Citrus Sinensis ID: 039373

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300
Protein Sequence
MGLAHKESTFSDEDGFEDEDVSELNEEVSESESDSEGEEDVKLAEPSKQAVYNRDGLEEKLQDISWLENAGWIHKLTIDIDQEQEVDVNDDLKREASFYTQALEGTRQAFEKLQSMGLPFLRPADYYAEMVKSDAHMEKVKRRLLSEQKEIEEAAERKKAREAKKLAKEIQVQKTKERAKQKKEEIESVKKWRKQRQQSGFAGEVDKGELDLAFEGGKSFERSNKKRPGVSPGDRSGGKARKSGGGDSGKGKKKKNRDFRNSKFGFGGKKSMKKQNTSDTTDDLRGFSKGDGAGNKRRKR
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccHHHcccccccccccccccccccccccccHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHccccccccccccccccccccccccccccccccccccccccccHHHHcccccccccccccccccHHHcccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccHHccccccccccHHHcccccccccccccccccccccEEEccHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHccccccccccccccccccccccccccccccccccccccccHHHHHHHccccccccccccccccccccccccccHccccccccccc
Coil and Loop (DISEMBL)
mglahkestfsdedgfededvSELNeevsesesdsegeedvklaepskqavynrdgleeklQDISWLENAGWIHKLTIDidqeqevdvnddlKREASFYTQALEGTRQAFEKLQsmglpflrpaDYYAEMVKSDAHMEKVKRRLLSEQKEIEEAAERKKAREAKKLAKEIQVQKTKERAKQKKEEIESVKKWRKQRQqsgfagevdkgeLDLAfeggksfersnkkrpgvspgdrsggkarksgggdsgkgkkkknrdfrnskfgfggkksmkkqntsdttddlrgfskgdgagnkrrkr
Flexible Loop (DISEMBL)
mglahkestfsdedgfedeDVSELNEevsesesdsegeedvklaepskqavynrdGLEEKLQDISWLENAGWIHKLTIDIDQEQEVDVNDDLKREASFYTQALEGTRQAFEKLQSMGLPFLRPADYYAEMVKSDAHMEKVKRRLLSEQKEIEEAAERKKAReakklakeiqvqktkerakqkkeeiesvkkwrkqrqqsgfagevdkgeLDLAFEggksfersnkkrpgvspgdrsggkarksgggdsgkgkkkknrdfrnskfgfggkksmkkqntsdttddlrgfskgdgagnkrrkr
Low Complexity Region (SEG)
MGLAHKESTFSDEDGFededvselneevsesesdsegeedvKLAEPSKQAVYNRDGLEEKLQDISWLENAGWIHKLTIDIDQEQEVDVNDDLKREASFYTQALEGTRQAFEKLQSMGLPFLRPADYYAEMVKSDAHMEKVKRRLLSEQkeieeaaerkkareakklakeiQVQKTKERAKQKKEEIESVKKWRKQRQQSGFAGEVDKGELDLAFEGGKSFERSNKKRPGVSPgdrsggkarksgggdsgkgkkkknrdFRNskfgfggkksmkkQNTSDTTDDLRGFSKGDGAGNKRRKR
Disordered region (IsUnstruct)
********************************************************LEEKLQDISWLENAGWIHKLTIDIDQEQEVDVNDDLKREASFYTQALEGTRQAFEKLQSMGLPFLRPADYYAEMV*************************************************************************************************************************************************************************
Disordered Region (DISOPRED)
**********************************************SKQAVYNRDGLEEKLQDISWLENAGWIHKLTIDIDQEQEVDVNDDLKREASFYTQALEGTRQAFEKLQSMGLPFLRPADYYAEMVKSDAHMEK*****************************************************************************************************************************************************************
Disordered Region (DISEMBL)
**********************************************SKQAVYNRDGLEEKLQDISWLENAGWIHKLTIDIDQEQEVDVNDDLKREASFYTQALEGTRQAFEKLQSMGLPFLRPADYYAEMVKSDAHMEKVKRRLLSEQKE*************************************************GFAGEVDKGELDLAFEGGKSFE**********************************NRDFRNSKFGFGG*************DDLRGFSK***********
Disordered Region (DISPRO)
***************************************DVKLAEPSKQAVYNRDGLEEKLQDISWLENAGWIH*********QEVDVNDDLKREASFYTQALEGTRQAFEKLQSMGLPFLRPADYYAEMVKSDAHMEKVKRRLLSEQKEIEEAAERKKAREAKKLAKEIQVQKTKERAKQKKEEIESVKKWRKQRQ*******************************************************************************************************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGLAHKESTFSDEDGFEDEDVSELNEEVSESESDSEGEEDVKLAEPSKQAVYNRDGLEEKLQDISWLENAGWIHKLTIDIDQEQEVDVNDDLKREASFYTQALEGTRQAFEKLQSMGLPFLRPADYYAEMVKSDAHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxIESVKKWRKQRQQSGFAGEVDKGELDLAFEGGKSFERSNKKRPGVSPGDRSGGKARKSGGGDSGKGKKKKNRDFRNSKFGFGGKKSMKKQNTSDTTDDLRGFSKGDGAGNKRRKR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	300	2.2.26 [Sep-21-2011]
Q9LUJ5	293	Probable rRNA-processing	yes	no	0.936	0.959	0.635	4e-93
O13802	333	Probable rRNA-processing	yes	no	0.73	0.657	0.338	4e-25
P36049	427	rRNA-processing protein E	yes	no	0.786	0.552	0.291	1e-23
Q9D903	306	Probable rRNA-processing	yes	no	0.77	0.754	0.313	4e-19
Q09958	340	Probable rRNA-processing	yes	no	0.486	0.429	0.388	1e-18
Q9I8J6	312	Probable rRNA-processing	N/A	no	0.626	0.602	0.283	2e-16
Q99848	306	Probable rRNA-processing	no	no	0.763	0.748	0.298	3e-16
Q9V9Z9	307	Probable rRNA-processing	yes	no	0.3	0.293	0.393	5e-10

>sp|Q9LUJ5|EBP2_ARATH Probable rRNA-processing protein EBP2 homolog OS=Arabidopsis thaliana GN=At3g22660 PE=2 SV=1

 Score =  341 bits (875), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 185/291 (63%), Positives = 224/291 (76%), Gaps = 10/291 (3%)

Query: 12  DEDGFEDEDVSELNEEVSESESDSEGEEDVKLAEPSKQAVYNRDGLEEKLQDISWLENAG 71
           DE    DED +  +E  S S+SD+E E   KLAEP+K A+YNRDGL +KLQDISW E+  
Sbjct: 11  DEMNMIDEDDATDSEAESLSDSDTENEITEKLAEPTKTAIYNRDGLLDKLQDISWPEDVD 70

Query: 72  WIHKLTIDIDQEQEVDVNDDLKREASFYTQALEGTRQAFEKLQSMGLPFLRPADYYAEMV 131
           W HKLT++IDQ   VDVNDDL RE +FYTQALEGTR+AF KL  MG+ FLRPA+YYAEMV
Sbjct: 71  WTHKLTVEIDQGGAVDVNDDLARETAFYTQALEGTREAFGKLNEMGVNFLRPANYYAEMV 130

Query: 132 KSDAHMEKVKRRLLSEQKEIEEAAERKKAREAKKLAKEIQVQKTKERAKQKKEEIESVKK 191
           KSD HMEKVK RLL E+K+IEE+ ER+KAR+ K++AKE+Q QK KERAK+KK+ IESVKK
Sbjct: 131 KSDVHMEKVKSRLLHEKKQIEESEERRKARDNKRMAKEVQSQKMKERAKEKKDNIESVKK 190

Query: 192 WRKQRQQSGFAGEVDKGELDLAFEGGKSFER-SNKKRPGVSPGDRSGGKARKSGGGDSGK 250
           WRKQRQQSGF+ +   GE +L FE GKSF+R   KKRPGVSPGDRSGGK R +    S  
Sbjct: 191 WRKQRQQSGFSDKA--GEPELDFESGKSFQRGGGKKRPGVSPGDRSGGKGRPT----SRM 244

Query: 251 GKKKKNRDFRNSKFGFGGKKSMKKQNTSDTTDDLR-GFSKGDGAGNKRRKR 300
           G KK  R+FR+SKFG GG+K + KQNT++TT+D + GF  G  +GNKR+KR
Sbjct: 245 GNKK--REFRDSKFGHGGRKGLSKQNTAETTNDFKGGFRGGKASGNKRQKR 293

Required for the processing of the 27S pre-rRNA.
Arabidopsis thaliana (taxid: 3702)

>sp|O13802|EBP2_SCHPO Probable rRNA-processing protein ebp2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ebp2 PE=1 SV=1

 Score =  115 bits (288), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 88/260 (33%), Positives = 129/260 (49%), Gaps = 41/260 (15%)

Query: 33  SDSEG---EEDVKLAEPSKQAVYNRDGLE---EKLQ---DISWLENAGWIHKLTIDIDQE 83
           SD EG   EED  L    K A+ N   LE   E+++   DIS++EN     K  I I+  
Sbjct: 73  SDLEGIELEEDADLIRKRKLAINNTVALENIYERIKYPDDISFVENQAVTTKEPIIIE-- 130

Query: 84  QEVDVNDDLKREASFYTQALEGTRQAFEKLQSMGLPFLRPADYYAEMVKSDAHMEKVKRR 143
              +V DDL RE +FY Q +   + AF KL+   +   RP DY+AEM+KSD HMEKV++ 
Sbjct: 131 ---NVEDDLARELAFYKQGVSSVKAAFAKLREANVLISRPHDYFAEMLKSDDHMEKVRQE 187

Query: 144 LLSEQKEIEEAAERKKAREAKKLAKEIQVQKTKERAKQKKEEIESVKKWRKQRQQSGFAG 203
           L+ E    + + + KK RE KK  K++Q+ K +ER ++KKE +E +   +++        
Sbjct: 188 LIKEATAKKLSQQAKKQRELKKFGKQVQLAKQEERQREKKETLEKINLLKRKHTGGDLTT 247

Query: 204 EVDKGELDLAFEGGKSFE---RSNKKRPGVSPGDRSGGKARKSGGGDSGKGKKKKNRDFR 260
           E D  ++ L+     +F+   RS K RP  +P                        R  +
Sbjct: 248 E-DDFDIALSSASADTFKKGSRSTKSRPQPNP-----------------------KRQKK 283

