Citrus Sinensis ID: 039415

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------
MSTSCGQASWLSNITEIGDHKISQTNIVILFSTVAVICFLWPFFMKVGKGNSQLPPGPRGLPLVVYLPFLGRNLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTITASTLTYRASDTVFASYGSKWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNKDSKAIDIGDIAYVTMINMVSSMLWGGTTQGEKGTSLAAEFRVEVSQALQLLARPNVSDFFPMLARFDLQGVERDSKNVLQSIE
cccccccHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHccccEEEEcccccEEEEccHHHHHHHHHHcccccccccccHHHHHHHcccccEEcccccHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHcccccEEHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHcccccccHHHcccccccccHHHHHHHHHHHcc
cccccccccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccEEccHHHcccccHHHHHHHHHHcccEEEEEEccccEEEEccHHHHHHHHHHccHHHccccccHHHHHHEcccccEEEccccHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHccccHHcHHHHHHHcccHHHHHHHHHHHHHcc
mstscgqaswlsniteigdhkisqtNIVILFSTVAVICFLWPffmkvgkgnsqlppgprglplvvylpflgrnLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDrkfanrnptitastltyrasdtvfasYGSKWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYnkdskaidigdIAYVTMINMVSSMlwggttqgekgtSLAAEFRVEVSQALQLlarpnvsdffpmLARFdlqgverdskNVLQSIE
mstscgqasWLSNITEIGDHKISQTNIVILFSTVAVICFLWPFFMKVGKGNSQLPPGPRGLPLVVYLPFLGRNLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHdrkfanrnptitastltyrasDTVFASYGSKWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIReiynkdskaidiGDIAYVTMINMVSSMLWGGTTQGEKGTSLAAEFRVEVSQALQLLARPNVSDFFPMLARFdlqgverdsknvlqsie
MSTSCGQASWLSNITEIGDHKISQTNIVILFSTVAVICFLWPFFMKVGKGNSQlppgprglplvvylpFLGRNLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTITASTLTYRASDTVFASYGSKWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNKDSKAIDIGDIAYVTMINMVSSMLWGGTTQGEKGTSLAAEFRVEVSQALQLLARPNVSDFFPMLARFDLQGVERDSKNVLQSIE
*******ASWLSNITEIGDHKISQTNIVILFSTVAVICFLWPFFMKVGKGNSQLPPGPRGLPLVVYLPFLGRNLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTITASTLTYRASDTVFASYGSKWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNKDSKAIDIGDIAYVTMINMVSSMLWGGTTQGEKGTSLAAEFRVEVSQALQLLARPNVSDFFPMLARFDLQG*************
****CGQASWLSNITEIGDHKISQTNIVILFSTVAVICFLWPF****************GLPLVVYLPFLGRNLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTITASTLTYRASDTVFASYGSKWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNK*SKAIDIGDIAYVTMINMVSSMLWGGTTQGEK**SLAAEFRVEVSQALQLLARPNVSDFFPMLARFDLQGVERDSKNVLQ*IE
********SWLSNITEIGDHKISQTNIVILFSTVAVICFLWPFFMKVGKGNSQLPPGPRGLPLVVYLPFLGRNLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTITASTLTYRASDTVFASYGSKWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNKDSKAIDIGDIAYVTMINMVSSMLWGGTTQGEKGTSLAAEFRVEVSQALQLLARPNVSDFFPMLARFDLQGVER**********
**TSCGQASWLSNITEIGDHKISQTNIVILFSTVAVICFLWPFFMKVGKGNSQLPPGPRGLPLVVYLPFLGRNLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTITASTLTYRASDTVFASYGSKWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNKDSKAIDIGDIAYVTMINMVSSMLWGGTTQGEKGTSLAAEFRVEVSQALQLLARPNVSDFFPMLARFDLQGVERDSKNVLQSIE
iiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MSTSCGQASWLSNITEIGDHKISQTNIVILFSTVAVICFLWPFFMKVGKGNSQLPPGPRGLPLVVYLPFLGRNLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTITASTLTYRASDTVFASYGSKWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNKDSKAIDIGDIAYVTMINMVSSMLWGGTTQGEKGTSLAAEFRVEVSQALQLLARPNVSDFFPMLARFDLQGVERDSKNVLQSIE
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query267 2.2.26 [Sep-21-2011]
Q9SD85 513 Flavonoid 3'-monooxygenas no no 0.767 0.399 0.317 6e-29
P37120 513 Flavonoid 3',5'-hydroxyla N/A no 0.801 0.417 0.308 2e-27
O04773 523 Flavonoid 3',5'-hydroxyla N/A no 0.786 0.401 0.310 5e-27
P48419 508 Flavonoid 3',5'-hydroxyla N/A no 0.801 0.421 0.304 2e-26
O64636 512 Cytochrome P450 76C1 OS=A no no 0.850 0.443 0.266 3e-26
P48418 506 Flavonoid 3',5'-hydroxyla N/A no 0.801 0.422 0.304 5e-26
Q96418 510 Flavonoid 3',5'-hydroxyla N/A no 0.883 0.462 0.274 8e-26
Q42798 509 Cytochrome P450 93A1 OS=G no no 0.857 0.449 0.315 2e-25
Q96581 516 Flavonoid 3',5'-hydroxyla N/A no 0.823 0.426 0.304 3e-25
P93147 499 Isoflavone 2'-hydroxylase N/A no 0.786 0.420 0.294 4e-25
>sp|Q9SD85|F3PH_ARATH Flavonoid 3'-monooxygenase OS=Arabidopsis thaliana GN=CYP75B1 PE=1 SV=1 Back     alignment and function desciption
 Score =  127 bits (320), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 65/205 (31%), Positives = 109/205 (53%)

Query: 51  NSQLPPGPRGLPLVVYLPFLGRNLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEV 110
           N++LPPGP   P++  LP +G   HR +  +   YGPI  L +G    ++ +S ++ ++ 
Sbjct: 30  NNRLPPGPNPWPIIGNLPHMGTKPHRTLSAMVTTYGPILHLRLGFVDVVVAASKSVAEQF 89

Query: 111 VRDHDRKFANRNPTITASTLTYRASDTVFASYGSKWQILRKLFVHEVLSKANLDAFYAFR 170
           ++ HD  FA+R P   A  + Y   D VFA YG +W++LRK+    + S   L+ F   R
Sbjct: 90  LKIHDANFASRPPNSGAKHMAYNYQDLVFAPYGHRWRLLRKISSVHLFSAKALEDFKHVR 149

Query: 171 RDEMRKIIREIYNKDSKAIDIGDIAYVTMINMVSSMLWGGTTQGEKGTSLAAEFRVEVSQ 230
           ++E+  + RE+    +K +++G +  + ++N +   + G    G      A EFR  V++
Sbjct: 150 QEEVGTLTRELVRVGTKPVNLGQLVNMCVVNALGREMIGRRLFGADADHKADEFRSMVTE 209

