Citrus Sinensis ID: 039417

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160----
Protein Sequence
MANASKLFVFSFLMASIMGSMASARPLSNPNCWDSLIQIQACSGEIILFFLNGETYLGDGCCNAIRTIRKKCWPNMIDTLGFTAEEGDVLEGYCDHETPAAIVHTQPAPIPVETNSGMIGYTFIIIIVIVLLIIDLTYLYRCLAPNRNLNYRSWRRLISNTARS
Secondary Structure (PSIPRED)
ccccHHHHHHHHHHHHHHHccccccccccHHHHHHHHcccccHHHHHHHHHHccccccHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHccc
Secondary Structure Prediction (SSPRO)
cccccHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHcHccHHHHHHHccccccccHHHccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHcccc
Coil and Loop (DISEMBL)
MANASKLFVFSFLMASIMGsmasarplsnpncwdSLIQIQACSGEIILFFLngetylgdgcCNAIRTIRKkcwpnmidtlgftaeegdvlegycdhetpaaivhtqpapipvetnsgmigyTFIIIIVIVLLIIDLTYLYrclapnrnlnyRSWRRLISNTARS
Flexible Loop (DISEMBL)
MANASKLFVFSFLMASIMGSMASARPLSNPNCWDSLIQIQACSGEIILFFLNGETYLGDGCCNAIRTIRKKCWPNMIDTLGFTAEEGDVLEGYCDHETPAAIVHTQPAPIPVETNSGMIGYTFIIIIVIVLLIIDLTYLYRCLapnrnlnyrswRRLISNTARS
Low Complexity Region (SEG)
MANASKLFVFSFLMASIMGSMASARPLSNPNCWDSLIQIQACSGEIILFFLNGETYLGDGCCNAIRTIRKKCWPNMIDTLGFTAEEGDVLEGYCDHETPAAIVHTQPAPIPVETNSGMIGYTFiiiivivlliiDLTYLYRCLAPNRNLNYRSWRRLISNTARS
Disordered region (IsUnstruct)
******LFVFSFLMASIMGSMASARPLSNPNCWDSLIQIQACSGEIILFFLNGETYLGDGCCNAIRTIRKKCWPNMIDTLGFTAEEGDVLEGYCDHETPAAIVHTQPAPIPVETNSGMIGYTFIIIIVIVLLIIDLTYLYRCLAPNRNLNYRSWRRLI******
Disordered Region (DISOPRED)
****SKLFVFSFLMAS***************CWDSLIQIQACSGEIILFFLNGETYLGDGCCNAIRTIRKKCWPNMIDTLGFTAEEGDVLEGYC************************IGYTFIIIIVIVLLIIDLTYLYRCLAPNRNLNYRSWRRLISN****
Disordered Region (DISEMBL)
MANASKLFVFSFLMASIMGSMASARPLSNPNCWDSLIQIQACSGEIILFFLNGETYLGDGCCNAIRTIRKKCWPNMIDTLGFTAEEGDVLEGYCDHETPAAIVHTQPAPIPVETNSGMIGYTFIIIIVIVLLIIDLTYLYRCLAPNRNLNYRSWRRLISNTARS
Disordered Region (DISPRO)
***ASKLFVFSFLMASIMGSMASARPLSNPNCWDSLIQIQACSGEIILFFLNGETYLGDGCCNAIRTIRKKCWPNMIDTLGFTAEEGDVLEGYCDH**************PVETNSGMIGYTFIIIIVIVLLIIDLTYLYRCLAPNRNLNYRSWRRLIS*****
Transmembrane Helix (TMHMM)
iiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MANASKLFVFSFLMASIMGSMASARPLSNPNCWDSLIQIQACSGEIILFFLNGETYLGDGCCNAIRTIRKKCWPNMIDTLGFTAEEGDVLEGYCDHETPAAIVHTQPAPIPVETNSGMIGYTFIIIIVIVLLIIDLTYLYRCLAPNRNLNYRSWRRLISNTARS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	164	2.2.26 [Sep-21-2011]
Q9SRD8	158	Egg cell-secreted protein	yes	no	0.506	0.525	0.542	2e-27
Q9SJ23	125	Egg cell-secreted protein	no	no	0.487	0.64	0.493	2e-19
Q9T039	127	Egg cell-secreted protein	no	no	0.469	0.606	0.462	6e-18
Q9SJ24	125	Egg cell-secreted protein	no	no	0.396	0.52	0.507	1e-16
Q9FGG1	155	Egg cell-secreted protein	no	no	0.481	0.509	0.333	7e-09

>sp|Q9SRD8|EC11_ARATH Egg cell-secreted protein 1.1 OS=Arabidopsis thaliana GN=EC1.1 PE=2 SV=1

 Score =  121 bits (304), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 57/105 (54%), Positives = 69/105 (65%), Gaps = 22/105 (20%)