Query: 261 NSKFGFGGKKSMKKQNTSDT 280
           N K+GFGG K   K N  D+
Sbjct: 284 NEKYGFGGPKHRSKSNDLDS 303

Required for the processing of the 27S pre-rRNA.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|P36049|EBP2_YEAST rRNA-processing protein EBP2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=EBP2 PE=1 SV=1

 Score =  110 bits (275), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 82/281 (29%), Positives = 144/281 (51%), Gaps = 45/281 (16%)

Query: 33  SDSEGEEDVKLAEPSKQAVYNRDGLEEKLQ--DISWLENAGWIHK-LTIDIDQEQEV-DV 88
           SD E + D  +    K  V N   ++  L+   + W +++   H+ +T + + ++ + D+
Sbjct: 177 SDVEFDSDADVVPHHKLTVNNTKAMKHALERVQLPWKKHSFQEHQSVTSETNTDEHIKDI 236

Query: 89  NDDLKREASFYTQALEGTRQAFEKLQSMGLPFLRPADYYAEMVKSDAHMEKVKRRLLSEQ 148
            DD +RE +FY Q+L+    A ++L+ + +PF RP DY+AEMVKSD HM+K+K +L+ E 
Sbjct: 237 YDDTERELAFYKQSLDAVLVARDELKRLKVPFKRPLDYFAEMVKSDEHMDKIKGKLIEEA 296

Query: 149 KEIEEAAERKKAREAKKLAKEIQVQKTKERAKQKKEEIESVKKWRKQRQQSGFAGEVDKG 208
            + +   E ++ R+ KK  K++Q    ++R  +K+E +E +K  + +R+ +    E+D  
Sbjct: 297 SDKKAREEARRQRQLKKFGKQVQNATLQKRQLEKRETLEKIKSLKNKRKHN----EIDHS 352

Query: 209 ELDLAFE---GGKSFERSNKKRPGVSPGDRSGGKARKSGGGDSGKGKKKKNRDFRNSKFG 265
           E ++  E    GK F+R            R  GK                 R  +N+K+G
Sbjct: 353 EFNVGVEEEVEGKRFDRG-----------RPNGK-----------------RAAKNAKYG 384

Query: 266 FGGKKSMKKQNTSDTTDDLRGFS------KGDGAGNKRRKR 300
            GG K  K++N + ++ D+ GFS      K +  G  RR R
Sbjct: 385 QGGMKRFKRKNDATSSADVSGFSSRKMKGKTNRPGKSRRAR 425

Required for the processing of the 27S pre-rRNA. Probably involved in the step of the processing of the 27 SA precursor into the 27 SB intermediate.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|Q9D903|EBP2_MOUSE Probable rRNA-processing protein EBP2 OS=Mus musculus GN=Ebna1bp2 PE=2 SV=1

 Score = 95.5 bits (236), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 86/274 (31%), Positives = 147/274 (53%), Gaps = 43/274 (15%)

Query: 40  DVKLAEPSKQAVYNRDGLEEKL----QDISWLE----NAGWIHKLT------IDIDQEQE 85
           +V L +P K+AV +  GL++ L    +D+ W+E      G + +++       + DQ++ 
Sbjct: 37  NVVLEKP-KKAVNDVSGLKQCLAEFRRDLEWVERLDVTLGPVPEVSETQPTPQNQDQKKG 95

Query: 86  VDVNDDLKREASFYTQALEGTRQAFEKLQSMGLPFLRPADYYAEMVKSDAHMEKVKRRLL 145
           V+  DD +RE SFY QA         +L  + +P  RP DY+AEM KSD  M+K++++L 
Sbjct: 96  VNPEDDFQREMSFYRQAQAAVLAVLPRLHQLQVPTKRPTDYFAEMAKSDQQMQKIRQKLQ 155

Query: 146 SEQKEIEEAAERKKAREAKKLAKEIQVQKTKERAKQKKEEIESVKKWRKQRQQSGFAGEV 205
           ++Q  +E++ + K+ R  +K  K++Q +  ++R ++K   + ++KK++K     GF+ ++
Sbjct: 156 TKQAAMEKSEKAKQLRALRKYGKKVQTEVLQKRQREKAHMMNAIKKYQK-----GFSDKL 210

Query: 206 DKGELDLAFEGGKSFERSNKKRPGVSPGDRSGGKARKSGGGDSGKGKKKKNRDFRNSKFG 265
           D  E D      K  ERS K          +GGK ++   G + K      R ++N KFG
Sbjct: 211 DFLEGD-----QKPVERSAK----------AGGKGQQMSKGPNAK------RRYKNQKFG 249

Query: 266 FGGKKSMKKQNTSDTTDDLRGFSK--GDGAGNKR 297
           FGGKK   K NT ++ DD+  F      G G++R
Sbjct: 250 FGGKKKGSKWNTKESYDDVSSFRAKVAHGKGSRR 283

Required for the processing of the 27S pre-rRNA.

Mus musculus (taxid: 10090)

>sp|Q09958|EBP2_CAEEL Probable rRNA-processing protein EBP2 homolog OS=Caenorhabditis elegans GN=C18A3.3 PE=1 SV=2

 Score = 94.0 bits (232), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/157 (38%), Positives = 95/157 (60%), Gaps = 11/157 (7%)

Query: 48  KQAVYNRDG-LEEKLQDISWLENAGWIHKLTIDIDQEQEVDV---NDDLKREASFYTQAL 103
           K+ + N+   ++EKL +I+  ++  W+  L + +    E+D    NDD +RE +FY QA 
Sbjct: 82  KRPIINKSAEMKEKLAEIT--KDLPWVETLEV-VTPHSEMDKKVENDDFQRELNFYKQAE 138

Query: 104 EGTRQAFEKLQSMGLPFLRPADYYAEMVKSDAHMEKVKRRLL--SEQKEIEEAAERKKAR 161
           +  + A+ +L ++G+  LRP DYYAEM KSD HM+KV++RLL   E KE +EA  R   R
Sbjct: 139 KAVQIAYPRLLNLGIKVLRPTDYYAEMAKSDTHMQKVRKRLLGIQEMKERQEAFRR--IR 196

Query: 162 EAKKLAKEIQVQKTKERAKQKKEEIESVKKWRKQRQQ 198
           E KK A ++Q +    +  +KK   E+VKK +K  +Q
Sbjct: 197 EEKKFAVKVQKEVLAAKNTEKKNLAEAVKKHKKGMKQ 233

Required for the processing of the 27S pre-rRNA.

Caenorhabditis elegans (taxid: 6239)

>sp|Q9I8J6|EBP2_XENLA Probable rRNA-processing protein EBP2 OS=Xenopus laevis GN=ebna1bp2 PE=2 SV=1

 Score = 86.3 bits (212), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 110/208 (52%), Gaps = 20/208 (9%)

Query: 3   LAHKESTFSDEDGFEDEDVSELNE-EVSESESDSEGEEDVKLAEPSKQAVYN-RDGLEEK 60
           L H++ +  + D   D D SEL + E+ E+ S  + +  + +    K+  +N   GL++ 
Sbjct: 2   LHHEDESSPESDS--DFDASELTDKELQEAFSQGKLKPGLNVVLEGKKKPFNDASGLKQS 59

Query: 61  LQDISWLENAGWIHKLTIDID-------QEQEVDVN-------DDLKREASFYTQALEGT 106
           L+D+       W+ +L + +D       Q  + D N       DD +RE  FY QA    
Sbjct: 60  LKDLK--NELPWVERLDVTVDPVVDTTGQNGQTDPNTSDINAEDDFQREMCFYRQAQAAV 117

Query: 107 RQAFEKLQSMGLPFLRPADYYAEMVKSDAHMEKVKRRLLSEQKEIEEAAERKKAREAKKL 166
             +  +L+ + +   RP DY+AEM K+D HM+K++ +L  +Q  +E++ + K+ R  +K 
Sbjct: 118 LYSLPRLRKLKVATKRPDDYFAEMAKTDQHMQKIRHKLQLKQASMEKSEKAKQLRALRKY 177

Query: 167 AKEIQVQKTKERAKQKKEEIESVKKWRK 194
            K++QV+  ++R K+K   +  +KK++K
Sbjct: 178 GKKVQVEVLQKRQKEKSAMVTQIKKYQK 205

Required for the processing of the 27S pre-rRNA.

Xenopus laevis (taxid: 8355)

>sp|Q99848|EBP2_HUMAN Probable rRNA-processing protein EBP2 OS=Homo sapiens GN=EBNA1BP2 PE=1 SV=2

 Score = 85.9 bits (211), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 81/271 (29%), Positives = 133/271 (49%), Gaps = 42/271 (15%)

Query: 43  LAEPSKQAVYNRDGLEEKL----QDISWLENAGWIHKLTIDI----------DQEQEVDV 88
           + E  K+AV + +GL++ L    +D+ W+E          +I            ++ VD 
Sbjct: 39  VLEGPKKAVNDVNGLKQCLAEFKRDLEWVERLDVTLGPVPEIGGSEAPAPQNKDQKAVDP 98

Query: 89  NDDLKREASFYTQALEGTRQAFEKLQSMGLPFLRPADYYAEMVKSDAHMEKVKRRLLSEQ 148
            DD +RE SFY QA         +L  + +P  RP DY+AEM KSD  M+K++++L ++Q
Sbjct: 99  EDDFQREMSFYRQAQAAVLAVLPRLHQLKVPTKRPTDYFAEMAKSDLQMQKIRQKLQTKQ 158

Query: 149 KEIEEAAERKKAREAKKLAKEIQVQKTKERAKQKKEEIESVKKWRKQRQQSGFAGEVDKG 208
             +E + + K+ R  +K  K++Q +  ++R ++K   + ++KK+     Q GF+ ++D  
Sbjct: 159 AAMERSEKAKQLRALRKYGKKVQTEVLQKRQQEKAHMMNAIKKY-----QKGFSDKLD-- 211

Query: 209 ELDLAFEGGKSFERSNKKRPGVSPGDRSGGKARKSGGGDSGKGKKKKNRDFRNSKFGFGG 268
                 EG +      KK         +G K ++   G S K      R ++N KFGFGG
Sbjct: 212 ----FLEGDQKPLAQRKK---------AGAKGQQMRKGPSAK------RRYKNQKFGFGG 252

Query: 269 KKSMKKQNTSDTTDDLRGF--SKGDGAGNKR 297
           KK   K NT ++ DD+  F      G G KR
Sbjct: 253 KKKGSKWNTRESYDDVSSFRAKTAHGRGLKR 283

Required for the processing of the 27S pre-rRNA.

