGEGLEG  234 (487)
T ss_pred             -eEEEEeeceeecccchhhHHHhcCCHHHhhhc---eee-ecCcchhhhhhheeccEEEEECHHHHHhhccccccccchh
Confidence             99999987765544422222222221110000   000 000001122456789999999999988776 2221     


Q ss_pred             ---CCCCcEEEecCCccCCCccCCccc-----------------chhhhhhhCCCCC-CcEEEEEecccccccChHHHHH
Q 039338          273 ---IPSERVHVILNGINENEYGVDLSL-----------------GQSFRSRIGIPKN-ASLVLGVAGRLVKDKGHPLLHE  331 (493)
Q Consensus       273 ---~~~~~v~vi~ngvd~~~~~~~~~~-----------------~~~~r~~~~i~~~-~~~~i~~~Gr~~~~Kg~~~ll~  331 (493)
                         .-..++.-|-||+|.+.+.|..+.                 +..+++++|++.+ +.+.++++||+..+||++.+++
T Consensus       235 ~l~~~~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~~k~~nk~~L~~~~gL~~~~~~pl~~~vsRl~~QKG~dl~~~  314 (487)
T COG0297         235 LLSWRSGKLSGILNGIDYDLWNPETDPYIAANYSAEVLPAKAENKVALQERLGLDVDLPGPLFGFVSRLTAQKGLDLLLE  314 (487)
T ss_pred             hhhhccccEEEEEeeEEecccCcccccchhccCCccchhhhHHHHHHHHHHhCCCCCCCCcEEEEeeccccccchhHHHH
Confidence               123678999999999988765442                 3456678899854 3388999999999999999999


Q ss_pred             HHHHHHhhCCCeEEEEEeCCC--cHHHHhhhc----CcEEEecCCCHHHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHc
Q 039338          332 AFSKLMVKYPDVYLIVAGSGP--WEQRYKDFG----HQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMS  405 (493)
Q Consensus       332 a~~~l~~~~~~~~l~i~G~g~--~~~~~~~l~----~~V~~~g~~~~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~  405 (493)
                      ++..+.++.  +++++.|.|.  +.+.+..+.    .++.+.-..+..-...+|+.+|++++||. .|++|++-++||++
T Consensus       315 ~i~~~l~~~--~~~vilG~gd~~le~~~~~la~~~~~~~~~~i~~~~~la~~i~agaD~~lmPSr-fEPcGL~ql~amry  391 (487)
T COG0297         315 AIDELLEQG--WQLVLLGTGDPELEEALRALASRHPGRVLVVIGYDEPLAHLIYAGADVILMPSR-FEPCGLTQLYAMRY  391 (487)
T ss_pred             HHHHHHHhC--ceEEEEecCcHHHHHHHHHHHHhcCceEEEEeeecHHHHHHHHhcCCEEEeCCc-CcCCcHHHHHHHHc
Confidence            999999874  8999999982  223333332    56666666777888899999999999995 59999999999999


Q ss_pred             CCcEEecCCCCCccceeee--------CcceEEECC-CHHHHHHHHHHHHHcC--cHH-HHHHHHHHHHHHHHhcCHHHH
Q 039338          406 GKPVMASRFPSIKGTIVVD--------DEFGFMFAP-NVESLHKTLEAAVSEG--PMR-LAQRGEACRQYAASMFTANKM  473 (493)
Q Consensus       406 G~PvI~s~~~~~~~e~v~~--------~~~G~~~~~-d~~~l~~~i~~ll~~~--~~~-~~~~~~~~~~~~~~~fs~~~~  473 (493)
                      |+++|+..+||++ +.|.+        .++|++|.+ ++++++.+|.+.+.-.  ++. .+.+..++   +..+|+|+..
T Consensus       392 GtvpIv~~tGGLa-dTV~~~~~~~~~~~gtGf~f~~~~~~~l~~al~rA~~~y~~~~~~w~~~~~~~---m~~d~sw~~s  467 (487)
T COG0297         392 GTLPIVRETGGLA-DTVVDRNEWLIQGVGTGFLFLQTNPDHLANALRRALVLYRAPPLLWRKVQPNA---MGADFSWDLS  467 (487)
T ss_pred             CCcceEcccCCcc-ceecCccchhccCceeEEEEecCCHHHHHHHHHHHHHHhhCCHHHHHHHHHhh---cccccCchhH
Confidence            9999999999999 55543        689999999 9999999999887642  222 44444443   3356999999


Q ss_pred             HHHHHHHHHHHhhcccC
Q 039338          474 ALAYERLFLCIKNETFC  490 (493)
Q Consensus       474 ~~~~~~~~~~i~~~~~~  490 (493)
                      +.+|.++|+.+++..+.
T Consensus       468 a~~y~~lY~~~~~~~~~  484 (487)
T COG0297         468 AKEYVELYKPLLSKPFW  484 (487)
T ss_pred             HHHHHHHHHHHhccccc
Confidence            99999999999887653

>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional

Probab=99.97  E-value=2.8e-28  Score=238.09  Aligned_cols=326  Identities=19%  Similarity=0.146  Sum_probs=226.8

Q ss_pred             eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCC----C
Q 039338           84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEA----D  159 (493)
Q Consensus        84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~  159 (493)
                      |||++++.      ..||.++.+.+|+++|.++||+|++++.....  ..  ..      .......++......    .
T Consensus         2 ~~i~i~~~------g~gG~~~~~~~la~~L~~~g~ev~vv~~~~~~--~~--~~------~~~~g~~~~~~~~~~~~~~~   65 (357)
T PRK00726          2 KKILLAGG------GTGGHVFPALALAEELKKRGWEVLYLGTARGM--EA--RL------VPKAGIEFHFIPSGGLRRKG   65 (357)
T ss_pred             cEEEEEcC------cchHhhhHHHHHHHHHHhCCCEEEEEECCCch--hh--hc------cccCCCcEEEEeccCcCCCC
Confidence            89999986      45899999999999999999999999875532  10  11      011111222222110    0


Q ss_pred             -------ccccccchHHHHHHhcCCCCcEEEeCcc--chhHHh---hhccCcEEEEeccchhhhhhhhhhhhhhcCCCCc
Q 039338          160 -------KWRYSKGWEQFDEENQREPFDVVHSESV--ALPHWL---ARNVTNLAVSWHGIALESLQSGIFQDLTRKPLEP  227 (493)
Q Consensus       160 -------~~~~~~~~~~~~~~~~~~~~DiI~~~~~--~~~~~~---~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~  227 (493)
                             .......+..+.+.+++.+||+||+|+.  .+..++   ..++| ++.+.|+.+.                  
T Consensus        66 ~~~~l~~~~~~~~~~~~~~~~ik~~~pDvv~~~~~~~~~~~~~~~~~~~~p-~v~~~~~~~~------------------  126 (357)
T PRK00726         66 SLANLKAPFKLLKGVLQARKILKRFKPDVVVGFGGYVSGPGGLAARLLGIP-LVIHEQNAVP------------------  126 (357)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCcchhHHHHHHHHcCCC-EEEEcCCCCc------------------
Confidence                   1122344556667777889999999974  222222   23445 6665554210                  


Q ss_pred             cchHhHhHHHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCCC
Q 039338          228 MSLAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIP  307 (493)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~  307 (493)
                            .    ..     .+..++.+|.+++.++...   .+   .+..++++++||+|.+.+.+..     .+++++++
T Consensus       127 ------~----~~-----~r~~~~~~d~ii~~~~~~~---~~---~~~~~i~vi~n~v~~~~~~~~~-----~~~~~~~~  180 (357)
T PRK00726        127 ------G----LA-----NKLLARFAKKVATAFPGAF---PE---FFKPKAVVTGNPVREEILALAA-----PPARLAGR  180 (357)
T ss_pred             ------c----HH-----HHHHHHHhchheECchhhh---hc---cCCCCEEEECCCCChHhhcccc-----hhhhccCC
Confidence                  0    01     1134567898998887442   12   4678999999999987654321     12345665


Q ss_pred             CCCcEEEEEecccccccChHHHH-HHHHHHHhhCCCeEEEEEeCCCcHHHHhh--hcCcEEEecCCCHHHHHHHHHHcCE
Q 039338          308 KNASLVLGVAGRLVKDKGHPLLH-EAFSKLMVKYPDVYLIVAGSGPWEQRYKD--FGHQVLVMGSMSPAELRAFYNAIDI  384 (493)
Q Consensus       308 ~~~~~~i~~~Gr~~~~Kg~~~ll-~a~~~l~~~~~~~~l~i~G~g~~~~~~~~--l~~~V~~~g~~~~~~~~~~~~~adv  384 (493)
                      ++. .+++++|+....|+...++ +|+.++.+. + ..++++|+|+.++..+.  ++-+|.+.|++  +++.++|++||+
T Consensus       181 ~~~-~~i~~~gg~~~~~~~~~~l~~a~~~~~~~-~-~~~~~~G~g~~~~~~~~~~~~~~v~~~g~~--~~~~~~~~~~d~  255 (357)
T PRK00726        181 EGK-PTLLVVGGSQGARVLNEAVPEALALLPEA-L-QVIHQTGKGDLEEVRAAYAAGINAEVVPFI--DDMAAAYAAADL  255 (357)
T ss_pred             CCC-eEEEEECCcHhHHHHHHHHHHHHHHhhhC-c-EEEEEcCCCcHHHHHHHhhcCCcEEEeehH--hhHHHHHHhCCE
Confidence            555 5667888887778765555 999888654 3 56778899876544333  23349999998  799999999999


Q ss_pred             EEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCcc-------ceeeeCcceEEECC-C--HHHHHHHHHHHHHcCcHHHH
Q 039338          385 FVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKG-------TIVVDDEFGFMFAP-N--VESLHKTLEAAVSEGPMRLA  454 (493)
Q Consensus       385 ~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~-------e~v~~~~~G~~~~~-d--~~~l~~~i~~ll~~~~~~~~  454 (493)
                      ++.++    | +.+++|||++|+|||++..++..+       +.+.+.++|+++++ |  +++++++|.++++| ++.++
T Consensus       256 ~i~~~----g-~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~l~~~i~~ll~~-~~~~~  329 (357)
T PRK00726        256 VICRA----G-ASTVAELAAAGLPAILVPLPHAADDHQTANARALVDAGAALLIPQSDLTPEKLAEKLLELLSD-PERLE  329 (357)
T ss_pred             EEECC----C-HHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHHCCCEEEEEcccCCHHHHHHHHHHHHcC-HHHHH
Confidence            99855    2 589999999999999997653221       45677889999987 6  99999999999999 99999


Q ss_pred             HHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 039338          455 QRGEACRQYAASMFTANKMALAYERLFL  482 (493)
Q Consensus       455 ~~~~~~~~~~~~~fs~~~~~~~~~~~~~  482 (493)
                      +|++++++++++ ++.+.+++.+.++.+
T Consensus       330 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~  356 (357)
T PRK00726        330 AMAEAARALGKP-DAAERLADLIEELAR  356 (357)
T ss_pred             HHHHHHHhcCCc-CHHHHHHHHHHHHhh
Confidence            999999998755 899999988887764

>PRK13609 diacylglycerol glucosyltransferase; Provisional

Probab=99.96  E-value=4.1e-27  Score=231.70  Aligned_cols=343  Identities=16%  Similarity=0.135  Sum_probs=229.1

Q ss_pred             CceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCC--CCCCCCc-eEee---c
Q 039338           82 FTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDG--SNNKYPL-LHFH---E  155 (493)
Q Consensus        82 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~---~  155 (493)
                      +.|||++++..+     .+|+...+..++++|.++||+|++++...... .+.........+  .....+. +...   .
T Consensus         3 ~~~rili~t~~~-----G~GH~~~a~al~~~l~~~g~~~~~~~d~~~~~-~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~   76 (380)
T PRK13609          3 KNPKVLILTAHY-----GNGHVQVAKTLEQTFRQKGIKDVIVCDLFGES-HPVITEITKYLYLKSYTIGKELYRLFYYGV   76 (380)
T ss_pred             CCCeEEEEEcCC-----CchHHHHHHHHHHHHHhcCCCcEEEEEhHHhc-chHHHHHHHHHHHHHHHHhHHHHHHHHhcc
Confidence            468999999853     45999999999999999999977776554331 110010000000  0000000 0000   0


Q ss_pred             CCC---Ccc--ccccchHHHHHHhcCCCCcEEEeCccchh--HHhh---hccCcEEEEeccchhhhhhhhhhhhhhcCCC
Q 039338          156 GEA---DKW--RYSKGWEQFDEENQREPFDVVHSESVALP--HWLA---RNVTNLAVSWHGIALESLQSGIFQDLTRKPL  225 (493)
Q Consensus       156 ~~~---~~~--~~~~~~~~~~~~~~~~~~DiI~~~~~~~~--~~~~---~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~  225 (493)
                      ...   ...  ........+.+.+++.+||+||++.+...  .+..   ..+| ++...+++...               
T Consensus        77 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~~~~~~~~~~~~~~~~~~ip-~~~~~td~~~~---------------  140 (380)
T PRK13609         77 EKIYDKKIFSWYANFGRKRLKLLLQAEKPDIVINTFPIIAVPELKKQTGISIP-TYNVLTDFCLH---------------  140 (380)
T ss_pred             CcccchHHHHHHHHHHHHHHHHHHHHhCcCEEEEcChHHHHHHHHHhcCCCCC-eEEEeCCCCCC---------------
Confidence            000   000  01112356777778899999999865322  2211   1245 55444432100               


Q ss_pred             CccchHhHhHHHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhC
Q 039338          226 EPMSLAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIG  305 (493)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~  305 (493)
                                          ..++++++|.++++|+.+++.+.+ +|++.+++.+++++++...... . ....++++++
T Consensus       141 --------------------~~~~~~~ad~i~~~s~~~~~~l~~-~gi~~~ki~v~G~p~~~~f~~~-~-~~~~~~~~~~  197 (380)
T PRK13609        141 --------------------KIWVHREVDRYFVATDHVKKVLVD-IGVPPEQVVETGIPIRSSFELK-I-NPDIIYNKYQ  197 (380)
T ss_pred             --------------------cccccCCCCEEEECCHHHHHHHHH-cCCChhHEEEECcccChHHcCc-C-CHHHHHHHcC
Confidence                                014567899999999999999988 6888889999877775432221 1 2345788999


Q ss_pred             CCCCCcEEEEEecccccccChHHHHHHHHHHHhhCCCeEEEEEeC-C-CcHHHHhhh----cCcEEEecCCCHHHHHHHH
Q 039338          306 IPKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGS-G-PWEQRYKDF----GHQVLVMGSMSPAELRAFY  379 (493)
Q Consensus       306 i~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~-g-~~~~~~~~l----~~~V~~~g~~~~~~~~~~~  379 (493)
                      +++++++++++.|++...|+++.+++++.+.    ++++++++|+ + +..+.++++    .++|+|+|++  +++.++|
T Consensus       198 l~~~~~~il~~~G~~~~~k~~~~li~~l~~~----~~~~~viv~G~~~~~~~~l~~~~~~~~~~v~~~g~~--~~~~~l~  271 (380)
T PRK13609        198 LCPNKKILLIMAGAHGVLGNVKELCQSLMSV----PDLQVVVVCGKNEALKQSLEDLQETNPDALKVFGYV--ENIDELF  271 (380)
T ss_pred             CCCCCcEEEEEcCCCCCCcCHHHHHHHHhhC----CCcEEEEEeCCCHHHHHHHHHHHhcCCCcEEEEech--hhHHHHH
Confidence            9888777787889998889999988887542    6789887743 3 234444433    3589999998  5789999


Q ss_pred             HHcCEEEeCCCCCCCCChHHHHHHHcCCcEEecC-CCCCcc---ceeeeCcceEEECC-CHHHHHHHHHHHHHcCcHHHH
Q 039338          380 NAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASR-FPSIKG---TIVVDDEFGFMFAP-NVESLHKTLEAAVSEGPMRLA  454 (493)
Q Consensus       380 ~~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~-~~~~~~---e~v~~~~~G~~~~~-d~~~l~~~i~~ll~~~~~~~~  454 (493)
                      +.||+++.     ++.|++++|||++|+|||+++ .+|...   +.+.+  .|..+.. |+++++++|.++++| ++.++
T Consensus       272 ~~aD~~v~-----~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~~--~G~~~~~~~~~~l~~~i~~ll~~-~~~~~  343 (380)
T PRK13609        272 RVTSCMIT-----KPGGITLSEAAALGVPVILYKPVPGQEKENAMYFER--KGAAVVIRDDEEVFAKTEALLQD-DMKLL  343 (380)
T ss_pred             HhccEEEe-----CCCchHHHHHHHhCCCEEECCCCCCcchHHHHHHHh--CCcEEEECCHHHHHHHHHHHHCC-HHHHH
Confidence            99999884     234789999999999999986 444321   12322  3444444 999999999999998 89999


Q ss_pred             HHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Q 039338          455 QRGEACRQYAASMFTANKMALAYERLFLCI  484 (493)
Q Consensus       455 ~~~~~~~~~~~~~fs~~~~~~~~~~~~~~i  484 (493)
                      +|++++++.... ++++++++.+.+++...
T Consensus       344 ~m~~~~~~~~~~-~s~~~i~~~i~~~~~~~  372 (380)
T PRK13609        344 QMKEAMKSLYLP-EPADHIVDDILAENHVE  372 (380)
T ss_pred             HHHHHHHHhCCC-chHHHHHHHHHHhhhhh
Confidence            999999887655 79999999999887653

>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed

Probab=99.95  E-value=4.9e-26  Score=227.31  Aligned_cols=334  Identities=17%  Similarity=0.116  Sum_probs=216.4

Q ss_pred             CCCchHHHHHHHHHHHHhCCCEEEE--EecCCCCCCCCCCccccCCCCCCCCCCceEeecCCCCccccccchHHHHHHhc
Q 039338           98 TPGGMERHAHTLHVALARRGHRVHI--FTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEADKWRYSKGWEQFDEENQ  175 (493)
Q Consensus        98 ~~gG~~~~~~~l~~~L~~~G~~V~v--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (493)
                      ...|-...+..|++.|.++++++.+  .+.....  ......  .   .... ..+.+.+..        ....+.+.++
T Consensus        58 ~s~Ge~~~~~~l~~~l~~~~~~~~i~~t~~t~~~--~~~~~~--~---~~~~-~~~~~~P~d--------~~~~~~~~l~  121 (425)
T PRK05749         58 VSVGETRAAIPLIRALRKRYPDLPILVTTMTPTG--SERAQA--L---FGDD-VEHRYLPYD--------LPGAVRRFLR  121 (425)
T ss_pred             CCHHHHHHHHHHHHHHHHhCCCCcEEEeCCCccH--HHHHHH--h---cCCC-ceEEEecCC--------cHHHHHHHHH
Confidence            3355778899999999998766444  3222222  111100  0   0111 112222211        1245666677


Q ss_pred             CCCCcEEEeCccc--h---hHHhhhccCcEEEEeccchhhhhhhhhhhhhhcCCCCccchHhHhHHHHHHHHHHHHHHhh
Q 039338          176 REPFDVVHSESVA--L---PHWLARNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQGVMLKVLNEIRFF  250 (493)
Q Consensus       176 ~~~~DiI~~~~~~--~---~~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (493)
                      +.+||+||++...  .   ......++| ++...|.......                      ..+..+.++  .+..+
T Consensus       122 ~~~Pd~v~~~~~~~~~~~l~~~~~~~ip-~vl~~~~~~~~s~----------------------~~~~~~~~~--~r~~~  176 (425)
T PRK05749        122 FWRPKLVIIMETELWPNLIAELKRRGIP-LVLANARLSERSF----------------------KRYQKFKRF--YRLLF  176 (425)
T ss_pred             hhCCCEEEEEecchhHHHHHHHHHCCCC-EEEEeccCChhhH----------------------HHHHHHHHH--HHHHH
Confidence            7899999987332  1   111223567 6655443321110                      000111111  22567


Q ss_pred             ccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCC-ccCCCccCCcccchhhhhhhCCCCCCcEEEEEecccccccChHHH
Q 039338          251 NKYAHHVAISDSCGEMLRDVYQIPSERVHVILNG-INENEYGVDLSLGQSFRSRIGIPKNASLVLGVAGRLVKDKGHPLL  329 (493)
Q Consensus       251 ~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ng-vd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Gr~~~~Kg~~~l  329 (493)
                      +.+|.++++|+..++.+.+ +|++.+ +.+++|+ +|.............++++++ + ++ .+++++|+.  .|+.+.+
T Consensus       177 ~~~d~ii~~S~~~~~~l~~-~g~~~~-i~vi~n~~~d~~~~~~~~~~~~~~r~~~~-~-~~-~vil~~~~~--~~~~~~l  249 (425)
T PRK05749        177 KNIDLVLAQSEEDAERFLA-LGAKNE-VTVTGNLKFDIEVPPELAARAATLRRQLA-P-NR-PVWIAASTH--EGEEELV  249 (425)
T ss_pred             HhCCEEEECCHHHHHHHHH-cCCCCC-cEecccccccCCCChhhHHHHHHHHHHhc-C-CC-cEEEEeCCC--chHHHHH
Confidence            7899999999999999987 687766 8899885 333221111122345666676 3 33 456677764  5789999


Q ss_pred             HHHHHHHHhhCCCeEEEEEeCCCcH-HHHhhh----c-C--------------cEEEecCCCHHHHHHHHHHcCEEEe-C
Q 039338          330 HEAFSKLMVKYPDVYLIVAGSGPWE-QRYKDF----G-H--------------QVLVMGSMSPAELRAFYNAIDIFVN-P  388 (493)
Q Consensus       330 l~a~~~l~~~~~~~~l~i~G~g~~~-~~~~~l----~-~--------------~V~~~g~~~~~~~~~~~~~adv~v~-p  388 (493)
                      ++|++++.+++|+++|+|+|+|+.+ +.++++    + .              +|.+.+.  .+++..+|+.||++++ +
T Consensus       250 l~A~~~l~~~~~~~~liivG~g~~r~~~l~~~~~~~gl~~~~~~~~~~~~~~~~v~l~~~--~~el~~~y~~aDi~~v~~  327 (425)
T PRK05749        250 LDAHRALLKQFPNLLLILVPRHPERFKEVEELLKKAGLSYVRRSQGEPPSADTDVLLGDT--MGELGLLYAIADIAFVGG  327 (425)
T ss_pred             HHHHHHHHHhCCCcEEEEcCCChhhHHHHHHHHHhCCCcEEEccCCCCCCCCCcEEEEec--HHHHHHHHHhCCEEEECC
Confidence            9999999888899999999998865 444433    2 2              2333333  3699999999999666 5


Q ss_pred             CCCCCCCChHHHHHHHcCCcEEecCC-CCCccceeeeC-cceEEECC-CHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHH
Q 039338          389 TLRPQGLDLTLMEAMMSGKPVMASRF-PSIKGTIVVDD-EFGFMFAP-NVESLHKTLEAAVSEGPMRLAQRGEACRQYAA  465 (493)
Q Consensus       389 s~~~eg~~~~~~EAm~~G~PvI~s~~-~~~~~e~v~~~-~~G~~~~~-d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~  465 (493)
                      |. .|++|.+++|||+||+|||+++. ++.. +++... .+|+++++ |+++|+++|.++++| ++.+++|++++++++.
T Consensus       328 S~-~e~~g~~~lEAma~G~PVI~g~~~~~~~-e~~~~~~~~g~~~~~~d~~~La~~l~~ll~~-~~~~~~m~~~a~~~~~  404 (425)
T PRK05749        328 SL-VKRGGHNPLEPAAFGVPVISGPHTFNFK-EIFERLLQAGAAIQVEDAEDLAKAVTYLLTD-PDARQAYGEAGVAFLK  404 (425)
T ss_pred             Cc-CCCCCCCHHHHHHhCCCEEECCCccCHH-HHHHHHHHCCCeEEECCHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHH
Confidence            64 48899999999999999999865 3444 544432 45777777 999999999999998 9999999999999998


Q ss_pred             HhcCHHHHHHHHHHHHHHHhhc
Q 039338          466 SMFTANKMALAYERLFLCIKNE  487 (493)
Q Consensus       466 ~~fs~~~~~~~~~~~~~~i~~~  487 (493)
                      ++   ...++++.+++.+.+++
T Consensus       405 ~~---~~~~~~~~~~l~~~l~~  423 (425)
T PRK05749        405 QN---QGALQRTLQLLEPYLPP  423 (425)
T ss_pred             hC---ccHHHHHHHHHHHhccc
Confidence            75   36667777777766554

>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis

Probab=99.95  E-value=3.2e-26  Score=223.30  Aligned_cols=316  Identities=20%  Similarity=0.185  Sum_probs=213.8

Q ss_pred             EEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCC----CCc
Q 039338           85 KIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGE----ADK  160 (493)
Q Consensus        85 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~  160 (493)
                      ||++.+.      ..||..+++..++++|.++||||++++.....  ..  ..      .......++.....    ...
T Consensus         1 ~~~~~~~------~~gG~~~~~~~la~~l~~~G~ev~v~~~~~~~--~~--~~------~~~~~~~~~~~~~~~~~~~~~   64 (350)
T cd03785           1 RILIAGG------GTGGHIFPALALAEELRERGAEVLFLGTKRGL--EA--RL------VPKAGIPLHTIPVGGLRRKGS   64 (350)
T ss_pred             CEEEEec------CchhhhhHHHHHHHHHHhCCCEEEEEECCCcc--hh--hc------ccccCCceEEEEecCcCCCCh
Confidence            3666664      66899999999999999999999999876433  11  11      01111112222111    011


Q ss_pred             -------cccccchHHHHHHhcCCCCcEEEeCccc--hhHH---hhhccCcEEEEeccchhhhhhhhhhhhhhcCCCCcc
Q 039338          161 -------WRYSKGWEQFDEENQREPFDVVHSESVA--LPHW---LARNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPM  228 (493)
Q Consensus       161 -------~~~~~~~~~~~~~~~~~~~DiI~~~~~~--~~~~---~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~  228 (493)
                             +........+.+.+++.+||+||+++..  +...   ...++| ++...|+.+.                   
T Consensus        65 ~~~~~~~~~~~~~~~~~~~~i~~~~pDvI~~~~~~~~~~~~~~a~~~~~p-~v~~~~~~~~-------------------  124 (350)
T cd03785          65 LKKLKAPFKLLKGVLQARKILKKFKPDVVVGFGGYVSGPVGLAAKLLGIP-LVIHEQNAVP-------------------  124 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCcchHHHHHHHHhCCC-EEEEcCCCCc-------------------
Confidence                   1112333456666778899999998642  2212   223446 5544333110                   


Q ss_pred             chHhHhHHHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCCCC
Q 039338          229 SLAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPK  308 (493)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~  308 (493)
                               ...     .+..++.+|.++++|+...+.      .+..++.+++||+|.+.+.+.+    . ++++++++
T Consensus       125 ---------~~~-----~~~~~~~~~~vi~~s~~~~~~------~~~~~~~~i~n~v~~~~~~~~~----~-~~~~~~~~  179 (350)
T cd03785         125 ---------GLA-----NRLLARFADRVALSFPETAKY------FPKDKAVVTGNPVREEILALDR----E-RARLGLRP  179 (350)
T ss_pred             ---------cHH-----HHHHHHhhCEEEEcchhhhhc------CCCCcEEEECCCCchHHhhhhh----h-HHhcCCCC
Confidence                     001     113345689999999988765      3567999999999987665422    1 67778877


Q ss_pred             CCcEEEEEecccccccChH-HHHHHHHHHHhhCCCeE-EEEEeCCCcHHHHhh----hcCcEEEecCCCHHHHHHHHHHc
Q 039338          309 NASLVLGVAGRLVKDKGHP-LLHEAFSKLMVKYPDVY-LIVAGSGPWEQRYKD----FGHQVLVMGSMSPAELRAFYNAI  382 (493)
Q Consensus       309 ~~~~~i~~~Gr~~~~Kg~~-~ll~a~~~l~~~~~~~~-l~i~G~g~~~~~~~~----l~~~V~~~g~~~~~~~~~~~~~a  382 (493)
                      ++ .++++.|+....|+.. .++++++.+.+  ++++ ++++|+| ..+.+++    +.++|.+.|++  +++.++|+.|
T Consensus       180 ~~-~~i~~~~g~~~~~~~~~~l~~a~~~l~~--~~~~~~~i~G~g-~~~~l~~~~~~~~~~v~~~g~~--~~~~~~l~~a  253 (350)
T cd03785         180 GK-PTLLVFGGSQGARAINEAVPEALAELLR--KRLQVIHQTGKG-DLEEVKKAYEELGVNYEVFPFI--DDMAAAYAAA  253 (350)
T ss_pred             CC-eEEEEECCcHhHHHHHHHHHHHHHHhhc--cCeEEEEEcCCc-cHHHHHHHHhccCCCeEEeehh--hhHHHHHHhc
Confidence            76 4555666655566665 45588888863  3566 4577887 3344433    23689999998  7999999999


Q ss_pred             CEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCC--------ccceeeeCcceEEECC---CHHHHHHHHHHHHHcCcH
Q 039338          383 DIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSI--------KGTIVVDDEFGFMFAP---NVESLHKTLEAAVSEGPM  451 (493)
Q Consensus       383 dv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~--------~~e~v~~~~~G~~~~~---d~~~l~~~i~~ll~~~~~  451 (493)
                      |++|.++    | +++++|||++|+|||+++.++.        . +.+.+.++|+++++   |+++++++|.+++++ ++
T Consensus       254 d~~v~~s----g-~~t~~Eam~~G~Pvv~~~~~~~~~~~~~~~~-~~l~~~g~g~~v~~~~~~~~~l~~~i~~ll~~-~~  326 (350)
T cd03785         254 DLVISRA----G-ASTVAELAALGLPAILIPLPYAADDHQTANA-RALVKAGAAVLIPQEELTPERLAAALLELLSD-PE  326 (350)
T ss_pred             CEEEECC----C-HhHHHHHHHhCCCEEEeecCCCCCCcHHHhH-HHHHhCCCEEEEecCCCCHHHHHHHHHHHhcC-HH
Confidence            9999755    2 5799999999999999876541        2 45666789999985   799999999999988 89


Q ss_pred             HHHHHHHHHHHHHHHhcCHHHHHH
Q 039338          452 RLAQRGEACRQYAASMFTANKMAL  475 (493)
Q Consensus       452 ~~~~~~~~~~~~~~~~fs~~~~~~  475 (493)
                      .+++|+++++++++. +..+++++
T Consensus       327 ~~~~~~~~~~~~~~~-~~~~~i~~  349 (350)
T cd03785         327 RLKAMAEAARSLARP-DAAERIAD  349 (350)
T ss_pred             HHHHHHHHHHhcCCC-CHHHHHHh
Confidence            999999999988764 66666654

It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.

>PRK13608 diacylglycerol glucosyltransferase; Provisional

Probab=99.95  E-value=4.3e-26  Score=224.07  Aligned_cols=347  Identities=12%  Similarity=0.076  Sum_probs=231.0

Q ss_pred             CceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCC---CEEEEEecCCCCCCCCCCcccc--CCCCCCCCCCceE-eec
Q 039338           82 FTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRG---HRVHIFTSPVDNINSPSISHQE--NDDGSNNKYPLLH-FHE  155 (493)
Q Consensus        82 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G---~~V~v~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~~~  155 (493)
                      +-|||||++..     ..+|+...+..|.++|.+.|   .+|.++-.-...  .+.....-  .+.......+.++ ...
T Consensus         4 ~~~~vlil~~~-----~G~GH~~aA~al~~~~~~~~~~~~~~~~~D~~~~~--~~~~~~~~~~~Y~~~~~~~p~~y~~~y   76 (391)
T PRK13608          4 QNKKILIITGS-----FGNGHMQVTQSIVNQLNDMNLDHLSVIEHDLFMEA--HPILTSICKKWYINSFKYFRNMYKGFY   76 (391)
T ss_pred             CCceEEEEECC-----CCchHHHHHHHHHHHHHhhCCCCceEEEeehHHhc--CchHHHHHHHHHHHHHHHhHHHHHHHH
Confidence            34789999975     45799999999999999875   456655332211  11111100  0000000001100 000


Q ss_pred             -CCCCc----cccccchHHHHHHhcCCCCcEEEeCccchhHHhh-----hccCcEEEEeccchhhhhhhhhhhhhhcCCC
Q 039338          156 -GEADK----WRYSKGWEQFDEENQREPFDVVHSESVALPHWLA-----RNVTNLAVSWHGIALESLQSGIFQDLTRKPL  225 (493)
Q Consensus       156 -~~~~~----~~~~~~~~~~~~~~~~~~~DiI~~~~~~~~~~~~-----~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~  225 (493)
                       .....    +........+.+.+++.+||+|+++.+.......     .++| ++...++...   +            
T Consensus        77 ~~~~~~~~~~~~~~~~~~~l~~~l~~~kPDvVi~~~p~~~~~~l~~~~~~~iP-~~~v~td~~~---~------------  140 (391)
T PRK13608         77 YSRPDKLDKCFYKYYGLNKLINLLIKEKPDLILLTFPTPVMSVLTEQFNINIP-VATVMTDYRL---H------------  140 (391)
T ss_pred             HcCchhhHHHHHHHHHHHHHHHHHHHhCcCEEEECCcHHHHHHHHHhcCCCCC-EEEEeCCCCc---c------------
Confidence             00000    0011123466777788999999997654322211     1446 5444443210   0            


Q ss_pred             CccchHhHhHHHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhC
Q 039338          226 EPMSLAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIG  305 (493)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~  305 (493)
                                          ..++.+.+|.+++.|+.+++.+.+ .|++.+++.+++++++......  ......++++|
T Consensus       141 --------------------~~w~~~~~d~~~v~s~~~~~~l~~-~gi~~~ki~v~GiPv~~~f~~~--~~~~~~~~~~~  197 (391)
T PRK13608        141 --------------------KNWITPYSTRYYVATKETKQDFID-VGIDPSTVKVTGIPIDNKFETP--IDQKQWLIDNN  197 (391)
T ss_pred             --------------------cccccCCCCEEEECCHHHHHHHHH-cCCCHHHEEEECeecChHhccc--ccHHHHHHHcC
Confidence                                013457899999999999999987 5888899999988887544322  22346778899


Q ss_pred             CCCCCcEEEEEecccccccChHHHHHHHHHHHhhCCCeEEEEE-eCCC-cHHHHhh-h--cCcEEEecCCCHHHHHHHHH
Q 039338          306 IPKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVA-GSGP-WEQRYKD-F--GHQVLVMGSMSPAELRAFYN  380 (493)
Q Consensus       306 i~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~-G~g~-~~~~~~~-l--~~~V~~~g~~~~~~~~~~~~  380 (493)
                      ++++++.++++.|+++..||++.+++++.   +..++++++++ |.+. ..+.+++ +  .++|.++|++  +++.++|+
T Consensus       198 l~~~~~~ilv~~G~lg~~k~~~~li~~~~---~~~~~~~~vvv~G~~~~l~~~l~~~~~~~~~v~~~G~~--~~~~~~~~  272 (391)
T PRK13608        198 LDPDKQTILMSAGAFGVSKGFDTMITDIL---AKSANAQVVMICGKSKELKRSLTAKFKSNENVLILGYT--KHMNEWMA  272 (391)
T ss_pred             CCCCCCEEEEECCCcccchhHHHHHHHHH---hcCCCceEEEEcCCCHHHHHHHHHHhccCCCeEEEecc--chHHHHHH
Confidence            98887777888999998899999999853   23367888665 5442 2233333 2  3689999998  68999999


Q ss_pred             HcCEEEeCCCCCCCCChHHHHHHHcCCcEEecCC-CCCcc---ceeeeCcceEEECCCHHHHHHHHHHHHHcCcHHHHHH
Q 039338          381 AIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRF-PSIKG---TIVVDDEFGFMFAPNVESLHKTLEAAVSEGPMRLAQR  456 (493)
Q Consensus       381 ~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~-~~~~~---e~v~~~~~G~~~~~d~~~l~~~i~~ll~~~~~~~~~~  456 (493)
                      +||++|..     +.|+++.|||++|+|+|+++. ++..+   .++.+.+.|+... |+++++++|.++++| ++.+++|
T Consensus       273 ~aDl~I~k-----~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~~G~g~~~~-~~~~l~~~i~~ll~~-~~~~~~m  345 (391)
T PRK13608        273 SSQLMITK-----PGGITISEGLARCIPMIFLNPAPGQELENALYFEEKGFGKIAD-TPEEAIKIVASLTNG-NEQLTNM  345 (391)
T ss_pred             hhhEEEeC-----CchHHHHHHHHhCCCEEECCCCCCcchhHHHHHHhCCcEEEeC-CHHHHHHHHHHHhcC-HHHHHHH
Confidence            99999962     347899999999999999963 33110   1334556676654 999999999999998 8999999


Q ss_pred             HHHHHHHHHHhcCHHHHHHHHHHHHHHHhhc
Q 039338          457 GEACRQYAASMFTANKMALAYERLFLCIKNE  487 (493)
Q Consensus       457 ~~~~~~~~~~~fs~~~~~~~~~~~~~~i~~~  487 (493)
                      ++++++..+. ++++.+++.+.+++..+.+.
T Consensus       346 ~~~~~~~~~~-~s~~~i~~~l~~l~~~~~~~  375 (391)
T PRK13608        346 ISTMEQDKIK-YATQTICRDLLDLIGHSSQP  375 (391)
T ss_pred             HHHHHHhcCC-CCHHHHHHHHHHHhhhhhhh
Confidence            9999998766 89999999999998875443

>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor

Probab=99.95  E-value=2.4e-26  Score=229.30  Aligned_cols=273  Identities=19%  Similarity=0.210  Sum_probs=195.0

Q ss_pred             CCcEEEeCccc---hhHHhhhccC--cEEEEeccchhhhhhhhhhhhhhcCCCCccchHhHhHHHHHHHHHHHHHHhhcc
Q 039338          178 PFDVVHSESVA---LPHWLARNVT--NLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQGVMLKVLNEIRFFNK  252 (493)
Q Consensus       178 ~~DiI~~~~~~---~~~~~~~~~p--~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (493)
                      ..|+|++|++.   ++..+.+..|  ++++.+|-.++..   +++..+.              ....+.      +.+-.
T Consensus       131 ~~d~iwihDyhl~llp~~lr~~~~~~~i~~f~HipfP~~---e~~~~lp--------------~~~~ll------~~~l~  187 (460)
T cd03788         131 PGDLVWVHDYHLLLLPQMLRERGPDARIGFFLHIPFPSS---EIFRCLP--------------WREELL------RGLLG  187 (460)
T ss_pred             CCCEEEEeChhhhHHHHHHHhhCCCCeEEEEEeCCCCCh---HHHhhCC--------------ChHHHH------HHHhc
Confidence            57999999873   3344443322  3888888654322   2221110              001111      22345


Q ss_pred             CCeEEEcChhHHHHHHHH----hC------------CCCCcEEEecCCccCCCccCCccc---chhhhhhhCCCCCCcEE
Q 039338          253 YAHHVAISDSCGEMLRDV----YQ------------IPSERVHVILNGINENEYGVDLSL---GQSFRSRIGIPKNASLV  313 (493)
Q Consensus       253 ~d~ii~~S~~~~~~~~~~----~~------------~~~~~v~vi~ngvd~~~~~~~~~~---~~~~r~~~~i~~~~~~~  313 (493)
                      +|.+.+.+......+.+.    .+            -...++.++|||||.+.|.+....   ....++..+...++ .+
T Consensus       188 ~D~igF~t~~~~~~Fl~~~~~~l~~~~~~~~~i~~~g~~~~i~vip~GID~~~f~~~~~~~~~~~~~~~~~~~~~~~-~~  266 (460)
T cd03788         188 ADLIGFQTERYARNFLSCCSRLLGLEVTDDGGVEYGGRRVRVGAFPIGIDPDAFRKLAASPEVQERAAELRERLGGR-KL  266 (460)
T ss_pred             CCEEEECCHHHHHHHHHHHHHHcCCcccCCceEEECCEEEEEEEEeCeEcHHHHHHHhcCchhHHHHHHHHHhcCCC-EE
Confidence            888888886555444331    11            123468999999999988754322   12233334555555 67


Q ss_pred             EEEecccccccChHHHHHHHHHHHhhCCC----eEEEEEeCC-----CcH----HHHhhh--------c----CcEE-Ee
Q 039338          314 LGVAGRLVKDKGHPLLHEAFSKLMVKYPD----VYLIVAGSG-----PWE----QRYKDF--------G----HQVL-VM  367 (493)
Q Consensus       314 i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~----~~l~i~G~g-----~~~----~~~~~l--------~----~~V~-~~  367 (493)
                      |+++||+.+.||++.+++|+..+.+++|+    ++|+++|.+     +..    +.++++        +    ..|. +.
T Consensus       267 il~vgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vg~~~~g~~~~~~~l~~~l~~~v~~in~~~g~~~~~~v~~~~  346 (460)
T cd03788         267 IVGVDRLDYSKGIPERLLAFERLLERYPEWRGKVVLVQIAVPSRTDVPEYQELRREVEELVGRINGKFGTLDWTPVRYLY  346 (460)
T ss_pred             EEEecCccccCCHHHHHHHHHHHHHhChhhcCCEEEEEEccCCCcCcHHHHHHHHHHHHHHHHHHhccCCCCceeEEEEe
Confidence            88999999999999999999999888775    678888643     222    222222        1    1344 45


Q ss_pred             cCCCHHHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcCCc----EEecCCCCCccceeeeCcceEEECC-CHHHHHHHH
Q 039338          368 GSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKP----VMASRFPSIKGTIVVDDEFGFMFAP-NVESLHKTL  442 (493)
Q Consensus       368 g~~~~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G~P----vI~s~~~~~~~e~v~~~~~G~~~~~-d~~~l~~~i  442 (493)
                      |.++.+++.++|+.||++|+||.+ ||+|++++|||+||+|    ||+|+.+|.. +.   +.+|+++++ |+++++++|
T Consensus       347 g~v~~~el~~~y~~aDv~v~pS~~-Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~-~~---~~~g~lv~p~d~~~la~ai  421 (460)
T cd03788         347 RSLPREELAALYRAADVALVTPLR-DGMNLVAKEYVACQDDDPGVLILSEFAGAA-EE---LSGALLVNPYDIDEVADAI  421 (460)
T ss_pred             CCCCHHHHHHHHHhccEEEeCccc-cccCcccceeEEEecCCCceEEEeccccch-hh---cCCCEEECCCCHHHHHHHH
Confidence            788999999999999999999976 9999999999999999    9999988877 33   568999999 999999999


Q ss_pred             HHHHHcCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Q 039338          443 EAAVSEGPMRLAQRGEACRQYAASMFTANKMALAYERL  480 (493)
Q Consensus       443 ~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~  480 (493)
                      .+++++++++++.+++++++.+.+ ||++..++++.+-
T Consensus       422 ~~~l~~~~~e~~~~~~~~~~~v~~-~~~~~w~~~~l~~  458 (460)
T cd03788         422 HRALTMPLEERRERHRKLREYVRT-HDVQAWANSFLDD  458 (460)
T ss_pred             HHHHcCCHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHh
Confidence            999998678889999999999866 9999999988753

It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.

>PLN02605 monogalactosyldiacylglycerol synthase

Probab=99.95  E-value=5.1e-26  Score=223.34  Aligned_cols=339  Identities=13%  Similarity=0.133  Sum_probs=225.5

Q ss_pred             EEEEeccCCCCCCCCchHHHHHHHHHHHHhC-C--CEEEEEecCCCCCCCCCCcc--ccCCCCCCCCCCceE-eec--CC
Q 039338           86 IAVFSRKWPISTTPGGMERHAHTLHVALARR-G--HRVHIFTSPVDNINSPSISH--QENDDGSNNKYPLLH-FHE--GE  157 (493)
Q Consensus        86 Il~v~~~~p~~~~~gG~~~~~~~l~~~L~~~-G--~~V~v~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~--~~  157 (493)
                      |||++..     ..||+...+..|.++|.++ |  .+|.++-.-...  .+....  ...+...... +.++ ...  ..
T Consensus         1 ilils~~-----~G~GH~~aa~al~~~~~~~~~~~~~v~~~d~~~~~--~~~~~~~~~~~Y~~~~~~-p~~~~~~y~~~~   72 (382)
T PLN02605          1 VLILMSD-----TGGGHRASAEAIKDAFQLEFGDEYQVFIVDLWKEH--TPWPFNQLPRSYKFLVKH-PQLWKMTYHGTN   72 (382)
T ss_pred             CEEEEEc-----CCcChHHHHHHHHHHHHhhcCCCeeEEEEehhhhc--CcchhhhHHHHHHHHhhC-HHHHHHHHHhcC
Confidence            5788874     5578999999999999864 4  456565433222  111100  0000000000 1000 000  00


Q ss_pred             CCcc-c------cccchHHHHHHhcCCCCcEEEeCccc---hhHH-hh-------hccCcEEEEeccchhhhhhhhhhhh
Q 039338          158 ADKW-R------YSKGWEQFDEENQREPFDVVHSESVA---LPHW-LA-------RNVTNLAVSWHGIALESLQSGIFQD  219 (493)
Q Consensus       158 ~~~~-~------~~~~~~~~~~~~~~~~~DiI~~~~~~---~~~~-~~-------~~~p~~v~~~h~~~~~~~~~~~~~~  219 (493)
                      .... .      .......+.+.+++.+||+||++.+.   .+.+ +.       ..+| ++..++|+...  +      
T Consensus        73 ~~~~~~~~~~~~~~~~~~~l~~~i~~~~pDvIi~thp~~~~~~~~~l~~~~~~~~~~~p-~~~~~tD~~~~--~------  143 (382)
T PLN02605         73 PRLIHQSYFAATSAFVAREVAKGLMKYKPDIIVSVHPLMQHVPLRVLRWQGKELGKKIP-FTTVVTDLGTC--H------  143 (382)
T ss_pred             chhhhHHHHHHHHHHHHHHHHHHHHhcCcCEEEEeCcCcccCHHHHHHHHhhccCCCCC-EEEEECCCCCc--C------
Confidence            0000 0      01112456677788899999996543   1211 11       1345 66666654210  0      


Q ss_pred             hhcCCCCccchHhHhHHHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchh
Q 039338          220 LTRKPLEPMSLAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQS  299 (493)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~  299 (493)
                                                ..++.+.+|.++++|+.+++.+.+ +|++.+++.+++++++.+.+.+. ..+..
T Consensus       144 --------------------------~~w~~~~~d~~~~~s~~~~~~l~~-~g~~~~ki~v~g~~v~~~f~~~~-~~~~~  195 (382)
T PLN02605        144 --------------------------PTWFHKGVTRCFCPSEEVAKRALK-RGLEPSQIRVYGLPIRPSFARAV-RPKDE  195 (382)
T ss_pred             --------------------------cccccCCCCEEEECCHHHHHHHHH-cCCCHHHEEEECcccCHhhccCC-CCHHH
Confidence                                      014567899999999999999887 58998999999999987654332 34567


Q ss_pred             hhhhhCCCCCCcEEEEEecccccccChHHHHHHHHHHHh----hCCCeE-EEEEeCCC-cHHHHhhh--cCcEEEecCCC
Q 039338          300 FRSRIGIPKNASLVLGVAGRLVKDKGHPLLHEAFSKLMV----KYPDVY-LIVAGSGP-WEQRYKDF--GHQVLVMGSMS  371 (493)
Q Consensus       300 ~r~~~~i~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~l~~----~~~~~~-l~i~G~g~-~~~~~~~l--~~~V~~~g~~~  371 (493)
                      +|+++|++++. .+|+++|+....|++..+++++..+..    ..++.+ ++++|+++ ..+.+++.  ..+|.++|++ 
T Consensus       196 ~r~~~gl~~~~-~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~~~~vi~G~~~~~~~~L~~~~~~~~v~~~G~~-  273 (382)
T PLN02605        196 LRRELGMDEDL-PAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIGQVVVICGRNKKLQSKLESRDWKIPVKVRGFV-  273 (382)
T ss_pred             HHHHcCCCCCC-cEEEEECCCcccccHHHHHHHHHHhhccccccCCCceEEEEECCCHHHHHHHHhhcccCCeEEEecc-
Confidence            89999998877 667799998889999999999876531    124565 66778764 34455544  2579999999 


Q ss_pred             HHHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcCCcEEecCC------CCCccceeeeCcceEEECCCHHHHHHHHHHH
Q 039338          372 PAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRF------PSIKGTIVVDDEFGFMFAPNVESLHKTLEAA  445 (493)
Q Consensus       372 ~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~------~~~~~e~v~~~~~G~~~~~d~~~l~~~i~~l  445 (493)
                       +++.++|++||++|.++     .|++++|||+||+|+|+++.      ++.  +.+.+++.|+.. .|+++++++|.++
T Consensus       274 -~~~~~l~~aaDv~V~~~-----g~~ti~EAma~g~PvI~~~~~pgqe~gn~--~~i~~~g~g~~~-~~~~~la~~i~~l  344 (382)
T PLN02605        274 -TNMEEWMGACDCIITKA-----GPGTIAEALIRGLPIILNGYIPGQEEGNV--PYVVDNGFGAFS-ESPKEIARIVAEW  344 (382)
T ss_pred             -ccHHHHHHhCCEEEECC-----CcchHHHHHHcCCCEEEecCCCccchhhH--HHHHhCCceeec-CCHHHHHHHHHHH
Confidence             48999999999999754     26799999999999999984      222  234556677765 3999999999999


Q ss_pred             HHcCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 039338          446 VSEGPMRLAQRGEACRQYAASMFTANKMALAYERLF  481 (493)
Q Consensus       446 l~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~  481 (493)
                      +.++++.+++|++++++.... .+.+.+++.+.++.
T Consensus       345 l~~~~~~~~~m~~~~~~~~~~-~a~~~i~~~l~~~~  379 (382)
T PLN02605        345 FGDKSDELEAMSENALKLARP-EAVFDIVHDLHELV  379 (382)
T ss_pred             HcCCHHHHHHHHHHHHHhcCC-chHHHHHHHHHHHh
Confidence            987577889999999998766 57788877776543

>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds

Probab=99.95  E-value=6.6e-25  Score=214.93  Aligned_cols=219  Identities=18%  Similarity=0.166  Sum_probs=159.9

Q ss_pred             HHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCCCCCCcEEEEEecccccccC
Q 039338          246 EIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVAGRLVKDKG  325 (493)
Q Consensus       246 ~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Gr~~~~Kg  325 (493)
                      +..+++++|.++++|+.+.+.+.+ ++   .++++|+||+|.+.|.+........+..   ...++++++|+|++.+.++
T Consensus       147 e~~~~~~ad~vi~~S~~l~~~~~~-~~---~~i~~i~ngvd~~~f~~~~~~~~~~~~~---~~~~~~~i~y~G~l~~~~d  219 (373)
T cd04950         147 ERRLLKRADLVFTTSPSLYEAKRR-LN---PNVVLVPNGVDYEHFAAARDPPPPPADL---AALPRPVIGYYGAIAEWLD  219 (373)
T ss_pred             HHHHHHhCCEEEECCHHHHHHHhh-CC---CCEEEcccccCHHHhhcccccCCChhHH---hcCCCCEEEEEeccccccC
Confidence            457789999999999999998877 33   6899999999998886543221111111   1223378999999998777


Q ss_pred             hHHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhhh--cCcEEEecCCCHHHHHHHHHHcCEEEeCCCC----CCCCChHH
Q 039338          326 HPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDF--GHQVLVMGSMSPAELRAFYNAIDIFVNPTLR----PQGLDLTL  399 (493)
Q Consensus       326 ~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~l--~~~V~~~g~~~~~~~~~~~~~adv~v~ps~~----~eg~~~~~  399 (493)
                      ++.+.++.+    ..|+++|+++|.++......++  .+||+++|+++++++..+|+.+|++++|+..    .+++|+++
T Consensus       220 ~~ll~~la~----~~p~~~~vliG~~~~~~~~~~~~~~~nV~~~G~~~~~~l~~~l~~~Dv~l~P~~~~~~~~~~~P~Kl  295 (373)
T cd04950         220 LELLEALAK----ARPDWSFVLIGPVDVSIDPSALLRLPNVHYLGPKPYKELPAYLAGFDVAILPFRLNELTRATSPLKL  295 (373)
T ss_pred             HHHHHHHHH----HCCCCEEEEECCCcCccChhHhccCCCEEEeCCCCHHHHHHHHHhCCEEecCCccchhhhcCCcchH
Confidence            765554443    3489999999987322222333  2899999999999999999999999999852    24689999


Q ss_pred             HHHHHcCCcEEecCCCCCccceeeeCcceEEECCCHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Q 039338          400 MEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAPNVESLHKTLEAAVSEGPMRLAQRGEACRQYAASMFTANKMALAYER  479 (493)
Q Consensus       400 ~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~  479 (493)
                      +|||+||+|||+++.+..    +...+.+++.+.|+++++++|.+++.++.....+   +.++ ..+.+||++.++++.+
T Consensus       296 ~EylA~G~PVVat~~~~~----~~~~~~~~~~~~d~~~~~~ai~~~l~~~~~~~~~---~~~~-~~~~~sW~~~a~~~~~  367 (373)
T cd04950         296 FEYLAAGKPVVATPLPEV----RRYEDEVVLIADDPEEFVAAIEKALLEDGPARER---RRLR-LAAQNSWDARAAEMLE  367 (373)
T ss_pred             HHHhccCCCEEecCcHHH----HhhcCcEEEeCCCHHHHHHHHHHHHhcCCchHHH---HHHH-HHHHCCHHHHHHHHHH
Confidence            999999999999986544    3334445555449999999999987663332222   2222 4445999999999997


Q ss_pred             HHHH
Q 039338          480 LFLC  483 (493)
Q Consensus       480 ~~~~  483 (493)
                      .+.+
T Consensus       368 ~l~~  371 (373)
T cd04950         368 ALQE  371 (373)
T ss_pred             HHHh
Confidence            6654

The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center

>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase

Probab=99.95  E-value=1.6e-25  Score=218.08  Aligned_cols=316  Identities=17%  Similarity=0.143  Sum_probs=203.1

Q ss_pred             eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCC----C
Q 039338           84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEA----D  159 (493)
Q Consensus        84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~  159 (493)
                      |||++++.      ..||.......|+++|.++||||++++.....  ..  ..      .......++......    +
T Consensus         1 ~~i~~~~g------~~~g~~~~~~~La~~L~~~g~eV~vv~~~~~~--~~--~~------~~~~g~~~~~i~~~~~~~~~   64 (348)
T TIGR01133         1 KKVVLAAG------GTGGHIFPALAVAEELIKRGVEVLWLGTKRGL--EK--RL------VPKAGIEFYFIPVGGLRRKG   64 (348)
T ss_pred             CeEEEEeC------ccHHHHhHHHHHHHHHHhCCCEEEEEeCCCcc--hh--cc------cccCCCceEEEeccCcCCCC
Confidence            78998886      45677777789999999999999999863322  10  11      011112222221111    1


Q ss_pred             c-------cccccchHHHHHHhcCCCCcEEEeCccc--hhHHh-h--hccCcEEEEeccchhhhhhhhhhhhhhcCCCCc
Q 039338          160 K-------WRYSKGWEQFDEENQREPFDVVHSESVA--LPHWL-A--RNVTNLAVSWHGIALESLQSGIFQDLTRKPLEP  227 (493)
Q Consensus       160 ~-------~~~~~~~~~~~~~~~~~~~DiI~~~~~~--~~~~~-~--~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~  227 (493)
                      .       +........+.+.+++.+||+||+++..  +...+ +  .++| ++...++...                  
T Consensus        65 ~~~~l~~~~~~~~~~~~l~~~i~~~~pDvVi~~~~~~~~~~~~~~~~~~~p-~v~~~~~~~~------------------  125 (348)
T TIGR01133        65 SFRLIKTPLKLLKAVFQARRILKKFKPDAVIGFGGYVSGPAGLAAKLLGIP-LFHHEQNAVP------------------  125 (348)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEcCCcccHHHHHHHHHcCCC-EEEECCCCCc------------------
Confidence            0       1122334456677788999999998642  22221 2  2345 5432222100                  


Q ss_pred             cchHhHhHHHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCCC
Q 039338          228 MSLAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIP  307 (493)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~  307 (493)
                                ...     ++.+++.+|.++++|+.+.+.+         +..+++||++...+.+..     .+++++++
T Consensus       126 ----------~~~-----~~~~~~~~d~ii~~~~~~~~~~---------~~~~i~n~v~~~~~~~~~-----~~~~~~~~  176 (348)
T TIGR01133       126 ----------GLT-----NKLLSRFAKKVLISFPGAKDHF---------EAVLVGNPVRQEIRSLPV-----PRERFGLR  176 (348)
T ss_pred             ----------cHH-----HHHHHHHhCeeEECchhHhhcC---------CceEEcCCcCHHHhcccc-----hhhhcCCC
Confidence                      001     1244567899999999876654         237999999876554321     13356777


Q ss_pred             CCCcEEEEEecccccccChHH-HHHHHHHHHhhCCCeEEE-EEeCCCcHHHHhhhc--Cc-EEEecCCCHHHHHHHHHHc
Q 039338          308 KNASLVLGVAGRLVKDKGHPL-LHEAFSKLMVKYPDVYLI-VAGSGPWEQRYKDFG--HQ-VLVMGSMSPAELRAFYNAI  382 (493)
Q Consensus       308 ~~~~~~i~~~Gr~~~~Kg~~~-ll~a~~~l~~~~~~~~l~-i~G~g~~~~~~~~l~--~~-V~~~g~~~~~~~~~~~~~a  382 (493)
                      ++. ++++++|+....|++.. +++++..+.+.  +++++ ++|++.. +.+++..  .+ .....+.. .++.++|+.|
T Consensus       177 ~~~-~~i~~~gg~~~~~~~~~~l~~a~~~l~~~--~~~~~~~~g~~~~-~~l~~~~~~~~l~~~v~~~~-~~~~~~l~~a  251 (348)
T TIGR01133       177 EGK-PTILVLGGSQGAKILNELVPKALAKLAEK--GIQIVHQTGKNDL-EKVKNVYQELGIEAIVTFID-ENMAAAYAAA  251 (348)
T ss_pred             CCC-eEEEEECCchhHHHHHHHHHHHHHHHhhc--CcEEEEECCcchH-HHHHHHHhhCCceEEecCcc-cCHHHHHHhC
Confidence            655 67788988777788654 55888888653  45554 4454433 4443321  11 12222333 3899999999


Q ss_pred             CEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCcc------ceeeeCcceEEECC-C--HHHHHHHHHHHHHcCcHHH
Q 039338          383 DIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKG------TIVVDDEFGFMFAP-N--VESLHKTLEAAVSEGPMRL  453 (493)
Q Consensus       383 dv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~------e~v~~~~~G~~~~~-d--~~~l~~~i~~ll~~~~~~~  453 (493)
                      |++|.++    | +++++|||++|+|+|+++.++..+      +++.++++|+++++ |  +++++++|.++++| ++.+
T Consensus       252 d~~v~~~----g-~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ll~~-~~~~  325 (348)
T TIGR01133       252 DLVISRA----G-ASTVAELAAAGVPAILIPYPYAADDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLKLLLD-PANL  325 (348)
T ss_pred             CEEEECC----C-hhHHHHHHHcCCCEEEeeCCCCccchhhHHHHHHHCCCEEEEecccCCHHHHHHHHHHHHcC-HHHH
Confidence            9999754    3 689999999999999998755321      46778899999987 5  99999999999988 8999


Q ss_pred             HHHHHHHHHHHHHhcCHHHHHH
Q 039338          454 AQRGEACRQYAASMFTANKMAL  475 (493)
Q Consensus       454 ~~~~~~~~~~~~~~fs~~~~~~  475 (493)
                      ++|++++++++.+ ...+++++
T Consensus       326 ~~~~~~~~~~~~~-~~~~~i~~  346 (348)
T TIGR01133       326 EAMAEAARKLAKP-DAAKRIAE  346 (348)
T ss_pred             HHHHHHHHhcCCc-cHHHHHHh
Confidence            9999999887755 45555544

RL J Bacteriol 1993 Mar;175(6):1841-3

>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]

Probab=99.94  E-value=2.6e-25  Score=219.80  Aligned_cols=271  Identities=18%  Similarity=0.200  Sum_probs=198.3

Q ss_pred             CCcEEEeCccc---hhHHhhhccC--cEEEEeccchhhhhhhhhhhhhhcCCCCccchHhHhHHHHHHHHHHHHHHhhcc
Q 039338          178 PFDVVHSESVA---LPHWLARNVT--NLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQGVMLKVLNEIRFFNK  252 (493)
Q Consensus       178 ~~DiI~~~~~~---~~~~~~~~~p--~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (493)
                      .-|+|.+|++.   ++.++....|  ++...+|-+++.   ++++..+.             .....       .+-+-.
T Consensus       127 ~~d~vwvhDYhl~l~p~~lr~~~~~~~igfFlHipfP~---~e~f~~lp-------------~r~~i-------l~gll~  183 (456)
T TIGR02400       127 PGDIVWVHDYHLMLLPAMLRELGVQNKIGFFLHIPFPS---SEIYRTLP-------------WRREL-------LEGLLA  183 (456)
T ss_pred             CCCEEEEecchhhHHHHHHHhhCCCCeEEEEEeCCCCC---hHHHhhCC-------------cHHHH-------HHHHhc
Confidence            34899999874   4445554443  377788865432   22332221             11111       133557


Q ss_pred             CCeEEEcChhHHHHHHHH----hCC-----------CCCcEEEecCCccCCCccCCccc------chhhhhhhCCCCCCc
Q 039338          253 YAHHVAISDSCGEMLRDV----YQI-----------PSERVHVILNGINENEYGVDLSL------GQSFRSRIGIPKNAS  311 (493)
Q Consensus       253 ~d~ii~~S~~~~~~~~~~----~~~-----------~~~~v~vi~ngvd~~~~~~~~~~------~~~~r~~~~i~~~~~  311 (493)
                      +|.|-+.+....+.+...    +|.           ...++.++|||+|.+.|.+....      ...+|++++   ++ 
T Consensus       184 ~dligF~t~~~~~~Fl~~~~~~l~~~~~~~~~~~~g~~~~v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~---~~-  259 (456)
T TIGR02400       184 YDLVGFQTYDDARNFLSAVSRELGLETLPNGVESGGRTVRVGAFPIGIDVDRFAEQAKKPSVQKRIAELRESLK---GR-  259 (456)
T ss_pred             CCEEEECCHHHHHHHHHHHHHHhCCcccCCceEECCcEEEEEEecCcCCHHHHHHHhcChhHHHHHHHHHHHcC---CC-
Confidence            899999998887766542    221           34568899999999988654322      123455552   33 


Q ss_pred             EEEEEecccccccChHHHHHHHHHHHhhCCC----eEEEEEe-----CCCcHH----HHhhh--------c-----CcEE
Q 039338          312 LVLGVAGRLVKDKGHPLLHEAFSKLMVKYPD----VYLIVAG-----SGPWEQ----RYKDF--------G-----HQVL  365 (493)
Q Consensus       312 ~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~----~~l~i~G-----~g~~~~----~~~~l--------~-----~~V~  365 (493)
                      .+|+++||+++.||++.+++|++++.+++|+    +.|+++|     +++..+    .++++        +     +-+.
T Consensus       260 ~vIl~VgRLd~~KGi~~ll~A~~~ll~~~p~~~~~v~Lv~v~~p~rg~~~~~~~l~~~i~~lv~~in~~~~~~~~~pv~~  339 (456)
T TIGR02400       260 KLIIGVDRLDYSKGLPERLLAFERFLEEHPEWRGKVVLVQIAVPSRGDVPEYQQLRRQVEELVGRINGRFGTLDWTPIRY  339 (456)
T ss_pred             eEEEEccccccccCHHHHHHHHHHHHHhCccccCceEEEEEecCCccCchHHHHHHHHHHHHHHHHHhccCCCCCccEEE
Confidence            6788999999999999999999999888775    5577775     333322    22222        1     1234


Q ss_pred             EecCCCHHHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcCCc----EEecCCCCCccceeeeCcceEEECC-CHHHHHH
Q 039338          366 VMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKP----VMASRFPSIKGTIVVDDEFGFMFAP-NVESLHK  440 (493)
Q Consensus       366 ~~g~~~~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G~P----vI~s~~~~~~~e~v~~~~~G~~~~~-d~~~l~~  440 (493)
                      +.|.++.+++.++|+.||++|+||.+ ||+|++++|||+||+|    ||+|+.+|.. +.+.   +|+++++ |++++++
T Consensus       340 l~~~~~~~el~aly~aaDv~vv~S~~-EG~~Lv~lEamA~g~P~~g~vVlS~~~G~~-~~l~---~gllVnP~d~~~lA~  414 (456)
T TIGR02400       340 LNRSYDREELMALYRAADVGLVTPLR-DGMNLVAKEYVAAQDPKDGVLILSEFAGAA-QELN---GALLVNPYDIDGMAD  414 (456)
T ss_pred             EcCCCCHHHHHHHHHhCcEEEECccc-cccCccHHHHHHhcCCCCceEEEeCCCCCh-HHhC---CcEEECCCCHHHHHH
Confidence            45688999999999999999999976 9999999999999999    9999988887 4442   7999999 9999999


Q ss_pred             HHHHHHHcCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 039338          441 TLEAAVSEGPMRLAQRGEACRQYAASMFTANKMALAYERLF  481 (493)
Q Consensus       441 ~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~  481 (493)
                      +|.+++++++++++++.+++++++.+ ||+...++++.+-+
T Consensus       415 aI~~aL~~~~~er~~r~~~~~~~v~~-~~~~~W~~~~l~~l  454 (456)
T TIGR02400       415 AIARALTMPLEEREERHRAMMDKLRK-NDVQRWREDFLSDL  454 (456)
T ss_pred             HHHHHHcCCHHHHHHHHHHHHHHHhh-CCHHHHHHHHHHHh
Confidence            99999998788999999999999877 89999999987654

This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib

>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis

Probab=99.94  E-value=9.4e-25  Score=213.50  Aligned_cols=300  Identities=15%  Similarity=0.179  Sum_probs=195.3

Q ss_pred             CCCCcEEEeCccc--hhHHhhh----ccCcEEEEeccchhhhh-hhh---hhhhhhcCCCCccchHhHhHHHHHHHHHHH
Q 039338          176 REPFDVVHSESVA--LPHWLAR----NVTNLAVSWHGIALESL-QSG---IFQDLTRKPLEPMSLAFNKSLQGVMLKVLN  245 (493)
Q Consensus       176 ~~~~DiI~~~~~~--~~~~~~~----~~p~~v~~~h~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (493)
                      ..++||+|+|.+.  ......+    .+| .|.|.|....... +..   ++..+.....+..     ..-...-.+...
T Consensus       146 ~~~~dViH~HeWm~g~a~~~lK~~~~~Vp-tVfTtHAT~~GR~l~~g~~~~y~~l~~~~~d~e-----A~~~~I~~r~~i  219 (590)
T cd03793         146 DEPAVVAHFHEWQAGVGLPLLRKRKVDVS-TIFTTHATLLGRYLCAGNVDFYNNLDYFDVDKE-----AGKRGIYHRYCI  219 (590)
T ss_pred             CCCCeEEEEcchhHhHHHHHHHHhCCCCC-EEEEecccccccccccCCcccchhhhhcchhhh-----hhcccchHHHHH
Confidence            4689999999752  2222222    346 9999997543221 111   1111110000000     000111223334


Q ss_pred             HHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCccc---------------chhhhhhhCCCCCC
Q 039338          246 EIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSL---------------GQSFRSRIGIPKNA  310 (493)
Q Consensus       246 ~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~---------------~~~~r~~~~i~~~~  310 (493)
                      |+.....||.++++|+.+++.+...|+.++++  |||||+|.+.|.+..+.               +..++..++++.++
T Consensus       220 E~~aa~~Ad~fttVS~it~~E~~~Ll~~~pd~--ViPNGid~~~f~~~~e~~~~~~~~k~ki~~f~~~~~~~~~~~~~d~  297 (590)
T cd03793         220 ERAAAHCAHVFTTVSEITAYEAEHLLKRKPDV--VLPNGLNVKKFSALHEFQNLHAQSKEKINEFVRGHFYGHYDFDLDK  297 (590)
T ss_pred             HHHHHhhCCEEEECChHHHHHHHHHhCCCCCE--EeCCCcchhhcccchhhhhhhHHhhhhhhHHHHHHHhhhcCCCCCC
Confidence            56778899999999999999999999988776  99999999998765421               22356678887777


Q ss_pred             cEEEEEeccccc-ccChHHHHHHHHHHHhh----CCCe---EEEEEeCC-----------Cc-----H------------
Q 039338          311 SLVLGVAGRLVK-DKGHPLLHEAFSKLMVK----YPDV---YLIVAGSG-----------PW-----E------------  354 (493)
Q Consensus       311 ~~~i~~~Gr~~~-~Kg~~~ll~a~~~l~~~----~~~~---~l~i~G~g-----------~~-----~------------  354 (493)
                      ++++..+||+.. +||++.+++|+.+|...    +.+.   -|+++-.+           ..     +            
T Consensus       298 tli~f~~GR~e~~nKGiDvlIeAl~rLn~~l~~~~~~~tVvafii~p~~~~~~~~~~l~g~~~~~~l~~~~~~i~~~i~~  377 (590)
T cd03793         298 TLYFFTAGRYEFSNKGADMFLEALARLNYLLKVEGSDTTVVAFFIMPAKTNNFNVESLKGQAVRKQLRDTVNSVKEKIGK  377 (590)
T ss_pred             eEEEEEeeccccccCCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEecCccCCcCHHhhcchHHHHHHHHHHHHHHHHhhh
Confidence            555544899998 99999999999998762    2322   23332111           00     0            


Q ss_pred             --------------H-----------------------------------------HHhhhc------Cc--EEEecCC-
Q 039338          355 --------------Q-----------------------------------------RYKDFG------HQ--VLVMGSM-  370 (493)
Q Consensus       355 --------------~-----------------------------------------~~~~l~------~~--V~~~g~~-  370 (493)
                                    +                                         .+++++      ++  |+|++.. 
T Consensus       378 ~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~il~~~r~~~l~N~~~drVkvif~P~~L  457 (590)
T cd03793         378 RLFEAALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVDDANDPILNHIRRIQLFNSPEDRVKVVFHPEFL  457 (590)
T ss_pred             hhhhHhhccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCcCccCHHHHHHHHhcCcCCCCCeEEEEEccccc
Confidence                          0                                         000000      22  4444321 


Q ss_pred             C------HHHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCc---cceeeeC-cceEEEC-------C
Q 039338          371 S------PAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIK---GTIVVDD-EFGFMFA-------P  433 (493)
Q Consensus       371 ~------~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~---~e~v~~~-~~G~~~~-------~  433 (493)
                      +      ..+..++|+.||++|+||.+ ||||++++|||+||+|||+|+.+|+.   .|++.++ ..|+.+.       +
T Consensus       458 ~~~~~~~g~~y~E~~~g~dl~v~PS~y-E~fG~~~lEAma~G~PvI~t~~~gf~~~v~E~v~~~~~~gi~V~~r~~~~~~  536 (590)
T cd03793         458 SSTNPLLGLDYEEFVRGCHLGVFPSYY-EPWGYTPAECTVMGIPSITTNLSGFGCFMEEHIEDPESYGIYIVDRRFKSPD  536 (590)
T ss_pred             CCCCCcCCcchHHHhhhceEEEecccc-CCCCcHHHHHHHcCCCEEEccCcchhhhhHHHhccCCCceEEEecCCccchH
Confidence            1      23578899999999999976 99999999999999999999998883   1555444 3566665       3


Q ss_pred             -CHHHHHHHHHHHHHcCcHHHHHHHHHHH-HHHHHhcCHHHHHHHHHHHHHHHhh
Q 039338          434 -NVESLHKTLEAAVSEGPMRLAQRGEACR-QYAASMFTANKMALAYERLFLCIKN  486 (493)
Q Consensus       434 -d~~~l~~~i~~ll~~~~~~~~~~~~~~~-~~~~~~fs~~~~~~~~~~~~~~i~~  486 (493)
                       ++++++++|.++++.  +.++.+..+++ +...+.|+|++++..|.+.|+..+.
T Consensus       537 e~v~~La~~m~~~~~~--~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~~~Al~  589 (590)
T cd03793         537 ESVQQLTQYMYEFCQL--SRRQRIIQRNRTERLSDLLDWRNLGRYYRKARQLALS  589 (590)
T ss_pred             HHHHHHHHHHHHHhCC--cHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhh
Confidence             678889999998854  45555555544 2334559999999999999987764

GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.

>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]

Probab=99.93  E-value=3.5e-24  Score=205.28  Aligned_cols=380  Identities=17%  Similarity=0.145  Sum_probs=255.5

Q ss_pred             CCCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHh---------CCCEEEEEecCCCCCCCCCCccc--cCCCCCCCCC
Q 039338           80 SKFTLKIAVFSRKWPISTTPGGMERHAHTLHVALAR---------RGHRVHIFTSPVDNINSPSISHQ--ENDDGSNNKY  148 (493)
Q Consensus        80 ~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~---------~G~~V~v~~~~~~~~~~~~~~~~--~~~~~~~~~~  148 (493)
                      .+..++++++.+..    ..||.++-....+-.+..         .||+|.+++........+.....  ....+.....
T Consensus        31 ~~~~~~~~~~~~~~----~~gg~er~~v~~~~~l~s~~~~lg~~d~G~qV~~l~~h~~al~~~~~~~~~~~~l~~~~~i~  106 (495)
T KOG0853|consen   31 EKPFEHVTFIHPDL----GIGGAERLVVDAAVHLLSGQDVLGLPDTGGQVVYLTSHEDALEMPLLLRCFAETLDGTPPIL  106 (495)
T ss_pred             cccchhheeecccc----ccCchHHHhHHHHHHHHhcccccCCCCCCceEEEEehhhhhhcchHHHHHHHHHhcCCCceE
Confidence            34467899998864    779999999988888888         99999999987666211110000  0000000000


Q ss_pred             CceEeecCCCCccc-----------cccchHHHHHHhcCCCCcEEEeCccchhHHhhhc------cCcEEEEeccchhhh
Q 039338          149 PLLHFHEGEADKWR-----------YSKGWEQFDEENQREPFDVVHSESVALPHWLARN------VTNLAVSWHGIALES  211 (493)
Q Consensus       149 ~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~DiI~~~~~~~~~~~~~~------~p~~v~~~h~~~~~~  211 (493)
                      ......+...+.+.           .........+..  .+.|.|+........++.+.      ++++.+..|......
T Consensus       107 vv~~~lP~~~~~~~~~~~~~~~~~il~~~~~~~~k~~--~~~d~~i~d~~~~~~~l~~~~~~p~~~~~i~~~~h~~~~ll  184 (495)
T KOG0853|consen  107 VVGDWLPRAMGQFLEQVAGCAYLRILRIPFGILFKWA--EKVDPIIEDFVSACVPLLKQLSGPDVIIKIYFYCHFPDSLL  184 (495)
T ss_pred             EEEeecCcccchhhhhhhccceeEEEEeccchhhhhh--hhhceeecchHHHHHHHHHHhcCCcccceeEEeccchHHHh
Confidence            01111111111000           000011111111  46788877765444433321      334666777654433


Q ss_pred             hhhh-hhhhhhcCCCCccchHhHhHHHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHh-CCCCCcEEEecCCccCCC
Q 039338          212 LQSG-IFQDLTRKPLEPMSLAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVY-QIPSERVHVILNGINENE  289 (493)
Q Consensus       212 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~-~~~~~~v~vi~ngvd~~~  289 (493)
                      .... +...+               ....+.+.  +......++.+++.|...+..+...+ .++..++.+.+.++|.+.
T Consensus       185 a~r~g~~~~l---------------~~~~l~~~--e~e~~~~~~~~~~ns~~~~~~f~~~~~~L~~~d~~~~y~ei~~s~  247 (495)
T KOG0853|consen  185 AKRLGVLKVL---------------YRHALDKI--EEETTGLAWKILVNSYFTKRQFKATFVSLSNSDITSTYPEIDGSW  247 (495)
T ss_pred             ccccCcccee---------------ehhhhhhh--hhhhhhccceEecchhhhhhhhhhhhhhcCCCCcceeeccccchh
Confidence            3222 11111               11112221  11345678899999999999888765 244455888899999877


Q ss_pred             ccC-----CcccchhhhhhhCCCCCCcEEEEEecccccccChHHHHHHHHHHHhhC-----CCeEEEEEeCC-------C
Q 039338          290 YGV-----DLSLGQSFRSRIGIPKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKY-----PDVYLIVAGSG-------P  352 (493)
Q Consensus       290 ~~~-----~~~~~~~~r~~~~i~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~-----~~~~l~i~G~g-------~  352 (493)
                      +.+     ....+...|...++...+ ..+..+.++.+.||++.+++++..+....     ++.++.++|+.       .
T Consensus       248 ~~~~~~~~~~~~~~~~r~~~~v~~~d-~~~~siN~~~pgkd~~l~l~a~~~~~~~i~~~~~~~~hl~~~g~~G~d~~~se  326 (495)
T KOG0853|consen  248 FTYGQYESHLELRLPVRLYRGVSGID-RFFPSINRFEPGKDQDLALPAFTLLHDSIPEPSISSEHLVVAGSRGYDERDSE  326 (495)
T ss_pred             ccccccccchhcccccceeeeecccc-eEeeeeeecCCCCCceeehhhHHhhhcccCCCCCCceEEEEecCCCccccchh
Confidence            664     223334455566666655 67779999999999999999999998876     56889999832       1


Q ss_pred             cHHHHhh-------h---cCcEEEecCCCHHHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCcccee
Q 039338          353 WEQRYKD-------F---GHQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIV  422 (493)
Q Consensus       353 ~~~~~~~-------l---~~~V~~~g~~~~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v  422 (493)
                      ...++++       .   ++.|.|+...++.+...+++.+.+++..... |.||++++|||+||+|||+++.||.. |+|
T Consensus       327 n~~~~~el~~lie~~~l~g~~v~~~~s~~~~~~yrl~adt~~v~~qPa~-E~FGiv~IEAMa~glPvvAt~~GGP~-EiV  404 (495)
T KOG0853|consen  327 NVEYLKELLSLIEEYDLLGQFVWFLPSTTRVAKYRLAADTKGVLYQPAN-EHFGIVPIEAMACGLPVVATNNGGPA-EIV  404 (495)
T ss_pred             hHHHHHHHHHHHHHhCccCceEEEecCCchHHHHHHHHhcceEEecCCC-CCccceeHHHHhcCCCEEEecCCCce-EEE
Confidence            2222222       2   3778888988888887778888776653324 99999999999999999999999988 999


Q ss_pred             eeCcceEEECCCHH---HHHHHHHHHHHcCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhh
Q 039338          423 VDDEFGFMFAPNVE---SLHKTLEAAVSEGPMRLAQRGEACRQYAASMFTANKMALAYERLFLCIKN  486 (493)
Q Consensus       423 ~~~~~G~~~~~d~~---~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~i~~  486 (493)
                      .++.+|++++++.+   .+++++.++..| ++.+.+|+++++++++++|+|.++.+++.++..+...
T Consensus       405 ~~~~tG~l~dp~~e~~~~~a~~~~kl~~~-p~l~~~~~~~G~~rV~e~fs~~~~~~ri~~~~~~~~~  470 (495)
T KOG0853|consen  405 VHGVTGLLIDPGQEAVAELADALLKLRRD-PELWARMGKNGLKRVKEMFSWQHYSERIASVLGKYLQ  470 (495)
T ss_pred             EcCCcceeeCCchHHHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhHhcCC
Confidence            99999999999655   699999999999 9999999999999999999999999999988876543

>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=99.93  E-value=1.1e-24  Score=189.65  Aligned_cols=162  Identities=33%  Similarity=0.611  Sum_probs=140.5

Q ss_pred             hhhhhhhCCCCCCcEEEEEecccccccChHHHHHHHHHHHhh-CCCeEEEEEeCCCcHHHHhh------hcCcEEEecCC
Q 039338          298 QSFRSRIGIPKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVK-YPDVYLIVAGSGPWEQRYKD------FGHQVLVMGSM  370 (493)
Q Consensus       298 ~~~r~~~~i~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~-~~~~~l~i~G~g~~~~~~~~------l~~~V~~~g~~  370 (493)
                      +..+.+.+.+.++ ++|+++|++.+.||++.+++++..+.++ .++++++|+|.+.....++.      +.++|.|+|.+
T Consensus         3 ~~~~~~~~~~~~~-~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~i~~~~~~   81 (172)
T PF00534_consen    3 DKLREKLKIPDKK-KIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNYKLVIVGDGEYKKELKNLIEKLNLKENIIFLGYV   81 (172)
T ss_dssp             HHHHHHTTT-TTS-EEEEEESESSGGGTHHHHHHHHHHHHHHHHTTEEEEEESHCCHHHHHHHHHHHTTCGTTEEEEESH
T ss_pred             HHHHHHcCCCCCC-eEEEEEecCccccCHHHHHHHHHHHHhhcCCCeEEEEEcccccccccccccccccccccccccccc
Confidence            3456666666665 8889999999999999999999999874 68999999997766554443      23799999999


Q ss_pred             CHHHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCccceeeeCcceEEECC-CHHHHHHHHHHHHHcC
Q 039338          371 SPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAP-NVESLHKTLEAAVSEG  449 (493)
Q Consensus       371 ~~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~~-d~~~l~~~i~~ll~~~  449 (493)
                      +++++.++|+.||++++||.. |++|++++|||++|+|||+++.++.. |++.++.+|+++++ |+++++++|.+++++ 
T Consensus        82 ~~~~l~~~~~~~di~v~~s~~-e~~~~~~~Ea~~~g~pvI~~~~~~~~-e~~~~~~~g~~~~~~~~~~l~~~i~~~l~~-  158 (172)
T PF00534_consen   82 PDDELDELYKSSDIFVSPSRN-EGFGLSLLEAMACGCPVIASDIGGNN-EIINDGVNGFLFDPNDIEELADAIEKLLND-  158 (172)
T ss_dssp             SHHHHHHHHHHTSEEEE-BSS-BSS-HHHHHHHHTT-EEEEESSTHHH-HHSGTTTSEEEESTTSHHHHHHHHHHHHHH-
T ss_pred             cccccccccccceeccccccc-cccccccccccccccceeeccccCCc-eeeccccceEEeCCCCHHHHHHHHHHHHCC-
Confidence            999999999999999999976 99999999999999999999998888 89999999999999 999999999999999 


Q ss_pred             cHHHHHHHHHHHHH
Q 039338          450 PMRLAQRGEACRQY  463 (493)
Q Consensus       450 ~~~~~~~~~~~~~~  463 (493)
                      ++.++.|+++++++
T Consensus       159 ~~~~~~l~~~~~~~  172 (172)
T PF00534_consen  159 PELRQKLGKNARER  172 (172)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCC
Confidence            89999999999875

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....

>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional

Probab=99.92  E-value=1.5e-22  Score=194.66  Aligned_cols=283  Identities=15%  Similarity=0.092  Sum_probs=196.2

Q ss_pred             CCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCCCccccccchHHHHHHhcCC
Q 039338           98 TPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEADKWRYSKGWEQFDEENQRE  177 (493)
Q Consensus        98 ~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (493)
                      ...|+...-..+.+.+.+.|+++.-+......                              ..........+..++...
T Consensus        13 ~~~a~~ka~~d~~~~~~~~g~~~~~~~~~~~~------------------------------~~~~~~~~~~~~~~~~~~   62 (333)
T PRK09814         13 GNSAALKAKNDVTKIAKQLGFEELGIYFYNIK------------------------------RDSLSERSKRLDGILASL   62 (333)
T ss_pred             ccchHHHHHHHHHHHHHHCCCeEeEEEecccc------------------------------cchHHHHHHHHHHHHhcC
Confidence            45566777888899999999987665432211                              000111123344455556


Q ss_pred             CC-cEEEeCccchhH------H--hhh--ccCcEEEEeccchhhhhhhhhhhhhhcCCCCccchHhHhHHHHHHHHHHHH
Q 039338          178 PF-DVVHSESVALPH------W--LAR--NVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQGVMLKVLNE  246 (493)
Q Consensus       178 ~~-DiI~~~~~~~~~------~--~~~--~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (493)
                      ++ |+||++++.+..      +  ..+  ++| ++..+|+.++.....     .             ...      ...+
T Consensus        63 ~~~Dvv~~~~P~~~~~~~~~~~~~~~k~~~~k-~i~~ihD~~~~~~~~-----~-------------~~~------~~~~  117 (333)
T PRK09814         63 KPGDIVIFQFPTWNGFEFDRLFVDKLKKKQVK-IIILIHDIEPLRFDS-----N-------------YYL------MKEE  117 (333)
T ss_pred             CCCCEEEEECCCCchHHHHHHHHHHHHHcCCE-EEEEECCcHHHhccc-----c-------------chh------hHHH
Confidence            77 999998764322      1  112  245 999999976532110     0             000      1124


Q ss_pred             HHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCCCCCCcEEEEEecccccccCh
Q 039338          247 IRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVAGRLVKDKGH  326 (493)
Q Consensus       247 ~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Gr~~~~Kg~  326 (493)
                      ..+++++|.++++|+.+++.+.+ .|++..++.++++..+.......        .   .+.. ...|+|+|++....+ 
T Consensus       118 ~~~~~~aD~iI~~S~~~~~~l~~-~g~~~~~i~~~~~~~~~~~~~~~--------~---~~~~-~~~i~yaG~l~k~~~-  183 (333)
T PRK09814        118 IDMLNLADVLIVHSKKMKDRLVE-EGLTTDKIIVQGIFDYLNDIELV--------K---TPSF-QKKINFAGNLEKSPF-  183 (333)
T ss_pred             HHHHHhCCEEEECCHHHHHHHHH-cCCCcCceEeccccccccccccc--------c---cccC-CceEEEecChhhchH-
Confidence            47788999999999999999987 58777788877765443211110        0   0122 257889999984322 


Q ss_pred             HHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhhhcCcEEEecCCCHHHHHHHHHHcCEEEeCCCC----------CCCCC
Q 039338          327 PLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDFGHQVLVMGSMSPAELRAFYNAIDIFVNPTLR----------PQGLD  396 (493)
Q Consensus       327 ~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~l~~~V~~~g~~~~~~~~~~~~~adv~v~ps~~----------~eg~~  396 (493)
                               +.+..++++|+++|+|+..+   ...++|.|.|+++++++..+|+. |+.+.+...          ..++|
T Consensus       184 ---------l~~~~~~~~l~i~G~g~~~~---~~~~~V~f~G~~~~eel~~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P  250 (333)
T PRK09814        184 ---------LKNWSQGIKLTVFGPNPEDL---ENSANISYKGWFDPEELPNELSK-GFGLVWDGDTNDGEYGEYYKYNNP  250 (333)
T ss_pred             ---------HHhcCCCCeEEEECCCcccc---ccCCCeEEecCCCHHHHHHHHhc-CcCeEEcCCCCCccchhhhhccch
Confidence                     11123678999999988654   44589999999999999999998 766553311          14689


Q ss_pred             hHHHHHHHcCCcEEecCCCCCccceeeeCcceEEECCCHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHh
Q 039338          397 LTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAPNVESLHKTLEAAVSEGPMRLAQRGEACRQYAASM  467 (493)
Q Consensus       397 ~~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~  467 (493)
                      .++.|+|+||+|||+++.++.. ++|.++++|++++ +.+++++++.++.   .+.+.+|++++++.++..
T Consensus       251 ~K~~~ymA~G~PVI~~~~~~~~-~~V~~~~~G~~v~-~~~el~~~l~~~~---~~~~~~m~~n~~~~~~~~  316 (333)
T PRK09814        251 HKLSLYLAAGLPVIVWSKAAIA-DFIVENGLGFVVD-SLEELPEIIDNIT---EEEYQEMVENVKKISKLL  316 (333)
T ss_pred             HHHHHHHHCCCCEEECCCccHH-HHHHhCCceEEeC-CHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999988 9999999999998 7889999998852   567889999999988663

>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional

Probab=99.91  E-value=6.3e-23  Score=215.16  Aligned_cols=277  Identities=20%  Similarity=0.205  Sum_probs=199.0

Q ss_pred             CcEEEeCccc---hhHHhhhccC--cEEEEeccchhhhhhhhhhhhhhcCCCCccchHhHhHHHHHHHHHHHHHHhhccC
Q 039338          179 FDVVHSESVA---LPHWLARNVT--NLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQGVMLKVLNEIRFFNKY  253 (493)
Q Consensus       179 ~DiI~~~~~~---~~~~~~~~~p--~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (493)
                      -|+|.+|.+.   ++.++.+..|  ++...+|-+++.   ++++..+.             .....       .+-+-.|
T Consensus       148 ~d~vWvhDYhL~llp~~lR~~~~~~~igfFlHiPFPs---~e~fr~lp-------------~r~~i-------l~gll~a  204 (797)
T PLN03063        148 GDVVWCHDYHLMFLPQYLKEYNNKMKVGWFLHTPFPS---SEIYKTLP-------------SRSEL-------LRAVLTA  204 (797)
T ss_pred             CCEEEEecchhhhHHHHHHHhCCCCcEEEEecCCCCC---HHHHhhCC-------------CHHHH-------HHHHhcC
Confidence            3799999874   4455555443  377888876543   22333221             00111       1334467


Q ss_pred             CeEEEcChhHHHHHHHH----hCC-----------CCCcEEEecCCccCCCccCCccc---c---hhhhhhhCCCCCCcE
Q 039338          254 AHHVAISDSCGEMLRDV----YQI-----------PSERVHVILNGINENEYGVDLSL---G---QSFRSRIGIPKNASL  312 (493)
Q Consensus       254 d~ii~~S~~~~~~~~~~----~~~-----------~~~~v~vi~ngvd~~~~~~~~~~---~---~~~r~~~~i~~~~~~  312 (493)
                      |.|-+.+......+.+.    .+.           ...++.++|+|||.+.|.+....   .   ..+++.++   ++ .
T Consensus       205 DligF~t~~y~r~Fl~~~~r~l~~~~~~~~i~~~gr~~~I~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~---~~-~  280 (797)
T PLN03063        205 DLIGFHTYDFARHFLSACTRILGVEGTHEGVVDQGKVTRVAVFPIGIDPERFINTCELPEVKQHMKELKRFFA---GR-K  280 (797)
T ss_pred             CEEEeCCHHHHHHHHHHHHHHhCccccCCceEECCeEEEEEEEecccCHHHHHHHhcChhHHHHHHHHHHhcC---CC-e
Confidence            88888887777665541    121           22568899999999887653221   1   12333332   33 5


Q ss_pred             EEEEecccccccChHHHHHHHHHHHhhCCCeE----EEEEe-----CCCcHHH----Hhhhc----C--------cEE-E
Q 039338          313 VLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVY----LIVAG-----SGPWEQR----YKDFG----H--------QVL-V  366 (493)
Q Consensus       313 ~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~----l~i~G-----~g~~~~~----~~~l~----~--------~V~-~  366 (493)
                      +|+++||+++.||++.+++|++++.+++|+++    |+.++     +++..+.    ++++.    .        .|. +
T Consensus       281 lIl~VgRLd~~KGi~~lL~Afe~lL~~~P~~~~kvvLvqia~psr~~~~~y~~l~~~v~~l~g~In~~~g~~~~~pv~~l  360 (797)
T PLN03063        281 VILGVDRLDMIKGIPQKYLAFEKFLEENPEWRDKVMLVQIAVPTRNDVPEYQKLKSQVHELVGRINGRFGSVSSVPIHHL  360 (797)
T ss_pred             EEEEecccccccCHHHHHHHHHHHHHhCccccCcEEEEEEecCCCCchHHHHHHHHHHHHHHHHhhcccccCCCceeEEe
Confidence            77799999999999999999999998888753    44333     2333222    22221    1        123 3


Q ss_pred             ecCCCHHHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcCCc----EEecCCCCCccceeeeCcceEEECC-CHHHHHHH
Q 039338          367 MGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKP----VMASRFPSIKGTIVVDDEFGFMFAP-NVESLHKT  441 (493)
Q Consensus       367 ~g~~~~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G~P----vI~s~~~~~~~e~v~~~~~G~~~~~-d~~~l~~~  441 (493)
                      .+.++.+++..+|+.||++|+||.+ ||+|++++|||+||+|    +|+|+.+|.. +.+  +..|++++| |+++++++
T Consensus       361 ~~~v~~~el~aly~~ADvfvvtSlr-EGmnLv~lEamA~g~p~~gvlVlSe~~G~~-~~l--~~~allVnP~D~~~lA~A  436 (797)
T PLN03063        361 DCSVDFNYLCALYAITDVMLVTSLR-DGMNLVSYEFVACQKAKKGVLVLSEFAGAG-QSL--GAGALLVNPWNITEVSSA  436 (797)
T ss_pred             cCCCCHHHHHHHHHhCCEEEeCccc-cccCcchhhHheeecCCCCCEEeeCCcCch-hhh--cCCeEEECCCCHHHHHHH
Confidence            4578999999999999999999986 9999999999999999    9999999988 443  557999999 99999999


Q ss_pred             HHHHHHcCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhc
Q 039338          442 LEAAVSEGPMRLAQRGEACRQYAASMFTANKMALAYERLFLCIKNE  487 (493)
Q Consensus       442 i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~i~~~  487 (493)
                      |.+++..++++++++.++.++++.+ ++|...++.+.+.+++...+
T Consensus       437 I~~aL~m~~~er~~r~~~~~~~v~~-~~~~~Wa~~fl~~l~~~~~~  481 (797)
T PLN03063        437 IKEALNMSDEERETRHRHNFQYVKT-HSAQKWADDFMSELNDIIVE  481 (797)
T ss_pred             HHHHHhCCHHHHHHHHHHHHHhhhh-CCHHHHHHHHHHHHHHHhhh
Confidence            9999997688888888999999988 79999999999988887643

>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]

Probab=99.91  E-value=4e-21  Score=171.55  Aligned_cols=376  Identities=15%  Similarity=0.148  Sum_probs=245.5

Q ss_pred             EEEEEeccCCCCCCCCchHHHHHHHHHHHHhC--CCEEEEEecCCCCCCCCC--CccccCCCCCCCCCCceEeecCCCCc
Q 039338           85 KIAVFSRKWPISTTPGGMERHAHTLHVALARR--GHRVHIFTSPVDNINSPS--ISHQENDDGSNNKYPLLHFHEGEADK  160 (493)
Q Consensus        85 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~--G~~V~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (493)
                      .+++++++.   ...||++++++.-.+.+++.  .+...+++.+...  .+.  .........+..+...+.+...+...
T Consensus        45 tvgfFHPYC---NAGGGGErVLW~Avr~~q~k~~n~~~viYsGD~n~--t~~~IL~k~k~~F~idlDs~nI~Fi~Lk~R~  119 (465)
T KOG1387|consen   45 TVGFFHPYC---NAGGGGERVLWKAVRITQRKFPNNVIVIYSGDFNV--TPENILNKVKNKFDIDLDSDNIFFIYLKLRY  119 (465)
T ss_pred             EEEEecccc---cCCCCcceehhHHHHHHHHhCCCceEEEEeCCCCC--CHHHHHHHHHHhcCceecccceEEEEEEeee
Confidence            488888765   57788899999999998876  3334444433222  111  00011111233344444444332221


Q ss_pred             c------ccc--------cchHHHHHHhcCCCCcEEEeC-cc--chhHHh-hhccCcEEEEeccchhhhhhhhhhhhhhc
Q 039338          161 W------RYS--------KGWEQFDEENQREPFDVVHSE-SV--ALPHWL-ARNVTNLAVSWHGIALESLQSGIFQDLTR  222 (493)
Q Consensus       161 ~------~~~--------~~~~~~~~~~~~~~~DiI~~~-~~--~~~~~~-~~~~p~~v~~~h~~~~~~~~~~~~~~~~~  222 (493)
                      +      ...        .+...+. .+-+..|||.+-. ++  .++.+. .+++| ++...|-+...+   |....+..
T Consensus       120 lVea~~~~hfTllgQaigsmIl~~E-ai~r~~Pdi~IDtMGY~fs~p~~r~l~~~~-V~aYvHYP~iS~---DML~~l~q  194 (465)
T KOG1387|consen  120 LVEASTWKHFTLLGQAIGSMILAFE-AIIRFPPDIFIDTMGYPFSYPIFRRLRRIP-VVAYVHYPTIST---DMLKKLFQ  194 (465)
T ss_pred             eeecccccceehHHHHHHHHHHHHH-HHHhCCchheEecCCCcchhHHHHHHccCc-eEEEEecccccH---HHHHHHHh
Confidence            1      111        1112222 2337889987643 33  233333 34567 888888654332   33222222


Q ss_pred             CCCCccchHhHhHHHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhh
Q 039338          223 KPLEPMSLAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRS  302 (493)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~  302 (493)
                      .+... ...+.+..+.++...+ ....-..+|.+++.|.+..+.+.+.++.  .++.+++++.+.+.+....        
T Consensus       195 rq~s~-~l~~~KlaY~rlFa~l-Y~~~G~~ad~vm~NssWT~nHI~qiW~~--~~~~iVyPPC~~e~lks~~--------  262 (465)
T KOG1387|consen  195 RQKSG-ILVWGKLAYWRLFALL-YQSAGSKADIVMTNSSWTNNHIKQIWQS--NTCSIVYPPCSTEDLKSKF--------  262 (465)
T ss_pred             hhhcc-hhhhHHHHHHHHHHHH-HHhccccceEEEecchhhHHHHHHHhhc--cceeEEcCCCCHHHHHHHh--------
Confidence            11111 1111122222221111 1133467899999999999999998753  6888999988876443221        


Q ss_pred             hhCCCCCCcEEEEEecccccccChHHHHHHHHHHHhh------CCCeEEEEEeCCC---cHHHHhhh---------cCcE
Q 039338          303 RIGIPKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVK------YPDVYLIVAGSGP---WEQRYKDF---------GHQV  364 (493)
Q Consensus       303 ~~~i~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~------~~~~~l~i~G~g~---~~~~~~~l---------~~~V  364 (493)
                        +-...+...++++|.+.|.|++. +++.++....+      .++++|+++|+..   +.++++.+         ..+|
T Consensus       263 --~te~~r~~~ll~l~Q~RPEKnH~-~Lql~Al~~~~~pl~a~~~~iKL~ivGScRneeD~ervk~Lkd~a~~L~i~~~v  339 (465)
T KOG1387|consen  263 --GTEGERENQLLSLAQFRPEKNHK-ILQLFALYLKNEPLEASVSPIKLIIVGSCRNEEDEERVKSLKDLAEELKIPKHV  339 (465)
T ss_pred             --cccCCcceEEEEEeecCcccccH-HHHHHHHHHhcCchhhccCCceEEEEeccCChhhHHHHHHHHHHHHhcCCccce
Confidence              11233447889999999999999 55444433322      3579999999743   23333322         2789


Q ss_pred             EEecCCCHHHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCccceeee---CcceEEECCCHHHHHHH
Q 039338          365 LVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVD---DEFGFMFAPNVESLHKT  441 (493)
Q Consensus       365 ~~~g~~~~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~---~~~G~~~~~d~~~l~~~  441 (493)
                      .|.-.+|.+++..+|..|.+.|+.- +.|.||+.+.||||+|+-+|+.+.||-.=++|.+   ..+|++.+ +.++.+++
T Consensus       340 ~F~~N~Py~~lv~lL~~a~iGvh~M-wNEHFGIsVVEyMAAGlIpi~h~SgGP~lDIV~~~~G~~tGFla~-t~~EYaE~  417 (465)
T KOG1387|consen  340 QFEKNVPYEKLVELLGKATIGVHTM-WNEHFGISVVEYMAAGLIPIVHNSGGPLLDIVTPWDGETTGFLAP-TDEEYAEA  417 (465)
T ss_pred             EEEecCCHHHHHHHhccceeehhhh-hhhhcchhHHHHHhcCceEEEeCCCCCceeeeeccCCccceeecC-ChHHHHHH
Confidence            9999999999999999999999977 5699999999999999999999888865466664   35788886 88999999


Q ss_pred             HHHHHHcCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhcc
Q 039338          442 LEAAVSEGPMRLAQRGEACRQYAASMFTANKMALAYERLFLCIKNET  488 (493)
Q Consensus       442 i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~i~~~~  488 (493)
                      +.+++..+.+.+..|++++|..+.+ |+..++.+.+...+..++.+.
T Consensus       418 iLkIv~~~~~~r~~~r~~AR~s~~R-FsE~~F~kd~~~~i~kll~e~  463 (465)
T KOG1387|consen  418 ILKIVKLNYDERNMMRRNARKSLAR-FGELKFDKDWENPICKLLEEE  463 (465)
T ss_pred             HHHHHHcCHHHHHHHHHHHHHHHHH-hhHHHHHHhHhHHHHHhhccc
Confidence            9999998788899999999988876 999999999999999888764

>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds

Probab=99.91  E-value=2.8e-22  Score=182.72  Aligned_cols=216  Identities=29%  Similarity=0.365  Sum_probs=159.9

Q ss_pred             EEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCCCcccccc
Q 039338           86 IAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEADKWRYSK  165 (493)
Q Consensus        86 Il~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (493)
                      |++++..+++  ..||.+++...+++.|+++||+|+++.                                        .
T Consensus         1 i~~i~~~~~~--~~~G~~~~~~~l~~~L~~~g~~v~v~~----------------------------------------~   38 (229)
T cd01635           1 ILLVSTPLLP--GGGGVELVLLDLAKALARRGHEVEVVA----------------------------------------L   38 (229)
T ss_pred             CeeeccccCC--CCCCchhHHHHHHHHHHHcCCeEEEEE----------------------------------------e
Confidence            4677776543  579999999999999999999999998                                        1


Q ss_pred             chHHHHHHhcCCCCcEEEeCccchhHH------hhhccCcEEEEeccchhhhhhhhhhhhhhcCCCCccchHhHhHHHHH
Q 039338          166 GWEQFDEENQREPFDVVHSESVALPHW------LARNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQGV  239 (493)
Q Consensus       166 ~~~~~~~~~~~~~~DiI~~~~~~~~~~------~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (493)
                      ....+...+++.+||+||+++.....+      .....| ++.+.|+.+........                       
T Consensus        39 ~~~~~~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~-~i~~~h~~~~~~~~~~~-----------------------   94 (229)
T cd01635          39 LLLLLLRILRGFKPDVVHAHGYYPAPLALLLAARLLGIP-LVLTVHGVNRSLLEGVP-----------------------   94 (229)
T ss_pred             chHHHHHHHhhcCCCEEEEcCCCcHHHHHHHHHhhCCCC-EEEEEcCccHhhcccCc-----------------------
Confidence            123344444467999999998643332      223445 89999987543211000                       


Q ss_pred             HHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCCCCCCcEEEEEecc
Q 039338          240 MLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVAGR  319 (493)
Q Consensus       240 ~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Gr  319 (493)
                                       .       ..+.....                                   .   ....++|+
T Consensus        95 -----------------~-------~~~~~~~~-----------------------------------~---~~~~~~g~  112 (229)
T cd01635          95 -----------------L-------SLLALSIG-----------------------------------L---ADKVFVGR  112 (229)
T ss_pred             -----------------H-------HHHHHHHh-----------------------------------h---cceEEEEe
Confidence                             0       00000000                                   0   00118999


Q ss_pred             cccccChHHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhh------hcCcEEEecCC-CHHHHHHHHHHcCEEEeCCCCC
Q 039338          320 LVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKD------FGHQVLVMGSM-SPAELRAFYNAIDIFVNPTLRP  392 (493)
Q Consensus       320 ~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~------l~~~V~~~g~~-~~~~~~~~~~~adv~v~ps~~~  392 (493)
                      +.+.||++.+++++..+.++.++++++++|.+......++      ..++|.+.|++ +.+++..+++.||+++.|+.. 
T Consensus       113 ~~~~k~~~~~~~a~~~l~~~~~~~~~~i~G~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~di~l~~~~~-  191 (229)
T cd01635         113 LAPEKGLDDLIEAFALLKERGPDLKLVIAGDGPEREYLEELLAALLLLDRVIFLGGLDPEELLALLLAAADVFVLPSLR-  191 (229)
T ss_pred             ecccCCHHHHHHHHHHHHHhCCCeEEEEEeCCCChHHHHHHHHhcCCcccEEEeCCCCcHHHHHHHhhcCCEEEecccc-
Confidence            9999999999999999998889999999999876665442      23899999998 445666666669999999964 


Q ss_pred             CCCChHHHHHHHcCCcEEecCCCCCccceeeeCcceEEE
Q 039338          393 QGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMF  431 (493)
Q Consensus       393 eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~  431 (493)
                      |++|++++|||++|+|||+++.++.. |++.++++|+++
T Consensus       192 e~~~~~~~Eam~~g~pvi~s~~~~~~-e~i~~~~~g~~~  229 (229)
T cd01635         192 EGFGLVVLEAMACGLPVIATDVGGPP-EIVEDGLTGLLV  229 (229)
T ss_pred             cCcChHHHHHHhCCCCEEEcCCCCcc-eEEECCCceEEC
Confidence            89999999999999999999999998 888889999874

The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.

>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase

Probab=99.90  E-value=9e-23  Score=199.68  Aligned_cols=345  Identities=12%  Similarity=0.104  Sum_probs=215.1

Q ss_pred             eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhC-CCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCCC---
Q 039338           84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARR-GHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEAD---  159 (493)
Q Consensus        84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~-G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  159 (493)
                      |||++++..=|      . -..+..+.++|.+. ++++.++.+..+.  ....+..+.   .... ..+.......+   
T Consensus         1 ~~i~~~~gtr~------~-~~~~~p~~~~l~~~~~~~~~~~~tg~h~--~~~~~~~~~---~~i~-~~~~~~~~~~~~~~   67 (365)
T TIGR00236         1 LKVSIVLGTRP------E-AIKMAPLIRALKKYPEIDSYVIVTAQHR--EMLDQVLDL---FHLP-PDYDLNIMSPGQTL   67 (365)
T ss_pred             CeEEEEEecCH------H-HHHHHHHHHHHhhCCCCCEEEEEeCCCH--HHHHHHHHh---cCCC-CCeeeecCCCCCCH
Confidence            79999987422      2 22477899999886 6777777765543  111111111   1111 11222211111   


Q ss_pred             ccccccchHHHHHHhcCCCCcEEEeCccc---hhH---HhhhccCcEEEEeccchhhhhhhhhhhhhhcCCCCccchHhH
Q 039338          160 KWRYSKGWEQFDEENQREPFDVVHSESVA---LPH---WLARNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFN  233 (493)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~DiI~~~~~~---~~~---~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (493)
                      ..........+.+.+++.+||+||+|+..   +.+   ....++| ++..-+|....    +.+.   ..+         
T Consensus        68 ~~~~~~~~~~l~~~l~~~~pDiv~~~gd~~~~la~a~aa~~~~ip-v~h~~~g~~s~----~~~~---~~~---------  130 (365)
T TIGR00236        68 GEITSNMLEGLEELLLEEKPDIVLVQGDTTTTLAGALAAFYLQIP-VGHVEAGLRTG----DRYS---PMP---------  130 (365)
T ss_pred             HHHHHHHHHHHHHHHHHcCCCEEEEeCCchHHHHHHHHHHHhCCC-EEEEeCCCCcC----CCCC---CCc---------
Confidence            11223345667777788999999999642   222   2334567 65544432100    0000   000         


Q ss_pred             hHHHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCc-cCCCccCCcccchhhhhhhCCCCCCcE
Q 039338          234 KSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGI-NENEYGVDLSLGQSFRSRIGIPKNASL  312 (493)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngv-d~~~~~~~~~~~~~~r~~~~i~~~~~~  312 (493)
                      ...    .+.    ...+.+|.++++|+..++.+.+ .|++++++.+++||+ |...+.........++++++.  ++++
T Consensus       131 ~~~----~r~----~~~~~ad~~~~~s~~~~~~l~~-~G~~~~~I~vign~~~d~~~~~~~~~~~~~~~~~~~~--~~~~  199 (365)
T TIGR00236       131 EEI----NRQ----LTGHIADLHFAPTEQAKDNLLR-ENVKADSIFVTGNTVIDALLTNVEIAYSSPVLSEFGE--DKRY  199 (365)
T ss_pred             cHH----HHH----HHHHHHHhccCCCHHHHHHHHH-cCCCcccEEEeCChHHHHHHHHHhhccchhHHHhcCC--CCCE
Confidence            000    010    1122478899999999999987 589989999999996 432222111123455666662  3335


Q ss_pred             EEEEecccc-cccChHHHHHHHHHHHhhCCCeEEEEEeCCC--cHHHHhh-hc--CcEEEecCCCHHHHHHHHHHcCEEE
Q 039338          313 VLGVAGRLV-KDKGHPLLHEAFSKLMVKYPDVYLIVAGSGP--WEQRYKD-FG--HQVLVMGSMSPAELRAFYNAIDIFV  386 (493)
Q Consensus       313 ~i~~~Gr~~-~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~--~~~~~~~-l~--~~V~~~g~~~~~~~~~~~~~adv~v  386 (493)
                      +++..+|.. ..|+++.+++++.++.++.+++++++.|.+.  ..+.+.+ ++  ++|.|+|.++..++..+++.+|+++
T Consensus       200 vl~~~hr~~~~~k~~~~ll~a~~~l~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~ad~vv  279 (365)
T TIGR00236       200 ILLTLHRRENVGEPLENIFKAIREIVEEFEDVQIVYPVHLNPVVREPLHKHLGDSKRVHLIEPLEYLDFLNLAANSHLIL  279 (365)
T ss_pred             EEEecCchhhhhhHHHHHHHHHHHHHHHCCCCEEEEECCCChHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhCCEEE
Confidence            555554542 3589999999999998777889988876432  1221222 22  6899999999999999999999999


Q ss_pred             eCCCCCCCCChHHHHHHHcCCcEEec-CCCCCccceeeeCcceEEECCCHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHH
Q 039338          387 NPTLRPQGLDLTLMEAMMSGKPVMAS-RFPSIKGTIVVDDEFGFMFAPNVESLHKTLEAAVSEGPMRLAQRGEACRQYAA  465 (493)
Q Consensus       387 ~ps~~~eg~~~~~~EAm~~G~PvI~s-~~~~~~~e~v~~~~~G~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~  465 (493)
                      .+|      |..++|||++|+|||++ +.++.+ +++.++ .+.+++.|++++++++.+++++ ++.+++++++...+..
T Consensus       280 ~~S------g~~~~EA~a~g~PvI~~~~~~~~~-e~~~~g-~~~lv~~d~~~i~~ai~~ll~~-~~~~~~~~~~~~~~g~  350 (365)
T TIGR00236       280 TDS------GGVQEEAPSLGKPVLVLRDTTERP-ETVEAG-TNKLVGTDKENITKAAKRLLTD-PDEYKKMSNASNPYGD  350 (365)
T ss_pred             ECC------hhHHHHHHHcCCCEEECCCCCCCh-HHHhcC-ceEEeCCCHHHHHHHHHHHHhC-hHHHHHhhhcCCCCcC
Confidence            776      34689999999999996 667666 776654 5666756999999999999998 8888888766533322


Q ss_pred             HhcCHHHHHHHHHH
Q 039338          466 SMFTANKMALAYER  479 (493)
Q Consensus       466 ~~fs~~~~~~~~~~  479 (493)
                       ..+++++++.+.+
T Consensus       351 -~~a~~ri~~~l~~  363 (365)
T TIGR00236       351 -GEASERIVEELLN  363 (365)
T ss_pred             -chHHHHHHHHHHh
Confidence             2355555555544

Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.

>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed

Probab=99.89  E-value=3.6e-22  Score=196.84  Aligned_cols=340  Identities=14%  Similarity=0.111  Sum_probs=212.5

Q ss_pred             ceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEee---cCCCC
Q 039338           83 TLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFH---EGEAD  159 (493)
Q Consensus        83 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~  159 (493)
                      .|||++++.      ..||.-.-.. ++++|.+.++++.++......+.......  ..     ....+...   .....
T Consensus         1 ~~ki~i~~G------gt~G~i~~a~-l~~~L~~~~~~~~~~~~~~~~~~~~~~~~--~~-----~~~~l~~~g~~~~~~~   66 (380)
T PRK00025          1 PLRIAIVAG------EVSGDLLGAG-LIRALKARAPNLEFVGVGGPRMQAAGCES--LF-----DMEELAVMGLVEVLPR   66 (380)
T ss_pred             CceEEEEec------CcCHHHHHHH-HHHHHHhcCCCcEEEEEccHHHHhCCCcc--cc-----CHHHhhhccHHHHHHH
Confidence            378998885      6677666665 99999998888888876543311111110  00     00001100   00001


Q ss_pred             ccccccchHHHHHHhcCCCCcEEEeCccc-hhH-----HhhhccCcEEEEeccchhhhhhhhhhhhhhcCCCCccchHhH
Q 039338          160 KWRYSKGWEQFDEENQREPFDVVHSESVA-LPH-----WLARNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFN  233 (493)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~DiI~~~~~~-~~~-----~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (493)
                      .+........+.+.+++.+||+||+++.. +..     ....++| ++...+...+.                       
T Consensus        67 ~~~~~~~~~~~~~~l~~~kPdivi~~~~~~~~~~~a~~a~~~~ip-~i~~~~~~~~~-----------------------  122 (380)
T PRK00025         67 LPRLLKIRRRLKRRLLAEPPDVFIGIDAPDFNLRLEKKLRKAGIP-TIHYVSPSVWA-----------------------  122 (380)
T ss_pred             HHHHHHHHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHCCCC-EEEEeCCchhh-----------------------
Confidence            12233455667777888999999987531 211     1223567 66554431000                       


Q ss_pred             hHHHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCCCCCCcEE
Q 039338          234 KSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLV  313 (493)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~  313 (493)
                       .......      ++.+.+|.+++.|+...+.+.+ +|.   ++.++.|++......  .......+++++++++++++
T Consensus       123 -~~~~~~~------~~~~~~d~i~~~~~~~~~~~~~-~g~---~~~~~G~p~~~~~~~--~~~~~~~~~~l~~~~~~~~i  189 (380)
T PRK00025        123 -WRQGRAF------KIAKATDHVLALFPFEAAFYDK-LGV---PVTFVGHPLADAIPL--LPDRAAARARLGLDPDARVL  189 (380)
T ss_pred             -cCchHHH------HHHHHHhhheeCCccCHHHHHh-cCC---CeEEECcCHHHhccc--ccChHHHHHHcCCCCCCCEE
Confidence             0000111      2345678999999999988876 454   367777766443211  11245677889998777555


Q ss_pred             EEEecc-cccc-cChHHHHHHHHHHHhhCCCeEEEEEeC-CCcHHHHhhh-----cCcEEEecCCCHHHHHHHHHHcCEE
Q 039338          314 LGVAGR-LVKD-KGHPLLHEAFSKLMVKYPDVYLIVAGS-GPWEQRYKDF-----GHQVLVMGSMSPAELRAFYNAIDIF  385 (493)
Q Consensus       314 i~~~Gr-~~~~-Kg~~~ll~a~~~l~~~~~~~~l~i~G~-g~~~~~~~~l-----~~~V~~~g~~~~~~~~~~~~~adv~  385 (493)
                      +++.|+ .... ++++.+++++..+.++.++++++++|+ +...+.++++     +-++.+..    +++.++|+.||++
T Consensus       190 l~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~v~~~~----~~~~~~~~~aDl~  265 (380)
T PRK00025        190 ALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDLRFVLPLVNPKRREQIEEALAEYAGLEVTLLD----GQKREAMAAADAA  265 (380)
T ss_pred             EEECCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCChhhHHHHHHHHhhcCCCCeEEEc----ccHHHHHHhCCEE
Confidence            556663 3333 457899999999988888999999976 4444444332     22344432    4899999999999


Q ss_pred             EeCCCCCCCCChHHHHHHHcCCcEEec-----------------CCCCCccceeeeCc--ceEEECC-CHHHHHHHHHHH
Q 039338          386 VNPTLRPQGLDLTLMEAMMSGKPVMAS-----------------RFPSIKGTIVVDDE--FGFMFAP-NVESLHKTLEAA  445 (493)
Q Consensus       386 v~ps~~~eg~~~~~~EAm~~G~PvI~s-----------------~~~~~~~e~v~~~~--~G~~~~~-d~~~l~~~i~~l  445 (493)
                      +.+|      |.+.+|||++|+|+|+.                 +.++++ +++.+++  .+++.+. |++++++++.++
T Consensus       266 v~~s------G~~~lEa~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~l~~~i~~l  338 (380)
T PRK00025        266 LAAS------GTVTLELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLP-NLLAGRELVPELLQEEATPEKLARALLPL  338 (380)
T ss_pred             EECc------cHHHHHHHHhCCCEEEEEccCHHHHHHHHHHHcCCeeehH-HHhcCCCcchhhcCCCCCHHHHHHHHHHH
Confidence            9976      56778999999999987                 344555 5555543  4566666 999999999999


Q ss_pred             HHcCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhc
Q 039338          446 VSEGPMRLAQRGEACRQYAASMFTANKMALAYERLFLCIKNE  487 (493)
Q Consensus       446 l~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~i~~~  487 (493)
                      ++| ++.+++|++++.+..+.. . ...++++.+++.++..+
T Consensus       339 l~~-~~~~~~~~~~~~~~~~~~-~-~~a~~~~~~~i~~~~~~  377 (380)
T PRK00025        339 LAD-GARRQALLEGFTELHQQL-R-CGADERAAQAVLELLKQ  377 (380)
T ss_pred             hcC-HHHHHHHHHHHHHHHHHh-C-CCHHHHHHHHHHHHhhh
Confidence            999 899999999886655542 1 22444444444444433

>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional

Probab=99.89  E-value=4.1e-22  Score=209.82  Aligned_cols=275  Identities=17%  Similarity=0.174  Sum_probs=194.4

Q ss_pred             CcEEEeCccc---hhHHhhhccC--cEEEEeccchhhhhhhhhhhhhhcCCCCccchHhHhHHHHHHHHHHHHHHhhccC
Q 039338          179 FDVVHSESVA---LPHWLARNVT--NLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQGVMLKVLNEIRFFNKY  253 (493)
Q Consensus       179 ~DiI~~~~~~---~~~~~~~~~p--~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (493)
                      -|+|.+|++.   ++.++....|  ++...+|-+++.   ++++..+.              ...      .-.+-+-.+
T Consensus       134 ~d~vwvhDYhl~l~p~~lr~~~~~~~igfFlH~pfP~---~~~f~~lp--------------~~~------~ll~~ll~~  190 (726)
T PRK14501        134 GDVVWVHDYQLMLLPAMLRERLPDARIGFFLHIPFPS---FEVFRLLP--------------WRE------EILEGLLGA  190 (726)
T ss_pred             CCEEEEeCchhhhHHHHHHhhCCCCcEEEEeeCCCCC---hHHHhhCC--------------ChH------HHHHHHhcC
Confidence            4899999874   4445544443  377788876542   22222221              001      111334567


Q ss_pred             CeEEEcChhHHHHHHHH----hCC-----------CCCcEEEecCCccCCCccCCcccc------hhhhhhhCCCCCCcE
Q 039338          254 AHHVAISDSCGEMLRDV----YQI-----------PSERVHVILNGINENEYGVDLSLG------QSFRSRIGIPKNASL  312 (493)
Q Consensus       254 d~ii~~S~~~~~~~~~~----~~~-----------~~~~v~vi~ngvd~~~~~~~~~~~------~~~r~~~~i~~~~~~  312 (493)
                      |.|-+-+......+.+.    .+.           ...++.++|+|||.+.|.+.....      ..+|+.+   .++ .
T Consensus       191 Dligf~t~~~~r~Fl~~~~~~l~~~~~~~~~~~~gr~~~v~v~p~GID~~~f~~~~~~~~~~~~~~~lr~~~---~~~-~  266 (726)
T PRK14501        191 DLIGFHTYDYVRHFLSSVLRVLGYETELGEIRLGGRIVRVDAFPMGIDYDKFHNSAQDPEVQEEIRRLRQDL---RGR-K  266 (726)
T ss_pred             CeEEeCCHHHHHHHHHHHHHHcCCccCCCeEEECCEEEEEEEEECeEcHHHHHHHhcCchHHHHHHHHHHHc---CCC-E
Confidence            88887777766554331    121           123689999999999987543211      1233332   233 6


Q ss_pred             EEEEecccccccChHHHHHHHHHHHhhCCC----eEEEEEeCC-----CcHH----HHhhhc-------------CcEEE
Q 039338          313 VLGVAGRLVKDKGHPLLHEAFSKLMVKYPD----VYLIVAGSG-----PWEQ----RYKDFG-------------HQVLV  366 (493)
Q Consensus       313 ~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~----~~l~i~G~g-----~~~~----~~~~l~-------------~~V~~  366 (493)
                      +|+++||+++.||+..+++|+.++.+++|+    ++|+++|.+     +..+    .+.++.             +.+.+
T Consensus       267 ~il~VgRl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~v~~~sr~~~~~~~~l~~~~~~~v~~in~~~~~~~~~pv~~~  346 (726)
T PRK14501        267 IILSIDRLDYTKGIPRRLLAFERFLEKNPEWRGKVRLVQVAVPSRTGVPQYQEMKREIDELVGRINGEFGTVDWTPIHYF  346 (726)
T ss_pred             EEEEecCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCCcchHHHHHHHHHHHHHHHHHHhhcCCCCcceEEEE
Confidence            788999999999999999999999888875    688888732     2111    222221             13457


Q ss_pred             ecCCCHHHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcC-----CcEEecCCCCCccceeeeCcceEEECC-CHHHHHH
Q 039338          367 MGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSG-----KPVMASRFPSIKGTIVVDDEFGFMFAP-NVESLHK  440 (493)
Q Consensus       367 ~g~~~~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G-----~PvI~s~~~~~~~e~v~~~~~G~~~~~-d~~~l~~  440 (493)
                      .|.++++++.++|+.||++++||.+ ||+|++++|||+||     .||++...|+.. +++    .|++++| |++++++
T Consensus       347 ~~~~~~~~l~~ly~~aDv~v~~S~~-EG~~lv~~Eama~~~~~~g~~vls~~~G~~~-~l~----~~llv~P~d~~~la~  420 (726)
T PRK14501        347 YRSLPFEELVALYRAADVALVTPLR-DGMNLVAKEYVASRTDGDGVLILSEMAGAAA-ELA----EALLVNPNDIEGIAA  420 (726)
T ss_pred             eCCCCHHHHHHHHHhccEEEecccc-cccCcccceEEEEcCCCCceEEEecccchhH-HhC----cCeEECCCCHHHHHH
Confidence            7899999999999999999999976 99999999999995     466666667666 654    4899999 9999999


Q ss_pred             HHHHHHHcCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhc
Q 039338          441 TLEAAVSEGPMRLAQRGEACRQYAASMFTANKMALAYERLFLCIKNE  487 (493)
Q Consensus       441 ~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~i~~~  487 (493)
                      +|.+++.++.+.+.+..+++++++.+ |||+..++++.+.|+++..+
T Consensus       421 ai~~~l~~~~~e~~~r~~~~~~~v~~-~~~~~w~~~~l~~l~~~~~~  466 (726)
T PRK14501        421 AIKRALEMPEEEQRERMQAMQERLRR-YDVHKWASDFLDELREAAEK  466 (726)
T ss_pred             HHHHHHcCCHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHhh
Confidence            99999998556666666789999865 99999999999999987544

>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc)

Probab=99.88  E-value=1.7e-21  Score=190.97  Aligned_cols=320  Identities=15%  Similarity=0.123  Sum_probs=202.3

Q ss_pred             EEEEEeccCCCCCCCCchHHHHHHHHHHHHhC-CCEEEEEecCCCCCCCCCC--ccccCCCCCCCCCCceEeecCCCCc-
Q 039338           85 KIAVFSRKWPISTTPGGMERHAHTLHVALARR-GHRVHIFTSPVDNINSPSI--SHQENDDGSNNKYPLLHFHEGEADK-  160 (493)
Q Consensus        85 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~-G~~V~v~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-  160 (493)
                      ||++++..      ..+.. .+..+.++|++. |+++.++.+....  ++..  .....   .......+......... 
T Consensus         1 ~i~~~~gt------r~~~~-~~~pl~~~l~~~~~~~~~~~~tg~h~--~~~~~~~~~~~---~~~~~~~~~l~~~~~~~~   68 (363)
T cd03786           1 KILVVTGT------RPEYI-KLAPLIRALKKDPGFELVLVVTGQHY--DMEMGVTFFEI---LFIIKPDYDLLLGSDSQS   68 (363)
T ss_pred             CEEEEEec------CHHHH-HHHHHHHHHhcCCCCCEEEEEeCCCC--ChhhhHHHHHh---hCCCCCCEEEecCCCCCC
Confidence            58888863      22323 477899999987 8999988876544  2111  11000   00111112222111111 


Q ss_pred             --cccccchHHHHHHhcCCCCcEEEeCccc---hhH---HhhhccCcEEEEeccchhhhhhhhhhhhhhcCCCCccchHh
Q 039338          161 --WRYSKGWEQFDEENQREPFDVVHSESVA---LPH---WLARNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAF  232 (493)
Q Consensus       161 --~~~~~~~~~~~~~~~~~~~DiI~~~~~~---~~~---~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (493)
                        .........+.+.+++.+||+||+|+..   +..   ....++| ++...||.....        . ..+        
T Consensus        69 ~~~~~~~~~~~l~~~l~~~~pDvV~~~g~~~~~~~~~~aa~~~~iP-vv~~~~g~~s~~--------~-~~~--------  130 (363)
T cd03786          69 LGAQTAGLLIGLEAVLLEEKPDLVLVLGDTNETLAAALAAFKLGIP-VAHVEAGLRSFD--------R-GMP--------  130 (363)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCEEEEeCCchHHHHHHHHHHHcCCC-EEEEecccccCC--------C-CCC--------
Confidence              1122334556666667799999999643   211   1223567 776555521100        0 000        


Q ss_pred             HhHHHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCc-cCCCccCCcccchhhhhhhCCCCCCc
Q 039338          233 NKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGI-NENEYGVDLSLGQSFRSRIGIPKNAS  311 (493)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngv-d~~~~~~~~~~~~~~r~~~~i~~~~~  311 (493)
                          .... +    ....+.+|.++++|+..++.+.+ +|++.+++.+++|++ |...+..........++.++++++ +
T Consensus       131 ----~~~~-r----~~~~~~ad~~~~~s~~~~~~l~~-~G~~~~kI~vign~v~d~~~~~~~~~~~~~~~~~~~~~~~-~  199 (363)
T cd03786         131 ----DEEN-R----HAIDKLSDLHFAPTEEARRNLLQ-EGEPPERIFVVGNTMIDALLRLLELAKKELILELLGLLPK-K  199 (363)
T ss_pred             ----chHH-H----HHHHHHhhhccCCCHHHHHHHHH-cCCCcccEEEECchHHHHHHHHHHhhccchhhhhcccCCC-C
Confidence                0000 0    02345679999999999999987 689999999999985 543322222212223456777654 4


Q ss_pred             EEEEEeccccc---ccChHHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhh----h---cCcEEEecCCCHHHHHHHHHH
Q 039338          312 LVLGVAGRLVK---DKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKD----F---GHQVLVMGSMSPAELRAFYNA  381 (493)
Q Consensus       312 ~~i~~~Gr~~~---~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~----l---~~~V~~~g~~~~~~~~~~~~~  381 (493)
                      +++++.|+...   .|+++.++++++.+.+.  ++.+++.|+++..+.+++    +   .++|.|.|....+++..+|+.
T Consensus       200 ~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~--~~~vi~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~  277 (363)
T cd03786         200 YILVTLHRVENVDDGEQLEEILEALAELAEE--DVPVVFPNHPRTRPRIREAGLEFLGHHPNVLLISPLGYLYFLLLLKN  277 (363)
T ss_pred             EEEEEeCCccccCChHHHHHHHHHHHHHHhc--CCEEEEECCCChHHHHHHHHHhhccCCCCEEEECCcCHHHHHHHHHc
Confidence            77778998774   79999999999998653  577777777665554443    3   368999998888999999999


Q ss_pred             cCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCC-CccceeeeCcceEEECCCHHHHHHHHHHHHHcCcHHHHHH
Q 039338          382 IDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPS-IKGTIVVDDEFGFMFAPNVESLHKTLEAAVSEGPMRLAQR  456 (493)
Q Consensus       382 adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~-~~~e~v~~~~~G~~~~~d~~~l~~~i~~ll~~~~~~~~~~  456 (493)
                      ||++|.+|  +   | ...|||++|+|+|+++..+ .. +.+.++ .+..+..|+++++++|.+++++ ++.+..|
T Consensus       278 ad~~v~~S--g---g-i~~Ea~~~g~PvI~~~~~~~~~-~~~~~g-~~~~~~~~~~~i~~~i~~ll~~-~~~~~~~  344 (363)
T cd03786         278 ADLVLTDS--G---G-IQEEASFLGVPVLNLRDRTERP-ETVESG-TNVLVGTDPEAILAAIEKLLSD-EFAYSLM  344 (363)
T ss_pred             CcEEEEcC--c---c-HHhhhhhcCCCEEeeCCCCccc-hhhhee-eEEecCCCHHHHHHHHHHHhcC-chhhhcC
Confidence            99999988  2   3 5799999999999997533 33 444333 3333333799999999999998 6666555

The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st

>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]

Probab=99.86  E-value=7e-18  Score=163.92  Aligned_cols=222  Identities=32%  Similarity=0.510  Sum_probs=180.4

Q ss_pred             cCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCCCCCC-cEEEEEecccccccChHHHH
Q 039338          252 KYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNA-SLVLGVAGRLVKDKGHPLLH  330 (493)
Q Consensus       252 ~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~-~~~i~~~Gr~~~~Kg~~~ll  330 (493)
                      ..+.+++.+......+....  ...++.+++++++...+...         ..++..+. ...++++|++.+.||++.++
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~i~~~g~~~~~k~~~~~i  218 (381)
T COG0438         150 LADRVIAVSPALKELLEALG--VPNKIVVIPNGIDTEKFAPA---------RIGLLPEGGKFVVLYVGRLDPEKGLDLLI  218 (381)
T ss_pred             cccEEEECCHHHHHHHHHhC--CCCCceEecCCcCHHHcCcc---------ccCCCcccCceEEEEeeccChhcCHHHHH
Confidence            47888999988866666643  23378999999998876542         01112222 26788999999999999999


Q ss_pred             HHHHHHHhhCCCeEEEEEeCCCcH-H----HHhhhc--CcEEEecCCCHHHHHHHHHHcCEEEeCCCCCCCCChHHHHHH
Q 039338          331 EAFSKLMVKYPDVYLIVAGSGPWE-Q----RYKDFG--HQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAM  403 (493)
Q Consensus       331 ~a~~~l~~~~~~~~l~i~G~g~~~-~----~~~~l~--~~V~~~g~~~~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm  403 (493)
                      +++..+.+..+++.++++|.++.. +    ...+..  ++|.+.|.++.+++..+++.+|++++||.. |++|++++|||
T Consensus       219 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~v~ps~~-e~~~~~~~Ea~  297 (381)
T COG0438         219 EAAAKLKKRGPDIKLVIVGDGPERREELEKLAKKLGLEDNVKFLGYVPDEELAELLASADVFVLPSLS-EGFGLVLLEAM  297 (381)
T ss_pred             HHHHHhhhhcCCeEEEEEcCCCccHHHHHHHHHHhCCCCcEEEecccCHHHHHHHHHhCCEEEecccc-ccchHHHHHHH
Confidence            999999988777999999988752 2    222222  789999999988898999999999999965 99999999999


Q ss_pred             HcCCcEEecCCCCCccceeeeCcceEEECC-CHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 039338          404 MSGKPVMASRFPSIKGTIVVDDEFGFMFAP-NVESLHKTLEAAVSEGPMRLAQRGEACRQYAASMFTANKMALAYERLFL  482 (493)
Q Consensus       404 ~~G~PvI~s~~~~~~~e~v~~~~~G~~~~~-d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~  482 (493)
                      ++|+|||+++.++.. +++.++.+|+++++ +++++++++..++++ .+.++.+++.+++.+.+.|+|+.+++++.+++.
T Consensus       298 a~g~pvi~~~~~~~~-e~~~~~~~g~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  375 (381)
T COG0438         298 AAGTPVIASDVGGIP-EVVEDGETGLLVPPGDVEELADALEQLLED-PELREELGEAARERVEEEFSWERIAEQLLELYE  375 (381)
T ss_pred             hcCCcEEECCCCChH-HHhcCCCceEecCCCCHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence            999999999999887 78877777887776 799999999999998 677888887677777677999999999999998


Q ss_pred             HHhhc
Q 039338          483 CIKNE  487 (493)
Q Consensus       483 ~i~~~  487 (493)
                      .....
T Consensus       376 ~~~~~  380 (381)
T COG0438         376 ELLAE  380 (381)
T ss_pred             HHHhc
Confidence            87643

>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase

Probab=99.85  E-value=1.8e-19  Score=177.04  Aligned_cols=271  Identities=15%  Similarity=0.129  Sum_probs=198.4

Q ss_pred             CcEEEeCccc---hhHHhhhccC--cEEEEeccchhhhhhhhhhhhhhcCCCCccchHhHhHHHHHHHHHHHHHHhhccC
Q 039338          179 FDVVHSESVA---LPHWLARNVT--NLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQGVMLKVLNEIRFFNKY  253 (493)
Q Consensus       179 ~DiI~~~~~~---~~~~~~~~~p--~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (493)
                      -|+|.+|++.   ++.++....|  ++..-+|-+++.   ++++..+.             .....       .+-+-.+
T Consensus       133 ~d~vWVhDYhL~llp~~LR~~~~~~~IgfFlHiPFPs---~eifr~LP-------------~r~~l-------l~glL~a  189 (487)
T TIGR02398       133 GATVWVHDYNLWLVPGYIRQLRPDLKIAFFHHTPFPS---ADVFNILP-------------WREQI-------IGSLLCC  189 (487)
T ss_pred             CCEEEEecchhhHHHHHHHHhCCCCeEEEEeeCCCCC---hHHHhhCC-------------chHHH-------HHHHhcC
Confidence            4899999873   4455554443  377777766543   22332221             11111       1334467


Q ss_pred             CeEEEcChhHHHHHHHH----hCCC--------------------------------CCcEEEecCCccCCCccCCccc-
Q 039338          254 AHHVAISDSCGEMLRDV----YQIP--------------------------------SERVHVILNGINENEYGVDLSL-  296 (493)
Q Consensus       254 d~ii~~S~~~~~~~~~~----~~~~--------------------------------~~~v~vi~ngvd~~~~~~~~~~-  296 (493)
                      |.|=+-+...++.+.+.    .|..                                .-++.++|.|||++.|...... 
T Consensus       190 DliGFqt~~y~~~Fl~~~~r~lg~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~gr~v~v~~~PiGID~~~f~~~~~~~  269 (487)
T TIGR02398       190 DYIGFHIPRYVENFVDAARGLMPLQTVSRQNVDPRFITVGTALGEERMTTALDTGNRVVKLGAHPVGTDPERIRSALAAA  269 (487)
T ss_pred             CeEEeCCHHHHHHHHHHHHHHhCCccccccccccccccccccccccccccceeECCEEEEEEEEECEecHHHHHHHhcCc
Confidence            88888887776655441    1211                                1137899999999988543211 


Q ss_pred             -----chhhhhhhCCCCCCcEEEEEecccccccChHHHHHHHHHHHhhCCC----eEEEEEeCCC---------cHHHHh
Q 039338          297 -----GQSFRSRIGIPKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPD----VYLIVAGSGP---------WEQRYK  358 (493)
Q Consensus       297 -----~~~~r~~~~i~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~----~~l~i~G~g~---------~~~~~~  358 (493)
                           ...+|++++   ++ .+|+.++|++..||+...++|+.++.+++|+    +.|+++|.+.         .+..++
T Consensus       270 ~~~~~~~~lr~~~~---~~-kiIl~VDRLDy~KGI~~kl~Afe~~L~~~Pe~~gkv~Lvqi~~psr~~v~~y~~l~~~v~  345 (487)
T TIGR02398       270 SIREMMERIRSELA---GV-KLILSAERVDYTKGILEKLNAYERLLERRPELLGKVTLVTACVPAASGMTIYDELQGQIE  345 (487)
T ss_pred             hHHHHHHHHHHHcC---Cc-eEEEEecccccccCHHHHHHHHHHHHHhCccccCceEEEEEeCCCcccchHHHHHHHHHH
Confidence                 344677776   33 5778999999999999999999999999885    6898888642         122223


Q ss_pred             hhc-------------CcEEEecCCCHHHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcCC----cEEecCCCCCccce
Q 039338          359 DFG-------------HQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGK----PVMASRFPSIKGTI  421 (493)
Q Consensus       359 ~l~-------------~~V~~~g~~~~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G~----PvI~s~~~~~~~e~  421 (493)
                      ++.             +-+.+.+.++.+++..+|+.||+++.++.+ ||++++..||++|+.    |+|.|..+|..+ .
T Consensus       346 ~~v~~IN~~fg~~~~~pv~~~~~~v~~~el~alYr~ADV~lvT~lr-DGmNLVa~Eyva~~~~~~GvLILSefaGaa~-~  423 (487)
T TIGR02398       346 QAVGRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMADVMWITPLR-DGLNLVAKEYVAAQGLLDGVLVLSEFAGAAV-E  423 (487)
T ss_pred             HHHHHHhhccCCCCCccEEEEcCCCCHHHHHHHHHhCCEEEECccc-cccCcchhhHHhhhcCCCCCEEEeccccchh-h
Confidence            221             346888999999999999999999999987 999999999999999    999999999873 3


Q ss_pred             eeeCcceEEECC-CHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 039338          422 VVDDEFGFMFAP-NVESLHKTLEAAVSEGPMRLAQRGEACRQYAASMFTANKMALAYERLFL  482 (493)
Q Consensus       422 v~~~~~G~~~~~-d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~  482 (493)
                      +   ..+++++| |+++++++|.+++.++.+++++.-++.++.+.. +|....++.+.+-+.
T Consensus       424 l---~~AllVNP~d~~~~A~ai~~AL~m~~~Er~~R~~~l~~~v~~-~d~~~W~~~fl~~l~  481 (487)
T TIGR02398       424 L---KGALLTNPYDPVRMDETIYVALAMPKAEQQARMREMFDAVNY-YDVQRWADEFLAAVS  481 (487)
T ss_pred             c---CCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhh-CCHHHHHHHHHHHhh
Confidence            3   35899999 999999999999999878888888888888877 798888888776554

Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.