Query: 13  LMASIMGSMASARPLSNPN----------------------CWDSLIQIQACSGEIILFF 50
           LM  +  S  +ARPL  P+                      CWDSL+Q+Q CSGE+ILFF
Sbjct: 16  LMLMVASSTVTARPLMKPSMGTSSPTTSLVYRLKLDEDTGYCWDSLMQLQHCSGELILFF 75

Query: 51  LNGETYLGDGCCNAIRTIRKKCWPNMIDTLGFTAEEGDVLEGYCD 95
           LNGETY+G GCC+AIRTI +KCWP MI  LGFTA+EGD+L+GYCD
Sbjct: 76  LNGETYIGPGCCSAIRTIGRKCWPTMIGVLGFTAQEGDMLQGYCD 120

Involved in the regulation of gamete interactions during the double fertilization and to prevent multiple-pollen tube attraction; mediates the redistribution of the gamete fusogen HAP2/GCS1 to the cell surface after secretion upon sperm arrival.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9SJ23|EC13_ARATH Egg cell-secreted protein 1.3 OS=Arabidopsis thaliana GN=EC1.3 PE=2 SV=1

 Score = 95.1 bits (235), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 41/83 (49%), Positives = 55/83 (66%), Gaps = 3/83 (3%)

Query: 31  NCWDSLIQIQACSGEIILFFLNGETYLGDGCCNAIRTIRKKCWPNMIDTLGFTAEEGDVL 90
            CWD+L ++++C+ EI+LFFLNGET LG GCCNA+  I   CWP M+ +LGFT EE +VL
Sbjct: 45  QCWDALYELKSCTNEIVLFFLNGETKLGYGCCNAVDVITTDCWPAMLTSLGFTLEETNVL 104

Query: 91  EGYCDHETPAAIVHTQPAPIPVE 113
            G+C          + PA  PV+
Sbjct: 105 RGFCQSPNSGG---SSPALSPVK 124

Involved in the regulation of gamete interactions during the double fertilization and to prevent multiple-pollen tube attraction; mediates the redistribution of the gamete fusogen HAP2/GCS1 to the cell surface after secretion upon sperm arrival.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9T039|EC14_ARATH Egg cell-secreted protein 1.4 OS=Arabidopsis thaliana GN=EC1.4 PE=2 SV=1

 Score = 90.1 bits (222), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 37/80 (46%), Positives = 53/80 (66%), Gaps = 3/80 (3%)

Query: 32  CWDSLIQIQACSGEIILFFLNGETYLGDGCCNAIRTIRKKCWPNMIDTLGFTAEEGDVLE 91
           CW++L ++++C+ EI+LFFLNGET LG  CC ++  I   CWP M+ +LGFT EE +VL 
Sbjct: 48  CWNALYELKSCTNEIVLFFLNGETKLGVSCCESVDIITTNCWPAMLTSLGFTPEEANVLR 107

Query: 92  GYCDHETPAAIVHTQPAPIP 111
           G+C +        + PAP P
Sbjct: 108 GFCQNPNSG---DSSPAPSP 124

Involved in the regulation of gamete interactions during the double fertilization and to prevent multiple-pollen tube attraction; mediates the redistribution of the gamete fusogen HAP2/GCS1 to the cell surface after secretion upon sperm arrival.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SJ24|EC12_ARATH Egg cell-secreted protein 1.2 OS=Arabidopsis thaliana GN=EC1.2 PE=2 SV=1

 Score = 85.5 bits (210), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 33/65 (50%), Positives = 48/65 (73%)

Query: 32  CWDSLIQIQACSGEIILFFLNGETYLGDGCCNAIRTIRKKCWPNMIDTLGFTAEEGDVLE 91
           CW++L ++++C+ EI+LFFLNGET LG  CC A+  I   CWP M+ +LGFT++E +VL 
Sbjct: 46  CWNALYELKSCTNEIVLFFLNGETKLGVDCCQAVEVITTDCWPAMLTSLGFTSDETNVLR 105

Query: 92  GYCDH 96
           G+C  
Sbjct: 106 GFCQS 110

Involved in the regulation of gamete interactions during the double fertilization and to prevent multiple-pollen tube attraction; mediates the redistribution of the gamete fusogen HAP2/GCS1 to the cell surface after secretion upon sperm arrival.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FGG1|EC15_ARATH Egg cell-secreted protein 1.5 OS=Arabidopsis thaliana GN=EC1.5 PE=2 SV=1

 Score = 59.7 bits (143), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 8/87 (9%)

Query: 31  NCWDSLIQIQACSGEIILFFLN----GETYLGDG----CCNAIRTIRKKCWPNMIDTLGF 82
           +CW++ +++++C+ EI+ FFL+     E  +  G    CC AI  + K CW  M  +LG 
Sbjct: 52  DCWNAGLELKSCTDEIVKFFLSQTGTSEPPVKGGIDKDCCGAIGLVVKDCWSVMFTSLGL 111