Homo sapiens (taxid: 9606)

>sp|Q9V9Z9|EBP2_DROME Probable rRNA-processing protein EBP2 homolog OS=Drosophila melanogaster GN=CG1542 PE=2 SV=1

 Score = 65.5 bits (158), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 37/94 (39%), Positives = 57/94 (60%), Gaps = 4/94 (4%)

Query: 88  VNDDLKREASFYTQALEGTRQAFEKLQSMGLPFLRPADYYAEMVKSDAHMEKVKRRLLSE 147
           V +D KRE  F+ QA     +A  +L  +G+   RP DY+AEM KSD HM+KV+  L+++
Sbjct: 114 VLNDFKREMLFHRQAQSAVLEAIPRLHELGIKTRRPDDYFAEMAKSDEHMQKVRANLMAK 173

Query: 148 QKEIEEAAERKKAREAKK----LAKEIQVQKTKE 177
           Q+   ++   K+ RE +K    LAK+ +VQ+  E
Sbjct: 174 QQGQAKSERIKQIREQRKMGKMLAKQTKVQREAE 207


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.306    0.127    0.344 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 120,733,181
Number of Sequences: 539616
Number of extensions: 5701962
Number of successful extensions: 51123
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 484
Number of HSP's successfully gapped in prelim test: 2029
Number of HSP's that attempted gapping in prelim test: 39167
Number of HSP's gapped (non-prelim): 9183
length of query: 300
length of database: 191,569,459
effective HSP length: 117
effective length of query: 183
effective length of database: 128,434,387
effective search space: 23503492821
effective search space used: 23503492821
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (22.0 bits)
S2: 61 (28.1 bits)

Required for the processing of the 27S pre-rRNA.

Drosophila melanogaster (taxid: 7227)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	300
224134537	300	predicted protein [Populus trichocarpa]	0.996	0.996	0.677	1e-104
357484899	279	hypothetical protein MTR_5g028350 [Medic	0.886	0.953	0.725	1e-102
255570978	307	rRNA-processing protein EBP2, putative [	1.0	0.977	0.644	1e-102
225455559	302	PREDICTED: probable rRNA-processing prot	1.0	0.993	0.688	1e-100
356576777	287	PREDICTED: probable rRNA-processing prot	0.853	0.891	0.742	2e-95
359806727	287	uncharacterized protein LOC100805013 [Gl	0.86	0.898	0.725	3e-94
449451821	312	PREDICTED: probable rRNA-processing prot	1.0	0.961	0.625	8e-94
449488602	311	PREDICTED: probable rRNA-processing prot	1.0	0.964	0.647	2e-92
297835268	294	hypothetical protein ARALYDRAFT_479780 [	0.936	0.955	0.632	5e-92
15228822	293	putative rRNA-processing protein EBP2-li	0.936	0.959	0.635	2e-91

>gi|224134537|ref|XP_002321847.1| predicted protein [Populus trichocarpa] gi|222868843|gb|EEF05974.1| predicted protein [Populus trichocarpa]

 Score =  383 bits (984), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 204/301 (67%), Positives = 241/301 (80%), Gaps = 2/301 (0%)

Query: 1   MGLAHKESTFSDEDGFEDEDVSELNEEVSESESDSEGEEDVKLAEPSKQAVYNRDGLEEK 60
           M +  +E T SDE+   D+++  L+E++S SES+SE +E VKL EPSK A++NRDGL +K
Sbjct: 1   MVVNKEELTLSDEELITDDEMDNLDEKLSGSESESE-DEGVKLPEPSKNAIFNRDGLADK 59

Query: 61  LQDISWLENAGWIHKLTIDIDQEQEVDVNDDLKREASFYTQALEGTRQAFEKLQSMGLPF 120
           LQDISW EN GWIHKL ID +QEQEVDVNDDL RE +FYTQALEGTRQA+ KL+SMG+PF
Sbjct: 60  LQDISWPENVGWIHKLVIDFNQEQEVDVNDDLTRELAFYTQALEGTRQAYAKLESMGIPF 119

Query: 121 LRPADYYAEMVKSDAHMEKVKRRLLSEQKEIEEAAERKKAREAKKLAKEIQVQKTKERAK 180
           LRP DYYAEM KSD HMEKVK RLL+E++ IEEA ER+KAR++KKLAKE+Q QK KER  
Sbjct: 120 LRPPDYYAEMAKSDTHMEKVKGRLLAEKRSIEEAEERRKARDSKKLAKEVQAQKQKERNA 179

Query: 181 QKKEEIESVKKWRKQRQQSGFAGEVDKGELDLAFEGGKSFERSNKKRPGVSPGDRSGGKA 240
           QKK  IE+VK WRKQR+QSGFAG    GELD+ FE GK FERSNKKRPGVSPGDRSGGK 
Sbjct: 180 QKKAAIETVKNWRKQRKQSGFAGGDKDGELDMPFEDGKVFERSNKKRPGVSPGDRSGGKG 239

Query: 241 RKSG-GGDSGKGKKKKNRDFRNSKFGFGGKKSMKKQNTSDTTDDLRGFSKGDGAGNKRRK 299
           R+    G +G  KKK  R+ R+SKFGFGG+K +KKQNT+DTTDD RG  KG  AGNK+RK
Sbjct: 240 RQPWKKGKNGPEKKKFKRESRDSKFGFGGRKGLKKQNTADTTDDFRGSKKGSAAGNKKRK 299

Query: 300 R 300
           R
Sbjct: 300 R 300

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357484899|ref|XP_003612737.1| hypothetical protein MTR_5g028350 [Medicago truncatula] gi|355514072|gb|AES95695.1| hypothetical protein MTR_5g028350 [Medicago truncatula]

 Score =  377 bits (969), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 198/273 (72%), Positives = 227/273 (83%), Gaps = 7/273 (2%)

Query: 28  VSESESDSEGEEDVKLAEPSKQAVYNRDGLEEKLQDISWLENAGWIHKLTIDIDQEQEVD 87
           +S  ESDSE  EDVKLAEPSK AV NRD + +KL DISW EN  W HKL+IDIDQ QEVD
Sbjct: 13  MSPFESDSE--EDVKLAEPSKTAVNNRDAILDKLGDISWPENVDWKHKLSIDIDQGQEVD 70

Query: 88  VNDDLKREASFYTQALEGTRQAFEKLQSMGLPFLRPADYYAEMVKSDAHMEKVKRRLLSE 147
           VNDDL RE SFYTQALEGTRQAFEKL+SMGLPFLRPADYYAEMVK D+HMEKVK RLL E
Sbjct: 71  VNDDLARELSFYTQALEGTRQAFEKLESMGLPFLRPADYYAEMVKGDSHMEKVKSRLLDE 130

Query: 148 QKEIEEAAERKKAREAKKLAKEIQVQKTKERAKQKKEEIESVKKWRKQRQQSGFAGEVDK 207
           ++++EEA ER+KAREAK+L+KE+Q QK KERAKQKK++IESVKKWRKQRQQSGFA   D 
Sbjct: 131 KRKMEEADERRKAREAKRLSKEVQSQKLKERAKQKKDDIESVKKWRKQRQQSGFADGADA 190

Query: 208 GELDLAFEGGKSFERSNKKRPGVSPGDRSGGKARKSGGGDSGKGKK-KKNRDFRNSKFGF 266
            +  L+FE GK FERS KKRPGVSPGDRSGGKA+++     GKGKK +K RD +N+KFGF
Sbjct: 191 PDKSLSFEDGKVFERSKKKRPGVSPGDRSGGKAKQA----MGKGKKPQKKRDTKNAKFGF 246

Query: 267 GGKKSMKKQNTSDTTDDLRGFSKGDGAGNKRRK 299
           GG+K  KKQNT+DTT+D  GFSKG  AGNKR++
Sbjct: 247 GGRKGSKKQNTADTTNDFGGFSKGSAAGNKRKR 279

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255570978|ref|XP_002526440.1| rRNA-processing protein EBP2, putative [Ricinus communis] gi|223534220|gb|EEF35935.1| rRNA-processing protein EBP2, putative [Ricinus communis]

 Score =  376 bits (966), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 198/307 (64%), Positives = 239/307 (77%), Gaps = 7/307 (2%)

Query: 1   MGLAHKESTFSDEDGFEDEDVSELN-----EEVSESESDSEGEEDVKLAEPSKQAVYNRD 55
           MG   K+ T  DE+  +DE++  ++      E          EEDVKL+EPSK AVYNRD
Sbjct: 1   MGARDKDLTAYDEEPIDDEEIDNIDGDESDSEYESEPESESEEEDVKLSEPSKNAVYNRD 60

Query: 56  GLEEKLQDISWLENAGWIHKLTIDIDQEQEVDVNDDLKREASFYTQALEGTRQAFEKLQS 115
            L +KLQDISW EN  WIHKL++DI+QEQEVDVNDDL RE +FYTQALEGTR+AFEKL++
Sbjct: 61  ALNDKLQDISWPENVSWIHKLSVDIEQEQEVDVNDDLARELAFYTQALEGTRKAFEKLET 120

Query: 116 MGLPFLRPADYYAEMVKSDAHMEKVKRRLLSEQKEIEEAAERKKAREAKKLAKEIQVQKT 175
           MGLPFLRP+DYYAEMVKSD HMEKVK RLL+E++ IEEA ER+KARE+K+LAKEIQ QK 
Sbjct: 121 MGLPFLRPSDYYAEMVKSDIHMEKVKGRLLAEKRNIEEAEERRKARESKRLAKEIQAQKQ 180

Query: 176 KERAKQKKEEIESVKKWRKQRQQSGFAGEVDKGELDLAFEGGKSFERSNKKRPGVSPGDR 235
           KERA QKK EIE+VKKWRKQRQQSGFAG    GE++L FE G++  R NK+RPGVSPGDR
Sbjct: 181 KERAAQKKMEIENVKKWRKQRQQSGFAGGDKDGEMNLPFENGEALGRPNKRRPGVSPGDR 240

Query: 236 SGGKARKSGGGDSGKG--KKKKNRDFRNSKFGFGGKKSMKKQNTSDTTDDLRGFSKGDGA 293
           SGGK+R+     S KG   K+  RD R+S+FG+GG+K +KKQNT+DTT +LRGF+KG   
Sbjct: 241 SGGKSRQDWKKGSKKGFENKQNKRDARDSRFGYGGRKGLKKQNTADTTGNLRGFNKGGLQ 300

Query: 294 GNKRRKR 300
           GNK+RKR
Sbjct: 301 GNKKRKR 307

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225455559|ref|XP_002267474.1| PREDICTED: probable rRNA-processing protein EBP2 homolog [Vitis vinifera]