>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=99.80  E-value=3.2e-16  Score=140.52  Aligned_cols=341  Identities=17%  Similarity=0.201  Sum_probs=217.5

Q ss_pred             HHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCC--C------Ccc-ccccchH----HHH
Q 039338          105 HAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGE--A------DKW-RYSKGWE----QFD  171 (493)
Q Consensus       105 ~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~------~~~-~~~~~~~----~~~  171 (493)
                      ++..=|..|++.|++|.++......   +..+.      ..  .+.+++....  +      ... ...+.+-    .+.
T Consensus        28 RMqYHA~Sla~~gf~VdliGy~~s~---p~e~l------~~--hprI~ih~m~~l~~~~~~p~~~~l~lKvf~Qfl~Ll~   96 (444)
T KOG2941|consen   28 RMQYHALSLAKLGFQVDLIGYVESI---PLEEL------LN--HPRIRIHGMPNLPFLQGGPRVLFLPLKVFWQFLSLLW   96 (444)
T ss_pred             HHHHHHHHHHHcCCeEEEEEecCCC---ChHHH------hc--CCceEEEeCCCCcccCCCchhhhhHHHHHHHHHHHHH
Confidence            4666688889999999999876653   11111      11  2223332221  1      110 1111111    112


Q ss_pred             HHhcCCCCcEEEeCcc-chhHHhh------hccCcEEEEeccchhhhhhhhhhhhhhcCCCCccchHhHhHHHHHHHHHH
Q 039338          172 EENQREPFDVVHSESV-ALPHWLA------RNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQGVMLKVL  244 (493)
Q Consensus       172 ~~~~~~~~DiI~~~~~-~~~~~~~------~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (493)
                      .+.....+|+|.+.++ +++....      ....+.++.||++.+.. .    -.+......+.     -.+.+..    
T Consensus        97 aL~~~~~~~~ilvQNPP~iPtliv~~~~~~l~~~KfiIDWHNy~Ysl-~----l~~~~g~~h~l-----V~l~~~~----  162 (444)
T KOG2941|consen   97 ALFVLRPPDIILVQNPPSIPTLIVCVLYSILTGAKFIIDWHNYGYSL-Q----LKLKLGFQHPL-----VRLVRWL----  162 (444)
T ss_pred             HHHhccCCcEEEEeCCCCCchHHHHHHHHHHhcceEEEEehhhHHHH-H----HHhhcCCCCch-----HHHHHHH----
Confidence            2223678999999876 2332211      12234999999976641 1    11111111110     1122222    


Q ss_pred             HHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCcc-----CCC----ccC----------Ccc-----cchhh
Q 039338          245 NEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGIN-----ENE----YGV----------DLS-----LGQSF  300 (493)
Q Consensus       245 ~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd-----~~~----~~~----------~~~-----~~~~~  300 (493)
                       |..+-+.||.-.|+++.+++.+.+.+|+.  ++.|++.--.     .+.    |.+          ...     +...+
T Consensus       163 -E~~fgk~a~~nLcVT~AMr~dL~qnWgi~--ra~v~YDrPps~~~~l~~~H~lf~~l~~d~~~f~ar~~q~~~~~~taf  239 (444)
T KOG2941|consen  163 -EKYFGKLADYNLCVTKAMREDLIQNWGIN--RAKVLYDRPPSKPTPLDEQHELFMKLAGDHSPFRAREPQDKALERTAF  239 (444)
T ss_pred             -HHHhhcccccchhhHHHHHHHHHHhcCCc--eeEEEecCCCCCCCchhHHHHHHhhhccccchhhhcccccchhhhhhH
Confidence             33556789999999999999999999874  4445443111     110    111          100     01111


Q ss_pred             hhhhC-----CCCCCcEEEEEecccccccChHHHHHHHHHHHhh-------CCCeEEEEEeCCCcHHHHhhhc-----Cc
Q 039338          301 RSRIG-----IPKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVK-------YPDVYLIVAGSGPWEQRYKDFG-----HQ  363 (493)
Q Consensus       301 r~~~~-----i~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~-------~~~~~l~i~G~g~~~~~~~~l~-----~~  363 (493)
                      -++..     ...+.+.+++...+..+..++..+++|+....++       .|.+-++|.|.||.++.+.+..     .+
T Consensus       240 ~~k~~s~~v~~~~~~pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~llciITGKGPlkE~Y~~~I~~~~~~~  319 (444)
T KOG2941|consen  240 TKKDASGDVQLLPERPALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLPSLLCIITGKGPLKEKYSQEIHEKNLQH  319 (444)
T ss_pred             hhhcccchhhhccCCCeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCCCcEEEEEcCCCchhHHHHHHHHHhcccc
Confidence            12221     1233456777888899999999999999855332       3788889999999988776543     45


Q ss_pred             EE-EecCCCHHHHHHHHHHcCEEEe--CCCCCCCCChHHHHHHHcCCcEEecCCCCCccceeeeCcceEEECCCHHHHHH
Q 039338          364 VL-VMGSMSPAELRAFYNAIDIFVN--PTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAPNVESLHK  440 (493)
Q Consensus       364 V~-~~g~~~~~~~~~~~~~adv~v~--ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~~d~~~l~~  440 (493)
                      |. ...++.-|+.+.+++.||+.|.  +|..+-.+|+++.+...||+||++-+...+. |+|.+++||++|+ |.++|++
T Consensus       320 v~~~tpWL~aEDYP~ll~saDlGVcLHtSSSGLDLPMKVVDMFGcglPvcA~~fkcl~-ELVkh~eNGlvF~-Ds~eLa~  397 (444)
T KOG2941|consen  320 VQVCTPWLEAEDYPKLLASADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVNFKCLD-ELVKHGENGLVFE-DSEELAE  397 (444)
T ss_pred             eeeeecccccccchhHhhccccceEeeecCcccCcchhHHHhhcCCCceeeecchhHH-HHHhcCCCceEec-cHHHHHH
Confidence            54 4577888999999999999765  5544566899999999999999999999998 9999999999999 8999999


Q ss_pred             HHHHHHHc---CcHHHHHHHHHHHHHHHHhcCHHHHHHHH
Q 039338          441 TLEAAVSE---GPMRLAQRGEACRQYAASMFTANKMALAY  477 (493)
Q Consensus       441 ~i~~ll~~---~~~~~~~~~~~~~~~~~~~fs~~~~~~~~  477 (493)
                      ++..+..+   +...+.++..++++..+  ..|+...++.
T Consensus       398 ql~~lf~~fp~~a~~l~~lkkn~~e~~e--~RW~~~W~~~  435 (444)
T KOG2941|consen  398 QLQMLFKNFPDNADELNQLKKNLREEQE--LRWDESWERT  435 (444)
T ss_pred             HHHHHHhcCCCCHHHHHHHHHhhHHHHh--hhHHHHHHHh
Confidence            99999992   27788888888888743  4666554443

>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A

Probab=99.79  E-value=7.1e-19  Score=146.38  Aligned_cols=131  Identities=35%  Similarity=0.503  Sum_probs=100.0

Q ss_pred             EEEEEecccccccChHHHHH-HHHHHHhhCCCeEEEEEeCCCcHHHHhhh-cCcEEEecCCCHHHHHHHHHHcCEEEeCC
Q 039338          312 LVLGVAGRLVKDKGHPLLHE-AFSKLMVKYPDVYLIVAGSGPWEQRYKDF-GHQVLVMGSMSPAELRAFYNAIDIFVNPT  389 (493)
Q Consensus       312 ~~i~~~Gr~~~~Kg~~~ll~-a~~~l~~~~~~~~l~i~G~g~~~~~~~~l-~~~V~~~g~~~~~~~~~~~~~adv~v~ps  389 (493)
                      ++|+++|++.+.|+++.+++ ++.++.++.|+++|+|+|.++.  .++++ .++|.++|++  +++.+++++||+++.|+
T Consensus         3 ~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~~l~i~G~~~~--~l~~~~~~~v~~~g~~--~e~~~~l~~~dv~l~p~   78 (135)
T PF13692_consen    3 LYIGYLGRIRPDKGLEELIEAALERLKEKHPDIELIIIGNGPD--ELKRLRRPNVRFHGFV--EELPEILAAADVGLIPS   78 (135)
T ss_dssp             EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTTEEEEEECESS---HHCCHHHCTEEEE-S---HHHHHHHHC-SEEEE-B
T ss_pred             ccccccccccccccccchhhhHHHHHHHHCcCEEEEEEeCCHH--HHHHhcCCCEEEcCCH--HHHHHHHHhCCEEEEEe
Confidence            67899999999999999999 9999999999999999999766  36655 6899999999  68999999999999998


Q ss_pred             CCCCCCChHHHHHHHcCCcEEecCCCCCccceeeeCcceEEECCCHHHHHHHHHHHHHc
Q 039338          390 LRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAPNVESLHKTLEAAVSE  448 (493)
Q Consensus       390 ~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~~d~~~l~~~i~~ll~~  448 (493)
                      ...++++++++|||++|+|||+++. +.. +++...+.|.++..|+++++++|.++++|
T Consensus        79 ~~~~~~~~k~~e~~~~G~pvi~~~~-~~~-~~~~~~~~~~~~~~~~~~l~~~i~~l~~d  135 (135)
T PF13692_consen   79 RFNEGFPNKLLEAMAAGKPVIASDN-GAE-GIVEEDGCGVLVANDPEELAEAIERLLND  135 (135)
T ss_dssp             SS-SCC-HHHHHHHCTT--EEEEHH-HCH-CHS---SEEEE-TT-HHHHHHHHHHHHH-
T ss_pred             eCCCcCcHHHHHHHHhCCCEEECCc-chh-hheeecCCeEEECCCHHHHHHHHHHHhcC
Confidence            6457999999999999999999998 444 55555667877744999999999999875

>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional

Probab=99.77  E-value=4.4e-17  Score=170.21  Aligned_cols=275  Identities=18%  Similarity=0.168  Sum_probs=195.0

Q ss_pred             CcEEEeCccc---hhHHhhhccC--cEEEEeccchhhhhhhhhhhhhhcCCCCccchHhHhHHHHHHHHHHHHHHhhccC
Q 039338          179 FDVVHSESVA---LPHWLARNVT--NLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQGVMLKVLNEIRFFNKY  253 (493)
Q Consensus       179 ~DiI~~~~~~---~~~~~~~~~p--~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (493)
                      =|+|.+|++.   ++.++....|  ++.+.+|-+++.   ++++..+.             .-...       .+-+-.|
T Consensus       232 gD~VWVHDYHL~LlP~~LR~~~p~~~IGfFlHiPFPs---~Eifr~LP-------------~r~el-------L~glL~a  288 (934)
T PLN03064        232 GDVVWCHDYHLMFLPKCLKEYNSNMKVGWFLHTPFPS---SEIHRTLP-------------SRSEL-------LRSVLAA  288 (934)
T ss_pred             CCEEEEecchhhHHHHHHHHhCCCCcEEEEecCCCCC---hHHHhhCC-------------cHHHH-------HHHHhcC
Confidence            3799999874   4455555444  377788876543   23333321             11111       1334578


Q ss_pred             CeEEEcChhHHHHHHHH----hCCC-----------CCcEEEecCCccCCCccCCccc------chhhhhhhCCCCCCcE
Q 039338          254 AHHVAISDSCGEMLRDV----YQIP-----------SERVHVILNGINENEYGVDLSL------GQSFRSRIGIPKNASL  312 (493)
Q Consensus       254 d~ii~~S~~~~~~~~~~----~~~~-----------~~~v~vi~ngvd~~~~~~~~~~------~~~~r~~~~i~~~~~~  312 (493)
                      |.|=+.+...+..+.+.    .|..           ..++.+.|-|||.+.|......      ...++++++   ++ .
T Consensus       289 DlIGFqT~~y~rhFl~~c~rlLg~~~~~~~v~~~Gr~v~V~~~PiGID~~~f~~~~~~~~v~~~~~~lr~~~~---g~-k  364 (934)
T PLN03064        289 DLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFIRALETPQVQQHIKELKERFA---GR-K  364 (934)
T ss_pred             CeEEeCCHHHHHHHHHHHHHHhCccccCCeEEECCEEEEEEEEeCEEcHHHHHHHhcChhHHHHHHHHHHHhC---Cc-e
Confidence            98888888777766541    2211           1236677999999888643221      234566654   33 5


Q ss_pred             EEEEecccccccChHHHHHHHHHHHhhCCCeE--EEEE-------eCCCcHHH----Hhhhc------------CcEE-E
Q 039338          313 VLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVY--LIVA-------GSGPWEQR----YKDFG------------HQVL-V  366 (493)
Q Consensus       313 ~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~--l~i~-------G~g~~~~~----~~~l~------------~~V~-~  366 (493)
                      +|+.++|++..||+...++|+.++.+++|+++  ++++       |+++..+.    +.++.            ..|. +
T Consensus       365 iIlgVDRLD~~KGI~~kL~AfE~fL~~~Pe~r~kVVLvQIa~psr~~v~eY~~l~~~V~~~V~rIN~~fg~~~w~Pv~~~  444 (934)
T PLN03064        365 VMLGVDRLDMIKGIPQKILAFEKFLEENPEWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHL  444 (934)
T ss_pred             EEEEeeccccccCHHHHHHHHHHHHHhCccccCCEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHHhhhccCCCcceEEEe
Confidence            77899999999999999999999999888754  4554       33333322    22211            1133 3


Q ss_pred             ecCCCHHHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcCC----cEEecCCCCCccceeeeCcceEEECC-CHHHHHHH
Q 039338          367 MGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGK----PVMASRFPSIKGTIVVDDEFGFMFAP-NVESLHKT  441 (493)
Q Consensus       367 ~g~~~~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G~----PvI~s~~~~~~~e~v~~~~~G~~~~~-d~~~l~~~  441 (493)
                      ...++.+++..+|+.||++|+||.+ ||++++..|||+|+.    ++|.|...|.. +.+  +..+++++| |+++++++
T Consensus       445 ~~~l~~eeL~AlY~~ADV~lvTslr-DGmNLva~Eyva~~~~~~GvLILSEfaGaa-~~L--~~~AllVNP~D~~~vA~A  520 (934)
T PLN03064        445 DRSLDFHALCALYAVTDVALVTSLR-DGMNLVSYEFVACQDSKKGVLILSEFAGAA-QSL--GAGAILVNPWNITEVAAS  520 (934)
T ss_pred             ccCCCHHHHHHHHHhCCEEEeCccc-cccCchHHHHHHhhcCCCCCeEEeCCCchH-HHh--CCceEEECCCCHHHHHHH
Confidence            4458999999999999999999987 999999999999954    44558888877 444  456899999 99999999


Q ss_pred             HHHHHHcCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHh
Q 039338          442 LEAAVSEGPMRLAQRGEACRQYAASMFTANKMALAYERLFLCIK  485 (493)
Q Consensus       442 i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~i~  485 (493)
                      |.+++..++++++++.++.++++.. +|+...++.+.+-+.+..
T Consensus       521 I~~AL~M~~~Er~~r~~~~~~~V~~-~d~~~Wa~~fl~~L~~~~  563 (934)
T PLN03064        521 IAQALNMPEEEREKRHRHNFMHVTT-HTAQEWAETFVSELNDTV  563 (934)
T ss_pred             HHHHHhCCHHHHHHHHHHHHhhccc-CCHHHHHHHHHHHHHHHH
Confidence            9999997688999999999999987 799999999877776654

>TIGR00215 lpxB lipid-A-disaccharide synthase

Probab=99.75  E-value=2.8e-16  Score=153.70  Aligned_cols=322  Identities=12%  Similarity=0.074  Sum_probs=192.3

Q ss_pred             EEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCCCccccc
Q 039338           85 KIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEADKWRYS  164 (493)
Q Consensus        85 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (493)
                      ||++.+.      +.||.-.-. .++++|.++|+++.++......+.....+..-..  .....  .-+...........
T Consensus         7 ki~i~aG------gtsGhi~pa-al~~~l~~~~~~~~~~g~gg~~m~~~g~~~~~~~--~~l~v--~G~~~~l~~~~~~~   75 (385)
T TIGR00215         7 TIALVAG------EASGDILGA-GLRQQLKEHYPNARFIGVAGPRMAAEGCEVLYSM--EELSV--MGLREVLGRLGRLL   75 (385)
T ss_pred             eEEEEeC------CccHHHHHH-HHHHHHHhcCCCcEEEEEccHHHHhCcCccccCh--HHhhh--ccHHHHHHHHHHHH
Confidence            6777764      667766556 9999999999999999876543222111110000  00000  00000111112233


Q ss_pred             cchHHHHHHhcCCCCcEEEeCcc-chhH-----HhhhccCcEEEEeccchhhhhhhhhhhhhhcCCCCccchHhHhHHHH
Q 039338          165 KGWEQFDEENQREPFDVVHSESV-ALPH-----WLARNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQG  238 (493)
Q Consensus       165 ~~~~~~~~~~~~~~~DiI~~~~~-~~~~-----~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (493)
                      ....+..+.+++.+||+|+..+. .++.     ....++| +++.+.  + ..+     .             |..... 
T Consensus        76 ~~~~~~~~~l~~~kPd~vi~~g~~~~~~~~a~aa~~~gip-~v~~i~--P-~~w-----a-------------w~~~~~-  132 (385)
T TIGR00215        76 KIRKEVVQLAKQAKPDLLVGIDAPDFNLTKELKKKDPGIK-IIYYIS--P-QVW-----A-------------WRKWRA-  132 (385)
T ss_pred             HHHHHHHHHHHhcCCCEEEEeCCCCccHHHHHHHhhCCCC-EEEEeC--C-cHh-----h-------------cCcchH-
Confidence            44556677778999999999875 2222     2223456 553321  1 000     0             000001 


Q ss_pred             HHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCCCCCCcEEEEEec
Q 039338          239 VMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVAG  318 (493)
Q Consensus       239 ~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~G  318 (493)
                              +.+.+.+|+++++++...+.+.+ +|.   ++.++.|++....... ...+...|++++++++++.++++.|
T Consensus       133 --------r~l~~~~d~v~~~~~~e~~~~~~-~g~---~~~~vGnPv~~~~~~~-~~~~~~~r~~lgl~~~~~~Ilvl~G  199 (385)
T TIGR00215       133 --------KKIEKATDFLLAILPFEKAFYQK-KNV---PCRFVGHPLLDAIPLY-KPDRKSAREKLGIDHNGETLALLPG  199 (385)
T ss_pred             --------HHHHHHHhHhhccCCCcHHHHHh-cCC---CEEEECCchhhhcccc-CCCHHHHHHHcCCCCCCCEEEEECC
Confidence                    12345688999999999988875 443   5677888874432211 1233456788999887755554555


Q ss_pred             -cccc-ccChHHHHHHHHHHHhhCCCeEEEEEe-CCCcHHHHhh----h--cCcEEEecCCCHHHHHHHHHHcCEEEeCC
Q 039338          319 -RLVK-DKGHPLLHEAFSKLMVKYPDVYLIVAG-SGPWEQRYKD----F--GHQVLVMGSMSPAELRAFYNAIDIFVNPT  389 (493)
Q Consensus       319 -r~~~-~Kg~~~ll~a~~~l~~~~~~~~l~i~G-~g~~~~~~~~----l--~~~V~~~g~~~~~~~~~~~~~adv~v~ps  389 (493)
                       |..+ .|++..+++++..+.+..|++++++.+ ++...+.+++    +  ...|.+.+.    +...+|++||++|.+|
T Consensus       200 SR~aei~k~~~~ll~a~~~l~~~~p~~~~vi~~~~~~~~~~~~~~~~~~~~~~~v~~~~~----~~~~~l~aADl~V~~S  275 (385)
T TIGR00215       200 SRGSEVEKLFPLFLKAAQLLEQQEPDLRRVLPVVNFKRRLQFEQIKAEYGPDLQLHLIDG----DARKAMFAADAALLAS  275 (385)
T ss_pred             CCHHHHHHhHHHHHHHHHHHHHhCCCeEEEEEeCCchhHHHHHHHHHHhCCCCcEEEECc----hHHHHHHhCCEEeecC
Confidence             5555 689999999999998888899887654 4333333332    2  235555543    5568999999999988


Q ss_pred             CCCCCCChHHHHHHHcCCcEEecC-CC----------------CCccceeeeCcceE-EE-CC-CHHHHHHHHHHHHHcC
Q 039338          390 LRPQGLDLTLMEAMMSGKPVMASR-FP----------------SIKGTIVVDDEFGF-MF-AP-NVESLHKTLEAAVSEG  449 (493)
Q Consensus       390 ~~~eg~~~~~~EAm~~G~PvI~s~-~~----------------~~~~e~v~~~~~G~-~~-~~-d~~~l~~~i~~ll~~~  449 (493)
                            |.+.+|+|++|+|+|... ..                +.+ .++.+.+..- +. .. +++.+++.+.++++| 
T Consensus       276 ------Gt~tlEa~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~-nil~~~~~~pel~q~~~~~~~l~~~~~~ll~~-  347 (385)
T TIGR00215       276 ------GTAALEAALIKTPMVVGYRMKPLTFLIARRLVKTDYISLP-NILANRLLVPELLQEECTPHPLAIALLLLLEN-  347 (385)
T ss_pred             ------CHHHHHHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeeecc-HHhcCCccchhhcCCCCCHHHHHHHHHHHhcC-
Confidence                  556679999999998872 11                112 2222222222 12 22 789999999999998 


Q ss_pred             c----HHHHHHHHHHHHHHH
Q 039338          450 P----MRLAQRGEACRQYAA  465 (493)
Q Consensus       450 ~----~~~~~~~~~~~~~~~  465 (493)
                      +    +.++++.+...+..+
T Consensus       348 ~~~~~~~~~~~~~~~~~~~~  367 (385)
T TIGR00215       348 GLKAYKEMHRERQFFEELRQ  367 (385)
T ss_pred             CcccHHHHHHHHHHHHHHHH
Confidence            7    777777666655444

Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA

>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1

Probab=99.74  E-value=2.1e-16  Score=158.44  Aligned_cols=209  Identities=11%  Similarity=0.106  Sum_probs=167.2

Q ss_pred             hhccCCeEEEcChhHHHHHHHHhCCC--CCcEEEecCCccCCCccCCcccchhhhhhhCCCCCCcEEEEEec--cccccc
Q 039338          249 FFNKYAHHVAISDSCGEMLRDVYQIP--SERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVAG--RLVKDK  324 (493)
Q Consensus       249 ~~~~~d~ii~~S~~~~~~~~~~~~~~--~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~G--r~~~~K  324 (493)
                      .+.++|++|+.|+...+.+.++++-.  ..++..||.+.- .. .+            |.....+..+++++  |+ +.|
T Consensus       269 ~~~~~d~iIv~T~~q~~~l~~~~~~~~~~~~v~~Ip~~~~-~~-~~------------~~s~r~~~~~I~v~idrL-~ek  333 (519)
T TIGR03713       269 SLSRADLIIVDREDIERLLEENYRENYVEFDISRITPFDT-RL-RL------------GQSQQLYETEIGFWIDGL-SDE  333 (519)
T ss_pred             ChhhcCeEEEcCHHHHHHHHHHhhhcccCCcceeeCccce-EE-ec------------ChhhcccceEEEEEcCCC-ChH
Confidence            45688999999988788777766411  134667775543 11 11            11222224566788  99 999


Q ss_pred             ChHHHHHHHHHHHhhCCCeEEEEEeCCCcH---HHH----hhh--c-----------------------------CcEEE
Q 039338          325 GHPLLHEAFSKLMVKYPDVYLIVAGSGPWE---QRY----KDF--G-----------------------------HQVLV  366 (493)
Q Consensus       325 g~~~ll~a~~~l~~~~~~~~l~i~G~g~~~---~~~----~~l--~-----------------------------~~V~~  366 (493)
                      .++.+++++.++.++.|+++|.+.|.+.+.   +.+    +++  .                             .+|.|
T Consensus       334 ~~~~~I~av~~~~~~~p~~~L~~~gy~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~f  413 (519)
T TIGR03713       334 ELQQILQQLLQYILKNPDYELKILTYNNDNDITQLLEDILEQINEEYNQDKNFFSLSEQDENQPILQTDEEQKEKERIAF  413 (519)
T ss_pred             HHHHHHHHHHHHHhhCCCeEEEEEEecCchhHHHHHHHHHHHHHhhhchhhhccccchhhhhhhcccchhhcccccEEEE
Confidence            999999999999999999999999977543   222    111  2                             58999


Q ss_pred             ecCCCHHHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCccceeeeCcceEEECCCHHHHHHHHHHHH
Q 039338          367 MGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAPNVESLHKTLEAAV  446 (493)
Q Consensus       367 ~g~~~~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~~d~~~l~~~i~~ll  446 (493)
                      .|+.+..++.+.|..+.++|.+|. .||++ +++||++.|+|+|  +. |.. ++|.++.||+++. |..+|+++|..++
T Consensus       414 ~gy~~e~dl~~~~~~arl~id~s~-~eg~~-~~ieAiS~GiPqI--ny-g~~-~~V~d~~NG~li~-d~~~l~~al~~~L  486 (519)
T TIGR03713       414 TTLTNEEDLISALDKLRLIIDLSK-EPDLY-TQISGISAGIPQI--NK-VET-DYVEHNKNGYIID-DISELLKALDYYL  486 (519)
T ss_pred             EecCCHHHHHHHHhhheEEEECCC-CCChH-HHHHHHHcCCCee--ec-CCc-eeeEcCCCcEEeC-CHHHHHHHHHHHH
Confidence            999988899999999999999995 59999 9999999999999  33 334 8999999999996 9999999999999


Q ss_pred             HcCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 039338          447 SEGPMRLAQRGEACRQYAASMFTANKMALAYERLF  481 (493)
Q Consensus       447 ~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~  481 (493)
                      .+ ++.+.++...+.+.+.+ ||-++++++|.+++
T Consensus       487 ~~-~~~wn~~~~~sy~~~~~-yS~~~i~~kW~~~~  519 (519)
T TIGR03713       487 DN-LKNWNYSLAYSIKLIDD-YSSENIIERLNELI  519 (519)
T ss_pred             hC-HHHHHHHHHHHHHHHHH-hhHHHHHHHHHhhC
Confidence            99 99999999999999977 99999999998763

This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.

>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]

Probab=99.72  E-value=1.8e-15  Score=145.22  Aligned_cols=342  Identities=13%  Similarity=0.174  Sum_probs=221.9

Q ss_pred             CCCCCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCC
Q 039338           78 QPSKFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGE  157 (493)
Q Consensus        78 ~~~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (493)
                      ++..+++||+++++.+    ..+.++..+..+.+++.+.-+||..+....+. .+...+.      +......+.-..  
T Consensus       254 ~~~~~rlRvGylS~dl----r~Havg~l~~~v~e~hDRdkfEvfay~~g~~~-~dal~~r------I~a~~~~~~~~~--  320 (620)
T COG3914         254 KRNGKRLRVGYLSSDL----RSHAVGFLLRWVFEYHDRDKFEVFAYSLGPPH-TDALQER------ISAAVEKWYPIG--  320 (620)
T ss_pred             cccccceeEEEecccc----ccchHHHHHHHHHHHhchhheEEEEEecCCCC-chhHHHH------HHHhhhheeccC--
Confidence            4567899999999987    66888899999999999988999999887433 1222222      111111111110  


Q ss_pred             CCccccccchHHHHHHhcCCCCcEEEeC-----ccchhHHhhhccCcEEEEeccchhhhhhhhhhhhhhcCCCCccchHh
Q 039338          158 ADKWRYSKGWEQFDEENQREPFDVVHSE-----SVALPHWLARNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAF  232 (493)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~DiI~~~-----~~~~~~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (493)
                        ..    ........+...++||.+--     ......+..+..| +.++|-|++.......+                
T Consensus       321 --~~----dd~e~a~~I~~d~IdILvDl~g~T~d~r~~v~A~RpAP-iqvswlGy~aT~g~p~~----------------  377 (620)
T COG3914         321 --RM----DDAEIANAIRTDGIDILVDLDGHTVDTRCQVFAHRPAP-IQVSWLGYPATTGSPNM----------------  377 (620)
T ss_pred             --Cc----CHHHHHHHHHhcCCeEEEeccCceeccchhhhhcCCCc-eEEeecccccccCCCcc----------------
Confidence              00    12455556668899998542     3344444445567 99999886532110000                


Q ss_pred             HhHHHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHh-CCCCCcEEEecCCccCCCccCCcccchhhhhhhCCCCCCc
Q 039338          233 NKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVY-QIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNAS  311 (493)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~-~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~  311 (493)
                                      =|--+|.++.+ +...+++.+.. .+|     ..+-++|-  +.+...  ..-|.++|+|++. 
T Consensus       378 ----------------DY~I~D~y~vP-p~ae~yysEkl~RLp-----~cy~p~d~--~~~v~p--~~sR~~lglp~~a-  430 (620)
T COG3914         378 ----------------DYFISDPYTVP-PTAEEYYSEKLWRLP-----QCYQPVDG--FEPVTP--PPSRAQLGLPEDA-  430 (620)
T ss_pred             ----------------eEEeeCceecC-chHHHHHHHHHHhcc-----cccCCCCC--cccCCC--CcchhhcCCCCCe-
Confidence                            01123444444 56666665532 222     12233332  222211  1347889999987 


Q ss_pred             EEEEEecccccccChHHHHHHHHHHHhhCCCeEEEEEeCCCcHH---HHhhh----c---CcEEEecCCCHHHHHHHHHH
Q 039338          312 LVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQ---RYKDF----G---HQVLVMGSMSPAELRAFYNA  381 (493)
Q Consensus       312 ~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~---~~~~l----~---~~V~~~g~~~~~~~~~~~~~  381 (493)
                      ++++++++.  .|-...+++.+.++.+..|+-.|++.|.|+..+   .++++    +   ++++|.+..+.++..+.|.-
T Consensus       431 vVf~c~~n~--~K~~pev~~~wmqIL~~vP~Svl~L~~~~~~~~~~~~l~~la~~~Gv~~eRL~f~p~~~~~~h~a~~~i  508 (620)
T COG3914         431 VVFCCFNNY--FKITPEVFALWMQILSAVPNSVLLLKAGGDDAEINARLRDLAEREGVDSERLRFLPPAPNEDHRARYGI  508 (620)
T ss_pred             EEEEecCCc--ccCCHHHHHHHHHHHHhCCCcEEEEecCCCcHHHHHHHHHHHHHcCCChhheeecCCCCCHHHHHhhch
Confidence            777776654  588999999999999999999999998865443   23332    2   89999999999999999999


Q ss_pred             cCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCc----cceeeeCcceEEECCCHHHHHHHHHHHHHcCcHHHHHHH
Q 039338          382 IDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIK----GTIVVDDEFGFMFAPNVESLHKTLEAAVSEGPMRLAQRG  457 (493)
Q Consensus       382 adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~----~e~v~~~~~G~~~~~d~~~l~~~i~~ll~~~~~~~~~~~  457 (493)
                      ||+++.+.  +.|-++|.+||+++|+|||+-......    ..++..-+.--++..+.+++++.-..+-.| ...+++.+
T Consensus       509 ADlvLDTy--PY~g~TTa~daLwm~vPVlT~~G~~FasR~~~si~~~agi~e~vA~s~~dYV~~av~~g~d-ral~q~~r  585 (620)
T COG3914         509 ADLVLDTY--PYGGHTTASDALWMGVPVLTRVGEQFASRNGASIATNAGIPELVADSRADYVEKAVAFGSD-RALRQQVR  585 (620)
T ss_pred             hheeeecc--cCCCccchHHHHHhcCceeeeccHHHHHhhhHHHHHhcCCchhhcCCHHHHHHHHHHhccc-HHHHHhhH
Confidence            99999866  567789999999999999975311110    012222111112222668888888888777 66666666


Q ss_pred             HHHHHHHHH--hcCHHHHHHHHHHHHHHHhhc
Q 039338          458 EACRQYAAS--MFTANKMALAYERLFLCIKNE  487 (493)
Q Consensus       458 ~~~~~~~~~--~fs~~~~~~~~~~~~~~i~~~  487 (493)
                      ..-++....  -|+.+.++++++.+|.+|.++
T Consensus       586 ~~l~~~r~tspL~d~~~far~le~~y~~M~~~  617 (620)
T COG3914         586 AELKRSRQTSPLFDPKAFARKLETLYWGMWSE  617 (620)
T ss_pred             HHHHhccccCcccCHHHHHHHHHHHHHHHHHh
Confidence            655555544  489999999999999998764

>TIGR02094 more_P_ylases alpha-glucan phosphorylases

Probab=99.69  E-value=8.5e-15  Score=148.59  Aligned_cols=231  Identities=19%  Similarity=0.235  Sum_probs=169.1

Q ss_pred             HhhccCCeEEEcChhHHHHHHHHhCC-----C--CCcEEEecCCccCCCccCCccc------------------------
Q 039338          248 RFFNKYAHHVAISDSCGEMLRDVYQI-----P--SERVHVILNGINENEYGVDLSL------------------------  296 (493)
Q Consensus       248 ~~~~~~d~ii~~S~~~~~~~~~~~~~-----~--~~~v~vi~ngvd~~~~~~~~~~------------------------  296 (493)
                      ..+..++.+.+||+...+...+.++.     +  ..++.-|-||||...|.+....                        
T Consensus       258 lai~~S~~vngVS~lh~~v~~~l~~~l~~~~~~~~~~i~gItNGId~~~W~~~~~~~l~~~y~~~~w~~~~~~~~~~~~~  337 (601)
T TIGR02094       258 LALRLSRIANGVSKLHGEVSRKMWQFLYPGYEEEEVPIGYVTNGVHNPTWVAPELRDLYERYLGENWRELLADEELWEAI  337 (601)
T ss_pred             HHHHhCCeeeeecHHHHHHHHHHHHhhhhhcccccCCccceeCCccccccCCHHHHHHHHHhCCcchhccchhhhhhhhc
Confidence            34667899999999888744432221     1  2358889999999887653211                        


Q ss_pred             ---------------chhhhh----h-----------------hC--CCCCCcEEEEEecccccccChHHHHHHHHHHHh
Q 039338          297 ---------------GQSFRS----R-----------------IG--IPKNASLVLGVAGRLVKDKGHPLLHEAFSKLMV  338 (493)
Q Consensus       297 ---------------~~~~r~----~-----------------~~--i~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~l~~  338 (493)
                                     +..+.+    +                 +|  ++++. +++++++|+..+||.+++++++.++.+
T Consensus       338 ~~~~~~~l~~~K~~~K~~L~~~v~~~~~~~~~~~g~~~~~~~~~gl~~dpd~-~~ig~v~Rl~~yKr~dLil~~i~~l~~  416 (601)
T TIGR02094       338 DDIPDEELWEVHLKLKARLIDYIRRRLRERWLRRGADAAILMATDRFLDPDV-LTIGFARRFATYKRADLIFRDLERLAR  416 (601)
T ss_pred             ccccHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcchhhhhhccccCCCC-cEEEEEEcchhhhhHHHHHHHHHHHHH
Confidence                           001111    1                 11  23333 789999999999999999999988874


Q ss_pred             --hC--CCeEEEEEeCCCc--------HHHHhhh------cCcEEEecCCCHHHHHHHHHHcCEEEe-CCCCCCCCChHH
Q 039338          339 --KY--PDVYLIVAGSGPW--------EQRYKDF------GHQVLVMGSMSPAELRAFYNAIDIFVN-PTLRPQGLDLTL  399 (493)
Q Consensus       339 --~~--~~~~l~i~G~g~~--------~~~~~~l------~~~V~~~g~~~~~~~~~~~~~adv~v~-ps~~~eg~~~~~  399 (493)
                        ..  .++++++.|.+..        .+.+.++      .++|.|+...+.+--..+++.||++++ ||.-.|.+|++-
T Consensus       417 i~~~~~~pvq~V~~Gka~p~d~~gk~~i~~i~~la~~~~~~~kv~f~~~Yd~~lA~~i~aG~Dv~L~~Psr~~EacGtsq  496 (601)
T TIGR02094       417 ILNNPERPVQIVFAGKAHPADGEGKEIIQRIVEFSKRPEFRGRIVFLENYDINLARYLVSGVDVWLNNPRRPLEASGTSG  496 (601)
T ss_pred             HhhCCCCCeEEEEEEecCcccchHHHHHHHHHHHHhcccCCCCEEEEcCCCHHHHHHHhhhheeEEeCCCCCcCCchHHH
Confidence              21  3699999998752        2222222      268999888887777789999999999 986359999999


Q ss_pred             HHHHHcCCcEEecCCCCCccceeeeCcceEEEC------------C-CHHHHHHHHHHHHH----cC-----cHHHHHHH
Q 039338          400 MEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFA------------P-NVESLHKTLEAAVS----EG-----PMRLAQRG  457 (493)
Q Consensus       400 ~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~------------~-d~~~l~~~i~~ll~----~~-----~~~~~~~~  457 (493)
                      +-||..|.+.+++-.|... |.. ++.+||.|.            . |.++|-++|++.+.    +.     +..+.++.
T Consensus       497 Mka~~nGgL~~sv~DG~~~-E~~-~~~nGf~f~~~~~~~~~~~~d~~da~~l~~~L~~ai~~~yy~~~~~~~p~~W~~~~  574 (601)
T TIGR02094       497 MKAAMNGVLNLSILDGWWG-EGY-DGDNGWAIGDGEEYDDEEEQDRLDAEALYDLLENEVIPLYYDRDEKGIPADWVEMM  574 (601)
T ss_pred             HHHHHcCCceeecccCccc-ccC-CCCcEEEECCCccccccccccCCCHHHHHHHHHHHHHHHHhcCCcccCcHHHHHHH
Confidence            9999999999999877776 544 678999998            4 89999999977662    21     23366666


Q ss_pred             HHHHHHHHHhcCHHHHHHHHHHHH
Q 039338          458 EACRQYAASMFTANKMALAYERLF  481 (493)
Q Consensus       458 ~~~~~~~~~~fs~~~~~~~~~~~~  481 (493)
                      +++.......|||++++++|.++|
T Consensus       575 k~am~~~~~~fsw~r~a~~Y~~~y  598 (601)
T TIGR02094       575 KESIATIAPRFSTNRMVREYVDKF  598 (601)
T ss_pred             HHHHhccCCCCCHHHHHHHHHHHh
Confidence            666555544799999999999987

This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343.

>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]

Probab=99.66  E-value=3.9e-14  Score=134.90  Aligned_cols=323  Identities=17%  Similarity=0.147  Sum_probs=194.9

Q ss_pred             eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCE-EEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCC----
Q 039338           84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHR-VHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEA----  158 (493)
Q Consensus        84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~-V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  158 (493)
                      |+|++...      ..||+-.-...++++|.++|++ |.++......  +.....        .....++.+....    
T Consensus         1 ~~ivl~~g------GTGGHv~pAlAl~~~l~~~g~~~v~~~~~~~~~--e~~l~~--------~~~~~~~~I~~~~~~~~   64 (357)
T COG0707           1 KKIVLTAG------GTGGHVFPALALAEELAKRGWEQVIVLGTGDGL--EAFLVK--------QYGIEFELIPSGGLRRK   64 (357)
T ss_pred             CeEEEEeC------CCccchhHHHHHHHHHHhhCccEEEEecccccc--eeeecc--------ccCceEEEEeccccccc
Confidence            34555543      7799999999999999999995 6665443333  111111        1122233222211    


Q ss_pred             -------CccccccchHHHHHHhcCCCCcEEEeCcc--chhH---HhhhccCcEEEEeccchhhhhhhhhhhhhhcCCCC
Q 039338          159 -------DKWRYSKGWEQFDEENQREPFDVVHSESV--ALPH---WLARNVTNLAVSWHGIALESLQSGIFQDLTRKPLE  226 (493)
Q Consensus       159 -------~~~~~~~~~~~~~~~~~~~~~DiI~~~~~--~~~~---~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~  226 (493)
                             ..+.......+.++.+++.+||+|+..+.  ..+.   ....++| ++....+....                
T Consensus        65 ~~~~~~~~~~~~~~~~~~a~~il~~~kPd~vig~Ggyvs~P~~~Aa~~~~iP-v~ihEqn~~~G----------------  127 (357)
T COG0707          65 GSLKLLKAPFKLLKGVLQARKILKKLKPDVVIGTGGYVSGPVGIAAKLLGIP-VIIHEQNAVPG----------------  127 (357)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEecCCccccHHHHHHHhCCCC-EEEEecCCCcc----------------
Confidence                   11223334455667778999999998653  2333   3334566 55554442211                


Q ss_pred             ccchHhHhHHHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCC
Q 039338          227 PMSLAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGI  306 (493)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i  306 (493)
                              ...+.         ..+.++.|.+.-+.    . . -+.+.+++.+..|++..+... .+.  ...+.... 
T Consensus       128 --------~ank~---------~~~~a~~V~~~f~~----~-~-~~~~~~~~~~tG~Pvr~~~~~-~~~--~~~~~~~~-  180 (357)
T COG0707         128 --------LANKI---------LSKFAKKVASAFPK----L-E-AGVKPENVVVTGIPVRPEFEE-LPA--AEVRKDGR-  180 (357)
T ss_pred             --------hhHHH---------hHHhhceeeecccc----c-c-ccCCCCceEEecCcccHHhhc-cch--hhhhhhcc-
Confidence                    11111         12233443332222    1 1 234567899999999887665 222  12222211 


Q ss_pred             CCCCcEEEEEecccccccChHHHHHHHHHHHhhCCCeEEEE-EeCCCcHHHHhhhc-Cc-EEEecCCCHHHHHHHHHHcC
Q 039338          307 PKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIV-AGSGPWEQRYKDFG-HQ-VLVMGSMSPAELRAFYNAID  383 (493)
Q Consensus       307 ~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i-~G~g~~~~~~~~l~-~~-V~~~g~~~~~~~~~~~~~ad  383 (493)
                       .+.+.++++-|+.+..+-.+.+.++...+.+   +++++. +|.+...+....+. .+ +.+.++.  +++..+|++||
T Consensus       181 -~~~~~ilV~GGS~Ga~~ln~~v~~~~~~l~~---~~~v~~~~G~~~~~~~~~~~~~~~~~~v~~f~--~dm~~~~~~AD  254 (357)
T COG0707         181 -LDKKTILVTGGSQGAKALNDLVPEALAKLAN---RIQVIHQTGKNDLEELKSAYNELGVVRVLPFI--DDMAALLAAAD  254 (357)
T ss_pred             -CCCcEEEEECCcchhHHHHHHHHHHHHHhhh---CeEEEEEcCcchHHHHHHHHhhcCcEEEeeHH--hhHHHHHHhcc
Confidence             1454666666776665555555566666643   456554 45544233333332 12 8999998  68999999999


Q ss_pred             EEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCcc-------ceeeeCcceEEECC---CHHHHHHHHHHHHHcCcHHH
Q 039338          384 IFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKG-------TIVVDDEFGFMFAP---NVESLHKTLEAAVSEGPMRL  453 (493)
Q Consensus       384 v~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~-------e~v~~~~~G~~~~~---d~~~l~~~i~~ll~~~~~~~  453 (493)
                      ++|.   + .| ++|+.|..++|+|+|.-..+...+       ..+++.+.|.+++.   +++.+.+.|.+++++ ++.+
T Consensus       255 LvIs---R-aG-a~Ti~E~~a~g~P~IliP~p~~~~~~Q~~NA~~l~~~gaa~~i~~~~lt~~~l~~~i~~l~~~-~~~l  328 (357)
T COG0707         255 LVIS---R-AG-ALTIAELLALGVPAILVPYPPGADGHQEYNAKFLEKAGAALVIRQSELTPEKLAELILRLLSN-PEKL  328 (357)
T ss_pred             EEEe---C-Cc-ccHHHHHHHhCCCEEEeCCCCCccchHHHHHHHHHhCCCEEEeccccCCHHHHHHHHHHHhcC-HHHH
Confidence            9995   3 23 579999999999999987665521       23555667888876   589999999999999 9999


Q ss_pred             HHHHHHHHHHHHHhcCHHHHHHHHHH
Q 039338          454 AQRGEACRQYAASMFTANKMALAYER  479 (493)
Q Consensus       454 ~~~~~~~~~~~~~~fs~~~~~~~~~~  479 (493)
                      ++|.+++++....+ ..+++++.++.
T Consensus       329 ~~m~~~a~~~~~p~-aa~~i~~~~~~  353 (357)
T COG0707         329 KAMAENAKKLGKPD-AAERIADLLLA  353 (357)
T ss_pred             HHHHHHHHhcCCCC-HHHHHHHHHHH
Confidence            99999998876653 44555554443

>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A

Probab=99.64  E-value=1.8e-15  Score=131.96  Aligned_cols=174  Identities=23%  Similarity=0.255  Sum_probs=95.3

Q ss_pred             EEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCCCcccccc
Q 039338           86 IAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEADKWRYSK  165 (493)
Q Consensus        86 Il~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (493)
                      |+++...+   ...||+++++.+|+++|+++||+|++++.....  .......      ....  ...............
T Consensus         1 ili~~~~~---~~~GG~e~~~~~l~~~l~~~G~~v~v~~~~~~~--~~~~~~~------~~~~--~~~~~~~~~~~~~~~   67 (177)
T PF13439_consen    1 ILITNIFL---PNIGGAERVVLNLARALAKRGHEVTVVSPGVKD--PIEEELV------KIFV--KIPYPIRKRFLRSFF   67 (177)
T ss_dssp             -EEECC-T---TSSSHHHHHHHHHHHHHHHTT-EEEEEESS-TT--S-SSTEE------EE-----TT-SSTSS--HHHH
T ss_pred             CEEEEecC---CCCChHHHHHHHHHHHHHHCCCEEEEEEcCCCc--cchhhcc------ceee--eeecccccccchhHH
Confidence            45566554   378999999999999999999999999887666  1111100      0000  000000111222233


Q ss_pred             chHHHHHHhcCCCCcEEEeCccchh---HHhhhccCcEEEEeccchhhhhhhhhhhhhhcCCCCccchHhHhHHHHHHHH
Q 039338          166 GWEQFDEENQREPFDVVHSESVALP---HWLARNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQGVMLK  242 (493)
Q Consensus       166 ~~~~~~~~~~~~~~DiI~~~~~~~~---~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (493)
                      ....+.+.+++.+||+||+|.....   .......| .+.+.|+.+..       .......         ......+..
T Consensus        68 ~~~~~~~~i~~~~~DiVh~~~~~~~~~~~~~~~~~~-~v~~~H~~~~~-------~~~~~~~---------~~~~~~~~~  130 (177)
T PF13439_consen   68 FMRRLRRLIKKEKPDIVHIHGPPAFWIALLACRKVP-IVYTIHGPYFE-------RRFLKSK---------LSPYSYLNF  130 (177)
T ss_dssp             HHHHHHHHHHHHT-SEEECCTTHCCCHHHHHHHCSC-EEEEE-HHH---------HHTTTTS---------CCCHHHHHH
T ss_pred             HHHHHHHHHHHcCCCeEEecccchhHHHHHhccCCC-EEEEeCCCccc-------ccccccc---------cchhhhhhh
Confidence            3456666777779999999975322   11222567 99999987632       0000000         011111111


Q ss_pred             HHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCcc
Q 039338          243 VLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYG  291 (493)
Q Consensus       243 ~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~  291 (493)
                      .. +..+++.+|.++++|+..++.+.+ +|++++++.||+||+|.+.|.
T Consensus       131 ~~-~~~~~~~~~~ii~vS~~~~~~l~~-~~~~~~ki~vI~ngid~~~F~  177 (177)
T PF13439_consen  131 RI-ERKLYKKADRIIAVSESTKDELIK-FGIPPEKIHVIYNGIDTDRFR  177 (177)
T ss_dssp             CT-THHHHCCSSEEEESSHHHHHHHHH-HT--SS-EEE----B-CCCH-
T ss_pred             hh-hhhHHhcCCEEEEECHHHHHHHHH-hCCcccCCEEEECCccHHHcC
Confidence            11 224478999999999999999999 999999999999999998763

>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A

Probab=99.63  E-value=1.4e-14  Score=140.27  Aligned_cols=180  Identities=18%  Similarity=0.260  Sum_probs=123.7

Q ss_pred             hhhhhhCCCCCCcEEEEEecccccccChHHHHHHHHHHHhhCCCeEEEEEeCCCcH-HH----Hhhhc---CcEEEecCC
Q 039338          299 SFRSRIGIPKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWE-QR----YKDFG---HQVLVMGSM  370 (493)
Q Consensus       299 ~~r~~~~i~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~-~~----~~~l~---~~V~~~g~~  370 (493)
                      ..|+.+|+|++. ++|++++++.  |-.+..+++|.++.++.|+.+|++...+... +.    +++.+   +++.|.+..
T Consensus       274 ~~R~~~gLp~d~-vvF~~fn~~~--KI~p~~l~~W~~IL~~vP~S~L~L~~~~~~~~~~l~~~~~~~Gv~~~Ri~f~~~~  350 (468)
T PF13844_consen  274 TTRAQYGLPEDA-VVFGSFNNLF--KISPETLDLWARILKAVPNSRLWLLRFPASGEARLRRRFAAHGVDPDRIIFSPVA  350 (468)
T ss_dssp             EETGGGT--SSS-EEEEE-S-GG--G--HHHHHHHHHHHHHSTTEEEEEEETSTTHHHHHHHHHHHTTS-GGGEEEEE--
T ss_pred             cCHHHcCCCCCc-eEEEecCccc--cCCHHHHHHHHHHHHhCCCcEEEEeeCCHHHHHHHHHHHHHcCCChhhEEEcCCC
Confidence            467899999887 8888877765  8889999999999999999999887654322 22    22333   889999999


Q ss_pred             CHHHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCccc----eeeeCcceEEECCCHHHHHHHHHHHH
Q 039338          371 SPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGT----IVVDDEFGFMFAPNVESLHKTLEAAV  446 (493)
Q Consensus       371 ~~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e----~v~~~~~G~~~~~d~~~l~~~i~~ll  446 (493)
                      +.++....|+.+|+++.+.  +.+-+++.+||+++|+|||+.......+.    ++..-+..-++..|.+++.+...++.
T Consensus       351 ~~~ehl~~~~~~DI~LDT~--p~nG~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~lGl~ElIA~s~~eYv~~Av~La  428 (468)
T PF13844_consen  351 PREEHLRRYQLADICLDTF--PYNGGTTTLDALWMGVPVVTLPGETMASRVGASILRALGLPELIADSEEEYVEIAVRLA  428 (468)
T ss_dssp             -HHHHHHHGGG-SEEE--S--SS--SHHHHHHHHHT--EEB---SSGGGSHHHHHHHHHT-GGGB-SSHHHHHHHHHHHH
T ss_pred             CHHHHHHHhhhCCEEeeCC--CCCCcHHHHHHHHcCCCEEeccCCCchhHHHHHHHHHcCCchhcCCCHHHHHHHHHHHh
Confidence            9999999999999999986  35668999999999999999864443321    11111111123338899999999999


Q ss_pred             HcCcHHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHH
Q 039338          447 SEGPMRLAQRGEACRQYAASM--FTANKMALAYERLFLCI  484 (493)
Q Consensus       447 ~~~~~~~~~~~~~~~~~~~~~--fs~~~~~~~~~~~~~~i  484 (493)
                      .| ++.+++++++.++...+.  |+....++++++.|++|
T Consensus       429 ~D-~~~l~~lR~~Lr~~~~~SpLfd~~~~ar~lE~a~~~m  467 (468)
T PF13844_consen  429 TD-PERLRALRAKLRDRRSKSPLFDPKRFARNLEAAYRQM  467 (468)
T ss_dssp             H--HHHHHHHHHHHHHHHHHSGGG-HHHHHHHHHHHHHHH
T ss_pred             CC-HHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHh
Confidence            99 999999999998877554  99999999999999986

>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed

Probab=99.62  E-value=5.5e-13  Score=128.72  Aligned_cols=302  Identities=15%  Similarity=0.162  Sum_probs=174.3

Q ss_pred             eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCC-CC--c
Q 039338           84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGE-AD--K  160 (493)
Q Consensus        84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~  160 (493)
                      ||.++++.     ...||+-.-...++++|.++||+|.+++.....  +..  ..+     ..+.+...+.... .+  .
T Consensus         1 ~~~i~~~~-----GGTGGHi~Pala~a~~l~~~g~~v~~vg~~~~~--e~~--l~~-----~~g~~~~~~~~~~l~~~~~   66 (352)
T PRK12446          1 MKKIVFTG-----GGSAGHVTPNLAIIPYLKEDNWDISYIGSHQGI--EKT--IIE-----KENIPYYSISSGKLRRYFD   66 (352)
T ss_pred             CCeEEEEc-----CCcHHHHHHHHHHHHHHHhCCCEEEEEECCCcc--ccc--cCc-----ccCCcEEEEeccCcCCCch
Confidence            55445543     377898888999999999999999999866554  111  100     1111111111111 01  1


Q ss_pred             c-------ccccchHHHHHHhcCCCCcEEEeCccc--hhHH---hhhccCcEEEEeccchhhhhhhhhhhhhhcCCCCcc
Q 039338          161 W-------RYSKGWEQFDEENQREPFDVVHSESVA--LPHW---LARNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPM  228 (493)
Q Consensus       161 ~-------~~~~~~~~~~~~~~~~~~DiI~~~~~~--~~~~---~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~  228 (493)
                      +       .......+..+++++.+||+||.++..  ++..   ...++| +  .+|.....                  
T Consensus        67 ~~~~~~~~~~~~~~~~~~~i~~~~kPdvvi~~Ggy~s~p~~~aa~~~~~p-~--~i~e~n~~------------------  125 (352)
T PRK12446         67 LKNIKDPFLVMKGVMDAYVRIRKLKPDVIFSKGGFVSVPVVIGGWLNRVP-V--LLHESDMT------------------  125 (352)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCchhhHHHHHHHHHcCCC-E--EEECCCCC------------------
Confidence            1       112233345566789999999998742  2233   333455 3  33431100                  


Q ss_pred             chHhHhHHHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCCCC
Q 039338          229 SLAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPK  308 (493)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~  308 (493)
                              .....+     -+.+.++.+.+.=+...    +  +++.+++.+..+++..+....   .....++.+++++
T Consensus       126 --------~g~~nr-----~~~~~a~~v~~~f~~~~----~--~~~~~k~~~tG~Pvr~~~~~~---~~~~~~~~~~l~~  183 (352)
T PRK12446        126 --------PGLANK-----IALRFASKIFVTFEEAA----K--HLPKEKVIYTGSPVREEVLKG---NREKGLAFLGFSR  183 (352)
T ss_pred             --------ccHHHH-----HHHHhhCEEEEEccchh----h--hCCCCCeEEECCcCCcccccc---cchHHHHhcCCCC
Confidence                    000111     12334555544322221    2  235578889999988765422   1335566788888


Q ss_pred             CCcEEEEEecccccccChHHHHHHHHHHHhhCCCeEEEE-EeCCCcHHHHhhhcCcEEEecCCCHHHHHHHHHHcCEEEe
Q 039338          309 NASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIV-AGSGPWEQRYKDFGHQVLVMGSMSPAELRAFYNAIDIFVN  387 (493)
Q Consensus       309 ~~~~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i-~G~g~~~~~~~~l~~~V~~~g~~~~~~~~~~~~~adv~v~  387 (493)
                      +++.++++.|+.....=.+.+.+++..+.+   ++++++ +|.....+..... .++...+++. +++.++|++||++|.
T Consensus       184 ~~~~iLv~GGS~Ga~~in~~~~~~l~~l~~---~~~vv~~~G~~~~~~~~~~~-~~~~~~~f~~-~~m~~~~~~adlvIs  258 (352)
T PRK12446        184 KKPVITIMGGSLGAKKINETVREALPELLL---KYQIVHLCGKGNLDDSLQNK-EGYRQFEYVH-GELPDILAITDFVIS  258 (352)
T ss_pred             CCcEEEEECCccchHHHHHHHHHHHHhhcc---CcEEEEEeCCchHHHHHhhc-CCcEEecchh-hhHHHHHHhCCEEEE
Confidence            876777777776643323444455555532   355544 5654333323222 3445567762 579999999999995


Q ss_pred             CCCCCCCCChHHHHHHHcCCcEEecCCCCC----cc----ceeeeCcceEEECC---CHHHHHHHHHHHHHcCcHHH
Q 039338          388 PTLRPQGLDLTLMEAMMSGKPVMASRFPSI----KG----TIVVDDEFGFMFAP---NVESLHKTLEAAVSEGPMRL  453 (493)
Q Consensus       388 ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~----~~----e~v~~~~~G~~~~~---d~~~l~~~i~~ll~~~~~~~  453 (493)
                         +  +-++++.|++++|+|.|.......    .+    +.+.+.+.|..+..   +++.+.+++.++++| ++.+
T Consensus       259 ---r--~G~~t~~E~~~~g~P~I~iP~~~~~~~~~Q~~Na~~l~~~g~~~~l~~~~~~~~~l~~~l~~ll~~-~~~~  329 (352)
T PRK12446        259 ---R--AGSNAIFEFLTLQKPMLLIPLSKFASRGDQILNAESFERQGYASVLYEEDVTVNSLIKHVEELSHN-NEKY  329 (352)
T ss_pred             ---C--CChhHHHHHHHcCCCEEEEcCCCCCCCchHHHHHHHHHHCCCEEEcchhcCCHHHHHHHHHHHHcC-HHHH
Confidence               2  346799999999999999865321    11    13444566666643   789999999999987 6554

>TIGR02919 accessory Sec system glycosyltransferase GtfB

Probab=99.55  E-value=1.7e-12  Score=127.20  Aligned_cols=186  Identities=10%  Similarity=0.122  Sum_probs=139.0

Q ss_pred             ccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCCCCCCcEEEEEecccccccChHHHH
Q 039338          251 NKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVAGRLVKDKGHPLLH  330 (493)
Q Consensus       251 ~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Gr~~~~Kg~~~ll  330 (493)
                      .+.|+||+.++...+.+.++++ +..++.++|-|+-..   ....            ...+..+++++.       +..+
T Consensus       238 ~~~~~iIv~T~~q~~di~~r~~-~~~~~~~ip~g~i~~---~~~~------------~r~~~~~l~~t~-------s~~I  294 (438)
T TIGR02919       238 TRNKKIIIPNKNEYEKIKELLD-NEYQEQISQLGYLYP---FKKD------------NKYRKQALILTN-------SDQI  294 (438)
T ss_pred             cccCeEEeCCHHHHHHHHHHhC-cccCceEEEEEEEEe---eccc------------cCCcccEEEECC-------HHHH
Confidence            6789999999988888888775 356778888887522   1111            011123445552       8899


Q ss_pred             HHHHHHHhhCCCeEEEEEeCCCc-HHHHhhhc--CcEEEecCCCHHHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcCC
Q 039338          331 EAFSKLMVKYPDVYLIVAGSGPW-EQRYKDFG--HQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGK  407 (493)
Q Consensus       331 ~a~~~l~~~~~~~~l~i~G~g~~-~~~~~~l~--~~V~~~g~~~~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G~  407 (493)
                      +++..+.++.|+++|.| |.+.. ...+.++.  ++|+..+.+...++.++|..||+++..+. +|++++++.||+..|+
T Consensus       295 ~~i~~Lv~~lPd~~f~I-ga~te~s~kL~~L~~y~nvvly~~~~~~~l~~ly~~~dlyLdin~-~e~~~~al~eA~~~G~  372 (438)
T TIGR02919       295 EHLEEIVQALPDYHFHI-AALTEMSSKLMSLDKYDNVKLYPNITTQKIQELYQTCDIYLDINH-GNEILNAVRRAFEYNL  372 (438)
T ss_pred             HHHHHHHHhCCCcEEEE-EecCcccHHHHHHHhcCCcEEECCcChHHHHHHHHhccEEEEccc-cccHHHHHHHHHHcCC
Confidence            99999999999999999 76544 44454433  56555555555789999999999999994 6999999999999999


Q ss_pred             cEEecCCCCCccceeeeCcceEEECC-CHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHH
Q 039338          408 PVMASRFPSIKGTIVVDDEFGFMFAP-NVESLHKTLEAAVSEGPMRLAQRGEACRQYAA  465 (493)
Q Consensus       408 PvI~s~~~~~~~e~v~~~~~G~~~~~-d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~  465 (493)
                      ||++.+....+.+++.+   |.+++. ++++++++|.+++.+ ++.+++.-..-++.+-
T Consensus       373 pI~afd~t~~~~~~i~~---g~l~~~~~~~~m~~~i~~lL~d-~~~~~~~~~~q~~~a~  427 (438)
T TIGR02919       373 LILGFEETAHNRDFIAS---ENIFEHNEVDQLISKLKDLLND-PNQFRELLEQQREHAN  427 (438)
T ss_pred             cEEEEecccCCcccccC---CceecCCCHHHHHHHHHHHhcC-HHHHHHHHHHHHHHhc
Confidence            99999877555456655   889998 999999999999999 7666655555555443

Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.

>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3

Probab=99.50  E-value=3.7e-12  Score=124.80  Aligned_cols=243  Identities=16%  Similarity=0.194  Sum_probs=145.7

Q ss_pred             HHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCccc-------chh----hhh----hhC
Q 039338          241 LKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSL-------GQS----FRS----RIG  305 (493)
Q Consensus       241 ~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~-------~~~----~r~----~~~  305 (493)
                      .+...|+.....||.+.++|+-.+......++-.  .=.|+|||++.+.+....+-       +++    ++.    .+.
T Consensus       210 ~k~~iEraaA~~AdvFTTVSeITa~Ea~~LL~r~--pDvV~pNGl~v~~~~~~~efqnl~~~~k~ki~~fv~~~f~g~~d  287 (633)
T PF05693_consen  210 HKHSIERAAAHYADVFTTVSEITAKEAEHLLKRK--PDVVTPNGLNVDKFPALHEFQNLHAKAKEKIHEFVRGHFYGHYD  287 (633)
T ss_dssp             HHHHHHHHHHHHSSEEEESSHHHHHHHHHHHSS----SEE----B-GGGTSSTTHHHHHHHHHHHHHHHHHHHHSTT---
T ss_pred             HHHHHHHHHHHhcCeeeehhhhHHHHHHHHhCCC--CCEEcCCCccccccccchHHHHHHHHHHHHHHHHHHHHhcccCC
Confidence            4455566778899999999999999888766533  23688999998877654321       111    111    134


Q ss_pred             CCCCCcEEEEEecccc-cccChHHHHHHHHHHHhh----CCCeE---EEEEeCCC----------------cH-------
Q 039338          306 IPKNASLVLGVAGRLV-KDKGHPLLHEAFSKLMVK----YPDVY---LIVAGSGP----------------WE-------  354 (493)
Q Consensus       306 i~~~~~~~i~~~Gr~~-~~Kg~~~ll~a~~~l~~~----~~~~~---l~i~G~g~----------------~~-------  354 (493)
                      ++.++.+.|...||.+ ..||+|.+++|+.+|...    ..+..   |+++-...                .+       
T Consensus       288 fd~d~tl~~ftsGRYEf~NKG~D~fieAL~rLn~~lk~~~~~~tVVaFii~pa~~~~~~ve~l~~~a~~~~l~~t~~~i~  367 (633)
T PF05693_consen  288 FDLDKTLYFFTSGRYEFRNKGIDVFIEALARLNHRLKQAGSDKTVVAFIIVPAKTNSFNVESLKGQAVTKQLRDTVDEIQ  367 (633)
T ss_dssp             S-GGGEEEEEEESSS-TTTTTHHHHHHHHHHHHHHHHHTT-S-EEEEEEE---SEEEE-HHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCccceEEEEeeeceeeecCCccHHHHHHHHHHHHHhhcCCCCeEEEEEEecCccCCcCHHHHhhHHHHHHHHHHHHHHH
Confidence            4455668888999997 589999999999998542    23333   33332110                00       


Q ss_pred             H----------------------------HHh--------------------------------hhc------Cc--EEE
Q 039338          355 Q----------------------------RYK--------------------------------DFG------HQ--VLV  366 (493)
Q Consensus       355 ~----------------------------~~~--------------------------------~l~------~~--V~~  366 (493)
                      +                            .++                                +++      ++  |+|
T Consensus       368 ~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~lkr~i~~~~r~~lPPi~TH~l~d~~~DpILn~irr~~L~N~~~drVKVIF  447 (633)
T PF05693_consen  368 EKIGKRLFESCLSGRLPDLNELLDKEDIVRLKRCIFALQRNSLPPITTHNLHDDSNDPILNMIRRLGLFNNPEDRVKVIF  447 (633)
T ss_dssp             HHHHHHHHHHHHHSSS-SHHHCS-HHHHHHHHHHHHTT--T----SBSEEETTTTT-HHHHHHHHTT----TT-SEEEEE
T ss_pred             HHHHHHHHHHHhCCCCCChHHhcChhhHHHHHHHHHHhccCCCCCeeeeCCCCCccCHHHHHHHhCCCCCCCCCceEEEE
Confidence            0                            000                                001      33  455


Q ss_pred             ecCC-C------HHHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCccceee-----eCcceEEECC-
Q 039338          367 MGSM-S------PAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVV-----DDEFGFMFAP-  433 (493)
Q Consensus       367 ~g~~-~------~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~-----~~~~G~~~~~-  433 (493)
                      .+.. +      .-++.+++..||+.|+||. +|++|.|.+|+.++|+|.|+|+..|.. ..+.     ....|+.+-. 
T Consensus       448 ~P~yL~~~dgif~l~Y~dfv~GcdLgvFPSY-YEPWGYTPlE~~a~gVPsITTnLsGFG-~~~~~~~~~~~~~GV~VvdR  525 (633)
T PF05693_consen  448 HPEYLSGTDGIFNLDYYDFVRGCDLGVFPSY-YEPWGYTPLECTAFGVPSITTNLSGFG-CWMQEHIEDPEEYGVYVVDR  525 (633)
T ss_dssp             --S---TTSSSS-S-HHHHHHHSSEEEE--S-SBSS-HHHHHHHHTT--EEEETTBHHH-HHHHTTS-HHGGGTEEEE-S
T ss_pred             eeccccCCCCCCCCCHHHHhccCceeeeccc-cccccCChHHHhhcCCceeeccchhHH-HHHHHhhccCcCCcEEEEeC
Confidence            4421 1      2478899999999999996 599999999999999999999987764 2222     2345665532 


Q ss_pred             ---C----HHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhcc
Q 039338          434 ---N----VESLHKTLEAAVSEGPMRLAQRGEACRQYAASMFTANKMALAYERLFLCIKNET  488 (493)
Q Consensus       434 ---d----~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~i~~~~  488 (493)
                         +    ++++++.|.++...++..+..++.++.+..+ ..+|+++...|.+.|+..+.+.
T Consensus       526 ~~~n~~e~v~~la~~l~~f~~~~~rqri~~Rn~ae~LS~-~~dW~~~~~yY~~Ay~~AL~~a  586 (633)
T PF05693_consen  526 RDKNYDESVNQLADFLYKFCQLSRRQRIIQRNRAERLSD-LADWKNFGKYYEKAYDLALRRA  586 (633)
T ss_dssp             SSS-HHHHHHHHHHHHHHHHT--HHHHHHHHHHHHHHGG-GGBHHHHCHHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHHHHHhc
Confidence               3    4566666777766656666666666655554 4899999999999999877654

Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.

>PRK10117 trehalose-6-phosphate synthase; Provisional

Probab=99.48  E-value=6.7e-12  Score=122.47  Aligned_cols=276  Identities=14%  Similarity=0.156  Sum_probs=190.5

Q ss_pred             CcEEEeCccc---hhHHhhhccC--cEEEEeccchhhhhhhhhhhhhhcCCCCccchHhHhHHHHHHHHHHHHHHhhccC
Q 039338          179 FDVVHSESVA---LPHWLARNVT--NLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQGVMLKVLNEIRFFNKY  253 (493)
Q Consensus       179 ~DiI~~~~~~---~~~~~~~~~p--~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (493)
                      -|+|.+|++.   ++.++....|  ++...+|-+++.   ++++..+.             .-...+       +-+-.+
T Consensus       124 ~D~VWVHDYhL~llp~~LR~~~~~~~IgFFlHiPFPs---~eifr~LP-------------~r~eil-------~glL~a  180 (474)
T PRK10117        124 DDIIWIHDYHLLPFASELRKRGVNNRIGFFLHIPFPT---PEIFNALP-------------PHDELL-------EQLCDY  180 (474)
T ss_pred             CCEEEEeccHhhHHHHHHHHhCCCCcEEEEEeCCCCC---hHHHhhCC-------------ChHHHH-------HHHHhC
Confidence            4899999874   4444544433  377788876543   23333221             111111       234467


Q ss_pred             CeEEEcChhHHHHHHHH----hCCC------------CCcEEEecCCccCCCccCCcc-----cchhhhhhhCCCCCCcE
Q 039338          254 AHHVAISDSCGEMLRDV----YQIP------------SERVHVILNGINENEYGVDLS-----LGQSFRSRIGIPKNASL  312 (493)
Q Consensus       254 d~ii~~S~~~~~~~~~~----~~~~------------~~~v~vi~ngvd~~~~~~~~~-----~~~~~r~~~~i~~~~~~  312 (493)
                      |.|=+-+...++.+.+.    .|..            .-++.+.|-|||.+.|.....     ....++++++   ++ .
T Consensus       181 DlIGFqt~~y~rnFl~~~~~~lg~~~~~~~~v~~~gr~v~v~~~PigID~~~~~~~a~~~~~~~~~~lr~~~~---~~-~  256 (474)
T PRK10117        181 DLLGFQTENDRLAFLDCLSNLTRVTTRSGKSHTAWGKAFRTEVYPIGIEPDEIAKQAAGPLPPKLAQLKAELK---NV-Q  256 (474)
T ss_pred             ccceeCCHHHHHHHHHHHHHHcCCcccCCCeEEECCeEEEEEEEECeEcHHHHHHHhhchHHHHHHHHHHHcC---CC-e
Confidence            88888887776655431    1211            123667788999887743211     1233455543   33 4


Q ss_pred             EEEEecccccccChHHHHHHHHHHHhhCCC----eEEEEEeCCC-----c----HHHHhhh--------c----CcEE-E
Q 039338          313 VLGVAGRLVKDKGHPLLHEAFSKLMVKYPD----VYLIVAGSGP-----W----EQRYKDF--------G----HQVL-V  366 (493)
Q Consensus       313 ~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~----~~l~i~G~g~-----~----~~~~~~l--------~----~~V~-~  366 (493)
                      +|+-+.|++..||+..=++|+.++.+++|+    +.|+-+....     .    +..++++        +    ..|. +
T Consensus       257 lilgVDRLDytKGi~~rl~Afe~fL~~~Pe~~gkvvlvQia~psR~~v~~Y~~l~~~v~~~vg~INg~fg~~~w~Pv~y~  336 (474)
T PRK10117        257 NIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLETEAGRINGKYGQLGWTPLYYL  336 (474)
T ss_pred             EEEEecccccccCHHHHHHHHHHHHHhChhhcCCEEEEEEcCCCCCccHHHHHHHHHHHHHHHHHHhccCCCCceeEEEe
Confidence            666899999999999999999999998874    5566554321     1    1112221        1    1244 3


Q ss_pred             ecCCCHHHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcCC-----cEEecCCCCCccceeeeCcceEEECC-CHHHHHH
Q 039338          367 MGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGK-----PVMASRFPSIKGTIVVDDEFGFMFAP-NVESLHK  440 (493)
Q Consensus       367 ~g~~~~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G~-----PvI~s~~~~~~~e~v~~~~~G~~~~~-d~~~l~~  440 (493)
                      ...++.+++..+|+.||+++.++++ +|..++..|+.+|..     ++|.|...|..++ +.   .+++++| |.+++++
T Consensus       337 ~~~~~~~~l~alyr~ADv~lVTplR-DGMNLVAkEyva~q~~~~~GvLILSefAGaA~~-L~---~AllVNP~d~~~~A~  411 (474)
T PRK10117        337 NQHFDRKLLMKIFRYSDVGLVTPLR-DGMNLVAKEYVAAQDPANPGVLVLSQFAGAANE-LT---SALIVNPYDRDEVAA  411 (474)
T ss_pred             cCCCCHHHHHHHHHhccEEEecccc-cccccccchheeeecCCCCccEEEecccchHHH-hC---CCeEECCCCHHHHHH
Confidence            4567999999999999999999987 999999999999976     3788888888743 32   4889999 9999999


Q ss_pred             HHHHHHHcCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhc
Q 039338          441 TLEAAVSEGPMRLAQRGEACRQYAASMFTANKMALAYERLFLCIKNE  487 (493)
Q Consensus       441 ~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~i~~~  487 (493)
                      +|.+++..+.+++++..+..++.+.. +|....++.+.+-+..+...
T Consensus       412 Ai~~AL~Mp~~Er~~R~~~l~~~v~~-~dv~~W~~~fL~~L~~~~~~  457 (474)
T PRK10117        412 ALDRALTMPLAERISRHAEMLDVIVK-NDINHWQECFISDLKQIVPR  457 (474)
T ss_pred             HHHHHHcCCHHHHHHHHHHHHHHhhh-CCHHHHHHHHHHHHHHhhhc
Confidence            99999999888888888888888887 69999999988888776433

>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1

Probab=99.46  E-value=5.6e-12  Score=121.12  Aligned_cols=293  Identities=19%  Similarity=0.177  Sum_probs=165.7

Q ss_pred             eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCCCcc--
Q 039338           84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEADKW--  161 (493)
Q Consensus        84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  161 (493)
                      |||++....     ..-|.-.+...++++|  +||+|++++.....  .........     ...+.+....... ..  
T Consensus         1 MkIl~~v~~-----~G~GH~~R~~~la~~L--rg~~v~~~~~~~~~--~~~~~~~~~-----~~~~~~~~~~~~~-~~~~   65 (318)
T PF13528_consen    1 MKILFYVQG-----HGLGHASRCLALARAL--RGHEVTFITSGPAP--EFLKPRFPV-----REIPGLGPIQENG-RLDR   65 (318)
T ss_pred             CEEEEEeCC-----CCcCHHHHHHHHHHHH--ccCceEEEEcCCcH--HHhccccCE-----EEccCceEeccCC-ccch
Confidence            899999974     4678888899999999  48999999987543  111110000     0011111111110 11  


Q ss_pred             ------------ccccchHHHHHHhcCCCCcEEEeCccchhHHhh--hccCcEEEEeccchhhhhhhhhhhhhhcCCCCc
Q 039338          162 ------------RYSKGWEQFDEENQREPFDVVHSESVALPHWLA--RNVTNLAVSWHGIALESLQSGIFQDLTRKPLEP  227 (493)
Q Consensus       162 ------------~~~~~~~~~~~~~~~~~~DiI~~~~~~~~~~~~--~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~  227 (493)
                                  ......+...+.+++.+||+|++....+..+.+  .++| .+...|..+........          .
T Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~pDlVIsD~~~~~~~aa~~~giP-~i~i~~~~~~~~~~~~~----------~  134 (318)
T PF13528_consen   66 WKTVRNNIRWLARLARRIRREIRWLREFRPDLVISDFYPLAALAARRAGIP-VIVISNQYWFLHPNFWL----------P  134 (318)
T ss_pred             HHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEcChHHHHHHHHhcCCC-EEEEEehHHcccccCCc----------c
Confidence                        112233445556678899999998765544433  4567 66555544322100000          0


Q ss_pred             cchHhHhHHHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCCC
Q 039338          228 MSLAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIP  307 (493)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~  307 (493)
                      .    ...+...+.+...+ ..+..++..+..+.... ..      ...++.+++..+........             +
T Consensus       135 ~----~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~-~~------~~~~~~~~~p~~~~~~~~~~-------------~  189 (318)
T PF13528_consen  135 W----DQDFGRLIERYIDR-YHFPPADRRLALSFYPP-LP------PFFRVPFVGPIIRPEIRELP-------------P  189 (318)
T ss_pred             h----hhhHHHHHHHhhhh-ccCCcccceecCCcccc-cc------ccccccccCchhcccccccC-------------C
Confidence            0    01122222222211 12444555555444311 00      11123333333322211111             1


Q ss_pred             CCCcEEEEEecccccccChHHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhhhcCcEEEecCCCHHHHHHHHHHcCEEEe
Q 039338          308 KNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDFGHQVLVMGSMSPAELRAFYNAIDIFVN  387 (493)
Q Consensus       308 ~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~l~~~V~~~g~~~~~~~~~~~~~adv~v~  387 (493)
                      .+++.+++++|..+..    .++++++.+    ++.+++++|......    ..+||.+.++.. .++.+++++||++|.
T Consensus       190 ~~~~~iLv~~gg~~~~----~~~~~l~~~----~~~~~~v~g~~~~~~----~~~ni~~~~~~~-~~~~~~m~~ad~vIs  256 (318)
T PF13528_consen  190 EDEPKILVYFGGGGPG----DLIEALKAL----PDYQFIVFGPNAADP----RPGNIHVRPFST-PDFAELMAAADLVIS  256 (318)
T ss_pred             CCCCEEEEEeCCCcHH----HHHHHHHhC----CCCeEEEEcCCcccc----cCCCEEEeecCh-HHHHHHHHhCCEEEE
Confidence            2334788899987654    556666665    578888888653111    158999888753 789999999999996


Q ss_pred             CCCCCCCCChHHHHHHHcCCcEEecCCCCCccc-----eeeeCcceEEECC---CHHHHHHHHHHH
Q 039338          388 PTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGT-----IVVDDEFGFMFAP---NVESLHKTLEAA  445 (493)
Q Consensus       388 ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e-----~v~~~~~G~~~~~---d~~~l~~~i~~l  445 (493)
                      ..    |+ +++.||+++|+|+|+....+..|+     .+.+.+.|..++.   +++.|.++|+++
T Consensus       257 ~~----G~-~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~~G~~~~~~~~~~~~~~l~~~l~~~  317 (318)
T PF13528_consen  257 KG----GY-TTISEALALGKPALVIPRPGQDEQEYNARKLEELGLGIVLSQEDLTPERLAEFLERL  317 (318)
T ss_pred             CC----CH-HHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHHCCCeEEcccccCCHHHHHHHHhcC
Confidence            32    32 379999999999999987665532     3455667777653   788888888754

>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing

Probab=99.46  E-value=2.6e-11  Score=117.73  Aligned_cols=312  Identities=13%  Similarity=0.127  Sum_probs=181.0

Q ss_pred             eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhC-CCEEEEEecCCCCCCCCC----CccccCCCCCCCCCCceEeecCCC
Q 039338           84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARR-GHRVHIFTSPVDNINSPS----ISHQENDDGSNNKYPLLHFHEGEA  158 (493)
Q Consensus        84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~-G~~V~v~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~  158 (493)
                      |||++|+..=|      ... -+..+.++|.+. ++++.++.+..+.  +..    ...... .++... ..+.......
T Consensus         1 ~ki~~v~GtRp------e~i-klapv~~~l~~~~~~~~~lv~tGqH~--~~~~g~~~~~~~~-~~~~~~-~~~~~~~~~~   69 (365)
T TIGR03568         1 KKICVVTGTRA------DYG-LLRPLLKALQDDPDLELQLIVTGMHL--SPEYGNTVNEIEK-DGFDID-EKIEILLDSD   69 (365)
T ss_pred             CeEEEEEecCh------hHH-HHHHHHHHHhcCCCCcEEEEEeCCCC--ChhhccHHHHHHH-cCCCCC-CccccccCCC
Confidence            68999987432      222 377889999874 7899888876554  211    111000 001110 1122111111


Q ss_pred             --C--ccccccchHHHHHHhcCCCCcEEEeCccc------hhHHhhhccCcEEEEeccchhhhhhhhhhhhhhcCCCCcc
Q 039338          159 --D--KWRYSKGWEQFDEENQREPFDVVHSESVA------LPHWLARNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPM  228 (493)
Q Consensus       159 --~--~~~~~~~~~~~~~~~~~~~~DiI~~~~~~------~~~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~  228 (493)
                        .  .-........+.+.+.+.+||+|++++-.      ..+....++| ++ .+|+-...             .+   
T Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~~Pd~vlv~GD~~~~la~alaA~~~~IP-v~-HveaG~rs-------------~~---  131 (365)
T TIGR03568        70 SNAGMAKSMGLTIIGFSDAFERLKPDLVVVLGDRFEMLAAAIAAALLNIP-IA-HIHGGEVT-------------EG---  131 (365)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHhCCCEEEEeCCchHHHHHHHHHHHhCCc-EE-EEECCccC-------------CC---
Confidence              1  11233455677777888999999998732      2233345667 44 44442100             00   


Q ss_pred             chHhHhHHHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecC-CccCCCccCCcccchhhhhhhCCC
Q 039338          229 SLAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILN-GINENEYGVDLSLGQSFRSRIGIP  307 (493)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~n-gvd~~~~~~~~~~~~~~r~~~~i~  307 (493)
                            .......+..     -+-++..++.++..++.+.+ -|.+..++.++.| ++|.-.... ......+.+++|++
T Consensus       132 ------~~eE~~r~~i-----~~la~l~f~~t~~~~~~L~~-eg~~~~~i~~tG~~~iD~l~~~~-~~~~~~~~~~lgl~  198 (365)
T TIGR03568       132 ------AIDESIRHAI-----TKLSHLHFVATEEYRQRVIQ-MGEDPDRVFNVGSPGLDNILSLD-LLSKEELEEKLGID  198 (365)
T ss_pred             ------CchHHHHHHH-----HHHHhhccCCCHHHHHHHHH-cCCCCCcEEEECCcHHHHHHhhh-ccCHHHHHHHhCCC
Confidence                  0001111111     12345667888998888877 5888888998877 444322211 12345777888987


Q ss_pred             CCCcEEEEEecccc--cccChHHHHHHHHHHHhhCCCeEEEEEeCCC-c---HHHHhhh---cCcEEEecCCCHHHHHHH
Q 039338          308 KNASLVLGVAGRLV--KDKGHPLLHEAFSKLMVKYPDVYLIVAGSGP-W---EQRYKDF---GHQVLVMGSMSPAELRAF  378 (493)
Q Consensus       308 ~~~~~~i~~~Gr~~--~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~-~---~~~~~~l---~~~V~~~g~~~~~~~~~~  378 (493)
                      .+++++++.+-+-.  .....+.+.+.++.+.+...++.++.-..++ .   .+.++++   .++|.+.+.++..++..+
T Consensus       199 ~~~~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~~~~~~vi~P~~~p~~~~i~~~i~~~~~~~~~v~l~~~l~~~~~l~L  278 (365)
T TIGR03568       199 LDKPYALVTFHPVTLEKESAEEQIKELLKALDELNKNYIFTYPNADAGSRIINEAIEEYVNEHPNFRLFKSLGQERYLSL  278 (365)
T ss_pred             CCCCEEEEEeCCCcccccCchHHHHHHHHHHHHhccCCEEEEeCCCCCchHHHHHHHHHhcCCCCEEEECCCChHHHHHH
Confidence            55446555554432  2333344444444444433344332212222 1   2333433   368999999999999999


Q ss_pred             HHHcCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCccceeeeCcceEEECCCHHHHHHHHHHHH
Q 039338          379 YNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAPNVESLHKTLEAAV  446 (493)
Q Consensus       379 ~~~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~~d~~~l~~~i~~ll  446 (493)
                      ++.||++|-.|     .| .+.||.++|+|+|+..  .-+ |.+..+.+.+.+..|++++.+++.+++
T Consensus       279 l~~a~~vitdS-----Sg-gi~EA~~lg~Pvv~l~--~R~-e~~~~g~nvl~vg~~~~~I~~a~~~~~  337 (365)
T TIGR03568       279 LKNADAVIGNS-----SS-GIIEAPSFGVPTINIG--TRQ-KGRLRADSVIDVDPDKEEIVKAIEKLL  337 (365)
T ss_pred             HHhCCEEEEcC-----hh-HHHhhhhcCCCEEeec--CCc-hhhhhcCeEEEeCCCHHHHHHHHHHHh
Confidence            99999999533     12 3389999999999654  444 777778888878669999999999954

This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.

>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=99.46  E-value=1.5e-11  Score=121.63  Aligned_cols=274  Identities=20%  Similarity=0.273  Sum_probs=160.8

Q ss_pred             CCcEEEeCccc---hhHHhhhccC--cEEEEeccchhhhhhhhhhhhhhcCCCCccchHhHhHHHHHHHHHHHHHHhhcc
Q 039338          178 PFDVVHSESVA---LPHWLARNVT--NLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQGVMLKVLNEIRFFNK  252 (493)
Q Consensus       178 ~~DiI~~~~~~---~~~~~~~~~p--~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (493)
                      .-|+|.+|++.   ++.++.+..|  ++...+|-+++.   ++++..+.             .....+       +-+-.
T Consensus       141 ~~D~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPFPs---~e~fr~lP-------------~r~eiL-------~glL~  197 (474)
T PF00982_consen  141 PGDLVWVHDYHLMLLPQMLRERGPDARIGFFLHIPFPS---SEIFRCLP-------------WREEIL-------RGLLG  197 (474)
T ss_dssp             TT-EEEEESGGGTTHHHHHHHTT--SEEEEEE-S-------HHHHTTST-------------THHHHH-------HHHTT
T ss_pred             CCCEEEEeCCcHHHHHHHHHhhcCCceEeeEEecCCCC---HHHHhhCC-------------cHHHHH-------HHhhc
Confidence            56899999873   5555555544  377778876543   23333221             111112       33457


Q ss_pred             CCeEEEcChhHHHHHHH----HhCCC-------------CCcEEEecCCccCCCccCCc------ccchhhhhhhCCCCC
Q 039338          253 YAHHVAISDSCGEMLRD----VYQIP-------------SERVHVILNGINENEYGVDL------SLGQSFRSRIGIPKN  309 (493)
Q Consensus       253 ~d~ii~~S~~~~~~~~~----~~~~~-------------~~~v~vi~ngvd~~~~~~~~------~~~~~~r~~~~i~~~  309 (493)
                      ||.|-+.+...++.+..    .+|..             .-++.+.|-|||.+.+....      .....++++++   +
T Consensus       198 aDlIgFqt~~~~~nFl~~~~r~lg~~~~~~~~~v~~~Gr~v~v~~~pigId~~~~~~~~~~~~v~~~~~~l~~~~~---~  274 (474)
T PF00982_consen  198 ADLIGFQTFEYARNFLSCCKRLLGLEVDSDRGTVEYNGRRVRVGVFPIGIDPDAFAQLARSPEVQERAEELREKFK---G  274 (474)
T ss_dssp             SSEEEESSHHHHHHHHHHHHHHS-EEEEETTE-EEETTEEEEEEE------HHHHHHHHH-S---HHHHHHHHHTT---T
T ss_pred             CCEEEEecHHHHHHHHHHHHHHcCCcccCCCceEEECCEEEEEEEeeccCChHHHHhhccChHHHHHHHHHHHhcC---C
Confidence            99999999888776543    23321             12367778899987764311      12344556553   3


Q ss_pred             CcEEEEEecccccccChHHHHHHHHHHHhhCC----CeEEEEEeCC---Cc------HHHHhhh--------c----CcE
Q 039338          310 ASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYP----DVYLIVAGSG---PW------EQRYKDF--------G----HQV  364 (493)
Q Consensus       310 ~~~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~----~~~l~i~G~g---~~------~~~~~~l--------~----~~V  364 (493)
                      +..+|+-+.|++..||+..=+.|+.++.+++|    ++.|+-++..   ..      .+.+.++        +    ..|
T Consensus       275 ~~~ii~gvDrld~~kGi~~kl~Afe~fL~~~P~~~~kv~liQi~~psr~~~~~y~~~~~~v~~~v~~IN~~~g~~~~~PI  354 (474)
T PF00982_consen  275 KRKIIVGVDRLDYTKGIPEKLRAFERFLERYPEYRGKVVLIQIAVPSREDVPEYQELRREVEELVGRINGKYGTPDWTPI  354 (474)
T ss_dssp             -SEEEEEE--B-GGG-HHHHHHHHHHHHHH-GGGTTTEEEEEE--B-STTSHHHHHHHHHHHHHHHHHHHHH-BTTB-SE
T ss_pred             CcEEEEEeccchhhcCHHHHHHHHHHHHHhCcCccCcEEEEEEeeccCccchhHHHHHHHHHHHHHHHHhhcccCCceeE
Confidence            22567799999999999999999999999876    4666656531   11      1112111        1    124


Q ss_pred             -EEecCCCHHHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcCCc----EEecCCCCCccceeeeCcceEEECC-CHHHH
Q 039338          365 -LVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKP----VMASRFPSIKGTIVVDDEFGFMFAP-NVESL  438 (493)
Q Consensus       365 -~~~g~~~~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G~P----vI~s~~~~~~~e~v~~~~~G~~~~~-d~~~l  438 (493)
                       .+.+.++.+++..+|+.||+++.+|.+ +|..++..|+.+|...    +|.|...|.. +.+  ++..++++| |++++
T Consensus       355 ~~~~~~~~~~~~~aly~~aDv~lvTslr-DGmNLva~Eyva~q~~~~GvLiLSefaGaa-~~L--~~~al~VNP~d~~~~  430 (474)
T PF00982_consen  355 IYIYRSLSFEELLALYRAADVALVTSLR-DGMNLVAKEYVACQDDNPGVLILSEFAGAA-EQL--SEAALLVNPWDIEEV  430 (474)
T ss_dssp             EEE-S---HHHHHHHHHH-SEEEE--SS-BS--HHHHHHHHHS-TS--EEEEETTBGGG-GT---TTS-EEE-TT-HHHH
T ss_pred             EEEecCCCHHHHHHHHHhhhhEEecchh-hccCCcceEEEEEecCCCCceEeeccCCHH-HHc--CCccEEECCCChHHH
Confidence             455678999999999999999999987 9999999999999875    7778887877 333  223489999 99999


Q ss_pred             HHHHHHHHHcCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 039338          439 HKTLEAAVSEGPMRLAQRGEACRQYAASMFTANKMALAYERLFL  482 (493)
Q Consensus       439 ~~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~  482 (493)
                      +++|.+++..++++++..-+..++.+.+ ++....++.+.+-++
T Consensus       431 A~ai~~AL~M~~~Er~~r~~~~~~~v~~-~~~~~W~~~~l~~L~  473 (474)
T PF00982_consen  431 ADAIHEALTMPPEERKERHARLREYVRE-HDVQWWAESFLRDLK  473 (474)
T ss_dssp             HHHHHHHHT--HHHHHHHHHHHHHHHHH-T-HHHHHHHHHHHHH
T ss_pred             HHHHHHHHcCCHHHHHHHHHHHHHHhHh-CCHHHHHHHHHHHhh
Confidence            9999999999788888888888888887 688888887766543

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B.

>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A

Probab=99.45  E-value=6.8e-13  Score=113.49  Aligned_cols=151  Identities=30%  Similarity=0.389  Sum_probs=83.2

Q ss_pred             CchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCC--CccccccchHHHHHHh--c
Q 039338          100 GGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEA--DKWRYSKGWEQFDEEN--Q  175 (493)
Q Consensus       100 gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~--~  175 (493)
                      ||+++++.+|+++|+++||+|++++.....  ......        .....+.......  ..+........+.+.+  +
T Consensus         1 GG~~~~~~~l~~~L~~~G~~V~v~~~~~~~--~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   70 (160)
T PF13579_consen    1 GGIERYVRELARALAARGHEVTVVTPQPDP--EDDEEE--------EDGVRVHRLPLPRRPWPLRLLRFLRRLRRLLAAR   70 (160)
T ss_dssp             SHHHHHHHHHHHHHHHTT-EEEEEEE---G--GG-SEE--------ETTEEEEEE--S-SSSGGGHCCHHHHHHHHCHHC
T ss_pred             CCHHHHHHHHHHHHHHCCCEEEEEecCCCC--cccccc--------cCCceEEeccCCccchhhhhHHHHHHHHHHHhhh
Confidence            899999999999999999999999987766  211111        1122222222211  2233344556677777  8


Q ss_pred             CCCCcEEEeCccc--hhHHhh---hccCcEEEEeccchhhhhhhhhhhhhhcCCCCccchHhHhHHHHHHHHHHHHHHhh
Q 039338          176 REPFDVVHSESVA--LPHWLA---RNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQGVMLKVLNEIRFF  250 (493)
Q Consensus       176 ~~~~DiI~~~~~~--~~~~~~---~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (493)
                      +.+||+||++++.  +..++.   .++| ++.++|+......                 ..+...+...+     ++..+
T Consensus        71 ~~~~Dvv~~~~~~~~~~~~~~~~~~~~p-~v~~~h~~~~~~~-----------------~~~~~~~~~~~-----~~~~~  127 (160)
T PF13579_consen   71 RERPDVVHAHSPTAGLVAALARRRRGIP-LVVTVHGTLFRRG-----------------SRWKRRLYRWL-----ERRLL  127 (160)
T ss_dssp             T---SEEEEEHHHHHHHHHHHHHHHT---EEEE-SS-T-----------------------HHHHHHHHH-----HHHHH
T ss_pred             ccCCeEEEecccchhHHHHHHHHccCCc-EEEEECCCchhhc-----------------cchhhHHHHHH-----HHHHH
Confidence            8999999999852  122222   3557 9999998432110                 00111222222     44778


Q ss_pred             ccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCC
Q 039338          251 NKYAHHVAISDSCGEMLRDVYQIPSERVHVILNG  284 (493)
Q Consensus       251 ~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ng  284 (493)
                      +.+|.++++|+.+++.+.+ +|++.+++.|||||
T Consensus       128 ~~ad~vi~~S~~~~~~l~~-~g~~~~ri~vipnG  160 (160)
T PF13579_consen  128 RRADRVIVVSEAMRRYLRR-YGVPPDRIHVIPNG  160 (160)
T ss_dssp             HH-SEEEESSHHHHHHHHH-H---GGGEEE----
T ss_pred             hcCCEEEECCHHHHHHHHH-hCCCCCcEEEeCcC
Confidence            8999999999999999999 89999999999997

>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1

Probab=99.44  E-value=5e-13  Score=102.65  Aligned_cols=92  Identities=23%  Similarity=0.352  Sum_probs=84.3

Q ss_pred             EEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCccceeeeCcceEEECCCHHHHHHHHHHHHHcCcHHHHHHHHHHHHH
Q 039338          384 IFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAPNVESLHKTLEAAVSEGPMRLAQRGEACRQY  463 (493)
Q Consensus       384 v~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~  463 (493)
                      +.++|+. ..+++.+++|+|+||+|||+.+.++.. +++.++..++.++ |++++.+++..+++| ++.++++++++++.
T Consensus         1 i~Ln~~~-~~~~~~r~~E~~a~G~~vi~~~~~~~~-~~~~~~~~~~~~~-~~~el~~~i~~ll~~-~~~~~~ia~~a~~~   76 (92)
T PF13524_consen    1 INLNPSR-SDGPNMRIFEAMACGTPVISDDSPGLR-EIFEDGEHIITYN-DPEELAEKIEYLLEN-PEERRRIAKNARER   76 (92)
T ss_pred             CEeeCCC-CCCCchHHHHHHHCCCeEEECChHHHH-HHcCCCCeEEEEC-CHHHHHHHHHHHHCC-HHHHHHHHHHHHHH
Confidence            3577875 489999999999999999999998888 7888888999999 999999999999999 99999999999999


Q ss_pred             HHHhcCHHHHHHHHHH
Q 039338          464 AASMFTANKMALAYER  479 (493)
Q Consensus       464 ~~~~fs~~~~~~~~~~  479 (493)
                      ++++|+|++.++++.+
T Consensus        77 v~~~~t~~~~~~~il~   92 (92)
T PF13524_consen   77 VLKRHTWEHRAEQILE   92 (92)
T ss_pred             HHHhCCHHHHHHHHHC
Confidence            9999999999998863

>TIGR03492 conserved hypothetical protein

Probab=99.43  E-value=3.7e-11  Score=117.78  Aligned_cols=332  Identities=10%  Similarity=-0.037  Sum_probs=187.4

Q ss_pred             CCCchHHHHHHHHHHHHh--CCCEEE---EEecCCCCCCCCCCccccCCCCCCCCCCceEeecCC-CCccc---------
Q 039338           98 TPGGMERHAHTLHVALAR--RGHRVH---IFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGE-ADKWR---------  162 (493)
Q Consensus        98 ~~gG~~~~~~~l~~~L~~--~G~~V~---v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---------  162 (493)
                      +.+|-......++++|.+  .|++|.   ++...... .....         ...+ ....+... .....         
T Consensus         5 nghged~~a~ai~~~l~~~~~~~~v~~~p~vG~~~~~-e~~~i---------p~~g-~~~~~~sgg~~~~~~~~~~~~~~   73 (396)
T TIGR03492         5 NGHGEDLIAARIAKALLQLSPDLNLEALPLVGEGRAY-QNLGI---------PIIG-PTKELPSGGFSYQSLRGLLRDLR   73 (396)
T ss_pred             CCchHHHHHHHHHHHHHhhCCCCCeEEeCcccCCHHH-hhCCC---------ceeC-CCCCCCCCCccCCCHHHHHHHHH
Confidence            556777778899999998  699999   66655433 11111         1111 11111111 00111         


Q ss_pred             --cccchHHHHHHhcCC--CCcEEEeCccchhH--HhhhccCcEEEEeccchhhh------hhhhhhhhhhcCCCCccch
Q 039338          163 --YSKGWEQFDEENQRE--PFDVVHSESVALPH--WLARNVTNLAVSWHGIALES------LQSGIFQDLTRKPLEPMSL  230 (493)
Q Consensus       163 --~~~~~~~~~~~~~~~--~~DiI~~~~~~~~~--~~~~~~p~~v~~~h~~~~~~------~~~~~~~~~~~~~~~~~~~  230 (493)
                        ......+-.+++++.  +||+|+..+-..+.  ....++|-+++-.|.-....      ..++.+..+.+....    
T Consensus        74 ~gl~~~~~~~~~~~~~~~~~p~~v~~~Gg~v~~~aA~~~~~p~~~~~~~esn~~~~~~~~~~~~~~~~~~~G~~~~----  149 (396)
T TIGR03492        74 AGLVGLTLGQWRALRKWAKKGDLIVAVGDIVPLLFAWLSGKPYAFVGTAKSDYYWESGPRRSPSDEYHRLEGSLYL----  149 (396)
T ss_pred             hhHHHHHHHHHHHHHHHhhcCCEEEEECcHHHHHHHHHcCCCceEEEeeccceeecCCCCCccchhhhccCCCccC----
Confidence              111122223334555  99999988654333  33346674554556432220      111111111111000    


Q ss_pred             HhHhHHHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCCCCCC
Q 039338          231 AFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNA  310 (493)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~  310 (493)
                          .+.  ..+     -.-+.|+.+.+..+...+.+.+ .|+   ++.++.|++-........       .  +++++.
T Consensus       150 ----p~e--~n~-----l~~~~a~~v~~~~~~t~~~l~~-~g~---k~~~vGnPv~d~l~~~~~-------~--~l~~~~  205 (396)
T TIGR03492       150 ----PWE--RWL-----MRSRRCLAVFVRDRLTARDLRR-QGV---RASYLGNPMMDGLEPPER-------K--PLLTGR  205 (396)
T ss_pred             ----HHH--HHH-----hhchhhCEEeCCCHHHHHHHHH-CCC---eEEEeCcCHHhcCccccc-------c--ccCCCC
Confidence                000  011     2235788888888888888876 454   789999987554321111       0  455555


Q ss_pred             cEEEEEeccccc--ccChHHHHHHHHHHHhhCCCeEEEEEe-CCCcHHHHhh----hc----------------CcEEEe
Q 039338          311 SLVLGVAGRLVK--DKGHPLLHEAFSKLMVKYPDVYLIVAG-SGPWEQRYKD----FG----------------HQVLVM  367 (493)
Q Consensus       311 ~~~i~~~Gr~~~--~Kg~~~ll~a~~~l~~~~~~~~l~i~G-~g~~~~~~~~----l~----------------~~V~~~  367 (493)
                      +.+++..|+-..  .+++..+++++..+.++ +++++++.- .+...+.+++    .+                +++.+.
T Consensus       206 ~~lllLpGSR~ae~~~~lp~~l~al~~L~~~-~~~~~v~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~v~  284 (396)
T TIGR03492       206 FRIALLPGSRPPEAYRNLKLLLRALEALPDS-QPFVFLAAIVPSLSLEKLQAILEDLGWQLEGSSEDQTSLFQKGTLEVL  284 (396)
T ss_pred             CEEEEECCCCHHHHHccHHHHHHHHHHHhhC-CCeEEEEEeCCCCCHHHHHHHHHhcCceecCCccccchhhccCceEEE
Confidence            566667776533  46778999999999766 678876653 3333333322    11                125555


Q ss_pred             cCCCHHHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCcc--ceeeeC----cceEEECC-CHHHHHH
Q 039338          368 GSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKG--TIVVDD----EFGFMFAP-NVESLHK  440 (493)
Q Consensus       368 g~~~~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~--e~v~~~----~~G~~~~~-d~~~l~~  440 (493)
                      .+.  .++.++|++||++|..|      |.+..|++++|+|+|....++...  .+.+..    +.+..+.. +++.+++
T Consensus       285 ~~~--~~~~~~l~~ADlvI~rS------Gt~T~E~a~lg~P~Ilip~~~~q~na~~~~~~~~l~g~~~~l~~~~~~~l~~  356 (396)
T TIGR03492       285 LGR--GAFAEILHWADLGIAMA------GTATEQAVGLGKPVIQLPGKGPQFTYGFAEAQSRLLGGSVFLASKNPEQAAQ  356 (396)
T ss_pred             ech--HhHHHHHHhCCEEEECc------CHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhhHhhcCCEEecCCCCHHHHHH
Confidence            554  68999999999999754      345699999999999987433210  111221    23444444 8899999


Q ss_pred             HHHHHHHcCcHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Q 039338          441 TLEAAVSEGPMRLAQRGEACRQYAASMFTANKMALAYE  478 (493)
Q Consensus       441 ~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~  478 (493)
                      ++.++++| ++.+++|.+++++...+....+++++.+.
T Consensus       357 ~l~~ll~d-~~~~~~~~~~~~~~lg~~~a~~~ia~~i~  393 (396)
T TIGR03492       357 VVRQLLAD-PELLERCRRNGQERMGPPGASARIAESIL  393 (396)
T ss_pred             HHHHHHcC-HHHHHHHHHHHHHhcCCCCHHHHHHHHHH
Confidence            99999998 88888887555444433334455554443

This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.

>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]

Probab=99.43  E-value=6.9e-10  Score=104.52  Aligned_cols=312  Identities=17%  Similarity=0.140  Sum_probs=192.1

Q ss_pred             chHHHHHHHHHHHHhC--CCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCCCccccccchHHHHHHhcCCC
Q 039338          101 GMERHAHTLHVALARR--GHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEADKWRYSKGWEQFDEENQREP  178 (493)
Q Consensus       101 G~~~~~~~l~~~L~~~--G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (493)
                      |-...+..|.++|.++  ++.+.+-+.....  ......      .........+.+.     +.   .....+.++..+
T Consensus        60 GEv~a~~pLv~~l~~~~P~~~ilvTt~T~Tg--~e~a~~------~~~~~v~h~YlP~-----D~---~~~v~rFl~~~~  123 (419)
T COG1519          60 GEVLAALPLVRALRERFPDLRILVTTMTPTG--AERAAA------LFGDSVIHQYLPL-----DL---PIAVRRFLRKWR  123 (419)
T ss_pred             hHHHHHHHHHHHHHHhCCCCCEEEEecCccH--HHHHHH------HcCCCeEEEecCc-----Cc---hHHHHHHHHhcC
Confidence            4466788999999998  6666665544333  111111      0011112222221     11   244555566778


Q ss_pred             CcEEEeCcc--c---hhHHhhhccCcEEEEeccchhhhhhhhhhhhhhcCCCCccchHhHhHHHHHHHHHHHHHHhhccC
Q 039338          179 FDVVHSESV--A---LPHWLARNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQGVMLKVLNEIRFFNKY  253 (493)
Q Consensus       179 ~DiI~~~~~--~---~~~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (493)
                      ||++++...  +   +.....+++| .+..---+...+                      ..-+.++.++.  +.++++.
T Consensus       124 P~l~Ii~EtElWPnli~e~~~~~~p-~~LvNaRLS~rS----------------------~~~y~k~~~~~--~~~~~~i  178 (419)
T COG1519         124 PKLLIIMETELWPNLINELKRRGIP-LVLVNARLSDRS----------------------FARYAKLKFLA--RLLFKNI  178 (419)
T ss_pred             CCEEEEEeccccHHHHHHHHHcCCC-EEEEeeeechhh----------------------hHHHHHHHHHH--HHHHHhc
Confidence            998776422  2   2222345667 443332221111                      01112222222  2668899


Q ss_pred             CeEEEcChhHHHHHHHHhCCCCCcEEEecCC-ccCCCccCCcccchhhhhhhCCCCCCcEEEEEecccccccChHHHHHH
Q 039338          254 AHHVAISDSCGEMLRDVYQIPSERVHVILNG-INENEYGVDLSLGQSFRSRIGIPKNASLVLGVAGRLVKDKGHPLLHEA  332 (493)
Q Consensus       254 d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ng-vd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Gr~~~~Kg~~~ll~a  332 (493)
                      |.|++-|+..++.+.+ .|.++  +.+..|- .|.+.-..........|..++.+  . .+++.++..  ...-+.++++
T Consensus       179 ~li~aQse~D~~Rf~~-LGa~~--v~v~GNlKfd~~~~~~~~~~~~~~r~~l~~~--r-~v~iaaSTH--~GEeei~l~~  250 (419)
T COG1519         179 DLILAQSEEDAQRFRS-LGAKP--VVVTGNLKFDIEPPPQLAAELAALRRQLGGH--R-PVWVAASTH--EGEEEIILDA  250 (419)
T ss_pred             ceeeecCHHHHHHHHh-cCCcc--eEEecceeecCCCChhhHHHHHHHHHhcCCC--C-ceEEEecCC--CchHHHHHHH
Confidence            9999999999999998 67643  6776662 22222112222345567777654  3 345466652  2334558899


Q ss_pred             HHHHHhhCCCeEEEEEeCCCcHH-----HHhhhc---------------CcEEEecCCCHHHHHHHHHHcCEEEeC-CCC
Q 039338          333 FSKLMVKYPDVYLIVAGSGPWEQ-----RYKDFG---------------HQVLVMGSMSPAELRAFYNAIDIFVNP-TLR  391 (493)
Q Consensus       333 ~~~l~~~~~~~~l~i~G~g~~~~-----~~~~l~---------------~~V~~~g~~~~~~~~~~~~~adv~v~p-s~~  391 (493)
                      ++.+++++||..++++-.-+++-     .+++.+               .+|.+...+  .|+..+|..+|+.++- |..
T Consensus       251 ~~~l~~~~~~~llIlVPRHpERf~~v~~l~~~~gl~~~~rS~~~~~~~~tdV~l~Dtm--GEL~l~y~~adiAFVGGSlv  328 (419)
T COG1519         251 HQALKKQFPNLLLILVPRHPERFKAVENLLKRKGLSVTRRSQGDPPFSDTDVLLGDTM--GELGLLYGIADIAFVGGSLV  328 (419)
T ss_pred             HHHHHhhCCCceEEEecCChhhHHHHHHHHHHcCCeEEeecCCCCCCCCCcEEEEecH--hHHHHHHhhccEEEECCccc
Confidence            99999999999999998755432     122211               366666676  6999999999998774 434


Q ss_pred             CCCCChHHHHHHHcCCcEEecCC----CCCccceeeeCcceEEECCCHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHh
Q 039338          392 PQGLDLTLMEAMMSGKPVMASRF----PSIKGTIVVDDEFGFMFAPNVESLHKTLEAAVSEGPMRLAQRGEACRQYAASM  467 (493)
Q Consensus       392 ~eg~~~~~~EAm~~G~PvI~s~~----~~~~~e~v~~~~~G~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~  467 (493)
                      +.| |--++|+.++|+|||.-..    ..+. +-+.+.+.|+.++ |.+.+.+++..++.| ++.+++|++++.+.+.++
T Consensus       329 ~~G-GHN~LEpa~~~~pvi~Gp~~~Nf~ei~-~~l~~~ga~~~v~-~~~~l~~~v~~l~~~-~~~r~~~~~~~~~~v~~~  404 (419)
T COG1519         329 PIG-GHNPLEPAAFGTPVIFGPYTFNFSDIA-ERLLQAGAGLQVE-DADLLAKAVELLLAD-EDKREAYGRAGLEFLAQN  404 (419)
T ss_pred             CCC-CCChhhHHHcCCCEEeCCccccHHHHH-HHHHhcCCeEEEC-CHHHHHHHHHHhcCC-HHHHHHHHHHHHHHHHHh
Confidence            344 7789999999999998642    2223 2344556788887 678888888888887 999999999999998774

>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences

Probab=99.42  E-value=4.9e-11  Score=123.56  Aligned_cols=231  Identities=19%  Similarity=0.243  Sum_probs=164.0

Q ss_pred             HhhccCCeEEEcChhHHHHHHHHh-----CCC--CCcEEEecCCccCCCcc-CC--------------------------
Q 039338          248 RFFNKYAHHVAISDSCGEMLRDVY-----QIP--SERVHVILNGINENEYG-VD--------------------------  293 (493)
Q Consensus       248 ~~~~~~d~ii~~S~~~~~~~~~~~-----~~~--~~~v~vi~ngvd~~~~~-~~--------------------------  293 (493)
                      ..+..++.+.++|+-..+..++.+     |.+  ..++.-|-|||+...|. +.                          
T Consensus       347 laL~~S~~vNgVS~lHg~vsr~mf~~~~~g~p~~~~~i~~ITNGVh~~~W~~P~~~~l~~~~~g~~w~~~~~~~~~~~~~  426 (778)
T cd04299         347 LALRLAQRANGVSRLHGEVSREMFAGLWPGFPVEEVPIGHVTNGVHVPTWVAPEMRELYDRYLGGDWRERPTDPELWEAV  426 (778)
T ss_pred             HHHHhcCeeeeecHHHHHHHHHHhhhhhccCCcccCceeceeCCcchhhhcCHHHHHHHHHhcCcchhhccchHHHHhhh
Confidence            345678999999997754444422     222  34689999999998776 21                          


Q ss_pred             ---ccc---------chh----hhhhh-----------------C--CCCCCcEEEEEecccccccChHHHHHHHHHHHh
Q 039338          294 ---LSL---------GQS----FRSRI-----------------G--IPKNASLVLGVAGRLVKDKGHPLLHEAFSKLMV  338 (493)
Q Consensus       294 ---~~~---------~~~----~r~~~-----------------~--i~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~l~~  338 (493)
                         ++.         +..    +++.+                 +  ++++. +++++++|+..+|+.++++..+.++.+
T Consensus       427 ~~i~d~~lw~~K~~~K~~L~~~v~~~~~~~~~~~g~~~~~~~~~~~~ldpd~-ltigfarRfa~YKR~~Lil~dl~rl~~  505 (778)
T cd04299         427 DDIPDEELWEVRQQLRRRLIEFVRRRLRRQWLRRGASAEEIGEADDVLDPNV-LTIGFARRFATYKRATLLLRDPERLKR  505 (778)
T ss_pred             cCCCcHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCchhhhhhcCCccCCCc-cEEeeeecchhhhhHHHHHHHHHHHHH
Confidence               010         011    11111                 2  23333 789999999999999999999888755


Q ss_pred             hC----CCeEEEEEeCCCc-----HHHHh---hh------cCcEEEecCCCHHHHHHHHHHcCEEEeCCCC-CCCCChHH
Q 039338          339 KY----PDVYLIVAGSGPW-----EQRYK---DF------GHQVLVMGSMSPAELRAFYNAIDIFVNPTLR-PQGLDLTL  399 (493)
Q Consensus       339 ~~----~~~~l~i~G~g~~-----~~~~~---~l------~~~V~~~g~~~~~~~~~~~~~adv~v~ps~~-~eg~~~~~  399 (493)
                      -.    .+++++++|.+..     ++.++   ++      ..+|.|+...+-+--..+++.||+.++||.+ .|.+|++-
T Consensus       506 il~~~~~pvQ~IfaGKAhP~d~~gK~iIk~i~~~a~~p~~~~kVvfle~Yd~~lA~~LvaG~DvwLn~prrp~EAsGTSg  585 (778)
T cd04299         506 LLNDPERPVQFIFAGKAHPADEPGKELIQEIVEFSRRPEFRGRIVFLEDYDMALARHLVQGVDVWLNTPRRPLEASGTSG  585 (778)
T ss_pred             HhhCCCCCeEEEEEEecCccchHHHHHHHHHHHHHhCcCCCCcEEEEcCCCHHHHHHHHhhhhhcccCCCCCCCCCccch
Confidence            11    3699999998641     12222   22      2589999888877777899999999999961 39999999


Q ss_pred             HHHHHcCCcEEecCCCCCccceeeeCcceEEECC-------------CHHHHHHHHHHHHH----c-----CcHHHHHHH
Q 039338          400 MEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAP-------------NVESLHKTLEAAVS----E-----GPMRLAQRG  457 (493)
Q Consensus       400 ~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~~-------------d~~~l~~~i~~ll~----~-----~~~~~~~~~  457 (493)
                      +-||.-|.+-+++--|... |.. ++.|||.+.+             |.++|-+.|++.+.    +     .+..+.+|.
T Consensus       586 MKA~~NG~LnlSvlDGww~-E~~-~g~nGwaig~~~~~~~~~~~d~~da~~Ly~~Le~~i~p~yy~r~~~g~p~~W~~~~  663 (778)
T cd04299         586 MKAALNGGLNLSVLDGWWD-EGY-DGENGWAIGDGDEYEDDEYQDAEEAEALYDLLENEVIPLFYDRDEGGYPPGWVAMM  663 (778)
T ss_pred             HHHHHcCCeeeecccCccc-ccc-CCCCceEeCCCccccChhhcchhhHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHH
Confidence            9999999999999888887 554 7899999975             24455566654333    2     145677777


Q ss_pred             HHHHHHHHHhcCHHHHHHHHHHHH
Q 039338          458 EACRQYAASMFTANKMALAYERLF  481 (493)
Q Consensus       458 ~~~~~~~~~~fs~~~~~~~~~~~~  481 (493)
                      +++.+.+...|||++++++|.+-|
T Consensus       664 k~sm~~~~p~fs~~Rmv~eY~~~~  687 (778)
T cd04299         664 KHSMATLGPRFSAERMVREYVERF  687 (778)
T ss_pred             HHHHHhcccCCCHHHHHHHHHHHh
Confidence            777777777899999999996554

Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea.

>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]

Probab=99.36  E-value=2.2e-10  Score=121.14  Aligned_cols=276  Identities=15%  Similarity=0.196  Sum_probs=191.0

Q ss_pred             cEEEeCccc---hhHHhhhccC--cEEEEeccchhhhhhhhhhhhhhcCCCCccchHhHhHHHHHHHHHHHHHHhhccCC
Q 039338          180 DVVHSESVA---LPHWLARNVT--NLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQGVMLKVLNEIRFFNKYA  254 (493)
Q Consensus       180 DiI~~~~~~---~~~~~~~~~p--~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  254 (493)
                      |+|.+|.+.   ++.++.+..|  ++.+.+|-+++.   ++++..+.             ....       -.+-+-.||
T Consensus       203 d~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPFPs---~eifr~LP-------------~r~e-------iL~glL~aD  259 (854)
T PLN02205        203 DFVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPS---SEIYKTLP-------------IREE-------LLRALLNSD  259 (854)
T ss_pred             CEEEEeCchhhHHHHHHHhhCCCCcEEEEecCCCCC---hHHHhhCC-------------cHHH-------HHHHHhcCC
Confidence            899999874   4555555444  377788876543   22332221             1111       113345789


Q ss_pred             eEEEcChhHHHHHHH----HhCCC---------------CCcEEEecCCccCCCccCCcc------cchhhhhhhCCCCC
Q 039338          255 HHVAISDSCGEMLRD----VYQIP---------------SERVHVILNGINENEYGVDLS------LGQSFRSRIGIPKN  309 (493)
Q Consensus       255 ~ii~~S~~~~~~~~~----~~~~~---------------~~~v~vi~ngvd~~~~~~~~~------~~~~~r~~~~i~~~  309 (493)
                      .|=+.+...+..+.+    ..|..               .-++.+.|-|||...+.....      ....++++++  ..
T Consensus       260 lIGFht~~yar~Fl~~~~r~lgl~~~~~~g~~~~~~~Gr~v~v~~~PigId~~~~~~~~~~~~~~~~~~~l~~~~~--~~  337 (854)
T PLN02205        260 LIGFHTFDYARHFLSCCSRMLGLSYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLPETEAKVKELIKQFC--DQ  337 (854)
T ss_pred             eEEecCHHHHHHHHHHHHHHhCCcccCCCcceeEEECCcEEEEEEEeCeEcHHHHHHHhcChhHHHHHHHHHHHhc--cC
Confidence            998888877776554    22321               123667788999887744221      1233445543  11


Q ss_pred             CcEEEEEecccccccChHHHHHHHHHHHhhCCCe----EEEEEeC-----CCcHHHHh----hh--------c----CcE
Q 039338          310 ASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDV----YLIVAGS-----GPWEQRYK----DF--------G----HQV  364 (493)
Q Consensus       310 ~~~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~----~l~i~G~-----g~~~~~~~----~l--------~----~~V  364 (493)
                      ++.+|+-+.|++..||+..=+.|+.++.+++|++    .|+-+..     ++..+.++    ++        +    ..|
T Consensus       338 ~~~~ilgVDrlD~~KGi~~kl~A~e~~L~~~P~~~gkvvlvQia~psr~~~~~y~~~~~ev~~~v~rIN~~fg~~~~~Pv  417 (854)
T PLN02205        338 DRIMLLGVDDMDIFKGISLKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEVQAETHSTVKRINETFGKPGYDPI  417 (854)
T ss_pred             CCEEEEEccCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCCcccHHHHHHHHHHHHHHHHHHhhcCCCCCceE
Confidence            2367779999999999999999999999988854    4554442     12222121    11        1    235


Q ss_pred             EEe-cCCCHHHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcCC-------------------cEEecCCCCCccceeee
Q 039338          365 LVM-GSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGK-------------------PVMASRFPSIKGTIVVD  424 (493)
Q Consensus       365 ~~~-g~~~~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G~-------------------PvI~s~~~~~~~e~v~~  424 (493)
                      .++ ..++.+++.++|+.||+++.++.+ +|..++..|+.+|..                   .+|.|...|...++   
T Consensus       418 ~~~~~~~~~~e~~aly~~ADv~lVT~lR-DGMNLva~Eyia~~~~~~~~~~~~~~~~~~~~~gvLiLSEfaGaa~~L---  493 (854)
T PLN02205        418 VLIDAPLKFYERVAYYVVAECCLVTAVR-DGMNLIPYEYIISRQGNEKLDKLLGLEPSTPKKSMLVVSEFIGCSPSL---  493 (854)
T ss_pred             EEEecCCCHHHHHHHHHhccEEEecccc-ccccccchheeEEccCccccccccccccccCCCCceEeeeccchhHHh---
Confidence            554 678999999999999999999988 999999999999864                   36778777766333   


Q ss_pred             CcceEEECC-CHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhh
Q 039338          425 DEFGFMFAP-NVESLHKTLEAAVSEGPMRLAQRGEACRQYAASMFTANKMALAYERLFLCIKN  486 (493)
Q Consensus       425 ~~~G~~~~~-d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~i~~  486 (493)
                       ...+.++| |+++++++|.+++..+.++++..-++.++++.. ++....++.+.+-++...+
T Consensus       494 -~~Ai~VNP~d~~~~a~ai~~AL~m~~~Er~~R~~~~~~~v~~-~d~~~W~~~fl~~l~~~~~  554 (854)
T PLN02205        494 -SGAIRVNPWNIDAVADAMDSALEMAEPEKQLRHEKHYRYVST-HDVGYWARSFLQDLERTCR  554 (854)
T ss_pred             -CcCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhh-CCHHHHHHHHHHHHHHHHH
Confidence             24799999 999999999999999878888888888888877 6988888888777766543

>COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism]

Probab=99.36  E-value=3.4e-10  Score=110.05  Aligned_cols=273  Identities=18%  Similarity=0.228  Sum_probs=187.9

Q ss_pred             CcEEEeCccc---hhHHhhhccC--cEEEEeccchhhhhhhhhhhhhhcCCCCccchHhHhHHHHHHHHHHHHHHhhccC
Q 039338          179 FDVVHSESVA---LPHWLARNVT--NLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQGVMLKVLNEIRFFNKY  253 (493)
Q Consensus       179 ~DiI~~~~~~---~~~~~~~~~p--~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (493)
                      =|+|.+|.+.   ++..+...+|  ++...+|-+++.   ++++..+                    ....+-..-+-.|
T Consensus       148 gDiIWVhDYhL~L~P~mlR~~~~~~~IgfFlHiPfPs---sEvfr~l--------------------P~r~eIl~gll~~  204 (486)
T COG0380         148 GDIIWVHDYHLLLVPQMLRERIPDAKIGFFLHIPFPS---SEVFRCL--------------------PWREEILEGLLGA  204 (486)
T ss_pred             CCEEEEEechhhhhHHHHHHhCCCceEEEEEeCCCCC---HHHHhhC--------------------chHHHHHHHhhcC
Confidence            3999999874   4445555554  367777866543   2333332                    1111111334578


Q ss_pred             CeEEEcChhHHHHHHHHh----C-------------CCCCcEEEecCCccCCCccCCccc------chhhhhhhCCCCCC
Q 039338          254 AHHVAISDSCGEMLRDVY----Q-------------IPSERVHVILNGINENEYGVDLSL------GQSFRSRIGIPKNA  310 (493)
Q Consensus       254 d~ii~~S~~~~~~~~~~~----~-------------~~~~~v~vi~ngvd~~~~~~~~~~------~~~~r~~~~i~~~~  310 (493)
                      |.|-+.++..+..+.+..    +             -...++..+|-|+|+..+......      ..++++.++  .+.
T Consensus       205 dligFqt~~y~~nF~~~~~r~~~~~~~~~~~~~~~~~~~v~v~a~PIgID~~~~~~~~~~~~v~~~~~el~~~~~--~~~  282 (486)
T COG0380         205 DLIGFQTESYARNFLDLCSRLLGVTGDADIRFNGADGRIVKVGAFPIGIDPEEFERALKSPSVQEKVLELKAELG--RNK  282 (486)
T ss_pred             CeeEecCHHHHHHHHHHHHHhccccccccccccccCCceEEEEEEeeecCHHHHHHhhcCCchhhHHHHHHHHhc--CCc
Confidence            888888887776554321    1             011457778999999877543211      233444443  223


Q ss_pred             cEEEEEecccccccChHHHHHHHHHHHhhCC----CeEEEEEeCCC---cHH------HHhhh--------c----CcEE
Q 039338          311 SLVLGVAGRLVKDKGHPLLHEAFSKLMVKYP----DVYLIVAGSGP---WEQ------RYKDF--------G----HQVL  365 (493)
Q Consensus       311 ~~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~----~~~l~i~G~g~---~~~------~~~~l--------~----~~V~  365 (493)
                       .+|+.+.|++..||+..=+.|+.++.+++|    ++.++-++...   ..+      .++++        +    ..|.
T Consensus       283 -kiivgvDRlDy~kGi~~rl~Afe~lL~~~Pe~~~kvvliQi~~pSr~~v~~y~~~~~~i~~~V~rIN~~fG~~~~~Pv~  361 (486)
T COG0380         283 -KLIVGVDRLDYSKGIPQRLLAFERLLEEYPEWRGKVVLLQIAPPSREDVEEYQALRLQIEELVGRINGEFGSLSWTPVH  361 (486)
T ss_pred             -eEEEEehhcccccCcHHHHHHHHHHHHhChhhhCceEEEEecCCCccccHHHHHHHHHHHHHHHHHHhhcCCCCcceeE
Confidence             567789999999999999999999998886    45565555421   111      11111        1    2344


Q ss_pred             E-ecCCCHHHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcCC----cEEecCCCCCccceeeeCcceEEECC-CHHHHH
Q 039338          366 V-MGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGK----PVMASRFPSIKGTIVVDDEFGFMFAP-NVESLH  439 (493)
Q Consensus       366 ~-~g~~~~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G~----PvI~s~~~~~~~e~v~~~~~G~~~~~-d~~~l~  439 (493)
                      + .-.++.+++..+|..||+++.++++ +|..++..|+.+|.-    +.|.|...|...+ +.   ..++++| |.++++
T Consensus       362 ~l~~~~~~~~l~al~~~aDv~lVtplr-DGMNLvakEyVa~q~~~~G~LiLSeFaGaa~~-L~---~AliVNP~d~~~va  436 (486)
T COG0380         362 YLHRDLDRNELLALYRAADVMLVTPLR-DGMNLVAKEYVAAQRDKPGVLILSEFAGAASE-LR---DALIVNPWDTKEVA  436 (486)
T ss_pred             EEeccCCHHHHHHHHhhhceeeecccc-ccccHHHHHHHHhhcCCCCcEEEeccccchhh-hc---cCEeECCCChHHHH
Confidence            4 4458999999999999999999987 999999999999854    7788888777633 32   2899999 999999


Q ss_pred             HHHHHHHHcCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 039338          440 KTLEAAVSEGPMRLAQRGEACRQYAASMFTANKMALAYERLFLC  483 (493)
Q Consensus       440 ~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~  483 (493)
                      ++|.+.+..+.+++++.-+..++.+.+ ++....+..+.+-+..
T Consensus       437 ~ai~~AL~m~~eEr~~r~~~~~~~v~~-~d~~~W~~~fl~~la~  479 (486)
T COG0380         437 DAIKRALTMSLEERKERHEKLLKQVLT-HDVARWANSFLDDLAQ  479 (486)
T ss_pred             HHHHHHhcCCHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHh
Confidence            999999999888888888888888877 6888888887666554

>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.34  E-value=2.6e-10  Score=106.47  Aligned_cols=354  Identities=14%  Similarity=0.128  Sum_probs=212.7

Q ss_pred             CCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCC-CEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCCC
Q 039338           81 KFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRG-HRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEAD  159 (493)
Q Consensus        81 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G-~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (493)
                      +..|||++|...=|.       -.-+..+++++.+.+ .+..|+.+.... +....+..-..  .....+.+......++
T Consensus         1 m~~~Kv~~I~GTRPE-------~iKmapli~~~~~~~~~~~~vi~TGQH~-d~em~~~~le~--~~i~~pdy~L~i~~~~   70 (383)
T COG0381           1 MKMLKVLTIFGTRPE-------AIKMAPLVKALEKDPDFELIVIHTGQHR-DYEMLDQVLEL--FGIRKPDYDLNIMKPG   70 (383)
T ss_pred             CCceEEEEEEecCHH-------HHHHhHHHHHHHhCCCCceEEEEecccc-cHHHHHHHHHH--hCCCCCCcchhccccC
Confidence            346899999874332       334778999999987 888777766554 11111110000  1111122222222111


Q ss_pred             c---cccccchHHHHHHhcCCCCcEEEeCcc---chh---HHhhhccCcEEEEeccchhhhhhhhhhhhhhcCCCCccch
Q 039338          160 K---WRYSKGWEQFDEENQREPFDVVHSESV---ALP---HWLARNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSL  230 (493)
Q Consensus       160 ~---~~~~~~~~~~~~~~~~~~~DiI~~~~~---~~~---~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~  230 (493)
                      .   -.....+..+.+.+.+.+||+|.+|+-   .+.   +....++| +...-.|.......   +      |.     
T Consensus        71 ~tl~~~t~~~i~~~~~vl~~~kPD~VlVhGDT~t~lA~alaa~~~~Ip-V~HvEAGlRt~~~~---~------PE-----  135 (383)
T COG0381          71 QTLGEITGNIIEGLSKVLEEEKPDLVLVHGDTNTTLAGALAAFYLKIP-VGHVEAGLRTGDLY---F------PE-----  135 (383)
T ss_pred             CCHHHHHHHHHHHHHHHHHhhCCCEEEEeCCcchHHHHHHHHHHhCCc-eEEEecccccCCCC---C------cH-----
Confidence            1   122345566777778999999999964   222   22334566 55555553211000   0      00     


Q ss_pred             HhHhHHHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCC--cccchhhhhh-hCCC
Q 039338          231 AFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVD--LSLGQSFRSR-IGIP  307 (493)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~--~~~~~~~r~~-~~i~  307 (493)
                      ...+.+..            .-++..+++++..++.+.+ -|.+.++++++.|.+-.......  .......... ++..
T Consensus       136 E~NR~l~~------------~~S~~hfapte~ar~nLl~-EG~~~~~IfvtGnt~iDal~~~~~~~~~~~~~~~~~~~~~  202 (383)
T COG0381         136 EINRRLTS------------HLSDLHFAPTEIARKNLLR-EGVPEKRIFVTGNTVIDALLNTRDRVLEDSKILAKGLDDK  202 (383)
T ss_pred             HHHHHHHH------------HhhhhhcCChHHHHHHHHH-cCCCccceEEeCChHHHHHHHHHhhhccchhhHHhhhccc
Confidence            00111111            2356679999999999988 58998899999997533221110  0101111112 3333


Q ss_pred             CCCcEEEEEeccccc-ccChHHHHHHHHHHHhhCCCeEEEEEeCCC--cHHH-Hhhhc--CcEEEecCCCHHHHHHHHHH
Q 039338          308 KNASLVLGVAGRLVK-DKGHPLLHEAFSKLMVKYPDVYLIVAGSGP--WEQR-YKDFG--HQVLVMGSMSPAELRAFYNA  381 (493)
Q Consensus       308 ~~~~~~i~~~Gr~~~-~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~--~~~~-~~~l~--~~V~~~g~~~~~~~~~~~~~  381 (493)
                       +++++++.+=|-.. .+++..+++++.++.++++++.++.--...  .++. .+.|+  ++|.++.++...+...++..
T Consensus       203 -~~~~iLvT~HRreN~~~~~~~i~~al~~i~~~~~~~~viyp~H~~~~v~e~~~~~L~~~~~v~li~pl~~~~f~~L~~~  281 (383)
T COG0381         203 -DKKYILVTAHRRENVGEPLEEICEALREIAEEYPDVIVIYPVHPRPRVRELVLKRLKNVERVKLIDPLGYLDFHNLMKN  281 (383)
T ss_pred             -cCcEEEEEcchhhcccccHHHHHHHHHHHHHhCCCceEEEeCCCChhhhHHHHHHhCCCCcEEEeCCcchHHHHHHHHh
Confidence             33366666666543 488999999999999998888777655432  2222 23455  57999999999999999999


Q ss_pred             cCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCccceeeeCcceEEECCCHHHHHHHHHHHHHcCcHHHHHHHHHHH
Q 039338          382 IDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAPNVESLHKTLEAAVSEGPMRLAQRGEACR  461 (493)
Q Consensus       382 adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~  461 (493)
                      |-+++--|      |...=||-..|+||++-+...-..|.+ +.+.-.++..+.+.+.+++..++++ ++.+++|+...-
T Consensus       282 a~~iltDS------GgiqEEAp~lg~Pvl~lR~~TERPE~v-~agt~~lvg~~~~~i~~~~~~ll~~-~~~~~~m~~~~n  353 (383)
T COG0381         282 AFLILTDS------GGIQEEAPSLGKPVLVLRDTTERPEGV-EAGTNILVGTDEENILDAATELLED-EEFYERMSNAKN  353 (383)
T ss_pred             ceEEEecC------CchhhhHHhcCCcEEeeccCCCCccce-ecCceEEeCccHHHHHHHHHHHhhC-hHHHHHHhcccC
Confidence            98887533      347889999999999987655443544 4445666666899999999999999 788777765544


Q ss_pred             HHHHHhcCHHHHHHHHHHHHH
Q 039338          462 QYAASMFTANKMALAYERLFL  482 (493)
Q Consensus       462 ~~~~~~fs~~~~~~~~~~~~~  482 (493)
                      .+.... +-+++++.+...+.
T Consensus       354 pYgdg~-as~rIv~~l~~~~~  373 (383)
T COG0381         354 PYGDGN-ASERIVEILLNYFD  373 (383)
T ss_pred             CCcCcc-hHHHHHHHHHHHhh
Confidence            333332 34444444444333

>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin

Probab=99.34  E-value=1.9e-10  Score=114.24  Aligned_cols=151  Identities=19%  Similarity=0.130  Sum_probs=95.1

Q ss_pred             CCCcEEEEEeccccc---ccChHHHHHHHHHHHhhCCCeEE-EEEeCCCcHHHHhhhcCcEEEecCCCHHHHHHHHHHcC
Q 039338          308 KNASLVLGVAGRLVK---DKGHPLLHEAFSKLMVKYPDVYL-IVAGSGPWEQRYKDFGHQVLVMGSMSPAELRAFYNAID  383 (493)
Q Consensus       308 ~~~~~~i~~~Gr~~~---~Kg~~~ll~a~~~l~~~~~~~~l-~i~G~g~~~~~~~~l~~~V~~~g~~~~~~~~~~~~~ad  383 (493)
                      ++++.+++..|+...   .+....+++++..+     +.++ +.+|......  ..+.++|.+.+++++.   .++..||
T Consensus       237 ~~~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~-----~~~~i~~~g~~~~~~--~~~~~~v~~~~~~p~~---~ll~~~d  306 (401)
T cd03784         237 AGRPPVYVGFGSMVVRDPEALARLDVEAVATL-----GQRAILSLGWGGLGA--EDLPDNVRVVDFVPHD---WLLPRCA  306 (401)
T ss_pred             CCCCcEEEeCCCCcccCHHHHHHHHHHHHHHc-----CCeEEEEccCccccc--cCCCCceEEeCCCCHH---HHhhhhh
Confidence            345577778888754   23334455555543     3444 4456443322  3445899999999755   5688899


Q ss_pred             EEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCC----ccceeeeCcceEEECC---CHHHHHHHHHHHHHcCcHHHHHH
Q 039338          384 IFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSI----KGTIVVDDEFGFMFAP---NVESLHKTLEAAVSEGPMRLAQR  456 (493)
Q Consensus       384 v~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~----~~e~v~~~~~G~~~~~---d~~~l~~~i~~ll~~~~~~~~~~  456 (493)
                      ++|.   + .| ..++.||+++|+|+|+....+-    . +.+.+.+.|..+..   +++++.+++.+++++ + .+++.
T Consensus       307 ~~I~---h-gG-~~t~~eal~~GvP~v~~P~~~dQ~~~a-~~~~~~G~g~~l~~~~~~~~~l~~al~~~l~~-~-~~~~~  378 (401)
T cd03784         307 AVVH---H-GG-AGTTAAALRAGVPQLVVPFFGDQPFWA-ARVAELGAGPALDPRELTAERLAAALRRLLDP-P-SRRRA  378 (401)
T ss_pred             eeee---c-CC-chhHHHHHHcCCCEEeeCCCCCcHHHH-HHHHHCCCCCCCCcccCCHHHHHHHHHHHhCH-H-HHHHH
Confidence            9995   2 33 4699999999999999976542    1 23455667777764   689999999999885 3 33444


Q ss_pred             HHHHHHHHHHhcCHHHHHHHH
Q 039338          457 GEACRQYAASMFTANKMALAY  477 (493)
Q Consensus       457 ~~~~~~~~~~~fs~~~~~~~~  477 (493)
                      .+.+.+. ++.-..+..++.+
T Consensus       379 ~~~~~~~-~~~~g~~~~~~~i  398 (401)
T cd03784         379 AALLRRI-REEDGVPSAADVI  398 (401)
T ss_pred             HHHHHHH-HhccCHHHHHHHH
Confidence            3333332 2223444444444

Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.

>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]

Probab=99.29  E-value=9.9e-11  Score=108.94  Aligned_cols=323  Identities=16%  Similarity=0.138  Sum_probs=190.4

Q ss_pred             eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEe---ecCCCCc
Q 039338           84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHF---HEGEADK  160 (493)
Q Consensus        84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~  160 (493)
                      |||++++.+      .+| ...-..|.++|.++=-+|.++...++.+.....+..-       +...+..   ....+..
T Consensus         2 ~ki~i~AGE------~SG-DllGa~LikaLk~~~~~~efvGvgG~~m~aeG~~sl~-------~~~elsvmGf~EVL~~l   67 (381)
T COG0763           2 LKIALSAGE------ASG-DLLGAGLIKALKARYPDVEFVGVGGEKMEAEGLESLF-------DMEELSVMGFVEVLGRL   67 (381)
T ss_pred             ceEEEEecc------cch-hhHHHHHHHHHHhhCCCeEEEEeccHHHHhccCcccc-------CHHHHHHhhHHHHHHHH
Confidence            689999874      344 4456779999988733888888776663222211100       0000000   0000111


Q ss_pred             cccccchHHHHHHhcCCCCcEEEeCcc-----chhHHhhhccCcEEEEeccchhhhhhhhhhhhhhcCCCCccchHhHhH
Q 039338          161 WRYSKGWEQFDEENQREPFDVVHSESV-----ALPHWLARNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKS  235 (493)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~DiI~~~~~-----~~~~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (493)
                      ....+..+.+.+.+...+||++++-+.     .+...+.+..| .+-++|-+.+..|.                     +
T Consensus        68 p~llk~~~~~~~~i~~~kpD~~i~IDsPdFnl~vak~lrk~~p-~i~iihYV~PsVWA---------------------W  125 (381)
T COG0763          68 PRLLKIRRELVRYILANKPDVLILIDSPDFNLRVAKKLRKAGP-KIKIIHYVSPSVWA---------------------W  125 (381)
T ss_pred             HHHHHHHHHHHHHHHhcCCCEEEEeCCCCCchHHHHHHHHhCC-CCCeEEEECcceee---------------------e
Confidence            122233344444445889999887543     23334444444 34444433221110                     0


Q ss_pred             HHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCCCCCCcEEEE
Q 039338          236 LQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLG  315 (493)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~  315 (493)
                      -.++.      ....+.+|++.++=++..+.+.+ +|.+   ++.|.++.-...  +-..+++..|+++|++.+.+.+.+
T Consensus       126 r~~Ra------~~i~~~~D~lLailPFE~~~y~k-~g~~---~~yVGHpl~d~i--~~~~~r~~ar~~l~~~~~~~~lal  193 (381)
T COG0763         126 RPKRA------VKIAKYVDHLLAILPFEPAFYDK-FGLP---CTYVGHPLADEI--PLLPDREAAREKLGIDADEKTLAL  193 (381)
T ss_pred             chhhH------HHHHHHhhHeeeecCCCHHHHHh-cCCC---eEEeCChhhhhc--cccccHHHHHHHhCCCCCCCeEEE
Confidence            00011      13345789999999999999988 5653   667777654332  122334568999999999988888


Q ss_pred             Eeccccc--ccChHHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhhhc--CcE-EEecCCCHHHHHHHHHHcCEEEeCCC
Q 039338          316 VAGRLVK--DKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDFG--HQV-LVMGSMSPAELRAFYNAIDIFVNPTL  390 (493)
Q Consensus       316 ~~Gr~~~--~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~l~--~~V-~~~g~~~~~~~~~~~~~adv~v~ps~  390 (493)
                      ..|+=..  .+-...+.+++.++++++|+.++++--.....+.++...  ..+ ...-.+...+-.+.+.+||+.+..| 
T Consensus       194 LPGSR~sEI~rl~~~f~~a~~~l~~~~~~~~~vlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~aD~al~aS-  272 (381)
T COG0763         194 LPGSRRSEIRRLLPPFVQAAQELKARYPDLKFVLPLVNAKYRRIIEEALKWEVAGLSLILIDGEKRKAFAAADAALAAS-  272 (381)
T ss_pred             ecCCcHHHHHHHHHHHHHHHHHHHhhCCCceEEEecCcHHHHHHHHHHhhccccCceEEecCchHHHHHHHhhHHHHhc-
Confidence            8886432  456788899999999999999999977654433333221  111 1222233357889999999999755 


Q ss_pred             CCCCCChHHHHHHHcCCcEEecC-----------------CCCCccceeeeCcc-eEEE-CC-CHHHHHHHHHHHHHcCc
Q 039338          391 RPQGLDLTLMEAMMSGKPVMASR-----------------FPSIKGTIVVDDEF-GFMF-AP-NVESLHKTLEAAVSEGP  450 (493)
Q Consensus       391 ~~eg~~~~~~EAm~~G~PvI~s~-----------------~~~~~~e~v~~~~~-G~~~-~~-d~~~l~~~i~~ll~~~~  450 (493)
                           |++.+|++.+|+|.|++-                 .-+.+ .++.+... --++ +. .++.+++++..++.| .
T Consensus       273 -----GT~tLE~aL~g~P~Vv~Yk~~~it~~iak~lvk~~yisLp-NIi~~~~ivPEliq~~~~pe~la~~l~~ll~~-~  345 (381)
T COG0763         273 -----GTATLEAALAGTPMVVAYKVKPITYFIAKRLVKLPYVSLP-NILAGREIVPELIQEDCTPENLARALEELLLN-G  345 (381)
T ss_pred             -----cHHHHHHHHhCCCEEEEEeccHHHHHHHHHhccCCcccch-HHhcCCccchHHHhhhcCHHHHHHHHHHHhcC-h
Confidence                 679999999999998862                 12223 23322110 0011 12 689999999999998 5


Q ss_pred             HHHHHHHHHHHH
Q 039338          451 MRLAQRGEACRQ  462 (493)
Q Consensus       451 ~~~~~~~~~~~~  462 (493)
                      ..++++.+...+
T Consensus       346 ~~~~~~~~~~~~  357 (381)
T COG0763         346 DRREALKEKFRE  357 (381)
T ss_pred             HhHHHHHHHHHH
Confidence            454555444433

>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG

Probab=99.22  E-value=2.9e-09  Score=99.50  Aligned_cols=255  Identities=16%  Similarity=0.106  Sum_probs=145.8

Q ss_pred             EEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCCCccccc
Q 039338           85 KIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEADKWRYS  164 (493)
Q Consensus        85 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (493)
                      ||+|.+..-+.  ...|.-.++..||++|.++|++|.+++.....  . ..+..     ...+.+ +..+.....   ..
T Consensus         1 ~i~ir~Da~~~--iG~GHv~Rcl~LA~~l~~~g~~v~f~~~~~~~--~-~~~~i-----~~~g~~-v~~~~~~~~---~~   66 (279)
T TIGR03590         1 KILFRADASSE--IGLGHVMRCLTLARALHAQGAEVAFACKPLPG--D-LIDLL-----LSAGFP-VYELPDESS---RY   66 (279)
T ss_pred             CEEEEecCCcc--ccccHHHHHHHHHHHHHHCCCEEEEEeCCCCH--H-HHHHH-----HHcCCe-EEEecCCCc---hh
Confidence            57888875442  66788888999999999999999999987544  1 00110     011221 222211111   11


Q ss_pred             cchHHHHHHhcCCCCcEEEeCccchhHH----hhhccCcEEEEeccchhhhhhhhhhhhhhcCCCCccchHhHhHHHHHH
Q 039338          165 KGWEQFDEENQREPFDVVHSESVALPHW----LARNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQGVM  240 (493)
Q Consensus       165 ~~~~~~~~~~~~~~~DiI~~~~~~~~~~----~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (493)
                      .....+.+.+++.+||+|++.++.+...    +....+ .+..+-|....                              
T Consensus        67 ~d~~~~~~~l~~~~~d~vV~D~y~~~~~~~~~~k~~~~-~l~~iDD~~~~------------------------------  115 (279)
T TIGR03590        67 DDALELINLLEEEKFDILIVDHYGLDADWEKLIKEFGR-KILVIDDLADR------------------------------  115 (279)
T ss_pred             hhHHHHHHHHHhcCCCEEEEcCCCCCHHHHHHHHHhCC-eEEEEecCCCC------------------------------
Confidence            2234567777777999999987643322    112223 34444442110                              


Q ss_pred             HHHHHHHHhhccCCeEEEcChhHHHHHHHHhC-CCCCcEEEecC---CccCCCccCCcccchhhhhhhCCCCCCcEEEEE
Q 039338          241 LKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQ-IPSERVHVILN---GINENEYGVDLSLGQSFRSRIGIPKNASLVLGV  316 (493)
Q Consensus       241 ~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~-~~~~~v~vi~n---gvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~  316 (493)
                               -..+|.++-.+.. .+... +.+ .+.........   .+..++....+        ......+.+.++++
T Consensus       116 ---------~~~~D~vin~~~~-~~~~~-y~~~~~~~~~~l~G~~Y~~lr~eF~~~~~--------~~~~~~~~~~iLi~  176 (279)
T TIGR03590       116 ---------PHDCDLLLDQNLG-ADASD-YQGLVPANCRLLLGPSYALLREEFYQLAT--------ANKRRKPLRRVLVS  176 (279)
T ss_pred             ---------CcCCCEEEeCCCC-cCHhH-hcccCcCCCeEEecchHHhhhHHHHHhhH--------hhhcccccCeEEEE
Confidence                     0146766666554 22221 112 34333333322   12221111110        00001122356778


Q ss_pred             ecccccccChHHHHHHHHHHHhhCCCeEE-EEEeCC-CcHHHHhhh---cCcEEEecCCCHHHHHHHHHHcCEEEeCCCC
Q 039338          317 AGRLVKDKGHPLLHEAFSKLMVKYPDVYL-IVAGSG-PWEQRYKDF---GHQVLVMGSMSPAELRAFYNAIDIFVNPTLR  391 (493)
Q Consensus       317 ~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l-~i~G~g-~~~~~~~~l---~~~V~~~g~~~~~~~~~~~~~adv~v~ps~~  391 (493)
                      +|..+..+....+++++..+.   .++++ +++|.+ +..+.+++.   ..+|.+.+++  +++.++|++||++|.+   
T Consensus       177 ~GG~d~~~~~~~~l~~l~~~~---~~~~i~vv~G~~~~~~~~l~~~~~~~~~i~~~~~~--~~m~~lm~~aDl~Is~---  248 (279)
T TIGR03590       177 FGGADPDNLTLKLLSALAESQ---INISITLVTGSSNPNLDELKKFAKEYPNIILFIDV--ENMAELMNEADLAIGA---  248 (279)
T ss_pred             eCCcCCcCHHHHHHHHHhccc---cCceEEEEECCCCcCHHHHHHHHHhCCCEEEEeCH--HHHHHHHHHCCEEEEC---
Confidence            888887666677788877653   23443 366764 444444443   2689999998  6999999999999963   


Q ss_pred             CCCCChHHHHHHHcCCcEEecCC
Q 039338          392 PQGLDLTLMEAMMSGKPVMASRF  414 (493)
Q Consensus       392 ~eg~~~~~~EAm~~G~PvI~s~~  414 (493)
                         .|.|+.|++++|+|+|+...
T Consensus       249 ---~G~T~~E~~a~g~P~i~i~~  268 (279)
T TIGR03590       249 ---AGSTSWERCCLGLPSLAICL  268 (279)
T ss_pred             ---CchHHHHHHHcCCCEEEEEe
Confidence               24799999999999998754

This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.

>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=99.20  E-value=7.7e-10  Score=105.79  Aligned_cols=308  Identities=14%  Similarity=0.160  Sum_probs=176.4

Q ss_pred             CCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCCCccccccchHHHHHHhcCC
Q 039338           98 TPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEADKWRYSKGWEQFDEENQRE  177 (493)
Q Consensus        98 ~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (493)
                      +.+| ..+...|+++|.+++-++.++...+..+.....+...+..    ....+-+....+......+....+.+.+.+.
T Consensus         7 E~SG-D~~ga~Li~~Lk~~~p~~~~~GvGG~~M~~~G~~~l~d~~----~lsvmG~~Evl~~l~~~~~~~~~~~~~~~~~   81 (373)
T PF02684_consen    7 EASG-DLHGARLIRALKARDPDIEFYGVGGPRMQAAGVESLFDME----ELSVMGFVEVLKKLPKLKRLFRKLVERIKEE   81 (373)
T ss_pred             CccH-HHHHHHHHHHHHhhCCCcEEEEEechHHHhCCCceecchH----HhhhccHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence            4455 6678999999999988888888777663332222211000    0000000000011112333445555556688


Q ss_pred             CCcEEEeCcc-chhHHhhh----ccCcEEEEeccchhhhhhhhhhhhhhcCCCCccchHhHhHHHHHHHHHHHHHHhhcc
Q 039338          178 PFDVVHSESV-ALPHWLAR----NVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQGVMLKVLNEIRFFNK  252 (493)
Q Consensus       178 ~~DiI~~~~~-~~~~~~~~----~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (493)
                      +||+++.-++ .+...+++    .-++. -.+|-+.+..     |.             |+..-.+         .+-+.
T Consensus        82 ~pd~vIlID~pgFNlrlak~lk~~~~~~-~viyYI~Pqv-----WA-------------Wr~~R~~---------~i~~~  133 (373)
T PF02684_consen   82 KPDVVILIDYPGFNLRLAKKLKKRGIPI-KVIYYISPQV-----WA-------------WRPGRAK---------KIKKY  133 (373)
T ss_pred             CCCEEEEeCCCCccHHHHHHHHHhCCCc-eEEEEECCce-----ee-------------eCccHHH---------HHHHH
Confidence            9999887543 33333332    22211 1122111111     10             0011111         22345


Q ss_pred             CCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCCCCCCcEEEEEecccc-c-ccChHHHH
Q 039338          253 YAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVAGRLV-K-DKGHPLLH  330 (493)
Q Consensus       253 ~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Gr~~-~-~Kg~~~ll  330 (493)
                      +|+++++=++..+++.+ +|+   ++..+.|+.-.....  .......++.+ ++.+++++.+..|+=. + .+....++
T Consensus       134 ~D~ll~ifPFE~~~y~~-~g~---~~~~VGHPl~d~~~~--~~~~~~~~~~~-l~~~~~iIaLLPGSR~~EI~rllP~~l  206 (373)
T PF02684_consen  134 VDHLLVIFPFEPEFYKK-HGV---PVTYVGHPLLDEVKP--EPDRAEAREKL-LDPDKPIIALLPGSRKSEIKRLLPIFL  206 (373)
T ss_pred             HhheeECCcccHHHHhc-cCC---CeEEECCcchhhhcc--CCCHHHHHHhc-CCCCCcEEEEeCCCCHHHHHHHHHHHH
Confidence            68899999999999988 464   577888775432211  12234556666 8888877777777532 2 45668889


Q ss_pred             HHHHHHHhhCCCeEEEEEeCCCcHHH-Hhh----hcCcEEEecCCCHHHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHc
Q 039338          331 EAFSKLMVKYPDVYLIVAGSGPWEQR-YKD----FGHQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMS  405 (493)
Q Consensus       331 ~a~~~l~~~~~~~~l~i~G~g~~~~~-~~~----l~~~V~~~g~~~~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~  405 (493)
                      ++++++.+++|++++++......... +.+    ...++...-.  ..+-.+.|++||+.+..|      |++.+|++.+
T Consensus       207 ~aa~~l~~~~p~l~fvvp~a~~~~~~~i~~~~~~~~~~~~~~~~--~~~~~~~m~~ad~al~~S------GTaTLE~Al~  278 (373)
T PF02684_consen  207 EAAKLLKKQRPDLQFVVPVAPEVHEELIEEILAEYPPDVSIVII--EGESYDAMAAADAALAAS------GTATLEAALL  278 (373)
T ss_pred             HHHHHHHHhCCCeEEEEecCCHHHHHHHHHHHHhhCCCCeEEEc--CCchHHHHHhCcchhhcC------CHHHHHHHHh
Confidence            99999999999999998775443322 222    1232322211  246778999999999755      6799999999


Q ss_pred             CCcEEecC-----------------CCCCccceeeeCc-ce-EEECC-CHHHHHHHHHHHHHcCcHHHHH
Q 039338          406 GKPVMASR-----------------FPSIKGTIVVDDE-FG-FMFAP-NVESLHKTLEAAVSEGPMRLAQ  455 (493)
Q Consensus       406 G~PvI~s~-----------------~~~~~~e~v~~~~-~G-~~~~~-d~~~l~~~i~~ll~~~~~~~~~  455 (493)
                      |+|.|+.-                 .-+++ .++.+.+ .- ++-+. +++.+++++..++.| .+.++.
T Consensus       279 g~P~Vv~Yk~~~lt~~iak~lvk~~~isL~-Niia~~~v~PEliQ~~~~~~~i~~~~~~ll~~-~~~~~~  346 (373)
T PF02684_consen  279 GVPMVVAYKVSPLTYFIAKRLVKVKYISLP-NIIAGREVVPELIQEDATPENIAAELLELLEN-PEKRKK  346 (373)
T ss_pred             CCCEEEEEcCcHHHHHHHHHhhcCCEeech-hhhcCCCcchhhhcccCCHHHHHHHHHHHhcC-HHHHHH
Confidence            99998762                 11222 2222211 11 11123 899999999999998 555433

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process

>TIGR01426 MGT glycosyltransferase, MGT family

Probab=99.20  E-value=7.7e-09  Score=102.37  Aligned_cols=161  Identities=17%  Similarity=0.213  Sum_probs=103.4

Q ss_pred             CCCcEEEEEecccccccChHHHHHHHHHHHhhCCCeE-EEEEeCCCcHHHHhhhcCcEEEecCCCHHHHHHHHHHcCEEE
Q 039338          308 KNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVY-LIVAGSGPWEQRYKDFGHQVLVMGSMSPAELRAFYNAIDIFV  386 (493)
Q Consensus       308 ~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~-l~i~G~g~~~~~~~~l~~~V~~~g~~~~~~~~~~~~~adv~v  386 (493)
                      .+++.+++..|+..... ...+-+++..+.+.  +++ ++.+|.+.....+.++.++|.+.+++++.   +++..||++|
T Consensus       223 ~~~~~v~vs~Gs~~~~~-~~~~~~~~~al~~~--~~~~i~~~g~~~~~~~~~~~~~~v~~~~~~p~~---~ll~~~~~~I  296 (392)
T TIGR01426       223 DGRPVVLISLGTVFNNQ-PSFYRTCVEAFRDL--DWHVVLSVGRGVDPADLGELPPNVEVRQWVPQL---EILKKADAFI  296 (392)
T ss_pred             CCCCEEEEecCccCCCC-HHHHHHHHHHHhcC--CCeEEEEECCCCChhHhccCCCCeEEeCCCCHH---HHHhhCCEEE
Confidence            34557778888864322 12222233333222  334 44556655555555667899999999864   6789999999


Q ss_pred             eCCCCCCCCChHHHHHHHcCCcEEecCCCCCcc---ceeeeCcceEEECC---CHHHHHHHHHHHHHcCcHHHHHHHHHH
Q 039338          387 NPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKG---TIVVDDEFGFMFAP---NVESLHKTLEAAVSEGPMRLAQRGEAC  460 (493)
Q Consensus       387 ~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~---e~v~~~~~G~~~~~---d~~~l~~~i~~ll~~~~~~~~~~~~~~  460 (493)
                      ..+    |. .+++||+++|+|+|+....+-..   +.+.+.+.|..+..   +++++.++|.+++++ ++.++++ +..
T Consensus       297 ~hg----G~-~t~~Eal~~G~P~v~~p~~~dq~~~a~~l~~~g~g~~l~~~~~~~~~l~~ai~~~l~~-~~~~~~~-~~l  369 (392)
T TIGR01426       297 THG----GM-NSTMEALFNGVPMVAVPQGADQPMTARRIAELGLGRHLPPEEVTAEKLREAVLAVLSD-PRYAERL-RKM  369 (392)
T ss_pred             ECC----Cc-hHHHHHHHhCCCEEecCCcccHHHHHHHHHHCCCEEEeccccCCHHHHHHHHHHHhcC-HHHHHHH-HHH
Confidence            633    32 48999999999999986543221   23445567777763   689999999999988 6644444 334


Q ss_pred             HHHHHHhcCHHHHHHHHHHHH
Q 039338          461 RQYAASMFTANKMALAYERLF  481 (493)
Q Consensus       461 ~~~~~~~fs~~~~~~~~~~~~  481 (493)
                      ++.+...-..+..++.+++++
T Consensus       370 ~~~~~~~~~~~~aa~~i~~~~  390 (392)
T TIGR01426       370 RAEIREAGGARRAADEIEGFL  390 (392)
T ss_pred             HHHHHHcCCHHHHHHHHHHhh
Confidence            444444456777777776654

This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.

