Citrus Sinensis ID: 039401

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------17
Protein Sequence
KQPWFGSREAEGYLSLENICLLSLRKEDRGEETCQGEEGTSCFKEEEPTDSATLVQNYDCDKHYYDFHVIYNASYRVPVLYFRAYCSGGQPLVLDEIEKGLPSCSAKALSESKWTFITHEEHPYLNRPWYKLHPCGTSEWMKLLFLGDTTQKKNGVAIELYLVAWFSV
Secondary Structure (PSIPRED)
ccccccccccccEEEEEEEEEccccccccccccccccccccccccccccccccccccccccEEEEEEEEEEEccccccEEEEEEEccccccccHHHHHHccccHHHHHHcccccccccEEcccccccccEEEEccccHHHHHHHHcccccccccccccccEEEEcccc
Secondary Structure Prediction (SSPRO)
cccEEEcccccccHHHccEEEEEEEEcccccccccccccccccccccccccccEEccccccEEEEEEEEEEccccEccEEEEEEEccccccccHHHHHHHccHHHHHHHccccccEEEccccccccccEEEEccccHHHHHHHHHHHccccccccccHHHEEEEEHcc
Coil and Loop (DISEMBL)
kqpwfgsreaegylsLENICLLslrkedrgeetcqgeegtscfkeeeptdsatlvqnydcdkhyydfHVIYNASYRVPVLYFRAycsggqplvldeiekglpscsakalseskwtfitheehpylnrpwyklhpcgtsewMKLLFLGDTTQKKNGVAIELYLVAWFSV
Flexible Loop (DISEMBL)
kqpwfgsreaegylslENICLLSLrkedrgeetcqgeegtscfkeeeptdsATLVQNYDCDKHYYDFHVIYNASYRVPVLYFRAYCSGGQPLVLDEIEKGLPSCSAKALSESKWTFITHEEHPYLNRPWYKLHPCGTSEWMKLLFLGDTTQKKNGVAIELYLVAWFSV
Low Complexity Region (SEG)
KQPWFGSREAEGYLSLENICLLSLRKEDRGEETCQGEEGTSCFKEEEPTDSATLVQNYDCDKHYYDFHVIYNASYRVPVLYFRAYCSGGQPLVLDEIEKGLPSCSAKALSESKWTFITHEEHPYLNRPWYKLHPCGTSEWMKLLFLGDTTQKKNGVAIELYLVAWFSV
Disordered region (IsUnstruct)
****************************************************TLVQNYDCDKHYYDFHVIYNASYRVPVLYFRAYCSGGQPLVLDEIEKGLPSCSAKALSESKWTFITHEEHPYLNRPWYKLHPCGTSEWMKLLFLGDTTQKKNGVAIELYLVAWF**
Disordered Region (DISOPRED)
****FGS*EAEGYLSLENIC*******************TSCFK***************CDKHYYDFHVIYNASYRVPVLYFRAYCSGGQPLVLDEIEKGLPSCSA*****SKWTFITHEEHPYLNRPWYKLHPCGTSEWMKLLF**********VAIELYLVAWFSV
Disordered Region (DISEMBL)
********EAEGYLSLENICLLSLRKE***********************SATLVQNYDCDKHYYDFHVIYNASYRVPVLYFRAYCSGGQPLVLDEIEKGLPSCSAKALSESKWTFITHEEHPYLNRPWYKLHPCGTSEWMKLLFLGDTTQKKNGVAIELYLVAWFSV
Disordered Region (DISPRO)
*QPWFGSREAEGYLSLENICLLSLRKED**********************SATLVQNYDCDKHYYDFHVIYNASYRVPVLYFRAYCSGGQPLVLDEIEKGLPSCSAKALSESKWTFITHEEHPYLNRPWYKLHPCGTSEWMKLLFLGDTTQKKNGVAIELYLVAWFSV
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
KQPWFGSREAEGYLSLENICLLSLRKEDRGEETCQGEEGTSCFKEEEPTDSATLVQNYDCDKHYYDFHVIYNASYRVPVLYFRAYCSGGQPLVLDEIEKGLPSCSAKALSESKWTFITHEEHPYLNRPWYKLHPCGTSEWMKLLFLGDTTQKKNGVAIELYLVAWFSV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	168	2.2.26 [Sep-21-2011]
Q9H0Y0	220	Ubiquitin-like-conjugatin	yes	no	0.75	0.572	0.355	1e-17
Q8R1P4	215	Ubiquitin-like-conjugatin	yes	no	0.595	0.465	0.384	2e-16
Q55EL2	230	Ubiquitin-like-conjugatin	yes	no	0.619	0.452	0.376	2e-13
A7KAI2	339	Autophagy-related protein	N/A	no	0.476	0.235	0.306	1e-05
Q6FQJ2	309	Autophagy-related protein	yes	no	0.458	0.249	0.321	5e-05
O43035	275	Autophagy-related protein	yes	no	0.773	0.472	0.214	9e-05
A7TK16	318	Autophagy-related protein	N/A	no	0.476	0.251	0.292	0.0001
Q5ABQ7	333	Autophagy-related protein	N/A	no	0.5	0.252	0.288	0.0004
Q6CL19	302	Autophagy-related protein	yes	no	0.446	0.248	0.321	0.0006
Q6PFS7	317	Ubiquitin-like-conjugatin	no	no	0.553	0.293	0.269	0.0008

>sp|Q9H0Y0|ATG10_HUMAN Ubiquitin-like-conjugating enzyme ATG10 OS=Homo sapiens GN=ATG10 PE=1 SV=1

 Score = 89.0 bits (219), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 48/135 (35%), Positives = 73/135 (54%), Gaps = 9/135 (6%)

Query: 39  GTSCFKEEE----PTDSATLVQNYDCDKHY-YDFHVIYNASYRVPVLYFRAYCSGGQPLV 93
           G +C   EE    P D   +++     +   Y++HV+Y+ SY+VPVLYFRA    G+PL 
Sbjct: 65  GQTCLPMEEAFELPLDDCEVIETAAASEVIKYEYHVLYSCSYQVPVLYFRASFLDGRPLT 124

Query: 94  LDEIEKGLPSCSAKALSESKWTFITHEEHPYLNRPWYKLHPCGTSEWMKLLFLGDTTQKK 153
           L +I +G+  C    L +  W  IT +EHP L +P++ LHPC T+E+M  +        K
Sbjct: 125 LKDIWEGVHECYKMRLLQGPWDTITQQEHPILGQPFFVLHPCKTNEFMTPVLKNSQKINK 184

Query: 154 NGVAIELYLVAWFSV 168
           N      Y+ +W S+
Sbjct: 185 NVN----YITSWLSI 195

E2-like enzyme involved in autophagy. Acts as an E2-like enzyme that catalyzes the conjugation of ATG12 to ATG5. ATG12 conjugation to ATG5 is required for autophagy. Likely serves as an ATG5-recognition molecule. Not involved in ATG12 conjugation to ATG3.
Homo sapiens (taxid: 9606)
EC: 6EC: .EC: 3EC: .EC: 2EC: .EC: -

>sp|Q8R1P4|ATG10_MOUSE Ubiquitin-like-conjugating enzyme ATG10 OS=Mus musculus GN=Atg10 PE=1 SV=1

 Score = 85.1 bits (209), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 40/104 (38%), Positives = 63/104 (60%), Gaps = 4/104 (3%)

Query: 65  YDFHVIYNASYRVPVLYFRAYCSGGQPLVLDEIEKGLPSCSAKALSESKWTFITHEEHPY 124
           +++HV+Y+ SY+VPVLYFRA    G+PL L++I +G+  C    L +  W  IT +EHP 
Sbjct: 95  HEYHVLYSCSYQVPVLYFRASFLDGRPLALEDIWEGVHECYKPRLLQGPWDTITQQEHPI 154

Query: 125 LNRPWYKLHPCGTSEWMKLLFLGDTTQKKNGVAIELYLVAWFSV 168
           L +P++ LHPC T+E+M  +        +N      Y+ +W S+
Sbjct: 155 LGQPFFVLHPCKTNEFMTAVLKNSQKINRNVN----YITSWLSL 194

E2-like enzyme involved in autophagy. Acts as an E2-like enzyme that catalyzes the conjugation of ATG12 to ATG5. ATG12 conjugation to ATG5 is required for autophagy. Likely serves as an ATG5-recognition molecule. Not involved in ATG12 conjugation to ATG3.

Mus musculus (taxid: 10090)

EC: 6

EC: .

EC: 3

EC: .

EC: 2

EC: .

EC: -

>sp|Q55EL2|ATG10_DICDI Ubiquitin-like-conjugating enzyme ATG10 OS=Dictyostelium discoideum GN=atg10 PE=3 SV=1

 Score = 75.1 bits (183), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 41/109 (37%), Positives = 56/109 (51%), Gaps = 5/109 (4%)

Query: 65  YDFHVIYNASYRVPVLYFRAYCS-GGQPLVLDEIEKGLPSCSAKALSESKWTFITHEEHP 123
           + F +IY+ SY+VPVLY   + S    PL  +EI   LP  +     +S   +IT  EHP
Sbjct: 103 FQFDIIYSKSYQVPVLYLNGFSSFDSSPLSWNEIWNNLPLSNLDKNQQSTIPYITQVEHP 162

Query: 124 YLNRPWYKLHPCGTSEWMKLLFLGDTTQKKNGVAIE----LYLVAWFSV 168
            L  P Y+LHPC T   MKL+ L +     N    E     YL++W S+
Sbjct: 163 ILGNPCYQLHPCETDNLMKLILLKEKDYNDNNDKKEYFKDYYLLSWLSI 211

E2-like enzyme involved in autophagy. Acts as an E2-like enzyme that catalyzes the conjugation of atg12 to atg5. atg12 conjugation to atg5 is required for autophagy. Likely serves as an atg5-recognition molecule.

Dictyostelium discoideum (taxid: 44689)

EC: 6

EC: .

EC: 3

EC: .

EC: 2

EC: .