 Score =  370 bits (949), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 208/302 (68%), Positives = 253/302 (83%), Gaps = 2/302 (0%)

Query: 1   MGLAHKESTFSDEDGFEDEDVSELNEEVSESESDSEGEEDVKLAEPSKQAVYNRDGLEEK 60
           M +  ++ T SDED  ED +  +L EE SE ES+SE +EDVKLAEPSK ++YN+DGL +K
Sbjct: 1   MVVRKEDPTLSDEDMMEDNETGDLYEEESELESESEEDEDVKLAEPSKTSIYNKDGLLDK 60

Query: 61  LQDISWLENAGWIHKLTIDIDQEQEVDVNDDLKREASFYTQALEGTRQAFEKLQSMGLPF 120
           L DISW EN GWIHKL+I+IDQEQEVDVNDD  RE SF   AL+GTRQAFE LQSMGLPF
Sbjct: 61  LGDISWPENVGWIHKLSINIDQEQEVDVNDDSAREGSFSILALKGTRQAFENLQSMGLPF 120

Query: 121 LRPADYYAEMVKSDAHMEKVKRRLLSEQKEIEEAAERKKAREAKKLAKEIQVQKTKERAK 180
           LRP+DYYAEMVK+D+HMEKVK RLL+++K+IEEA ER+KAREAK++AKE+Q QK KERAK
Sbjct: 121 LRPSDYYAEMVKTDSHMEKVKGRLLAQKKQIEEADERRKAREAKRIAKEVQSQKLKERAK 180

Query: 181 QKKEEIESVKKWRKQRQQSGFAGEVDKG-ELDLAFEGGKSFERSNKKRPGVSPGDRSGGK 239
           QKKE+IESVK+WRKQRQQSGF+ + ++  E+ LAFE GK+FERSNK+RPGV+PGDRSGGK
Sbjct: 181 QKKEDIESVKRWRKQRQQSGFSKDNNEADEMSLAFEDGKAFERSNKRRPGVAPGDRSGGK 240

Query: 240 ARKSGG-GDSGKGKKKKNRDFRNSKFGFGGKKSMKKQNTSDTTDDLRGFSKGDGAGNKRR 298
           AR+ GG G  G  K KK RD +NSKFGFGG+K +KKQN+++TTDD RGF+KG+  GNK+R
Sbjct: 241 ARQFGGNGKKGMEKNKKKRDNKNSKFGFGGRKGLKKQNSTETTDDFRGFNKGESTGNKKR 300

Query: 299 KR 300
           KR
Sbjct: 301 KR 302

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356576777|ref|XP_003556506.1| PREDICTED: probable rRNA-processing protein EBP2 homolog [Glycine max]

 Score =  355 bits (910), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 193/260 (74%), Positives = 221/260 (85%), Gaps = 4/260 (1%)

Query: 40  DVKLAEPSKQAVYNRDGLEEKLQDISWLENAGWIHKLTIDIDQEQEVDVNDDLKREASFY 99
           DV+LAEPSK AVYNRD L +KL DISW  N  WIHKL+ID+DQEQEVDVNDDL RE +FY
Sbjct: 32  DVRLAEPSKNAVYNRDALLDKLGDISWPANVEWIHKLSIDVDQEQEVDVNDDLARELAFY 91

Query: 100 TQALEGTRQAFEKLQSMGLPFLRPADYYAEMVKSDAHMEKVKRRLLSEQKEIEEAAERKK 159
           TQALEGT++AFEKLQSMGLPFLRPADYYAEMVK+D HMEKVK RLLSE++++EEA ER+K
Sbjct: 92  TQALEGTKEAFEKLQSMGLPFLRPADYYAEMVKTDGHMEKVKGRLLSEKRKMEEADERRK 151

Query: 160 AREAKKLAKEIQVQKTKERAKQKKEEIESVKKWRKQRQQSGFAGEVDKGELDLAFEGGKS 219
           AREAK+LAKEIQ QK KERAKQKKE+IESVKKWRKQRQQSG+A      ++   FE GK 
Sbjct: 152 AREAKRLAKEIQAQKLKERAKQKKEDIESVKKWRKQRQQSGYADNGKDADMGFDFEDGKV 211

Query: 220 FERSNKKRPGVSPGDRSGGKARKSGGGDSGKGKKKKNRDFRNSKFGFGGKKSMKKQNTSD 279
           FERSNKKRPGVSPGDRSGGKA+++     GKGKK+K RD +NSKFGFGGKK MKKQNT+D
Sbjct: 212 FERSNKKRPGVSPGDRSGGKAKQA----FGKGKKQKIRDGKNSKFGFGGKKGMKKQNTAD 267

Query: 280 TTDDLRGFSKGDGAGNKRRK 299
           TT+D   F+KG  AGNKR++
Sbjct: 268 TTNDFGKFNKGAVAGNKRKR 287

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359806727|ref|NP_001241039.1| uncharacterized protein LOC100805013 [Glycine max] gi|255634741|gb|ACU17732.1| unknown [Glycine max]

 Score =  351 bits (900), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 190/262 (72%), Positives = 220/262 (83%), Gaps = 4/262 (1%)

Query: 38  EEDVKLAEPSKQAVYNRDGLEEKLQDISWLENAGWIHKLTIDIDQEQEVDVNDDLKREAS 97
           +EDVKL EPSK AVYNRD L +KL DISW EN  WIHKL++D+DQEQEVDVNDDL RE +
Sbjct: 30  DEDVKLTEPSKNAVYNRDALLDKLGDISWPENVEWIHKLSVDVDQEQEVDVNDDLARELA 89

Query: 98  FYTQALEGTRQAFEKLQSMGLPFLRPADYYAEMVKSDAHMEKVKRRLLSEQKEIEEAAER 157
           FYTQALEGT++AFEK QSMGLPFLRPADYYAEMVK+D HM KVK RLL+E++++EEA ER
Sbjct: 90  FYTQALEGTKEAFEKFQSMGLPFLRPADYYAEMVKTDGHMVKVKGRLLAEKRKMEEADER 149

Query: 158 KKAREAKKLAKEIQVQKTKERAKQKKEEIESVKKWRKQRQQSGFAGEVDKGELDLAFEGG 217
           +KAREAK+LAKEIQ QK KERAKQKKE+IESVKKWRKQRQQSG+A      ++   FE G
Sbjct: 150 RKAREAKRLAKEIQAQKLKERAKQKKEDIESVKKWRKQRQQSGYADNGKDADMGFDFEDG 209

Query: 218 KSFERSNKKRPGVSPGDRSGGKARKSGGGDSGKGKKKKNRDFRNSKFGFGGKKSMKKQNT 277
           K FERSNKKRPGVSPGDRSGGKA+ +     GKGKK+K RD +NSKFGFGGKK MKKQNT
Sbjct: 210 KVFERSNKKRPGVSPGDRSGGKAKLA----FGKGKKQKKRDGKNSKFGFGGKKGMKKQNT 265

Query: 278 SDTTDDLRGFSKGDGAGNKRRK 299
           +DTTDD   ++KG  +GNKR++
Sbjct: 266 ADTTDDFGKYNKGAVSGNKRKR 287

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449451821|ref|XP_004143659.1| PREDICTED: probable rRNA-processing protein EBP2 homolog [Cucumis sativus]

 Score =  349 bits (896), Expect = 8e-94,   Method: Compositional matrix adjust.
 Identities = 194/310 (62%), Positives = 233/310 (75%), Gaps = 10/310 (3%)

Query: 1   MGLAHKESTFSDEDGFEDEDVSELNEEVSESESDSEGEEDVKLAE-----PSKQAVYNRD 55
           MG++ K+++F +ED  ED D S  + E         G E+ +  +     PSK A+YN D
Sbjct: 1   MGVSIKDASFLNEDTVEDGDFSSEDSEFESESESGSGSEEEEEEDVELSEPSKNAIYNAD 60

Query: 56  GLEEKLQDISWLENAGWIHKLTIDIDQEQEVDVNDDLKREASFYTQALEGTRQAFEKLQS 115
           GL +KL DISW EN  WIHKLT DI+QE+EVDVNDDL RE +FYTQAL+GTR A EK QS
Sbjct: 61  GLLDKLGDISWPENVEWIHKLTFDIEQEKEVDVNDDLTRELAFYTQALQGTRMALEKFQS 120

Query: 116 MGLPFLRPADYYAEMVKSDAHMEKVKRRLLSEQKEIEEAAERKKAREAKKLAKEIQVQKT 175
           +GLPFLRP+DYYAEMVK+D HM+KVK RLLSEQ+++EEA ER+KAREAKKLAKEIQ QK 
Sbjct: 121 LGLPFLRPSDYYAEMVKTDTHMQKVKGRLLSEQRKMEEAEERRKAREAKKLAKEIQAQKQ 180

Query: 176 KERAKQKKEEIESVKKWRKQRQQSGFAGEVDKGELDLAFEGGKSFERS-NKKRPGVSPGD 234
           KERAKQKKEEIESVKKWRKQRQ++ FAG    G++D +FE GK+FERS  KKRPGVSPGD
Sbjct: 181 KERAKQKKEEIESVKKWRKQRQKNNFAGGDKGGDMDFSFEDGKTFERSGGKKRPGVSPGD 240

Query: 235 RS----GGKARKSGGGDSGKGKKKKNRDFRNSKFGFGGKKSMKKQNTSDTTDDLRGFSKG 290
           RS           GGG       KK RDFR+SKFGFGG+KS+KKQNT+DTT+D+RGF+ G
Sbjct: 241 RSGGKARHGGGGGGGGGGKGKIPKKKRDFRDSKFGFGGRKSLKKQNTADTTNDIRGFNNG 300

Query: 291 DGAGNKRRKR 300
             + NKRRK+
Sbjct: 301 SLSSNKRRKK 310

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449488602|ref|XP_004158107.1| PREDICTED: probable rRNA-processing protein EBP2 homolog [Cucumis sativus]

 Score =  344 bits (883), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 200/309 (64%), Positives = 239/309 (77%), Gaps = 9/309 (2%)

Query: 1   MGLAHKESTFSDEDGFEDEDVSELNEEVSESESDSEGEEDVKLAE-----PSKQAVYNRD 55
           MG++ K+++F +ED  ED D S  + E         G E+ +  +     PSK A+YN D
Sbjct: 1   MGVSIKDASFLNEDTVEDGDFSSEDSEFESESESGSGSEEEEEEDVELSEPSKNAIYNAD 60