>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]

Probab=99.19  E-value=2.4e-10  Score=110.58  Aligned_cols=183  Identities=18%  Similarity=0.255  Sum_probs=139.7

Q ss_pred             hhhhhhCCCCCCcEEEEEecccccccChHHHHHHHHHHHhhCCCeEEEEEe-----CCCcHHHHhhhc---CcEEEecCC
Q 039338          299 SFRSRIGIPKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAG-----SGPWEQRYKDFG---HQVLVMGSM  370 (493)
Q Consensus       299 ~~r~~~~i~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G-----~g~~~~~~~~l~---~~V~~~g~~  370 (493)
                      ..|..+++|++. ++++.+..+  .|--...++.|.++.++.|+-.|++.-     +...+.+.++++   ++|+|.+-.
T Consensus       748 P~r~~y~Lp~d~-vvf~~FNqL--yKidP~~l~~W~~ILk~VPnS~LwllrfPa~ge~rf~ty~~~~Gl~p~riifs~va  824 (966)
T KOG4626|consen  748 PTRSQYGLPEDA-VVFCNFNQL--YKIDPSTLQMWANILKRVPNSVLWLLRFPAVGEQRFRTYAEQLGLEPDRIIFSPVA  824 (966)
T ss_pred             CCCCCCCCCCCe-EEEeechhh--hcCCHHHHHHHHHHHHhCCcceeEEEeccccchHHHHHHHHHhCCCccceeecccc
Confidence            467889999886 666666555  476778899999999999998888754     333445566665   899999988


Q ss_pred             CHHHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCcc----ceeeeCcceEEECCCHHHHHHHHHHHH
Q 039338          371 SPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKG----TIVVDDEFGFMFAPNVESLHKTLEAAV  446 (493)
Q Consensus       371 ~~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~----e~v~~~~~G~~~~~d~~~l~~~i~~ll  446 (493)
                      ..+|-..-++-+||.+.+...  +--++-+|.+++|+|+|+-.......    ..+..-+.|-++..+.++..+.-.++-
T Consensus       825 ~k~eHvrr~~LaDv~LDTplc--nGhTTg~dvLw~GvPmVTmpge~lAsrVa~Sll~~~Gl~hliak~~eEY~~iaV~La  902 (966)
T KOG4626|consen  825 AKEEHVRRGQLADVCLDTPLC--NGHTTGMDVLWAGVPMVTMPGETLASRVAASLLTALGLGHLIAKNREEYVQIAVRLA  902 (966)
T ss_pred             chHHHHHhhhhhhhcccCcCc--CCcccchhhhccCCceeecccHHHHHHHHHHHHHHcccHHHHhhhHHHHHHHHHHhh
Confidence            888888999999999986643  33468899999999999875322221    122233455566668899999999999


Q ss_pred             HcCcHHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHhhc
Q 039338          447 SEGPMRLAQRGEACRQYAASM--FTANKMALAYERLFLCIKNE  487 (493)
Q Consensus       447 ~~~~~~~~~~~~~~~~~~~~~--fs~~~~~~~~~~~~~~i~~~  487 (493)
                      .| .+.++.+..+.++.....  |+-.+.+..++++|.+|.++
T Consensus       903 td-~~~L~~lr~~l~~~r~~splfd~~q~~~~LE~~y~~MW~~  944 (966)
T KOG4626|consen  903 TD-KEYLKKLRAKLRKARASSPLFDTKQYAKGLERLYLQMWKK  944 (966)
T ss_pred             cC-HHHHHHHHHHHHHHhcCCCccCchHHHHHHHHHHHHHHHH
Confidence            88 888888888887765543  89999999999999998754

>TIGR00661 MJ1255 conserved hypothetical protein

Probab=99.19  E-value=1e-08  Score=98.31  Aligned_cols=122  Identities=13%  Similarity=0.147  Sum_probs=80.3

Q ss_pred             CCcEEEEEecccccccChHHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhhhcCcEEEecCCCHHHHHHHHHHcCEEEeC
Q 039338          309 NASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDFGHQVLVMGSMSPAELRAFYNAIDIFVNP  388 (493)
Q Consensus       309 ~~~~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~l~~~V~~~g~~~~~~~~~~~~~adv~v~p  388 (493)
                      +++.++++.|.    .+...+++++.++    +++.+++ |.....  ...+.+++.+.++.+ +++.++|..||++|.-
T Consensus       187 ~~~~iLv~~g~----~~~~~l~~~l~~~----~~~~~i~-~~~~~~--~~~~~~~v~~~~~~~-~~~~~~l~~ad~vI~~  254 (321)
T TIGR00661       187 GEDYILVYIGF----EYRYKILELLGKI----ANVKFVC-YSYEVA--KNSYNENVEIRRITT-DNFKELIKNAELVITH  254 (321)
T ss_pred             CCCcEEEECCc----CCHHHHHHHHHhC----CCeEEEE-eCCCCC--ccccCCCEEEEECCh-HHHHHHHHhCCEEEEC
Confidence            33456667654    2445666776555    4555544 432211  124458999999876 7899999999999963


Q ss_pred             CCCCCCCChHHHHHHHcCCcEEecCCCCCccc-----eeeeCcceEEECC-CHHHHHHHHHHHHHc
Q 039338          389 TLRPQGLDLTLMEAMMSGKPVMASRFPSIKGT-----IVVDDEFGFMFAP-NVESLHKTLEAAVSE  448 (493)
Q Consensus       389 s~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e-----~v~~~~~G~~~~~-d~~~l~~~i~~ll~~  448 (493)
                      +    |+ .++.||+++|+|+|.....+..++     .+++.+.|..++. +. ++.+++.+.+.+
T Consensus       255 ~----G~-~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~~g~~~~l~~~~~-~~~~~~~~~~~~  314 (321)
T TIGR00661       255 G----GF-SLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDLGCGIALEYKEL-RLLEAILDIRNM  314 (321)
T ss_pred             C----Ch-HHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHHCCCEEEcChhhH-HHHHHHHhcccc
Confidence            3    32 479999999999999987654321     3556677888776 55 555555555544

This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.

>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length

Probab=99.17  E-value=2.6e-09  Score=100.83  Aligned_cols=296  Identities=12%  Similarity=0.111  Sum_probs=167.8

Q ss_pred             eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCCCcc--
Q 039338           84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEADKW--  161 (493)
Q Consensus        84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  161 (493)
                      |||++-..+ |      ..-.+..++++.|.++||+|.+.+.....  .  .+..+     ..+.+...+-.......  
T Consensus         1 MkIwiDi~~-p------~hvhfFk~~I~eL~~~GheV~it~R~~~~--~--~~LL~-----~yg~~y~~iG~~g~~~~~K   64 (335)
T PF04007_consen    1 MKIWIDITH-P------AHVHFFKNIIRELEKRGHEVLITARDKDE--T--EELLD-----LYGIDYIVIGKHGDSLYGK   64 (335)
T ss_pred             CeEEEECCC-c------hHHHHHHHHHHHHHhCCCEEEEEEeccch--H--HHHHH-----HcCCCeEEEcCCCCCHHHH
Confidence            788887753 2      24667889999999999999999887654  1  11110     01222222211111111  


Q ss_pred             --ccccchHHHHHHhcCCCCcEEEeCccchh--HHhhhccCcEEEEeccchhhhhhhhhhhhhhcCCCCccchHhHhHHH
Q 039338          162 --RYSKGWEQFDEENQREPFDVVHSESVALP--HWLARNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQ  237 (493)
Q Consensus       162 --~~~~~~~~~~~~~~~~~~DiI~~~~~~~~--~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (493)
                        .......++.+.+++.+||++++.+..-.  .....++| .+........     ...                    
T Consensus        65 l~~~~~R~~~l~~~~~~~~pDv~is~~s~~a~~va~~lgiP-~I~f~D~e~a-----~~~--------------------  118 (335)
T PF04007_consen   65 LLESIERQYKLLKLIKKFKPDVAISFGSPEAARVAFGLGIP-SIVFNDTEHA-----IAQ--------------------  118 (335)
T ss_pred             HHHHHHHHHHHHHHHHhhCCCEEEecCcHHHHHHHHHhCCC-eEEEecCchh-----hcc--------------------
Confidence              11222345555667889999998765322  34445667 5544433110     000                    


Q ss_pred             HHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEe-cCCccCCCccCCcccchhhhhhhCCCCCCcEEEEE
Q 039338          238 GVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVI-LNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGV  316 (493)
Q Consensus       238 ~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi-~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~  316 (493)
                              .+-.++-+|.++++.-.-.+.+.+ +|.. .  .+. ++|+++..+-..-.....+.+++|++++ +++++=
T Consensus       119 --------~~Lt~Pla~~i~~P~~~~~~~~~~-~G~~-~--~i~~y~G~~E~ayl~~F~Pd~~vl~~lg~~~~-~yIvvR  185 (335)
T PF04007_consen  119 --------NRLTLPLADVIITPEAIPKEFLKR-FGAK-N--QIRTYNGYKELAYLHPFKPDPEVLKELGLDDE-PYIVVR  185 (335)
T ss_pred             --------ceeehhcCCeeECCcccCHHHHHh-cCCc-C--CEEEECCeeeEEeecCCCCChhHHHHcCCCCC-CEEEEE
Confidence                    002245678888776655555555 6643 2  344 7888875544334444678899997754 455532


Q ss_pred             eccccc--ccCh-HHHHHHHHHHHhhCCCeEEEEEeCCCcH-HHHhhhcCcEEEecCCCHHHHHHHHHHcCEEEeCCCCC
Q 039338          317 AGRLVK--DKGH-PLLHEAFSKLMVKYPDVYLIVAGSGPWE-QRYKDFGHQVLVMGSMSPAELRAFYNAIDIFVNPTLRP  392 (493)
Q Consensus       317 ~Gr~~~--~Kg~-~~ll~a~~~l~~~~~~~~l~i~G~g~~~-~~~~~l~~~V~~~g~~~~~~~~~~~~~adv~v~ps~~~  392 (493)
                      ...+..  .+|- ..+-+.+..+.+.+ +. ++++.+.... +..++..  +.+....  -+..+++.-||++|-     
T Consensus       186 ~~~~~A~y~~~~~~i~~~ii~~L~~~~-~~-vV~ipr~~~~~~~~~~~~--~~i~~~~--vd~~~Ll~~a~l~Ig-----  254 (335)
T PF04007_consen  186 PEAWKASYDNGKKSILPEIIEELEKYG-RN-VVIIPRYEDQRELFEKYG--VIIPPEP--VDGLDLLYYADLVIG-----  254 (335)
T ss_pred             eccccCeeecCccchHHHHHHHHHhhC-ce-EEEecCCcchhhHHhccC--ccccCCC--CCHHHHHHhcCEEEe-----
Confidence            222111  2222 33456677776654 33 5556544333 3333322  4333321  256689999999992     


Q ss_pred             CCCChHHHHHHHcCCcEEecCCCCC--ccceeeeCcceEEECC-CHHHHHHHHHHHHHc
Q 039338          393 QGLDLTLMEAMMSGKPVMASRFPSI--KGTIVVDDEFGFMFAP-NVESLHKTLEAAVSE  448 (493)
Q Consensus       393 eg~~~~~~EAm~~G~PvI~s~~~~~--~~e~v~~~~~G~~~~~-d~~~l~~~i~~ll~~  448 (493)
                      +| |+...||..+|+|.|++..|..  .++.+.  +.|+++.. |++++.+.+.+....
T Consensus       255 ~g-gTMa~EAA~LGtPaIs~~~g~~~~vd~~L~--~~Gll~~~~~~~ei~~~v~~~~~~  310 (335)
T PF04007_consen  255 GG-GTMAREAALLGTPAISCFPGKLLAVDKYLI--EKGLLYHSTDPDEIVEYVRKNLGK  310 (335)
T ss_pred             CC-cHHHHHHHHhCCCEEEecCCcchhHHHHHH--HCCCeEecCCHHHHHHHHHHhhhc
Confidence            33 6899999999999999754322  112332  34777777 999988866665443

They are found in archaea and some bacteria and have no known function.

>COG4641 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=99.17  E-value=6e-09  Score=96.55  Aligned_cols=333  Identities=11%  Similarity=0.047  Sum_probs=203.5

Q ss_pred             CCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCCCccccccchHHHHHHhcCC
Q 039338           98 TPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEADKWRYSKGWEQFDEENQRE  177 (493)
Q Consensus        98 ~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (493)
                      ..+|...+...+.++|...||+|..+-+....  ........     ....-...+...        ..-......++..
T Consensus        12 y~~~~~~~~~~~~~~l~~~g~kvlflE~~~~~--~~k~rd~~-----~~~~~~~~~~~~--------~~e~~~~~~i~~f   76 (373)
T COG4641          12 YNNGSAEYYRGLLRALKMDGMKVLFLESGDFW--DYKNRDID-----AEDGCTEAFYKD--------QPELESLLYIREF   76 (373)
T ss_pred             hcCCchhhHHHHHHHHHhccceEEEEecccHH--hhhccccc-----CccchhheeecC--------cHHHHHHHHHHhc
Confidence            45667778889999999999999999877655  11111100     000000001000        0112334455688


Q ss_pred             CCcEEEeCcc----------chhHHhh-hccCcEEEEeccchhhhhhhhhhhhhhcCCCCccchHhHhHHHHHHHHHHHH
Q 039338          178 PFDVVHSESV----------ALPHWLA-RNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQGVMLKVLNE  246 (493)
Q Consensus       178 ~~DiI~~~~~----------~~~~~~~-~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (493)
                      ++|+|.....          .+.+|+. ..+| ++...-+.++........                  ....+.     
T Consensus        77 k~d~iv~~~~~~~~~~~~~~~~~a~l~~~~l~-~~~w~te~p~~~~~~~~~------------------~~~~~~-----  132 (373)
T COG4641          77 KPDIIVNMSGDDQPDEESTIDLWAWLKRKCLP-VIVWYTEDPYDTDIFSQV------------------AEEQLA-----  132 (373)
T ss_pred             CCcEEEEecccccccceehHHHHHHhhcCCcc-eEEEEeccchhhhhhhhh------------------hHHHhh-----
Confidence            9999987532          2333333 3445 566665544433222111                  111111     


Q ss_pred             HHhhccCCeEEEcChhH-HHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCCCCCCcEEEEEecccccccC
Q 039338          247 IRFFNKYAHHVAISDSC-GEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVAGRLVKDKG  325 (493)
Q Consensus       247 ~~~~~~~d~ii~~S~~~-~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Gr~~~~Kg  325 (493)
                      ++-+...|.|++.++.. ++.+.+..+  ..+++.++.++|.+.+.+-+.+.           ....-+.++|+..+. -
T Consensus       133 ~~~l~~fd~v~~~g~~l~~~~yyq~~~--~~~~~~~~~a~d~~~~~~i~~da-----------~~~~dL~~ign~~pD-r  198 (373)
T COG4641         133 RRPLFIFDNVLSFGGGLVANKYYQEGG--ARNCYYLPWAVDDSLFHPIPPDA-----------SYDVDLNLIGNPYPD-R  198 (373)
T ss_pred             ccccchhhhhhhccchHHHHHHHHhhc--ccceeccCccCCchhcccCCccc-----------cceeeeEEecCCCcc-H
Confidence            11223344566666666 555554332  46889999999999887765321           111357788887654 1


Q ss_pred             hHHHHHHHHHHHhhC-CCeEEEEEeCCCcHHHHhh-hcCcEEEecCCCH-HHHHHHHHHcCEEEeCCC--CCCC---CCh
Q 039338          326 HPLLHEAFSKLMVKY-PDVYLIVAGSGPWEQRYKD-FGHQVLVMGSMSP-AELRAFYNAIDIFVNPTL--RPQG---LDL  397 (493)
Q Consensus       326 ~~~ll~a~~~l~~~~-~~~~l~i~G~g~~~~~~~~-l~~~V~~~g~~~~-~~~~~~~~~adv~v~ps~--~~eg---~~~  397 (493)
                      .+.+-+.+..-..+. .+-++.+.|..-....... ..+++...|+++. ..+...++..|+.++-+.  ..++   +.+
T Consensus       199 ~e~~ke~~~~ps~kl~v~rr~~~~g~~y~~~~~~~~~~~~~~yIg~~~~~~~v~~~~~~~~~~~n~~r~~~~~~l~~~~~  278 (373)
T COG4641         199 VEEIKEFFVEPSFKLMVDRRFYVLGPRYPDDIWGRTWEPNVQYIGYYNPKDGVPNAFKRDDVTLNINRASIANALFSPTN  278 (373)
T ss_pred             HHHHHHHhhccchhhhccceeeecCCccchhhhcccccchhhhhhccCccchhhhcccccceeeeecHHHHHhhcCCchh
Confidence            222222222111111 1345666665411222221 2368888898866 889999999999887432  1122   378


Q ss_pred             HHHHHHHcCCcEEecCCCCCccceeeeCcceEEECCCHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHhcCHHHHHHHH
Q 039338          398 TLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAPNVESLHKTLEAAVSEGPMRLAQRGEACRQYAASMFTANKMALAY  477 (493)
Q Consensus       398 ~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~  477 (493)
                      -++|+++||.|.|+....++. ....+|+.-++.. |.+++.+.+..++.. ++.++++++.+++.+...|+.++-+.++
T Consensus       279 RvFeiagc~~~liT~~~~~~e-~~f~pgk~~iv~~-d~kdl~~~~~yll~h-~~erkeiae~~ye~V~~~ht~~~r~~~~  355 (373)
T COG4641         279 RVFEIAGCGGFLITDYWKDLE-KFFKPGKDIIVYQ-DSKDLKEKLKYLLNH-PDERKEIAECAYERVLARHTYEERIFKL  355 (373)
T ss_pred             hHHHHhhcCCccccccHHHHH-HhcCCchheEEec-CHHHHHHHHHHHhcC-cchHHHHHHhhHHHHHHhccHHHHHHHH
Confidence            899999999999998877775 5566665544444 999999999999999 8999999999999999999999998888


Q ss_pred             HHHHHHHhh
Q 039338          478 ERLFLCIKN  486 (493)
Q Consensus       478 ~~~~~~i~~  486 (493)
                      .+....+..
T Consensus       356 ~~~i~sI~~  364 (373)
T COG4641         356 LNEIASINI  364 (373)
T ss_pred             HHHHHHHHH
Confidence            877776443

>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5

Probab=99.14  E-value=1.2e-10  Score=111.88  Aligned_cols=274  Identities=15%  Similarity=0.105  Sum_probs=147.8

Q ss_pred             cchHHHHHHhcCCCCcEEEeCccc---hh---HHhhhccCcEEEEeccc-hhhhhhhhhhhhhhcCCCCccchHhHhHHH
Q 039338          165 KGWEQFDEENQREPFDVVHSESVA---LP---HWLARNVTNLAVSWHGI-ALESLQSGIFQDLTRKPLEPMSLAFNKSLQ  237 (493)
Q Consensus       165 ~~~~~~~~~~~~~~~DiI~~~~~~---~~---~~~~~~~p~~v~~~h~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (493)
                      .....+...+.+.+||+|++++-.   +.   ++...++|  +..+++- ........                   ...
T Consensus        54 ~~~~~~~~~~~~~~Pd~Vlv~GD~~~~la~alaA~~~~ip--v~HieaGlRs~d~~~g-------------------~~d  112 (346)
T PF02350_consen   54 LAIIELADVLEREKPDAVLVLGDRNEALAAALAAFYLNIP--VAHIEAGLRSGDRTEG-------------------MPD  112 (346)
T ss_dssp             HHHHHHHHHHHHHT-SEEEEETTSHHHHHHHHHHHHTT-E--EEEES-----S-TTSS-------------------TTH
T ss_pred             HHHHHHHHHHHhcCCCEEEEEcCCchHHHHHHHHHHhCCC--EEEecCCCCccccCCC-------------------Cch
Confidence            345566667778899999998642   22   22334556  4444442 11100000                   111


Q ss_pred             HHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhh-hhhhCCCCCCcEEEEE
Q 039338          238 GVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSF-RSRIGIPKNASLVLGV  316 (493)
Q Consensus       238 ~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~-r~~~~i~~~~~~~i~~  316 (493)
                      ...+..     .-+-++..++.++..++.+.+ .|+++++++++.|..-.............. ...+.-...++++++.
T Consensus       113 e~~R~~-----i~~la~lhf~~t~~~~~~L~~-~G~~~~rI~~vG~~~~D~l~~~~~~~~~~~~~~~i~~~~~~~~iLvt  186 (346)
T PF02350_consen  113 EINRHA-----IDKLAHLHFAPTEEARERLLQ-EGEPPERIFVVGNPGIDALLQNKEEIEEKYKNSGILQDAPKPYILVT  186 (346)
T ss_dssp             HHHHHH-----HHHH-SEEEESSHHHHHHHHH-TT--GGGEEE---HHHHHHHHHHHTTCC-HHHHHHHHCTTSEEEEEE
T ss_pred             hhhhhh-----hhhhhhhhccCCHHHHHHHHh-cCCCCCeEEEEChHHHHHHHHhHHHHhhhhhhHHHHhccCCCEEEEE
Confidence            111111     123478899999999999998 599999999998853222211111111111 1111002344466666


Q ss_pred             eccccc---ccChHHHHHHHHHHHhhCCCeEEEEEeCC--CcH----HHHhhhcCcEEEecCCCHHHHHHHHHHcCEEEe
Q 039338          317 AGRLVK---DKGHPLLHEAFSKLMVKYPDVYLIVAGSG--PWE----QRYKDFGHQVLVMGSMSPAELRAFYNAIDIFVN  387 (493)
Q Consensus       317 ~Gr~~~---~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g--~~~----~~~~~l~~~V~~~g~~~~~~~~~~~~~adv~v~  387 (493)
                      .=+...   ......+.+++..+.+. +++.+++....  ...    +.++++ +++.+...++..++..+++.|+++|-
T Consensus       187 ~H~~t~~~~~~~~~~i~~~l~~L~~~-~~~~vi~~~hn~p~~~~~i~~~l~~~-~~v~~~~~l~~~~~l~ll~~a~~vvg  264 (346)
T PF02350_consen  187 LHPVTNEDNPERLEQILEALKALAER-QNVPVIFPLHNNPRGSDIIIEKLKKY-DNVRLIEPLGYEEYLSLLKNADLVVG  264 (346)
T ss_dssp             -S-CCCCTHH--HHHHHHHHHHHHHH-TTEEEEEE--S-HHHHHHHHHHHTT--TTEEEE----HHHHHHHHHHESEEEE
T ss_pred             eCcchhcCChHHHHHHHHHHHHHHhc-CCCcEEEEecCCchHHHHHHHHhccc-CCEEEECCCCHHHHHHHHhcceEEEE
Confidence            544432   34567888888888887 78888887752  222    234444 69999999999999999999999995


Q ss_pred             CCCCCCCCChHHH-HHHHcCCcEEecCCCCCccceeeeCcceEEECCCHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHH
Q 039338          388 PTLRPQGLDLTLM-EAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAPNVESLHKTLEAAVSEGPMRLAQRGEACRQYAAS  466 (493)
Q Consensus       388 ps~~~eg~~~~~~-EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~  466 (493)
                      -|      | .+. ||..+|+|+|.-+..+-..+.+..+.+-+ +..|.+++.+++.+++++ .+.+.++..     ...
T Consensus       265 dS------s-GI~eEa~~lg~P~v~iR~~geRqe~r~~~~nvl-v~~~~~~I~~ai~~~l~~-~~~~~~~~~-----~~n  330 (346)
T PF02350_consen  265 DS------S-GIQEEAPSLGKPVVNIRDSGERQEGRERGSNVL-VGTDPEAIIQAIEKALSD-KDFYRKLKN-----RPN  330 (346)
T ss_dssp             SS------H-HHHHHGGGGT--EEECSSS-S-HHHHHTTSEEE-ETSSHHHHHHHHHHHHH--HHHHHHHHC-----S--
T ss_pred             cC------c-cHHHHHHHhCCeEEEecCCCCCHHHHhhcceEE-eCCCHHHHHHHHHHHHhC-hHHHHhhcc-----CCC
Confidence            33      3 555 99999999999966665546666665544 777999999999999987 444443321     122


Q ss_pred             hcCHHHHHHHHHHHH
Q 039338          467 MFTANKMALAYERLF  481 (493)
Q Consensus       467 ~fs~~~~~~~~~~~~  481 (493)
                      -|.-.+.++++.+++
T Consensus       331 pYgdG~as~rI~~~L  345 (346)
T PF02350_consen  331 PYGDGNASERIVEIL  345 (346)
T ss_dssp             TT-SS-HHHHHHHHH
T ss_pred             CCCCCcHHHHHHHhh
Confidence            344445555555554

1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.

>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]

Probab=99.10  E-value=3.1e-09  Score=104.21  Aligned_cols=162  Identities=17%  Similarity=0.155  Sum_probs=110.0

Q ss_pred             CCCCCcEEEEEecccccccChHHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhhhcCcEEEecCCCHHHHHHHHHHcCEE
Q 039338          306 IPKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDFGHQVLVMGSMSPAELRAFYNAIDIF  385 (493)
Q Consensus       306 i~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~l~~~V~~~g~~~~~~~~~~~~~adv~  385 (493)
                      ++.+++++.+..|.....   ..+++.+...... -+.++++...+ .+.....+.+|+...+++|+.+   ++..||++
T Consensus       233 ~~~d~~~vyvslGt~~~~---~~l~~~~~~a~~~-l~~~vi~~~~~-~~~~~~~~p~n~~v~~~~p~~~---~l~~ad~v  304 (406)
T COG1819         233 IPADRPIVYVSLGTVGNA---VELLAIVLEALAD-LDVRVIVSLGG-ARDTLVNVPDNVIVADYVPQLE---LLPRADAV  304 (406)
T ss_pred             hcCCCCeEEEEcCCcccH---HHHHHHHHHHHhc-CCcEEEEeccc-cccccccCCCceEEecCCCHHH---HhhhcCEE
Confidence            456666777788887644   3333333322222 26777777654 3335666779999999997664   89999999


Q ss_pred             EeCCCCCCCCChHHHHHHHcCCcEEecCCCCCc---cceeeeCcceEEEC--C-CHHHHHHHHHHHHHcCcHHHHHHHHH
Q 039338          386 VNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIK---GTIVVDDEFGFMFA--P-NVESLHKTLEAAVSEGPMRLAQRGEA  459 (493)
Q Consensus       386 v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~---~e~v~~~~~G~~~~--~-d~~~l~~~i~~ll~~~~~~~~~~~~~  459 (493)
                      |...    |. .++.||+.+|+|+|+-..+.-.   .+.+++-+.|...+  . +++.+.++|.+++.+ +. +++-.++
T Consensus       305 I~hG----G~-gtt~eaL~~gvP~vv~P~~~DQ~~nA~rve~~G~G~~l~~~~l~~~~l~~av~~vL~~-~~-~~~~~~~  377 (406)
T COG1819         305 IHHG----GA-GTTSEALYAGVPLVVIPDGADQPLNAERVEELGAGIALPFEELTEERLRAAVNEVLAD-DS-YRRAAER  377 (406)
T ss_pred             EecC----Cc-chHHHHHHcCCCEEEecCCcchhHHHHHHHHcCCceecCcccCCHHHHHHHHHHHhcC-HH-HHHHHHH
Confidence            9743    33 4999999999999998755311   13466678898887  4 899999999999997 44 4444455


Q ss_pred             HHHHHHHhcCHHHHHHHHHHHHH
Q 039338          460 CRQYAASMFTANKMALAYERLFL  482 (493)
Q Consensus       460 ~~~~~~~~fs~~~~~~~~~~~~~  482 (493)
                      ..+.+.+.-..++.++.++++..
T Consensus       378 ~~~~~~~~~g~~~~a~~le~~~~  400 (406)
T COG1819         378 LAEEFKEEDGPAKAADLLEEFAR  400 (406)
T ss_pred             HHHHhhhcccHHHHHHHHHHHHh
Confidence            55555554555556666665554

>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional

Probab=99.04  E-value=2.4e-07  Score=93.73  Aligned_cols=133  Identities=16%  Similarity=0.154  Sum_probs=88.4

Q ss_pred             cEEEEEeccccc-----ccChHHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhhhcCcEEEecCCCHHHHHHHHHHcCEE
Q 039338          311 SLVLGVAGRLVK-----DKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDFGHQVLVMGSMSPAELRAFYNAIDIF  385 (493)
Q Consensus       311 ~~~i~~~Gr~~~-----~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~l~~~V~~~g~~~~~~~~~~~~~adv~  385 (493)
                      +.+++..|....     .+-...+++|++++    + .++++..++....  ..+.+||.+.+++|+.++... ..++++
T Consensus       297 g~V~vS~GS~~~~~~~~~~~~~~~l~a~~~l----~-~~viw~~~~~~~~--~~~p~Nv~i~~w~Pq~~lL~h-p~v~~f  368 (507)
T PHA03392        297 GVVYVSFGSSIDTNDMDNEFLQMLLRTFKKL----P-YNVLWKYDGEVEA--INLPANVLTQKWFPQRAVLKH-KNVKAF  368 (507)
T ss_pred             cEEEEECCCCCcCCCCCHHHHHHHHHHHHhC----C-CeEEEEECCCcCc--ccCCCceEEecCCCHHHHhcC-CCCCEE
Confidence            377778888753     22345566666655    3 4665554433222  345689999999998654322 568889


Q ss_pred             EeCCCCCCCCChHHHHHHHcCCcEEecCCCCCcc---ceeeeCcceEEECC---CHHHHHHHHHHHHHcCcHHHHHHH
Q 039338          386 VNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKG---TIVVDDEFGFMFAP---NVESLHKTLEAAVSEGPMRLAQRG  457 (493)
Q Consensus       386 v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~---e~v~~~~~G~~~~~---d~~~l~~~i~~ll~~~~~~~~~~~  457 (493)
                      |.   + .| ..++.||+.+|+|+|+....+-..   ..+++.+.|..++.   +.+++.++|.++++| ++.+++..
T Consensus       369 It---H-GG-~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~~G~G~~l~~~~~t~~~l~~ai~~vl~~-~~y~~~a~  440 (507)
T PHA03392        369 VT---Q-GG-VQSTDEAIDALVPMVGLPMMGDQFYNTNKYVELGIGRALDTVTVSAAQLVLAIVDVIEN-PKYRKNLK  440 (507)
T ss_pred             Ee---c-CC-cccHHHHHHcCCCEEECCCCccHHHHHHHHHHcCcEEEeccCCcCHHHHHHHHHHHhCC-HHHHHHHH
Confidence            85   2 33 459999999999999987543110   23455677888764   789999999999988 55544433

>PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases

Probab=99.01  E-value=1.8e-08  Score=85.95  Aligned_cols=168  Identities=15%  Similarity=0.178  Sum_probs=103.8

Q ss_pred             EEEEEecc-CCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCCCcc-c
Q 039338           85 KIAVFSRK-WPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEADKW-R  162 (493)
Q Consensus        85 kIl~v~~~-~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  162 (493)
                      ||+++... .|.  ..||.|+++.+|+..|+++||+|+|+|.....  ......       ..+...+++.....+.. .
T Consensus         3 kIaIiGtrGIPa--~YGGfET~ve~L~~~l~~~g~~v~Vyc~~~~~--~~~~~~-------y~gv~l~~i~~~~~g~~~s   71 (185)
T PF09314_consen    3 KIAIIGTRGIPA--RYGGFETFVEELAPRLVSKGIDVTVYCRSDYY--PYKEFE-------YNGVRLVYIPAPKNGSAES   71 (185)
T ss_pred             eEEEEeCCCCCc--ccCcHHHHHHHHHHHHhcCCceEEEEEccCCC--CCCCcc-------cCCeEEEEeCCCCCCchHH
Confidence            59999884 554  89999999999999999999999999987654  111111       12222233322222211 1


Q ss_pred             cccchHHHHHHh---c--CCCCcEEEeCccch---hHHhhh-----ccCcEEEEeccchhhhhhhhhhhhhhcCCCCccc
Q 039338          163 YSKGWEQFDEEN---Q--REPFDVVHSESVAL---PHWLAR-----NVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMS  229 (493)
Q Consensus       163 ~~~~~~~~~~~~---~--~~~~DiI~~~~~~~---~~~~~~-----~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~  229 (493)
                      ..-.+..+...+   +  +.+.||+++++...   ...+.+     +.+ +++..||+.+..                  
T Consensus        72 i~yd~~sl~~al~~~~~~~~~~~ii~ilg~~~g~~~~~~~r~~~~~g~~-v~vN~DGlEWkR------------------  132 (185)
T PF09314_consen   72 IIYDFLSLLHALRFIKQDKIKYDIILILGYGIGPFFLPFLRKLRKKGGK-VVVNMDGLEWKR------------------  132 (185)
T ss_pred             HHHHHHHHHHHHHHHhhccccCCEEEEEcCCccHHHHHHHHhhhhcCCc-EEECCCcchhhh------------------
Confidence            111122222222   1  34688999887642   222222     224 899999975432                  


Q ss_pred             hHhHhHHHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCcc
Q 039338          230 LAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGIN  286 (493)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd  286 (493)
                      .+|.... +...+ +.|+...+.+|.+|+.|+.+++++.++|+  ..+..+|++|.|
T Consensus       133 ~KW~~~~-k~~lk-~~E~~avk~ad~lIaDs~~I~~y~~~~y~--~~~s~~IaYGad  185 (185)
T PF09314_consen  133 AKWGRPA-KKYLK-FSEKLAVKYADRLIADSKGIQDYIKERYG--RKKSTFIAYGAD  185 (185)
T ss_pred             hhcCHHH-HHHHH-HHHHHHHHhCCEEEEcCHHHHHHHHHHcC--CCCcEEecCCCC
Confidence            1222222 22222 23556678999999999999999999986  468899999976

>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed

Probab=98.99  E-value=3.6e-08  Score=98.46  Aligned_cols=323  Identities=12%  Similarity=0.148  Sum_probs=181.5

Q ss_pred             eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCCCcccc
Q 039338           84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEADKWRY  163 (493)
Q Consensus        84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (493)
                      -||.+++.      +.+| ..+...|+++|.++.-++.+....++.+.....+..-+.    .....+-+....+.....
T Consensus       227 ~kIfI~AG------E~SG-DlhgA~Li~aLk~~~P~i~~~GvGG~~M~aaG~e~l~d~----~eLsVmG~~EVL~~l~~l  295 (608)
T PRK01021        227 TSCFISAG------EHSG-DTLGGNLLKEIKALYPDIHCFGVGGPQMRAEGFHPLFNM----EEFQVSGFWEVLLALFKL  295 (608)
T ss_pred             CeEEEEec------cccH-HHHHHHHHHHHHhcCCCcEEEEEccHHHHhCcCcccCCh----HHhhhhhHHHHHHHHHHH
Confidence            47998886      3455 567888999999987788888777666333222221111    000001111111122233


Q ss_pred             ccchHHHHHHhcCCCCcEEEeCcc-chhHHhhhccCcE---EEEeccchhhhhhhhhhhhhhcCCCCccchHhHhHHHHH
Q 039338          164 SKGWEQFDEENQREPFDVVHSESV-ALPHWLARNVTNL---AVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQGV  239 (493)
Q Consensus       164 ~~~~~~~~~~~~~~~~DiI~~~~~-~~~~~~~~~~p~~---v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (493)
                      .+..+.+.+.+.+.+||++++-+. .+...+++.+.+.   +-.+|-+.+.     +|.             |+....+ 
T Consensus       296 ~~~~~~l~~~i~~~kPD~vIlID~PgFNlrLAK~lkk~Gi~ipviyYVsPq-----VWA-------------WR~~Rik-  356 (608)
T PRK01021        296 WYRYRKLYKTILKTNPRTVICIDFPDFHFLLIKKLRKRGYKGKIVHYVCPS-----IWA-------------WRPKRKT-  356 (608)
T ss_pred             HHHHHHHHHHHHhcCCCEEEEeCCCCCCHHHHHHHHhcCCCCCEEEEECcc-----cee-------------eCcchHH-
Confidence            444556666667889999987543 3333233221110   1122221111     110             0011111 


Q ss_pred             HHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCCCCCCcEEEEEecc
Q 039338          240 MLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVAGR  319 (493)
Q Consensus       240 ~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Gr  319 (493)
                              .+-+.+|+++|+=+...+.+++ +|+   ++..+.|+.-... . .....+..++++|++++++++-+..|+
T Consensus       357 --------ki~k~vD~ll~IfPFE~~~y~~-~gv---~v~yVGHPL~d~i-~-~~~~~~~~r~~lgl~~~~~iIaLLPGS  422 (608)
T PRK01021        357 --------ILEKYLDLLLLILPFEQNLFKD-SPL---RTVYLGHPLVETI-S-SFSPNLSWKEQLHLPSDKPIVAAFPGS  422 (608)
T ss_pred             --------HHHHHhhhheecCccCHHHHHh-cCC---CeEEECCcHHhhc-c-cCCCHHHHHHHcCCCCCCCEEEEECCC
Confidence                    2234568899999999999988 565   5777777753321 1 122345678899998777677677775


Q ss_pred             cc-c-ccChHHHHHHHH--HHHhhCCCeEEEEEeCCCc-HHHHhhhc--C---cEEEecCCCHHHHHHHHHHcCEEEeCC
Q 039338          320 LV-K-DKGHPLLHEAFS--KLMVKYPDVYLIVAGSGPW-EQRYKDFG--H---QVLVMGSMSPAELRAFYNAIDIFVNPT  389 (493)
Q Consensus       320 ~~-~-~Kg~~~ll~a~~--~l~~~~~~~~l~i~G~g~~-~~~~~~l~--~---~V~~~g~~~~~~~~~~~~~adv~v~ps  389 (493)
                      =. + .+..+.++++++  .+.+   +.++++....+. .+.+++.-  .   .+.+...   ++-.+++++||+.+..|
T Consensus       423 R~~EI~rllPv~l~aa~~~~l~~---~l~fvvp~a~~~~~~~i~~~~~~~~~~~~~ii~~---~~~~~~m~aaD~aLaaS  496 (608)
T PRK01021        423 RRGDILRNLTIQVQAFLASSLAS---THQLLVSSANPKYDHLILEVLQQEGCLHSHIVPS---QFRYELMRECDCALAKC  496 (608)
T ss_pred             CHHHHHHHHHHHHHHHHHHHhcc---CeEEEEecCchhhHHHHHHHHhhcCCCCeEEecC---cchHHHHHhcCeeeecC
Confidence            32 2 456778888887  5543   577877543322 33444322  1   2233321   12369999999999765


Q ss_pred             CCCCCCChHHHHHHHcCCcEEec-CCC------------------CCccceeeeCc-ceEEE---CC-CHHHHHHHHHHH
Q 039338          390 LRPQGLDLTLMEAMMSGKPVMAS-RFP------------------SIKGTIVVDDE-FGFMF---AP-NVESLHKTLEAA  445 (493)
Q Consensus       390 ~~~eg~~~~~~EAm~~G~PvI~s-~~~------------------~~~~e~v~~~~-~G~~~---~~-d~~~l~~~i~~l  445 (493)
                            |++.+|++.+|+|.|+. +..                  +++ .++.+.+ .--++   +. +++.+++++ ++
T Consensus       497 ------GTaTLEaAL~g~PmVV~YK~s~Lty~Iak~Lvki~i~yIsLp-NIIagr~VvPEllqgQ~~~tpe~La~~l-~l  568 (608)
T PRK01021        497 ------GTIVLETALNQTPTIVTCQLRPFDTFLAKYIFKIILPAYSLP-NIILGSTIFPEFIGGKKDFQPEEVAAAL-DI  568 (608)
T ss_pred             ------CHHHHHHHHhCCCEEEEEecCHHHHHHHHHHHhccCCeeehh-HHhcCCCcchhhcCCcccCCHHHHHHHH-HH
Confidence                  78999999999999885 221                  111 1121111 11122   23 899999996 88


Q ss_pred             HHcCcHHHHHHHHHHHHHHH
Q 039338          446 VSEGPMRLAQRGEACRQYAA  465 (493)
Q Consensus       446 l~~~~~~~~~~~~~~~~~~~  465 (493)
                      +.| ++.++++.+...+..+
T Consensus       569 L~d-~~~r~~~~~~l~~lr~  587 (608)
T PRK01021        569 LKT-SQSKEKQKDACRDLYQ  587 (608)
T ss_pred             hcC-HHHHHHHHHHHHHHHH
Confidence            887 6666666665554433

>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria

Probab=98.84  E-value=1.4e-07  Score=92.58  Aligned_cols=194  Identities=15%  Similarity=0.249  Sum_probs=107.8

Q ss_pred             HhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCCCCCCcEEEEEecccccccCh-
Q 039338          248 RFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVAGRLVKDKGH-  326 (493)
Q Consensus       248 ~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Gr~~~~Kg~-  326 (493)
                      ......|.+++.|+...+.+.+.++.+.+++.+...+-....+.........+++.++++.++ .+|+|+-.+...... 
T Consensus       130 ~~~~~~d~~~~~s~~~~~~~~~~f~~~~~~i~~~G~PR~D~l~~~~~~~~~~i~~~~~~~~~~-k~ILyaPT~R~~~~~~  208 (369)
T PF04464_consen  130 RNYRNYDYFIVSSEFEKEIFKKAFGYPEDKILVTGYPRNDYLFNKSKENRNRIKKKLGIDKDK-KVILYAPTWRDNSSNE  208 (369)
T ss_dssp             HHHTT-SEEEESSHHHHHHHHHHTT--GGGEEES--GGGHHHHHSTT-HHHHHHHHTT--SS--EEEEEE----GGG--G
T ss_pred             hhccCCcEEEECCHHHHHHHHHHhccCcceEEEeCCCeEhHHhccCHHHHHHHHHHhccCCCC-cEEEEeeccccccccc
Confidence            346688999999999999999999988777766554433333333333356788889998887 477788766542222 


Q ss_pred             -----HHH--HHHHHHHHhhCCCeEEEEEeCCCcHHHHh---hhcCcEEEecCCCHHHHHHHHHHcCEEEeCCCCCCCCC
Q 039338          327 -----PLL--HEAFSKLMVKYPDVYLIVAGSGPWEQRYK---DFGHQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLD  396 (493)
Q Consensus       327 -----~~l--l~a~~~l~~~~~~~~l~i~G~g~~~~~~~---~l~~~V~~~g~~~~~~~~~~~~~adv~v~ps~~~eg~~  396 (493)
                           ...  .+.+..+  ...++.+++-..........   ...++|.+...-  +++.+++..||++|.      -++
T Consensus       209 ~~~~~~~~~~~~~l~~~--~~~~~~li~k~Hp~~~~~~~~~~~~~~~i~~~~~~--~~~~~ll~~aDiLIT------DyS  278 (369)
T PF04464_consen  209 YFKFFFSDLDFEKLNFL--LKNNYVLIIKPHPNMKKKFKDFKEDNSNIIFVSDN--EDIYDLLAAADILIT------DYS  278 (369)
T ss_dssp             GSS----TT-HHHHHHH--HTTTEEEEE--SHHHHTT----TT-TTTEEE-TT---S-HHHHHHT-SEEEE------SS-
T ss_pred             cccccccccCHHHHHHH--hCCCcEEEEEeCchhhhchhhhhccCCcEEECCCC--CCHHHHHHhcCEEEE------ech
Confidence                 112  2333322  23588888876533222222   233777776654  489999999999994      235


Q ss_pred             hHHHHHHHcCCcEEec--CCCCCcc--ce---eeeCcceEEECCCHHHHHHHHHHHHHcCcHHHH
Q 039338          397 LTLMEAMMSGKPVMAS--RFPSIKG--TI---VVDDEFGFMFAPNVESLHKTLEAAVSEGPMRLA  454 (493)
Q Consensus       397 ~~~~EAm~~G~PvI~s--~~~~~~~--e~---v~~~~~G~~~~~d~~~l~~~i~~ll~~~~~~~~  454 (493)
                      .+++|++.+++|||-.  |......  .+   ..+...|-.+. +.++|.++|.+++++ .+...
T Consensus       279 Si~fD~~~l~KPiify~~D~~~Y~~~rg~~~~~~~~~pg~~~~-~~~eL~~~i~~~~~~-~~~~~  341 (369)
T PF04464_consen  279 SIIFDFLLLNKPIIFYQPDLEEYEKERGFYFDYEEDLPGPIVY-NFEELIEAIENIIEN-PDEYK  341 (369)
T ss_dssp             THHHHHGGGT--EEEE-TTTTTTTTTSSBSS-TTTSSSS-EES-SHHHHHHHHTTHHHH-HHHTH
T ss_pred             hHHHHHHHhCCCEEEEeccHHHHhhccCCCCchHhhCCCceeC-CHHHHHHHHHhhhhC-CHHHH
Confidence            5999999999999964  3211110  01   12334455555 899999999999887 54433

They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.

>PRK10017 colanic acid biosynthesis protein; Provisional

Probab=98.76  E-value=3.7e-05  Score=75.76  Aligned_cols=201  Identities=11%  Similarity=0.095  Sum_probs=109.3

Q ss_pred             HhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcc---cchhhhhhhCCCCCCcEEEEEecccccc-
Q 039338          248 RFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLS---LGQSFRSRIGIPKNASLVLGVAGRLVKD-  323 (493)
Q Consensus       248 ~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~---~~~~~r~~~~i~~~~~~~i~~~Gr~~~~-  323 (493)
                      .+++++|.|.+=.+...+.+.+ .|++..++.+.+..+=.  +.+...   ....+...++....++.+-+.+..+.+. 
T Consensus       172 ~vl~~~~~ItvRD~~S~~~Lk~-lGv~~~~v~~~aDpAF~--L~~~~~~~~~~~~~~~~~~~~~~~~~Vgisvr~~~~~~  248 (426)
T PRK10017        172 YVFGHCDALILRESVSLDLMKR-SNITTAKVEHGVDTAWL--VDHHTEDFTASYAVQHWLDVAAQQKTVAITLRELAPFD  248 (426)
T ss_pred             HHHhcCCEEEEccHHHHHHHHH-hCCCccceEEecChhhh--CCccccccccchhhhhhhcccccCCEEEEEeccccccc
Confidence            5578999999999999998877 69887778776643211  111100   0001111222223333333333333211 


Q ss_pred             c-------C-hHHHHHHHHHHHhhCCCeEEEEEeC-----CCc-HHHHhhh----c--CcE-EEecCCCHHHHHHHHHHc
Q 039338          324 K-------G-HPLLHEAFSKLMVKYPDVYLIVAGS-----GPW-EQRYKDF----G--HQV-LVMGSMSPAELRAFYNAI  382 (493)
Q Consensus       324 K-------g-~~~ll~a~~~l~~~~~~~~l~i~G~-----g~~-~~~~~~l----~--~~V-~~~g~~~~~~~~~~~~~a  382 (493)
                      +       . ...+.+++..+.+++-++.|+-.-.     ++. ....+++    .  .++ .+.+..+..++..+++++
T Consensus       249 ~~~~~~~~~Y~~~la~~i~~Li~~g~~Vv~lp~~~~~~~~~~dD~~~~~~l~~~~~~~~~~~vi~~~~~~~e~~~iIs~~  328 (426)
T PRK10017        249 KRLGTTQQAYEKAFAGVVNRIIDEGYQVIALSTCTGIDSYNKDDRMVALNLRQHVSDPARYHVVMDELNDLEMGKILGAC  328 (426)
T ss_pred             ccccccHHHHHHHHHHHHHHHHHCCCeEEEEecccCccCCCCchHHHHHHHHHhcccccceeEecCCCChHHHHHHHhhC
Confidence            1       1 1345566676666543444333211     122 1212222    2  223 334445567899999999


Q ss_pred             CEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCccceeee-CcceEEEC--C-CHHHHHHHHHHHHHcCcHHHHHHHH
Q 039338          383 DIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVD-DEFGFMFA--P-NVESLHKTLEAAVSEGPMRLAQRGE  458 (493)
Q Consensus       383 dv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~-~~~G~~~~--~-d~~~l~~~i~~ll~~~~~~~~~~~~  458 (493)
                      |++|-.-++      .++=|++.|+|+|+-....=...+..+ +...++++  . +.++|.+.+.+++++ .+.+++.-+
T Consensus       329 dl~ig~RlH------a~I~a~~~gvP~i~i~Y~~K~~~~~~~lg~~~~~~~~~~l~~~~Li~~v~~~~~~-r~~~~~~l~  401 (426)
T PRK10017        329 ELTVGTRLH------SAIISMNFGTPAIAINYEHKSAGIMQQLGLPEMAIDIRHLLDGSLQAMVADTLGQ-LPALNARLA  401 (426)
T ss_pred             CEEEEecch------HHHHHHHcCCCEEEeeehHHHHHHHHHcCCccEEechhhCCHHHHHHHHHHHHhC-HHHHHHHHH
Confidence            999965544      677799999999987542211112211 11223333  3 788999999999998 555444333

>PLN02448 UDP-glycosyltransferase family protein

Probab=98.75  E-value=3.1e-05  Score=77.84  Aligned_cols=202  Identities=13%  Similarity=0.061  Sum_probs=105.6

Q ss_pred             hhccCCeEEEcChh-HHHHHHHHhCC-CCCcEEEecCCccCCCcc--C----CcccchhhhhhhCCCCCCcEEEEEeccc
Q 039338          249 FFNKYAHHVAISDS-CGEMLRDVYQI-PSERVHVILNGINENEYG--V----DLSLGQSFRSRIGIPKNASLVLGVAGRL  320 (493)
Q Consensus       249 ~~~~~d~ii~~S~~-~~~~~~~~~~~-~~~~v~vi~ngvd~~~~~--~----~~~~~~~~r~~~~i~~~~~~~i~~~Gr~  320 (493)
                      ...+++.|++.|-+ +...+.+.+.- -..++..|.+-+......  .    .......+.+-+.-.+.++.+++..|..
T Consensus       205 ~~~~~~~vlvNTf~eLE~~~~~~l~~~~~~~~~~iGP~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vvyvsfGs~  284 (459)
T PLN02448        205 WVPKAQYLLFTSFYELEAQAIDALKSKFPFPVYPIGPSIPYMELKDNSSSSNNEDNEPDYFQWLDSQPEGSVLYVSLGSF  284 (459)
T ss_pred             hcccCCEEEEccHHHhhHHHHHHHHhhcCCceEEecCcccccccCCCccccccccchhHHHHHHcCCCCCceEEEeeccc
Confidence            34567899998877 33332332210 012455555433210000  0    0000012333333333444777788887


Q ss_pred             cc--ccChHHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhh-hcCcEEEecCCCHHHHHHHHHHcCEEEeCCCCCCCCCh
Q 039338          321 VK--DKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKD-FGHQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDL  397 (493)
Q Consensus       321 ~~--~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~-l~~~V~~~g~~~~~~~~~~~~~adv~v~ps~~~eg~~~  397 (493)
                      ..  ...+..++++++..     +..++++..++. ..+.+ ..+++.+.+++|+.++.   +..++..+-+ + .| .+
T Consensus       285 ~~~~~~~~~~~~~~l~~~-----~~~~lw~~~~~~-~~~~~~~~~~~~v~~w~pQ~~iL---~h~~v~~fvt-H-gG-~n  352 (459)
T PLN02448        285 LSVSSAQMDEIAAGLRDS-----GVRFLWVARGEA-SRLKEICGDMGLVVPWCDQLKVL---CHSSVGGFWT-H-CG-WN  352 (459)
T ss_pred             ccCCHHHHHHHHHHHHhC-----CCCEEEEEcCch-hhHhHhccCCEEEeccCCHHHHh---ccCccceEEe-c-Cc-hh
Confidence            43  22234444444433     456665544331 12223 23678888999888654   4566633323 2 34 45


Q ss_pred             HHHHHHHcCCcEEecCCCCCcc---ceeeeC-cceEEEC-------C-CHHHHHHHHHHHHHcCcHHHHHHHHHHHH
Q 039338          398 TLMEAMMSGKPVMASRFPSIKG---TIVVDD-EFGFMFA-------P-NVESLHKTLEAAVSEGPMRLAQRGEACRQ  462 (493)
Q Consensus       398 ~~~EAm~~G~PvI~s~~~~~~~---e~v~~~-~~G~~~~-------~-d~~~l~~~i~~ll~~~~~~~~~~~~~~~~  462 (493)
                      +++||+++|+|+|+-...+-..   ..+.+. +.|+-+.       . +.+++.+++++++.++.+.-+++++++.+
T Consensus       353 S~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~l~~av~~vl~~~~~~~~~~r~~a~~  429 (459)
T PLN02448        353 STLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWRVKREVGEETLVGREEIAELVKRFMDLESEEGKEMRRRAKE  429 (459)
T ss_pred             HHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEEecccccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHH
Confidence            9999999999999986543110   123332 3455552       2 77999999999998622333444444443

>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]

Probab=98.68  E-value=1.2e-06  Score=77.80  Aligned_cols=285  Identities=13%  Similarity=0.107  Sum_probs=144.2

Q ss_pred             eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCCCcccc
Q 039338           84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEADKWRY  163 (493)
Q Consensus        84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (493)
                      |||+|++...+.  ..+|.-.++..|+++|.++|+.+..++.+...  ......          ...+....        
T Consensus         1 M~V~i~~Dgg~~--iGmGHV~R~l~LA~~l~k~~~~~~fl~k~~~e--~~~~~~----------~~~f~~~~--------   58 (318)
T COG3980           1 MKVLIRCDGGLE--IGMGHVMRTLTLARELEKRGFACLFLTKQDIE--AIIHKV----------YEGFKVLE--------   58 (318)
T ss_pred             CcEEEEecCCcc--cCcchhhhHHHHHHHHHhcCceEEEecccchh--hhhhhh----------hhhcccee--------
Confidence            899999997653  77888889999999999999888888876533  100000          00000000        


Q ss_pred             ccchHHHHHHhcCCCCcEEEeCccchhHHhhhccC----cEEEEeccchhhhhhhhhhhhhhcCCCCccchHhHhHHHHH
Q 039338          164 SKGWEQFDEENQREPFDVVHSESVALPHWLARNVT----NLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQGV  239 (493)
Q Consensus       164 ~~~~~~~~~~~~~~~~DiI~~~~~~~~~~~~~~~p----~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (493)
                          ......+++.++|++++.++++..-..+.+.    +.++.+-+.....+                           
T Consensus        59 ----~~~~n~ik~~k~d~lI~Dsygl~~dd~k~ik~e~~~k~l~fDd~~~~~~---------------------------  107 (318)
T COG3980          59 ----GRGNNLIKEEKFDLLIFDSYGLNADDFKLIKEEAGSKILIFDDENAKSF---------------------------  107 (318)
T ss_pred             ----eecccccccccCCEEEEeccCCCHHHHHHHHHHhCCcEEEecCCCccch---------------------------
Confidence                0001145588999999998876654433321    12333332211100                           


Q ss_pred             HHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCCCCCCcEEEEEecc
Q 039338          240 MLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVAGR  319 (493)
Q Consensus       240 ~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Gr  319 (493)
                                   +|....++.... . .+.|+.-+.+.. +..|.+.....+.   =...|++.-..+.. -+++..|.
T Consensus       108 -------------~d~d~ivN~~~~-a-~~~y~~v~~k~~-~~lGp~y~~lr~e---F~~~r~~~~~r~~r-~ilI~lGG  167 (318)
T COG3980         108 -------------KDNDLIVNAILN-A-NDYYGLVPNKTR-YYLGPGYAPLRPE---FYALREENTERPKR-DILITLGG  167 (318)
T ss_pred             -------------hhhHhhhhhhhc-c-hhhccccCcceE-EEecCCceeccHH---HHHhHHHHhhcchh-eEEEEccC
Confidence                         011111111111 1 112343333432 2334332211111   01122222112122 24556665


Q ss_pred             cccccChHHHHHHHHHHHhhCCCeEEEEEeCC-CcHHHHhh---hcCcEEEecCCCHHHHHHHHHHcCEEEeCCCCCCCC
Q 039338          320 LVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSG-PWEQRYKD---FGHQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGL  395 (493)
Q Consensus       320 ~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g-~~~~~~~~---l~~~V~~~g~~~~~~~~~~~~~adv~v~ps~~~eg~  395 (493)
                      -+ .|+  +.+++++.+.+..-+++++ +|++ +....+++   ..+++.++-..  ++++++|..||..+..      -
T Consensus       168 sD-pk~--lt~kvl~~L~~~~~nl~iV-~gs~~p~l~~l~k~~~~~~~i~~~~~~--~dma~LMke~d~aI~A------a  235 (318)
T COG3980         168 SD-PKN--LTLKVLAELEQKNVNLHIV-VGSSNPTLKNLRKRAEKYPNINLYIDT--NDMAELMKEADLAISA------A  235 (318)
T ss_pred             CC-hhh--hHHHHHHHhhccCeeEEEE-ecCCCcchhHHHHHHhhCCCeeeEecc--hhHHHHHHhcchheec------c
Confidence            43 344  3567777776653234333 3432 33333333   23788777665  7999999999999952      3


Q ss_pred             ChHHHHHHHcCCcEEecCC----CCCccceeee----CcceEEECCCHHHHHHHHHHHHHcCcHHHHHHH
Q 039338          396 DLTLMEAMMSGKPVMASRF----PSIKGTIVVD----DEFGFMFAPNVESLHKTLEAAVSEGPMRLAQRG  457 (493)
Q Consensus       396 ~~~~~EAm~~G~PvI~s~~----~~~~~e~v~~----~~~G~~~~~d~~~l~~~i~~ll~~~~~~~~~~~  457 (493)
                      |.++.||+..|+|.++-..    -... .....    ...|+-.  ..+.....+.++..| ...++.+.
T Consensus       236 GstlyEa~~lgvP~l~l~~a~NQ~~~a-~~f~~lg~~~~l~~~l--~~~~~~~~~~~i~~d-~~~rk~l~  301 (318)
T COG3980         236 GSTLYEALLLGVPSLVLPLAENQIATA-KEFEALGIIKQLGYHL--KDLAKDYEILQIQKD-YARRKNLS  301 (318)
T ss_pred             chHHHHHHHhcCCceEEeeeccHHHHH-HHHHhcCchhhccCCC--chHHHHHHHHHhhhC-HHHhhhhh
Confidence            6799999999999433211    1111 00100    1122221  336666777777777 55554443

>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like

Probab=98.64  E-value=4.8e-07  Score=75.27  Aligned_cols=102  Identities=22%  Similarity=0.187  Sum_probs=62.8

Q ss_pred             EEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeec-CCCCcccc
Q 039338           85 KIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHE-GEADKWRY  163 (493)
Q Consensus        85 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  163 (493)
                      ||++++...         +.++.++++.|.++|+||++++.....  . ....        .....+.... ........
T Consensus         1 KIl~i~~~~---------~~~~~~~~~~L~~~g~~V~ii~~~~~~--~-~~~~--------~~~i~~~~~~~~~k~~~~~   60 (139)
T PF13477_consen    1 KILLIGNTP---------STFIYNLAKELKKRGYDVHIITPRNDY--E-KYEI--------IEGIKVIRLPSPRKSPLNY   60 (139)
T ss_pred             CEEEEecCc---------HHHHHHHHHHHHHCCCEEEEEEcCCCc--h-hhhH--------hCCeEEEEecCCCCccHHH
Confidence            689998742         347889999999999999999995443  1 1111        1111112221 11122333


Q ss_pred             ccchHHHHHHhcCCCCcEEEeCccc---hhHHhh---hc-cCcEEEEeccch
Q 039338          164 SKGWEQFDEENQREPFDVVHSESVA---LPHWLA---RN-VTNLAVSWHGIA  208 (493)
Q Consensus       164 ~~~~~~~~~~~~~~~~DiI~~~~~~---~~~~~~---~~-~p~~v~~~h~~~  208 (493)
                      .. ...+.+.+++.+||+||+|+..   +.+.++   .+ .| ++.+.||..
T Consensus        61 ~~-~~~l~k~ik~~~~DvIh~h~~~~~~~~~~l~~~~~~~~~-~i~~~hg~~  110 (139)
T PF13477_consen   61 IK-YFRLRKIIKKEKPDVIHCHTPSPYGLFAMLAKKLLKNKK-VIYTVHGSD  110 (139)
T ss_pred             HH-HHHHHHHhccCCCCEEEEecCChHHHHHHHHHHHcCCCC-EEEEecCCe
Confidence            33 3477888889999999999853   223222   23 45 999999853

>PLN02208 glycosyltransferase family protein

Probab=98.54  E-value=0.00029  Score=70.15  Aligned_cols=206  Identities=12%  Similarity=0.020  Sum_probs=112.1

Q ss_pred             hhccCCeEEEcChhHHH-HHHHHhCCC-CCcEEEecCCccCCCccCCcccchhhhhhhCCCCCCcEEEEEecccccccCh
Q 039338          249 FFNKYAHHVAISDSCGE-MLRDVYQIP-SERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVAGRLVKDKGH  326 (493)
Q Consensus       249 ~~~~~d~ii~~S~~~~~-~~~~~~~~~-~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Gr~~~~Kg~  326 (493)
                      .+.++|.+++.|-...+ .+.+.+.-+ ..++..|..-.....  .......++.+-+.-.+.+..+++.+|+... -..
T Consensus       190 ~~~~~~~vl~Ntf~eLE~~~~~~~~~~~~~~v~~vGpl~~~~~--~~~~~~~~~~~wLd~~~~~sVvyvSfGS~~~-l~~  266 (442)
T PLN02208        190 GLKSCDVIALRTCKEIEGKFCDYISRQYHKKVLLTGPMFPEPD--TSKPLEEQWSHFLSGFPPKSVVFCSLGSQII-LEK  266 (442)
T ss_pred             hhccCCEEEEECHHHHHHHHHHHHHhhcCCCEEEEeecccCcC--CCCCCHHHHHHHHhcCCCCcEEEEecccccc-CCH
Confidence            45689999998865544 333323211 135655554321110  0011123444555444444578888998763 234


Q ss_pred             HHHHHHHHHHHhhCCCeEEEEEeC-C--CcH-----HHHhh-hcCcEEEecCCCHHHHHHHHHHcCEEEeCCCCCCCCCh
Q 039338          327 PLLHEAFSKLMVKYPDVYLIVAGS-G--PWE-----QRYKD-FGHQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDL  397 (493)
Q Consensus       327 ~~ll~a~~~l~~~~~~~~l~i~G~-g--~~~-----~~~~~-l~~~V~~~g~~~~~~~~~~~~~adv~v~ps~~~eg~~~  397 (493)
                      +.+.+.+..+...+-.+.+++--. +  ...     ...++ .+.++.+.++.|+.+   +++...+.++-| + .| -+
T Consensus       267 ~q~~e~~~~l~~s~~pf~wv~r~~~~~~~~~~~lp~~f~~r~~~~g~~v~~W~PQ~~---iL~H~~v~~Fvt-H-cG-~n  340 (442)
T PLN02208        267 DQFQELCLGMELTGLPFLIAVKPPRGSSTVQEGLPEGFEERVKGRGVVWGGWVQQPL---ILDHPSIGCFVN-H-CG-PG  340 (442)
T ss_pred             HHHHHHHHHHHhCCCcEEEEEeCCCcccchhhhCCHHHHHHHhcCCcEeeccCCHHH---HhcCCccCeEEc-c-CC-ch
Confidence            456666555533323343333211 1  111     11111 126888889999886   455566544445 2 34 46


Q ss_pred             HHHHHHHcCCcEEecCCCCCc---cceeee-CcceEEEC------CCHHHHHHHHHHHHHcCcHHHHHHHHHHHHH
Q 039338          398 TLMEAMMSGKPVMASRFPSIK---GTIVVD-DEFGFMFA------PNVESLHKTLEAAVSEGPMRLAQRGEACRQY  463 (493)
Q Consensus       398 ~~~EAm~~G~PvI~s~~~~~~---~e~v~~-~~~G~~~~------~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~  463 (493)
                      +++||+++|+|+|+...-+-.   ...+.+ -+.|+.+.      .+.+++.++|.++++++.+..+++.+++++.
T Consensus       341 S~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~~~~~~~~~l~~ai~~~m~~~~e~g~~~r~~~~~~  416 (442)
T PLN02208        341 TIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVSREKTGWFSKESLSNAIKSVMDKDSDLGKLVRSNHTKL  416 (442)
T ss_pred             HHHHHHHcCCCEEecCcchhhHHHHHHHHHHhceeEEeccccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHH
Confidence            999999999999998643211   012222 35676663      2678999999999987324445555555543

>COG4671 Predicted glycosyl transferase [General function prediction only]

Probab=98.54  E-value=1.6e-05  Score=73.16  Aligned_cols=317  Identities=15%  Similarity=0.100  Sum_probs=162.1

Q ss_pred             CceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhC--CCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCCC
Q 039338           82 FTLKIAVFSRKWPISTTPGGMERHAHTLHVALARR--GHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEAD  159 (493)
Q Consensus        82 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~--G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (493)
                      +.|||++.+++.    ..=|.-+++..++.+|.+.  |++|.+++.....-.-+...-.+.+     ..+.+...  ..+
T Consensus         8 ~~~Ri~~Yshd~----~GlGHlrR~~~Ia~aLv~d~~~~~Il~IsG~~~~~~F~~~~gVd~V-----~LPsl~k~--~~G   76 (400)
T COG4671           8 KRPRILFYSHDL----LGLGHLRRALRIAHALVEDYLGFDILIISGGPPAGGFPGPAGVDFV-----KLPSLIKG--DNG   76 (400)
T ss_pred             ccceEEEEehhh----ccchHHHHHHHHHHHHhhcccCceEEEEeCCCccCCCCCcccCceE-----ecCceEec--CCC
Confidence            456999999853    4457788899999999998  9999999987654111110111100     00111100  001


Q ss_pred             cccc------ccch-----HHHHHHhcCCCCcEEEeCccchh---------HHhhhccCcEEEEeccchhhhhhhhhhhh
Q 039338          160 KWRY------SKGW-----EQFDEENQREPFDVVHSESVALP---------HWLARNVTNLAVSWHGIALESLQSGIFQD  219 (493)
Q Consensus       160 ~~~~------~~~~-----~~~~~~~~~~~~DiI~~~~~~~~---------~~~~~~~p~~v~~~h~~~~~~~~~~~~~~  219 (493)
                      .+..      ....     ..+....+..+|||+++...++.         .++...-++.+.-+.++.      |.   
T Consensus        77 ~~~~~d~~~~l~e~~~~Rs~lil~t~~~fkPDi~IVd~~P~Glr~EL~ptL~yl~~~~t~~vL~lr~i~------D~---  147 (400)
T COG4671          77 EYGLVDLDGDLEETKKLRSQLILSTAETFKPDIFIVDKFPFGLRFELLPTLEYLKTTGTRLVLGLRSIR------DI---  147 (400)
T ss_pred             ceeeeecCCCHHHHHHHHHHHHHHHHHhcCCCEEEEeccccchhhhhhHHHHHHhhcCCcceeehHhhh------hc---
Confidence            1100      1111     12333346889999999764322         222222233444443321      00   


Q ss_pred             hhcCCCCccchHhHhHHHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCC-CcEEEecCCccCCCccCCcccch
Q 039338          220 LTRKPLEPMSLAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPS-ERVHVILNGINENEYGVDLSLGQ  298 (493)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~-~~v~vi~ngvd~~~~~~~~~~~~  298 (493)
                          +......+-.......         +-+.+|.|.+..+-.-..+.+.|+++. -+-.+.+.|.=.......+... 
T Consensus       148 ----p~~~~~~w~~~~~~~~---------I~r~yD~V~v~GdP~f~d~~~~~~~~~~i~~k~~ytG~vq~~~~~~~~p~-  213 (400)
T COG4671         148 ----PQELEADWRRAETVRL---------INRFYDLVLVYGDPDFYDPLTEFPFAPAIRAKMRYTGFVQRSLPHLPLPP-  213 (400)
T ss_pred             ----hhhhccchhhhHHHHH---------HHHhheEEEEecCccccChhhcCCccHhhhhheeEeEEeeccCcCCCCCC-
Confidence                0000000011111112         223567777776655544555465432 1334445554311000000000 


Q ss_pred             hhhhhhCCCCCCcEEEEEecccccccChHHH---HHHHHHHHhhCCCeEEEEEeCCCc---HHHHhhhc---CcEEEecC
Q 039338          299 SFRSRIGIPKNASLVLGVAGRLVKDKGHPLL---HEAFSKLMVKYPDVYLIVAGSGPW---EQRYKDFG---HQVLVMGS  369 (493)
Q Consensus       299 ~~r~~~~i~~~~~~~i~~~Gr~~~~Kg~~~l---l~a~~~l~~~~~~~~l~i~G~g~~---~~~~~~l~---~~V~~~g~  369 (493)
                            ....++..+++.+|.=.  -|-+++   ++|...+..-.+ .-+++.|..--   ++.+...+   ++|.+..+
T Consensus       214 ------~~~pE~~~Ilvs~GGG~--dG~eLi~~~l~A~~~l~~l~~-~~~ivtGP~MP~~~r~~l~~~A~~~p~i~I~~f  284 (400)
T COG4671         214 ------HEAPEGFDILVSVGGGA--DGAELIETALAAAQLLAGLNH-KWLIVTGPFMPEAQRQKLLASAPKRPHISIFEF  284 (400)
T ss_pred             ------cCCCccceEEEecCCCh--hhHHHHHHHHHHhhhCCCCCc-ceEEEeCCCCCHHHHHHHHHhcccCCCeEEEEh
Confidence                  01123336677777533  444444   333333322211 23556664322   22333332   78999999


Q ss_pred             CCHHHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCccc-eeee------CcceEEECC--CHHHHHH
Q 039338          370 MSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGT-IVVD------DEFGFMFAP--NVESLHK  440 (493)
Q Consensus       370 ~~~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e-~v~~------~~~G~~~~~--d~~~l~~  440 (493)
                      .  +++..+++.|+..|.-+    |+ +|++|-+++|||.+.-....-.+| ++..      |-...+.+.  +++.|++
T Consensus       285 ~--~~~~~ll~gA~~vVSm~----GY-NTvCeILs~~k~aLivPr~~p~eEQliRA~Rl~~LGL~dvL~pe~lt~~~La~  357 (400)
T COG4671         285 R--NDFESLLAGARLVVSMG----GY-NTVCEILSFGKPALIVPRAAPREEQLIRAQRLEELGLVDVLLPENLTPQNLAD  357 (400)
T ss_pred             h--hhHHHHHHhhheeeecc----cc-hhhhHHHhCCCceEEeccCCCcHHHHHHHHHHHhcCcceeeCcccCChHHHHH
Confidence            7  79999999999999432    33 499999999999887765443322 1111      333445554  7899999


Q ss_pred             HHHHHHHc
Q 039338          441 TLEAAVSE  448 (493)
Q Consensus       441 ~i~~ll~~  448 (493)
                      +|..+++.
T Consensus       358 al~~~l~~  365 (400)
T COG4671         358 ALKAALAR  365 (400)
T ss_pred             HHHhcccC
Confidence            99998884

>COG1817 Uncharacterized protein conserved in archaea [Function unknown]

Probab=98.49  E-value=2.2e-05  Score=71.02  Aligned_cols=297  Identities=11%  Similarity=0.105  Sum_probs=164.9

Q ss_pred             eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCCCcc--
Q 039338           84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEADKW--  161 (493)
Q Consensus        84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  161 (493)
                      |||++=..+       .-..++..++...|.++||+|.+-|.....  ....-.       ..+.+...+........  
T Consensus         1 mkVwiDI~n-------~~hvhfFk~lI~elekkG~ev~iT~rd~~~--v~~LLd-------~ygf~~~~Igk~g~~tl~~   64 (346)
T COG1817           1 MKVWIDIGN-------PPHVHFFKNLIWELEKKGHEVLITCRDFGV--VTELLD-------LYGFPYKSIGKHGGVTLKE   64 (346)
T ss_pred             CeEEEEcCC-------cchhhHHHHHHHHHHhCCeEEEEEEeecCc--HHHHHH-------HhCCCeEeecccCCccHHH
Confidence            667766543       223567889999999999999998877665  111111       01111111111110111  


Q ss_pred             ---ccccchHHHHHHhcCCCCcEEEe-CccchhHH-hhhccCcEEEEeccchhhhhhhhhhhhhhcCCCCccchHhHhHH
Q 039338          162 ---RYSKGWEQFDEENQREPFDVVHS-ESVALPHW-LARNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSL  236 (493)
Q Consensus       162 ---~~~~~~~~~~~~~~~~~~DiI~~-~~~~~~~~-~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (493)
                         ........+.+++.+.+||+.+. |++.++.. +..++| .+......     |+...                   
T Consensus        65 Kl~~~~eR~~~L~ki~~~~kpdv~i~~~s~~l~rvafgLg~p-sIi~~D~e-----hA~~q-------------------  119 (346)
T COG1817          65 KLLESAERVYKLSKIIAEFKPDVAIGKHSPELPRVAFGLGIP-SIIFVDNE-----HAEAQ-------------------  119 (346)
T ss_pred             HHHHHHHHHHHHHHHHhhcCCceEeecCCcchhhHHhhcCCc-eEEecCCh-----hHHHH-------------------
Confidence               11122334566667899999876 44444332 233445 33333221     11111                   


Q ss_pred             HHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCCCCCCcEEEEE
Q 039338          237 QGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGV  316 (493)
Q Consensus       237 ~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~  316 (493)
                               ....++-|+.+++++..-.+.+.+ +|-++.++ +-.||+-.-.....-.....+-+++|+..+.+++++=
T Consensus       120 ---------nkl~~Pla~~ii~P~~~~~~~~~~-~G~~p~~i-~~~~giae~~~v~~f~pd~evlkeLgl~~~~~yIVmR  188 (346)
T COG1817         120 ---------NKLTLPLADVIITPEAIDEEELLD-FGADPNKI-SGYNGIAELANVYGFVPDPEVLKELGLEEGETYIVMR  188 (346)
T ss_pred             ---------hhcchhhhhheecccccchHHHHH-hCCCccce-ecccceeEEeecccCCCCHHHHHHcCCCCCCceEEEe
Confidence                     113456788888888777777666 56554443 3455654322111122234678899999976565542


Q ss_pred             eccc-----ccccChHHHHHHHHHHHhhCCCeEEEEEeC-CCcHHHHhhhcCcEEEecCCCHHHHHHHHHHcCEEEeCCC
Q 039338          317 AGRL-----VKDKGHPLLHEAFSKLMVKYPDVYLIVAGS-GPWEQRYKDFGHQVLVMGSMSPAELRAFYNAIDIFVNPTL  390 (493)
Q Consensus       317 ~Gr~-----~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~-g~~~~~~~~l~~~V~~~g~~~~~~~~~~~~~adv~v~ps~  390 (493)
                      .-.+     ..+++.+.+.++++.+.+.+    .+++-+ ...++..+... +++.....  -+-.+++-.|++++-   
T Consensus       189 pe~~~A~y~~g~~~~~~~~~li~~l~k~g----iV~ipr~~~~~eife~~~-n~i~pk~~--vD~l~Llyya~lvig---  258 (346)
T COG1817         189 PEPWGAHYDNGDRGISVLPDLIKELKKYG----IVLIPREKEQAEIFEGYR-NIIIPKKA--VDTLSLLYYATLVIG---  258 (346)
T ss_pred             eccccceeeccccchhhHHHHHHHHHhCc----EEEecCchhHHHHHhhhc-cccCCccc--ccHHHHHhhhheeec---
Confidence            2221     23567777888888886643    444443 33333333322 22221111  244457778888882   


Q ss_pred             CCCCCChHHHHHHHcCCcEEecCCC---CCccceeeeCcceEEECC-CHHHHHHHHHHHHHc
Q 039338          391 RPQGLDLTLMEAMMSGKPVMASRFP---SIKGTIVVDDEFGFMFAP-NVESLHKTLEAAVSE  448 (493)
Q Consensus       391 ~~eg~~~~~~EAm~~G~PvI~s~~~---~~~~e~v~~~~~G~~~~~-d~~~l~~~i~~ll~~  448 (493)
                        +| |+-.-||...|+|.|++.-|   +.. +..  -+.|.++.. |+.+..+...+.+.+
T Consensus       259 --~g-gTMarEaAlLGtpaIs~~pGkll~vd-k~l--ie~G~~~~s~~~~~~~~~a~~~l~~  314 (346)
T COG1817         259 --AG-GTMAREAALLGTPAISCYPGKLLAVD-KYL--IEKGLLYHSTDEIAIVEYAVRNLKY  314 (346)
T ss_pred             --CC-chHHHHHHHhCCceEEecCCcccccc-HHH--HhcCceeecCCHHHHHHHHHHHhhc
Confidence              33 67789999999999999743   122 222  246888887 888777777777666

>PRK02797 4-alpha-L-fucosyltransferase; Provisional

Probab=98.48  E-value=7.5e-05  Score=68.25  Aligned_cols=210  Identities=13%  Similarity=0.144  Sum_probs=124.4

Q ss_pred             HhhccCCeEEEcChhHHHH-HHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCCCCCCcEEEEEeccc-ccccC
Q 039338          248 RFFNKYAHHVAISDSCGEM-LRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVAGRL-VKDKG  325 (493)
Q Consensus       248 ~~~~~~d~ii~~S~~~~~~-~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Gr~-~~~Kg  325 (493)
                      ...++..+|++ +...... -++.++++.+ ....|.-.++.. ......         -.+.++++| -+|+- ++..+
T Consensus        94 ~aq~rvg~v~a-trGD~~~~a~~~~~v~~~-llyfpt~m~~~l-~~~~~~---------~~~~~~~tI-lvGNSgd~SN~  160 (322)
T PRK02797         94 LAQKRVGHVFA-TRGDLSYFAQRHPKVPGS-LLYFPTRMDPSL-NTMAND---------RQRAGKMTI-LVGNSGDRSNR  160 (322)
T ss_pred             HHHhhcCeEEE-ecchHHHHHHhcCCCCcc-EEecCCcchhhh-cccccc---------ccCCCceEE-EEeCCCCCccc
Confidence            34578889999 4444444 5565666543 323332222211 111100         012334666 45554 56677


Q ss_pred             hHHHHHHHHHHHhhCCCeEEEEE-eCC-CcHHHHhhh--------c-CcEE-EecCCCHHHHHHHHHHcCEEEeCCCCCC
Q 039338          326 HPLLHEAFSKLMVKYPDVYLIVA-GSG-PWEQRYKDF--------G-HQVL-VMGSMSPAELRAFYNAIDIFVNPTLRPQ  393 (493)
Q Consensus       326 ~~~ll~a~~~l~~~~~~~~l~i~-G~g-~~~~~~~~l--------~-~~V~-~~g~~~~~~~~~~~~~adv~v~ps~~~e  393 (493)
                      +..+++++.+...  .++++++- |-+ ..+++.++.        + +++. +..+++-+|..++++.||+.++.-.+.+
T Consensus       161 Hie~L~~l~~~~~--~~v~ii~PlsYp~gn~~Yi~~V~~~~~~lF~~~~~~~L~e~l~f~eYl~lL~~~Dl~~f~~~RQQ  238 (322)
T PRK02797        161 HIEALRALHQQFG--DNVKIIVPMGYPANNQAYIEEVRQAGLALFGAENFQILTEKLPFDDYLALLRQCDLGYFIFARQQ  238 (322)
T ss_pred             HHHHHHHHHHHhC--CCeEEEEECCcCCCCHHHHHHHHHHHHHhcCcccEEehhhhCCHHHHHHHHHhCCEEEEeechhh
Confidence            8777787776644  57887763 432 123333321        2 4655 4567899999999999999999877778


Q ss_pred             CCChHHHHHHHcCCcEEecCCCCCccceeeeCcceEEECC---CHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHhcCH
Q 039338          394 GLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAP---NVESLHKTLEAAVSEGPMRLAQRGEACRQYAASMFTA  470 (493)
Q Consensus       394 g~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~~---d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~  470 (493)
                      |+|+ ++=.+.+|+||+.++....-.++. +.+.-++++.   |...+.++=           +++....++.+.  |+.
T Consensus       239 giGn-l~lLi~~G~~v~l~r~n~fwqdl~-e~gv~Vlf~~d~L~~~~v~e~~-----------rql~~~dk~~I~--Ff~  303 (322)
T PRK02797        239 GIGT-LCLLIQLGKPVVLSRDNPFWQDLT-EQGLPVLFTGDDLDEDIVREAQ-----------RQLASVDKNIIA--FFS  303 (322)
T ss_pred             HHhH-HHHHHHCCCcEEEecCCchHHHHH-hCCCeEEecCCcccHHHHHHHH-----------HHHHhhCcceee--ecC
Confidence            9985 555999999999886544442443 3334444443   333333322           223333334443  999


Q ss_pred             HHHHHHHHHHHHHHhhc
Q 039338          471 NKMALAYERLFLCIKNE  487 (493)
Q Consensus       471 ~~~~~~~~~~~~~i~~~  487 (493)
                      +..++.|.+++.....+
T Consensus       304 pn~~~~W~~~l~~~~g~  320 (322)
T PRK02797        304 PNYLQGWRNALAIAAGE  320 (322)
T ss_pred             HhHHHHHHHHHHHhhCC
Confidence            99999999999877654

>PLN03007 UDP-glucosyltransferase family protein

Probab=98.48  E-value=0.00074  Score=68.37  Aligned_cols=140  Identities=14%  Similarity=0.099  Sum_probs=77.4

Q ss_pred             hhhhCCCCCCcEEEEEecccccccChHHHHHHHHHHHhhCCCeEEEEEeCCC--------cHHHH-hh-hcCcEEEecCC
Q 039338          301 RSRIGIPKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGP--------WEQRY-KD-FGHQVLVMGSM  370 (493)
Q Consensus       301 r~~~~i~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~--------~~~~~-~~-l~~~V~~~g~~  370 (493)
                      .+-+.-.++++.+++.+|+.... ..+.+.+.+..+.....++ ++.++...        ..+.+ ++ ...++.+.+++
T Consensus       276 ~~wLd~~~~~svvyvsfGS~~~~-~~~~~~~~~~~l~~~~~~f-lw~~~~~~~~~~~~~~lp~~~~~r~~~~g~~v~~w~  353 (482)
T PLN03007        276 LKWLDSKKPDSVIYLSFGSVASF-KNEQLFEIAAGLEGSGQNF-IWVVRKNENQGEKEEWLPEGFEERTKGKGLIIRGWA  353 (482)
T ss_pred             HHHHhcCCCCceEEEeecCCcCC-CHHHHHHHHHHHHHCCCCE-EEEEecCCcccchhhcCCHHHHHHhccCCEEEecCC
Confidence            34443334445777888987532 1233444444443322222 34444311        11111 11 23688999999


Q ss_pred             CHHHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCcc---ceeee-CcceEEE----------CC-CH
Q 039338          371 SPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKG---TIVVD-DEFGFMF----------AP-NV  435 (493)
Q Consensus       371 ~~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~---e~v~~-~~~G~~~----------~~-d~  435 (493)
                      |+.   ++++.+++.++-+ + .| -++++||+++|+|+|+....+-..   ..+.+ -+.|+-+          +. +.
T Consensus       354 PQ~---~iL~h~~v~~fvt-H-~G-~nS~~Eal~~GVP~v~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~~~~~~~~  427 (482)
T PLN03007        354 PQV---LILDHQATGGFVT-H-CG-WNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTGVSVGAKKLVKVKGDFISR  427 (482)
T ss_pred             CHH---HHhccCccceeee-c-Cc-chHHHHHHHcCCCeeeccchhhhhhhHHHHHHhhcceeEeccccccccccCcccH
Confidence            876   4666676633334 2 34 459999999999999986433110   11111 1233322          23 78


Q ss_pred             HHHHHHHHHHHHc
Q 039338          436 ESLHKTLEAAVSE  448 (493)
Q Consensus       436 ~~l~~~i~~ll~~  448 (493)
                      +++.+++++++.+
T Consensus       428 ~~l~~av~~~m~~  440 (482)
T PLN03007        428 EKVEKAVREVIVG  440 (482)
T ss_pred             HHHHHHHHHHhcC
Confidence            9999999999987

>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2

Probab=98.47  E-value=1e-07  Score=87.11  Aligned_cols=45  Identities=24%  Similarity=0.378  Sum_probs=37.3

Q ss_pred             EEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCC
Q 039338           85 KIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDN  129 (493)
Q Consensus        85 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~  129 (493)
                      ||++|+.+++|....||.+.++..|.++|+++||+|.|+++....
T Consensus         1 kIl~vt~E~~P~~k~GGLgdv~~~L~kaL~~~G~~V~Vi~P~y~~   45 (245)
T PF08323_consen    1 KILMVTSEYAPFAKVGGLGDVVGSLPKALAKQGHDVRVIMPKYGF   45 (245)
T ss_dssp             EEEEE-S-BTTTB-SSHHHHHHHHHHHHHHHTT-EEEEEEE-THH
T ss_pred             CEEEEEcccCcccccCcHhHHHHHHHHHHHhcCCeEEEEEccchh
Confidence            799999999887899999999999999999999999999997744

4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A ....

>PLN00414 glycosyltransferase family protein

Probab=98.44  E-value=0.0015  Score=65.16  Aligned_cols=210  Identities=12%  Similarity=0.040  Sum_probs=113.6

Q ss_pred             HhhccCCeEEEcChhHHH-HHHHHhCCC-CCcEEEecCCccCCCccCCcccchhhhhhhCCCCCCcEEEEEecccccccC
Q 039338          248 RFFNKYAHHVAISDSCGE-MLRDVYQIP-SERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVAGRLVKDKG  325 (493)
Q Consensus       248 ~~~~~~d~ii~~S~~~~~-~~~~~~~~~-~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Gr~~~~Kg  325 (493)
                      ..+.+++.+++.|-...+ .+.+.+.-. ..++..|.+-+....-..........-+-+.-.+.+..+.+.+|+.... .
T Consensus       188 ~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~v~~VGPl~~~~~~~~~~~~~~~~~~WLD~q~~~sVvyvsfGS~~~~-~  266 (446)
T PLN00414        188 KGLKNCDVVSIRTCVELEGNLCDFIERQCQRKVLLTGPMLPEPQNKSGKPLEDRWNHWLNGFEPGSVVFCAFGTQFFF-E  266 (446)
T ss_pred             HhhccCCEEEEechHHHHHHHHHHHHHhcCCCeEEEcccCCCcccccCcccHHHHHHHHhcCCCCceEEEeecccccC-C
Confidence            345678999998865544 222222100 1245555443321100000011123444555455556888899987643 2


Q ss_pred             hHHHHHHHHHHHhhCCCeEEEEE---eCCC----cH-HHHhhh-cCcEEEecCCCHHHHHHHHHHcCEEEeCCCCCCCCC
Q 039338          326 HPLLHEAFSKLMVKYPDVYLIVA---GSGP----WE-QRYKDF-GHQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLD  396 (493)
Q Consensus       326 ~~~ll~a~~~l~~~~~~~~l~i~---G~g~----~~-~~~~~l-~~~V~~~g~~~~~~~~~~~~~adv~v~ps~~~eg~~  396 (493)
                      .+.+.+...-|...+.++-.++.   |.+.    .. ...++. +....+.|++|+.++... .+.+.+|  + + .| -
T Consensus       267 ~~q~~e~a~gL~~s~~~Flwvvr~~~~~~~~~~~lp~~f~~r~~~~g~vv~~w~PQ~~vL~h-~~v~~fv--t-H-~G-~  340 (446)
T PLN00414        267 KDQFQEFCLGMELTGLPFLIAVMPPKGSSTVQEALPEGFEERVKGRGIVWEGWVEQPLILSH-PSVGCFV--N-H-CG-F  340 (446)
T ss_pred             HHHHHHHHHHHHHcCCCeEEEEecCCCcccchhhCChhHHHHhcCCCeEEeccCCHHHHhcC-CccceEE--e-c-Cc-h
Confidence            34556666655554444433332   2111    11 111122 255677799998865433 3335566  3 2 34 4


Q ss_pred             hHHHHHHHcCCcEEecCCCCCc---ccee-eeCcceEEEC-----C-CHHHHHHHHHHHHHcCcHHHHHHHHHHHHHH
Q 039338          397 LTLMEAMMSGKPVMASRFPSIK---GTIV-VDDEFGFMFA-----P-NVESLHKTLEAAVSEGPMRLAQRGEACRQYA  464 (493)
Q Consensus       397 ~~~~EAm~~G~PvI~s~~~~~~---~e~v-~~~~~G~~~~-----~-d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~  464 (493)
                      ++++||+++|+|+|+....+-.   ...+ +.-+.|+.+.     . +.+++.+++++++.++.+..+++.+++++.-
T Consensus       341 nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~i~~~v~~~m~~~~e~g~~~r~~a~~~~  418 (446)
T PLN00414        341 GSMWESLVSDCQIVFIPQLADQVLITRLLTEELEVSVKVQREDSGWFSKESLRDTVKSVMDKDSEIGNLVKRNHKKLK  418 (446)
T ss_pred             hHHHHHHHcCCCEEecCcccchHHHHHHHHHHhCeEEEeccccCCccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHH
Confidence            6999999999999998643211   0223 2346676663     2 7899999999999873345555666665543

>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long)

Probab=98.44  E-value=6.4e-05  Score=69.66  Aligned_cols=206  Identities=15%  Similarity=0.126  Sum_probs=123.0

Q ss_pred             hccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCCCCCCcEEEEEeccc-ccccChHH
Q 039338          250 FNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVAGRL-VKDKGHPL  328 (493)
Q Consensus       250 ~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Gr~-~~~Kg~~~  328 (493)
                      .++..+|++ +......+++.|+-.+..+..-|.-+|...-.....          -..++++.| .+|+- ++..++-.
T Consensus       135 q~rvg~V~a-t~GDl~~~~q~~~~~~~~~lyfPt~m~~~~~~~~~~----------~~~~~~ltI-LvGNSgd~sNnHie  202 (360)
T PF07429_consen  135 QKRVGHVFA-TRGDLAYFQQRYPRVPASLLYFPTRMDPALTLSEKN----------KKNKGKLTI-LVGNSGDPSNNHIE  202 (360)
T ss_pred             HhhcCeEEE-EcchHHHHHHHcCCCCceEEEcCCCCchhhhccccc----------cCCCCceEE-EEcCCCCCCccHHH
Confidence            456677766 567777888877533333444444444332111111          012334666 45554 55667767


Q ss_pred             HHHHHHHHHhhCCCeEEEE-EeCCC-cHHHHhhh--------c-CcEEE-ecCCCHHHHHHHHHHcCEEEeCCCCCCCCC
Q 039338          329 LHEAFSKLMVKYPDVYLIV-AGSGP-WEQRYKDF--------G-HQVLV-MGSMSPAELRAFYNAIDIFVNPTLRPQGLD  396 (493)
Q Consensus       329 ll~a~~~l~~~~~~~~l~i-~G~g~-~~~~~~~l--------~-~~V~~-~g~~~~~~~~~~~~~adv~v~ps~~~eg~~  396 (493)
                      +++++++..  +.++++++ .|-|. .+++.+++        + +++.. ..+++-+|..++++.||+.++...+.+|.|
T Consensus       203 aL~~L~~~~--~~~~kIivPLsYg~~n~~Yi~~V~~~~~~lF~~~~~~iL~e~mpf~eYl~lL~~cDl~if~~~RQQgiG  280 (360)
T PF07429_consen  203 ALEALKQQF--GDDVKIIVPLSYGANNQAYIQQVIQAGKELFGAENFQILTEFMPFDEYLALLSRCDLGIFNHNRQQGIG  280 (360)
T ss_pred             HHHHHHHhc--CCCeEEEEECCCCCchHHHHHHHHHHHHHhcCccceeEhhhhCCHHHHHHHHHhCCEEEEeechhhhHh
Confidence            777666543  34677766 34443 23333322        2 46765 579999999999999999999998889998


Q ss_pred             hHHHHHHHcCCcEEecCCCCCccceeeeCcceEEEC-C--CHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHhcCHHHH
Q 039338          397 LTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFA-P--NVESLHKTLEAAVSEGPMRLAQRGEACRQYAASMFTANKM  473 (493)
Q Consensus       397 ~~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~-~--d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~  473 (493)
                      + ++=.+.+|+||+.++....-.+ +.+.+.-+++. +  |...+.++=+++..-+.           +.+  .|.....
T Consensus       281 n-I~lLl~~G~~v~L~~~np~~~~-l~~~~ipVlf~~d~L~~~~v~ea~rql~~~dk-----------~~i--aFf~pny  345 (360)
T PF07429_consen  281 N-ICLLLQLGKKVFLSRDNPFWQD-LKEQGIPVLFYGDELDEALVREAQRQLANVDK-----------QQI--AFFAPNY  345 (360)
T ss_pred             H-HHHHHHcCCeEEEecCChHHHH-HHhCCCeEEeccccCCHHHHHHHHHHHhhCcc-----------cce--eeeCCch
Confidence            5 5559999999999976665533 34444444444 2  56666665555543311           111  1566666


Q ss_pred             HHHHHHHHHHH
Q 039338          474 ALAYERLFLCI  484 (493)
Q Consensus       474 ~~~~~~~~~~i  484 (493)
                      .+.|.+.+...
T Consensus       346 ~~~w~~~l~~~  356 (360)
T PF07429_consen  346 LQGWRQALRLA  356 (360)
T ss_pred             HHHHHHHHHHH
Confidence            67776666543

This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall

>PRK14089 ipid-A-disaccharide synthase; Provisional

Probab=98.40  E-value=2.2e-06  Score=81.87  Aligned_cols=130  Identities=13%  Similarity=0.083  Sum_probs=78.9

Q ss_pred             ccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCCCCCCcEEEEEeccccc--ccChHH
Q 039338          251 NKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVAGRLVK--DKGHPL  328 (493)
Q Consensus       251 ~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Gr~~~--~Kg~~~  328 (493)
                      +.+|++.++=++..+.+    |+   ++.++.|++-... ...       +..  ++++ +.+.++-|+-..  .+....
T Consensus       126 k~~d~vl~ifPFE~~~y----g~---~~~~VGhPl~d~~-~~~-------~~~--~~~~-~~I~llPGSR~~Ei~~llP~  187 (347)
T PRK14089        126 KYCDFLASILPFEVQFY----QS---KATYVGHPLLDEI-KEF-------KKD--LDKE-GTIAFMPGSRKSEIKRLMPI  187 (347)
T ss_pred             HHHhhhhccCCCCHHHh----CC---CCEEECCcHHHhh-hhh-------hhh--cCCC-CEEEEECCCCHHHHHHHHHH
Confidence            34566666656555554    43   4567777753321 110       111  2222 466667776432  345567


Q ss_pred             HHHHHHHHHhhCCCeEEEEEeCCCcHHHHhhh-c--CcEEEecCCCHHHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHc
Q 039338          329 LHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDF-G--HQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMS  405 (493)
Q Consensus       329 ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~l-~--~~V~~~g~~~~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~  405 (493)
                      +++++.++.++.  .++++.|.... +.+++. .  ..+.+.+     +..++|++||+++..|      |++.+|++.+
T Consensus       188 ~~~aa~~L~~~~--~~~~i~~a~~~-~~i~~~~~~~~~~~~~~-----~~~~~m~~aDlal~~S------GT~TLE~al~  253 (347)
T PRK14089        188 FKELAKKLEGKE--KILVVPSFFKG-KDLKEIYGDISEFEISY-----DTHKALLEAEFAFICS------GTATLEAALI  253 (347)
T ss_pred             HHHHHHHHhhcC--cEEEEeCCCcH-HHHHHHHhcCCCcEEec-----cHHHHHHhhhHHHhcC------cHHHHHHHHh
Confidence            779999988753  67788776433 333332 1  2344442     4568999999999755      5677799999


Q ss_pred             CCcEEec
Q 039338          406 GKPVMAS  412 (493)
Q Consensus       406 G~PvI~s  412 (493)
                      |+|.|..
T Consensus       254 g~P~Vv~  260 (347)
T PRK14089        254 GTPFVLA  260 (347)
T ss_pred             CCCEEEE
Confidence            9999885

>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein

Probab=98.36  E-value=0.0036  Score=62.57  Aligned_cols=189  Identities=15%  Similarity=0.074  Sum_probs=101.8

Q ss_pred             hccCCeEEEcChhHHH-HHHHHhCC-CCCcEEEecCCccCCCc-cCCcccchhhhhhhCCCCCCcEEEEEecccccccCh
Q 039338          250 FNKYAHHVAISDSCGE-MLRDVYQI-PSERVHVILNGINENEY-GVDLSLGQSFRSRIGIPKNASLVLGVAGRLVKDKGH  326 (493)
Q Consensus       250 ~~~~d~ii~~S~~~~~-~~~~~~~~-~~~~v~vi~ngvd~~~~-~~~~~~~~~~r~~~~i~~~~~~~i~~~Gr~~~~Kg~  326 (493)
                      ..+++.|++.|-...+ .+.+.+.- ...++..|.+-.-.... ...........+-+.-.+.+..+.+.+|+... -..
T Consensus       201 ~~~~~~vlvNTf~eLE~~~~~~l~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~-~~~  279 (451)
T PLN02410        201 KRTASSVIINTASCLESSSLSRLQQQLQIPVYPIGPLHLVASAPTSLLEENKSCIEWLNKQKKNSVIFVSLGSLAL-MEI  279 (451)
T ss_pred             cccCCEEEEeChHHhhHHHHHHHHhccCCCEEEecccccccCCCccccccchHHHHHHHhCCCCcEEEEEcccccc-CCH
Confidence            4678999998865544 22222211 11245555432211000 00001111122333333344488889998763 233


Q ss_pred             HHHHHHHHHHHhhCCCeEEEEEeCCC----------cHHHHhhhcCcEEEecCCCHHHHHHHHHHcCE--EEeCCCCCCC
Q 039338          327 PLLHEAFSKLMVKYPDVYLIVAGSGP----------WEQRYKDFGHQVLVMGSMSPAELRAFYNAIDI--FVNPTLRPQG  394 (493)
Q Consensus       327 ~~ll~a~~~l~~~~~~~~l~i~G~g~----------~~~~~~~l~~~V~~~g~~~~~~~~~~~~~adv--~v~ps~~~eg  394 (493)
                      +.+.+.+.-|...+..+ ++++..+.          .....++..++..+.+++|+.++   ++..++  +|  + + .|
T Consensus       280 ~q~~ela~gLe~s~~~F-lWv~r~~~~~~~~~~~~lp~~f~er~~~~g~v~~w~PQ~~i---L~h~~v~~fv--t-H-~G  351 (451)
T PLN02410        280 NEVMETASGLDSSNQQF-LWVIRPGSVRGSEWIESLPKEFSKIISGRGYIVKWAPQKEV---LSHPAVGGFW--S-H-CG  351 (451)
T ss_pred             HHHHHHHHHHHhcCCCe-EEEEccCcccccchhhcCChhHHHhccCCeEEEccCCHHHH---hCCCccCeee--e-c-Cc
Confidence            44444444444433332 33343221          11223334577888899998864   555445  55  3 2 34


Q ss_pred             CChHHHHHHHcCCcEEecCCCCCcc---ceeeeC-cceEEECC--CHHHHHHHHHHHHHc
Q 039338          395 LDLTLMEAMMSGKPVMASRFPSIKG---TIVVDD-EFGFMFAP--NVESLHKTLEAAVSE  448 (493)
Q Consensus       395 ~~~~~~EAm~~G~PvI~s~~~~~~~---e~v~~~-~~G~~~~~--d~~~l~~~i~~ll~~  448 (493)
                      + ++++||+++|+|+|+....+-..   ..+.+. +.|+-+..  +.+++++++++++.+
T Consensus       352 ~-nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~v~~av~~lm~~  410 (451)
T PLN02410        352 W-NSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVEGDLDRGAVERAVKRLMVE  410 (451)
T ss_pred             h-hHHHHHHHcCCCEEeccccccCHHHHHHHHHHhCeeEEeCCcccHHHHHHHHHHHHcC
Confidence            3 59999999999999986533110   223333 57777743  889999999999977

>KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism]

Probab=98.35  E-value=4.7e-06  Score=78.36  Aligned_cols=245  Identities=13%  Similarity=0.185  Sum_probs=149.8

Q ss_pred             HHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCccc-------chh--------hhhh
Q 039338          239 VMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSL-------GQS--------FRSR  303 (493)
Q Consensus       239 ~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~-------~~~--------~r~~  303 (493)
                      ...++..|+.....|+.+.++|+-.+-......  ..++=.+.|||.+...|..-.+-       +++        +...
T Consensus       239 IYHrYC~ERaa~h~AhVFTTVSeITa~EAeHlL--kRKPD~itPNGLNV~KFsA~HEFQNLHA~~KekIndFVRGHF~Gh  316 (692)
T KOG3742|consen  239 IYHRYCLERAAAHTAHVFTTVSEITALEAEHLL--KRKPDVITPNGLNVKKFSAVHEFQNLHAQKKEKINDFVRGHFHGH  316 (692)
T ss_pred             hHHHHHHHHHhhhhhhhhhhHHHHHHHHHHHHH--hcCCCeeCCCCcceeehhHHHHHHHHHHHHHHHHHHHhhhhcccc
Confidence            344555666667777778888876543332221  22334678999998887543211       111        1112


Q ss_pred             hCCCCCCcEEEEEecccc-cccChHHHHHHHHHHHhh----CCC---eEEEEEeC-----------C-------------
Q 039338          304 IGIPKNASLVLGVAGRLV-KDKGHPLLHEAFSKLMVK----YPD---VYLIVAGS-----------G-------------  351 (493)
Q Consensus       304 ~~i~~~~~~~i~~~Gr~~-~~Kg~~~ll~a~~~l~~~----~~~---~~l~i~G~-----------g-------------  351 (493)
                      +..+-++.+.|..+||.. ..||-|.+++++++|.-.    +.+   +.|.|.-.           |             
T Consensus       317 lDFdLdkTlyfFiAGRYEf~NKGaDmFiEsLaRLN~~Lk~~~s~~TVVaFlImPaktN~FnVesLkgqAv~kqL~dtv~~  396 (692)
T KOG3742|consen  317 LDFDLDKTLYFFIAGRYEFSNKGADMFIESLARLNYLLKVSGSPKTVVAFLIMPAKTNSFNVESLKGQAVRKQLWDTVNE  396 (692)
T ss_pred             ccccccceEEEEEeeeeeeccCchHHHHHHHHHhHHHHeecCCCceEEEEEEeecCCCccchhhhccHHHHHHHHHHHHH
Confidence            344556668888999987 589999999999998542    122   12222211           0             


Q ss_pred             ------------------CcH-HHH--------hh---------h-----------------------------cCc--E
Q 039338          352 ------------------PWE-QRY--------KD---------F-----------------------------GHQ--V  364 (493)
Q Consensus       352 ------------------~~~-~~~--------~~---------l-----------------------------~~~--V  364 (493)
                                        |.. +.+        ++         +                             .++  |
T Consensus       397 Vk~~~Gkrifd~~l~g~lPd~~ell~~~d~v~lKr~i~a~~r~slPPv~THNm~dDa~DpiL~~iRr~~LFN~~~DRVKv  476 (692)
T KOG3742|consen  397 VKEKVGKRIFDHCLRGELPDLDELLDKDDLVLLKRCIFALQRQSLPPVCTHNMIDDANDPILSSIRRIGLFNSPSDRVKV  476 (692)
T ss_pred             HHHHHHHHHHHHHhcccCCChHHhhChhHHHHHHHHHHHhccCCCCCceeccccccccchHHHHhHhhhcccCcccceEE
Confidence                              000 000        00         0                             033  3


Q ss_pred             EEecC-------CCHHHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCC---ccceeee-CcceEEEC-
Q 039338          365 LVMGS-------MSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSI---KGTIVVD-DEFGFMFA-  432 (493)
Q Consensus       365 ~~~g~-------~~~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~---~~e~v~~-~~~G~~~~-  432 (493)
                      +|.+.       +=.-+..++.+.|++.|+||. +|++|.+..|.--+|+|-|+|+..|.   .+|.+.+ ...|+.+- 
T Consensus       477 ifHPEFLss~sPllglDYeeFVRGCHLGVFPSY-YEPWGYTPAECTVMGiPSvtTNlSGFGcfMeehi~d~~ayGIYIvD  555 (692)
T KOG3742|consen  477 IFHPEFLSSTSPLLGLDYEEFVRGCHLGVFPSY-YEPWGYTPAECTVMGIPSVTTNLSGFGCFMEEHIEDPQAYGIYIVD  555 (692)
T ss_pred             EecHHHhccCCCCcCCCHHHHhccccccccccc-cCCCCCCchheEEeccccccccccchhhhHHHHhcCchhceEEEEe
Confidence            44331       112377889999999999996 49999999999999999999987654   3354544 34566542 


Q ss_pred             ------C-CHHHHHHHHHHHHHcCcHHHHHHHHHHH-HHHHHhcCHHHHHHHHHHHHHHHhhcc
Q 039338          433 ------P-NVESLHKTLEAAVSEGPMRLAQRGEACR-QYAASMFTANKMALAYERLFLCIKNET  488 (493)
Q Consensus       433 ------~-d~~~l~~~i~~ll~~~~~~~~~~~~~~~-~~~~~~fs~~~~~~~~~~~~~~i~~~~  488 (493)
                            . ++++|++-+.++...  .+++++.++.| ++...-.+|..+...|.+.=.-.+.+-
T Consensus       556 RRfks~deSv~qL~~~m~~F~~q--sRRQRIiqRNrtErLSdLLDWk~lG~~Y~~aR~laL~r~  617 (692)
T KOG3742|consen  556 RRFKSPDESVQQLASFMYEFCKQ--SRRQRIIQRNRTERLSDLLDWKYLGRYYRKARHLALSRA  617 (692)
T ss_pred             cccCChhhHHHHHHHHHHHHHHH--HHHHHHHHhcchhhHHHHHhHHHHhHHHHHHHHHHHHhh
Confidence                  1 567777777777765  34454444443 455566799998888877655555443

>PLN02210 UDP-glucosyl transferase

Probab=98.34  E-value=0.0035  Score=62.81  Aligned_cols=341  Identities=13%  Similarity=0.066  Sum_probs=162.5

Q ss_pred             ceEEEEEeccCCCCCCCCchHHHHHHHHHH--HHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEee--c-CC
Q 039338           83 TLKIAVFSRKWPISTTPGGMERHAHTLHVA--LARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFH--E-GE  157 (493)
Q Consensus        83 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~--L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~  157 (493)
                      +.+|+++..      ..-|.-.-+..|++.  |+++|+.|+++++....  .. ......      ....+.+.  . ..
T Consensus         8 ~~hvv~~P~------pa~GHi~P~l~La~~L~L~~~G~~VT~v~t~~~~--~~-~~~~~~------~~~~~~~~~~~~gl   72 (456)
T PLN02210          8 ETHVLMVTL------AFQGHINPMLKLAKHLSLSSKNLHFTLATTEQAR--DL-LSTVEK------PRRPVDLVFFSDGL   72 (456)
T ss_pred             CCEEEEeCC------cccccHHHHHHHHHHHHhhcCCcEEEEEeccchh--hh-hccccC------CCCceEEEECCCCC
Confidence            467888863      336778889999999  56999999999987543  11 111000      00111111  0 11


Q ss_pred             CCcc-----ccc-----cchHHHHHHhcCCCCcEEEeCcc---chhHHhhhccCcEEEEeccchhhhhhhhhhh------
Q 039338          158 ADKW-----RYS-----KGWEQFDEENQREPFDVVHSESV---ALPHWLARNVTNLAVSWHGIALESLQSGIFQ------  218 (493)
Q Consensus       158 ~~~~-----~~~-----~~~~~~~~~~~~~~~DiI~~~~~---~~~~~~~~~~p~~v~~~h~~~~~~~~~~~~~------  218 (493)
                      +...     .+.     .....+.+.+.+.+||.|+....   ........++|.+++.............+..      
T Consensus        73 p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~vI~D~~~~w~~~vA~~lgIP~~~f~~~sa~~~~~~~~~~~~~~~~~  152 (456)
T PLN02210         73 PKDDPRAPETLLKSLNKVGAKNLSKIIEEKRYSCIISSPFTPWVPAVAAAHNIPCAILWIQACGAYSVYYRYYMKTNSFP  152 (456)
T ss_pred             CCCcccCHHHHHHHHHHhhhHHHHHHHhcCCCcEEEECCcchhHHHHHHHhCCCEEEEecccHHHHHHHHhhhhccCCCC
Confidence            1100     011     11123455555667998877532   2333344567854443333322111111100      


Q ss_pred             hh------hcCCCCc--cchHhHhHHH----HHHHHHHHHH-HhhccCCeEEEcChhHHH-HHHHHhCCCCCcEEEecCC
Q 039338          219 DL------TRKPLEP--MSLAFNKSLQ----GVMLKVLNEI-RFFNKYAHHVAISDSCGE-MLRDVYQIPSERVHVILNG  284 (493)
Q Consensus       219 ~~------~~~~~~~--~~~~~~~~~~----~~~~~~~~~~-~~~~~~d~ii~~S~~~~~-~~~~~~~~~~~~v~vi~ng  284 (493)
                      ..      ...|..+  ........+.    ..+.....+. .....++.|++.|-...+ ...+.+. ...++..|.+-
T Consensus       153 ~~~~~~~~~~~Pgl~~~~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~-~~~~v~~VGPl  231 (456)
T PLN02210        153 DLEDLNQTVELPALPLLEVRDLPSFMLPSGGAHFNNLMAEFADCLRYVKWVLVNSFYELESEIIESMA-DLKPVIPIGPL  231 (456)
T ss_pred             cccccCCeeeCCCCCCCChhhCChhhhcCCchHHHHHHHHHHHhcccCCEEEEeCHHHHhHHHHHHHh-hcCCEEEEccc
Confidence            00      0011111  0001100000    0011111111 234578889988866554 2222221 11245555544


Q ss_pred             ccCCC--ccCCc----------ccchhhhhhhCCCCCCcEEEEEecccccccChHHHHHHHHHHHhhCCCeEEEE-EeCC
Q 039338          285 INENE--YGVDL----------SLGQSFRSRIGIPKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIV-AGSG  351 (493)
Q Consensus       285 vd~~~--~~~~~----------~~~~~~r~~~~i~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i-~G~g  351 (493)
                      +....  .....          .......+-+.-.++++.+++.+|+.... ..+.+-+.+.-+...  +.++++ ++..
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wld~~~~~svvyvsfGS~~~~-~~~~~~e~a~~l~~~--~~~flw~~~~~  308 (456)
T PLN02210        232 VSPFLLGDDEEETLDGKNLDMCKSDDCCMEWLDKQARSSVVYISFGSMLES-LENQVETIAKALKNR--GVPFLWVIRPK  308 (456)
T ss_pred             CchhhcCcccccccccccccccccchHHHHHHhCCCCCceEEEEecccccC-CHHHHHHHHHHHHhC--CCCEEEEEeCC
Confidence            32100  00000          01112223333333445777788987532 334444444444443  234333 4422


Q ss_pred             C---cHHHHhhh--cCcEEEecCCCHHHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCcc---ceee
Q 039338          352 P---WEQRYKDF--GHQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKG---TIVV  423 (493)
Q Consensus       352 ~---~~~~~~~l--~~~V~~~g~~~~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~---e~v~  423 (493)
                      .   ....+.+.  .++..+.+++|+.+   +++.+++..+-+ + .|+ ++++||+++|+|+|+-...+-..   ..+.
T Consensus       309 ~~~~~~~~~~~~~~~~~g~v~~w~PQ~~---iL~h~~vg~Fit-H-~G~-nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~  382 (456)
T PLN02210        309 EKAQNVQVLQEMVKEGQGVVLEWSPQEK---ILSHMAISCFVT-H-CGW-NSTIETVVAGVPVVAYPSWTDQPIDARLLV  382 (456)
T ss_pred             ccccchhhHHhhccCCCeEEEecCCHHH---HhcCcCcCeEEe-e-CCc-ccHHHHHHcCCCEEecccccccHHHHHHHH
Confidence            1   11222222  24556779998875   566676433334 2 344 49999999999999986533110   1333


Q ss_pred             e-CcceEEEC------C-CHHHHHHHHHHHHHc
Q 039338          424 D-DEFGFMFA------P-NVESLHKTLEAAVSE  448 (493)
Q Consensus       424 ~-~~~G~~~~------~-d~~~l~~~i~~ll~~  448 (493)
                      + -+.|+.+.      . +.+++.+++++++.+
T Consensus       383 ~~~g~G~~l~~~~~~~~~~~~~l~~av~~~m~~  415 (456)
T PLN02210        383 DVFGIGVRMRNDAVDGELKVEEVERCIEAVTEG  415 (456)
T ss_pred             HHhCeEEEEeccccCCcCCHHHHHHHHHHHhcC
Confidence            3 46777663      3 789999999999976

>PLN02670 transferase, transferring glycosyl groups

Probab=98.32  E-value=0.0045  Score=62.01  Aligned_cols=227  Identities=11%  Similarity=0.027  Sum_probs=121.5

Q ss_pred             HhhccCCeEEEcChhHHH-HHHHHhCCC-CCcEEEecCCccC-CCccCCcc-c---chhhhhhhCCCCCCcEEEEEeccc
Q 039338          248 RFFNKYAHHVAISDSCGE-MLRDVYQIP-SERVHVILNGINE-NEYGVDLS-L---GQSFRSRIGIPKNASLVLGVAGRL  320 (493)
Q Consensus       248 ~~~~~~d~ii~~S~~~~~-~~~~~~~~~-~~~v~vi~ngvd~-~~~~~~~~-~---~~~~r~~~~i~~~~~~~i~~~Gr~  320 (493)
                      ....+++.|++.|-...+ ...+.+.-. ..++.-|.+-+.. ..-..... .   ...+.+-+.-.+.+.++.+.+|+.
T Consensus       209 ~~~~~~~gvlvNTf~eLE~~~l~~l~~~~~~~v~~VGPl~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~  288 (472)
T PLN02670        209 FAIGGSDVVIIRSSPEFEPEWFDLLSDLYRKPIIPIGFLPPVIEDDEEDDTIDVKGWVRIKEWLDKQRVNSVVYVALGTE  288 (472)
T ss_pred             hhcccCCEEEEeCHHHHhHHHHHHHHHhhCCCeEEEecCCccccccccccccccchhHHHHHHHhcCCCCceEEEEeccc
Confidence            345678999998865544 222222100 1245555433211 00000000 0   023444444443344777888987


Q ss_pred             cc--ccChHHHHHHHHHHHhhCCCeEEEEEeCCCc--HH--------HHhhh-cCcEEEecCCCHHHHHHHHHHcCEEEe
Q 039338          321 VK--DKGHPLLHEAFSKLMVKYPDVYLIVAGSGPW--EQ--------RYKDF-GHQVLVMGSMSPAELRAFYNAIDIFVN  387 (493)
Q Consensus       321 ~~--~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~--~~--------~~~~l-~~~V~~~g~~~~~~~~~~~~~adv~v~  387 (493)
                      ..  ...+..+..++...   ...+ ++++.....  .+        ..++. +..+.+.+++|+.++   ++...+..+
T Consensus       289 ~~l~~~q~~ela~gl~~s---~~~F-lWv~r~~~~~~~~~~~~lp~~f~~~~~~rG~vv~~W~PQ~~I---L~H~~v~~F  361 (472)
T PLN02670        289 ASLRREEVTELALGLEKS---ETPF-FWVLRNEPGTTQNALEMLPDGFEERVKGRGMIHVGWVPQVKI---LSHESVGGF  361 (472)
T ss_pred             ccCCHHHHHHHHHHHHHC---CCCE-EEEEcCCcccccchhhcCChHHHHhccCCCeEEeCcCCHHHH---hcCccccee
Confidence            53  33344444554444   2222 333332110  11        11111 134778899998864   555555333


Q ss_pred             CCCCCCCCChHHHHHHHcCCcEEecCCCCCc---cceeeeCcceEEEC------C-CHHHHHHHHHHHHHcCcH--HHHH
Q 039338          388 PTLRPQGLDLTLMEAMMSGKPVMASRFPSIK---GTIVVDDEFGFMFA------P-NVESLHKTLEAAVSEGPM--RLAQ  455 (493)
Q Consensus       388 ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~---~e~v~~~~~G~~~~------~-d~~~l~~~i~~ll~~~~~--~~~~  455 (493)
                      -+ + .| -++++||+++|+|+|+....+-.   ...++.-+.|+.+.      . +.+++.+++.+++.+ ++  .+++
T Consensus       362 vt-H-cG-wnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~g~Gv~l~~~~~~~~~~~e~i~~av~~vm~~-~~g~~~r~  437 (472)
T PLN02670        362 LT-H-CG-WNSVVEGLGFGRVLILFPVLNEQGLNTRLLHGKKLGLEVPRDERDGSFTSDSVAESVRLAMVD-DAGEEIRD  437 (472)
T ss_pred             ee-c-CC-cchHHHHHHcCCCEEeCcchhccHHHHHHHHHcCeeEEeeccccCCcCcHHHHHHHHHHHhcC-cchHHHHH
Confidence            34 2 33 46999999999999998643311   02334456777764      2 689999999999977 42  3333


Q ss_pred             HHHHHHHHHHHhcCHHHHHHHHHHHHHHHh
Q 039338          456 RGEACRQYAASMFTANKMALAYERLFLCIK  485 (493)
Q Consensus       456 ~~~~~~~~~~~~fs~~~~~~~~~~~~~~i~  485 (493)
                      ..++.++.+.+.=..++.++.+++.+.+..
T Consensus       438 ~a~~l~~~~~~~~~~~~~~~~~~~~l~~~~  467 (472)
T PLN02670        438 KAKEMRNLFGDMDRNNRYVDELVHYLRENR  467 (472)
T ss_pred             HHHHHHHHHhCcchhHHHHHHHHHHHHHhc
Confidence            344444445555577788888888777655

>PLN02764 glycosyltransferase family protein

Probab=98.28  E-value=0.0059  Score=60.75  Aligned_cols=228  Identities=11%  Similarity=0.027  Sum_probs=120.9

Q ss_pred             hhccCCeEEEcChhHHH-HHHHHhCCC-CCcEEEecCCccCCCccCCcccchhhhhhhCCCCCCcEEEEEecccccccCh
Q 039338          249 FFNKYAHHVAISDSCGE-MLRDVYQIP-SERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVAGRLVKDKGH  326 (493)
Q Consensus       249 ~~~~~d~ii~~S~~~~~-~~~~~~~~~-~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Gr~~~~Kg~  326 (493)
                      .+..++.|++.|-+..+ .+.+.+.-. ..++..|.+-+....  .........-+-+.-.+.+..+.+.+|+... -..
T Consensus       196 ~~~~s~~vlvNTf~eLE~~~~~~~~~~~~~~v~~VGPL~~~~~--~~~~~~~~cl~WLD~q~~~sVvyvsfGS~~~-~~~  272 (453)
T PLN02764        196 SLMNSDVIAIRTAREIEGNFCDYIEKHCRKKVLLTGPVFPEPD--KTRELEERWVKWLSGYEPDSVVFCALGSQVI-LEK  272 (453)
T ss_pred             hhccCCEEEEeccHHhhHHHHHHHHhhcCCcEEEeccCccCcc--ccccchhHHHHHHhCCCCCceEEEeeccccc-CCH
Confidence            45678899988855443 223323100 135666654321110  0011123344555555555688889998753 233


Q ss_pred             HHHHHHHHHHHhhCCCeEEEEEe-CCCc--HH-----HHhhh-cCcEEEecCCCHHHHHHHHHHcCEEEeCCCCCCCCCh
Q 039338          327 PLLHEAFSKLMVKYPDVYLIVAG-SGPW--EQ-----RYKDF-GHQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDL  397 (493)
Q Consensus       327 ~~ll~a~~~l~~~~~~~~l~i~G-~g~~--~~-----~~~~l-~~~V~~~g~~~~~~~~~~~~~adv~v~ps~~~eg~~~  397 (493)
                      +.+.+....|...+.++..++-- .+..  ..     ...+. +..+.+.+++|+.++... .+++.+|  + + .| -+
T Consensus       273 ~q~~ela~gL~~s~~pflwv~r~~~~~~~~~~~lp~~f~~r~~grG~v~~~W~PQ~~vL~h-~~v~~Fv--t-H-~G-~n  346 (453)
T PLN02764        273 DQFQELCLGMELTGSPFLVAVKPPRGSSTIQEALPEGFEERVKGRGVVWGGWVQQPLILSH-PSVGCFV--S-H-CG-FG  346 (453)
T ss_pred             HHHHHHHHHHHhCCCCeEEEEeCCCCCcchhhhCCcchHhhhccCCcEEeCCCCHHHHhcC-cccCeEE--e-c-CC-ch
Confidence            55556666655554455444431 1110  11     11111 256778899998875444 3345566  3 2 33 46


Q ss_pred             HHHHHHHcCCcEEecCCCCCcc---ceee-eCcceEEEC-----C-CHHHHHHHHHHHHHcCcHHHHHHHHHHHHH---H
Q 039338          398 TLMEAMMSGKPVMASRFPSIKG---TIVV-DDEFGFMFA-----P-NVESLHKTLEAAVSEGPMRLAQRGEACRQY---A  464 (493)
Q Consensus       398 ~~~EAm~~G~PvI~s~~~~~~~---e~v~-~~~~G~~~~-----~-d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~---~  464 (493)
                      +++||+.+|+|+|+....+-..   ..+. .-+.|+.+.     . +.+++.+++++++.+..+..+++.+++++.   +
T Consensus       347 S~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~~g~gv~~~~~~~~~~~~e~i~~av~~vm~~~~~~g~~~r~~a~~~~~~~  426 (453)
T PLN02764        347 SMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSVEVAREETGWFSKESLRDAINSVMKRDSEIGNLVKKNHTKWRETL  426 (453)
T ss_pred             HHHHHHHcCCCEEeCCcccchHHHHHHHHHHhceEEEeccccCCccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHH
Confidence            9999999999999987533110   1232 235565542     3 789999999999987324444444444433   3


Q ss_pred             HHhcCHHHHHHHHHHHHHHHh
Q 039338          465 ASMFTANKMALAYERLFLCIK  485 (493)
Q Consensus       465 ~~~fs~~~~~~~~~~~~~~i~  485 (493)
                      .+-=|-.+..+++.+.+.+..
T Consensus       427 ~~~GSS~~~l~~lv~~~~~~~  447 (453)
T PLN02764        427 ASPGLLTGYVDNFIESLQDLV  447 (453)
T ss_pred             HhcCCHHHHHHHHHHHHHHhc
Confidence            322233444444444444443

>PLN02562 UDP-glycosyltransferase

Probab=98.20  E-value=0.0078  Score=60.28  Aligned_cols=128  Identities=15%  Similarity=0.073  Sum_probs=77.7

Q ss_pred             cEEEEEecccc---cccChHHHHHHHHHHHhhCCCeEEEEEeCC---CcH-HHHhhhcCcEEEecCCCHHHHHHHHHHcC
Q 039338          311 SLVLGVAGRLV---KDKGHPLLHEAFSKLMVKYPDVYLIVAGSG---PWE-QRYKDFGHQVLVMGSMSPAELRAFYNAID  383 (493)
Q Consensus       311 ~~~i~~~Gr~~---~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g---~~~-~~~~~l~~~V~~~g~~~~~~~~~~~~~ad  383 (493)
                      ..+++.+|+..   +.+.+..+..++...   +..+ ++++..+   ... ...+...+++.+.+++|+.++   ++..+
T Consensus       274 svvyvsfGS~~~~~~~~~~~~l~~~l~~~---g~~f-iW~~~~~~~~~l~~~~~~~~~~~~~v~~w~PQ~~i---L~h~~  346 (448)
T PLN02562        274 SVIYISFGSWVSPIGESNVRTLALALEAS---GRPF-IWVLNPVWREGLPPGYVERVSKQGKVVSWAPQLEV---LKHQA  346 (448)
T ss_pred             ceEEEEecccccCCCHHHHHHHHHHHHHC---CCCE-EEEEcCCchhhCCHHHHHHhccCEEEEecCCHHHH---hCCCc
Confidence            36777888864   233444555555544   2222 3334321   111 122334578899999988865   44555


Q ss_pred             EEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCcc---ceeee-CcceEEECC-CHHHHHHHHHHHHHc
Q 039338          384 IFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKG---TIVVD-DEFGFMFAP-NVESLHKTLEAAVSE  448 (493)
Q Consensus       384 v~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~---e~v~~-~~~G~~~~~-d~~~l~~~i~~ll~~  448 (493)
                      +.++-+ + .| -++++||+.+|+|+|+....+-..   ..+.+ -+.|+-+.. +.+++.+++++++.+
T Consensus       347 v~~fvt-H-~G-~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~l~~~v~~~l~~  413 (448)
T PLN02562        347 VGCYLT-H-CG-WNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVRISGFGQKEVEEGLRKVMED  413 (448)
T ss_pred             cceEEe-c-Cc-chhHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceeEeCCCCHHHHHHHHHHHhCC
Confidence            533334 2 34 459999999999999986433110   22333 356777766 889999999999976

>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein

Probab=98.17  E-value=0.011  Score=59.55  Aligned_cols=141  Identities=13%  Similarity=0.178  Sum_probs=76.4

Q ss_pred             hhhhhCCCCCCcEEEEEecccccccChHHHHHHHHHHHhhCCCeEEEEEeCCCc--------HHHH-hhh-cCcEEEecC
Q 039338          300 FRSRIGIPKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPW--------EQRY-KDF-GHQVLVMGS  369 (493)
Q Consensus       300 ~r~~~~i~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~--------~~~~-~~l-~~~V~~~g~  369 (493)
                      ..+.+.-.+.++.+.+.+|++.... .+.+.+.+.-|...+..+ +++++....        .+.+ +.. +.++.+.++
T Consensus       273 ~~~WLd~~~~~svVyvsfGS~~~~~-~~~~~ela~gL~~~~~~f-lw~~~~~~~~~~~~~~lp~~~~~r~~~~g~~v~~w  350 (477)
T PLN02863        273 VMTWLDTCEDHKVVYVCFGSQVVLT-KEQMEALASGLEKSGVHF-IWCVKEPVNEESDYSNIPSGFEDRVAGRGLVIRGW  350 (477)
T ss_pred             HHHHHhcCCCCceEEEEeeceecCC-HHHHHHHHHHHHhCCCcE-EEEECCCcccccchhhCCHHHHHHhccCCEEecCC
Confidence            3344444444457777888875321 133333333443332222 334442111        0111 111 256888899


Q ss_pred             CCHHHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCcc---ceee-eCcceEEEC-----C-CHHHHH
Q 039338          370 MSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKG---TIVV-DDEFGFMFA-----P-NVESLH  439 (493)
Q Consensus       370 ~~~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~---e~v~-~~~~G~~~~-----~-d~~~l~  439 (493)
                      +|+.++... .+.++||.   + .| -++++||+++|+|+|+-...+-..   ..+. .-+.|+.+.     . +.+++.
T Consensus       351 ~PQ~~vL~h-~~v~~fvt---H-~G-~nS~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~gvG~~~~~~~~~~~~~~~v~  424 (477)
T PLN02863        351 APQVAILSH-RAVGAFLT---H-CG-WNSVLEGLVAGVPMLAWPMAADQFVNASLLVDELKVAVRVCEGADTVPDSDELA  424 (477)
T ss_pred             CCHHHHhcC-CCcCeEEe---c-CC-chHHHHHHHcCCCEEeCCccccchhhHHHHHHhhceeEEeccCCCCCcCHHHHH
Confidence            987654332 23556663   2 34 459999999999999986433110   1222 235666662     2 678999


Q ss_pred             HHHHHHHHc
Q 039338          440 KTLEAAVSE  448 (493)
Q Consensus       440 ~~i~~ll~~  448 (493)
                      +++.+++.+
T Consensus       425 ~~v~~~m~~  433 (477)
T PLN02863        425 RVFMESVSE  433 (477)
T ss_pred             HHHHHHhhc
Confidence            999998843

>PLN02554 UDP-glycosyltransferase family protein

Probab=98.11  E-value=0.0076  Score=61.05  Aligned_cols=190  Identities=14%  Similarity=0.048  Sum_probs=100.6

Q ss_pred             HhhccCCeEEEcChhHHHH-HHHHhC-C--CCCcEEEecCCccCCCccCC--cccchhhhhhhCCCCCCcEEEEEecccc
Q 039338          248 RFFNKYAHHVAISDSCGEM-LRDVYQ-I--PSERVHVILNGINENEYGVD--LSLGQSFRSRIGIPKNASLVLGVAGRLV  321 (493)
Q Consensus       248 ~~~~~~d~ii~~S~~~~~~-~~~~~~-~--~~~~v~vi~ngvd~~~~~~~--~~~~~~~r~~~~i~~~~~~~i~~~Gr~~  321 (493)
                      ..+..++.+++.|-...+. ....+. .  ...++..|..-+........  .....++.+-+.-.+.+..+++.+|++.
T Consensus       206 ~~~~~~~gvlvNt~~eLe~~~~~~l~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~~~~~wLd~~~~~svvyvsfGS~~  285 (481)
T PLN02554        206 RRFREMKGILVNTVAELEPQALKFFSGSSGDLPPVYPVGPVLHLENSGDDSKDEKQSEILRWLDEQPPKSVVFLCFGSMG  285 (481)
T ss_pred             HhcccCCEEEEechHHHhHHHHHHHHhcccCCCCEEEeCCCccccccccccccccchHHHHHHhcCCCCcEEEEeccccc
Confidence            4467899999988654442 222221 0  11355555443211110000  1111234444433333346777888874


Q ss_pred             c--ccChHHHHHHHHHHHhhCCCeEEEE-EeCC----------C--------cHHHHhhhcCcEEEecCCCHHHHHHHHH
Q 039338          322 K--DKGHPLLHEAFSKLMVKYPDVYLIV-AGSG----------P--------WEQRYKDFGHQVLVMGSMSPAELRAFYN  380 (493)
Q Consensus       322 ~--~Kg~~~ll~a~~~l~~~~~~~~l~i-~G~g----------~--------~~~~~~~l~~~V~~~g~~~~~~~~~~~~  380 (493)
                      .  .+.+..++.++...   +  .++++ ++..          .        .....++..+++.+.+++|+.++... .
T Consensus       286 ~~~~~~~~~la~~l~~~---~--~~flW~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~r~~~~g~v~~W~PQ~~iL~H-~  359 (481)
T PLN02554        286 GFSEEQAREIAIALERS---G--HRFLWSLRRASPNIMKEPPGEFTNLEEILPEGFLDRTKDIGKVIGWAPQVAVLAK-P  359 (481)
T ss_pred             cCCHHHHHHHHHHHHHc---C--CCeEEEEcCCcccccccccccccchhhhCChHHHHHhccCceEEeeCCHHHHhCC-c
Confidence            3  33455555555544   2  23333 3210          0        01122224467888899998765432 4


Q ss_pred             HcCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCc----cceeeeCcceEEEC-------------C-CHHHHHHHH
Q 039338          381 AIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIK----GTIVVDDEFGFMFA-------------P-NVESLHKTL  442 (493)
Q Consensus       381 ~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~----~e~v~~~~~G~~~~-------------~-d~~~l~~~i  442 (493)
                      +++.||  + + .| -++++||+.+|+|+|+....+-.    ..+++.-+.|..++             . +.+++.++|
T Consensus       360 ~v~~Fv--t-H-~G-~nS~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v~~~g~Gv~l~~~~~~~~~~~~~~~~~~e~l~~av  434 (481)
T PLN02554        360 AIGGFV--T-H-CG-WNSILESLWFGVPMAAWPLYAEQKFNAFEMVEELGLAVEIRKYWRGDLLAGEMETVTAEEIERGI  434 (481)
T ss_pred             ccCccc--c-c-Cc-cchHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEeeccccccccccccCeEcHHHHHHHH
Confidence            455566  3 2 34 45999999999999998643311    01233335566552             3 789999999


Q ss_pred             HHHHHc
Q 039338          443 EAAVSE  448 (493)
Q Consensus       443 ~~ll~~  448 (493)
                      .+++.+
T Consensus       435 ~~vm~~  440 (481)
T PLN02554        435 RCLMEQ  440 (481)
T ss_pred             HHHhcC
Confidence            999963

>PLN02173 UDP-glucosyl transferase family protein

Probab=97.92  E-value=0.031  Score=55.82  Aligned_cols=202  Identities=14%  Similarity=0.038  Sum_probs=105.3

Q ss_pred             HhhccCCeEEEcChhHHH-HHHHHhCCCCCcEEEecCCccCC----CccCCc---------ccchhhhhhhCCCCCCcEE
Q 039338          248 RFFNKYAHHVAISDSCGE-MLRDVYQIPSERVHVILNGINEN----EYGVDL---------SLGQSFRSRIGIPKNASLV  313 (493)
Q Consensus       248 ~~~~~~d~ii~~S~~~~~-~~~~~~~~~~~~v~vi~ngvd~~----~~~~~~---------~~~~~~r~~~~i~~~~~~~  313 (493)
                      ..+.++|.|++.|-...+ ...+.+.- ..++..|.+-+...    ......         ...+...+-+.-.+.+..+
T Consensus       189 ~~~~~~~~vlvNTf~eLE~~~~~~~~~-~~~v~~VGPl~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~WLd~~~~~svv  267 (449)
T PLN02173        189 TNFDKADFVLVNSFHDLDLHENELLSK-VCPVLTIGPTVPSMYLDQQIKSDNDYDLNLFDLKEAALCTDWLDKRPQGSVV  267 (449)
T ss_pred             hhhccCCEEEEeCHHHhhHHHHHHHHh-cCCeeEEcccCchhhccccccccccccccccccccchHHHHHHhcCCCCceE
Confidence            446789999999865544 22222211 12455454432110    000000         0111223333333444477


Q ss_pred             EEEecccccccChHHHHHHHHHHHhhCCCeEEEEEeCCC---c-HHHHhhh-cCcEEEecCCCHHHHHHHHHHcCEEEeC
Q 039338          314 LGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGP---W-EQRYKDF-GHQVLVMGSMSPAELRAFYNAIDIFVNP  388 (493)
Q Consensus       314 i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~---~-~~~~~~l-~~~V~~~g~~~~~~~~~~~~~adv~v~p  388 (493)
                      .+.+|+... -..+.+.+.+.-| .. .++ ++++-.+.   . ....++. ++++.+.+++|+.+   +++..++..+-
T Consensus       268 yvsfGS~~~-~~~~~~~ela~gL-s~-~~f-lWvvr~~~~~~lp~~~~~~~~~~~~~i~~W~PQ~~---iL~H~~v~~Fv  340 (449)
T PLN02173        268 YIAFGSMAK-LSSEQMEEIASAI-SN-FSY-LWVVRASEESKLPPGFLETVDKDKSLVLKWSPQLQ---VLSNKAIGCFM  340 (449)
T ss_pred             EEEeccccc-CCHHHHHHHHHHh-cC-CCE-EEEEeccchhcccchHHHhhcCCceEEeCCCCHHH---HhCCCccceEE
Confidence            888898753 2334444444444 22 233 33332111   1 1223333 47889999999775   56666654443


Q ss_pred             CCCCCCCChHHHHHHHcCCcEEecCCCCCcc---ceeeeC-cceEEEC------C-CHHHHHHHHHHHHHcCcHHHHHHH
Q 039338          389 TLRPQGLDLTLMEAMMSGKPVMASRFPSIKG---TIVVDD-EFGFMFA------P-NVESLHKTLEAAVSEGPMRLAQRG  457 (493)
Q Consensus       389 s~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~---e~v~~~-~~G~~~~------~-d~~~l~~~i~~ll~~~~~~~~~~~  457 (493)
                      + + .| .++++||+++|+|+|+...-+-..   ..+++. +.|+-+.      . +.+++.+++.+++.+ .+ .+++.
T Consensus       341 t-H-cG-wnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~g~Gv~v~~~~~~~~~~~e~v~~av~~vm~~-~~-~~~~r  415 (449)
T PLN02173        341 T-H-CG-WNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVRVKAEKESGIAKREEIEFSIKEVMEG-EK-SKEMK  415 (449)
T ss_pred             e-c-Cc-cchHHHHHHcCCCEEecCchhcchHHHHHHHHHhCceEEEeecccCCcccHHHHHHHHHHHhcC-Ch-HHHHH
Confidence            4 2 33 469999999999999986432110   233332 4555552      1 679999999999976 32 23444


Q ss_pred             HHHHH
Q 039338          458 EACRQ  462 (493)
Q Consensus       458 ~~~~~  462 (493)
                      +++++
T Consensus       416 ~~a~~  420 (449)
T PLN02173        416 ENAGK  420 (449)
T ss_pred             HHHHH
Confidence            44443

>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II

Probab=97.83  E-value=0.0014  Score=63.22  Aligned_cols=108  Identities=13%  Similarity=0.113  Sum_probs=75.2

Q ss_pred             hhhhhhhCCCCCCcEEEEEecc-cccccCh--HHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhhhc----Cc-EEEecC
Q 039338          298 QSFRSRIGIPKNASLVLGVAGR-LVKDKGH--PLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDFG----HQ-VLVMGS  369 (493)
Q Consensus       298 ~~~r~~~~i~~~~~~~i~~~Gr-~~~~Kg~--~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~l~----~~-V~~~g~  369 (493)
                      ..+..+++++.+++++++..|. ..+.|.+  +...+.++.+.+.  +.++++.|...+++..+++.    .+ +.+.|.
T Consensus       162 ~~~~~~~~~~~~~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~~--~~~ivl~G~~~e~~~~~~i~~~~~~~~~~l~g~  239 (334)
T TIGR02195       162 AAALAKFGLDTERPIIAFCPGAEFGPAKRWPHEHYAELAKRLIDQ--GYQVVLFGSAKDHPAGNEIEALLPGELRNLAGE  239 (334)
T ss_pred             HHHHHHcCCCCCCCEEEEcCCCCCCccCCCCHHHHHHHHHHHHHC--CCEEEEEEChhhHHHHHHHHHhCCcccccCCCC
Confidence            3445666766566677777776 3466664  4777877777653  57889999876665555443    33 346788


Q ss_pred             CCHHHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcCCcEEecC
Q 039338          370 MSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASR  413 (493)
Q Consensus       370 ~~~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~  413 (493)
                      .+-.++..+++.||++|-.    ++-  .+==|.|.|+|+|+--
T Consensus       240 ~sL~el~ali~~a~l~I~~----DSG--p~HlAaA~~~P~i~lf  277 (334)
T TIGR02195       240 TSLDEAVDLIALAKAVVTN----DSG--LMHVAAALNRPLVALY  277 (334)
T ss_pred             CCHHHHHHHHHhCCEEEee----CCH--HHHHHHHcCCCEEEEE
Confidence            8889999999999999953    232  4444889999999863

This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.

>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=97.82  E-value=6.3e-07  Score=77.15  Aligned_cols=109  Identities=21%  Similarity=0.357  Sum_probs=68.2

Q ss_pred             eEE-EEEeCCCcHHHHhhh---cCcEEEecCCCHHHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCc
Q 039338          343 VYL-IVAGSGPWEQRYKDF---GHQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIK  418 (493)
Q Consensus       343 ~~l-~i~G~g~~~~~~~~l---~~~V~~~g~~~~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~  418 (493)
                      +++ +++|.....+...+.   ..+|.+.++.  +++.++|+.||++|.   +  +-+.|+.|++++|+|.|.-...+..
T Consensus        32 ~~viv~~G~~~~~~~~~~~~~~~~~v~~~~~~--~~m~~~m~~aDlvIs---~--aG~~Ti~E~l~~g~P~I~ip~~~~~  104 (167)
T PF04101_consen   32 IQVIVQTGKNNYEELKIKVENFNPNVKVFGFV--DNMAELMAAADLVIS---H--AGAGTIAEALALGKPAIVIPLPGAA  104 (167)
T ss_dssp             CCCCCCCTTCECHHHCCCHCCTTCCCEEECSS--SSHHHHHHHHSEEEE---C--S-CHHHHHHHHCT--EEEE--TTT-
T ss_pred             cEEEEEECCCcHHHHHHHHhccCCcEEEEech--hhHHHHHHHcCEEEe---C--CCccHHHHHHHcCCCeeccCCCCcc
Confidence            344 445655333322222   2689999998  479999999999995   2  3356999999999999887666521


Q ss_pred             c-------ceeeeCcceEEECC---CHHHHHHHHHHHHHcCcHHHHHHHHH
Q 039338          419 G-------TIVVDDEFGFMFAP---NVESLHKTLEAAVSEGPMRLAQRGEA  459 (493)
Q Consensus       419 ~-------e~v~~~~~G~~~~~---d~~~l~~~i~~ll~~~~~~~~~~~~~  459 (493)
                      +       ..+.+.+.|..+..   +++.|.++|.+++.+ +.....+.++
T Consensus       105 ~~~q~~na~~~~~~g~~~~~~~~~~~~~~L~~~i~~l~~~-~~~~~~~~~~  154 (167)
T PF04101_consen  105 DNHQEENAKELAKKGAAIMLDESELNPEELAEAIEELLSD-PEKLKEMAKA  154 (167)
T ss_dssp             T-CHHHHHHHHHHCCCCCCSECCC-SCCCHHHHHHCHCCC-HH-SHHHCCC
T ss_pred             hHHHHHHHHHHHHcCCccccCcccCCHHHHHHHHHHHHcC-cHHHHHHHHH
Confidence            0       12333444554443   578899999999888 6655555444

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.