Query: 231 ALQLLARPNVSDFFPMLARFDLQGV 255
            + L    N+ DF P L   DLQGV
Sbjct: 210 MMALAGVFNIGDFVPSLDWLDLQGV 234
Catalyzes the 3'-hydroxylation of the flavonoid B-ring to the 3',4'-hydroxylated state. Convert naringenin to eriodictyol and dihydrokaempferol to dihydroquercetin.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: 4EC: .EC: 1EC: 3EC: .EC: 2EC: 1
>sp|P37120|C75A2_SOLME Flavonoid 3',5'-hydroxylase OS=Solanum melongena GN=CYP75A2 PE=2 SV=1 Back     alignment and function description
>sp|O04773|C75A6_CAMME Flavonoid 3',5'-hydroxylase OS=Campanula medium GN=CYP75A6 PE=2 SV=1 Back     alignment and function description
>sp|P48419|C75A3_PETHY Flavonoid 3',5'-hydroxylase 2 OS=Petunia hybrida GN=CYP75A3 PE=2 SV=1 Back     alignment and function description
>sp|O64636|C76C1_ARATH Cytochrome P450 76C1 OS=Arabidopsis thaliana GN=CYP76C1 PE=2 SV=1 Back     alignment and function description
>sp|P48418|C75A1_PETHY Flavonoid 3',5'-hydroxylase 1 OS=Petunia hybrida GN=CYP75A1 PE=2 SV=1 Back     alignment and function description
>sp|Q96418|C75A5_EUSER Flavonoid 3',5'-hydroxylase OS=Eustoma exaltatum subsp. russellianum GN=CYP75A5 PE=2 SV=1 Back     alignment and function description
>sp|Q42798|C93A1_SOYBN Cytochrome P450 93A1 OS=Glycine max GN=CYP93A1 PE=2 SV=1 Back     alignment and function description
>sp|Q96581|C75A4_GENTR Flavonoid 3',5'-hydroxylase OS=Gentiana triflora GN=CYP75A4 PE=2 SV=1 Back     alignment and function description
>sp|P93147|C81E1_GLYEC Isoflavone 2'-hydroxylase OS=Glycyrrhiza echinata GN=CYP81E1 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query267
224105525 533 cytochrome P450 [Populus trichocarpa] gi 0.988 0.495 0.503 5e-73
224071585 533 cytochrome P450 [Populus trichocarpa] gi 0.981 0.491 0.492 8e-71
255537055255 cytochrome P450, putative [Ricinus commu 0.921 0.964 0.459 9e-62
359478224 537 PREDICTED: cytochrome P450 76C1-like [Vi 0.928 0.461 0.465 3e-61
147804684 537 hypothetical protein VITISV_012452 [Viti 0.928 0.461 0.461 3e-60
224125106 523 cytochrome P450 [Populus trichocarpa] gi 0.898 0.458 0.475 5e-60
449459692 513 PREDICTED: flavonoid 3'-monooxygenase-li 0.842 0.438 0.460 2e-54
224125112 507 predicted protein [Populus trichocarpa] 0.775 0.408 0.512 9e-54
255537053 530 cytochrome P450, putative [Ricinus commu 0.756 0.381 0.490 1e-52
224131390 487 cytochrome P450 [Populus trichocarpa] gi 0.820 0.449 0.465 3e-51
>gi|224105525|ref|XP_002333806.1| cytochrome P450 [Populus trichocarpa] gi|222838666|gb|EEE77031.1| cytochrome P450 [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  280 bits (716), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 135/268 (50%), Positives = 183/268 (68%), Gaps = 4/268 (1%)

Query: 2   STSCGQASWLSNITEIGDHKISQTNIVILFSTVAVI--CFLWPFFMKVGKGNSQLPPGPR 59
           ST CG  SW     +  D++     I++L  +V ++  C     F K  +   +LPPGPR
Sbjct: 4   STICGPWSWFCKGDQ--DNEDMLLPIILLAVSVTILGTCLFQWGFKKQRETADKLPPGPR 61

Query: 60  GLPLVVYLPFLGRNLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFA 119
           GLP+V YLPFLG NLH++ M+LA+ YGPIYKL IG KL +IISSP LVKEVVRD D  FA
Sbjct: 62  GLPIVGYLPFLGPNLHQMFMELALTYGPIYKLSIGRKLCVIISSPALVKEVVRDQDITFA 121

Query: 120 NRNPTITASTLTYRASDTVFASYGSKWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIR 179
           NRNPTI A T +Y   D  F  YG +W++LRK+FV E+ S ANLDAFY+ RR+++++ + 
Sbjct: 122 NRNPTIAAKTFSYGGKDIAFQPYGPEWRMLRKIFVREMQSNANLDAFYSLRRNKVKESVN 181

Query: 180 EIYNKDSKAIDIGDIAYVTMINMVSSMLWGGTTQGEKGTSLAAEFRVEVSQALQLLARPN 239
           E Y K  K ++IG++A+ T+INM+S M WGGT + +    + +EFR   S+ +++L +PN
Sbjct: 182 ETYRKIGKPVNIGELAFSTVINMISGMFWGGTLEVDTEIDIGSEFRAAASELIEILGKPN 241

Query: 240 VSDFFPMLARFDLQGVERDSKNVLQSIE 267
           VSDFFP+LARFD+QG+ER  K   Q IE
Sbjct: 242 VSDFFPVLARFDIQGIERKMKKATQRIE 269

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224071585|ref|XP_002303528.1| cytochrome P450 [Populus trichocarpa] gi|222840960|gb|EEE78507.1| cytochrome P450 [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255537055|ref|XP_002509594.1| cytochrome P450, putative [Ricinus communis] gi|223549493|gb|EEF50981.1| cytochrome P450, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|359478224|ref|XP_003632089.1| PREDICTED: cytochrome P450 76C1-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|147804684|emb|CAN71441.1| hypothetical protein VITISV_012452 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224125106|ref|XP_002329895.1| cytochrome P450 [Populus trichocarpa] gi|222871132|gb|EEF08263.1| cytochrome P450 [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449459692|ref|XP_004147580.1| PREDICTED: flavonoid 3'-monooxygenase-like [Cucumis sativus] gi|449506129|ref|XP_004162661.1| PREDICTED: flavonoid 3'-monooxygenase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|224125112|ref|XP_002329896.1| predicted protein [Populus trichocarpa] gi|222871133|gb|EEF08264.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255537053|ref|XP_002509593.1| cytochrome P450, putative [Ricinus communis] gi|223549492|gb|EEF50980.1| cytochrome P450, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224131390|ref|XP_002328527.1| cytochrome P450 [Populus trichocarpa] gi|222838242|gb|EEE76607.1| cytochrome P450 [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query267
TAIR|locus:2139084 516 CYP706A4 ""cytochrome P450, fa 0.700 0.362 0.439 5.9e-41
TAIR|locus:2139114 518 CYP706A6 ""cytochrome P450, fa 0.700 0.361 0.423 1.6e-40
TAIR|locus:2139099 520 CYP706A5 ""cytochrome P450, fa 0.700 0.359 0.423 5.3e-40
TAIR|locus:2139129 518 CYP706A7 ""cytochrome P450, fa 0.745 0.384 0.372 1.9e-35
TAIR|locus:2152150 519 CYP706A3 ""cytochrome P450, fa 0.745 0.383 0.358 2e-33
TAIR|locus:2132614 526 CYP706A2 ""cytochrome P450, fa 0.981 0.498 0.298 6e-33
TAIR|locus:2132594 557 CYP706A1 ""cytochrome P450, fa 0.988 0.473 0.296 1.9e-31
TAIR|locus:2142878 513 TT7 "TRANSPARENT TESTA 7" [Ara 0.719 0.374 0.309 6e-22
TAIR|locus:2043699 512 CYP76C1 ""cytochrome P450, fam 0.692 0.361 0.265 7.2e-20
TAIR|locus:2043605 512 CYP76C2 ""cytochrome P450, fam 0.711 0.371 0.268 7.2e-20
TAIR|locus:2139084 CYP706A4 ""cytochrome P450, family 706, subfamily A, polypeptide 4"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 435 (158.2 bits), Expect = 5.9e-41, P = 5.9e-41
 Identities = 83/189 (43%), Positives = 129/189 (68%)

Query:    69 FLGRNLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTITAS 128
             FL  +LH    +LA  +GPI+KL +GSKL I+++SP+L +E+++D D  F+NR+  +T  
Sbjct:    57 FLDPDLHTYFANLAQSHGPIFKLNLGSKLTIVVNSPSLAREILKDQDINFSNRDVPLTGR 116

Query:   129 TLTYRASDTVFASYGSKWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNKDSKA 188
               TY   D V+  YG++W+ LRK+ V ++LS+  LD+FY  RR E+R+  R +Y +  K 
Sbjct:   117 AATYGGIDIVWTPYGAEWRQLRKICVLKLLSRKTLDSFYELRRKEVRERTRYLYEQGRKQ 176

Query:   189 --IDIGDIAYVTMINMVSSMLWGGTTQGEKGTSLAAEFRVEVSQALQLLARPNVSDFFPM 246
               + +GD  ++TM+N+  +MLWGG+ + E+  S+  EF+  +S+  +LL+ PNVSDFFP 
Sbjct:   177 SPVKVGDQLFLTMMNLTMNMLWGGSVKAEEMESVGTEFKGVISEITRLLSEPNVSDFFPW 236