Query: 83  TAEEGDVLEGYCDHETPAAIVHTQPAP 109
           T  EG+ L  YC+ +   + +   PAP
Sbjct: 112 TTMEGNNLREYCEFQAEKSELSPSPAP 138

Involved in the regulation of gamete interactions during the double fertilization and to prevent multiple-pollen tube attraction; mediates the redistribution of the gamete fusogen HAP2/GCS1 to the cell surface after secretion upon sperm arrival.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	164
255557431	135	conserved hypothetical protein [Ricinus	0.591	0.718	0.616	6e-28
255566628	141	conserved hypothetical protein [Ricinus	0.585	0.680	0.566	8e-28
224116762	87	predicted protein [Populus trichocarpa]	0.420	0.793	0.782	7e-26
15223149	158	uncharacterized protein [Arabidopsis tha	0.506	0.525	0.542	9e-26
297839547	158	hypothetical protein ARALYDRAFT_476835 [	0.530	0.550	0.513	3e-25
357459299	145	hypothetical protein MTR_3g049180 [Medic	0.585	0.662	0.491	2e-24
224103865	76	predicted protein [Populus trichocarpa]	0.420	0.907	0.739	5e-24
356574547	141	PREDICTED: uncharacterized protein LOC10	0.426	0.496	0.671	1e-23
224096932	76	predicted protein [Populus trichocarpa]	0.451	0.973	0.653	4e-23
357459319	128	hypothetical protein MTR_3g049320 [Medic	0.634	0.812	0.483	4e-21

>gi|255557431|ref|XP_002519746.1| conserved hypothetical protein [Ricinus communis] gi|223541163|gb|EEF42719.1| conserved hypothetical protein [Ricinus communis]

 Score =  128 bits (322), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 66/107 (61%), Positives = 80/107 (74%), Gaps = 10/107 (9%)

Query: 1   MANASKLFVF-SFLMASIMG-SMASARPLS--------NPNCWDSLIQIQACSGEIILFF 50
           MA + KL VF +FL AS+   +MAS   L+        + NCWDSLIQ++AC+ EIILFF
Sbjct: 1   MACSLKLVVFIAFLAASLNNEAMASGSNLAARLKLDEESSNCWDSLIQLEACTTEIILFF 60

Query: 51  LNGETYLGDGCCNAIRTIRKKCWPNMIDTLGFTAEEGDVLEGYCDHE 97
           LNGET+LG GCC AIRTI ++CWPN+IDTLGFT EEGD+LEGYC  E
Sbjct: 61  LNGETHLGHGCCQAIRTISEQCWPNLIDTLGFTTEEGDILEGYCIKE 107

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255566628|ref|XP_002524298.1| conserved hypothetical protein [Ricinus communis] gi|223536389|gb|EEF38038.1| conserved hypothetical protein [Ricinus communis]

 Score =  128 bits (322), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 64/113 (56%), Positives = 75/113 (66%), Gaps = 17/113 (15%)

Query: 1   MANASKLFVFSFLMASIMGSM-ASARPLS-NP---------------NCWDSLIQIQACS 43
           MA  S L V   +++     + A ARPLS +P               +CWDSL+Q+QAC+
Sbjct: 1   MARTSTLIVLIVVLSYFTTELTAKARPLSLSPTLLARLKLDEEASSISCWDSLVQLQACT 60

Query: 44  GEIILFFLNGETYLGDGCCNAIRTIRKKCWPNMIDTLGFTAEEGDVLEGYCDH 96
           GEIILFFLNGETYLG  CC AIR I K+CWP MIDTLGFT EEGD+LEGYCD 
Sbjct: 61  GEIILFFLNGETYLGHSCCEAIRIITKQCWPTMIDTLGFTTEEGDILEGYCDK 113

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224116762|ref|XP_002331871.1| predicted protein [Populus trichocarpa] gi|222875389|gb|EEF12520.1| predicted protein [Populus trichocarpa]

 Score =  122 bits (305), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 54/69 (78%), Positives = 59/69 (85%)

Query: 28 SNPNCWDSLIQIQACSGEIILFFLNGETYLGDGCCNAIRTIRKKCWPNMIDTLGFTAEEG 87
          S  NCWDSL+Q+QACSGEIILFFLNGET LG  CC A+RTI + CWPNMIDTLGFTAEEG
Sbjct: 6  SQNNCWDSLVQLQACSGEIILFFLNGETQLGRSCCQALRTIGEHCWPNMIDTLGFTAEEG 65

Query: 88 DVLEGYCDH 96
           +LEGYCD 
Sbjct: 66 QILEGYCDK 74

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15223149|ref|NP_177801.1| uncharacterized protein [Arabidopsis thaliana] gi|75207334|sp|Q9SRD8.1|EC11_ARATH RecName: Full=Egg cell-secreted protein 1.1; Flags: Precursor gi|6143892|gb|AAF04438.1|AC010718_7 hypothetical protein; 47879-48355 [Arabidopsis thaliana] gi|52354237|gb|AAU44439.1| hypothetical protein AT1G76750 [Arabidopsis thaliana] gi|55740537|gb|AAV63861.1| hypothetical protein At1g76750 [Arabidopsis thaliana] gi|332197764|gb|AEE35885.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  121 bits (304), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 57/105 (54%), Positives = 69/105 (65%), Gaps = 22/105 (20%)