>PLN00164 glucosyltransferase; Provisional

Probab=97.78  E-value=0.056  Score=54.70  Aligned_cols=96  Identities=10%  Similarity=0.070  Sum_probs=59.8

Q ss_pred             CcEEEecCCCHHHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCcc---cee-eeCcceEEEC-----
Q 039338          362 HQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKG---TIV-VDDEFGFMFA-----  432 (493)
Q Consensus       362 ~~V~~~g~~~~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~---e~v-~~~~~G~~~~-----  432 (493)
                      ..+.+.+++|+.+   +++..++..+-+ + .|+ ++++||+++|+|+|+-..-+-..   ..+ ..-+.|+.+.     
T Consensus       339 ~g~~v~~w~PQ~~---iL~h~~vg~fvt-H-~Gw-nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvG~~~~~~~~~  412 (480)
T PLN00164        339 RGLVWPTWAPQKE---ILAHAAVGGFVT-H-CGW-NSVLESLWHGVPMAPWPLYAEQHLNAFELVADMGVAVAMKVDRKR  412 (480)
T ss_pred             CCeEEeecCCHHH---HhcCcccCeEEe-e-ccc-chHHHHHHcCCCEEeCCccccchhHHHHHHHHhCeEEEecccccc
Confidence            4577779998775   456666533334 2 343 59999999999999986432110   122 2335676653     


Q ss_pred             --C-CHHHHHHHHHHHHHcCcHHHHHHHHHHHHH
Q 039338          433 --P-NVESLHKTLEAAVSEGPMRLAQRGEACRQY  463 (493)
Q Consensus       433 --~-d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~  463 (493)
                        . +.+++.++|.+++.+..++.+++++++++.
T Consensus       413 ~~~~~~e~l~~av~~vm~~~~~~~~~~r~~a~~~  446 (480)
T PLN00164        413 DNFVEAAELERAVRSLMGGGEEEGRKAREKAAEM  446 (480)
T ss_pred             CCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHH
Confidence              2 679999999999976221234444444443

>PLN02207 UDP-glycosyltransferase

Probab=97.70  E-value=0.0087  Score=59.95  Aligned_cols=189  Identities=12%  Similarity=0.070  Sum_probs=102.5

Q ss_pred             HhhccCCeEEEcChhHHHH-HHHHhCC-C-CCcEEEecCCccCCCccCCc----ccchhhhhhhCCCCCCcEEEEEeccc
Q 039338          248 RFFNKYAHHVAISDSCGEM-LRDVYQI-P-SERVHVILNGINENEYGVDL----SLGQSFRSRIGIPKNASLVLGVAGRL  320 (493)
Q Consensus       248 ~~~~~~d~ii~~S~~~~~~-~~~~~~~-~-~~~v~vi~ngvd~~~~~~~~----~~~~~~r~~~~i~~~~~~~i~~~Gr~  320 (493)
                      ..+.+++.+++.|....+. ..+.+.- + ..++..|..-..... ...+    ...+.+.+-+.-.+.+..+.+.+|+.
T Consensus       207 ~~~~~~~~vlvNtf~~LE~~~~~~~~~~~~~p~v~~VGPl~~~~~-~~~~~~~~~~~~~~~~WLd~~~~~sVVyvSfGS~  285 (468)
T PLN02207        207 ILFTKANGILVNSSFDIEPYSVNHFLDEQNYPSVYAVGPIFDLKA-QPHPEQDLARRDELMKWLDDQPEASVVFLCFGSM  285 (468)
T ss_pred             HhcccCCEEEEEchHHHhHHHHHHHHhccCCCcEEEecCCccccc-CCCCccccchhhHHHHHHhcCCCCcEEEEEeccC
Confidence            3467899999999887764 2332310 1 134555543321110 0000    01123444444444444777788987


Q ss_pred             cc--ccChHHHHHHHHHHHhhCCCeEEEEEeCCCc-------HHHHhhhcCcEEEecCCCHHHHHHHHHHcCEEEeCCCC
Q 039338          321 VK--DKGHPLLHEAFSKLMVKYPDVYLIVAGSGPW-------EQRYKDFGHQVLVMGSMSPAELRAFYNAIDIFVNPTLR  391 (493)
Q Consensus       321 ~~--~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~-------~~~~~~l~~~V~~~g~~~~~~~~~~~~~adv~v~ps~~  391 (493)
                      ..  .+....+..++....   ..+ ++.+.+...       ....++..+++.+.++.|+.++... .+...||  + +
T Consensus       286 ~~~~~~q~~ela~~l~~~~---~~f-lW~~r~~~~~~~~~lp~~f~er~~~~g~i~~W~PQ~~IL~H-~~vg~Fv--T-H  357 (468)
T PLN02207        286 GRLRGPLVKEIAHGLELCQ---YRF-LWSLRTEEVTNDDLLPEGFLDRVSGRGMICGWSPQVEILAH-KAVGGFV--S-H  357 (468)
T ss_pred             cCCCHHHHHHHHHHHHHCC---CcE-EEEEeCCCccccccCCHHHHhhcCCCeEEEEeCCHHHHhcc-cccceee--e-c
Confidence            52  233445555555442   222 334442111       1223334577888899998876544 3334455  3 2


Q ss_pred             CCCCChHHHHHHHcCCcEEecCCCCCcc---ce-eeeCcceEEE---------CC-CHHHHHHHHHHHHH
Q 039338          392 PQGLDLTLMEAMMSGKPVMASRFPSIKG---TI-VVDDEFGFMF---------AP-NVESLHKTLEAAVS  447 (493)
Q Consensus       392 ~eg~~~~~~EAm~~G~PvI~s~~~~~~~---e~-v~~~~~G~~~---------~~-d~~~l~~~i~~ll~  447 (493)
                       .|+ ++++||+.+|+|+|+-...+-..   .. +..-+.|+-+         .. +.+++.++|.+++.
T Consensus       358 -~Gw-nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~~~~~~~~~~~~~v~~e~i~~av~~vm~  425 (468)
T PLN02207        358 -CGW-NSIVESLWFGVPIVTWPMYAEQQLNAFLMVKELKLAVELKLDYRVHSDEIVNANEIETAIRCVMN  425 (468)
T ss_pred             -Ccc-ccHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEEecccccccCCcccHHHHHHHHHHHHh
Confidence             343 58999999999999986533110   12 2223455533         13 77899999999996

>PLN02992 coniferyl-alcohol glucosyltransferase

Probab=97.69  E-value=0.077  Score=53.45  Aligned_cols=188  Identities=12%  Similarity=-0.028  Sum_probs=100.9

Q ss_pred             HhhccCCeEEEcChhHHH-HHHHHhC----CC---CCcEEEecCCccCCCccCCcccchhhhhhhCCCCCCcEEEEEecc
Q 039338          248 RFFNKYAHHVAISDSCGE-MLRDVYQ----IP---SERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVAGR  319 (493)
Q Consensus       248 ~~~~~~d~ii~~S~~~~~-~~~~~~~----~~---~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Gr  319 (493)
                      ..+.++|.+++.|-...+ ...+.+.    ..   ..++.-|.+-+....  .. .......+-+.-.+.+..+++.+|+
T Consensus       196 ~~~~~a~gvlvNTf~eLE~~~l~~l~~~~~~~~~~~~~v~~VGPl~~~~~--~~-~~~~~c~~wLd~~~~~sVvyvsfGS  272 (481)
T PLN02992        196 LAYPKADGILVNTWEEMEPKSLKSLQDPKLLGRVARVPVYPIGPLCRPIQ--SS-KTDHPVLDWLNKQPNESVLYISFGS  272 (481)
T ss_pred             HhcccCCEEEEechHHHhHHHHHHHhhccccccccCCceEEecCccCCcC--CC-cchHHHHHHHHcCCCCceEEEeecc
Confidence            346789999999865544 2222221    00   123444443222110  11 1112233334333334477788898


Q ss_pred             ccc--ccChHHHHHHHHHHHhhCCCeEEEEEeC---C--------------Cc--H-----HHHhhh-cCcEEEecCCCH
Q 039338          320 LVK--DKGHPLLHEAFSKLMVKYPDVYLIVAGS---G--------------PW--E-----QRYKDF-GHQVLVMGSMSP  372 (493)
Q Consensus       320 ~~~--~Kg~~~ll~a~~~l~~~~~~~~l~i~G~---g--------------~~--~-----~~~~~l-~~~V~~~g~~~~  372 (493)
                      ...  .+....+..++....   ..+ ++++-.   +              ..  .     ...++. +.++.+.+++|+
T Consensus       273 ~~~l~~~q~~ela~gL~~s~---~~f-lW~~r~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~f~eR~~~rg~vv~~W~PQ  348 (481)
T PLN02992        273 GGSLSAKQLTELAWGLEMSQ---QRF-VWVVRPPVDGSACSAYFSANGGETRDNTPEYLPEGFVSRTHDRGFVVPSWAPQ  348 (481)
T ss_pred             cccCCHHHHHHHHHHHHHcC---CCE-EEEEeCCcccccccccccCcccccccchhhhCCHHHHHHhcCCCEEEeecCCH
Confidence            753  344555556665552   223 334411   0              00  0     111111 256889999998


Q ss_pred             HHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCcc---cee-eeCcceEEEC----C-CHHHHHHHHH
Q 039338          373 AELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKG---TIV-VDDEFGFMFA----P-NVESLHKTLE  443 (493)
Q Consensus       373 ~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~---e~v-~~~~~G~~~~----~-d~~~l~~~i~  443 (493)
                      .++   ++...+..+-+ + .| -++++||+.+|+|+|+....+-..   ..+ +.-+.|..++    . +.+++.+++.
T Consensus       349 ~~i---L~h~~vg~Fit-H-~G-~nS~~Eal~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~~~~~~~~l~~av~  422 (481)
T PLN02992        349 AEI---LAHQAVGGFLT-H-CG-WSSTLESVVGGVPMIAWPLFAEQNMNAALLSDELGIAVRSDDPKEVISRSKIEALVR  422 (481)
T ss_pred             HHH---hCCcccCeeEe-c-Cc-hhHHHHHHHcCCCEEecCccchhHHHHHHHHHHhCeeEEecCCCCcccHHHHHHHHH
Confidence            764   55555533323 2 33 469999999999999986533110   123 3445676663    2 7899999999


Q ss_pred             HHHHc
Q 039338          444 AAVSE  448 (493)
Q Consensus       444 ~ll~~  448 (493)
                      +++.+
T Consensus       423 ~vm~~  427 (481)
T PLN02992        423 KVMVE  427 (481)
T ss_pred             HHhcC
Confidence            99976

>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]

Probab=97.65  E-value=0.0063  Score=58.61  Aligned_cols=96  Identities=20%  Similarity=0.226  Sum_probs=71.1

Q ss_pred             CcEEEEEec-ccccccCh--HHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhhhc----CcEEEecCCCHHHHHHHHHHc
Q 039338          310 ASLVLGVAG-RLVKDKGH--PLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDFG----HQVLVMGSMSPAELRAFYNAI  382 (493)
Q Consensus       310 ~~~~i~~~G-r~~~~Kg~--~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~l~----~~V~~~g~~~~~~~~~~~~~a  382 (493)
                      ++.+++..| +-...|.+  +...+.+..+.+++  .+++++|+..+.+..+++.    ..+.+.|..+-.++..+++.|
T Consensus       175 ~~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~--~~Vvl~g~~~e~e~~~~i~~~~~~~~~l~~k~sL~e~~~li~~a  252 (334)
T COG0859         175 RPYIVINPGASRGSAKRWPLEHYAELAELLIAKG--YQVVLFGGPDEEERAEEIAKGLPNAVILAGKTSLEELAALIAGA  252 (334)
T ss_pred             CCeEEEeccccccccCCCCHHHHHHHHHHHHHCC--CEEEEecChHHHHHHHHHHHhcCCccccCCCCCHHHHHHHHhcC
Confidence            457777888 66567765  47778888888775  7889999875555655554    223389999999999999999


Q ss_pred             CEEEeCCCCCCCCChHHHHHHHcCCcEEecC
Q 039338          383 DIFVNPTLRPQGLDLTLMEAMMSGKPVMASR  413 (493)
Q Consensus       383 dv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~  413 (493)
                      |++|-+.    + | .+-=|.+.|+|+|+.-
T Consensus       253 ~l~I~~D----S-g-~~HlAaA~~~P~I~iy  277 (334)
T COG0859         253 DLVIGND----S-G-PMHLAAALGTPTIALY  277 (334)
T ss_pred             CEEEccC----C-h-HHHHHHHcCCCEEEEE
Confidence            9999543    2 2 3444889999999864

>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional

Probab=97.65  E-value=0.014  Score=55.96  Aligned_cols=95  Identities=15%  Similarity=0.086  Sum_probs=63.8

Q ss_pred             cEEEEEecccccccCh--HHHHHHHHHHHhhCCCeEEEEE-eCCCcHHHHhhhc---CcEEEecCCCHHHHHHHHHHcCE
Q 039338          311 SLVLGVAGRLVKDKGH--PLLHEAFSKLMVKYPDVYLIVA-GSGPWEQRYKDFG---HQVLVMGSMSPAELRAFYNAIDI  384 (493)
Q Consensus       311 ~~~i~~~Gr~~~~Kg~--~~ll~a~~~l~~~~~~~~l~i~-G~g~~~~~~~~l~---~~V~~~g~~~~~~~~~~~~~adv  384 (493)
                      +++++..|.-...|.+  +...+.+..+.++  +.++++. |...+.+..+++.   .++.+.|..+-.++..+++.||+
T Consensus       179 ~~i~~~~~~s~~~k~Wp~e~~a~li~~l~~~--~~~ivl~~G~~~e~~~~~~i~~~~~~~~l~g~~sL~elaali~~a~l  256 (322)
T PRK10964        179 PYLVFLHATTRDDKHWPEAHWRELIGLLAPS--GLRIKLPWGAEHEEQRAKRLAEGFPYVEVLPKLSLEQVARVLAGAKA  256 (322)
T ss_pred             CeEEEEeCCCcccccCCHHHHHHHHHHHHHC--CCeEEEeCCCHHHHHHHHHHHccCCcceecCCCCHHHHHHHHHhCCE
Confidence            3554445543445554  4677888887654  5677775 5433444444433   45778898888999999999999


Q ss_pred             EEeCCCCCCCCChHHHHHHHcCCcEEecC
Q 039338          385 FVNPTLRPQGLDLTLMEAMMSGKPVMASR  413 (493)
Q Consensus       385 ~v~ps~~~eg~~~~~~EAm~~G~PvI~s~  413 (493)
                      +|-.-    +-  .+-=|.++|+|+|+-=
T Consensus       257 ~I~nD----SG--p~HlA~A~g~p~valf  279 (322)
T PRK10964        257 VVSVD----TG--LSHLTAALDRPNITLY  279 (322)
T ss_pred             EEecC----Cc--HHHHHHHhCCCEEEEE
Confidence            99632    21  4555889999999864

>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional

Probab=97.65  E-value=0.01  Score=57.59  Aligned_cols=106  Identities=11%  Similarity=0.029  Sum_probs=70.6

Q ss_pred             hhhhhCCCCCCcEEEEEeccc-ccccCh--HHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhhhc----C-----cEEEe
Q 039338          300 FRSRIGIPKNASLVLGVAGRL-VKDKGH--PLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDFG----H-----QVLVM  367 (493)
Q Consensus       300 ~r~~~~i~~~~~~~i~~~Gr~-~~~Kg~--~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~l~----~-----~V~~~  367 (493)
                      +...+++..+++++++..|.- .+.|.+  +.+.+.++.+.+  .++++++.|...+++..+++.    .     .+.+.
T Consensus       170 ~~~~~~~~~~~~~i~i~pga~~~~~K~Wp~e~~a~l~~~l~~--~~~~vvl~Gg~~e~~~~~~i~~~~~~~~~~~~~~l~  247 (348)
T PRK10916        170 TCAAFSLSSERPIIGFCPGAEFGPAKRWPHYHYAELAQQLID--EGYQVVLFGSAKDHEAGNEILAALNTEQQAWCRNLA  247 (348)
T ss_pred             HHHHcCCCCCCCEEEEeCCCCCccccCCCHHHHHHHHHHHHH--CCCeEEEEeCHHhHHHHHHHHHhcccccccceeecc
Confidence            344445544555666677763 355654  466777777754  367888999766655544432    1     15677


Q ss_pred             cCCCHHHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcCCcEEecC
Q 039338          368 GSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASR  413 (493)
Q Consensus       368 g~~~~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~  413 (493)
                      |..+=.++..+++.||++|-.    ++-  .+==|.|.|+|+|+-=
T Consensus       248 g~~sL~el~ali~~a~l~I~n----DTG--p~HlAaA~g~P~valf  287 (348)
T PRK10916        248 GETQLEQAVILIAACKAIVTN----DSG--LMHVAAALNRPLVALY  287 (348)
T ss_pred             CCCCHHHHHHHHHhCCEEEec----CCh--HHHHHHHhCCCEEEEE
Confidence            888889999999999999953    232  4445889999999853

>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I

Probab=97.53  E-value=0.013  Score=56.13  Aligned_cols=129  Identities=17%  Similarity=0.061  Sum_probs=78.1

Q ss_pred             CCcEEEEEecccccccCh--HHHHHHHHHHHhhCCCeEEEEEeCCC-cHHHHhhhc---CcEEEecCCCHHHHHHHHHHc
Q 039338          309 NASLVLGVAGRLVKDKGH--PLLHEAFSKLMVKYPDVYLIVAGSGP-WEQRYKDFG---HQVLVMGSMSPAELRAFYNAI  382 (493)
Q Consensus       309 ~~~~~i~~~Gr~~~~Kg~--~~ll~a~~~l~~~~~~~~l~i~G~g~-~~~~~~~l~---~~V~~~g~~~~~~~~~~~~~a  382 (493)
                      +++++++..|.-.+.|.+  +.+.+.++.+.++  +.++++.|.++ +++..+++.   ++..+.|..+-.++..+++.|
T Consensus       178 ~~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~~--~~~~vl~~g~~~e~~~~~~i~~~~~~~~l~g~~sL~el~ali~~a  255 (319)
T TIGR02193       178 PAPYAVLLHATSRDDKTWPEERWRELARLLLAR--GLQIVLPWGNDAEKQRAERIAEALPGAVVLPKMSLAEVAALLAGA  255 (319)
T ss_pred             CCCEEEEEeCCCcccCCCCHHHHHHHHHHHHHC--CCeEEEeCCCHHHHHHHHHHHhhCCCCeecCCCCHHHHHHHHHcC
Confidence            345666677765566765  5777777777653  56777775444 333333332   445678988889999999999


Q ss_pred             CEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCccceeeeCcc-eE----EECC-CHHHHHHHHHHH
Q 039338          383 DIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEF-GF----MFAP-NVESLHKTLEAA  445 (493)
Q Consensus       383 dv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~-G~----~~~~-d~~~l~~~i~~l  445 (493)
                      |++|-.    ++.  .+==|.++|+|+|+-=.+..+...---+.+ ..    .... ++++..+++.++
T Consensus       256 ~l~I~~----DSg--p~HlAaa~g~P~i~lfg~t~p~~~~P~~~~~~~~~~~~~~~I~~~~V~~ai~~~  318 (319)
T TIGR02193       256 DAVVGV----DTG--LTHLAAALDKPTVTLYGATDPGRTGGYGKPNVALLGESGANPTPDEVLAALEEL  318 (319)
T ss_pred             CEEEeC----CCh--HHHHHHHcCCCEEEEECCCCHhhcccCCCCceEEccCccCCCCHHHHHHHHHhh
Confidence            999963    332  344477899999986322222110000111 11    1333 677777777665

This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.

>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]

Probab=97.50  E-value=0.044  Score=48.83  Aligned_cols=153  Identities=15%  Similarity=0.125  Sum_probs=80.2

Q ss_pred             ccCCeEEEcChhHHHHHHHHhCCCCCcEEEe---cCCccCCCccCCcccchhhhhhhCCCCCCcEEEEEecccccccCh-
Q 039338          251 NKYAHHVAISDSCGEMLRDVYQIPSERVHVI---LNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVAGRLVKDKGH-  326 (493)
Q Consensus       251 ~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi---~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Gr~~~~Kg~-  326 (493)
                      ...|.|++.-....+....    ...++.-|   +|.|...+...   . .+..+.++ |..++++-+++|.-.+.-.+ 
T Consensus       108 ~~fDlvivp~HD~~~~~s~----~~~Nilpi~Gs~h~Vt~~~lAa---~-~e~~~~~~-p~~rq~vAVlVGg~nk~f~~~  178 (329)
T COG3660         108 NHFDLVIVPYHDWREELSD----QGPNILPINGSPHNVTSQRLAA---L-REAFKHLL-PLPRQRVAVLVGGNNKAFVFQ  178 (329)
T ss_pred             ccceEEeccchhhhhhhhc----cCCceeeccCCCCcccHHHhhh---h-HHHHHhhC-CCCCceEEEEecCCCCCCccC
Confidence            3467777776666554322    22344333   22232222211   1 22333443 55566787888876554333 


Q ss_pred             -H---HHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhh-----hc-CcEEEecCC--CHHHHHHHHHHcCEEEeCCCCCCC
Q 039338          327 -P---LLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKD-----FG-HQVLVMGSM--SPAELRAFYNAIDIFVNPTLRPQG  394 (493)
Q Consensus       327 -~---~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~-----l~-~~V~~~g~~--~~~~~~~~~~~adv~v~ps~~~eg  394 (493)
                       +   .+..++.+..++ ....+++.-+....+..+.     +. ..+.+...-  ...-+.+++++||.++.+.   ++
T Consensus       179 ~d~a~q~~~~l~k~l~~-~g~~~lisfSRRTp~~~~s~l~~~l~s~~~i~w~~~d~g~NPY~~~La~Adyii~Ta---DS  254 (329)
T COG3660         179 EDKAHQFASLLVKILEN-QGGSFLISFSRRTPDTVKSILKNNLNSSPGIVWNNEDTGYNPYIDMLAAADYIISTA---DS  254 (329)
T ss_pred             HHHHHHHHHHHHHHHHh-CCceEEEEeecCCcHHHHHHHHhccccCceeEeCCCCCCCCchHHHHhhcceEEEec---ch
Confidence             2   233333333332 2455665544332222222     22 233444333  3356889999999999754   33


Q ss_pred             CChHHHHHHHcCCcEEecCCCCC
Q 039338          395 LDLTLMEAMMSGKPVMASRFPSI  417 (493)
Q Consensus       395 ~~~~~~EAm~~G~PvI~s~~~~~  417 (493)
                       =+-..||.+.|+||-+...++.
T Consensus       255 -inM~sEAasTgkPv~~~~~~~~  276 (329)
T COG3660         255 -INMCSEAASTGKPVFILEPPNF  276 (329)
T ss_pred             -hhhhHHHhccCCCeEEEecCCc
Confidence             2367899999999988764443

>PF11440 AGT: DNA alpha-glucosyltransferase; InterPro: IPR016223 The T4 bacteriophage of E

Probab=97.48  E-value=0.04  Score=49.47  Aligned_cols=295  Identities=15%  Similarity=0.134  Sum_probs=145.3

Q ss_pred             CchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCCCccccccchHHHHHHhcCCCC
Q 039338          100 GGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEADKWRYSKGWEQFDEENQREPF  179 (493)
Q Consensus       100 gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (493)
                      .|+.+...++-..+.+.||++.++.........+....        .....+....        ..-+....+.+.  .+
T Consensus         1 CGVTr~a~e~~~wf~KNg~~~~i~~a~e~sftR~dsH~--------~~~~si~k~~--------~~e~de~v~~vN--~y   62 (355)
T PF11440_consen    1 CGVTRNALEMRDWFDKNGVEFTIVSADEKSFTRPDSHD--------SKSFSIPKYL--------AKEYDETVKKVN--DY   62 (355)
T ss_dssp             SHHHHHHHHHHHHHHHTT-EEEEEEETSS--TTTTSSS---------TTTEEEE-T--------TTHHHHHHHHHT--SS
T ss_pred             CCccccHHHHHHHHHhcCCeeEEEEecccccCCccccc--------cceeeeehhh--------HHHHHHHHHHhh--cc
Confidence            37889999999999999999999988765522221111        1111111111        112334444442  89


Q ss_pred             cEEEeCccchhHH----------hhhcc--C-cEEEEeccchhhhhhhhhhhhhhcCCCCccchHhHhHHHHHHHHHHHH
Q 039338          180 DVVHSESVALPHW----------LARNV--T-NLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQGVMLKVLNE  246 (493)
Q Consensus       180 DiI~~~~~~~~~~----------~~~~~--p-~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (493)
                      ||+.+++.+....          +..++  + ++|...|+.......                            |....
T Consensus        63 DI~m~nSvPa~~vqE~~iNnY~kii~~Ik~~ik~V~~~Hdh~~lsI~----------------------------rn~~l  114 (355)
T PF11440_consen   63 DIVMFNSVPATKVQEAIINNYEKIIKKIKPSIKVVGFMHDHNKLSID----------------------------RNPYL  114 (355)
T ss_dssp             SEEEEEE--BTTS-HHHHHHHHHHHHCS-TTSEEEEEE---SHHHHT----------------------------TBSSH
T ss_pred             CEEEEecccCchHHHHHHHHHHHHHHhccccceeEEEeeccceeecc----------------------------ccccH
Confidence            9999987632221          11222  1 357888875433221                            11111


Q ss_pred             HHhhccCCeEEEcChhH--HHHHH-HHhCCC---CCcEEEecCCccCCCccCCcccchhhhhhhCCCCCCcEEE---EEe
Q 039338          247 IRFFNKYAHHVAISDSC--GEMLR-DVYQIP---SERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVL---GVA  317 (493)
Q Consensus       247 ~~~~~~~d~ii~~S~~~--~~~~~-~~~~~~---~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i---~~~  317 (493)
                      ...++.+|.|++.|...  .+.+. ..++-.   .+++.-.|-..+   |++ +.+-...|+.+..+... +..   .|+
T Consensus       115 e~~m~~~DvIfshs~~g~f~kv~m~~l~Ps~~~l~~~i~~~p~v~n---fqp-p~~i~~~Rstywkd~se-~nmnv~~yi  189 (355)
T PF11440_consen  115 EGTMNEMDVIFSHSDNGWFSKVLMKELLPSKVSLFDRIKKFPMVFN---FQP-PMDINKYRSTYWKDVSE-KNMNVNRYI  189 (355)
T ss_dssp             HHHHHH-SEEEES-TTSHHHHTHHHHHS-SS--SSS-------EEE--------B-HHHHHHHH---GGG-SEEEEEEEE
T ss_pred             HHHHHhhcEEEeccccchHHHHHHHhhccccCchhhhhhhcceeee---cCC-cccHHHHHHHHhhhhHh-hhcccceee
Confidence            24567899999988642  22232 333211   123333333222   111 11223556666533333 333   699


Q ss_pred             cccccccChHHHHHHHHHHHhhCCCeEEEEEeCCCcHHH--Hhh-----------------hc--CcEEEecCCCHHHHH
Q 039338          318 GRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQR--YKD-----------------FG--HQVLVMGSMSPAELR  376 (493)
Q Consensus       318 Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~--~~~-----------------l~--~~V~~~g~~~~~~~~  376 (493)
                      ||..-.||...+++.-....+. ++.+-++-|-......  +.+                 ++  .-+-++|..-.+|..
T Consensus       190 gR~Tt~kG~~~mfD~h~~~lK~-~~~~t~~~GierS~A~~~i~d~~~~~~y~~~~~~~~~~~~pN~~~~v~~~Yi~~E~~  268 (355)
T PF11440_consen  190 GRQTTWKGPRRMFDLHEKILKP-AGFKTIMEGIERSPAKISIKDHGIPYEYYPKLDCDEPKPAPNSPVPVYGPYIRSEGL  268 (355)
T ss_dssp             --SSGGG-HHHHHHHHHHTTTT-TT-EEEEE---SSTHHHHHHHTT--EEEE-CTGGGG---SSS--EEEESS--HHHHH
T ss_pred             eeeeeecCcHHHhhhHHHhcCC-cchhHHhhhhhcCCceeeeecCCcccccCccccccCcccCCCCcceecchhhhHHHH
Confidence            9999999999999988886665 7888888884322111  111                 11  337788887789999


Q ss_pred             HHHHHcCEEEeCCC-----CCCCCChHHHHHHHcCC-cEEecC--------CCCCccceeeeCcceEEECC-CHHHHHHH
Q 039338          377 AFYNAIDIFVNPTL-----RPQGLDLTLMEAMMSGK-PVMASR--------FPSIKGTIVVDDEFGFMFAP-NVESLHKT  441 (493)
Q Consensus       377 ~~~~~adv~v~ps~-----~~eg~~~~~~EAm~~G~-PvI~s~--------~~~~~~e~v~~~~~G~~~~~-d~~~l~~~  441 (493)
                      +.++.+-+...-+.     -.+..-.+-+|..|||+ ||.-..        ..|.+  ++......+.++. |.++-.+.
T Consensus       269 ~~Maks~Fgy~~~k~~~~y~~r~mEYt~iE~~A~GtIPVF~k~~GEN~r~~~D~~~--~~~~~~~~I~~De~dle~T~ek  346 (355)
T PF11440_consen  269 ERMAKSLFGYQLSKLQQKYLQRSMEYTQIELIAVGTIPVFDKSWGENNRFTLDGTR--YIDHPYSAIYFDENDLESTVEK  346 (355)
T ss_dssp             HHHHTEEEEEE-----GGG-SS---HHHHHHHHCTSEEEEEHHHHHHSB-TTTSSB--GGSS--S-EEE-TTSHHHHHHH
T ss_pred             HHHhhccceeecHHHHHHHHHhhhhhheeeeeeeceeeeeeccccccceeeecCce--eeccCcceeEeccchHHHHHHH
Confidence            99999988876432     12457789999999999 444432        23322  2333344555555 78888888


Q ss_pred             HHHHHHc
Q 039338          442 LEAAVSE  448 (493)
Q Consensus       442 i~~ll~~  448 (493)
                      |.++.++
T Consensus       347 l~E~a~~  353 (355)
T PF11440_consen  347 LIEVANN  353 (355)
T ss_dssp             HHHHHT-
T ss_pred             HHHHhcc
Confidence            8777654

coli protects its DNA via two glycosyltransferases which glucosylate 5-hydroxymethyl cytosines (5-HMC) using UDP-glucose. These two proteins are the retaining alpha-glucosyltransferase (AGT) and the inverting beta-glucosyltransferase (BGT). The proteins in this family are AGT. AGT adopts the GT-B fold and binds both the sugar donor and acceptor to the C-terminal domain. There is evidence for a role of AGT in the base-flipping mechanism and for its specific recognition of the acceptor base [].; PDB: 1YA6_B 1Y8Z_B 1Y6F_B 1XV5_A 1Y6G_B.

>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule

Probab=97.48  E-value=0.0017  Score=66.57  Aligned_cols=132  Identities=15%  Similarity=0.181  Sum_probs=78.6

Q ss_pred             CCcEEEEEecccccccChHHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhhhcCcEEEecCCCHHHHHHHHHHcCEEEeC
Q 039338          309 NASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDFGHQVLVMGSMSPAELRAFYNAIDIFVNP  388 (493)
Q Consensus       309 ~~~~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~l~~~V~~~g~~~~~~~~~~~~~adv~v~p  388 (493)
                      ++..+++.+|++.. ...+..++++....++.|. +++..-++.   ....+.+|+.+..++|+.++   ++...+-++-
T Consensus       275 ~~~vv~vsfGs~~~-~~~~~~~~~~~~~~~~~~~-~~iW~~~~~---~~~~l~~n~~~~~W~PQ~~l---L~hp~v~~fi  346 (500)
T PF00201_consen  275 KKGVVYVSFGSIVS-SMPEEKLKEIAEAFENLPQ-RFIWKYEGE---PPENLPKNVLIVKWLPQNDL---LAHPRVKLFI  346 (500)
T ss_dssp             TTEEEEEE-TSSST-T-HHHHHHHHHHHHHCSTT-EEEEEETCS---HGCHHHTTEEEESS--HHHH---HTSTTEEEEE
T ss_pred             CCCEEEEecCcccc-hhHHHHHHHHHHHHhhCCC-ccccccccc---ccccccceEEEeccccchhh---hhcccceeee
Confidence            44578889998753 2233333333333333355 566554442   22345589999999998754   5554443333


Q ss_pred             CCCCCCCChHHHHHHHcCCcEEecCCCCCcc---ceeeeCcceEEECC---CHHHHHHHHHHHHHcCcHH
Q 039338          389 TLRPQGLDLTLMEAMMSGKPVMASRFPSIKG---TIVVDDEFGFMFAP---NVESLHKTLEAAVSEGPMR  452 (493)
Q Consensus       389 s~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~---e~v~~~~~G~~~~~---d~~~l~~~i~~ll~~~~~~  452 (493)
                      + +  |--+++.||+.+|+|+|+.+.-+-.-   ..+++.+.|..++.   +.+++.++|.++++| +..
T Consensus       347 t-H--gG~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~vl~~-~~y  412 (500)
T PF00201_consen  347 T-H--GGLNSTQEALYHGVPMLGIPLFGDQPRNAARVEEKGVGVVLDKNDLTEEELRAAIREVLEN-PSY  412 (500)
T ss_dssp             E-S----HHHHHHHHHCT--EEE-GCSTTHHHHHHHHHHTTSEEEEGGGC-SHHHHHHHHHHHHHS-HHH
T ss_pred             e-c--cccchhhhhhhccCCccCCCCcccCCccceEEEEEeeEEEEEecCCcHHHHHHHHHHHHhh-hHH
Confidence            4 2  33569999999999999987543110   24556677888874   789999999999998 543

This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....

>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS)

Probab=97.36  E-value=0.019  Score=53.93  Aligned_cols=96  Identities=19%  Similarity=0.214  Sum_probs=65.7

Q ss_pred             EEEEEecccccccC--hHHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhhhc------CcEEEecCCCHHHHHHHHHHcC
Q 039338          312 LVLGVAGRLVKDKG--HPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDFG------HQVLVMGSMSPAELRAFYNAID  383 (493)
Q Consensus       312 ~~i~~~Gr~~~~Kg--~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~l~------~~V~~~g~~~~~~~~~~~~~ad  383 (493)
                      .+++..|.-.+.|.  .+...++++.+.++  +++++++|...+.+..+++.      ..+.+.|..+-.|+..+++.||
T Consensus       123 ~i~i~~~~~~~~k~w~~~~~~~l~~~l~~~--~~~ivl~g~~~e~~~~~~i~~~~~~~~~~~~~~~~~l~e~~~li~~~~  200 (279)
T cd03789         123 VVVLPPGASGPAKRWPAERFAALADRLLAR--GARVVLTGGPAERELAEEIAAALGGPRVVNLAGKTSLRELAALLARAD  200 (279)
T ss_pred             EEEECCCCCCccccCCHHHHHHHHHHHHHC--CCEEEEEechhhHHHHHHHHHhcCCCccccCcCCCCHHHHHHHHHhCC
Confidence            44445555444444  46778888888765  68889999766555444432      3355678878899999999999


Q ss_pred             EEEeCCCCCCCCChHHHHHHHcCCcEEecCCC
Q 039338          384 IFVNPTLRPQGLDLTLMEAMMSGKPVMASRFP  415 (493)
Q Consensus       384 v~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~  415 (493)
                      ++|-+    ++ | .+--|.++|+|+|+--.+
T Consensus       201 l~I~~----Ds-g-~~HlA~a~~~p~i~l~g~  226 (279)
T cd03789         201 LVVTN----DS-G-PMHLAAALGTPTVALFGP  226 (279)
T ss_pred             EEEee----CC-H-HHHHHHHcCCCEEEEECC
Confidence            99964    23 2 444467999999986433

Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.

>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional

Probab=97.31  E-value=0.049  Score=53.00  Aligned_cols=95  Identities=11%  Similarity=0.070  Sum_probs=64.9

Q ss_pred             cEEEEEecccccccCh--HHHHHHHHHHHhhCCCeEEEEEeCCCc--HHHHhhhc------CcEEEecCCCHHHHHHHHH
Q 039338          311 SLVLGVAGRLVKDKGH--PLLHEAFSKLMVKYPDVYLIVAGSGPW--EQRYKDFG------HQVLVMGSMSPAELRAFYN  380 (493)
Q Consensus       311 ~~~i~~~Gr~~~~Kg~--~~ll~a~~~l~~~~~~~~l~i~G~g~~--~~~~~~l~------~~V~~~g~~~~~~~~~~~~  380 (493)
                      +++++..|.-.+.|.+  +.+.+.++.+.+.  +.+++++|...+  .+..+++.      ..+.+.|..+-.++..+++
T Consensus       184 ~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~~--~~~vvl~ggp~e~e~~~~~~i~~~~~~~~~~~l~g~~sL~el~ali~  261 (352)
T PRK10422        184 NYVVIQPTARQIFKCWDNDKFSAVIDALQAR--GYEVVLTSGPDKDDLACVNEIAQGCQTPPVTALAGKTTFPELGALID  261 (352)
T ss_pred             CeEEEecCCCccccCCCHHHHHHHHHHHHHC--CCeEEEEcCCChHHHHHHHHHHHhcCCCccccccCCCCHHHHHHHHH
Confidence            4677787776666764  4677777777653  568888875432  22223322      2356789888899999999


Q ss_pred             HcCEEEeCCCCCCCCChHHHHHHHcCCcEEecC
Q 039338          381 AIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASR  413 (493)
Q Consensus       381 ~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~  413 (493)
                      .||++|-.    ++-  .+-=|.|+|+|+|+-=
T Consensus       262 ~a~l~v~n----DSG--p~HlAaA~g~P~v~lf  288 (352)
T PRK10422        262 HAQLFIGV----DSA--PAHIAAAVNTPLICLF  288 (352)
T ss_pred             hCCEEEec----CCH--HHHHHHHcCCCEEEEE
Confidence            99999953    332  4444789999999864

>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria

Probab=97.28  E-value=0.0025  Score=53.96  Aligned_cols=105  Identities=11%  Similarity=0.104  Sum_probs=58.1

Q ss_pred             CCCCcEEEeCccchhHH-hhhccCc-EEEEeccchhhhhhhhhhhhhhcCCCCccchHhHhHHHHHHHHHHHHHHhhccC
Q 039338          176 REPFDVVHSESVALPHW-LARNVTN-LAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQGVMLKVLNEIRFFNKY  253 (493)
Q Consensus       176 ~~~~DiI~~~~~~~~~~-~~~~~p~-~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (493)
                      ...||||+.|+.+-..+ +..-.|. .++.+.++++.....+...    .|..+...  .....-.+.. ......+..+
T Consensus        64 Gf~PDvI~~H~GWGe~Lflkdv~P~a~li~Y~E~~y~~~g~d~~F----Dpe~p~~~--~~~~~~r~rN-~~~l~~l~~~  136 (171)
T PF12000_consen   64 GFVPDVIIAHPGWGETLFLKDVFPDAPLIGYFEFYYRASGADVGF----DPEFPPSL--DDRARLRMRN-AHNLLALEQA  136 (171)
T ss_pred             CCCCCEEEEcCCcchhhhHHHhCCCCcEEEEEEEEecCCCCcCCC----CCCCCCCH--HHHHHHHHHh-HHHHHHHHhC
Confidence            66799999997643333 3333342 2344444433222222111    11211111  1111111111 1112446789


Q ss_pred             CeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCc
Q 039338          254 AHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEY  290 (493)
Q Consensus       254 d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~  290 (493)
                      |..+++|.+.++.+-..+   .+|+.||+-|||++.+
T Consensus       137 D~~isPT~wQ~~~fP~~~---r~kI~VihdGiDt~~~  170 (171)
T PF12000_consen  137 DAGISPTRWQRSQFPAEF---RSKISVIHDGIDTDRF  170 (171)
T ss_pred             CcCcCCCHHHHHhCCHHH---HcCcEEeecccchhhc
Confidence            999999999999887765   4799999999998754

This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.

>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins

Probab=97.28  E-value=0.043  Score=51.89  Aligned_cols=149  Identities=17%  Similarity=0.180  Sum_probs=88.4

Q ss_pred             hccCCeEEEcChhHHHHHHHHhCC-CCCcEEEe---cCCccCCCccCCcccchhhhhhhCCCCCCcEEEEEeccccccc-
Q 039338          250 FNKYAHHVAISDSCGEMLRDVYQI-PSERVHVI---LNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVAGRLVKDK-  324 (493)
Q Consensus       250 ~~~~d~ii~~S~~~~~~~~~~~~~-~~~~v~vi---~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Gr~~~~K-  324 (493)
                      ....|.+|+..+.         +. ...++...   +|.++.+....   ....+..+++-.+ .+.+.+.+|.-.... 
T Consensus        95 ~~~FDlvi~p~HD---------~~~~~~Nvl~t~ga~~~i~~~~l~~---a~~~~~~~~~~l~-~p~~avLIGG~s~~~~  161 (311)
T PF06258_consen   95 PRPFDLVIVPEHD---------RLPRGPNVLPTLGAPNRITPERLAE---AAAAWAPRLAALP-RPRVAVLIGGDSKHYR  161 (311)
T ss_pred             ccccCEEEECccc---------CcCCCCceEecccCCCcCCHHHHHH---HHHhhhhhhccCC-CCeEEEEECcCCCCcc
Confidence            3467888988766         22 23344333   34443332211   1223333344222 335555777544322 


Q ss_pred             -ChH---HHHHHHHHHHhhCCCeEEEEEeCCCc----HHHHhhhc---CcEEEecCCCHHHHHHHHHHcCEEEeCCCCCC
Q 039338          325 -GHP---LLHEAFSKLMVKYPDVYLIVAGSGPW----EQRYKDFG---HQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQ  393 (493)
Q Consensus       325 -g~~---~ll~a~~~l~~~~~~~~l~i~G~g~~----~~~~~~l~---~~V~~~g~~~~~~~~~~~~~adv~v~ps~~~e  393 (493)
                       +.+   .+++.+..+.+..+ ..+.|..+..-    .+.++++.   ..+.+...-+..-+..+|+.||.++++.   +
T Consensus       162 ~~~~~~~~l~~~l~~~~~~~~-~~~~vttSRRTp~~~~~~L~~~~~~~~~~~~~~~~~~nPy~~~La~ad~i~VT~---D  237 (311)
T PF06258_consen  162 WDEEDAERLLDQLAALAAAYG-GSLLVTTSRRTPPEAEAALRELLKDNPGVYIWDGTGENPYLGFLAAADAIVVTE---D  237 (311)
T ss_pred             cCHHHHHHHHHHHHHHHHhCC-CeEEEEcCCCCcHHHHHHHHHhhcCCCceEEecCCCCCcHHHHHHhCCEEEEcC---c
Confidence             223   56677777776654 78888876432    22333332   6675556666566999999999999854   3


Q ss_pred             CCChHHHHHHHcCCcEEecCCCC
Q 039338          394 GLDLTLMEAMMSGKPVMASRFPS  416 (493)
Q Consensus       394 g~~~~~~EAm~~G~PvI~s~~~~  416 (493)
                      + -.-+.||++.|+||.+...++
T Consensus       238 S-vSMvsEA~~tG~pV~v~~l~~  259 (311)
T PF06258_consen  238 S-VSMVSEAAATGKPVYVLPLPG  259 (311)
T ss_pred             c-HHHHHHHHHcCCCEEEecCCC
Confidence            4 346899999999999988766

The function of this family is unknown.

>COG2327 WcaK Polysaccharide pyruvyl transferase family protein [Cell wall/membrane/envelope biogenesis]

Probab=97.25  E-value=0.21  Score=48.02  Aligned_cols=190  Identities=15%  Similarity=0.107  Sum_probs=94.9

Q ss_pred             HhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCCCCCCcEEEEEecccccc--cC
Q 039338          248 RFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVAGRLVKD--KG  325 (493)
Q Consensus       248 ~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Gr~~~~--Kg  325 (493)
                      ..++.+..+.+-.+...+.++. .|++..   ...   |+.+.-+.........  .+....+...+ ..-.+.+.  +.
T Consensus       148 ~~~~~~s~i~vRD~~S~~llk~-~gi~a~---l~~---D~Af~L~~~~~~~~~~--~~~~~~~~~~i-~lr~~~~~~t~~  217 (385)
T COG2327         148 YVLGGCSAISVRDPVSYELLKQ-LGINAR---LVT---DPAFLLPASSQNATAS--DVEAREKTVAI-TLRGLHPDNTAQ  217 (385)
T ss_pred             HHhcCCcEEEEecHHhHHHHHH-cCCCeE---eec---Ccceeccccccccccc--ccccccceEEE-EecccCCchhhh
Confidence            4467888888888888888885 676432   222   4433221111100000  11122232334 33333332  22


Q ss_pred             h---HHHHHHHHHHHhh-CCCeEE--EEEeCCCcHHHHhh----hc--CcEEEecCCCHHHHHHHHHHcCEEEeCCCCCC
Q 039338          326 H---PLLHEAFSKLMVK-YPDVYL--IVAGSGPWEQRYKD----FG--HQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQ  393 (493)
Q Consensus       326 ~---~~ll~a~~~l~~~-~~~~~l--~i~G~g~~~~~~~~----l~--~~V~~~g~~~~~~~~~~~~~adv~v~ps~~~e  393 (493)
                      .   ..+-+++..+..+ ...+++  +-.+........+.    ..  .++.+..-...+++-..++++|++|-.-++  
T Consensus       218 ~~~~~~v~~~l~~~~~~~~~~~~i~~~~~~~s~d~~va~~ia~~~~~~~~i~~~~d~~~~~~~~~l~~~dl~Vg~R~H--  295 (385)
T COG2327         218 RSILKYVNEALDLVERQVKALWRITLIDYGASDDLAVADAIAQLVLDSAEILVSSDEYAEELGGILAACDLIVGMRLH--  295 (385)
T ss_pred             HHHHHHHHHHHHHHHHhhhcceEEEeeeccccchhHHHHHHHhhcCCccceEeecchHHHHHHHHhccCceEEeehhH--
Confidence            2   1223444433111 123333  33333222222222    22  566555443346777799999999964433  


Q ss_pred             CCChHHHHHHHcCCcEEecCCCCCccceeee-CcceEEEC--C-CHHHHHHHHHHHHHcCcHHH
Q 039338          394 GLDLTLMEAMMSGKPVMASRFPSIKGTIVVD-DEFGFMFA--P-NVESLHKTLEAAVSEGPMRL  453 (493)
Q Consensus       394 g~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~-~~~G~~~~--~-d~~~l~~~i~~ll~~~~~~~  453 (493)
                          .++=|++.|+|+|+-....-...+.++ +-.++..+  + +.+.+..+..+.+.+.++.+
T Consensus       296 ----saI~al~~g~p~i~i~Y~~K~~~l~~~~gl~~~~~~i~~~~~~~l~~~~~e~~~~~~~~~  355 (385)
T COG2327         296 ----SAIMALAFGVPAIAIAYDPKVRGLMQDLGLPGFAIDIDPLDAEILSAVVLERLTKLDELR  355 (385)
T ss_pred             ----HHHHHHhcCCCeEEEeecHHHHHHHHHcCCCcccccCCCCchHHHHHHHHHHHhccHHHH
Confidence                666699999999997543211111111 22233333  4 88899998888888744433

>PLN03004 UDP-glycosyltransferase

Probab=97.21  E-value=0.046  Score=54.63  Aligned_cols=190  Identities=14%  Similarity=0.054  Sum_probs=103.6

Q ss_pred             HhhccCCeEEEcChhHHH-HHHHHhC--CCCCcEEEecCCccCCCccCC-cccchhhhhhhCCCCCCcEEEEEeccccc-
Q 039338          248 RFFNKYAHHVAISDSCGE-MLRDVYQ--IPSERVHVILNGINENEYGVD-LSLGQSFRSRIGIPKNASLVLGVAGRLVK-  322 (493)
Q Consensus       248 ~~~~~~d~ii~~S~~~~~-~~~~~~~--~~~~~v~vi~ngvd~~~~~~~-~~~~~~~r~~~~i~~~~~~~i~~~Gr~~~-  322 (493)
                      ..+.+++.|++.|-+..+ .+.+.+.  ....++.-|.+-+........ ........+-+.-.+.+..+++.+|+... 
T Consensus       204 ~~~~~~~~vl~NTf~eLE~~~l~~l~~~~~~~~v~~vGPl~~~~~~~~~~~~~~~~c~~wLd~~~~~sVvyvsfGS~~~~  283 (451)
T PLN03004        204 KQLSKSSGIIINTFDALENRAIKAITEELCFRNIYPIGPLIVNGRIEDRNDNKAVSCLNWLDSQPEKSVVFLCFGSLGLF  283 (451)
T ss_pred             HhhcccCeeeeeeHHHhHHHHHHHHHhcCCCCCEEEEeeeccCccccccccchhhHHHHHHHhCCCCceEEEEecccccC
Confidence            446678899988865544 2222221  011345555443311100000 00111233334333344478888898742 


Q ss_pred             -ccChHHHHHHHHHHHhhCCCeEEEEEeCCCc--------H-----HHHhhh-cCcEEEecCCCHHHHHHHHHHcCEEEe
Q 039338          323 -DKGHPLLHEAFSKLMVKYPDVYLIVAGSGPW--------E-----QRYKDF-GHQVLVMGSMSPAELRAFYNAIDIFVN  387 (493)
Q Consensus       323 -~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~--------~-----~~~~~l-~~~V~~~g~~~~~~~~~~~~~adv~v~  387 (493)
                       .+....+..++...    +.--++.+.....        .     ...++. +.++.+.+++|+.+   +++.+++..+
T Consensus       284 ~~~q~~ela~gL~~s----~~~FlW~~r~~~~~~~~~~~~~~~lp~gf~er~~~~g~~v~~W~PQ~~---iL~H~~v~~F  356 (451)
T PLN03004        284 SKEQVIEIAVGLEKS----GQRFLWVVRNPPELEKTELDLKSLLPEGFLSRTEDKGMVVKSWAPQVP---VLNHKAVGGF  356 (451)
T ss_pred             CHHHHHHHHHHHHHC----CCCEEEEEcCCccccccccchhhhCChHHHHhccCCcEEEEeeCCHHH---HhCCCccceE
Confidence             33444455555443    2222334442110        1     011111 26889999999886   6777888444


Q ss_pred             CCCCCCCCChHHHHHHHcCCcEEecCCCC----Cccceeee-CcceEEEC-----C-CHHHHHHHHHHHHHc
Q 039338          388 PTLRPQGLDLTLMEAMMSGKPVMASRFPS----IKGTIVVD-DEFGFMFA-----P-NVESLHKTLEAAVSE  448 (493)
Q Consensus       388 ps~~~eg~~~~~~EAm~~G~PvI~s~~~~----~~~e~v~~-~~~G~~~~-----~-d~~~l~~~i~~ll~~  448 (493)
                      -+ + .| -++++||+++|+|+|+....+    .. ..+.+ -+.|+.++     . +.+++.+++++++.+
T Consensus       357 vT-H-~G-~nS~lEal~~GVP~v~~P~~~DQ~~na-~~~~~~~g~g~~l~~~~~~~~~~e~l~~av~~vm~~  424 (451)
T PLN03004        357 VT-H-CG-WNSILEAVCAGVPMVAWPLYAEQRFNR-VMIVDEIKIAISMNESETGFVSSTEVEKRVQEIIGE  424 (451)
T ss_pred             ec-c-Cc-chHHHHHHHcCCCEEeccccccchhhH-HHHHHHhCceEEecCCcCCccCHHHHHHHHHHHhcC
Confidence            35 2 33 469999999999999986432    11 23333 36777774     3 789999999999976

>PLN02555 limonoid glucosyltransferase

Probab=97.20  E-value=0.11  Score=52.39  Aligned_cols=204  Identities=14%  Similarity=0.050  Sum_probs=105.9

Q ss_pred             HhhccCCeEEEcChhHHH-HHHHHhCCCCCcEEEecCCccCCC-c-cC--C--cccchhhhhhhCCCCCCcEEEEEeccc
Q 039338          248 RFFNKYAHHVAISDSCGE-MLRDVYQIPSERVHVILNGINENE-Y-GV--D--LSLGQSFRSRIGIPKNASLVLGVAGRL  320 (493)
Q Consensus       248 ~~~~~~d~ii~~S~~~~~-~~~~~~~~~~~~v~vi~ngvd~~~-~-~~--~--~~~~~~~r~~~~i~~~~~~~i~~~Gr~  320 (493)
                      ....+++.+++.|-...+ ...+.+.- ..++..|.+-+.... . ..  .  ........+-+.-.+....+.+.+|++
T Consensus       209 ~~~~~a~~vlvNTf~eLE~~~~~~l~~-~~~v~~iGPl~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~  287 (480)
T PLN02555        209 KNLDKPFCILIDTFQELEKEIIDYMSK-LCPIKPVGPLFKMAKTPNSDVKGDISKPADDCIEWLDSKPPSSVVYISFGTV  287 (480)
T ss_pred             HhcccCCEEEEEchHHHhHHHHHHHhh-CCCEEEeCcccCccccccccccccccccchhHHHHHhCCCCCceeEEEeccc
Confidence            346678999998865544 22222211 113555544321100 0 00  0  011122333333333333677788886


Q ss_pred             ccccChHHHHHHHHHHHhhCCCeEEEEE-eCC-----C----c-HHHHhhhcCcEEEecCCCHHHHHHHHHHcCEEEeCC
Q 039338          321 VKDKGHPLLHEAFSKLMVKYPDVYLIVA-GSG-----P----W-EQRYKDFGHQVLVMGSMSPAELRAFYNAIDIFVNPT  389 (493)
Q Consensus       321 ~~~Kg~~~ll~a~~~l~~~~~~~~l~i~-G~g-----~----~-~~~~~~l~~~V~~~g~~~~~~~~~~~~~adv~v~ps  389 (493)
                      .. -..+.+.+.+..+...  +.+++++ ...     .    . ....++..+++.+.+++|+.++... .+...+|.  
T Consensus       288 ~~-~~~~q~~ela~~l~~~--~~~flW~~~~~~~~~~~~~~~lp~~~~~~~~~~g~v~~W~PQ~~iL~H-~~v~~Fvt--  361 (480)
T PLN02555        288 VY-LKQEQIDEIAYGVLNS--GVSFLWVMRPPHKDSGVEPHVLPEEFLEKAGDKGKIVQWCPQEKVLAH-PSVACFVT--  361 (480)
T ss_pred             cC-CCHHHHHHHHHHHHhc--CCeEEEEEecCcccccchhhcCChhhhhhcCCceEEEecCCHHHHhCC-CccCeEEe--
Confidence            52 2233344444444332  3354443 311     0    1 1233344578888999998765433 45666663  


Q ss_pred             CCCCCCChHHHHHHHcCCcEEecCCCCCc---cceeeeC-cceEEEC-------C-CHHHHHHHHHHHHHcCcHHHHHHH
Q 039338          390 LRPQGLDLTLMEAMMSGKPVMASRFPSIK---GTIVVDD-EFGFMFA-------P-NVESLHKTLEAAVSEGPMRLAQRG  457 (493)
Q Consensus       390 ~~~eg~~~~~~EAm~~G~PvI~s~~~~~~---~e~v~~~-~~G~~~~-------~-d~~~l~~~i~~ll~~~~~~~~~~~  457 (493)
                       + .| -++++||+.+|+|+|+...-+-.   ...+.+. +.|+.+.       . +.+++.+++.+++.+ ++ -++++
T Consensus       362 -H-~G-~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~l~~~~~~~~~v~~~~v~~~v~~vm~~-~~-g~~~r  436 (480)
T PLN02555        362 -H-CG-WNSTMEALSSGVPVVCFPQWGDQVTDAVYLVDVFKTGVRLCRGEAENKLITREEVAECLLEATVG-EK-AAELK  436 (480)
T ss_pred             -c-CC-cchHHHHHHcCCCEEeCCCccccHHHHHHHHHHhCceEEccCCccccCcCcHHHHHHHHHHHhcC-ch-HHHHH
Confidence             2 34 45999999999999998653311   0123333 5676661       2 679999999999975 32 23444


Q ss_pred             HHHHHH
Q 039338          458 EACRQY  463 (493)
Q Consensus       458 ~~~~~~  463 (493)
                      +++++.
T Consensus       437 ~ra~~l  442 (480)
T PLN02555        437 QNALKW  442 (480)
T ss_pred             HHHHHH
Confidence            444443

>PLN02152 indole-3-acetate beta-glucosyltransferase

Probab=97.03  E-value=0.016  Score=57.93  Aligned_cols=139  Identities=17%  Similarity=0.129  Sum_probs=82.6

Q ss_pred             hhhhhCCCCCCcEEEEEeccccc--ccChHHHHHHHHHHHhhCCCeEEEEEeCC---------Cc-------HHHHhhhc
Q 039338          300 FRSRIGIPKNASLVLGVAGRLVK--DKGHPLLHEAFSKLMVKYPDVYLIVAGSG---------PW-------EQRYKDFG  361 (493)
Q Consensus       300 ~r~~~~i~~~~~~~i~~~Gr~~~--~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g---------~~-------~~~~~~l~  361 (493)
                      +.+-+.-.+.+.++.+.+|++..  .+..+.+..++.....   . -++++.+.         ..       ....++..
T Consensus       251 ~~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~---~-flWv~r~~~~~~~~~~~~~~~~~~~~~~f~e~~~  326 (455)
T PLN02152        251 YTLWLDSKTESSVIYVSFGTMVELSKKQIEELARALIEGKR---P-FLWVITDKLNREAKIEGEEETEIEKIAGFRHELE  326 (455)
T ss_pred             HHHHhhCCCCCceEEEEecccccCCHHHHHHHHHHHHHcCC---C-eEEEEecCcccccccccccccccccchhHHHhcc
Confidence            44445444444578888898752  4455666666665522   2 23444421         10       11222345


Q ss_pred             CcEEEecCCCHHHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCcc---ceeeeC-cceEEEC-----
Q 039338          362 HQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKG---TIVVDD-EFGFMFA-----  432 (493)
Q Consensus       362 ~~V~~~g~~~~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~---e~v~~~-~~G~~~~-----  432 (493)
                      ++..+.+++|+.+   +++..++.++-+ + .| .++++||+.+|+|+|+-...+-..   ..+.+. +.|+-+.     
T Consensus       327 ~~g~v~~W~PQ~~---iL~h~~vg~fvt-H-~G-~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~  400 (455)
T PLN02152        327 EVGMIVSWCSQIE---VLRHRAVGCFVT-H-CG-WSSSLESLVLGVPVVAFPMWSDQPANAKLLEEIWKTGVRVRENSEG  400 (455)
T ss_pred             CCeEEEeeCCHHH---HhCCcccceEEe-e-CC-cccHHHHHHcCCCEEeccccccchHHHHHHHHHhCceEEeecCcCC
Confidence            7778889998775   566667644444 2 33 459999999999999986433110   122221 2344442     


Q ss_pred             C-CHHHHHHHHHHHHHc
Q 039338          433 P-NVESLHKTLEAAVSE  448 (493)
Q Consensus       433 ~-d~~~l~~~i~~ll~~  448 (493)
                      . +.+++.+++.+++.+
T Consensus       401 ~~~~e~l~~av~~vm~~  417 (455)
T PLN02152        401 LVERGEIRRCLEAVMEE  417 (455)
T ss_pred             cCcHHHHHHHHHHHHhh
Confidence            2 679999999999976

>TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB

Probab=97.03  E-value=0.31  Score=46.11  Aligned_cols=146  Identities=12%  Similarity=0.106  Sum_probs=83.5

Q ss_pred             HhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCCCCCCcEEEEEecccc--cccC
Q 039338          248 RFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVAGRLV--KDKG  325 (493)
Q Consensus       248 ~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Gr~~--~~Kg  325 (493)
                      +.++++|.+.+=.+...+.+++ .|+   ++.+.+..   ...-+.....    .  ....+++.+.+++....  ....
T Consensus       123 ~~l~~~~~i~vRD~~S~~~l~~-~g~---~i~~~~D~---a~~l~~~~~~----~--~~~~~~~~i~i~~r~~~~~~~~~  189 (298)
T TIGR03609       123 RVLRGCRAISVRDAASYRLLKR-LGI---PAELAADP---VWLLPPEPWP----G--GEPLPEPVIVVSLRPWPLLDVSR  189 (298)
T ss_pred             HHHccCCEEEEeCHHHHHHHHH-hCC---CceEeCCh---hhhCCCCccc----c--cccCCCCeEEEEECCCCcCCHHH
Confidence            5678999999988888888876 675   45555432   2211111000    0  00112223333433221  1223


Q ss_pred             hHHHHHHHHHHHhhCCCeEEEEEeC--CCcHHHHhhhc----CcEEEecCCCHHHHHHHHHHcCEEEeCCCCCCCCChHH
Q 039338          326 HPLLHEAFSKLMVKYPDVYLIVAGS--GPWEQRYKDFG----HQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTL  399 (493)
Q Consensus       326 ~~~ll~a~~~l~~~~~~~~l~i~G~--g~~~~~~~~l~----~~V~~~g~~~~~~~~~~~~~adv~v~ps~~~eg~~~~~  399 (493)
                      .+.+.+++..+.++. +.+++++..  ..+.+..+++.    +...++...+.+++..+++++|++|-..++      .+
T Consensus       190 ~~~l~~~l~~l~~~~-g~~v~~i~~~~~~D~~~~~~l~~~~~~~~~i~~~~~~~e~~~~i~~~~~vI~~RlH------~~  262 (298)
T TIGR03609       190 LLRLLRALDRLQRDT-GAFVLFLPFQQPQDLPLARALRDQLLGPAEVLSPLDPEELLGLFASARLVIGMRLH------AL  262 (298)
T ss_pred             HHHHHHHHHHHHHhh-CCeEEEEeCCcchhHHHHHHHHHhcCCCcEEEecCCHHHHHHHHhhCCEEEEechH------HH
Confidence            556777777776653 445544442  23333333332    222333566778999999999999976544      66


Q ss_pred             HHHHHcCCcEEecC
Q 039338          400 MEAMMSGKPVMASR  413 (493)
Q Consensus       400 ~EAm~~G~PvI~s~  413 (493)
                      +=|+.+|+|+|+-.
T Consensus       263 I~A~~~gvP~i~i~  276 (298)
T TIGR03609       263 ILAAAAGVPFVALS  276 (298)
T ss_pred             HHHHHcCCCEEEee
Confidence            77999999999764

The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395).

>COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism]

Probab=97.02  E-value=0.0047  Score=63.78  Aligned_cols=123  Identities=20%  Similarity=0.174  Sum_probs=90.9

Q ss_pred             EEEEEecccccccChHHHHHH----HHHHH-hhCCCeEEEEEeCCC-c----HHHHhh------h---cCcEEEecCCCH
Q 039338          312 LVLGVAGRLVKDKGHPLLHEA----FSKLM-VKYPDVYLIVAGSGP-W----EQRYKD------F---GHQVLVMGSMSP  372 (493)
Q Consensus       312 ~~i~~~Gr~~~~Kg~~~ll~a----~~~l~-~~~~~~~l~i~G~g~-~----~~~~~~------l---~~~V~~~g~~~~  372 (493)
                      +.++++-|+..+|...+.+.-    ...++ +..|.+++++.|... .    ++.++.      .   ..+|.|+...+-
T Consensus       488 lfd~~~kRiheYKRq~Lnl~~i~~ly~~i~~d~~prv~~iFaGKAhP~y~~aK~iIk~I~~~a~~in~~lkVvFl~nYdv  567 (750)
T COG0058         488 LFDGQARRIHEYKRQLLNLLDIERLYRILKEDWVPRVQIIFAGKAHPADYAAKEIIKLINDVADVINNKLKVVFLPNYDV  567 (750)
T ss_pred             ceeeeehhhhhhhhhHHhHhhHHHHHHHHhcCCCCceEEEEeccCCCcchHHHHHHHHHHHHHHhhcccceEEEeCCCCh
Confidence            888999999999987665433    33333 233667778888632 1    111111      1   156899998876


Q ss_pred             HHHHHHHHHcCEEEeCCC-CCCCCChHHHHHHHcCCcEEecCCCCCccceee--eCcceEEECCCH
Q 039338          373 AELRAFYNAIDIFVNPTL-RPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVV--DDEFGFMFAPNV  435 (493)
Q Consensus       373 ~~~~~~~~~adv~v~ps~-~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~--~~~~G~~~~~d~  435 (493)
                      +-...++.+|||-.+.|. .-|..|+.-+-++.-|.+-|+|-.|... |+.+  .++||+.|..+.
T Consensus       568 slA~~iipa~Dvweqis~a~~EASGTsnMK~alNGaltigtlDGanv-Ei~e~vg~~N~~~fG~~~  632 (750)
T COG0058         568 SLAELLIPAADVWEQIPTAGKEASGTSNMKAALNGALTLGTLDGANV-EIYEHVGGENGWIFGETV  632 (750)
T ss_pred             hHHHhhcccccccccCCCCCccccCcCcchHHhcCCceeeccccHHH-HHHHhcCCCceEEeCCch
Confidence            677778999999998665 3488999999999999999999888887 7775  899999998733

>PF11997 DUF3492: Domain of unknown function (DUF3492); InterPro: IPR022622 This domain is functionally uncharacterised and is found in bacteria, archaea and eukaryotes

Probab=96.96  E-value=0.035  Score=51.27  Aligned_cols=53  Identities=15%  Similarity=0.357  Sum_probs=40.6

Q ss_pred             eEEEEEec-cCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccc
Q 039338           84 LKIAVFSR-KWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQ  138 (493)
Q Consensus        84 mkIl~v~~-~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~  138 (493)
                      |+|++|+. .||.  ..||++..+..|++.|.+.-+.|..++...........+..
T Consensus         1 ~~V~ll~EGtYPy--v~GGVSsW~~~LI~glpe~~F~v~~i~a~~~~~~~~~y~lP   54 (268)
T PF11997_consen    1 MDVCLLTEGTYPY--VRGGVSSWVHQLIRGLPEHEFHVYAIGANPEDYGEPRYELP   54 (268)
T ss_pred             CeEEEEecCcCCC--CCCchhHHHHHHHhcCCCceEEEEEEeCCccccCCCcccCC
Confidence            78999998 7886  89999999999999999887888777776533223334433

It is typically between 259 to 282 amino acids in length. This region is found N-terminal PF00534 from PFAM. There are two conserved sequence motifs: GGVS and EHGIY.

>PF04230 PS_pyruv_trans: Polysaccharide pyruvyl transferase; InterPro: IPR007345 Pyruvyl-transferases are involved in peptidoglycan-associated polymer biosynthesis

Probab=96.94  E-value=0.2  Score=46.51  Aligned_cols=152  Identities=16%  Similarity=0.194  Sum_probs=85.6

Q ss_pred             HhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCCCCCCcEEEEEecccccccChH
Q 039338          248 RFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVAGRLVKDKGHP  327 (493)
Q Consensus       248 ~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Gr~~~~Kg~~  327 (493)
                      +++++++.+.+=.+...+.+.+ .|++. ++.++|..+=  ...+.... . ....   .......+..........-.+
T Consensus       123 ~~l~~~~~i~vRD~~S~~~l~~-~g~~~-~~~~~~D~af--~l~~~~~~-~-~~~~---~~~~~~~~~~~~~~~~~~~~~  193 (286)
T PF04230_consen  123 RILSKADYISVRDEYSYELLKK-LGISG-NVKLVPDPAF--LLPPSYPD-E-DKSK---PKRNYISVSNSPSRNNEEYIE  193 (286)
T ss_pred             HHHhCCCEEEECCHHHHHHHHH-cCCCC-CcEEEeCchh--hcCccccc-c-cccc---cccceeeeccccchhhhhHHH
Confidence            5577899988888888885655 67765 7777776541  11111100 0 0000   011101121111112233455


Q ss_pred             HHHHHHHHHHhhCCCeEEEEEeCCCcHH---HH------hhhc-CcEEEecCCCHHHHHHHHHHcCEEEeCCCCCCCCCh
Q 039338          328 LLHEAFSKLMVKYPDVYLIVAGSGPWEQ---RY------KDFG-HQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDL  397 (493)
Q Consensus       328 ~ll~a~~~l~~~~~~~~l~i~G~g~~~~---~~------~~l~-~~V~~~g~~~~~~~~~~~~~adv~v~ps~~~eg~~~  397 (493)
                      .+.+.+..+.+.+..+.+..........   ..      .... .........+.+++.++++.+|++|-..++      
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Is~RlH------  267 (286)
T PF04230_consen  194 EIAELIQRLLDKGYKIVLLPFSPSDDDEDDDDFNEIDIKAEKFFNVIIIDYSLSPDELLELISQADLVISMRLH------  267 (286)
T ss_pred             HHHHHHHHhhcccceeEEEEeeeccchhhHHHHHhhhhhcccccceeEecCCCCHHHHHHHHhcCCEEEecCCH------
Confidence            6667777776654444444444322111   11      1111 344556666889999999999999976654      


Q ss_pred             HHHHHHHcCCcEEecCC
Q 039338          398 TLMEAMMSGKPVMASRF  414 (493)
Q Consensus       398 ~~~EAm~~G~PvI~s~~  414 (493)
                      ..+=|+++|+|+|+-+.
T Consensus       268 ~~I~a~~~g~P~i~i~y  284 (286)
T PF04230_consen  268 GAILALSLGVPVIAISY  284 (286)
T ss_pred             HHHHHHHcCCCEEEEec
Confidence            56669999999998653

CsaB in Bacillus anthracis is necessary for the non-covalent anchoring of proteins containing an SLH (S-layer homology) domain to peptidoglycan-associated pyruvylated polysaccharides. WcaK and AmsJ are involved in the biosynthesis of colanic acid in Escherichia coli and of amylovoran in Erwinia amylovora [, ].

>PLN02167 UDP-glycosyltransferase family protein

Probab=96.83  E-value=0.07  Score=54.05  Aligned_cols=187  Identities=13%  Similarity=0.080  Sum_probs=97.8

Q ss_pred             hhccCCeEEEcChhHHHH-HHHHhC-C--CCCcEEEecCCccCCC-ccCC--cccchhhhhhhCCCCCCcEEEEEecccc
Q 039338          249 FFNKYAHHVAISDSCGEM-LRDVYQ-I--PSERVHVILNGINENE-YGVD--LSLGQSFRSRIGIPKNASLVLGVAGRLV  321 (493)
Q Consensus       249 ~~~~~d~ii~~S~~~~~~-~~~~~~-~--~~~~v~vi~ngvd~~~-~~~~--~~~~~~~r~~~~i~~~~~~~i~~~Gr~~  321 (493)
                      ...+++.|++.|-...+. ..+.+. .  ...++..|..-..... -...  ......+.+-+.-.+.+..+.+.+|++.
T Consensus       212 ~~~~a~~vlvNTf~eLE~~~~~~l~~~~~~~p~v~~vGpl~~~~~~~~~~~~~~~~~~~~~wld~~~~~svvyvsfGS~~  291 (475)
T PLN02167        212 RFPEAKGILVNSFTELEPNAFDYFSRLPENYPPVYPVGPILSLKDRTSPNLDSSDRDRIMRWLDDQPESSVVFLCFGSLG  291 (475)
T ss_pred             hhcccCEeeeccHHHHHHHHHHHHHhhcccCCeeEEeccccccccccCCCCCcchhHHHHHHHhcCCCCceEEEeecccc
Confidence            357789999998665542 222221 0  0124554543221110 0000  0111234444443444446777888874


Q ss_pred             c--ccChHHHHHHHHHHHhhCCCeEEE-EEeCCCc----------HHHHhhhcCcEEEecCCCHHHHHHHHHH--cCEEE
Q 039338          322 K--DKGHPLLHEAFSKLMVKYPDVYLI-VAGSGPW----------EQRYKDFGHQVLVMGSMSPAELRAFYNA--IDIFV  386 (493)
Q Consensus       322 ~--~Kg~~~ll~a~~~l~~~~~~~~l~-i~G~g~~----------~~~~~~l~~~V~~~g~~~~~~~~~~~~~--adv~v  386 (493)
                      .  .+.+..+..++...     +.+++ +++....          ....++..++..+.+++|+.+   +++.  .+.||
T Consensus       292 ~~~~~~~~ela~~l~~~-----~~~flw~~~~~~~~~~~~~~~lp~~~~er~~~rg~v~~w~PQ~~---iL~h~~vg~fv  363 (475)
T PLN02167        292 SLPAPQIKEIAQALELV-----GCRFLWSIRTNPAEYASPYEPLPEGFMDRVMGRGLVCGWAPQVE---ILAHKAIGGFV  363 (475)
T ss_pred             cCCHHHHHHHHHHHHhC-----CCcEEEEEecCcccccchhhhCChHHHHHhccCeeeeccCCHHH---HhcCcccCeEE
Confidence            2  33344454544443     23443 3442111          111222334557789998775   4544  44566


Q ss_pred             eCCCCCCCCChHHHHHHHcCCcEEecCCCCCcc---c-eeeeCcceEEEC---------C-CHHHHHHHHHHHHHc
Q 039338          387 NPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKG---T-IVVDDEFGFMFA---------P-NVESLHKTLEAAVSE  448 (493)
Q Consensus       387 ~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~---e-~v~~~~~G~~~~---------~-d~~~l~~~i~~ll~~  448 (493)
                      .   + .|+ ++++||+++|+|+|+-...+-..   . ++..-+.|+.+.         . +.+++++++++++.+
T Consensus       364 t---H-~G~-nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~l~~av~~~m~~  434 (475)
T PLN02167        364 S---H-CGW-NSVLESLWFGVPIATWPMYAEQQLNAFTMVKELGLAVELRLDYVSAYGEIVKADEIAGAVRSLMDG  434 (475)
T ss_pred             e---e-CCc-ccHHHHHHcCCCEEeccccccchhhHHHHHHHhCeeEEeecccccccCCcccHHHHHHHHHHHhcC
Confidence            3   2 343 49999999999999986433110   1 133345566552         3 789999999999976

>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]

Probab=96.82  E-value=0.23  Score=52.23  Aligned_cols=183  Identities=20%  Similarity=0.265  Sum_probs=120.2

Q ss_pred             cEEEecCCccCCCccCCcccc--hhhhhhhCCCCCCcEEEEEecccccccChHHHHHHHHHHHhhCCC----eEEEEEeC
Q 039338          277 RVHVILNGINENEYGVDLSLG--QSFRSRIGIPKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPD----VYLIVAGS  350 (493)
Q Consensus       277 ~v~vi~ngvd~~~~~~~~~~~--~~~r~~~~i~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~----~~l~i~G~  350 (493)
                      .+..+|-|+|...+.......  ..-..++.-+..++.+++.+-+++..||...=+.++.++..++|+    +.++.+..
T Consensus       240 ~v~~~pigid~~r~v~~~~~~~~~~~~~ei~~~~~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~~  319 (732)
T KOG1050|consen  240 SVKALPIGIDVQRFVKLLELPYVGSKGMEIKEPFKGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIEN  319 (732)
T ss_pred             eeeecccccchHHhhccccchhHHHHHHHHhhhccCCceEecccccccccCchHHHHHHHHHHHhChhhhceEEEEEEec
Confidence            455677788877765432221  111122222232335677888999999999889999999888764    44544443


Q ss_pred             CC--cHHHHhhh---------------c-----CcEEEecCCCHHHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcC--
Q 039338          351 GP--WEQRYKDF---------------G-----HQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSG--  406 (493)
Q Consensus       351 g~--~~~~~~~l---------------~-----~~V~~~g~~~~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G--  406 (493)
                      +.  ..+.++++               +     +-+.+...++..++.+++..+|+.+..+.+ +|..++.+|+..|.  
T Consensus       320 ~~~~~~~~v~~~k~~v~~~v~rIn~~f~~~~~~pV~~~~~~~~~~~l~a~~~Vaev~~v~s~r-dGmnl~~~e~i~~~~~  398 (732)
T KOG1050|consen  320 PKRTDGKEVEELKFCVSVHVRRINEKFGSASYQPVHSLLKDLPFLELLALYKVAEVCPVTSWR-DGMNLVFLEYILCQEN  398 (732)
T ss_pred             CCcccchHHHHHHHHhHhhhhhhhhccCCcccceEEEeeccCCHHHHhhhHHhhhheeecccc-cccchhhhHHHHhhcc
Confidence            21  11111110               1     223466778999999999999999999965 99999999999885  


Q ss_pred             --CcEEecCCCCCccceeeeCcceEEECC-CHHHHHHHHHHHHHcCcHHHHHHHHHHHHH
Q 039338          407 --KPVMASRFPSIKGTIVVDDEFGFMFAP-NVESLHKTLEAAVSEGPMRLAQRGEACRQY  463 (493)
Q Consensus       407 --~PvI~s~~~~~~~e~v~~~~~G~~~~~-d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~  463 (493)
                        .+.|.+..-|.. +..  +....++.+ |.+.++.+|..++..+.+.++..-...+..
T Consensus       399 ~~~~lVlsef~G~~-~tl--~d~aivvnpw~~~~~~~~i~~al~~s~~e~~~r~~~~~~~  455 (732)
T KOG1050|consen  399 KKSVLVLSEFIGDD-TTL--EDAAIVVNPWDGDEFAILISKALTMSDEERELREPKHYKY  455 (732)
T ss_pred             cCCceEEeeecccc-ccc--cccCEEECCcchHHHHHHHHHHhhcCHHHHhhcchhhhhh
Confidence              567777766655 333  334567777 999999999999998555554444444444

>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative

Probab=96.56  E-value=0.48  Score=45.93  Aligned_cols=96  Identities=10%  Similarity=0.114  Sum_probs=64.4

Q ss_pred             CcEEEEEecccccccC--hHHHHHHHHHHHhhCCCeEEEEEeCCC--cHHHHhhhc-----C-cEEEecCCCHHHHHHHH
Q 039338          310 ASLVLGVAGRLVKDKG--HPLLHEAFSKLMVKYPDVYLIVAGSGP--WEQRYKDFG-----H-QVLVMGSMSPAELRAFY  379 (493)
Q Consensus       310 ~~~~i~~~Gr~~~~Kg--~~~ll~a~~~l~~~~~~~~l~i~G~g~--~~~~~~~l~-----~-~V~~~g~~~~~~~~~~~  379 (493)
                      ++++++..|.-.+.|.  .+...+.++.+.++  +.+++++|...  +.+..+++.     . .+.+.|..+-.++..++
T Consensus       181 ~~~i~i~p~a~~~~K~Wp~e~~~~l~~~l~~~--~~~ivl~g~p~~~e~~~~~~i~~~~~~~~~~~l~g~~sL~el~ali  258 (344)
T TIGR02201       181 QNYIVIQPTSRWFFKCWDNDRFSALIDALHAR--GYEVVLTSGPDKDELAMVNEIAQGCQTPRVTSLAGKLTLPQLAALI  258 (344)
T ss_pred             CCEEEEeCCCCccccCCCHHHHHHHHHHHHhC--CCeEEEecCCCHHHHHHHHHHHhhCCCCcccccCCCCCHHHHHHHH
Confidence            3466667776555555  45667777777653  56788888643  222233332     2 24578888889999999


Q ss_pred             HHcCEEEeCCCCCCCCChHHHHHHHcCCcEEecC
Q 039338          380 NAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASR  413 (493)
Q Consensus       380 ~~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~  413 (493)
                      +.||++|-.    ++.  .+==|.|+|+|+|+-=
T Consensus       259 ~~a~l~Vs~----DSG--p~HlAaA~g~p~v~Lf  286 (344)
T TIGR02201       259 DHARLFIGV----DSV--PMHMAAALGTPLVALF  286 (344)
T ss_pred             HhCCEEEec----CCH--HHHHHHHcCCCEEEEE
Confidence            999999953    332  4445889999999863

This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.

>PLN03015 UDP-glucosyl transferase

Probab=96.39  E-value=0.95  Score=45.50  Aligned_cols=187  Identities=11%  Similarity=-0.088  Sum_probs=96.8

Q ss_pred             HhhccCCeEEEcChhHHH-HHHHHhCCC-------CCcEEEecCCccCCCccCCcccchhhhhhhCCCCCCcEEEEEecc
Q 039338          248 RFFNKYAHHVAISDSCGE-MLRDVYQIP-------SERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVAGR  319 (493)
Q Consensus       248 ~~~~~~d~ii~~S~~~~~-~~~~~~~~~-------~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Gr  319 (493)
                      ....+++.+++.|-...+ ...+.+.-.       ..++..|.+-+....  .. .......+-+.-.+.+..+.+.+|+
T Consensus       200 ~~~~~a~gvlvNTf~eLE~~~~~~l~~~~~~~~~~~~~v~~VGPl~~~~~--~~-~~~~~~~~WLd~~~~~sVvyvsFGS  276 (470)
T PLN03015        200 LEVPMSDGVLVNTWEELQGNTLAALREDMELNRVMKVPVYPIGPIVRTNV--HV-EKRNSIFEWLDKQGERSVVYVCLGS  276 (470)
T ss_pred             HhcccCCEEEEechHHHhHHHHHHHHhhcccccccCCceEEecCCCCCcc--cc-cchHHHHHHHHhCCCCCEEEEECCc
Confidence            346789999999965554 222222100       123555543331111  11 1112344444444444577788898


Q ss_pred             ccc--ccChHHHHHHHHHHHhhCCCeEEEEEeCC-----------C-cH-----HHHhhhc-CcEEEecCCCHHHHHHHH
Q 039338          320 LVK--DKGHPLLHEAFSKLMVKYPDVYLIVAGSG-----------P-WE-----QRYKDFG-HQVLVMGSMSPAELRAFY  379 (493)
Q Consensus       320 ~~~--~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g-----------~-~~-----~~~~~l~-~~V~~~g~~~~~~~~~~~  379 (493)
                      ...  .+....+..++...   ..++ ++++...           . ..     ...++.. ..+.+.+++|+.++..  
T Consensus       277 ~~~~~~~q~~ela~gl~~s---~~~F-lWv~r~~~~~~~~~~~~~~~~~~~lp~~f~er~~~rGl~v~~W~PQ~~vL~--  350 (470)
T PLN03015        277 GGTLTFEQTVELAWGLELS---GQRF-VWVLRRPASYLGASSSDDDQVSASLPEGFLDRTRGVGLVVTQWAPQVEILS--  350 (470)
T ss_pred             CCcCCHHHHHHHHHHHHhC---CCcE-EEEEecCccccccccccccchhhcCChHHHHhhccCceEEEecCCHHHHhc--
Confidence            853  33344444444443   2223 3333210           0 00     1111111 2367789999887655  


Q ss_pred             HHcCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCcc---c-eeeeCcceEEEC------C-CHHHHHHHHHHHHH
Q 039338          380 NAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKG---T-IVVDDEFGFMFA------P-NVESLHKTLEAAVS  447 (493)
Q Consensus       380 ~~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~---e-~v~~~~~G~~~~------~-d~~~l~~~i~~ll~  447 (493)
                       ...+..+-+ + .| -++++||+++|+|+|+...-+-..   . +++.-+.|+-+.      . +.+++.++++++++
T Consensus       351 -h~~vg~fvt-H-~G-wnS~~Eai~~GvP~v~~P~~~DQ~~na~~~~~~~gvg~~~~~~~~~~~v~~e~i~~~v~~lm~  425 (470)
T PLN03015        351 -HRSIGGFLS-H-CG-WSSVLESLTKGVPIVAWPLYAEQWMNATLLTEEIGVAVRTSELPSEKVIGREEVASLVRKIVA  425 (470)
T ss_pred             -cCccCeEEe-c-CC-chhHHHHHHcCCCEEecccccchHHHHHHHHHHhCeeEEecccccCCccCHHHHHHHHHHHHc
Confidence             444433323 2 33 359999999999999986422110   1 122335555552      2 77999999999995

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=96.33  E-value=0.45  Score=43.61  Aligned_cols=118  Identities=15%  Similarity=0.040  Sum_probs=67.4

Q ss_pred             EEEEEecccccccChHHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhhhc----CcEEEecCCCHHHHHHHHHHcCEEEe
Q 039338          312 LVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDFG----HQVLVMGSMSPAELRAFYNAIDIFVN  387 (493)
Q Consensus       312 ~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~l~----~~V~~~g~~~~~~~~~~~~~adv~v~  387 (493)
                      .+|+.+|+    |.+..+...   . . ...+.+.+.=....-+...+++    +-|-..|+.+.+.=.++++...+=++
T Consensus       131 ~i~lttG~----k~l~~f~~~---~-~-~~~~~~RvLP~~~~l~~~~~~G~~~~~iia~~gPfs~e~n~al~~~~~i~~l  201 (256)
T TIGR00715       131 RVFLTAGA----SWLSHFSLS---Q-D-EAVVFVRVLPYPQALAQALKLGFPSDRIIAMRGPFSEELEKALLREYRIDAV  201 (256)
T ss_pred             cEEEecCc----chHHHHhhc---c-C-CceEEEEECCCchhhHHHHHcCCChhcEEEEeCCCCHHHHHHHHHHcCCCEE
Confidence            45667776    666555432   1 1 1234555543222333445544    34567788887766778876555333


Q ss_pred             CCCCC---CCCChHHHHHHHcCCcEEecCCCCCccceeeeCcceEEECCCHHHHHHHHHHHH
Q 039338          388 PTLRP---QGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAPNVESLHKTLEAAV  446 (493)
Q Consensus       388 ps~~~---eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~~d~~~l~~~i~~ll  446 (493)
                      -+...   .|+.-++--|+.+|+|||.-+-+..+.       .+-.+. +.+++.+.+.+++
T Consensus       202 VtK~SG~~Gg~~eKi~AA~~lgi~vivI~RP~~~~-------~~~~~~-~~~el~~~l~~~~  255 (256)
T TIGR00715       202 VTKASGEQGGELEKVKAAEALGINVIRIARPQTIP-------GVAIFD-DISQLNQFVARLL  255 (256)
T ss_pred             EEcCCCCccchHHHHHHHHHcCCcEEEEeCCCCCC-------CCccCC-CHHHHHHHHHHhc
Confidence            23221   245578888999999999987765431       011222 6777777776643

This enzyme was found to be a monomer by gel filtration.

>PRK14986 glycogen phosphorylase; Provisional

Probab=96.22  E-value=0.025  Score=59.40  Aligned_cols=133  Identities=14%  Similarity=0.130  Sum_probs=97.7

Q ss_pred             CCCCcEEEEEecccccccChHH-HHHH---HHHHHhhC----CCeEEEEEeCCC-c----HHHHhh---h----------
Q 039338          307 PKNASLVLGVAGRLVKDKGHPL-LHEA---FSKLMVKY----PDVYLIVAGSGP-W----EQRYKD---F----------  360 (493)
Q Consensus       307 ~~~~~~~i~~~Gr~~~~Kg~~~-ll~a---~~~l~~~~----~~~~l~i~G~g~-~----~~~~~~---l----------  360 (493)
                      +++. +.++++-|+..+|...+ ++..   +.++++.-    ...++++.|... .    ++.++.   +          
T Consensus       540 dp~s-Lfd~qakR~heYKRq~LNil~~i~ry~~i~~~p~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp~v  618 (815)
T PRK14986        540 NPKA-LFDVQIKRIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFAGKAASAYYMAKHIIHLINDVAKVINNDPQI  618 (815)
T ss_pred             Cccc-ceeeeehhhhhhhhhhHHHhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcHHHHHHHHHHHHHHHHhccChhh
Confidence            4444 77889999999999888 6555   44454431    247888888632 1    111111   1          


Q ss_pred             cC--cEEEecCCCHHHHHHHHHHcCEEEeCCC-CCCCCChHHHHHHHcCCcEEecCCCCCccceeee--CcceEEECCCH
Q 039338          361 GH--QVLVMGSMSPAELRAFYNAIDIFVNPTL-RPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVD--DEFGFMFAPNV  435 (493)
Q Consensus       361 ~~--~V~~~g~~~~~~~~~~~~~adv~v~ps~-~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~--~~~G~~~~~d~  435 (493)
                      .+  +|.|+...+=+-...++.+||+-.+.|. .-|..|+.-+-+|.-|.+.+++-.|... |+.++  ++||+.|..+.
T Consensus       619 ~~~lkVVFlenY~vslAe~lipg~Dv~eqis~ag~EASGTsnMK~alNGaLtlgtlDG~nv-Ei~e~vG~eN~~~fG~~~  697 (815)
T PRK14986        619 GDKLKVVFIPNYSVSLAQLIIPAADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANV-EMLEHVGEENIFIFGNTA  697 (815)
T ss_pred             cCceeEEEeCCCCHHHHHHhhhhhhhhhhCCCCCccccCcchhhHHhcCceeeeccCCchh-HHHHhcCCCcEEEeCCCH
Confidence            13  7999998877777889999999998665 3488999999999999999999888887 77665  88999998766


Q ss_pred             HHHHHH
Q 039338          436 ESLHKT  441 (493)
Q Consensus       436 ~~l~~~  441 (493)
                      +++.+.
T Consensus       698 ~ev~~~  703 (815)
T PRK14986        698 EEVEAL  703 (815)
T ss_pred             HHHHHH
Confidence            665553

>PLN02534 UDP-glycosyltransferase

Probab=96.21  E-value=1.7  Score=44.17  Aligned_cols=189  Identities=15%  Similarity=0.049  Sum_probs=96.2

Q ss_pred             ccCCeEEEcChhHHH-HHHHHhCC-CCCcEEEecCCccCC-----Ccc-CCcc--cchhhhhhhCCCCCCcEEEEEeccc
Q 039338          251 NKYAHHVAISDSCGE-MLRDVYQI-PSERVHVILNGINEN-----EYG-VDLS--LGQSFRSRIGIPKNASLVLGVAGRL  320 (493)
Q Consensus       251 ~~~d~ii~~S~~~~~-~~~~~~~~-~~~~v~vi~ngvd~~-----~~~-~~~~--~~~~~r~~~~i~~~~~~~i~~~Gr~  320 (493)
                      ..++.|++.|-...+ .+.+.+.- ...++..|.+-+...     ... ....  ......+-+.-.+....+.+.+|+.
T Consensus       214 ~~a~~vlvNTf~eLE~~~l~~l~~~~~~~v~~VGPL~~~~~~~~~~~~~~~~~~~~~~~cl~wLd~~~~~sVvyvsfGS~  293 (491)
T PLN02534        214 STAFGVVVNSFNELEHGCAEAYEKAIKKKVWCVGPVSLCNKRNLDKFERGNKASIDETQCLEWLDSMKPRSVIYACLGSL  293 (491)
T ss_pred             ccCCEEEEecHHHhhHHHHHHHHhhcCCcEEEECcccccccccccccccCCccccchHHHHHHHhcCCCCceEEEEeccc
Confidence            457788888866555 22222210 113566565433211     000 0000  1122344444444445778888987


Q ss_pred             ccccChHHHHHHHHHHHhhCCCeEEEEEeCCC---c-H-----HHHh-h-hcCcEEEecCCCHHHHHHHHHHcCEEEeCC
Q 039338          321 VKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGP---W-E-----QRYK-D-FGHQVLVMGSMSPAELRAFYNAIDIFVNPT  389 (493)
Q Consensus       321 ~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~---~-~-----~~~~-~-l~~~V~~~g~~~~~~~~~~~~~adv~v~ps  389 (493)
                      .. -..+.+.+.+.-|...+..+ ++++..+.   . .     +-+. . .+.++.+.|++|+.+   +++..++..+-+
T Consensus       294 ~~-~~~~q~~e~a~gl~~~~~~f-lW~~r~~~~~~~~~~~~~p~gf~~~~~~~g~~v~~w~pq~~---iL~h~~v~~fvt  368 (491)
T PLN02534        294 CR-LVPSQLIELGLGLEASKKPF-IWVIKTGEKHSELEEWLVKENFEERIKGRGLLIKGWAPQVL---ILSHPAIGGFLT  368 (491)
T ss_pred             cc-CCHHHHHHHHHHHHhCCCCE-EEEEecCccccchhhhcCchhhHHhhccCCeeccCCCCHHH---HhcCCccceEEe
Confidence            53 23333444444443332223 34444211   0 0     1112 2 236788889999865   566677744334


Q ss_pred             CCCCCCChHHHHHHHcCCcEEecCCCCCcc---c-eeeeCcceEEEC---------------C-CHHHHHHHHHHHHH
Q 039338          390 LRPQGLDLTLMEAMMSGKPVMASRFPSIKG---T-IVVDDEFGFMFA---------------P-NVESLHKTLEAAVS  447 (493)
Q Consensus       390 ~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~---e-~v~~~~~G~~~~---------------~-d~~~l~~~i~~ll~  447 (493)
                         .+-.++++||+++|+|+|+....+-..   . +++.=+.|+-+.               . +.+++++++++++.
T Consensus       369 ---H~G~ns~~ea~~~GvP~v~~P~~~dq~~na~~~~e~~~vGv~~~~~~~~~~~~~~~~~~~v~~eev~~~v~~~m~  443 (491)
T PLN02534        369 ---HCGWNSTIEGICSGVPMITWPLFAEQFLNEKLIVEVLRIGVRVGVEVPVRWGDEERVGVLVKKDEVEKAVKTLMD  443 (491)
T ss_pred             ---cCccHHHHHHHHcCCCEEeccccccHHHHHHHHHHhhcceEEecccccccccccccccCccCHHHHHHHHHHHhc
Confidence               233569999999999999986432110   0 111112222210               1 67899999999996

>PF12038 DUF3524: Domain of unknown function (DUF3524); InterPro: IPR022701 This domain is functionally uncharacterised and is found in bacteria and eukaryotes

Probab=96.12  E-value=0.15  Score=42.45  Aligned_cols=129  Identities=17%  Similarity=0.142  Sum_probs=71.1

Q ss_pred             eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCCCcccc
Q 039338           84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEADKWRY  163 (493)
Q Consensus        84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (493)
                      |||+++.++|     .|.....+..|++.+   .|+++++|.....                             ..|+.
T Consensus         1 M~ILlle~y~-----ggSHk~~~~~L~~~~---~~~~~lltLP~r~-----------------------------w~WRm   43 (168)
T PF12038_consen    1 MRILLLEPYY-----GGSHKQWADGLAAHS---EHEWTLLTLPARK-----------------------------WHWRM   43 (168)
T ss_pred             CeEEEEcccc-----ccCHHHHHHHHHHhc---cCCEEEEEcCCCc-----------------------------ccccc
Confidence            8999999864     234444444455554   4899999875544                             11111


Q ss_pred             cc-chHHHHHHhcCCCCcEEEeCcc-chhHHhh-----hccCcEEEEeccchhhhhhhhhhhhhhcCCCCccchHhHhHH
Q 039338          164 SK-GWEQFDEENQREPFDVVHSESV-ALPHWLA-----RNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSL  236 (493)
Q Consensus       164 ~~-~~~~~~~~~~~~~~DiI~~~~~-~~~~~~~-----~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (493)
                      .. +.....+......+|+|++.+. .+..+++     ...| .++.+|+-...+..+.-               ..+..
T Consensus        44 Rg~AL~~a~~~~~~~~~dll~aTsmldLa~l~gL~p~l~~~p-~ilYFHENQl~YP~~~~---------------~~rd~  107 (168)
T PF12038_consen   44 RGAALYFAQQIPLSHSYDLLFATSMLDLATLRGLRPDLANVP-KILYFHENQLAYPVSPG---------------QERDF  107 (168)
T ss_pred             CCCHHHHhhccccccCCCEEEeeccccHHHHHhhccCCCCCC-EEEEEecCcccCCCCCC---------------ccccc
Confidence            11 1122234445667899999875 2333322     2345 89999985543322211               01111


Q ss_pred             HHHHHHHHHHHHhhccCCeEEEcChhHHHHHHH
Q 039338          237 QGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRD  269 (493)
Q Consensus       237 ~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~  269 (493)
                      ...+..+    ...-.||.|+..|.+-++.+.+
T Consensus       108 ~~~~~ni----~saLaAD~v~FNS~~nr~sFL~  136 (168)
T PF12038_consen  108 QYGMNNI----YSALAADRVVFNSAFNRDSFLD  136 (168)
T ss_pred             cHHHHHH----HHHHhceeeeecchhhHHHHHH
Confidence            1111111    2233689999999998886655

It is about 170 amino acids in length and is found associated with PF00534 from PFAM. Two conserved sequence motifs are found within this entry: HENQ and FNS. There is also a single completely conserved residue S that may be functionally important.

>COG1887 TagB Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC [Cell envelope biogenesis, outer membrane]

Probab=96.01  E-value=0.39  Score=47.02  Aligned_cols=187  Identities=12%  Similarity=0.170  Sum_probs=111.3

Q ss_pred             hhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchh--hhhhhCCCCCCcEEEEEeccccccc--
Q 039338          249 FFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQS--FRSRIGIPKNASLVLGVAGRLVKDK--  324 (493)
Q Consensus       249 ~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~--~r~~~~i~~~~~~~i~~~Gr~~~~K--  324 (493)
                      ...+.|...+.+......+.+-+++..+++.....+-....+.........  .+..++++.++ .+|+|.-.+.+..  
T Consensus       145 ~~~~~dy~~~~~~~~~~if~~~f~~~~~~i~~~G~Pr~D~~~~~~~~~~~~~~~~~~~~~~~~k-~vIlyaPTfr~~~~~  223 (388)
T COG1887         145 VRNHWDYLISPNPESTAIFAEAFNIDKENILETGYPRNDKLFDEAGKTEDILLIQLALPLPQDK-KVILYAPTFRDNDVL  223 (388)
T ss_pred             eeeeeeeeeeCChhhHHHHHHHhcccccceeecCcccchhhhhhccchhhhHHHhhhcCCcccC-ceEEecCCccCCccc
Confidence            345678888888888888888788877777666555444334332222222  34456666666 6677988887654  


Q ss_pred             -C---hHHHH--HHHHHHHhhCCCeEEEEEeCCCcHHHHh---hhcCcEEEecCCCHHHHHHHHHHcCEEEeCCCCCCCC
Q 039338          325 -G---HPLLH--EAFSKLMVKYPDVYLIVAGSGPWEQRYK---DFGHQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGL  395 (493)
Q Consensus       325 -g---~~~ll--~a~~~l~~~~~~~~l~i~G~g~~~~~~~---~l~~~V~~~g~~~~~~~~~~~~~adv~v~ps~~~eg~  395 (493)
                       +   ....+  +.+.+...+ .+..+++-=.....+...   +..+.+...-.  ..++.++|..+|++|.      -+
T Consensus       224 ~~~~~~~~~~~~~~~~~~l~~-~~~~ii~k~Hp~is~~~~~~~~~~~~~~~vs~--~~di~dll~~sDiLIT------Dy  294 (388)
T COG1887         224 IGTQFFNLDIDIEKLKEKLGE-NEYVIIVKPHPLISDKIDKRYALDDFVLDVSD--NADINDLLLVSDILIT------DY  294 (388)
T ss_pred             cchhhhhhhhhHHHHHHhhcc-CCeEEEEecChhhhhhhhhhhhccceeEeccc--chhHHHHHhhhCEEEe------ec
Confidence             2   22333  333333221 355555543322221111   12232333333  3799999999999994      35


Q ss_pred             ChHHHHHHHcCCcEEecCCCCCccce---------eeeCcceEEECCCHHHHHHHHHHHHHc
Q 039338          396 DLTLMEAMMSGKPVMASRFPSIKGTI---------VVDDEFGFMFAPNVESLHKTLEAAVSE  448 (493)
Q Consensus       396 ~~~~~EAm~~G~PvI~s~~~~~~~e~---------v~~~~~G~~~~~d~~~l~~~i~~ll~~  448 (493)
                      +.+.+|+|...+|||..-... . +.         ......|-++. +.+++.++|.....+
T Consensus       295 SSv~fdf~~l~KPiify~~D~-~-~y~~~rg~~~d~~~~~Pg~~~~-~~~~li~ai~~~~~~  353 (388)
T COG1887         295 SSVIFDFMLLDKPIIFYTYDL-E-QYDELRGFYLDYKFEAPGEVVE-TQEELIDAIKPYDED  353 (388)
T ss_pred             hHHHHHHHHhcCcEEEEecCh-H-HHHhhhhhhhhHHhcCCccccc-cHHHHHHHHHhhhcc
Confidence            669999999999999863211 1 11         11223344444 778899999888876

>PF15024 Glyco_transf_18: Glycosyltransferase family 18

Probab=95.76  E-value=0.18  Score=50.62  Aligned_cols=143  Identities=16%  Similarity=0.182  Sum_probs=97.8

Q ss_pred             cccChHHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhhhcCcEEEecCCCHHHHHHHHHHcCEEEeCCCCCCCCChHHHH
Q 039338          322 KDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDFGHQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLME  401 (493)
Q Consensus       322 ~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~l~~~V~~~g~~~~~~~~~~~~~adv~v~ps~~~eg~~~~~~E  401 (493)
                      ..||-+..++++.+.    -+++-.|.+...   ....+...|.-+|.++++++..+++.+.++|=...-.||  -+.+|
T Consensus       289 ~w~~k~~~l~~l~~~----~eih~tV~~~~~---~~~~~P~~V~NHG~l~~~ef~~lL~~akvfiGlGfP~Eg--PaPlE  359 (559)
T PF15024_consen  289 MWKGKEKYLDVLHKY----MEIHGTVYDEPQ---RPPNVPSFVKNHGILSGDEFQQLLRKAKVFIGLGFPYEG--PAPLE  359 (559)
T ss_pred             hhcCcHHHHHHHHhh----cEEEEEeccCCC---CCcccchhhhhcCcCCHHHHHHHHHhhhEeeecCCCCCC--CChHH
Confidence            367777777777654    356666655322   222334568889999999999999999999954422233  48999


Q ss_pred             HHHcCCcEEecCCCCCcc--------------ce---------eeeCcceEEECC-CHHHHHHHHHHHHHcCcHHHHHHH
Q 039338          402 AMMSGKPVMASRFPSIKG--------------TI---------VVDDEFGFMFAP-NVESLHKTLEAAVSEGPMRLAQRG  457 (493)
Q Consensus       402 Am~~G~PvI~s~~~~~~~--------------e~---------v~~~~~G~~~~~-d~~~l~~~i~~ll~~~~~~~~~~~  457 (493)
                      |++.|+|.|-.....-..              ++         ....-.-+.++. |.+++.+||++++.+..       
T Consensus       360 Aia~G~vFlNp~~~pp~s~~n~~ff~~KPt~r~~~SQhPY~e~~iG~PhVytVd~~n~~~v~~Avk~il~~~v-------  432 (559)
T PF15024_consen  360 AIANGCVFLNPRFNPPHSRLNTEFFKGKPTLREWTSQHPYAEEFIGEPHVYTVDINNSTEVEAAVKAILATPV-------  432 (559)
T ss_pred             HHHcCCccccccCCCCCcccccccccCCCCcceeccCChHHHhhCCCCeEEEEcCCCHHHHHHHHHHHHhcCC-------
Confidence            999999998765421110              11         111234567777 99999999999999832       


Q ss_pred             HHHHHHHHHhcCHHHHHHHHHHHHHH
Q 039338          458 EACRQYAASMFTANKMALAYERLFLC  483 (493)
Q Consensus       458 ~~~~~~~~~~fs~~~~~~~~~~~~~~  483 (493)
                         .-++--.|+.+.+.+++..+++.
T Consensus       433 ---~Py~P~efT~egmLeRv~~~ie~  455 (559)
T PF15024_consen  433 ---EPYLPYEFTCEGMLERVNALIEK  455 (559)
T ss_pred             ---CCcCCcccCHHHHHHHHHHHHHh
Confidence               13444558999999998777653

>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=95.61  E-value=0.1  Score=47.85  Aligned_cols=97  Identities=18%  Similarity=0.164  Sum_probs=62.0

Q ss_pred             CCCcEEEEEecccccccChH--HHHHHHHHHHhhCCCeEEEEEeCCCc--HHHHhhhc-----CcEEEecCCCHHHHHHH
Q 039338          308 KNASLVLGVAGRLVKDKGHP--LLHEAFSKLMVKYPDVYLIVAGSGPW--EQRYKDFG-----HQVLVMGSMSPAELRAF  378 (493)
Q Consensus       308 ~~~~~~i~~~Gr~~~~Kg~~--~ll~a~~~l~~~~~~~~l~i~G~g~~--~~~~~~l~-----~~V~~~g~~~~~~~~~~  378 (493)
                      .+++++++..|.-.+.|.+.  ...+.+..+.+.+  .+++++|.+.+  .+..+++.     ..+.+.|..+-.++..+
T Consensus       103 ~~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~--~~vvl~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~al  180 (247)
T PF01075_consen  103 KDKPYIGINPGASWPSKRWPAEKWAELIERLKERG--YRVVLLGGPEEQEKEIADQIAAGLQNPVINLAGKTSLRELAAL  180 (247)
T ss_dssp             TTSSEEEEE---SSGGGS--HHHHHHHHHHHCCCT---EEEE--SSHHHHHHHHHHHHTTHTTTTEEETTTS-HHHHHHH
T ss_pred             ccCCeEEEeecCCCccccCCHHHHHHHHHHHHhhC--ceEEEEccchHHHHHHHHHHHHhcccceEeecCCCCHHHHHHH
Confidence            34457777888767777754  4778888887654  78888887655  33333332     26888899888999999


Q ss_pred             HHHcCEEEeCCCCCCCCChHHHHHHHcCCcEEec
Q 039338          379 YNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMAS  412 (493)
Q Consensus       379 ~~~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s  412 (493)
                      ++.||++|-+-    +.  .+-=|.++|+|+|+-
T Consensus       181 i~~a~~~I~~D----tg--~~HlA~a~~~p~v~l  208 (247)
T PF01075_consen  181 ISRADLVIGND----TG--PMHLAAALGTPTVAL  208 (247)
T ss_dssp             HHTSSEEEEES----SH--HHHHHHHTT--EEEE
T ss_pred             HhcCCEEEecC----Ch--HHHHHHHHhCCEEEE
Confidence            99999999643    32  455589999999987

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.

>cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases

Probab=95.54  E-value=0.066  Score=56.41  Aligned_cols=133  Identities=14%  Similarity=0.123  Sum_probs=97.0

Q ss_pred             CCCCcEEEEEecccccccChHH-HHHH---HHHHHhhC----CCeEEEEEeCCC-c----HHHHhh---h----------
Q 039338          307 PKNASLVLGVAGRLVKDKGHPL-LHEA---FSKLMVKY----PDVYLIVAGSGP-W----EQRYKD---F----------  360 (493)
Q Consensus       307 ~~~~~~~i~~~Gr~~~~Kg~~~-ll~a---~~~l~~~~----~~~~l~i~G~g~-~----~~~~~~---l----------  360 (493)
                      +++. +..+++-|+..+|...+ ++..   +.++++.-    .+.++++.|... .    ++.++.   +          
T Consensus       527 dp~s-lfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~in~Dp~v  605 (797)
T cd04300         527 DPDS-LFDVQVKRIHEYKRQLLNVLHIIHLYNRIKENPNADIVPRTFIFGGKAAPGYYMAKLIIKLINAVADVVNNDPDV  605 (797)
T ss_pred             CCCc-cEEEEeeechhhhhhhhHHHhhHHHHHHHHhCCCcCCCCeEEEEeccCCCCcHHHHHHHHHHHHHHHHhccChhc
Confidence            4444 77889999999999888 5554   45554431    247788888632 1    111111   1          


Q ss_pred             cC--cEEEecCCCHHHHHHHHHHcCEEEeCCC-CCCCCChHHHHHHHcCCcEEecCCCCCccceeee--CcceEEECCCH
Q 039338          361 GH--QVLVMGSMSPAELRAFYNAIDIFVNPTL-RPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVD--DEFGFMFAPNV  435 (493)
Q Consensus       361 ~~--~V~~~g~~~~~~~~~~~~~adv~v~ps~-~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~--~~~G~~~~~d~  435 (493)
                      .+  +|.|+....=+-...++.+||+-.+.|. .-|..|+.-+-+|.-|.+.|+|--|... |+.++  ++|+++|-.+.
T Consensus       606 ~~~lkVVFlenY~VslAe~iipaaDvseqis~ag~EASGTsnMK~~lNGaltlgtlDGanv-Ei~e~vG~eN~fiFG~~~  684 (797)
T cd04300         606 GDKLKVVFLPNYNVSLAEKIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANV-EIAEEVGEENIFIFGLTA  684 (797)
T ss_pred             CCceEEEEeCCCChHHHHHhhhhhhhhhhCCCCCccccCCchhhHHhcCceeeecccchhH-HHHHHhCcCcEEEeCCCH
Confidence            13  6999998877777889999999998665 3488899999999999999999888877 77666  78999998766


Q ss_pred             HHHHHH
Q 039338          436 ESLHKT  441 (493)
Q Consensus       436 ~~l~~~  441 (493)
                      ++..+.
T Consensus       685 ~ev~~~  690 (797)
T cd04300         685 EEVEAL  690 (797)
T ss_pred             HHHHHH
Confidence            665543

It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.

>PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase []

Probab=95.54  E-value=0.057  Score=46.30  Aligned_cols=82  Identities=15%  Similarity=0.086  Sum_probs=54.7

Q ss_pred             hHHHHHHhcCCCCcEEEeCccchhH-----Hhhhc----cCcEEEEeccchhhhhhhhhhhhhhcCCCCccchHhHhHHH
Q 039338          167 WEQFDEENQREPFDVVHSESVALPH-----WLARN----VTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQ  237 (493)
Q Consensus       167 ~~~~~~~~~~~~~DiI~~~~~~~~~-----~~~~~----~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (493)
                      .+.+.+.+++.+||+|++..+....     +..++    +| ++..+-|+..  .|.                       
T Consensus        78 ~~~l~~~l~~~~PD~IIsThp~~~~~~l~~lk~~~~~~~~p-~~tvvTD~~~--~H~-----------------------  131 (169)
T PF06925_consen   78 ARRLIRLLREFQPDLIISTHPFPAQVPLSRLKRRGRLPNIP-VVTVVTDFDT--VHP-----------------------  131 (169)
T ss_pred             HHHHHHHHhhcCCCEEEECCcchhhhHHHHHHHhhcccCCc-EEEEEcCCCC--CCc-----------------------
Confidence            3467777789999999987663222     22222    23 4544444311  010                       


Q ss_pred             HHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCC
Q 039338          238 GVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNG  284 (493)
Q Consensus       238 ~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ng  284 (493)
                               .++-+.+|..++.|+.+++.+.+ .|++++++.+..-+
T Consensus       132 ---------~W~~~~~D~y~Vase~~~~~l~~-~Gi~~~~I~vtGiP  168 (169)
T PF06925_consen  132 ---------FWIHPGVDRYFVASEEVKEELIE-RGIPPERIHVTGIP  168 (169)
T ss_pred             ---------CeecCCCCEEEECCHHHHHHHHH-cCCChhHEEEeCcc
Confidence                     14457899999999999999999 79999999886543

; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process

>PRK14985 maltodextrin phosphorylase; Provisional

Probab=95.02  E-value=0.065  Score=56.17  Aligned_cols=133  Identities=14%  Similarity=0.104  Sum_probs=96.1

Q ss_pred             CCCCcEEEEEecccccccChHH-HHHHHH---HHHhhC----CCeEEEEEeCCC-c----HHHHh---hh----------
Q 039338          307 PKNASLVLGVAGRLVKDKGHPL-LHEAFS---KLMVKY----PDVYLIVAGSGP-W----EQRYK---DF----------  360 (493)
Q Consensus       307 ~~~~~~~i~~~Gr~~~~Kg~~~-ll~a~~---~l~~~~----~~~~l~i~G~g~-~----~~~~~---~l----------  360 (493)
                      +++. +.++++-|+..+|...+ ++..+.   ++++.-    ...++++.|... .    +..++   .+          
T Consensus       526 dp~s-lfdvq~kR~heYKRq~Lnil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~in~Dp~v  604 (798)
T PRK14985        526 NPQA-IFDVQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYLAKNIIFAINKVAEVINNDPLV  604 (798)
T ss_pred             Cchh-cchhhHhhhhhhhhhhhHhhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcHHHHHHHHHHHHHHHHhcCChhh
Confidence            4444 77788999999999887 665544   444330    237888888632 1    11111   11          


Q ss_pred             cC--cEEEecCCCHHHHHHHHHHcCEEEeCCC-CCCCCChHHHHHHHcCCcEEecCCCCCccceeee--CcceEEECCCH
Q 039338          361 GH--QVLVMGSMSPAELRAFYNAIDIFVNPTL-RPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVD--DEFGFMFAPNV  435 (493)
Q Consensus       361 ~~--~V~~~g~~~~~~~~~~~~~adv~v~ps~-~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~--~~~G~~~~~d~  435 (493)
                      .+  +|.|+...+=+-...++.+||+-.+.|. .-|..|+.-+-+|.-|.+.|++-.|... |+.++  ++||+.|-.+.
T Consensus       605 ~~~lkVVFlenY~VslAe~lipaaDvseqis~ag~EASGTsnMK~amNGaLtlgtlDGanv-Ei~e~vG~eN~f~fG~~~  683 (798)
T PRK14985        605 GDKLKVVFLPDYCVSAAELLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANV-EIAEQVGEENIFIFGHTV  683 (798)
T ss_pred             CCceeEEEeCCCChHHHHHHhhhhhhhhhCCCCCccccCcchhHHHhcCceeeecccchHH-HHHHHhCcCcEEEeCCCH
Confidence            12  6999998877778889999999998665 3488899999999999999999888877 66654  78999998766


Q ss_pred             HHHHHH
Q 039338          436 ESLHKT  441 (493)
Q Consensus       436 ~~l~~~  441 (493)
                      +++.+.
T Consensus       684 ~ev~~~  689 (798)
T PRK14985        684 EQVKAL  689 (798)
T ss_pred             HHHHHH
Confidence            665543

>PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=94.99  E-value=0.98  Score=47.18  Aligned_cols=189  Identities=19%  Similarity=0.265  Sum_probs=113.0

Q ss_pred             hccCCeEEEcChhHHHHHHH-----HhCCCCCcEEEecCCccCCCccCC--ccc--------------------------
Q 039338          250 FNKYAHHVAISDSCGEMLRD-----VYQIPSERVHVILNGINENEYGVD--LSL--------------------------  296 (493)
Q Consensus       250 ~~~~d~ii~~S~~~~~~~~~-----~~~~~~~~v~vi~ngvd~~~~~~~--~~~--------------------------  296 (493)
                      +..+..+-.+|.--.+.+++     .+++.++++.-+-|||....|-..  +..                          
T Consensus       329 l~~S~~vNGVS~LH~ev~k~~~f~~f~~l~P~kf~nvTNGVh~rrWl~~~nP~L~~L~~~~iG~~W~~d~~~l~~l~~~~  408 (713)
T PF00343_consen  329 LRGSHSVNGVSKLHGEVLKQMVFKDFYELWPEKFGNVTNGVHPRRWLSQANPELSELITEYIGDDWRTDLEQLEKLEKFA  408 (713)
T ss_dssp             HHCESEEEESSHHHHHHHHHTTTHHHHHHSGGGEEE----B-TCCCCCCTSHHHHHHHHHHHTSGGGCSGGGGGGGGGGC
T ss_pred             HHhcccccchHHHHHHHHHHHHhhhhhhcCCceeeccccCccCcccccccCHHHHHHHHHHhccccccCHHHHHHHHHhh
Confidence            34456678888777666543     344556789999999988777421  100                          


Q ss_pred             --------------------chhhhhhhC--CCCCCcEEEEEecccccccChHH-H---HHHHHHHHhh----CCCeEEE
Q 039338          297 --------------------GQSFRSRIG--IPKNASLVLGVAGRLVKDKGHPL-L---HEAFSKLMVK----YPDVYLI  346 (493)
Q Consensus       297 --------------------~~~~r~~~~--i~~~~~~~i~~~Gr~~~~Kg~~~-l---l~a~~~l~~~----~~~~~l~  346 (493)
                                          .+.+++..+  ++++. +..+++-|+..+|...+ +   ++-+.++++.    ...++++
T Consensus       409 dd~~~~~~~~~vK~~~K~rl~~~i~~~~~~~ldp~s-lfdv~~rR~heYKRq~LniL~ii~~y~rik~~p~~~~~Pv~~I  487 (713)
T PF00343_consen  409 DDEEFQEELREVKQENKERLAEYIKKRTGVELDPDS-LFDVQARRFHEYKRQLLNILHIIDRYNRIKNNPNKKIRPVQFI  487 (713)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHHHHHHHHSS---TTS-EEEEEES-SCCCCTHHHHHHHHHHHHHHHHHSTTSCCS-EEEE
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCcch-hhhhhhhhcccccccCcccccHHHHHHHHHhcccCCCCCeEEE
Confidence                                011122344  34444 78889999999999877 3   3445555553    1358899


Q ss_pred             EEeCC-Cc----HHHHhh-------------hcC--cEEEecCCCHHHHHHHHHHcCEEEeCCC-CCCCCChHHHHHHHc
Q 039338          347 VAGSG-PW----EQRYKD-------------FGH--QVLVMGSMSPAELRAFYNAIDIFVNPTL-RPQGLDLTLMEAMMS  405 (493)
Q Consensus       347 i~G~g-~~----~~~~~~-------------l~~--~V~~~g~~~~~~~~~~~~~adv~v~ps~-~~eg~~~~~~EAm~~  405 (493)
                      +.|.. |.    ++.++.             ..+  +|.|+...+-+-...++.++||-++.+. -.|..|+.-+-+|.-
T Consensus       488 FaGKAhP~d~~gK~iIk~I~~va~~in~Dp~v~~~lkVvFlenYdvslA~~lipg~DVwln~p~~p~EASGTSgMK~~~N  567 (713)
T PF00343_consen  488 FAGKAHPGDYMGKEIIKLINNVAEVINNDPEVGDRLKVVFLENYDVSLAEKLIPGVDVWLNIPTRPKEASGTSGMKAAMN  567 (713)
T ss_dssp             EE----TT-HHHHHHHHHHHHHHHHHCT-TTTCCGEEEEEETT-SHHHHHHHGGG-SEEEE---TTSSSS-SHHHHHHHT
T ss_pred             EeccCCCCcHHHHHHHHHHHHHHHHHhcChhhccceeEEeecCCcHHHHHHHhhhhhhhhhCCCCCccccCCCcchhhcC
Confidence            99963 11    112211             113  6999999887778889999999999665 348899999999999


Q ss_pred             CCcEEecCCCCCccceee--eCcceEEECCCHHHHHH
Q 039338          406 GKPVMASRFPSIKGTIVV--DDEFGFMFAPNVESLHK  440 (493)
Q Consensus       406 G~PvI~s~~~~~~~e~v~--~~~~G~~~~~d~~~l~~  440 (493)
                      |.+.+++-.|... |+.+  ..++.++|-.+.+++.+
T Consensus       568 GaL~lstlDG~ni-Ei~e~vG~eN~fiFG~~~~ev~~  603 (713)
T PF00343_consen  568 GALNLSTLDGWNI-EIAEAVGEENIFIFGLTAEEVEE  603 (713)
T ss_dssp             T-EEEEESSTCHH-HHHHHH-GGGSEEES-BHHHHHH
T ss_pred             CCeEEecccchhH-HHHHhcCCCcEEEcCCCHHHHHH
Confidence            9999999888877 6654  35688998766666543

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B ....

>KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion]

Probab=94.79  E-value=0.7  Score=47.31  Aligned_cols=131  Identities=15%  Similarity=0.104  Sum_probs=75.2

Q ss_pred             EEEEEeccccc-----ccChHHHHHHHHHHHhhCCCeEEEEEeCCCcHH-HHhhhc----CcEEEecCCCHHHHHHHHHH
Q 039338          312 LVLGVAGRLVK-----DKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQ-RYKDFG----HQVLVMGSMSPAELRAFYNA  381 (493)
Q Consensus       312 ~~i~~~Gr~~~-----~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~-~~~~l~----~~V~~~g~~~~~~~~~~~~~  381 (493)
                      .+++..|....     .+....+..++..+    +++.|+..=.+.... ..+.+.    .+|.+.+++|+.++.  +..
T Consensus       279 vvyvSfGS~~~~~~lp~~~~~~l~~~l~~~----~~~~FiW~~~~~~~~~~~~~~~~~~~~nV~~~~W~PQ~~ll--l~H  352 (496)
T KOG1192|consen  279 VVYISFGSMVNSADLPEEQKKELAKALESL----QGVTFLWKYRPDDSIYFPEGLPNRGRGNVVLSKWAPQNDLL--LDH  352 (496)
T ss_pred             eEEEECCcccccccCCHHHHHHHHHHHHhC----CCceEEEEecCCcchhhhhcCCCCCcCceEEecCCCcHHHh--cCC
Confidence            67778888763     33444555555555    456655544332222 223332    479999999988876  222


Q ss_pred             cCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCC----CccceeeeCcceEEECC--CHHHHHHHHHHHHHcCcHH
Q 039338          382 IDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPS----IKGTIVVDDEFGFMFAP--NVESLHKTLEAAVSEGPMR  452 (493)
Q Consensus       382 adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~----~~~e~v~~~~~G~~~~~--d~~~l~~~i~~ll~~~~~~  452 (493)
                      ..+.++-+ + .|++ +++|++.+|+|+|+.+.-+    ....+...+..++....  +...+.+++..++.+ ++.
T Consensus       353 ~~v~~FvT-H-gG~n-St~E~~~~GvP~v~~Plf~DQ~~Na~~i~~~g~~~v~~~~~~~~~~~~~~~~~il~~-~~y  425 (496)
T KOG1192|consen  353 PAVGGFVT-H-GGWN-STLESIYSGVPMVCVPLFGDQPLNARLLVRHGGGGVLDKRDLVSEELLEAIKEILEN-EEY  425 (496)
T ss_pred             CcCcEEEE-C-Cccc-HHHHHHhcCCceecCCccccchhHHHHHHhCCCEEEEehhhcCcHHHHHHHHHHHcC-hHH
Confidence            22333334 3 5665 5599999999999654321    11123344444444443  333488888888877 444

>PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses []

Probab=94.68  E-value=0.16  Score=48.10  Aligned_cols=71  Identities=18%  Similarity=0.228  Sum_probs=50.7

Q ss_pred             HHHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcCC-cEEecCCCCCc-cceeeeCcceEEECC-CHHHHHHHHH
Q 039338          372 PAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGK-PVMASRFPSIK-GTIVVDDEFGFMFAP-NVESLHKTLE  443 (493)
Q Consensus       372 ~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G~-PvI~s~~~~~~-~e~v~~~~~G~~~~~-d~~~l~~~i~  443 (493)
                      ..+..+.|+.+.+++.|.-. .....-++|||++|| |||.++.--.+ ++++.-....+.++. +..+|.+.|+
T Consensus       227 ~~~~~~~l~~S~FCL~p~G~-~~~s~Rl~eal~~GcIPVii~d~~~lPf~~~ldw~~fsv~v~~~~~~~l~~iL~  300 (302)
T PF03016_consen  227 PSEYMELLRNSKFCLCPRGD-GPWSRRLYEALAAGCIPVIISDDYVLPFEDVLDWSRFSVRVPEADLPELPEILR  300 (302)
T ss_pred             chHHHHhcccCeEEEECCCC-CcccchHHHHhhhceeeEEecCcccCCcccccCHHHEEEEECHHHHHHHHHHHh
Confidence            35688999999999998732 336788999999999 88887643333 245655677778876 6655555544

Mutations in two homologous genes, EXT1 and EXT2, are responsible for the EXT syndrome. The human and mouse EXT genes have at least two homologs in the invertebrate Caenorhabditis elegans, indicating that they do not function exclusively as regulators of bone growth. EXT1 and EXT2 have both been shown to encode glycosyltransferases involved in the chain elongation step of heparan sulphate biosynthesis [].; GO: 0016020 membrane

>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT

Probab=94.67  E-value=0.52  Score=43.87  Aligned_cols=84  Identities=17%  Similarity=0.230  Sum_probs=56.9

Q ss_pred             ChHHHHHHHHHHHhhCCCeEEEEEeCC-----CcHHHHhhhc--CcEEEecCCCHHHHHHHHHHcCEEEeCCCCCCCCCh
Q 039338          325 GHPLLHEAFSKLMVKYPDVYLIVAGSG-----PWEQRYKDFG--HQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDL  397 (493)
Q Consensus       325 g~~~ll~a~~~l~~~~~~~~l~i~G~g-----~~~~~~~~l~--~~V~~~g~~~~~~~~~~~~~adv~v~ps~~~eg~~~  397 (493)
                      ....+++.+..+.+..|+.+++|==..     .....+.++.  .++.+...  ...+.+++..||.++.-+      +.
T Consensus       138 ~~~~~~~~l~~~~~~~p~~~lvvK~HP~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~Ll~~s~~Vvtin------St  209 (269)
T PF05159_consen  138 SQADFLDMLESFAKENPDAKLVVKPHPDERGGNKYSYLEELPNLPNVVIIDD--DVNLYELLEQSDAVVTIN------ST  209 (269)
T ss_pred             cHhHHHHHHHHHHHHCCCCEEEEEECchhhCCCChhHhhhhhcCCCeEEECC--CCCHHHHHHhCCEEEEEC------CH
Confidence            456677777888777788888775432     1223344432  44444332  247889999999999633      45


Q ss_pred             HHHHHHHcCCcEEecCCCC
Q 039338          398 TLMEAMMSGKPVMASRFPS  416 (493)
Q Consensus       398 ~~~EAm~~G~PvI~s~~~~  416 (493)
                      +-+||+.+|+||++....-
T Consensus       210 vGlEAll~gkpVi~~G~~~  228 (269)
T PF05159_consen  210 VGLEALLHGKPVIVFGRAF  228 (269)
T ss_pred             HHHHHHHcCCceEEecCcc
Confidence            9999999999999986433

Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport

>TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases

Probab=94.52  E-value=0.15  Score=53.59  Aligned_cols=133  Identities=16%  Similarity=0.119  Sum_probs=96.3

Q ss_pred             CCCCcEEEEEecccccccChHH-HHHH---HHHHHhhC----CCeEEEEEeCCC-c----HHHHhh---h----------
Q 039338          307 PKNASLVLGVAGRLVKDKGHPL-LHEA---FSKLMVKY----PDVYLIVAGSGP-W----EQRYKD---F----------  360 (493)
Q Consensus       307 ~~~~~~~i~~~Gr~~~~Kg~~~-ll~a---~~~l~~~~----~~~~l~i~G~g~-~----~~~~~~---l----------  360 (493)
                      +++. +..+++-|+..+|...+ ++..   +.++++.-    ...++++.|... .    ++.++.   +          
T Consensus       524 dp~s-lfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~iN~Dp~v  602 (794)
T TIGR02093       524 DPNS-IFDVQVKRLHEYKRQLLNVLHVIYLYNRIKEDPPKDIVPRTVIFGGKAAPGYHMAKLIIKLINSVAEVVNNDPAV  602 (794)
T ss_pred             Cccc-cchhhheechhhhHHHHHHhhhHHHHHHHHhCCCcCCCCeEEEEEecCCCCcHHHHHHHHHHHHHHHHhccChhh
Confidence            3444 77788999999999888 5555   44444331    246788888632 1    111111   1          


Q ss_pred             cC--cEEEecCCCHHHHHHHHHHcCEEEeCCC-CCCCCChHHHHHHHcCCcEEecCCCCCccceeee--CcceEEECCCH
Q 039338          361 GH--QVLVMGSMSPAELRAFYNAIDIFVNPTL-RPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVD--DEFGFMFAPNV  435 (493)
Q Consensus       361 ~~--~V~~~g~~~~~~~~~~~~~adv~v~ps~-~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~--~~~G~~~~~d~  435 (493)
                      .+  +|.|+...+=+-...++.+||+-.+.|. .-|..|+.-+-+|.-|.+.|+|--|... |+.++  ++|+++|-.+.
T Consensus       603 ~~~lkVVFlenY~VslAe~iipaaDvseqistag~EASGTsnMK~alNGaltlgtlDGanv-Ei~e~vG~eN~fiFG~~~  681 (794)
T TIGR02093       603 GDKLKVVFVPNYNVSLAELIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANV-EIREEVGAENIFIFGLTV  681 (794)
T ss_pred             CCceeEEEeCCCChHHHHHhhhhhhhhhhCCCCCccccCcchhHHHhcCcceeecccchhH-HHHHHhCcccEEEcCCCH
Confidence            13  6999998877777889999999998665 3488899999999999999999888877 77666  78999998776


Q ss_pred             HHHHHH
Q 039338          436 ESLHKT  441 (493)
Q Consensus       436 ~~l~~~  441 (493)
                      ++..+.
T Consensus       682 ~ev~~~  687 (794)
T TIGR02093       682 EEVEAL  687 (794)
T ss_pred             HHHHHH
Confidence            666544

This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources.

>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides

Probab=92.67  E-value=0.41  Score=41.63  Aligned_cols=35  Identities=31%  Similarity=0.484  Sum_probs=25.6

Q ss_pred             HhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecC
Q 039338          248 RFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILN  283 (493)
Q Consensus       248 ~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~n  283 (493)
                      ..++..|.|.+.|+..++.+.+ .|.+.+++.+..|
T Consensus       145 ~~l~~f~~i~aqs~~da~r~~~-lG~~~~~v~v~Gn  179 (186)
T PF04413_consen  145 PLLSRFDRILAQSEADAERFRK-LGAPPERVHVTGN  179 (186)
T ss_dssp             HHGGG-SEEEESSHHHHHHHHT-TT-S--SEEE---
T ss_pred             HHHHhCCEEEECCHHHHHHHHH-cCCCcceEEEeCc
Confidence            5678999999999999999998 6888889999887

Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=92.41  E-value=1.2  Score=44.60  Aligned_cols=37  Identities=27%  Similarity=0.303  Sum_probs=27.7

Q ss_pred             CCCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecC
Q 039338           80 SKFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSP  126 (493)
Q Consensus        80 ~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~  126 (493)
                      ..+.|||++.          ||.+..-..|++.|.++||+|+++...
T Consensus       117 ~~~~mkILVT----------GatGFIGs~Lv~~Ll~~G~~V~~ldr~  153 (436)
T PLN02166        117 GRKRLRIVVT----------GGAGFVGSHLVDKLIGRGDEVIVIDNF  153 (436)
T ss_pred             ccCCCEEEEE----------CCccHHHHHHHHHHHHCCCEEEEEeCC
Confidence            3456998877          444455567999999999999988643

>PF10933 DUF2827: Protein of unknown function (DUF2827); InterPro: IPR021234 This is a family of uncharacterised proteins found in Burkholderia

Probab=92.35  E-value=11  Score=36.07  Aligned_cols=315  Identities=15%  Similarity=0.132  Sum_probs=170.5

Q ss_pred             CCCchHHHHHHHHHHHHhCC--CEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCCCccccccchHHHHHHhc
Q 039338           98 TPGGMERHAHTLHVALARRG--HRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEADKWRYSKGWEQFDEENQ  175 (493)
Q Consensus        98 ~~gG~~~~~~~l~~~L~~~G--~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (493)
                      ...|+...+.-|+..|.+..  ++|+++....... .+...        ..+...+.              ...+...  
T Consensus        16 W~NGi~QN~~fL~~lL~qs~~v~~V~Lvn~g~~~~-~~~~~--------~~~~~~~~--------------~~~~~~~--   70 (364)
T PF10933_consen   16 WENGINQNCIFLAMLLQQSPRVESVVLVNGGDGNP-IPAAL--------MLDLLDVP--------------LVDFDDA--   70 (364)
T ss_pred             hhhchhhHHHHHHHHHhhCCCcceEEEEECCCCCc-CCccc--------ccccCCCc--------------eecHHHh--
Confidence            45688888899999999875  7899988755430 11000        01111111              1223333  


Q ss_pred             CCCCcEEEeCccchh-----HHhhhccCcEEEEeccchhhhhhhhhhhhhhcCCCCccchHhHhHHHHHHHHHHHHHHhh
Q 039338          176 REPFDVVHSESVALP-----HWLARNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQGVMLKVLNEIRFF  250 (493)
Q Consensus       176 ~~~~DiI~~~~~~~~-----~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (493)
                      ..+.||++--+..+.     .+.+++.+ ++....|..+.......   +..++....                   -.-
T Consensus        71 ~~~lDVlIEmg~ql~~~~~~~~~~~G~K-vV~y~~GndYv~~~E~~---lF~k~~~~~-------------------f~~  127 (364)
T PF10933_consen   71 IDELDVLIEMGAQLDPEWLDYMRARGGK-VVSYRCGNDYVMDIESM---LFNKPSGHL-------------------FNG  127 (364)
T ss_pred             cccCCEEEEccCccCHHHHHHHHHcCCe-EEEEeCCchHHHHhhHH---hcCCCCCcc-------------------CCC
Confidence            237899987665333     33334444 88888886554322111   111111000                   012


Q ss_pred             ccCCeEEEcChhH---HHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCCCC-CCcEEE-EEecccccccC
Q 039338          251 NKYAHHVAISDSC---GEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPK-NASLVL-GVAGRLVKDKG  325 (493)
Q Consensus       251 ~~~d~ii~~S~~~---~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~-~~~~~i-~~~Gr~~~~Kg  325 (493)
                      ...|.|.++-+..   ..+++-.+   ..+++++|.--++-++......-+.-..++|-.+ .....+ +|=-+++-.|.
T Consensus       128 ~~yD~VW~lPq~~~~~~~yl~~l~---r~Pv~~vP~iWsP~F~~~~~~~l~~~~~~FGY~p~~~~~RvavfEPNi~vvK~  204 (364)
T PF10933_consen  128 APYDEVWTLPQFENTCAPYLETLH---RCPVRVVPHIWSPRFLDQRIAQLPEHGLRFGYQPGRPGKRVAVFEPNISVVKT  204 (364)
T ss_pred             CCCceeEeccchhhhchHHHHHHh---cCCceeeCccCCchhHHHHHHhhhhcCCccccccCCCCceEEEecCCceEEee
Confidence            3567777665533   23444433   4567888875555443221111000001122211 111222 23344444554


Q ss_pred             h---HHHHHHHHHHHhhCCC-eE-EEEEeCCCcH--H----HHhhhc----CcEEEecCCCHHHHHHHHHH-cCEEEeCC
Q 039338          326 H---PLLHEAFSKLMVKYPD-VY-LIVAGSGPWE--Q----RYKDFG----HQVLVMGSMSPAELRAFYNA-IDIFVNPT  389 (493)
Q Consensus       326 ~---~~ll~a~~~l~~~~~~-~~-l~i~G~g~~~--~----~~~~l~----~~V~~~g~~~~~~~~~~~~~-adv~v~ps  389 (493)
                      -   -++.|++-+-.   |+ +. +.++-.-..+  .    ....+.    ....|.|..   +++.++++ .|++|.--
T Consensus       205 ~~~PmLi~E~aYR~~---P~~v~~~~V~Nt~~~ke~~~F~~f~~~ldlvr~gkasfegR~---~~p~fla~~tD~VvSHq  278 (364)
T PF10933_consen  205 CFIPMLICEEAYRAD---PDAVEHVYVTNTYHLKEHPTFVNFANSLDLVRDGKASFEGRF---DFPDFLAQHTDAVVSHQ  278 (364)
T ss_pred             cCccHHHHHHHHHhC---hhhcceEEEecchhhhcCHHHHHHHHhhHHhhcCeeEEeeec---ChHHHHHhCCCEEEecc
Confidence            2   23334443332   32 33 3333322111  1    112221    677888887   66676665 68888544


Q ss_pred             CCCCCCChHHHHHHHcCCcEEecCCCCCccceeeeCcceEEECC-CHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHhc
Q 039338          390 LRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAP-NVESLHKTLEAAVSEGPMRLAQRGEACRQYAASMF  468 (493)
Q Consensus       390 ~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~~-d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~f  468 (493)
                       |.-+....-+||+.-|=|.|-..      .++.  +.|+.++. |..+=+++|.+++.+....++...+++++.+.. +
T Consensus       279 -WeN~lNYlY~daLyggYPLVHNS------~~l~--d~GYYY~~fD~~~G~r~L~~A~~~HD~~~~~Y~~ra~~~l~~-~  348 (364)
T PF10933_consen  279 -WENPLNYLYYDALYGGYPLVHNS------PLLK--DVGYYYPDFDAFEGARQLLRAIREHDADLDAYRARARRLLDR-L  348 (364)
T ss_pred             -ccchhhHHHHHHHhcCCCcccCc------chhc--ccCcCCCCccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHh-h
Confidence             55567778999999999999543      3333  28999999 999999999999988677888888888888776 4


Q ss_pred             CH--HHHHHHHHH
Q 039338          469 TA--NKMALAYER  479 (493)
Q Consensus       469 s~--~~~~~~~~~  479 (493)
                      +.  +..++.|.+
T Consensus       349 ~p~n~~nv~~y~~  361 (364)
T PF10933_consen  349 SPENPANVRAYEA  361 (364)
T ss_pred             CCCCHHHHHHHHH
Confidence            43  334444443

>PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2

Probab=92.28  E-value=1.7  Score=43.16  Aligned_cols=166  Identities=13%  Similarity=0.130  Sum_probs=75.4

Q ss_pred             eEEEEEecc--CC-----CCCCCCchHHHHHHHHHHHHhC--------CC----EEEEEecCCCCCCCCCCccccCCCCC
Q 039338           84 LKIAVFSRK--WP-----ISTTPGGMERHAHTLHVALARR--------GH----RVHIFTSPVDNINSPSISHQENDDGS  144 (493)
Q Consensus        84 mkIl~v~~~--~p-----~~~~~gG~~~~~~~l~~~L~~~--------G~----~V~v~~~~~~~~~~~~~~~~~~~~~~  144 (493)
                      -+|++++.+  |-     ..+..||--.++..++++|.+.        |-    +|.++|.--.+  ........... .
T Consensus       273 f~vvliSpHG~f~q~nvLG~pDTGGQVvYVleqarALe~e~~~ri~~~gl~i~p~i~i~TRlIpd--~~~t~~~q~le-~  349 (550)
T PF00862_consen  273 FNVVLISPHGYFGQENVLGRPDTGGQVVYVLEQARALENEMLYRIKLQGLDITPKIDIVTRLIPD--AKGTTCNQRLE-K  349 (550)
T ss_dssp             SEEEEE--SS--STTSTTSSTTSSHHHHHHHHHHHHHHHHTHHHHHHTT-----EEEEEEE--TB--TTCGGGTSSEE-E
T ss_pred             EEEEEEcCccccccccccCCCCCCCcEEEEeHHHHHHHHHHHHHHHhcCCCCCCceeeecccccC--CcCCCcccccc-c
Confidence            489999873  10     1147799999999999999753        43    47777764433  11111111110 0


Q ss_pred             CCCCCceEee---cCCCC----cc-ccccchHHHH--------HHh--cCCCCcEEEeCcc--ch-hHHhhh--ccCcEE
Q 039338          145 NNKYPLLHFH---EGEAD----KW-RYSKGWEQFD--------EEN--QREPFDVVHSESV--AL-PHWLAR--NVTNLA  201 (493)
Q Consensus       145 ~~~~~~~~~~---~~~~~----~~-~~~~~~~~~~--------~~~--~~~~~DiI~~~~~--~~-~~~~~~--~~p~~v  201 (493)
                      ..+....+++   .+...    .| .....|..+.        ++.  ...+||+||.|-.  .+ ...++.  ++| ..
T Consensus       350 ~~gt~~a~IlRvPF~~~~gi~~kwisrf~lWPyLe~fa~d~~~~i~~e~~~~PdlI~GnYsDgnlvA~LLs~~lgv~-~~  428 (550)
T PF00862_consen  350 VSGTENARILRVPFGPEKGILRKWISRFDLWPYLEEFADDAEREILAELQGKPDLIIGNYSDGNLVASLLSRKLGVT-QC  428 (550)
T ss_dssp             ETTESSEEEEEE-ESESTEEE-S---GGG-GGGHHHHHHHHHHHHHHHHTS--SEEEEEHHHHHHHHHHHHHHHT-E-EE
T ss_pred             cCCCCCcEEEEecCCCCcchhhhccchhhchhhHHHHHHHHHHHHHHHhCCCCcEEEeccCcchHHHHHHHhhcCCc-ee
Confidence            0111112222   11111    11 1122232221        111  2578999999843  22 233333  446 67


Q ss_pred             EEeccchhhhh-hhhhhhhhhcCCCCccchHhHhHHHHHHHHHHHHHHhhccCCeEEEcChhHHH
Q 039338          202 VSWHGIALESL-QSGIFQDLTRKPLEPMSLAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGE  265 (493)
Q Consensus       202 ~~~h~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~  265 (493)
                      .+-|...-... .++++.+            -...-+....++..+...+..+|.||+-+.....
T Consensus       429 ~iaHsLek~Ky~~s~~~w~------------e~e~~Yhfs~qftAd~iamn~adfIItST~QEI~  481 (550)
T PF00862_consen  429 FIAHSLEKTKYEDSDLYWK------------EIEEKYHFSCQFTADLIAMNAADFIITSTYQEIA  481 (550)
T ss_dssp             EE-SS-HHHHHHTTTTTSH------------HHHHHH-HHHHHHHHHHHHHHSSEEEESSHHHHH
T ss_pred             hhhhccccccccccCCCHH------------HHHhhccchhhhhHHHHHhhcCCEEEEcchHhhc
Confidence            77776532111 1221111            1133445556666677788999999998765544

4.1.13 from EC in the following reaction: UDP-glucose + D-fructose = UDP + sucrose This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family IPR001296 from INTERPRO. This enzyme is found mainly in plants but also appears in bacteria.; GO: 0005985 sucrose metabolic process; PDB: 2R60_A 2R66_A 2R68_A 3S27_G 3S29_A 3S28_A.

>KOG3349 consensus Predicted glycosyltransferase [General function prediction only]

Probab=91.57  E-value=2.3  Score=34.82  Aligned_cols=95  Identities=18%  Similarity=0.189  Sum_probs=56.9

Q ss_pred             EEEEEecccccccChHHHHH------HHHHHHhhCCCeEEEE-EeCCC----cH-HHHhhhcCcEEEecCCCHHHHHHHH
Q 039338          312 LVLGVAGRLVKDKGHPLLHE------AFSKLMVKYPDVYLIV-AGSGP----WE-QRYKDFGHQVLVMGSMSPAELRAFY  379 (493)
Q Consensus       312 ~~i~~~Gr~~~~Kg~~~ll~------a~~~l~~~~~~~~l~i-~G~g~----~~-~~~~~l~~~V~~~g~~~~~~~~~~~  379 (493)
                      .+|+.+|.-.    ++.++.      +...|.+.+- .+|+| +|+|.    .. +... ....+.+.|+-=...+.+.+
T Consensus         5 ~vFVTVGtT~----Fd~LI~~Vl~~~~~~~L~k~G~-~kLiiQ~Grg~~~~~d~~~~~~-k~~gl~id~y~f~psl~e~I   78 (170)
T KOG3349|consen    5 TVFVTVGTTS----FDDLISCVLSEEFLQELQKRGF-TKLIIQIGRGQPFFGDPIDLIR-KNGGLTIDGYDFSPSLTEDI   78 (170)
T ss_pred             EEEEEecccc----HHHHHHHHcCHHHHHHHHHcCc-cEEEEEecCCccCCCCHHHhhc-ccCCeEEEEEecCccHHHHH
Confidence            5677888754    555553      3445555442 34444 67762    11 1111 22444444443235888999


Q ss_pred             HHcCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCC
Q 039338          380 NAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSI  417 (493)
Q Consensus       380 ~~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~  417 (493)
                      +.||+++-   + .|.| +.+|.+..|+|.|+--...+
T Consensus        79 ~~AdlVIs---H-AGaG-S~letL~l~KPlivVvNd~L  111 (170)
T KOG3349|consen   79 RSADLVIS---H-AGAG-SCLETLRLGKPLIVVVNDSL  111 (170)
T ss_pred             hhccEEEe---c-CCcc-hHHHHHHcCCCEEEEeChHh
Confidence            99999994   2 3333 99999999999988754443

>COG4394 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=90.83  E-value=4.5  Score=36.96  Aligned_cols=46  Identities=15%  Similarity=0.244  Sum_probs=39.7

Q ss_pred             CcEEEecCCCHHHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcCCcEEecC
Q 039338          362 HQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASR  413 (493)
Q Consensus       362 ~~V~~~g~~~~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~  413 (493)
                      -+|..++++++++..+++..||+-+.   ++|.   +..-|..+|+|.+=.-
T Consensus       238 lrvvklPFvpqddyd~LL~lcD~n~V---RGED---SFVRAq~agkPflWHI  283 (370)
T COG4394         238 LRVVKLPFVPQDDYDELLWLCDFNLV---RGED---SFVRAQLAGKPFLWHI  283 (370)
T ss_pred             eEEEEecCCcHhHHHHHHHhccccee---ecch---HHHHHHHcCCCcEEEe
Confidence            46788999999999999999999876   5676   7889999999998653

>PF10093 DUF2331: Uncharacterized protein conserved in bacteria (DUF2331); InterPro: IPR016633 This entry describes a conserved hypothetical protein that typically is encoded next to the gene efp for translation elongation factor P

Probab=90.71  E-value=3  Score=40.16  Aligned_cols=104  Identities=17%  Similarity=0.233  Sum_probs=69.3

Q ss_pred             chhhhhhhCCCC--CCcEEEEEecccccccC-hHHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhh------h-------
Q 039338          297 GQSFRSRIGIPK--NASLVLGVAGRLVKDKG-HPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKD------F-------  360 (493)
Q Consensus       297 ~~~~r~~~~i~~--~~~~~i~~~Gr~~~~Kg-~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~------l-------  360 (493)
                      +..+..++|++.  .+...+..+   ...+. +..++++++.-   ...+.+.|.++- ....++.      +       
T Consensus       168 ~~~~~~~lg~~~~~~~~~~vslF---~Ye~~~l~~ll~~~~~~---~~pv~llvp~g~-~~~~~~~~~~~~~~~~g~~~~  240 (374)
T PF10093_consen  168 RAAFLRRLGLPEPEPGALRVSLF---CYENAALASLLDAWAAS---PKPVHLLVPEGR-ALNSLAAWLGDALLQAGDSWQ  240 (374)
T ss_pred             HHHHHHHcCCCCCCCCCeEEEEE---eCCchHHHHHHHHHhcC---CCCeEEEecCCc-cHHHHHHHhccccccCccccc
Confidence            455667788752  222443332   23333 67777777744   246777777642 2222210      1       


Q ss_pred             --cCcEEEecCCCHHHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcCCcEEecC
Q 039338          361 --GHQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASR  413 (493)
Q Consensus       361 --~~~V~~~g~~~~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~  413 (493)
                        .-.+.+++++++++...++-.||+-++   ++|-   +.+=|+.+|+|.|=.-
T Consensus       241 ~g~l~l~~lPF~~Q~~yD~LLw~cD~NfV---RGED---SfVRAqwAgkPFvWhI  289 (374)
T PF10093_consen  241 RGNLTLHVLPFVPQDDYDRLLWACDFNFV---RGED---SFVRAQWAGKPFVWHI  289 (374)
T ss_pred             cCCeEEEECCCCCHHHHHHHHHhCccceE---ecch---HHHHHHHhCCCceEec
Confidence              146889999999999999999999776   6788   8899999999999653

The function is unknown.