Query:   247 LARFDLQGV 255
             LARFDLQG+
Sbjct:   237 LARFDLQGL 245
GO:0005506 "iron ion binding" evidence=IEA
GO:0009055 "electron carrier activity" evidence=IEA
GO:0009507 "chloroplast" evidence=ISM
GO:0016705 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen" evidence=IEA
GO:0019825 "oxygen binding" evidence=ISS
GO:0020037 "heme binding" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
TAIR|locus:2139114 CYP706A6 ""cytochrome P450, family 706, subfamily A, polypeptide 6"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2139099 CYP706A5 ""cytochrome P450, family 706, subfamily A, polypeptide 5"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2139129 CYP706A7 ""cytochrome P450, family 706, subfamily A, polypeptide 7"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2152150 CYP706A3 ""cytochrome P450, family 706, subfamily A, polypeptide 3"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2132614 CYP706A2 ""cytochrome P450, family 706, subfamily A, polypeptide 2"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2132594 CYP706A1 ""cytochrome P450, family 706, subfamily A, polypeptide 1"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2142878 TT7 "TRANSPARENT TESTA 7" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2043699 CYP76C1 ""cytochrome P450, family 76, subfamily C, polypeptide 1"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2043605 CYP76C2 ""cytochrome P450, family 76, subfamily C, polypeptide 2"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
fgenesh4_pg.C_scaffold_796000001
annotation not avaliable (511 aa)
(Populus trichocarpa)
Predicted Functional Partners:
CYP715A2-2
cytochrome P450 (359 aa)
  •     0.474
eugene3.00121060
cytochrome P450 (114 aa)
  •     0.420

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query267
PLN02687 517 PLN02687, PLN02687, flavonoid 3'-monooxygenase 5e-40
PLN03112 514 PLN03112, PLN03112, cytochrome P450 family protein 7e-31
PLN00110 504 PLN00110, PLN00110, flavonoid 3',5'-hydroxylase (F 1e-30
PLN02183 516 PLN02183, PLN02183, ferulate 5-hydroxylase 1e-27
pfam00067 461 pfam00067, p450, Cytochrome P450 3e-21
PLN03234 499 PLN03234, PLN03234, cytochrome P450 83B1; Provisio 2e-18
PLN02966 502 PLN02966, PLN02966, cytochrome P450 83A1 3e-17
PLN02394 503 PLN02394, PLN02394, trans-cinnamate 4-monooxygenas 2e-15
PLN00168 519 PLN00168, PLN00168, Cytochrome P450; Provisional 5e-14
PLN02971 543 PLN02971, PLN02971, tryptophan N-hydroxylase 7e-14
PTZ00404 482 PTZ00404, PTZ00404, cytochrome P450; Provisional 6e-10
PLN03018 534 PLN03018, PLN03018, homomethionine N-hydroxylase 1e-05
PLN02655 466 PLN02655, PLN02655, ent-kaurene oxidase 3e-04
PLN02738 633 PLN02738, PLN02738, carotene beta-ring hydroxylase 0.002
COG2124 411 COG2124, CypX, Cytochrome P450 [Secondary metaboli 0.004
>gnl|CDD|215371 PLN02687, PLN02687, flavonoid 3'-monooxygenase Back     alignment and domain information 
 Score =  144 bits (366), Expect = 5e-40
 Identities = 78/231 (33%), Positives = 117/231 (50%), Gaps = 4/231 (1%)

Query: 29  ILFSTVAVICFLWPFFMK---VGKGNSQLPPGPRGLPLVVYLPFLGRNLHRIVMDLAIVY 85
           +L  TVAV   +W   ++    GK    LPPGPRG P++  LP LG   H  +  LA  Y
Sbjct: 7   LLLGTVAVSVLVWCLLLRRGGSGKHKRPLPPGPRGWPVLGNLPQLGPKPHHTMAALAKTY 66

Query: 86  GPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTITASTLTYRASDTVFASYGSK 145
           GP+++L  G    ++ +S ++  + +R HD  F+NR P   A  + Y   D VFA YG +
Sbjct: 67  GPLFRLRFGFVDVVVAASASVAAQFLRTHDANFSNRPPNSGAEHMAYNYQDLVFAPYGPR 126

Query: 146 WQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNKD-SKAIDIGDIAYVTMINMVS 204
           W+ LRK+    + S   LD F   R +E+  ++RE+  +  +  +++G +  V   N + 
Sbjct: 127 WRALRKICAVHLFSAKALDDFRHVREEEVALLVRELARQHGTAPVNLGQLVNVCTTNALG 186

Query: 205 SMLWGGTTQGEKGTSLAAEFRVEVSQALQLLARPNVSDFFPMLARFDLQGV 255
             + G       G   A EF+  V + +QL    NV DF P L   DLQGV
Sbjct: 187 RAMVGRRVFAGDGDEKAREFKEMVVELMQLAGVFNVGDFVPALRWLDLQGV 237

Length = 517
>gnl|CDD|215583 PLN03112, PLN03112, cytochrome P450 family protein; Provisional Back     alignment and domain information
>gnl|CDD|177725 PLN00110, PLN00110, flavonoid 3',5'-hydroxylase (F3'5'H); Provisional Back     alignment and domain information
>gnl|CDD|165828 PLN02183, PLN02183, ferulate 5-hydroxylase Back     alignment and domain information
>gnl|CDD|215689 pfam00067, p450, Cytochrome P450 Back     alignment and domain information
>gnl|CDD|178773 PLN03234, PLN03234, cytochrome P450 83B1; Provisional Back     alignment and domain information
>gnl|CDD|178550 PLN02966, PLN02966, cytochrome P450 83A1 Back     alignment and domain information
>gnl|CDD|215221 PLN02394, PLN02394, trans-cinnamate 4-monooxygenase Back     alignment and domain information
>gnl|CDD|215086 PLN00168, PLN00168, Cytochrome P450; Provisional Back     alignment and domain information
>gnl|CDD|166612 PLN02971, PLN02971, tryptophan N-hydroxylase Back     alignment and domain information
>gnl|CDD|173595 PTZ00404, PTZ00404, cytochrome P450; Provisional Back     alignment and domain information
>gnl|CDD|178592 PLN03018, PLN03018, homomethionine N-hydroxylase Back     alignment and domain information
>gnl|CDD|215354 PLN02655, PLN02655, ent-kaurene oxidase Back     alignment and domain information
>gnl|CDD|215393 PLN02738, PLN02738, carotene beta-ring hydroxylase Back     alignment and domain information
>gnl|CDD|225035 COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 267
KOG0156 489 consensus Cytochrome P450 CYP2 subfamily [Secondar 100.0
PLN02687 517 flavonoid 3'-monooxygenase 99.98
PLN03112 514 cytochrome P450 family protein; Provisional 99.97
PLN00110 504 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional 99.97
PLN03234 499 cytochrome P450 83B1; Provisional 99.97
PLN02183 516 ferulate 5-hydroxylase 99.97
PLN02971 543 tryptophan N-hydroxylase 99.96
PTZ00404 482 cytochrome P450; Provisional 99.96
PLN02966 502 cytochrome P450 83A1 99.96
PLN02394 503 trans-cinnamate 4-monooxygenase 99.95
PLN02655 466 ent-kaurene oxidase 99.95
PLN00168 519 Cytochrome P450; Provisional 99.95
PLN02290 516 cytokinin trans-hydroxylase 99.95
PLN02500 490 cytochrome P450 90B1 99.94
KOG0158 499 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subf 99.94
PLN03018 534 homomethionine N-hydroxylase 99.93
KOG0157 497 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfami 99.93
PLN02196 463 abscisic acid 8'-hydroxylase 99.92
PF00067 463 p450: Cytochrome P450 p450 superfamily signature b 99.92
PLN02774 463 brassinosteroid-6-oxidase 99.92
PLN02169 500 fatty acid (omega-1)-hydroxylase/midchain alkane h 99.9
PLN03141 452 3-epi-6-deoxocathasterone 23-monooxygenase; Provis 99.9
KOG0159 519 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 99.9
PLN02302 490 ent-kaurenoic acid oxidase 99.9
PLN02738 633 carotene beta-ring hydroxylase 99.89
PLN02987 472 Cytochrome P450, family 90, subfamily A 99.89
PLN03195 516 fatty acid omega-hydroxylase; Provisional 99.89
PLN02936 489 epsilon-ring hydroxylase 99.88
PLN02648 480 allene oxide synthase 99.85
PLN02426 502 cytochrome P450, family 94, subfamily C protein 99.78
KOG0684 486 consensus Cytochrome P450 [Secondary metabolites b 99.74
COG2124 411 CypX Cytochrome P450 [Secondary metabolites biosyn 99.25
KOG0114124 consensus Predicted RNA-binding protein (RRM super 81.43
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information 
Probab=100.00  E-value=6.6e-34  Score=236.33  Aligned_cols=215  Identities=31%  Similarity=0.556  Sum_probs=185.5