EC: -

>sp|A7KAI2|ATG3_PICAN Autophagy-related protein 3 OS=Pichia angusta GN=ATG3 PE=3 SV=1

 Score = 49.3 bits (116), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 8/88 (9%)

Query: 59  DCDKHYYDFHVIYNASYRVPVLYFRAYCSGGQPLVLDEIEKGLPSCSAKALSESKWTFIT 118
           D  K  YD ++ Y+ SYRVP +Y   + S G PL  +E+ + +        S+ +   +T
Sbjct: 181 DPKKRNYDLYITYSTSYRVPKMYLVGFNSNGVPLSPNEMFEDI-------ASDYRQKTVT 233

Query: 119 HEEHPYL-NRPWYKLHPCGTSEWMKLLF 145
            E+ P+L N     +HPC  +  M++L 
Sbjct: 234 IEKAPFLSNTTSVSIHPCRHANVMRVLM 261

Putative E2-like conjugating enzyme involved in autophagy and for the cytoplasm to vacuole transport (Cvt).

Pichia angusta (taxid: 870730)

>sp|Q6FQJ2|ATG3_CANGA Autophagy-related protein 3 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=ATG3 PE=3 SV=1

 Score = 47.4 bits (111), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 36/84 (42%), Gaps = 7/84 (8%)

Query: 63  HYYDFHVIYNASYRVPVLYFRAYCSGGQPLVLDEI-EKGLPSCSAKALSESKWTFITHEE 121
            YYD  + Y+ SYRVP +Y   +   G PL   E+ E   P    K  +  K  F     
Sbjct: 155 RYYDLFITYSTSYRVPKMYIVGFNGNGTPLTPKEMFEDITPDYRKKTATIEKLPFYKR-- 212

Query: 122 HPYLNRPWYKLHPCGTSEWMKLLF 145
               N P   +HPC  +  MK+L 
Sbjct: 213 ----NVPSVSIHPCKHANVMKVLL 232

Putative E2-like conjugating enzyme involved in autophagy and for the cytoplasm to vacuole transport (Cvt).

Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) (taxid: 284593)

>sp|O43035|ATG3_SCHPO Autophagy-related protein 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=atg3 PE=3 SV=1

 Score = 46.2 bits (108), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 30/140 (21%), Positives = 62/140 (44%), Gaps = 10/140 (7%)

Query: 29  RGEETCQGEEGTSCFKEEEPTDSATLVQNYDCDKHYYDFHVIYNASYRVPVLYFRAYCSG 88
           +G+     + G    K+EE  D        + +  YYD +++Y+  YR P L+ R + +G
Sbjct: 126 KGQSKELSDSGPLPLKDEEDDDQMVSPVIKEDEGRYYDLYIVYDKYYRTPRLFLRGWNAG 185

Query: 89  GQPLVLDEIEKGLPSCSAKALSESKWTFITHEEHPYL--NRPWYKLHPCGTSEWMKLLFL 146
           GQ L + +I + +         E     +T E  P+   +     +HPC  +  + L  +
Sbjct: 186 GQLLTMKDIYEDVS-------GEHAGKTVTMEPFPHYHSHNTMASVHPCKHASVL-LKLI 237

Query: 147 GDTTQKKNGVAIELYLVAWF 166
               ++ + + ++ Y+V + 
Sbjct: 238 KQHRERNDPIRVDQYMVLFL 257

Putative E2-like conjugating enzyme involved in autophagy and for the cytoplasm to vacuole transport (Cvt).

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|A7TK16|ATG3_VANPO Autophagy-related protein 3 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=ATG3 PE=3 SV=1

 Score = 45.8 bits (107), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 9/89 (10%)

Query: 59  DCDKHYYDFHVIYNASYRVPVLYFRAYCSGGQPLVLDEI-EKGLPSCSAKALSESKWTFI 117
           + D+ YYD ++ Y+ SY+VP +Y   +   G PL  +E+ E   P   +K  +  K  F 
Sbjct: 167 NTDRRYYDLYITYSTSYKVPKMYIVGFNGSGSPLTPEEMFEDIAPDYRSKTATIEKLPF- 225

Query: 118 THEEHPYLNR-PWYKLHPCGTSEWMKLLF 145
                 Y N      +HPC  +  M++L 
Sbjct: 226 ------YKNTISSVSIHPCKHANVMRILL 248

Putative E2-like conjugating enzyme involved in autophagy and for the cytoplasm to vacuole transport (Cvt).

Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) (taxid: 436907)

>sp|Q5ABQ7|ATG3_CANAL Autophagy-related protein 3 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=ATG3 PE=3 SV=1

 Score = 44.3 bits (103), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 6/90 (6%)

Query: 65  YDFHVIYNASYRVPVLYFRAYCSGGQPLVLDEIEKGLPSCSAKALSESKWTFITHEEHPY 124
           +D ++ Y+ SYRVP LY   + S G PL+  ++ + + S      +  +   + H     
Sbjct: 180 FDLYITYSTSYRVPKLYLVGFDSNGIPLLPQQMFEDINSDYKDKTATIENLPVAH----- 234

Query: 125 LNRPWYKLHPCGTSEWMKLLFLGDTTQKKN 154
            N     +HPC  S  MK+L       KKN
Sbjct: 235 -NTTSVSIHPCKHSSVMKVLMKHSKLNKKN 263

Putative E2-like conjugating enzyme involved in autophagy and for the cytoplasm to vacuole transport (Cvt).

Candida albicans (strain SC5314 / ATCC MYA-2876) (taxid: 237561)

>sp|Q6CL19|ATG3_KLULA Autophagy-related protein 3 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=ATG3 PE=3 SV=1

 Score = 43.5 bits (101), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 9/84 (10%)

Query: 64  YYDFHVIYNASYRVPVLYFRAYCSGGQPLVLDEIEKGLPSCSAKALSESKWTFITHEEHP 123
           +YD ++ Y+ SYRVP +Y   Y + G PL  D++       +A   S++     T E  P
Sbjct: 164 FYDLYITYSTSYRVPKMYLCGYDNDGTPLSPDQM---FEDIAADYRSKTA----TIEPLP 216

Query: 124 YL--NRPWYKLHPCGTSEWMKLLF 145
           +L  N     +HPC  +  MK+L 
Sbjct: 217 FLKGNNISVSIHPCKHANVMKVLM 240

Putative E2-like conjugating enzyme involved in autophagy and for the cytoplasm to vacuole transport (Cvt).

Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) (taxid: 284590)

>sp|Q6PFS7|ATG3_DANRE Ubiquitin-like-conjugating enzyme ATG3 OS=Danio rerio GN=atg3 PE=2 SV=1

 Score = 43.1 bits (100), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 11/104 (10%)

Query: 65  YDFHVIYNASYRVPVLYFRAYCSGGQPLVLDEIEKGLPSCSAKALSESKWTFITHEEHPY 124
           YD ++ Y+  Y+ P L+   Y    QPL +D++ + +     K         +T E HP 
Sbjct: 203 YDLYITYDKYYQTPRLWLFGYDEDRQPLTVDQMYEDISQDHVKKT-------VTIENHPN 255

Query: 125 LNRPWY-KLHPCGTSEWMKLLFLGDTTQKKNG-VAIELYLVAWF 166
           L  P    +HPC  +E MK +   +T  +  G + + +YL+ + 
Sbjct: 256 LPPPAMCSVHPCRHAEVMKKII--ETVAEGGGELGVHMYLLIFL 297

E2-like enzyme involved in autophagy and mitochondrial homeostasis. Catalyzes the conjugation of atg8-like proteins (gabarap, gabarapl1, gabarapl2 or map1lc3a) to phosphatidylethanolamine (PE). PE-conjugation to atg8-like proteins is essential for autophagy. Also acts as an autocatalytic E2-like enzyme, catalyzing the conjugation of atg12 to itself, atg12 conjugation to atg3 playing a role in mitochondrial homeostasis but not in autophagy.

Danio rerio (taxid: 7955)

EC: 6

EC: .

EC: 3

EC: .

EC: 2

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	168
224129340	234	predicted protein [Populus trichocarpa]	0.946	0.679	0.660	5e-56
255572706	233	transporter, putative [Ricinus communis]	1.0	0.721	0.619	3e-54
359494818	230	PREDICTED: ubiquitin-like-conjugating en	1.0	0.730	0.597	4e-53
255648152	240	unknown [Glycine max]	0.946	0.662	0.596	5e-50
356504464	240	PREDICTED: ubiquitin-like-conjugating en	0.946	0.662	0.596	5e-50
356520705	238	PREDICTED: ubiquitin-like-conjugating en	0.946	0.668	0.572	4e-46
297833544	225	autophagocytosis-associated family prote	0.952	0.711	0.570	7e-46
147856911	636	hypothetical protein VITISV_014603 [Viti	0.875	0.231	0.587	2e-45
30680332	225	autophagocytosis-associated family prote	0.952	0.711	0.561	4e-45
449463192	239	PREDICTED: ubiquitin-like-conjugating en	0.952	0.669	0.580	6e-45

>gi|224129340|ref|XP_002320561.1| predicted protein [Populus trichocarpa] gi|222861334|gb|EEE98876.1| predicted protein [Populus trichocarpa]

 Score =  222 bits (565), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 105/159 (66%), Positives = 125/159 (78%)

Query: 10  AEGYLSLENICLLSLRKEDRGEETCQGEEGTSCFKEEEPTDSATLVQNYDCDKHYYDFHV 69
            EGYLSLE++C+L   ++   E +C  EE     + E   DSATLVQ+   + HYYDFH+
Sbjct: 58  VEGYLSLESMCVLVSAEDSNEEVSCTVEEEAGFSEIEGAADSATLVQSNRHEAHYYDFHI 117

Query: 70  IYNASYRVPVLYFRAYCSGGQPLVLDEIEKGLPSCSAKALSESKWTFITHEEHPYLNRPW 129
           +Y+ASYRVPVLYFRAYCS G PL+L+EIEK LP+CS+K L E+KWTFIT EEHP+LNRPW
Sbjct: 118 VYSASYRVPVLYFRAYCSDGTPLLLNEIEKDLPACSSKVLLETKWTFITQEEHPFLNRPW 177