>COG5017 Uncharacterized conserved protein [Function unknown]

Probab=90.34  E-value=2.8  Score=33.64  Aligned_cols=98  Identities=16%  Similarity=0.144  Sum_probs=59.4

Q ss_pred             EEEecccccccChHHHHHH--HHHHHhhCCCeEEE-EEeCCCcHHHHhhhcCcEEEecCCCHHHHHHHHHHcCEEEeCCC
Q 039338          314 LGVAGRLVKDKGHPLLHEA--FSKLMVKYPDVYLI-VAGSGPWEQRYKDFGHQVLVMGSMSPAELRAFYNAIDIFVNPTL  390 (493)
Q Consensus       314 i~~~Gr~~~~Kg~~~ll~a--~~~l~~~~~~~~l~-i~G~g~~~~~~~~l~~~V~~~g~~~~~~~~~~~~~adv~v~ps~  390 (493)
                      |+.+|.-  ..++..++.-  ...+.+.+ ..+++ =+|+|....    . ...+++|+--.+++..++..|.+++.  .
T Consensus         3 fVTvGst--f~~f~rlv~k~e~~el~~~i-~e~lIvQyGn~d~kp----v-agl~v~~F~~~~kiQsli~darIVIS--H   72 (161)
T COG5017           3 FVTVGST--FYPFNRLVLKIEVLELTELI-QEELIVQYGNGDIKP----V-AGLRVYGFDKEEKIQSLIHDARIVIS--H   72 (161)
T ss_pred             EEEecCc--cchHHHHHhhHHHHHHHHHh-hhheeeeecCCCccc----c-cccEEEeechHHHHHHHhhcceEEEe--c
Confidence            5567764  3344433322  22222222 23343 367765432    1 23678888878999999999998774  3


Q ss_pred             CCCCCChHHHHHHHcCCcEEecCCCCCccceeee
Q 039338          391 RPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVD  424 (493)
Q Consensus       391 ~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~  424 (493)
                      -++|   +++.++..++|.|......--.|++.+
T Consensus        73 aG~G---SIL~~~rl~kplIv~pr~s~y~elvDd  103 (161)
T COG5017          73 AGEG---SILLLLRLDKPLIVVPRSSQYQELVDD  103 (161)
T ss_pred             cCcc---hHHHHhhcCCcEEEEECchhHHHhhhh
Confidence            3456   899999999999887654422244433

>PLN02206 UDP-glucuronate decarboxylase

Probab=89.99  E-value=3.1  Score=41.82  Aligned_cols=35  Identities=26%  Similarity=0.324  Sum_probs=25.8

Q ss_pred             CCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEec
Q 039338           81 KFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTS  125 (493)
Q Consensus        81 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~  125 (493)
                      .+.|||++.          ||.+..=..|++.|.++|++|.++..
T Consensus       117 ~~~~kILVT----------GatGfIGs~Lv~~Ll~~G~~V~~ld~  151 (442)
T PLN02206        117 RKGLRVVVT----------GGAGFVGSHLVDRLMARGDSVIVVDN  151 (442)
T ss_pred             cCCCEEEEE----------CcccHHHHHHHHHHHHCcCEEEEEeC
Confidence            356898876          34444556689999999999998753

>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt

Probab=89.35  E-value=17  Score=33.23  Aligned_cols=56  Identities=23%  Similarity=0.362  Sum_probs=40.1

Q ss_pred             CcEEEecCCCHHHHHHHHHHc--CEEEe-CCCCCCCCChHHHHHHHcCCcEEecCCCCCc
Q 039338          362 HQVLVMGSMSPAELRAFYNAI--DIFVN-PTLRPQGLDLTLMEAMMSGKPVMASRFPSIK  418 (493)
Q Consensus       362 ~~V~~~g~~~~~~~~~~~~~a--dv~v~-ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~  418 (493)
                      +-|...|+.+.+.=.+++++.  |++|. -| ...|+.-++--|..+|+|||.-+-+..+
T Consensus       173 ~iia~~GPfs~e~n~al~~~~~i~~lVtK~S-G~~g~~eKi~AA~~lgi~vivI~RP~~~  231 (249)
T PF02571_consen  173 NIIAMQGPFSKELNRALFRQYGIDVLVTKES-GGSGFDEKIEAARELGIPVIVIKRPPEP  231 (249)
T ss_pred             hEEEEeCCCCHHHHHHHHHHcCCCEEEEcCC-CchhhHHHHHHHHHcCCeEEEEeCCCCC
Confidence            446677888877666777764  55554 22 2236778899999999999998876654

Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process

>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=88.20  E-value=0.75  Score=37.68  Aligned_cols=37  Identities=32%  Similarity=0.326  Sum_probs=28.6

Q ss_pred             EEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCC
Q 039338           86 IAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVD  128 (493)
Q Consensus        86 Il~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~  128 (493)
                      |++++.      ..+|.-.-...++++|.++||||.+.+....
T Consensus         1 Ili~~~------Gt~Ghv~P~lala~~L~~rGh~V~~~~~~~~   37 (139)
T PF03033_consen    1 ILIATG------GTRGHVYPFLALARALRRRGHEVRLATPPDF   37 (139)
T ss_dssp             EEEEEE------SSHHHHHHHHHHHHHHHHTT-EEEEEETGGG
T ss_pred             CEEEEc------CChhHHHHHHHHHHHHhccCCeEEEeecccc
Confidence            556664      5578888889999999999999998886543

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....

>PF01975 SurE: Survival protein SurE; InterPro: IPR002828 This entry represents a SurE-like structural domain with a 3-layer alpha/bete/alpha topology that bears some topological similarity to the N-terminal domain of the glutaminase/asparaginase family

Probab=87.56  E-value=0.87  Score=39.87  Aligned_cols=39  Identities=18%  Similarity=0.226  Sum_probs=30.1

Q ss_pred             eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCC
Q 039338           84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDN  129 (493)
Q Consensus        84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~  129 (493)
                      ||||+..+.     ..  ...-+..|+++|++.||+|+|+++....
T Consensus         1 M~ILlTNDD-----Gi--~a~Gi~aL~~~L~~~g~~V~VvAP~~~~   39 (196)
T PF01975_consen    1 MRILLTNDD-----GI--DAPGIRALAKALSALGHDVVVVAPDSEQ   39 (196)
T ss_dssp             SEEEEE-SS------T--TSHHHHHHHHHHTTTSSEEEEEEESSST
T ss_pred             CeEEEEcCC-----CC--CCHHHHHHHHHHHhcCCeEEEEeCCCCC
Confidence            899999874     22  2335888999998888999999998766

This domain is found in the stationary phase survival protein SurE, a metal ion-dependent phosphatase found in eubacteria, archaea and eukaryotes. In Escherichia coli, SurE also has activity as a nucleotidase and exopolyphosphatase, and may be involved in the stress response []. E. coli cells with mutations in the surE gene survive poorly in stationary phase []. The structure of SurE homologues have been determined from Thermotoga maritima [] and the archaea Pyrobaculum aerophilum []. The T. maritima SurE homologue has phosphatase activity that is inhibited by vanadate or tungstate, both of which bind adjacent to the divalent metal ion. This domain is found in acid phosphatases (3.1.3.2 from EC), 5'-nucleotidases (3.1.3.5 from EC), 3'-nucleotidases (3.1.3.6 from EC) and exopolyphosphatases (3.6.1.11 from EC).; GO: 0016787 hydrolase activity; PDB: 1L5X_B 2V4O_D 2V4N_A 2WQK_B 2E6G_G 2E69_D 2E6C_C 2E6B_D 2E6E_A 2E6H_A ....

>TIGR03837 efp_adjacent_2 conserved hypothetical protein, PP_1857 family

Probab=86.63  E-value=5.2  Score=38.28  Aligned_cols=102  Identities=20%  Similarity=0.249  Sum_probs=66.2

Q ss_pred             hhhhhhCCC--CCCcEEEEEecccccccChHHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhh--------------hc-
Q 039338          299 SFRSRIGIP--KNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKD--------------FG-  361 (493)
Q Consensus       299 ~~r~~~~i~--~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~--------------l~-  361 (493)
                      .+.+++|++  .+. .++..++  -+.-.+..++++++...   ..+++.|-.+ .....+..              .+ 
T Consensus       169 ~~~~~lg~~~~~~~-~~vSLF~--Ye~~al~~ll~~~~~~~---~pv~lLvp~G-r~~~~v~~~l~~~~~~~g~~~~~g~  241 (371)
T TIGR03837       169 ALLRRLGVGPEPDA-LLVSLFC--YENAALPALLDALAQSG---SPVHLLVPEG-RALAAVAAWLGDALLAAGDVHRRGA  241 (371)
T ss_pred             HHHHHcCCCCCCCC-eEEEEEe--cCChhHHHHHHHHHhCC---CCeEEEecCC-ccHHHHHHHhCccccCCccccccCc
Confidence            345567774  233 3332222  12344778888877543   3566666543 22222211              11 


Q ss_pred             CcEEEecCCCHHHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcCCcEEecC
Q 039338          362 HQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASR  413 (493)
Q Consensus       362 ~~V~~~g~~~~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~  413 (493)
                      -.+.+++++++++...++-.||+-++   ++|-   +.+=|..+|+|.|=--
T Consensus       242 L~~~~LPf~~Q~~yD~LLW~cD~NfV---RGED---SFVRAqWAgkPfvWhI  287 (371)
T TIGR03837       242 LTVAVLPFVPQDDYDRLLWACDLNFV---RGED---SFVRAQWAGKPFVWHI  287 (371)
T ss_pred             eEEEEcCCCChhhHHHHHHhChhcEe---echh---HHHHHHHcCCCceeec
Confidence            46888999999999999999999776   6788   8999999999998543

This model describes a conserved hypothetical protein that typically is encoded next to the gene efp for translation elongation factor P. The function is unknown.

>PF08660 Alg14: Oligosaccharide biosynthesis protein Alg14 like; InterPro: IPR013969 Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane []

Probab=86.37  E-value=1.8  Score=36.98  Aligned_cols=32  Identities=28%  Similarity=0.225  Sum_probs=24.4

Q ss_pred             CCCchHHHHHHHHHHH--HhCCCEEEEEecCCCC
Q 039338           98 TPGGMERHAHTLHVAL--ARRGHRVHIFTSPVDN  129 (493)
Q Consensus        98 ~~gG~~~~~~~l~~~L--~~~G~~V~v~~~~~~~  129 (493)
                      +.||+...+..|.+.+  ....++..+++..+..
T Consensus         6 gsGGHt~eml~L~~~~~~~~~~~~~~ivt~~d~~   39 (170)
T PF08660_consen    6 GSGGHTAEMLRLLKALDNDRYQPRTYIVTEGDKQ   39 (170)
T ss_pred             cCcHHHHHHHHHHHHhhhhcCCCcEEEEEcCCcc
Confidence            5599999999999999  2335677777766655

>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function

Probab=85.06  E-value=1.5  Score=33.51  Aligned_cols=45  Identities=18%  Similarity=0.098  Sum_probs=30.8

Q ss_pred             HHHHHHHHcCEEEeCCCCC--CCCChHHHHHHHcCCcEEecCCCCCc
Q 039338          374 ELRAFYNAIDIFVNPTLRP--QGLDLTLMEAMMSGKPVMASRFPSIK  418 (493)
Q Consensus       374 ~~~~~~~~adv~v~ps~~~--eg~~~~~~EAm~~G~PvI~s~~~~~~  418 (493)
                      .+...+..||++|+++..-  ...-.+--+|-..|+|++.++..+..
T Consensus        41 ~l~~~i~~aD~VIv~t~~vsH~~~~~vk~~akk~~ip~~~~~~~~~~   87 (97)
T PF10087_consen   41 RLPSKIKKADLVIVFTDYVSHNAMWKVKKAAKKYGIPIIYSRSRGVS   87 (97)
T ss_pred             HHHHhcCCCCEEEEEeCCcChHHHHHHHHHHHHcCCcEEEECCCCHH
Confidence            4899999999999977320  11223345567789999999865544

>PF02951 GSH-S_N: Prokaryotic glutathione synthetase, N-terminal domain; InterPro: IPR004215 Prokaryotic glutathione synthetase 6

Probab=83.98  E-value=1.7  Score=34.54  Aligned_cols=42  Identities=24%  Similarity=0.313  Sum_probs=26.4

Q ss_pred             eEEEEEeccCCCCC-CCCchHHHHHHHHHHHHhCCCEEEEEecCCCC
Q 039338           84 LKIAVFSRKWPIST-TPGGMERHAHTLHVALARRGHRVHIFTSPVDN  129 (493)
Q Consensus        84 mkIl~v~~~~p~~~-~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~  129 (493)
                      |||+|+....  .. ...+  .....|+.+..++||+|.++....-.
T Consensus         1 Mki~fvmDpi--~~i~~~k--DTT~alm~eAq~RGhev~~~~~~dL~   43 (119)
T PF02951_consen    1 MKIAFVMDPI--ESIKPYK--DTTFALMLEAQRRGHEVFYYEPGDLS   43 (119)
T ss_dssp             -EEEEEES-G--GG--TTT---HHHHHHHHHHHTT-EEEEE-GGGEE
T ss_pred             CeEEEEeCCH--HHCCCCC--ChHHHHHHHHHHCCCEEEEEEcCcEE
Confidence            8999999833  11 2222  24667888889999999999877644

3.2.3 from EC (glutathione synthase) catalyses the conversion of gamma-L-glutamyl-L-cysteine and glycine to orthophosphate and glutathione in the presence of ATP. This is the second step in glutathione biosynthesis. The enzyme is inhibited by 7,8-dihydrofolate, methotrexate and trimethoprim. This domain is the N terminus of the enzyme.; GO: 0004363 glutathione synthase activity, 0006750 glutathione biosynthetic process; PDB: 1GLV_A 1GSA_A 1GSH_A 2GLT_A.

>COG0496 SurE Predicted acid phosphatase [General function prediction only]

Probab=83.81  E-value=4.2  Score=36.79  Aligned_cols=38  Identities=18%  Similarity=0.254  Sum_probs=29.7

Q ss_pred             eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCC
Q 039338           84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDN  129 (493)
Q Consensus        84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~  129 (493)
                      ||||+-.+.       |=...-+..|+++|+ .++||+|+++..+.
T Consensus         1 mrILlTNDD-------Gi~a~Gi~aL~~al~-~~~dV~VVAP~~~q   38 (252)
T COG0496           1 MRILLTNDD-------GIHAPGIRALARALR-EGADVTVVAPDREQ   38 (252)
T ss_pred             CeEEEecCC-------ccCCHHHHHHHHHHh-hCCCEEEEccCCCC
Confidence            889988764       333344788999999 88999999998766

>PLN02778 3,5-epimerase/4-reductase

Probab=83.57  E-value=4.5  Score=38.23  Aligned_cols=34  Identities=18%  Similarity=0.174  Sum_probs=24.3

Q ss_pred             CCCCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEE
Q 039338           79 PSKFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHI  122 (493)
Q Consensus        79 ~~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v  122 (493)
                      +...+|||++..          |.+..=..|++.|.++||+|++
T Consensus         5 ~~~~~~kiLVtG----------~tGfiG~~l~~~L~~~g~~V~~   38 (298)
T PLN02778          5 AGSATLKFLIYG----------KTGWIGGLLGKLCQEQGIDFHY   38 (298)
T ss_pred             CCCCCCeEEEEC----------CCCHHHHHHHHHHHhCCCEEEE
Confidence            345579988773          3344455688999999999875

>PRK02261 methylaspartate mutase subunit S; Provisional

Probab=81.39  E-value=7.9  Score=31.70  Aligned_cols=61  Identities=13%  Similarity=0.040  Sum_probs=44.6

Q ss_pred             CCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCCCc
Q 039338           81 KFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEADK  160 (493)
Q Consensus        81 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (493)
                      ++++||++.+.      ...+...-...++..|...|++|+.+....+.                               
T Consensus         1 ~~~~~vl~~~~------~gD~H~lG~~iv~~~lr~~G~eVi~LG~~vp~-------------------------------   43 (137)
T PRK02261          1 MKKKTVVLGVI------GADCHAVGNKILDRALTEAGFEVINLGVMTSQ-------------------------------   43 (137)
T ss_pred             CCCCEEEEEeC------CCChhHHHHHHHHHHHHHCCCEEEECCCCCCH-------------------------------
Confidence            35678888875      33445555667788899999999988766554                               


Q ss_pred             cccccchHHHHHHhcCCCCcEEEeC
Q 039338          161 WRYSKGWEQFDEENQREPFDVVHSE  185 (493)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~DiI~~~  185 (493)
                             ..+.+...+.+||+|-+.
T Consensus        44 -------e~i~~~a~~~~~d~V~lS   61 (137)
T PRK02261         44 -------EEFIDAAIETDADAILVS   61 (137)
T ss_pred             -------HHHHHHHHHcCCCEEEEc
Confidence                   566666778899998765

>COG2120 Uncharacterized proteins, LmbE homologs [Function unknown]

Probab=81.35  E-value=9.8  Score=34.53  Aligned_cols=44  Identities=20%  Similarity=0.167  Sum_probs=31.1

Q ss_pred             CCCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCC
Q 039338           80 SKFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDN  129 (493)
Q Consensus        80 ~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~  129 (493)
                      .+..++|++|..+ |-+...|..+     ....+.++|++|.+++.....
T Consensus         7 ~~~~~~vL~v~aH-PDDe~~g~gg-----tla~~~~~G~~V~v~~lT~Ge   50 (237)
T COG2120           7 MLDPLRVLVVFAH-PDDEEIGCGG-----TLAKLAARGVEVTVVCLTLGE   50 (237)
T ss_pred             cccCCcEEEEecC-CcchhhccHH-----HHHHHHHCCCeEEEEEccCCc
Confidence            4557889999884 5544455444     334558899999999987766

>KOG1021 consensus Acetylglucosaminyltransferase EXT1/exostosin 1 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures]

Probab=81.23  E-value=9.6  Score=38.52  Aligned_cols=93  Identities=15%  Similarity=0.142  Sum_probs=61.4

Q ss_pred             HHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcCC-cEEecCCCCCcc-ceeeeCcceEEECC-CHHHHHHHHHHHHHc-
Q 039338          373 AELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGK-PVMASRFPSIKG-TIVVDDEFGFMFAP-NVESLHKTLEAAVSE-  448 (493)
Q Consensus       373 ~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G~-PvI~s~~~~~~~-e~v~~~~~G~~~~~-d~~~l~~~i~~ll~~-  448 (493)
                      ..+.+.++.+.+++.|.-. +...-.++||+..|| |||.++.--.+- +.+.-.+.+++++. ++..+   |.+.|.. 
T Consensus       335 ~~y~~~m~~S~FCL~p~Gd-~~ts~R~fdai~~gCvPViisd~~~lpf~~~~d~~~fSV~v~~~~v~~~---~~~iL~~i  410 (464)
T KOG1021|consen  335 LNYMEGMQDSKFCLCPPGD-TPTSPRLFDAIVSGCVPVIISDGIQLPFGDVLDWTEFSVFVPEKDVPEL---IKNILLSI  410 (464)
T ss_pred             chHHHHhhcCeEEECCCCC-CcccHhHHHHHHhCCccEEEcCCcccCcCCCccceEEEEEEEHHHhhhH---HHHHHHhc
Confidence            6888999999999999844 666779999999999 999998533332 33444566777764 44444   3333332 


Q ss_pred             CcHHHHHHHHHHHHHHHHhcC
Q 039338          449 GPMRLAQRGEACRQYAASMFT  469 (493)
Q Consensus       449 ~~~~~~~~~~~~~~~~~~~fs  469 (493)
                      +.++...|.++....+...|-
T Consensus       411 ~~~~~~~m~~~v~~~v~r~~~  431 (464)
T KOG1021|consen  411 PEEEVLRMRENVIRLVPRHFL  431 (464)
T ss_pred             CHHHHHHHHHHHHHHHHhhEE
Confidence            244556666666655555543

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=80.11  E-value=2.7  Score=35.85  Aligned_cols=36  Identities=22%  Similarity=0.379  Sum_probs=28.1

Q ss_pred             eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCC
Q 039338           84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDN  129 (493)
Q Consensus        84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~  129 (493)
                      |||++|...       |-++   ..+++...++||+|+.++.....
T Consensus         1 mKIaiIgAs-------G~~G---s~i~~EA~~RGHeVTAivRn~~K   36 (211)
T COG2910           1 MKIAIIGAS-------GKAG---SRILKEALKRGHEVTAIVRNASK   36 (211)
T ss_pred             CeEEEEecC-------chhH---HHHHHHHHhCCCeeEEEEeChHh
Confidence            899999863       3333   34778888999999999988766

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	493
3c4q_A	426	Structure Of The Retaining Glycosyltransferase Msha		7e-07
3c48_A	438	Structure Of The Retaining Glycosyltransferase Msha		1e-06
2gej_A	406	Crystal Structure Of Phosphatidylinositol Mannosylt		3e-06
3okc_A	394	Crystal Structure Of Corynebacterium Glutamicum Pim		1e-05
3oka_A	381	Crystal Structure Of Corynebacterium Glutamicum Pim		1e-05
2x6q_A	416	Crystal Structure Of Trehalose Synthase Tret From P		7e-04

>pdb|3C4Q|A Chain A, Structure Of The Retaining Glycosyltransferase Msha : The First Step In Mycothiol Biosynthesis. Organism : Corynebacterium Glutamicum- Complex With Udp Length = 426

Iteration: 1
 Score = 52.0 bits (123), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 82/359 (22%), Positives = 140/359 (38%), Gaps = 38/359 (10%)
Query: 92  KWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSN---NKY 148
           + P +   GGM  +  +    LA++G  V I+T          +   EN    N     Y
Sbjct: 14  QQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQGEIVRVAENLRVINIAAGPY 73
Query: 149 PLLHFHEGEADKWRYSKGWEQFDEENQREPFDVVHSES--VALPHWLARNVTNLAVSWHG 206
             L   E       ++ G   F    ++  +D++HS         WL R++  + +    
Sbjct: 74  EGLSKEELPTQLAAFTGGMLSF-TRREKVTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTA 132
Query: 207 IALESLQSGIFQDLTRKPLEPMSLAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEM 266
             L ++++    D      E   +   + +    +  +N         HH          
Sbjct: 133 HTLAAVKNSYRDDSDTPESEARRICEQQLVDNADVLAVNTQEEMQDLMHH---------- 182
Query: 267 LRDVYQIPSERVHVILNGINENEY--GVDLSLGQSFRSRIGIPKNASLVLGVAGRLVKDK 324
               Y    +R+ V+  G +   Y  G D +  +S R  +GIP +  +V  V GRL   K
Sbjct: 183 ----YDADPDRISVVSPGADVELYSPGNDRATERS-RRELGIPLHTKVVAFV-GRLQPFK 236
Query: 325 GHPLLHEAFSKLMVKYPD--VYLIVAG--SGP------WEQRYKDFG--HQVLVMGSMSP 372
           G  +L +A + L  + PD  + +I+ G  SGP      +    ++ G   ++  +    P
Sbjct: 237 GPQVLIKAVAALFDRDPDRNLRVIICGGPSGPNATPDTYRHMAEELGVEKRIRFLDPRPP 296
Query: 373 AELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMF 431
           +EL A Y A DI   P+   +   L  MEA  SG PV+A+R   +    V + E G + 
Sbjct: 297 SELVAVYRAADIVAVPSFN-ESFGLVAMEAQASGTPVIAARVGGLP-IAVAEGETGLLV 353

>pdb|3C48|A Chain A, Structure Of The Retaining Glycosyltransferase Msha: The First Step In Mycothiol Biosynthesis. Organism: Corynebacterium Glutamicum- Apo (Open) Structure. Length = 438

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 85/377 (22%), Positives = 147/377 (38%), Gaps = 43/377 (11%)
Query: 79  PSKFTLKIAVFSR-----KWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSP 133
           P    +++A+ S      + P +   GGM  +  +    LA++G  V I+T         
Sbjct: 16  PRGSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQGE 75
Query: 134 SISHQENDDGSN---NKYPLLHFHEGEADKWRYSKGWEQFDEENQREPFDVVHSES--VA 188
            +   EN    N     Y  L   E       ++ G   F    ++  +D++HS      
Sbjct: 76  IVRVAENLRVINIAAGPYEGLSKEELPTQLAAFTGGMLSF-TRREKVTYDLIHSHYWLSG 134
Query: 189 LPHWLARNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQGVMLKVLNEIR 248
              WL R++  + +      L ++++    D      E   +   + +    +  +N   
Sbjct: 135 QVGWLLRDLWRIPLIHTAHTLAAVKNSYRDDSDTPESEARRICEQQLVDNADVLAVNTQE 194
Query: 249 FFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEY--GVDLSLGQSFRSRIGI 306
                 HH              Y    +R+ V+  G +   Y  G D +  +S R  +GI
Sbjct: 195 EMQDLMHH--------------YDADPDRISVVSPGADVELYSPGNDRATERS-RRELGI 239
Query: 307 PKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPD--VYLIVAG--SGP------WEQR 356
           P +  +V  V GRL   KG  +L +A + L  + PD  + +I+ G  SGP      +   
Sbjct: 240 PLHTKVVAFV-GRLQPFKGPQVLIKAVAALFDRDPDRNLRVIICGGPSGPNATPDTYRHM 298
Query: 357 YKDFG--HQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRF 414
            ++ G   ++  +    P+EL A Y A DI   P+   +   L  MEA  SG PV+A+R 
Sbjct: 299 AEELGVEKRIRFLDPRPPSELVAVYRAADIVAVPSFN-ESFGLVAMEAQASGTPVIAARV 357
Query: 415 PSIKGTIVVDDEFGFMF 431
             +    V + E G + 
Sbjct: 358 GGLP-IAVAEGETGLLV 373

>pdb|2GEJ|A Chain A, Crystal Structure Of Phosphatidylinositol Mannosyltransferase (Pima) From Mycobacterium Smegmatis In Complex With Gdp-Man Length = 406

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/175 (21%), Positives = 77/175 (44%), Gaps = 6/175 (3%)
Query: 305 GIPKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWE---QRYKDFG 361
           G P+    VL +       KG  +L  A  KL+ ++PDV +++ G G  +   ++  D  
Sbjct: 203 GYPREGRTVLFLGRYDEPRKGMAVLLAALPKLVARFPDVEILIVGRGDEDELREQAGDLA 262
Query: 362 HQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTI 421
             +  +G +  A   +   + D++  P L  +   + L+EAM +G  V+AS   + +  +
Sbjct: 263 GHLRFLGQVDDATKASAMRSADVYCAPHLGGESFGIVLVEAMAAGTAVVASDLDAFRRVL 322
Query: 422 VVDDEFGFMFAPNVESLHKTLEAAVSEGPMR---LAQRGEACRQYAASMFTANKM 473
              D    +   + + +   L   + +  +R   +A+  E   +Y  S+ +A  M
Sbjct: 323 ADGDAGRLVPVDDADGMAAALIGILEDDQLRAGYVARASERVHRYDWSVVSAQIM 377

>pdb|3OKC|A Chain A, Crystal Structure Of Corynebacterium Glutamicum Pimb' Bound To Gdp (Orthorhombic Crystal Form) Length = 394

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 55/121 (45%), Gaps = 11/121 (9%)
Query: 301 RSRIGIPKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYK-- 358
           R ++G   + + V+    RLV  KG   L +A  +++   PD  L++ GSG +E   +  
Sbjct: 189 RKKLGF-TDTTPVIACNSRLVPRKGQDSLIKAMPQVIAARPDAQLLIVGSGRYESTLRRL 247
Query: 359 --DFGHQVLVMGSMSPAELRAFYNAIDIFVNPT------LRPQGLDLTLMEAMMSGKPVM 410
             D    V  +G +   ++     A DIF  P       L  +GL +  +EA   G PV+
Sbjct: 248 ATDVSQNVKFLGRLEYQDMINTLAAADIFAMPARTRGGGLDVEGLGIVYLEAQACGVPVI 307
Query: 411 A 411
           A
Sbjct: 308 A 308

>pdb|3OKA|A Chain A, Crystal Structure Of Corynebacterium Glutamicum Pimb' In Complex With Gdp-Man (Triclinic Crystal Form) Length = 381

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 55/121 (45%), Gaps = 11/121 (9%)
Query: 301 RSRIGIPKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYK-- 358
           R ++G   + + V+    RLV  KG   L +A  +++   PD  L++ GSG +E   +  
Sbjct: 189 RKKLGF-TDTTPVIACNSRLVPRKGQDSLIKAMPQVIAARPDAQLLIVGSGRYESTLRRL 247
Query: 359 --DFGHQVLVMGSMSPAELRAFYNAIDIFVNPT------LRPQGLDLTLMEAMMSGKPVM 410
             D    V  +G +   ++     A DIF  P       L  +GL +  +EA   G PV+
Sbjct: 248 ATDVSQNVKFLGRLEYQDMINTLAAADIFAMPARTRGGGLDVEGLGIVYLEAQACGVPVI 307
Query: 411 A 411
           A
Sbjct: 308 A 308

>pdb|2X6Q|A Chain A, Crystal Structure Of Trehalose Synthase Tret From P. Horikoshi Length = 416

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 60/126 (47%), Gaps = 16/126 (12%)
Query: 331 EAFSKLMVKYPDVYLIVAG----SGP-----WEQRYKDFG--HQVLVMGSM---SPAELR 376
           E + K+  K P V L++ G      P     +E+  +  G  + V V+ ++      E+ 
Sbjct: 251 EIYRKVKEKIPGVQLLLVGVMAHDDPEGWIYFEKTLRKIGEDYDVKVLTNLIGVHAREVN 310
Query: 377 AFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAPNVE 436
           AF  A D+ +  ++R +G  LT+ EAM  GKPV+      IK  I VD E GF+     E
Sbjct: 311 AFQRASDVILQMSIR-EGFGLTVTEAMWKGKPVIGRAVGGIKFQI-VDGETGFLVRDANE 368
Query: 437 SLHKTL 442
           ++   L
Sbjct: 369 AVEVVL 374

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	493
2iw1_A	374	Lipopolysaccharide core biosynthesis protein RFAG;	1e-49
2jjm_A	394	Glycosyl transferase, group 1 family protein; anth	2e-49
3okp_A	394	GDP-mannose-dependent alpha-(1-6)-phosphatidylino	6e-48
2gek_A	406	Phosphatidylinositol mannosyltransferase (PIMA); G	1e-42
2x6q_A	416	Trehalose-synthase TRET; biosynthetic protein; 2.2	5e-41
3c48_A	438	Predicted glycosyltransferases; retaining glycosyl	2e-40
2iuy_A	342	Avigt4, glycosyltransferase; antibiotics, family G	4e-31
2r60_A	499	Glycosyl transferase, group 1; rossmann-fold; 1.80	2e-30
2x0d_A	413	WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge	1e-24
3qhp_A	166	Type 1 capsular polysaccharide biosynthesis prote	2e-23
2f9f_A	177	First mannosyl transferase (WBAZ-1); alpha-beta pr	1e-21
3s28_A	816	Sucrose synthase 1; glycosyltransferase, sucrose m	8e-21
3oy2_A	413	Glycosyltransferase B736L; rossmann fold, GDP-mann	4e-20
2hy7_A	406	Glucuronosyltransferase GUMK; glycosyltransferases	5e-10
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-07
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-04
2bfw_A	200	GLGA glycogen synthase; glycosyltransferase family	2e-04
1rzu_A	485	Glycogen synthase 1; glycosyl-transferase, GT-B fo	3e-04

>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* Length = 374

 Score =  173 bits (440), Expect = 1e-49
 Identities = 62/414 (14%), Positives = 124/414 (29%), Gaps = 64/414 (15%)

Query: 85  KIAVFSRKWPISTTP-GGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDG 143
            +A    K+     P GG++R    +   +A RGH V ++T   +          +    
Sbjct: 2   IVAFCLYKYF----PFGGLQRDFMRIASTVAARGHHVRVYTQSWEG---------DCPKA 48

Query: 144 SNNKYPLLHFHEGEADKWRYSKGWEQF----DEENQREPFDVVHSESVALPH-WLARNVT 198
                      +             ++        +  P D V           +     
Sbjct: 49  -------FELIQVPVKSHTNHGRNAEYYAWVQNHLKEHPADRVVG------FNKMPGLDV 95

Query: 199 NLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQGVMLKVLNEIRFFNKYAHHVA 258
             A         + + G    LT +                            K    + 
Sbjct: 96  YFAADVCYAEKVAQEKGFLYRLTSRYR-------------HYAAFERATFEQGKSTKLMM 142

Query: 259 ISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLG--QSFRSRIGIPKNASLVLGV 316
           ++D      +  YQ   ER  ++  GI  +    +      + +R + GI +  +L+L V
Sbjct: 143 LTDKQIADFQKHYQTEPERFQILPPGIYPDRKYSEQIPNSREIYRQKNGIKEQQNLLLQV 202

Query: 317 AGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDF------GHQVLVMGSM 370
            G     KG     EA + L        L+        ++++           V      
Sbjct: 203 -GSDFGRKGVDRSIEALASLPESLRHNTLLFVVGQDKPRKFEALAEKLGVRSNVHFFSGR 261

Query: 371 SPAELRAFYNAIDIFVNPTLR-PQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGF 429
           +  ++     A D+ ++P  +   G  + L+EA+ +G PV+ +         + D   G 
Sbjct: 262 N--DVSELMAAADLLLHPAYQEAAG--IVLLEAITAGLPVLTTAVCGY-AHYIADANCGT 316

Query: 430 MFAP--NVESLHKTLEAAVSEGPMRLAQRGEACRQYAASMFTANKMALAYERLF 481
           + A   + E L++ L  A+++         E  R YA +      +      + 
Sbjct: 317 VIAEPFSQEQLNEVLRKALTQ-SPLRMAWAENARHYADT-QDLYSLPEKAADII 368

>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* Length = 394

 Score =  173 bits (441), Expect = 2e-49
 Identities = 80/420 (19%), Positives = 146/420 (34%), Gaps = 77/420 (18%)

Query: 85  KIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGS 144
           K+ +    +P   + GG       L   LA RGH +H  TS                   
Sbjct: 15  KLKIGITCYP---SVGGSGVVGTELGKQLAERGHEIHFITS-------------GLPFRL 58

Query: 145 NNKYPLLHFHEGEADKWRYSKGW-------EQFDEENQREPFDVVHSESVALPHWLAR-- 195
           N  YP ++FHE   +++   +          +  E  QRE  D++H    A+PH +    
Sbjct: 59  NKVYPNIYFHEVTVNQYSVFQYPPYDLALASKMAEVAQRENLDILHVHY-AIPHAICAYL 117

Query: 196 ------NVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQGVMLKVLNEIRF 249
                     +  + HG  +  L S    D +   L                      RF
Sbjct: 118 AKQMIGERIKIVTTLHGTDITVLGS----DPSLNNLI---------------------RF 152

Query: 250 FNKYAHHV-AISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPK 308
             + +  V A+S S      ++   P++ +  + N I+E  Y          +   GI +
Sbjct: 153 GIEQSDVVTAVSHSLINETHELV-KPNKDIQTVYNFIDERVYFKRDM--TQLKKEYGISE 209

Query: 309 NASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDF------GH 362
           +  +++ +     K K    + +AF+K+ V   D  L++ G GP                
Sbjct: 210 SEKILIHI-SNFRKVKRVQDVVQAFAKI-VTEVDAKLLLVGDGPEFCTILQLVKNLHIED 267

Query: 363 QVLVMGSMSPAELRAFYNAIDIFVNPTLR-PQGLDLTLMEAMMSGKPVMASRFPSIKGTI 421
           +VL +G      +       D+ +  + +   G  L L+EAM  G P + +R   I   +
Sbjct: 268 RVLFLGKQD--NVAELLAMSDLMLLLSEKESFG--LVLLEAMACGVPCIGTRVGGIP-EV 322

Query: 422 VVDDEFGFMFAP-NVESLHKTLEAAVSEGPMRLAQRGEACRQYAASMFTANKMALAYERL 480
           +   + G++    +   +       + +        GE  R+     F + K+   YE +
Sbjct: 323 IQHGDTGYLCEVGDTTGVADQAIQLLKD-EELHRNMGERARESVYEQFRSEKIVSQYETI 381

>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* Length = 394

 Score =  169 bits (430), Expect = 6e-48
 Identities = 64/416 (15%), Positives = 123/416 (29%), Gaps = 62/416 (14%)

Query: 84  LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDG 143
            K  V +  +P     GG++ +              V   T       +      +    
Sbjct: 5   RKTLVVTNDFP--PRIGGIQSYLRDFIATQDPESIVVFASTQN-----AEEAHAYDKTLD 57

Query: 144 SNNKYPLLHFHEGEA-DKWRYSKGWEQFDEENQREPFDVVHS---ESVALPHWLAR--NV 197
               Y ++ +           +    +          D V       +AL    A+    
Sbjct: 58  ----YEVIRWPRSVMLPTPTTAHAMAEIIR---EREIDNVWFGAAAPLALMAGTAKQAGA 110

Query: 198 TNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQGVMLKVLNEIRFFNKYAHHV 257
           + +  S HG  +        +   R                         +   +     
Sbjct: 111 SKVIASTHGHEVGWSMLPGSRQSLR-------------------------KIGTEVDVLT 145

Query: 258 AISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSL-GQSFRSRIGIPKNASLVLGV 316
            IS       +  +         + +G++   +         + R ++G      ++   
Sbjct: 146 YISQYTLRRFKSAF-GSHPTFEHLPSGVDVKRFTPATPEDKSATRKKLGFTDTTPVIACN 204

Query: 317 AGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYK----DFGHQVLVMGSMSP 372
             RLV  KG   L +A  +++   PD  L++ GSG +E   +    D    V  +G +  
Sbjct: 205 -SRLVPRKGQDSLIKAMPQVIAARPDAQLLIVGSGRYESTLRRLATDVSQNVKFLGRLEY 263

Query: 373 AELRAFYNAIDIFVNPTLRPQ------GLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDE 426
            ++     A DIF  P           GL +  +EA   G PV+A           V   
Sbjct: 264 QDMINTLAAADIFAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSGGAP--ETVTPA 321

Query: 427 FGFMFAP-NVESLHKTLEAAVSEGPMRLAQRGEACRQYAASMFTANKMALAYERLF 481
            G +    +V+ L + L   + + P+R A  G A R +  + ++   M      + 
Sbjct: 322 TGLVVEGSDVDKLSELLIELLDD-PIRRAAMGAAGRAHVEAEWSWEIMGERLTNIL 376

>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* Length = 406

 Score =  155 bits (393), Expect = 1e-42
 Identities = 73/408 (17%), Positives = 142/408 (34%), Gaps = 60/408 (14%)

Query: 84  LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDG 143
           ++I +          PGG++ H   L   L   GH V +          P+  H +  D 
Sbjct: 21  MRIGMVCPYSF--DVPGGVQSHVLQLAEVLRDAGHEVSVLA--------PASPHVKLPDY 70

Query: 144 SNNKYPLLHF-HEGEADKWRYS-KGWEQFDEENQREPFDVVHS--ESVALPHWLARNVTN 199
             +    +   + G   + R+      +  +      FDV+H    +      LA     
Sbjct: 71  VVSGGKAVPIPYNGSVARLRFGPATHRKVKKWIAEGDFDVLHIHEPNAPSLSMLALQAAE 130

Query: 200 LAV--SWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQGVMLKVLNEIRFFNKYAHHV 257
             +  ++H    +SL   +FQ + R                          +  K    +
Sbjct: 131 GPIVATFHTSTTKSLTLSVFQGILR-------------------------PYHEKIIGRI 165

Query: 258 AISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVA 317
           A+SD      R   +        I NG       VD++         G P+    VL + 
Sbjct: 166 AVSDL---ARRWQMEALGSDAVEIPNG-------VDVASFADAPLLDGYPREGRTVLFL- 214

Query: 318 GRLVKD-KGHPLLHEAFSKLMVKYPDVYLIVAGSGP---WEQRYKDFGHQVLVMGSMSPA 373
           GR  +  KG  +L  A  KL+ ++PDV +++ G G      ++  D    +  +G +  A
Sbjct: 215 GRYDEPRKGMAVLLAALPKLVARFPDVEILIVGRGDEDELREQAGDLAGHLRFLGQVDDA 274

Query: 374 ELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAP 433
              +   + D++  P L  +   + L+EAM +G  V+AS   +    ++ D + G +   
Sbjct: 275 TKASAMRSADVYCAPHLGGESFGIVLVEAMAAGTAVVASDLDAF-RRVLADGDAGRLVPV 333

Query: 434 -NVESLHKTLEAAVSEGPMRLAQRGEACRQYAASMFTANKMALAYERL 480
            + + +   L   + +     A       +     +  + ++    R+
Sbjct: 334 DDADGMAAALIGILED-DQLRAGYVARASERVHR-YDWSVVSAQIMRV 379

>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* Length = 416

 Score =  151 bits (382), Expect = 5e-41
 Identities = 76/412 (18%), Positives = 130/412 (31%), Gaps = 71/412 (17%)

Query: 95  ISTTP--GGMERHAHTLHVALARRGHRVHIFT--SPVDNINSPSISHQENDDGSNNKYPL 150
           +++T   GG+    H+L   L   G     F    P +  N     H       + K   
Sbjct: 46  VNSTSFGGGVAEILHSLVPLLRSIGIEARWFVIEGPTEFFNVTKTFHNALQGNESLKLT- 104

Query: 151 LHFHEGEADKWRYSKGWEQFDEENQREPFDVVHSESVALPHWLARNVTN---LAVSWHGI 207
                 E  K  Y     +  +      FD V       P  L              H I
Sbjct: 105 ------EEMKELYLNVNRENSKFIDLSSFDYVLVHD-PQPAALIEFYEKKSPWLWRCH-I 156

Query: 208 ALESLQSGIFQDLTRKPLEPMSLAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEML 267
            L S     ++ L R                          F  KY  ++       E +
Sbjct: 157 DLSSPNREFWEFLRR--------------------------FVEKYDRYIF---HLPEYV 187

Query: 268 RDVYQIPSERVHVILNGIN---ENEYGVDLSLGQSFRSRIGIPKNASLVLGVAGRLVKDK 324
           +   ++   +  ++   I+   E    +  +       R  +     ++  V  R    K
Sbjct: 188 QP--ELDRNKAVIMPPSIDPLSEKNVELKQTEILRILERFDVDPEKPIITQV-SRFDPWK 244

Query: 325 GHPLLHEAFSKLMVKYPDVYLIVAGSGPW-------------EQRYKDFGHQVLVM--GS 369
           G   + E + K+  K P V L++ G                  +  +D+  +VL    G 
Sbjct: 245 GIFDVIEIYRKVKEKIPGVQLLLVGVMAHDDPEGWIYFEKTLRKIGEDYDVKVLTNLIG- 303

Query: 370 MSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGF 429
           +   E+ AF  A D+ +  ++R +G  LT+ EAM  GKPV+      IK   +VD E GF
Sbjct: 304 VHAREVNAFQRASDVILQMSIR-EGFGLTVTEAMWKGKPVIGRAVGGIK-FQIVDGETGF 361

Query: 430 MFAPNVESLHKTLEAAVSEGPMRLAQRGEACRQYAASMFTANKMALAYERLF 481
           +   +     + +   +   P    + G   ++     F   K    Y  + 
Sbjct: 362 LV-RDANEAVEVVLYLLKH-PEVSKEMGAKAKERVRKNFIITKHMERYLDIL 411

>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* Length = 438

 Score =  150 bits (380), Expect = 2e-40
 Identities = 88/452 (19%), Positives = 155/452 (34%), Gaps = 92/452 (20%)

Query: 79  PSKFTLKIAVFSRKWPISTTP-----GGMERHAHTLHVALARRGHRVHIFTSPVDNINSP 133
           P    +++A+ S        P     GGM  +  +    LA++G  V I+T         
Sbjct: 16  PRGSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQGE 75

Query: 134 SISHQENDDGSNNKYPLLHFHEGEADKWRYSKGWEQFDE---------ENQREPFDVVHS 184
            +   EN         +++   G  +     +   Q              ++  +D++HS
Sbjct: 76  IVRVAEN-------LRVINIAAGPYEGLSKEELPTQLAAFTGGMLSFTRREKVTYDLIHS 128

Query: 185 ESVALPH-WLARNVTNLAVSWHGI-------ALES------LQSGIFQDLTRKPLEPMSL 230
                 H WL+  V  L      I        L +        S   +   R+  E   +
Sbjct: 129 ------HYWLSGQVGWLLRDLWRIPLIHTAHTLAAVKNSYRDDSDTPESEARRICEQQLV 182

Query: 231 AFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDV---YQIPSERVHVILNGINE 287
                                  A  +A++    E ++D+   Y    +R+ V+  G + 
Sbjct: 183 D---------------------NADVLAVN--TQEEMQDLMHHYDADPDRISVVSPGADV 219

Query: 288 NEYGVDLSLG-QSFRSRIGIPKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLI 346
             Y        +  R  +GIP +  +V    GRL   KG  +L +A + L  + PD  L 
Sbjct: 220 ELYSPGNDRATERSRRELGIPLHTKVVA-FVGRLQPFKGPQVLIKAVAALFDRDPDRNLR 278

Query: 347 V------AGSGPWEQRYKDF------GHQVLVMGSMSPAELRAFYNAIDIFVNPTLR-PQ 393
           V      +G       Y+          ++  +    P+EL A Y A DI   P+     
Sbjct: 279 VIICGGPSGPNATPDTYRHMAEELGVEKRIRFLDPRPPSELVAVYRAADIVAVPSFNESF 338

Query: 394 GLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAP-NVESLHKTLEAAVSEGPMR 452
           G  L  MEA  SG PV+A+R   +    V + E G +    +  +    L   + +    
Sbjct: 339 G--LVAMEAQASGTPVIAARVGGLP-IAVAEGETGLLVDGHSPHAWADALATLLDD-DET 394

Query: 453 LAQRGEACRQYAASMFT----ANKMALAYERL 480
             + GE   ++A + F+    A +++  Y   
Sbjct: 395 RIRMGEDAVEHART-FSWAATAAQLSSLYNDA 425

>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* Length = 342

 Score =  122 bits (307), Expect = 4e-31
 Identities = 50/395 (12%), Positives = 100/395 (25%), Gaps = 105/395 (26%)

Query: 100 GGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEAD 159
           GG++     L   L   GH V +  +P                GS    P L        
Sbjct: 30  GGIQWVVANLMDGLLELGHEVFLLGAP----------------GSPAGRPGLTVVPAGE- 72

Query: 160 KWRYSKGWEQFDEENQREPFDVVHSESVALPHWLARNVTNLAVSWHGIALESLQSGIFQD 219
                   E+ +   +    DVVH  S  +            +S H              
Sbjct: 73  -------PEEIERWLRTADVDVVHDHSGGVIGPAGLPPGTAFISSHHFTTR--------- 116

Query: 220 LTRKPLEPMSLAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVH 279
               P+ P+   +                           S +     +  +    +   
Sbjct: 117 ----PVNPVGCTY--------------------------SSRA-----QRAHCGGGDDAP 141

Query: 280 VILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVK 339
           VI   ++   Y           +     ++    L   GR+   KG              
Sbjct: 142 VIPIPVDPARY--------RSAADQVAKED---FLLFMGRVSPHKGALEAAAF-----AH 185

Query: 340 YPDVYLIVAGSGP----WEQRYKDFGHQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGL 395
                L++AG       +++  + +G  V  +G +          +    +  +    G 
Sbjct: 186 ACGRRLVLAGPAWEPEYFDEITRRYGSTVEPIGEVGGERRLDLLASAHAVLAMSQAVTGP 245

Query: 396 D---------LTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAPNVESLHKTLEAAV 446
                       + EA +SG PV+ +    +   +      G +     +         +
Sbjct: 246 WGGIWCEPGATVVSEAAVSGTPVVGTGNGCLAEIV---PSVGEVVGYGTDFAPDEARRTL 302

Query: 447 SEGPMRLAQRGEACRQYAASMFTANKMALAYERLF 481
           +  P       +  R+ A  ++    +A  Y   +
Sbjct: 303 AGLP-----ASDEVRRAAVRLWGHVTIAERYVEQY 332

>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* Length = 499

 Score =  122 bits (309), Expect = 2e-30
 Identities = 71/448 (15%), Positives = 136/448 (30%), Gaps = 88/448 (19%)

Query: 100 GGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEAD 159
           GG   +   + +ALA  G +V I T  + + N P  S + +     NK  ++    G   
Sbjct: 33  GGQLVYVKEVSLALAEMGVQVDIITRRIKDENWPEFSGEIDYYQETNKVRIVRIPFGGDK 92

Query: 160 KWRYSKGWEQFDE---------ENQREPFDVVHSESVALPH-WLARNVTNLAVSWHGI-- 207
                + W    E           + +   VV +      H         L  +  G+  
Sbjct: 93  FLPKEELWPYLHEYVNKIINFYREEGKFPQVVTT------HYGDGGLAGVLLKNIKGLPF 146

Query: 208 -----ALES--LQSGIFQDLTRKPLEPMSLAFNKSLQGVMLKVLNEIRFFNKYAHHVAIS 260
                +L +  ++         K ++     F++ +    L +         YA  + +S
Sbjct: 147 TFTGHSLGAQKMEKLNVNTSNFKEMDE-RFKFHRRIIAERLTM--------SYADKIIVS 197

Query: 261 DSCGEMLRDVY----------QIPSERVHVILNGINENEY------GVDLSLGQSFRSRI 304
               +     Y              ++  VI  G+N   +       +   + +     +
Sbjct: 198 --TSQERFGQYSHDLYRGAVNVEDDDKFSVIPPGVNTRVFDGEYGDKIKAKITKYLERDL 255

Query: 305 GIPKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYK------ 358
           G  +     +  + RL + K H  L EA+ +         L++   G             
Sbjct: 256 GSERMELPAIIASSRLDQKKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQ 315

Query: 359 ----------------DFGHQVLVMGSMSPAELRAFYNAI----DIFVNPTL-RPQGLDL 397
                           D   +V +    S  EL   Y  +     +F   +   P GL  
Sbjct: 316 EEKEILGKIIELIDNNDCRGKVSMFPLNSQQELAGCYAYLASKGSVFALTSFYEPFGL-- 373

Query: 398 TLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAP-NVESLHKTLEAAVSEGPMRLAQR 456
             +EAM SG P + +R       I+   ++G +  P + E + + L  A        +  
Sbjct: 374 APVEAMASGLPAVVTRNGGPA-EILDGGKYGVLVDPEDPEDIARGLLKAFES-EETWSAY 431

Query: 457 GEACRQYAASMFT----ANKMALAYERL 480
            E  +Q     +T    A       + +
Sbjct: 432 QEKGKQRVEERYTWQETARGYLEVIQEI 459

>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* Length = 413

 Score =  104 bits (261), Expect = 1e-24
 Identities = 43/409 (10%), Positives = 100/409 (24%), Gaps = 56/409 (13%)

Query: 85  KIAVFSRKWPISTTPGGME---RHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQEND 141
           ++ +           GG+    +           +  +  I             +    D
Sbjct: 48  RLNLLVPSINQEHMFGGISTALKLFE----QFDNKKFKKRIIL--------TDATPNPKD 95

Query: 142 DGSNNKYPLLHFHEGEADKWRYSKGWEQFDEENQREPFDVVHSESVALPHWLARNVTNLA 201
             S   +  +   E +    +     ++++        D+      A   W A     + 
Sbjct: 96  LQSFKSFKYVMPEEDKDFALQIVPFNDRYNRTIPVAKHDIFI----ATAWWTAYAAQRIV 151

Query: 202 VSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQGVMLKVLNEIRFFNKYAHHVA-IS 260
                                 P   +         G        +   + Y +    I+
Sbjct: 152 SWQSDTY-------------GIPPNKILYIIQDFEPGFYQWSSQYVLAESTYKYRGPQIA 198

Query: 261 DSCGEMLRDVYQ---IPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVA 317
               E+L+  +          +     IN                     +   ++L   
Sbjct: 199 VFNSELLKQYFNNKGYNFTDEYFFQPKINTTL----------KNYINDKRQKEKIILVYG 248

Query: 318 GRLVKDKGHPLLHEAFSKLMVKY---PDVYLIVAGSGPWEQRYKDFGHQVLVMGSMSPAE 374
              VK     L+ EA    + KY    +  +I  G    +      G  +  +G ++  +
Sbjct: 249 RPSVKRNAFTLIVEALKIFVQKYDRSNEWKIISVGEK-HKDIALGKGIHLNSLGKLTLED 307

Query: 375 LRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAP- 433
                    I ++  + P       +E    G  V+ +++ +    +             
Sbjct: 308 YADLLKRSSIGISLMISP-HPSYPPLEMAHFGLRVITNKYENKD--LSNWHSNIVSLEQL 364

Query: 434 NVESLHKTLEAAVSEGPMR--LAQRGEACRQYAASMFTANKMALAYERL 480
           N E++ +TL         R    +       Y       + +    E+L
Sbjct: 365 NPENIAETLVELCMSFNNRDVDKKESSNMMFYINEFNEFSFIKEIEEKL 413

>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} Length = 166

 Score = 96.1 bits (240), Expect = 2e-23
 Identities = 30/169 (17%), Positives = 62/169 (36%), Gaps = 13/169 (7%)

Query: 312 LVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYK----DFGHQVLVM 367
             + + GR   +K   +L +A +       D+ L++ G GP E++ K      G +    
Sbjct: 3   FKIAMVGRYSNEKNQSVLIKAVALS-KYKQDIVLLLKGKGPDEKKIKLLAQKLGVKAEF- 60

Query: 368 GSMSPAELRAFYNAIDIFVNPTLR-PQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDE 426
           G ++  EL        ++V+      +   +  +EA+  G   + +  P         DE
Sbjct: 61  GFVNSNELLEILKTCTLYVHAANVESEA--IACLEAISVGIVPVIANSPLSATRQFALDE 118

Query: 427 FGFMFAP-NVESLHKTLEAAVSEGPMRLAQRGEACRQYAASMFTANKMA 474
              +F P N + L   ++  +     R  +      + A + +T     
Sbjct: 119 -RSLFEPNNAKDLSAKIDWWLENKLER-ERMQNEYAKSALN-YTLENSV 164

>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 Length = 177

 Score = 90.7 bits (226), Expect = 1e-21
 Identities = 36/158 (22%), Positives = 60/158 (37%), Gaps = 20/158 (12%)

Query: 317 AGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDF--------GHQVLVMG 368
             R+  +K   L  E F KL     D  L + G        + +           V  +G
Sbjct: 29  VNRIYPEKRIELQLEVFKKL----QDEKLYIVGWFSKGDHAERYARKIMKIAPDNVKFLG 84

Query: 369 SMSPAELRAFYNAIDIFVNPTLR-PQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEF 427
           S+S  EL   Y+     +        GL  T +EAM SGKPV+A      K T V++++ 
Sbjct: 85  SVSEEELIDLYSRCKGLLCTAKDEDFGL--TPIEAMASGKPVIAVNEGGFKET-VINEKT 141

Query: 428 GFMFAPNVESLHKTLEAAVSEGPMRLAQRGEACRQYAA 465
           G++   +V  +   ++           +  + C + A 
Sbjct: 142 GYLVNADVNEIIDAMKKVSKNP----DKFKKDCFRRAK 175

>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* Length = 816

 Score = 95.0 bits (236), Expect = 8e-21
 Identities = 69/519 (13%), Positives = 136/519 (26%), Gaps = 110/519 (21%)

Query: 61  DLRNAEFAWNLLSFLQNQPSKFTLKIAVFSRKWPISTTP--GGMERHAHTLHV-----AL 113
           DL  A     L +FL   P  F   + + S     +     G  +     +++     AL
Sbjct: 258 DLLEAPDPCTLETFLGRVPMVF--NVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRAL 315

Query: 114 ARR------------GHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHF----HEGE 157
                            R+ I T  + +    +   +      +    +L       +G 
Sbjct: 316 EIEMLQRIKQQGLNIKPRILILTRLLPDAVGTTCGERLERVYDSEYCDILRVPFRTEKGI 375

Query: 158 ADKW-----------RYSKGWEQFDEENQREPFDVVHSESVALPHWLA---------RNV 197
             KW            Y++       +      D++        +            +  
Sbjct: 376 VRKWISRFEVWPYLETYTEDAAVELSKELNGKPDLIIGN-----YSDGNLVASLLAHKLG 430

Query: 198 TNLAVSWHGIA-LESLQSGIFQDLTRKPLEPMS------LAFNKSLQGV---MLKVLNEI 247
                  H +   +   S I+                   A N +   +     ++    
Sbjct: 431 VTQCTIAHALEKTKYPDSDIYWKKLDDKYHFSCQFTADIFAMNHTDFIITSTFQEIAGSK 490

Query: 248 RFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEY---------------GV 292
               +Y  H A +      +     +   + +++  G + + Y                +
Sbjct: 491 ETVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLTKFHSEI 550

Query: 293 DLSLGQSFRS----RIGIPKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVA 348
           +  L     +     +   K   ++  +  RL + K    L E + K         L+V 
Sbjct: 551 EELLYSDVENKEHLCVLKDKKKPILFTM-ARLDRVKNLSGLVEWYGKNTRLRELANLVVV 609

Query: 349 GSGPWEQ-----------------RYKDFGHQVLVMGSMSPAE-----LRAFYNAIDIFV 386
           G    ++                        Q   + S           R   +    FV
Sbjct: 610 GGDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWISSQMDRVRNGELYRYICDTKGAFV 669

Query: 387 NPTLR-PQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAP-NVESLHKTLEA 444
            P L    G  LT++EAM  G P  A+        I+V  + GF   P + +    TL  
Sbjct: 670 QPALYEAFG--LTVVEAMTCGLPTFATCKGGPA-EIIVHGKSGFHIDPYHGDQAADTLAD 726

Query: 445 AVSEG---PMRLAQRGEACRQYAASMFTANKMALAYERL 480
             ++    P    +  +   Q     +T    +     L
Sbjct: 727 FFTKCKEDPSHWDEISKGGLQRIEEKYTWQIYSQRLLTL 765

>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* Length = 413

 Score = 91.4 bits (226), Expect = 4e-20
 Identities = 48/436 (11%), Positives = 118/436 (27%), Gaps = 89/436 (20%)

Query: 85  KIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGS 144
           K+ +       S+ P G  R    +   +++  H V +F            ++ E  D  
Sbjct: 2   KLIIVGAH---SSVPSGYGRVMRAIVPRISK-AHEVIVFGIH--AFGRSVHANIEEFDAQ 55

Query: 145 NNKYPLLHFHEGEADKWRYSKGWEQFDEENQREPFDVVHSESVALPHWLARNVTNLAVSW 204
             ++      +G          +    E       D+V       P  +           
Sbjct: 56  TAEHVRGLNEQG--------FYYSGLSEFIDVHKPDIVMI--YNDPIVIGNY-------L 98

Query: 205 HGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCG 264
             +   S ++ I   +           +                   K    +A+S    
Sbjct: 99  LAMGKCSHRTKIVLYVDLVSKNIRENLWWI-------------FSHPKVVGVMAMSKCWI 145

Query: 265 EMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNA-SLVLGVAGRLVKD 323
             + +        ++++ + ++              R  +G+ +    ++     R    
Sbjct: 146 SDICNYG--CKVPINIVSHFVDTKTI-------YDARKLVGLSEYNDDVLFLNMNRNTAR 196

Query: 324 KGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDFGHQ-------------------V 364
           K   +   A ++ + KYPD  +    +   E ++                         +
Sbjct: 197 KRLDIYVLAAARFISKYPDAKVRFLCNSHHESKFDLHSIALRELVASGVDNVFTHLNKIM 256

Query: 365 LVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVD 424
           +    ++   +   YNA D+ VN +   +G  L   E  + GKP++ S            
Sbjct: 257 INRTVLTDERVDMMYNACDVIVNCS-SGEGFGLCSAEGAVLGKPLIISAVGGADD--YFS 313

Query: 425 DEFGFM-------------------FAPNVESLHKTLEAAVSEGPMRLAQRGEACRQYAA 465
            +  +                       +V+ L +       +      + G+  + +  
Sbjct: 314 GDCVYKIKPSAWISVDDRDGIGGIEGIIDVDDLVEAFTFF--KDEKNRKEYGKRVQDFVK 371

Query: 466 SMFTANKMALAYERLF 481
           +  T + ++      F
Sbjct: 372 TKPTWDDISSDIIDFF 387

>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A* Length = 406

 Score = 60.5 bits (146), Expect = 5e-10
 Identities = 49/371 (13%), Positives = 91/371 (24%), Gaps = 65/371 (17%)

Query: 107 HTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEADKWRYSKG 166
           H +   LA RG              S   S                  +        +  
Sbjct: 34  HFITDQLALRGTTRFF---------SLRYS-----------RLSRMKGDMRLPLDDTANT 73

Query: 167 WEQFDEENQREPFDVVHSESVALPHWLARNVTNLAVSWHGIALESLQSGIFQD---LTRK 223
               +  +       VH  +     WL      +   +     + L   + +    +   
Sbjct: 74  VVSHNGVDCYLWRTTVHPFNTRRS-WLRPVEDAMFRWYAAHPPKQLLDWMRESDVIVFES 132

Query: 224 PLEPMSLAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQI---------- 273
            +    +   K +      V       +       I      +   +  I          
Sbjct: 133 GIAVAFIELAKRVNPAAKLVYRASDGLSTINVASYIEREFDRVAPTLDVIALVSPAMAAE 192

Query: 274 --PSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVAGRLVKDKGHPLLHE 331
               + V  + +G       VD +L    +     P    +     G ++ D       E
Sbjct: 193 VVSRDNVFHVGHG-------VDHNL---DQLGDPSPYAEGIHAVAVGSMLFD------PE 236

Query: 332 AFSKLMVKYPDVYLIVAGSGPWEQRYKDFGHQVLVMGSMSPAELRAFYNAIDIFVNPTLR 391
            F      +P V   V GSG    R+  +G  V+V G M  A+   +       + P   
Sbjct: 237 FFVVASKAFPQVTFHVIGSG--MGRHPGYGDNVIVYGEMKHAQTIGYIKHARFGIAPYAS 294

Query: 392 PQGLD------LTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAPNVESLHKTLEAA 445
            Q         + L++    G P +                       N +S+   +  A
Sbjct: 295 EQVPVYLADSSMKLLQYDFFGLPAVCPNAVVGPYKSRF-----GYTPGNADSVIAAITQA 349

Query: 446 VSEGPMRLAQR 456
           +    +R  Q 
Sbjct: 350 LEAPRVRYRQC 360

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 52.2 bits (124), Expect = 4e-07
 Identities = 52/384 (13%), Positives = 104/384 (27%), Gaps = 155/384 (40%)

Query: 122 IFTSP-VDNI-NSPS------------ISHQEN------DDGSNNKYPLLHFHEGEADKW 161
           I +   +D+I  S              +S QE       ++     Y  L          
Sbjct: 45  ILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFL------MSPI 98

Query: 162 RY-----SKGWEQFDEENQR--------EPFDVVHSESV-ALPHWL--ARNVTNLAVSWH 205
           +      S     + E+  R          ++V   +    L   L   R   N+ +   
Sbjct: 99  KTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLI--D 156

Query: 206 G--------IALESLQS---------GIF-----------------QDLTRKPLEPMSLA 231
           G        +AL+   S          IF                 Q L  + ++P   +
Sbjct: 157 GVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQ-IDPNWTS 215

Query: 232 FNKSLQGVMLKVLNEI-----RFF--NKYAHHVAISD-------------SCGEML---R 268
            +     + L+ ++ I     R      Y + + +               SC ++L   R
Sbjct: 216 RSDHSSNIKLR-IHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSC-KILLTTR 273

Query: 269 DV----YQIPSERVHVILN----GINENEYGVDLSLGQSFRSRIGI-----PKNASLVLG 315
                 +   +   H+ L+     +  +E     SL       +       P+       
Sbjct: 274 FKQVTDFLSAATTTHISLDHHSMTLTPDE---VKSL---LLKYLDCRPQDLPREVL---- 323

Query: 316 VAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDFGHQVL--VMGS---- 369
                     +P      ++ +               W+  +K      L  ++ S    
Sbjct: 324 --------TTNPRRLSIIAESIRDGLAT---------WD-NWKHVNCDKLTTIIESSLNV 365

Query: 370 MSPAELRAFYNAIDIF---VN-PT 389
           + PAE R  ++ + +F    + PT
Sbjct: 366 LEPAEYRKMFDRLSVFPPSAHIPT 389

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 43.7 bits (102), Expect = 1e-04
 Identities = 72/506 (14%), Positives = 136/506 (26%), Gaps = 172/506 (33%)

Query: 28  IFTIPALFLLHTPTNLICPNLATNHNVNKPWSGDLRNAEFAWNLLSFLQNQPSKFTLK-I 86
           +F      LL     ++   +     +N  +           + +   Q QPS  T   I
Sbjct: 67  LFWT----LLSKQEEMVQKFVEEVLRINYKF---------LMSPIKTEQRQPSMMTRMYI 113

Query: 87  AVFSRKW--PISTTPGGMERHAH-----------------TLH----------VALARRG 117
               R +          + R                     +                  
Sbjct: 114 EQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLS 173

Query: 118 HRVH------IFTSPVDNINSPS--ISHQENDDGSNNKYPLLHFHEGEADKWRYSKGWEQ 169
           ++V       IF   + N NSP   +   +          LL+         +    W  
Sbjct: 174 YKVQCKMDFKIFWLNLKNCNSPETVLEMLQK---------LLY---------QIDPNWTS 215

Query: 170 FDEENQREPFDVVHSESVALPHWLA-----------RNVTNLAVSWHGIALESL------ 212
             + +       +HS    L   L             NV       +  A  +       
Sbjct: 216 RSDHSSNIKLR-IHSIQAELRRLLKSKPYENCLLVLLNV------QNAKAWNAFNLSCKI 268

Query: 213 -----QSGIFQDL-----TRKPLEPMSLAFNKS-LQGVMLKVLNEIRFFN-----KYAHH 256
                   +   L     T   L+  S+      ++ ++LK L+  R  +        + 
Sbjct: 269 LLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLD-CRPQDLPREVLTTNP 327

Query: 257 VAISDSCGEMLRDVY-------QIPSERVHVI----LNGINENEYG---VDLSLGQSFRS 302
             +S    E +RD          +  +++  I    LN +   EY      LS+   F  
Sbjct: 328 RRLS-IIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSV---FPP 383

Query: 303 RIGIPKNASLVLGVA-GRLVKDKGHPLLHEAFSKLMVK---------YPDVYLIVAGSGP 352
              IP   +++L +    ++K     ++++     +V+          P +YL +     
Sbjct: 384 SAHIP---TILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLE 440

Query: 353 WEQRYKDFGHQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLD------LT--LMEAMM 404
            E       H+ +V            YN    F +  L P  LD      +   L     
Sbjct: 441 NEYAL----HRSIV----------DHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEH 486

Query: 405 SGKPVMASRFPSIKGTIVVDDEFGFM 430
             +    + F      + +D  F F+
Sbjct: 487 PER---MTLFR----MVFLD--FRFL 503

>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 Length = 200

 Score = 41.4 bits (98), Expect = 2e-04
 Identities = 37/224 (16%), Positives = 71/224 (31%), Gaps = 65/224 (29%)

Query: 281 ILNGINENEY--GVDLS----LGQSFRSRIGIPKNASLVLGVAGRLVKD-KGHPLL---- 329
             NGI+ + +             +S  S+ G+ +         GR  +  KG  +L    
Sbjct: 2   SHNGIDCSFWNESYLTGSRDERKKSLLSKFGMDEGV--TFMFIGRFDRGQKGVDVLLKAI 59

Query: 330 ------------------------HEAFSKLMVKYPDVYLIVAGSGPWEQRY-KDFGHQV 364
                                         L  K+ +V +I            ++F  ++
Sbjct: 60  EILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHGNVKVITEM-------LSREFVREL 112

Query: 365 LVMGSMSPAELRAFYNAIDIFVNPTL-RPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVV 423
                         Y ++D  + P+   P G  L  +EAM  G   +AS    ++    +
Sbjct: 113 --------------YGSVDFVIIPSYFEPFG--LVALEAMCLGAIPIASAVGGLRDI--I 154

Query: 424 DDEFGFMFAP-NVESLHKTLEAAVSEGPMRLAQRGEACRQYAAS 466
            +E G +    +   L   +  A+      L++  E C++ A S
Sbjct: 155 TNETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMS 198

>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A Length = 485

 Score = 42.1 bits (100), Expect = 3e-04
 Identities = 23/114 (20%), Positives = 42/114 (36%), Gaps = 21/114 (18%)

Query: 264 GEMLRDVYQIPSERVHVILNGINENEY--GVDLSLGQSF---------------RSRIGI 306
           G  L  V    +  +H I+NGI+ + +    D  +  ++                    I
Sbjct: 227 GMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFRI 286

Query: 307 PKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDF 360
             + S +  V  RL   KG  L+ EA  +++       L+V G+G  +   +  
Sbjct: 287 DDDGSPLFCVISRLTWQKGIDLMAEAVDEIVSL--GGRLVVLGAG--DVALEGA 336

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	493
3okp_A	394	GDP-mannose-dependent alpha-(1-6)-phosphatidylino	100.0
3fro_A	439	GLGA glycogen synthase; glycosyltransferase family	100.0
3c48_A	438	Predicted glycosyltransferases; retaining glycosyl	100.0
2r60_A	499	Glycosyl transferase, group 1; rossmann-fold; 1.80	100.0
2jjm_A	394	Glycosyl transferase, group 1 family protein; anth	100.0
2gek_A	406	Phosphatidylinositol mannosyltransferase (PIMA); G	100.0
1rzu_A	485	Glycogen synthase 1; glycosyl-transferase, GT-B fo	100.0
3oy2_A	413	Glycosyltransferase B736L; rossmann fold, GDP-mann	100.0
2qzs_A	485	Glycogen synthase; glycosyl-transferase, GT-B fold	100.0
2x6q_A	416	Trehalose-synthase TRET; biosynthetic protein; 2.2	100.0
3vue_A	536	GBSS-I, granule-bound starch synthase 1, chloropla	100.0
2iw1_A	374	Lipopolysaccharide core biosynthesis protein RFAG;	100.0
3s28_A	816	Sucrose synthase 1; glycosyltransferase, sucrose m	100.0
2iuy_A	342	Avigt4, glycosyltransferase; antibiotics, family G	100.0
2x0d_A	413	WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge	100.0
2vsy_A	568	XCC0866; transferase, glycosyl transferase, GT-B,	100.0
2hy7_A	406	Glucuronosyltransferase GUMK; glycosyltransferases	100.0
1f0k_A	364	MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe	100.0
1vgv_A	384	UDP-N-acetylglucosamine 2-epimerase; structural ge	100.0
3beo_A	375	UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a	100.0
1uqt_A	482	Alpha, alpha-trehalose-phosphate synthase; glycosy	99.96
2bfw_A	200	GLGA glycogen synthase; glycosyltransferase family	99.96
3nb0_A	725	Glycogen [starch] synthase isoform 2; glycogen syn	99.96
1v4v_A	376	UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, t	99.95
3qhp_A	166	Type 1 capsular polysaccharide biosynthesis prote	99.95
3t5t_A	496	Putative glycosyltransferase; GTB fold, pseudoglyc	99.94
2xci_A	374	KDO-transferase, 3-deoxy-D-manno-2-octulosonic aci	99.93
3rhz_A	339	GTF3, nucleotide sugar synthetase-like protein; gl	99.92
2f9f_A	177	First mannosyl transferase (WBAZ-1); alpha-beta pr	99.92
3dzc_A	396	UDP-N-acetylglucosamine 2-epimerase; structural ge	99.91
3otg_A	412	CALG1; calicheamicin, TDP, structural genomics, PS	99.91
3ot5_A	403	UDP-N-acetylglucosamine 2-epimerase; structural ge	99.91
3s2u_A	365	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape	99.88
2iyf_A	430	OLED, oleandomycin glycosyltransferase; antibiotic	99.87
4fzr_A	398	SSFS6; structural genomics, PSI-biology, protein s	99.86
3tsa_A	391	SPNG, NDP-rhamnosyltransferase; glycosyltransferas	99.85
3ia7_A	402	CALG4; glycosysltransferase, calicheamicin, enediy	99.81
3oti_A	398	CALG3; calicheamicin, TDP, structural genomics, PS	99.8
4hwg_A	385	UDP-N-acetylglucosamine 2-epimerase; ssgcid, struc	99.8
3rsc_A	415	CALG2; TDP, enediyne, structural genomics, PSI-2,	99.79
3q3e_A	631	HMW1C-like glycosyltransferase; N-glycosylation; 2	99.79
2p6p_A	384	Glycosyl transferase; X-RAY-diffraction,urdamycina	99.75
4gyw_A	723	UDP-N-acetylglucosamine--peptide N- acetylglucosam	99.71
2yjn_A	441	ERYCIII, glycosyltransferase; transferase, cytochr	99.71
2iya_A	424	OLEI, oleandomycin glycosyltransferase; carbohydra	99.68
4amg_A	400	Snogd; transferase, polyketide biosynthesis, GT1 f	99.59
1iir_A	415	Glycosyltransferase GTFB; rossmann fold; 1.80A {Am	99.52
3h4t_A	404	Glycosyltransferase GTFA, glycosyltransferase; van	99.5
1rrv_A	416	Glycosyltransferase GTFD; GT-B, glycosyltransferas	99.43
2o6l_A	170	UDP-glucuronosyltransferase 2B7; drug metabolism,	99.34
1l5w_A	796	Maltodextrin phosphorylase; enzymatic catalysis, s	99.24
2gj4_A	824	Glycogen phosphorylase, muscle form; transferase;	99.12
2c4m_A	796	Glycogen phosphorylase; allosteric control, phosph	99.08
2acv_A	463	Triterpene UDP-glucosyl transferase UGT71G1; glyco	98.92
2pq6_A	482	UDP-glucuronosyl/UDP-glucosyltransferase; glycosyl	98.87
2vch_A	480	Hydroquinone glucosyltransferase; glycosyltransfer	98.73
3hbf_A	454	Flavonoid 3-O-glucosyltransferase; glycosyltransfe	98.73
1psw_A	348	ADP-heptose LPS heptosyltransferase II; structural	98.7
2c1x_A	456	UDP-glucose flavonoid 3-O glycosyltransferase; WIN	98.69
3hbm_A	282	UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter je	98.61
3l7i_A	729	Teichoic acid biosynthesis protein F; GT-B fold, m	98.38
3tov_A	349	Glycosyl transferase family 9; structural genomics	98.13
2gt1_A	326	Lipopolysaccharide heptosyltransferase-1; GT-B fol	97.8
2jzc_A	224	UDP-N-acetylglucosamine transferase subunit ALG13;	97.72
1ygp_A	879	Yeast glycogen phosphorylase; phosphorylated form,	96.14
1xv5_A	401	AGT, DNA alpha-glucosyltransferase; HET: DNA CME U	93.41
4g65_A	461	TRK system potassium uptake protein TRKA; structur	92.09
4gi5_A	280	Quinone reductase; protein structure initiative, F	84.93
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	84.62
2v4n_A	254	Multifunctional protein SUR E; hydrolase, surviVal	80.89
3q0i_A	318	Methionyl-tRNA formyltransferase; structural genom	80.44

>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*

Probab=100.00  E-value=3.4e-46  Score=368.68  Aligned_cols=366  Identities=17%  Similarity=0.210  Sum_probs=290.8

Q ss_pred             CCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCCCc
Q 039338           81 KFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEADK  160 (493)
Q Consensus        81 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (493)
                      +++|||++++..||+  ..||+++++.+++++|  +||+|+|++.....  ......      .......+..... ...
T Consensus         2 ~~~mkIl~v~~~~~p--~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~--~~~~~~------~~~~~~~~~~~~~-~~~   68 (394)
T 3okp_A            2 SASRKTLVVTNDFPP--RIGGIQSYLRDFIATQ--DPESIVVFASTQNA--EEAHAY------DKTLDYEVIRWPR-SVM   68 (394)
T ss_dssp             --CCCEEEEESCCTT--SCSHHHHHHHHHHTTS--CGGGEEEEEECSSH--HHHHHH------HTTCSSEEEEESS-SSC
T ss_pred             CCCceEEEEeCccCC--ccchHHHHHHHHHHHh--cCCeEEEEECCCCc--cchhhh------ccccceEEEEccc-ccc
Confidence            457999999998876  6899999999999999  69999999987654  100000      0011111222211 112


Q ss_pred             cccccchHHHHHHhcCCCCcEEEeCccchhH---H--hhhccCcEEEEeccchhhhhhhhhhhhhhcCCCCccchHhHhH
Q 039338          161 WRYSKGWEQFDEENQREPFDVVHSESVALPH---W--LARNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKS  235 (493)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~DiI~~~~~~~~~---~--~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (493)
                      .........+.+.+++.+||+||+++.....   .  ...++|+++.++|+.......                    ..
T Consensus        69 ~~~~~~~~~l~~~~~~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~--------------------~~  128 (394)
T 3okp_A           69 LPTPTTAHAMAEIIREREIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEVGWSM--------------------LP  128 (394)
T ss_dssp             CSCHHHHHHHHHHHHHTTCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHHHHTT--------------------SH
T ss_pred             ccchhhHHHHHHHHHhcCCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchhhhhh--------------------cc
Confidence            2233455677777788899999998653222   1  222456688899985431100                    01


Q ss_pred             HHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccC-CcccchhhhhhhCCCCCCcEEE
Q 039338          236 LQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGV-DLSLGQSFRSRIGIPKNASLVL  314 (493)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~-~~~~~~~~r~~~~i~~~~~~~i  314 (493)
                      ....+.     +.+++.+|.++++|+..++.+.+.++ +..++.+||||+|.+.+.+ .......++++++++++. ++|
T Consensus       129 ~~~~~~-----~~~~~~~d~ii~~s~~~~~~~~~~~~-~~~~~~vi~ngv~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i  201 (394)
T 3okp_A          129 GSRQSL-----RKIGTEVDVLTYISQYTLRRFKSAFG-SHPTFEHLPSGVDVKRFTPATPEDKSATRKKLGFTDTT-PVI  201 (394)
T ss_dssp             HHHHHH-----HHHHHHCSEEEESCHHHHHHHHHHHC-SSSEEEECCCCBCTTTSCCCCHHHHHHHHHHTTCCTTC-CEE
T ss_pred             hhhHHH-----HHHHHhCCEEEEcCHHHHHHHHHhcC-CCCCeEEecCCcCHHHcCCCCchhhHHHHHhcCCCcCc-eEE
Confidence            111111     25578999999999999999999876 4579999999999998877 555567889999998776 678


Q ss_pred             EEecccccccChHHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhhhc----CcEEEecCCCHHHHHHHHHHcCEEEeCCC
Q 039338          315 GVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDFG----HQVLVMGSMSPAELRAFYNAIDIFVNPTL  390 (493)
Q Consensus       315 ~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~l~----~~V~~~g~~~~~~~~~~~~~adv~v~ps~  390 (493)
                      +++|++.+.||++.+++|+..+.+++++++|+|+|+|+..+.++++.    ++|.|+|+++++++.++|+.||++|+||.
T Consensus       202 ~~~G~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~v~ps~  281 (394)
T 3okp_A          202 ACNSRLVPRKGQDSLIKAMPQVIAARPDAQLLIVGSGRYESTLRRLATDVSQNVKFLGRLEYQDMINTLAAADIFAMPAR  281 (394)
T ss_dssp             EEESCSCGGGCHHHHHHHHHHHHHHSTTCEEEEECCCTTHHHHHHHTGGGGGGEEEEESCCHHHHHHHHHHCSEEEECCC
T ss_pred             EEEeccccccCHHHHHHHHHHHHhhCCCeEEEEEcCchHHHHHHHHHhcccCeEEEcCCCCHHHHHHHHHhCCEEEecCc
Confidence            89999999999999999999999999999999999999888777653    89999999999999999999999999995


Q ss_pred             CC------CCCChHHHHHHHcCCcEEecCCCCCccceeeeCcceEEECC-CHHHHHHHHHHHHHcCcHHHHHHHHHHHHH
Q 039338          391 RP------QGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAP-NVESLHKTLEAAVSEGPMRLAQRGEACRQY  463 (493)
Q Consensus       391 ~~------eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~~-d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~  463 (493)
                      ..      ||+|++++|||++|+|||+++.++.. |++.++ +|+++++ |+++++++|.+++++ ++.++++++++++.
T Consensus       282 ~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~~~~-e~i~~~-~g~~~~~~d~~~l~~~i~~l~~~-~~~~~~~~~~~~~~  358 (394)
T 3okp_A          282 TRGGGLDVEGLGIVYLEAQACGVPVIAGTSGGAP-ETVTPA-TGLVVEGSDVDKLSELLIELLDD-PIRRAAMGAAGRAH  358 (394)
T ss_dssp             CBGGGTBCCSSCHHHHHHHHTTCCEEECSSTTGG-GGCCTT-TEEECCTTCHHHHHHHHHHHHTC-HHHHHHHHHHHHHH
T ss_pred             cccccccccccCcHHHHHHHcCCCEEEeCCCChH-HHHhcC-CceEeCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHH
Confidence            32      99999999999999999999999998 888888 9999999 999999999999998 99999999999999


Q ss_pred             HHHhcCHHHHHHHHHHHHHHHhhccc
Q 039338          464 AASMFTANKMALAYERLFLCIKNETF  489 (493)
Q Consensus       464 ~~~~fs~~~~~~~~~~~~~~i~~~~~  489 (493)
                      ++++|+|+.+++++.++|+++..++.
T Consensus       359 ~~~~~s~~~~~~~~~~~~~~~~r~~~  384 (394)
T 3okp_A          359 VEAEWSWEIMGERLTNILQSEPRKLA  384 (394)
T ss_dssp             HHHHTBHHHHHHHHHHHHHSCCC---
T ss_pred             HHHhCCHHHHHHHHHHHHHHhccCcc
Confidence            99999999999999999999876654

>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*

Probab=100.00  E-value=7.4e-47  Score=378.89  Aligned_cols=389  Identities=18%  Similarity=0.218  Sum_probs=285.8

Q ss_pred             CceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccc------cCCCCC--CCCCCceEe
Q 039338           82 FTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQ------ENDDGS--NNKYPLLHF  153 (493)
Q Consensus        82 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~------~~~~~~--~~~~~~~~~  153 (493)
                      ++|||++++..|+| ...||+++++..|+++|+++||+|+|+++.............      ......  ...+..+..
T Consensus         1 r~MkIl~v~~~~~p-~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~   79 (439)
T 3fro_A            1 RHMKVLLLGFEFLP-VKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYR   79 (439)
T ss_dssp             CCCEEEEECSCCTT-SCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTCSCCEEEEEEEETTEEEEEEEEEEEETTEEEEE
T ss_pred             CceEEEEEecccCC-cccCCHHHHHHHHHHHHHHCCCeEEEEecCCCCchhhhhccccccCcccceeeeeccCCCceEEE
Confidence            57999999998876 588999999999999999999999999977655111100000      000000  111222222


Q ss_pred             ecCC----CCccc------------cccchHHHHHHh--cCCCCcEEEeCccchh---HHh--hhccCcEEEEeccchhh
Q 039338          154 HEGE----ADKWR------------YSKGWEQFDEEN--QREPFDVVHSESVALP---HWL--ARNVTNLAVSWHGIALE  210 (493)
Q Consensus       154 ~~~~----~~~~~------------~~~~~~~~~~~~--~~~~~DiI~~~~~~~~---~~~--~~~~p~~v~~~h~~~~~  210 (493)
                      ....    ...+.            +......+.+.+  ++.+||+||+|+....   .++  ..++| +++++|+....
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~~~~~-~v~~~h~~~~~  158 (439)
T 3fro_A           80 IGGGLLDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHTVFAGALIKKYFKIP-AVFTIHRLNKS  158 (439)
T ss_dssp             EESGGGGCSSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTTSCCCSEEEEESGGGHHHHHHHHHHHCCC-EEEEESCCCCC
T ss_pred             ecchhccccccccCCcchhhhhhHHHHHHHHHHHHHHhccCCCCeEEEecchhhhhhHHHHhhccCCC-EEEEecccccc
Confidence            2210    00000            001111112222  2679999999975321   222  23557 99999998643


Q ss_pred             hhhhhhhhhhhcCCCCccchHhHhHHHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCc
Q 039338          211 SLQSGIFQDLTRKPLEPMSLAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEY  290 (493)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~  290 (493)
                      ............           .... .......+...++.+|.++++|+..++.....++.+..++.+||||+|.+.|
T Consensus       159 ~~~~~~~~~~~~-----------~~~~-~~~~~~~~~~~~~~ad~ii~~S~~~~~~~~~~~~~~~~~i~vi~ngvd~~~~  226 (439)
T 3fro_A          159 KLPAFYFHEAGL-----------SELA-PYPDIDPEHTGGYIADIVTTVSRGYLIDEWGFFRNFEGKITYVFNGIDCSFW  226 (439)
T ss_dssp             CEEHHHHHHTTC-----------GGGC-CSSEECHHHHHHHHCSEEEESCHHHHHHTHHHHGGGTTSEEECCCCCCTTTS
T ss_pred             cCchHHhCcccc-----------cccc-ccceeeHhhhhhhhccEEEecCHHHHHHHhhhhhhcCCceeecCCCCCchhc
Confidence            322221110000           0000 0000012335677899999999999998766666788999999999999988


Q ss_pred             cCCc------ccchhhhhhhCCCCCCcEEEEEecccc-cccChHHHHHHHHHHHhhC--CCeEEEEEeCCCcH--HHHhh
Q 039338          291 GVDL------SLGQSFRSRIGIPKNASLVLGVAGRLV-KDKGHPLLHEAFSKLMVKY--PDVYLIVAGSGPWE--QRYKD  359 (493)
Q Consensus       291 ~~~~------~~~~~~r~~~~i~~~~~~~i~~~Gr~~-~~Kg~~~ll~a~~~l~~~~--~~~~l~i~G~g~~~--~~~~~  359 (493)
                      .+..      ..+..+++++|++++  ++|+|+|++. +.||++.+++|++.+.+++  ++++|+++|+|+..  +.+++
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~~~l~i~G~g~~~~~~~l~~  304 (439)
T 3fro_A          227 NESYLTGSRDERKKSLLSKFGMDEG--VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARS  304 (439)
T ss_dssp             CGGGSCSCHHHHHHHHHHHHTCCSC--EEEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGGEEEEEECCCCHHHHHHHHH
T ss_pred             CcccccchhhhhHHHHHHHcCCCCC--cEEEEEcccccccccHHHHHHHHHHHHhcccCCCeEEEEEcCCChhHHHHHHH
Confidence            7652      245678899999766  7888999999 9999999999999999877  89999999998865  55544


Q ss_pred             h----cCcEEEecCCCHHHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCccceeeeCcceEEECC-C
Q 039338          360 F----GHQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAP-N  434 (493)
Q Consensus       360 l----~~~V~~~g~~~~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~~-d  434 (493)
                      +    ++.+.|.|+++++++.++|++||++|+||.. ||+|++++|||+||+|||+++.++.. |++.++ +|+++++ |
T Consensus       305 ~~~~~~~~~~~~g~~~~~~~~~~~~~adv~v~ps~~-e~~~~~~~EAma~G~Pvi~s~~~~~~-e~~~~~-~g~~~~~~d  381 (439)
T 3fro_A          305 LEEKHGNVKVITEMLSREFVRELYGSVDFVIIPSYF-EPFGLVALEAMCLGAIPIASAVGGLR-DIITNE-TGILVKAGD  381 (439)
T ss_dssp             HHHHCTTEEEECSCCCHHHHHHHHTTCSEEEECBSC-CSSCHHHHHHHHTTCEEEEESSTHHH-HHCCTT-TCEEECTTC
T ss_pred             HHhhcCCEEEEcCCCCHHHHHHHHHHCCEEEeCCCC-CCccHHHHHHHHCCCCeEEcCCCCcc-eeEEcC-ceEEeCCCC
Confidence            3    4678899999999999999999999999965 99999999999999999999999998 887776 9999999 9


Q ss_pred             HHHHHHHHHHHHH-cCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhcccCC
Q 039338          435 VESLHKTLEAAVS-EGPMRLAQRGEACRQYAASMFTANKMALAYERLFLCIKNETFCD  491 (493)
Q Consensus       435 ~~~l~~~i~~ll~-~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~i~~~~~~~  491 (493)
                      +++++++|.++++ + ++.++++++++++.+ ++|||+.+++++.++|++++++....
T Consensus       382 ~~~la~~i~~ll~~~-~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~  437 (439)
T 3fro_A          382 PGELANAILKALELS-RSDLSKFRENCKKRA-MSFSWEKSAERYVKAYTGSIDRAFDF  437 (439)
T ss_dssp             HHHHHHHHHHHHHHT-TTTTHHHHHHHHHHH-HTSCHHHHHHHHHHHHHTCSCCBCSS
T ss_pred             HHHHHHHHHHHHhcC-HHHHHHHHHHHHHHH-hhCcHHHHHHHHHHHHHHHHHhhhhh
Confidence            9999999999999 6 899999999999999 55999999999999999998876543

>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*

Probab=100.00  E-value=2.8e-45  Score=367.49  Aligned_cols=380  Identities=19%  Similarity=0.262  Sum_probs=278.4

Q ss_pred             CCCceEEEEEeccCCCCC-----CCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEee
Q 039338           80 SKFTLKIAVFSRKWPIST-----TPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFH  154 (493)
Q Consensus        80 ~~~~mkIl~v~~~~p~~~-----~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (493)
                      .++.|||++++..|+|..     ..||+++++..++++|.++||+|++++..... .......      ...+ ..+...
T Consensus        17 ~~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~-~~~~~~~------~~~~-v~v~~~   88 (438)
T 3c48_A           17 RGSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRP-SQGEIVR------VAEN-LRVINI   88 (438)
T ss_dssp             --CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCG-GGCSEEE------EETT-EEEEEE
T ss_pred             CcchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCCC-CCccccc------ccCC-eEEEEe
Confidence            455699999999886521     46999999999999999999999999976543 0111000      0011 112221


Q ss_pred             cCCCC----ccccccch----HHHHHH-hc-CCCCcEEEeCccc--hhHH-hh--hccCcEEEEeccchhhhhhhhhhhh
Q 039338          155 EGEAD----KWRYSKGW----EQFDEE-NQ-REPFDVVHSESVA--LPHW-LA--RNVTNLAVSWHGIALESLQSGIFQD  219 (493)
Q Consensus       155 ~~~~~----~~~~~~~~----~~~~~~-~~-~~~~DiI~~~~~~--~~~~-~~--~~~p~~v~~~h~~~~~~~~~~~~~~  219 (493)
                      .....    .......+    ..+.+. ++ ..+||+||+|...  +..+ +.  .++| +++++|+........     
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Div~~~~~~~~~~~~~~~~~~~~p-~v~~~h~~~~~~~~~-----  162 (438)
T 3c48_A           89 AAGPYEGLSKEELPTQLAAFTGGMLSFTRREKVTYDLIHSHYWLSGQVGWLLRDLWRIP-LIHTAHTLAAVKNSY-----  162 (438)
T ss_dssp             CCSCSSSCCGGGGGGGHHHHHHHHHHHHHHHTCCCSEEEEEHHHHHHHHHHHHHHHTCC-EEEECSSCHHHHSCC-----
T ss_pred             cCCCccccchhHHHHHHHHHHHHHHHHHHhccCCCCEEEeCCccHHHHHHHHHHHcCCC-EEEEecCCccccccc-----
Confidence            11110    01111111    122222 22 2249999999642  1111 22  3567 999999975422100     


Q ss_pred             hhcCCCCccchHhHhHHHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcc-cch
Q 039338          220 LTRKPLEPMSLAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLS-LGQ  298 (493)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~-~~~  298 (493)
                      .. ...         .... ..+...+...++.+|.++++|+..++.+.+.+|++..++.+||||+|.+.+.+... ...
T Consensus       163 ~~-~~~---------~~~~-~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~g~~~~k~~vi~ngvd~~~~~~~~~~~~~  231 (438)
T 3c48_A          163 RD-DSD---------TPES-EARRICEQQLVDNADVLAVNTQEEMQDLMHHYDADPDRISVVSPGADVELYSPGNDRATE  231 (438)
T ss_dssp             -----C---------CHHH-HHHHHHHHHHHHHCSEEEESSHHHHHHHHHHHCCCGGGEEECCCCCCTTTSCCC----CH
T ss_pred             cc-ccC---------Ccch-HHHHHHHHHHHhcCCEEEEcCHHHHHHHHHHhCCChhheEEecCCccccccCCcccchhh
Confidence            00 000         0000 11112234667899999999999999999888988889999999999988766432 223


Q ss_pred             hhhhhhCCCCCCcEEEEEecccccccChHHHHHHHHHHHhhCC--CeEEEEEeC----CCcHHHHhh----h--cCcEEE
Q 039338          299 SFRSRIGIPKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYP--DVYLIVAGS----GPWEQRYKD----F--GHQVLV  366 (493)
Q Consensus       299 ~~r~~~~i~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~--~~~l~i~G~----g~~~~~~~~----l--~~~V~~  366 (493)
                      ..+++++++.+. ++|+++|++.+.||++.+++|+..+.++.|  +++|+++|+    |+..+.+++    +  .++|.|
T Consensus       232 ~~r~~~~~~~~~-~~i~~~G~~~~~Kg~~~li~a~~~l~~~~p~~~~~l~i~G~~~~~g~~~~~l~~~~~~~~l~~~v~~  310 (438)
T 3c48_A          232 RSRRELGIPLHT-KVVAFVGRLQPFKGPQVLIKAVAALFDRDPDRNLRVIICGGPSGPNATPDTYRHMAEELGVEKRIRF  310 (438)
T ss_dssp             HHHHHTTCCSSS-EEEEEESCBSGGGCHHHHHHHHHHHHHHCTTCSEEEEEECCBC------CHHHHHHHHTTCTTTEEE
T ss_pred             hhHHhcCCCCCC-cEEEEEeeecccCCHHHHHHHHHHHHhhCCCcceEEEEEeCCCCCCcHHHHHHHHHHHcCCCCcEEE
Confidence            478899988776 788899999999999999999999998876  899999998    655544443    2  278999


Q ss_pred             ecCCCHHHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCccceeeeCcceEEECC-CHHHHHHHHHHH
Q 039338          367 MGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAP-NVESLHKTLEAA  445 (493)
Q Consensus       367 ~g~~~~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~~-d~~~l~~~i~~l  445 (493)
                      +|+++++++.++|+.||++|+||. .|++|++++|||+||+|||+++.++.. |++.++.+|+++++ |+++++++|.++
T Consensus       311 ~g~~~~~~~~~~~~~adv~v~ps~-~e~~~~~~~Eama~G~PvI~~~~~~~~-e~i~~~~~g~~~~~~d~~~la~~i~~l  388 (438)
T 3c48_A          311 LDPRPPSELVAVYRAADIVAVPSF-NESFGLVAMEAQASGTPVIAARVGGLP-IAVAEGETGLLVDGHSPHAWADALATL  388 (438)
T ss_dssp             ECCCCHHHHHHHHHHCSEEEECCS-CCSSCHHHHHHHHTTCCEEEESCTTHH-HHSCBTTTEEEESSCCHHHHHHHHHHH
T ss_pred             cCCCChHHHHHHHHhCCEEEECcc-ccCCchHHHHHHHcCCCEEecCCCChh-HHhhCCCcEEECCCCCHHHHHHHHHHH
Confidence            999999999999999999999996 599999999999999999999999998 89999999999998 999999999999


Q ss_pred             HHcCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhccc
Q 039338          446 VSEGPMRLAQRGEACRQYAASMFTANKMALAYERLFLCIKNETF  489 (493)
Q Consensus       446 l~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~i~~~~~  489 (493)
                      +++ ++.++++++++++.+++ |+|+.+++++.++|+++++++.
T Consensus       389 ~~~-~~~~~~~~~~~~~~~~~-~s~~~~~~~~~~~~~~~~~~~~  430 (438)
T 3c48_A          389 LDD-DETRIRMGEDAVEHART-FSWAATAAQLSSLYNDAIANEN  430 (438)
T ss_dssp             HHC-HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHTCC
T ss_pred             HcC-HHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHhhhcc
Confidence            998 99999999999999999 9999999999999999988753

>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*

Probab=100.00  E-value=1.2e-44  Score=368.80  Aligned_cols=393  Identities=15%  Similarity=0.116  Sum_probs=282.8

Q ss_pred             CceEEEEEeccCCCC---------CCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCC-CCCCCce
Q 039338           82 FTLKIAVFSRKWPIS---------TTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGS-NNKYPLL  151 (493)
Q Consensus        82 ~~mkIl~v~~~~p~~---------~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  151 (493)
                      ++|||++++..|+|.         ...||+++++.+++++|+++||+|+|++.....  ............. ......+
T Consensus         6 ~~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~--~~~~~~~~~~~~~~~~~gv~v   83 (499)
T 2r60_A            6 RIKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMGVQVDIITRRIKD--ENWPEFSGEIDYYQETNKVRI   83 (499)
T ss_dssp             -CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTTCEEEEEEECCCB--TTBGGGCCSEEECTTCSSEEE
T ss_pred             ccceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhcCCeEEEEeCCCCc--ccccchhhhHHhccCCCCeEE
Confidence            359999999977552         257999999999999999999999999976543  1100000000000 0111222


Q ss_pred             EeecCCCCc----ccccc----chHHHHHHhcC--CCCcEEEeCccch--hHH-h--hhccCcEEEEeccchhhhhhhhh
Q 039338          152 HFHEGEADK----WRYSK----GWEQFDEENQR--EPFDVVHSESVAL--PHW-L--ARNVTNLAVSWHGIALESLQSGI  216 (493)
Q Consensus       152 ~~~~~~~~~----~~~~~----~~~~~~~~~~~--~~~DiI~~~~~~~--~~~-~--~~~~p~~v~~~h~~~~~~~~~~~  216 (493)
                      .........    .....    ....+.+.+++  .+||+||+|+...  ... +  ..++| ++++.|+........  
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~Divh~~~~~~~~~~~~~~~~~~~p-~v~~~H~~~~~~~~~--  160 (499)
T 2r60_A           84 VRIPFGGDKFLPKEELWPYLHEYVNKIINFYREEGKFPQVVTTHYGDGGLAGVLLKNIKGLP-FTFTGHSLGAQKMEK--  160 (499)
T ss_dssp             EEECCSCSSCCCGGGCGGGHHHHHHHHHHHHHHHTCCCSEEEEEHHHHHHHHHHHHHHHCCC-EEEECSSCHHHHHHT--
T ss_pred             EEecCCCcCCcCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEcCCcchHHHHHHHHhcCCc-EEEEccCcccccchh--
Confidence            222211110    01111    11234445544  5899999997521  111 2  23567 999999975432211  


Q ss_pred             hhhhhcCCCCccchHhHhHHHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHH--hC-C----CCCcEEEecCCccCCC
Q 039338          217 FQDLTRKPLEPMSLAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDV--YQ-I----PSERVHVILNGINENE  289 (493)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~--~~-~----~~~~v~vi~ngvd~~~  289 (493)
                         ... .. .....+. .......+...++..++.+|.++++|+..++.+.+.  +| +    +..++.+||||+|.+.
T Consensus       161 ---~~~-~~-~~~~~~~-~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~g~~~~~~~~~ki~vi~ngvd~~~  234 (499)
T 2r60_A          161 ---LNV-NT-SNFKEMD-ERFKFHRRIIAERLTMSYADKIIVSTSQERFGQYSHDLYRGAVNVEDDDKFSVIPPGVNTRV  234 (499)
T ss_dssp             ---TCC-CS-TTSHHHH-HHHCHHHHHHHHHHHHHHCSEEEESSHHHHHHTTTSGGGTTTCCTTCGGGEEECCCCBCTTT
T ss_pred             ---hcc-CC-CCcchhh-hhHHHHHHHHHHHHHHhcCCEEEECCHHHHHHHHhhhcccccccccCCCCeEEECCCcChhh
Confidence               000 00 0000010 111111122223467889999999999999999887  77 6    7789999999999988


Q ss_pred             ccCCcc--cchhhhhhhC-----CCCCCcEEEEEecccccccChHHHHHHHHHHHhhCC-CeEEEEEeC--CC------c
Q 039338          290 YGVDLS--LGQSFRSRIG-----IPKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYP-DVYLIVAGS--GP------W  353 (493)
Q Consensus       290 ~~~~~~--~~~~~r~~~~-----i~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~-~~~l~i~G~--g~------~  353 (493)
                      |.+...  .+..+++++|     ++.+. ++|+++||+.+.||++.+++|+..+.++.+ .++++|+|+  |+      .
T Consensus       235 ~~~~~~~~~~~~~r~~~~~~~~~~~~~~-~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~y~~l  313 (499)
T 2r60_A          235 FDGEYGDKIKAKITKYLERDLGSERMEL-PAIIASSRLDQKKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRA  313 (499)
T ss_dssp             SSSCCCHHHHHHHHHHHHHHSCGGGTTS-CEEEECSCCCGGGCHHHHHHHHHTCHHHHHHCEEEEEESSCSBTTTBCTTS
T ss_pred             cCccchhhhHHHHHHHhcccccccCCCC-cEEEEeecCccccCHHHHHHHHHHHHHhCCCceEEEEECCCCCcccccccc
Confidence            876532  2356778887     76666 678899999999999999999999987644 468999998  33      1


Q ss_pred             -------HHHHhh----h--cCcEEEecCCCHHHHHHHHHHc----CEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCC
Q 039338          354 -------EQRYKD----F--GHQVLVMGSMSPAELRAFYNAI----DIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPS  416 (493)
Q Consensus       354 -------~~~~~~----l--~~~V~~~g~~~~~~~~~~~~~a----dv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~  416 (493)
                             .+.+++    +  .++|.|+|+++++++.++|++|    |++|+||.. ||+|++++|||+||+|||+++.++
T Consensus       314 ~~~~~~y~~~l~~~~~~~~l~~~V~~~G~v~~~~~~~~~~~a~~~~dv~v~pS~~-Eg~~~~~lEAma~G~PvI~s~~~g  392 (499)
T 2r60_A          314 GQEEKEILGKIIELIDNNDCRGKVSMFPLNSQQELAGCYAYLASKGSVFALTSFY-EPFGLAPVEAMASGLPAVVTRNGG  392 (499)
T ss_dssp             CHHHHHHHHHHHHHHHHTTCBTTEEEEECCSHHHHHHHHHHHHHTTCEEEECCSC-BCCCSHHHHHHHTTCCEEEESSBH
T ss_pred             cccchHHHHHHHHHHHhcCCCceEEECCCCCHHHHHHHHHhcCcCCCEEEECccc-CCCCcHHHHHHHcCCCEEEecCCC
Confidence                   333333    2  3789999999999999999999    999999965 999999999999999999999999


Q ss_pred             CccceeeeCcceEEECC-CHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhccc
Q 039338          417 IKGTIVVDDEFGFMFAP-NVESLHKTLEAAVSEGPMRLAQRGEACRQYAASMFTANKMALAYERLFLCIKNETF  489 (493)
Q Consensus       417 ~~~e~v~~~~~G~~~~~-d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~i~~~~~  489 (493)
                      .. |++.++.+|+++++ |+++++++|.+++++ ++.++++++++++.+.+.|||+.+++++.++|+++++++.
T Consensus       393 ~~-e~v~~~~~g~l~~~~d~~~la~~i~~ll~~-~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~~~~~~~  464 (499)
T 2r60_A          393 PA-EILDGGKYGVLVDPEDPEDIARGLLKAFES-EETWSAYQEKGKQRVEERYTWQETARGYLEVIQEIADRKD  464 (499)
T ss_dssp             HH-HHTGGGTSSEEECTTCHHHHHHHHHHHHSC-HHHHHHHHHHHHHHHHHHSBHHHHHHHHHHHHHHHHHC--
T ss_pred             HH-HHhcCCceEEEeCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhhh
Confidence            88 89999999999998 999999999999998 9999999999999999999999999999999999987653

>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*

Probab=100.00  E-value=7.8e-43  Score=344.74  Aligned_cols=357  Identities=20%  Similarity=0.276  Sum_probs=268.5

Q ss_pred             CceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCC---
Q 039338           82 FTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEA---  158 (493)
Q Consensus        82 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  158 (493)
                      ..||.-+....||   ..||+++++..|+++|+++||+|++++.....  ... ..          ...+.+.....   
T Consensus        12 ~~~~~~~~~~~~p---~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~--~~~-~~----------~~~i~~~~~~~~~~   75 (394)
T 2jjm_A           12 HHMKLKIGITCYP---SVGGSGVVGTELGKQLAERGHEIHFITSGLPF--RLN-KV----------YPNIYFHEVTVNQY   75 (394)
T ss_dssp             ---CCEEEEECCC-----CHHHHHHHHHHHHHHHTTCEEEEECSSCC-------CC----------CTTEEEECCCCC--
T ss_pred             hhheeeeehhcCC---CCCCHHHHHHHHHHHHHhCCCEEEEEeCCCCC--ccc-cc----------CCceEEEecccccc
Confidence            3576667777776   57999999999999999999999999986433  100 00          01111111000   


Q ss_pred             ----CccccccchHHHHHHhcCCCCcEEEeCccc---hhHHhhh-----ccCcEEEEeccchhhhhhhhhhhhhhcCCCC
Q 039338          159 ----DKWRYSKGWEQFDEENQREPFDVVHSESVA---LPHWLAR-----NVTNLAVSWHGIALESLQSGIFQDLTRKPLE  226 (493)
Q Consensus       159 ----~~~~~~~~~~~~~~~~~~~~~DiI~~~~~~---~~~~~~~-----~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~  226 (493)
                          ...........+.+.+++.+||+||+|+..   +..++.+     ++| ++.++|+.......         .   
T Consensus        76 ~~~~~~~~~~~~~~~l~~~l~~~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p-~v~~~h~~~~~~~~---------~---  142 (394)
T 2jjm_A           76 SVFQYPPYDLALASKMAEVAQRENLDILHVHYAIPHAICAYLAKQMIGERIK-IVTTLHGTDITVLG---------S---  142 (394)
T ss_dssp             --CCSCCHHHHHHHHHHHHHHHHTCSEEEECSSTTHHHHHHHHHHHTTTCSE-EEEECCHHHHHTTT---------T---
T ss_pred             cccccccccHHHHHHHHHHHHHcCCCEEEEcchhHHHHHHHHHHHhhcCCCC-EEEEEecCcccccC---------C---
Confidence                001111233455666667899999998642   2222222     356 99999985431100         0   


Q ss_pred             ccchHhHhHHHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCC
Q 039338          227 PMSLAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGI  306 (493)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i  306 (493)
                             ......+     +...++.+|.++++|+..++.+.+.++. ..++.+||||+|.+.+.+..  ...+++++++
T Consensus       143 -------~~~~~~~-----~~~~~~~ad~ii~~s~~~~~~~~~~~~~-~~~~~vi~ngv~~~~~~~~~--~~~~~~~~~~  207 (394)
T 2jjm_A          143 -------DPSLNNL-----IRFGIEQSDVVTAVSHSLINETHELVKP-NKDIQTVYNFIDERVYFKRD--MTQLKKEYGI  207 (394)
T ss_dssp             -------CTTTHHH-----HHHHHHHSSEEEESCHHHHHHHHHHTCC-SSCEEECCCCCCTTTCCCCC--CHHHHHHTTC
T ss_pred             -------CHHHHHH-----HHHHHhhCCEEEECCHHHHHHHHHhhCC-cccEEEecCCccHHhcCCcc--hHHHHHHcCC
Confidence                   0011111     1245678999999999999999987654 57999999999998876542  3567888888


Q ss_pred             CCCCcEEEEEecccccccChHHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhhh------cCcEEEecCCCHHHHHHHHH
Q 039338          307 PKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDF------GHQVLVMGSMSPAELRAFYN  380 (493)
Q Consensus       307 ~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~l------~~~V~~~g~~~~~~~~~~~~  380 (493)
                      +++. ++|+++|++.+.||++.+++|+..+.++ ++++|+++|+|+..+.++++      .++|.|+|+.  +++.++|+
T Consensus       208 ~~~~-~~i~~~G~~~~~Kg~~~li~a~~~l~~~-~~~~l~i~G~g~~~~~l~~~~~~~~l~~~v~~~g~~--~~~~~~~~  283 (394)
T 2jjm_A          208 SESE-KILIHISNFRKVKRVQDVVQAFAKIVTE-VDAKLLLVGDGPEFCTILQLVKNLHIEDRVLFLGKQ--DNVAELLA  283 (394)
T ss_dssp             C----CEEEEECCCCGGGTHHHHHHHHHHHHHS-SCCEEEEECCCTTHHHHHHHHHTTTCGGGBCCCBSC--SCTHHHHH
T ss_pred             CCCC-eEEEEeeccccccCHHHHHHHHHHHHhh-CCCEEEEECCchHHHHHHHHHHHcCCCCeEEEeCch--hhHHHHHH
Confidence            7665 6788999999999999999999999877 57999999999876665543      2789999974  79999999


Q ss_pred             HcCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCccceeeeCcceEEECC-CHHHHHHHHHHHHHcCcHHHHHHHHH
Q 039338          381 AIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAP-NVESLHKTLEAAVSEGPMRLAQRGEA  459 (493)
Q Consensus       381 ~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~~-d~~~l~~~i~~ll~~~~~~~~~~~~~  459 (493)
                      .||++|+||. .||+|++++|||++|+|||+++.++.. |++.++.+|+++++ |+++++++|.+++++ ++.+++++++
T Consensus       284 ~adv~v~ps~-~e~~~~~~~EAma~G~PvI~~~~~~~~-e~v~~~~~g~~~~~~d~~~la~~i~~l~~~-~~~~~~~~~~  360 (394)
T 2jjm_A          284 MSDLMLLLSE-KESFGLVLLEAMACGVPCIGTRVGGIP-EVIQHGDTGYLCEVGDTTGVADQAIQLLKD-EELHRNMGER  360 (394)
T ss_dssp             TCSEEEECCS-CCSCCHHHHHHHHTTCCEEEECCTTST-TTCCBTTTEEEECTTCHHHHHHHHHHHHHC-HHHHHHHHHH
T ss_pred             hCCEEEeccc-cCCCchHHHHHHhcCCCEEEecCCChH-HHhhcCCceEEeCCCCHHHHHHHHHHHHcC-HHHHHHHHHH
Confidence            9999999996 599999999999999999999999998 89999999999999 999999999999998 9999999999


Q ss_pred             HHHHHHHhcCHHHHHHHHHHHHHHHhhccc
Q 039338          460 CRQYAASMFTANKMALAYERLFLCIKNETF  489 (493)
Q Consensus       460 ~~~~~~~~fs~~~~~~~~~~~~~~i~~~~~  489 (493)
                      +++.+.+.|+|+.+++++.++|+++++++.
T Consensus       361 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~  390 (394)
T 2jjm_A          361 ARESVYEQFRSEKIVSQYETIYYDVLRDDK  390 (394)
T ss_dssp             HHHHHHHHSCHHHHHHHHHHHHHHTC----
T ss_pred             HHHHHHHhCCHHHHHHHHHHHHHHHHhhhh
Confidence            999998889999999999999999987643

>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*

Probab=100.00  E-value=6.8e-43  Score=346.51  Aligned_cols=360  Identities=18%  Similarity=0.301  Sum_probs=271.8

Q ss_pred             CCCCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCC-
Q 039338           79 PSKFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGE-  157 (493)
Q Consensus        79 ~~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  157 (493)
                      ...++|||++++..+|+  ..||+++++..++++|+++||+|++++.............        .....+.+.... 
T Consensus        16 ~~~~~MkIl~i~~~~~~--~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~   85 (406)
T 2gek_A           16 PRGSHMRIGMVCPYSFD--VPGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVKLPDYVV--------SGGKAVPIPYNGS   85 (406)
T ss_dssp             -----CEEEEECSSCTT--SCCHHHHHHHHHHHHHHHTTCEEEEEESCCTTSCCCTTEE--------ECCCCC-------
T ss_pred             cCCCcceEEEEeccCCC--CCCcHHHHHHHHHHHHHHCCCeEEEEecCCccccCCcccc--------cCCcEEeccccCC
Confidence            34567999999987653  6799999999999999999999999998765510111100        000111110000 


Q ss_pred             CCcccc-ccchHHHHHHhcCCCCcEEEeCccchh---HHhh--hccCcEEEEeccchhhhhhhhhhhhhhcCCCCccchH
Q 039338          158 ADKWRY-SKGWEQFDEENQREPFDVVHSESVALP---HWLA--RNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLA  231 (493)
Q Consensus       158 ~~~~~~-~~~~~~~~~~~~~~~~DiI~~~~~~~~---~~~~--~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (493)
                      ...+.+ ......+.+.+++.+||+||+++....   ..+.  .+.| +++++|+.....                    
T Consensus        86 ~~~~~~~~~~~~~l~~~l~~~~~Dii~~~~~~~~~~~~~~~~~~~~~-~i~~~h~~~~~~--------------------  144 (406)
T 2gek_A           86 VARLRFGPATHRKVKKWIAEGDFDVLHIHEPNAPSLSMLALQAAEGP-IVATFHTSTTKS--------------------  144 (406)
T ss_dssp             -----CCHHHHHHHHHHHHHHCCSEEEEECCCSSSHHHHHHHHEESS-EEEEECCCCCSH--------------------
T ss_pred             cccccccHHHHHHHHHHHHhcCCCEEEECCccchHHHHHHHHhcCCC-EEEEEcCcchhh--------------------
Confidence            000111 112355666666779999999875321   1222  2556 999999853221                    


Q ss_pred             hHhHHHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCCCCCCc
Q 039338          232 FNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNAS  311 (493)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~  311 (493)
                         .....+.+.+.  ..++.+|.++++|+..++.+.+.++  ..++ +||||+|.+.+.+....       .+++.++ 
T Consensus       145 ---~~~~~~~~~~~--~~~~~~d~ii~~s~~~~~~~~~~~~--~~~~-vi~~~v~~~~~~~~~~~-------~~~~~~~-  208 (406)
T 2gek_A          145 ---LTLSVFQGILR--PYHEKIIGRIAVSDLARRWQMEALG--SDAV-EIPNGVDVASFADAPLL-------DGYPREG-  208 (406)
T ss_dssp             ---HHHHHHHSTTH--HHHTTCSEEEESSHHHHHHHHHHHS--SCEE-ECCCCBCHHHHHTCCCC-------TTCSCSS-
T ss_pred             ---hhHHHHHHHHH--HHHhhCCEEEECCHHHHHHHHHhcC--CCcE-EecCCCChhhcCCCchh-------hhccCCC-
Confidence               11112222222  5678999999999999999988765  4578 99999998776554321       1223333 


Q ss_pred             EEEEEeccc-ccccChHHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhhh----cCcEEEecCCCHHHHHHHHHHcCEEE
Q 039338          312 LVLGVAGRL-VKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDF----GHQVLVMGSMSPAELRAFYNAIDIFV  386 (493)
Q Consensus       312 ~~i~~~Gr~-~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~l----~~~V~~~g~~~~~~~~~~~~~adv~v  386 (493)
                      .+|+|+|++ .+.||++.+++++..+.+++++++|+++|+|+. +.++++    .++|.|+|+++++++.++|+.||++|
T Consensus       209 ~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~~~~-~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~adv~v  287 (406)
T 2gek_A          209 RTVLFLGRYDEPRKGMAVLLAALPKLVARFPDVEILIVGRGDE-DELREQAGDLAGHLRFLGQVDDATKASAMRSADVYC  287 (406)
T ss_dssp             CEEEEESCTTSGGGCHHHHHHHHHHHHTTSTTCEEEEESCSCH-HHHHHHTGGGGGGEEECCSCCHHHHHHHHHHSSEEE
T ss_pred             eEEEEEeeeCccccCHHHHHHHHHHHHHHCCCeEEEEEcCCcH-HHHHHHHHhccCcEEEEecCCHHHHHHHHHHCCEEE
Confidence            688899999 999999999999999999889999999999887 555554    47899999999999999999999999


Q ss_pred             eCCCCCCCCChHHHHHHHcCCcEEecCCCCCccceeeeCcceEEECC-CHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHH
Q 039338          387 NPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAP-NVESLHKTLEAAVSEGPMRLAQRGEACRQYAA  465 (493)
Q Consensus       387 ~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~~-d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~  465 (493)
                      +||.+.||+|++++|||++|+|||+++.++.. |++.++.+|+++++ |+++++++|.+++++ ++.+.++++++++.++
T Consensus       288 ~ps~~~e~~~~~~~Ea~a~G~PvI~~~~~~~~-e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~-~~~~~~~~~~~~~~~~  365 (406)
T 2gek_A          288 APHLGGESFGIVLVEAMAAGTAVVASDLDAFR-RVLADGDAGRLVPVDDADGMAAALIGILED-DQLRAGYVARASERVH  365 (406)
T ss_dssp             ECCCSCCSSCHHHHHHHHHTCEEEECCCHHHH-HHHTTTTSSEECCTTCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHGG
T ss_pred             ecCCCCCCCchHHHHHHHcCCCEEEecCCcHH-HHhcCCCceEEeCCCCHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHH
Confidence            99864699999999999999999999999988 88998999999998 999999999999998 8999999999999999


Q ss_pred             HhcCHHHHHHHHHHHHHHHhhccc
Q 039338          466 SMFTANKMALAYERLFLCIKNETF  489 (493)
Q Consensus       466 ~~fs~~~~~~~~~~~~~~i~~~~~  489 (493)
                       .|+|+.+++++.++|+++++++.
T Consensus       366 -~~s~~~~~~~~~~~~~~~~~~~~  388 (406)
T 2gek_A          366 -RYDWSVVSAQIMRVYETVSGAGI  388 (406)
T ss_dssp             -GGBHHHHHHHHHHHHHHHCCTTC
T ss_pred             -hCCHHHHHHHHHHHHHHHHhhcc
Confidence             79999999999999999987653

>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A

Probab=100.00  E-value=6.6e-44  Score=362.22  Aligned_cols=391  Identities=17%  Similarity=0.194  Sum_probs=271.3

Q ss_pred             eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCC--CCccccC--------CCCC--CCCCCce
Q 039338           84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSP--SISHQEN--------DDGS--NNKYPLL  151 (493)
Q Consensus        84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~--~~~~~~~--------~~~~--~~~~~~~  151 (493)
                      |||++++..|+|....||+++++.+|+++|+++||+|+|++.........  .......        ....  ...+..+
T Consensus         1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v   80 (485)
T 1rzu_A            1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGYPAVKAAVTDPVKCFEFTDLLGEKADLLEVQHERLDL   80 (485)
T ss_dssp             CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCHHHHHHCCSCEEEEEESCSSSCCEEEEEEEETTEEE
T ss_pred             CeEEEEeeeeccccccccHHHHHHHHHHHHHHcCCeEEEEecccccccccccccceeEEEEEecCCeEEEEEEEecCceE
Confidence            89999999887644579999999999999999999999999754320000  0000000        0000  0011122


Q ss_pred             EeecC-----CCC-ccc-------------cccchHHHHHHh----cCCCCcEEEeCccc---hhHHhh----hccCcEE
Q 039338          152 HFHEG-----EAD-KWR-------------YSKGWEQFDEEN----QREPFDVVHSESVA---LPHWLA----RNVTNLA  201 (493)
Q Consensus       152 ~~~~~-----~~~-~~~-------------~~~~~~~~~~~~----~~~~~DiI~~~~~~---~~~~~~----~~~p~~v  201 (493)
                      +....     ... .+.             +......+.+.+    ++.+|||||+|+..   ++.++.    .++| ++
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DiIh~~~~~~~~~~~~~~~~~~~~~p-~v  159 (485)
T 1rzu_A           81 LILDAPAYYERSGGPYLGQTGKDYPDNWKRFAALSLAAARIGAGVLPGWRPDMVHAHDWQAAMTPVYMRYAETPEIP-SL  159 (485)
T ss_dssp             EEEECHHHHCSSSCSSBCTTSSBCTTHHHHHHHHHHHHHHHHTTCSSSCCCSEEEEEHHHHTTHHHHHHHSSSCCCC-EE
T ss_pred             EEEeChHHhCCCccccCCcccccccchHHHHHHHHHHHHHHHHHhccCCCCCEEEecccchhHHHHHHhhcccCCCC-EE
Confidence            22111     000 010             000111122222    47799999999742   222232    3557 99


Q ss_pred             EEeccchhhhhhh-hhhhhhhcCCCCccchHhHhHHHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHH-hC-------
Q 039338          202 VSWHGIALESLQS-GIFQDLTRKPLEPMSLAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDV-YQ-------  272 (493)
Q Consensus       202 ~~~h~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~-~~-------  272 (493)
                      +++|+.+...... ...... ..+.......... ...   ....++..++.+|.++++|+..++.+.+. +|       
T Consensus       160 ~t~H~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~---~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~g~~~~~~~  234 (485)
T 1rzu_A          160 LTIHNIAFQGQFGANIFSKL-ALPAHAFGMEGIE-YYN---DVSFLKGGLQTATALSTVSPSYAEEILTAEFGMGLEGVI  234 (485)
T ss_dssp             EEESCTTCCCEECGGGGGGS-CCCGGGSSTTTTE-ETT---EEEHHHHHHHHCSEEEESCHHHHHHTTSHHHHTTCHHHH
T ss_pred             EEecCccccCCCCHHHHhhc-CCChhhccccccc-ccc---cccHHHHHHhhcCEEEecCHhHHHHHhccccCcchHHHH
Confidence            9999975421111 000000 0000000000000 000   00112355678999999999999998764 44       


Q ss_pred             -CCCCcEEEecCCccCCCccCCccc-----------------chhhhhhhCCCCCCcEEEEEecccccccChHHHHHHHH
Q 039338          273 -IPSERVHVILNGINENEYGVDLSL-----------------GQSFRSRIGIPKNASLVLGVAGRLVKDKGHPLLHEAFS  334 (493)
Q Consensus       273 -~~~~~v~vi~ngvd~~~~~~~~~~-----------------~~~~r~~~~i~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~  334 (493)
                       ++..++.+||||+|.+.|.+....                 +..+++++|++.++..+|+++||+.+.||++.+++|+.
T Consensus       235 ~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~  314 (485)
T 1rzu_A          235 GSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFRIDDDGSPLFCVISRLTWQKGIDLMAEAVD  314 (485)
T ss_dssp             HTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHHHTCCCSSSCEEEEESCBSTTTTHHHHHTTHH
T ss_pred             HhhcCCceEEcCCCcccccCCcccccccccccccchhhHHHhHHHHHHhcCCCCCCCeEEEEEccCccccCHHHHHHHHH
Confidence             467899999999999888765432                 46788999998863368899999999999999999999


Q ss_pred             HHHhhCCCeEEEEEeCCCc--HHHHhh----hcCcEE-EecCCCHHHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcCC
Q 039338          335 KLMVKYPDVYLIVAGSGPW--EQRYKD----FGHQVL-VMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGK  407 (493)
Q Consensus       335 ~l~~~~~~~~l~i~G~g~~--~~~~~~----l~~~V~-~~g~~~~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G~  407 (493)
                      .+.+  ++++|+|+|+|+.  .+.+++    ++++|. +.|+ +++++.++|++||++|+||.. ||||++++|||+||+
T Consensus       315 ~l~~--~~~~l~ivG~g~~~~~~~l~~~~~~~~~~v~~~~g~-~~~~~~~~~~~adv~v~pS~~-E~~~~~~lEAma~G~  390 (485)
T 1rzu_A          315 EIVS--LGGRLVVLGAGDVALEGALLAAASRHHGRVGVAIGY-NEPLSHLMQAGCDAIIIPSRF-EPCGLTQLYALRYGC  390 (485)
T ss_dssp             HHHH--TTCEEEEEECBCHHHHHHHHHHHHHTTTTEEEEESC-CHHHHHHHHHHCSEEEECCSC-CSSCSHHHHHHHHTC
T ss_pred             HHHh--cCceEEEEeCCchHHHHHHHHHHHhCCCcEEEecCC-CHHHHHHHHhcCCEEEECccc-CCCCHHHHHHHHCCC
Confidence            9976  4899999999863  444444    347887 7888 778889999999999999974 999999999999999


Q ss_pred             cEEecCCCCCccceeeeC---------cceEEECC-CHHHHHHHHHHHH---HcCcHHHHHHHHHHHHHHHHhcCHHHHH
Q 039338          408 PVMASRFPSIKGTIVVDD---------EFGFMFAP-NVESLHKTLEAAV---SEGPMRLAQRGEACRQYAASMFTANKMA  474 (493)
Q Consensus       408 PvI~s~~~~~~~e~v~~~---------~~G~~~~~-d~~~l~~~i~~ll---~~~~~~~~~~~~~~~~~~~~~fs~~~~~  474 (493)
                      |||+++.||.+ |++.++         .+|+++++ |+++|+++|.+++   +| ++.++++++++++   +.|||+.++
T Consensus       391 PvI~s~~gg~~-e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~~~~~-~~~~~~~~~~~~~---~~fs~~~~~  465 (485)
T 1rzu_A          391 IPVVARTGGLA-DTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHD-PKLWTQMQKLGMK---SDVSWEKSA  465 (485)
T ss_dssp             EEEEESSHHHH-HHCCBCCHHHHHTTCCCBEEESSCSHHHHHHHHHHHHHHHTC-HHHHHHHHHHHHT---CCCBHHHHH
T ss_pred             CEEEeCCCChh-heecccccccccccCCcceEeCCCCHHHHHHHHHHHHHHhCC-HHHHHHHHHHHHH---HhCChHHHH
Confidence            99999999998 888888         89999999 9999999999999   67 8899999999874   679999999


Q ss_pred             HHHHHHHHHHhhccc
Q 039338          475 LAYERLFLCIKNETF  489 (493)
Q Consensus       475 ~~~~~~~~~i~~~~~  489 (493)
                      ++|.++|++++++..
T Consensus       466 ~~~~~~y~~~~~~~~  480 (485)
T 1rzu_A          466 GLYAALYSQLISKGH  480 (485)
T ss_dssp             HHHHHHHHHHTC---
T ss_pred             HHHHHHHHHhhCCCC
Confidence            999999999988754

>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*

Probab=100.00  E-value=1.2e-42  Score=345.52  Aligned_cols=345  Identities=14%  Similarity=0.164  Sum_probs=265.0

Q ss_pred             eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCC--ceEeecCCCCcc
Q 039338           84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYP--LLHFHEGEADKW  161 (493)
Q Consensus        84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~  161 (493)
                      |||+++++.+|   ..||+++++..|+++|+++ |+|++++.....  ......          ..  ............
T Consensus         1 MkI~~v~~~~p---~~gG~~~~~~~l~~~L~~~-~~V~v~~~~~~g--~~~~~~----------~~~~~~~~~~~~~~~~   64 (413)
T 3oy2_A            1 MKLIIVGAHSS---VPSGYGRVMRAIVPRISKA-HEVIVFGIHAFG--RSVHAN----------IEEFDAQTAEHVRGLN   64 (413)
T ss_dssp             CEEEEEEECTT---CCSHHHHHHHHHHHHHTTT-SEEEEEEESCCS--CCSCSS----------SEEEEHHHHHHHTTCC
T ss_pred             CeEEEecCCCC---CCCCHHHHHHHHHHHHHhc-CCeEEEeecCCC--cccccc----------cccCCccccccccccc
Confidence            89999998764   5699999999999999999 999999876543  111000          00  000000000000


Q ss_pred             ccccchHHHHHHhcCCCCcEEEeCccch-h-HHh--hhccC---cEEEEeccchhhhhhhhhhhhhhcCCCCccchHhHh
Q 039338          162 RYSKGWEQFDEENQREPFDVVHSESVAL-P-HWL--ARNVT---NLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNK  234 (493)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~DiI~~~~~~~-~-~~~--~~~~p---~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (493)
                      .....+..+.+.+++.+||+||+|.... . .+.  ...+|   +.+..+|.......                     .
T Consensus        65 ~~~~~~~~l~~~l~~~~~Div~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~  123 (413)
T 3oy2_A           65 EQGFYYSGLSEFIDVHKPDIVMIYNDPIVIGNYLLAMGKCSHRTKIVLYVDLVSKNIR---------------------E  123 (413)
T ss_dssp             STTCCHHHHHHHHHHHCCSEEEEEECHHHHHHHHHHGGGCCSCCEEEEEECCCSBSCC---------------------G
T ss_pred             cccchHHHHHHHHHhcCCCEEEEcchHHHHHHHHHHhccCCCCCceeeeccccchhhH---------------------H
Confidence            0112334455666677999999995421 1 111  12223   24555554321100                     0


Q ss_pred             HHHHHHHHHHHHHHhhccCC--eEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCCCC--CC
Q 039338          235 SLQGVMLKVLNEIRFFNKYA--HHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPK--NA  310 (493)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~~d--~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~--~~  310 (493)
                      .          ...+++++|  .++++|+..++.+.+ +|. ..++.+||||+|.+.+       ...++++++++  +.
T Consensus       124 ~----------~~~~~~~~~~~~ii~~S~~~~~~~~~-~~~-~~~~~vi~ngvd~~~~-------~~~~~~~~~~~~~~~  184 (413)
T 3oy2_A          124 N----------LWWIFSHPKVVGVMAMSKCWISDICN-YGC-KVPINIVSHFVDTKTI-------YDARKLVGLSEYNDD  184 (413)
T ss_dssp             G----------GGGGGGCTTEEEEEESSTHHHHHHHH-TTC-CSCEEECCCCCCCCCC-------TTHHHHTTCGGGTTS
T ss_pred             H----------HHHHHhccCCceEEEcCHHHHHHHHH-cCC-CCceEEeCCCCCHHHH-------HHHHHhcCCCcccCc
Confidence            0          125678888  999999999999998 776 6899999999999877       34567788876  54


Q ss_pred             cEEEEEecccccccChHHHHHHHHHHHhhCCCeEEEEEeCCCcH------HHHhh----hc--Cc-------EEEecCCC
Q 039338          311 SLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWE------QRYKD----FG--HQ-------VLVMGSMS  371 (493)
Q Consensus       311 ~~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~------~~~~~----l~--~~-------V~~~g~~~  371 (493)
                       ++|+++||+.+.||++.+++|+..+.+++++++|+|+|+|+..      +.+++    ++  ++       |.+.|+++
T Consensus       185 -~~il~vGr~~~~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~~~l~~~v~~l~~vv~~~g~~~  263 (413)
T 3oy2_A          185 -VLFLNMNRNTARKRLDIYVLAAARFISKYPDAKVRFLCNSHHESKFDLHSIALRELVASGVDNVFTHLNKIMINRTVLT  263 (413)
T ss_dssp             -EEEECCSCSSGGGTHHHHHHHHHHHHHHCTTCCEEEEEECCTTCSCCHHHHHHHHHHHHTCSCHHHHHTTEEEECSCCC
T ss_pred             -eEEEEcCCCchhcCcHHHHHHHHHHHHhCCCcEEEEEeCCcccchhhHHHHHHHHHHHcCcccccccccceeeccCcCC
Confidence             8899999999999999999999999999999999999998753      55554    22  54       88899999


Q ss_pred             HHHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCccceeeeCcc---------------eE--EECC-
Q 039338          372 PAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEF---------------GF--MFAP-  433 (493)
Q Consensus       372 ~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~---------------G~--~~~~-  433 (493)
                      ++++.++|++||++|+||. .||||++++|||++|+|||+++.+|.+ |++.++.+               |+  ++++ 
T Consensus       264 ~~~~~~~~~~adv~v~pS~-~E~~~~~~lEAma~G~PvI~s~~~g~~-e~v~~~~~~~i~~~~~~~~~~~~G~~gl~~~~  341 (413)
T 3oy2_A          264 DERVDMMYNACDVIVNCSS-GEGFGLCSAEGAVLGKPLIISAVGGAD-DYFSGDCVYKIKPSAWISVDDRDGIGGIEGII  341 (413)
T ss_dssp             HHHHHHHHHHCSEEEECCS-CCSSCHHHHHHHTTTCCEEEECCHHHH-HHSCTTTSEEECCCEEEECTTTCSSCCEEEEC
T ss_pred             HHHHHHHHHhCCEEEeCCC-cCCCCcHHHHHHHcCCCEEEcCCCChH-HHHccCcccccccccccccccccCcceeeCCC
Confidence            9999999999999999996 599999999999999999999999988 88888877               99  9998 


Q ss_pred             CHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhccc
Q 039338          434 NVESLHKTLEAAVSEGPMRLAQRGEACRQYAASMFTANKMALAYERLFLCIKNETF  489 (493)
Q Consensus       434 d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~i~~~~~  489 (493)
                      |+++++++| +++++ ++.++++++++++++++.|||+.++++++++|+++++++.
T Consensus       342 d~~~la~~i-~l~~~-~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~~~~  395 (413)
T 3oy2_A          342 DVDDLVEAF-TFFKD-EKNRKEYGKRVQDFVKTKPTWDDISSDIIDFFNSLLRVES  395 (413)
T ss_dssp             CHHHHHHHH-HHTTS-HHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHTC---
T ss_pred             CHHHHHHHH-HHhcC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhcC
Confidence            999999999 99998 9999999999999998889999999999999999988754

>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A

Probab=100.00  E-value=1.5e-42  Score=352.14  Aligned_cols=390  Identities=17%  Similarity=0.186  Sum_probs=268.5

Q ss_pred             eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCc--cc---c----CCCCC--CCCCCceE
Q 039338           84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSIS--HQ---E----NDDGS--NNKYPLLH  152 (493)
Q Consensus        84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~--~~---~----~~~~~--~~~~~~~~  152 (493)
                      |||++++..|+|....||+++++.+|+++|+++||+|+|++............  ..   .    .....  ......++
T Consensus         1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~   80 (485)
T 2qzs_A            1 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAFPDIRRGVTDAQVVSRRDTFAGHITLLFGHYNGVGIY   80 (485)
T ss_dssp             CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHHTTCEEEEEEECCHHHHHHCTTCEEEEEECCTTCCEEEEEEEETTEEEE
T ss_pred             CeEEEEeeeccccccCCcHHHHHHHHHHHHHHcCCEEEEEecCccccccccccceeEEEecccCCcEEEEEEEECCcEEE
Confidence            89999999886644689999999999999999999999999754320000000  00   0    00000  00111222


Q ss_pred             eecC-----CCC-ccc-------------cccchHHHHHHhc----CCCCcEEEeCccc---hhHHhh---hccCcEEEE
Q 039338          153 FHEG-----EAD-KWR-------------YSKGWEQFDEENQ----REPFDVVHSESVA---LPHWLA---RNVTNLAVS  203 (493)
Q Consensus       153 ~~~~-----~~~-~~~-------------~~~~~~~~~~~~~----~~~~DiI~~~~~~---~~~~~~---~~~p~~v~~  203 (493)
                      ....     ... .+.             +......+.+.++    +.+|||||+|+..   ++.++.   .++| ++++
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Divh~~~~~~~~~~~~~~~~~~~~p-~v~t  159 (485)
T 2qzs_A           81 LIDAPHLYDRPGSPYHDTNLFAYTDNVLRFALLGWVGAEMASGLDPFWRPDVVHAHDWHAGLAPAYLAARGRPAK-SVFT  159 (485)
T ss_dssp             EEECHHHHCCSSCSSBCTTSCBCTTHHHHHHHHHHHHHHHTTTSSTTCCCSEEEEETGGGTTHHHHHHHTTCSSE-EEEE
T ss_pred             EEeChhhccCCCCccCCcccCCCCchHHHHHHHHHHHHHHHHHhccCCCCCEEEeeccchhHHHHHHhhccCCCC-EEEE
Confidence            2111     000 010             0001223334443    3799999999752   222222   3456 9999


Q ss_pred             eccchhhhhhh-hhhhhhhcCCCCccchHhHhHHHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHH-hCCC-------
Q 039338          204 WHGIALESLQS-GIFQDLTRKPLEPMSLAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDV-YQIP-------  274 (493)
Q Consensus       204 ~h~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~-~~~~-------  274 (493)
                      +|+.+...... ...... ..+......... ...   .....++..++.+|.++++|+..++.+.+. +|..       
T Consensus       160 ~H~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~---~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~~~~~~~  234 (485)
T 2qzs_A          160 VHNLAYQGMFYAHHMNDI-QLPWSFFNIHGL-EFN---GQISFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGLLQQ  234 (485)
T ss_dssp             ESCTTCCCEEEGGGGGTT-TCCGGGCSTTTT-EET---TEEEHHHHHHHHCSEEEESSHHHHHHTTSHHHHTTCHHHHHH
T ss_pred             ecCccccCCCCHHHHHhc-CCCchhcccccc-ccc---ccccHHHHHHHhcCeEEecCHHHHHHHhccccCcchHHHHHh
Confidence            99975321110 000000 000000000000 000   000112245678999999999999998764 4532       


Q ss_pred             -C--CcEEEecCCccCCCccCCcc-----------------cchhhhhhhCCCCC-CcEEEEEecccccccChHHHHHHH
Q 039338          275 -S--ERVHVILNGINENEYGVDLS-----------------LGQSFRSRIGIPKN-ASLVLGVAGRLVKDKGHPLLHEAF  333 (493)
Q Consensus       275 -~--~~v~vi~ngvd~~~~~~~~~-----------------~~~~~r~~~~i~~~-~~~~i~~~Gr~~~~Kg~~~ll~a~  333 (493)
                       .  .++.+||||+|.+.|.+...                 .+..+++++|++.+ +.++|+++||+.+.||++.+++|+
T Consensus       235 ~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~  314 (485)
T 2qzs_A          235 RHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAENKRQLQIAMGLKVDDKVPLFAVVSRLTSQKGLDLVLEAL  314 (485)
T ss_dssp             HHHTTCEEECCCCCCTTTSCTTTCTTSSSCCCTTCGGGGHHHHHHHHHHHTCCCCTTSCEEEEEEEESGGGCHHHHHHHH
T ss_pred             hccCCceEEEecCCCccccCccccccccccccccchhHHHHhHHHHHHHcCCCCCCCCeEEEEeccCccccCHHHHHHHH
Confidence             2  78999999999988876543                 24678889999862 337888999999999999999999


Q ss_pred             HHHHhhCCCeEEEEEeCCC--cHHHHhh----hcCcEE-EecCCCHHHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcC
Q 039338          334 SKLMVKYPDVYLIVAGSGP--WEQRYKD----FGHQVL-VMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSG  406 (493)
Q Consensus       334 ~~l~~~~~~~~l~i~G~g~--~~~~~~~----l~~~V~-~~g~~~~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G  406 (493)
                      +.+.+  ++++|+|+|+|+  ..+.+++    ++++|. +.|+ +++++.++|++||++|+||. .||+|++++|||+||
T Consensus       315 ~~l~~--~~~~l~ivG~g~~~~~~~l~~~~~~~~~~v~~~~g~-~~~~~~~~~~~adv~v~pS~-~E~~g~~~lEAma~G  390 (485)
T 2qzs_A          315 PGLLE--QGGQLALLGAGDPVLQEGFLAAAAEYPGQVGVQIGY-HEAFSHRIMGGADVILVPSR-FEPCGLTQLYGLKYG  390 (485)
T ss_dssp             HHHHH--TTCEEEEEEEECHHHHHHHHHHHHHSTTTEEEEESC-CHHHHHHHHHHCSEEEECCS-CCSSCSHHHHHHHHT
T ss_pred             HHHhh--CCcEEEEEeCCchHHHHHHHHHHHhCCCcEEEeCCC-CHHHHHHHHHhCCEEEECCc-cCCCcHHHHHHHHCC
Confidence            99976  489999999986  3444444    346886 7888 77888999999999999996 499999999999999


Q ss_pred             CcEEecCCCCCccceeeeC---------cceEEECC-CHHHHHHHHHHHH---HcCcHHHHHHHHHHHHHHHHhcCHHHH
Q 039338          407 KPVMASRFPSIKGTIVVDD---------EFGFMFAP-NVESLHKTLEAAV---SEGPMRLAQRGEACRQYAASMFTANKM  473 (493)
Q Consensus       407 ~PvI~s~~~~~~~e~v~~~---------~~G~~~~~-d~~~l~~~i~~ll---~~~~~~~~~~~~~~~~~~~~~fs~~~~  473 (493)
                      +|||+++.||.+ |++.++         .+|+++++ |+++|+++|.+++   +| ++.++++++++++   +.|||+.+
T Consensus       391 ~PvI~s~~gg~~-e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll~~~~~-~~~~~~~~~~~~~---~~fs~~~~  465 (485)
T 2qzs_A          391 TLPLVRRTGGLA-DTVSDCSLENLADGVASGFVFEDSNAWSLLRAIRRAFVLWSR-PSLWRFVQRQAMA---MDFSWQVA  465 (485)
T ss_dssp             CEEEEESSHHHH-HHCCBCCHHHHHTTCCCBEEECSSSHHHHHHHHHHHHHHHTS-HHHHHHHHHHHHH---CCCCHHHH
T ss_pred             CCEEECCCCCcc-ceeccCccccccccccceEEECCCCHHHHHHHHHHHHHHcCC-HHHHHHHHHHHHh---hcCCHHHH
Confidence            999999999998 888888         89999999 9999999999999   56 8899999998874   67999999


Q ss_pred             HHHHHHHHHHHhhcc
Q 039338          474 ALAYERLFLCIKNET  488 (493)
Q Consensus       474 ~~~~~~~~~~i~~~~  488 (493)
                      +++|.++|++++.+.
T Consensus       466 ~~~~~~ly~~~~~~~  480 (485)
T 2qzs_A          466 AKSYRELYYRLKLEH  480 (485)
T ss_dssp             HHHHHHHHHHHC---
T ss_pred             HHHHHHHHHHhhhhh
Confidence            999999999987654

>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*

Probab=100.00  E-value=1e-42  Score=346.45  Aligned_cols=357  Identities=17%  Similarity=0.184  Sum_probs=262.5

Q ss_pred             CCCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCCC
Q 039338           80 SKFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEAD  159 (493)
Q Consensus        80 ~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (493)
                      .+++|||++++..+    ..||+++++.+++++|+++||+|++++.....  .. ......+.........+.+   ...
T Consensus        37 ~~~~mkIl~v~~~~----~~GG~~~~~~~l~~~L~~~G~~v~v~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~---~~~  106 (416)
T 2x6q_A           37 KLKGRSFVHVNSTS----FGGGVAEILHSLVPLLRSIGIEARWFVIEGPT--EF-FNVTKTFHNALQGNESLKL---TEE  106 (416)
T ss_dssp             TTTTCEEEEEESCS----SSSTHHHHHHHHHHHHHHTTCEEEEEECCCCH--HH-HHHHHHHHHHHTTCCSCCC---CHH
T ss_pred             hhhccEEEEEeCCC----CCCCHHHHHHHHHHHHHhCCCeEEEEEccCCc--ch-hhhhcccceeecccccccc---cHH
Confidence            56789999999863    67999999999999999999999999875432  10 0000000000000000000   000


Q ss_pred             cc-ccccchHHHHHHhcCCCCcEEEeCccch---hHHhhhccCcEEEEeccchhhhhhhhhhhhhhcCCCCccchHhHhH
Q 039338          160 KW-RYSKGWEQFDEENQREPFDVVHSESVAL---PHWLARNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKS  235 (493)
Q Consensus       160 ~~-~~~~~~~~~~~~~~~~~~DiI~~~~~~~---~~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (493)
                      .+ .+......+.+.+++.+||+||+|+...   ..++.+..| ++++.|+.....                .     ..
T Consensus       107 ~~~~~~~~~~~~~~~l~~~~~Dvv~~~~~~~~~~~~~~~~~~p-~v~~~h~~~~~~----------------~-----~~  164 (416)
T 2x6q_A          107 MKELYLNVNRENSKFIDLSSFDYVLVHDPQPAALIEFYEKKSP-WLWRCHIDLSSP----------------N-----RE  164 (416)
T ss_dssp             HHHHHHHHHHHHHHSSCGGGSSEEEEESSTTGGGGGGSCCCSC-EEEECCSCCSSC----------------C-----HH
T ss_pred             HHHHHHHHHHHHHHHHhhcCCCEEEEeccchhhHHHHHHhcCC-EEEEEccccCCc----------------c-----HH
Confidence            00 0111123344556677999999997532   222233355 999999853210                0     11


Q ss_pred             HHHHHHHHHHHHHhhccCCeEE-EcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCc---ccchhhhhhhCCCCCCc
Q 039338          236 LQGVMLKVLNEIRFFNKYAHHV-AISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDL---SLGQSFRSRIGIPKNAS  311 (493)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~d~ii-~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~---~~~~~~r~~~~i~~~~~  311 (493)
                      ....+.      +++.++|.++ ++|+...+      +++..++.+||||+|...+.+..   .....+++++++++++ 
T Consensus       165 ~~~~~~------~~~~~~~~~i~~~s~~~~~------~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~r~~~~~~~~~-  231 (416)
T 2x6q_A          165 FWEFLR------RFVEKYDRYIFHLPEYVQP------ELDRNKAVIMPPSIDPLSEKNVELKQTEILRILERFDVDPEK-  231 (416)
T ss_dssp             HHHHHH------HHHTTSSEEEESSGGGSCT------TSCTTTEEECCCCBCTTSTTTSCCCHHHHHHHHHHTTCCTTS-
T ss_pred             HHHHHH------HHHHhCCEEEEechHHHHh------hCCccceEEeCCCCChhhhcccccChhhHHHHHHHhCCCCCC-
Confidence            112121      3456788776 55555433      23457899999999987665322   2345678899998776 


Q ss_pred             EEEEEecccccccChHHHHHHHHHHHhhCCCeEEEEEeCCCc-----HHHHh----hhc--CcEEEecCC---CHHHHHH
Q 039338          312 LVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPW-----EQRYK----DFG--HQVLVMGSM---SPAELRA  377 (493)
Q Consensus       312 ~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~-----~~~~~----~l~--~~V~~~g~~---~~~~~~~  377 (493)
                      ++|+++||+.+.||++.+++|+..+.++.|+++|+|+|+|+.     .+.++    +++  ++|.|+|++   +++++.+
T Consensus       232 ~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~~~~~V~~~G~~~~~~~~~~~~  311 (416)
T 2x6q_A          232 PIITQVSRFDPWKGIFDVIEIYRKVKEKIPGVQLLLVGVMAHDDPEGWIYFEKTLRKIGEDYDVKVLTNLIGVHAREVNA  311 (416)
T ss_dssp             CEEEEECCCCTTSCHHHHHHHHHHHHHHCTTCEEEEEECCCTTCHHHHHHHHHHHHHHTTCTTEEEEEGGGTCCHHHHHH
T ss_pred             cEEEEEeccccccCHHHHHHHHHHHHHhCCCeEEEEEecCcccchhHHHHHHHHHHHhCCCCcEEEecccCCCCHHHHHH
Confidence            678899999999999999999999999889999999999864     22222    232  799999965   4789999


Q ss_pred             HHHHcCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCccceeeeCcceEEECCCHHHHHHHHHHHHHcCcHHHHHHH
Q 039338          378 FYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAPNVESLHKTLEAAVSEGPMRLAQRG  457 (493)
Q Consensus       378 ~~~~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~~d~~~l~~~i~~ll~~~~~~~~~~~  457 (493)
                      +|+.||++|+||.. ||+|++++|||+||+|||+++.++.+ |++.++.+|++++ |+++++++|.++++| ++.+++++
T Consensus       312 ~~~~ad~~v~ps~~-E~~~~~~lEAma~G~PvI~~~~~g~~-e~i~~~~~g~l~~-d~~~la~~i~~ll~~-~~~~~~~~  387 (416)
T 2x6q_A          312 FQRASDVILQMSIR-EGFGLTVTEAMWKGKPVIGRAVGGIK-FQIVDGETGFLVR-DANEAVEVVLYLLKH-PEVSKEMG  387 (416)
T ss_dssp             HHHHCSEEEECCSS-CSSCHHHHHHHHTTCCEEEESCHHHH-HHCCBTTTEEEES-SHHHHHHHHHHHHHC-HHHHHHHH
T ss_pred             HHHhCCEEEECCCc-CCCccHHHHHHHcCCCEEEccCCCCh-hheecCCCeEEEC-CHHHHHHHHHHHHhC-HHHHHHHH
Confidence            99999999999965 99999999999999999999999988 8999999999999 999999999999998 99999999


Q ss_pred             HHHHHHHHHhcCHHHHHHHHHHHHHHHh
Q 039338          458 EACRQYAASMFTANKMALAYERLFLCIK  485 (493)
Q Consensus       458 ~~~~~~~~~~fs~~~~~~~~~~~~~~i~  485 (493)
                      +++++.+.+.|+|+.+++++.++|++++
T Consensus       388 ~~a~~~~~~~fs~~~~~~~~~~~~~~l~  415 (416)
T 2x6q_A          388 AKAKERVRKNFIITKHMERYLDILNSLG  415 (416)
T ss_dssp             HHHHHHHHHHTBHHHHHHHHHHHHHTC-
T ss_pred             HHHHHHHHHHcCHHHHHHHHHHHHHHhh
Confidence            9999999988999999999999999875