Q ss_pred             CCCCCCCCCCCCCcccccccccCCc-hHHHHHHHHHHhCCeEEEEeCCEeEEEecCHHHHHHHHHhcccccCCCCC-ccc
Q 039415           49 KGNSQLPPGPRGLPLVVYLPFLGRN-LHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNP-TIT  126 (267)
Q Consensus        49 ~~~~~~~pgp~~~p~~G~~~~~~~~-~~~~~~~~~~~yG~i~~~~~~~~~~vvi~~p~~i~~il~~~~~~~~~~~~-~~~  126 (267)
                      +++.+.||||+++|++||++++... ++..+.++.++|||++.+++|..++||++|+++++|++++++..|++|+. ...
T Consensus        22 ~~~~~lPPGP~~lPiIGnl~~l~~~~~h~~~~~ls~~yGpi~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~~~~  101 (489)
T KOG0156|consen   22 RKRRNLPPGPPPLPIIGNLHQLGSLPPHRSFRKLSKKYGPVFTLRLGSVPVVVISSYEAAKEVLVKQDLEFADRPDPTAT  101 (489)
T ss_pred             cCCCCCCcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEecCceEEEECCHHHHHHHHHhCCccccCCCCchhh
Confidence            3348999999999999999999776 99999999999999999999999999999999999999999999999997 234


Q ss_pred             ccccccCCcceEeccCCcchHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhc-CCCceeHHHHHHHHHHHHHHH
Q 039415          127 ASTLTYRASDTVFASYGSKWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNK-DSKAIDIGDIAYVTMINMVSS  205 (267)
Q Consensus       127 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~-~~~~~d~~~~~~~~~~~ii~~  205 (267)
                      .+.+.+++.|++++.+|+.|+.+||+.....|+...++.....-.++++.+++.+... .++++|+.+.+..++.+||++
T Consensus       102 ~~~~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R~~E~~~l~~~l~~~~~~~~vdl~~~l~~~~~nvI~~  181 (489)
T KOG0156|consen  102 LKYLSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIREEEVDELVKKLSKSKKGEPVDLSELLDLLVGNVICR  181 (489)
T ss_pred             HHHhcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHHHHHHHHHHHHHHhcCCCceeeHHHHHHHHHHHHHHH
Confidence            4666666789999988999999999999888999999999888899999999999852 227899999999999999999


Q ss_pred             HHhcCccCCCCCchHHHHHHHHHHHHHHhhcCCcccchhc-cccccC-ccchHHHHHHHhh
Q 039415          206 MLWGGTTQGEKGTSLAAEFRVEVSQALQLLARPNVSDFFP-MLARFD-LQGVERDSKNVLQ  264 (267)
Q Consensus       206 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P-~l~~~p-~~~~~~~~~~~~~  264 (267)
                      ++||.++...+ ++...++.+.+.+.....+.+.+.+++| ++++++ ..+.++.++....
T Consensus       182 ~~fG~rf~~~~-~~~~~~~~~l~~~~~~~~~~~~~~d~~p~~l~~~~~~~g~~~~~~~~~~  241 (489)
T KOG0156|consen  182 MLFGRRFEEED-EEEFLELKELVEESLELLGSFNLSDYFPFLLRWLDGISGLEKRLKKVSK  241 (489)
T ss_pred             HHhCCccccCC-chHHHHHHHHHHHHHHHhCCccHHHHhhHHHHhcccccHHHHHHHHHHH
Confidence            99999999762 4556668899999999999888899999 677776 3345555555544

>PLN02687 flavonoid 3'-monooxygenase Back     alignment and domain information
>PLN03112 cytochrome P450 family protein; Provisional Back     alignment and domain information
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional Back     alignment and domain information
>PLN03234 cytochrome P450 83B1; Provisional Back     alignment and domain information
>PLN02183 ferulate 5-hydroxylase Back     alignment and domain information
>PLN02971 tryptophan N-hydroxylase Back     alignment and domain information
>PTZ00404 cytochrome P450; Provisional Back     alignment and domain information
>PLN02966 cytochrome P450 83A1 Back     alignment and domain information
>PLN02394 trans-cinnamate 4-monooxygenase Back     alignment and domain information
>PLN02655 ent-kaurene oxidase Back     alignment and domain information
>PLN00168 Cytochrome P450; Provisional Back     alignment and domain information
>PLN02290 cytokinin trans-hydroxylase Back     alignment and domain information
>PLN02500 cytochrome P450 90B1 Back     alignment and domain information
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PLN03018 homomethionine N-hydroxylase Back     alignment and domain information
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism] Back     alignment and domain information
>PLN02196 abscisic acid 8'-hydroxylase Back     alignment and domain information
>PF00067 p450: Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature; InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry Back     alignment and domain information
>PLN02774 brassinosteroid-6-oxidase Back     alignment and domain information
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase Back     alignment and domain information
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional Back     alignment and domain information
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PLN02302 ent-kaurenoic acid oxidase Back     alignment and domain information
>PLN02738 carotene beta-ring hydroxylase Back     alignment and domain information
>PLN02987 Cytochrome P450, family 90, subfamily A Back     alignment and domain information
>PLN03195 fatty acid omega-hydroxylase; Provisional Back     alignment and domain information
>PLN02936 epsilon-ring hydroxylase Back     alignment and domain information
>PLN02648 allene oxide synthase Back     alignment and domain information
>PLN02426 cytochrome P450, family 94, subfamily C protein Back     alignment and domain information
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>KOG0114 consensus Predicted RNA-binding protein (RRM superfamily) [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query267
3ruk_A 494 Human Cytochrome P450 Cyp17a1 In Complex With Abira 1e-06
1r9o_A 477 Crystal Structure Of P4502c9 With Flurbiprofen Boun 7e-04
1og2_A 475 Structure Of Human Cytochrome P450 Cyp2c9 Length = 8e-04
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone Length = 494 Back     alignment and structure 
Iteration: 1

 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 67/149 (44%), Gaps = 23/149 (15%)
Query: 69  FLGRN--LHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTIT 126
           FL R+  +H     L   YGPIY + +G+K  +I+    L KEV+    + F+ R    T
Sbjct: 24  FLPRHGHMHNNFFKLQKKYGPIYSVRMGTKTTVIVGHHQLAKEVLIKKGKDFSGRPQMAT 83
Query: 127 ASTLTYRASDTVFASYGSKWQILRKLFVHEVLSKANLDAFYAFRRD---EMRKIIRE--- 180
               +       FA  G+ WQ+ R+L +          A +A  +D   ++ KII +   
Sbjct: 84  LDIASNNRKGIAFADSGAHWQLHRRLAM----------ATFALFKDGDQKLEKIICQEIS 133
Query: 181 -----IYNKDSKAIDIGDIAYVTMINMVS 204
                +   + ++IDI    +V + N++S
Sbjct: 134 TLCDMLATHNGQSIDISFPVFVAVTNVIS 162
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound Length = 477 Back     alignment and structure
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9 Length = 475 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query267
3n9y_A 487 Cholesterol SIDE-chain cleavage enzyme; cytochrome 1e-34
3b98_A 475 Prostaglandin I2 synthase; prostacyclin synthase, 3e-34
3k9v_A 482 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitocho 2e-28
3dax_A 491 Cytochrome P450 7A1; cholesterol, cholesterol 7-al 2e-27
3qz1_A 496 Steroid 21-hydroxylase; P450 monooxygenase, oxidor 3e-24
3swz_A 494 Steroid 17-alpha-hydroxylase/17,20 lyase; cytochro 5e-24
2hi4_A 495 Cytochrome P450 1A2; CYP1A2, monooxygenase, drug m 1e-23
3pm0_A 507 Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase 5e-23
3b6h_A 498 Prostacyclin synthase; enzyme-inhibitor complex, C 1e-22
3tbg_A 479 Cytochrome P450 2D6; monooxygenase, thioridazine, 2e-21
3czh_A 481 Cytochrome P450 2R1; vitamin D, vitamin S 25-hydro 8e-21
1r9o_A 477 Cytochrome P450 2C9; monooxygenase, drug metaboliz 5e-18
2fdv_A 476 Cytochrome P450 2A6; CYP2A6, monooxygenase, drug m 2e-17
3e6i_A 476 CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, mono 3e-17
1po5_A 476 Cytochrome P450 2B4; oxidoreductase, membrane prot 4e-17
3s79_A 503 Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD 1e-15
3dbg_A 467 Putative cytochrome P450; cytochrome P450 oxidored 1e-13
2cib_A 455 Cytochrome P450 51; heme, heme lipid synthesis, me 5e-13
1izo_A 417 P450bsbeta, cytochrome P450 152A1; heme protein, p 1e-12
3awm_A 415 Fatty acid alpha-hydroxylase; cytochrome P450, per 1e-11
2ve3_A 444 Putative cytochrome P450 120; oxidoreductase, mono 7e-11
2ij2_A 470 Cytochrome P450 BM3; monoxygenase, heme binding pr 1e-09
3i3k_A 461 Lanosterol 14-alpha demethylase; cytochrome P450, 6e-09
3gw9_A 450 Sterol 14alpha-demethylase; CYP51, cytochrome P450 9e-09
3mdm_A 456 Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, th 3e-08
3nxu_A 485 Cytochrome P450 3A4; alpha beta protein, cytochrom 8e-05
1n97_A 389 CYP175A1; electron transport; HET: SRT HEM; 1.80A 2e-04
3dsk_A 495 Cytochrome P450 74A, chloroplast; P450 fold, fatty 4e-04
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A* Length = 487 Back     alignment and structure
 Score =  128 bits (325), Expect = 1e-34
 Identities = 35/227 (15%), Positives = 67/227 (29%), Gaps = 15/227 (6%)