Query: 13  LMASIMGSMASARPLSNPN----------------------CWDSLIQIQACSGEIILFF 50
           LM  +  S  +ARPL  P+                      CWDSL+Q+Q CSGE+ILFF
Sbjct: 16  LMLMVASSTVTARPLMKPSMGTSSPTTSLVYRLKLDEDTGYCWDSLMQLQHCSGELILFF 75

Query: 51  LNGETYLGDGCCNAIRTIRKKCWPNMIDTLGFTAEEGDVLEGYCD 95
           LNGETY+G GCC+AIRTI +KCWP MI  LGFTA+EGD+L+GYCD
Sbjct: 76  LNGETYIGPGCCSAIRTIGRKCWPTMIGVLGFTAQEGDMLQGYCD 120

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297839547|ref|XP_002887655.1| hypothetical protein ARALYDRAFT_476835 [Arabidopsis lyrata subsp. lyrata] gi|297333496|gb|EFH63914.1| hypothetical protein ARALYDRAFT_476835 [Arabidopsis lyrata subsp. lyrata]

 Score =  119 bits (299), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 56/109 (51%), Positives = 71/109 (65%), Gaps = 22/109 (20%)

Query: 9   VFSFLMASIMGSMASARPLSNPN----------------------CWDSLIQIQACSGEI 46
           V + ++  +  S  +ARPL  P+                      CWDSL+Q+Q CSGE+
Sbjct: 13  VVTLVLMVVSSSTVTARPLMKPSMGSSSPTSSLVYRLRLDEDTGYCWDSLMQLQHCSGEL 72

Query: 47  ILFFLNGETYLGDGCCNAIRTIRKKCWPNMIDTLGFTAEEGDVLEGYCD 95
           ILFFLNGETY+G GCC+AIRTI +KCWP MI  LGFTA+EGD+L+GYCD
Sbjct: 73  ILFFLNGETYIGPGCCSAIRTIGRKCWPTMIGVLGFTAQEGDMLQGYCD 121

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357459299|ref|XP_003599930.1| hypothetical protein MTR_3g049180 [Medicago truncatula] gi|357459309|ref|XP_003599935.1| hypothetical protein MTR_3g049270 [Medicago truncatula] gi|355488978|gb|AES70181.1| hypothetical protein MTR_3g049180 [Medicago truncatula] gi|355488983|gb|AES70186.1| hypothetical protein MTR_3g049270 [Medicago truncatula]

 Score =  117 bits (292), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 59/120 (49%), Positives = 73/120 (60%), Gaps = 24/120 (20%)

Query: 1   MANASKLFVFS-----FLMASIMGSMASARPLSNPN-------------------CWDSL 36
           MA++ K+FV       F+  +   S+  +R LSNPN                   CW+SL
Sbjct: 1   MASSHKIFVLVALALVFIALNSSTSIVESRKLSNPNSNLMSLEARLKVSGDEPSNCWESL 60

Query: 37  IQIQACSGEIILFFLNGETYLGDGCCNAIRTIRKKCWPNMIDTLGFTAEEGDVLEGYCDH 96
            ++QACSGEII FFLNGETYLG GCC AIR I   CWPN++ +LGFT EE D+LEGYCD 
Sbjct: 61  FKLQACSGEIITFFLNGETYLGYGCCKAIRVIGHDCWPNVVASLGFTNEETDLLEGYCDQ 120

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224103865|ref|XP_002313224.1| predicted protein [Populus trichocarpa] gi|222849632|gb|EEE87179.1| predicted protein [Populus trichocarpa]

 Score =  115 bits (289), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 51/69 (73%), Positives = 57/69 (82%)

Query: 32  CWDSLIQIQACSGEIILFFLNGETYLGDGCCNAIRTIRKKCWPNMIDTLGFTAEEGDVLE 91
           CWDSLIQ+QAC+GEIILFFLNGET LG  CC A+ TI + CWPNMIDTLGFT EEG +LE
Sbjct: 1   CWDSLIQLQACTGEIILFFLNGETQLGHSCCQALHTIGEHCWPNMIDTLGFTTEEGQILE 60

Query: 92  GYCDHETPA 100
           GYCD  T +
Sbjct: 61  GYCDKATDS 69

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356574547|ref|XP_003555407.1| PREDICTED: uncharacterized protein LOC100801164 [Glycine max]

 Score =  114 bits (286), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 47/70 (67%), Positives = 56/70 (80%)