>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*

Probab=100.00  E-value=5.6e-42  Score=347.95  Aligned_cols=395  Identities=16%  Similarity=0.208  Sum_probs=261.0

Q ss_pred             CCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCcc-ccCCC-----------CCCCCC
Q 039338           81 KFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISH-QENDD-----------GSNNKY  148 (493)
Q Consensus        81 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~-~~~~~-----------~~~~~~  148 (493)
                      .+.|||++|+.+++|....||.+.++..|.++|+++||+|.|+++....+....... ...+.           .....+
T Consensus         7 ~~~MkIl~vs~E~~P~~K~GGLadvv~~L~~aL~~~G~~V~Vi~P~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g   86 (536)
T 3vue_A            7 HHHMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPRYDQYKDAWDTSVVAEIKVADRYERVRFFHCYKRG   86 (536)
T ss_dssp             -CCCEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCSCCTTCEEEEEEEEEEETTEEEEEEEEECEETT
T ss_pred             CCCcEEEEEEEeccchhccCcHHHHHHHHHHHHHHcCCeEEEEecCchhhhhhcccceEEEEEecCceEEEEEEEEEECC
Confidence            458999999999877677899999999999999999999999997665422211000 00000           000011


Q ss_pred             CceEeecCCCC-----------cc------ccc---cch----HHHHH---Hh----------cCCCCcEEEeCcc--c-
Q 039338          149 PLLHFHEGEAD-----------KW------RYS---KGW----EQFDE---EN----------QREPFDVVHSESV--A-  188 (493)
Q Consensus       149 ~~~~~~~~~~~-----------~~------~~~---~~~----~~~~~---~~----------~~~~~DiI~~~~~--~-  188 (493)
                      ..++++.....           .+      .+.   ..+    +...+   .+          ....+||+|+|.+  + 
T Consensus        87 v~~y~id~~~~~~r~~~~~~~~~Y~~~~~~~~~d~~~rf~~f~~a~l~~~~~l~~~~~~~~~~~~~~ddIiH~hDW~t~l  166 (536)
T 3vue_A           87 VDRVFIDHPSFLEKVWGKTGEKIYGPDTGVDYKDNQMRFSLLCQAALEAPRILNLNNNPYFKGTYGEDVVFVCNDWHTGP  166 (536)
T ss_dssp             EEEEEEECTTTTCC------------------CHHHHHHHHHHHHHHHHHHHCCCCCCTTCCSCCCSCEEEEEESGGGST
T ss_pred             ceEEEecChhhhccccccCCCcccCCCccCccchHHHHHHHHHHHHHHHHHHhccccchhhhccCCCCEEEEECcchHHH
Confidence            11111111000           00      000   000    11111   11          1235678889865  2 


Q ss_pred             hhHHhh---------hccCcEEEEeccchhhhhhhh-hhhhhhcCCCCccch-HhHhHHHHHH--HHHHHHHHhhccCCe
Q 039338          189 LPHWLA---------RNVTNLAVSWHGIALESLQSG-IFQDLTRKPLEPMSL-AFNKSLQGVM--LKVLNEIRFFNKYAH  255 (493)
Q Consensus       189 ~~~~~~---------~~~p~~v~~~h~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~d~  255 (493)
                      ++.++.         +.+| ++.|+|+..+...... ..... ..+...... .+........  ...-.++..+..||.
T Consensus       167 ~~~~l~~~~~~~~~~~~~~-~V~TiHnl~~qg~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~n~~k~~i~~ad~  244 (536)
T 3vue_A          167 LASYLKNNYQPNGIYRNAK-VAFCIHNISYQGRFAFEDYPEL-NLSERFRSSFDFIDGYDTPVEGRKINWMKAGILEADR  244 (536)
T ss_dssp             HHHHHHHHTTTTTSSTTCE-EEEEESCTTCCCEEEGGGGGGG-CCCGGGHHHHEEEETTTSTTCEEEEEHHHHHHHHCSE
T ss_pred             HHHHHHHhhhhhhhhcccc-eeeeecCcccccccchhhhhhc-CCchhhcchhhhhhcccccccccchhHHHHHHHhccE
Confidence            222222         1345 9999998654321110 00000 000000000 0000000000  000011244668999


Q ss_pred             EEEcChhHHHHHHHHhC--------CCCCcEEEecCCccCCCccCCccc------------------chhhhhhhCCCCC
Q 039338          256 HVAISDSCGEMLRDVYQ--------IPSERVHVILNGINENEYGVDLSL------------------GQSFRSRIGIPKN  309 (493)
Q Consensus       256 ii~~S~~~~~~~~~~~~--------~~~~~v~vi~ngvd~~~~~~~~~~------------------~~~~r~~~~i~~~  309 (493)
                      |+++|+..++.+.+.++        ....++.+|+||||.+.|.+..+.                  +..+++.+|++.+
T Consensus       245 v~tVS~~~a~ei~~~~~~g~~l~~~~~~~~i~~I~NGiD~~~~~p~~d~~~~~~~~~~~~~~~K~~~k~~l~~~~gl~~d  324 (536)
T 3vue_A          245 VLTVSPYYAEELISGIARGCELDNIMRLTGITGIVNGMDVSEWDPSKDKYITAKYDATTAIEAKALNKEALQAEAGLPVD  324 (536)
T ss_dssp             EEESCHHHHHHHHTTCCCCSSSCCCSCCCSCEECCCCCCTTTSCTTTCSSSSCCCCTTTHHHHHHHHHHHHHHHTTSCCC
T ss_pred             EEEcCHHHhhhhhcccccccccccccccCCeEEEECCcchhhcCCCCccccccccchhhhhhhhHHHHHHHHHhcCCCCC
Confidence            99999999998877553        235689999999999999875321                  2445667787643


Q ss_pred             -CcEEEEEecccccccChHHHHHHHHHHHhhCCCeEEEEEeCCCcHH--HH----hhhcCcEEEecCCCHHHHHHHHHHc
Q 039338          310 -ASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQ--RY----KDFGHQVLVMGSMSPAELRAFYNAI  382 (493)
Q Consensus       310 -~~~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~--~~----~~l~~~V~~~g~~~~~~~~~~~~~a  382 (493)
                       +.++|+|+||+.++||++.+++|+.++.++  +.+++++|.|+...  .+    ..+..+|.+.+..+.+++..+|+.|
T Consensus       325 ~~~p~i~~vgRl~~~Kg~~~li~a~~~l~~~--~~~l~l~G~G~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~a  402 (536)
T 3vue_A          325 RKIPLIAFIGRLEEQKGPDVMAAAIPELMQE--DVQIVLLGTGKKKFEKLLKSMEEKYPGKVRAVVKFNAPLAHLIMAGA  402 (536)
T ss_dssp             TTSCEEEEECCBSGGGCHHHHHHHHHHHTTS--SCEEEEECCBCHHHHHHHHHHHHHSTTTEEEECSCCHHHHHHHHHHC
T ss_pred             CCCcEEEEEeeccccCChHHHHHHHHHhHhh--CCeEEEEeccCchHHHHHHHHHhhcCCceEEEEeccHHHHHHHHHhh
Confidence             236888999999999999999999999874  66888988876432  22    2234899999999999999999999


Q ss_pred             CEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCccceeeeCcceE----------EECC-CHHHHHHHHHHHHH--cC
Q 039338          383 DIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGF----------MFAP-NVESLHKTLEAAVS--EG  449 (493)
Q Consensus       383 dv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~----------~~~~-d~~~l~~~i~~ll~--~~  449 (493)
                      |++|+||.+ |+||++++|||+||+|||+++.||++ |+|.++.+|+          ++++ |+++|+++|.++++  + 
T Consensus       403 D~~v~PS~~-E~fgl~~lEAma~G~PvI~s~~gG~~-e~V~dg~~G~~~~~~~~~g~l~~~~d~~~la~ai~ral~~~~-  479 (536)
T 3vue_A          403 DVLAVPSRF-EPCGLIQLQGMRYGTPCACASTGGLV-DTVIEGKTGFHMGRLSVDCKVVEPSDVKKVAATLKRAIKVVG-  479 (536)
T ss_dssp             SEEEECCSC-CSSCSHHHHHHHTTCCEEECSCTHHH-HHCCBTTTEEECCCCCSCTTCCCHHHHHHHHHHHHHHHHHTT-
T ss_pred             heeeccccc-CCCCHHHHHHHHcCCCEEEcCCCCch-heeeCCCCccccccCCCceeEECCCCHHHHHHHHHHHHHhcC-
Confidence            999999965 99999999999999999999999999 9999999998          6677 89999999999887  4 


Q ss_pred             cHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHh
Q 039338          450 PMRLAQRGEACRQYAASMFTANKMALAYERLFLCIK  485 (493)
Q Consensus       450 ~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~i~  485 (493)
                      .+.++++++++   ++++|||++.+++|+++|+++.
T Consensus       480 ~~~~~~~~~~a---m~~~fSW~~~A~~y~~ly~~L~  512 (536)
T 3vue_A          480 TPAYEEMVRNC---MNQDLSWKGPAKNWENVLLGLG  512 (536)
T ss_dssp             SHHHHHHHHHH---HHSCCSSHHHHHHHHHHHHTTC
T ss_pred             cHHHHHHHHHH---HHhcCCHHHHHHHHHHHHHHhh
Confidence            44556665554   5577999999999999999974

>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*

Probab=100.00  E-value=1.1e-41  Score=334.15  Aligned_cols=354  Identities=19%  Similarity=0.224  Sum_probs=263.4

Q ss_pred             eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCCC--cc
Q 039338           84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEAD--KW  161 (493)
Q Consensus        84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~  161 (493)
                      |||++++..+++   .||+++++.+++++|+++||+|++++.....  ..           . ....+........  ..
T Consensus         1 MkIl~i~~~~~~---~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~--~~-----------~-~~~~v~~~~~~~~~~~~   63 (374)
T 2iw1_A            1 MIVAFCLYKYFP---FGGLQRDFMRIASTVAARGHHVRVYTQSWEG--DC-----------P-KAFELIQVPVKSHTNHG   63 (374)
T ss_dssp             -CEEEECSEECT---TCHHHHHHHHHHHHHHHTTCCEEEEESEECS--CC-----------C-TTCEEEECCCCCSSHHH
T ss_pred             CeEEEEEeecCC---CcchhhHHHHHHHHHHhCCCeEEEEecCCCC--CC-----------C-CCcEEEEEccCcccchh
Confidence            899999998753   5999999999999999999999999976433  10           0 1112222221111  11


Q ss_pred             ccccchHHHHHHhcCCCCcEEEeCccchhH--Hhhhc---cCcEEEEeccchhhhhhhhhhhhhhcCCCCccchHhHhHH
Q 039338          162 RYSKGWEQFDEENQREPFDVVHSESVALPH--WLARN---VTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSL  236 (493)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~DiI~~~~~~~~~--~~~~~---~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (493)
                      ........+.+.+++.+||+||+++.....  .....   .+ .+.+.|+...         ...          .....
T Consensus        64 ~~~~~~~~l~~~i~~~~~Dvv~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---------~~~----------~~~~~  123 (374)
T 2iw1_A           64 RNAEYYAWVQNHLKEHPADRVVGFNKMPGLDVYFAADVCYAE-KVAQEKGFLY---------RLT----------SRYRH  123 (374)
T ss_dssp             HHHHHHHHHHHHHHHSCCSEEEESSCCTTCSEEECCSCCHHH-HHHHHCCHHH---------HTS----------HHHHH
T ss_pred             hHHHHHHHHHHHHhccCCCEEEEecCCCCceeeeccccccce-eeeecccchh---------hhc----------HHHHH
Confidence            122233456666677899999998642211  11100   01 1111122100         000          00011


Q ss_pred             HHHHHHHHHHHHhh--ccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcc--cchhhhhhhCCCCCCcE
Q 039338          237 QGVMLKVLNEIRFF--NKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLS--LGQSFRSRIGIPKNASL  312 (493)
Q Consensus       237 ~~~~~~~~~~~~~~--~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~--~~~~~r~~~~i~~~~~~  312 (493)
                      ...+     +...+  +.+|.++++|+..++.+.+.+|++..++.++|||+|.+.+.+...  .+..++++++++++. +
T Consensus       124 ~~~~-----~~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~~~~~~vi~ngv~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  197 (374)
T 2iw1_A          124 YAAF-----ERATFEQGKSTKLMMLTDKQIADFQKHYQTEPERFQILPPGIYPDRKYSEQIPNSREIYRQKNGIKEQQ-N  197 (374)
T ss_dssp             HHHH-----HHHHHSTTCCCEEEESCHHHHHHHHHHHCCCGGGEEECCCCCCGGGSGGGSCTTHHHHHHHHTTCCTTC-E
T ss_pred             HHHH-----HHHHhhccCCcEEEEcCHHHHHHHHHHhCCChhheEEecCCcCHHhcCcccchhHHHHHHHHhCCCCCC-e
Confidence            1111     11233  379999999999999999988988889999999999988765432  245688999998776 7


Q ss_pred             EEEEecccccccChHHHHHHHHHHHhh-CCCeEEEEEeCCCcHH---HHhhh--cCcEEEecCCCHHHHHHHHHHcCEEE
Q 039338          313 VLGVAGRLVKDKGHPLLHEAFSKLMVK-YPDVYLIVAGSGPWEQ---RYKDF--GHQVLVMGSMSPAELRAFYNAIDIFV  386 (493)
Q Consensus       313 ~i~~~Gr~~~~Kg~~~ll~a~~~l~~~-~~~~~l~i~G~g~~~~---~~~~l--~~~V~~~g~~~~~~~~~~~~~adv~v  386 (493)
                      +++++|++.+.||++.+++++..+.++ .++++|+++|+|+..+   ..+++  .++|.|+|+.  +++.++|+.||++|
T Consensus       198 ~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~v~~~g~~--~~~~~~~~~ad~~v  275 (374)
T 2iw1_A          198 LLLQVGSDFGRKGVDRSIEALASLPESLRHNTLLFVVGQDKPRKFEALAEKLGVRSNVHFFSGR--NDVSELMAAADLLL  275 (374)
T ss_dssp             EEEEECSCTTTTTHHHHHHHHHTSCHHHHHTEEEEEESSSCCHHHHHHHHHHTCGGGEEEESCC--SCHHHHHHHCSEEE
T ss_pred             EEEEeccchhhcCHHHHHHHHHHhHhccCCceEEEEEcCCCHHHHHHHHHHcCCCCcEEECCCc--ccHHHHHHhcCEEE
Confidence            888999999999999999999999776 5789999999987532   22223  3799999985  78999999999999


Q ss_pred             eCCCCCCCCChHHHHHHHcCCcEEecCCCCCccceeeeCcceEEEC-C-CHHHHHHHHHHHHHcCcHHHHHHHHHHHHHH
Q 039338          387 NPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFA-P-NVESLHKTLEAAVSEGPMRLAQRGEACRQYA  464 (493)
Q Consensus       387 ~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~-~-d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~  464 (493)
                      +||. .|++|++++|||++|+|||+++.++.. |++.++.+|++++ + |+++++++|.+++++ ++.++++++++++.+
T Consensus       276 ~ps~-~e~~~~~~~Ea~a~G~Pvi~~~~~~~~-e~i~~~~~g~~~~~~~~~~~l~~~i~~l~~~-~~~~~~~~~~~~~~~  352 (374)
T 2iw1_A          276 HPAY-QEAAGIVLLEAITAGLPVLTTAVCGYA-HYIADANCGTVIAEPFSQEQLNEVLRKALTQ-SPLRMAWAENARHYA  352 (374)
T ss_dssp             ECCS-CCSSCHHHHHHHHHTCCEEEETTSTTT-HHHHHHTCEEEECSSCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHH
T ss_pred             eccc-cCCcccHHHHHHHCCCCEEEecCCCch-hhhccCCceEEeCCCCCHHHHHHHHHHHHcC-hHHHHHHHHHHHHHH
Confidence            9996 499999999999999999999999998 8899999999998 7 999999999999998 999999999999999


Q ss_pred             HHhcCHHHHHHHHHHHHHHHhh
Q 039338          465 ASMFTANKMALAYERLFLCIKN  486 (493)
Q Consensus       465 ~~~fs~~~~~~~~~~~~~~i~~  486 (493)
                      ++ ++|+..++++.++++..++
T Consensus       353 ~~-~~~~~~~~~~~~~l~~~l~  373 (374)
T 2iw1_A          353 DT-QDLYSLPEKAADIITGGLD  373 (374)
T ss_dssp             HH-SCCSCHHHHHHHHHHCC--
T ss_pred             HH-hhHHHHHHHHHHHHHHhhc
Confidence            87 7999999999999886553

>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*

Probab=100.00  E-value=7.4e-41  Score=349.93  Aligned_cols=387  Identities=16%  Similarity=0.134  Sum_probs=267.3

Q ss_pred             CCceEEEEEeccCC-------CCCCCCchHHHHHH--------HHHHHHhCCCEEE----EEecCCCCCCCCCCccccCC
Q 039338           81 KFTLKIAVFSRKWP-------ISTTPGGMERHAHT--------LHVALARRGHRVH----IFTSPVDNINSPSISHQEND  141 (493)
Q Consensus        81 ~~~mkIl~v~~~~p-------~~~~~gG~~~~~~~--------l~~~L~~~G~~V~----v~~~~~~~~~~~~~~~~~~~  141 (493)
                      ++.|+|++++.+.=       ..+..||...++.+        |++.|+++||+|+    |+|.....  ..........
T Consensus       276 ~~~~~i~~is~hg~~~~~~~lG~~dtGGq~vyV~e~~~al~~ela~~L~~~G~~V~~~V~v~Tr~~~~--~~g~~y~~~~  353 (816)
T 3s28_A          276 PMVFNVVILSPHGYFAQDNVLGYPDTGGQVVYILDQVRALEIEMLQRIKQQGLNIKPRILILTRLLPD--AVGTTCGERL  353 (816)
T ss_dssp             CCCCEEEEECCSSCCCSSSCTTSTTCSHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECCTT--CTTSSTTSSE
T ss_pred             CceeEEEEEcCCcccCccccCCCCCCCCceeeHHHHHHHHHHHHHHHHHHCCCccceeeEEEeCCCCC--CCCCccCCcc
Confidence            45789999998541       01478999999984        6667778999886    88877554  2111111110


Q ss_pred             CCCC-CCCCceEeecCCC------------Cccccccch--HHHHHHh--cCCCCcEEEeCcc--chhHH---hhhccCc
Q 039338          142 DGSN-NKYPLLHFHEGEA------------DKWRYSKGW--EQFDEEN--QREPFDVVHSESV--ALPHW---LARNVTN  199 (493)
Q Consensus       142 ~~~~-~~~~~~~~~~~~~------------~~~~~~~~~--~~~~~~~--~~~~~DiI~~~~~--~~~~~---~~~~~p~  199 (493)
                      .... .....+...+..+            ..+.+...+  ..+...+  ...+|||||+|..  .+.++   ...++| 
T Consensus       354 e~i~~~~gv~I~RvP~~~~~g~l~~~l~k~~L~~~L~~F~~~~l~~il~~~~~~PDVIHsH~~~sglva~llar~~gvP-  432 (816)
T 3s28_A          354 ERVYDSEYCDILRVPFRTEKGIVRKWISRFEVWPYLETYTEDAAVELSKELNGKPDLIIGNYSDGNLVASLLAHKLGVT-  432 (816)
T ss_dssp             EECTTCSSEEEEEECEEETTEEECSCCCTTTCGGGHHHHHHHHHHHHHHHCSSCCSEEEEEHHHHHHHHHHHHHHHTCC-
T ss_pred             eeecCcCCeEEEEecCCCccccccccccHHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEeCCchHHHHHHHHHHHcCCC-
Confidence            0010 1111222221111            011111111  1122222  2458999999964  22222   223568 


Q ss_pred             EEEEeccchhhhhhhhhhhhhhcCCCCccchHhHhHHHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHH---hC----
Q 039338          200 LAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDV---YQ----  272 (493)
Q Consensus       200 ~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~---~~----  272 (493)
                      ++.+.|+.........           ..........+....+...+...++.+|.|+++|+..++.+.+.   |+    
T Consensus       433 ~V~T~Hsl~~~k~~~~-----------~~~~~~~~~~y~~~~r~~aE~~~l~~AD~VIa~S~~~~~~l~~~~~~y~~~~~  501 (816)
T 3s28_A          433 QCTIAHALEKTKYPDS-----------DIYWKKLDDKYHFSCQFTADIFAMNHTDFIITSTFQEIAGSKETVGQYESHTA  501 (816)
T ss_dssp             EEEECSCCHHHHSTTT-----------TTTHHHHHHHHCHHHHHHHHHHHHHHSSEEEESCHHHHHCCSSSCCTTGGGSS
T ss_pred             EEEEEecccccccccc-----------cchhhhHHHHHHHHHHHHHHHHHHHhCCEEEECCHHHHHHHHHHHHHhhhhhc
Confidence            9999998754321100           00000001112222333345567899999999999988853221   11    


Q ss_pred             --------------CCCCcEEEecCCccCCCccCCcccch-----------------hhhhhhCC--CCCCcEEEEEecc
Q 039338          273 --------------IPSERVHVILNGINENEYGVDLSLGQ-----------------SFRSRIGI--PKNASLVLGVAGR  319 (493)
Q Consensus       273 --------------~~~~~v~vi~ngvd~~~~~~~~~~~~-----------------~~r~~~~i--~~~~~~~i~~~Gr  319 (493)
                                    ...+++.|||||+|.+.|.+......                 ..++.+|+  +.++ ++|+|+||
T Consensus       502 ~~~p~Lyr~~~gI~~~~~ki~VIpnGVD~~~F~P~~~~~~Rl~~~~~~i~~~l~~p~~~r~~lg~l~~~~~-~vIl~vGR  580 (816)
T 3s28_A          502 FTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLTKFHSEIEELLYSDVENKEHLCVLKDKKK-PILFTMAR  580 (816)
T ss_dssp             EEETTTEEEEESCCTTCTTEEECCCCCCTTTSCCTTCTTTCCGGGHHHHHHHHHCSCCBTTEESCBSCTTS-CEEEEECC
T ss_pred             cccchhhhcccccccCCCCEEEECCCcCHHHcCccchhhhhhhhccccccccccchhhHHHHhcccCCCCC-eEEEEEcc
Confidence                          12239999999999999877543221                 33455666  4444 78889999


Q ss_pred             cccccChHHHHHHHHHHHhhCCCeEEEEEeCCC-----------cHHHHhh----h--cCcEEEecCCC----HHHHHHH
Q 039338          320 LVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGP-----------WEQRYKD----F--GHQVLVMGSMS----PAELRAF  378 (493)
Q Consensus       320 ~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~-----------~~~~~~~----l--~~~V~~~g~~~----~~~~~~~  378 (493)
                      +.+.||++.+++|+..+.+..++++|+|+|+|+           ..+.+++    +  .++|.|+|+++    .+++..+
T Consensus       581 l~~~KGid~LIeA~~~L~~~~~~v~LvIvG~g~~~~~~~~e~~~~~~~L~~li~~lgL~~~V~flG~~~~~v~~~eL~~~  660 (816)
T 3s28_A          581 LDRVKNLSGLVEWYGKNTRLRELANLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWISSQMDRVRNGELYRY  660 (816)
T ss_dssp             CCTTTTHHHHHHHHHHCHHHHHHCEEEEECCCTTSCCCCHHHHHHHHHHHHHHHHTTCBBBEEEECCCCCHHHHHHHHHH
T ss_pred             CcccCCHHHHHHHHHHHHhhCCCeEEEEEeCCCcccccchhhHHHHHHHHHHHHHcCCCCcEEEccCccccCCHHHHHHH
Confidence            999999999999999998877899999999988           2233332    2  28999999654    5889999


Q ss_pred             HH-HcCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCccceeeeCcceEEECC-CHHHHHHHHHHHH----HcCcHH
Q 039338          379 YN-AIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAP-NVESLHKTLEAAV----SEGPMR  452 (493)
Q Consensus       379 ~~-~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~~-d~~~l~~~i~~ll----~~~~~~  452 (493)
                      |+ ++|++|+||.. |+||++++|||+||+|||+|+.||.. |++.++.+|+++++ |+++++++|.+++    .| ++.
T Consensus       661 ~~~aaDvfV~PS~~-EgfglvllEAMA~G~PVIasd~GG~~-EiV~dg~~Gllv~p~D~e~LA~aI~~lL~~Ll~d-~~~  737 (816)
T 3s28_A          661 ICDTKGAFVQPALY-EAFGLTVVEAMTCGLPTFATCKGGPA-EIIVHGKSGFHIDPYHGDQAADTLADFFTKCKED-PSH  737 (816)
T ss_dssp             HHHTTCEEEECCSC-BSSCHHHHHHHHTTCCEEEESSBTHH-HHCCBTTTBEEECTTSHHHHHHHHHHHHHHHHHC-THH
T ss_pred             HHhcCeEEEECCCc-cCccHHHHHHHHcCCCEEEeCCCChH-HHHccCCcEEEeCCCCHHHHHHHHHHHHHHhccC-HHH
Confidence            98 57999999965 99999999999999999999999998 99999999999999 9999999997776    77 899


Q ss_pred             HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHh
Q 039338          453 LAQRGEACRQYAASMFTANKMALAYERLFLCIK  485 (493)
Q Consensus       453 ~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~i~  485 (493)
                      ++++++++++++.+.|||+.+++++.++|+...
T Consensus       738 ~~~m~~~ar~~a~~~fSwe~~a~~ll~lY~~~g  770 (816)
T 3s28_A          738 WDEISKGGLQRIEEKYTWQIYSQRLLTLTGVYG  770 (816)
T ss_dssp             HHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHh
Confidence            999999999999889999999999999998753

>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*

Probab=100.00  E-value=3.7e-41  Score=326.19  Aligned_cols=312  Identities=17%  Similarity=0.149  Sum_probs=249.0

Q ss_pred             CCceEEEEEecc-----------CCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCC
Q 039338           81 KFTLKIAVFSRK-----------WPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYP  149 (493)
Q Consensus        81 ~~~mkIl~v~~~-----------~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (493)
                      |++|||++++..           ||+ ...||+++++..++++|+++||+|++++.....  ..              ..
T Consensus         1 M~~mkIl~v~~~~~~~~~~~~~p~~p-~~~gG~~~~~~~l~~~L~~~G~~v~v~~~~~~~--~~--------------~~   63 (342)
T 2iuy_A            1 MRPLKVALVNIPLRVPGSDAWISVPP-QGYGGIQWVVANLMDGLLELGHEVFLLGAPGSP--AG--------------RP   63 (342)
T ss_dssp             --CCEEEEECCCCBCTTSSSBCCSSC-SSSCHHHHHHHHHHHHHHHTTCEEEEESCTTSC--CC--------------ST
T ss_pred             CCccEEEEEeccccccCcccccccCc-ccCChHHHHHHHHHHHHHHcCCeEEEEecCCCC--CC--------------CC
Confidence            456999999998           343 256999999999999999999999999987654  11              01


Q ss_pred             ceEeecCCCCccccccchHHHHHHhcCCCCcEEEeCccchhHHh--hhccCcEEEEeccchhhhhhhhhhhhhhcCCCCc
Q 039338          150 LLHFHEGEADKWRYSKGWEQFDEENQREPFDVVHSESVALPHWL--ARNVTNLAVSWHGIALESLQSGIFQDLTRKPLEP  227 (493)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DiI~~~~~~~~~~~--~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~  227 (493)
                      .+......        .+..+.+.+++.+||+||+|+.....+.  ..+.|  ++++|+.....                
T Consensus        64 ~~~~~~~~--------~~~~l~~~l~~~~~Dvi~~~~~~~~~~~~~~~~~p--v~~~h~~~~~~----------------  117 (342)
T 2iuy_A           64 GLTVVPAG--------EPEEIERWLRTADVDVVHDHSGGVIGPAGLPPGTA--FISSHHFTTRP----------------  117 (342)
T ss_dssp             TEEECSCC--------SHHHHHHHHHHCCCSEEEECSSSSSCSTTCCTTCE--EEEEECSSSBC----------------
T ss_pred             cceeccCC--------cHHHHHHHHHhcCCCEEEECCchhhHHHHhhcCCC--EEEecCCCCCc----------------
Confidence            12222111        1236666677779999999976432222  22344  88999864310                


Q ss_pred             cchHhHhHHHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCCC
Q 039338          228 MSLAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIP  307 (493)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~  307 (493)
                                             ..+|.++++|+..++.+.+     ..++.+||||+|.+.+.+....         . 
T Consensus       118 -----------------------~~~d~ii~~S~~~~~~~~~-----~~~~~vi~ngvd~~~~~~~~~~---------~-  159 (342)
T 2iuy_A          118 -----------------------VNPVGCTYSSRAQRAHCGG-----GDDAPVIPIPVDPARYRSAADQ---------V-  159 (342)
T ss_dssp             -----------------------SCCTTEEESCHHHHHHTTC-----CTTSCBCCCCBCGGGSCCSTTC---------C-
T ss_pred             -----------------------ccceEEEEcCHHHHHHHhc-----CCceEEEcCCCChhhcCccccc---------C-
Confidence                                   1289999999999998865     4689999999998877654321         1 


Q ss_pred             CCCcEEEEEecccccccChHHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhhh----cCcEEEecCCCHHHHHHHHHHcC
Q 039338          308 KNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDF----GHQVLVMGSMSPAELRAFYNAID  383 (493)
Q Consensus       308 ~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~l----~~~V~~~g~~~~~~~~~~~~~ad  383 (493)
                      .++ .+|+|+||+.+.||++.++++++.+     +++|+++|+|+..+.++++    +++|.|+|+++++++.++|++||
T Consensus       160 ~~~-~~i~~vG~~~~~Kg~~~li~a~~~~-----~~~l~i~G~g~~~~~l~~~~~~~~~~v~~~g~~~~~~l~~~~~~ad  233 (342)
T 2iuy_A          160 AKE-DFLLFMGRVSPHKGALEAAAFAHAC-----GRRLVLAGPAWEPEYFDEITRRYGSTVEPIGEVGGERRLDLLASAH  233 (342)
T ss_dssp             CCC-SCEEEESCCCGGGTHHHHHHHHHHH-----TCCEEEESCCCCHHHHHHHHHHHTTTEEECCCCCHHHHHHHHHHCS
T ss_pred             CCC-CEEEEEeccccccCHHHHHHHHHhc-----CcEEEEEeCcccHHHHHHHHHHhCCCEEEeccCCHHHHHHHHHhCC
Confidence            223 4688999999999999999999987     7899999999877666553    48999999999999999999999


Q ss_pred             EEEeCCC---------CCCCCChHHHHHHHcCCcEEecCCCCCccceeee--CcceEEECCCHHHHHHHHHHHHHcCcHH
Q 039338          384 IFVNPTL---------RPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVD--DEFGFMFAPNVESLHKTLEAAVSEGPMR  452 (493)
Q Consensus       384 v~v~ps~---------~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~--~~~G~~~~~d~~~l~~~i~~ll~~~~~~  452 (493)
                      ++|+||.         +.|++|++++|||++|+|||+++.++.. |++.+  +.+|+++++|+++++++|.++++     
T Consensus       234 v~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~~~~-e~~~~~~~~~g~~~~~d~~~l~~~i~~l~~-----  307 (342)
T 2iuy_A          234 AVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNGCLA-EIVPSVGEVVGYGTDFAPDEARRTLAGLPA-----  307 (342)
T ss_dssp             EEEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTTTHH-HHGGGGEEECCSSSCCCHHHHHHHHHTSCC-----
T ss_pred             EEEECCcccccccccccccCccHHHHHHHhcCCCEEEcCCCChH-HHhcccCCCceEEcCCCHHHHHHHHHHHHH-----
Confidence            9999996         2599999999999999999999999998 89988  88999998899999999998865     


Q ss_pred             HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhccc
Q 039338          453 LAQRGEACRQYAASMFTANKMALAYERLFLCIKNETF  489 (493)
Q Consensus       453 ~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~i~~~~~  489 (493)
                          ++++++++.+.|+|+.+++++.++|+++++++.
T Consensus       308 ----~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~  340 (342)
T 2iuy_A          308 ----SDEVRRAAVRLWGHVTIAERYVEQYRRLLAGAT  340 (342)
T ss_dssp             ----HHHHHHHHHHHHBHHHHHHHHHHHHHHHHTTCC
T ss_pred             ----HHHHHHHHHHhcCHHHHHHHHHHHHHHHHccCC
Confidence                578888988889999999999999999987653

>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*

Probab=100.00  E-value=1.3e-38  Score=314.02  Aligned_cols=347  Identities=12%  Similarity=0.041  Sum_probs=229.9

Q ss_pred             CCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCC-CC
Q 039338           81 KFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGE-AD  159 (493)
Q Consensus        81 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  159 (493)
                      .++|||++++..|+|....||. +.+.+++++|+++||+|+|++.....  ..  .....+       ......... ..
T Consensus        44 ~~~mrI~~v~~~~~p~~~~GG~-~~v~~la~~L~~~GheV~Vvt~~~~~--~~--~~~~~~-------~~~~~~~~~~~~  111 (413)
T 2x0d_A           44 IKGKRLNLLVPSINQEHMFGGI-STALKLFEQFDNKKFKKRIILTDATP--NP--KDLQSF-------KSFKYVMPEEDK  111 (413)
T ss_dssp             CCSCEEEEEESCCCGGGCSHHH-HHHHHHHTTSCTTTCEEEEEESSCCC--CH--HHHGGG-------TTSEECCTTCCC
T ss_pred             CCCceEEEEeCCCCccccccHH-HHHHHHHHHHHHcCCceEEEEecCCC--Ch--HHHHhh-------hccceeeccCCc
Confidence            4679999999998763234554 56899999999999999999986432  10  000000       000000000 00


Q ss_pred             c--cccccchHHHHHHhcCCCCcEEEeCccchhHHhhh------------ccCcEEEEeccchhhhhhhhhhhhhhcCCC
Q 039338          160 K--WRYSKGWEQFDEENQREPFDVVHSESVALPHWLAR------------NVTNLAVSWHGIALESLQSGIFQDLTRKPL  225 (493)
Q Consensus       160 ~--~~~~~~~~~~~~~~~~~~~DiI~~~~~~~~~~~~~------------~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~  225 (493)
                      .  .........+.......++|+||+++.........            ..+ .+..+|+++....           +.
T Consensus       112 ~~~~~i~~~~~~~~~~~~~~~~Dvv~a~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~-----------~~  179 (413)
T 2x0d_A          112 DFALQIVPFNDRYNRTIPVAKHDIFIATAWWTAYAAQRIVSWQSDTYGIPPNK-ILYIIQDFEPGFY-----------QW  179 (413)
T ss_dssp             CCSEEEEECSCCTTCCEEECTTEEEEECSHHHHHHHHHHHHHHHHHHTCCCCC-EEEEECSCGGGGS-----------CS
T ss_pred             cccceeeeccccccccccCCCCCEEEEehHHHHHHHHHhhhhhhhhcccccCc-EEEEEeechhhcC-----------cc
Confidence            0  00000000011112234799999987532221111            123 6666776533210           00


Q ss_pred             CccchHhHhHHHHHHHHHHHHHHhhccCC--eEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhh
Q 039338          226 EPMSLAFNKSLQGVMLKVLNEIRFFNKYA--HHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSR  303 (493)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d--~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~  303 (493)
                               .....+     ....+..++  .++++|+.+++.+.+ +|++..++.+++||+|.+.+.+..         
T Consensus       180 ---------~~~~~~-----~~~~~~~~~~~~vi~~S~~~~~~l~~-~g~~~~~~~~i~~g~d~~~~~~~~---------  235 (413)
T 2x0d_A          180 ---------SSQYVL-----AESTYKYRGPQIAVFNSELLKQYFNN-KGYNFTDEYFFQPKINTTLKNYIN---------  235 (413)
T ss_dssp             ---------SHHHHH-----HHHTTSCCSCEEEEEESHHHHHHHHH-HTCCCSEEEEECCCCCHHHHTTTT---------
T ss_pred             ---------ChHHHH-----HHHHhccCCceEEEEcCHHHHHHHHH-cCCCCCceEEeCCCcCchhhcccc---------
Confidence                     000011     124455555  589999999999988 466667899999999876543321         


Q ss_pred             hCCCCCCcEEEEEeccc-ccccChHHHHHHHHHHHhhCCC---eEEEEEeCCCcHHHHhhhcCcEEEecCCCHHHHHHHH
Q 039338          304 IGIPKNASLVLGVAGRL-VKDKGHPLLHEAFSKLMVKYPD---VYLIVAGSGPWEQRYKDFGHQVLVMGSMSPAELRAFY  379 (493)
Q Consensus       304 ~~i~~~~~~~i~~~Gr~-~~~Kg~~~ll~a~~~l~~~~~~---~~l~i~G~g~~~~~~~~l~~~V~~~g~~~~~~~~~~~  379 (493)
                      .+ ..++ ..++++||+ .+.||++.+++|++.+.++.|+   ++|+++|+|+....+ .+.++|.|+|+++++++.++|
T Consensus       236 ~~-~~~~-~~il~~gr~~~~~Kg~~~li~A~~~l~~~~~~~~~~~l~ivG~~~~~~~l-~~~~~v~f~G~~~~~~l~~~~  312 (413)
T 2x0d_A          236 DK-RQKE-KIILVYGRPSVKRNAFTLIVEALKIFVQKYDRSNEWKIISVGEKHKDIAL-GKGIHLNSLGKLTLEDYADLL  312 (413)
T ss_dssp             SC-CCCC-SEEEEEECTTCGGGCHHHHHHHHHHHHHHCTTGGGCEEEEEESCCCCEEE-ETTEEEEEEESCCHHHHHHHH
T ss_pred             cc-cCCC-CEEEEEecCchhccCHHHHHHHHHHHHHhCCCCCceEEEEEcCCchhhhc-CCcCcEEEcCCCCHHHHHHHH
Confidence            11 1233 456688996 6889999999999999888775   899999998764211 223789999999999999999


Q ss_pred             HHcCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCccceeeeCcceEEECC-CHHHHHHHHHHHHHcCcHHHHHHHH
Q 039338          380 NAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAP-NVESLHKTLEAAVSEGPMRLAQRGE  458 (493)
Q Consensus       380 ~~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~~-d~~~l~~~i~~ll~~~~~~~~~~~~  458 (493)
                      ++||++|+||.. |+||++++||||||+|||+++ +|.. |++.++.+|+++++ |+++|+++|.++++| ++.+++   
T Consensus       313 ~~adv~v~pS~~-E~~g~~~lEAmA~G~PVV~~~-~g~~-e~v~~~~~G~lv~~~d~~~la~ai~~ll~~-~~~~~~---  385 (413)
T 2x0d_A          313 KRSSIGISLMIS-PHPSYPPLEMAHFGLRVITNK-YENK-DLSNWHSNIVSLEQLNPENIAETLVELCMS-FNNRDV---  385 (413)
T ss_dssp             HHCCEEECCCSS-SSCCSHHHHHHHTTCEEEEEC-BTTB-CGGGTBTTEEEESSCSHHHHHHHHHHHHHH-TC-------
T ss_pred             HhCCEEEEecCC-CCCCcHHHHHHhCCCcEEEeC-CCcc-hhhhcCCCEEEeCCCCHHHHHHHHHHHHcC-HHHHHH---
Confidence            999999999964 999999999999999999955 5667 88889999999999 999999999999999 666655   


Q ss_pred             HHHHHHHHhcCHHHHHHHHHHHHHHHhhc
Q 039338          459 ACRQYAASMFTANKMALAYERLFLCIKNE  487 (493)
Q Consensus       459 ~~~~~~~~~fs~~~~~~~~~~~~~~i~~~  487 (493)
                      ++++.++ .|+|++..++ .++|+++.++
T Consensus       386 ~~~~~~~-~~~W~~~~~~-~~~~~~l~~~  412 (413)
T 2x0d_A          386 DKKESSN-MMFYINEFNE-FSFIKEIEEK  412 (413)
T ss_dssp             ---CCBS-CGGGCCCC----TTHHHHHTT
T ss_pred             hHHHHHH-hCCHHHHHHH-HHHHHHHHhh
Confidence            4555554 5999999888 7777777543

>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*

Probab=100.00  E-value=6.3e-34  Score=294.49  Aligned_cols=331  Identities=16%  Similarity=0.179  Sum_probs=245.2

Q ss_pred             CCCCceEEEEEeccCCCCCCCCchHHHHHHHHHH--HHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecC
Q 039338           79 PSKFTLKIAVFSRKWPISTTPGGMERHAHTLHVA--LARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEG  156 (493)
Q Consensus        79 ~~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~--L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (493)
                      .+.++|||++++..+    ..||+++++.++++.  +.+.||+|++++..... .......      ..... .+...  
T Consensus       201 ~~~~~~rI~~~~~~~----~~~g~~~~~~~l~~~L~~~~~~~~v~~~~~~~~~-~~~~~~~------~~~~~-~~~~~--  266 (568)
T 2vsy_A          201 RSKGPLRVGFVSNGF----GAHPTGLLTVALFEALQRRQPDLQMHLFATSGDD-GSTLRTR------LAQAS-TLHDV--  266 (568)
T ss_dssp             CSSSCEEEEEEESCS----SSSHHHHHHHHHHHHHHHHCTTEEEEEEESSCCC-SCHHHHH------HHHTS-EEEEC--
T ss_pred             CCCCCeEEEEECccc----ccChHHHHHHHHHhhccCCcccEEEEEEECCCCC-ccHHHHH------HHhcC-eEEEC--
Confidence            356789999999977    458999999999999  88889999999975322 0100000      00011 11111  


Q ss_pred             CCCccccccchHHHHHHhcCCCCcEEEeCcc-----chhHHhhhccCcEEEEeccchhhhhhhhhhhhhhcCCCCccchH
Q 039338          157 EADKWRYSKGWEQFDEENQREPFDVVHSESV-----ALPHWLARNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLA  231 (493)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~DiI~~~~~-----~~~~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (493)
                      .  .    .....+.+.+++.+|||||.++.     .+..+..+..| +++++|+......       .   .       
T Consensus       267 ~--~----~~~~~l~~~i~~~~~Div~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-------~---~-------  322 (568)
T 2vsy_A          267 T--A----LGHLATAKHIRHHGIDLLFDLRGWGGGGRPEVFALRPAP-VQVNWLAYPGTSG-------A---P-------  322 (568)
T ss_dssp             T--T----CCHHHHHHHHHHTTCSEEEECSSCTTCSSCHHHHTCCSS-EEEEESSSSSCCC-------C---T-------
T ss_pred             C--C----CCHHHHHHHHHhCCCCEEEECCCCCCcchHHHHhcCCCc-eeEeeecCCcccC-------C---C-------
Confidence            1  0    12355667777889999997532     12233333446 8888887422100       0   0       


Q ss_pred             hHhHHHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCCCCCCc
Q 039338          232 FNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNAS  311 (493)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~  311 (493)
                                 .    ..+..+|.++++|+...+     |+   +++.+|||.+......+. ......|+++|++++. 
T Consensus       323 -----------~----~~~~~~d~~i~~s~~~~~-----~~---~~i~~ipn~~~~~~~~~~-~~~~~~r~~~~~~~~~-  377 (568)
T 2vsy_A          323 -----------W----MDYVLGDAFALPPALEPF-----YS---EHVLRLQGAFQPSDTSRV-VAEPPSRTQCGLPEQG-  377 (568)
T ss_dssp             -----------T----CCEEEECTTTSCTTTGGG-----CS---SEEEECSSCSCCCCTTCC-CCCCCCTGGGTCCTTS-
T ss_pred             -----------C----ceEEEECCCcCCcccccC-----Cc---ceeEcCCCcCCCCCCCCC-CCCCCCccccCCCCCC-
Confidence                       0    012346788888886543     32   789999996544321111 1223468889998765 


Q ss_pred             EEEEEecccccccChHHHHHHHHHHHhhCCCeEEEEEe-CCCcHHHHhh----h--c-CcEEEecCCCHHHHHHHHHHcC
Q 039338          312 LVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAG-SGPWEQRYKD----F--G-HQVLVMGSMSPAELRAFYNAID  383 (493)
Q Consensus       312 ~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G-~g~~~~~~~~----l--~-~~V~~~g~~~~~~~~~~~~~ad  383 (493)
                      +++ ++|++.+ ||++.+++++.++.++.|+++|+|+| +|+..+.+++    +  . ++|.|+|+++++++.++|+.||
T Consensus       378 ~v~-~~g~~~~-K~~~~li~a~~~l~~~~~~~~l~i~G~~g~~~~~l~~~~~~~~l~~~~v~~~g~~~~~~~~~~~~~ad  455 (568)
T 2vsy_A          378 VVL-CCFNNSY-KLNPQSMARMLAVLREVPDSVLWLLSGPGEADARLRAFAHAQGVDAQRLVFMPKLPHPQYLARYRHAD  455 (568)
T ss_dssp             CEE-EECCCGG-GCCHHHHHHHHHHHHHCTTCEEEEECCSTTHHHHHHHHHHHTTCCGGGEEEECCCCHHHHHHHGGGCS
T ss_pred             EEE-EeCCccc-cCCHHHHHHHHHHHHhCCCcEEEEecCCHHHHHHHHHHHHHcCCChhHEEeeCCCCHHHHHHHHhcCC
Confidence            444 8999999 99999999999999888999999999 8877665554    2  2 6899999999999999999999


Q ss_pred             EEEeCCCCCCCCChHHHHHHHcCCcEEe-------cCCC-------CCccceeeeCcceEEECCCHHHHHHHHHHHHHcC
Q 039338          384 IFVNPTLRPQGLDLTLMEAMMSGKPVMA-------SRFP-------SIKGTIVVDDEFGFMFAPNVESLHKTLEAAVSEG  449 (493)
Q Consensus       384 v~v~ps~~~eg~~~~~~EAm~~G~PvI~-------s~~~-------~~~~e~v~~~~~G~~~~~d~~~l~~~i~~ll~~~  449 (493)
                      ++|+||.+  |+|++++|||+||+|||+       ++.+       |.+ |++.+         |+++++++|.++++| 
T Consensus       456 v~v~ps~~--~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~~g~~-e~v~~---------~~~~la~~i~~l~~~-  522 (568)
T 2vsy_A          456 LFLDTHPY--NAHTTASDALWTGCPVLTTPGETFAARVAGSLNHHLGLD-EMNVA---------DDAAFVAKAVALASD-  522 (568)
T ss_dssp             EEECCSSS--CCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHHHTCG-GGBCS---------SHHHHHHHHHHHHHC-
T ss_pred             EEeeCCCC--CCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHHCCCh-hhhcC---------CHHHHHHHHHHHhcC-
Confidence            99999954  999999999999999999       9999       888 76644         789999999999999 


Q ss_pred             cHHHHHHHHHHHHHH--HHhcCHHHHHHHHHHHHHHHhhc
Q 039338          450 PMRLAQRGEACRQYA--ASMFTANKMALAYERLFLCIKNE  487 (493)
Q Consensus       450 ~~~~~~~~~~~~~~~--~~~fs~~~~~~~~~~~~~~i~~~  487 (493)
                      ++.+++|++++++.+  .+.|+|+.++++++++|++++++
T Consensus       523 ~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~y~~~~~~  562 (568)
T 2vsy_A          523 PAALTALHARVDVLRRASGVFHMDGFADDFGALLQALARR  562 (568)
T ss_dssp             HHHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            999999999999998  66799999999999999998865

>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*

Probab=100.00  E-value=4e-34  Score=282.31  Aligned_cols=196  Identities=16%  Similarity=0.204  Sum_probs=162.2

Q ss_pred             HhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCCCCCCcEEEEEecccccccChH
Q 039338          248 RFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVAGRLVKDKGHP  327 (493)
Q Consensus       248 ~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Gr~~~~Kg~~  327 (493)
                      ..++++|.++++|+.+++.+.+ ++    ++.+||||+|.+.|.+....          +.+++.+++|+||+.+.||+ 
T Consensus       174 ~~~~~ad~vi~~S~~~~~~~~~-~~----~i~vipngvd~~~f~~~~~~----------~~~~~~~i~~vGrl~~~Kg~-  237 (406)
T 2hy7_A          174 RVAPTLDVIALVSPAMAAEVVS-RD----NVFHVGHGVDHNLDQLGDPS----------PYAEGIHAVAVGSMLFDPEF-  237 (406)
T ss_dssp             HHGGGCSEEEESCGGGGGGCSC-ST----TEEECCCCBCTTHHHHHCSC----------SCCSSEEEEEECCTTBCHHH-
T ss_pred             HHHHhCCEEEEcCHHHHHHHHh-cC----CEEEEcCCcChHhcCccccc----------ccCCCcEEEEEeccccccCH-
Confidence            5688999999999999988765 23    89999999999877543211          12333788899999999998 


Q ss_pred             HHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhh--hcCcEEEecCCCHHHHHHHHHHcCEEEeCCCCCCCCChHHHHHH--
Q 039338          328 LLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKD--FGHQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAM--  403 (493)
Q Consensus       328 ~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~--l~~~V~~~g~~~~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm--  403 (493)
                           +..+.+..++++|+|+|+|+    .++  +.++|.|+|+++++++.++|++||++|+||. .|++|++++|||  
T Consensus       238 -----~~~l~~~~~~~~l~ivG~g~----~~~~~l~~~V~f~G~~~~~~l~~~~~~adv~v~ps~-~E~~~~~~lEAm~K  307 (406)
T 2hy7_A          238 -----FVVASKAFPQVTFHVIGSGM----GRHPGYGDNVIVYGEMKHAQTIGYIKHARFGIAPYA-SEQVPVYLADSSMK  307 (406)
T ss_dssp             -----HHHHHHHCTTEEEEEESCSS----CCCTTCCTTEEEECCCCHHHHHHHHHTCSEEECCBS-CSCCCTTHHHHCHH
T ss_pred             -----HHHHHHhCCCeEEEEEeCch----HHhcCCCCCEEEcCCCCHHHHHHHHHhcCEEEECCC-cccCchHHHHHHHH
Confidence                 44455566899999999987    333  3489999999999999999999999999996 599999999999  


Q ss_pred             -----HcCCcEEecCCCCCccceeeeCcceEE-ECC-CHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHhcCHHHHHHH
Q 039338          404 -----MSGKPVMASRFPSIKGTIVVDDEFGFM-FAP-NVESLHKTLEAAVSEGPMRLAQRGEACRQYAASMFTANKMALA  476 (493)
Q Consensus       404 -----~~G~PvI~s~~~~~~~e~v~~~~~G~~-~~~-d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~  476 (493)
                           +||+|||+|+.       +.++.+|++ +++ |+++|+++|.+++++ ++         + ...+.|+|+.++++
T Consensus       308 l~eYla~G~PVIas~~-------v~~~~~G~l~v~~~d~~~la~ai~~ll~~-~~---------~-~~~~~~sw~~~a~~  369 (406)
T 2hy7_A          308 LLQYDFFGLPAVCPNA-------VVGPYKSRFGYTPGNADSVIAAITQALEA-PR---------V-RYRQCLNWSDTTDR  369 (406)
T ss_dssp             HHHHHHHTCCEEEEGG-------GTCSCSSEEEECTTCHHHHHHHHHHHHHC-CC---------C-CCSCCCBHHHHHHH
T ss_pred             HHHHhhCCCcEEEehh-------cccCcceEEEeCCCCHHHHHHHHHHHHhC-cc---------h-hhhhcCCHHHHHHH
Confidence                 99999999986       456788999 999 999999999999998 54         1 22356999999999


Q ss_pred             HHHH--HHHHhhc
Q 039338          477 YERL--FLCIKNE  487 (493)
Q Consensus       477 ~~~~--~~~i~~~  487 (493)
                      ++++  |.++.-.
T Consensus       370 ~~~~~~y~~~~~~  382 (406)
T 2hy7_A          370 VLDPRAYPETRLY  382 (406)
T ss_dssp             HHCGGGSGGGBSS
T ss_pred             HHHhhcccccCcC
Confidence            9999  8876543

>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*

Probab=100.00  E-value=5.4e-33  Score=271.22  Aligned_cols=324  Identities=16%  Similarity=0.123  Sum_probs=232.0

Q ss_pred             ceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCC--C-
Q 039338           83 TLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEA--D-  159 (493)
Q Consensus        83 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-  159 (493)
                      +|||++++.      ..||....+..|+++|+++||+|++++.....  ..  ...      ...+..+.......  . 
T Consensus         6 ~mkIl~~~~------~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~--~~--~~~------~~~g~~~~~~~~~~~~~~   69 (364)
T 1f0k_A            6 GKRLMVMAG------GTGGHVFPGLAVAHHLMAQGWQVRWLGTADRM--EA--DLV------PKHGIEIDFIRISGLRGK   69 (364)
T ss_dssp             -CEEEEECC------SSHHHHHHHHHHHHHHHTTTCEEEEEECTTST--HH--HHG------GGGTCEEEECCCCCCTTC
T ss_pred             CcEEEEEeC------CCccchhHHHHHHHHHHHcCCEEEEEecCCcc--hh--hhc------cccCCceEEecCCccCcC
Confidence            389999984      44799999999999999999999999976532  10  000      00011111111100  0 


Q ss_pred             --------ccccccchHHHHHHhcCCCCcEEEeCccc--hhHH---hhhccCcEEEEeccchhhhhhhhhhhhhhcCCCC
Q 039338          160 --------KWRYSKGWEQFDEENQREPFDVVHSESVA--LPHW---LARNVTNLAVSWHGIALESLQSGIFQDLTRKPLE  226 (493)
Q Consensus       160 --------~~~~~~~~~~~~~~~~~~~~DiI~~~~~~--~~~~---~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~  226 (493)
                              ..........+.+.+++.+||+||+++..  +...   ...++| ++++.|+....                
T Consensus        70 ~~~~~~~~~~~~~~~~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~~~~~~p-~v~~~~~~~~~----------------  132 (364)
T 1f0k_A           70 GIKALIAAPLRIFNAWRQARAIMKAYKPDVVLGMGGYVSGPGGLAAWSLGIP-VVLHEQNGIAG----------------  132 (364)
T ss_dssp             CHHHHHTCHHHHHHHHHHHHHHHHHHCCSEEEECSSTTHHHHHHHHHHTTCC-EEEEECSSSCC----------------
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCcCchHHHHHHHHcCCC-EEEEecCCCCc----------------
Confidence                    01111233455666667799999999752  2222   223567 88888874210                


Q ss_pred             ccchHhHhHHHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCC
Q 039338          227 PMSLAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGI  306 (493)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i  306 (493)
                              .    .     ...+.+.+|.+++.++..       +  +  ++.+++||+|.+.+.+..     .++++++
T Consensus       133 --------~----~-----~~~~~~~~d~v~~~~~~~-------~--~--~~~~i~n~v~~~~~~~~~-----~~~~~~~  179 (364)
T 1f0k_A          133 --------L----T-----NKWLAKIATKVMQAFPGA-------F--P--NAEVVGNPVRTDVLALPL-----PQQRLAG  179 (364)
T ss_dssp             --------H----H-----HHHHTTTCSEEEESSTTS-------S--S--SCEECCCCCCHHHHTSCC-----HHHHHTT
T ss_pred             --------H----H-----HHHHHHhCCEEEecChhh-------c--C--CceEeCCccchhhcccch-----hhhhccc
Confidence                    0    0     113456789999988764       2  2  678999999987654421     2456777


Q ss_pred             CCCCcEEEEEecccccccChHHHHHHHHHHHhhCCCeE-EEEEeCCCcHHHHh----hhc-CcEEEecCCCHHHHHHHHH
Q 039338          307 PKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVY-LIVAGSGPWEQRYK----DFG-HQVLVMGSMSPAELRAFYN  380 (493)
Q Consensus       307 ~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~-l~i~G~g~~~~~~~----~l~-~~V~~~g~~~~~~~~~~~~  380 (493)
                      +.+++.++++.|++.+.|+.+.+++|+..+.+   +++ ++++|+|+. +.++    +++ ++|.|.|++  +++.++|+
T Consensus       180 ~~~~~~il~~~g~~~~~k~~~~li~a~~~l~~---~~~~l~i~G~~~~-~~l~~~~~~~~~~~v~~~g~~--~~~~~~~~  253 (364)
T 1f0k_A          180 REGPVRVLVVGGSQGARILNQTMPQVAAKLGD---SVTIWHQSGKGSQ-QSVEQAYAEAGQPQHKVTEFI--DDMAAAYA  253 (364)
T ss_dssp             CCSSEEEEEECTTTCCHHHHHHHHHHHHHHGG---GEEEEEECCTTCH-HHHHHHHHHTTCTTSEEESCC--SCHHHHHH
T ss_pred             CCCCcEEEEEcCchHhHHHHHHHHHHHHHhcC---CcEEEEEcCCchH-HHHHHHHhhcCCCceEEecch--hhHHHHHH
Confidence            77765677778899999999999999999965   678 577898874 3333    333 689999999  79999999


Q ss_pred             HcCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCcc------ceeeeCcceEEECC-C--HHHHHHHHHHHHHcCcH
Q 039338          381 AIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKG------TIVVDDEFGFMFAP-N--VESLHKTLEAAVSEGPM  451 (493)
Q Consensus       381 ~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~------e~v~~~~~G~~~~~-d--~~~l~~~i~~ll~~~~~  451 (493)
                      .||++|+||    | |++++|||++|+|||+++.+|.++      +.+.+.+.|+++++ |  +++++++|.++  | ++
T Consensus       254 ~ad~~v~~s----g-~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~~~~g~g~~~~~~d~~~~~la~~i~~l--~-~~  325 (364)
T 1f0k_A          254 WADVVVCRS----G-ALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKAGAAKIIEQPQLSVDAVANTLAGW--S-RE  325 (364)
T ss_dssp             HCSEEEECC----C-HHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHTTSEEECCGGGCCHHHHHHHHHTC--C-HH
T ss_pred             hCCEEEECC----c-hHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHHHhCCcEEEeccccCCHHHHHHHHHhc--C-HH
Confidence            999999998    2 899999999999999999988642      13444556999998 7  99999999999  6 89


Q ss_pred             HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhc
Q 039338          452 RLAQRGEACRQYAASMFTANKMALAYERLFLCIKNE  487 (493)
Q Consensus       452 ~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~i~~~  487 (493)
                      .++++++++++.++ .|+|++++++++++|++.-..
T Consensus       326 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~y~~~~~~  360 (364)
T 1f0k_A          326 TLLTMAERARAASI-PDATERVANEVSRVARALEHH  360 (364)
T ss_dssp             HHHHHHHHHHHTCC-TTHHHHHHHHHHHHHTTC---
T ss_pred             HHHHHHHHHHHhhc-cCHHHHHHHHHHHHHHHHHhh
Confidence            99999999999876 599999999999999876543

>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*

Probab=100.00  E-value=2.5e-33  Score=275.60  Aligned_cols=358  Identities=11%  Similarity=0.066  Sum_probs=242.7

Q ss_pred             eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCC-EEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCCCccc
Q 039338           84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGH-RVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEADKWR  162 (493)
Q Consensus        84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~-~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (493)
                      |||++++...      .+ ...+..++++|.++|+ ++.++......  .......... ..... ..+...........
T Consensus         1 mkIl~v~~~~------~~-~~~~~~l~~~L~~~g~~~~~v~~~~~~~--~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~   69 (384)
T 1vgv_A            1 MKVLTVFGTR------PE-AIKMAPLVHALAKDPFFEAKVCVTAQHR--EMLDQVLKLF-SIVPD-YDLNIMQPGQGLTE   69 (384)
T ss_dssp             CEEEEEECSH------HH-HHHHHHHHHHHHHSTTCEEEEEECCSSG--GGGHHHHHHH-TCCCS-EECCCCSTTSCHHH
T ss_pred             CeEEEEeccc------HH-HHHHHHHHHHHHhCCCCceEEEEcCCCH--HHHHHHHHHc-CCCCC-cceecCCCCccHHH
Confidence            8999998632      22 2346789999999994 88877654332  1000010000 00000 00001000001111


Q ss_pred             -cccchHHHHHHhcCCCCcEEEeCcc---chhHH---hhhccCcEEEEeccchhhhhhhhhhhhhhcCCCCccchHhHhH
Q 039338          163 -YSKGWEQFDEENQREPFDVVHSESV---ALPHW---LARNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKS  235 (493)
Q Consensus       163 -~~~~~~~~~~~~~~~~~DiI~~~~~---~~~~~---~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (493)
                       .......+.+.+++.+||+||+++.   .++..   ...++| ++.+.|+.....    .+        .        .
T Consensus        70 ~~~~~~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~a~~~~ip-~v~~~~~~~~~~----~~--------~--------~  128 (384)
T 1vgv_A           70 ITCRILEGLKPILAEFKPDVVLVHGDTTTTLATSLAAFYQRIP-VGHVEAGLRTGD----LY--------S--------P  128 (384)
T ss_dssp             HHHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHTTTCC-EEEESCCCCCSC----TT--------S--------S
T ss_pred             HHHHHHHHHHHHHHHhCCCEEEEeCCchHHHHHHHHHHHHCCC-EEEEeccccccc----cc--------C--------C
Confidence             1223455666777889999999864   12211   223567 888888753100    00        0        0


Q ss_pred             HHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCc-cCCCccCCc-c----cchhhhhhhC-CCC
Q 039338          236 LQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGI-NENEYGVDL-S----LGQSFRSRIG-IPK  308 (493)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngv-d~~~~~~~~-~----~~~~~r~~~~-i~~  308 (493)
                      +.....+.    ...+.+|.++++|+..++.+.+ +|++.+++.+++||+ |...+.+.. .    ....+++++| ++.
T Consensus       129 ~~~~~~~~----~~~~~~d~ii~~s~~~~~~l~~-~g~~~~~i~vi~n~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (384)
T 1vgv_A          129 WPEEANRT----LTGHLAMYHFSPTETSRQNLLR-ENVADSRIFITGNTVIDALLWVRDQVMSSDKLRSELAANYPFIDP  203 (384)
T ss_dssp             TTHHHHHH----HHHTTCSEEEESSHHHHHHHHH-TTCCGGGEEECCCHHHHHHHHHHHHTTTCHHHHHHHHTTCTTCCT
T ss_pred             CchHhhHH----HHHhhccEEEcCcHHHHHHHHH-cCCChhhEEEeCChHHHHHHhhhhccccchhhhHHHHHhccccCC
Confidence            00111111    1235699999999999999976 688888999999995 432221110 0    0124677777 766


Q ss_pred             CCcEEEEEecccccc-cChHHHHHHHHHHHhhCCCeEEEEE-eCCC-cHHHHhhh-c--CcEEEecCCCHHHHHHHHHHc
Q 039338          309 NASLVLGVAGRLVKD-KGHPLLHEAFSKLMVKYPDVYLIVA-GSGP-WEQRYKDF-G--HQVLVMGSMSPAELRAFYNAI  382 (493)
Q Consensus       309 ~~~~~i~~~Gr~~~~-Kg~~~ll~a~~~l~~~~~~~~l~i~-G~g~-~~~~~~~l-~--~~V~~~g~~~~~~~~~~~~~a  382 (493)
                      +++++++++||+.+. ||++.+++|+..+.++.+++++++. |.++ ..+.++++ .  ++|.|+|+++.+++.++|+.|
T Consensus       204 ~~~~vl~~~gr~~~~~kg~~~li~a~~~l~~~~~~~~l~i~~g~~~~~~~~l~~~~~~~~~v~~~g~~~~~~~~~~~~~a  283 (384)
T 1vgv_A          204 DKKMILVTGHRRESFGRGFEEICHALADIATTHQDIQIVYPVHLNPNVREPVNRILGHVKNVILIDPQEYLPFVWLMNHA  283 (384)
T ss_dssp             TSEEEEEECCCBSSCCHHHHHHHHHHHHHHHHCTTEEEEEECCBCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHHC
T ss_pred             CCCEEEEEeCCccccchHHHHHHHHHHHHHhhCCCeEEEEEcCCCHHHHHHHHHHhhcCCCEEEeCCCCHHHHHHHHHhC
Confidence            666788899999876 9999999999999888889999885 5443 34455443 2  689999999889999999999


Q ss_pred             CEEEeCCCCCCCCChHHHHHHHcCCcEEecCC-CCCccceeeeCcceEEECCCHHHHHHHHHHHHHcCcHHHHHHHHHHH
Q 039338          383 DIFVNPTLRPQGLDLTLMEAMMSGKPVMASRF-PSIKGTIVVDDEFGFMFAPNVESLHKTLEAAVSEGPMRLAQRGEACR  461 (493)
Q Consensus       383 dv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~-~~~~~e~v~~~~~G~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~  461 (493)
                      |++|.||      |.+++|||++|+|||+++. ++.. |++.++ +|+++++|+++++++|.++++| ++.+++|+++++
T Consensus       284 d~~v~~S------g~~~lEA~a~G~PvI~~~~~~~~~-e~v~~g-~g~lv~~d~~~la~~i~~ll~d-~~~~~~~~~~~~  354 (384)
T 1vgv_A          284 WLILTDS------GGIQEEAPSLGKPVLVMRDTTERP-EAVTAG-TVRLVGTDKQRIVEEVTRLLKD-ENEYQAMSRAHN  354 (384)
T ss_dssp             SEEEESS------STGGGTGGGGTCCEEEESSCCSCH-HHHHHT-SEEEECSSHHHHHHHHHHHHHC-HHHHHHHHSSCC
T ss_pred             cEEEECC------cchHHHHHHcCCCEEEccCCCCcc-hhhhCC-ceEEeCCCHHHHHHHHHHHHhC-hHHHhhhhhccC
Confidence            9999998      2358999999999999986 7777 787777 9999977999999999999998 899999999998


Q ss_pred             HHHHHhcCHHHHHHHHHHHHHHHhhcc
Q 039338          462 QYAASMFTANKMALAYERLFLCIKNET  488 (493)
Q Consensus       462 ~~~~~~fs~~~~~~~~~~~~~~i~~~~  488 (493)
                      ++. +.|+|+++++.+.++|+++.+.+
T Consensus       355 ~~~-~~~~~~~i~~~~~~~~~~~~~~~  380 (384)
T 1vgv_A          355 PYG-DGQACSRILEALKNNRISLGSHH  380 (384)
T ss_dssp             TTC-CSCHHHHHHHHHHHTCCCC----
T ss_pred             CCc-CCCHHHHHHHHHHHHHHhhcccc
Confidence            876 45999999999999998877654

>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A

Probab=100.00  E-value=6e-33  Score=271.96  Aligned_cols=348  Identities=12%  Similarity=0.065  Sum_probs=235.9

Q ss_pred             CCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhC-C-CEEEEEecCCCCCCCCCCccccCCCCCCCCCCc-eEeecCC
Q 039338           81 KFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARR-G-HRVHIFTSPVDNINSPSISHQENDDGSNNKYPL-LHFHEGE  157 (493)
Q Consensus        81 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~-G-~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  157 (493)
                      +++|||++++..+|   ..|    .+..++++|+++ | |+|.+++.....  .........     .+... +......
T Consensus         6 ~~~mkIl~v~~~~~---~~~----~~~~l~~~L~~~~~~~~v~~~~~~~~~--~~~~~~~~~-----~~~~~~~~~~~~~   71 (375)
T 3beo_A            6 TERLKVMTIFGTRP---EAI----KMAPLVLELQKHPEKIESIVTVTAQHR--QMLDQVLSI-----FGITPDFDLNIMK   71 (375)
T ss_dssp             SSCEEEEEEECSHH---HHH----HHHHHHHHHTTCTTTEEEEEEECCSSS--HHHHHHHHH-----HTCCCSEECCCCC
T ss_pred             CcCceEEEEecCcH---HHH----HHHHHHHHHHhCCCCCCeEEEEcCCCH--HHHHHHHHH-----cCCCCccccccCC
Confidence            44699999986432   112    356788888876 4 888877754432  100000000     00000 1111110


Q ss_pred             CC-c--cccccchHHHHHHhcCCCCcEEEeCccc---hhH-H--hhhccCcEEEEeccchhhhhhhhhhhhhhcCCCCcc
Q 039338          158 AD-K--WRYSKGWEQFDEENQREPFDVVHSESVA---LPH-W--LARNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPM  228 (493)
Q Consensus       158 ~~-~--~~~~~~~~~~~~~~~~~~~DiI~~~~~~---~~~-~--~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~  228 (493)
                      +. .  .........+.+.+++.+||+||+|+..   +.. .  ...++| ++.+.|+....    ..+.          
T Consensus        72 ~~~~~~~~~~~~~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~~~~~~ip-~v~~~~~~~~~----~~~~----------  136 (375)
T 3beo_A           72 DRQTLIDITTRGLEGLDKVMKEAKPDIVLVHGDTTTTFIASLAAFYNQIP-VGHVEAGLRTW----DKYS----------  136 (375)
T ss_dssp             TTCCHHHHHHHHHHHHHHHHHHHCCSEEEEETTSHHHHHHHHHHHHTTCC-EEEESCCCCCS----CTTS----------
T ss_pred             CcccHHHHHHHHHHHHHHHHHHhCCCEEEEeCCchHHHHHHHHHHHHCCC-EEEEecccccc----cccC----------
Confidence            10 0  1112234456666777899999998642   221 1  223567 77777764110    0000          


Q ss_pred             chHhHhHHHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCC-ccCCCccCCcccchhhhhhhCCC
Q 039338          229 SLAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNG-INENEYGVDLSLGQSFRSRIGIP  307 (493)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ng-vd~~~~~~~~~~~~~~r~~~~i~  307 (493)
                            .+...+.+    ....+.+|.++++|+..++.+.+ +|++.+++.+++|| +|...+.+.......+++++  +
T Consensus       137 ------~~~~~~~~----~~~~~~~d~ii~~s~~~~~~~~~-~g~~~~~i~vi~n~~~d~~~~~~~~~~~~~~~~~~--~  203 (375)
T 3beo_A          137 ------PYPEEMNR----QLTGVMADLHFSPTAKSATNLQK-ENKDESRIFITGNTAIDALKTTVKETYSHPVLEKL--G  203 (375)
T ss_dssp             ------STTHHHHH----HHHHHHCSEEEESSHHHHHHHHH-TTCCGGGEEECCCHHHHHHHHHCCSSCCCHHHHTT--T
T ss_pred             ------CChhHhhh----hHHhhhhheeeCCCHHHHHHHHH-cCCCcccEEEECChhHhhhhhhhhhhhhHHHHHhc--c
Confidence                  00001111    11234589999999999999987 68888899999999 78765544322223455544  2


Q ss_pred             CCCcEEEEEecccccc-cChHHHHHHHHHHHhhCCCeEEEEEeCCCc---HHHHhhh-c--CcEEEecCCCHHHHHHHHH
Q 039338          308 KNASLVLGVAGRLVKD-KGHPLLHEAFSKLMVKYPDVYLIVAGSGPW---EQRYKDF-G--HQVLVMGSMSPAELRAFYN  380 (493)
Q Consensus       308 ~~~~~~i~~~Gr~~~~-Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~---~~~~~~l-~--~~V~~~g~~~~~~~~~~~~  380 (493)
                       +++++++++||+.+. ||++.+++|+..+.++.|++++++ |.|+.   .+.++++ .  ++|.|+|+++..++.++|+
T Consensus       204 -~~~~vl~~~gr~~~~~K~~~~li~a~~~l~~~~~~~~~i~-~~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~  281 (375)
T 3beo_A          204 -NNRLVLMTAHRRENLGEPMRNMFRAIKRLVDKHEDVQVVY-PVHMNPVVRETANDILGDYGRIHLIEPLDVIDFHNVAA  281 (375)
T ss_dssp             -TSEEEEEECCCGGGTTHHHHHHHHHHHHHHHHCTTEEEEE-ECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHH
T ss_pred             -CCCeEEEEecccccchhHHHHHHHHHHHHHhhCCCeEEEE-eCCCCHHHHHHHHHHhhccCCEEEeCCCCHHHHHHHHH
Confidence             344778899999875 999999999999988888999655 66654   2344443 3  7999999999999999999


Q ss_pred             HcCEEEeCCCCCCCCChHHHHHHHcCCcEEecCC-CCCccceeeeCcceEEECCCHHHHHHHHHHHHHcCcHHHHHHHHH
Q 039338          381 AIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRF-PSIKGTIVVDDEFGFMFAPNVESLHKTLEAAVSEGPMRLAQRGEA  459 (493)
Q Consensus       381 ~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~-~~~~~e~v~~~~~G~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~  459 (493)
                      .||++|+||      |.+++|||++|+|||+++. ++.+ |++.++ +|+++++|+++++++|.++++| ++.+++|+++
T Consensus       282 ~ad~~v~~s------g~~~lEA~a~G~Pvi~~~~~~~~~-e~v~~g-~g~~v~~d~~~la~~i~~ll~~-~~~~~~~~~~  352 (375)
T 3beo_A          282 RSYLMLTDS------GGVQEEAPSLGVPVLVLRDTTERP-EGIEAG-TLKLAGTDEETIFSLADELLSD-KEAHDKMSKA  352 (375)
T ss_dssp             TCSEEEECC------HHHHHHHHHHTCCEEECSSCCSCH-HHHHTT-SEEECCSCHHHHHHHHHHHHHC-HHHHHHHCCC
T ss_pred             hCcEEEECC------CChHHHHHhcCCCEEEecCCCCCc-eeecCC-ceEEcCCCHHHHHHHHHHHHhC-hHhHhhhhhc
Confidence            999999988      5679999999999999964 8877 777766 9999977999999999999998 8999999999


Q ss_pred             HHHHHHHhcCHHHHHHHHHHHHH
Q 039338          460 CRQYAASMFTANKMALAYERLFL  482 (493)
Q Consensus       460 ~~~~~~~~fs~~~~~~~~~~~~~  482 (493)
                      ++++. +.|+|+++++.++++++
T Consensus       353 ~~~~~-~~~~~~~i~~~~~~~~~  374 (375)
T 3beo_A          353 SNPYG-DGRASERIVEAILKHFN  374 (375)
T ss_dssp             CCTTC-CSCHHHHHHHHHHHHTT
T ss_pred             CCCCC-CCcHHHHHHHHHHHHhh
Confidence            98876 45999999999988764

>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*

Probab=99.96  E-value=9.9e-29  Score=246.43  Aligned_cols=200  Identities=16%  Similarity=0.181  Sum_probs=165.1

Q ss_pred             CCcEEEecCCccCCCccCCcc---c--chhhhhhhCCCCCCcEEEEEecccccccChHHHHHHHHHHHhhCCC----eEE
Q 039338          275 SERVHVILNGINENEYGVDLS---L--GQSFRSRIGIPKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPD----VYL  345 (493)
Q Consensus       275 ~~~v~vi~ngvd~~~~~~~~~---~--~~~~r~~~~i~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~----~~l  345 (493)
                      ..++.++|||||.+.|.+...   .  ...+|++++   ++ .+|+++||+++.||++.+++|++++.+++|+    ++|
T Consensus       218 ~~~v~vip~GID~~~f~~~~~~~~~~~~~~lr~~~~---~~-~vil~VgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~L  293 (482)
T 1uqt_A          218 AFRTEVYPIGIEPKEIAKQAAGPLPPKLAQLKAELK---NV-QNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRY  293 (482)
T ss_dssp             EEEEEECCCCCCHHHHHHHHHSCCCHHHHHHHHHTT---TC-EEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEE
T ss_pred             EEEEEEEeccCCHHHHHHHhcCcchHHHHHHHHHhC---CC-EEEEEEeCCcccCCHHHHHHHHHHHHHhCccccCcEEE
Confidence            357899999999887754211   1  346777776   33 6788999999999999999999999888764    789


Q ss_pred             EEEeCC-----Cc----HHHHhhhc------------CcEE-EecCCCHHHHHHHHHHcCEEEeCCCCCCCCChHHHHHH
Q 039338          346 IVAGSG-----PW----EQRYKDFG------------HQVL-VMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAM  403 (493)
Q Consensus       346 ~i~G~g-----~~----~~~~~~l~------------~~V~-~~g~~~~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm  403 (493)
                      +++|.+     +.    ++.++++.            ..|. +.|.++++++..+|+.||++|+||.+ ||||++++|||
T Consensus       294 v~vG~p~~~~~~~~~~l~~~l~~l~~~in~~~g~~~~~~v~~~~g~v~~~el~~ly~~ADv~v~pS~~-EGfgLv~lEAm  372 (482)
T 1uqt_A          294 TQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLR-DGMNLVAKEYV  372 (482)
T ss_dssp             EEECCBCSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCSS-BSCCHHHHHHH
T ss_pred             EEEECCCccchHHHHHHHHHHHHHHHHHhhhcccCCCceEEEeCCCCCHHHHHHHHHHccEEEECCCc-ccCCchHHHHH
Confidence            999852     21    22233321            1366 46899999999999999999999976 99999999999


Q ss_pred             HcCC-----cEEecCCCCCccceeeeCcceEEECC-CHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHhcCHHHHHHHH
Q 039338          404 MSGK-----PVMASRFPSIKGTIVVDDEFGFMFAP-NVESLHKTLEAAVSEGPMRLAQRGEACRQYAASMFTANKMALAY  477 (493)
Q Consensus       404 ~~G~-----PvI~s~~~~~~~e~v~~~~~G~~~~~-d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~  477 (493)
                      +||+     |||+|+.+|.. +.+   .+|+++++ |+++++++|.+++++++++++++++++++.+.+ |||+..++++
T Consensus       373 A~g~~~~~gpvV~S~~~G~~-~~l---~~g~lv~p~d~~~lA~ai~~lL~~~~~~r~~~~~~~~~~v~~-~s~~~~a~~~  447 (482)
T 1uqt_A          373 AAQDPANPGVLVLSQFAGAA-NEL---TSALIVNPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVK-NDINHWQECF  447 (482)
T ss_dssp             HHSCTTSCCEEEEETTBGGG-GTC---TTSEEECTTCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHH-TCHHHHHHHH
T ss_pred             HhCCCCCCCCEEEECCCCCH-HHh---CCeEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh-CCHHHHHHHH
Confidence            9997     89999988877 444   27999999 999999999999997577889999999999987 8999999999


Q ss_pred             HHHHHHH
Q 039338          478 ERLFLCI  484 (493)
Q Consensus       478 ~~~~~~i  484 (493)
                      .+.|+++
T Consensus       448 l~~l~~~  454 (482)
T 1uqt_A          448 ISDLKQI  454 (482)
T ss_dssp             HHHHHHS
T ss_pred             HHHHHhc
Confidence            9999887

>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8

Probab=99.96  E-value=1e-28  Score=219.61  Aligned_cols=182  Identities=23%  Similarity=0.366  Sum_probs=159.5

Q ss_pred             ecCCccCCCcc--CCcc----cchhhhhhhCCCCCCcEEEEEecccc-cccChHHHHHHHHHHH--hhCCCeEEEEEeCC
Q 039338          281 ILNGINENEYG--VDLS----LGQSFRSRIGIPKNASLVLGVAGRLV-KDKGHPLLHEAFSKLM--VKYPDVYLIVAGSG  351 (493)
Q Consensus       281 i~ngvd~~~~~--~~~~----~~~~~r~~~~i~~~~~~~i~~~Gr~~-~~Kg~~~ll~a~~~l~--~~~~~~~l~i~G~g  351 (493)
                      ||||+|.+.|.  +...    ....++++++++++  .+|+|+|++. +.||++.+++++..+.  +++++++|+++|.+
T Consensus         2 ipngvd~~~f~~~~~~~~~~~~~~~~r~~~~~~~~--~~i~~~G~~~~~~K~~~~li~a~~~l~~~~~~~~~~l~i~G~~   79 (200)
T 2bfw_A            2 SHNGIDCSFWNESYLTGSRDERKKSLLSKFGMDEG--VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKG   79 (200)
T ss_dssp             ---CCCTTTSSGGGSCSCHHHHHHHHHHHTTCCSC--EEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGGEEEEEECCB
T ss_pred             CCCccChhhccccccccchhhHHHHHHHHcCCCCC--CEEEEeeccccccCCHHHHHHHHHHHHhhccCCCeEEEEECCC
Confidence            79999999987  6531    15678999998754  4788999999 9999999999999997  77789999999998


Q ss_pred             C--cHHHHhhhc---CcEEE-ecCCCHHHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCccceeeeC
Q 039338          352 P--WEQRYKDFG---HQVLV-MGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDD  425 (493)
Q Consensus       352 ~--~~~~~~~l~---~~V~~-~g~~~~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~  425 (493)
                      +  ..+.++++.   .+|.| +|+++++++.++|+.||++|+||.. |++|++++|||++|+|||+++.++.. +++ ++
T Consensus        80 ~~~~~~~l~~~~~~~~~v~~~~g~~~~~~~~~~~~~ad~~l~ps~~-e~~~~~~~Ea~a~G~PvI~~~~~~~~-e~~-~~  156 (200)
T 2bfw_A           80 DPELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDFVIIPSYF-EPFGLVALEAMCLGAIPIASAVGGLR-DII-TN  156 (200)
T ss_dssp             CHHHHHHHHHHHHHCTTEEEECSCCCHHHHHHHHTTCSEEEECCSC-CSSCHHHHHHHHTTCEEEEESCHHHH-HHC-CT
T ss_pred             ChHHHHHHHHHHHhcCCEEEEeccCCHHHHHHHHHHCCEEEECCCC-CCccHHHHHHHHCCCCEEEeCCCChH-HHc-CC
Confidence            7  555555433   38999 9999999999999999999999965 99999999999999999999999988 888 89


Q ss_pred             cceEEECC-CHHHHHHHHHHHHH-cCcHHHHHHHHHHHHHHHHhcC
Q 039338          426 EFGFMFAP-NVESLHKTLEAAVS-EGPMRLAQRGEACRQYAASMFT  469 (493)
Q Consensus       426 ~~G~~~~~-d~~~l~~~i~~ll~-~~~~~~~~~~~~~~~~~~~~fs  469 (493)
                      .+|+++++ |+++++++|.++++ + ++.+++|++++++++++ ||
T Consensus       157 ~~g~~~~~~~~~~l~~~i~~l~~~~-~~~~~~~~~~a~~~~~~-fs  200 (200)
T 2bfw_A          157 ETGILVKAGDPGELANAILKALELS-RSDLSKFRENCKKRAMS-FS  200 (200)
T ss_dssp             TTCEEECTTCHHHHHHHHHHHHHCC-HHHHHHHHHHHHHHHHH-TC
T ss_pred             CceEEecCCCHHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHh-cC
Confidence            99999998 99999999999999 8 99999999999999988 76

>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*

Probab=99.96  E-value=2.7e-28  Score=243.59  Aligned_cols=303  Identities=13%  Similarity=0.143  Sum_probs=201.9

Q ss_pred             CCCCcEEEeCccc---hhHHhhh---ccCcEEEEeccchhhhh-h--h--hhhhhhhcCCCCccchHhHhHHHHHHHHHH
Q 039338          176 REPFDVVHSESVA---LPHWLAR---NVTNLAVSWHGIALESL-Q--S--GIFQDLTRKPLEPMSLAFNKSLQGVMLKVL  244 (493)
Q Consensus       176 ~~~~DiI~~~~~~---~~~~~~~---~~p~~v~~~h~~~~~~~-~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (493)
                      ..+|||+|+|.+.   .+.++..   .++ .|.|+|...+... .  .  +++..+... +.    .....-.......-
T Consensus       179 ~~~pdIiH~HDW~tg~~~~~Lk~~~~~i~-tVfTiH~telGR~lagqg~~~~y~~L~~~-~~----d~ea~~~~i~~~~~  252 (725)
T 3nb0_A          179 SQHAIVAHFHEWLAGVALPLCRKRRIDVV-TIFTTHATLLGRYLCASGSFDFYNCLESV-DV----DHEAGRFGIYHRYC  252 (725)
T ss_dssp             CSEEEEEEEESGGGCTHHHHHHHTTCSCE-EEEEESSCHHHHHHTSSSCSCHHHHGGGC-CH----HHHHHHTTCHHHHH
T ss_pred             CCCCcEEEeCchhhhHHHHHHHHhCCCCC-EEEEEecchhhhhhhhcCCCchhhhhhhc-CC----ChhhhhhchhHHHH
Confidence            4679999999752   2233322   345 9999998643221 0  0  111111100 00    00000000111222


Q ss_pred             HHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcc-------cchhhhh--------hhCCCCC
Q 039338          245 NEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLS-------LGQSFRS--------RIGIPKN  309 (493)
Q Consensus       245 ~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~-------~~~~~r~--------~~~i~~~  309 (493)
                      .++.....||.|+++|+.+++.+...++.+.+.+  |+||+|.+.|.+...       .+..+.+        .++++.+
T Consensus       253 ~EKaga~~AD~ITTVS~~yA~Ei~~Ll~r~~d~i--IpNGID~~~f~p~~~~~~~k~~aK~klq~~l~~~~~~~l~l~~d  330 (725)
T 3nb0_A          253 IERAAAHSADVFTTVSQITAFEAEHLLKRKPDGI--LPNGLNVIKFQAFHEFQNLHALKKEKINDFVRGHFHGCFDFDLD  330 (725)
T ss_dssp             HHHHHHHHSSEEEESSHHHHHHHHHHTSSCCSEE--CCCCBCCCCCSSTTHHHHHHHHHHHHHHHHHHHHTTTCCCSCGG
T ss_pred             HHHHHHHhCCEEEECCHHHHHHHHHHhcCCCCEE--EcCCccccccCcchhhHHHHHHHHHHHHHHHHhhcccCCCCCCC
Confidence            3456678999999999999999998777665544  999999999987521       1122222        2256555


Q ss_pred             CcEEEEEecccc-cccChHHHHHHHHHHHhh----C---CCeEEEEEeCCCcH---------------------------
Q 039338          310 ASLVLGVAGRLV-KDKGHPLLHEAFSKLMVK----Y---PDVYLIVAGSGPWE---------------------------  354 (493)
Q Consensus       310 ~~~~i~~~Gr~~-~~Kg~~~ll~a~~~l~~~----~---~~~~l~i~G~g~~~---------------------------  354 (493)
                      +.++|+.+||+. .+||++.+++|+.+|...    +   .-+.|+++..+...                           
T Consensus       331 k~liifivgRle~~nKGiDl~ieAl~~L~~~l~~~~~~~~vvafii~p~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~  410 (725)
T 3nb0_A          331 NTLYFFIAGRYEYKNKGADMFIEALARLNYRLKVSGSKKTVVAFIVMPAKNNSFTVEALKGQAEVRALENTVHEVTTSIG  410 (725)
T ss_dssp             GEEEEEEESSCCTTTTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ceeEEEEEEEeccccCCHHHHHHHHHHHHHHHhhccCCCcEEEEEEeCCCCCCCchhhhcchhHHHHHHHHHHHHHHHHh
Confidence            657777789999 789999999999998753    1   23566666533100                           


Q ss_pred             ------------------------------H------------------------------------HHhhhc------C
Q 039338          355 ------------------------------Q------------------------------------RYKDFG------H  362 (493)
Q Consensus       355 ------------------------------~------------------------------------~~~~l~------~  362 (493)
                                                    +                                    .+++++      +
T Consensus       411 ~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~lkr~~~~~~~~~~~lpp~~TH~~~~~~~D~Il~~~r~l~L~N~~~d  490 (725)
T 3nb0_A          411 KRIFDHAIRYPHNGLTTELPTDLGELLKSSDKVMLKRRILALRRPEGQLPPIVTHNMVDDANDLILNKIRQVQLFNSPSD  490 (725)
T ss_dssp             HHHHHHHHHTTSTTCCSSSCCCHHHHCCHHHHHHHHHHHHHHCCCTTCCCCSBSEEETTGGGCHHHHHHHHHTCCCCTTC
T ss_pred             HHHHHHHhcccccccCCCCCCCHHHhcChHHHHHHHHHHHhhccCCCCCCCeeeeecccCCccHHHHHHHhcCCCCCcCC
Confidence                                          0                                    001111      2


Q ss_pred             c--EEEe-cCCCHH------HHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCccceeeeC-------c
Q 039338          363 Q--VLVM-GSMSPA------ELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDD-------E  426 (493)
Q Consensus       363 ~--V~~~-g~~~~~------~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~-------~  426 (493)
                      +  |+|+ ++++..      ++.++|+.||++|+||.+ ||||++++|||+||+|||+++.+|.. +.+.++       .
T Consensus       491 rVKVIf~P~~L~~~d~lf~~d~~~~~~~advfV~PS~~-EgfGl~~LEAmA~G~PvI~s~~gG~~-d~V~dg~~~~~~~~  568 (725)
T 3nb0_A          491 RVKMIFHPEFLNANNPILGLDYDEFVRGCHLGVFPSYY-EPWGYTPAECTVMGVPSITTNVSGFG-SYMEDLIETNQAKD  568 (725)
T ss_dssp             SEEEEECCSCCCTTCSSSCCCHHHHHHHCSEEECCCSS-BSSCHHHHHHHHTTCCEEEETTBHHH-HHHHTTSCHHHHHH
T ss_pred             ceeEEEeccccCCCCccchhHHHHHHhhceEEEecccc-CCCCHHHHHHHHcCCCEEEeCCCChh-hhhhccccccCCCC
Confidence            2  4555 566654      589999999999999965 99999999999999999999999998 777664       4


Q ss_pred             ceEEEC---C-CHHHHHHHHHHHH----HcCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhccc
Q 039338          427 FGFMFA---P-NVESLHKTLEAAV----SEGPMRLAQRGEACRQYAASMFTANKMALAYERLFLCIKNETF  489 (493)
Q Consensus       427 ~G~~~~---~-d~~~l~~~i~~ll----~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~i~~~~~  489 (493)
                      +|+++.   + |+++++++|.+++    +.++..+..+++++++.++ .|+|++++++|+++|++++.+..
T Consensus       569 tG~lV~~rd~~d~ee~aeaLa~aL~~f~~~d~~~r~~mr~~ar~~A~-~FSWe~iA~~Yl~~Ye~aL~~~~  638 (725)
T 3nb0_A          569 YGIYIVDRRFKAPDESVEQLVDYMEEFVKKTRRQRINQRNATEALSD-LLDWKRMGLEYVKARQLALRRGY  638 (725)
T ss_dssp             TTEEEECCSSSCHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHGGG-GGBHHHHHHHHHHHHHHHHHHHC
T ss_pred             ceEEEeCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHHHHHHhhcc
Confidence            798884   3 5665555555554    4447778899998887775 59999999999999999987643

>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3

Probab=99.95  E-value=1.8e-27  Score=233.12  Aligned_cols=343  Identities=10%  Similarity=0.008  Sum_probs=221.0

Q ss_pred             eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhC-CCEEEEEecCCCCCCCCCCccccCCCCCCCCCCc-eEeecCCC-Cc
Q 039338           84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARR-GHRVHIFTSPVDNINSPSISHQENDDGSNNKYPL-LHFHEGEA-DK  160 (493)
Q Consensus        84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~-G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~  160 (493)
                      |||++++...|      +. .....++++|.++ ||+|.+++.....  .........     .+... +....... ..
T Consensus         6 mkIl~v~~~~~------~~-~~~~~l~~~L~~~~g~~v~~~~~~~~~--~~~~~~~~~-----~~~~~~~~~~~~~~~~~   71 (376)
T 1v4v_A            6 KRVVLAFGTRP------EA-TKMAPVYLALRGIPGLKPLVLLTGQHR--EQLRQALSL-----FGIQEDRNLDVMQERQA   71 (376)
T ss_dssp             EEEEEEECSHH------HH-HHHHHHHHHHHTSTTEEEEEEECSSCH--HHHHHHHHT-----TTCCCSEECCCCSSCCC
T ss_pred             eEEEEEEeccH------HH-HHHHHHHHHHHhCCCCceEEEEcCCcH--HHHHHHHHH-----cCCCcccccccCCCCcc
Confidence            89999997432      11 1356789999998 8998887654321  100000000     01110 11110000 00


Q ss_pred             c--ccccchHHHHHHhcCCCCcEEEeCccc---hhH---HhhhccCcEEEEeccchhhhhhhhhhhhhhcCCCCccchHh
Q 039338          161 W--RYSKGWEQFDEENQREPFDVVHSESVA---LPH---WLARNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAF  232 (493)
Q Consensus       161 ~--~~~~~~~~~~~~~~~~~~DiI~~~~~~---~~~---~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (493)
                      .  ........+.+.+++.+||+||+|+..   +..   ....++| ++...++....    ..+.              
T Consensus        72 ~~~~~~~~~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~a~~~~ip-~v~~~~~~~~~----~~~~--------------  132 (376)
T 1v4v_A           72 LPDLAARILPQAARALKEMGADYVLVHGDTLTTFAVAWAAFLEGIP-VGHVEAGLRSG----NLKE--------------  132 (376)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCSEEEEESSCHHHHHHHHHHHHTTCC-EEEETCCCCCS----CTTS--------------
T ss_pred             HHHHHHHHHHHHHHHHHHcCCCEEEEeCChHHHHHHHHHHHHhCCC-EEEEeCCCccc----cccC--------------
Confidence            0  011233456667778899999998542   221   1223567 65443332100    0000              


Q ss_pred             HhHHHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCc-cCCCccCCcccchhhhhhhCCCCCCc
Q 039338          233 NKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGI-NENEYGVDLSLGQSFRSRIGIPKNAS  311 (493)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngv-d~~~~~~~~~~~~~~r~~~~i~~~~~  311 (493)
                       ........+     .+.+.+|.++++|+..++.+.+ +|++.+++.+++|++ |...+...   ...+++++  + +++
T Consensus       133 -~~~~~~~~~-----~~~~~~~~~~~~s~~~~~~l~~-~g~~~~ki~vi~n~~~d~~~~~~~---~~~~~~~~--~-~~~  199 (376)
T 1v4v_A          133 -PFPEEANRR-----LTDVLTDLDFAPTPLAKANLLK-EGKREEGILVTGQTGVDAVLLAAK---LGRLPEGL--P-EGP  199 (376)
T ss_dssp             -STTHHHHHH-----HHHHHCSEEEESSHHHHHHHHT-TTCCGGGEEECCCHHHHHHHHHHH---HCCCCTTC--C-SSC
T ss_pred             -CCchHHHHH-----HHHHHhceeeCCCHHHHHHHHH-cCCCcceEEEECCchHHHHhhhhh---hhHHHHhc--C-CCC
Confidence             000011111     2345689999999999999987 588888999999975 43222111   11223333  2 344


Q ss_pred             EEEEEecccccccChHHHHHHHHHHHhhCCCeEEEEE-eCCC-cHHHHhhh---cCcEEEecCCCHHHHHHHHHHcCEEE
Q 039338          312 LVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVA-GSGP-WEQRYKDF---GHQVLVMGSMSPAELRAFYNAIDIFV  386 (493)
Q Consensus       312 ~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~-G~g~-~~~~~~~l---~~~V~~~g~~~~~~~~~~~~~adv~v  386 (493)
                      ++++++||+...||++.+++|++.+.++.++++++++ |+++ ..+.++++   .++|.|+|+++..++.++|+.||++|
T Consensus       200 ~vl~~~gr~~~~k~~~~ll~a~~~l~~~~~~~~lv~~~g~~~~~~~~l~~~~~~~~~v~~~g~~g~~~~~~~~~~ad~~v  279 (376)
T 1v4v_A          200 YVTVTMHRRENWPLLSDLAQALKRVAEAFPHLTFVYPVHLNPVVREAVFPVLKGVRNFVLLDPLEYGSMAALMRASLLLV  279 (376)
T ss_dssp             EEEECCCCGGGGGGHHHHHHHHHHHHHHCTTSEEEEECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHTEEEEE
T ss_pred             EEEEEeCcccchHHHHHHHHHHHHHHhhCCCeEEEEECCCCHHHHHHHHHHhccCCCEEEECCCCHHHHHHHHHhCcEEE
Confidence            7778899998888999999999999888888998886 7665 35555544   26899999998889999999999999


Q ss_pred             eCCCCCCCCChHHHHHHHcCCcEEec-CCCCCccceeeeCcceEEECCCHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHH
Q 039338          387 NPTLRPQGLDLTLMEAMMSGKPVMAS-RFPSIKGTIVVDDEFGFMFAPNVESLHKTLEAAVSEGPMRLAQRGEACRQYAA  465 (493)
Q Consensus       387 ~ps~~~eg~~~~~~EAm~~G~PvI~s-~~~~~~~e~v~~~~~G~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~  465 (493)
                      .||   +  | .++|||++|+|||++ +.++.. +++. +++|++++.|+++|+++|.++++| ++.+++|++++     
T Consensus       280 ~~S---~--g-~~lEA~a~G~PvI~~~~~~~~~-~~~~-~g~g~lv~~d~~~la~~i~~ll~d-~~~~~~~~~~~-----  345 (376)
T 1v4v_A          280 TDS---G--G-LQEEGAALGVPVVVLRNVTERP-EGLK-AGILKLAGTDPEGVYRVVKGLLEN-PEELSRMRKAK-----  345 (376)
T ss_dssp             ESC---H--H-HHHHHHHTTCCEEECSSSCSCH-HHHH-HTSEEECCSCHHHHHHHHHHHHTC-HHHHHHHHHSC-----
T ss_pred             ECC---c--C-HHHHHHHcCCCEEeccCCCcch-hhhc-CCceEECCCCHHHHHHHHHHHHhC-hHhhhhhcccC-----
Confidence            988   3  3 388999999999987 467776 6654 458999866999999999999998 88888888643     


Q ss_pred             HhcCHHHHHHHHHHHHHHHhh
Q 039338          466 SMFTANKMALAYERLFLCIKN  486 (493)
Q Consensus       466 ~~fs~~~~~~~~~~~~~~i~~  486 (493)
                      ..|.+...++++.+++.++++
T Consensus       346 ~~~~~~~~~~~i~~~i~~~~~  366 (376)
T 1v4v_A          346 NPYGDGKAGLMVARGVAWRLG  366 (376)
T ss_dssp             CSSCCSCHHHHHHHHHHHHTT
T ss_pred             CCCCCChHHHHHHHHHHHHhc
Confidence            336666667777777776654

>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}

Probab=99.95  E-value=7.8e-27  Score=200.82  Aligned_cols=158  Identities=20%  Similarity=0.362  Sum_probs=133.4

Q ss_pred             cEEEEEecccccccChHHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhhh----cCcEEEecCCCHHHHHHHHHHcCEEE
Q 039338          311 SLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDF----GHQVLVMGSMSPAELRAFYNAIDIFV  386 (493)
Q Consensus       311 ~~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~l----~~~V~~~g~~~~~~~~~~~~~adv~v  386 (493)
                      +++|+|+||+.+.||++.+++++..+++. ++++|+++|+|+..+.++++    +.+|.+ |+++++++.++|+.||++|
T Consensus         2 ~~~i~~~G~~~~~Kg~~~li~a~~~l~~~-~~~~l~i~G~g~~~~~~~~~~~~~~~~v~~-g~~~~~~~~~~~~~adv~v   79 (166)
T 3qhp_A            2 PFKIAMVGRYSNEKNQSVLIKAVALSKYK-QDIVLLLKGKGPDEKKIKLLAQKLGVKAEF-GFVNSNELLEILKTCTLYV   79 (166)
T ss_dssp             CEEEEEESCCSTTTTHHHHHHHHHTCTTG-GGEEEEEECCSTTHHHHHHHHHHHTCEEEC-CCCCHHHHHHHHTTCSEEE
T ss_pred             ceEEEEEeccchhcCHHHHHHHHHHhccC-CCeEEEEEeCCccHHHHHHHHHHcCCeEEE-eecCHHHHHHHHHhCCEEE
Confidence            47899999999999999999999998543 79999999999877666554    358889 9999999999999999999


Q ss_pred             eCCCCCCCCChHHHHHHHcCC-cEEec-CCCCCccceeeeCcceEEECC-CHHHHHHHHHHHHHcCcHHHHHHHHHHHHH
Q 039338          387 NPTLRPQGLDLTLMEAMMSGK-PVMAS-RFPSIKGTIVVDDEFGFMFAP-NVESLHKTLEAAVSEGPMRLAQRGEACRQY  463 (493)
Q Consensus       387 ~ps~~~eg~~~~~~EAm~~G~-PvI~s-~~~~~~~e~v~~~~~G~~~~~-d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~  463 (493)
                      +||. .|++|++++|||++|+ |||++ +.++.. +++.++.+  ++++ |+++++++|.+++++ ++.+++++++++++
T Consensus        80 ~ps~-~e~~~~~~~Eama~G~vPvi~~~~~~~~~-~~~~~~~~--~~~~~~~~~l~~~i~~l~~~-~~~~~~~~~~~~~~  154 (166)
T 3qhp_A           80 HAAN-VESEAIACLEAISVGIVPVIANSPLSATR-QFALDERS--LFEPNNAKDLSAKIDWWLEN-KLERERMQNEYAKS  154 (166)
T ss_dssp             ECCC-SCCCCHHHHHHHHTTCCEEEECCTTCGGG-GGCSSGGG--EECTTCHHHHHHHHHHHHHC-HHHHHHHHHHHHHH
T ss_pred             ECCc-ccCccHHHHHHHhcCCCcEEeeCCCCchh-hhccCCce--EEcCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHH
Confidence            9996 5999999999999998 99994 567776 77776644  7777 999999999999998 99999999999999


Q ss_pred             HHHhcCHHHHHHH
Q 039338          464 AASMFTANKMALA  476 (493)
Q Consensus       464 ~~~~fs~~~~~~~  476 (493)
                      + ++|+|++++++
T Consensus       155 ~-~~~s~~~~~~~  166 (166)
T 3qhp_A          155 A-LNYTLENSVIQ  166 (166)
T ss_dssp             H-HHHC-------
T ss_pred             H-HHCChhhhhcC
Confidence            9 56999998764

>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*

Probab=99.94  E-value=1.5e-25  Score=220.47  Aligned_cols=278  Identities=14%  Similarity=0.102  Sum_probs=206.5

Q ss_pred             CCCcEEEeCccc---hhHHhhhccC--cEEEEeccchhhhhhhhhhhhhhcCCCCccchHhHhHHHHHHHHHHHHHHhhc
Q 039338          177 EPFDVVHSESVA---LPHWLARNVT--NLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQGVMLKVLNEIRFFN  251 (493)
Q Consensus       177 ~~~DiI~~~~~~---~~~~~~~~~p--~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (493)
                      ..-|+|.+|++.   ++.++....|  ++.+.+|-+++.   +.++..+.            ..+...+.      +.+-
T Consensus       148 ~~~D~VwVhDYhL~llp~~lR~~~~~~~igfFlHiPfPs---~e~f~~Lp------------~~~r~ell------~gll  206 (496)
T 3t5t_A          148 SADPVYLVHDYQLVGVPALLREQRPDAPILLFVHIPWPS---ADYWRILP------------KEIRTGIL------HGML  206 (496)
T ss_dssp             CSSCEEEEESGGGTTHHHHHHHHCTTSCEEEECCSCCCC---HHHHTTSC------------HHHHHHHH------HHHT
T ss_pred             CCCCEEEEeCccHhHHHHHHHhhCCCCeEEEEEcCCCCC---HHHHhhCc------------HhHHHHHH------HHHH
Confidence            357899999874   3455544333  388888876432   22222210            00112221      3456


Q ss_pred             cCCeEEEcChhHHHHHHH----Hh-CCC-------------CCcEEEecCCccCCCccCCcc-cchhhhhhhCCCCCCcE
Q 039338          252 KYAHHVAISDSCGEMLRD----VY-QIP-------------SERVHVILNGINENEYGVDLS-LGQSFRSRIGIPKNASL  312 (493)
Q Consensus       252 ~~d~ii~~S~~~~~~~~~----~~-~~~-------------~~~v~vi~ngvd~~~~~~~~~-~~~~~r~~~~i~~~~~~  312 (493)
                      .+|.|.+.+......+.+    .. |.+             ..++.++|+|||.+.|.+... ....+|++++   ++ .
T Consensus       207 ~~DligF~t~~y~~~Fl~~~~r~l~g~~~~~~~~~v~~~gr~v~v~viP~GID~~~f~~~~~~~~~~lr~~~~---~~-~  282 (496)
T 3t5t_A          207 PATTIGFFADRWCRNFLESVADLLPDARIDREAMTVEWRGHRTRLRTMPLGYSPLTLDGRNPQLPEGIEEWAD---GH-R  282 (496)
T ss_dssp             TSSEEEESSHHHHHHHHHHHHHHCTTCEEETTTTEEEETTEEEEEEECCCCBCGGGC----CCCCTTHHHHHT---TS-E
T ss_pred             hCCEEEEecHHHHHHHHHHHHHHhcCCcccccCCeEEECCEEEEEEEeccEeCHHHhchhhHHHHHHHHHHhC---Cc-e
Confidence            899999999987776543    23 321             136789999999998876542 2356778876   33 6


Q ss_pred             EEEEecccccccChHHHHHHHHHHHhhCCC---eEEEEEeC-----CCcH----HHHhhhc---------CcEEEecCCC
Q 039338          313 VLGVAGRLVKDKGHPLLHEAFSKLMVKYPD---VYLIVAGS-----GPWE----QRYKDFG---------HQVLVMGSMS  371 (493)
Q Consensus       313 ~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~---~~l~i~G~-----g~~~----~~~~~l~---------~~V~~~g~~~  371 (493)
                      +|+++||+++.||++.+++|+ ++.+++|+   +.|+++|.     ++..    +.++++.         ..|.|+|.++
T Consensus       283 lIl~VgRLd~~KGi~~lL~Af-~ll~~~P~~~~v~Lv~Vg~psr~~~~~y~~l~~~l~~lv~~in~~~g~~~V~f~g~v~  361 (496)
T 3t5t_A          283 LVVHSGRTDPIKNAERAVRAF-VLAARGGGLEKTRMLVRMNPNRLYVPANADYVHRVETAVAEANAELGSDTVRIDNDND  361 (496)
T ss_dssp             EEEEEEESSGGGCHHHHHHHH-HHHHHTSSCTTEEEEEEEECCCTTSHHHHHHHHHHHHHHHHHHHHHCTTSEEEEECCC
T ss_pred             EEEEcccCccccCHHHHHHHH-HHHHhCcccceEEEEEEECCCCCCchHHHHHHHHHHHHHHHhccccCCcCEEEeCCCC
Confidence            778999999999999999999 88888875   56887763     2222    2233331         1699999999


Q ss_pred             HHHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcC---CcEEecCCCCCccceeeeCcceEEECC-CHHHHHHHHHHHHH
Q 039338          372 PAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSG---KPVMASRFPSIKGTIVVDDEFGFMFAP-NVESLHKTLEAAVS  447 (493)
Q Consensus       372 ~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G---~PvI~s~~~~~~~e~v~~~~~G~~~~~-d~~~l~~~i~~ll~  447 (493)
                      .+++..+|+.||++|+||.+ ||||++.+|||+||   .|+|+|+.+|.. +.+  +.+|++++| |+++++++|.+++.
T Consensus       362 ~~el~aly~~ADv~vv~Slr-EGfgLv~~EamA~~~~~g~lVlSe~aGa~-~~l--~~~allVnP~D~~~lA~AI~~aL~  437 (496)
T 3t5t_A          362 VNHTIACFRRADLLIFNSTV-DGQNLSTFEAPLVNERDADVILSETCGAA-EVL--GEYCRSVNPFDLVEQAEAISAALA  437 (496)
T ss_dssp             HHHHHHHHHHCSEEEECCSS-BSCCSHHHHHHHHCSSCCEEEEETTBTTH-HHH--GGGSEEECTTBHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhccEEEECccc-ccCChhHHHHHHhCCCCCCEEEeCCCCCH-HHh--CCCEEEECCCCHHHHHHHHHHHHc
Confidence            99999999999999999987 99999999999997   899999999888 444  347999999 99999999999999


Q ss_pred             cCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHh
Q 039338          448 EGPMRLAQRGEACRQYAASMFTANKMALAYERLFLCIK  485 (493)
Q Consensus       448 ~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~i~  485 (493)
                      +++++++++.++.++++.+ ++....++.+++-+....
T Consensus       438 m~~~er~~r~~~~~~~V~~-~d~~~W~~~fl~~L~~~~  474 (496)
T 3t5t_A          438 AGPRQRAEAAARRRDAARP-WTLEAWVQAQLDGLAADH  474 (496)
T ss_dssp             CCHHHHHHHHHHHHHHHTT-CBHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHH-CCHHHHHHHHHHHHhhcc
Confidence            9778899999999999977 899999999988887653

>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*

Probab=99.93  E-value=5.3e-26  Score=221.47  Aligned_cols=304  Identities=13%  Similarity=0.072  Sum_probs=204.3

Q ss_pred             EEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCCCccccc
Q 039338           85 KIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEADKWRYS  164 (493)
Q Consensus        85 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (493)
                      +|.+.+.       ..|..+.+..|+++|.++| +|.+.+.....  ......      ...+.......   +  +   
T Consensus        42 ~iwih~~-------s~G~~~~~~~L~~~L~~~~-~v~v~~~~~~~--~~~~~~------~~~~v~~~~~~---p--~---   97 (374)
T 2xci_A           42 ALWVHTA-------SIGEFNTFLPILKELKREH-RILLTYFSPRA--REYLKT------KSDFYDCLHPL---P--L---   97 (374)
T ss_dssp             CEEEECS-------SHHHHHHHHHHHHHHHHHS-CEEEEESCGGG--HHHHHT------TGGGCSEEEEC---C--C---
T ss_pred             CEEEEcC-------CHHHHHHHHHHHHHHHhcC-CEEEEEcCCcH--HHHHHH------hcccccceeEC---C--C---
Confidence            4766653       3577888999999999998 88766654322  100000      00011100111   1  1   


Q ss_pred             cchHHHHHHhcCCCCcEEEeCccc-hhHHh--hhccCcEEEEeccchhhhhhhhhhhhhhcCCCCccchHhHhHHHHHHH
Q 039338          165 KGWEQFDEENQREPFDVVHSESVA-LPHWL--ARNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQGVML  241 (493)
Q Consensus       165 ~~~~~~~~~~~~~~~DiI~~~~~~-~~~~~--~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (493)
                      .....+.+.+++.+||+||++... .+..+  ... | ++...+....                        ..    + 
T Consensus        98 ~~~~~l~~~l~~~~pDiv~~~~~~~~~~~~~~~~~-p-~~~~~~~~~~------------------------~~----~-  146 (374)
T 2xci_A           98 DNPFSVKRFEELSKPKALIVVEREFWPSLIIFTKV-P-KILVNAYAKG------------------------SL----I-  146 (374)
T ss_dssp             SSHHHHHHHHHHHCCSEEEEESCCCCHHHHHHCCS-C-EEEEEECCCC------------------------CH----H-
T ss_pred             CCHHHHHHHHHHhCCCEEEEECccCcHHHHHHHhC-C-EEEEEeecCc------------------------hH----H-
Confidence            123456666667789999875332 11111  122 5 5443332100                        01    1 


Q ss_pred             HHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCCCCCCcEEEEEecccc
Q 039338          242 KVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVAGRLV  321 (493)
Q Consensus       242 ~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Gr~~  321 (493)
                          .+.+++++|.++++|+..++.+.+ +|++  ++.+++|+.    |.......    ..  +  .. .++++.|+  
T Consensus       147 ----~~~~~~~~d~ii~~S~~~~~~l~~-~g~~--ki~vi~n~~----f~~~~~~~----~~--l--~~-~vi~~~~~--  204 (374)
T 2xci_A          147 ----EKILSKKFDLIIMRTQEDVEKFKT-FGAK--RVFSCGNLK----FICQKGKG----IK--L--KG-EFIVAGSI--  204 (374)
T ss_dssp             ----HHHHHTTCSEEEESCHHHHHHHHT-TTCC--SEEECCCGG----GCCCCCSC----CC--C--SS-CEEEEEEE--
T ss_pred             ----HHHHHHhCCEEEECCHHHHHHHHH-cCCC--eEEEcCCCc----cCCCcChh----hh--h--cC-CEEEEEeC--
Confidence                125578899999999999999988 5776  899999973    21111100    11  1  11 34556664  


Q ss_pred             cccChHHHHHHHHHHHhhCCCeEEEEEeCCCcH-HHHhhh----c----------CcEEEecCCCHHHHHHHHHHcCEEE
Q 039338          322 KDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWE-QRYKDF----G----------HQVLVMGSMSPAELRAFYNAIDIFV  386 (493)
Q Consensus       322 ~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~-~~~~~l----~----------~~V~~~g~~~~~~~~~~~~~adv~v  386 (493)
                      ..||.+.+++|++.+.++.|+++|+|+|+|+.+ +.++++    +          .+|.+.|+.  +|+..+|+.||+++
T Consensus       205 ~~k~~~~ll~A~~~l~~~~p~~~lvivG~g~~~~~~l~~~~~~~gl~~~~~~~~~~~v~~~~~~--~dl~~~y~~aDv~v  282 (374)
T 2xci_A          205 HTGEVEIILKAFKEIKKTYSSLKLILVPRHIENAKIFEKKARDFGFKTSFFENLEGDVILVDRF--GILKELYPVGKIAI  282 (374)
T ss_dssp             CGGGHHHHHHHHHHHHTTCTTCEEEEEESSGGGHHHHHHHHHHTTCCEEETTCCCSSEEECCSS--SCHHHHGGGEEEEE
T ss_pred             CCchHHHHHHHHHHHHhhCCCcEEEEECCCHHHHHHHHHHHHHCCCceEEecCCCCcEEEECCH--HHHHHHHHhCCEEE
Confidence            468999999999999988899999999998865 344432    2          257788876  79999999999988


Q ss_pred             eCCCCCCCCChHHHHHHHcCCcEEec-CCCCCccceeeeC-cceEEECC-CHHHHHHHHHHHHHcCcHHHHHHHHHHHHH
Q 039338          387 NPTLRPQGLDLTLMEAMMSGKPVMAS-RFPSIKGTIVVDD-EFGFMFAP-NVESLHKTLEAAVSEGPMRLAQRGEACRQY  463 (493)
Q Consensus       387 ~ps~~~eg~~~~~~EAm~~G~PvI~s-~~~~~~~e~v~~~-~~G~~~~~-d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~  463 (493)
                      +|+...|++|++++|||+||+|||++ +.++.+ |++.+. .+|+++++ |+++|+++|.++++|  +.+++|+++++++
T Consensus       283 l~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~-e~~~~~~~~G~l~~~~d~~~La~ai~~ll~d--~~r~~mg~~ar~~  359 (374)
T 2xci_A          283 VGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVN-DLKEFLEKEGAGFEVKNETELVTKLTELLSV--KKEIKVEEKSREI  359 (374)
T ss_dssp             ECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSH-HHHHHHHHTTCEEECCSHHHHHHHHHHHHHS--CCCCCHHHHHHHH
T ss_pred             ECCcccCCCCcCHHHHHHhCCCEEECCCccChH-HHHHHHHHCCCEEEeCCHHHHHHHHHHHHhH--HHHHHHHHHHHHH
Confidence            87654467889999999999999975 677877 766552 46888888 999999999999986  6788999999999


Q ss_pred             HHHhcCH
Q 039338          464 AASMFTA  470 (493)
Q Consensus       464 ~~~~fs~  470 (493)
                      +++++..
T Consensus       360 ~~~~~ga  366 (374)
T 2xci_A          360 KGCYLEK  366 (374)
T ss_dssp             HHHHHHH
T ss_pred             HHhcccH
Confidence            9876443

>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*

Probab=99.92  E-value=1.2e-22  Score=193.27  Aligned_cols=240  Identities=12%  Similarity=0.031  Sum_probs=172.5

Q ss_pred             CCCCcEEEeCccch-----hH-Hhhh----ccCcEEEEeccchhhhhhhhhhhhhhcCCCCccchHhHhHHHHHHHHHHH
Q 039338          176 REPFDVVHSESVAL-----PH-WLAR----NVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQGVMLKVLN  245 (493)
Q Consensus       176 ~~~~DiI~~~~~~~-----~~-~~~~----~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (493)
                      -.++|+|+++++.+     .. ++.+    +.| ++..+||+++.....                   ....     ...
T Consensus        72 ~~~~DvIi~q~P~~~~~~~~~~~~~~lk~~~~k-~i~~ihDl~pl~~~~-------------------~~~~-----~~~  126 (339)
T 3rhz_A           72 LRHGDVVIFQTPTWNTTEFDEKLMNKLKLYDIK-IVLFIHDVVPLMFSG-------------------NFYL-----MDR  126 (339)
T ss_dssp             CCTTCEEEEEECCSSCHHHHHHHHHHHTTSSCE-EEEEESCCHHHHCGG-------------------GGGG-----HHH
T ss_pred             CCCCCEEEEeCCCcchhhHHHHHHHHHHhcCCE-EEEEecccHHhhCcc-------------------chhh-----HHH
Confidence            45799999987643     11 1221    345 999999987643211                   0000     013


Q ss_pred             HHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCCCCCCcEEEEEecccccccC
Q 039338          246 EIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVAGRLVKDKG  325 (493)
Q Consensus       246 ~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Gr~~~~Kg  325 (493)
                      |+.+++++|.|+++|+.+++.+.+ +|++..++.++++. |...  +.+         ...+ ..+++|+|+|+++....
T Consensus       127 E~~~y~~aD~Ii~~S~~~~~~l~~-~G~~~~ki~~~~~~-~~~~--~~~---------~~~~-~~~~~i~yaG~l~k~~~  192 (339)
T 3rhz_A          127 TIAYYNKADVVVAPSQKMIDKLRD-FGMNVSKTVVQGMW-DHPT--QAP---------MFPA-GLKREIHFPGNPERFSF  192 (339)
T ss_dssp             HHHHHTTCSEEEESCHHHHHHHHH-TTCCCSEEEECCSC-CCCC--CCC---------CCCC-EEEEEEEECSCTTTCGG
T ss_pred             HHHHHHHCCEEEECCHHHHHHHHH-cCCCcCceeecCCC-CccC--ccc---------cccc-CCCcEEEEeCCcchhhH
Confidence            568899999999999999999988 68876777655442 2110  000         0112 22378899999985322


Q ss_pred             hHHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhhhcCcEEEecCCCHHHHHHHHHHcCEEEeCCCC------CCCCChHH
Q 039338          326 HPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDFGHQVLVMGSMSPAELRAFYNAIDIFVNPTLR------PQGLDLTL  399 (493)
Q Consensus       326 ~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~l~~~V~~~g~~~~~~~~~~~~~adv~v~ps~~------~eg~~~~~  399 (493)
                      ++       .+   .++++|+++|+|+.+    ++. ||.|+|++|++++..+++++|+.++....      ..++|.++
T Consensus       193 L~-------~l---~~~~~f~ivG~G~~~----~l~-nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl  257 (339)
T 3rhz_A          193 VK-------EW---KYDIPLKVYTWQNVE----LPQ-NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKL  257 (339)
T ss_dssp             GG-------GC---CCSSCEEEEESCCCC----CCT-TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHH
T ss_pred             HH-------hC---CCCCeEEEEeCCccc----CcC-CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHH
Confidence            21       11   378999999999875    354 99999999999999999999998875210      13579999


Q ss_pred             HHHHHcCCcEEecCCCCCccceeeeCcceEEECCCHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHhcCHHHHHH
Q 039338          400 MEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAPNVESLHKTLEAAVSEGPMRLAQRGEACRQYAASMFTANKMAL  475 (493)
Q Consensus       400 ~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~  475 (493)
                      +||||+|+|||+++.++.. +++.++++|+.++ +.++++++|.++.   ++.+++|++++++.+++ +++..+.+
T Consensus       258 ~eymA~G~PVI~~~~~~~~-~~v~~~~~G~~~~-~~~e~~~~i~~l~---~~~~~~m~~na~~~a~~-~~~~~f~k  327 (339)
T 3rhz_A          258 GSFLAAGIPVIVQEGIANQ-ELIENNGLGWIVK-DVEEAIMKVKNVN---EDEYIELVKNVRSFNPI-LRKGFFTR  327 (339)
T ss_dssp             HHHHHHTCCEEEETTCTTT-HHHHHHTCEEEES-SHHHHHHHHHHCC---HHHHHHHHHHHHHHTHH-HHTTHHHH
T ss_pred             HHHHHcCCCEEEccChhHH-HHHHhCCeEEEeC-CHHHHHHHHHHhC---HHHHHHHHHHHHHHHHH-hhccHHHH
Confidence            9999999999999999988 9999999999998 7888998888762   56789999999988665 44444433

>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8

Probab=99.92  E-value=1.4e-24  Score=188.52  Aligned_cols=146  Identities=23%  Similarity=0.270  Sum_probs=124.9

Q ss_pred             CCCCCCcEEEEEecccccccChHHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhh--------hcCcEEEecCCCHHHHH
Q 039338          305 GIPKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKD--------FGHQVLVMGSMSPAELR  376 (493)
Q Consensus       305 ~i~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~--------l~~~V~~~g~~~~~~~~  376 (493)
                      .++.++ .+|+|+|++.+.||++.+++++..+    ++++|+++|.++..+.+++        +.++|.|+|+++++++.
T Consensus        18 ~~~~~~-~~i~~~G~~~~~Kg~~~li~a~~~l----~~~~l~i~G~~~~~~~l~~~~~~~~~~l~~~v~~~g~~~~~e~~   92 (177)
T 2f9f_A           18 KFKCYG-DFWLSVNRIYPEKRIELQLEVFKKL----QDEKLYIVGWFSKGDHAERYARKIMKIAPDNVKFLGSVSEEELI   92 (177)
T ss_dssp             CCCCCC-SCEEEECCSSGGGTHHHHHHHHHHC----TTSCEEEEBCCCTTSTHHHHHHHHHHHSCTTEEEEESCCHHHHH
T ss_pred             ccCCCC-CEEEEEeccccccCHHHHHHHHHhC----CCcEEEEEecCccHHHHHHHHHhhhcccCCcEEEeCCCCHHHHH
Confidence            345555 5678999999999999999999988    5889999998876443332        23699999999999999


Q ss_pred             HHHHHcCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCccceeeeCcceEEECC-CHHHHHHHHHHHHHcCcHH-HH
Q 039338          377 AFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAP-NVESLHKTLEAAVSEGPMR-LA  454 (493)
Q Consensus       377 ~~~~~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~~-d~~~l~~~i~~ll~~~~~~-~~  454 (493)
                      ++|+.||++|+|+. .|++|++++|||++|+|||+++.++.. +++.++.+|+++ + |+++++++|.+++++ ++. ++
T Consensus        93 ~~~~~adi~v~ps~-~e~~~~~~~Eama~G~PvI~~~~~~~~-e~i~~~~~g~~~-~~d~~~l~~~i~~l~~~-~~~~~~  168 (177)
T 2f9f_A           93 DLYSRCKGLLCTAK-DEDFGLTPIEAMASGKPVIAVNEGGFK-ETVINEKTGYLV-NADVNEIIDAMKKVSKN-PDKFKK  168 (177)
T ss_dssp             HHHHHCSEEEECCS-SCCSCHHHHHHHHTTCCEEEESSHHHH-HHCCBTTTEEEE-CSCHHHHHHHHHHHHHC-TTTTHH
T ss_pred             HHHHhCCEEEeCCC-cCCCChHHHHHHHcCCcEEEeCCCCHH-HHhcCCCccEEe-CCCHHHHHHHHHHHHhC-HHHHHH
Confidence            99999999999996 599999999999999999999999888 889999999999 6 999999999999999 554 44


Q ss_pred             HHHHH
Q 039338          455 QRGEA  459 (493)
Q Consensus       455 ~~~~~  459 (493)
                      +++++
T Consensus       169 ~~~~~  173 (177)
T 2f9f_A          169 DCFRR  173 (177)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            44333

>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}

Probab=99.91  E-value=7.8e-24  Score=207.51  Aligned_cols=334  Identities=13%  Similarity=0.069  Sum_probs=216.8

Q ss_pred             CCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhC-CCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCCC
Q 039338           81 KFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARR-GHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEAD  159 (493)
Q Consensus        81 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~-G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (493)
                      ++.|||++|+..-      .|.. .+..++++|.++ |+++.++.+....  +-..+..+.   ... .+.........+
T Consensus        23 ~~m~ki~~v~Gtr------~~~~-~~a~li~~l~~~~~~~~~~~~tG~h~--~~~~~~~~~---~~i-~~~~~l~~~~~~   89 (396)
T 3dzc_A           23 NAMKKVLIVFGTR------PEAI-KMAPLVQQLCQDNRFVAKVCVTGQHR--EMLDQVLEL---FSI-TPDFDLNIMEPG   89 (396)
T ss_dssp             -CCEEEEEEECSH------HHHH-HHHHHHHHHHHCTTEEEEEEECCSSS--HHHHHHHHH---TTC-CCSEECCCCCTT
T ss_pred             CCCCeEEEEEecc------HhHH-HHHHHHHHHHhCCCCcEEEEEecccH--HHHHHHHHh---cCC-CCceeeecCCCC
Confidence            4457999999742      3433 357899999987 7898876665442  100000000   011 011111110011


Q ss_pred             ---ccccccchHHHHHHhcCCCCcEEEeCccc---hh---HHhhhccCcEEEEeccchhhhhhhhhhhhhhcCCCCccch
Q 039338          160 ---KWRYSKGWEQFDEENQREPFDVVHSESVA---LP---HWLARNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSL  230 (493)
Q Consensus       160 ---~~~~~~~~~~~~~~~~~~~~DiI~~~~~~---~~---~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~  230 (493)
                         ..........+.+.+++.+||+|++++..   ++   +....++| ++...++.....    ++             
T Consensus        90 ~~~~~~~~~~~~~l~~~l~~~kPDvVi~~g~~~~~~~~~~aa~~~~IP-v~h~~ag~rs~~----~~-------------  151 (396)
T 3dzc_A           90 QTLNGVTSKILLGMQQVLSSEQPDVVLVHGDTATTFAASLAAYYQQIP-VGHVEAGLRTGN----IY-------------  151 (396)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHCCSEEEEETTSHHHHHHHHHHHTTTCC-EEEETCCCCCSC----TT-------------
T ss_pred             CCHHHHHHHHHHHHHHHHHhcCCCEEEEECCchhHHHHHHHHHHhCCC-EEEEECCccccc----cc-------------
Confidence               11223455667777788899999998642   22   22234567 654444321100    00             


Q ss_pred             HhHhHHHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCc-cCCCccCCcc-c----chhhhhhh
Q 039338          231 AFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGI-NENEYGVDLS-L----GQSFRSRI  304 (493)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngv-d~~~~~~~~~-~----~~~~r~~~  304 (493)
                         ..+.....+.    ...+.+|.+++.|+..++.+.+ .|++++++.+++|++ |...+.+... .    ...+++++
T Consensus       152 ---~~~~~~~~r~----~~~~~a~~~~~~se~~~~~l~~-~G~~~~ki~vvGn~~~d~~~~~~~~~~~~~~~~~~~r~~l  223 (396)
T 3dzc_A          152 ---SPWPEEGNRK----LTAALTQYHFAPTDTSRANLLQ-ENYNAENIFVTGNTVIDALLAVREKIHTDMDLQATLESQF  223 (396)
T ss_dssp             ---SSTTHHHHHH----HHHHTCSEEEESSHHHHHHHHH-TTCCGGGEEECCCHHHHHHHHHHHHHHHCHHHHHHHHHTC
T ss_pred             ---cCCcHHHHHH----HHHHhcCEEECCCHHHHHHHHH-cCCCcCcEEEECCcHHHHHHHhhhhcccchhhHHHHHHHh
Confidence               0000111111    1134689999999999999987 699888999999854 4322221110 0    25677889


Q ss_pred             C-CCCCCcEEEEEeccccc-ccChHHHHHHHHHHHhhCCCeEEEEE-eCCC-cHHHHhhh---cCcEEEecCCCHHHHHH
Q 039338          305 G-IPKNASLVLGVAGRLVK-DKGHPLLHEAFSKLMVKYPDVYLIVA-GSGP-WEQRYKDF---GHQVLVMGSMSPAELRA  377 (493)
Q Consensus       305 ~-i~~~~~~~i~~~Gr~~~-~Kg~~~ll~a~~~l~~~~~~~~l~i~-G~g~-~~~~~~~l---~~~V~~~g~~~~~~~~~  377 (493)
                      | ++.++++++++.+|... .|+++.+++|+..+.+++|++++++. |.++ .++.++++   .++|.+.++++..++..
T Consensus       224 g~l~~~~~~vlv~~hR~~~~~~~~~~ll~A~~~l~~~~~~~~~v~~~g~~~~~~~~l~~~~~~~~~v~~~~~lg~~~~~~  303 (396)
T 3dzc_A          224 PMLDASKKLILVTGHRRESFGGGFERICQALITTAEQHPECQILYPVHLNPNVREPVNKLLKGVSNIVLIEPQQYLPFVY  303 (396)
T ss_dssp             TTCCTTSEEEEEECSCBCCCTTHHHHHHHHHHHHHHHCTTEEEEEECCBCHHHHHHHHHHTTTCTTEEEECCCCHHHHHH
T ss_pred             CccCCCCCEEEEEECCcccchhHHHHHHHHHHHHHHhCCCceEEEEeCCChHHHHHHHHHHcCCCCEEEeCCCCHHHHHH
Confidence            8 56666677767766543 47899999999999988889999885 5543 34455543   27899999999889999


Q ss_pred             HHHHcCEEEeCCCCCCCCChHHHHHHHcCCcEEec-CCCCCccceeeeCcceEEECCCHHHHHHHHHHHHHcCcHHHHHH
Q 039338          378 FYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMAS-RFPSIKGTIVVDDEFGFMFAPNVESLHKTLEAAVSEGPMRLAQR  456 (493)
Q Consensus       378 ~~~~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s-~~~~~~~e~v~~~~~G~~~~~d~~~l~~~i~~ll~~~~~~~~~~  456 (493)
                      +|+.||++|.+|    | | ..+|||++|+|+|++ +.++.+ |++.++ .+++++.|++++++++.++++| ++.+++|
T Consensus       304 l~~~ad~vv~~S----G-g-~~~EA~a~G~PvV~~~~~~~~~-e~v~~G-~~~lv~~d~~~l~~ai~~ll~d-~~~~~~m  374 (396)
T 3dzc_A          304 LMDRAHIILTDS----G-G-IQEEAPSLGKPVLVMRETTERP-EAVAAG-TVKLVGTNQQQICDALSLLLTD-PQAYQAM  374 (396)
T ss_dssp             HHHHCSEEEESC----S-G-GGTTGGGGTCCEEECCSSCSCH-HHHHHT-SEEECTTCHHHHHHHHHHHHHC-HHHHHHH
T ss_pred             HHHhcCEEEECC----c-c-HHHHHHHcCCCEEEccCCCcch-HHHHcC-ceEEcCCCHHHHHHHHHHHHcC-HHHHHHH
Confidence            999999999887    2 3 348999999999998 666666 777666 5777766899999999999999 8888888


Q ss_pred             HHHHHH
Q 039338          457 GEACRQ  462 (493)
Q Consensus       457 ~~~~~~  462 (493)
                      ++++..
T Consensus       375 ~~~~~~  380 (396)
T 3dzc_A          375 SQAHNP  380 (396)
T ss_dssp             HTSCCT
T ss_pred             hhccCC
Confidence            877644

>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*

Probab=99.91  E-value=1.5e-23  Score=207.91  Aligned_cols=341  Identities=13%  Similarity=0.021  Sum_probs=218.5

Q ss_pred             CCCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeec----
Q 039338           80 SKFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHE----  155 (493)
Q Consensus        80 ~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  155 (493)
                      ...+|||++++.      ..+|....+..|+++|+++||+|++++.....  . ....        .+...+.+..    
T Consensus        17 ~~~~MrIl~~~~------~~~Gh~~~~~~la~~L~~~GheV~v~~~~~~~--~-~~~~--------~g~~~~~~~~~~~~   79 (412)
T 3otg_A           17 EGRHMRVLFASL------GTHGHTYPLLPLATAARAAGHEVTFATGEGFA--G-TLRK--------LGFEPVATGMPVFD   79 (412)
T ss_dssp             -CCSCEEEEECC------SSHHHHGGGHHHHHHHHHTTCEEEEEECGGGH--H-HHHH--------TTCEEEECCCCHHH
T ss_pred             ccceeEEEEEcC------CCcccHHHHHHHHHHHHHCCCEEEEEccHHHH--H-HHHh--------cCCceeecCccccc
Confidence            456799999985      34777777889999999999999999975311  0 0000        0111111100    


Q ss_pred             ----------------------CCCCccccccc------hHHHHHHhcCCCCcEEEeCccchhHH---hhhccCcEEEEe
Q 039338          156 ----------------------GEADKWRYSKG------WEQFDEENQREPFDVVHSESVALPHW---LARNVTNLAVSW  204 (493)
Q Consensus       156 ----------------------~~~~~~~~~~~------~~~~~~~~~~~~~DiI~~~~~~~~~~---~~~~~p~~v~~~  204 (493)
                                            ...........      ...+.+.+++.+||+|+++...+...   ...++| ++.+.
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pDvVv~~~~~~~~~~aa~~~giP-~v~~~  158 (412)
T 3otg_A           80 GFLAALRIRFDTDSPEGLTPEQLSELPQIVFGRVIPQRVFDELQPVIERLRPDLVVQEISNYGAGLAALKAGIP-TICHG  158 (412)
T ss_dssp             HHHHHHHHHHSCSCCTTCCHHHHTTSHHHHHHTHHHHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHTCC-EEEEC
T ss_pred             chhhhhhhhhcccCCccCChhHhhHHHHHHHhccchHHHHHHHHHHHHhcCCCEEEECchhhHHHHHHHHcCCC-EEEec
Confidence                                  00000111111      25566667788999999886543322   234678 88888


Q ss_pred             ccchhhhhhhhhhhhhhcCCCCccchHhHhHHHHHHHHHHHHH-------HhhccCCeEEEcChhHHHHHHHHhCCCCCc
Q 039338          205 HGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQGVMLKVLNEI-------RFFNKYAHHVAISDSCGEMLRDVYQIPSER  277 (493)
Q Consensus       205 h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~  277 (493)
                      |+......                   ....+...+.+.....       ..+..+|.+++.++...+...+.....  .
T Consensus       159 ~~~~~~~~-------------------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~--~  217 (412)
T 3otg_A          159 VGRDTPDD-------------------LTRSIEEEVRGLAQRLGLDLPPGRIDGFGNPFIDIFPPSLQEPEFRARPR--R  217 (412)
T ss_dssp             CSCCCCSH-------------------HHHHHHHHHHHHHHHTTCCCCSSCCGGGGCCEEECSCGGGSCHHHHTCTT--E
T ss_pred             ccccCchh-------------------hhHHHHHHHHHHHHHcCCCCCcccccCCCCeEEeeCCHHhcCCcccCCCC--c
Confidence            87532110                   0112222222222110       112467888998887766655433211  1


Q ss_pred             EEEecCCccCCCccCCcccchhhhhhh--CCCCCCcEEEEEecccccccChHHHHHHHHHHHhhCCCeEEEEEeCC-CcH
Q 039338          278 VHVILNGINENEYGVDLSLGQSFRSRI--GIPKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSG-PWE  354 (493)
Q Consensus       278 v~vi~ngvd~~~~~~~~~~~~~~r~~~--~i~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g-~~~  354 (493)
                      ..+.+.+.+.     . .   . +.++  ..++++++++++.|++. .++.+.+.+++..+.+.  ++++++++.+ ...
T Consensus       218 ~~~~~~~~~~-----~-~---~-~~~~~~~~~~~~~~vlv~~G~~~-~~~~~~~~~~~~~l~~~--~~~~~~~~g~~~~~  284 (412)
T 3otg_A          218 HELRPVPFAE-----Q-G---D-LPAWLSSRDTARPLVYLTLGTSS-GGTVEVLRAAIDGLAGL--DADVLVASGPSLDV  284 (412)
T ss_dssp             EECCCCCCCC-----C-C---C-CCGGGGGSCTTSCEEEEECTTTT-CSCHHHHHHHHHHHHTS--SSEEEEECCSSCCC
T ss_pred             ceeeccCCCC-----C-C---C-CCCccccccCCCCEEEEEcCCCC-cCcHHHHHHHHHHHHcC--CCEEEEEECCCCCh
Confidence            1111111110     0 0   0 1112  22345568888999986 67888888888777653  5666666544 335


Q ss_pred             HHHhhhcCcEEEecCCCHHHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCC----CccceeeeCcceEE
Q 039338          355 QRYKDFGHQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPS----IKGTIVVDDEFGFM  430 (493)
Q Consensus       355 ~~~~~l~~~V~~~g~~~~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~----~~~e~v~~~~~G~~  430 (493)
                      +.++++.++|.+.|++   ++.++|+.||++|.++     .+.+++|||++|+|+|+.+.++    .. +.+.+.+.|++
T Consensus       285 ~~l~~~~~~v~~~~~~---~~~~~l~~ad~~v~~~-----g~~t~~Ea~a~G~P~v~~p~~~~q~~~~-~~v~~~g~g~~  355 (412)
T 3otg_A          285 SGLGEVPANVRLESWV---PQAALLPHVDLVVHHG-----GSGTTLGALGAGVPQLSFPWAGDSFANA-QAVAQAGAGDH  355 (412)
T ss_dssp             TTCCCCCTTEEEESCC---CHHHHGGGCSEEEESC-----CHHHHHHHHHHTCCEEECCCSTTHHHHH-HHHHHHTSEEE
T ss_pred             hhhccCCCcEEEeCCC---CHHHHHhcCcEEEECC-----chHHHHHHHHhCCCEEecCCchhHHHHH-HHHHHcCCEEe
Confidence            5555667899999999   4889999999999654     2479999999999999987654    33 56777889999


Q ss_pred             ECC---CHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 039338          431 FAP---NVESLHKTLEAAVSEGPMRLAQRGEACRQYAASMFTANKMALAYERLFLC  483 (493)
Q Consensus       431 ~~~---d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~  483 (493)
                      +++   |+++|+++|.++++| ++.+++|++.+++.... ++++++++.+++++.+
T Consensus       356 ~~~~~~~~~~l~~ai~~ll~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~  409 (412)
T 3otg_A          356 LLPDNISPDSVSGAAKRLLAE-ESYRAGARAVAAEIAAM-PGPDEVVRLLPGFASR  409 (412)
T ss_dssp             CCGGGCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHS-CCHHHHHTTHHHHHC-
T ss_pred             cCcccCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHhcC-CCHHHHHHHHHHHhcc
Confidence            986   789999999999999 89999999999888776 7999999999988754

>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}

Probab=99.91  E-value=7.7e-24  Score=207.77  Aligned_cols=350  Identities=14%  Similarity=0.084  Sum_probs=218.8

Q ss_pred             CCCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhC--CCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeec--
Q 039338           80 SKFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARR--GHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHE--  155 (493)
Q Consensus        80 ~~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~--G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  155 (493)
                      .|++|||++|+..      ..+... +..+.++|.++  |+++.++.+....  +-..+..+.   ... .+......  
T Consensus        24 ~m~~~kI~~v~Gt------r~~~~~-~a~li~~l~~~~~~~~~~~~~tG~h~--~m~~~~~~~---~~i-~~~~~l~v~~   90 (403)
T 3ot5_A           24 AMAKIKVMSIFGT------RPEAIK-MAPLVLALEKEPETFESTVVITAQHR--EMLDQVLEI---FDI-KPDIDLDIMK   90 (403)
T ss_dssp             --CCEEEEEEECS------HHHHHH-HHHHHHHHHTCTTTEEEEEEECC-------CHHHHHH---TTC-CCSEECCCCC
T ss_pred             ccccceEEEEEec------ChhHHH-HHHHHHHHHhCCCCCcEEEEEecCcH--HHHHHHHHh---cCC-CCCcccccCC
Confidence            3556899999973      234443 58899999987  6898877665442  110111111   011 01111111  


Q ss_pred             CCCCc-cccccchHHHHHHhcCCCCcEEEeCccc---hh---HHhhhccCcEEEEeccchhhhhhhhhhhhhhcCCCCcc
Q 039338          156 GEADK-WRYSKGWEQFDEENQREPFDVVHSESVA---LP---HWLARNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPM  228 (493)
Q Consensus       156 ~~~~~-~~~~~~~~~~~~~~~~~~~DiI~~~~~~---~~---~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~  228 (493)
                      ..... .........+.+.+++.+||+|++++..   ++   +....++| ++....+.....    .+.        + 
T Consensus        91 ~~~~~~~~~~~~~~~l~~~l~~~kPD~Vi~~gd~~~~l~~~laA~~~~IP-v~h~~aglrs~~----~~~--------~-  156 (403)
T 3ot5_A           91 KGQTLAEITSRVMNGINEVIAAENPDIVLVHGDTTTSFAAGLATFYQQKM-LGHVEAGLRTWN----KYS--------P-  156 (403)
T ss_dssp             -CCCHHHHHHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHHTTCE-EEEESCCCCCSC----TTS--------S-
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHcCCCEEEEECCchhHHHHHHHHHHhCCC-EEEEECCccccc----ccc--------C-
Confidence            01011 1123455667777788899999998642   22   22234566 554333320000    000        0 


Q ss_pred             chHhHhHHHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCC-ccCCCccCCcccchhhhhhhCCC
Q 039338          229 SLAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNG-INENEYGVDLSLGQSFRSRIGIP  307 (493)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ng-vd~~~~~~~~~~~~~~r~~~~i~  307 (493)
                            .......+     ..-+.+|.+++.|+..++.+.+ .|++++++.+++|+ +|...+..........++++   
T Consensus       157 ------~p~~~~r~-----~~~~~a~~~~~~se~~~~~l~~-~Gi~~~~i~vvGn~~~D~~~~~~~~~~~~~~~~~l---  221 (403)
T 3ot5_A          157 ------FPEEMNRQ-----LTGVMADIHFSPTKQAKENLLA-EGKDPATIFVTGNTAIDALKTTVQKDYHHPILENL---  221 (403)
T ss_dssp             ------TTHHHHHH-----HHHHHCSEEEESSHHHHHHHHH-TTCCGGGEEECCCHHHHHHHHHSCTTCCCHHHHSC---
T ss_pred             ------CcHHHHHH-----HHHHhcCEEECCCHHHHHHHHH-cCCCcccEEEeCCchHHHHHhhhhhhcchHHHHhc---
Confidence                  00011111     1223478999999999999988 68988999999985 55433322222122444544   


Q ss_pred             CCCcEEEEEeccccc-ccChHHHHHHHHHHHhhCCCeEEEEE-eCCC-cHHHHhh-hc--CcEEEecCCCHHHHHHHHHH
Q 039338          308 KNASLVLGVAGRLVK-DKGHPLLHEAFSKLMVKYPDVYLIVA-GSGP-WEQRYKD-FG--HQVLVMGSMSPAELRAFYNA  381 (493)
Q Consensus       308 ~~~~~~i~~~Gr~~~-~Kg~~~ll~a~~~l~~~~~~~~l~i~-G~g~-~~~~~~~-l~--~~V~~~g~~~~~~~~~~~~~  381 (493)
                      .++++++++.||... .|+++.+++++..+.++++++++++. |.++ .++.+++ +.  ++|.+.|++++.++..+|+.
T Consensus       222 ~~~~~vlv~~~r~~~~~~~l~~ll~a~~~l~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~~~v~l~~~l~~~~~~~l~~~  301 (403)
T 3ot5_A          222 GDNRLILMTAHRRENLGEPMQGMFEAVREIVESREDTELVYPMHLNPAVREKAMAILGGHERIHLIEPLDAIDFHNFLRK  301 (403)
T ss_dssp             TTCEEEEECCCCHHHHTTHHHHHHHHHHHHHHHCTTEEEEEECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHH
T ss_pred             cCCCEEEEEeCcccccCcHHHHHHHHHHHHHHhCCCceEEEecCCCHHHHHHHHHHhCCCCCEEEeCCCCHHHHHHHHHh
Confidence            344577777777643 47789999999999988899999887 4443 2444444 22  78999999999999999999


Q ss_pred             cCEEEeCCCCCCCCChHHHHHHHcCCcEEec-CCCCCccceeeeCcceEEECCCHHHHHHHHHHHHHcCcHHHHHHHHHH
Q 039338          382 IDIFVNPTLRPQGLDLTLMEAMMSGKPVMAS-RFPSIKGTIVVDDEFGFMFAPNVESLHKTLEAAVSEGPMRLAQRGEAC  460 (493)
Q Consensus       382 adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s-~~~~~~~e~v~~~~~G~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~  460 (493)
                      ||++|.+|      |...+||+++|+|+|++ +.++.. |.+..+ +|++++.|++++++++.+++++ ++.+++|++++
T Consensus       302 ad~vv~~S------Gg~~~EA~a~g~PvV~~~~~~~~~-e~v~~g-~~~lv~~d~~~l~~ai~~ll~~-~~~~~~m~~~~  372 (403)
T 3ot5_A          302 SYLVFTDS------GGVQEEAPGMGVPVLVLRDTTERP-EGIEAG-TLKLIGTNKENLIKEALDLLDN-KESHDKMAQAA  372 (403)
T ss_dssp             EEEEEECC------HHHHHHGGGTTCCEEECCSSCSCH-HHHHHT-SEEECCSCHHHHHHHHHHHHHC-HHHHHHHHHSC
T ss_pred             cCEEEECC------ccHHHHHHHhCCCEEEecCCCcch-hheeCC-cEEEcCCCHHHHHHHHHHHHcC-HHHHHHHHhhc
Confidence            99999776      23448999999999998 566665 666544 8888877999999999999999 88888888765


Q ss_pred             HHHHHHhcCHHHHHHHHHHHH
Q 039338          461 RQYAASMFTANKMALAYERLF  481 (493)
Q Consensus       461 ~~~~~~~fs~~~~~~~~~~~~  481 (493)
                      ..+... .+.+++++.+.+.+
T Consensus       373 ~~~g~~-~aa~rI~~~l~~~l  392 (403)
T 3ot5_A          373 NPYGDG-FAANRILAAIKSHF  392 (403)
T ss_dssp             CTTCCS-CHHHHHHHHHHHHH
T ss_pred             CcccCC-cHHHHHHHHHHHHh
Confidence            544222 34555555554443

>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}

Probab=99.88  E-value=3.5e-21  Score=186.73  Aligned_cols=327  Identities=16%  Similarity=0.116  Sum_probs=204.5