Query: 53  QLPPGPRGLPLVVYLPFLGR----NLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVK 108
              P P     +    F        +H   +     YGPIY+  +G+   + +  P  V 
Sbjct: 9   NEIPSPGDNGWLNLYHFWRETGTHKVHLHHVQNFQKYGPIYREKLGNVESVYVIDPEDVA 68

Query: 109 EVVRDHDRKFANRN-PTITASTLTYRASDTVFASYGSKWQILRKLFVHEVLSKANLDAFY 167
            + +           P   A    Y+    V     + W+  R     EV++      F 
Sbjct: 69  LLFKSEGPNPERFLIPPWVAYHQYYQRPIGVLLKKSAAWKKDRVALNQEVMAPEATKNFL 128

Query: 168 AFRRDEMRKIIREIYNK------DSKAIDIGDIAYVTMINMVSSMLWGG--TTQGEKGTS 219
                  R  +  ++ +       + + DI D  +      ++++++G       E    
Sbjct: 129 PLLDAVSRDFVSVLHRRIKKAGSGNYSGDISDDLFRFAFESITNVIFGERQGMLEEVVNP 188

Query: 220 LAAEFRVEVSQALQLLARPNVSDFFPMLARFDLQGVERDSKNVLQSI 266
            A  F   + Q         + +  P L R       +D       I
Sbjct: 189 EAQRFIDAIYQMFHTSVP--MLNLPPDLFRLFRTKTWKDHVAAWDVI 233
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A* Length = 475 Back     alignment and structure
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A* Length = 482 Back     alignment and structure
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A* Length = 491 Back     alignment and structure
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus} Length = 496 Back     alignment and structure
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A* Length = 494 Back     alignment and structure
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens} Length = 495 Back     alignment and structure
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens} Length = 507 Back     alignment and structure
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A* Length = 498 Back     alignment and structure
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A* Length = 479 Back     alignment and structure
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A* Length = 481 Back     alignment and structure
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A* Length = 477 Back     alignment and structure
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A* Length = 476 Back     alignment and structure
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A* Length = 476 Back     alignment and structure
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A* Length = 476 Back     alignment and structure
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* Length = 503 Back     alignment and structure
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A* Length = 467 Back     alignment and structure
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A* Length = 455 Back     alignment and structure
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A* Length = 417 Back     alignment and structure
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A* Length = 415 Back     alignment and structure
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A* Length = 444 Back     alignment and structure
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ... Length = 470 Back     alignment and structure
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A* Length = 450 Back     alignment and structure
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* Length = 456 Back     alignment and structure
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A* Length = 485 Back     alignment and structure
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A* Length = 389 Back     alignment and structure
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A* Length = 495 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query267
3swz_A 494 Steroid 17-alpha-hydroxylase/17,20 lyase; cytochro 99.97
3pm0_A 507 Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase 99.96
2hi4_A 495 Cytochrome P450 1A2; CYP1A2, monooxygenase, drug m 99.95
3e6i_A 476 CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, mono 99.95
3qz1_A 496 Steroid 21-hydroxylase; P450 monooxygenase, oxidor 99.95
3czh_A 481 Cytochrome P450 2R1; vitamin D, vitamin S 25-hydro 99.95
3tbg_A 479 Cytochrome P450 2D6; monooxygenase, thioridazine, 99.95
1po5_A 476 Cytochrome P450 2B4; oxidoreductase, membrane prot 99.95
2fdv_A 476 Cytochrome P450 2A6; CYP2A6, monooxygenase, drug m 99.95
3k9v_A 482 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitocho 99.94
3s79_A 503 Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD 99.94
3nxu_A 485 Cytochrome P450 3A4; alpha beta protein, cytochrom 99.94
1r9o_A 477 Cytochrome P450 2C9; monooxygenase, drug metaboliz 99.94
3gw9_A 450 Sterol 14alpha-demethylase; CYP51, cytochrome P450 99.94
3ld6_A 461 Lanosterol 14-alpha demethylase; cytochrome P450, 99.93
3n9y_A 487 Cholesterol SIDE-chain cleavage enzyme; cytochrome 99.92
2ij2_A 470 Cytochrome P450 BM3; monoxygenase, heme binding pr 99.92
2ve3_A 444 Putative cytochrome P450 120; oxidoreductase, mono 99.91
3i3k_A 461 Lanosterol 14-alpha demethylase; cytochrome P450, 99.91
3dbg_A 467 Putative cytochrome P450; cytochrome P450 oxidored 99.9
2cib_A 455 Cytochrome P450 51; heme, heme lipid synthesis, me 99.9
3v8d_A 491 Cholesterol 7-alpha-monooxygenase; cytochrome, oxi 99.89
2cd8_A 436 Cytochrome P450 monooxygenase; oxidoreductase, PIK 99.88
1n97_A 389 CYP175A1; electron transport; HET: SRT HEM; 1.80A 99.86
3mdm_A 456 Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, th 99.84
3dax_A 491 Cytochrome P450 7A1; cholesterol, cholesterol 7-al 99.84
1izo_A 417 P450bsbeta, cytochrome P450 152A1; heme protein, p 99.82
3awm_A 415 Fatty acid alpha-hydroxylase; cytochrome P450, per 99.82
3b6h_A 498 Prostacyclin synthase; enzyme-inhibitor complex, C 99.81
1jfb_A 404 Nitric-oxide reductase cytochrome P450 55A1; cytoc 99.81
1ued_A 406 P450 OXYC, P450 monooxygenase; cytochrome P450 van 99.8
3dsk_A 495 Cytochrome P450 74A, chloroplast; P450 fold, fatty 99.79
2zbx_A 412 Cytochrome P450-SU1; beta prism, heme, iron, metal 99.79
1s1f_A 406 Putative cytochrome P450; cytochrome P450 oxidored 99.77
3b98_A 475 Prostaglandin I2 synthase; prostacyclin synthase, 99.76
2zwu_A 415 Camphor 5-monooxygenase; P450CAM, camphor-hydroxyl 99.76
1cpt_A 428 Cytochrome P450-TERP; oxidoreductase(oxygenase); H 99.76
3dan_A 473 Cytochrome P450 74A2; AOS heme cytochrome P450 str 99.74
3ivy_A 433 Cytochrome P450 CYP125; cholesterol, monooxygenase 99.74
3oo3_A 384 OXY protein; cytochrome P450, monooxygenase, PCD-t 99.74
3abb_A 408 CYP105D6, cytochrome P450 hydroxylase; oxidoreduct 99.73
2jjn_A 411 Cytochrome P450 113A1; oxidoreductase, iron, heme, 99.72
3aba_A 403 Cytochrome P450; oxidoreductase, heme, monooxygena 99.72
3a4g_A 411 Vitamin D hydroxylase; cytochrome P450, hemoprotei 99.71
3tyw_A 417 Putative cytochrome P450; P450 monooxygenase, oxid 99.7
1odo_A 408 Putative cytochrome P450 154A1; P450 monooxygenase 99.7
1z8o_A 404 6-deoxyerythronolide B hydroxylase; heme, CYP, ery 99.69
2wm5_A 435 CYP124, putative cytochrome P450 124; metal-bindin 99.69
2xbk_A 404 PIMD protein; epoxidation, oxidoreductase; HET: HE 99.69
3ejb_B 404 Biotin biosynthesis cytochrome P450-like enzyme; p 99.69
2y5n_A 417 MYCG, P-450-like protein; oxidoreductase, mycinami 99.69
4fb2_A 398 P450CIN; heme, monooxygenase, cindoxin, oxidoreduc 99.68
2z36_A 413 MOXA, cytochrome P450 type compactin 3'',4''- hydr 99.67
3tkt_A 450 Cytochrome P450; aromatic hydrocarbon binding of P 99.67
1gwi_A 411 CYP154C1, cytochrome P450 154C1; oxidoreductase, m 99.65
2uuq_A 414 CYP130, cytochrome P450 130; iron, heme, monooxyge 99.65
2xkr_A 398 CYP142, putative cytochrome P450 142; oxidoreducta 99.65
2dkk_A 411 Cytochrome P450; CYP158A1, INHI oxidoreductase; HE 99.64
2z3t_A 425 Cytochrome P450; monoxygenase, oxydoreductase, hem 99.64
3r9b_A 418 Cytochrome P450 164A2; monooxygenase, oxidoreducta 99.62
1q5d_A 419 P450 epoxidase; cytochrome P450, epothilone, oxydo 99.61
3mgx_A 415 Putative P450 monooxygenase; cytochrome P450 oxida 99.61
3lxh_A 421 Cytochrome P450; heme, iron, metal-binding, monoox 99.61
3nc3_A 441 Cytochrome P450 CYPX; cytochrome P450 oxidase, HAE 99.59
3oft_A 396 Cytochrome P450, CYP101C1; oxidoreductase; HET: HE 99.59
3buj_A 397 CALO2; heme, iron, metal-binding, monooxygenase, o 99.58
1lfk_A 398 OXYB, P450 monooxygenase; oxidative phenol couplin 99.57
1n40_A 396 P450 MT2, cytochrome P450 121; heme binding, oxyge 99.55
1io7_A 368 Cytochrome P450 CYP119; thermophilic, cytochromo P 99.55
3rwl_A 426 Cytochrome P450 alkane hydroxylase 1 CYP153A7; P45 99.52
2rfb_A 343 Cytochrome P450; heme, iron, metal-binding, monoox 99.5
3b4x_A 367 367AA long hypothetical cytochrome P450; HEM prote 99.48
2wiy_A 394 XPLA-heme, cytochrome P450-like protein XPLA; CYT- 99.46
3p3o_A 416 Cytochrome P450; monooxygenase, oxidoreductase; HE 99.35
4dnj_A 412 Putative cytochrome P450; oxidoreductase; HET: HEM 99.29
4dxy_A 417 Cytochrome P450, CYP101D2; cytochrome P450 mutant, 99.16
2yjn_B 381 Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; 98.35
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A* Back     alignment and structure
Probab=99.97  E-value=1.5e-29  Score=214.23  Aligned_cols=201  Identities=23%  Similarity=0.382  Sum_probs=158.4