Query: 130 YKLHPCGTSEWMKLLFLGDTTQKKNGVAIELYLVAWFSV 168
           YKLHPCGTSEWMKLL LGD    KNG+AIELYLV+WFSV
Sbjct: 178 YKLHPCGTSEWMKLLCLGDEVAAKNGLAIELYLVSWFSV 216

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255572706|ref|XP_002527286.1| transporter, putative [Ricinus communis] gi|223533379|gb|EEF35130.1| transporter, putative [Ricinus communis]

 Score =  216 bits (549), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 104/168 (61%), Positives = 123/168 (73%)

Query: 1   KQPWFGSREAEGYLSLENICLLSLRKEDRGEETCQGEEGTSCFKEEEPTDSATLVQNYDC 60
           K+P+  S++ EG+LSLE +CL  L       +  + EE     KEE   D ATLV +   
Sbjct: 44  KRPYVASQQVEGFLSLEKMCLPVLENYYDNSDCTREEEVNFSGKEEAIDDDATLVYSSHH 103

Query: 61  DKHYYDFHVIYNASYRVPVLYFRAYCSGGQPLVLDEIEKGLPSCSAKALSESKWTFITHE 120
             HYYDFH++Y+ SYRVPVLYFR YCS G+PL L+EIEK LP+CSAK L ESKWTFIT E
Sbjct: 104 QVHYYDFHIVYSNSYRVPVLYFRGYCSDGRPLQLNEIEKDLPTCSAKVLLESKWTFITQE 163

Query: 121 EHPYLNRPWYKLHPCGTSEWMKLLFLGDTTQKKNGVAIELYLVAWFSV 168
           EHPYLNRPW+KLHPCGTSEWM+LLFLGD    +  VAIELYLV+WFSV
Sbjct: 164 EHPYLNRPWHKLHPCGTSEWMRLLFLGDAVSAEKRVAIELYLVSWFSV 211

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359494818|ref|XP_002270982.2| PREDICTED: ubiquitin-like-conjugating enzyme ATG10-like [Vitis vinifera] gi|302144207|emb|CBI23334.3| unnamed protein product [Vitis vinifera]

 Score =  212 bits (540), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 101/169 (59%), Positives = 126/169 (74%), Gaps = 1/169 (0%)

Query: 1   KQPWFGSREAEGYLSLENICLLSLRKEDRGEETCQGEEGTSCFKEEEPTDSATLVQNYDC 60
           K PW  S E EGYLSLEN+C+L   +ED  E++ +G E  +C  ++E  D+ATLVQ+Y  
Sbjct: 43  KSPWLTSHEVEGYLSLENMCILRSCEEDHDEKSHKGNEEPNCPGKDEYIDNATLVQSYSH 102

Query: 61  DKHYYDFHVIYNASYRVPVLYFRAYCSGGQPLVLDEIEKGLPSCSAKALSESKWTFITHE 120
           D  Y+DFH++++ASYRVPVLYFR + S GQPL+L+++EK LP  S   L ESKWTFIT E
Sbjct: 103 DVRYFDFHIVHSASYRVPVLYFRTFSSDGQPLLLEDVEKELPGNSTNVLMESKWTFITQE 162

Query: 121 EHPYLNRPWYKLHPCGTSEWMKLLFLGDTT-QKKNGVAIELYLVAWFSV 168
           EHPYLNRPWYKLHPCGTSEWMKLLFL D +     GV +ELYL +W S+
Sbjct: 163 EHPYLNRPWYKLHPCGTSEWMKLLFLTDPSLGGSQGVPVELYLSSWISM 211

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255648152|gb|ACU24530.1| unknown [Glycine max]

 Score =  202 bits (513), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 99/166 (59%), Positives = 121/166 (72%), Gaps = 7/166 (4%)

Query: 6   GSREAEGYLSLENICLLSLRKEDRGEETCQGEEGTSCFKEEEPTDSATLVQNYDCDKH-- 63
            S + EGYLSLEN+C +   +E   + +   +E ++  + EEP D ATLV    C +H  
Sbjct: 57  ASHKVEGYLSLENMCHIKSSQEQESDRSLTWKEESNISQREEPFDKATLV----CPEHEV 112

Query: 64  -YYDFHVIYNASYRVPVLYFRAYCSGGQPLVLDEIEKGLPSCSAKALSESKWTFITHEEH 122
            +YDFH++Y+ASYRVPVLYFR+Y S GQ L  +EIEK LP  SAK  SESKWTFITHEEH
Sbjct: 113 NHYDFHIVYSASYRVPVLYFRSYRSDGQLLPFNEIEKDLPGHSAKLRSESKWTFITHEEH 172

Query: 123 PYLNRPWYKLHPCGTSEWMKLLFLGDTTQKKNGVAIELYLVAWFSV 168
           PYLNRPWYKLHPCGTS+WMKLLF  D++  KNG  IE YL++WFSV
Sbjct: 173 PYLNRPWYKLHPCGTSDWMKLLFHSDSSLNKNGFVIEQYLISWFSV 218

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356504464|ref|XP_003521016.1| PREDICTED: ubiquitin-like-conjugating enzyme ATG10-like [Glycine max]

 Score =  202 bits (513), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 99/166 (59%), Positives = 121/166 (72%), Gaps = 7/166 (4%)

Query: 6   GSREAEGYLSLENICLLSLRKEDRGEETCQGEEGTSCFKEEEPTDSATLVQNYDCDKH-- 63
            S + EGYLSLEN+C +   +E   + +   +E ++  + EEP D ATLV    C +H  
Sbjct: 57  ASHKVEGYLSLENMCHIKSSQEQESDRSLTWKEESNISQREEPFDKATLV----CPEHEV 112

Query: 64  -YYDFHVIYNASYRVPVLYFRAYCSGGQPLVLDEIEKGLPSCSAKALSESKWTFITHEEH 122
            +YDFH++Y+ASYRVPVLYFR+Y S GQ L  +EIEK LP  SAK  SESKWTFITHEEH
Sbjct: 113 NHYDFHIVYSASYRVPVLYFRSYRSDGQLLPFNEIEKDLPGHSAKLRSESKWTFITHEEH 172

Query: 123 PYLNRPWYKLHPCGTSEWMKLLFLGDTTQKKNGVAIELYLVAWFSV 168
           PYLNRPWYKLHPCGTS+WMKLLF  D++  KNG  IE YL++WFSV
Sbjct: 173 PYLNRPWYKLHPCGTSDWMKLLFHSDSSLNKNGFVIEQYLISWFSV 218

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356520705|ref|XP_003529001.1| PREDICTED: ubiquitin-like-conjugating enzyme ATG10-like [Glycine max]

 Score =  189 bits (479), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 95/166 (57%), Positives = 118/166 (71%), Gaps = 7/166 (4%)

Query: 6   GSREAEGYLSLENICLLSLRKEDRGEETCQGEEGTSCFKEEEPTDSATLVQNYDCDKH-- 63
            S + EGYLSLEN+C +   +E+  + +   +E ++  + EEP D+A LV    C +H  
Sbjct: 55  ASHKVEGYLSLENMCHIKSSEEEESDRSLTWKEESNISQREEPFDNAALV----CPEHEV 110

Query: 64  -YYDFHVIYNASYRVPVLYFRAYCSGGQPLVLDEIEKGLPSCSAKALSESKWTFITHEEH 122
             YDFH++Y+A+YRVPVLYFR+Y   GQ L  DEIEK LP  SAK  SESKWTFI+HEEH
Sbjct: 111 NQYDFHIVYSATYRVPVLYFRSYHGDGQLLPFDEIEKDLPGHSAKLRSESKWTFISHEEH 170

Query: 123 PYLNRPWYKLHPCGTSEWMKLLFLGDTTQKKNGVAIELYLVAWFSV 168
           PYLNRPWYKLHPCGTS+WMKLLF GD++  K    IE YLV+WFS 
Sbjct: 171 PYLNRPWYKLHPCGTSDWMKLLFNGDSSLNKKDFVIEQYLVSWFSA 216

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297833544|ref|XP_002884654.1| autophagocytosis-associated family protein [Arabidopsis lyrata subsp. lyrata] gi|297330494|gb|EFH60913.1| autophagocytosis-associated family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  188 bits (477), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 93/163 (57%), Positives = 116/163 (71%), Gaps = 3/163 (1%)

Query: 6   GSREAEGYLSLENICLLSLRKEDRGEETCQGEEGTSCFKEEEPTDSATLVQNYDCDKHYY 65
            +++ EGYLSLE I +LS   E   +E+      T C ++EE  D   LV   + + HYY
Sbjct: 51  SNKQEEGYLSLEKIIILSSLDEIPEDESLNV--ATDCSEKEESIDHTILVPTLENEPHYY 108

Query: 66  DFHVIYNASYRVPVLYFRAYCSGGQPLVLDEIEKGLPSCSAKALSESKWTFITHEEHPYL 125
           DFH++Y+ASY+VPVLYFR YCSGGQPL LD I+K LPSCS   L ESKWTFIT EEHPYL
Sbjct: 109 DFHIVYSASYKVPVLYFRGYCSGGQPLALDVIKKDLPSCSVSLLLESKWTFITQEEHPYL 168

Query: 126 NRPWYKLHPCGTSEWMKLLFLGDTTQKKNGVAIELYLVAWFSV 168
           NRPW+KLHPCGT EW+KLL    ++   + + +ELYLV+WFSV
Sbjct: 169 NRPWFKLHPCGTEEWIKLLSQSSSSSGCH-MPVELYLVSWFSV 210

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147856911|emb|CAN80760.1| hypothetical protein VITISV_014603 [Vitis vinifera]

 Score =  187 bits (474), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 87/148 (58%), Positives = 111/148 (75%), Gaps = 1/148 (0%)