Query: 56  GLEEKLQDISWLENAGWIHKLTIDIDQEQEVDVNDDLKREASFYTQALEGTRQAFEKLQS 115
           GL +KL DISW EN  WIHKLT DI+QE+EVDVNDDL RE +FYTQAL+GTR A EK QS
Sbjct: 61  GLLDKLGDISWPENVEWIHKLTFDIEQEKEVDVNDDLTRELAFYTQALQGTRMALEKFQS 120

Query: 116 MGLPFLRPADYYAEMVKSDAHMEKVKRRLLSEQKEIEEAAERKKAREAKKLAKEIQVQKT 175
           +GLPFLRP+DYYAEMVK+D HM+KVK RLLSEQ+++EEA ER+KAREAKKLAKEIQ QK 
Sbjct: 121 LGLPFLRPSDYYAEMVKTDTHMQKVKGRLLSEQRKMEEAEERRKAREAKKLAKEIQAQKQ 180

Query: 176 KERAKQKKEEIESVKKWRKQRQQSGFAGEVDKGELDLAFEGGKSFERS-NKKRPGVSPGD 234
           KERAKQKKEEIESVKKWRKQRQ++ FAG    G++D +FE GK+FERS  KKRPGVSPGD
Sbjct: 181 KERAKQKKEEIESVKKWRKQRQKNNFAGGDKGGDMDFSFEDGKTFERSGGKKRPGVSPGD 240

Query: 235 RSGGKARKSGGGDSGKGKKKKNRD---FRNSKFGFGGKKSMKKQNTSDTTDDLRGFSKGD 291
           RSGGKAR  GGG  G G  K NR    FR+SKFGFGG+KS+KKQNT+DTT+D+RGF+ G 
Sbjct: 241 RSGGKARHGGGGGGGGGGGKGNRRKERFRDSKFGFGGRKSLKKQNTADTTNDIRGFNNGS 300

Query: 292 GAGNKRRKR 300
            + NKRRK+
Sbjct: 301 LSSNKRRKK 309

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297835268|ref|XP_002885516.1| hypothetical protein ARALYDRAFT_479780 [Arabidopsis lyrata subsp. lyrata] gi|297331356|gb|EFH61775.1| hypothetical protein ARALYDRAFT_479780 [Arabidopsis lyrata subsp. lyrata]

 Score =  343 bits (880), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 184/291 (63%), Positives = 221/291 (75%), Gaps = 10/291 (3%)

Query: 12  DEDGFEDEDVSELNEEVSESESDSEGEEDVKLAEPSKQAVYNRDGLEEKLQDISWLENAG 71
           DE    DED +  +E  S S+SD+E E   KLAEP+K AVYNRDGL +KLQDISW E+  
Sbjct: 11  DEMNMIDEDSATDSEAESLSDSDTENEITEKLAEPTKTAVYNRDGLLDKLQDISWPEDVD 70

Query: 72  WIHKLTIDIDQEQEVDVNDDLKREASFYTQALEGTRQAFEKLQSMGLPFLRPADYYAEMV 131
           W HKLT++IDQ Q VDVNDDL RE +FYTQALEGTR+AF KL  MG+ FLRPA+YYAEMV
Sbjct: 71  WTHKLTVEIDQGQAVDVNDDLAREMAFYTQALEGTREAFGKLNEMGVNFLRPANYYAEMV 130

Query: 132 KSDAHMEKVKRRLLSEQKEIEEAAERKKAREAKKLAKEIQVQKTKERAKQKKEEIESVKK 191
           KSD HMEKVK RLL E+K+IEE+ ER+KAR+ K++AKE+Q QK KERAKQKK++IESVKK
Sbjct: 131 KSDIHMEKVKSRLLHEKKQIEESEERRKARDNKRMAKEVQSQKMKERAKQKKDDIESVKK 190

Query: 192 WRKQRQQSGFAGEVDKGELDLAFEGGKSFER-SNKKRPGVSPGDRSGGKARKSGGGDSGK 250
           WRKQRQQSGF+ E    ELD  FE GKSF+R   KKRPGVSPGDRSGGK R +       
Sbjct: 191 WRKQRQQSGFSDEAGAPELD--FESGKSFQRGGGKKRPGVSPGDRSGGKGRPTS------ 242

Query: 251 GKKKKNRDFRNSKFGFGGKKSMKKQNTSDTTDDLR-GFSKGDGAGNKRRKR 300
               K R+FR+SKFG GG+K + KQNT++TT+D R GF  G  +GN +R++
Sbjct: 243 RMSNKKREFRDSKFGHGGRKGLSKQNTAETTNDFRGGFRGGRASGNNKRQK 293

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15228822|ref|NP_188905.1| putative rRNA-processing protein EBP2-like protein [Arabidopsis thaliana] gi|21362538|sp|Q9LUJ5.1|EBP2_ARATH RecName: Full=Probable rRNA-processing protein EBP2 homolog gi|9279684|dbj|BAB01241.1| nucleolar protein-like [Arabidopsis thaliana] gi|16604529|gb|AAL24270.1| AT3g22660/MWI23_3 [Arabidopsis thaliana] gi|24111281|gb|AAN46764.1| At3g22660/MWI23_3 [Arabidopsis thaliana] gi|332643141|gb|AEE76662.1| putative rRNA-processing protein EBP2-like protein [Arabidopsis thaliana]

 Score =  341 bits (875), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 185/291 (63%), Positives = 224/291 (76%), Gaps = 10/291 (3%)

Query: 12  DEDGFEDEDVSELNEEVSESESDSEGEEDVKLAEPSKQAVYNRDGLEEKLQDISWLENAG 71
           DE    DED +  +E  S S+SD+E E   KLAEP+K A+YNRDGL +KLQDISW E+  
Sbjct: 11  DEMNMIDEDDATDSEAESLSDSDTENEITEKLAEPTKTAIYNRDGLLDKLQDISWPEDVD 70

Query: 72  WIHKLTIDIDQEQEVDVNDDLKREASFYTQALEGTRQAFEKLQSMGLPFLRPADYYAEMV 131
           W HKLT++IDQ   VDVNDDL RE +FYTQALEGTR+AF KL  MG+ FLRPA+YYAEMV
Sbjct: 71  WTHKLTVEIDQGGAVDVNDDLARETAFYTQALEGTREAFGKLNEMGVNFLRPANYYAEMV 130

Query: 132 KSDAHMEKVKRRLLSEQKEIEEAAERKKAREAKKLAKEIQVQKTKERAKQKKEEIESVKK 191
           KSD HMEKVK RLL E+K+IEE+ ER+KAR+ K++AKE+Q QK KERAK+KK+ IESVKK
Sbjct: 131 KSDVHMEKVKSRLLHEKKQIEESEERRKARDNKRMAKEVQSQKMKERAKEKKDNIESVKK 190

Query: 192 WRKQRQQSGFAGEVDKGELDLAFEGGKSFER-SNKKRPGVSPGDRSGGKARKSGGGDSGK 250
           WRKQRQQSGF+ +   GE +L FE GKSF+R   KKRPGVSPGDRSGGK R +    S  
Sbjct: 191 WRKQRQQSGFSDKA--GEPELDFESGKSFQRGGGKKRPGVSPGDRSGGKGRPT----SRM 244

Query: 251 GKKKKNRDFRNSKFGFGGKKSMKKQNTSDTTDDLR-GFSKGDGAGNKRRKR 300
           G KK  R+FR+SKFG GG+K + KQNT++TT+D + GF  G  +GNKR+KR
Sbjct: 245 GNKK--REFRDSKFGHGGRKGLSKQNTAETTNDFKGGFRGGKASGNKRQKR 293

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	300
TAIR|locus:2094384	293	AT3G22660 [Arabidopsis thalian	0.836	0.856	0.532	1.1e-62
CGD|CAL0002033	426	orf19.4492 [Candida albicans (	0.58	0.408	0.324	5.7e-22
UNIPROTKB|Q59TD8	426	EBP2 "Likely EBNA-like pre-rRN	0.58	0.408	0.324	5.7e-22
UNIPROTKB|G4MRW1	446	MGG_02453 "rRNA processing pro	0.463	0.311	0.377	4.6e-20
ASPGD|ASPL0000058158	376	AN0074 [Emericella nidulans (t	0.563	0.449	0.356	2.1e-19
POMBASE|SPAC17H9.05	333	ebp2 "rRNA processing protein	0.613	0.552	0.316	2.2e-18
SGD|S000001655	427	EBP2 "Required for 25S rRNA ma	0.586	0.412	0.291	1.4e-17
WB|WBGene00015941	340	C18A3.3 [Caenorhabditis elegan	0.493	0.435	0.329	3e-17
UNIPROTKB|Q09958	340	C18A3.3 "Probable rRNA-process	0.493	0.435	0.329	3e-17
ZFIN|ZDB-GENE-030131-6989	308	ebna1bp2 "EBNA1 binding protei	0.596	0.581	0.273	1.8e-16

TAIR|locus:2094384 AT3G22660 [Arabidopsis thaliana (taxid:3702)]

 Score = 640 (230.4 bits), Expect = 1.1e-62, P = 1.1e-62
 Identities = 139/261 (53%), Positives = 163/261 (62%)

Query:    42 KLAEPSKQAVYNRDGLEEKLQDISWLENAGWIHKLTIDIDQEQEVDVNDDLKREASFYTQ 101
             KLAEP+K A+YNRDGL +KLQDISW E+  W HKLT++IDQ   VDVNDDL RE +FYTQ
Sbjct:    41 KLAEPTKTAIYNRDGLLDKLQDISWPEDVDWTHKLTVEIDQGGAVDVNDDLARETAFYTQ 100

Query:   102 ALEGTRQAFEKLQSMGLPFLRPADYYAEMVKSDAHMEKVKRRLLSEQXXXXXXXXXXXXX 161
             ALEGTR+AF KL  MG+ FLRPA+YYAEMVKSD HMEKVK RLL E+             
Sbjct:   101 ALEGTREAFGKLNEMGVNFLRPANYYAEMVKSDVHMEKVKSRLLHEKKQIEESEERRKAR 160

Query:   162 XXXXXXXXXQVQKTKERAKQKKEEIESVKKWRKQRQQSGFAGEVDKGELDLAFEGGKSFE 221
                      Q QK KERAK+KK+ IESVKKWRKQRQQSGF+ +  + ELD  FE GKSF+
Sbjct:   161 DNKRMAKEVQSQKMKERAKEKKDNIESVKKWRKQRQQSGFSDKAGEPELD--FESGKSFQ 218