Query: 28  SNPNCWDSLIQIQACSGEIILFFLNGETYLGDGCCNAIRTIRKKCWPNMIDTLGFTAEEG 87
            + NCWDSL ++QAC+GE+I FFLNGETYLG  CC AIR +   CWP+MI +LGFT EEG
Sbjct: 42  ESSNCWDSLFELQACTGEVITFFLNGETYLGPSCCQAIRIVGHDCWPDMIASLGFTTEEG 101

Query: 88  DVLEGYCDHE 97
           DVL+GYCD E
Sbjct: 102 DVLQGYCDSE 111

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224096932|ref|XP_002334656.1| predicted protein [Populus trichocarpa] gi|222874068|gb|EEF11199.1| predicted protein [Populus trichocarpa]

 Score =  112 bits (281), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 51/78 (65%), Positives = 59/78 (75%), Gaps = 4/78 (5%)

Query: 32  CWDSLIQIQACSGEIILFFLNGETYLGDGCCNAIRTIRKKCWPNMIDTLGFTAEEGDVLE 91
           CWDSL+Q+QAC+GEI+LFFLNGET LG  CC A+ TI + CWPNMIDTLGFT EE  +LE
Sbjct: 1   CWDSLLQLQACTGEIVLFFLNGETQLGHSCCQALSTIGEHCWPNMIDTLGFTTEESQILE 60

Query: 92  GYCDHETPAAIVHTQPAP 109
           GYCD     A   T P+P
Sbjct: 61  GYCD----KAADPTTPSP 74

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357459319|ref|XP_003599940.1| hypothetical protein MTR_3g049320 [Medicago truncatula] gi|355488988|gb|AES70191.1| hypothetical protein MTR_3g049320 [Medicago truncatula]

 Score =  105 bits (263), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 57/118 (48%), Positives = 74/118 (62%), Gaps = 14/118 (11%)

Query: 1   MANASKLFVFS-----FLMASIMGSMASARPLSNPNCWDSLIQIQA----CSGEIILFFL 51
           MA++ K+FV       F+  +   S+  +R LSNPN   +L+ ++A      GEI+ FFL
Sbjct: 1   MASSHKIFVLVALALVFIALNSSTSIVESRKLSNPN--SNLMSLEARLKHVVGEIVTFFL 58

Query: 52  NGETYLGDGCCNAIRTIRKKCWPNMIDTLGFTAEEGDVLEGYCDHETPAAIVHTQPAP 109
           NGETYLG GCC AIR I   CWPN++ +LGFT EE DVLEGYCD       VH+ P+P
Sbjct: 59  NGETYLGYGCCKAIRVIGHDCWPNVVASLGFTNEETDVLEGYCDQ---VEDVHSPPSP 113

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	164
TAIR|locus:2030136	158	EC1.1 "AT1G76750" [Arabidopsis	0.390	0.405	0.765	4.7e-29
TAIR|locus:2052556	125	EC1.3 "AT2G21750" [Arabidopsis	0.481	0.632	0.5	2.5e-19
TAIR|locus:2136293	127	EC1.4 "AT4G39340" [Arabidopsis	0.469	0.606	0.462	4.6e-18
TAIR|locus:2052536	125	EC1.2 "AT2G21740" [Arabidopsis	0.481	0.632	0.451	9.5e-18
TAIR|locus:2176080	155	EC1.5 "AT5G64720" [Arabidopsis	0.481	0.509	0.333	6.6e-10
TAIR|locus:504955408	120	AT4G35165 "AT4G35165" [Arabido	0.432	0.591	0.32	2.1e-06
TAIR|locus:4010713622	120	AT2G14378 [Arabidopsis thalian	0.432	0.591	0.306	5.5e-06
TAIR|locus:504955577	119	AT3G48675 "AT3G48675" [Arabido	0.542	0.747	0.273	7e-06
TAIR|locus:504954846	120	AT5G52965 "AT5G52965" [Arabido	0.371	0.508	0.290	2.4e-05
TAIR|locus:505006689	121	AT5G52975 "AT5G52975" [Arabido	0.371	0.504	0.290	3.9e-05

TAIR|locus:2030136 EC1.1 "AT1G76750" [Arabidopsis thaliana (taxid:3702)]

 Score = 297 (109.6 bits), Expect = 4.7e-29, Sum P(2) = 4.7e-29
 Identities = 49/64 (76%), Positives = 58/64 (90%)

Query:    32 CWDSLIQIQACSGEIILFFLNGETYLGDGCCNAIRTIRKKCWPNMIDTLGFTAEEGDVLE 91
             CWDSL+Q+Q CSGE+ILFFLNGETY+G GCC+AIRTI +KCWP MI  LGFTA+EGD+L+
Sbjct:    57 CWDSLMQLQHCSGELILFFLNGETYIGPGCCSAIRTIGRKCWPTMIGVLGFTAQEGDMLQ 116

Query:    92 GYCD 95
             GYCD
Sbjct:   117 GYCD 120

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IDA

GO:0005622 "intracellular" evidence=IDA

GO:0009567 "double fertilization forming a zygote and endosperm" evidence=IGI

GO:0031982 "vesicle" evidence=IDA

GO:0048240 "sperm capacitation" evidence=IDA

GO:0080155 "regulation of double fertilization forming a zygote and endosperm" evidence=IMP