Query: 22  LSLRKEDRGEETCQGEEGTSCFKEEEPTDSATLVQNYDCDKHYYDFHVIYNASYRVPVLY 81
           L+  +ED  E++ +G E  +C  ++E  D+ATLVQ+Y  D  Y+DFH++++ASYRVPVLY
Sbjct: 470 LTSHEEDHDEKSHKGNEEPNCPGKDEYIDNATLVQSYSHDVRYFDFHIVHSASYRVPVLY 529

Query: 82  FRAYCSGGQPLVLDEIEKGLPSCSAKALSESKWTFITHEEHPYLNRPWYKLHPCGTSEWM 141
           FR + S GQPL+L+++EK LP  S   L ESKWTFIT EEHPYLNRPWYKLHPCGTSEWM
Sbjct: 530 FRTFSSDGQPLLLEDVEKELPGNSTNVLMESKWTFITQEEHPYLNRPWYKLHPCGTSEWM 589

Query: 142 KLLFLGDTT-QKKNGVAIELYLVAWFSV 168
           KLLFL D +     GV +ELYL +W S+
Sbjct: 590 KLLFLTDPSLGGSQGVPVELYLSSWISM 617

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30680332|ref|NP_850532.1| autophagocytosis-associated family protein [Arabidopsis thaliana] gi|17529020|gb|AAL38720.1| unknown protein [Arabidopsis thaliana] gi|23296729|gb|AAN13156.1| unknown protein [Arabidopsis thaliana] gi|332641035|gb|AEE74556.1| autophagocytosis-associated family protein [Arabidopsis thaliana]

 Score =  186 bits (471), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 91/162 (56%), Positives = 115/162 (70%), Gaps = 2/162 (1%)

Query: 7   SREAEGYLSLENICLLSLRKEDRGEETCQGEEGTSCFKEEEPTDSATLVQNYDCDKHYYD 66
           S++ EGYLSLE I +LS  +E+  E+       T C ++EE  D   LV   + + HYYD
Sbjct: 51  SKKEEGYLSLEKIIILSSLEEEIPEDESLNV-ATDCLEKEETVDHTILVPTMENEAHYYD 109

Query: 67  FHVIYNASYRVPVLYFRAYCSGGQPLVLDEIEKGLPSCSAKALSESKWTFITHEEHPYLN 126
           FH++Y+ASY+VPVLYFR YCSGG+PL LD I+K +PSCS   L ESKWTFIT EEHPYLN
Sbjct: 110 FHIVYSASYKVPVLYFRGYCSGGEPLALDVIKKDVPSCSVSLLLESKWTFITQEEHPYLN 169

Query: 127 RPWYKLHPCGTSEWMKLLFLGDTTQKKNGVAIELYLVAWFSV 168
           RPW+KLHPCGT +W+KLL    ++     + I LYLV+WFSV
Sbjct: 170 RPWFKLHPCGTEDWIKLLSQSSSSSGCQ-MPIVLYLVSWFSV 210

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449463192|ref|XP_004149318.1| PREDICTED: ubiquitin-like-conjugating enzyme ATG10-like [Cucumis sativus] gi|449518777|ref|XP_004166412.1| PREDICTED: ubiquitin-like-conjugating enzyme ATG10-like [Cucumis sativus]

 Score =  185 bits (469), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 94/162 (58%), Positives = 111/162 (68%), Gaps = 2/162 (1%)

Query: 9   EAEGYLSLENICLLSLRKEDRGEETCQGEEGTSCFKEEEPTDSATLVQ--NYDCDKHYYD 66
           + EGYLSLE ICLL  ++ +  +  C  E         E  D ATLV   +   + HYYD
Sbjct: 56  KVEGYLSLEKICLLRPQENEEEKGGCLEEADIDGAGNNEYLDEATLVPPPSDHQEVHYYD 115

Query: 67  FHVIYNASYRVPVLYFRAYCSGGQPLVLDEIEKGLPSCSAKALSESKWTFITHEEHPYLN 126
           FH+++ ASY VPVLYFRAYC  GQPL+ +EIEK LPS SA  L  SKWTFIT EEHPYLN
Sbjct: 116 FHILHCASYSVPVLYFRAYCCDGQPLMFEEIEKNLPSQSADTLLNSKWTFITQEEHPYLN 175

Query: 127 RPWYKLHPCGTSEWMKLLFLGDTTQKKNGVAIELYLVAWFSV 168
           RPW+KLHPCGTSEWMKLLFL D +   N +AIE Y+ +W SV
Sbjct: 176 RPWFKLHPCGTSEWMKLLFLSDASLFNNEIAIERYVASWLSV 217

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	168
TAIR|locus:1005716578	226	ATG10 "AT3G07525" [Arabidopsis	0.946	0.703	0.559	8.8e-47
UNIPROTKB|F1NAD4	139	ATG10 "Uncharacterized protein	0.589	0.712	0.466	2.7e-20
UNIPROTKB|Q9H0Y0	220	ATG10 "Ubiquitin-like-conjugat	0.75	0.572	0.355	3.1e-19
UNIPROTKB|A4FUE9	234	MGC138057 "MGC138057 protein"	0.595	0.427	0.423	2.8e-18
UNIPROTKB|D6RDX3	184	ATG10 "Ubiquitin-like-conjugat	0.613	0.559	0.398	3.6e-18
MGI|MGI:1914045	215	Atg10 "autophagy related 10" [	0.916	0.716	0.325	4.6e-18
UNIPROTKB|E2QS35	219	ATG10 "Uncharacterized protein	0.595	0.456	0.413	5.8e-18
RGD|1587624	214	Atg10 "autophagy related 10" [	0.738	0.579	0.363	5.8e-18
ZFIN|ZDB-GENE-051030-72	224	atg10 "ATG10 autophagy related	0.904	0.678	0.310	9.5e-18
DICTYBASE|DDB_G0268840	230	atg10 "autophagy protein 10" [	0.958	0.7	0.293	1.6e-15

TAIR|locus:1005716578 ATG10 "AT3G07525" [Arabidopsis thaliana (taxid:3702)]

 Score = 490 (177.5 bits), Expect = 8.8e-47, P = 8.8e-47
 Identities = 90/161 (55%), Positives = 114/161 (70%)

Query:     8 REAEGYLSLENICLLSLRKEDRGEETCQGEEGTSCFKEEEPTDSATLVQNYDCDKHYYDF 67
             ++ EGYLSLE I +LS  +E+  E+       T C ++EE  D   LV   + + HYYDF
Sbjct:    53 KQEEGYLSLEKIIILSSLEEEIPEDESLNV-ATDCLEKEETVDHTILVPTMENEAHYYDF 111

Query:    68 HVIYNASYRVPVLYFRAYCSGGQPLVLDEIEKGLPSCSAKALSESKWTFITHEEHPYLNR 127
             H++Y+ASY+VPVLYFR YCSGG+PL LD I+K +PSCS   L ESKWTFIT EEHPYLNR
Sbjct:   112 HIVYSASYKVPVLYFRGYCSGGEPLALDVIKKDVPSCSVSLLLESKWTFITQEEHPYLNR 171

Query:   128 PWYKLHPCGTSEWMKLLFLGDTTQKKNGVAIELYLVAWFSV 168
             PW+KLHPCGT +W+KLL    ++     + I LYLV+WFSV
Sbjct:   172 PWFKLHPCGTEDWIKLLSQSSSSSGCQ-MPIVLYLVSWFSV 211

GO:0005215 "transporter activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0004839 "ubiquitin activating enzyme activity" evidence=IMP

GO:0006914 "autophagy" evidence=IMP

GO:0050832 "defense response to fungus" evidence=IEP

UNIPROTKB|F1NAD4 ATG10 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
 Identities = 48/103 (46%), Positives = 65/103 (63%)

Query:    65 YDFHVIYNASYRVPVLYFRAYCSGGQPLVLDEIEKGLPSCSAKALSESKWTFITHEEHPY 124
             Y++HV+Y++SY+VPVLYFRA    G+PL LDEI K +  C    L E  W  IT +EHP 
Sbjct:    17 YEYHVLYSSSYQVPVLYFRACFLDGRPLTLDEIWKSVHVCYQARLQEGPWDTITQQEHPL 76

Query:   125 LNRPWYKLHPCGTSEWMKLLFLGDTTQKKNGVAIELYLVAWFS 167
             L +P++ LHPC T+E+M  +  G  +QK N      Y+V W S
Sbjct:    77 LGQPFFVLHPCRTNEFMCSILAG--SQKDN--RHRNYIVLWLS 115

GO:0005622 "intracellular" evidence=IEA

GO:0006497 "protein lipidation" evidence=IEA

GO:0019777 "Atg12 ligase activity" evidence=IEA

GO:0031401 "positive regulation of protein modification process" evidence=IEA

GO:0032446 "protein modification by small protein conjugation" evidence=IEA

GO:0034263 "autophagy in response to ER overload" evidence=IEA

UNIPROTKB|Q9H0Y0 ATG10 "Ubiquitin-like-conjugating enzyme ATG10" [Homo sapiens (taxid:9606)]

 Score = 230 (86.0 bits), Expect = 3.1e-19, P = 3.1e-19
 Identities = 48/135 (35%), Positives = 74/135 (54%)

Query:    39 GTSCFKEEE----PTDSATLVQNYDCDKHY-YDFHVIYNASYRVPVLYFRAYCSGGQPLV 93
             G +C   EE    P D   +++     +   Y++HV+Y+ SY+VPVLYFRA    G+PL 
Sbjct:    65 GQTCLPMEEAFELPLDDCEVIETAAASEVIKYEYHVLYSCSYQVPVLYFRASFLDGRPLT 124

Query:    94 LDEIEKGLPSCSAKALSESKWTFITHEEHPYLNRPWYKLHPCGTSEWMKLLFLGDTTQKK 153
             L +I +G+  C    L +  W  IT +EHP L +P++ LHPC T+E+M  +        K
Sbjct:   125 LKDIWEGVHECYKMRLLQGPWDTITQQEHPILGQPFFVLHPCKTNEFMTPVLKNSQKINK 184

Query:   154 NGVAIELYLVAWFSV 168
             N   +  Y+ +W S+
Sbjct:   185 N---VN-YITSWLSI 195