Query:   222 RSN-KKRPGVSPXXXXXXXXXXXXXXXXXXXXXXXXXXFRNXXXXXXXXXXXXXQNTSDT 280
             R   KKRPGVSP                          FR+             QNT++T
Sbjct:   219 RGGGKKRPGVSPGDRSGGKGRPTSRMGNKKRE------FRDSKFGHGGRKGLSKQNTAET 272

Query:   281 TDDLRG-FSKGDGAGNKRRKR 300
             T+D +G F  G  +GNKR+KR
Sbjct:   273 TNDFKGGFRGGKASGNKRQKR 293

GO:0005634 "nucleus" evidence=ISM

GO:0001510 "RNA methylation" evidence=RCA

GO:0006606 "protein import into nucleus" evidence=RCA

GO:0006626 "protein targeting to mitochondrion" evidence=RCA

CGD|CAL0002033 orf19.4492 [Candida albicans (taxid:5476)]

 Score = 242 (90.2 bits), Expect = 5.7e-22, Sum P(2) = 5.7e-22
 Identities = 58/179 (32%), Positives = 94/179 (52%)

Query:    47 SKQAVYNRDGLEEKLQ--DISWLENAGWIHKLTIDIDQ-EQEV-DVNDDLKREASFYTQA 102
             +K  + N   L E L   ++ W +++   H+     D+ E E+ D+ DD +RE +FY Q 
Sbjct:   176 TKLTINNMAALRESLARIELPWSKHSFIEHQSITSADKTESEIKDIYDDTERELAFYKQG 235

Query:   103 LEGTRQAFEKLQSMGLPFLRPADYYAEMVKSDAHMEKVKRRLLSEQXXXXXXXXXXXXXX 162
             L+  +Q+ + L  + +PF RP DY+AEMVKSD HM+K+K +LL+E               
Sbjct:   236 LDAVKQSRKTLLKLKIPFSRPMDYFAEMVKSDEHMDKLKNKLLTEAANKKASEEAKRQRQ 295

Query:   163 XXXXXXXXQVQKTKERAKQKKEEIESVKKWRKQRQQSGFAGEVD-KGELDLAFEGGKSF 220
                     Q    +ERAKQKKE +E +K  +K+R  +  + + D +  L+ A E  + +
Sbjct:   296 LKKFGKQVQHATLQERAKQKKETLEKIKSLKKKRGANEISNDDDFQIALEEATENNQKY 354

GO:0003674 "molecular_function" evidence=ND

GO:0000280 "nuclear division" evidence=IEA

GO:0006364 "rRNA processing" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

GO:0034399 "nuclear periphery" evidence=IEA

GO:0005816 "spindle pole body" evidence=IEA

GO:0030687 "preribosome, large subunit precursor" evidence=IEA

UNIPROTKB|Q59TD8 EBP2 "Likely EBNA-like pre-rRNA processing factor EBP2p" [Candida albicans SC5314 (taxid:237561)]

 Score = 242 (90.2 bits), Expect = 5.7e-22, Sum P(2) = 5.7e-22
 Identities = 58/179 (32%), Positives = 94/179 (52%)

Query:    47 SKQAVYNRDGLEEKLQ--DISWLENAGWIHKLTIDIDQ-EQEV-DVNDDLKREASFYTQA 102
             +K  + N   L E L   ++ W +++   H+     D+ E E+ D+ DD +RE +FY Q 
Sbjct:   176 TKLTINNMAALRESLARIELPWSKHSFIEHQSITSADKTESEIKDIYDDTERELAFYKQG 235

Query:   103 LEGTRQAFEKLQSMGLPFLRPADYYAEMVKSDAHMEKVKRRLLSEQXXXXXXXXXXXXXX 162
             L+  +Q+ + L  + +PF RP DY+AEMVKSD HM+K+K +LL+E               
Sbjct:   236 LDAVKQSRKTLLKLKIPFSRPMDYFAEMVKSDEHMDKLKNKLLTEAANKKASEEAKRQRQ 295

Query:   163 XXXXXXXXQVQKTKERAKQKKEEIESVKKWRKQRQQSGFAGEVD-KGELDLAFEGGKSF 220
                     Q    +ERAKQKKE +E +K  +K+R  +  + + D +  L+ A E  + +
Sbjct:   296 LKKFGKQVQHATLQERAKQKKETLEKIKSLKKKRGANEISNDDDFQIALEEATENNQKY 354

GO:0003674 "molecular_function" evidence=ND

UNIPROTKB|G4MRW1 MGG_02453 "rRNA processing protein Ebp2" [Magnaporthe oryzae 70-15 (taxid:242507)]

 Score = 243 (90.6 bits), Expect = 4.6e-20, P = 4.6e-20
 Identities = 54/143 (37%), Positives = 81/143 (56%)

Query:    87 DVNDDLKREASFYTQALEGTRQAFEKLQSMGLPFLRPADYYAEMVKSDAHMEKVKRRLLS 146
             DV+DDL RE + Y Q+L+  ++A + L++ G+PF RP DY+AEMVK D HMEKVK +L+ 
Sbjct:   227 DVSDDLARELALYKQSLDAAKRARQLLRAEGVPFTRPGDYFAEMVKPDEHMEKVKAKLVE 286

Query:   147 EQXXXXXXXXXXXXXXXXXXXXXXQVQKTKERAKQKKEEIESVKKWRKQRQQSGFAGEVD 206
             +                       QV K +ERAK KK+ +E +K  +++RQ+ G +  + 
Sbjct:   287 DATAKKAAAEARKLRDLKKFGKQVQVAKLQERAKAKKDTLEKIKDLKRKRQEGG-SSALG 345

Query:   207 KGELDLAFEGGKSFERSNKKRPG 229
             + E D+ F+ G   E   KK  G
Sbjct:   346 EREADI-FDVG--VENELKKPSG 365

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

ASPGD|ASPL0000058158 AN0074 [Emericella nidulans (taxid:162425)]

 Score = 234 (87.4 bits), Expect = 2.1e-19, P = 2.1e-19
 Identities = 62/174 (35%), Positives = 85/174 (48%)

Query:    59 EKLQDISWLENAGWIHKLTIDIDQEQEV-DVNDDLKREASFYTQALEGTRQAFEKLQSMG 117
             +++  IS L      + L    + E ++ D NDDL RE SFY  A      A + L+  G
Sbjct:   139 KRISFISHLTPFSEHNSLISKAEDEMDIPDANDDLNRELSFYKTAQTAAYTARKLLKKEG 198

Query:   118 LPFLRPADYYAEMVKSDAHMEKVKRRLLSEQXXXXXXXXXXXXXXXXXXXXXXQVQKTKE 177
             +PF RP DY+AEMVKSD HM K+K++L  E                       QV K ++
Sbjct:   199 VPFTRPGDYFAEMVKSDEHMGKIKKKLYDEAASKKAAAEARKQRDLKKFGKQVQVAKLQQ 258

Query:   178 RAKQKKEEIESVKKWRKQRQQ--SGFAGEVDKGELDLAFEGGKSFERSNKKRPG 229
             RAK+KKE IE +   +K+R+   SG  G  D    D+A E   S E   K+  G
Sbjct:   259 RAKEKKEAIERINDLKKKRKNDTSGQDGGADD-LFDVAVEDAVS-ENPRKRARG 310

GO:0044732 "mitotic spindle pole body" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

GO:0034399 "nuclear periphery" evidence=IEA

GO:0030687 "preribosome, large subunit precursor" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

GO:0000280 "nuclear division" evidence=IEA

GO:0006364 "rRNA processing" evidence=IEA

POMBASE|SPAC17H9.05 ebp2 "rRNA processing protein Ebp2 (predicted)" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 222 (83.2 bits), Expect = 2.2e-18, P = 2.2e-18
 Identities = 63/199 (31%), Positives = 96/199 (48%)

Query:    43 LAEPSKQAVYNRDGLE---EKLQ---DISWLENAGWIHKLTIDIDQEQEVDVNDDLKREA 96
             L    K A+ N   LE   E+++   DIS++EN     K  I I+     +V DDL RE 
Sbjct:    86 LIRKRKLAINNTVALENIYERIKYPDDISFVENQAVTTKEPIIIE-----NVEDDLAREL 140

Query:    97 SFYTQALEGTRQAFEKLQSMGLPFLRPADYYAEMVKSDAHMEKVKRRLLSEQXXXXXXXX 156
             +FY Q +   + AF KL+   +   RP DY+AEM+KSD HMEKV++ L+ E         
Sbjct:   141 AFYKQGVSSVKAAFAKLREANVLISRPHDYFAEMLKSDDHMEKVRQELIKEATAKKLSQQ 200

Query:   157 XXXXXXXXXXXXXXQVQKTKERAKQKKEEIESVKKWRKQRQQSGFAGEVDKGELDLAFEG 216
                           Q+ K +ER ++KKE +E +   +++        E D  ++ L+   
Sbjct:   201 AKKQRELKKFGKQVQLAKQEERQREKKETLEKINLLKRKHTGGDLTTE-DDFDIALSSAS 259

Query:   217 GKSFE---RSNKKRPGVSP 232
               +F+   RS K RP  +P
Sbjct:   260 ADTFKKGSRSTKSRPQPNP 278

GO:0005515 "protein binding" evidence=IPI

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=ISO;IDA

GO:0005816 "spindle pole body" evidence=IPI

GO:0006364 "rRNA processing" evidence=ISO

GO:0044732 "mitotic spindle pole body" evidence=IDA

SGD|S000001655 EBP2 "Required for 25S rRNA maturation and 60S ribosomal subunit assembly" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 220 (82.5 bits), Expect = 1.4e-17, P = 1.4e-17
 Identities = 55/189 (29%), Positives = 98/189 (51%)

Query:    48 KQAVYNRDGLEEKLQDIS--WLENAGWIHK-LTIDIDQEQEV-DVNDDLKREASFYTQAL 103
             K  V N   ++  L+ +   W +++   H+ +T + + ++ + D+ DD +RE +FY Q+L
Sbjct:   192 KLTVNNTKAMKHALERVQLPWKKHSFQEHQSVTSETNTDEHIKDIYDDTERELAFYKQSL 251

Query:   104 EGTRQAFEKLQSMGLPFLRPADYYAEMVKSDAHMEKVKRRLLSEQXXXXXXXXXXXXXXX 163
             +    A ++L+ + +PF RP DY+AEMVKSD HM+K+K +L+ E                
Sbjct:   252 DAVLVARDELKRLKVPFKRPLDYFAEMVKSDEHMDKIKGKLIEEASDKKAREEARRQRQL 311