GO:2000008 "regulation of protein localization to cell surface" evidence=IMP

TAIR|locus:2052556 EC1.3 "AT2G21750" [Arabidopsis thaliana (taxid:3702)]

 Score = 231 (86.4 bits), Expect = 2.5e-19, P = 2.5e-19
 Identities = 41/82 (50%), Positives = 55/82 (67%)

Query:    32 CWDSLIQIQACSGEIILFFLNGETYLGDGCCNAIRTIRKKCWPNMIDTLGFTAEEGDVLE 91
             CWD+L ++++C+ EI+LFFLNGET LG GCCNA+  I   CWP M+ +LGFT EE +VL 
Sbjct:    46 CWDALYELKSCTNEIVLFFLNGETKLGYGCCNAVDVITTDCWPAMLTSLGFTLEETNVLR 105

Query:    92 GYCDHETPAAIVHTQPAPIPVE 113
             G+C          + PA  PV+
Sbjct:   106 GFCQSPNSGG---SSPALSPVK 124

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IDA

GO:0009567 "double fertilization forming a zygote and endosperm" evidence=IGI

GO:0031982 "vesicle" evidence=IDA

GO:0080155 "regulation of double fertilization forming a zygote and endosperm" evidence=IMP

GO:2000008 "regulation of protein localization to cell surface" evidence=IMP

TAIR|locus:2136293 EC1.4 "AT4G39340" [Arabidopsis thaliana (taxid:3702)]

 Score = 219 (82.2 bits), Expect = 4.6e-18, P = 4.6e-18
 Identities = 37/80 (46%), Positives = 53/80 (66%)

Query:    32 CWDSLIQIQACSGEIILFFLNGETYLGDGCCNAIRTIRKKCWPNMIDTLGFTAEEGDVLE 91
             CW++L ++++C+ EI+LFFLNGET LG  CC ++  I   CWP M+ +LGFT EE +VL 
Sbjct:    48 CWNALYELKSCTNEIVLFFLNGETKLGVSCCESVDIITTNCWPAMLTSLGFTPEEANVLR 107

Query:    92 GYCDHETPAAIVHTQPAPIP 111
             G+C +        + PAP P
Sbjct:   108 GFCQNPNSG---DSSPAPSP 124

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IDA

GO:0009567 "double fertilization forming a zygote and endosperm" evidence=IGI

GO:0031982 "vesicle" evidence=IDA

GO:0080155 "regulation of double fertilization forming a zygote and endosperm" evidence=IMP

GO:2000008 "regulation of protein localization to cell surface" evidence=IMP

TAIR|locus:2052536 EC1.2 "AT2G21740" [Arabidopsis thaliana (taxid:3702)]

 Score = 216 (81.1 bits), Expect = 9.5e-18, P = 9.5e-18
 Identities = 37/82 (45%), Positives = 54/82 (65%)

Query:    32 CWDSLIQIQACSGEIILFFLNGETYLGDGCCNAIRTIRKKCWPNMIDTLGFTAEEGDVLE 91
             CW++L ++++C+ EI+LFFLNGET LG  CC A+  I   CWP M+ +LGFT++E +VL 
Sbjct:    46 CWNALYELKSCTNEIVLFFLNGETKLGVDCCQAVEVITTDCWPAMLTSLGFTSDETNVLR 105

Query:    92 GYCDHETPAAIVHTQPAPIPVE 113
             G+C          + PAP  V+
Sbjct:   106 GFCQSPNSGG---SSPAPSSVK 124

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IDA

GO:0009567 "double fertilization forming a zygote and endosperm" evidence=IGI

GO:0031982 "vesicle" evidence=IDA

GO:0080155 "regulation of double fertilization forming a zygote and endosperm" evidence=IMP

GO:2000008 "regulation of protein localization to cell surface" evidence=IMP

TAIR|locus:2176080 EC1.5 "AT5G64720" [Arabidopsis thaliana (taxid:3702)]

 Score = 142 (55.0 bits), Expect = 6.6e-10, P = 6.6e-10
 Identities = 29/87 (33%), Positives = 48/87 (55%)

Query:    31 NCWDSLIQIQACSGEIILFFLN----GETYLGDG----CCNAIRTIRKKCWPNMIDTLGF 82
             +CW++ +++++C+ EI+ FFL+     E  +  G    CC AI  + K CW  M  +LG 
Sbjct:    52 DCWNAGLELKSCTDEIVKFFLSQTGTSEPPVKGGIDKDCCGAIGLVVKDCWSVMFTSLGL 111

Query:    83 TAEEGDVLEGYCDHETPAAIVHTQPAP 109
             T  EG+ L  YC+ +   + +   PAP
Sbjct:   112 TTMEGNNLREYCEFQAEKSELSPSPAP 138