GO:0015031 "protein transport" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0034263 "autophagy in response to ER overload" evidence=IMP

GO:0006497 "protein lipidation" evidence=ISS

GO:0031401 "positive regulation of protein modification process" evidence=ISS

GO:0032446 "protein modification by small protein conjugation" evidence=IDA

GO:0006914 "autophagy" evidence=IMP

GO:0019777 "Atg12 ligase activity" evidence=ISS

GO:0005622 "intracellular" evidence=IDA

UNIPROTKB|A4FUE9 MGC138057 "MGC138057 protein" [Bos taurus (taxid:9913)]

 Score = 221 (82.9 bits), Expect = 2.8e-18, P = 2.8e-18
 Identities = 44/104 (42%), Positives = 64/104 (61%)

Query:    65 YDFHVIYNASYRVPVLYFRAYCSGGQPLVLDEIEKGLPSCSAKALSESKWTFITHEEHPY 124
             Y++HV+Y+ SY+VPVLYFRA    G+PL L +I +G+  C    L +  W  IT +EHP 
Sbjct:    96 YEYHVLYSCSYQVPVLYFRASFLDGRPLALKDIWEGVHECYKMRLLQGPWDTITQQEHPI 155

Query:   125 LNRPWYKLHPCGTSEWMKLLFLGDTTQKKNGVAIELYLVAWFSV 168
             L +P++ LHPC TSE+M  +     +QK N      Y+ +W S+
Sbjct:   156 LGQPFFVLHPCKTSEFMTPVL--KNSQKINRNVN--YITSWLSM 195

GO:0034263 "autophagy in response to ER overload" evidence=IEA

GO:0032446 "protein modification by small protein conjugation" evidence=IEA

GO:0031401 "positive regulation of protein modification process" evidence=IEA

GO:0019777 "Atg12 ligase activity" evidence=IEA

GO:0006497 "protein lipidation" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

UNIPROTKB|D6RDX3 ATG10 "Ubiquitin-like-conjugating enzyme ATG10" [Homo sapiens (taxid:9606)]

 Score = 220 (82.5 bits), Expect = 3.6e-18, P = 3.6e-18
 Identities = 43/108 (39%), Positives = 64/108 (59%)

Query:    39 GTSCFKEEE----PTDSATLVQNYDCDKHY-YDFHVIYNASYRVPVLYFRAYCSGGQPLV 93
             G +C   EE    P D   +++     +   Y++HV+Y+ SY+VPVLYFRA    G+PL 
Sbjct:    65 GQTCLPMEEAFELPLDDCEVIETAAASEVIKYEYHVLYSCSYQVPVLYFRASFLDGRPLT 124

Query:    94 LDEIEKGLPSCSAKALSESKWTFITHEEHPYLNRPWYKLHPCGTSEWM 141
             L +I +G+  C    L +  W  IT +EHP L +P++ LHPC T+E+M
Sbjct:   125 LKDIWEGVHECYKMRLLQGPWDTITQQEHPILGQPFFVLHPCKTNEFM 172

GO:0006497 "protein lipidation" evidence=IEA

GO:0019777 "Atg12 ligase activity" evidence=IEA

GO:0031401 "positive regulation of protein modification process" evidence=IEA

MGI|MGI:1914045 Atg10 "autophagy related 10" [Mus musculus (taxid:10090)]

 Score = 219 (82.2 bits), Expect = 4.6e-18, P = 4.6e-18
 Identities = 57/175 (32%), Positives = 90/175 (51%)

Query:     4 WFGSRE-AEGYLSLENICLLSLRKEDRGEETCQGEEGT--SCFKEEE----PTDSATLVQ 56
             W  ++E ++GY+     C    R ++       G   +  +C   EE    P D + + +
Sbjct:    31 WRTAKECSDGYM-----CKTQFRIKNEASTPHVGTPASVLTCLPTEENLELPMDDSEVTR 85

Query:    57 NY---DCDKHYYDFHVIYNASYRVPVLYFRAYCSGGQPLVLDEIEKGLPSCSAKALSESK 113
                  +  KH Y  HV+Y+ SY+VPVLYFRA    G+PL L++I +G+  C    L +  
Sbjct:    86 PAAVAEVIKHEY--HVLYSCSYQVPVLYFRASFLDGRPLALEDIWEGVHECYKPRLLQGP 143

Query:   114 WTFITHEEHPYLNRPWYKLHPCGTSEWMKLLFLGDTTQKKNGVAIELYLVAWFSV 168
             W  IT +EHP L +P++ LHPC T+E+M  +     +QK N      Y+ +W S+
Sbjct:   144 WDTITQQEHPILGQPFFVLHPCKTNEFMTAVL--KNSQKINRNVN--YITSWLSL 194

GO:0005515 "protein binding" evidence=IPI

GO:0005737 "cytoplasm" evidence=IEA

GO:0006497 "protein lipidation" evidence=IDA

GO:0006810 "transport" evidence=IEA

GO:0006914 "autophagy" evidence=ISO

GO:0015031 "protein transport" evidence=IEA

GO:0016874 "ligase activity" evidence=IEA

GO:0019777 "Atg12 ligase activity" evidence=IMP

GO:0031401 "positive regulation of protein modification process" evidence=IDA

GO:0032446 "protein modification by small protein conjugation" evidence=ISO

GO:0034263 "autophagy in response to ER overload" evidence=ISO

UNIPROTKB|E2QS35 ATG10 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 218 (81.8 bits), Expect = 5.8e-18, P = 5.8e-18
 Identities = 43/104 (41%), Positives = 65/104 (62%)

Query:    65 YDFHVIYNASYRVPVLYFRAYCSGGQPLVLDEIEKGLPSCSAKALSESKWTFITHEEHPY 124
             Y++HV+Y+ SY+VPVLYFRA    G+PL L +I +G   C    L +  W  IT +EHP 
Sbjct:    96 YEYHVLYSCSYQVPVLYFRASFLDGRPLALKDIWEGTHECYKTRLLQEPWDTITQQEHPI 155

Query:   125 LNRPWYKLHPCGTSEWMKLLFLGDTTQKKNGVAIELYLVAWFSV 168
             L +P++ LHPC T+E+M  +     ++K N  ++  Y+ +W SV
Sbjct:   156 LGQPFFVLHPCKTNEFMTPVL--KNSRKINR-SVN-YITSWLSV 195

GO:0034263 "autophagy in response to ER overload" evidence=IEA

GO:0032446 "protein modification by small protein conjugation" evidence=IEA

GO:0031401 "positive regulation of protein modification process" evidence=IEA

GO:0019777 "Atg12 ligase activity" evidence=IEA

GO:0006497 "protein lipidation" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

RGD|1587624 Atg10 "autophagy related 10" [Rattus norvegicus (taxid:10116)]

 Score = 218 (81.8 bits), Expect = 5.8e-18, P = 5.8e-18
 Identities = 48/132 (36%), Positives = 72/132 (54%)

Query:    41 SCFKEEE----PTDSATLVQNYDCDKHYYDFHVIYNASYRVPVLYFRAYCSGGQPLVLDE 96
             +C   EE    P D +  V          ++HV+Y+ SY+VPVLYFRA    G+PL L++
Sbjct:    66 TCLPTEENLELPVDDSEAVGPAAAAVIRQEYHVLYSCSYQVPVLYFRASFLDGRPLALED 125

Query:    97 IEKGLPSCSAKALSESKWTFITHEEHPYLNRPWYKLHPCGTSEWMKLLFLGDTTQKKNGV 156
             I +G+  C    L +  W  IT +EHP L +P++ LHPC T+E+M  +     +QK N  
Sbjct:   126 IWEGVHECYKLRLLQGPWDTITQQEHPILGQPFFVLHPCKTNEFMTAVL--KNSQKINRN 183

Query:   157 AIELYLVAWFSV 168
                 Y+ +W S+
Sbjct:   184 VN--YITSWLSI 193

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0005622 "intracellular" evidence=IEA;ISO

GO:0006497 "protein lipidation" evidence=IEA;ISO

GO:0006914 "autophagy" evidence=ISO

GO:0008150 "biological_process" evidence=ND

GO:0019777 "Atg12 ligase activity" evidence=IEA;ISO

GO:0031401 "positive regulation of protein modification process" evidence=IEA;ISO

GO:0032446 "protein modification by small protein conjugation" evidence=IEA;ISO

GO:0034263 "autophagy in response to ER overload" evidence=IEA;ISO

ZFIN|ZDB-GENE-051030-72 atg10 "ATG10 autophagy related 10 homolog (S. cerevisiae)" [Danio rerio (taxid:7955)]

 Score = 216 (81.1 bits), Expect = 9.5e-18, P = 9.5e-18
 Identities = 51/164 (31%), Positives = 83/164 (50%)

Query:    11 EGYLSLENICLLSLRKEDRGEETCQGEEGTSCFKEEEPTDSATLVQNYD--CDKHY---Y 65
             EG++    +  +     D+  E+ Q E  T    ++   D+       D  C+ H    Y
Sbjct:    46 EGFMKKTVLIPVKSSLLDKQHESIQAEN-TELPTDDFEADAEDETAGVDAVCESHAVLRY 104

Query:    66 DFHVIYNASYRVPVLYFRAYCSGGQPLVLDEIEKGLPSCSAKALSESKWTFITHEEHPYL 125
             ++HV+Y+ SY++PVLYFRA    G+ L L+E+   +     + L +  W  +T +EHP L
Sbjct:   105 EYHVLYSCSYQIPVLYFRASALDGRSLSLEEVWSNVHPNYRQRLKQEPWDTLTQQEHPLL 164

Query:   126 NRPWYKLHPCGTSEWMK-LLFLGDTTQKKNGVAIELYLVAWFSV 168
              +P++ LHPC T E+MK  L L     ++       Y+V+W SV
Sbjct:   165 GQPFFMLHPCRTEEFMKPALELAHAQNRRVN-----YIVSWLSV 203