Query:   164 XXXXXXXQVQKTKERAKQKKEEIESVKKWRKQRQQSGFAGEVDKGELDLAFEG---GKSF 220
                    Q    ++R  +K+E +E +K  + +R+ +    E+D  E ++  E    GK F
Sbjct:   312 KKFGKQVQNATLQKRQLEKRETLEKIKSLKNKRKHN----EIDHSEFNVGVEEEVEGKRF 367

Query:   221 ERS--NKKR 227
             +R   N KR
Sbjct:   368 DRGRPNGKR 376

GO:0005634 "nucleus" evidence=IEA

GO:0042254 "ribosome biogenesis" evidence=IEA

GO:0006364 "rRNA processing" evidence=IMP

GO:0005730 "nucleolus" evidence=IEA;IDA

GO:0000280 "nuclear division" evidence=IMP

GO:0003674 "molecular_function" evidence=ND

GO:0030687 "preribosome, large subunit precursor" evidence=IDA

GO:0034399 "nuclear periphery" evidence=IDA

WB|WBGene00015941 C18A3.3 [Caenorhabditis elegans (taxid:6239)]

 Score = 213 (80.0 bits), Expect = 3.0e-17, P = 3.0e-17
 Identities = 51/155 (32%), Positives = 82/155 (52%)

Query:    48 KQAVYNRDG-LEEKLQDISWLENAGWIHKLTIDIDQEQEVDV---NDDLKREASFYTQAL 103
             K+ + N+   ++EKL +I+  ++  W+  L + +    E+D    NDD +RE +FY QA 
Sbjct:    82 KRPIINKSAEMKEKLAEIT--KDLPWVETLEV-VTPHSEMDKKVENDDFQRELNFYKQAE 138

Query:   104 EGTRQAFEKLQSMGLPFLRPADYYAEMVKSDAHMEKVKRRLLSEQXXXXXXXXXXXXXXX 163
             +  + A+ +L ++G+  LRP DYYAEM KSD HM+KV++RLL  Q               
Sbjct:   139 KAVQIAYPRLLNLGIKVLRPTDYYAEMAKSDTHMQKVRKRLLGIQEMKERQEAFRRIREE 198

Query:   164 XXXXXXXQVQKTKERAKQKKEEIESVKKWRKQRQQ 198
                    Q +    +  +KK   E+VKK +K  +Q
Sbjct:   199 KKFAVKVQKEVLAAKNTEKKNLAEAVKKHKKGMKQ 233

GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP

GO:0040007 "growth" evidence=IMP

GO:0002119 "nematode larval development" evidence=IMP

GO:0000003 "reproduction" evidence=IMP

GO:0040035 "hermaphrodite genitalia development" evidence=IMP

GO:0006898 "receptor-mediated endocytosis" evidence=IMP

UNIPROTKB|Q09958 C18A3.3 "Probable rRNA-processing protein EBP2 homolog" [Caenorhabditis elegans (taxid:6239)]

 Score = 213 (80.0 bits), Expect = 3.0e-17, P = 3.0e-17
 Identities = 51/155 (32%), Positives = 82/155 (52%)

Query:    48 KQAVYNRDG-LEEKLQDISWLENAGWIHKLTIDIDQEQEVDV---NDDLKREASFYTQAL 103
             K+ + N+   ++EKL +I+  ++  W+  L + +    E+D    NDD +RE +FY QA 
Sbjct:    82 KRPIINKSAEMKEKLAEIT--KDLPWVETLEV-VTPHSEMDKKVENDDFQRELNFYKQAE 138

Query:   104 EGTRQAFEKLQSMGLPFLRPADYYAEMVKSDAHMEKVKRRLLSEQXXXXXXXXXXXXXXX 163
             +  + A+ +L ++G+  LRP DYYAEM KSD HM+KV++RLL  Q               
Sbjct:   139 KAVQIAYPRLLNLGIKVLRPTDYYAEMAKSDTHMQKVRKRLLGIQEMKERQEAFRRIREE 198

Query:   164 XXXXXXXQVQKTKERAKQKKEEIESVKKWRKQRQQ 198
                    Q +    +  +KK   E+VKK +K  +Q
Sbjct:   199 KKFAVKVQKEVLAAKNTEKKNLAEAVKKHKKGMKQ 233

GO:0005515 "protein binding" evidence=IPI

ZFIN|ZDB-GENE-030131-6989 ebna1bp2 "EBNA1 binding protein 2" [Danio rerio (taxid:7955)]

 Score = 204 (76.9 bits), Expect = 1.8e-16, P = 1.8e-16
 Identities = 55/201 (27%), Positives = 96/201 (47%)

Query:    45 EPSKQAVYNRDGLEEKL----QDISWLENAGWIHKLTIDI-----------DQEQEVDVN 89
             +  K+ + N +GL + L    +++ W+E     +   ++I           +  +E++  
Sbjct:    44 DEQKKTINNVEGLNKCLAEFKKNLPWIERLDLTNPPAVNIIAKAEGRAQQPEGSKEINAE 103

Query:    90 DDLKREASFYTQALEGTRQAFEKLQSMGLPFLRPADYYAEMVKSDAHMEKVKRRLLSEQX 149
             DD +RE  FY QA      A  KLQ   +P  RP DY+AEM K+D HM+K++++LL +Q 
Sbjct:   104 DDFQREMYFYRQAQATVLAALPKLQKFKIPTKRPDDYFAEMAKTDQHMQKIRKKLLLKQE 163

Query:   150 XXXXXXXXXXXXXXXXXXXXXQVQKTKERAKQKKEEIESVKKWRKQRQQSGFAGEVD--K 207
                                  Q +  + R KQKK  + +VKK++K     G   ++D  +
Sbjct:   164 VMEKSEKAKRLREQRKYGKKVQTEVIQNRQKQKKAMLSAVKKYQK-----GMTDKLDFLE 218

Query:   208 GELDLAFEGGKSFERSNKKRP 228
             G+ +   +G  + ++ NKK P
Sbjct:   219 GDQNQGQKGSSTKKQINKKNP 239

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9LUJ5	EBP2_ARATH	No assigned EC number	0.6357	0.9366	0.9590	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	eugene3.00151094	hypothetical protein (300 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	estExt_fgenesh4_pg.C_LG_XV0629	hypothetical protein (314 aa)				•	•				0.672
	estExt_Genewise1_v1.C_LG_IV0024	SubName- Full=Putative uncharacterized protein; (604 aa)				•	•		•		0.629
	eugene3.00090493	hypothetical protein (840 aa)				•	•				0.627
	gw1.I.4832.1	hypothetical protein (422 aa)				•	•				0.623
	estExt_fgenesh4_pm.C_1070023	hypothetical protein (554 aa)				•			•		0.574
	gw1.86.17.1	hypothetical protein (573 aa)				•	•		•		0.570
	eugene3.00110946	hypothetical protein (317 aa)				•	•		•		0.566
	estExt_Genewise1_v1.C_LG_VII2715	hypothetical protein (380 aa)				•			•		0.565
	eugene3.01070082	hypothetical protein (318 aa)				•	•		•		0.548
	grail3.0101007501	hypothetical protein (229 aa)				•					0.544

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	300
pfam05890	270	pfam05890, Ebp2, Eukaryotic rRNA processing protei	6e-67

>gnl|CDD|218797 pfam05890, Ebp2, Eukaryotic rRNA processing protein EBP2

 Score =  209 bits (535), Expect = 6e-67
 Identities = 96/277 (34%), Positives = 150/277 (54%), Gaps = 26/277 (9%)

Query: 26  EEVSESESDSEGEEDVKLAEPSKQAVYNRDGLEEKLQDISWLENAGWIHKLTI---DIDQ 82
            E+ E+ +D E +  + +    K+ + N   L+ KL+ I       W+ +L +   +   
Sbjct: 5   VELQEAFADGELKPGLNVVPHQKKTINNTAALKAKLERIKL--PLPWVERLDVTSPEPTD 62

Query: 83  EQEVDVNDDLKREASFYTQALEGTRQAFEKLQSMGLPFLRPADYYAEMVKSDAHMEKVKR 142
            Q  DV DD KRE +FY QAL    +A + L+ +G+PF RP DY+AEMVKSD HM+KV++
Sbjct: 63  LQIEDVEDDFKRELAFYKQALAAVLEARKLLKKLGVPFKRPDDYFAEMVKSDEHMQKVRK 122

Query: 143 RLLSEQKEIEEAAERKKAREAKKLAKEIQVQKTKERAKQKKEEIESVKKWRKQRQQSGFA 202
           +LL+E    + + E +K RE KK  K++QV+K +ERAK+KK+ +E +KK +K+R+  G  
Sbjct: 123 KLLAEAAAKKASEEARKQRELKKFGKQVQVEKLQERAKEKKDMLEKIKKLKKKRKGGGDE 182

Query: 203 GEVDKGELDLAFEGGKSFERSNKKRPGVSPGDRSGGKARKSGGGDSGKGKKKKNRDFRNS 262
           G+         F    + +               GG  +K   G + +GK    R  +++
Sbjct: 183 GD------LFDFLVDDAAK---------------GGSKKKGRKGGAARGKPNAKRKAKDA 221

Query: 263 KFGFGGKKSMKKQNTSDTTDDLRGFSKGDGAGNKRRK 299
           KFGFGGKK   K NT+++++DL GFS     G     
Sbjct: 222 KFGFGGKKRGSKSNTAESSNDLSGFSVKKMKGGGGAG 258

This family consists of several Eukaryotic rRNA processing protein EBP2 sequences. Ebp2p is required for the maturation of 25S rRNA and 60S subunit assembly. Ebp2p may be one of the target proteins of Rrs1p for executing the signal to regulate ribosome biogenesis. This family also plays a role in chromosome segregation. Length = 270

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	300
PF05890	271	Ebp2: Eukaryotic rRNA processing protein EBP2; Int	100.0
KOG3080	328	consensus Nucleolar protein-like/EBNA1-binding pro	100.0

>PF05890 Ebp2: Eukaryotic rRNA processing protein EBP2; InterPro: IPR008610 This family consists of several eukaryotic rRNA processing protein EBP2 sequences

Probab=100.00  E-value=1.4e-79  Score=572.83  Aligned_cols=225  Identities=46%  Similarity=0.796  Sum_probs=194.5