Q ss_pred             CCCCCCCCCCCCCcccccccccC--CchHHHHHHHHHHhCCeEEEEeCCEeEEEecCHHHHHHHHHhcccccCCCCCccc
Q 039415           49 KGNSQLPPGPRGLPLVVYLPFLG--RNLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTIT  126 (267)
Q Consensus        49 ~~~~~~~pgp~~~p~~G~~~~~~--~~~~~~~~~~~~~yG~i~~~~~~~~~~vvi~~p~~i~~il~~~~~~~~~~~~~~~  126 (267)
                      +++.+.||||+++|++||+..+.  .+++..+.+|+++||+|+++++|+.++|+++||+++++++.+++..|.+++....
T Consensus         4 ~~~~~~PPgP~~lPliGnl~~l~~~~~~~~~~~~~~~kYG~i~~~~~g~~~~vvv~~p~~~k~il~~~~~~f~~rp~~~~   83 (494)
T 3swz_A            4 KTGAKYPKSLLSLPLVGSLPFLPRHGHMHNNFFKLQKKYGPIYSVRMGTKTTVIVGHHQLAKEVLIKKGKDFSGRPQMAT   83 (494)
T ss_dssp             --------CCBCCCEEEEESSCTTSSCHHHHHHHTHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTBBCCCCHH
T ss_pred             CCCCCCCCCCCCCCeEcchHHhCCCCchhHHHHHHHHHcCCEEEEEeCCCCEEEECCHHHHHHHHHhCcHhhCCCCCcHH
Confidence            34567899999999999999883  3678899999999999999999999999999999999999988888988876554


Q ss_pred             ccccccCCcceEeccCCcchHHHHHHHHHhhcCh--hhHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHHHH
Q 039415          127 ASTLTYRASDTVFASYGSKWQILRKLFVHEVLSK--ANLDAFYAFRRDEMRKIIREIYNKDSKAIDIGDIAYVTMINMVS  204 (267)
Q Consensus       127 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~--~~l~~~~~~~~~~~~~~~~~l~~~~~~~~d~~~~~~~~~~~ii~  204 (267)
                      ......++.|++++++|+.|+++||+++ +.|+.  ..++.+.+.+.++++.+++.+...+++++|+.+.+..+++|+|+
T Consensus        84 ~~~~~~~~~gl~~~~~g~~wr~~Rr~~~-~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~~~~~vd~~~~~~~~t~dvi~  162 (494)
T 3swz_A           84 LDIASNNRKGIAFADSGAHWQLHRRLAM-ATFALFKDGDQKLEKIICQEISTLCDMLATHNGQSIDISFPVFVAVTNVIS  162 (494)
T ss_dssp             HHHHTTTTCSSSSSCSSHHHHHHHHHHH-HHTTTTSSSTTCHHHHHHHHHHHHHHHHHHTTTEEECCHHHHHHHHHHHHH
T ss_pred             HHHhccCCCCeEeCCCCHHHHHHHHHHH-HHHHHhcchHHHHHHHHHHHHHHHHHHHHHcCCCcccHHHHHHHHHHHHHH
Confidence            4444444467877777999999999996 99874  45777899999999999999976556789999999999999999