GO:0003674 "molecular_function" evidence=ND

DICTYBASE|DDB_G0268840 atg10 "autophagy protein 10" [Dictyostelium discoideum (taxid:44689)]

 Score = 195 (73.7 bits), Expect = 1.6e-15, P = 1.6e-15
 Identities = 52/177 (29%), Positives = 86/177 (48%)

Query:     7 SREAEGYLSLENICLLSLRKEDRGEETCQGEEGTSC--FKEEEPT--DSATLV--QNYDC 60
             + E++GY + +    ++    +      + +   +   F+E + T  DS+T +   N + 
Sbjct:    36 NNESKGYFTTKRYHKINNNNNNNNNNNIENKNNNNIENFEEIKETIDDSSTTIIKSNNNN 95

Query:    61 DKH---YYDFHVIYNASYRVPVLYFRAYCS-GGQPLVLDEIEKGLPSCSAKALSESKWTF 116
             +++    + F +IY+ SY+VPVLY   + S    PL  +EI   LP  +     +S   +
Sbjct:    96 NENNIIIFQFDIIYSKSYQVPVLYLNGFSSFDSSPLSWNEIWNNLPLSNLDKNQQSTIPY 155

Query:   117 ITHEEHPYLNRPWYKLHPCGTSEWMKLLFL-----GDTTQKKNGVAIELYLVAWFSV 168
             IT  EHP L  P Y+LHPC T   MKL+ L      D   KK     + YL++W S+
Sbjct:   156 ITQVEHPILGNPCYQLHPCETDNLMKLILLKEKDYNDNNDKKEYFK-DYYLLSWLSI 211

GO:0016874 "ligase activity" evidence=IEA

GO:0015031 "protein transport" evidence=IEA

GO:0006914 "autophagy" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	6.3.2	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	eugene3.00141226	hypothetical protein (234 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	gw1.IV.2775.1	hypothetical protein (677 aa)					•		•		0.517

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	168
pfam03987	62	pfam03987, Autophagy_act_C, Autophagocytosis assoc	3e-18

>gnl|CDD|202841 pfam03987, Autophagy_act_C, Autophagocytosis associated protein, active-site domain

 Score = 73.8 bits (182), Expect = 3e-18
 Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 7/68 (10%)

Query: 68  HVIYNASYRVPVLYFRAYCSGGQPLVLDEIEKGLPSCSAKALSESKWTFITHEEHPYLNR 127
           ++ Y+ SY+VP LY R Y   G+PL  +E+ + +               +T EEHP+L  
Sbjct: 1   YITYDKSYQVPRLYLRGYDEDGKPLSPEEMFEDIVPDYRDKT-------VTLEEHPFLGI 53

Query: 128 PWYKLHPC 135
           PWY +HPC
Sbjct: 54  PWYSIHPC 61

Autophagocytosis is a starvation-induced process responsible for transport of cytoplasmic proteins to the vacuole. The cysteine residue within the HPC motif is the putative active-site residue for recognition of the Apg5 subunit of the autophagosome complex. Length = 62

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	168
KOG2981	295	consensus Protein involved in autophagocytosis dur	99.95
PF03987	62	Autophagy_act_C: Autophagocytosis associated prote	99.92
KOG4741	173	consensus Uncharacterized conserved protein [Funct	99.86

>KOG2981 consensus Protein involved in autophagocytosis during starvation [General function prediction only]

Probab=99.95  E-value=8.8e-28  Score=199.63  Aligned_cols=118  Identities=26%  Similarity=0.470  Sum_probs=99.5

Q ss_pred             CCCCCCCCCCcccccc---cC----C--CCeEEEEEEEEEeCCCCCeEEEEEEecCCCCCCCHHHHHhhCCcchhhhhcc
Q 039401           41 SCFKEEEPTDSATLVQ---NY----D--CDKHYYDFHVIYNASYRVPVLYFRAYCSGGQPLVLDEIEKGLPSCSAKALSE  111 (168)
Q Consensus        41 ~~~~~~~~~D~~~~~~---~~----~--~~~~~~e~~I~YS~sYqVPvLyf~~~~~~g~pL~leei~~~lp~~~~~~l~~  111 (168)
                      .|++.++.+|.++++.   +.    .  -+.|+||++|+|+++||+|+||++||+++|+||+.++|+++++++++     
T Consensus       148 e~~e~d~~edp~~~~s~~~~~~~dd~gil~tRtYDL~I~YdkyYqtPRl~l~Gyde~r~pLt~E~myEDvS~Dha-----  222 (295)
T KOG2981|consen  148 ELEESDEEEDPATFVSKAVAGLADDSGILQTRTYDLYITYDKYYQTPRLWLVGYDENRQPLTVEQMYEDVSQDHA-----  222 (295)
T ss_pred             cccccccccCHHHHhhhhccccccccccceeeEEEEEEEeeccccCceEEEEEecCCCCcCCHHHHHHHhhhhhc-----
Confidence            4555555555455533   11    1  25799999999999999999999999999999999999999998874     


Q ss_pred             CCeeeeeeecCCCCCCC-eEEEecCCchHHHHHhhcccccccCCcccccchhhhhc
Q 039401          112 SKWTFITHEEHPYLNRP-WYKLHPCGTSEWMKLLFLGDTTQKKNGVAIELYLVAWF  166 (168)
Q Consensus       112 ~~~~~IT~~~HP~l~~p-~~~IHPC~Ta~~m~~l~~~~~~~~~~~~~~~~YL~~WL  166 (168)
                        .++||++.||++..+ ..+||||+||++|+.|++..+ .++.++.+++||.+||
T Consensus       223 --~KTvTiE~hPh~~~~~m~SVHPCkHa~vMkklI~~~~-e~g~~l~Vd~YL~lFL  275 (295)
T KOG2981|consen  223 --KKTVTIEKHPHLPGPNMASVHPCKHAEVMKKLIDQVR-ERGDELGVDQYLILFL  275 (295)
T ss_pred             --cCeEEeccCCCCCCCCccccccchhHHHHHHHHHHHH-hcCCCcceehhHHHHH
Confidence              789999999999777 999999999999999998744 5677889999999997

>PF03987 Autophagy_act_C: Autophagocytosis associated protein, active-site domain ; InterPro: IPR007135 Proteins in this entry belong to the Atg3 group of proteins and the Atg3 conjugation enzymes

Probab=99.92  E-value=3.8e-25  Score=149.10  Aligned_cols=62  Identities=53%  Similarity=1.018  Sum_probs=48.2

Q ss_pred             EEEEeCCCCCeEEEEEEecCCCCCCCHHHHHhhCCcchhhhhccCCeeeeeeecCCCCCCCeEEEecCC
Q 039401           68 HVIYNASYRVPVLYFRAYCSGGQPLVLDEIEKGLPSCSAKALSESKWTFITHEEHPYLNRPWYKLHPCG  136 (168)
Q Consensus        68 ~I~YS~sYqVPvLyf~~~~~~g~pL~leei~~~lp~~~~~~l~~~~~~~IT~~~HP~l~~p~~~IHPC~  136 (168)
                      ||+||++||||+||||+|+++|.||++++|+++++....       ..+||+++||++|.|||+||||+
T Consensus         1 ~I~Ys~~YqvP~L~f~~~~~~g~~l~~~~~~~~~~~~~~-------~~~it~~~HP~l~~p~~~iHPC~   62 (62)
T PF03987_consen    1 HITYSPSYQVPVLYFRGYDEDGSPLSLEEVYEDLSPDSA-------DSTITQEEHPILGIPWYSIHPCD   62 (62)
T ss_dssp             EEEEETTTTEEEEEEEEEETT--B--HHHHHTTS-TTTH-------HHHEEEEE-TTBSS-EEEE-S-S
T ss_pred             CEEecCccCCCEEEEEEECCCCCCCCHHHHHHhhccccc-------cceeecccCCCCCCceEEEcCCC
Confidence            799999999999999999999999999999999965554       33499999999999999999996

Autophagy is a degradative transport pathway that delivers cytosolic proteins to the lysosome (vacuole) [] and is induced by starvation []. Cytosolic proteins appear inside the vacuole enclosed in autophagic vesicles. Autophagy significantly differs from other transport pathways by using double membrane layered transport intermediates, called autophagosomes [, ]. The breakdown of vesicular transport intermediates is a unique feature of autophagy []. Autophagy can also function in the elimination of invading bacteria and antigens []. Atg3 is the E2 enzyme for the LC3 lipidation process []. It is essential for autophagocytosis. The super protein complex, the Atg16L complex, consists of multiple Atg12-Atg5 conjugates. Atg16L has an E3-like role in the LC3 lipidation reaction. The activated intermediate, LC3-Atg3 (E2), is recruited to the site where the lipidation takes place []. Atg3 catalyses the conjugation of Atg8 and phosphatidylethanolamine (PE). Atg3 has an alpha/beta-fold, and its core region is topologically similar to canonical E2 enzymes. Atg3 has two regions inserted in the core region and another with a long alpha-helical structure that protrudes from the core region as far as 30 A []. It interacts with atg8 through an intermediate thioester bond between Cys-288 and the C-terminal Gly of atg8. It also interacts with the C-terminal region of the E1-like atg7 enzyme. Autophagocytosis is a starvation-induced process responsible for transport of cytoplasmic proteins to the vacuole. The cysteine residue within the HPC motif is the putative active-site residue for recognition of the Apg5 subunit of the autophagosome complex [].; PDB: 2DYT_A.