Q ss_pred             ceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCC-----
Q 039338           83 TLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGE-----  157 (493)
Q Consensus        83 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  157 (493)
                      +.||++.+.      ..||.-.-+..++++|.++||+|++++....-  +.  +..      ...+..++.+...     
T Consensus         2 ~~~i~i~~G------GTgGHi~palala~~L~~~g~~V~~vg~~~g~--e~--~~v------~~~g~~~~~i~~~~~~~~   65 (365)
T 3s2u_A            2 KGNVLIMAG------GTGGHVFPALACAREFQARGYAVHWLGTPRGI--EN--DLV------PKAGLPLHLIQVSGLRGK   65 (365)
T ss_dssp             -CEEEEECC------SSHHHHHHHHHHHHHHHHTTCEEEEEECSSST--HH--HHT------GGGTCCEEECC-------
T ss_pred             CCcEEEEcC------CCHHHHHHHHHHHHHHHhCCCEEEEEECCchH--hh--chh------hhcCCcEEEEECCCcCCC
Confidence            347887763      55787777899999999999999999865432  10  000      0011111111110     


Q ss_pred             ------CCccccccchHHHHHHhcCCCCcEEEeCccc--hhH---HhhhccCcEEEEeccchhhhhhhhhhhhhhcCCCC
Q 039338          158 ------ADKWRYSKGWEQFDEENQREPFDVVHSESVA--LPH---WLARNVTNLAVSWHGIALESLQSGIFQDLTRKPLE  226 (493)
Q Consensus       158 ------~~~~~~~~~~~~~~~~~~~~~~DiI~~~~~~--~~~---~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~  226 (493)
                            ...+..........+++++.+||+|+.++..  .+.   ....++| +++.-.+...               + 
T Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~l~~~~PDvVi~~g~~~s~p~~laA~~~~iP-~vihe~n~~~---------------G-  128 (365)
T 3s2u_A           66 GLKSLVKAPLELLKSLFQALRVIRQLRPVCVLGLGGYVTGPGGLAARLNGVP-LVIHEQNAVA---------------G-  128 (365)
T ss_dssp             -------CHHHHHHHHHHHHHHHHHHCCSEEEECSSSTHHHHHHHHHHTTCC-EEEEECSSSC---------------C-
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEcCCcchHHHHHHHHHcCCC-EEEEecchhh---------------h-
Confidence                  0111222333455566778899999987542  222   2334567 5543222110               0 


Q ss_pred             ccchHhHhHHHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCC
Q 039338          227 PMSLAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGI  306 (493)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i  306 (493)
                              .    ..+     .+.+.++.+....+..       + ...+++.++.|++..+.+...       +...++
T Consensus       129 --------~----~nr-----~l~~~a~~v~~~~~~~-------~-~~~~k~~~~g~pvr~~~~~~~-------~~~~~~  176 (365)
T 3s2u_A          129 --------T----ANR-----SLAPIARRVCEAFPDT-------F-PASDKRLTTGNPVRGELFLDA-------HARAPL  176 (365)
T ss_dssp             --------H----HHH-----HHGGGCSEEEESSTTS-------S-CC---CEECCCCCCGGGCCCT-------TSSCCC
T ss_pred             --------h----HHH-----hhccccceeeeccccc-------c-cCcCcEEEECCCCchhhccch-------hhhccc
Confidence                    0    011     2234567776654432       2 134577788888876654322       233455


Q ss_pred             CCCCcEEEEEecccccccChHHHHHHHHHHHhhCCCeEE-EEEeCCCcH---HHHhhhcCcEEEecCCCHHHHHHHHHHc
Q 039338          307 PKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYL-IVAGSGPWE---QRYKDFGHQVLVMGSMSPAELRAFYNAI  382 (493)
Q Consensus       307 ~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l-~i~G~g~~~---~~~~~l~~~V~~~g~~~~~~~~~~~~~a  382 (493)
                      +++++.++++.|+....+..+.+.+++..+..+. ++++ +++|.+...   +.++++..++.+.+++  +++.++|++|
T Consensus       177 ~~~~~~ilv~gGs~g~~~~~~~~~~al~~l~~~~-~~~vi~~~G~~~~~~~~~~~~~~~~~~~v~~f~--~dm~~~l~~a  253 (365)
T 3s2u_A          177 TGRRVNLLVLGGSLGAEPLNKLLPEALAQVPLEI-RPAIRHQAGRQHAEITAERYRTVAVEADVAPFI--SDMAAAYAWA  253 (365)
T ss_dssp             TTSCCEEEECCTTTTCSHHHHHHHHHHHTSCTTT-CCEEEEECCTTTHHHHHHHHHHTTCCCEEESCC--SCHHHHHHHC
T ss_pred             CCCCcEEEEECCcCCccccchhhHHHHHhccccc-ceEEEEecCccccccccceecccccccccccch--hhhhhhhccc
Confidence            6667677778888888888888899998886553 3444 445654332   2344455789999999  6899999999


Q ss_pred             CEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCcc-------ceeeeCcceEEECC---CHHHHHHHHHHHHHcCcHH
Q 039338          383 DIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKG-------TIVVDDEFGFMFAP---NVESLHKTLEAAVSEGPMR  452 (493)
Q Consensus       383 dv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~-------e~v~~~~~G~~~~~---d~~~l~~~i~~ll~~~~~~  452 (493)
                      |++|.-    .| ++|+.|+|++|+|+|..+.+...+       +.+.+.+.|++++.   ++++|+++|.++++| ++.
T Consensus       254 DlvI~r----aG-~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l~~~G~a~~l~~~~~~~~~L~~~i~~ll~d-~~~  327 (365)
T 3s2u_A          254 DLVICR----AG-ALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLVRSGAGRLLPQKSTGAAELAAQLSEVLMH-PET  327 (365)
T ss_dssp             SEEEEC----CC-HHHHHHHHHHTCCEEECC-----CCHHHHHHHHHHTTTSEEECCTTTCCHHHHHHHHHHHHHC-THH
T ss_pred             eEEEec----CC-cchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHHHHCCCEEEeecCCCCHHHHHHHHHHHHCC-HHH
Confidence            999952    23 689999999999999887654321       24566678998875   689999999999999 999


Q ss_pred             HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Q 039338          453 LAQRGEACRQYAASMFTANKMALAYERLFLCI  484 (493)
Q Consensus       453 ~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~i  484 (493)
                      +++|++++++.... ...+++++.++++.+.+
T Consensus       328 ~~~m~~~a~~~~~~-~aa~~ia~~i~~larG~  358 (365)
T 3s2u_A          328 LRSMADQARSLAKP-EATRTVVDACLEVARGL  358 (365)
T ss_dssp             HHHHHHHHHHTCCT-THHHHHHHHHHHHC---
T ss_pred             HHHHHHHHHhcCCc-cHHHHHHHHHHHHHccc
Confidence            99999999987655 36677777777665544

>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}

Probab=99.87  E-value=5.9e-21  Score=190.21  Aligned_cols=353  Identities=14%  Similarity=0.091  Sum_probs=207.2

Q ss_pred             CceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCC----
Q 039338           82 FTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGE----  157 (493)
Q Consensus        82 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  157 (493)
                      ..|||++++.      ..+|....+..|+++|.++||+|++++.....  .. ...        .+...+.+....    
T Consensus         6 ~m~kIl~~~~------~~~Gh~~p~~~la~~L~~~G~~V~~~~~~~~~--~~-~~~--------~g~~~~~~~~~~~~~~   68 (430)
T 2iyf_A            6 TPAHIAMFSI------AAHGHVNPSLEVIRELVARGHRVTYAIPPVFA--DK-VAA--------TGPRPVLYHSTLPGPD   68 (430)
T ss_dssp             --CEEEEECC------SCHHHHGGGHHHHHHHHHTTCEEEEEECGGGH--HH-HHT--------TSCEEEECCCCSCCTT
T ss_pred             ccceEEEEeC------CCCccccchHHHHHHHHHCCCeEEEEeCHHHH--HH-HHh--------CCCEEEEcCCcCcccc
Confidence            3479999863      34677778899999999999999999876431  00 000        000001000000    


Q ss_pred             -------CCccc--------cccchHHHHHHhcCCCCcEEEeCccchhH---HhhhccCcEEEEeccchhhh-hh----h
Q 039338          158 -------ADKWR--------YSKGWEQFDEENQREPFDVVHSESVALPH---WLARNVTNLAVSWHGIALES-LQ----S  214 (493)
Q Consensus       158 -------~~~~~--------~~~~~~~~~~~~~~~~~DiI~~~~~~~~~---~~~~~~p~~v~~~h~~~~~~-~~----~  214 (493)
                             .....        .......+.+.+++.+||+|+++......   ....++| .+...+...... +.    .
T Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~d~~~~~~~~~A~~~giP-~v~~~~~~~~~~~~~~~~~~  147 (430)
T 2iyf_A           69 ADPEAWGSTLLDNVEPFLNDAIQALPQLADAYADDIPDLVLHDITSYPARVLARRWGVP-AVSLSPNLVAWKGYEEEVAE  147 (430)
T ss_dssp             SCGGGGCSSHHHHHHHHHHHHHHHHHHHHHHHTTSCCSEEEEETTCHHHHHHHHHHTCC-EEEEESSCCCCTTHHHHTHH
T ss_pred             ccccccchhhHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEECCccHHHHHHHHHcCCC-EEEEeccccccccccccccc
Confidence                   00000        01223445666678899999987543222   2234678 676665542110 00    0


Q ss_pred             hhhhhhhcCCCCccchHhHhHHHHHHHHHHHH-------HHhhccCCeEEEcChhHHHHHHHHhCCCCCc-EEEecCCcc
Q 039338          215 GIFQDLTRKPLEPMSLAFNKSLQGVMLKVLNE-------IRFFNKYAHHVAISDSCGEMLRDVYQIPSER-VHVILNGIN  286 (493)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~-v~vi~ngvd  286 (493)
                      ..+......      ... ..+...+.+.+..       ..++..++.+++.+....+...+.  ++ .+ +..+.++++
T Consensus       148 ~~~~~~~~~------~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~-~~~v~~vG~~~~  217 (430)
T 2iyf_A          148 PMWREPRQT------ERG-RAYYARFEAWLKENGITEHPDTFASHPPRSLVLIPKALQPHADR--VD-EDVYTFVGACQG  217 (430)
T ss_dssp             HHHHHHHHS------HHH-HHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEECSCGGGSTTGGG--SC-TTTEEECCCCC-
T ss_pred             chhhhhccc------hHH-HHHHHHHHHHHHHhCCCCCHHHHhcCCCcEEEeCcHHhCCCccc--CC-CccEEEeCCcCC
Confidence            000000000      000 0111112222111       012335788888877654433221  22 34 777776554


Q ss_pred             CCCccCCcccchhhhhhhCC-CCCCcEEEEEecccccccChHHHHHHHHHHHhhCCCeEE-EEEeCCCcHHHHhhhcCcE
Q 039338          287 ENEYGVDLSLGQSFRSRIGI-PKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYL-IVAGSGPWEQRYKDFGHQV  364 (493)
Q Consensus       287 ~~~~~~~~~~~~~~r~~~~i-~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l-~i~G~g~~~~~~~~l~~~V  364 (493)
                      ......          .+.. .++++++++++|++. .++.+.+.+++..+.+. +++++ +++|+++..+.++++.++|
T Consensus       218 ~~~~~~----------~~~~~~~~~~~v~v~~Gs~~-~~~~~~~~~~~~~l~~~-~~~~~~~~~G~~~~~~~l~~~~~~v  285 (430)
T 2iyf_A          218 DRAEEG----------GWQRPAGAEKVVLVSLGSAF-TKQPAFYRECVRAFGNL-PGWHLVLQIGRKVTPAELGELPDNV  285 (430)
T ss_dssp             ----CC----------CCCCCTTCSEEEEEECTTTC-C-CHHHHHHHHHHHTTC-TTEEEEEECC---CGGGGCSCCTTE
T ss_pred             CCCCCC----------CCccccCCCCeEEEEcCCCC-CCcHHHHHHHHHHHhcC-CCeEEEEEeCCCCChHHhccCCCCe
Confidence            321000          0111 234457888999998 55555555555555432 46787 5688876655555566899


Q ss_pred             EEecCCCHHHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCC----CccceeeeCcceEEECC---CHHH
Q 039338          365 LVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPS----IKGTIVVDDEFGFMFAP---NVES  437 (493)
Q Consensus       365 ~~~g~~~~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~----~~~e~v~~~~~G~~~~~---d~~~  437 (493)
                      .+.|++++.   ++|+.||++|..+    | +++++|||++|+|+|+.+.++    .. +.+.+.+.|+.++.   |+++
T Consensus       286 ~~~~~~~~~---~~l~~ad~~v~~~----G-~~t~~Ea~~~G~P~i~~p~~~~q~~~a-~~~~~~g~g~~~~~~~~~~~~  356 (430)
T 2iyf_A          286 EVHDWVPQL---AILRQADLFVTHA----G-AGGSQEGLATATPMIAVPQAVDQFGNA-DMLQGLGVARKLATEEATADL  356 (430)
T ss_dssp             EEESSCCHH---HHHTTCSEEEECC----C-HHHHHHHHHTTCCEEECCCSHHHHHHH-HHHHHTTSEEECCCC-CCHHH
T ss_pred             EEEecCCHH---HHhhccCEEEECC----C-ccHHHHHHHhCCCEEECCCccchHHHH-HHHHHcCCEEEcCCCCCCHHH
Confidence            999999754   7899999999743    2 379999999999999998754    23 45667788999875   7899


Q ss_pred             HHHHHHHHHHcCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHh
Q 039338          438 LHKTLEAAVSEGPMRLAQRGEACRQYAASMFTANKMALAYERLFLCIK  485 (493)
Q Consensus       438 l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~i~  485 (493)
                      ++++|.++++| ++.++++++.+++.... ++++++++.+++++++..
T Consensus       357 l~~~i~~ll~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~  402 (430)
T 2iyf_A          357 LRETALALVDD-PEVARRLRRIQAEMAQE-GGTRRAADLIEAELPARH  402 (430)
T ss_dssp             HHHHHHHHHHC-HHHHHHHHHHHHHHHHH-CHHHHHHHHHHTTSCC--
T ss_pred             HHHHHHHHHcC-HHHHHHHHHHHHHHHhc-CcHHHHHHHHHHHhhccc
Confidence            99999999998 88889999988887765 799999999988876543

>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*

Probab=99.86  E-value=5.9e-22  Score=195.37  Aligned_cols=156  Identities=18%  Similarity=0.156  Sum_probs=107.5

Q ss_pred             CCCcEEEEEeccccccc----------ChHHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhhhcCcEEEecCCCHHHHHH
Q 039338          308 KNASLVLGVAGRLVKDK----------GHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDFGHQVLVMGSMSPAELRA  377 (493)
Q Consensus       308 ~~~~~~i~~~Gr~~~~K----------g~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~l~~~V~~~g~~~~~~~~~  377 (493)
                      .+++.+++++|++...|          .+..+++++..+     +++++++|++...+.+.++.++|.+.|+++   +.+
T Consensus       225 ~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~-----~~~~v~~~~~~~~~~l~~~~~~v~~~~~~~---~~~  296 (398)
T 4fzr_A          225 RKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKL-----GFEVVVAVSDKLAQTLQPLPEGVLAAGQFP---LSA  296 (398)
T ss_dssp             CSSCEEECC----------------CCSHHHHHHHGGGG-----TCEEEECCCC--------CCTTEEEESCCC---HHH
T ss_pred             CCCCEEEEEccCcccccccccccchHHHHHHHHHHHHhC-----CCEEEEEeCCcchhhhccCCCcEEEeCcCC---HHH
Confidence            34557888899997554          355555555443     678888887776666667779999999985   567


Q ss_pred             HHHHcCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCC----CCccceeeeCcceEEECC---CHHHHHHHHHHHHHcCc
Q 039338          378 FYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFP----SIKGTIVVDDEFGFMFAP---NVESLHKTLEAAVSEGP  450 (493)
Q Consensus       378 ~~~~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~----~~~~e~v~~~~~G~~~~~---d~~~l~~~i~~ll~~~~  450 (493)
                      +++.||++|.     .|.+.+++|||++|+|+|+....    +.. +.+.+.+.|++++.   ++++|+++|.++++| +
T Consensus       297 ll~~ad~~v~-----~gG~~t~~Ea~~~G~P~v~~p~~~~q~~~a-~~~~~~g~g~~~~~~~~~~~~l~~ai~~ll~~-~  369 (398)
T 4fzr_A          297 IMPACDVVVH-----HGGHGTTLTCLSEGVPQVSVPVIAEVWDSA-RLLHAAGAGVEVPWEQAGVESVLAACARIRDD-S  369 (398)
T ss_dssp             HGGGCSEEEE-----CCCHHHHHHHHHTTCCEEECCCSGGGHHHH-HHHHHTTSEEECC-------CHHHHHHHHHHC-T
T ss_pred             HHhhCCEEEe-----cCCHHHHHHHHHhCCCEEecCCchhHHHHH-HHHHHcCCEEecCcccCCHHHHHHHHHHHHhC-H
Confidence            8889999995     33367999999999999997553    333 56778889999875   688999999999999 8


Q ss_pred             HHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Q 039338          451 MRLAQRGEACRQYAASMFTANKMALAYER  479 (493)
Q Consensus       451 ~~~~~~~~~~~~~~~~~fs~~~~~~~~~~  479 (493)
                      +.++++++.+++.... .+++++++.+++
T Consensus       370 ~~~~~~~~~~~~~~~~-~~~~~~~~~l~~  397 (398)
T 4fzr_A          370 SYVGNARRLAAEMATL-PTPADIVRLIEQ  397 (398)
T ss_dssp             HHHHHHHHHHHHHTTS-CCHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHHcC-CCHHHHHHHHhc
Confidence            9999998888877655 799998887753

>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*

Probab=99.85  E-value=1.2e-20  Score=185.59  Aligned_cols=163  Identities=14%  Similarity=0.103  Sum_probs=126.8

Q ss_pred             CCCcEEEEEecccccccCh-HHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhhhcCcEEEecCCCHHHHHHHHHHcCEEE
Q 039338          308 KNASLVLGVAGRLVKDKGH-PLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDFGHQVLVMGSMSPAELRAFYNAIDIFV  386 (493)
Q Consensus       308 ~~~~~~i~~~Gr~~~~Kg~-~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~l~~~V~~~g~~~~~~~~~~~~~adv~v  386 (493)
                      .+++.++++.|+....|+. ..+++++.+. .+.|+++++++|++...+.+..+.++|.+.|+++..+   +++.||++|
T Consensus       216 ~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~p~~~~v~~~~~~~~~~l~~~~~~v~~~~~~~~~~---ll~~ad~~v  291 (391)
T 3tsa_A          216 TSARRVCICMGRMVLNATGPAPLLRAVAAA-TELPGVEAVIAVPPEHRALLTDLPDNARIAESVPLNL---FLRTCELVI  291 (391)
T ss_dssp             CSSEEEEEECCHHHHHHHCSHHHHHHHHHH-HTSTTEEEEEECCGGGGGGCTTCCTTEEECCSCCGGG---TGGGCSEEE
T ss_pred             CCCCEEEEEcCCCCCcccchHHHHHHHHHh-ccCCCeEEEEEECCcchhhcccCCCCEEEeccCCHHH---HHhhCCEEE
Confidence            4555788888998765544 6777777777 7767999999988766555556678999999997654   559999999


Q ss_pred             eCCCCCCCCChHHHHHHHcCCcEEecCCCC----CccceeeeCcceEEECC-----CHHHHHHHHHHHHHcCcHHHHHHH
Q 039338          387 NPTLRPQGLDLTLMEAMMSGKPVMASRFPS----IKGTIVVDDEFGFMFAP-----NVESLHKTLEAAVSEGPMRLAQRG  457 (493)
Q Consensus       387 ~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~----~~~e~v~~~~~G~~~~~-----d~~~l~~~i~~ll~~~~~~~~~~~  457 (493)
                      .     .|.+.+++|||++|+|+|+....+    .. +.+.+.+.|..+++     +++++++++.++++| ++.+++++
T Consensus       292 ~-----~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a-~~~~~~g~g~~~~~~~~~~~~~~l~~ai~~ll~~-~~~~~~~~  364 (391)
T 3tsa_A          292 C-----AGGSGTAFTATRLGIPQLVLPQYFDQFDYA-RNLAAAGAGICLPDEQAQSDHEQFTDSIATVLGD-TGFAAAAI  364 (391)
T ss_dssp             E-----CCCHHHHHHHHHTTCCEEECCCSTTHHHHH-HHHHHTTSEEECCSHHHHTCHHHHHHHHHHHHTC-THHHHHHH
T ss_pred             e-----CCCHHHHHHHHHhCCCEEecCCcccHHHHH-HHHHHcCCEEecCcccccCCHHHHHHHHHHHHcC-HHHHHHHH
Confidence            5     333569999999999999975532    22 45677889999874     799999999999999 88889998


Q ss_pred             HHHHHHHHHhcCHHHHHHHHHHHHH
Q 039338          458 EACRQYAASMFTANKMALAYERLFL  482 (493)
Q Consensus       458 ~~~~~~~~~~fs~~~~~~~~~~~~~  482 (493)
                      +.+++.... .+++++++.++++..
T Consensus       365 ~~~~~~~~~-~~~~~~~~~i~~~~~  388 (391)
T 3tsa_A          365 KLSDEITAM-PHPAALVRTLENTAA  388 (391)
T ss_dssp             HHHHHHHTS-CCHHHHHHHHHHC--
T ss_pred             HHHHHHHcC-CCHHHHHHHHHHHHh
Confidence            888777655 799999888877654

>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}

Probab=99.81  E-value=7.3e-19  Score=173.40  Aligned_cols=350  Identities=13%  Similarity=0.103  Sum_probs=200.3

Q ss_pred             eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecC-------
Q 039338           84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEG-------  156 (493)
Q Consensus        84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------  156 (493)
                      |||++++.      ...|.-..+..|+++|+++||+|++++.....  .. .+.        .+ ..+.....       
T Consensus         5 ~~il~~~~------~~~Ghv~~~~~La~~L~~~GheV~v~~~~~~~--~~-~~~--------~G-~~~~~~~~~~~~~~~   66 (402)
T 3ia7_A            5 RHILFANV------QGHGHVYPSLGLVSELARRGHRITYVTTPLFA--DE-VKA--------AG-AEVVLYKSEFDTFHV   66 (402)
T ss_dssp             CEEEEECC------SSHHHHHHHHHHHHHHHHTTCEEEEEECHHHH--HH-HHH--------TT-CEEEECCCGGGTSSS
T ss_pred             CEEEEEeC------CCCcccccHHHHHHHHHhCCCEEEEEcCHHHH--HH-HHH--------cC-CEEEecccccccccc
Confidence            39999985      34677888999999999999999999964311  00 000        00 00000000       


Q ss_pred             -----CCCccc-----c----ccchHHHHHHhcCCCCcEEEeC-ccchhH---HhhhccCcEEEEeccchhhhhhhh---
Q 039338          157 -----EADKWR-----Y----SKGWEQFDEENQREPFDVVHSE-SVALPH---WLARNVTNLAVSWHGIALESLQSG---  215 (493)
Q Consensus       157 -----~~~~~~-----~----~~~~~~~~~~~~~~~~DiI~~~-~~~~~~---~~~~~~p~~v~~~h~~~~~~~~~~---  215 (493)
                           ......     .    ......+.+.+++.+||+||++ ......   ....++| ++...++.+.......   
T Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~d~~~~~~~~~aA~~~giP-~v~~~~~~~~~~~~~~~~~  145 (402)
T 3ia7_A           67 PEVVKQEDAETQLHLVYVRENVAILRAAEEALGDNPPDLVVYDVFPFIAGRLLAARWDRP-AVRLTGGFAANEHYSLFKE  145 (402)
T ss_dssp             SSSSCCTTHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSEEEEESTTHHHHHHHHHHHTCC-EEEEESSCCCBTTBCHHHH
T ss_pred             cccccccchHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEECchHHHHHHHHHHhhCCC-EEEEecccccCcccccccc
Confidence                 000000     0    0113455666778899999997 332222   2335678 7777766543211111   


Q ss_pred             hhhhhhcCCCCccchHhHhHHHHHHHHHHHH-------HHhhccC-CeEEEcChhHHHHHHHHhCCCCCcEEEecCCccC
Q 039338          216 IFQDLTRKPLEPMSLAFNKSLQGVMLKVLNE-------IRFFNKY-AHHVAISDSCGEMLRDVYQIPSERVHVILNGINE  287 (493)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~-d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~  287 (493)
                      ..... . ...+.   ....+...+.+....       ..+.... +..++......+.....+   ..++..+.+.++.
T Consensus       146 ~~~~~-~-~~~~~---~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~---~~~~~~vGp~~~~  217 (402)
T 3ia7_A          146 LWKSN-G-QRHPA---DVEAVHSVLVDLLGKYGVDTPVKEYWDEIEGLTIVFLPKSFQPFAETF---DERFAFVGPTLTG  217 (402)
T ss_dssp             HHHHH-T-CCCGG---GSHHHHHHHHHHHHTTTCCSCHHHHHTCCCSCEEESSCGGGSTTGGGC---CTTEEECCCCCCC
T ss_pred             ccccc-c-ccChh---hHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcChHhCCccccC---CCCeEEeCCCCCC
Confidence            00000 0 00000   001111111111110       0112222 556666655444333222   2345555443321


Q ss_pred             CCccCCcccchhhhhhhCCCCCCcEEEEEecccccccChHHHHHHHHHHHhhCCCeEEEE-EeCCCcHHHHhhhcCcEEE
Q 039338          288 NEYGVDLSLGQSFRSRIGIPKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIV-AGSGPWEQRYKDFGHQVLV  366 (493)
Q Consensus       288 ~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i-~G~g~~~~~~~~l~~~V~~  366 (493)
                      ......         ......+++.++++.|+....+ .+.+.+++..+.+.  ++++++ +|++...+.++++.++|.+
T Consensus       218 ~~~~~~---------~~~~~~~~~~v~v~~G~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~v~~  285 (402)
T 3ia7_A          218 RDGQPG---------WQPPRPDAPVLLVSLGNQFNEH-PEFFRACAQAFADT--PWHVVMAIGGFLDPAVLGPLPPNVEA  285 (402)
T ss_dssp             ----CC---------CCCSSTTCCEEEEECCSCSSCC-HHHHHHHHHHHTTS--SCEEEEECCTTSCGGGGCSCCTTEEE
T ss_pred             cccCCC---------CcccCCCCCEEEEECCCCCcch-HHHHHHHHHHHhcC--CcEEEEEeCCcCChhhhCCCCCcEEE
Confidence            110000         0001234557888999987554 23333333334322  355555 6766566666667789999


Q ss_pred             ecCCCHHHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcCCcEEecCC-C----CCccceeeeCcceEEECC---CHHHH
Q 039338          367 MGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRF-P----SIKGTIVVDDEFGFMFAP---NVESL  438 (493)
Q Consensus       367 ~g~~~~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~-~----~~~~e~v~~~~~G~~~~~---d~~~l  438 (493)
                      .|++++.   ++++.||++|..+    | ..+++|||++|+|+|+... .    +.. +.+.+.+.|..++.   +++++
T Consensus       286 ~~~~~~~---~ll~~ad~~v~~~----G-~~t~~Ea~~~G~P~v~~p~~~~~q~~~a-~~~~~~g~g~~~~~~~~~~~~l  356 (402)
T 3ia7_A          286 HQWIPFH---SVLAHARACLTHG----T-TGAVLEAFAAGVPLVLVPHFATEAAPSA-ERVIELGLGSVLRPDQLEPASI  356 (402)
T ss_dssp             ESCCCHH---HHHTTEEEEEECC----C-HHHHHHHHHTTCCEEECGGGCGGGHHHH-HHHHHTTSEEECCGGGCSHHHH
T ss_pred             ecCCCHH---HHHhhCCEEEECC----C-HHHHHHHHHhCCCEEEeCCCcccHHHHH-HHHHHcCCEEEccCCCCCHHHH
Confidence            9999754   8999999999644    2 3689999999999997654 2    233 45677889999875   78999


Q ss_pred             HHHHHHHHHcCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 039338          439 HKTLEAAVSEGPMRLAQRGEACRQYAASMFTANKMALAYERLFLC  483 (493)
Q Consensus       439 ~~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~  483 (493)
                      ++++.++++| ++.++++++.+++.... .++++.++.+++++.+
T Consensus       357 ~~~~~~ll~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~  399 (402)
T 3ia7_A          357 REAVERLAAD-SAVRERVRRMQRDILSS-GGPARAADEVEAYLGR  399 (402)
T ss_dssp             HHHHHHHHHC-HHHHHHHHHHHHHHHTS-CHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHcC-HHHHHHHHHHHHHHhhC-ChHHHHHHHHHHHHhh
Confidence            9999999999 88888888877766544 7889999998888764

>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*

Probab=99.80  E-value=1.2e-18  Score=171.72  Aligned_cols=158  Identities=13%  Similarity=0.061  Sum_probs=117.6

Q ss_pred             CCCcEEEEEecccccc-cChHHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhhhcCcEEEecCCCHHHHHHHHHHcCEEE
Q 039338          308 KNASLVLGVAGRLVKD-KGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDFGHQVLVMGSMSPAELRAFYNAIDIFV  386 (493)
Q Consensus       308 ~~~~~~i~~~Gr~~~~-Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~l~~~V~~~g~~~~~~~~~~~~~adv~v  386 (493)
                      .+++.+++++|++... ++.+.+.+++..+.+.  +++++++|++...+.+.++.++|.+.|+++   +.++++.||++|
T Consensus       230 ~~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~--~~~~v~~~g~~~~~~l~~~~~~v~~~~~~~---~~~ll~~ad~~v  304 (398)
T 3oti_A          230 PARPEVAITMGTIELQAFGIGAVEPIIAAAGEV--DADFVLALGDLDISPLGTLPRNVRAVGWTP---LHTLLRTCTAVV  304 (398)
T ss_dssp             CSSCEEEECCTTTHHHHHCGGGHHHHHHHHHTS--SSEEEEECTTSCCGGGCSCCTTEEEESSCC---HHHHHTTCSEEE
T ss_pred             CCCCEEEEEcCCCccccCcHHHHHHHHHHHHcC--CCEEEEEECCcChhhhccCCCcEEEEccCC---HHHHHhhCCEEE
Confidence            4555888899999654 4666666666666543  688999888776666666778999999995   557788899999


Q ss_pred             eCCCCCCCCChHHHHHHHcCCcEEecCC----CCCcc-ceeeeCcceEEECC---CHHHHHHHHHHHHHcCcHHHHHHHH
Q 039338          387 NPTLRPQGLDLTLMEAMMSGKPVMASRF----PSIKG-TIVVDDEFGFMFAP---NVESLHKTLEAAVSEGPMRLAQRGE  458 (493)
Q Consensus       387 ~ps~~~eg~~~~~~EAm~~G~PvI~s~~----~~~~~-e~v~~~~~G~~~~~---d~~~l~~~i~~ll~~~~~~~~~~~~  458 (493)
                      ..     |.+.+++|||++|+|+|+...    .+... +.+.+.+.|+.++.   +++.+.    ++++| ++.++++++
T Consensus       305 ~~-----~G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~~~~~~~g~g~~~~~~~~~~~~l~----~ll~~-~~~~~~~~~  374 (398)
T 3oti_A          305 HH-----GGGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAVSRRGIGLVSTSDKVDADLLR----RLIGD-ESLRTAARE  374 (398)
T ss_dssp             EC-----CCHHHHHHHHHHTCCEEECCCTTCCSSCTTHHHHHHHTSEEECCGGGCCHHHHH----HHHHC-HHHHHHHHH
T ss_pred             EC-----CCHHHHHHHHHhCCCEEEcCCCchhHHHHHHHHHHHCCCEEeeCCCCCCHHHHH----HHHcC-HHHHHHHHH
Confidence            53     345699999999999999543    33320 34566788999875   445554    88888 899999988


Q ss_pred             HHHHHHHHhcCHHHHHHHHHHHH
Q 039338          459 ACRQYAASMFTANKMALAYERLF  481 (493)
Q Consensus       459 ~~~~~~~~~fs~~~~~~~~~~~~  481 (493)
                      .+++.... .+++.+++.++++.
T Consensus       375 ~~~~~~~~-~~~~~~~~~l~~l~  396 (398)
T 3oti_A          375 VREEMVAL-PTPAETVRRIVERI  396 (398)
T ss_dssp             HHHHHHTS-CCHHHHHHHHHHHH
T ss_pred             HHHHHHhC-CCHHHHHHHHHHHh
Confidence            88776655 79999999888765

>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}

Probab=99.80  E-value=8.1e-20  Score=177.50  Aligned_cols=350  Identities=11%  Similarity=0.047  Sum_probs=219.0

Q ss_pred             ceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCC-Ccc
Q 039338           83 TLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEA-DKW  161 (493)
Q Consensus        83 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  161 (493)
                      -+|+++|+..=|      . -.-+..+.++|.+. +++.++.+....  +....... .+.+....+.+....... ...
T Consensus         9 ~~~~~~v~GtRp------e-~~k~~p~~~~l~~~-~~~~~~~tgqh~--~~~~~~~~-~~~~~i~~~~~~l~~~~~~~~~   77 (385)
T 4hwg_A            9 MLKVMTIVGTRP------E-LIKLCCVISEFDKH-TKHILVHTGQNY--AYELNQVF-FDDMGIRKPDYFLEVAADNTAK   77 (385)
T ss_dssp             CCEEEEEECSHH------H-HHHHHHHHHHHHHH-SEEEEEECSCHH--HHHHTHHH-HC-CCCCCCSEECCCCCCCSHH
T ss_pred             hhheeEEEEcCH------h-HHHHHHHHHHHHhc-CCEEEEEeCCCC--ChhHHHHH-HhhCCCCCCceecCCCCCCHHH
Confidence            368999986322      1 12367788888887 998888776543  11111100 000111112222111111 111


Q ss_pred             ccccchHHHHHHhcCCCCcEEEeCcc---chh--HHhhhccCcEEEEeccchhhhhhhhhhhhhhcCCCCccchHhHhHH
Q 039338          162 RYSKGWEQFDEENQREPFDVVHSESV---ALP--HWLARNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSL  236 (493)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~DiI~~~~~---~~~--~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (493)
                      ........+.+.+++.+||+|++++.   .++  +....++| ++....+....              .        ..+
T Consensus        78 ~~~~~~~~l~~~l~~~kPD~Vlv~gd~~~~~aalaA~~~~IP-v~h~eaglrs~--------------~--------~~~  134 (385)
T 4hwg_A           78 SIGLVIEKVDEVLEKEKPDAVLFYGDTNSCLSAIAAKRRKIP-IFHMEAGNRCF--------------D--------QRV  134 (385)
T ss_dssp             HHHHHHHHHHHHHHHHCCSEEEEESCSGGGGGHHHHHHTTCC-EEEESCCCCCS--------------C--------TTS
T ss_pred             HHHHHHHHHHHHHHhcCCcEEEEECCchHHHHHHHHHHhCCC-EEEEeCCCccc--------------c--------ccC
Confidence            22345566777778889999999763   222  22334667 65544442110              0        000


Q ss_pred             HHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCc-cCCCccCCcccchhhhhhhCCCCCCcEEEE
Q 039338          237 QGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGI-NENEYGVDLSLGQSFRSRIGIPKNASLVLG  315 (493)
Q Consensus       237 ~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngv-d~~~~~~~~~~~~~~r~~~~i~~~~~~~i~  315 (493)
                      .....|.    ..-+-+|.+++.++..++.+.+ .|++++++.++.|.+ |...+......+..+++++|++++ +++++
T Consensus       135 pee~nR~----~~~~~a~~~~~~te~~~~~l~~-~G~~~~~I~vtGnp~~D~~~~~~~~~~~~~~~~~lgl~~~-~~iLv  208 (385)
T 4hwg_A          135 PEEINRK----IIDHISDVNITLTEHARRYLIA-EGLPAELTFKSGSHMPEVLDRFMPKILKSDILDKLSLTPK-QYFLI  208 (385)
T ss_dssp             THHHHHH----HHHHHCSEEEESSHHHHHHHHH-TTCCGGGEEECCCSHHHHHHHHHHHHHHCCHHHHTTCCTT-SEEEE
T ss_pred             cHHHHHH----HHHhhhceeecCCHHHHHHHHH-cCCCcCcEEEECCchHHHHHHhhhhcchhHHHHHcCCCcC-CEEEE
Confidence            0001111    1123478899999999999988 689889999999854 432221112234567888999774 47777


Q ss_pred             Eecccc---cccChHHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhhh------cCcEEEecCCCHHHHHHHHHHcCEEE
Q 039338          316 VAGRLV---KDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDF------GHQVLVMGSMSPAELRAFYNAIDIFV  386 (493)
Q Consensus       316 ~~Gr~~---~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~l------~~~V~~~g~~~~~~~~~~~~~adv~v  386 (493)
                      +.||..   ..|+++.+++|+.++.+++ ++++++.......+.++++      .++|.+.+.++..++..+|+.||+++
T Consensus       209 t~hr~e~~~~~~~l~~ll~al~~l~~~~-~~~vv~p~~p~~~~~l~~~~~~~~~~~~v~l~~~lg~~~~~~l~~~adlvv  287 (385)
T 4hwg_A          209 SSHREENVDVKNNLKELLNSLQMLIKEY-NFLIIFSTHPRTKKRLEDLEGFKELGDKIRFLPAFSFTDYVKLQMNAFCIL  287 (385)
T ss_dssp             EECCC-----CHHHHHHHHHHHHHHHHH-CCEEEEEECHHHHHHHHTSGGGGGTGGGEEECCCCCHHHHHHHHHHCSEEE
T ss_pred             EeCCchhcCcHHHHHHHHHHHHHHHhcC-CeEEEEECChHHHHHHHHHHHHhcCCCCEEEEcCCCHHHHHHHHHhCcEEE
Confidence            888753   3478899999999997765 6777775543344455544      26899999999899999999999999


Q ss_pred             eCCCCCCCCChHHHHHHHcCCcEEecCCCC-CccceeeeCcceEEECCCHHHHHHHHHHHHHcCcHHHHHHHHHHHHH-H
Q 039338          387 NPTLRPQGLDLTLMEAMMSGKPVMASRFPS-IKGTIVVDDEFGFMFAPNVESLHKTLEAAVSEGPMRLAQRGEACRQY-A  464 (493)
Q Consensus       387 ~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~-~~~e~v~~~~~G~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~-~  464 (493)
                      .+|      |....||+++|+|+|+.+... .+ |.+..| ++.++..|++++.+++.++++| ++.++.|++++..+ .
T Consensus       288 t~S------Ggv~~EA~alG~Pvv~~~~~ter~-e~v~~G-~~~lv~~d~~~i~~ai~~ll~d-~~~~~~m~~~~~~~~g  358 (385)
T 4hwg_A          288 SDS------GTITEEASILNLPALNIREAHERP-EGMDAG-TLIMSGFKAERVLQAVKTITEE-HDNNKRTQGLVPDYNE  358 (385)
T ss_dssp             ECC------TTHHHHHHHTTCCEEECSSSCSCT-HHHHHT-CCEECCSSHHHHHHHHHHHHTT-CBTTBCCSCCCHHHHT
T ss_pred             ECC------ccHHHHHHHcCCCEEEcCCCccch-hhhhcC-ceEEcCCCHHHHHHHHHHHHhC-hHHHHHhhccCCCCCC
Confidence            655      236799999999999986544 34 665544 6777766999999999999998 77666666555544 2


Q ss_pred             HHhcCHHHHHHHHHHHHHH
Q 039338          465 ASMFTANKMALAYERLFLC  483 (493)
Q Consensus       465 ~~~fs~~~~~~~~~~~~~~  483 (493)
                      .. .+.+++++.+.+.+..
T Consensus       359 ~g-~aa~rI~~~l~~~~~~  376 (385)
T 4hwg_A          359 AG-LVSKKILRIVLSYVDY  376 (385)
T ss_dssp             CC-CHHHHHHHHHHHHHHH
T ss_pred             CC-hHHHHHHHHHHHHhhh
Confidence            22 4566677766666543

>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*

Probab=99.79  E-value=3.1e-18  Score=169.63  Aligned_cols=353  Identities=15%  Similarity=0.121  Sum_probs=198.2

Q ss_pred             CCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCC-C-
Q 039338           81 KFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGE-A-  158 (493)
Q Consensus        81 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-  158 (493)
                      .+.|||++++.      ...|.-..+..|+++|+++||+|++++.....  .. ...        .+. .+...... + 
T Consensus        18 ~~m~rIl~~~~------~~~GHv~p~l~La~~L~~~Gh~V~v~~~~~~~--~~-~~~--------~G~-~~~~~~~~~~~   79 (415)
T 3rsc_A           18 RHMAHLLIVNV------ASHGLILPTLTVVTELVRRGHRVSYVTAGGFA--EP-VRA--------AGA-TVVPYQSEIID   79 (415)
T ss_dssp             -CCCEEEEECC------SCHHHHGGGHHHHHHHHHTTCEEEEEECGGGH--HH-HHH--------TTC-EEEECCCSTTT
T ss_pred             ccCCEEEEEeC------CCccccccHHHHHHHHHHCCCEEEEEeCHHHH--HH-HHh--------cCC-EEEeccccccc
Confidence            34589999985      34677778899999999999999999954321  00 000        000 01110000 0 


Q ss_pred             ----------Ccc---------ccccchHHHHHHhcCCCCcEEEeC-ccchhH---HhhhccCcEEEEeccchhhhhhh-
Q 039338          159 ----------DKW---------RYSKGWEQFDEENQREPFDVVHSE-SVALPH---WLARNVTNLAVSWHGIALESLQS-  214 (493)
Q Consensus       159 ----------~~~---------~~~~~~~~~~~~~~~~~~DiI~~~-~~~~~~---~~~~~~p~~v~~~h~~~~~~~~~-  214 (493)
                                ...         ........+.+.+++.+||+|++. ...+..   ....++| ++...++........ 
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~PDlVi~d~~~~~~~~~aA~~~giP-~v~~~~~~~~~~~~~~  158 (415)
T 3rsc_A           80 ADAAEVFGSDDLGVRPHLMYLRENVSVLRATAEALDGDVPDLVLYDDFPFIAGQLLAARWRRP-AVRLSAAFASNEHYSF  158 (415)
T ss_dssp             CCHHHHHHSSSSCHHHHHHHHHHHHHHHHHHHHHHSSSCCSEEEEESTTHHHHHHHHHHTTCC-EEEEESSCCCCSSCCH
T ss_pred             cccchhhccccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEECchhhhHHHHHHHHhCCC-EEEEEecccccCcccc
Confidence                      000         001123455666778899999987 332222   2334678 777776654211100 


Q ss_pred             --hhhhhhhcCCCCccchHhHhHHHHHHHHHHHH-------HHhhccC-CeEEEcChhHHHHHHHHhCCCCCcEEEecCC
Q 039338          215 --GIFQDLTRKPLEPMSLAFNKSLQGVMLKVLNE-------IRFFNKY-AHHVAISDSCGEMLRDVYQIPSERVHVILNG  284 (493)
Q Consensus       215 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~-d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ng  284 (493)
                        .......  ...+.   ....+...+.+....       ..+.... +..++......+......   ..++..+.+.
T Consensus       159 ~~~~~~~~~--~~~p~---~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~---~~~~~~vGp~  230 (415)
T 3rsc_A          159 SQDMVTLAG--TIDPL---DLPVFRDTLRDLLAEHGLSRSVVDCWNHVEQLNLVFVPKAFQIAGDTF---DDRFVFVGPC  230 (415)
T ss_dssp             HHHHHHHHT--CCCGG---GCHHHHHHHHHHHHHTTCCCCHHHHHTCCCSEEEESSCTTTSTTGGGC---CTTEEECCCC
T ss_pred             ccccccccc--cCChh---hHHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcCcccCCCcccC---CCceEEeCCC
Confidence              0000000  00000   001111112111110       0111112 555555544433332211   2334444332


Q ss_pred             ccCCCccCCcccchhhhhhhCCCCCCcEEEEEecccccccChHHHHHHHHHHHhhCCCeEEEE-EeCCCcHHHHhhhcCc
Q 039338          285 INENEYGVDLSLGQSFRSRIGIPKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIV-AGSGPWEQRYKDFGHQ  363 (493)
Q Consensus       285 vd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i-~G~g~~~~~~~~l~~~  363 (493)
                      +....     .    .........+++.++++.|+..... .+.+..++..+.+ .+ +++++ +|.+...+.++++.++
T Consensus       231 ~~~~~-----~----~~~~~~~~~~~~~v~v~~Gs~~~~~-~~~~~~~~~al~~-~~-~~~v~~~g~~~~~~~l~~~~~~  298 (415)
T 3rsc_A          231 FDDRR-----F----LGEWTRPADDLPVVLVSLGTTFNDR-PGFFRDCARAFDG-QP-WHVVMTLGGQVDPAALGDLPPN  298 (415)
T ss_dssp             CCCCG-----G----GCCCCCCSSCCCEEEEECTTTSCCC-HHHHHHHHHHHTT-SS-CEEEEECTTTSCGGGGCCCCTT
T ss_pred             CCCcc-----c----CcCccccCCCCCEEEEECCCCCCCh-HHHHHHHHHHHhc-CC-cEEEEEeCCCCChHHhcCCCCc
Confidence            21110     0    0000011234558888999986433 2333333333322 23 67766 6766566666667789


Q ss_pred             EEEecCCCHHHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCC----CccceeeeCcceEEECC---CHH
Q 039338          364 VLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPS----IKGTIVVDDEFGFMFAP---NVE  436 (493)
Q Consensus       364 V~~~g~~~~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~----~~~e~v~~~~~G~~~~~---d~~  436 (493)
                      |.+.|++++.   ++++.||++|..+    | ..+++|||++|+|+|+....+    .. +.+.+.+.|..++.   +++
T Consensus       299 v~~~~~~~~~---~ll~~ad~~v~~~----G-~~t~~Ea~~~G~P~v~~p~~~~q~~~a-~~l~~~g~g~~~~~~~~~~~  369 (415)
T 3rsc_A          299 VEAHRWVPHV---KVLEQATVCVTHG----G-MGTLMEALYWGRPLVVVPQSFDVQPMA-RRVDQLGLGAVLPGEKADGD  369 (415)
T ss_dssp             EEEESCCCHH---HHHHHEEEEEESC----C-HHHHHHHHHTTCCEEECCCSGGGHHHH-HHHHHHTCEEECCGGGCCHH
T ss_pred             EEEEecCCHH---HHHhhCCEEEECC----c-HHHHHHHHHhCCCEEEeCCcchHHHHH-HHHHHcCCEEEcccCCCCHH
Confidence            9999999754   8899999999643    2 358999999999999965432    22 45566778988875   789


Q ss_pred             HHHHHHHHHHHcCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Q 039338          437 SLHKTLEAAVSEGPMRLAQRGEACRQYAASMFTANKMALAYERLFLC  483 (493)
Q Consensus       437 ~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~  483 (493)
                      ++++++.++++| ++.++++.+.+++.... ..++++++.+++++.+
T Consensus       370 ~l~~~i~~ll~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~  414 (415)
T 3rsc_A          370 TLLAAVGAVAAD-PALLARVEAMRGHVRRA-GGAARAADAVEAYLAR  414 (415)
T ss_dssp             HHHHHHHHHHTC-HHHHHHHHHHHHHHHHS-CHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcC-HHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHhhc
Confidence            999999999999 88888888777776554 6888899888887754

>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A

Probab=99.79  E-value=3.2e-18  Score=170.86  Aligned_cols=331  Identities=11%  Similarity=0.058  Sum_probs=210.4

Q ss_pred             CCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCCCc
Q 039338           81 KFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEADK  160 (493)
Q Consensus        81 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (493)
                      .++.+|.+++..+    ...-+.+....+.++ .+..+||++++ ....  +...         ......++.....   
T Consensus       273 ~K~l~ig~ls~f~----~~HsV~r~~~~~l~~-dR~~FEV~~Ys-~~~~--D~~t---------r~~~d~f~~l~~~---  332 (631)
T 3q3e_A          273 NKPVMVVLLEHFH----SAHSIYRTHSTSMIA-AREHFYLIGLG-SPSV--DQAG---------QEVFDEFHLVAGD---  332 (631)
T ss_dssp             TEEEEEEECSSCC----TTSHHHHHHHHHHHH-HTTTSEEEEEE-CTTS--CHHH---------HTTSSEEEECCCS---
T ss_pred             CCeEEEEEeCccc----CCCcHHHHHHHHHHh-hhhcEEEEEEe-CCCC--CHHH---------HhcCcEEEECCCC---
Confidence            4556777777754    445555666666666 46679999998 3322  1110         1111222221111   


Q ss_pred             cccccchHHHHHHhcCCCCcEEEeCc---cchhHHh--hhccCcEEEEeccchhhhhhhhhhhhhhcCCCCccchHhHhH
Q 039338          161 WRYSKGWEQFDEENQREPFDVVHSES---VALPHWL--ARNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKS  235 (493)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~DiI~~~~---~~~~~~~--~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (493)
                       ........+.+.+++.++||++--+   .....++  .+..| +.+++-|++...                        
T Consensus       333 -s~~~~~~~ia~~Ir~d~IDILVdL~g~t~~~~i~~aa~RpAP-VQvs~lGyp~TT------------------------  386 (631)
T 3q3e_A          333 -NMKQKLEFIRSVCESNGAAIFYMPSIGMDMTTIFASNTRLAP-IQAIALGHPATT------------------------  386 (631)
T ss_dssp             -SHHHHHHHHHHHHHHHTCSEEEESCCSSSHHHHHHTTSCCSS-EEEEECSSCSCC------------------------
T ss_pred             -CccccHHHHHHHHHhcCCCEEEECCCCCCchhHHHHhCCCch-heEeccCCCccc------------------------
Confidence             0011245677777888999997633   2333333  35557 999998865321                        


Q ss_pred             HHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCCCCC-CcEEE
Q 039338          236 LQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKN-ASLVL  314 (493)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~-~~~~i  314 (493)
                                   -+...|.+++-.....  -...   -.+++..+|+..-.  +.+...  ...+..+|++.+ +.++|
T Consensus       387 -------------Gl~~iDY~i~D~~~~~--~~~~---ysEklirLP~~~~~--~~p~~~--~p~r~~~~lp~~~G~v~F  444 (631)
T 3q3e_A          387 -------------HSDFIEYVIVEDDYVG--SEEC---FSETLLRLPKDALP--YVPSAL--APEKVDYLLRENPEVVNI  444 (631)
T ss_dssp             -------------CCTTCCEEEEEGGGCC--CGGG---CSSEEEEECTTSSC--CCCCTT--CCSSCCCCCCSCCSEEEE
T ss_pred             -------------CcccCCEEEeCCCCCC--cccC---ceeeEEECCCCccc--cCCccc--CCccccccCCcCCCeEEE
Confidence                         1234566665332111  1222   25788888864211  112111  123566788774 45888


Q ss_pred             EEecccccccChHHHHHHHHHHHhhCCCeEEE--EEeCC--CcHHHHhh-----hcCcEEEecCCCHHHHHHHHHHcCEE
Q 039338          315 GVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLI--VAGSG--PWEQRYKD-----FGHQVLVMGSMSPAELRAFYNAIDIF  385 (493)
Q Consensus       315 ~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~--i~G~g--~~~~~~~~-----l~~~V~~~g~~~~~~~~~~~~~adv~  385 (493)
                      +++++.  .|..+.++++|.++.++.|+..++  ++|++  ......++     +.++|.|.|.++.++....|+.+|++
T Consensus       445 g~fn~~--~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~g~~~~~~~~~~~~GI~~Rv~F~g~~p~~e~la~y~~aDIf  522 (631)
T 3q3e_A          445 GIASTT--MKLNPYFLEALKAIRDRAKVKVHFHFALGQSNGITHPYVERFIKSYLGDSATAHPHSPYHQYLRILHNCDMM  522 (631)
T ss_dssp             EEEECS--TTCCHHHHHHHHHHHHHCSSEEEEEEEESSCCGGGHHHHHHHHHHHHGGGEEEECCCCHHHHHHHHHTCSEE
T ss_pred             EECCcc--ccCCHHHHHHHHHHHHhCCCcEEEEEecCCCchhhHHHHHHHHHcCCCccEEEcCCCCHHHHHHHHhcCcEE
Confidence            888875  599999999999999999987764  35632  33332222     23799999999999999999999999


Q ss_pred             EeCCCCCCCCChHHHHHHHcCCcEEecCCCCCccceee------eCcceEEECCCHHHHHHHHHHHHHcCcHHHHHHHHH
Q 039338          386 VNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVV------DDEFGFMFAPNVESLHKTLEAAVSEGPMRLAQRGEA  459 (493)
Q Consensus       386 v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~------~~~~G~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~  459 (493)
                      +.|+.  .+.|++.+|||+||+|||+...++.. ..+.      -|-.++++..|.+++++...++..| ++.+++++++
T Consensus       523 LDpfp--y~GgtTtlEALwmGVPVVTl~G~~~a-sRvgaSlL~~~GLpE~LIA~d~eeYv~~Av~La~D-~~~l~~LR~~  598 (631)
T 3q3e_A          523 VNPFP--FGNTNGIIDMVTLGLVGVCKTGAEVH-EHIDEGLFKRLGLPEWLIANTVDEYVERAVRLAEN-HQERLELRRY  598 (631)
T ss_dssp             ECCSS--SCCSHHHHHHHHTTCCEEEECCSSHH-HHHHHHHHHHTTCCGGGEESSHHHHHHHHHHHHHC-HHHHHHHHHH
T ss_pred             EeCCc--ccCChHHHHHHHcCCCEEeccCCcHH-HHhHHHHHHhcCCCcceecCCHHHHHHHHHHHhCC-HHHHHHHHHH
Confidence            99983  46699999999999999997655444 2221      1333433333889999999999999 9999999999


Q ss_pred             HHHHHHH--hcCHHHHHHHHHHHHHHHhhc
Q 039338          460 CRQYAAS--MFTANKMALAYERLFLCIKNE  487 (493)
Q Consensus       460 ~~~~~~~--~fs~~~~~~~~~~~~~~i~~~  487 (493)
                      .++....  .|+  ...+++++.|+++.++
T Consensus       599 Lr~~~~~spLFd--~~~~~~e~~ye~~~~~  626 (631)
T 3q3e_A          599 IIENNGLNTLFT--GDPRPMGQVFLEKLNA  626 (631)
T ss_dssp             HHHSCCHHHHTC--SCCTHHHHHHHHHHHH
T ss_pred             HHHHhhhCCCcc--hhHHHHHHHHHHHHHH
Confidence            9887644  344  4455666666655543

>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}

Probab=99.75  E-value=7.3e-17  Score=158.05  Aligned_cols=157  Identities=18%  Similarity=0.163  Sum_probs=118.4

Q ss_pred             CCcEEEEEecccccc-------cChHHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhhhcCcEEEecCCCHHHHHHHHHH
Q 039338          309 NASLVLGVAGRLVKD-------KGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDFGHQVLVMGSMSPAELRAFYNA  381 (493)
Q Consensus       309 ~~~~~i~~~Gr~~~~-------Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~l~~~V~~~g~~~~~~~~~~~~~  381 (493)
                      +++.+++++|++...       +.+..+++++..+     +++++++++++..+.++.+.++|.+ |++++   .++|+.
T Consensus       209 ~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~-----~~~~~~~~g~~~~~~l~~~~~~v~~-~~~~~---~~~l~~  279 (384)
T 2p6p_A          209 TRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRW-----DVELIVAAPDTVAEALRAEVPQARV-GWTPL---DVVAPT  279 (384)
T ss_dssp             SSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTT-----TCEEEEECCHHHHHHHHHHCTTSEE-ECCCH---HHHGGG
T ss_pred             CCCEEEEECCCCCccccccccHHHHHHHHHHHhcC-----CcEEEEEeCCCCHHhhCCCCCceEE-cCCCH---HHHHhh
Confidence            445788899999865       5667777776543     5788876554444445556789999 99975   457899


Q ss_pred             cCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCC----CccceeeeCcceEEECC---CHHHHHHHHHHHHHcCcHHHH
Q 039338          382 IDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPS----IKGTIVVDDEFGFMFAP---NVESLHKTLEAAVSEGPMRLA  454 (493)
Q Consensus       382 adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~----~~~e~v~~~~~G~~~~~---d~~~l~~~i~~ll~~~~~~~~  454 (493)
                      ||++|..+    | +++++|||++|+|+|+.+..+    .. +.+.+.+.|+.++.   ++++++++|.++++| ++.++
T Consensus       280 ~d~~v~~~----G-~~t~~Ea~~~G~P~v~~p~~~dq~~~a-~~~~~~g~g~~~~~~~~~~~~l~~~i~~ll~~-~~~~~  352 (384)
T 2p6p_A          280 CDLLVHHA----G-GVSTLTGLSAGVPQLLIPKGSVLEAPA-RRVADYGAAIALLPGEDSTEAIADSCQELQAK-DTYAR  352 (384)
T ss_dssp             CSEEEECS----C-TTHHHHHHHTTCCEEECCCSHHHHHHH-HHHHHHTSEEECCTTCCCHHHHHHHHHHHHHC-HHHHH
T ss_pred             CCEEEeCC----c-HHHHHHHHHhCCCEEEccCcccchHHH-HHHHHCCCeEecCcCCCCHHHHHHHHHHHHcC-HHHHH
Confidence            99999743    2 458999999999999998643    33 44666778999874   789999999999998 88888


Q ss_pred             HHHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 039338          455 QRGEACRQYAASMFTANKMALAYERLFL  482 (493)
Q Consensus       455 ~~~~~~~~~~~~~fs~~~~~~~~~~~~~  482 (493)
                      ++++.+++.... -..+++++.++++..
T Consensus       353 ~~~~~~~~~~~~-~~~~~~~~~i~~~~~  379 (384)
T 2p6p_A          353 RAQDLSREISGM-PLPATVVTALEQLAH  379 (384)
T ss_dssp             HHHHHHHHHHTS-CCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhC-CCHHHHHHHHHHHhh
Confidence            888877766555 477888877776654

>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*

Probab=99.71  E-value=8.3e-16  Score=161.02  Aligned_cols=183  Identities=15%  Similarity=0.179  Sum_probs=144.2

Q ss_pred             hhhhhhCCCCCCcEEEEEecccccccChHHHHHHHHHHHhhCCCeEEEEEeCCCcH-HHH----hhhc---CcEEEecCC
Q 039338          299 SFRSRIGIPKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWE-QRY----KDFG---HQVLVMGSM  370 (493)
Q Consensus       299 ~~r~~~~i~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~-~~~----~~l~---~~V~~~g~~  370 (493)
                      ..|..+|++++. ++|+++.++.  |-.+.++++|.++.++.|+.+|++...+... +.+    ++.+   ++|+|.+..
T Consensus       512 ~~R~~~gLp~~~-v~f~~fN~~~--Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~~~~~l~~~~~~~gi~~~r~~f~~~~  588 (723)
T 4gyw_A          512 TTRSQYGLPEDA-IVYCNFNQLY--KIDPSTLQMWANILKRVPNSVLWLLRFPAVGEPNIQQYAQNMGLPQNRIIFSPVA  588 (723)
T ss_dssp             EEGGGGTCCTTS-EEEECCSCGG--GCCHHHHHHHHHHHHHCSSEEEEEEETTGGGHHHHHHHHHHTTCCGGGEEEEECC
T ss_pred             cchhhcCCCCCC-EEEEeCCccc--cCCHHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHHHHHHHhcCCCcCeEEECCCC
Confidence            457889999887 8887777665  8889999999999999999999998765432 222    2223   789999999


Q ss_pred             CHHHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCccc----eeeeCcceEEECCCHHHHHHHHHHHH
Q 039338          371 SPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGT----IVVDDEFGFMFAPNVESLHKTLEAAV  446 (493)
Q Consensus       371 ~~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e----~v~~~~~G~~~~~d~~~l~~~i~~ll  446 (493)
                      +.++....|+.+|+++.|.  +.+-++|.+||+++|+|||+-....+...    ++..-+..-++..|.+++.+...++.
T Consensus       589 ~~~~~l~~~~~~Di~LDt~--p~~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~~gl~e~ia~~~~~Y~~~a~~la  666 (723)
T 4gyw_A          589 PKEEHVRRGQLADVCLDTP--LCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCLGCLELIAKNRQEYEDIAVKLG  666 (723)
T ss_dssp             CHHHHHHHGGGCSEEECCS--SSCCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHHHTCGGGBCSSHHHHHHHHHHHH
T ss_pred             CHHHHHHHhCCCeEEeCCC--CcCCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHHcCCcccccCCHHHHHHHHHHHh
Confidence            9999999999999999987  45778999999999999998764333310    11111111123338899999999999


Q ss_pred             HcCcHHHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHhhc
Q 039338          447 SEGPMRLAQRGEACRQYAAS--MFTANKMALAYERLFLCIKNE  487 (493)
Q Consensus       447 ~~~~~~~~~~~~~~~~~~~~--~fs~~~~~~~~~~~~~~i~~~  487 (493)
                      .| ++.+.+++++.++....  -|+.+..++.+++.|+++..+
T Consensus       667 ~d-~~~l~~lr~~l~~~~~~s~l~d~~~~~~~le~a~~~~w~r  708 (723)
T 4gyw_A          667 TD-LEYLKKVRGKVWKQRISSPLFNTKQYTMELERLYLQMWEH  708 (723)
T ss_dssp             HC-HHHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHHHHHH
T ss_pred             cC-HHHHHHHHHHHHHHHHhCcCcCHHHHHHHHHHHHHHHHHH
Confidence            99 99999999999888766  499999999999999998643

>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}

Probab=99.71  E-value=4e-16  Score=155.62  Aligned_cols=159  Identities=13%  Similarity=0.060  Sum_probs=117.8

Q ss_pred             CCCcEEEEEecccccc-----cChHHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhhhcCcEEEecCCCHHHHHHHHHHc
Q 039338          308 KNASLVLGVAGRLVKD-----KGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDFGHQVLVMGSMSPAELRAFYNAI  382 (493)
Q Consensus       308 ~~~~~~i~~~Gr~~~~-----Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~l~~~V~~~g~~~~~~~~~~~~~a  382 (493)
                      ++++.++++.|+....     +.+..+++++..+     ++++++.+++...+.++++.++|.+.|++++.   ++|..|
T Consensus       265 ~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~-----~~~~v~~~g~~~~~~l~~~~~~v~~~~~~~~~---~ll~~a  336 (441)
T 2yjn_A          265 PERRRVCLTLGISSRENSIGQVSIEELLGAVGDV-----DAEIIATFDAQQLEGVANIPDNVRTVGFVPMH---ALLPTC  336 (441)
T ss_dssp             CSSCEEEEEC----------CCSTTTTHHHHHTS-----SSEEEECCCTTTTSSCSSCCSSEEECCSCCHH---HHGGGC
T ss_pred             CCCCEEEEECCCCcccccChHHHHHHHHHHHHcC-----CCEEEEEECCcchhhhccCCCCEEEecCCCHH---HHHhhC
Confidence            4455788899998753     7788888887654     57888876655443343456899999999854   568999


Q ss_pred             CEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCC----CccceeeeCcceEEECC---CHHHHHHHHHHHHHcCcHHHHH
Q 039338          383 DIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPS----IKGTIVVDDEFGFMFAP---NVESLHKTLEAAVSEGPMRLAQ  455 (493)
Q Consensus       383 dv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~----~~~e~v~~~~~G~~~~~---d~~~l~~~i~~ll~~~~~~~~~  455 (493)
                      |++|..     |.+.+++|||++|+|+|+.+..+    .. +.+.+.+.|+.++.   ++++++++|.++++| ++.+++
T Consensus       337 d~~V~~-----~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na-~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~-~~~~~~  409 (441)
T 2yjn_A          337 AATVHH-----GGPGSWHTAAIHGVPQVILPDGWDTGVRA-QRTQEFGAGIALPVPELTPDQLRESVKRVLDD-PAHRAG  409 (441)
T ss_dssp             SEEEEC-----CCHHHHHHHHHTTCCEEECCCSHHHHHHH-HHHHHHTSEEECCTTTCCHHHHHHHHHHHHHC-HHHHHH
T ss_pred             CEEEEC-----CCHHHHHHHHHhCCCEEEeCCcccHHHHH-HHHHHcCCEEEcccccCCHHHHHHHHHHHhcC-HHHHHH
Confidence            999962     33579999999999999998743    22 45667788999875   789999999999998 888888


Q ss_pred             HHHHHHHHHHHhcCHHHHHHHHHHHHH
Q 039338          456 RGEACRQYAASMFTANKMALAYERLFL  482 (493)
Q Consensus       456 ~~~~~~~~~~~~fs~~~~~~~~~~~~~  482 (493)
                      +++.+++.... ...+++++.+++++.
T Consensus       410 ~~~~~~~~~~~-~~~~~~~~~i~~~~~  435 (441)
T 2yjn_A          410 AARMRDDMLAE-PSPAEVVGICEELAA  435 (441)
T ss_dssp             HHHHHHHHHTS-CCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcC-CCHHHHHHHHHHHHH
Confidence            88877766554 688888888887764

>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}

Probab=99.68  E-value=1.2e-14  Score=144.31  Aligned_cols=160  Identities=14%  Similarity=0.076  Sum_probs=113.4

Q ss_pred             CCcEEEEEecccccccChHHHHHHHHHHHhhCCCeEE-EEEeCCCcHHHHhhhcCcEEEecCCCHHHHHHHHHHcCEEEe
Q 039338          309 NASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYL-IVAGSGPWEQRYKDFGHQVLVMGSMSPAELRAFYNAIDIFVN  387 (493)
Q Consensus       309 ~~~~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l-~i~G~g~~~~~~~~l~~~V~~~g~~~~~~~~~~~~~adv~v~  387 (493)
                      +++.++++.|+.. .+..+.+.+++..+.+  .++++ +++|.+...+.+.++.++|.+.+++++.   ++|+.||++|.
T Consensus       254 ~~~~v~v~~Gs~~-~~~~~~~~~~~~al~~--~~~~~~~~~g~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~d~~v~  327 (424)
T 2iya_A          254 GRPVLLIALGSAF-TDHLDFYRTCLSAVDG--LDWHVVLSVGRFVDPADLGEVPPNVEVHQWVPQL---DILTKASAFIT  327 (424)
T ss_dssp             SCCEEEEECCSSS-CCCHHHHHHHHHHHTT--CSSEEEEECCTTSCGGGGCSCCTTEEEESSCCHH---HHHTTCSEEEE
T ss_pred             CCCEEEEEcCCCC-cchHHHHHHHHHHHhc--CCcEEEEEECCcCChHHhccCCCCeEEecCCCHH---HHHhhCCEEEE
Confidence            4457888999987 3444444444444533  35676 4568765444444566899999999854   68999999986


Q ss_pred             CCCCCCCCChHHHHHHHcCCcEEecCCCC----CccceeeeCcceEEECC---CHHHHHHHHHHHHHcCcHHHHHHHHHH
Q 039338          388 PTLRPQGLDLTLMEAMMSGKPVMASRFPS----IKGTIVVDDEFGFMFAP---NVESLHKTLEAAVSEGPMRLAQRGEAC  460 (493)
Q Consensus       388 ps~~~eg~~~~~~EAm~~G~PvI~s~~~~----~~~e~v~~~~~G~~~~~---d~~~l~~~i~~ll~~~~~~~~~~~~~~  460 (493)
                      .     +-.++++||+++|+|+|+....+    .. +.+.+.+.|+.++.   ++++++++|.++++| ++.++++++.+
T Consensus       328 ~-----~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na-~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~-~~~~~~~~~~~  400 (424)
T 2iya_A          328 H-----AGMGSTMEALSNAVPMVAVPQIAEQTMNA-ERIVELGLGRHIPRDQVTAEKLREAVLAVASD-PGVAERLAAVR  400 (424)
T ss_dssp             C-----CCHHHHHHHHHTTCCEEECCCSHHHHHHH-HHHHHTTSEEECCGGGCCHHHHHHHHHHHHHC-HHHHHHHHHHH
T ss_pred             C-----CchhHHHHHHHcCCCEEEecCccchHHHH-HHHHHCCCEEEcCcCCCCHHHHHHHHHHHHcC-HHHHHHHHHHH
Confidence            2     22479999999999999997643    12 34566778988874   889999999999998 77777776666


Q ss_pred             HHHHHHhcCHHHHHHHHHHHHH
Q 039338          461 RQYAASMFTANKMALAYERLFL  482 (493)
Q Consensus       461 ~~~~~~~fs~~~~~~~~~~~~~  482 (493)
                      ++... ....++.++.+++++.
T Consensus       401 ~~~~~-~~~~~~~~~~i~~~~~  421 (424)
T 2iya_A          401 QEIRE-AGGARAAADILEGILA  421 (424)
T ss_dssp             HHHHT-SCHHHHHHHHHHHHHH
T ss_pred             HHHHh-cCcHHHHHHHHHHHHh
Confidence            55443 3566777777776654

>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*

Probab=99.59  E-value=1e-14  Score=143.44  Aligned_cols=161  Identities=14%  Similarity=0.096  Sum_probs=104.9

Q ss_pred             CCCCcEEEEEecccccccC-hHHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhhhcCcEEEecCCCHHHHHHHHHHcCEE
Q 039338          307 PKNASLVLGVAGRLVKDKG-HPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDFGHQVLVMGSMSPAELRAFYNAIDIF  385 (493)
Q Consensus       307 ~~~~~~~i~~~Gr~~~~Kg-~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~l~~~V~~~g~~~~~~~~~~~~~adv~  385 (493)
                      ..+++.++++.|++...++ .+.+.+++..+.+  .+.++++.+.+...+....+.+++.+.+++|+.   +++..+|++
T Consensus       234 ~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~--~~~~~v~~~~~~~~~~~~~~~~~v~~~~~~p~~---~lL~~~~~~  308 (400)
T 4amg_A          234 AAGRRRIAVTLGSIDALSGGIAKLAPLFSEVAD--VDAEFVLTLGGGDLALLGELPANVRVVEWIPLG---ALLETCDAI  308 (400)
T ss_dssp             CTTCCEEEECCCSCC--CCSSSTTHHHHHHGGG--SSSEEEEECCTTCCCCCCCCCTTEEEECCCCHH---HHHTTCSEE
T ss_pred             cCCCcEEEEeCCcccccCccHHHHHHHHHHhhc--cCceEEEEecCccccccccCCCCEEEEeecCHH---HHhhhhhhe
Confidence            3455577888898865443 3444555555544  356666666554444445566899999999765   567889999


Q ss_pred             EeCCCCCCCCChHHHHHHHcCCcEEecCCCCCcc---ceeeeCcceEEECCCHHHHHHHHHHHHHcCcHHHHHHHHHHHH
Q 039338          386 VNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKG---TIVVDDEFGFMFAPNVESLHKTLEAAVSEGPMRLAQRGEACRQ  462 (493)
Q Consensus       386 v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~---e~v~~~~~G~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~~~  462 (493)
                      |.     .+-.++++|||++|+|+|+....+-..   +.+++.+.|+.++. .+..+++|.++++| ++.+++..+-+++
T Consensus       309 v~-----h~G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v~~~G~g~~l~~-~~~~~~al~~lL~d-~~~r~~a~~l~~~  381 (400)
T 4amg_A          309 IH-----HGGSGTLLTALAAGVPQCVIPHGSYQDTNRDVLTGLGIGFDAEA-GSLGAEQCRRLLDD-AGLREAALRVRQE  381 (400)
T ss_dssp             EE-----CCCHHHHHHHHHHTCCEEECCC---CHHHHHHHHHHTSEEECCT-TTCSHHHHHHHHHC-HHHHHHHHHHHHH
T ss_pred             ec-----cCCccHHHHHHHhCCCEEEecCcccHHHHHHHHHHCCCEEEcCC-CCchHHHHHHHHcC-HHHHHHHHHHHHH
Confidence            85     233569999999999999987654210   34555667887774 34467889999998 7766555444433


Q ss_pred             HHHHhcCHHHHHHHHHHH
Q 039338          463 YAASMFTANKMALAYERL  480 (493)
Q Consensus       463 ~~~~~fs~~~~~~~~~~~  480 (493)
                       +...-+....++.++++
T Consensus       382 -~~~~~~~~~~a~~le~l  398 (400)
T 4amg_A          382 -MSEMPPPAETAAXLVAL  398 (400)
T ss_dssp             -HHTSCCHHHHHHHHHHH
T ss_pred             -HHcCCCHHHHHHHHHHh
Confidence             33434777777777664

>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5

Probab=99.52  E-value=3.8e-13  Score=132.87  Aligned_cols=156  Identities=17%  Similarity=0.164  Sum_probs=104.8

Q ss_pred             CcEEEEEeccc-ccccChHHHHHHHHHHHhhCCCeEEEEE-eCCCcHHHHhhhcCcEEEecCCCHHHHHHHHHHcCEEEe
Q 039338          310 ASLVLGVAGRL-VKDKGHPLLHEAFSKLMVKYPDVYLIVA-GSGPWEQRYKDFGHQVLVMGSMSPAELRAFYNAIDIFVN  387 (493)
Q Consensus       310 ~~~~i~~~Gr~-~~~Kg~~~ll~a~~~l~~~~~~~~l~i~-G~g~~~~~~~~l~~~V~~~g~~~~~~~~~~~~~adv~v~  387 (493)
                      ++.++++.|+. ...+..+.+++++..+     +.+++++ |.+...  ...+.++|.+.+++++.+   ++.+||++|.
T Consensus       238 ~~~v~v~~Gs~~~~~~~~~~~~~al~~~-----~~~~v~~~g~~~~~--~~~~~~~v~~~~~~~~~~---~l~~~d~~v~  307 (415)
T 1iir_A          238 PPPVYLGFGSLGAPADAVRVAIDAIRAH-----GRRVILSRGWADLV--LPDDGADCFAIGEVNHQV---LFGRVAAVIH  307 (415)
T ss_dssp             SCCEEEECC---CCHHHHHHHHHHHHHT-----TCCEEECTTCTTCC--CSSCGGGEEECSSCCHHH---HGGGSSEEEE
T ss_pred             CCeEEEeCCCCCCcHHHHHHHHHHHHHC-----CCeEEEEeCCCccc--ccCCCCCEEEeCcCChHH---HHhhCCEEEe
Confidence            34678899998 4777788888888765     3455554 755432  133457999999998654   5799999996


Q ss_pred             CCCCCCCCChHHHHHHHcCCcEEecCCCC----CccceeeeCcceEEECC---CHHHHHHHHHHHHHcCcHHHHHHHHHH
Q 039338          388 PTLRPQGLDLTLMEAMMSGKPVMASRFPS----IKGTIVVDDEFGFMFAP---NVESLHKTLEAAVSEGPMRLAQRGEAC  460 (493)
Q Consensus       388 ps~~~eg~~~~~~EAm~~G~PvI~s~~~~----~~~e~v~~~~~G~~~~~---d~~~l~~~i~~ll~~~~~~~~~~~~~~  460 (493)
                      .    .| .++++|||++|+|+|+.+..+    .. +.+.+.+.|+.++.   +.+++.++|.++ +| ++.++++.+.+
T Consensus       308 ~----~G-~~t~~Ea~~~G~P~i~~p~~~dQ~~na-~~l~~~g~g~~~~~~~~~~~~l~~~i~~l-~~-~~~~~~~~~~~  379 (415)
T 1iir_A          308 H----GG-AGTTHVAARAGAPQILLPQMADQPYYA-GRVAELGVGVAHDGPIPTFDSLSAALATA-LT-PETHARATAVA  379 (415)
T ss_dssp             C----CC-HHHHHHHHHHTCCEEECCCSTTHHHHH-HHHHHHTSEEECSSSSCCHHHHHHHHHHH-TS-HHHHHHHHHHH
T ss_pred             C----CC-hhHHHHHHHcCCCEEECCCCCccHHHH-HHHHHCCCcccCCcCCCCHHHHHHHHHHH-cC-HHHHHHHHHHH
Confidence            3    23 469999999999999997644    22 34566678998864   789999999999 77 76666555544


Q ss_pred             HHHHHHhcCHHHHHHHHHHHHHHHhhcc
Q 039338          461 RQYAASMFTANKMALAYERLFLCIKNET  488 (493)
Q Consensus       461 ~~~~~~~fs~~~~~~~~~~~~~~i~~~~  488 (493)
                      ++.     ....-+++..+.+++++..+
T Consensus       380 ~~~-----~~~~~~~~~~~~i~~~~~~~  402 (415)
T 1iir_A          380 GTI-----RTDGAAVAARLLLDAVSREK  402 (415)
T ss_dssp             HHS-----CSCHHHHHHHHHHHHHHTC-
T ss_pred             HHH-----hhcChHHHHHHHHHHHHhcc
Confidence            432     22334444444455544443

>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*

Probab=99.50  E-value=7.8e-13  Score=130.07  Aligned_cols=156  Identities=17%  Similarity=0.118  Sum_probs=104.6

Q ss_pred             CCcEEEEEecccc-cccChHHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhhhcCcEEEecCCCHHHHHHHHHHcCEEEe
Q 039338          309 NASLVLGVAGRLV-KDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDFGHQVLVMGSMSPAELRAFYNAIDIFVN  387 (493)
Q Consensus       309 ~~~~~i~~~Gr~~-~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~l~~~V~~~g~~~~~~~~~~~~~adv~v~  387 (493)
                      +++.++++.|+.. ..+....+++++..+     ++++++.++....+. .++.++|.+.+++++.   +++..+|++|.
T Consensus       220 ~~~~Vlv~~Gs~~~~~~~~~~~~~al~~~-----~~~vv~~~g~~~~~~-~~~~~~v~~~~~~~~~---~ll~~~d~~v~  290 (404)
T 3h4t_A          220 GSPPVYVGFGSGPAPAEAARVAIEAVRAQ-----GRRVVLSSGWAGLGR-IDEGDDCLVVGEVNHQ---VLFGRVAAVVH  290 (404)
T ss_dssp             SSCCEEECCTTSCCCTTHHHHHHHHHHHT-----TCCEEEECTTTTCCC-SSCCTTEEEESSCCHH---HHGGGSSEEEE
T ss_pred             CCCeEEEECCCCCCcHHHHHHHHHHHHhC-----CCEEEEEeCCccccc-ccCCCCEEEecCCCHH---HHHhhCcEEEE
Confidence            4457788899987 556677777777665     466666644322211 1335899999999754   56789999996


Q ss_pred             CCCCCCCCChHHHHHHHcCCcEEecCCCCCcc---ceeeeCcceEEECC---CHHHHHHHHHHHHHcCcHHHHHHHHHHH
Q 039338          388 PTLRPQGLDLTLMEAMMSGKPVMASRFPSIKG---TIVVDDEFGFMFAP---NVESLHKTLEAAVSEGPMRLAQRGEACR  461 (493)
Q Consensus       388 ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~---e~v~~~~~G~~~~~---d~~~l~~~i~~ll~~~~~~~~~~~~~~~  461 (493)
                      .+    | ..++.||+++|+|+|+....+-..   +.+.+.+.|..++.   +++++.+++.++++  ++.++++.+.+.
T Consensus       291 ~g----G-~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~~~G~g~~l~~~~~~~~~l~~ai~~ll~--~~~~~~~~~~~~  363 (404)
T 3h4t_A          291 HG----G-AGTTTAVTRAGAPQVVVPQKADQPYYAGRVADLGVGVAHDGPTPTVESLSAALATALT--PGIRARAAAVAG  363 (404)
T ss_dssp             CC----C-HHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECSSSSCCHHHHHHHHHHHTS--HHHHHHHHHHHT
T ss_pred             CC----c-HHHHHHHHHcCCCEEEcCCcccHHHHHHHHHHCCCEeccCcCCCCHHHHHHHHHHHhC--HHHHHHHHHHHH
Confidence            32    3 368999999999999987644210   23556678888764   78999999999986  555555554444


Q ss_pred             HHHHHhcCHHHHHHHHHHHHH
Q 039338          462 QYAASMFTANKMALAYERLFL  482 (493)
Q Consensus       462 ~~~~~~fs~~~~~~~~~~~~~  482 (493)
                      +...  -..+++++.++++++
T Consensus       364 ~~~~--~~~~~~~~~i~~~~~  382 (404)
T 3h4t_A          364 TIRT--DGTTVAAKLLLEAIS  382 (404)
T ss_dssp             TCCC--CHHHHHHHHHHHHHH
T ss_pred             HHhh--hHHHHHHHHHHHHHh
Confidence            3322  255566666655543

>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5

Probab=99.43  E-value=7.1e-13  Score=131.02  Aligned_cols=135  Identities=15%  Similarity=0.080  Sum_probs=95.2

Q ss_pred             cEEEEEecccc---cccChHHHHHHHHHHHhhCCCeEEEEE-eCCCcHHHHhhhcCcEEEecCCCHHHHHHHHHHcCEEE
Q 039338          311 SLVLGVAGRLV---KDKGHPLLHEAFSKLMVKYPDVYLIVA-GSGPWEQRYKDFGHQVLVMGSMSPAELRAFYNAIDIFV  386 (493)
Q Consensus       311 ~~~i~~~Gr~~---~~Kg~~~ll~a~~~l~~~~~~~~l~i~-G~g~~~~~~~~l~~~V~~~g~~~~~~~~~~~~~adv~v  386 (493)
                      +.++++.|+..   ..+..+.+++++..+     +.+++++ |.+...  ...+.+++.+.+++++.   ++|.+||++|
T Consensus       238 ~~v~v~~Gs~~~~~~~~~~~~~~~al~~~-----~~~~v~~~g~~~~~--~~~~~~~v~~~~~~~~~---~ll~~~d~~v  307 (416)
T 1rrv_A          238 PPVHIGFGSSSGRGIADAAKVAVEAIRAQ-----GRRVILSRGWTELV--LPDDRDDCFAIDEVNFQ---ALFRRVAAVI  307 (416)
T ss_dssp             CCEEECCTTCCSHHHHHHHHHHHHHHHHT-----TCCEEEECTTTTCC--CSCCCTTEEEESSCCHH---HHGGGSSEEE
T ss_pred             CeEEEecCCCCccChHHHHHHHHHHHHHC-----CCeEEEEeCCcccc--ccCCCCCEEEeccCChH---HHhccCCEEE
Confidence            46777889985   356666777777655     3456554 755332  13455799999999854   5679999999


Q ss_pred             eCCCCCCCCChHHHHHHHcCCcEEecCCCCCc---cceeeeCcceEEECC---CHHHHHHHHHHHHHcCcHHHHHHHHHH
Q 039338          387 NPTLRPQGLDLTLMEAMMSGKPVMASRFPSIK---GTIVVDDEFGFMFAP---NVESLHKTLEAAVSEGPMRLAQRGEAC  460 (493)
Q Consensus       387 ~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~---~e~v~~~~~G~~~~~---d~~~l~~~i~~ll~~~~~~~~~~~~~~  460 (493)
                      ..    .| ..+++||+++|+|+|+....+-.   .+.+++.+.|..++.   +.+++.++|.++ .| ++.++++++.+
T Consensus       308 ~~----~G-~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~l-~~-~~~~~~~~~~~  380 (416)
T 1rrv_A          308 HH----GS-AGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAHDGPTPTFESLSAALTTV-LA-PETRARAEAVA  380 (416)
T ss_dssp             EC----CC-HHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHHTSEEECSSSCCCHHHHHHHHHHH-TS-HHHHHHHHHHT
T ss_pred             ec----CC-hhHHHHHHHcCCCEEEccCCCCcHHHHHHHHHCCCccCCCCCCCCHHHHHHHHHHh-hC-HHHHHHHHHHH
Confidence            62    23 46999999999999998764311   024556778888863   789999999999 77 76666665544


Q ss_pred             HH
Q 039338          461 RQ  462 (493)
Q Consensus       461 ~~  462 (493)
                      ++
T Consensus       381 ~~  382 (416)
T 1rrv_A          381 GM  382 (416)
T ss_dssp             TT
T ss_pred             HH
Confidence            43

>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}

Probab=99.34  E-value=2.9e-12  Score=109.82  Aligned_cols=129  Identities=12%  Similarity=0.163  Sum_probs=96.1

Q ss_pred             CCCcEEEEEecccc---cccChHHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhhhcCcEEEecCCCHHHHHHHHHHcCE
Q 039338          308 KNASLVLGVAGRLV---KDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDFGHQVLVMGSMSPAELRAFYNAIDI  384 (493)
Q Consensus       308 ~~~~~~i~~~Gr~~---~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~l~~~V~~~g~~~~~~~~~~~~~adv  384 (493)
                      .+++.+++++|++.   +.|.+..+++++..+     +.++++++++...+   .+.++|.+.|+++++++..+ ++||+
T Consensus        19 ~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~-----~~~~~~~~g~~~~~---~~~~~v~~~~~~~~~~~l~~-~~ad~   89 (170)
T 2o6l_A           19 GENGVVVFSLGSMVSNMTEERANVIASALAQI-----PQKVLWRFDGNKPD---TLGLNTRLYKWIPQNDLLGH-PKTRA   89 (170)
T ss_dssp             TTTCEEEEECCSCCTTCCHHHHHHHHHHHTTS-----SSEEEEECCSSCCT---TCCTTEEEESSCCHHHHHTS-TTEEE
T ss_pred             CCCCEEEEECCCCcccCCHHHHHHHHHHHHhC-----CCeEEEEECCcCcc---cCCCcEEEecCCCHHHHhcC-CCcCE
Confidence            34457888999986   556677777776543     36777776554322   35679999999987655433 99999


Q ss_pred             EEeCCCCCCCCChHHHHHHHcCCcEEecCCCCC----ccceeeeCcceEEECC---CHHHHHHHHHHHHHcCcHH
Q 039338          385 FVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSI----KGTIVVDDEFGFMFAP---NVESLHKTLEAAVSEGPMR  452 (493)
Q Consensus       385 ~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~----~~e~v~~~~~G~~~~~---d~~~l~~~i~~ll~~~~~~  452 (493)
                      +|..     +.+.+++|||++|+|+|+.+..+-    . +.+.+.+.|+.++.   ++++++++|.+++++ ++.
T Consensus        90 ~I~~-----~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na-~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~-~~~  157 (170)
T 2o6l_A           90 FITH-----GGANGIYEAIYHGIPMVGIPLFADQPDNI-AHMKARGAAVRVDFNTMSSTDLLNALKRVIND-PSY  157 (170)
T ss_dssp             EEEC-----CCHHHHHHHHHHTCCEEECCCSTTHHHHH-HHHHTTTSEEECCTTTCCHHHHHHHHHHHHHC-HHH
T ss_pred             EEEc-----CCccHHHHHHHcCCCEEeccchhhHHHHH-HHHHHcCCeEEeccccCCHHHHHHHHHHHHcC-HHH
Confidence            9963     235899999999999999987431    2 45677789999875   789999999999988 553

>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A*

Probab=99.24  E-value=2.3e-10  Score=116.92  Aligned_cols=232  Identities=13%  Similarity=0.109  Sum_probs=163.6

Q ss_pred             hhccCCeEEEcChhHHHHHHHH-----hCCCCCcEEEecCCccCCCcc----CC--------------------------
Q 039338          249 FFNKYAHHVAISDSCGEMLRDV-----YQIPSERVHVILNGINENEYG----VD--------------------------  293 (493)
Q Consensus       249 ~~~~~d~ii~~S~~~~~~~~~~-----~~~~~~~v~vi~ngvd~~~~~----~~--------------------------  293 (493)
                      .+..++.|-++|+...+.+++.     +..-+.++.-|-|||+...|-    |.                          
T Consensus       410 ai~~S~~VNgVS~lH~e~ik~~~f~~~~~~~p~k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~w~~d~~~l~~l~~~  489 (796)
T 1l5w_A          410 CVVGGFAVNGVAALHSDLVVKDLFPEYHQLWPNKFHNVTNGITPRRWIKQCNPALAALLDKSLQKEWANDLDQLINLEKF  489 (796)
T ss_dssp             HHHHSSEEEESSHHHHHHHHHTTSHHHHHHCGGGEEECCCCBCHHHHTTTTCHHHHHHHHHHCSSCCTTCGGGGGGGGGG
T ss_pred             HHHhcCccccccHHHHHHHHhHHhhHHHHhCccccCCCcCCCcHHHhhcccCHhHHHHHHHhcCcccccCHHHHHHHHhc
Confidence            3567899999999999988641     223356899999999887661    21                          


Q ss_pred             ccc--------------chh----hhhhhCCCCC-CcEEEEEecccccccChHH-HHHHHHHHHh--hC-----CCeEEE
Q 039338          294 LSL--------------GQS----FRSRIGIPKN-ASLVLGVAGRLVKDKGHPL-LHEAFSKLMV--KY-----PDVYLI  346 (493)
Q Consensus       294 ~~~--------------~~~----~r~~~~i~~~-~~~~i~~~Gr~~~~Kg~~~-ll~a~~~l~~--~~-----~~~~l~  346 (493)
                      .++              +..    +++++|++-+ +.+.++++.|+..+|++++ ++..+.++.+  .+     .+++++
T Consensus       490 ~~d~~~~~~l~~~K~~nK~~L~~~l~~~~Gl~vdpd~l~~~~vkRl~eYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~I  569 (796)
T 1l5w_A          490 ADDAKFRQQYREIKQANKVRLAEFVKVRTGIEINPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFL  569 (796)
T ss_dssp             GGCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEE
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCcceEeeeecchhhcccCEeHHHHHHHHHHHhcCCCCCCCCeEEE
Confidence            000              111    3556777543 2388899999999999999 8888877754  12     369999


Q ss_pred             EEeCCCc--HHH------Hhh----------hcC--cEEEecCCCHHHHHHHHHHcCEEEeCCCC-CCCCChHHHHHHHc
Q 039338          347 VAGSGPW--EQR------YKD----------FGH--QVLVMGSMSPAELRAFYNAIDIFVNPTLR-PQGLDLTLMEAMMS  405 (493)
Q Consensus       347 i~G~g~~--~~~------~~~----------l~~--~V~~~g~~~~~~~~~~~~~adv~v~ps~~-~eg~~~~~~EAm~~  405 (493)
                      +.|.+..  ...      +.+          ..+  +|.|+...+-+-...++++||+.++||.. .|.+|+.-+-+|..
T Consensus       570 f~GKA~P~y~~aK~iIk~i~~va~~in~Dp~~~~~lKVvfl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~N  649 (796)
T 1l5w_A          570 FGAKAAPGYYLAKNIIFAINKVADVINNDPLVGDKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALN  649 (796)
T ss_dssp             EECCCCTTCHHHHHHHHHHHHHHHHHHTCTTTGGGEEEEECSSCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHT
T ss_pred             EEecCChhHHHHHHHHHHHHHHHHHhccccccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHc
Confidence            9998642  111      112          224  79999988878888899999999999971 49999999999999


Q ss_pred             CCcEEecCCCCCccceeee--CcceEEECCCHHHHHHHHH------HHHHcCcHHHHHHHHHHHHHHHHhcCHHHHHHHH
Q 039338          406 GKPVMASRFPSIKGTIVVD--DEFGFMFAPNVESLHKTLE------AAVSEGPMRLAQRGEACRQYAASMFTANKMALAY  477 (493)
Q Consensus       406 G~PvI~s~~~~~~~e~v~~--~~~G~~~~~d~~~l~~~i~------~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~  477 (493)
                      |.+.|++-.|... |+.+.  .+||++|..+++++.+.-.      .+..+.+ .++++..   ..+...|||+.- ..|
T Consensus       650 GaL~iGtLDGanv-Ei~e~vG~~NgF~FG~~~~ev~~l~~~~y~a~~~y~~~~-~~~~vvd---~~~~g~fs~~~~-~~y  723 (796)
T 1l5w_A          650 GALTVGTLDGANV-EIAEKVGEENIFIFGHTVEQVKAILAKGYDPVKWRKKDK-VLDAVLK---ELESGKYSDGDK-HAF  723 (796)
T ss_dssp             TCEEEECSCTTHH-HHHHHHCGGGSEECSCCHHHHHHHHHHCCCHHHHHHHCH-HHHHHHH---HHHHTTTTTTCT-TTT
T ss_pred             CCeeecCcCCeee-ehhhccCCCcEEEecCCHHHHHHHHHcccCHHHHhhcCH-HHHHHHH---HHHcCCCCCCcH-HHH
Confidence            9999988777766 55433  5799999887777663221      2232213 3333333   334566999875 779


Q ss_pred             HHHHHHHhh
Q 039338          478 ERLFLCIKN  486 (493)
Q Consensus       478 ~~~~~~i~~  486 (493)
                      .++|+.+++
T Consensus       724 ~~Ly~~L~~  732 (796)
T 1l5w_A          724 DQMLHSIGK  732 (796)
T ss_dssp             HHHHHHTST
T ss_pred             HHHHHHHhc
Confidence            999999865

>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ...

Probab=99.12  E-value=1e-09  Score=112.64  Aligned_cols=231  Identities=14%  Similarity=0.151  Sum_probs=163.3

Q ss_pred             hhccCCeEEEcChhHHHHHHHH-----hCCCCCcEEEecCCccCCCc----cCCcc------------------------
Q 039338          249 FFNKYAHHVAISDSCGEMLRDV-----YQIPSERVHVILNGINENEY----GVDLS------------------------  295 (493)
Q Consensus       249 ~~~~~d~ii~~S~~~~~~~~~~-----~~~~~~~v~vi~ngvd~~~~----~~~~~------------------------  295 (493)
                      .+..++.|-++|+-..+.+++.     +...++++.-|-|||+...|    .|...                        
T Consensus       434 ai~~S~~VNgVS~lH~e~ik~~~f~~~~~~~p~k~~~iTNGI~~rrWl~~~NP~l~~lI~~~ig~~W~~~~~~l~~L~~y  513 (824)
T 2gj4_A          434 CIAGSHAVNGVARIHSEILKKTIFKDFYELEPHKFQNKTNGITPRRWLVLCNPGLAEIIAERIGEEYISDLDQLRKLLSY  513 (824)
T ss_dssp             HHHTCSCEEESSHHHHHHHHHTTTHHHHHHCGGGEEECCCCBCTCCCCCCTCHHHHHHHHHHHCSGGGGCGGGGGGGGGG
T ss_pred             HHHhcCceeeEcHHHHHHHhhHHhHHHHHcChhhcccccCCcChhhhcccCCHhHHHHHHHhcCchhhhCHHHHHHHHhc
Confidence            3567899999999988887532     22336789999999998888    22100                        


Q ss_pred             ---c-------------chh----hhhhhCCCCC-CcEEEEEecccccccChHHH-HHHHHHHHh--hCC-----CeEEE
Q 039338          296 ---L-------------GQS----FRSRIGIPKN-ASLVLGVAGRLVKDKGHPLL-HEAFSKLMV--KYP-----DVYLI  346 (493)
Q Consensus       296 ---~-------------~~~----~r~~~~i~~~-~~~~i~~~Gr~~~~Kg~~~l-l~a~~~l~~--~~~-----~~~l~  346 (493)
                         .             +..    ++++.|++-+ +.+.++++.|+..+|+.+++ +..+.++.+  ..|     +++++
T Consensus       514 ~~d~~~~~~~~~~K~~nK~~la~~l~~~~Gl~vdpd~l~~g~vkRl~eYKRq~L~~l~~i~~~~~i~~~~~~~~~p~q~I  593 (824)
T 2gj4_A          514 VDDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVM  593 (824)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHCTTSCCCCEEEE
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCcceEeeeecchhhcchhhHHHHHHHHHHHHHhCCCCCCCCEEEE
Confidence               0             011    3344676533 23889999999999999997 788777742  333     57999


Q ss_pred             EEeCCCc-HHH-------Hhhh----------cC--cEEEecCCCHHHHHHHHHHcCEEEeCCCC-CCCCChHHHHHHHc
Q 039338          347 VAGSGPW-EQR-------YKDF----------GH--QVLVMGSMSPAELRAFYNAIDIFVNPTLR-PQGLDLTLMEAMMS  405 (493)
Q Consensus       347 i~G~g~~-~~~-------~~~l----------~~--~V~~~g~~~~~~~~~~~~~adv~v~ps~~-~eg~~~~~~EAm~~  405 (493)
                      +.|.+.. ...       +.++          .+  +|.|+...+-+-...++++||+.++||.. .|.+|+.-+-||..
T Consensus       594 f~GKA~P~y~~aK~iIkli~~va~~in~Dp~v~~~lKVvFl~nYdvslA~~I~~gaDv~l~~S~ag~EAsGTs~MKamlN  673 (824)
T 2gj4_A          594 IGGKAAPGYHMAKMIIKLITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLN  673 (824)
T ss_dssp             EECCCCTTCHHHHHHHHHHHHHHHHHTTCTTTGGGEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHT
T ss_pred             EEEeCCHhHHHHHHHHHHHHHHHHHhccCcccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHc
Confidence            9998642 111       2222          24  79999988878888899999999999971 49999999999999


Q ss_pred             CCcEEecCCCCCccceee--eCcceEEECCCHHHHHHHH-------HHHHHcCcHHHHHHHHHHHHHHHHhcCHHHHHHH
Q 039338          406 GKPVMASRFPSIKGTIVV--DDEFGFMFAPNVESLHKTL-------EAAVSEGPMRLAQRGEACRQYAASMFTANKMALA  476 (493)
Q Consensus       406 G~PvI~s~~~~~~~e~v~--~~~~G~~~~~d~~~l~~~i-------~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~  476 (493)
                      |.+.|++--|... |+.+  ..+||++|...++++ .++       ..+.+. .+.++++.++   .+...|+|..- +.
T Consensus       674 GaLtigtlDGanv-Ei~e~vG~~Ngf~FG~~~~ev-~~l~~~~~~a~~~Y~~-~~~l~~v~d~---i~~g~fs~~~~-~~  746 (824)
T 2gj4_A          674 GALTIGTMDGANV-EMAEEAGEENFFIFGMRVEDV-DRLDQRGYNAQEYYDR-IPELRQIIEQ---LSSGFFSPKQP-DL  746 (824)
T ss_dssp             TCEEEECSCTTHH-HHHHHHCGGGSEECSCCHHHH-HHHHHHCCCHHHHHHH-CHHHHHHHHH---HHHTTTCTTST-TT
T ss_pred             CceEEEEecCccc-hhhhccCCCCEEEeCCcHHHH-HHHHHcCCCHHHHhcC-CHHHHHHHHH---HHhCCCCCCCh-HH
Confidence            9999998776665 5543  467999999766666 443       234444 3344444333   34566999876 77


Q ss_pred             HHHHHHHHhh
Q 039338          477 YERLFLCIKN  486 (493)
Q Consensus       477 ~~~~~~~i~~  486 (493)
                      |..+|+++++
T Consensus       747 y~~ly~~l~~  756 (824)
T 2gj4_A          747 FKDIVNMLMH  756 (824)
T ss_dssp             THHHHHHHHH
T ss_pred             HHHHHHHHHc
Confidence            8888888864

>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae}

Probab=99.08  E-value=7.7e-10  Score=113.07  Aligned_cols=232  Identities=14%  Similarity=0.114  Sum_probs=161.3

Q ss_pred             hhccCCeEEEcChhHHHHHHH-----HhCCCCCcEEEecCCccCCCcc----CC--------------------------
Q 039338          249 FFNKYAHHVAISDSCGEMLRD-----VYQIPSERVHVILNGINENEYG----VD--------------------------  293 (493)
Q Consensus       249 ~~~~~d~ii~~S~~~~~~~~~-----~~~~~~~~v~vi~ngvd~~~~~----~~--------------------------  293 (493)
                      .+..++.|-++|+...+.++.     .+..-+.++.-|-|||+...|-    |.                          
T Consensus       399 ai~~S~~VNgVS~lHae~ik~~~f~~~~~~~p~kf~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~d~~~l~~l~~  478 (796)
T 2c4m_A          399 ACYAAYSINGVAALHTEIIKAETLADWYALWPEKFNNKTNGVTPRRWLRMINPGLSDLLTRLSGSDDWVTDLDELKKLRS  478 (796)
T ss_dssp             HHHHCSEEEESSHHHHHHHHHTTTHHHHHHCGGGEEECCCCBCTCCCCCTTCHHHHHHHHHHHSSSGGGGCGGGGGGGGG
T ss_pred             HHHhcCceeeccHHHHHHhhhhhhhhHHHcCccccccccCCcchHHhhcccCHhHHHHHHHhcCchhhhhChHHHHHHHh
Confidence            355689999999999988874     1233457899999999998882    21                          


Q ss_pred             -ccc--------------chh----hhhhhCCCCC-CcEEEEEecccccccChHH-HHHHHHHHHh--hC-----CCeEE
Q 039338          294 -LSL--------------GQS----FRSRIGIPKN-ASLVLGVAGRLVKDKGHPL-LHEAFSKLMV--KY-----PDVYL  345 (493)
Q Consensus       294 -~~~--------------~~~----~r~~~~i~~~-~~~~i~~~Gr~~~~Kg~~~-ll~a~~~l~~--~~-----~~~~l  345 (493)
                       .++              +..    +++++|++-+ +.+.++++.|+..+|++++ ++..+.++.+  ++     .++++
T Consensus       479 ~~~d~~~~~~l~~~K~~nK~~L~~~l~~~~Gl~vdpd~l~~~~vkRlheYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~  558 (796)
T 2c4m_A          479 YADDKSVLEELRAIKAANKQDFAEWILERQGIEIDPESIFDVQIKRLHEYKRQLMNALYVLDLYFRIKEDGLTDIPARTV  558 (796)
T ss_dssp             GGGCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEECCCCGGGTHHHHHHHHHHHHHHHHTSCCCSSCCEEE
T ss_pred             hCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCcEEEEeecchhhcccCEeHHHHHHHHHHHhhCCCCCCCCeEE
Confidence             000              112    3556676543 2388899999999999999 8888887764  22     36999


Q ss_pred             EEEeCCCc--HHH------Hhh----------hcC--cEEEecCCCHHHHHHHHHHcCEEEeCCCC-CCCCChHHHHHHH
Q 039338          346 IVAGSGPW--EQR------YKD----------FGH--QVLVMGSMSPAELRAFYNAIDIFVNPTLR-PQGLDLTLMEAMM  404 (493)
Q Consensus       346 ~i~G~g~~--~~~------~~~----------l~~--~V~~~g~~~~~~~~~~~~~adv~v~ps~~-~eg~~~~~~EAm~  404 (493)
                      ++.|.+..  ...      +.+          ..+  +|.|+...+-+-...++++||+.++||.. .|.+|+.-+-+|.
T Consensus       559 If~GKA~P~y~~aK~iIk~i~~va~~in~dp~~~~~lKVvFl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~  638 (796)
T 2c4m_A          559 IFGAKAAPGYVRAKAIIKLINSIADLVNNDPEVSPLLKVVFVENYNVSPAEHILPASDVSEQISTAGKEASGTSNMKFMM  638 (796)
T ss_dssp             EEECCCCTTCHHHHHHHHHHHHHHHHHHTCTTTTTTEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCHHHHHHHH
T ss_pred             EEEecCCHhHHHHHHHHHHHHHHHHHhccccccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHH
Confidence            99998642  111      111          225  79999988878888899999999999971 4999999999999


Q ss_pred             cCCcEEecCCCCCccceeee--CcceEEECC---CHHHHHHH--HHHHHHcCcHHHHHHHHHHHHHHHHhcCHHHHHHHH
Q 039338          405 SGKPVMASRFPSIKGTIVVD--DEFGFMFAP---NVESLHKT--LEAAVSEGPMRLAQRGEACRQYAASMFTANKMALAY  477 (493)
Q Consensus       405 ~G~PvI~s~~~~~~~e~v~~--~~~G~~~~~---d~~~l~~~--i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~  477 (493)
                      .|.+.|++-.|... |+.+.  .+||++|..   +++++...  -..+..+.+ .++++..+   .+...|+|+.- ..|
T Consensus       639 NGaL~iGtLDGanv-Ei~e~vG~~NgF~FG~~~~ev~~l~~~y~a~~~y~~~~-~~~~vvd~---~~~g~fs~~~~-~~y  712 (796)
T 2c4m_A          639 NGALTLGTMDGANV-EIVDSVGEENAYIFGARVEELPALRESYKPYELYETVP-GLKRALDA---LDNGTLNDNNS-GLF  712 (796)
T ss_dssp             TTCEEEEESSTHHH-HHHHHHCGGGSEEESCCTTTHHHHHHTCCHHHHHHHST-THHHHHHT---TTSSSSCCTTC-CHH
T ss_pred             cCCeEEeccCCeEe-ehhhhcCCCcEEEecCchhhHHHHHHhhChHHHhhcCH-HHHHHHHH---HHcCCCCCCCH-HHH
Confidence            99999988766666 55433  579999986   44444432  111222212 23333222   23456888776 779


Q ss_pred             HHHHHHHhh
Q 039338          478 ERLFLCIKN  486 (493)
Q Consensus       478 ~~~~~~i~~  486 (493)
                      .++|+.+++
T Consensus       713 ~~Ly~~L~~  721 (796)
T 2c4m_A          713 YDLKHSLIH  721 (796)
T ss_dssp             HHHHHHHHS
T ss_pred             HHHHHHHHh
Confidence            999999874

>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*

Probab=98.92  E-value=5.8e-06  Score=82.22  Aligned_cols=189  Identities=14%  Similarity=0.052  Sum_probs=108.1

Q ss_pred             HhhccCCeEEEcChhHHH-HH----HHHhCCCCCcEEEecCCccCCCccCC-c---ccchhhhhhhCCCCCCcEEEEEec
Q 039338          248 RFFNKYAHHVAISDSCGE-ML----RDVYQIPSERVHVILNGINENEYGVD-L---SLGQSFRSRIGIPKNASLVLGVAG  318 (493)
Q Consensus       248 ~~~~~~d~ii~~S~~~~~-~~----~~~~~~~~~~v~vi~ngvd~~~~~~~-~---~~~~~~r~~~~i~~~~~~~i~~~G  318 (493)
                      ..++.++.+++.|-...+ ..    .+... +..++..|..-.... -... .   .......+.+.-.++++.+++..|
T Consensus       207 ~~~~~~~~~l~nt~~ele~~~~~~l~~~~~-p~~~v~~vGpl~~~~-~~~~~~~~~~~~~~~~~wl~~~~~~~vv~vs~G  284 (463)
T 2acv_A          207 ERFRDTKGIIVNTFSDLEQSSIDALYDHDE-KIPPIYAVGPLLDLK-GQPNPKLDQAQHDLILKWLDEQPDKSVVFLCFG  284 (463)
T ss_dssp             HHHTTSSEEEESCCHHHHHHHHHHHHHHCT-TSCCEEECCCCCCSS-CCCBTTBCHHHHHHHHHHHHTSCTTCEEEEECC
T ss_pred             HhcccCCEEEECCHHHHhHHHHHHHHhccc-cCCcEEEeCCCcccc-cccccccccccchhHHHHHhcCCCCceEEEEec
Confidence            445778888777644333 22    22110 134566665322111 0010 0   111233444444445558888899


Q ss_pred             ccccccChHHHHHHHHHHHhhCCCeEEEE-EeCC--Cc-HHHHhhh--cCcEEEecCCCHHHHHHHHH--HcCEEEeCCC
Q 039338          319 RLVKDKGHPLLHEAFSKLMVKYPDVYLIV-AGSG--PW-EQRYKDF--GHQVLVMGSMSPAELRAFYN--AIDIFVNPTL  390 (493)
Q Consensus       319 r~~~~Kg~~~ll~a~~~l~~~~~~~~l~i-~G~g--~~-~~~~~~l--~~~V~~~g~~~~~~~~~~~~--~adv~v~ps~  390 (493)
                      +....-+.+.+.+++..+.+.  +.++++ +|.+  .. ....+..  .+++.+.+++|+.   ++++  ++|++|.   
T Consensus       285 S~~~~~~~~~~~~~~~~l~~~--~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~v~~w~pq~---~vL~h~~~~~fvt---  356 (463)
T 2acv_A          285 SMGVSFGPSQIREIALGLKHS--GVRFLWSNSAEKKVFPEGFLEWMELEGKGMICGWAPQV---EVLAHKAIGGFVS---  356 (463)
T ss_dssp             SSCCCCCHHHHHHHHHHHHHH--TCEEEEECCCCGGGSCTTHHHHHHHHCSEEEESSCCHH---HHHHSTTEEEEEE---
T ss_pred             cccccCCHHHHHHHHHHHHhC--CCcEEEEECCCcccCChhHHHhhccCCCEEEEccCCHH---HHhCCCccCeEEe---
Confidence            887322334444444444433  355554 4543  11 1222233  5789999999865   4576  6778884   


Q ss_pred             CCCCCChHHHHHHHcCCcEEecCCCCCcc---ce-eeeCcceEEE-C-------C-CHHHHHHHHHHHHHc
Q 039338          391 RPQGLDLTLMEAMMSGKPVMASRFPSIKG---TI-VVDDEFGFMF-A-------P-NVESLHKTLEAAVSE  448 (493)
Q Consensus       391 ~~eg~~~~~~EAm~~G~PvI~s~~~~~~~---e~-v~~~~~G~~~-~-------~-d~~~l~~~i~~ll~~  448 (493)
                      +  |-.++++||+++|+|+|+....+-..   .. ++.-+.|+.+ .       . +.+++.++|.+++++
T Consensus       357 h--~G~~s~~Eal~~GvP~i~~P~~~dQ~~Na~~lv~~~g~g~~l~~~~~~~~~~~~~~~l~~ai~~ll~~  425 (463)
T 2acv_A          357 H--CGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDK  425 (463)
T ss_dssp             C--CCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTSCCEEESCSSCCTTCCCCCHHHHHHHHHHHTCT
T ss_pred             c--CCchhHHHHHHcCCCeeeccchhhhHHHHHHHHHHcCeEEEEecccCCCCccccHHHHHHHHHHHHhc
Confidence            3  33579999999999999987633210   23 4567788888 2       4 789999999999964

>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10

Probab=98.87  E-value=1e-06  Score=88.19  Aligned_cols=146  Identities=14%  Similarity=0.114  Sum_probs=94.2

Q ss_pred             CCCcEEEEEecccccccChHHHHHHHHHHHhhCCCeEEEEE-eCCC-------c-HHHHhhhcCcEEEecCCCHHHHHHH
Q 039338          308 KNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVA-GSGP-------W-EQRYKDFGHQVLVMGSMSPAELRAF  378 (493)
Q Consensus       308 ~~~~~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~-G~g~-------~-~~~~~~l~~~V~~~g~~~~~~~~~~  378 (493)
                      ++++.+++..|+... ...+.+.+.+..+.+.  +.+++++ |...       . ....+...+++.+.+++|+.   ++
T Consensus       293 ~~~~vv~vs~GS~~~-~~~~~~~~~~~~l~~~--~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~~~pq~---~~  366 (482)
T 2pq6_A          293 EPGSVVYVNFGSTTV-MTPEQLLEFAWGLANC--KKSFLWIIRPDLVIGGSVIFSSEFTNEIADRGLIASWCPQD---KV  366 (482)
T ss_dssp             CTTCEEEEECCSSSC-CCHHHHHHHHHHHHHT--TCEEEEECCGGGSTTTGGGSCHHHHHHHTTTEEEESCCCHH---HH
T ss_pred             CCCceEEEecCCccc-CCHHHHHHHHHHHHhc--CCcEEEEEcCCccccccccCcHhHHHhcCCCEEEEeecCHH---HH
Confidence            344578888898753 2334444444444432  4565554 4321       1 22233456899999999865   47


Q ss_pred             HHHcCE--EEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCcc---ceee-eCcceEEECC--CHHHHHHHHHHHHHcCc
Q 039338          379 YNAIDI--FVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKG---TIVV-DDEFGFMFAP--NVESLHKTLEAAVSEGP  450 (493)
Q Consensus       379 ~~~adv--~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~---e~v~-~~~~G~~~~~--d~~~l~~~i~~ll~~~~  450 (493)
                      ++.+++  +|  + + .| .++++||+++|+|+|+....+-..   ..+. +-+.|+.++.  +.+++.++|.+++++ +
T Consensus       367 L~h~~~~~~v--t-h-~G-~~s~~Eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~~~~~~~~l~~~i~~ll~~-~  440 (482)
T 2pq6_A          367 LNHPSIGGFL--T-H-CG-WNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEIDTNVKREELAKLINEVIAG-D  440 (482)
T ss_dssp             HTSTTEEEEE--E-C-CC-HHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECCSSCCHHHHHHHHHHHHTS-H
T ss_pred             hcCCCCCEEE--e-c-CC-cchHHHHHHcCCCEEecCcccchHHHHHHHHHHhCEEEEECCCCCHHHHHHHHHHHHcC-C
Confidence            877666  55  3 2 33 569999999999999997643210   1233 5678888864  899999999999988 5


Q ss_pred             HHHHHHHHHHHHHHHH
Q 039338          451 MRLAQRGEACRQYAAS  466 (493)
Q Consensus       451 ~~~~~~~~~~~~~~~~  466 (493)
                      + .+++++++++..+.
T Consensus       441 ~-~~~~r~~a~~l~~~  455 (482)
T 2pq6_A          441 K-GKKMKQKAMELKKK  455 (482)
T ss_dssp             H-HHHHHHHHHHHHHH
T ss_pred             c-HHHHHHHHHHHHHH
Confidence            4 35666666665544

>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*

Probab=98.73  E-value=6.5e-05  Score=74.95  Aligned_cols=131  Identities=12%  Similarity=-0.032  Sum_probs=80.7

Q ss_pred             CCcEEEEEecccccccChHHHHHHHHHHHhhCCCeEEEEE-eCCCc-----------HHHH-hhhcCc---------EEE
Q 039338          309 NASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVA-GSGPW-----------EQRY-KDFGHQ---------VLV  366 (493)
Q Consensus       309 ~~~~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~-G~g~~-----------~~~~-~~l~~~---------V~~  366 (493)
                      +++.+++..|+... ...+.+.+.+..+.+.  +.+++++ |.+..           ...+ ..+.++         +.+
T Consensus       267 ~~~vvyvs~GS~~~-~~~~~~~~~~~al~~~--~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v  343 (480)
T 2vch_A          267 LGSVLYVSFGSGGT-LTCEQLNELALGLADS--EQRFLWVIRSPSGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVI  343 (480)
T ss_dssp             TTCEEEEECTTTCC-CCHHHHHHHHHHHHHT--TCEEEEEECCCCSSTTTTTTCC--CSCGGGGSCTTHHHHTTTTEEEE
T ss_pred             CCceEEEecccccC-CCHHHHHHHHHHHHhc--CCcEEEEECCccccccccccccccccchhhhcCHHHHHHhCCCeEEE
Confidence            44578889999863 2345555555555443  4555544 43210           0111 123333         456


Q ss_pred             ecCCCHHHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCcc---ce-eeeCcceEEEC-----C-CHH
Q 039338          367 MGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKG---TI-VVDDEFGFMFA-----P-NVE  436 (493)
Q Consensus       367 ~g~~~~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~---e~-v~~~~~G~~~~-----~-d~~  436 (493)
                      .+++|+.   ++++.+++.++-+ + .| -++++||+++|+|+|+-...+-..   .. ++.-+.|+.++     . +.+
T Consensus       344 ~~w~Pq~---~vL~h~~v~~fvt-H-gG-~~S~~Eal~~GvP~i~~P~~~DQ~~na~~l~~~~G~g~~l~~~~~~~~~~~  417 (480)
T 2vch_A          344 PFWAPQA---QVLAHPSTGGFLT-H-CG-WNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGDDGLVRRE  417 (480)
T ss_dssp             ESCCCHH---HHHHSTTEEEEEE-C-CC-HHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEECCCCCTTSCCCHH
T ss_pred             eCccCHH---HHhCCCCcCeEEe-c-cc-chhHHHHHHcCCCEEeccccccchHHHHHHHHHhCeEEEeecccCCccCHH
Confidence            6799864   7889899644434 2 34 469999999999999987643110   12 34566777664     3 789


Q ss_pred             HHHHHHHHHHHc
Q 039338          437 SLHKTLEAAVSE  448 (493)
Q Consensus       437 ~l~~~i~~ll~~  448 (493)
                      ++.++|.+++.+
T Consensus       418 ~l~~av~~vl~~  429 (480)
T 2vch_A          418 EVARVVKGLMEG  429 (480)
T ss_dssp             HHHHHHHHHHTS
T ss_pred             HHHHHHHHHhcC
Confidence            999999999984

>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*

Probab=98.73  E-value=1.1e-05  Score=79.51  Aligned_cols=204  Identities=13%  Similarity=0.027  Sum_probs=117.4

Q ss_pred             HhhccCCeEEEcChhHHHH-HHHHh-CCCCCcEEEecCCccCCCccCCcccchhhhhhhCCCCCCcEEEEEecccccccC
Q 039338          248 RFFNKYAHHVAISDSCGEM-LRDVY-QIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVAGRLVKDKG  325 (493)
Q Consensus       248 ~~~~~~d~ii~~S~~~~~~-~~~~~-~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Gr~~~~Kg  325 (493)
                      ..+.+++.+++.|-...+. ..+.+ .. ..++..|..-..... ...........+.++-.++++.+++..|+.... .
T Consensus       211 ~~~~~~~~vl~ns~~eLE~~~~~~~~~~-~~~v~~vGPl~~~~~-~~~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~-~  287 (454)
T 3hbf_A          211 LELPRANAVAINSFATIHPLIENELNSK-FKLLLNVGPFNLTTP-QRKVSDEHGCLEWLDQHENSSVVYISFGSVVTP-P  287 (454)
T ss_dssp             HHGGGSSCEEESSCGGGCHHHHHHHHTT-SSCEEECCCHHHHSC-CSCCCCTTCHHHHHHTSCTTCEEEEECCSSCCC-C
T ss_pred             HhhccCCEEEECChhHhCHHHHHHHHhc-CCCEEEECCcccccc-cccccchHHHHHHHhcCCCCceEEEecCCCCcC-C
Confidence            4567899999998765442 11111 11 135555543221100 000111223444554444556788889988642 2


Q ss_pred             hHHHHHHHHHHHhhCCCeEEEE-EeCCCc----HHHHhhhcCcEEEecCCCHHHHHHHHHHcCEEEeCCCCCCCCChHHH
Q 039338          326 HPLLHEAFSKLMVKYPDVYLIV-AGSGPW----EQRYKDFGHQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLM  400 (493)
Q Consensus       326 ~~~ll~a~~~l~~~~~~~~l~i-~G~g~~----~~~~~~l~~~V~~~g~~~~~~~~~~~~~adv~v~ps~~~eg~~~~~~  400 (493)
                      .+.+.+.+..+.+.  +.++++ +|.+..    ....++..+++.+.+++|+.   .+++.+++.++-+ + .| .++++
T Consensus       288 ~~~~~el~~~l~~~--~~~flw~~~~~~~~~lp~~~~~~~~~~~~vv~w~Pq~---~vL~h~~v~~fvt-H-~G-~~S~~  359 (454)
T 3hbf_A          288 PHELTALAESLEEC--GFPFIWSFRGDPKEKLPKGFLERTKTKGKIVAWAPQV---EILKHSSVGVFLT-H-SG-WNSVL  359 (454)
T ss_dssp             HHHHHHHHHHHHHH--CCCEEEECCSCHHHHSCTTHHHHTTTTEEEESSCCHH---HHHHSTTEEEEEE-C-CC-HHHHH
T ss_pred             HHHHHHHHHHHHhC--CCeEEEEeCCcchhcCCHhHHhhcCCceEEEeeCCHH---HHHhhcCcCeEEe-c-CC-cchHH
Confidence            34444444445443  344444 443221    11223345789999999864   7788899544434 3 34 46999


Q ss_pred             HHHHcCCcEEecCCCCCcc---ceeeeC-cceEEECC---CHHHHHHHHHHHHHcCcHHHHHHHHHHHHHH
Q 039338          401 EAMMSGKPVMASRFPSIKG---TIVVDD-EFGFMFAP---NVESLHKTLEAAVSEGPMRLAQRGEACRQYA  464 (493)
Q Consensus       401 EAm~~G~PvI~s~~~~~~~---e~v~~~-~~G~~~~~---d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~  464 (493)
                      ||+++|+|+|+-...+-..   ..+++. +.|+.++.   +.+++.++|.+++++ + ..+++++++++..
T Consensus       360 Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~g~Gv~l~~~~~~~~~l~~av~~ll~~-~-~~~~~r~~a~~l~  428 (454)
T 3hbf_A          360 ECIVGGVPMISRPFFGDQGLNTILTESVLEIGVGVDNGVLTKESIKKALELTMSS-E-KGGIMRQKIVKLK  428 (454)
T ss_dssp             HHHHHTCCEEECCCSTTHHHHHHHHHTTSCSEEECGGGSCCHHHHHHHHHHHHSS-H-HHHHHHHHHHHHH
T ss_pred             HHHHcCCCEecCcccccHHHHHHHHHHhhCeeEEecCCCCCHHHHHHHHHHHHCC-C-hHHHHHHHHHHHH
Confidence            9999999999987533110   234453 78888764   789999999999976 3 3345555555543

>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7

Probab=98.70  E-value=7.2e-07  Score=85.44  Aligned_cols=108  Identities=12%  Similarity=0.091  Sum_probs=78.6

Q ss_pred             chhhhhhhCCCCCCcEEEEEecc-cccccChH--HHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhhhc--------Cc-E
Q 039338          297 GQSFRSRIGIPKNASLVLGVAGR-LVKDKGHP--LLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDFG--------HQ-V  364 (493)
Q Consensus       297 ~~~~r~~~~i~~~~~~~i~~~Gr-~~~~Kg~~--~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~l~--------~~-V  364 (493)
                      .+.+++.+|++.+++++++..|. ..+.|.+.  .+.+++..|.++  ++++++.|...+.+..+++.        .+ +
T Consensus       167 ~~~~~~~~~~~~~~~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~--~~~vvl~g~~~e~~~~~~i~~~~~~~~~~~~~  244 (348)
T 1psw_A          167 KSYTCNQFSLSSERPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDE--GYQVVLFGSAKDHEAGNEILAALNTEQQAWCR  244 (348)
T ss_dssp             HHHHHHHTTCCSSSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHT--TCEEEECCCGGGHHHHHHHHTTSCHHHHTTEE
T ss_pred             HHHHHHHhCCCCCCcEEEEECCCCccccCCCCHHHHHHHHHHHHHC--CCeEEEEeChhhHHHHHHHHHhhhhccccceE
Confidence            34566778887566677778887 55666654  888888888765  68899998766655444432        13 4


Q ss_pred             EEecCCCHHHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcCCcEEec
Q 039338          365 LVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMAS  412 (493)
Q Consensus       365 ~~~g~~~~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s  412 (493)
                      .+.|..+-.++.++++.||++|...    + | .+-.|.++|+|+|+-
T Consensus       245 ~l~g~~sl~e~~ali~~a~l~I~~D----s-g-~~HlAaa~g~P~v~l  286 (348)
T 1psw_A          245 NLAGETQLDQAVILIAACKAIVTND----S-G-LMHVAAALNRPLVAL  286 (348)
T ss_dssp             ECTTTSCHHHHHHHHHTSSEEEEES----S-H-HHHHHHHTTCCEEEE
T ss_pred             eccCcCCHHHHHHHHHhCCEEEecC----C-H-HHHHHHHcCCCEEEE
Confidence            6778888899999999999999643    2 2 333399999999985

>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*

Probab=98.69  E-value=7.5e-06  Score=81.19  Aligned_cols=200  Identities=15%  Similarity=0.030  Sum_probs=116.6

Q ss_pred             hhccCCeEEEcChhHHHH-----HHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCCCCCCcEEEEEecccccc
Q 039338          249 FFNKYAHHVAISDSCGEM-----LRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLGVAGRLVKD  323 (493)
Q Consensus       249 ~~~~~d~ii~~S~~~~~~-----~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~~~Gr~~~~  323 (493)
                      ..++++.+++.|....+.     ++..+    .++..|..-..... ...........+.++..++++.+++..|+....
T Consensus       210 ~~~~~~~vl~ns~~~le~~~~~~~~~~~----~~~~~vGpl~~~~~-~~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~  284 (456)
T 2c1x_A          210 VLPKATAVFINSFEELDDSLTNDLKSKL----KTYLNIGPFNLITP-PPVVPNTTGCLQWLKERKPTSVVYISFGTVTTP  284 (456)
T ss_dssp             HGGGSSCEEESSCGGGCHHHHHHHHHHS----SCEEECCCHHHHC----------CHHHHHHTSCTTCEEEEECCSSCCC
T ss_pred             hhhhCCEEEECChHHHhHHHHHHHHhcC----CCEEEecCcccCcc-cccccchhhHHHHHhcCCCcceEEEecCccccC
Confidence            356789999988655443     24422    25555543211000 000000112334444344555888889988643


Q ss_pred             cChHHHHHHHHHHHhhCCCeEE-EEEeCCCc----HHHHhhhcCcEEEecCCCHHHHHHHHH--HcCEEEeCCCCCCCCC
Q 039338          324 KGHPLLHEAFSKLMVKYPDVYL-IVAGSGPW----EQRYKDFGHQVLVMGSMSPAELRAFYN--AIDIFVNPTLRPQGLD  396 (493)
Q Consensus       324 Kg~~~ll~a~~~l~~~~~~~~l-~i~G~g~~----~~~~~~l~~~V~~~g~~~~~~~~~~~~--~adv~v~ps~~~eg~~  396 (493)
                       ..+.+.+.+..+.+.  +.++ +.+|....    ....+...+++.+.+++|+.   ++++  ++|++|.   + .| .
T Consensus       285 -~~~~~~~~~~~l~~~--~~~~lw~~~~~~~~~l~~~~~~~~~~~~~v~~w~pq~---~vL~h~~~~~fvt---h-~G-~  353 (456)
T 2c1x_A          285 -PPAEVVALSEALEAS--RVPFIWSLRDKARVHLPEGFLEKTRGYGMVVPWAPQA---EVLAHEAVGAFVT---H-CG-W  353 (456)
T ss_dssp             -CHHHHHHHHHHHHHH--TCCEEEECCGGGGGGSCTTHHHHHTTTEEEESCCCHH---HHHTSTTEEEEEE---C-CC-H
T ss_pred             -CHHHHHHHHHHHHhc--CCeEEEEECCcchhhCCHHHHhhcCCceEEecCCCHH---HHhcCCcCCEEEe---c-CC-c
Confidence             234444444444433  3344 44554321    11223345789999999864   5688  6788884   3 33 5


Q ss_pred             hHHHHHHHcCCcEEecCCCCCcc---ceeeeC-cceEEECC---CHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHH
Q 039338          397 LTLMEAMMSGKPVMASRFPSIKG---TIVVDD-EFGFMFAP---NVESLHKTLEAAVSEGPMRLAQRGEACRQYAAS  466 (493)
Q Consensus       397 ~~~~EAm~~G~PvI~s~~~~~~~---e~v~~~-~~G~~~~~---d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~  466 (493)
                      ++++||+++|+|+|+....+-..   ..+.+. +.|+.++.   +.+++.++|.+++++ ++ .+++++++++..+.
T Consensus       354 ~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~~~g~g~~l~~~~~~~~~l~~~i~~ll~~-~~-~~~~r~~a~~l~~~  428 (456)
T 2c1x_A          354 NSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIEGGVFTKSGLMSCFDQILSQ-EK-GKKLRENLRALRET  428 (456)
T ss_dssp             HHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECGGGSCCHHHHHHHHHHHHHS-HH-HHHHHHHHHHHHHH
T ss_pred             chHHHHHHhCceEEecCChhhHHHHHHHHHHHhCeEEEecCCCcCHHHHHHHHHHHHCC-Cc-HHHHHHHHHHHHHH
Confidence            69999999999999987543110   245555 78888863   789999999999988 54 45666666655443

>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*

Probab=98.61  E-value=2.6e-07  Score=84.84  Aligned_cols=240  Identities=11%  Similarity=0.059  Sum_probs=130.1

Q ss_pred             eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCCCcccc
Q 039338           84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEADKWRY  163 (493)
Q Consensus        84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (493)
                      |||+|.+..-+.  ...|.-.++..||++|.    +|.+++.....   ...+.        .+.+ +.....       
T Consensus         1 mki~ir~Da~~~--IG~GHvmRcl~LA~~l~----~v~F~~~~~~~---~~~~~--------~g~~-v~~l~~-------   55 (282)
T 3hbm_A            1 MKVLFRSDSSSQ--IGFGHIKRDLVLAKQYS----DVSFACLPLEG---SLIDE--------IPYP-VYELSS-------   55 (282)
T ss_dssp             CCEEEEECCBTT--TBSHHHHHHHHHHTTCS----SEEEEECCCTT---CCGGG--------CCSC-EEECSS-------
T ss_pred             CEEEEEEecCCC--ccccHHHHHHHHHHHHH----hCEEEEecCcH---hHHHH--------CCCe-EEEcCc-------
Confidence            899999996543  55677778888888887    78888755332   11111        1111 111111       


Q ss_pred             ccchHHHHHHhcCCCCcEEEeCccchhHHhh----hc-cCcEEEEeccchhhhhhhhhhhhhhcCCCCccchHhHhHHHH
Q 039338          164 SKGWEQFDEENQREPFDVVHSESVALPHWLA----RN-VTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQG  238 (493)
Q Consensus       164 ~~~~~~~~~~~~~~~~DiI~~~~~~~~~~~~----~~-~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (493)
                       .....+...+++.++|+|++.++.+.....    .. .. .+..+-|..                              
T Consensus        56 -~d~~~~~~~l~~~~~d~lIvD~Y~~~~~~~~~lk~~~~~-~i~~iDD~~------------------------------  103 (282)
T 3hbm_A           56 -ESIYELINLIKEEKFELLIIDHYGISVDDEKLIKLETGV-KILSFDDEI------------------------------  103 (282)
T ss_dssp             -SCHHHHHHHHHHHTCSEEEEECTTCCHHHHHHHHHHHCC-EEEEECSSC------------------------------
T ss_pred             -cCHHHHHHHHHhCCCCEEEEECCCCCHHHHHHHHHhcCc-EEEEEecCC------------------------------
Confidence             122445555556689999987764333221    11 12 344454421                              


Q ss_pred             HHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhC--CCCCcEEEecCCccCCCccCCcccchhhhhhh-CCCCCCcEEEE
Q 039338          239 VMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQ--IPSERVHVILNGINENEYGVDLSLGQSFRSRI-GIPKNASLVLG  315 (493)
Q Consensus       239 ~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~--~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~-~i~~~~~~~i~  315 (493)
                               + -..||.++-.+.....   ..|.  +|.......  |.+....   .   +++.+.- ...++.+.+++
T Consensus       104 ---------~-~~~~Dllin~~~~~~~---~~Y~~~~p~~~~~l~--G~~Y~~l---R---~eF~~~~~~~r~~~~~ILv  162 (282)
T 3hbm_A          104 ---------K-PHHCDILLNVNAYAKA---SDYEGLVPFKCEVRC--GFSYALI---R---EEFYQEAKENRKKKYDFFI  162 (282)
T ss_dssp             ---------C-CCCCSEEEECSTTCCG---GGGTTTCC-CCEEEE--SGGGCCC---C---HHHHHHTTCCCCCCEEEEE
T ss_pred             ---------C-cccCCEEEeCCcccch---hhccccCCCCCeEee--CCccccc---C---HHHHHhhhhccccCCeEEE
Confidence                     0 1246777766543321   1131  232222233  3321111   1   1111110 01223345667


Q ss_pred             EecccccccChHHHHHHHHHHHhhCCCeEEEEEeCCC-cHHHHhhh---cCcEEEecCCCHHHHHHHHHHcCEEEeCCCC
Q 039338          316 VAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGP-WEQRYKDF---GHQVLVMGSMSPAELRAFYNAIDIFVNPTLR  391 (493)
Q Consensus       316 ~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~-~~~~~~~l---~~~V~~~g~~~~~~~~~~~~~adv~v~ps~~  391 (493)
                      ++|..+...-...++++   +.+. ..+ .++.|.+. ..+.+++.   ..++.+.+++  +++.++|++||++|.+   
T Consensus       163 ~~GG~d~~~l~~~vl~~---L~~~-~~i-~vv~G~~~~~~~~l~~~~~~~~~v~v~~~~--~~m~~~m~~aDlvI~~---  232 (282)
T 3hbm_A          163 CMGGTDIKNLSLQIASE---LPKT-KII-SIATSSSNPNLKKLQKFAKLHNNIRLFIDH--ENIAKLMNESNKLIIS---  232 (282)
T ss_dssp             ECCSCCTTCHHHHHHHH---SCTT-SCE-EEEECTTCTTHHHHHHHHHTCSSEEEEESC--SCHHHHHHTEEEEEEE---
T ss_pred             EECCCchhhHHHHHHHH---hhcC-CCE-EEEECCCchHHHHHHHHHhhCCCEEEEeCH--HHHHHHHHHCCEEEEC---
Confidence            88876544333344444   3332 233 45667653 34444432   2589999998  6999999999999972   


Q ss_pred             CCCCChHHHHHHHcCCcEEecCC
Q 039338          392 PQGLDLTLMEAMMSGKPVMASRF  414 (493)
Q Consensus       392 ~eg~~~~~~EAm~~G~PvI~s~~  414 (493)
                       .  |.|+.|++++|+|.|....
T Consensus       233 -g--G~T~~E~~~~g~P~i~ip~  252 (282)
T 3hbm_A          233 -A--SSLVNEALLLKANFKAICY  252 (282)
T ss_dssp             -S--SHHHHHHHHTTCCEEEECC
T ss_pred             -C--cHHHHHHHHcCCCEEEEeC
Confidence             2  4799999999999998754

>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*

Probab=98.38  E-value=1.9e-05  Score=83.27  Aligned_cols=186  Identities=12%  Similarity=0.156  Sum_probs=113.7

Q ss_pred             hccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccC--CcccchhhhhhhCCCCCCcEEEEEeccccccc---
Q 039338          250 FNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGV--DLSLGQSFRSRIGIPKNASLVLGVAGRLVKDK---  324 (493)
Q Consensus       250 ~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~--~~~~~~~~r~~~~i~~~~~~~i~~~Gr~~~~K---  324 (493)
                      ..+.|.+++.|+...+.+.+.++++..++.....+-....+..  .......++++++++.++ .+|+|+-.+....   
T Consensus       476 ~~~~D~~~~~s~~~~~~~~~~f~~~~~~i~~~G~PR~D~l~~~~~~~~~~~~~~~~~~~~~~k-k~ILyaPT~r~~~~~~  554 (729)
T 3l7i_A          476 TSRWDYLISPNRYSTEIFRSAFWMDEERILEIGYPRNDVLVNRANDQEYLDEIRTHLNLPSDK-KVIMYAPTWRDDEFVS  554 (729)
T ss_dssp             HTTCSEEEESSHHHHHHHHHHTCCCGGGEEESCCGGGHHHHHSTTCHHHHHHHHHHTTCCSSC-EEEEECCCCCGGGCCG
T ss_pred             hccCCEEEeCCHHHHHHHHHHhCCCcceEEEcCCCchHHHhcccchHHHHHHHHHHhCCCCCC-eEEEEeeeeeCCcccc
Confidence            5678999999999999999988887666655544322222211  122345688899998877 6677998776531   


Q ss_pred             -C-----hHHHHHHHHHHHhhCCCeEEEEEeCCCcHHH--HhhhcCcEEEecCCCHHHHHHHHHHcCEEEeCCCCCCCCC
Q 039338          325 -G-----HPLLHEAFSKLMVKYPDVYLIVAGSGPWEQR--YKDFGHQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLD  396 (493)
Q Consensus       325 -g-----~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~--~~~l~~~V~~~g~~~~~~~~~~~~~adv~v~ps~~~eg~~  396 (493)
                       |     ...-++.+.+...  .+..+++-......+.  .....+.+......  .++.+++..||++|.      -++
T Consensus       555 ~~~~~~~~~~~~~~l~~~l~--~~~~li~r~Hp~~~~~~~~~~~~~~~~~~~~~--~di~~ll~~aD~lIT------DyS  624 (729)
T 3l7i_A          555 KGKYLFELKIDLDNLYKELG--DDYVILLRMHYLISNALDLSGYENFAIDVSNY--NDVSELFLISDCLIT------DYS  624 (729)
T ss_dssp             GGSSCCCCTTCHHHHHHHHT--TTEEEEECCCHHHHTTCCCTTCTTTEEECTTC--SCHHHHHHTCSEEEE------SSC
T ss_pred             ccccccchhhHHHHHHHHcC--CCeEEEEecCcchhccccccccCCcEEeCCCC--cCHHHHHHHhCEEEe------ech
Confidence             1     1112333333222  4677776553211111  11122444444433  589999999999994      245


Q ss_pred             hHHHHHHHcCCcEEecCCC---------CCccceeeeCcceEEECCCHHHHHHHHHHHHHc
Q 039338          397 LTLMEAMMSGKPVMASRFP---------SIKGTIVVDDEFGFMFAPNVESLHKTLEAAVSE  448 (493)
Q Consensus       397 ~~~~EAm~~G~PvI~s~~~---------~~~~e~v~~~~~G~~~~~d~~~l~~~i~~ll~~  448 (493)
                      .+++|++..++|||.....         |.--+ ..+...|-++. +.++|.++|.+....
T Consensus       625 Sv~fD~~~l~kPiif~~~D~~~Y~~~~rg~y~d-~~~~~pg~~~~-~~~eL~~~i~~~~~~  683 (729)
T 3l7i_A          625 SVMFDYGILKRPQFFFAYDIDKYDKGLRGFYMN-YMEDLPGPIYT-EPYGLAKELKNLDKV  683 (729)
T ss_dssp             THHHHHGGGCCCEEEECTTTTTTTSSCCSBSSC-TTSSSSSCEES-SHHHHHHHHTTHHHH
T ss_pred             HHHHhHHhhCCCEEEecCCHHHHhhccCCcccC-hhHhCCCCeEC-CHHHHHHHHhhhhcc
Confidence            6999999999999987321         11101 11223344444 889999999988764

>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}

Probab=98.13  E-value=0.00012  Score=69.86  Aligned_cols=106  Identities=14%  Similarity=0.126  Sum_probs=77.3

Q ss_pred             hhhhhCCCCCCcEEEEEecccccccCh--HHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhhhc-----CcEEEecCCCH
Q 039338          300 FRSRIGIPKNASLVLGVAGRLVKDKGH--PLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDFG-----HQVLVMGSMSP  372 (493)
Q Consensus       300 ~r~~~~i~~~~~~~i~~~Gr~~~~Kg~--~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~l~-----~~V~~~g~~~~  372 (493)
                      +..+.|++.+++++++..|.-.+.|.+  +.+.+++..+.++  +.+++++|...+.+..+++.     ..+.+.|..+-
T Consensus       175 ~l~~~g~~~~~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~--g~~vvl~g~~~e~~~~~~i~~~~~~~~~~l~g~~sl  252 (349)
T 3tov_A          175 FYSSHGLTDTDILIGFNIGSAVPEKRWPAERFAHVADYFGRL--GYKTVFFGGPMDLEMVQPVVEQMETKPIVATGKFQL  252 (349)
T ss_dssp             HHHHTTCCTTCCEEEEECCCSSGGGCCCHHHHHHHHHHHHHH--TCEEEECCCTTTHHHHHHHHHTCSSCCEECTTCCCH
T ss_pred             HHHHcCCCCCCCEEEEeCCCCCccCCCCHHHHHHHHHHHHhC--CCeEEEEeCcchHHHHHHHHHhcccccEEeeCCCCH
Confidence            344567776666777777765556664  5788888888776  56788888766666555442     34677888898


Q ss_pred             HHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcCCcEEecC
Q 039338          373 AELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASR  413 (493)
Q Consensus       373 ~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~  413 (493)
                      .++..+++.||++|..    ++ |..-+ |.++|+|+|+-=
T Consensus       253 ~e~~ali~~a~~~i~~----Ds-G~~Hl-Aaa~g~P~v~lf  287 (349)
T 3tov_A          253 GPLAAAMNRCNLLITN----DS-GPMHV-GISQGVPIVALY  287 (349)
T ss_dssp             HHHHHHHHTCSEEEEE----SS-HHHHH-HHTTTCCEEEEC
T ss_pred             HHHHHHHHhCCEEEEC----CC-CHHHH-HHhcCCCEEEEE
Confidence            9999999999999963    23 33444 899999999864

>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*

Probab=97.80  E-value=0.0014  Score=61.71  Aligned_cols=130  Identities=15%  Similarity=0.157  Sum_probs=81.5

Q ss_pred             CcEEEEEecccccccCh--HHHHHHHHHHHhhCCCeEEEEE-eCCCcHHHHhhhc---CcEEEecCCCHHHHHHHHHHcC
Q 039338          310 ASLVLGVAGRLVKDKGH--PLLHEAFSKLMVKYPDVYLIVA-GSGPWEQRYKDFG---HQVLVMGSMSPAELRAFYNAID  383 (493)
Q Consensus       310 ~~~~i~~~Gr~~~~Kg~--~~ll~a~~~l~~~~~~~~l~i~-G~g~~~~~~~~l~---~~V~~~g~~~~~~~~~~~~~ad  383 (493)
                      ++++++..|.-.+.|.+  +.+.+++..+.++  ++++++. |...+.+..+++.   +++.+.|..+-.++.++++.||
T Consensus       178 ~~~i~l~pga~~~~k~wp~~~~~~l~~~L~~~--~~~vvl~~g~~~e~~~~~~i~~~~~~~~l~g~~sl~el~ali~~a~  255 (326)
T 2gt1_A          178 GEYAVFLHATTRDDKHWPEEHWRELIGLLADS--GIRIKLPWGAPHEEERAKRLAEGFAYVEVLPKMSLEGVARVLAGAK  255 (326)
T ss_dssp             TSEEEEECCCSSGGGSCCHHHHHHHHHHTTTT--CCEEEECCSSHHHHHHHHHHHTTCTTEEECCCCCHHHHHHHHHTCS
T ss_pred             CCEEEEEeCCCCccccCCHHHHHHHHHHHHHC--CCcEEEecCCHHHHHHHHHHHhhCCcccccCCCCHHHHHHHHHhCC
Confidence            34666677765556664  4778888887653  6788887 5333333344432   4677889989999999999999


Q ss_pred             EEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCcc--------ceeeeCcceEEECC-CHHHHHHHHHHHHHc
Q 039338          384 IFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKG--------TIVVDDEFGFMFAP-NVESLHKTLEAAVSE  448 (493)
Q Consensus       384 v~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~--------e~v~~~~~G~~~~~-d~~~l~~~i~~ll~~  448 (493)
                      ++|..    ++ |..=+ |.++|+|+|+--.+..+.        ..+..+... .... ++++..+++.++++.
T Consensus       256 l~I~~----DS-G~~Hl-Aaa~g~P~v~lfg~t~p~~~~P~~~~~~~~~~~~~-cm~~I~~~~V~~~i~~~l~~  322 (326)
T 2gt1_A          256 FVVSV----DT-GLSHL-TAALDRPNITVYGPTDPGLIGGYGKNQMVCRAPGN-ELSQLTANAVKQFIEENAEK  322 (326)
T ss_dssp             EEEEE----SS-HHHHH-HHHTTCCEEEEESSSCHHHHCCCSSSEEEEECGGG-CGGGCCHHHHHHHHHHTTTT
T ss_pred             EEEec----CC-cHHHH-HHHcCCCEEEEECCCChhhcCCCCCCceEecCCcc-cccCCCHHHHHHHHHHHHHH
Confidence            99963    23 33444 777999999862111110        111111111 1223 788888888887765

>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A

Probab=97.72  E-value=6.7e-05  Score=65.88  Aligned_cols=130  Identities=12%  Similarity=0.087  Sum_probs=79.7

Q ss_pred             CCCCCCcEEEEEecccccccChHHHHHHH------HHHHhhCCCeEEEE-EeCCCc---HHHHhhh--------------
Q 039338          305 GIPKNASLVLGVAGRLVKDKGHPLLHEAF------SKLMVKYPDVYLIV-AGSGPW---EQRYKDF--------------  360 (493)
Q Consensus       305 ~i~~~~~~~i~~~Gr~~~~Kg~~~ll~a~------~~l~~~~~~~~l~i-~G~g~~---~~~~~~l--------------  360 (493)
                      +.+.+.+.++++.|..   ..+..+++.+      ..+.+.. .+++++ +|.+..   ......+              
T Consensus        23 ~~~~~~~~VlVtgGS~---~~~n~li~~vl~~~~l~~L~~~~-~~~vv~q~G~~~~~~~~~~~~~~~~~~~~~l~p~~~~   98 (224)
T 2jzc_A           23 EGIIEEKALFVTCGAT---VPFPKLVSCVLSDEFCQELIQYG-FVRLIIQFGRNYSSEFEHLVQERGGQRESQKIPIDQF   98 (224)
T ss_dssp             -CCCCSCCEEEECCSC---CSCHHHHHHHTSHHHHHHHHTTT-CCCEEECCCSSSCCCCCSHHHHHTCEECSCCCSSCTT
T ss_pred             CCCCCCCEEEEEcCCc---hHHHHHHHHHHHHHHHHHHhcCC-CeEEEEEECCCchhhHHHHHHhhhccccccccccccc
Confidence            3444555778888885   3356665544      5554432 245544 575543   1111111              


Q ss_pred             --------------cCcEEEecCCCHHHHHHHHH-HcCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCcc------
Q 039338          361 --------------GHQVLVMGSMSPAELRAFYN-AIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKG------  419 (493)
Q Consensus       361 --------------~~~V~~~g~~~~~~~~~~~~-~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~------  419 (493)
                                    ..++...+++  +++.++|+ .||++|.   +  +-..+++|++++|+|.|.-..+...+      
T Consensus        99 ~~~~~~~~~~~~~~~~~v~v~~f~--~~m~~~l~~~AdlvIs---h--aGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~n  171 (224)
T 2jzc_A           99 GCGDTARQYVLMNGKLKVIGFDFS--TKMQSIIRDYSDLVIS---H--AGTGSILDSLRLNKPLIVCVNDSLMDNHQQQI  171 (224)
T ss_dssp             CTTCSCEEEESTTTSSEEEECCSS--SSHHHHHHHHCSCEEE---S--SCHHHHHHHHHTTCCCCEECCSSCCCCHHHHH
T ss_pred             cccccccccccccCCceEEEeecc--chHHHHHHhcCCEEEE---C--CcHHHHHHHHHhCCCEEEEcCcccccchHHHH
Confidence                          1356777887  69999999 9999995   3  33569999999999999887643211      