Q ss_pred             HHHhcCccCCCCCchHHHHHHHHHHHHHHhhcCCcccchhccccccCc
Q 039415          205 SMLWGGTTQGEKGTSLAAEFRVEVSQALQLLARPNVSDFFPMLARFDL  252 (267)
Q Consensus       205 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~p~  252 (267)
                      .++||.+++..  ++....+.+..+.+........+.+++|+++++|.
T Consensus       163 ~~~fG~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~p~  208 (494)
T 3swz_A          163 LICFNTSYKNG--DPELNVIQNYNEGIIDNLSKDSLVDLVPWLKIFPN  208 (494)
T ss_dssp             HHHHSCCCCTT--CTHHHHHHHHHHHHHHHHCSSSSCCSSCGGGTSCC
T ss_pred             HHHcCCcCCCC--CHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCc
Confidence            99999988764  34444444444554555555556778899988883
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens} Back     alignment and structure
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens} Back     alignment and structure
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A* Back     alignment and structure
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus} Back     alignment and structure
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A* Back     alignment and structure
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A* Back     alignment and structure
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A* Back     alignment and structure
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A* Back     alignment and structure
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A* Back     alignment and structure
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* 4gl5_A* 4gl7_A* Back     alignment and structure
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A* Back     alignment and structure
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A* Back     alignment and structure
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3tik_A* 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A* Back     alignment and structure
>3ld6_A Lanosterol 14-alpha demethylase; cytochrome P450, ketoconazole, S genomics, structural genomics consortium, SGC; HET: HEM KKK BCD; 2.80A {Homo sapiens} PDB: 3juv_A* 3jus_A* Back     alignment and structure
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A* Back     alignment and structure
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ... Back     alignment and structure
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A* Back     alignment and structure
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A* Back     alignment and structure
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A* Back     alignment and structure
>3v8d_A Cholesterol 7-alpha-monooxygenase; cytochrome, oxidoreductase; HET: HEM 0GV; 1.90A {Homo sapiens} PDB: 3sn5_A* 3dax_A* Back     alignment and structure
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide monooxygenase, antibiotic biosynthesis, heme, iron, metal-binding; HET: HEM PXI; 1.7A {Streptomyces venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A* 2vz7_A* 2vsj_A* 2wi9_A* 2whw_A* Back     alignment and structure
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A* Back     alignment and structure
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* 4enh_A* 4fia_A* Back     alignment and structure
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A* Back     alignment and structure
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A* Back     alignment and structure
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A* Back     alignment and structure
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A* Back     alignment and structure
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR, atomic resolutio structural genomics/proteomics initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum} SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A* 1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A* 1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A* Back     alignment and structure
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A {Amycolatopsis orientalis} SCOP: a.104.1.1 Back     alignment and structure
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A* Back     alignment and structure
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.50A {Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A* 3cv9_A* Back     alignment and structure
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2, anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A {Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A* 2d0e_A* 1t93_A* 2d09_A* 3tzo_A* Back     alignment and structure
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A* Back     alignment and structure
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron, metal-binding, oxidoreductase, substrate-soaking, cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB: 1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A* 2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A* 1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ... Back     alignment and structure
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A {Pseudomonas SP} SCOP: a.104.1.1 Back     alignment and structure
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A* Back     alignment and structure
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron, metal-binding, oxidoreductase; HET: HEM; 1.35A {Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A* 3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A* Back     alignment and structure
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes teichomyceticus} SCOP: a.104.1.0 PDB: 3o1a_A* Back     alignment and structure
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding; HET: HEM; 2.30A {Streptomyces avermitilis} Back     alignment and structure
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase, metal-binding, AN biosynthesis, TIE-ROD mechanism of action; HET: HEM; 1.59A {Saccharopolyspora erythraea} PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A* Back     alignment and structure
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding, oxidoreductase-antibiotic complex; HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB: 3e5j_A* 3e5k_A* 3e5l_A* Back     alignment and structure
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox oxidoreductase; HET: HEM; 1.75A {Pseudonocardia autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A* Back     alignment and structure
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET: HEM; 2.90A {Streptomyces coelicolor} PDB: 4fxb_A* Back     alignment and structure
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase; HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP: a.104.1.1 Back     alignment and structure
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin, oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A* 1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A* Back     alignment and structure
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding, oxidoreductase, omega-hydroxylation, iron, heme, fatty acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium tuberculosis} PDB: 2wm4_A* Back     alignment and structure
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A {Streptomyces natalensis} PDB: 2x9p_A* Back     alignment and structure
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus subtilis} SCOP: a.104.1.0 PDB: 3ejd_B* 3eje_B* Back     alignment and structure
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis; HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB: 2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A* Back     alignment and structure
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM EDO; 1.37A {Citrobacter braakii} PDB: 4fmx_A* 4fyz_A* 1t2b_A* 3bdz_A* 3be0_A* Back     alignment and structure
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105, oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea recticatena} Back     alignment and structure
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} Back     alignment and structure
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide antibiotics, 12- and 14- carbon macrolactone monooxygenase, heme; HET: HEM; 1.92A {Streptomyces coelicolor} SCOP: a.104.1.1 Back     alignment and structure
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase, metal-binding, oxidoreductase, hypothetical protein; HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB: 2uvn_A* 2whf_A* 2wh8_A* 2wgy_A* Back     alignment and structure
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM; 1.60A {Mycobacterium tuberculosis} Back     alignment and structure
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A {Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A* Back     alignment and structure
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB: 2z3u_A* 3a1l_A* Back     alignment and structure
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12; 1.89A {Mycobacterium smegmatis} PDB: 3r9c_A* Back     alignment and structure
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A {Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A* 1pkf_A* Back     alignment and structure
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein, vancomycin biosynthes carrier protein, oxidoreductase; HET: HEM; 2.10A {Amycolatopsis balhimycina} Back     alignment and structure
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} SCOP: a.104.1.0 PDB: 3lxi_A* Back     alignment and structure
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein, oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB: 3nc5_A* 3nc6_A* 3nc7_A* Back     alignment and structure
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A {Novosphingobium aromaticivorans} PDB: 3ofu_A* Back     alignment and structure
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta binding protein; HET: HEM; 2.47A {Micromonospora echinospora} Back     alignment and structure
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450 vancomycin, oxidoreductase; HET: HEM; 1.70A {Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A* 1lgf_A* Back     alignment and structure
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450 fold, structural genomics, PSI, protein structure initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A* 3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A* Back     alignment and structure
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: HEM; 1.50A {Sulfolobus solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A* 1io9_A* 1io8_A* Back     alignment and structure
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase, oxidoreductase; HET: HEM; 2.00A {Sphingopyxis macrogoltabida} Back     alignment and structure
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus} PDB: 2rfc_A* Back     alignment and structure
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.94A {Sulfolobus tokodaii} PDB: 1ue8_A* Back     alignment and structure
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX, bioremediation, electron transport; HET: HEM; 1.49A {Rhodococcus} PDB: 2wiv_A* Back     alignment and structure
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A {Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A* Back     alignment and structure
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A {Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A* 4dnz_A* Back     alignment and structure
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent, mono-oxygenases, oxidoreductase; HET: HEM; 2.00A {Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A* Back     alignment and structure
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 267
d1r9oa_ 467 a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Huma 1e-28
d3czha1 463 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2 5e-28
d1po5a_ 465 a.104.1.1 (A:) Mammalian cytochrome p450 2b4 {Rabb 3e-26
d1tqna_ 472 a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Huma 4e-21
d2ij2a1 453 a.104.1.1 (A:3-455) Cytochrome P450 bm-3 {Bacillus 1e-19
d2ciba1 445 a.104.1.1 (A:5-449) Cytochrome p450 14 alpha-stero 8e-19
d1izoa_ 411 a.104.1.1 (A:) Cytochrome p450 152a1 (Bs-beta) {Ba 8e-13
d1n97a_ 385 a.104.1.1 (A:) Cyp175a1 {Thermus thermophilus [Tax 2e-12
d1odoa_ 401 a.104.1.1 (A:) Cyp154a1 monooxygenase {Streptomyce 2e-09
d1ueda_ 403 a.104.1.1 (A:) p450 monoxygenase OxyC {Amycolatops 1e-04
>d1r9oa_ a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Human (Homo sapiens) [TaxId: 9606]} Length = 467 Back     information, alignment and structure

class: All alpha proteins
fold: Cytochrome P450
superfamily: Cytochrome P450
family: Cytochrome P450
domain: Mammalian cytochrome p450 2c9
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  111 bits (277), Expect = 1e-28
 Identities = 38/199 (19%), Positives = 84/199 (42%), Gaps = 4/199 (2%)

Query: 54  LPPGPRGLPLVVYLPFLG-RNLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVR 112
           LPPGP  LP++  +  +G +++ + + +L+ VYGP++ L+ G K  +++     VKE + 
Sbjct: 4   LPPGPTPLPVIGNILQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALI 63

Query: 113 DHDRKFANRNPTITASTLTYRASDTVFASYGSKWQILRKLFVHEVLSKANLDAFYAFRR- 171
           D   +F+ R     A          +  S G KW+ +R+  +  + +          R  
Sbjct: 64  DLGEEFSGRGIFPLAERANR--GFGIVFSNGKKWKEIRRFSLMTLRNFGMGKRSIEDRVQ 121

Query: 172 DEMRKIIREIYNKDSKAIDIGDIAYVTMINMVSSMLWGGTTQGEKGTSLAAEFRVEVSQA 231
           +E R ++ E+    +   D   I      N++ S+++      +    L    ++  +  
Sbjct: 122 EEARCLVEELRKTKASPCDPTFILGCAPCNVICSIIFHKRFDYKDQQFLNLMEKLNENIK 181