GO:0003674 "molecular_function" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0005576 "extracellular region" evidence=IDA

GO:0009567 "double fertilization forming a zygote and endosperm" evidence=IGI

GO:0031982 "vesicle" evidence=IDA

GO:0080155 "regulation of double fertilization forming a zygote and endosperm" evidence=IMP

GO:2000008 "regulation of protein localization to cell surface" evidence=IMP

TAIR|locus:504955408 AT4G35165 "AT4G35165" [Arabidopsis thaliana (taxid:3702)]

 Score = 109 (43.4 bits), Expect = 2.1e-06, P = 2.1e-06
 Identities = 24/75 (32%), Positives = 34/75 (45%)

Query:    26 PLSNPNCWDSLIQIQACSGEIILFFLNGET-YLGDGCCNAIRTIRKKCWPNMIDTLGFTA 84
             P+    CW SL   Q C  E++    +G+   +G  CC A+ TI   CWP+M     F  
Sbjct:    44 PIDVEKCWASLFNTQGCVFELLKSVFSGQFGNVGVACCKALSTIDANCWPHMFPLNPFFP 103

Query:    85 EEGDVLEGYCDHETP 99
                 +L+  C H  P
Sbjct:   104 P---LLKDNCAHIVP 115

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:4010713622 AT2G14378 [Arabidopsis thaliana (taxid:3702)]

 Score = 105 (42.0 bits), Expect = 5.5e-06, P = 5.5e-06
 Identities = 23/75 (30%), Positives = 32/75 (42%)

Query:    26 PLSNPNCWDSLIQIQACSGEIILFFLNGETY-LGDGCCNAIRTIRKKCWPNMIDTLGFTA 84
             P+    CW SL   Q C  E++    +G    +G  CC A  T+   CWP+M     F  
Sbjct:    44 PIDVEKCWSSLFNTQGCVFELLKSVFSGRFGDVGVACCKAFSTVDANCWPHMFPLNPFFP 103

Query:    85 EEGDVLEGYCDHETP 99
                 +L+  C H  P
Sbjct:   104 P---LLKDNCAHIVP 115

GO:0005576 "extracellular region" evidence=ISM

TAIR|locus:504955577 AT3G48675 "AT3G48675" [Arabidopsis thaliana (taxid:3702)]

 Score = 104 (41.7 bits), Expect = 7.0e-06, P = 7.0e-06
 Identities = 26/95 (27%), Positives = 39/95 (41%)

Query:    10 FSFLMASIMGSMASARPLSNPNCWDSLIQIQACSGEIILFFLNGE-TYLGDGCCNAIRTI 68
             FS  + +I G      P+    CW SL  +Q C  EI     +G+   +   CC     I
Sbjct:    25 FSQALPTIPGLFPPGLPIDIIKCWSSLFNVQGCVQEIYKSIFSGQFASIEAPCCKTFSAI 84

Query:    69 RKKCWPNMIDTLGFTAEEGDVLEGYCDH--ETPAA 101
                CWP+M     F      +L+  C+    TP++
Sbjct:    85 DTNCWPHMFPLNPFFPP---ILKNNCERIATTPSS 116

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:504954846 AT5G52965 "AT5G52965" [Arabidopsis thaliana (taxid:3702)]

 Score = 99 (39.9 bits), Expect = 2.4e-05, P = 2.4e-05
 Identities = 18/62 (29%), Positives = 29/62 (46%)

Query:    16 SIMGSMASARPLSNPNCWDSLIQIQACSGEIILFFLNGE-TYLGDGCCNAIRTIRKKCWP 74
             ++ G +    P+    CW SL  ++ C  EI     +G+   +   CC A  T+   CWP
Sbjct:    33 TVPGLLLPGLPIDLVKCWSSLFNVEGCVLEIAKSIFSGKFENVEAACCKAFSTLDANCWP 92

Query:    75 NM 76
             +M
Sbjct:    93 HM 94

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:505006689 AT5G52975 "AT5G52975" [Arabidopsis thaliana (taxid:3702)]

 Score = 97 (39.2 bits), Expect = 3.9e-05, P = 3.9e-05
 Identities = 18/62 (29%), Positives = 28/62 (45%)

Query:    16 SIMGSMASARPLSNPNCWDSLIQIQACSGEIILFFLNGE-TYLGDGCCNAIRTIRKKCWP 74
             ++ G      P+    CW SL  ++ C  EI     +G+   +   CC A  T+   CWP
Sbjct:    34 TVPGIFPPGLPIDLVKCWSSLFNVEGCVLEIAKSIFSGKFENVEAACCKAFSTLDANCWP 93

Query:    75 NM 76
             +M
Sbjct:    94 HM 95

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: gw1.204.44.1 hypothetical protein (87 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	164
pfam05617	67	pfam05617, Prolamin_like, Prolamin-like	3e-13