Q ss_pred             hcCCcccccCHHHHHHHHHccccccCCCcceeeecccCCCcc---CCCcchHHHHHHHHHHHHHHHHHHHHHHHhCCCCC
Q 039373           44 AEPSKQAVYNRDGLEEKLQDISWLENAGWIHKLTIDIDQEQE---VDVNDDLKREASFYTQALEGTRQAFEKLQSMGLPF  120 (300)
Q Consensus        44 a~~~k~~inN~~~L~~kL~~i~~~~~lpWiE~l~vt~~~~~~---vdv~DDl~RE~aFY~QAl~av~~a~~~L~~~gipf  120 (300)
                      +.+++++|||+++|+++|++|.|+.++||||||+||++.+..   +||+|||+||++||+|||+||++|+++|+++||||
T Consensus        24 ~~~~k~~inn~~~L~~kl~ei~~~~~~pWiE~L~vts~~~~~~~~~d~~dD~~RE~aFy~qAl~av~~a~~~L~~~gip~  103 (271)
T PF05890_consen   24 APEQKKAINNKEALKQKLKEIKLPKKLPWIETLDVTSPEPTDEQIKDVNDDLKRELAFYKQALEAVKEARPRLKKLGIPF  103 (271)
T ss_pred             cccccccccCHHHHHHHHHHhcccCCCCCeeEEeeecCccchhhhccccccHHHHHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence            678999999999999999999998899999999999876554   49999999999999999999999999999999999


Q ss_pred             CCCCcchhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 039373          121 LRPADYYAEMVKSDAHMEKVKRRLLSEQKEIEEAAERKKAREAKKLAKEIQVQKTKERAKQKKEEIESVKKWRKQRQQSG  200 (300)
Q Consensus       121 ~RP~DYfAEMvKSD~HM~KVr~kLl~eq~~ie~~E~~rk~Re~KKfgKqVQ~ek~~eR~keKk~~le~Ik~~kK~R~~~G  200 (300)
                      +||+||||||||||+||++||++||.++++|+++|++|++|++||||||||++++++|++||+++|++|++|||+|+..+
T Consensus       104 ~RP~DYfAEMvKSD~HM~KVr~kLl~~~~~ie~~E~~rk~Re~KKfgKqvQ~ek~~eR~keKk~~le~Ik~~kK~~~~~~  183 (271)
T PF05890_consen  104 KRPDDYFAEMVKSDEHMEKVRQKLLKEQKRIEASEEARKQRELKKFGKQVQVEKLQERAKEKKEMLEKIKKWKKKRKEGN  183 (271)
T ss_pred             cCCCcchHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999886211


Q ss_pred             CCCCCCcccccccccCCccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcchhhhcccCCCCCCCCCCCCCchhh
Q 039373          201 FAGEVDKGELDLAFEGGKSFERSNKKRPGVSPGDRSGGKARKSGGGDSGKGKKKKNRDFRNSKFGFGGKKSMKKQNTSDT  280 (300)
Q Consensus       201 ~~~~~~~~~fdl~~~~~~~~~~~~~kr~~~~~g~r~gg~~~~~~~g~~~~~~~~~KR~~Kd~KfGFGGkKr~~K~Nta~S  280 (300)
                            +++||+.+++..  ....        +.+. +      .+..+.++++.+|++||+||||||+||++|+||++|
T Consensus       184 ------~~~~d~~~~~~~--~~~~--------~~k~-~------~~~~~~~~~~~kR~~kd~KfGfGGkKr~~K~Nt~~S  240 (271)
T PF05890_consen  184 ------EDEFDFLDDDAK--NKKS--------KKKG-G------KGKKGRGKKNKKRKAKDAKFGFGGKKRGSKRNTAES  240 (271)
T ss_pred             ------ccchhhhhcccc--cccc--------cccc-c------cccccccccccchhhhccccCCCCCCCCCCCCcccc
Confidence                  123555554431  1110        0000 0      011122357899999999999999999999999999


Q ss_pred             ccCCCCCCCCC
Q 039373          281 TDDLRGFSKGD  291 (300)
Q Consensus       281 s~D~sgf~~~~  291 (300)
                      ++||+||+.++
T Consensus       241 ~~d~~~f~~~~  251 (271)
T PF05890_consen  241 SNDFSGFSSKR  251 (271)
T ss_pred             cccccccCcCC
Confidence            99999999654

Ebp2p is required for the maturation of 25S rRNA and 60S subunit assembly. Ebp2p may be one of the target proteins of Rrs1p for executing the signal to regulate ribosome biogenesis [].

>KOG3080 consensus Nucleolar protein-like/EBNA1-binding protein [RNA processing and modification]

Probab=100.00  E-value=2.3e-73  Score=532.78  Aligned_cols=253  Identities=39%  Similarity=0.669  Sum_probs=208.6

Q ss_pred             CCCCchhhhcccccccCcCCCccchhhhhhh--------------cCCcccccCHHHHHHHHHccccccCCCcceeeecc
Q 039373           14 DGFEDEDVSELNEEVSESESDSEGEEDVKLA--------------EPSKQAVYNRDGLEEKLQDISWLENAGWIHKLTID   79 (300)
Q Consensus        14 ~~~~d~e~~~~~~~~~~~~~~~~~d~el~~a--------------~~~k~~inN~~~L~~kL~~i~~~~~lpWiE~l~vt   79 (300)
                      +.|++.+|++.+++++.++ .+.+|.|++.+              ++.+..||+..+|+++|.+|.  ..+||+|+|+++
T Consensus        36 ~alee~~m~~~D~~~~~d~-~d~~d~E~e~a~~r~~Lk~~~ni~~e~~~d~in~~~~l~~kl~~ik--~~lew~E~ld~~  112 (328)
T KOG3080|consen   36 EALEEKEMSNTDEEEIIDD-GDTTDRELESAFDRGDLKDGLNIELEGDKDAINKRDGLLDKLVAIK--NDLEWVERLDVI  112 (328)
T ss_pred             hhhcccccccccccccccc-ccchhHHHHHhhccccccccccccccCccchhhhhHHHHHHHHHHH--hccccccchhhh
Confidence            4555555553222222222 33566666643              578999999999999999996  689999999998


Q ss_pred             cCC---------CccCC---CcchHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCcchhhccCChHHHHHHHHHHHHH
Q 039373           80 IDQ---------EQEVD---VNDDLKREASFYTQALEGTRQAFEKLQSMGLPFLRPADYYAEMVKSDAHMEKVKRRLLSE  147 (300)
Q Consensus        80 ~~~---------~~~vd---v~DDl~RE~aFY~QAl~av~~a~~~L~~~gipf~RP~DYfAEMvKSD~HM~KVr~kLl~e  147 (300)
                      +.-         ...|.   |+|||+|||+||+|||.||++|+++|+.|||||.||+||||||||||+||+|||++||.+
T Consensus       113 ~~~~~l~~ei~~~~~v~~~~~eDDf~RElaFYkQa~~aVl~A~~rL~elgV~~~RP~DYfAEMaKSD~HMqKVr~~Li~e  192 (328)
T KOG3080|consen  113 SFVEPLTVEIDTDEAVIPNNPEDDFARELAFYKQALSAVLEAFPRLHELGVPFLRPTDYFAEMAKSDEHMQKVRQRLIKE  192 (328)
T ss_pred             hccCccccccccCcccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccCchHHHHHHhhhHHHHHHHHHHHHHH
Confidence            421         11233   449999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCcccccccccCCccccccCCCC
Q 039373          148 QKEIEEAAERKKAREAKKLAKEIQVQKTKERAKQKKEEIESVKKWRKQRQQSGFAGEVDKGELDLAFEGGKSFERSNKKR  227 (300)
Q Consensus       148 q~~ie~~E~~rk~Re~KKfgKqVQ~ek~~eR~keKk~~le~Ik~~kK~R~~~G~~~~~~~~~fdl~~~~~~~~~~~~~kr  227 (300)
                      |++++++|++|++|++||||||||.+++++|+.||++||++||+|||+|+    .+       +|||+.+.         
T Consensus       193 q~~ke~sE~ark~RelKKfgKqVQ~~~l~~Rq~EKk~~lekiKk~kk~~~----~~-------~lDf~e~~---------  252 (328)
T KOG3080|consen  193 QTAKERSEEARKQRELKKFGKQVQKAKLQERQREKKETLEKIKKLKKGRT----ED-------ELDFLEGN---------  252 (328)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc----cc-------cchhhhcC---------
Confidence            99999999999999999999999999999999999999999999999653    12       67777652         


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCcchhhhcccCCCCCCCCCCCCCchhhccCCCCCCCCCCCCc
Q 039373          228 PGVSPGDRSGGKARKSGGGDSGKGKKKKNRDFRNSKFGFGGKKSMKKQNTSDTTDDLRGFSKGDGAGN  295 (300)
Q Consensus       228 ~~~~~g~r~gg~~~~~~~g~~~~~~~~~KR~~Kd~KfGFGGkKr~~K~Nta~Ss~D~sgf~~~~~~g~  295 (300)
                      ++++++.+.|+++...+      +.+|.||++||+||||||+|+++|+||++|++||+||+.|++.||
T Consensus       253 ~~~a~~~k~G~rg~~~R------~~pn~KR~~Kn~KfGfGGkKk~sK~Nt~eS~ad~~g~~~g~~~~G  314 (328)
T KOG3080|consen  253 PAGADGDKKGGRGTKMR------KQPNPKRQKKNEKFGFGGKKKGSKRNTAESSADVSGGRRGGKNGG  314 (328)
T ss_pred             ccccccccccccccccc------CCCchhhhhhhcccCCCcccccccccchhhhhccccccccccccC
Confidence            13445666666544322      246899999999999999999999999999999999998887754

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	300
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.8 bits (97), Expect = 2e-04
 Identities = 21/107 (19%), Positives = 40/107 (37%), Gaps = 8/107 (7%)

Query: 55  DGLEEKLQDISWLENAGWIHKLTIDIDQEQEVDVNDDLKREASFYTQALEGTRQAFEKLQ 114
                   D  +LE     H  T        ++    LK    FY   +      +E+L 
Sbjct: 491 TLFRMVFLDFRFLEQK-IRHDSTAWNASGSILNTLQQLK----FYKPYICDNDPKYERLV 545

Query: 115 SMGLPFLRPADYYAEMVKSDAHMEKVKRRLLSEQKEIEEAAERKKAR 161
           +  L FL   +    ++ S  + + ++  L++E + I E A ++  R
Sbjct: 546 NAILDFLPKIE--ENLICSK-YTDLLRIALMAEDEAIFEEAHKQVQR 589

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00