Query: 232 LQLLARPNVSDFFPMLARF 250
           +       + + F  +  +
Sbjct: 182 ILSSPWIQICNNFSPIIDY 200
>d3czha1 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2R1 {Human (Homo sapiens) [TaxId: 9606]} Length = 463 Back     information, alignment and structure
>d1po5a_ a.104.1.1 (A:) Mammalian cytochrome p450 2b4 {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 465 Back     information, alignment and structure
>d1tqna_ a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Human (Homo sapiens) [TaxId: 9606]} Length = 472 Back     information, alignment and structure
>d2ij2a1 a.104.1.1 (A:3-455) Cytochrome P450 bm-3 {Bacillus megaterium [TaxId: 1404]} Length = 453 Back     information, alignment and structure
>d2ciba1 a.104.1.1 (A:5-449) Cytochrome p450 14 alpha-sterol demethylase (cyp51) {Mycobacterium tuberculosis [TaxId: 1773]} Length = 445 Back     information, alignment and structure
>d1izoa_ a.104.1.1 (A:) Cytochrome p450 152a1 (Bs-beta) {Bacillus subtilis [TaxId: 1423]} Length = 411 Back     information, alignment and structure
>d1n97a_ a.104.1.1 (A:) Cyp175a1 {Thermus thermophilus [TaxId: 274]} Length = 385 Back     information, alignment and structure
>d1odoa_ a.104.1.1 (A:) Cyp154a1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]} Length = 401 Back     information, alignment and structure
>d1ueda_ a.104.1.1 (A:) p450 monoxygenase OxyC {Amycolatopsis orientalis [TaxId: 31958]} Length = 403 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query267
d2ij2a1 453 Cytochrome P450 bm-3 {Bacillus megaterium [TaxId: 99.95
d1tqna_ 472 Mammalian cytochrome P450 3a4 {Human (Homo sapiens 99.94
d1r9oa_ 467 Mammalian cytochrome p450 2c9 {Human (Homo sapiens 99.92
d2ciba1 445 Cytochrome p450 14 alpha-sterol demethylase (cyp51 99.92
d3czha1 463 Vitamin D 25-hydroxylase Cyp2R1 {Human (Homo sapie 99.91
d1po5a_ 465 Mammalian cytochrome p450 2b4 {Rabbit (Oryctolagus 99.9
d1n97a_ 385 Cyp175a1 {Thermus thermophilus [TaxId: 274]} 99.83
d1izoa_ 411 Cytochrome p450 152a1 (Bs-beta) {Bacillus subtilis 99.79
d1odoa_ 401 Cyp154a1 monooxygenase {Streptomyces coelicolor [T 99.67
d1z8oa1 402 Cytochrome P450-ERYF {Saccharopolyspora erythraea 99.54
d1ueda_ 403 p450 monoxygenase OxyC {Amycolatopsis orientalis [ 99.53
d1gwia_ 403 Cyp154c1 monooxygenase {Streptomyces coelicolor [T 99.53
d1jfba_ 399 Cytochrome P450-NOR, nitric reductase {Fungus (Fus 99.46
d1s1fa_ 399 Cyp158a2 {Streptomyces coelicolor [TaxId: 1902]} 99.44
d1re9a_ 404 Cytochrome P450-CAM {Pseudomonas putida [TaxId: 30 99.32
d1q5da_ 401 Cytochrome P450epok {Sorangium cellulosum [TaxId: 99.23
d1lfka_ 394 p450 monoxygenase OxyB {Amycolatopsis orientalis [ 99.2
d1cpta_ 428 Cytochrome P450-TERP {Pseudomonas sp. [TaxId: 306] 99.17
d1io7a_ 366 Cyp119 {Archaeon Sulfolobus solfataricus [TaxId: 2 99.02
d1n40a_ 395 Cyp121 monooxygenase (P450 Mt2) {Mycobacterium tub 99.0
d1ue8a_ 367 Cyp119 {Archaeon Sulfolobus tokodaii [TaxId: 11195 98.67
>d2ij2a1 a.104.1.1 (A:3-455) Cytochrome P450 bm-3 {Bacillus megaterium [TaxId: 1404]} Back     information, alignment and structure
class: All alpha proteins
fold: Cytochrome P450
superfamily: Cytochrome P450
family: Cytochrome P450
domain: Cytochrome P450 bm-3
species: Bacillus megaterium [TaxId: 1404]

Probab=99.95  E-value=3.1e-27  Score=196.02  Aligned_cols=160  Identities=13%  Similarity=0.172  Sum_probs=135.3

Q ss_pred             CCCCCCCCCccccccccc-CCchHHHHHHHHHHhCCeEEEEeCCEeEEEecCHHHHHHHHHhcccccCCCCCcccccccc
Q 039415           53 QLPPGPRGLPLVVYLPFL-GRNLHRIVMDLAIVYGPIYKLWIGSKLYIIISSPTLVKEVVRDHDRKFANRNPTITASTLT  131 (267)
Q Consensus        53 ~~~pgp~~~p~~G~~~~~-~~~~~~~~~~~~~~yG~i~~~~~~~~~~vvi~~p~~i~~il~~~~~~~~~~~~~~~~~~~~  131 (267)
                      +.+|||+++|++||+..+ ..+++.++.+++++|||||++++|+.++|+++||+++++++.++...+..+........+.
T Consensus         1 r~iPGP~~~p~lG~l~~l~~~~~~~~~~~~~~kyG~if~~~~~~~~~vvl~~~~~i~~v~~~~~~~~~~~~~~~~~~~~~   80 (453)
T d2ij2a1           1 KEMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDESRFDKNLSQALKFVRDFA   80 (453)
T ss_dssp             CCCCCCCCCGGGTTGGGGCSSCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHTCTTTEEECCCHHHHHHHHHH
T ss_pred             CCCccCCCcchhhCHHHhCCCCHHHHHHHHHHHhCCEEEEEeCCceEEEECCHHHHHHHHhcCCcccccccHhHHHHHhc
Confidence            468999999999999988 5678999999999999999999999999999999999999976654554443332233333


Q ss_pred             cCCcceEec-cCCcchHHHHHHHHHhhcChhhHHHHHHHHHHHHHHHHHHHHhc-CCCceeHHHHHHHHHHHHHHHHHhc
Q 039415          132 YRASDTVFA-SYGSKWQILRKLFVHEVLSKANLDAFYAFRRDEMRKIIREIYNK-DSKAIDIGDIAYVTMINMVSSMLWG  209 (267)
Q Consensus       132 ~~~~~~~~~-~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~~~~~l~~~-~~~~~d~~~~~~~~~~~ii~~~~fG  209 (267)
                        |+|++++ .+|+.|+++|++++ ++|++++++.+.+.+.++++++++.|... +++++|+.+++.++++|+++.++||
T Consensus        81 --g~~~~~~~~~g~~wk~~Rk~l~-~~fs~~~l~~~~~~i~~~~~~li~~l~~~~~~~~idl~~~~~~~~~~~i~~~~fG  157 (453)
T d2ij2a1          81 --GDGLFTSWTHEKNWKKAHNILL-PSFSQQAMKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFN  157 (453)
T ss_dssp             --TTSGGGSCTTSHHHHHHHHHHG-GGGSTTTHHHHHHHHHHHHHHHHHHHHTCCTTCCEEHHHHHHHHHHHHHHHHHHS
T ss_pred             --CCcEEecCCChHHHHHHHHHHH-HHhhhhhhhhhhhhHHHHHHHHHHHhhhcCCCCccchHHHHHHHhhhcchhcccc
Confidence              3566543 35999999999997 99999999999999999999999999764 5678999999999999999999999


Q ss_pred             CccCCC
Q 039415          210 GTTQGE  215 (267)
Q Consensus       210 ~~~~~~  215 (267)
                      .+++..
T Consensus       158 ~~~~~~  163 (453)
T d2ij2a1         158 YRFNSF  163 (453)
T ss_dssp             CCCCGG
T ss_pred             cccchh
Confidence            988643
>d1tqna_ a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1r9oa_ a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2ciba1 a.104.1.1 (A:5-449) Cytochrome p450 14 alpha-sterol demethylase (cyp51) {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d3czha1 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2R1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1po5a_ a.104.1.1 (A:) Mammalian cytochrome p450 2b4 {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d1n97a_ a.104.1.1 (A:) Cyp175a1 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1izoa_ a.104.1.1 (A:) Cytochrome p450 152a1 (Bs-beta) {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1odoa_ a.104.1.1 (A:) Cyp154a1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1z8oa1 a.104.1.1 (A:3-404) Cytochrome P450-ERYF {Saccharopolyspora erythraea [TaxId: 1836]} Back     information, alignment and structure
>d1ueda_ a.104.1.1 (A:) p450 monoxygenase OxyC {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure
>d1gwia_ a.104.1.1 (A:) Cyp154c1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1jfba_ a.104.1.1 (A:) Cytochrome P450-NOR, nitric reductase {Fungus (Fusarium oxysporum) [TaxId: 5507]} Back     information, alignment and structure
>d1s1fa_ a.104.1.1 (A:) Cyp158a2 {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1re9a_ a.104.1.1 (A:) Cytochrome P450-CAM {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1q5da_ a.104.1.1 (A:) Cytochrome P450epok {Sorangium cellulosum [TaxId: 56]} Back     information, alignment and structure
>d1lfka_ a.104.1.1 (A:) p450 monoxygenase OxyB {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure
>d1cpta_ a.104.1.1 (A:) Cytochrome P450-TERP {Pseudomonas sp. [TaxId: 306]} Back     information, alignment and structure
>d1io7a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Back     information, alignment and structure
>d1n40a_ a.104.1.1 (A:) Cyp121 monooxygenase (P450 Mt2) {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1ue8a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus tokodaii [TaxId: 111955]} Back     information, alignment and structure