>KOG4741 consensus Uncharacterized conserved protein [Function unknown]

Probab=99.86  E-value=4.1e-23  Score=161.63  Aligned_cols=104  Identities=36%  Similarity=0.669  Sum_probs=87.1

Q ss_pred             CCcccccccCCCCeEEEEEEEEEeCCCCCeEEEEEEecCCCCCCCHHHHHhhCCcchhhhhccCCeeeeeeecCCCCCCC
Q 039401           49 TDSATLVQNYDCDKHYYDFHVIYNASYRVPVLYFRAYCSGGQPLVLDEIEKGLPSCSAKALSESKWTFITHEEHPYLNRP  128 (168)
Q Consensus        49 ~D~~~~~~~~~~~~~~~e~~I~YS~sYqVPvLyf~~~~~~g~pL~leei~~~lp~~~~~~l~~~~~~~IT~~~HP~l~~p  128 (168)
                      ++..++-+.+. +.+..+.||.|+.+||||+|||+.+..+|+||..-.|-+    .++..+.++.+..||+.+||+||.|
T Consensus        50 a~~s~i~t~~d-~vi~~e~hilyn~kyqvp~lwf~f~~~ngrpl~~r~v~E----i~~t~l~e~~~~~Itq~eHP~Lg~p  124 (173)
T KOG4741|consen   50 AKQSAICTFDD-QVINREAHFLYNRKYQVPELWFMFYCRNGRPLRVRQVAE----ILGTKLEENDAIVITQSEHPTLGIP  124 (173)
T ss_pred             eeeeeeeehhH-HHhhhhheEEEEeeecchhheeehhhcCCCchhhhhhHH----hhcCccccCccceeeeccCCcccce
Confidence            34444444444 789999999999999999999999999999999885444    4555566778899999999999999


Q ss_pred             eEEEecCCchHHHHHhhcccccccCCcccccchhhhhccC
Q 039401          129 WYKLHPCGTSEWMKLLFLGDTTQKKNGVAIELYLVAWFSV  168 (168)
Q Consensus       129 ~~~IHPC~Ta~~m~~l~~~~~~~~~~~~~~~~YL~~WLsv  168 (168)
                      +|-||||+|+++|+.+...           .+|+++|||+
T Consensus       125 yy~LHPC~Tse~mke~~k~-----------sNyilswiS~  153 (173)
T KOG4741|consen  125 YYKLHPCDTSELMKEIPKR-----------SNYILSWISA  153 (173)
T ss_pred             eeeecCCcHHHHHhhcCCc-----------hHHHHHHHHH
Confidence            9999999999999998532           2999999985

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	168
4gsl_C	312	Crystal Structure Of An Atg7-Atg3 Crosslinked Compl		8e-05
2dyt_A	312	The Crystal Structure Of Saccharomyces Cerevisiae A		1e-04

>pdb|4GSL|C Chain C, Crystal Structure Of An Atg7-Atg3 Crosslinked Complex Length = 312

Iteration: 1
 Score = 42.7 bits (99), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 9/88 (10%)
Query: 60  CDKHYYDFHVIYNASYRVPVLYFRAYCSGGQPLVLDEIEKGLPSCSAKALSESKWTFITH 119
             + YYD ++ Y+ SYRVP +Y   + S G PL     E+     SA   +++     T 
Sbjct: 166 AQERYYDLYIAYSTSYRVPKMYIVGFNSNGSPL---SPEQMFEDISADYRTKTA----TI 218
Query: 120 EEHPYLNRPW--YKLHPCGTSEWMKLLF 145
           E+ P+         +HPC  +  MK+L 
Sbjct: 219 EKLPFYKNSVLSVSIHPCKHANVMKILL 246

>pdb|2DYT|A Chain A, The Crystal Structure Of Saccharomyces Cerevisiae Atg3 Length = 312

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 9/86 (10%)
Query: 62  KHYYDFHVIYNASYRVPVLYFRAYCSGGQPLVLDEIEKGLPSCSAKALSESKWTFITHEE 121
           + YYD ++ Y+ SYRVP +Y   + S G PL     E+     SA   +++     T E+
Sbjct: 168 ERYYDLYIAYSTSYRVPKMYIVGFNSNGSPL---SPEQMFEDISADYRTKTA----TIEK 220
Query: 122 HPYLNRPW--YKLHPCGTSEWMKLLF 145
            P+         +HPC  +  MK+L 
Sbjct: 221 LPFYKNSVLSVSIHPCKHANVMKILL 246

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	168
2dyt_A	312	Autophagy-related protein 3; E2 fold, ligase; 2.50	5e-21
2lpu_A	152	Kmatg10; autophagy, E2-like, proteolysis, protein	6e-17

>2dyt_A Autophagy-related protein 3; E2 fold, ligase; 2.50A {Saccharomyces cerevisiae} Length = 312

 Score = 86.4 bits (213), Expect = 5e-21
 Identities = 24/115 (20%), Positives = 49/115 (42%), Gaps = 9/115 (7%)

Query: 45  EEEPTDSATLVQNYDCDKHYYDFHVIYNASYRVPVLYFRAYCSGGQPLVLDEIEKGLPSC 104
           + E  ++   +      + YYD ++ Y+ SYRVP +Y   + S G PL  +++ + +   
Sbjct: 151 DTEEFNAKGGLAKDMAQERYYDLYIAYSTSYRVPKMYIVGFNSNGSPLSPEQMFEDIS-- 208

Query: 105 SAKALSESKWTFITHEEHPYLNRPWY--KLHPCGTSEWMKLLFLGDTTQKKNGVA 157
                ++ +    T E+ P+         +HPC  +  MK+L       ++    
Sbjct: 209 -----ADYRTKTATIEKLPFYKNSVLSVSIHPCKHANVMKILLDKVRVVRQRRRK 258

>2lpu_A Kmatg10; autophagy, E2-like, proteolysis, protein transport; NMR {Kluyveromyces marxianus} Length = 152

 Score = 72.5 bits (177), Expect = 6e-17
 Identities = 18/105 (17%), Positives = 36/105 (34%), Gaps = 13/105 (12%)

Query: 64  YYDFHVIYNASYRVPVLYFRAYCSGGQPLVLDEIEKGLPSCSAKALSESKWTFITHEEHP 123
             + H+ Y+  Y VP + FR +    +  +       L     +++       +T     
Sbjct: 50  LLELHIYYDHVYHVPSIKFRLWSLDTEEDISSLRLLTLSDSELRSILNLGTFSVTLSTDM 109

Query: 124 YLNRPWYKLHPCGTSEWMKLLFLGDTTQKKNGVAIELYLVAWFSV 168
            +   +Y ++ C T   +             G  +E YL  W S+
Sbjct: 110 EMKSVYYYINNCDTDANV-------------GSDVEHYLTRWISL 141

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	168
3vx8_B	292	Autophagy-related protein 3; E1-E2 complex, ligase	100.0
2dyt_A	312	Autophagy-related protein 3; E2 fold, ligase; 2.50	100.0
4ebr_A	169	Ubiquitin-like-conjugating enzyme ATG10; autophagy	99.94
3vx7_B	152	E2; ubiquitin conjugation; 3.20A {Kluyveromyces ma	99.9
2lpu_A	152	Kmatg10; autophagy, E2-like, proteolysis, protein	99.69

>3vx8_B Autophagy-related protein 3; E1-E2 complex, ligase; 3.11A {Arabidopsis thaliana}

Probab=100.00  E-value=2.8e-34  Score=242.77  Aligned_cols=100  Identities=20%  Similarity=0.345  Sum_probs=89.4

Q ss_pred             CCeEEEEEEEEEeCCCCCeEEEEEEecCCCCCCCHHHHHhhCCcchhhhhccCCeeeeeeecCCCCCCCeEEEecCCchH
Q 039401           60 CDKHYYDFHVIYNASYRVPVLYFRAYCSGGQPLVLDEIEKGLPSCSAKALSESKWTFITHEEHPYLNRPWYKLHPCGTSE  139 (168)
Q Consensus        60 ~~~~~~e~~I~YS~sYqVPvLyf~~~~~~g~pL~leei~~~lp~~~~~~l~~~~~~~IT~~~HP~l~~p~~~IHPC~Ta~  139 (168)
                      .+.|+|++||+||++||||+|||+||+++|+||++++|+++++++++       .++||+++||+|+.|+++||||+||+
T Consensus       169 ~~~RtYd~~ItYs~~YqtPrLyl~gy~~~g~PL~~ee~~edi~~d~~-------~ktVT~e~HP~l~~p~~siHPC~ha~  241 (292)
T 3vx8_B          169 LRTRTYDLSITYDKYYQTPRVWLTGYDESRMLLQPELVMEDVSQDHA-------RKTVTIEDHPHLPGKHASVHPCRHGA  241 (292)
T ss_dssp             CCCEEEEEEEEEETTTTEEEEEEEEECTTSCBCCGGGGGGTSCCC-----------CEEEEECSSSSSEEEEECGGGHHH
T ss_pred             cceEEEEEEEEEECCCCCCeEEEEEECCCCCcCCHHHHHHHhhhhhh-------cceEEeecCCccCCceeEEecCCcHH
Confidence            35899999999999999999999999999999999999999988874       68999999999999999999999999


Q ss_pred             HHHHhhcccccccCCcccccchhhhhcc
Q 039401          140 WMKLLFLGDTTQKKNGVAIELYLVAWFS  167 (168)
Q Consensus       140 ~m~~l~~~~~~~~~~~~~~~~YL~~WLs  167 (168)
                      +|+.++++. ..++.++++++||++||.
T Consensus       242 vMk~l~~~~-~~~~~~~~v~~YL~ifLk  268 (292)
T 3vx8_B          242 VMKKIIDVL-MSRGVEPEVDKYLFLFLK  268 (292)
T ss_dssp             HHHHHHHHH-HHHTCCCCGGGHHHHHHH
T ss_pred             HHHHHHHHH-HhcCCCcChhhHHHHHHH
Confidence            999999873 345667889999999996

>2dyt_A Autophagy-related protein 3; E2 fold, ligase; 2.50A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.4e-33  Score=240.61  Aligned_cols=102  Identities=25%  Similarity=0.493  Sum_probs=90.5