Q ss_pred             -ceeeeCcceEEECCCHHHHHHHHHHHHH
Q 039338          420 -TIVVDDEFGFMFAPNVESLHKTLEAAVS  447 (493)
Q Consensus       420 -e~v~~~~~G~~~~~d~~~l~~~i~~ll~  447 (493)
                       +.+.+.+.++.+  +++.|.++|.++..
T Consensus       172 A~~l~~~G~~~~~--~~~~L~~~i~~l~~  198 (224)
T 2jzc_A          172 ADKFVELGYVWSC--APTETGLIAGLRAS  198 (224)
T ss_dssp             HHHHHHHSCCCEE--CSCTTTHHHHHHHH
T ss_pred             HHHHHHCCCEEEc--CHHHHHHHHHHHHh
Confidence             123333445554  55677777777633

>1xv5_A AGT, DNA alpha-glucosyltransferase; HET: DNA CME UDP; 1.73A {Enterobacteria phage T4} PDB: 1y6f_A* 1y6g_A* 1ya6_A* 1y8z_A*

Probab=93.41  E-value=3.1  Score=34.94  Aligned_cols=327  Identities=14%  Similarity=0.123  Sum_probs=181.5

Q ss_pred             ceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCCCccc
Q 039338           83 TLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEADKWR  162 (493)
Q Consensus        83 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (493)
                      .|||+++-..   +....|+..+....-..+.+.||+|+++......+.......        ...-.+..+        
T Consensus         1 smricifmar---glegcgvtkfsleqrdwfiknghevtlvyakdksftrtsshd--------hksfsipvi--------   61 (401)
T 1xv5_A            1 SMRICIFMAR---GLEGCGVTKFSLEQRDWFIKNGHEVTLVYAKDKSFTRTSSHD--------HKSFSIPVI--------   61 (401)
T ss_dssp             CCEEEEEETT---CCCSSHHHHHHHHHHHHHHHTTCEEEEEEECSSCCTTTTSSS--------CTTTCEEEC--------
T ss_pred             CceEEEEeec---cccccCceeeehhhhhhhhcCCcEEEEEEecccccccccccc--------CccccceeE--------
Confidence            3889988764   347789999999999999999999999987665521111111        111112221        


Q ss_pred             cccchHHHHHHhcCCCCcEEEeCccch--------hH---HhhhccC--cEEEEeccchhhhhhhhhhhhhhcCCCCccc
Q 039338          163 YSKGWEQFDEENQREPFDVVHSESVAL--------PH---WLARNVT--NLAVSWHGIALESLQSGIFQDLTRKPLEPMS  229 (493)
Q Consensus       163 ~~~~~~~~~~~~~~~~~DiI~~~~~~~--------~~---~~~~~~p--~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~  229 (493)
                      ..+-+.+..+++  .+.||+++++.+.        ..   ++..-.|  ++++.-|+.........              
T Consensus        62 lakeydkalklv--ndcdiliinsvpatsvqeatinnykklldnikpsirvvvyqhdhsvlslrrn--------------  125 (401)
T 1xv5_A           62 LAKEYDKALKLV--NDCDILIINSVPATSVQEATINNYKKLLDNIKPSIRVVVYQHDHSVLSLRRN--------------  125 (401)
T ss_dssp             TTTCHHHHHHHH--TSCSEEEEEECCBTTSCHHHHHHHHHHHHHSCTTSEEEEEECCCSHHHHTTB--------------
T ss_pred             ehhhhHHHhhhh--ccCcEEEEccCccchhHHHHHhhHHHHHhcCCCceEEEEEeccchhhhhhhh--------------
Confidence            112233444444  4689988876421        11   1111122  37777787433221111              


Q ss_pred             hHhHhHHHHHHHHHHHHHHhhccCCeEEEcChh---HHHHHHHHhCCCCCcEEEecCCccC----CCccCCcccchhhhh
Q 039338          230 LAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDS---CGEMLRDVYQIPSERVHVILNGINE----NEYGVDLSLGQSFRS  302 (493)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~---~~~~~~~~~~~~~~~v~vi~ngvd~----~~~~~~~~~~~~~r~  302 (493)
                                    +......+++|.++..|+.   .+-.+.+.|+   +.+.... .+..    -.|+|.. +.-.+|.
T Consensus       126 --------------lgleetvrradvifshsdngdfnkvlmkewyp---etvslfd-dieeaptvynfqppm-divkvrs  186 (401)
T 1xv5_A          126 --------------LGLEETVRRADVIFSHSDNGDFNKVLMKEWYP---ETVSLFD-DIEEAPTVYNFQPPM-DIVKVRS  186 (401)
T ss_dssp             --------------SSHHHHHHHCSEEEESCTTSHHHHTHHHHHSC---SSCCSSS-CCCCCCCEEECCCCB-CHHHHHH
T ss_pred             --------------cChHHhhhhhceEEecCCCCcHHHHHHHhhcc---chhhhhc-chhhCCceeccCCCc-eeeeeeh
Confidence                          1111345689999998863   2234445442   2221111 1110    0122221 1123333


Q ss_pred             hhCCCCCC--cEEEEEecccccccChHHHHHHHHHHHhhCCCeEEEEEeCCCcHH--HHhh-----------------hc
Q 039338          303 RIGIPKNA--SLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQ--RYKD-----------------FG  361 (493)
Q Consensus       303 ~~~i~~~~--~~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~--~~~~-----------------l~  361 (493)
                      .+--+-..  --+=-++||-...||+..+.+.-.++.+-. .-.-++-|-.....  .+++                 ++
T Consensus       187 tywkdvseinmninrwigrtttwkgfyqmfdfhekflkpa-gkstvmeglerspafiaikekgipyeyygnreidkmnla  265 (401)
T 1xv5_A          187 TYWKDVSEINMNINRWIGRTTTWKGFYQMFDFHEKFLKPA-GKSTVMEGLERSPAFIAIKEKGIPYEYYGNREIDKMNLA  265 (401)
T ss_dssp             HHCCCGGGCEEEEEEEECCSCGGGCHHHHHHHHHHTTTTT-TCEEEEECCCCSHHHHHHHHTTCCEEEECGGGGGGCCCS
T ss_pred             hhhccHHHhhcchhhhhcccchhHhHHHHhhHHHHhcCcc-chhhhhhhhhcCCceEEEcccCCchhhcCcchhhhhcCC
Confidence            33211111  012248899999999999988777765521 12334445322211  1111                 11


Q ss_pred             --CcEEEecCCCHHHHHHHHHHcCEEEeCCCC-----CCCCChHHHHHHHcCCcEEecC---------CCCCccceeeeC
Q 039338          362 --HQVLVMGSMSPAELRAFYNAIDIFVNPTLR-----PQGLDLTLMEAMMSGKPVMASR---------FPSIKGTIVVDD  425 (493)
Q Consensus       362 --~~V~~~g~~~~~~~~~~~~~adv~v~ps~~-----~eg~~~~~~EAm~~G~PvI~s~---------~~~~~~e~v~~~  425 (493)
                        ....++.-.-..++.+-++.+.+....|.-     ..++-.+-+|--+||+-.|--.         +...+  +..++
T Consensus       266 pnqpaqildcyinsemlermsksgfgyqlsklnqkylqrsleythlelgacgtipvfwkstgenlkfrvdntp--ltshd  343 (401)
T 1xv5_A          266 PNQPAQILDCYINSEMLERMSKSGFGYQLSKLNQKYLQRSLEYTHLELGACGTIPVFWKSTGENLKFRVDNTP--LTSHD  343 (401)
T ss_dssp             SSCCEEEESCCCHHHHHHHHHTEEEEEECCCCCGGGCSSCCCHHHHHHHHHTSEEEEEHHHHHHSBCTTTCCB--GGGSC
T ss_pred             CCCcchhhhheecHHHHHHhhhcCcccchHHHHHHHHHhhhhhheeecccccceeeeecccCcceEEEecCCc--ccccC
Confidence              223445544468899999999998776531     2456789999999999655432         22222  11222


Q ss_pred             cceEEECC-CHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHh
Q 039338          426 EFGFMFAP-NVESLHKTLEAAVSEGPMRLAQRGEACRQYAASM  467 (493)
Q Consensus       426 ~~G~~~~~-d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~  467 (493)
                      ..-+.++. |.++-.+.|.++-.+ +..+.+-+++++++.-++
T Consensus       344 sgiiwfdendmestferikelssd-ralydrerekayeflyqh  385 (401)
T 1xv5_A          344 SGIIWFDENDMESTFERIKELSSD-RALYDREREKAYEFLYQH  385 (401)
T ss_dssp             CSCEEECTTCHHHHHHHHHHHHTC-HHHHHHHHHHHHHHHHHH
T ss_pred             CceEEecCCchHHHHHHHHHhccc-hhhhhHHHHHHHHHHHhc
Confidence            22345565 999999999999888 899999889998877554

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=92.09  E-value=2.7  Score=41.15  Aligned_cols=121  Identities=15%  Similarity=0.160  Sum_probs=65.8

Q ss_pred             ccChHHHHHHHHHHHhhCCCeEEEEEeCCCc--------------------HHHHhhh----cCcEEEecCCCHHHHHH-
Q 039338          323 DKGHPLLHEAFSKLMVKYPDVYLIVAGSGPW--------------------EQRYKDF----GHQVLVMGSMSPAELRA-  377 (493)
Q Consensus       323 ~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~--------------------~~~~~~l----~~~V~~~g~~~~~~~~~-  377 (493)
                      .++++.+.+.+....+  +--+++|+|.|..                    .++.+++    .+-+.+.|--.+.++.. 
T Consensus       218 ~~~i~~~~~~~g~~~~--~~~~v~I~GgG~ig~~lA~~L~~~~~v~iIE~d~~r~~~la~~l~~~~Vi~GD~td~~~L~e  295 (461)
T 4g65_A          218 SNHIRSVMSELQRLEK--PYRRIMIVGGGNIGASLAKRLEQTYSVKLIERNLQRAEKLSEELENTIVFCGDAADQELLTE  295 (461)
T ss_dssp             TTTHHHHHHHTTGGGS--CCCEEEEECCSHHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHCTTSEEEESCTTCHHHHHH
T ss_pred             cchHHHHHHhhccccc--cccEEEEEcchHHHHHHHHHhhhcCceEEEecCHHHHHHHHHHCCCceEEeccccchhhHhh
Confidence            4667777776654433  3346888887642                    2222222    24566777776555544 


Q ss_pred             -HHHHcCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCc-cceeeeCcceEEECCCHHH-HHHHHHHHHH
Q 039338          378 -FYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIK-GTIVVDDEFGFMFAPNVES-LHKTLEAAVS  447 (493)
Q Consensus       378 -~~~~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~-~e~v~~~~~G~~~~~d~~~-l~~~i~~ll~  447 (493)
                       =+..+|+++..+...|.-=++.+-|-.+|.+=+.+...... .+++...+....+.  +.. .+..|.+.+.
T Consensus       296 e~i~~~D~~ia~T~~De~Ni~~~llAk~~gv~kvIa~vn~~~~~~l~~~~gid~vis--p~~~~a~~I~~~i~  366 (461)
T 4g65_A          296 ENIDQVDVFIALTNEDETNIMSAMLAKRMGAKKVMVLIQRGAYVDLVQGGVIDVAIS--PQQATISALLTHVR  366 (461)
T ss_dssp             TTGGGCSEEEECCSCHHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHCSSSSCEEEC--HHHHHHHHHHHHHH
T ss_pred             cCchhhcEEEEcccCcHHHHHHHHHHHHcCCccccccccccchhhhhhccccceeeC--HHHHHHHHHHHHhh
Confidence             36889999987643233224556677888877766543221 13343333344444  333 3455555444

>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}

Probab=84.93  E-value=1.4  Score=39.88  Aligned_cols=47  Identities=15%  Similarity=0.163  Sum_probs=31.5

Q ss_pred             CCCCceEEEEEeccCCCCCCCCchHH-HHHHHHHHHHhCCCEEEEEecCCCC
Q 039338           79 PSKFTLKIAVFSRKWPISTTPGGMER-HAHTLHVALARRGHRVHIFTSPVDN  129 (493)
Q Consensus        79 ~~~~~mkIl~v~~~~p~~~~~gG~~~-~~~~l~~~L~~~G~~V~v~~~~~~~  129 (493)
                      ..++.||||+|..+ |   ..++... .....++.|.+.||+|.++-.....
T Consensus        18 ~~m~~MKiLII~aH-P---~~~S~n~aL~~~~~~~l~~~G~eV~v~DLy~~~   65 (280)
T 4gi5_A           18 LYFQSMKVLLIYAH-P---EPRSLNGALKNFAIRHLQQAGHEVQVSDLYAMR   65 (280)
T ss_dssp             ----CCEEEEEECC-S---CTTSHHHHHHHHHHHHHHHTTCEEEEEETTTTT
T ss_pred             chhhCCeEEEEEeC-C---CCccHHHHHHHHHHHHHHHCCCeEEEEEccccC
Confidence            35788999999885 3   3344433 3456788899999999999765444

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=84.62  E-value=1.1  Score=40.77  Aligned_cols=33  Identities=27%  Similarity=0.418  Sum_probs=25.4

Q ss_pred             eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecC
Q 039338           84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSP  126 (493)
Q Consensus        84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~  126 (493)
                      |||++.          ||.+..=..|++.|.++||+|++++..
T Consensus         1 MkILVT----------GatGfIG~~L~~~L~~~G~~V~~l~R~   33 (298)
T 4b4o_A            1 MRVLVG----------GGTGFIGTALTQLLNARGHEVTLVSRK   33 (298)
T ss_dssp             CEEEEE----------TTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CEEEEE----------CCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence            898765          444444566999999999999999754

>2v4n_A Multifunctional protein SUR E; hydrolase, surviVal protein, stationary phase, phosph mononucleotidase, divalent metal ION; 1.7A {Salmonella typhimurium} PDB: 2v4o_A

Probab=80.89  E-value=7.1  Score=34.44  Aligned_cols=39  Identities=18%  Similarity=0.222  Sum_probs=29.6

Q ss_pred             ceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCC
Q 039338           83 TLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDN  129 (493)
Q Consensus        83 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~  129 (493)
                      .||||+....       |=..--+..|+++|++.| +|+|+.+..+.
T Consensus         1 ~M~ILlTNDD-------Gi~apGi~aL~~~L~~~g-~V~VVAP~~~~   39 (254)
T 2v4n_A            1 SMRILLSNDD-------GVHAPGIQTLAKALREFA-DVQVVAPDRNR   39 (254)
T ss_dssp             CCEEEEECSS-------CTTCHHHHHHHHHHTTTS-EEEEEEESSCC
T ss_pred             CCeEEEEcCC-------CCCCHHHHHHHHHHHhCC-cEEEEeeCCCC
Confidence            4899888763       223345888999998876 99999987766

>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}

Probab=80.44  E-value=3.6  Score=37.84  Aligned_cols=106  Identities=11%  Similarity=0.112  Sum_probs=51.7

Q ss_pred             CCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCcc-ccCCC--CCCCCCCceEeecCC
Q 039338           81 KFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISH-QENDD--GSNNKYPLLHFHEGE  157 (493)
Q Consensus        81 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~  157 (493)
                      |++|||+|+..           ..+.....++|.+.||+|..+.+..+......... ...+.  -...+.+   +..  
T Consensus         5 ~~~mrivf~Gt-----------~~fa~~~L~~L~~~~~~v~~Vvt~pd~p~grg~~~~~~~v~~~A~~~gIp---v~~--   68 (318)
T 3q0i_A            5 SQSLRIVFAGT-----------PDFAARHLAALLSSEHEIIAVYTQPERPAGRGKKLTASPVKTLALEHNVP---VYQ--   68 (318)
T ss_dssp             --CCEEEEECC-----------SHHHHHHHHHHHTSSSEEEEEECCCC---------CCCHHHHHHHHTTCC---EEC--
T ss_pred             ccCCEEEEEec-----------CHHHHHHHHHHHHCCCcEEEEEcCCCCcccccccCCCCHHHHHHHHcCCC---EEc--
Confidence            56899999975           12455566788888999887766543301110000 00000  0011111   111  


Q ss_pred             CCccccccchHHHHHHhcCCCCcEEEeCccc--hhHHhhhccCcEEEEecc
Q 039338          158 ADKWRYSKGWEQFDEENQREPFDVVHSESVA--LPHWLARNVTNLAVSWHG  206 (493)
Q Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~DiI~~~~~~--~~~~~~~~~p~~v~~~h~  206 (493)
                      +....    -..+.+.+++.+||++++.++.  ++..+....+.-++.+|.
T Consensus        69 ~~~~~----~~~~~~~l~~~~~Dliv~~~y~~ilp~~~l~~~~~g~iNiHp  115 (318)
T 3q0i_A           69 PENFK----SDESKQQLAALNADLMVVVAYGLLLPKVVLDTPKLGCINVHG  115 (318)
T ss_dssp             CSCSC----SHHHHHHHHTTCCSEEEESSCCSCCCHHHHTSSTTCEEEEES
T ss_pred             cCcCC----CHHHHHHHHhcCCCEEEEeCccccCCHHHHhhCcCCEEEeCC
Confidence            11111    1356666778899999987652  333333332324777885

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	493
d2bisa1	437	c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyro	7e-22
d1rzua_	477	c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacte	2e-19
d2iw1a1	370	c.87.1.8 (A:2-371) Lipopolysaccharide core biosynt	1e-10
d1uqta_	456	c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA	1e-08

>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Length = 437

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Pyrococcus abyssi [TaxId: 29292]

 Score = 95.7 bits (236), Expect = 7e-22
 Identities = 67/442 (15%), Positives = 135/442 (30%), Gaps = 63/442 (14%)

Query: 85  KIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGS 144
           K+ +   ++      GG+      +  ALA  GH V +FT          I         
Sbjct: 2   KVLLLGFEFLPVKV-GGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKIRVFGEE 60

Query: 145 NNKYPLLHFHEGE----------ADKWRYSKGWEQFDEE----------------NQREP 178
                                    +  Y  GW+    +                 +   
Sbjct: 61  VQVKVSYEERGNLRIYRIGGGLLDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLREEPL 120

Query: 179 FDVVHSES--VALPHWLARNVTN--LAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNK 234
            DVVH           L +         + H +    L +  F +     L P       
Sbjct: 121 PDVVHFHDWHTVFAGALIKKYFKIPAVFTIHRLNKSKLPAFYFHEAGLSELAP------- 173

Query: 235 SLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEY---- 290
                   +  E            +S          ++    ++  + NGI+ + +    
Sbjct: 174 -----YPDIDPEHTGGYIADIVTTVSRGYLIDEWGFFRNFEGKITYVFNGIDCSFWNESY 228

Query: 291 --GVDLSLGQSFRSRIGIPKNASLVLGVAGRLVKDKGHPLLHEAFSK--LMVKYPDVYLI 346
             G      +S  S+ G+ +     + +       KG  +L +A        ++ ++  I
Sbjct: 229 LTGSRDERKKSLLSKFGMDEGV-TFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFI 287

Query: 347 VAGSGPW------EQRYKDFGHQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLM 400
           + G G            +  G+  ++   +S   +R  Y ++D  + P+   +   L  +
Sbjct: 288 IIGKGDPELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDFVIIPS-YFEPFGLVAL 346

Query: 401 EAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAP-NVESLHKTLEAAVSEGPMRLAQRGEA 459
           EAM  G   +AS    ++   ++ +E G +    +   L   +  A+      L++  E 
Sbjct: 347 EAMCLGAIPIASAVGGLRD--IITNETGILVKAGDPGELANAILKALELSRSDLSKFREN 404

Query: 460 CRQYAASMFTANKMALAYERLF 481
           C++ A S F+  K A  Y + +
Sbjct: 405 CKKRAMS-FSWEKSAERYVKAY 425

>d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} Length = 477

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 88.6 bits (218), Expect = 2e-19
 Identities = 63/465 (13%), Positives = 125/465 (26%), Gaps = 81/465 (17%)

Query: 94  PISTTPGGMERHAHTLHVALARRGHRVHIFT----------------------------- 124
           P+  T GG+      L +AL   G R                                  
Sbjct: 12  PLIKT-GGLADVVGALPIALEAHGVRTRTLIPGYPAVKAAVTDPVKCFEFTDLLGEKADL 70

Query: 125 --SPVDNINSPSISHQENDDGSNNKYPLLHFHEGEADKWRYSKGWEQFDEENQR----EP 178
                + ++   +      + S   Y      +   +  R++                  
Sbjct: 71  LEVQHERLDLLILDAPAYYERSGGPYLGQTGKDYPDNWKRFAALSLAAARIGAGVLPGWR 130

Query: 179 FDVVHSES------VALPHWLARNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAF 232
            D+VH+             +         ++ H IA +             P     +  
Sbjct: 131 PDMVHAHDWQAAMTPVYMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEG 190

Query: 233 NKS------LQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGIN 286
            +       L+G +            YA  + ++   G  L  V    +  +H I+NGI+
Sbjct: 191 IEYYNDVSFLKGGLQTATALSTVSPSYAEEI-LTAEFGMGLEGVIGSRAHVLHGIVNGID 249

Query: 287 ENEYG-----------------VDLSLGQSFRSRIGIPKNASLVLGVAGRLVKDKGHPLL 329
            + +                        ++      I  + S +  V  RL   KG  L+
Sbjct: 250 ADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFRIDDDGSPLFCVISRLTWQKGIDLM 309

Query: 330 HEAFSKLMVKYPDVYLIVAGSGP----WEQRYKDFGHQVLVMGSMSPAELRAFYNAIDIF 385
            EA  +++     + ++ AG                 +V V    +           D  
Sbjct: 310 AEAVDEIVSLGGRLVVLGAGDVALEGALLAAASRHHGRVGVAIGYNEPLSHLMQAGCDAI 369

Query: 386 VNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIK--------GTIVVDDEFGFMFAP-NVE 436
           + P+ R +   LT + A+  G   + +R   +           +      G  F+P  ++
Sbjct: 370 IIPS-RFEPCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKAATGVQFSPVTLD 428

Query: 437 SLHKTLEAAVSEGPMRLAQRGEACRQYAASMFTANKMALAYERLF 481
            L + +   V           +  +    S  +  K A  Y  L+
Sbjct: 429 GLKQAIRRTV-RYYHDPKLWTQMQKLGMKSDVSWEKSAGLYAALY 472

>d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} Length = 370

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Lipopolysaccharide core biosynthesis protein RfaG
species: Escherichia coli [TaxId: 562]

 Score = 60.7 bits (145), Expect = 1e-10
 Identities = 56/402 (13%), Positives = 121/402 (30%), Gaps = 44/402 (10%)

Query: 86  IAVFSRKWPISTTP-GGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGS 144
           +A    K+     P GG++R    +   +A RGH V ++T   +     +    +    S
Sbjct: 2   VAFCLYKYF----PFGGLQRDFMRIASTVAARGHHVRVYTQSWEGDCPKAFELIQVPVKS 57

Query: 145 NNKYPLLHFHEGEADKWRYSKGWEQFDEENQREPFDVVHSESVALPHWLARNVTNLAVSW 204
           +  +     +             ++    N+    DV  +  V     +A+         
Sbjct: 58  HTNHGRNAEYYAWVQNHLKEHPADRVVGFNKMPGLDVYFAADVCYAEKVAQ--------E 109

Query: 205 HGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCG 264
            G                       L    S                K    + ++D   
Sbjct: 110 KGF----------------------LYRLTSRYRHYAAFERATFEQGKSTKLMMLTDKQI 147

Query: 265 EMLRDVYQIPSERVHVILNGINENE--YGVDLSLGQSFRSRIGIPKNASLVLGV--AGRL 320
              +  YQ   ER  ++  GI  +        +  + +R + GI +  +L+L V      
Sbjct: 148 ADFQKHYQTEPERFQILPPGIYPDRKYSEQIPNSREIYRQKNGIKEQQNLLLQVGSDFGR 207

Query: 321 VKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDFGHQVLVMGSMSPAELRAFYN 380
                      +  + +     ++++        +   +       +   S     +   
Sbjct: 208 KGVDRSIEALASLPESLRHNTLLFVVGQDKPRKFEALAEKLGVRSNVHFFSGRNDVSELM 267

Query: 381 AIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAP--NVESL 438
           A    +      +   + L+EA+ +G PV+ +         + D   G + A   + E L
Sbjct: 268 AAADLLLHPAYQEAAGIVLLEAITAGLPVLTTAVCGYA-HYIADANCGTVIAEPFSQEQL 326

Query: 439 HKTLEAAVSEGPMRLAQRGEACRQYAASMFTANKMALAYERL 480
           ++ L  A+++ P+R     E  R YA +      +      +
Sbjct: 327 NEVLRKALTQSPLR-MAWAENARHYADT-QDLYSLPEKAADI 366

>d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} Length = 456

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Trehalose-6-phosphate synthase, OtsA
domain: Trehalose-6-phosphate synthase, OtsA
species: Escherichia coli [TaxId: 562]

 Score = 54.5 bits (130), Expect = 1e-08
 Identities = 28/203 (13%), Positives = 53/203 (26%), Gaps = 39/203 (19%)

Query: 307 PKNASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPD----VYLIVAGSGPWEQ------- 355
            KN   +  V  RL   KG P    A+  L+ KYP     +                   
Sbjct: 251 LKNVQNIFSV-ERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDI 309

Query: 356 ---------------RYKDFGHQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLM 400
                              +     +        L   +   D+ +   LR  G++L   
Sbjct: 310 RHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLR-DGMNLVAK 368

Query: 401 EAMMSGKP-----VMASRFPSIKGTIVVDDEFGFMFAP-NVESLHKTLEAAVSEGPMRLA 454
           E + +  P     ++ S+F        +      +  P + + +   L+ A++       
Sbjct: 369 EYVAAQDPANPGVLVLSQFAGAAN--ELTS--ALIVNPYDRDEVAAALDRALTMSLAERI 424

Query: 455 QRGEACRQYAASMFTANKMALAY 477
            R              N     +
Sbjct: 425 SRHAEMLDVIVK-NDINHWQECF 446

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	493
d1rzua_	477	Glycogen synthase 1, GlgA {Agrobacterium tumefacie	100.0
d2bisa1	437	Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI	100.0
d2iw1a1	370	Lipopolysaccharide core biosynthesis protein RfaG	100.0
d2bfwa1	196	Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI	99.95
d2f9fa1	166	First mannosyl transferase WbaZ {Archaeoglobus ful	99.92
d1uqta_	456	Trehalose-6-phosphate synthase, OtsA {Escherichia	99.92
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	99.43
d1rrva_	401	TDP-vancosaminyltransferase GftD {Amycolatopsis or	99.27
d1pn3a_	391	TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi	99.22
d1o6ca_	377	UDP-N-acetylglucosamine 2-epimerase {Bacillus subt	99.21
d1v4va_	373	UDP-N-acetylglucosamine 2-epimerase {Thermus therm	99.19
d1iira_	401	UDP-glucosyltransferase GtfB {Amycolatopsis orient	99.07
d1f6da_	376	UDP-N-acetylglucosamine 2-epimerase {Escherichia c	99.06
d2c1xa1	450	UDP glucose:flavonoid 3-o-glucosyltransferase {Gra	98.83
d2acva1	461	Triterpene UDP-glucosyl transferase UGT71G1 {Medic	98.72
d2pq6a1	473	(Iso)flavonoid glycosyltransferase {Medicago trunc	98.58
d2vcha1	471	Hydroquinone glucosyltransferase {Thale cress (Ara	98.56
d1pswa_	348	ADP-heptose LPS heptosyltransferase II {Escherichi	98.21
d2gj4a1	824	Glycogen phosphorylase {Rabbit (Oryctolagus cunicu	97.77
d1l5wa_	796	Maltodextrin phosphorylase (MALP) {Escherichia col	97.55
d1ygpa_	876	Glycogen phosphorylase {Baker's yeast (Saccharomyc	96.74
d1uana_	227	Hypothetical protein TT1542 {Thermus thermophilus	90.13
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	87.73
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	87.53
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	87.1
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	86.84
d2blna2	203	Polymyxin resistance protein ArnA, N-terminal doma	86.72
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	86.51
d1fmta2	206	Methionyl-tRNAfmet formyltransferase {Escherichia	86.11
d1ydga_	201	Trp repressor binding protein WrbA {Deinococcus ra	85.83
d1vkza2	90	Glycinamide ribonucleotide synthetase (GAR-syn), N	85.01
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	84.84
d2d1pa1	128	tRNA 2-thiouridine synthesizing protein D, TusD {E	84.82
d2hy5a1	130	Sulfurtransferase DsrE {Chromatium vinosum [TaxId:	84.32
d1xjca_	165	Molybdopterin-guanine dinucleotide biosynthesis pr	84.15
d1j9ja_	247	SurE homolog TM1662 {Thermotoga maritima [TaxId: 2	84.0
d2bw0a2	203	10-formyltetrahydrofolate dehydrogenase domain 1 {	83.94
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	83.36
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	81.78
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	81.71
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	80.07

>d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=100.00  E-value=3.6e-44  Score=360.52  Aligned_cols=389  Identities=17%  Similarity=0.160  Sum_probs=259.4

Q ss_pred             eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCC---CCCC---------CCCce
Q 039338           84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDD---GSNN---------KYPLL  151 (493)
Q Consensus        84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~---~~~~---------~~~~~  151 (493)
                      |||++|+.+|+|....||.+.++..|+++|+++||+|+|+++....+.....+......   ....         ....+
T Consensus         1 M~i~~v~~e~~P~~~~GGl~~vv~~La~~L~~~Gh~V~Vi~P~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~   80 (477)
T d1rzua_           1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGYPAVKAAVTDPVKCFEFTDLLGEKADLLEVQHERLDL   80 (477)
T ss_dssp             CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCHHHHHHCCSCEEEEEESCSSSCCEEEEEEEETTEEE
T ss_pred             CEEEEEEEeeecccccCcHHHHHHHHHHHHHHcCCeEEEEecCCcchhhhcccceEEEEEeccCCceEEEEEEEECCeeE
Confidence            99999999886655679999999999999999999999998643210000000000000   0000         00001


Q ss_pred             Eeec------CCCCc------cccc-------c----chHHHHHHhcCCCCcEEEeCcc--chhH-Hh----hhccCcEE
Q 039338          152 HFHE------GEADK------WRYS-------K----GWEQFDEENQREPFDVVHSESV--ALPH-WL----ARNVTNLA  201 (493)
Q Consensus       152 ~~~~------~~~~~------~~~~-------~----~~~~~~~~~~~~~~DiI~~~~~--~~~~-~~----~~~~p~~v  201 (493)
                      +++.      .....      ..+.       .    ..+.+...+...+|||||+|+.  .+.. ++    ...+| ++
T Consensus        81 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pDIvH~h~~~~~l~~~~~~~~~~~~ip-~V  159 (477)
T d1rzua_          81 LILDAPAYYERSGGPYLGQTGKDYPDNWKRFAALSLAAARIGAGVLPGWRPDMVHAHDWQAAMTPVYMRYAETPEIP-SL  159 (477)
T ss_dssp             EEEECHHHHCSSSCSSBCTTSSBCTTHHHHHHHHHHHHHHHHTTCSSSCCCSEEEEEHHHHTTHHHHHHHSSSCCCC-EE
T ss_pred             EEecChhhcccCCCcccCcccccccccHHHHHHHHHHHHhhhhhcccCCCCCEEEecchhHHHHHHHHHHhhCCCCC-EE
Confidence            1000      00000      0000       0    0111122224568999999964  1111 11    12357 99


Q ss_pred             EEeccchhhhhhh-hhhhhhhcCCCCccchHhHhHHHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHH-h--------
Q 039338          202 VSWHGIALESLQS-GIFQDLTRKPLEPMSLAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDV-Y--------  271 (493)
Q Consensus       202 ~~~h~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~-~--------  271 (493)
                      .++|+..+..... +....+.............  .   ......++..+..+|.++++|....+..... +        
T Consensus       160 ~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~~~~~~ad~~~~vs~~~~~~~~~~~~~~~~~~~~  234 (477)
T d1rzua_         160 LTIHNIAFQGQFGANIFSKLALPAHAFGMEGIE--Y---YNDVSFLKGGLQTATALSTVSPSYAEEILTAEFGMGLEGVI  234 (477)
T ss_dssp             EEESCTTCCCEECGGGGGGSCCCGGGSSTTTTE--E---TTEEEHHHHHHHHCSEEEESCHHHHHHTTSHHHHTTCHHHH
T ss_pred             EEEecccccccCCHHHHHHhhcchhhccccccc--c---cchhHHHHHHHHhhhhhhhccHHHHHHHHHHhcCcchhhhh
Confidence            9999875433211 1111111000000000000  0   0000001233567899999999877654221 1        


Q ss_pred             CCCCCcEEEecCCccCCCccCCcc-----------------cchhhhhhhCCCCCCcEEEEEecccccccChHHHHHHHH
Q 039338          272 QIPSERVHVILNGINENEYGVDLS-----------------LGQSFRSRIGIPKNASLVLGVAGRLVKDKGHPLLHEAFS  334 (493)
Q Consensus       272 ~~~~~~v~vi~ngvd~~~~~~~~~-----------------~~~~~r~~~~i~~~~~~~i~~~Gr~~~~Kg~~~ll~a~~  334 (493)
                      .....++.+|+||+|.+.|.|...                 ....++...++++++.++|+++||+.++||++.+++|+.
T Consensus       235 ~~~~~~~~vi~ngv~~~~~~p~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vgrl~~~KG~~~Ll~a~~  314 (477)
T d1rzua_         235 GSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFRIDDDGSPLFCVISRLTWQKGIDLMAEAVD  314 (477)
T ss_dssp             HTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBCTTHHHHHHHHHHHHTCCCSSSCEEEEESCBSTTTTHHHHHTTHH
T ss_pred             hhccccEEEEECCcchhhccccccccccccchhhhHHHhhhhHHHHHHhcccccCCccEEEEEeeeeecCCcHHHHHHHH
Confidence            123468999999999988866422                 123456678887777688999999999999999999999


Q ss_pred             HHHhhCCCeEEEEEeCCCcHHHH------hhhcCcEEEecCCCHHHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcCCc
Q 039338          335 KLMVKYPDVYLIVAGSGPWEQRY------KDFGHQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKP  408 (493)
Q Consensus       335 ~l~~~~~~~~l~i~G~g~~~~~~------~~l~~~V~~~g~~~~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G~P  408 (493)
                      ++.+.  +.+++++|.|+.....      .++..+|.+.+..+.+++..+|++||++|+||.+ |+||++++|||+||+|
T Consensus       315 ~~~~~--~~~l~~~G~G~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~aD~~v~PS~~-E~fglv~lEAma~G~P  391 (477)
T d1rzua_         315 EIVSL--GGRLVVLGAGDVALEGALLAAASRHHGRVGVAIGYNEPLSHLMQAGCDAIIIPSRF-EPCGLTQLYALRYGCI  391 (477)
T ss_dssp             HHHHT--TCEEEEEECBCHHHHHHHHHHHHHTTTTEEEEESCCHHHHHHHHHHCSEEEECCSC-CSSCSHHHHHHHHTCE
T ss_pred             HHHhh--CCeEEEEecCCchHHHHHHHHHhhcCCeEEEEcccChhHHHHHHHhCccccCCccc-cCCCHHHHHHHHcCCC
Confidence            98875  6789999988643322      2345899999999999999999999999999976 9999999999999999


Q ss_pred             EEecCCCCCccceeeeCc---------ceEEECC-CHHHHHHHHHHHHH---cCcHHHHHHHHHHHHHHHHhcCHHHHHH
Q 039338          409 VMASRFPSIKGTIVVDDE---------FGFMFAP-NVESLHKTLEAAVS---EGPMRLAQRGEACRQYAASMFTANKMAL  475 (493)
Q Consensus       409 vI~s~~~~~~~e~v~~~~---------~G~~~~~-d~~~l~~~i~~ll~---~~~~~~~~~~~~~~~~~~~~fs~~~~~~  475 (493)
                      ||+|+.||++ |+|.++.         +|+++++ |+++|+++|.++++   | ++.+++|++++.   +++|||+++++
T Consensus       392 vVas~~GG~~-E~v~d~~~~~~~~~~~~G~l~~~~d~~~la~ai~~~l~~~~~-~~~~~~~~~~a~---~~~fsw~~~a~  466 (477)
T d1rzua_         392 PVVARTGGLA-DTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHD-PKLWTQMQKLGM---KSDVSWEKSAG  466 (477)
T ss_dssp             EEEESSHHHH-HHCCBCCHHHHHTTCCCBEEESSCSHHHHHHHHHHHHHHHTC-HHHHHHHHHHHH---TCCCBHHHHHH
T ss_pred             EEEcCCCCCc-ceeecCCccccccCCCceEEeCCCCHHHHHHHHHHHHhhhCC-HHHHHHHHHHHH---HhhCCHHHHHH
Confidence            9999999999 8888764         8999999 99999999998876   5 788888887763   45799999999


Q ss_pred             HHHHHHHHHhh
Q 039338          476 AYERLFLCIKN  486 (493)
Q Consensus       476 ~~~~~~~~i~~  486 (493)
                      +|+++|+++++
T Consensus       467 ~~~~lY~~ll~  477 (477)
T d1rzua_         467 LYAALYSQLIS  477 (477)
T ss_dssp             HHHHHHHHHTC
T ss_pred             HHHHHHHHHhC
Confidence            99999999874

>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Pyrococcus abyssi [TaxId: 29292]

Probab=100.00  E-value=2.5e-42  Score=343.30  Aligned_cols=386  Identities=18%  Similarity=0.239  Sum_probs=269.2

Q ss_pred             eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCC--------CCCCCCceEeec
Q 039338           84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDG--------SNNKYPLLHFHE  155 (493)
Q Consensus        84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~  155 (493)
                      ||||+++..|||. ..||+++++..|+++|+++||+|+|+++..................        .......+....
T Consensus         1 MkIl~~~~~~pP~-~~GG~~~~~~~La~~L~~~Gh~V~Vvtp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (437)
T d2bisa1           1 MKVLLLGFEFLPV-KVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYRIG   79 (437)
T ss_dssp             CEEEEECSCCTTC-CSSSHHHHHHHHHHHHHHTTCEEEEEEECTTSSCCEEEEEEECSSSEEEEEEEEEEETTEEEEEEE
T ss_pred             CEEEEECCccCCc-ccCCHHHHHHHHHHHHHHcCCEEEEEecCCCccchhhccceeecccccceeeeeeccCCeEEEecC
Confidence            9999999999873 4699999999999999999999999997655422211111000000        000000011110


Q ss_pred             CCC----Cccc--c-----------ccchHHHHHHh-cCCCCcEEEeCccchh--H-H--hhhccCcEEEEeccchhhhh
Q 039338          156 GEA----DKWR--Y-----------SKGWEQFDEEN-QREPFDVVHSESVALP--H-W--LARNVTNLAVSWHGIALESL  212 (493)
Q Consensus       156 ~~~----~~~~--~-----------~~~~~~~~~~~-~~~~~DiI~~~~~~~~--~-~--~~~~~p~~v~~~h~~~~~~~  212 (493)
                      ...    ..+.  .           ......+.... ....|||||+|+....  . +  ...++| +++++|+......
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pDiIh~~~~~~~~~~~~~~~~~~~~-~v~~~h~~~~~~~  158 (437)
T d2bisa1          80 GGLLDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLREEPLPDVVHFHDWHTVFAGALIKKYFKIP-AVFTIHRLNKSKL  158 (437)
T ss_dssp             SSGGGCSCTTCSHHHHHHHHHHHHHHHHHHHHHHHTTSSCCCSEEEEETGGGHHHHHHHHHHHCCC-EEEEESSCCCCCE
T ss_pred             ccccccccccccchhhHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECChhhhhHhhhhhccccCc-eeEEEeecccccc
Confidence            000    0000  0           00011122222 2456899999875321  1 1  123456 9999999765443


Q ss_pred             hhhhhhhhhcCCCCccchHhHhHHHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccC
Q 039338          213 QSGIFQDLTRKPLEPMSLAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGV  292 (493)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~  292 (493)
                      ...............    +        .....+......+|.+++.+..........++....++.+++||+|.+.+.+
T Consensus       159 ~~~~~~~~~~~~~~~----~--------~~~~~~~~~~~~~d~v~~~~~~~~~~~~~~~~~~~~ki~vi~~g~d~~~~~~  226 (437)
T d2bisa1         159 PAFYFHEAGLSELAP----Y--------PDIDPEHTGGYIADIVTTVSRGYLIDEWGFFRNFEGKITYVFNGIDCSFWNE  226 (437)
T ss_dssp             EHHHHHHTTCGGGCC----S--------SEECHHHHHHHHSSEEEESCHHHHHHTHHHHGGGTTTEEECCCCCCTTTSCG
T ss_pred             chhhhhhccchhhhh----H--------HHHHHHHHHHHhhhhhcccchhhhhhhhhhhccccCceEEEecccccccccc
Confidence            322222111000000    0        0001112344568999999998887766666667789999999999988765


Q ss_pred             Ccc------cchhhhhhhCCCCCCcEEEEEeccccc-ccChHHHHHHHHHHHhh--CCCeEEEEEeCCCcHHH--Hhh--
Q 039338          293 DLS------LGQSFRSRIGIPKNASLVLGVAGRLVK-DKGHPLLHEAFSKLMVK--YPDVYLIVAGSGPWEQR--YKD--  359 (493)
Q Consensus       293 ~~~------~~~~~r~~~~i~~~~~~~i~~~Gr~~~-~Kg~~~ll~a~~~l~~~--~~~~~l~i~G~g~~~~~--~~~--  359 (493)
                      ...      ....+++++++.++  .+++++|++.. .||++.+++|+..+..+  .++++|+++|.|+....  .+.  
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~--~~i~~~G~~~~~~Kg~~~ll~a~~~~~~~~~~~~~~lvi~G~~~~~~~~~~~~~~  304 (437)
T d2bisa1         227 SYLTGSRDERKKSLLSKFGMDEG--VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLE  304 (437)
T ss_dssp             GGCCSCHHHHHHHHHHHTTCCSC--EEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGGEEEEEECCBCHHHHHHHHHHH
T ss_pred             cccchhhHHHHHhhhhhhhccCC--ceEEEeecccccchhHHHHHhhhcccccccccccceeeeecccccccccchhhhc
Confidence            322      12345667776544  67889999974 79999999999988543  47899999998864322  222  


Q ss_pred             --hcCcEEEecCCCHHHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCccceeeeCcceEEECC-CHH
Q 039338          360 --FGHQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAP-NVE  436 (493)
Q Consensus       360 --l~~~V~~~g~~~~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~~-d~~  436 (493)
                        ..+.+.+.|.++++++..+++.||++++||. .|++|++++|||+||+|||+++.||.. |++.+ ++|+++++ |++
T Consensus       305 ~~~~~~~~~~~~~~~~~~~~~~~~adi~v~~s~-~e~~~~~~~Eama~G~Pvi~~~~g~~~-e~i~~-~~G~~~~~~d~~  381 (437)
T d2bisa1         305 EKHGNVKVITEMLSREFVRELYGSVDFVIIPSY-FEPFGLVALEAMCLGAIPIASAVGGLR-DIITN-ETGILVKAGDPG  381 (437)
T ss_dssp             HTCTTEEEECSCCCHHHHHHHHTTCSEEEECCS-CCSSCHHHHHHHTTTCEEEEESCTTHH-HHCCT-TTCEEECTTCHH
T ss_pred             cccccceeccccCcHHHHHHHHhhhcccccccc-ccccchHHHHHHHCCCCEEEeCCCCcH-HhEEC-CcEEEECCCCHH
Confidence              2367788899999999999999999999996 599999999999999999999999988 77664 68999999 999


Q ss_pred             HHHHHHHHHHHcCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhccc
Q 039338          437 SLHKTLEAAVSEGPMRLAQRGEACRQYAASMFTANKMALAYERLFLCIKNETF  489 (493)
Q Consensus       437 ~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~i~~~~~  489 (493)
                      +++++|.++++++++.+++|++++++.+++ |||++++++|+++|++++++.+
T Consensus       382 ~la~~i~~ll~~~~~~~~~~~~~~~~~~~~-~s~~~~a~~~~~iY~~~i~r~~  433 (437)
T d2bisa1         382 ELANAILKALELSRSDLSKFRENCKKRAMS-FSWEKSAERYVKAYTGSIDRAF  433 (437)
T ss_dssp             HHHHHHHHHHTTTTSCTHHHHHHHHHHHHH-SCHHHHHHHHHHHHHTCSCCBC
T ss_pred             HHHHHHHHHHhCCHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHhHh
Confidence            999999999985588999999999999865 9999999999999999998765

>d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Lipopolysaccharide core biosynthesis protein RfaG
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=8.3e-39  Score=309.93  Aligned_cols=356  Identities=17%  Similarity=0.190  Sum_probs=249.4

Q ss_pred             EEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCCCc-cccc
Q 039338           86 IAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEADK-WRYS  164 (493)
Q Consensus        86 Il~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  164 (493)
                      |++++..|.|   .||+++++..|+++|+++||+|+|+|.....  ..           ......+......... ....
T Consensus         2 i~f~~~~y~p---~GG~e~~~~~la~~L~~~G~~V~v~~~~~~~--~~-----------~~~~~~~~~~~~~~~~~~~~~   65 (370)
T d2iw1a1           2 VAFCLYKYFP---FGGLQRDFMRIASTVAARGHHVRVYTQSWEG--DC-----------PKAFELIQVPVKSHTNHGRNA   65 (370)
T ss_dssp             EEEECSEECT---TCHHHHHHHHHHHHHHHTTCCEEEEESEECS--CC-----------CTTCEEEECCCCCSSHHHHHH
T ss_pred             EEEEecCCCC---CCCHHHHHHHHHHHHHHCCCEEEEEecCCCC--CC-----------CCceEEEEcCccccccchhhH
Confidence            7888876643   4999999999999999999999999865433  10           0111111111111111 1112


Q ss_pred             cchHHHHHHhcCCCCcEEEeCccchhHHhhhccCcEEEEeccchhhhhhhhhhhhhhcCCCCccchHhHhHHHHHHHHHH
Q 039338          165 KGWEQFDEENQREPFDVVHSESVALPHWLARNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQGVMLKVL  244 (493)
Q Consensus       165 ~~~~~~~~~~~~~~~DiI~~~~~~~~~~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (493)
                      .....+...++..++|+||.+......        .+...++...............         .+ ...........
T Consensus        66 ~~~~~~~~~~~~~~~d~v~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~---------~~-~~~~~~~~~~~  127 (370)
T d2iw1a1          66 EYYAWVQNHLKEHPADRVVGFNKMPGL--------DVYFAADVCYAEKVAQEKGFLY---------RL-TSRYRHYAAFE  127 (370)
T ss_dssp             HHHHHHHHHHHHSCCSEEEESSCCTTC--------SEEECCSCCHHHHHHHHCCHHH---------HT-SHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhcccceeeecccCchH--------HHHHHhhcccceeeeeecCccc---------cc-cchhchhHHHH
Confidence            223444555567899999987542111        1111111110000000000000         00 00000001111


Q ss_pred             HHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccC--CcccchhhhhhhCCCCCCcEEEEEeccccc
Q 039338          245 NEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGV--DLSLGQSFRSRIGIPKNASLVLGVAGRLVK  322 (493)
Q Consensus       245 ~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~--~~~~~~~~r~~~~i~~~~~~~i~~~Gr~~~  322 (493)
                      ........++.+++.++...+.+.+.++.+.+++.+++||+|.+.+.+  .+..++..|..++++.++ .+++++||+.+
T Consensus       128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vi~~gv~~~~~~~~~~~~~~~~~r~~~~~~~~~-~~i~~~gr~~~  206 (370)
T d2iw1a1         128 RATFEQGKSTKLMMLTDKQIADFQKHYQTEPERFQILPPGIYPDRKYSEQIPNSREIYRQKNGIKEQQ-NLLLQVGSDFG  206 (370)
T ss_dssp             HHHHSTTCCCEEEESCHHHHHHHHHHHCCCGGGEEECCCCCCGGGSGGGSCTTHHHHHHHHTTCCTTC-EEEEEECSCTT
T ss_pred             HHHHhhccCceEEEecHHHHHHHHHhcCCCcceEEEEEeecccccccccCchhhhhhhhhccCCCccc-eEEEEEecccc
Confidence            111123457889999999999888888988999999999999876543  334456788999998877 77889999999


Q ss_pred             ccChHHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhh----hc--CcEEEecCCCHHHHHHHHHHcCEEEeCCCCCCCCC
Q 039338          323 DKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKD----FG--HQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLD  396 (493)
Q Consensus       323 ~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~----l~--~~V~~~g~~~~~~~~~~~~~adv~v~ps~~~eg~~  396 (493)
                      .||++.+++|++.+.++.++..+.++|.++..+.+++    ++  +++.|+|+.  +++.++|++||++|+||. .|++|
T Consensus       207 ~Kg~~~li~a~~~l~~~~~~~~~~ii~g~~~~~~~~~~~~~~~~~~~v~~~g~~--~~~~~~~~~adv~v~ps~-~E~~~  283 (370)
T d2iw1a1         207 RKGVDRSIEALASLPESLRHNTLLFVVGQDKPRKFEALAEKLGVRSNVHFFSGR--NDVSELMAAADLLLHPAY-QEAAG  283 (370)
T ss_dssp             TTTHHHHHHHHHTSCHHHHHTEEEEEESSSCCHHHHHHHHHHTCGGGEEEESCC--SCHHHHHHHCSEEEECCS-CCSSC
T ss_pred             ccchhhhcccccccccccccceeeeccccccccccccccccccccccccccccc--cccccccccccccccccc-ccccc
Confidence            9999999999999988777777777776554444333    22  789999987  689999999999999996 49999


Q ss_pred             hHHHHHHHcCCcEEecCCCCCccceeeeCcceEEE-CC-CHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHhcCHHHHH
Q 039338          397 LTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMF-AP-NVESLHKTLEAAVSEGPMRLAQRGEACRQYAASMFTANKMA  474 (493)
Q Consensus       397 ~~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~-~~-d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~  474 (493)
                      ++++|||+||+|||+++.||.+ |++.++.+|+++ ++ |+++++++|.++++| ++.+++|+++|++++++ |++..+.
T Consensus       284 ~~~~EAma~G~PvI~s~~~g~~-e~i~~~~~G~l~~~~~d~~~la~~i~~ll~d-~~~~~~~~~~ar~~~~~-~~~~~~~  360 (370)
T d2iw1a1         284 IVLLEAITAGLPVLTTAVCGYA-HYIADANCGTVIAEPFSQEQLNEVLRKALTQ-SPLRMAWAENARHYADT-QDLYSLP  360 (370)
T ss_dssp             HHHHHHHHHTCCEEEETTSTTT-HHHHHHTCEEEECSSCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHH-SCCSCHH
T ss_pred             ceeeecccCCeeEEEeCCCChH-HHhcCCCceEEEcCCCCHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHH-hChhHHH
Confidence            9999999999999999999998 899999999776 56 999999999999999 99999999999999976 6776677


Q ss_pred             HHHHHHHH
Q 039338          475 LAYERLFL  482 (493)
Q Consensus       475 ~~~~~~~~  482 (493)
                      +++.++|+
T Consensus       361 ~~~~~ii~  368 (370)
T d2iw1a1         361 EKAADIIT  368 (370)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHh
Confidence            77777764

>d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Pyrococcus abyssi [TaxId: 29292]

Probab=99.95  E-value=7e-27  Score=204.54  Aligned_cols=180  Identities=23%  Similarity=0.378  Sum_probs=150.2

Q ss_pred             CccCCCccCCc------ccchhhhhhhCCCCCCcEEEEEecccc-cccChHHHHHHHHHHHhh--CCCeEEEEEeCCCcH
Q 039338          284 GINENEYGVDL------SLGQSFRSRIGIPKNASLVLGVAGRLV-KDKGHPLLHEAFSKLMVK--YPDVYLIVAGSGPWE  354 (493)
Q Consensus       284 gvd~~~~~~~~------~~~~~~r~~~~i~~~~~~~i~~~Gr~~-~~Kg~~~ll~a~~~l~~~--~~~~~l~i~G~g~~~  354 (493)
                      |||.+.|.+..      .....+++++|++++  .+|+|+||+. ++||++.++++++.+.++  .++++|+++|.|+..
T Consensus         1 gid~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~il~~Grl~~~~Kg~~~li~a~~~l~~~~~~~~~~l~i~G~g~~~   78 (196)
T d2bfwa1           1 GIDCSFWNESYLTGSRDERKKSLLSKFGMDEG--VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPE   78 (196)
T ss_dssp             CCCTTTSSGGGSCSCHHHHHHHHHHHTTCCSC--EEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGGEEEEEECCBCHH
T ss_pred             CcChhhcCCCCCCchhHHHHHHHHHHhCCCCC--CEEEEEcCCCccccCHHHHHHHHHhhhcccCCCCeEEEEEeecccc
Confidence            78888886543      234557789999644  5678999997 589999999999999643  478999999987532


Q ss_pred             --HHHh----hhcCcEEEecCCCHHHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCccceeeeCcce
Q 039338          355 --QRYK----DFGHQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFG  428 (493)
Q Consensus       355 --~~~~----~l~~~V~~~g~~~~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G  428 (493)
                        ...+    .+...+.+.|.++.+++..+|+.||++|+||. .|++|++++|||+||+|||+++.++.. |++. +.+|
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~di~v~ps~-~e~~~~~~~Eam~~G~pvI~~~~~~~~-e~i~-~~~g  155 (196)
T d2bfwa1          79 LEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDFVIIPSY-FEPFGLVALEAMCLGAIPIASAVGGLR-DIIT-NETG  155 (196)
T ss_dssp             HHHHHHHHHHHCTTEEEECSCCCHHHHHHHHTTCSEEEECCS-CCSSCHHHHHHHHTTCEEEEESCHHHH-HHCC-TTTC
T ss_pred             hhhhhhhhhhccceeEEeeeccccccchhccccccccccccc-cccccccchhhhhcCceeeecCCCccc-eeec-CCce
Confidence              2222    22367778899999999999999999999996 599999999999999999999999988 7664 5689


Q ss_pred             EEECC-CHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHhcC
Q 039338          429 FMFAP-NVESLHKTLEAAVSEGPMRLAQRGEACRQYAASMFT  469 (493)
Q Consensus       429 ~~~~~-d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs  469 (493)
                      +++++ |+++++++|.++++.+++.+.+++++|++++++ ||
T Consensus       156 ~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~a~~~a~~-fs  196 (196)
T d2bfwa1         156 ILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMS-FS  196 (196)
T ss_dssp             EEECTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH-TC
T ss_pred             eeECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh-CC
Confidence            99999 999999999999985588999999999999876 76

>d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: First mannosyl transferase WbaZ
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.92  E-value=7.2e-25  Score=186.00  Aligned_cols=141  Identities=24%  Similarity=0.299  Sum_probs=118.8

Q ss_pred             EEEecccccccChHHHHHHHHHHHhhCCCeEEEEEeCCCcH---HHH----hh-hcCcEEEecCCCHHHHHHHHHHcCEE
Q 039338          314 LGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWE---QRY----KD-FGHQVLVMGSMSPAELRAFYNAIDIF  385 (493)
Q Consensus       314 i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~---~~~----~~-l~~~V~~~g~~~~~~~~~~~~~adv~  385 (493)
                      ++|+||+.+.||++.+++|++++    ++.+++++|.+...   +.+    .+ ..++|+|+|+++.+++.++|+.||++
T Consensus        15 ~l~iGrl~~~K~~~~~i~a~~~l----~~~~l~ivg~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~   90 (166)
T d2f9fa1          15 WLSVNRIYPEKRIELQLEVFKKL----QDEKLYIVGWFSKGDHAERYARKIMKIAPDNVKFLGSVSEEELIDLYSRCKGL   90 (166)
T ss_dssp             EEEECCSSGGGTHHHHHHHHHHC----TTSCEEEEBCCCTTSTHHHHHHHHHHHSCTTEEEEESCCHHHHHHHHHHCSEE
T ss_pred             EEEEecCccccCHHHHHHHHHHh----cCCeEEEEEecccccchhhhhhhhcccccCcEEEeeccccccccccccccccc
Confidence            55999999999999999999888    57789999975432   222    22 23899999999999999999999999


Q ss_pred             EeCCCCCCCCChHHHHHHHcCCcEEecCCCCCccceeeeCcceEEECCCHHHHHHHHHHHHHcCcHHHHHHHHHH
Q 039338          386 VNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAPNVESLHKTLEAAVSEGPMRLAQRGEAC  460 (493)
Q Consensus       386 v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~~d~~~l~~~i~~ll~~~~~~~~~~~~~~  460 (493)
                      |+||. .|++|++++|||++|+|||+++.++.. |++.++.+|+++++|+++++++|.++++++...++.+.++|
T Consensus        91 i~ps~-~e~~~~~~~Ea~~~g~pvi~s~~~~~~-e~i~~~~~g~~~~~d~~~~~~~i~~l~~~~~~~~~~~~~~a  163 (166)
T d2f9fa1          91 LCTAK-DEDFGLTPIEAMASGKPVIAVNEGGFK-ETVINEKTGYLVNADVNEIIDAMKKVSKNPDKFKKDCFRRA  163 (166)
T ss_dssp             EECCS-SCCSCHHHHHHHHTTCCEEEESSHHHH-HHCCBTTTEEEECSCHHHHHHHHHHHHHCTTTTHHHHHHHH
T ss_pred             ccccc-cccccccccccccccccceeecCCcce-eeecCCcccccCCCCHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence            99996 599999999999999999999999988 89999999998877999999999999999333333333333

>d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Trehalose-6-phosphate synthase, OtsA
domain: Trehalose-6-phosphate synthase, OtsA
species: Escherichia coli [TaxId: 562]

Probab=99.92  E-value=6.5e-24  Score=208.68  Aligned_cols=275  Identities=15%  Similarity=0.165  Sum_probs=200.1

Q ss_pred             CCcEEEeCccc---hhHHhhhccC--cEEEEeccchhhhhhhhhhhhhhcCCCCccchHhHhHHHHHHHHHHHHHHhhcc
Q 039338          178 PFDVVHSESVA---LPHWLARNVT--NLAVSWHGIALESLQSGIFQDLTRKPLEPMSLAFNKSLQGVMLKVLNEIRFFNK  252 (493)
Q Consensus       178 ~~DiI~~~~~~---~~~~~~~~~p--~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (493)
                      .-|+|++|++.   ++.++....|  ++...+|..++..   +.+..+              ...+.+      ...+-.
T Consensus       122 ~~d~iwvhDyhl~llp~~lR~~~~~~~i~~flH~pfP~~---~~fr~l--------------p~~~~i------l~~ll~  178 (456)
T d1uqta_         122 DDDIIWIHDYHLLPFAHELRKRGVNNRIGFFLHIPFPTP---EIFNAL--------------PTYDTL------LEQLCD  178 (456)
T ss_dssp             TTCEEEEESGGGTTHHHHHHHTTCCSCEEEECCSCCCCH---HHHTTS--------------TTHHHH------HHHHTT
T ss_pred             CCCeEEEeccchhhhHHHHHHhCCCCcEEEEeCCCCCCh---HHhccC--------------cchHHH------HHHhhc
Confidence            34899998763   4444444333  3888889865421   111111              001111      123457


Q ss_pred             CCeEEEcChhHHHHHHHH----hCC------------CCCcEEEecCCccCCCccCCcc-----cchhhhhhhCCCCCCc
Q 039338          253 YAHHVAISDSCGEMLRDV----YQI------------PSERVHVILNGINENEYGVDLS-----LGQSFRSRIGIPKNAS  311 (493)
Q Consensus       253 ~d~ii~~S~~~~~~~~~~----~~~------------~~~~v~vi~ngvd~~~~~~~~~-----~~~~~r~~~~i~~~~~  311 (493)
                      +|.|...+......+.+.    .+.            ...++.++|+|+|.+.+.....     ....++.++   .+. 
T Consensus       179 ~d~igf~~~~~~~~fl~~~~~ll~~~~~~~~~i~~~gr~v~v~~~p~GID~~~~~~~~~~~~~~~~~~l~~~~---~~~-  254 (456)
T d1uqta_         179 YDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHTAWGKAFRTEVYPIGIEPKEIAKQAAGPLPPKLAQLKAEL---KNV-  254 (456)
T ss_dssp             SSEEEESSHHHHHHHHHHHHHHSCEEEETTTEEEETTEEEEEEECCCCCCHHHHHHHHHSCCCHHHHHHHHHT---TTC-
T ss_pred             cccccccCHHHHHHHHHHHHHHhCcccccCCeEEecCceeeeeeecCcccchhhhhhcccHHHHHHHHHHHhc---CCC-
Confidence            888888887776655431    111            1236789999999887743211     112223332   233 


Q ss_pred             EEEEEecccccccChHHHHHHHHHHHhhCCC----eEEEEEeCCCcH---------HHHhhh-------------cCcEE
Q 039338          312 LVLGVAGRLVKDKGHPLLHEAFSKLMVKYPD----VYLIVAGSGPWE---------QRYKDF-------------GHQVL  365 (493)
Q Consensus       312 ~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~----~~l~i~G~g~~~---------~~~~~l-------------~~~V~  365 (493)
                      .+|+++||+++.||++.+++|+.++.+++|+    +.++.+|.+...         ..+.++             .+.+.
T Consensus       255 ~~il~V~Rld~~KGi~~~l~A~~~~l~~~p~~~~~v~lv~~~~~~~~~~~~~~~~~~ev~~lv~~in~~~~~~~~~~~v~  334 (456)
T d1uqta_         255 QNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYY  334 (456)
T ss_dssp             EEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEECCBCSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCSEEE
T ss_pred             eEEEEeCCCchhhchHHHHHHHHHHHHhCccccccEEEEEEcCCcccchHHHHHHHHHHHHHHHHHHhhhccCCCCceee
Confidence            7788999999999999999999999988764    667777754321         111111             26688


Q ss_pred             EecCCCHHHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcCCc-----EEecCCCCCccceeeeCcceEEECC-CHHHHH
Q 039338          366 VMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKP-----VMASRFPSIKGTIVVDDEFGFMFAP-NVESLH  439 (493)
Q Consensus       366 ~~g~~~~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G~P-----vI~s~~~~~~~e~v~~~~~G~~~~~-d~~~l~  439 (493)
                      +.+.++.+++..+|+.||++++||.+ ||+|++++|||+||+|     +|+|+.+|.. +.+.   .|++++| |+++++
T Consensus       335 ~~~~~~~~~l~a~~~~Adv~v~~s~~-EG~~lv~~Ea~a~~~p~~~g~lIlS~~~G~~-~~l~---~g~lVnP~d~~~~A  409 (456)
T d1uqta_         335 LNQHFDRKLLMKIFRYSDVGLVTPLR-DGMNLVAKEYVAAQDPANPGVLVLSQFAGAA-NELT---SALIVNPYDRDEVA  409 (456)
T ss_dssp             ECSCCCHHHHHHHHHHCSEEEECCSS-BSCCHHHHHHHHHSCTTSCCEEEEETTBGGG-GTCT---TSEEECTTCHHHHH
T ss_pred             ccCCcCHHHHhHHHhhhceeecCCcc-CCCCcHHHHHHHhCCCCCCCcEEEeCCCCCH-HHhC---CeEEECcCCHHHHH
Confidence            99999999999999999999999976 9999999999999999     9999999998 5553   4899999 999999


Q ss_pred             HHHHHHHHcCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHh
Q 039338          440 KTLEAAVSEGPMRLAQRGEACRQYAASMFTANKMALAYERLFLCIK  485 (493)
Q Consensus       440 ~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~~~~i~  485 (493)
                      ++|.+++.+++++++++.+++++++.+ ||....++.+.+-++++.
T Consensus       410 ~ai~~aL~~~~~er~~~~~~~~~~v~~-~~~~~W~~~fl~~l~~~~  454 (456)
T d1uqta_         410 AALDRALTMSLAERISRHAEMLDVIVK-NDINHWQECFISDLKQIV  454 (456)
T ss_dssp             HHHHHHHTCCHHHHHHHHHHHHHHHHH-TCHHHHHHHHHHHHHHSC
T ss_pred             HHHHHHHcCCHHHHHHHHHHHHHHHHH-CCHHHHHHHHHHHHHhhc
Confidence            999999998788999999999999987 899999999988888754

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=99.43  E-value=2.4e-12  Score=121.66  Aligned_cols=317  Identities=14%  Similarity=0.061  Sum_probs=170.2

Q ss_pred             EEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCC----C-
Q 039338           85 KIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEA----D-  159 (493)
Q Consensus        85 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-  159 (493)
                      ||++.+.      ..||+-..+..++++|.++||||.+++.....  .  .+.      .......+.......    . 
T Consensus         2 kili~~~------GtGGHv~~a~al~~~L~~~G~eV~~i~~~~~~--~--~~~------~~~~~~~~~~~~~~~~~~~~~   65 (351)
T d1f0ka_           2 RLMVMAG------GTGGHVFPGLAVAHHLMAQGWQVRWLGTADRM--E--ADL------VPKHGIEIDFIRISGLRGKGI   65 (351)
T ss_dssp             EEEEECC------SSHHHHHHHHHHHHHHHTTTCEEEEEECTTST--H--HHH------GGGGTCEEEECCCCCCTTCCH
T ss_pred             EEEEEcC------CcHHHHHHHHHHHHHHHhCCCEEEEEEeCCcc--h--hhc------ccccCCcEEEEECCCcCCCCH
Confidence            7888874      33688888999999999999999998865432  0  011      000111112211110    0 


Q ss_pred             ------ccccccchHHHHHHhcCCCCcEEEeCccc--hhH---HhhhccCcEEEEeccchhhhhhhhhhhhhhcCCCCcc
Q 039338          160 ------KWRYSKGWEQFDEENQREPFDVVHSESVA--LPH---WLARNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPM  228 (493)
Q Consensus       160 ------~~~~~~~~~~~~~~~~~~~~DiI~~~~~~--~~~---~~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~  228 (493)
                            .............++.+.++|++.+....  ...   .....+| .+...++.....                 
T Consensus        66 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~a~~~~ip-~~~~~~~~~~~~-----------------  127 (351)
T d1f0ka_          66 KALIAAPLRIFNAWRQARAIMKAYKPDVVLGMGGYVSGPGGLAAWSLGIP-VVLHEQNGIAGL-----------------  127 (351)
T ss_dssp             HHHHTCHHHHHHHHHHHHHHHHHHCCSEEEECSSTTHHHHHHHHHHTTCC-EEEEECSSSCCH-----------------
T ss_pred             HHHHHHHHHHHHhHHHHHHHhhccccceeeecccchhhhhhhhhhhcccc-eeecccccccch-----------------
Confidence                  11112223344455567789998875332  111   2224556 555444422110                 


Q ss_pred             chHhHhHHHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCCCC
Q 039338          229 SLAFNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPK  308 (493)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~  308 (493)
                             ..    +     .....++.+.....           ........+.++.........     ..+.+.....
T Consensus       128 -------~~----~-----~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~  175 (351)
T d1f0ka_         128 -------TN----K-----WLAKIATKVMQAFP-----------GAFPNAEVVGNPVRTDVLALP-----LPQQRLAGRE  175 (351)
T ss_dssp             -------HH----H-----HHTTTCSEEEESST-----------TSSSSCEECCCCCCHHHHTSC-----CHHHHHTTCC
T ss_pred             -------hH----H-----Hhhhhcceeecccc-----------ccccceeEEcCCcccccccch-----hHHhhhhccc
Confidence                   00    0     11223343333211           112233344444332222111     1122333344


Q ss_pred             CCcEEEEEecccccccChHHHHHHHHHHHhhCCCeEEEEEeCCCcH-H----HHhhhcCcEEEecCCCHHHHHHHHHHcC
Q 039338          309 NASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWE-Q----RYKDFGHQVLVMGSMSPAELRAFYNAID  383 (493)
Q Consensus       309 ~~~~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~-~----~~~~l~~~V~~~g~~~~~~~~~~~~~ad  383 (493)
                      +...++++.|......-.+.+.+.+..+..   ....++.+..... .    .......++...++.  +++.++|+.||
T Consensus       176 ~~~~i~~~~gs~g~~~~~~~~~~~~~~l~~---~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~f~--~~~~~lm~~ad  250 (351)
T d1f0ka_         176 GPVRVLVVGGSQGARILNQTMPQVAAKLGD---SVTIWHQSGKGSQQSVEQAYAEAGQPQHKVTEFI--DDMAAAYAWAD  250 (351)
T ss_dssp             SSEEEEEECTTTCCHHHHHHHHHHHHHHGG---GEEEEEECCTTCHHHHHHHHHHTTCTTSEEESCC--SCHHHHHHHCS
T ss_pred             CCcccccccccchhhhhHHHHHHhhhhhcc---cceeeeeccccchhhhhhhhcccccccceeeeeh--hhHHHHHHhCc
Confidence            443444455554433333455555555543   2333444433221 1    122234788899998  58999999999


Q ss_pred             EEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCcc------ceeeeCcceEEECC---CHHHHHHHHHHHHHcCcHHHH
Q 039338          384 IFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKG------TIVVDDEFGFMFAP---NVESLHKTLEAAVSEGPMRLA  454 (493)
Q Consensus       384 v~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~------e~v~~~~~G~~~~~---d~~~l~~~i~~ll~~~~~~~~  454 (493)
                      ++|.     .+-+.++.|++++|+|+|....+...+      +.+++.+.|+.++.   +.+.+.++|..+  + ++.+.
T Consensus       251 l~It-----~~G~~T~~Eal~~g~P~I~iP~~~~~~~Q~~NA~~l~~~G~~~~~~~~~~~~e~l~~~l~~l--~-~~~~~  322 (351)
T d1f0ka_         251 VVVC-----RSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKAGAAKIIEQPQLSVDAVANTLAGW--S-RETLL  322 (351)
T ss_dssp             EEEE-----CCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHTTSEEECCGGGCCHHHHHHHHHTC--C-HHHHH
T ss_pred             hhhc-----cccchHHHHHHHhCCceeeeecccCCchHHHHHHHHHHCCCEEEechhhCCHHHHHHHHHhh--C-HHHHH
Confidence            9995     233579999999999999876543221      24566678888874   578888887775  3 66778


Q ss_pred             HHHHHHHHHHHHhcCHHHHHHHHHHHH
Q 039338          455 QRGEACRQYAASMFTANKMALAYERLF  481 (493)
Q Consensus       455 ~~~~~~~~~~~~~fs~~~~~~~~~~~~  481 (493)
                      +|++++++.... ..++++++.++++-
T Consensus       323 ~~~~~~~~~~~~-~~a~~i~~~i~~l~  348 (351)
T d1f0ka_         323 TMAERARAASIP-DATERVANEVSRVA  348 (351)
T ss_dssp             HHHHHHHHTCCT-THHHHHHHHHHHHH
T ss_pred             HHHHHHHccCCc-cHHHHHHHHHHHHH
Confidence            898888865433 24566666666554

>d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: TDP-vancosaminyltransferase GftD
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=99.27  E-value=5.6e-11  Score=114.08  Aligned_cols=127  Identities=13%  Similarity=0.056  Sum_probs=82.7

Q ss_pred             CcEEEEEecccccccChHHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhhhcCcEEEecCCCHHHHHHHHHHcCEEEeCC
Q 039338          310 ASLVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDFGHQVLVMGSMSPAELRAFYNAIDIFVNPT  389 (493)
Q Consensus       310 ~~~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~l~~~V~~~g~~~~~~~~~~~~~adv~v~ps  389 (493)
                      .+.++++.|....... ..+.+.+.......+...+++.|..  ......+.+||.+.+++|+.+   ++..+|++|.  
T Consensus       237 ~~~v~~~~gs~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~v~~~~~~p~~~---ll~~~~~~I~--  308 (401)
T d1rrva_         237 SPPVHIGFGSSSGRGI-ADAAKVAVEAIRAQGRRVILSRGWT--ELVLPDDRDDCFAIDEVNFQA---LFRRVAAVIH--  308 (401)
T ss_dssp             SCCEEECCTTCCSHHH-HHHHHHHHHHHHHTTCCEEEECTTT--TCCCSCCCTTEEEESSCCHHH---HGGGSSEEEE--
T ss_pred             CCeEEEECCccccCCH-HHHHHHHHHHHhhcCCeEEEecccc--ccccccCCCCEEEEeccCcHH---HhhhccEEEe--
Confidence            3356667776654332 2333333333333233333333322  222334568999999998654   5678999995  


Q ss_pred             CCCCCCChHHHHHHHcCCcEEecCCCC----CccceeeeCcceEEECC---CHHHHHHHHHHHHHc
Q 039338          390 LRPQGLDLTLMEAMMSGKPVMASRFPS----IKGTIVVDDEFGFMFAP---NVESLHKTLEAAVSE  448 (493)
Q Consensus       390 ~~~eg~~~~~~EAm~~G~PvI~s~~~~----~~~e~v~~~~~G~~~~~---d~~~l~~~i~~ll~~  448 (493)
                         .|..+++.||+++|+|+|+....+    .. +.+++.+.|..++.   +++.|.++|.+++++
T Consensus       309 ---hgG~~t~~Eal~~GvP~l~~P~~~DQ~~na-~~v~~~G~g~~l~~~~~~~~~L~~ai~~vl~~  370 (401)
T d1rrva_         309 ---HGSAGTEHVATRAGVPQLVIPRNTDQPYFA-GRVAALGIGVAHDGPTPTFESLSAALTTVLAP  370 (401)
T ss_dssp             ---CCCHHHHHHHHHHTCCEEECCCSBTHHHHH-HHHHHHTSEEECSSSCCCHHHHHHHHHHHTSH
T ss_pred             ---cCCchHHHHHHHhCCCEEEecccccHHHHH-HHHHHCCCEEEcCcCCCCHHHHHHHHHHHhCH
Confidence               355679999999999999987655    12 34566778998876   589999999999843

>d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: TDP-epi-vancosaminyltransferase GtfA
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=99.22  E-value=1e-10  Score=111.75  Aligned_cols=125  Identities=15%  Similarity=0.149  Sum_probs=80.6

Q ss_pred             EEEEEecccccccChHHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhhhcCcEEEecCCCHHHHHHHHHHcCEEEeCCCC
Q 039338          312 LVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDFGHQVLVMGSMSPAELRAFYNAIDIFVNPTLR  391 (493)
Q Consensus       312 ~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~l~~~V~~~g~~~~~~~~~~~~~adv~v~ps~~  391 (493)
                      .++...|.... .+...+.+.+....... +.++++.+.+. ........++|.+.|++|+.   .++..+|++|..+  
T Consensus       223 ~v~~~~~~~~~-~~~~~~~~~~~~~l~~~-~~~~~~~~~~~-~~~~~~~~~~v~i~~~~p~~---~ll~~a~~~v~hg--  294 (391)
T d1pn3a_         223 PVYVGFGSSSR-PATADAAKMAIKAVRAS-GRRIVLSRGWA-DLVLPDDGADCFVVGEVNLQ---ELFGRVAAAIHHD--  294 (391)
T ss_dssp             CEEEECTTCCS-THHHHHHHHHHHHHHHT-TCCEEEECTTT-TCCCSSCCTTCCEESSCCHH---HHHTTSSCEEEES--
T ss_pred             eEEEecccccc-ccHHHHHHHHHHHHHhc-CCEEEEecccc-ccccccCCCCEEEecccCHH---HHHhhccEEEecC--
Confidence            45545555433 33333333333322222 34444444322 22223345899999999755   5578899999643  


Q ss_pred             CCCCChHHHHHHHcCCcEEecCCCCC--------ccceeeeCcceEEECC---CHHHHHHHHHHHHHc
Q 039338          392 PQGLDLTLMEAMMSGKPVMASRFPSI--------KGTIVVDDEFGFMFAP---NVESLHKTLEAAVSE  448 (493)
Q Consensus       392 ~eg~~~~~~EAm~~G~PvI~s~~~~~--------~~e~v~~~~~G~~~~~---d~~~l~~~i~~ll~~  448 (493)
                        | .+++.|||++|+|+|+....+-        . +.+.+.+.|+.++.   ++++|+++|.+++++
T Consensus       295 --G-~~t~~Eal~~G~P~v~~P~~~d~~~eQ~~nA-~~l~~~G~g~~l~~~~~~~~~l~~~i~~~l~~  358 (391)
T d1pn3a_         295 --S-AGTTLLAMRAGIPQIVVRRVVDNVVEQAYHA-DRVAELGVGVAVDGPVPTIDSLSAALDTALAP  358 (391)
T ss_dssp             --C-HHHHHHHHHHTCCEEEECSSCCBTTBCCHHH-HHHHHHTSEEEECCSSCCHHHHHHHHHHHTST
T ss_pred             --c-hHHHHHHHHhCCcEEEeccccCCcchHHHHH-HHHHHCCCEEEcCcCCCCHHHHHHHHHHHhCH
Confidence              2 4699999999999999876542        2 34566678998876   589999999999854

>d1o6ca_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDP-N-acetylglucosamine 2-epimerase
domain: UDP-N-acetylglucosamine 2-epimerase
species: Bacillus subtilis [TaxId: 1423]

Probab=99.21  E-value=2.5e-10  Score=108.13  Aligned_cols=325  Identities=10%  Similarity=0.006  Sum_probs=178.4

Q ss_pred             CceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhC-CCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCC-C
Q 039338           82 FTLKIAVFSRKWPISTTPGGMERHAHTLHVALARR-GHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEA-D  159 (493)
Q Consensus        82 ~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~-G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  159 (493)
                      ++|||++|+..      ..... .+..+.++|.+. ++++.++.+..+.  +......+.   ... .+.+.+..... .
T Consensus         1 ~k~Ki~~v~Gt------R~e~~-kl~pli~~l~~~~~~~~~li~tG~H~--~~~~~~~~~---~~i-~~~~~~~~~~~~~   67 (377)
T d1o6ca_           1 KKLKVMTVFGT------RPEAI-KMAPLVLELKKYPEIDSYVTVTAQHR--QMLDQVLDA---FHI-KPDFDLNIMKERQ   67 (377)
T ss_dssp             CCEEEEEEECS------HHHHH-HHHHHHHHGGGCTTEEEEEEECCSCG--GGTHHHHHH---TTC-CCSEECCCCCTTC
T ss_pred             CCceEEEEEEc------hHhHH-HHHHHHHHHHhCCCCCEEEEEeCCCH--HHHHHHHhh---cCC-CCceeeecCCCCC
Confidence            58999999962      11112 356789999876 6899999877653  211111111   111 11122111111 1


Q ss_pred             c--cccccchHHHHHHhcCCCCcEEEeCccc---hhHH---hhhccCcEEEEeccchhhhhhhhhhhhhhcCCCCccchH
Q 039338          160 K--WRYSKGWEQFDEENQREPFDVVHSESVA---LPHW---LARNVTNLAVSWHGIALESLQSGIFQDLTRKPLEPMSLA  231 (493)
Q Consensus       160 ~--~~~~~~~~~~~~~~~~~~~DiI~~~~~~---~~~~---~~~~~p~~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (493)
                      .  .........+.+.+.+.+||+|++++-.   +.+.   ...++|  ++++|+-.....              ..   
T Consensus        68 ~~~~~~~~~i~~~~~~~~~~kpD~v~v~GDr~e~la~a~aa~~~~Ip--i~HiegG~~s~~--------------~~---  128 (377)
T d1o6ca_          68 TLAEITSNALVRLDELFKDIKPDIVLVHGDTTTTFAGSLAAFYHQIA--VGHVEAGLRTGN--------------KY---  128 (377)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHHTTCE--EEEESCCCCCSC--------------TT---
T ss_pred             CHHHHHHHHHHhhhhhhhhcccceeEeeecccccchhhhhhhhccce--EEEEeccccccc--------------cc---
Confidence            1  1123344555666678899999998652   2222   223455  455554211000              00   


Q ss_pred             hHhHHHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCCCCCCc
Q 039338          232 FNKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNAS  311 (493)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~  311 (493)
                       ........+...     -+-+|..++.++..++.+.+ .|.++.+++++.+..-..........  .....+.....++
T Consensus       129 -~~~~de~~R~~i-----skls~~hf~~t~~~~~~L~~-~G~~~~~I~~vG~~~~D~i~~~~~~~--~~~~~~~~~~~~~  199 (377)
T d1o6ca_         129 -SPFPEELNRQMT-----GAIADLHFAPTGQAKDNLLK-ENKKADSIFVTGNTAIDALNTTVRDG--YSHPVLDQVGEDK  199 (377)
T ss_dssp             -TTTTHHHHHHHH-----HHHCSEEEESSHHHHHHHHH-TTCCGGGEEECCCHHHHHHHHHCCSS--CCCSTTTTTTTSE
T ss_pred             -ccCchhhhcccc-----ccceeEEeecchhhhhhhhh-hccccceEeeccchhHHHHHHHHHHH--HhhhhhhhccCCc
Confidence             001111222211     23578999999999999998 68888999999885322111000000  0011122223444


Q ss_pred             EEEEEecccccc-cChHHHHHHHHHHHhhCCCeEEEEEeCCCcH--HHHhh-h--cCcEEEecCCCHHHHHHHHHHcCEE
Q 039338          312 LVLGVAGRLVKD-KGHPLLHEAFSKLMVKYPDVYLIVAGSGPWE--QRYKD-F--GHQVLVMGSMSPAELRAFYNAIDIF  385 (493)
Q Consensus       312 ~~i~~~Gr~~~~-Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~--~~~~~-l--~~~V~~~g~~~~~~~~~~~~~adv~  385 (493)
                      +++++.-+.... +.....+.++..+.....++.+++.......  ....+ +  .++|.+...+++.++..+++.|+++
T Consensus       200 ~ilvt~Hr~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ni~~~~~l~~~~fl~llk~s~~v  279 (377)
T d1o6ca_         200 MILLTAHRRENLGEPMENMFKAIRRIVGEFEDVQVVYPVHLNPVVREAAHKHFGDSDRVHLIEPLEVIDFHNFAAKSHFI  279 (377)
T ss_dssp             EEEECC----------HHHHHHHHHHHHHCTTEEEEEC----CHHHHHHHHC--CCSSEEECCCCCHHHHHHHHHHCSEE
T ss_pred             eEEEEeccccccccchHHHHHHHHhhcccccccccccccccccccchhhhhccccccceEeccccchHHHHHHHhhhhee
Confidence            666666655432 3344555666666666667766665432222  12222 2  2789999999999999999999999


Q ss_pred             EeCCCCCCCCChHHHHHHHcCCcEEecCCCCCccceeeeCcceEEECCCHHHHHHHHHHHHHcCcHHHHH
Q 039338          386 VNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAPNVESLHKTLEAAVSEGPMRLAQ  455 (493)
Q Consensus       386 v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~~d~~~l~~~i~~ll~~~~~~~~~  455 (493)
                      +--|      |..+.||-.+|+|+|.-+..+-+.+.+..+ +-++++.|.+++.+++.+++.+ +...+.
T Consensus       280 IgnS------ss~i~Ea~~lg~P~Inir~~tERqe~~~~g-~nilv~~~~~~I~~~i~~~l~~-~~~~~~  341 (377)
T d1o6ca_         280 LTDS------GGVQEEAPSLGKPVLVLRDTTERPEGVEAG-TLKLAGTDEENIYQLAKQLLTD-PDEYKK  341 (377)
T ss_dssp             EEC--------CHHHHGGGGTCCEEEECSCCC---CTTTT-SSEEECSCHHHHHHHHHHHHHC-HHHHHH
T ss_pred             eccc------chhHHhhhhhhceEEEeCCCCcCcchhhcC-eeEECCCCHHHHHHHHHHHHhC-hHHHhh
Confidence            9533      336889999999999886543333444433 5566766999999999999988 555443

>d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDP-N-acetylglucosamine 2-epimerase
domain: UDP-N-acetylglucosamine 2-epimerase
species: Thermus thermophilus [TaxId: 274]

Probab=99.19  E-value=4.9e-10  Score=105.87  Aligned_cols=321  Identities=10%  Similarity=-0.018  Sum_probs=191.6

Q ss_pred             EEEEEeccCCCCCCCCchHHHHHHHHHHHHhC-CCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCCC-ccc
Q 039338           85 KIAVFSRKWPISTTPGGMERHAHTLHVALARR-GHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEAD-KWR  162 (493)
Q Consensus        85 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~-G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  162 (493)
                      ||++++..=      .-.. .+..+.++|.+. ++++.++.+..+.  +...+..... +...+ ..+........ ...
T Consensus         4 kI~~v~GtR------~e~~-kl~pli~~l~~~~~~~~~li~tG~H~--~~~~~~~~~~-~i~~d-~~l~~~~~~~s~~~~   72 (373)
T d1v4va_           4 RVVLAFGTR------PEAT-KMAPVYLALRGIPGLKPLVLLTGQHR--EQLRQALSLF-GIQED-RNLDVMQERQALPDL   72 (373)
T ss_dssp             EEEEEECSH------HHHH-HHHHHHHHHHTSTTEEEEEEECSSCH--HHHHHHHHTT-TCCCS-EECCCCSSCCCHHHH
T ss_pred             eEEEEEEhh------HHHH-HHHHHHHHHHhCCCCCEEEEEccCCh--hhhhCcchhc-CCCcc-ccCCCCCCCCCHHHH
Confidence            699998621      1122 366799999874 7999998887654  2111110000 01100 00111111101 011


Q ss_pred             cccchHHHHHHhcCCCCcEEEeCccc---hhHH---hhhccCcEEEEecc-chhhhhhhhhhhhhhcCCCCccchHhHhH
Q 039338          163 YSKGWEQFDEENQREPFDVVHSESVA---LPHW---LARNVTNLAVSWHG-IALESLQSGIFQDLTRKPLEPMSLAFNKS  235 (493)
Q Consensus       163 ~~~~~~~~~~~~~~~~~DiI~~~~~~---~~~~---~~~~~p~~v~~~h~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (493)
                      .......+.+.+.+.+||+|++++-.   ++..   ...++|  ++++++ .........                   .
T Consensus        73 ~~~~~~~~~~~l~~~kPD~vlv~GDr~e~la~a~aa~~~~ip--i~HiegG~rsg~~~~~-------------------~  131 (373)
T d1v4va_          73 AARILPQAARALKEMGADYVLVHGDTLTTFAVAWAAFLEGIP--VGHVEAGLRSGNLKEP-------------------F  131 (373)
T ss_dssp             HHHHHHHHHHHHHHTTCSEEEEESSCHHHHHHHHHHHHTTCC--EEEETCCCCCSCTTSS-------------------T
T ss_pred             HHHHHHHHhhhhhhcCcccccccccCccchhHHHHHHHhhhh--heeecccccccccccC-------------------c
Confidence            23445566777788899999988642   2222   223566  444444 211100000                   0


Q ss_pred             HHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCccCCCccCCcccchhhhhhhCCCCCCcEEEE
Q 039338          236 LQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGINENEYGVDLSLGQSFRSRIGIPKNASLVLG  315 (493)
Q Consensus       236 ~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngvd~~~~~~~~~~~~~~r~~~~i~~~~~~~i~  315 (493)
                      .....+.     ..-+-++..++.++..++.+.+ .|.++.++.++.+..-......    ....+.....+ .+++.++
T Consensus       132 ~de~~R~-----~iskls~~hf~~t~~~~~~L~~-~Ge~~~~I~~vG~p~~D~i~~~----~~~~~~~~~~~-~~~~~lv  200 (373)
T d1v4va_         132 PEEANRR-----LTDVLTDLDFAPTPLAKANLLK-EGKREEGILVTGQTGVDAVLLA----AKLGRLPEGLP-EGPYVTV  200 (373)
T ss_dssp             THHHHHH-----HHHHHCSEEEESSHHHHHHHHT-TTCCGGGEEECCCHHHHHHHHH----HHHCCCCTTCC-SSCEEEE
T ss_pred             chhhhhh-----hhccccceeeecchhhhhhhhh-hcccccceeecccchhhHHHhh----hhhcccccccc-cccceeE
Confidence            1111111     1123578899999999999988 6888899999887531111100    00111112223 3347777


Q ss_pred             EecccccccChHHHHHHHHHHHhhCCCeEEEEEeCCCcH--HHH-hh--hcCcEEEecCCCHHHHHHHHHHcCEEEeCCC
Q 039338          316 VAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWE--QRY-KD--FGHQVLVMGSMSPAELRAFYNAIDIFVNPTL  390 (493)
Q Consensus       316 ~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~--~~~-~~--l~~~V~~~g~~~~~~~~~~~~~adv~v~ps~  390 (493)
                      +.-+....+....+.+++..+.+...++.+++.......  ... +.  ...++.++..+++.++..+++.|++++--| 
T Consensus       201 t~hr~~n~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~l~ll~~s~~vignS-  279 (373)
T d1v4va_         201 TMHRRENWPLLSDLAQALKRVAEAFPHLTFVYPVHLNPVVREAVFPVLKGVRNFVLLDPLEYGSMAALMRASLLLVTDS-  279 (373)
T ss_dssp             CCCCGGGGGGHHHHHHHHHHHHHHCTTSEEEEECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHTEEEEEESC-
T ss_pred             EeccccccchHHHHHHHHHHHhhhcccceeeeeecccccchhhhhhhhcccccceeeccchHHHHHHHhhhceeEeccc-
Confidence            877777777788888999888888777777665432211  111 11  227899999999999999999999999543 


Q ss_pred             CCCCCChHHHHHHHcCCcEEecCCCCCccceeeeCcceEEECCCHHHHHHHHHHHHHcCcHHHHHH
Q 039338          391 RPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAPNVESLHKTLEAAVSEGPMRLAQR  456 (493)
Q Consensus       391 ~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~~d~~~l~~~i~~ll~~~~~~~~~~  456 (493)
                           |..+.||.++|+|+|.-+..+-+++-+..+ +..++..|.+++.+++.+++.+ ++.+..+
T Consensus       280 -----ssgi~Ea~~lg~P~Inir~~~eRqeg~~~g-~nvlv~~d~~~I~~~i~~~l~~-~~~~~~~  338 (373)
T d1v4va_         280 -----GGLQEEGAALGVPVVVLRNVTERPEGLKAG-ILKLAGTDPEGVYRVVKGLLEN-PEELSRM  338 (373)
T ss_dssp             -----HHHHHHHHHTTCCEEECSSSCSCHHHHHHT-SEEECCSCHHHHHHHHHHHHTC-HHHHHHH
T ss_pred             -----chhhhcchhhcCcEEEeCCCccCHHHHhcC-eeEEcCCCHHHHHHHHHHHHcC-HHHHhhc
Confidence                 458889999999999885544443555544 3455555999999999999988 6555444

>d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: UDP-glucosyltransferase GtfB
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=99.07  E-value=8.5e-10  Score=105.41  Aligned_cols=122  Identities=16%  Similarity=0.156  Sum_probs=79.0

Q ss_pred             EEEEEeccccc-ccChHHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhhhcCcEEEecCCCHHHHHHHHHHcCEEEeCCC
Q 039338          312 LVLGVAGRLVK-DKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDFGHQVLVMGSMSPAELRAFYNAIDIFVNPTL  390 (493)
Q Consensus       312 ~~i~~~Gr~~~-~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~l~~~V~~~g~~~~~~~~~~~~~adv~v~ps~  390 (493)
                      .+++..|.... .+..+.++++++.+    +.-.+++.|..  ........+||.+.+++|+.   ++|..+|++|.   
T Consensus       240 ~i~~~~~~~~~~~~~~~~~~~al~~~----~~~~~~~~~~~--~~~~~~~~~nv~~~~~~p~~---~~l~~~~~~V~---  307 (401)
T d1iira_         240 PVYLGFGSLGAPADAVRVAIDAIRAH----GRRVILSRGWA--DLVLPDDGADCFAIGEVNHQ---VLFGRVAAVIH---  307 (401)
T ss_dssp             CEEEECC---CCHHHHHHHHHHHHHT----TCCEEECTTCT--TCCCSSCGGGEEECSSCCHH---HHGGGSSEEEE---
T ss_pred             eEEEccCccccchHHHHHHHHHHHHc----CCeEEEeccCC--ccccccCCCCEEEEeccCHH---HHHhhcCEEEe---
Confidence            44445555432 33344455555444    22223333322  22223345899999999755   56788999994   


Q ss_pred             CCCCCChHHHHHHHcCCcEEecCCCC----CccceeeeCcceEEECC---CHHHHHHHHHHHHHc
Q 039338          391 RPQGLDLTLMEAMMSGKPVMASRFPS----IKGTIVVDDEFGFMFAP---NVESLHKTLEAAVSE  448 (493)
Q Consensus       391 ~~eg~~~~~~EAm~~G~PvI~s~~~~----~~~e~v~~~~~G~~~~~---d~~~l~~~i~~ll~~  448 (493)
                        .|..+++.||+++|+|+|+....+    .. +.+++.+.|..++.   ++++++++|.+++++
T Consensus       308 --hgG~~t~~Eal~~GvP~v~~P~~~DQ~~na-~~l~~~G~g~~l~~~~~~~~~l~~ai~~~l~~  369 (401)
T d1iira_         308 --HGGAGTTHVAARAGAPQILLPQMADQPYYA-GRVAELGVGVAHDGPIPTFDSLSAALATALTP  369 (401)
T ss_dssp             --CCCHHHHHHHHHHTCCEEECCCSTTHHHHH-HHHHHHTSEEECSSSSCCHHHHHHHHHHHTSH
T ss_pred             --cCCchHHHHHHHhCCCEEEccccccHHHHH-HHHHHCCCEEEcCcCCCCHHHHHHHHHHHhCH
Confidence              455779999999999999987544    12 34556678988875   799999999999954

>d1f6da_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDP-N-acetylglucosamine 2-epimerase
domain: UDP-N-acetylglucosamine 2-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.06  E-value=2.8e-09  Score=100.49  Aligned_cols=318  Identities=10%  Similarity=-0.005  Sum_probs=185.4

Q ss_pred             eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhC-CCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCCCc--
Q 039338           84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARR-GHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEADK--  160 (493)
Q Consensus        84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~-G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  160 (493)
                      |||++|+..      ..... .+..+.++|.+. ++++.++.+..+.  +...+....   .. ..+...+.....+.  
T Consensus         1 MKi~~v~Gt------R~e~~-kl~pli~~l~~~~~~~~~li~tG~H~--~~~~~~~~~---~~-~~~~~~~~~~~~~~~~   67 (376)
T d1f6da_           1 MKVLTVFGT------RPEAI-KMAPLVHALAKDPFFEAKVCVTAQHR--EMLDQVLKL---FS-IVPDYDLNIMQPGQGL   67 (376)
T ss_dssp             CEEEEEECS------HHHHH-HHHHHHHHHHHCTTCEEEEEECCTTG--GGGHHHHHH---TT-CCCSEECCCCSSSSCH
T ss_pred             CeEEEEEEh------hHhHH-HHHHHHHHHHhCCCCCEEEEEcCCCH--HHHHHHHHh---cC-CCCCcccccCCCCCCH
Confidence            899999962      22222 367789999876 6999999877653  211111000   00 01111111111111  


Q ss_pred             -cccccchHHHHHHhcCCCCcEEEeCcc---chhHH---hhhccCcEEEEeccchh-hhhhhhhhhhhhcCCCCccchHh
Q 039338          161 -WRYSKGWEQFDEENQREPFDVVHSESV---ALPHW---LARNVTNLAVSWHGIAL-ESLQSGIFQDLTRKPLEPMSLAF  232 (493)
Q Consensus       161 -~~~~~~~~~~~~~~~~~~~DiI~~~~~---~~~~~---~~~~~p~~v~~~h~~~~-~~~~~~~~~~~~~~~~~~~~~~~  232 (493)
                       .........+.+.+.+.+||+|++++-   .+++.   ...++|  ++++|+-.- .....                  
T Consensus        68 ~~~~~~~i~~~~~~~~~~kPD~v~v~GDr~e~la~a~aa~~~~ip--i~HiegG~~s~~~~~------------------  127 (376)
T d1f6da_          68 TEITCRILEGLKPILAEFKPDVVLVHGDTTTTLATSLAAFYQRIP--VGHVEAGLRTGDLYS------------------  127 (376)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHTTTCC--EEEESCCCCCSCTTS------------------
T ss_pred             HHHHHHHHHhhHHHHHhccCcceeeeccccchhhHHHHHHhhCce--EEEEecccccccccc------------------
Confidence             112233445566666789999999864   22222   234556  555665211 00000                  


Q ss_pred             HhHHHHHHHHHHHHHHhhccCCeEEEcChhHHHHHHHHhCCCCCcEEEecCCc-cCCC-----ccCC-cccchhhhhhhC
Q 039338          233 NKSLQGVMLKVLNEIRFFNKYAHHVAISDSCGEMLRDVYQIPSERVHVILNGI-NENE-----YGVD-LSLGQSFRSRIG  305 (493)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~d~ii~~S~~~~~~~~~~~~~~~~~v~vi~ngv-d~~~-----~~~~-~~~~~~~r~~~~  305 (493)
                       .......+.     ..-+-++..+|.++..++.+.+ .|.++.+++++.+.. |.-.     .... ........+...
T Consensus       128 -~~pde~~R~-----~iskls~~hf~~~~~~~~~L~~-~G~~~~~I~~vG~~~~D~l~~~~~~~~~~~~~~~~~~~~~~~  200 (376)
T d1f6da_         128 -PWPEEANRT-----LTGHLAMYHFSPTETSRQNLLR-ENVADSRIFITGNTVIDALLWVRDQVMSSDKLRSELAANYPF  200 (376)
T ss_dssp             -STTHHHHHH-----HHHHTCSEEEESSHHHHHHHHH-TTCCGGGEEECCCHHHHHHHHHHHHTTTCHHHHHHHHTTCTT
T ss_pred             -cCchhhhhh-----hhccceeEEEeccHHHHhHHHh-cCCCccccceecCchHHHHHHHHhhhhccchhhhhhhccccc
Confidence             001111111     1124578899999999999988 688889999998743 3100     0000 000111222233


Q ss_pred             CCCCCcEEEEEecccc-cccChHHHHHHHHHHHhhCCCeEEEEEeCCCcH--HHHhh---hcCcEEEecCCCHHHHHHHH
Q 039338          306 IPKNASLVLGVAGRLV-KDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWE--QRYKD---FGHQVLVMGSMSPAELRAFY  379 (493)
Q Consensus       306 i~~~~~~~i~~~Gr~~-~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~--~~~~~---l~~~V~~~g~~~~~~~~~~~  379 (493)
                      +..++++++++.=+.. ..+....++.++..+.+...++.+++.......  ....+   ..+++.+...+++.++..++
T Consensus       201 ~~~~~~~ilvt~H~~~~~~~~~~~i~~~l~~~~~~~~~~~ii~p~~~~~~~~~~~~~~~~~~~ni~~~~~l~~~~fl~ll  280 (376)
T d1f6da_         201 IDPDKKMILVTGHRRESFGRGFEEICHALADIATTHQDIQIVYPVHLNPNVREPVNRILGHVKNVILIDPQEYLPFVWLM  280 (376)
T ss_dssp             CCTTSEEEEECCCCBSSCCHHHHHHHHHHHHHHHHCTTEEEEEECCBCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHH
T ss_pred             cCCCCceEEEecccchhhhhhHHHHHHHHhhhhhhcceeEEecccccchhhhhhHhhhhcccccceeeccccHHHHHHHH
Confidence            4445556666655543 245567778888888777777777665432211  11212   23889999999999999999


Q ss_pred             HHcCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCccceeeeCcceEEECCCHHHHHHHHHHHHHc
Q 039338          380 NAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKGTIVVDDEFGFMFAPNVESLHKTLEAAVSE  448 (493)
Q Consensus       380 ~~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~e~v~~~~~G~~~~~d~~~l~~~i~~ll~~  448 (493)
                      +.|++++--|      |..+.||-.+|+|+|.-+.+.-..+.+.. ++-.+++.|.+++.+++.+++.+
T Consensus       281 ~~a~~vignS------ssgi~Ea~~lg~P~Inir~~ter~~~~~~-g~~i~v~~~~~~I~~ai~~~l~~  342 (376)
T d1f6da_         281 NHAWLILTDS------GGIQEEAPSLGKPVLVMRDTTERPEAVTA-GTVRLVGTDKQRIVEEVTRLLKD  342 (376)
T ss_dssp             HHCSEEEESS------SGGGGTGGGGTCCEEECSSCCSCHHHHHH-TSEEECCSSHHHHHHHHHHHHHC
T ss_pred             hhceEEEecC------cchHhhHHHhCCCEEEcCCCccCccceec-CeeEECCCCHHHHHHHHHHHHhC
Confidence            9999999544      34778999999999976443322244433 35566666999999999999987

>d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDPGT-like
domain: UDP glucose:flavonoid 3-o-glucosyltransferase
species: Grape (Vitis vinifera) [TaxId: 29760]

Probab=98.83  E-value=4.1e-08  Score=95.22  Aligned_cols=142  Identities=20%  Similarity=0.137  Sum_probs=88.7

Q ss_pred             CCCcEEEEEeccccccc--ChHHHHHHHHHHHhhCCCeEEEEEeCCCcH-----HHHhhhcCcEEEecCCCHHHHHHHHH
Q 039338          308 KNASLVLGVAGRLVKDK--GHPLLHEAFSKLMVKYPDVYLIVAGSGPWE-----QRYKDFGHQVLVMGSMSPAELRAFYN  380 (493)
Q Consensus       308 ~~~~~~i~~~Gr~~~~K--g~~~ll~a~~~l~~~~~~~~l~i~G~g~~~-----~~~~~l~~~V~~~g~~~~~~~~~~~~  380 (493)
                      ....++.+..|......  ....++++++.+     +.++++...+...     ........|+.+..++|+.++.. ..
T Consensus       263 ~~~~~v~~s~gs~~~~~~~~~~~~~~~~~~~-----~~~vl~~~~~~~~~~l~~~~~~~~~~nv~~~~~~pq~~lL~-hp  336 (450)
T d2c1xa1         263 KPTSVVYISFGTVTTPPPAEVVALSEALEAS-----RVPFIWSLRDKARVHLPEGFLEKTRGYGMVVPWAPQAEVLA-HE  336 (450)
T ss_dssp             CTTCEEEEECCSSCCCCHHHHHHHHHHHHHH-----TCCEEEECCGGGGGGSCTTHHHHHTTTEEEESCCCHHHHHT-ST
T ss_pred             CccceeeecccccccCCHHHHHHHHHHHHhc-----CCeEEEEECCCccccCChhhhhhccccccccccCChHhhhc-cC
Confidence            34446666777664321  133344444443     3345554332222     22334558999999998775432 36


Q ss_pred             HcCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCcc---ceeee-CcceEEECC---CHHHHHHHHHHHHHcCcHHH
Q 039338          381 AIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKG---TIVVD-DEFGFMFAP---NVESLHKTLEAAVSEGPMRL  453 (493)
Q Consensus       381 ~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~---e~v~~-~~~G~~~~~---d~~~l~~~i~~ll~~~~~~~  453 (493)
                      .++++|.   +  |-..++.||+.+|+|+|+....+-..   ..+++ .+.|..++.   +.+++.++|.++++| +. +
T Consensus       337 ~~~~fIt---H--GG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l~~~~~t~~~l~~ai~~vL~d-~~-y  409 (450)
T d2c1xa1         337 AVGAFVT---H--CGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIEGGVFTKSGLMSCFDQILSQ-EK-G  409 (450)
T ss_dssp             TEEEEEE---C--CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECGGGSCCHHHHHHHHHHHHHS-HH-H
T ss_pred             ceeEEEc---c--CCccHHHHHHHcCCCEEecccccchHHHHHHHHHHcCcEEEecCCCcCHHHHHHHHHHHhcC-cH-H
Confidence            7788884   2  33569999999999999998654211   13444 488998875   789999999999998 43 3


Q ss_pred             HHHHHHHHH
Q 039338          454 AQRGEACRQ  462 (493)
Q Consensus       454 ~~~~~~~~~  462 (493)
                      ++..+++.+
T Consensus       410 ~~~~~r~~~  418 (450)
T d2c1xa1         410 KKLRENLRA  418 (450)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            344444443

>d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDPGT-like
domain: Triterpene UDP-glucosyl transferase UGT71G1
species: Medicago truncatula [TaxId: 3880]

Probab=98.72  E-value=1.2e-05  Score=77.29  Aligned_cols=129  Identities=17%  Similarity=0.158  Sum_probs=79.6

Q ss_pred             EEEEEecccccccChHHHHHHHHHHHhhCCCeEEEEEeCCCc------HHHHhhhcCcEEEecCCCHHHHHHHHHHcCEE
Q 039338          312 LVLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPW------EQRYKDFGHQVLVMGSMSPAELRAFYNAIDIF  385 (493)
Q Consensus       312 ~~i~~~Gr~~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~------~~~~~~l~~~V~~~g~~~~~~~~~~~~~adv~  385 (493)
                      .++...|........+.+...+..+...  ..++++...+..      .........++.+..+.++.++. .+..+|++
T Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~v~~~~pq~~~l-~~p~~~~f  352 (461)
T d2acva1         276 VVFLCFGSMGVSFGPSQIREIALGLKHS--GVRFLWSNSAEKKVFPEGFLEWMELEGKGMICGWAPQVEVL-AHKAIGGF  352 (461)
T ss_dssp             EEEEECCSSCCCCCHHHHHHHHHHHHHH--TCEEEEECCCCGGGSCTTHHHHHHHHCSEEEESSCCHHHHH-HSTTEEEE
T ss_pred             eeeeeccccccCCCHHHHHHHHHHHHhc--CccEEEEeecccccCCccchhhhccCCCeEEEecCCHHHHH-hcccCCEE
Confidence            4444555544444444444444444333  334444322211      11222344889999998866554 57889999


Q ss_pred             EeCCCCCCCCChHHHHHHHcCCcEEecCCCCCcc---c-eeeeCcceEEECC---------CHHHHHHHHHHHHHc
Q 039338          386 VNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKG---T-IVVDDEFGFMFAP---------NVESLHKTLEAAVSE  448 (493)
Q Consensus       386 v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~---e-~v~~~~~G~~~~~---------d~~~l~~~i~~ll~~  448 (493)
                      |.   +  |-..++.||+.+|+|+|+....+=..   . +++..+.|+.++.         +++++.++|.+++++
T Consensus       353 It---H--GG~gs~~eAl~~GVP~l~~P~~~DQ~~nA~rlve~~G~G~~l~~~~~~~~~~~t~~~l~~a~~~vl~~  423 (461)
T d2acva1         353 VS---H--CGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDK  423 (461)
T ss_dssp             EE---C--CCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTSCCEEESCSSCCTTCCCCCHHHHHHHHHHHTCT
T ss_pred             Ee---c--CCccHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceEEeeccccccCCccCHHHHHHHHHHHhhC
Confidence            95   2  33469999999999999987544210   1 2345567887752         579999999999975

>d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDPGT-like
domain: (Iso)flavonoid glycosyltransferase
species: Medicago truncatula [TaxId: 3880]

Probab=98.58  E-value=1e-05  Score=78.05  Aligned_cols=118  Identities=10%  Similarity=0.106  Sum_probs=78.6

Q ss_pred             hhhcCcEEEecCCCHHHHHHHH--HHcCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCcc---cee-eeCcceEEE
Q 039338          358 KDFGHQVLVMGSMSPAELRAFY--NAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKG---TIV-VDDEFGFMF  431 (493)
Q Consensus       358 ~~l~~~V~~~g~~~~~~~~~~~--~~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~---e~v-~~~~~G~~~  431 (493)
                      .....||.+..++|+.++   +  .+++++|.   +  |-..++.||+.+|+|.|+....+=..   ..+ +..+.|..+
T Consensus       342 ~~~~~Nv~~~~~~Pq~~l---L~hp~~~~fIt---H--GG~~s~~Eal~~GVP~lv~P~~~DQ~~na~rv~~~~G~G~~l  413 (473)
T d2pq6a1         342 NEIADRGLIASWCPQDKV---LNHPSIGGFLT---H--CGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEI  413 (473)
T ss_dssp             HHHTTTEEEESCCCHHHH---HTSTTEEEEEE---C--CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEEC
T ss_pred             hhccCceEEeeeCCHHHH---hcCCcCcEEEe---c--CCccHHHHHHHcCCCEEeccchhhhHHHHHHHHHHcCeEEee
Confidence            345589999999987754   5  57788885   2  33569999999999999997644210   123 334788888


Q ss_pred             CC--CHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHhcCH-----HHHHHHHHHHHHHHhh
Q 039338          432 AP--NVESLHKTLEAAVSEGPMRLAQRGEACRQYAASMFTA-----NKMALAYERLFLCIKN  486 (493)
Q Consensus       432 ~~--d~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~fs~-----~~~~~~~~~~~~~i~~  486 (493)
                      +.  +.+++.++|.++++| +. .+++++++.+..+. +..     ..-...+++++++++.
T Consensus       414 ~~~~t~~~l~~ai~~vl~d-~~-~~~~r~~a~~l~~~-~~~a~~~gg~s~~~~~~~i~~~~~  472 (473)
T d2pq6a1         414 DTNVKREELAKLINEVIAG-DK-GKKMKQKAMELKKK-AEENTRPGGCSYMNLNKVIKDVLL  472 (473)
T ss_dssp             CSSCCHHHHHHHHHHHHTS-HH-HHHHHHHHHHHHHH-HHHHTSTTCHHHHHHHHHHHHTTC
T ss_pred             CCCcCHHHHHHHHHHHHcC-Ch-HHHHHHHHHHHHHH-HHHHHhCCCCHHHHHHHHHHHHhc
Confidence            86  899999999999998 53 23455555554332 110     0123346666776653

>d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDPGT-like
domain: Hydroquinone glucosyltransferase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.56  E-value=3.9e-05  Score=73.82  Aligned_cols=82  Identities=12%  Similarity=0.090  Sum_probs=58.8

Q ss_pred             cCcEEEecCCCHHHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcCCcEEecCCCCCcc---cee-eeCcceEEECC---
Q 039338          361 GHQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASRFPSIKG---TIV-VDDEFGFMFAP---  433 (493)
Q Consensus       361 ~~~V~~~g~~~~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~~~~~~~---e~v-~~~~~G~~~~~---  433 (493)
                      .+||.+.+++|+.++... .+++++|.   +  |-.+++.||+.+|+|+|+...-+-.-   ..+ +.-+.|+....   
T Consensus       333 ~~nv~~~~w~Pq~~lL~h-p~~~~fVt---H--GG~gS~~EAl~~GvP~v~~P~~~DQ~~nA~rv~e~lG~Gv~l~~~~~  406 (471)
T d2vcha1         333 KRGFVIPFWAPQAQVLAH-PSTGGFLT---H--CGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGDD  406 (471)
T ss_dssp             TTEEEEESCCCHHHHHHS-TTEEEEEE---C--CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEECCCCCTT
T ss_pred             CCCeeecccCCHHHHhcC-ccCCEEEe---c--CCccHHHHHHHcCCCEEEcccccccHHHHHHHHHHheeEEEEecCCC
Confidence            378999999998864331 56788884   3  33569999999999999987543110   123 33356776632   


Q ss_pred             ---CHHHHHHHHHHHHHc
Q 039338          434 ---NVESLHKTLEAAVSE  448 (493)
Q Consensus       434 ---d~~~l~~~i~~ll~~  448 (493)
                         +.+++.++|.++++|
T Consensus       407 ~~~t~~~l~~ai~~vl~~  424 (471)
T d2vcha1         407 GLVRREEVARVVKGLMEG  424 (471)
T ss_dssp             SCCCHHHHHHHHHHHHTS
T ss_pred             CcCCHHHHHHHHHHHhCC
Confidence               679999999999988

>d1pswa_ c.87.1.7 (A:) ADP-heptose LPS heptosyltransferase II {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: ADP-heptose LPS heptosyltransferase II
domain: ADP-heptose LPS heptosyltransferase II
species: Escherichia coli [TaxId: 562]

Probab=98.21  E-value=2.9e-05  Score=71.78  Aligned_cols=109  Identities=12%  Similarity=0.060  Sum_probs=76.9

Q ss_pred             chhhhhhhCCCCCCcEEEEEecc-cccccC--hHHHHHHHHHHHhhCCCeEEEEEeCCCcHHHHhhhc--------C-cE
Q 039338          297 GQSFRSRIGIPKNASLVLGVAGR-LVKDKG--HPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDFG--------H-QV  364 (493)
Q Consensus       297 ~~~~r~~~~i~~~~~~~i~~~Gr-~~~~Kg--~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~l~--------~-~V  364 (493)
                      .....+++++..+++.+++..|. ..+.|.  .+...+.+..+.++  +.+++++|.+.+.+..+++.        . -+
T Consensus       167 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~k~wp~~~~~~L~~~l~~~--~~~ivl~g~~~e~~~~~~~~~~~~~~~~~~~~  244 (348)
T d1pswa_         167 KSYTCNQFSLSSERPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDE--GYQVVLFGSAKDHEAGNEILAALNTEQQAWCR  244 (348)
T ss_dssp             HHHHHHHTTCCSSSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHT--TCEEEECCCGGGHHHHHHHHTTSCHHHHTTEE
T ss_pred             HHHHHHHhccccCCCeEEeccccchhhccccchHHHhhhHHHHhhc--CCccccccccchHHHHHHHHHhhhcccccccc
Confidence            34455667777777666666663 334454  45677888888775  56788888766655554431        3 34


Q ss_pred             EEecCCCHHHHHHHHHHcCEEEeCCCCCCCCChHHHHHHHcCCcEEecC
Q 039338          365 LVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMASR  413 (493)
Q Consensus       365 ~~~g~~~~~~~~~~~~~adv~v~ps~~~eg~~~~~~EAm~~G~PvI~s~  413 (493)
                      .+.|..+-.|+..+++.||++|.+.    +  ..+--|.++|+|+|+-=
T Consensus       245 ~l~g~~sl~el~~li~~a~l~I~~D----t--g~~HlAaa~g~p~i~lf  287 (348)
T d1pswa_         245 NLAGETQLDQAVILIAACKAIVTND----S--GLMHVAAALNRPLVALY  287 (348)
T ss_dssp             ECTTTSCHHHHHHHHHTSSEEEEES----S--HHHHHHHHTTCCEEEEE
T ss_pred             cccCCccHHHHHHHHhcceeEeecC----c--cHHHHHHHcCCCEEEEE
Confidence            5678888899999999999999643    2  26677999999999863

>d2gj4a1 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Oligosaccharide phosphorylase
domain: Glycogen phosphorylase
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=97.77  E-value=0.00092  Score=66.86  Aligned_cols=183  Identities=14%  Similarity=0.148  Sum_probs=126.4

Q ss_pred             hccCCeEEEcChhHHHHHHHH-----hCCCCCcEEEecCCccCCCccCCcc-----------------------------
Q 039338          250 FNKYAHHVAISDSCGEMLRDV-----YQIPSERVHVILNGINENEYGVDLS-----------------------------  295 (493)
Q Consensus       250 ~~~~d~ii~~S~~~~~~~~~~-----~~~~~~~v~vi~ngvd~~~~~~~~~-----------------------------  295 (493)
                      +..+..+-.+|.--.+.+++.     +.+.+.++.-+-|||....|-....                             
T Consensus       435 l~~S~~vNGVSklH~ev~~~~~~~~~~~~~p~ki~~iTNGV~~rrWl~~~np~L~~l~~~~ig~~w~~d~~~l~~l~~~~  514 (824)
T d2gj4a1         435 IAGSHAVNGVARIHSEILKKTIFKDFYELEPHKFQNKTNGITPRRWLVLCNPGLAEIIAERIGEEYISDLDQLRKLLSYV  514 (824)
T ss_dssp             HHTCSCEEESSHHHHHHHHHTTTHHHHHHCGGGEEECCCCBCTCCCCCCTCHHHHHHHHHHHCSGGGGCGGGGGGGGGGT
T ss_pred             HHhchhHHHHHHHHHHHHHHhhccccccCCCcceecccCcccCccchhccCHHHHHHHHhhhccccccCHHHHHHHHHhC
Confidence            445667788888777766653     2334568999999999887732100                             


Q ss_pred             -c------------------chhhhhhhC--CCCCCcEEEEEecccccccChHH----HHHHHHHHHhh----CCCeEEE
Q 039338          296 -L------------------GQSFRSRIG--IPKNASLVLGVAGRLVKDKGHPL----LHEAFSKLMVK----YPDVYLI  346 (493)
Q Consensus       296 -~------------------~~~~r~~~~--i~~~~~~~i~~~Gr~~~~Kg~~~----ll~a~~~l~~~----~~~~~l~  346 (493)
                       +                  .+.++++.|  ++++. +.++++-|+..+|...+    ++..+.++++.    ..+++++
T Consensus       515 ~d~~~~~~~~~~k~~~K~~L~~~i~~~~g~~ldp~~-lfd~~arRfheYKRq~Ln~~~i~~ly~rlk~~~~~~~~P~q~I  593 (824)
T d2gj4a1         515 DDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNS-LFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVM  593 (824)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTS-EEEEEESCCCGGGTHHHHHHHHHHHHHHHHHCTTSCCCCEEEE
T ss_pred             CCHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCCcch-hhhhheeechhhhhhhhhHhhHHHHHHHhhhcccCCCCCeEEE
Confidence             0                  011122233  45555 88999999999999887    33334555542    1368899


Q ss_pred             EEeCCC-c----HHHHh---hh----------c--CcEEEecCCCHHHHHHHHHHcCEEEeCCC-CCCCCChHHHHHHHc
Q 039338          347 VAGSGP-W----EQRYK---DF----------G--HQVLVMGSMSPAELRAFYNAIDIFVNPTL-RPQGLDLTLMEAMMS  405 (493)
Q Consensus       347 i~G~g~-~----~~~~~---~l----------~--~~V~~~g~~~~~~~~~~~~~adv~v~ps~-~~eg~~~~~~EAm~~  405 (493)
                      +.|... .    ++.++   ++          +  -+|.|+...+-+-...++.++||-++.+. --|..|+.-+-+|.-
T Consensus       594 FaGKAhP~d~~gK~iIk~I~~va~~in~dp~~~~~lkVvFlenY~v~lA~~li~g~Dvwln~p~~~~EASGTSgMK~alN  673 (824)
T d2gj4a1         594 IGGKAAPGYHMAKMIIKLITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLN  673 (824)
T ss_dssp             EECCCCTTCHHHHHHHHHHHHHHHHHTTCTTTGGGEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHT
T ss_pred             EeCCCCCccHHHHHHHHHHHHHHHHHhcChhhccceeEEEcCCCchHHHHHhhhhhhhhhcCCCCCcccCCcchhHHHHc
Confidence            999631 1    22222   11          1  26899999987778889999999999665 348899999999999


Q ss_pred             CCcEEecCCCCCccceeee--CcceEEECCC
Q 039338          406 GKPVMASRFPSIKGTIVVD--DEFGFMFAPN  434 (493)
Q Consensus       406 G~PvI~s~~~~~~~e~v~~--~~~G~~~~~d  434 (493)
                      |.+.+++--|... |+..+  ++||+.|..+
T Consensus       674 Gal~lstlDGwnv-Ei~~~vg~~N~~~fG~~  703 (824)
T d2gj4a1         674 GALTIGTMDGANV-EMAEEAGEENFFIFGMR  703 (824)
T ss_dssp             TCEEEECSCTTHH-HHHHHHCGGGSEECSCC
T ss_pred             CCeeeccccchHH-HHHHhcCcccEEEeCCC
Confidence            9999999888877 66553  7789998653

>d1l5wa_ c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Oligosaccharide phosphorylase
domain: Maltodextrin phosphorylase (MALP)
species: Escherichia coli [TaxId: 562]

Probab=97.55  E-value=0.00076  Score=67.40  Aligned_cols=183  Identities=13%  Similarity=0.087  Sum_probs=124.9

Q ss_pred             hccCCeEEEcChhHHHHHHHHh-----CCCCCcEEEecCCccCCCccCCc--------------------cc--------
Q 039338          250 FNKYAHHVAISDSCGEMLRDVY-----QIPSERVHVILNGINENEYGVDL--------------------SL--------  296 (493)
Q Consensus       250 ~~~~d~ii~~S~~~~~~~~~~~-----~~~~~~v~vi~ngvd~~~~~~~~--------------------~~--------  296 (493)
                      +..+..+-.+|.--.+.+++.+     .+-+.++.-|-|||....|-...                    +.        
T Consensus       411 l~~S~~vNGVSklH~ev~~~~~~~~~~~~~p~~i~~ITNGVh~~~Wl~~~n~~L~~l~~~~ig~~w~~~~~~l~~~~~~~  490 (796)
T d1l5wa_         411 VVGGFAVNGVAALHSDLVVKDLFPEYHQLWPNKFHNVTNGITPRRWIKQCNPALAALLDKSLQKEWANDLDQLINLEKFA  490 (796)
T ss_dssp             HHHSSEEEESSHHHHHHHHHTTSHHHHHHCGGGEEECCCCBCHHHHTTTTCHHHHHHHHHHCSSCCTTCGGGGGGGGGGG
T ss_pred             HHhhhhhHHHHHHHHHHHHHHhhhhccccCCcccccccccccHHHHHhhhCHHHHHHHHhhcccccccCHHHHHHHHhcc
Confidence            3456778899988877665522     23356899999999876663210                    00        


Q ss_pred             --------------------chhhhhhhC--CCCCCcEEEEEecccccccChHHHHHHH----HHHHhh----CCCeEEE
Q 039338          297 --------------------GQSFRSRIG--IPKNASLVLGVAGRLVKDKGHPLLHEAF----SKLMVK----YPDVYLI  346 (493)
Q Consensus       297 --------------------~~~~r~~~~--i~~~~~~~i~~~Gr~~~~Kg~~~ll~a~----~~l~~~----~~~~~l~  346 (493)
                                          .+.++...|  ++++. ++++++-|+..+|...+++.-+    ..++..    ..+++++
T Consensus       491 ~d~~~~~~l~~~k~~~K~~L~~~i~~~~g~~ldp~~-LtigfaRRfa~YKR~~L~~~~i~~l~~~l~~~~~~~~~Pvq~I  569 (796)
T d1l5wa_         491 DDAKFRQQYREIKQANKVRLAEFVKVRTGIEINPQA-IFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFL  569 (796)
T ss_dssp             GCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTS-EEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccChhh-ccchhhhhhhhhhcccchhhhHHHHHHHHhcCcccCCCceEEE
Confidence                                001112233  44555 8999999999999988844332    233322    1258999


Q ss_pred             EEeCC-Cc----HHHHhh---hc------------CcEEEecCCCHHHHHHHHHHcCEEEeCCC-CCCCCChHHHHHHHc
Q 039338          347 VAGSG-PW----EQRYKD---FG------------HQVLVMGSMSPAELRAFYNAIDIFVNPTL-RPQGLDLTLMEAMMS  405 (493)
Q Consensus       347 i~G~g-~~----~~~~~~---l~------------~~V~~~g~~~~~~~~~~~~~adv~v~ps~-~~eg~~~~~~EAm~~  405 (493)
                      +.|.. |.    ++.++.   ++            -+|.|+...+-+-...++.++||-++.+. --|..|++-+-|+.-
T Consensus       570 faGKAhP~d~~gK~iIk~I~~va~~in~dp~~~~~~kVVFlenYdv~lA~~lv~g~DVwln~p~~p~EASGTSgMKaalN  649 (796)
T d1l5wa_         570 FGAKAAPGYYLAKNIIFAINKVADVINNDPLVGDKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALN  649 (796)
T ss_dssp             EECCCCTTCHHHHHHHHHHHHHHHHHHTCTTTGGGEEEEECSSCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHT
T ss_pred             EcCCCCCchHHHHHHHHHHHHHHHHhcCChhhccceeEEEeCCCchHHHHHHhcccchhhhCCCCCcccCCchHHHHHHc
Confidence            99963 21    222221   11            27999999987777788999999999654 348999999999999


Q ss_pred             CCcEEecCCCCCccceeee--CcceEEECCC
Q 039338          406 GKPVMASRFPSIKGTIVVD--DEFGFMFAPN  434 (493)
Q Consensus       406 G~PvI~s~~~~~~~e~v~~--~~~G~~~~~d  434 (493)
                      |.+.+++--|... |+..+  ++|||.|..+
T Consensus       650 G~lnlstlDGw~v-E~~~~vg~eN~f~fG~~  679 (796)
T d1l5wa_         650 GALTVGTLDGANV-EIAEKVGEENIFIFGHT  679 (796)
T ss_dssp             TCEEEECSCTTHH-HHHHHHCGGGSEECSCC
T ss_pred             CCeeeecccchHH-HHHHhcCccceEEecCc
Confidence            9999999888877 66543  7899999643

>d1uana_ c.134.1.1 (A:) Hypothetical protein TT1542 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: LmbE-like
superfamily: LmbE-like
family: LmbE-like
domain: Hypothetical protein TT1542
species: Thermus thermophilus [TaxId: 274]

Probab=90.13  E-value=0.11  Score=43.43  Aligned_cols=40  Identities=15%  Similarity=0.081  Sum_probs=26.6

Q ss_pred             eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCC
Q 039338           84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDN  129 (493)
Q Consensus        84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~  129 (493)
                      ||||+|+++ |-     -.+..+-.....++++|++|++++.....
T Consensus         2 ~~VLvi~aH-PD-----De~lg~GGtiak~~~~G~~V~vv~~T~G~   41 (227)
T d1uana_           2 LDLLVVAPH-PD-----DGELGCGGTLARAKAEGLSTGILDLTRGE   41 (227)
T ss_dssp             EEEEEEESS-TT-----HHHHHHHHHHHHHHHTTCCEEEEEEECCT
T ss_pred             ceEEEEEeC-CC-----hHHHHHHHHHHHHHHcCCeEEEEEEeCCC
Confidence            789999874 32     22333444455567889999998876544

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=87.73  E-value=0.27  Score=39.67  Aligned_cols=33  Identities=21%  Similarity=0.440  Sum_probs=25.8

Q ss_pred             eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecC
Q 039338           84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSP  126 (493)
Q Consensus        84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~  126 (493)
                      |||+++.       ..|+.+   ..|++.|++.||+|.+....
T Consensus         1 Mki~vig-------GaG~iG---~alA~~la~~G~~V~l~~R~   33 (212)
T d1jaya_           1 MRVALLG-------GTGNLG---KGLALRLATLGHEIVVGSRR   33 (212)
T ss_dssp             CEEEEET-------TTSHHH---HHHHHHHHTTTCEEEEEESS
T ss_pred             CEEEEEe-------CCcHHH---HHHHHHHHHCCCEEEEEECC
Confidence            8999884       225544   56999999999999999754

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=87.53  E-value=2  Score=31.03  Aligned_cols=81  Identities=19%  Similarity=0.135  Sum_probs=51.4

Q ss_pred             CceEEEEEeccCCCCCCCC-c--hHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCC
Q 039338           82 FTLKIAVFSRKWPISTTPG-G--MERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEA  158 (493)
Q Consensus        82 ~~mkIl~v~~~~p~~~~~g-G--~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (493)
                      .+-||+++... |.  ..| |  ......+.+++|++.|+++.++.+.+.....   +        ......+++-+.  
T Consensus         3 ~~kkvlViGsG-p~--rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVst---d--------~d~aD~lYfepl--   66 (121)
T d1a9xa4           3 DREKIMVLGGG-PN--RIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVST---D--------YDTSDRLYFEPV--   66 (121)
T ss_dssp             SSCEEEEECCC-SC--BTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTT---S--------TTSSSEEECCCC--
T ss_pred             CCCEEEEECCC-cC--cccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhc---C--------hhhcCceEEccC--
Confidence            34579999873 22  222 2  2344668899999999999999887765111   1        112233344322  


Q ss_pred             CccccccchHHHHHHhcCCCCcEEEeC
Q 039338          159 DKWRYSKGWEQFDEENQREPFDVVHSE  185 (493)
Q Consensus       159 ~~~~~~~~~~~~~~~~~~~~~DiI~~~  185 (493)
                             .+..+.+++++++||-|+..
T Consensus        67 -------t~e~v~~Ii~~E~p~~ii~~   86 (121)
T d1a9xa4          67 -------TLEDVLEIVRIEKPKGVIVQ   86 (121)
T ss_dssp             -------SHHHHHHHHHHHCCSEEECS
T ss_pred             -------CHHHHHHHHHHhCCCEEEee
Confidence                   34677788888899998876

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=87.10  E-value=0.37  Score=37.64  Aligned_cols=35  Identities=26%  Similarity=0.411  Sum_probs=27.6

Q ss_pred             eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCC
Q 039338           84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDN  129 (493)
Q Consensus        84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~  129 (493)
                      |||+++..        |.++..   ++..|++.||+|+++......
T Consensus         1 MkI~IiGa--------G~iG~~---~a~~L~~~G~~V~~~~r~~~~   35 (167)
T d1ks9a2           1 MKITVLGC--------GALGQL---WLTALCKQGHEVQGWLRVPQP   35 (167)
T ss_dssp             CEEEEECC--------SHHHHH---HHHHHHHTTCEEEEECSSCCS
T ss_pred             CEEEEECc--------CHHHHH---HHHHHHHCCCceEEEEcCHHH
Confidence            89999953        666654   888999999999999865543

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=86.84  E-value=0.35  Score=41.39  Aligned_cols=33  Identities=15%  Similarity=0.161  Sum_probs=23.8

Q ss_pred             ceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEec
Q 039338           83 TLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTS  125 (493)
Q Consensus        83 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~  125 (493)
                      .|||++.          ||.+..-..|++.|.++||+|+.+..
T Consensus         1 ~MKIlIt----------GasGfiG~~l~~~L~~~g~~Vi~~~r   33 (281)
T d1vl0a_           1 HMKILIT----------GANGQLGREIQKQLKGKNVEVIPTDV   33 (281)
T ss_dssp             CEEEEEE----------STTSHHHHHHHHHHTTSSEEEEEECT
T ss_pred             CCEEEEE----------CCCCHHHHHHHHHHHhCCCEEEEeec
Confidence            3998766          33344455689999999999987653

>d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Polymyxin resistance protein ArnA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=86.72  E-value=0.69  Score=37.58  Aligned_cols=32  Identities=19%  Similarity=0.145  Sum_probs=23.1

Q ss_pred             eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecC
Q 039338           84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSP  126 (493)
Q Consensus        84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~  126 (493)
                      |||++++..           .....+.++|.+.||+|..+.+.
T Consensus         1 Mkiv~~~~~-----------~~g~~~l~~L~~~g~~I~~Vvt~   32 (203)
T d2blna2           1 MKTVVFAYH-----------DMGCLGIEALLAAGYEISAIFTH   32 (203)
T ss_dssp             CEEEEEECH-----------HHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CeEEEEecC-----------HHHHHHHHHHHHCCCCEEEEEcC
Confidence            899999752           13455678888899999766543

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=86.51  E-value=0.26  Score=43.86  Aligned_cols=32  Identities=28%  Similarity=0.430  Sum_probs=25.4

Q ss_pred             eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEec
Q 039338           84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTS  125 (493)
Q Consensus        84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~  125 (493)
                      ||||+.          ||.+..-..|++.|.++||+|+++..
T Consensus         1 MKiLIt----------G~tGfIG~~l~~~L~~~g~~V~~~d~   32 (338)
T d1udca_           1 MRVLVT----------GGSGYIGSHTCVQLLQNGHDVIILDN   32 (338)
T ss_dssp             CEEEEE----------TTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CEEEEE----------CCCCHHHHHHHHHHHHCcCEEEEEEC
Confidence            897776          45555667799999999999999853

>d1fmta2 c.65.1.1 (A:1-206) Methionyl-tRNAfmet formyltransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Methionyl-tRNAfmet formyltransferase
species: Escherichia coli [TaxId: 562]

Probab=86.11  E-value=0.69  Score=37.67  Aligned_cols=36  Identities=22%  Similarity=0.108  Sum_probs=25.6

Q ss_pred             CCceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCC
Q 039338           81 KFTLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPV  127 (493)
Q Consensus        81 ~~~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~  127 (493)
                      +.+|||+++..           ........+.|.+.||+|..+.+..
T Consensus         1 ~~~mKI~f~G~-----------~~~~~~~L~~L~~~~~~i~~Vit~~   36 (206)
T d1fmta2           1 SESLRIIFAGT-----------PDFAARHLDALLSSGHNVVGVFTQP   36 (206)
T ss_dssp             CCCCEEEEEEC-----------SHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred             CCCcEEEEECC-----------CHHHHHHHHHHHhCCCCEEEEEeCC
Confidence            35899999964           1245567788888999987666543

>d1ydga_ c.23.5.8 (A:) Trp repressor binding protein WrbA {Deinococcus radiodurans [TaxId: 1299]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Flavoproteins
family: WrbA-like
domain: Trp repressor binding protein WrbA
species: Deinococcus radiodurans [TaxId: 1299]

Probab=85.83  E-value=0.63  Score=37.74  Aligned_cols=42  Identities=17%  Similarity=0.120  Sum_probs=33.5

Q ss_pred             ceEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCC
Q 039338           83 TLKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDN  129 (493)
Q Consensus        83 ~mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~  129 (493)
                      +|||++|..+     ..|-....+..+++.+.+.|+||.++......
T Consensus         2 ~mkilivy~S-----~~GnT~~la~~ia~g~~~~G~ev~~~~~~~~~   43 (201)
T d1ydga_           2 PVKLAIVFYS-----STGTGYAMAQEAAEAGRAAGAEVRLLKVRETA   43 (201)
T ss_dssp             CCEEEEEECC-----SSSHHHHHHHHHHHHHHHTTCEEEEEECCCCS
T ss_pred             CcEEEEEEeC-----CCcHHHHHHHHHHHHHHhcCCEEEEEEccccC
Confidence            7999999753     55666777788899999999999999776533

>d1vkza2 c.30.1.1 (A:4-93) Glycinamide ribonucleotide synthetase (GAR-syn), N-domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide synthetase (GAR-syn), N-domain
species: Thermotoga maritima [TaxId: 2336]

Probab=85.01  E-value=1.3  Score=30.33  Aligned_cols=30  Identities=27%  Similarity=0.651  Sum_probs=23.2

Q ss_pred             eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEe
Q 039338           84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFT  124 (493)
Q Consensus        84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~  124 (493)
                      ||||+|..        ||-|.   .++..|.+..++++++.
T Consensus         1 MkVLviGs--------GgREH---Aia~~l~~s~~~v~~~p   30 (90)
T d1vkza2           1 VRVHILGS--------GGREH---AIGWAFAKQGYEVHFYP   30 (90)
T ss_dssp             CEEEEEEC--------SHHHH---HHHHHHHHTTCEEEEEE
T ss_pred             CEEEEECC--------CHHHH---HHHHHHhcCCCeEEEec
Confidence            89999964        66554   56888888899988764

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=84.84  E-value=2.2  Score=31.23  Aligned_cols=83  Identities=18%  Similarity=0.117  Sum_probs=52.1

Q ss_pred             CceEEEEEeccCCCC-CCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCCCc
Q 039338           82 FTLKIAVFSRKWPIS-TTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEADK  160 (493)
Q Consensus        82 ~~mkIl~v~~~~p~~-~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (493)
                      ..-||+++... |.. ...+-......+.+++|++.|+++.++.+.+... .  .+.        .....+++-+.    
T Consensus         6 ~~kkvlilGsG-p~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TV-s--td~--------d~aD~lYfePl----   69 (127)
T d1a9xa3           6 DIKSILILGAG-PIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATI-M--TDP--------EMADATYIEPI----   69 (127)
T ss_dssp             SCCEEEEECCC-SCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCG-G--GCG--------GGSSEEECSCC----
T ss_pred             CCCEEEEECCC-cCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhh-h--cCh--------hhcceeeeecC----
Confidence            45679999873 221 1222344557788999999999999998776551 1  000        11223333222    


Q ss_pred             cccccchHHHHHHhcCCCCcEEEeC
Q 039338          161 WRYSKGWEQFDEENQREPFDVVHSE  185 (493)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~DiI~~~  185 (493)
                           .+..+.+++++++||.|+..
T Consensus        70 -----t~e~v~~Ii~~E~pd~il~~   89 (127)
T d1a9xa3          70 -----HWEVVRKIIEKERPDAVLPT   89 (127)
T ss_dssp             -----CHHHHHHHHHHHCCSEEECS
T ss_pred             -----CHHHHHHHHHHhCcCCeEEE
Confidence                 35778888888899998765

>d2d1pa1 c.114.1.1 (A:1-128) tRNA 2-thiouridine synthesizing protein D, TusD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: DsrEFH-like
superfamily: DsrEFH-like
family: DsrEF-like
domain: tRNA 2-thiouridine synthesizing protein D, TusD
species: Escherichia coli [TaxId: 562]

Probab=84.82  E-value=0.86  Score=33.81  Aligned_cols=42  Identities=17%  Similarity=0.182  Sum_probs=30.8

Q ss_pred             eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEE-EEecCCC
Q 039338           84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVH-IFTSPVD  128 (493)
Q Consensus        84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~-v~~~~~~  128 (493)
                      ||++++...=|   ..+........+++++.++||+|. ||...+.
T Consensus         1 Mk~~i~v~~~P---~~~~~a~~A~~fA~aal~~Gh~V~~vF~~~dG   43 (128)
T d2d1pa1           1 MRFAIVVTGPA---YGTQQASSAFQFAQALIADGHELSSVFFYREG   43 (128)
T ss_dssp             CEEEEEECSCS---SSSSHHHHHHHHHHHHHHTTCEEEEEEECGGG
T ss_pred             CEEEEEEecCC---CCcHHHHHHHHHHHHHHhCCCceeEEEEechH
Confidence            88888877522   334556678899999999999994 7765443

>d2hy5a1 c.114.1.1 (A:1-130) Sulfurtransferase DsrE {Chromatium vinosum [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: DsrEFH-like
superfamily: DsrEFH-like
family: DsrEF-like
domain: Sulfurtransferase DsrE
species: Chromatium vinosum [TaxId: 1049]

Probab=84.32  E-value=0.94  Score=33.67  Aligned_cols=41  Identities=20%  Similarity=0.229  Sum_probs=30.9

Q ss_pred             eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEE-EEEecCC
Q 039338           84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRV-HIFTSPV  127 (493)
Q Consensus        84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V-~v~~~~~  127 (493)
                      ||++++...=|   ..+-..+....+++++.++||+| .||....
T Consensus         1 Mk~~i~v~~~P---~~~~~a~~al~fA~aal~~gh~V~~vFf~~d   42 (130)
T d2hy5a1           1 MKFALQINEGP---YQHQASDSAYQFAKAALEKGHEIFRVFFYHD   42 (130)
T ss_dssp             CEEEEEECSCT---TTSTHHHHHHHHHHHHHHTTCEEEEEEECGG
T ss_pred             CEEEEEEcCCC---CCcHHHHHHHHHHHHHHHCCCeEEEEEEecc
Confidence            89888887532   33455667899999999999999 4776544

>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Molybdopterin-guanine dinucleotide biosynthesis protein MobB
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=84.15  E-value=2  Score=33.13  Aligned_cols=41  Identities=15%  Similarity=0.099  Sum_probs=32.8

Q ss_pred             eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCC
Q 039338           84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDN  129 (493)
Q Consensus        84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~  129 (493)
                      |||.-|+..     ...|=.+.+..|++.|.++|+.|.++-.....
T Consensus         1 Mkii~I~G~-----~gSGKTTli~~l~~~L~~~g~~v~vik~d~~~   41 (165)
T d1xjca_           1 MNVWQVVGY-----KHSGKTTLMEKWVAAAVREGWRVGTVKHHGHG   41 (165)
T ss_dssp             CCEEEEECC-----TTSSHHHHHHHHHHHHHHTTCCEEEEECCC--
T ss_pred             CcEEEEEeC-----CCCCHHHHHHHHHHHHHhCCCeEEEEEeccCc
Confidence            888877762     66788889999999999999999999755443

>d1j9ja_ c.106.1.1 (A:) SurE homolog TM1662 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: SurE-like
superfamily: SurE-like
family: SurE-like
domain: SurE homolog TM1662
species: Thermotoga maritima [TaxId: 2336]

Probab=84.00  E-value=2.5  Score=35.20  Aligned_cols=38  Identities=16%  Similarity=0.210  Sum_probs=27.8

Q ss_pred             eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCC
Q 039338           84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDN  129 (493)
Q Consensus        84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~  129 (493)
                      ||||+....     ...  .--+..|+++|++ +|+|+|+.+..+.
T Consensus         1 M~ILltNDD-----Gi~--s~gl~~L~~~l~~-~~~V~vvAP~~~~   38 (247)
T d1j9ja_           1 MRILVTNDD-----GIQ--SKGIIVLAELLSE-EHEVFVVAPDKER   38 (247)
T ss_dssp             CEEEEECSS-----CTT--CHHHHHHHHHHTT-TSEEEEEEESSCC
T ss_pred             CeEEEEcCC-----CCC--ChHHHHHHHHHhc-CCeEEEEecCCCC
Confidence            899998874     222  2236778888854 8999999997765

>d2bw0a2 c.65.1.1 (A:1-203) 10-formyltetrahydrofolate dehydrogenase domain 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: 10-formyltetrahydrofolate dehydrogenase domain 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.94  E-value=2.6  Score=33.92  Aligned_cols=106  Identities=12%  Similarity=0.127  Sum_probs=51.9

Q ss_pred             eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCCCCCCCCCccccCCCCCCCCCCceEeecCCCCcccc
Q 039338           84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVDNINSPSISHQENDDGSNNKYPLLHFHEGEADKWRY  163 (493)
Q Consensus        84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  163 (493)
                      |||+++..           ..+.....+.|.+.||+|..+.+.++.  ........... ...+.+.....    .....
T Consensus         1 MkI~~~G~-----------~~~~~~~l~~L~~~~~~i~~V~t~p~~--~~~~~~v~~~a-~~~~ipv~~~~----~~~~~   62 (203)
T d2bw0a2           1 MKIAVIGQ-----------SLFGQEVYCHLRKEGHEVVGVFTVPDK--DGKADPLGLEA-EKDGVPVFKYS----RWRAK   62 (203)
T ss_dssp             CEEEEECC-----------HHHHHHHHHHHHHTTCEEEEEEECCCC--SSCCCHHHHHH-HHHTCCEEECS----CCEET
T ss_pred             CEEEEEcC-----------CHHHHHHHHHHHHCCCcEEEEEcCCCc--CcCCChhhhhH-HhcCCcccccc----ccccc
Confidence            89999954           235667888888999999866544332  11000000000 00011111110    00111


Q ss_pred             ccchHHHHHHhcCCCCcEEEeCccc--hhHHhhhccCcEEEEeccc
Q 039338          164 SKGWEQFDEENQREPFDVVHSESVA--LPHWLARNVTNLAVSWHGI  207 (493)
Q Consensus       164 ~~~~~~~~~~~~~~~~DiI~~~~~~--~~~~~~~~~p~~v~~~h~~  207 (493)
                      ......+.+.+++.+||++++.++.  ++..+....+.-++.+|.-
T Consensus        63 ~~~~~~~~~~l~~~~~Dliv~~~~~~ii~~~~l~~~~~g~iN~H~s  108 (203)
T d2bw0a2          63 GQALPDVVAKYQALGAELNVLPFCSQFIPMEIISAPRHGSIIYHPS  108 (203)
T ss_dssp             TEECHHHHHHHHTTCCSEEEESSCSSCCCHHHHTCSTTCEEEEESS
T ss_pred             ccccHHHHHHHHHhCCCceEEeecchhhhhhhhhhhhhHhhhhhhc
Confidence            1122345556668899999987653  2323322222236778853

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=83.36  E-value=1.2  Score=39.71  Aligned_cols=32  Identities=13%  Similarity=0.175  Sum_probs=23.2

Q ss_pred             eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEec
Q 039338           84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTS  125 (493)
Q Consensus        84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~  125 (493)
                      ||||+.          ||.+..-..|++.|.+.||+|++...
T Consensus         1 MkILIt----------G~tGfIGs~l~~~L~~~g~~vv~~~d   32 (361)
T d1kewa_           1 MKILIT----------GGAGFIGSAVVRHIIKNTQDTVVNID   32 (361)
T ss_dssp             CEEEEE----------STTSHHHHHHHHHHHHHCSCEEEEEE
T ss_pred             CEEEEE----------CCCcHHHHHHHHHHHHCCCCEEEEEe
Confidence            898665          44455556799999999999766543

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=81.78  E-value=1.1  Score=39.87  Aligned_cols=33  Identities=24%  Similarity=0.302  Sum_probs=25.2

Q ss_pred             EEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecC
Q 039338           85 KIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSP  126 (493)
Q Consensus        85 kIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~  126 (493)
                      ||++||         ||.+..-..|++.|.++||+|+++...
T Consensus         2 K~vLIT---------GatGfiGs~lv~~Ll~~g~~V~~~~r~   34 (357)
T d1db3a_           2 KVALIT---------GVTGQDGSYLAEFLLEKGYEVHGIKRR   34 (357)
T ss_dssp             CEEEEE---------TTTSHHHHHHHHHHHHTTCEEEEECC-
T ss_pred             CEEEEe---------CCCcHHHHHHHHHHHHCcCEEEEEECC
Confidence            678887         455555667999999999999988654

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=81.71  E-value=0.97  Score=30.99  Aligned_cols=32  Identities=19%  Similarity=0.183  Sum_probs=25.7

Q ss_pred             eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEec
Q 039338           84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTS  125 (493)
Q Consensus        84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~  125 (493)
                      |||-|+        ..||.+  +..||+.|.++|++|.-.-.
T Consensus         2 ~~ihfi--------GIgG~G--Ms~LA~~L~~~G~~VsGSD~   33 (89)
T d1j6ua1           2 MKIHFV--------GIGGIG--MSAVALHEFSNGNDVYGSNI   33 (89)
T ss_dssp             CEEEEE--------TTTSHH--HHHHHHHHHHTTCEEEEECS
T ss_pred             cEEEEE--------eECHHH--HHHHHHHHHhCCCeEEEEeC
Confidence            788777        458877  66689999999999987643

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=80.07  E-value=1  Score=33.53  Aligned_cols=34  Identities=24%  Similarity=0.334  Sum_probs=26.7

Q ss_pred             eEEEEEeccCCCCCCCCchHHHHHHHHHHHHhCCCEEEEEecCCC
Q 039338           84 LKIAVFSRKWPISTTPGGMERHAHTLHVALARRGHRVHIFTSPVD  128 (493)
Q Consensus        84 mkIl~v~~~~p~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~  128 (493)
                      |||+++..           ++.-..+++.|.+.||+|.++-....
T Consensus         1 M~IvI~G~-----------G~~G~~la~~L~~~g~~v~vid~d~~   34 (132)
T d1lssa_           1 MYIIIAGI-----------GRVGYTLAKSLSEKGHDIVLIDIDKD   34 (132)
T ss_dssp             CEEEEECC-----------SHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred             CEEEEECC-----------CHHHHHHHHHHHHCCCCcceecCChh
Confidence            88888842           44567799999999999999976543