Q ss_pred             CCCeEEEEEEEEEeCCCCCeEEEEEEecCCCCCCCHHHHHhhCCcchhhhhccCCeeeeeeecCCC--CCCCeEEEecCC
Q 039401           59 DCDKHYYDFHVIYNASYRVPVLYFRAYCSGGQPLVLDEIEKGLPSCSAKALSESKWTFITHEEHPY--LNRPWYKLHPCG  136 (168)
Q Consensus        59 ~~~~~~~e~~I~YS~sYqVPvLyf~~~~~~g~pL~leei~~~lp~~~~~~l~~~~~~~IT~~~HP~--l~~p~~~IHPC~  136 (168)
                      ..+.++|+|||+||++||||||||+||+++|+||++++|+++++++++       +++||+++||+  +|.||++||||+
T Consensus       165 ~~~~rtYd~~ItYs~sYqvPvLyf~gy~~dg~PL~~~e~~edi~~d~~-------~ktVT~e~HP~~~lg~p~~sIHPCk  237 (312)
T 2dyt_A          165 MAQERYYDLYIAYSTSYRVPKMYIVGFNSNGSPLSPEQMFEDISADYR-------TKTATIEKLPFYKNSVLSVSIHPCK  237 (312)
T ss_dssp             CCCCEEEEEEEEEETTTTEEEEEEEEEETTCCBCCHHHHHTTSCTTTH-------HHHEEEEECTTBSSCCEEEEECSCS
T ss_pred             ccceEEEEEEEEEecCccCCeEEEEeECCCCCCCCHHHHHHHHHHhhc-------cCceecccCCCccCCCceEEEecCc
Confidence            467899999999999999999999999999999999999999988764       69999999999  999999999999


Q ss_pred             chHHHHHhhccccc--------------------------ccCCcccccchhhhhcc
Q 039401          137 TSEWMKLLFLGDTT--------------------------QKKNGVAIELYLVAWFS  167 (168)
Q Consensus       137 Ta~~m~~l~~~~~~--------------------------~~~~~~~~~~YL~~WLs  167 (168)
                      |+++|+.++.+...                          +.+.++.+++||++||.
T Consensus       238 ta~vMk~l~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~irvd~YLviFLK  294 (312)
T 2dyt_A          238 HANVMKILLDKVRVVRQRRRKELQEEQELDGVGDWEDLQDDIDDSLRVDQYLIVFLK  294 (312)
T ss_dssp             SSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTC--------CCCCGGGHHHHHHH
T ss_pred             HHHHHHHHHHHHhhhhhhccccccccccccccccchhcccccCCCcCcchhHHHHHH
Confidence            99999999965331                          24455789999999995

>4ebr_A Ubiquitin-like-conjugating enzyme ATG10; autophagy, ligase, protein binding, A ATG5, thiolation; 2.70A {Saccharomyces cerevisiae}

Probab=99.94  E-value=2.8e-29  Score=198.20  Aligned_cols=101  Identities=19%  Similarity=0.234  Sum_probs=71.7

Q ss_pred             cCCCCeEEEEEEEEEeCCCCCeEEEEEEecCCCCCCCHHHHHhhCCcchhh-hhccCCeeeeeeecCCCCCCCeEEEecC
Q 039401           57 NYDCDKHYYDFHVIYNASYRVPVLYFRAYCSGGQPLVLDEIEKGLPSCSAK-ALSESKWTFITHEEHPYLNRPWYKLHPC  135 (168)
Q Consensus        57 ~~~~~~~~~e~~I~YS~sYqVPvLyf~~~~~~g~pL~leei~~~lp~~~~~-~l~~~~~~~IT~~~HP~l~~p~~~IHPC  135 (168)
                      ..+.+.+++||||+||++||||+||||+|+.+|.++...... .+|..... ....+.++.+++.+||++|.|||+||||
T Consensus        57 ~~~~~~~~id~~I~Ys~sYqVPvL~f~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~t~~~~~~Hp~~g~p~~~iHPC  135 (169)
T 4ebr_A           57 IENKLLNHIELYLTYSKVYNEPLLLLRIWEEKSIDGIPMTKL-MLPTDIESLLDVQGKFQLGLDTIINLEGSVWYSFHPC  135 (169)
T ss_dssp             ----CCEEEEEEEEEETTTTEEEEEEEEEEEEEETTEEEEEE-CCHHHHHHHHTTTTCCCCSSEEEEEETTEEEEECCSS
T ss_pred             CCcCcceEEEEEEEEecccCCcEEEEEEEcCCCCccchhhhh-cchHHHHHHhccccceEEEeccCCCCCCCceEEEcCc
Confidence            345678999999999999999999999999998764322110 01111111 1122456777889999999999999999


Q ss_pred             CchHHHHHhhcccccccCCcccccchhhhhccC
Q 039401          136 GTSEWMKLLFLGDTTQKKNGVAIELYLVAWFSV  168 (168)
Q Consensus       136 ~Ta~~m~~l~~~~~~~~~~~~~~~~YL~~WLsv  168 (168)
                      +|+++|+...          ...++||.+|||+
T Consensus       136 ~T~~~m~~~~----------~~~~~YL~~WlSl  158 (169)
T 4ebr_A          136 DTSCIVGDQA----------EFMSTYLRRWVSI  158 (169)
T ss_dssp             CGGGSCCTTC----------TTGGGGHHHHHHH
T ss_pred             CcHHHHhccc----------cchHhHHHHHHHH
Confidence            9999997532          2235899999985

>3vx7_B E2; ubiquitin conjugation; 3.20A {Kluyveromyces marxianus} PDB: 2lpu_A

Probab=99.90  E-value=3.2e-25  Score=172.13  Aligned_cols=96  Identities=19%  Similarity=0.237  Sum_probs=75.3

Q ss_pred             cCCCCeEEEEEEEEEeCCCCCeEEEEEEecCCCCCCCHHHHHhhC--Cc-chhhhhccCCeeeeeeecCCCCCCCeEEEe
Q 039401           57 NYDCDKHYYDFHVIYNASYRVPVLYFRAYCSGGQPLVLDEIEKGL--PS-CSAKALSESKWTFITHEEHPYLNRPWYKLH  133 (168)
Q Consensus        57 ~~~~~~~~~e~~I~YS~sYqVPvLyf~~~~~~g~pL~leei~~~l--p~-~~~~~l~~~~~~~IT~~~HP~l~~p~~~IH  133 (168)
                      .++++..++||||+||.+||||+||||+|..+  .+...++++.+  |. .....++.. +.+|++++||+++.|||.||
T Consensus        43 ~~~~~~~~~e~~I~Ys~~YqvPvL~fR~~~~~--~~~~ie~~~~~~~~~~~i~~ll~i~-~~sI~L~~hp~l~~~wy~IH  119 (152)
T 3vx7_B           43 VRLKTDTLLELHIYYDHVYHVPSIKFRLWSLD--TEEDISSLRLLTLSDSELRSILNLG-TFSVTLSTDMEMKSVYYYIN  119 (152)
T ss_dssp             EEEETTEEEEEEEEECSSSSSEEEEEEEEEEE--ECSSSEEEEECCCCHHHHHHHSCCT-TCCEEEEECTTSSSEEEEEC
T ss_pred             ccCCCceEEEEEEEEeccccCceEEEEeecCC--cccchhhheeccCchhhHHHHhccc-ceeEEeeeccccCCceEEEc
Confidence            35567899999999999999999999999977  33333343333  32 223344555 78999999999999999999


Q ss_pred             cCCchHHHHHhhcccccccCCcccccchhhhhccC
Q 039401          134 PCGTSEWMKLLFLGDTTQKKNGVAIELYLVAWFSV  168 (168)
Q Consensus       134 PC~Ta~~m~~l~~~~~~~~~~~~~~~~YL~~WLsv  168 (168)
                      ||+|+++|+...             .+||.+|+|+
T Consensus       120 PCdT~eivg~~~-------------~nYL~rW~Sv  141 (152)
T 3vx7_B          120 NCDTDANVGSDV-------------EHYLTRWISL  141 (152)
T ss_dssp             CTTHHHHHCSCS-------------TTHHHHHHHH
T ss_pred             CccHHHHhccch-------------hhHHHHHHHH
Confidence            999999998532             4999999985

>2lpu_A Kmatg10; autophagy, E2-like, proteolysis, protein transport; NMR {Kluyveromyces marxianus}

Probab=99.69  E-value=2.3e-21  Score=149.41  Aligned_cols=96  Identities=19%  Similarity=0.284  Sum_probs=75.0

Q ss_pred             CCCCeEEEEEEEEEeCCCCCeEEEEEEecCCCCCCCHHHHHhhCCcc--hhhhhccCCeeeeeeecCCCCCCCeEEEecC
Q 039401           58 YDCDKHYYDFHVIYNASYRVPVLYFRAYCSGGQPLVLDEIEKGLPSC--SAKALSESKWTFITHEEHPYLNRPWYKLHPC  135 (168)
Q Consensus        58 ~~~~~~~~e~~I~YS~sYqVPvLyf~~~~~~g~pL~leei~~~lp~~--~~~~l~~~~~~~IT~~~HP~l~~p~~~IHPC  135 (168)
                      +.....++|++|+||++||||+|+||.|+.++ .-+.+.+.-.+|.+  .+..+..+. ..|++..||..+.+||+||||
T Consensus        44 ~~~~~~~iE~~I~Y~~~YqVP~L~fRlwe~~~-~~~i~~~~l~fp~~~~~~~iL~i~~-fsi~Ld~~~~~~s~Wy~IHpC  121 (152)
T 2lpu_A           44 RLKTDTLLELHIYYDHVYHVPSIKFRLWSLDT-EEDISSLRLLTLSDSELRSILNLGT-FSVTLSTDMEMKSVYYYINNC  121 (152)
Confidence            45678899999999999999999999999886 32344333334554  234444444 568999999999999999999


Q ss_pred             CchHHHHHhhcccccccCCcccccchhhhhccC
Q 039401          136 GTSEWMKLLFLGDTTQKKNGVAIELYLVAWFSV  168 (168)
Q Consensus       136 ~Ta~~m~~l~~~~~~~~~~~~~~~~YL~~WLsv  168 (168)
                      +|+++|+..             .+.||.+|+|+
T Consensus       122 dTs~iVg~~-------------~~~YL~rW~Sv  141 (152)
T 2lpu_A          122 DTDANVGSD-------------VEHYLTRWISL  141 (152)
Confidence            999999862             34999999996

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00