>gnl|CDD|218659 pfam05617, Prolamin_like, Prolamin-like

 Score = 61.0 bits (148), Expect = 3e-13
 Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 6/68 (8%)

Query: 32 CWDSL-IQIQACSGEIILFFLNGETYLGDGCCNAIRTIRKKCWP---NMIDTLGFTAEEG 87
          CW +  ++I  C  EI       +  LG  CC AI  I   CWP    M  +L F   + 
Sbjct: 2  CWSACAVKIPGCVDEIFASIFGNKGNLGPDCCQAILKIGDDCWPALFKMFPSLPFFPPK- 60

Query: 88 DVLEGYCD 95
           +L+ YC 
Sbjct: 61 -LLKNYCS 67

Both DUF784 and DUF1278 members are found to be expressed in the plant embryo sac and are regulated by the Myb98 transcription factor. Computational analysis has revealed that they are homologous to the plant prolamin superfamily (Protease inhibitor-seed storage-LTP family, pfam00234). In contrast to the typical prolamin members that have eight conserved Cys residues forming four pairs of disulfide bonds, both DUF784 and DUF1278 domains only contain six conserved Cys residues that may form three pairs of disulfide bonds. These two domains may have potential functions in lipid transfer or protection during plant embryo sac development and reproduction. This family has been merged with the DUF1278 family. Length = 67

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	164
PLN00213	118	predicted protein; Provisional	99.93
PF05617	70	Prolamin_like: Prolamin-like; InterPro: IPR008502	99.79
PLN00214	115	putative protein; Provisional	90.01

>PLN00213 predicted protein; Provisional

Probab=99.93  E-value=6.4e-27  Score=181.23  Aligned_cols=70  Identities=26%  Similarity=0.569  Sum_probs=66.7

Q ss_pred             CCchhhhhhhccccccHHHHHHHHHhCC-cccChhhhHHHHhcccccccccccCCCCCCcccchhhcccccCCCCC
Q 039417           27 LSNPNCWDSLIQIQACSGEIILFFLNGE-TYLGDGCCNAIRTIRKKCWPNMIDTLGFTAEEGDVLEGYCDHETPAA  101 (164)
Q Consensus        27 ~d~~kCWsSL~~VqGCv~EIi~sflnGe-~~LGp~CCkAI~~I~~dCWP~MFps~PFtpee~~lLKgyCs~~~~~~  101 (164)
                      +|..||||||++++||+.||.+++++|| ++||++|||||++.+ +|||+| |++||||   ++||++|++++.++
T Consensus        43 pd~~kCwSSl~~vpGCv~EI~~si~~gkf~~Ig~aCCKAf~~~d-nCwP~~-P~~P~fP---p~LK~~Cs~i~~~~  113 (118)
T PLN00213         43 PDITKCFSSVMDIPGCIAEISQSIFTGKFGNLGPACCKAFLDAD-NCIPKI-PFIPFFP---PMLKEQCSRVAGAT  113 (118)
T ss_pred             ccHHHHHHHHcCCcchHHHHHHHHHhchhcccchHHHHHHHhhh-ccccCC-cCCCccc---hHHHHHHhcccCCC
Confidence            4999999999999999999999999999 899999999999965 999995 9999999   99999999999877

>PF05617 Prolamin_like: Prolamin-like; InterPro: IPR008502 This entry consists of several proteins of unknown function found exclusively in Arabidopsis thaliana

Probab=99.79  E-value=5.9e-20  Score=125.75  Aligned_cols=65  Identities=31%  Similarity=0.634  Sum_probs=57.3

Q ss_pred             hhhhhhccccccHHHHHHHHHhCC-cccChhhhHHHHhcccccccccccCCCCCCcccc----hhhcccc
Q 039417           31 NCWDSLIQIQACSGEIILFFLNGE-TYLGDGCCNAIRTIRKKCWPNMIDTLGFTAEEGD----VLEGYCD   95 (164)
Q Consensus        31 kCWsSL~~VqGCv~EIi~sflnGe-~~LGp~CCkAI~~I~~dCWP~MFps~PFtpee~~----lLKgyCs   95 (164)
                      |||++++++++|+.||+.+|++|+ .+||++||+||+.++++|||.|+...|++|++.+    .||++|+
T Consensus         1 kc~~~~~~~~~C~~eI~~~~~~g~~~~i~~~CC~~i~~~g~~C~~~l~~~~~~~p~~~~~~r~~l~~~C~   70 (70)
T PF05617_consen    1 KCLSSCAKSPGCGDEIFNSFFNGNKKNIGPECCKAINKMGKDCHPALFKMFPFTPFFKPLLRDLLWNHCS   70 (70)
T ss_pred             ChHHHcCCccchHHHHHHHHHcCCCCCCChHHHHHHHHHhHhHHHHHHHHccCCCCccchhHHHHHhhcC
Confidence            799999999999999999999998 9999999999999999999994444445555558    9999996

>PLN00214 putative protein; Provisional

Probab=90.01  E-value=0.29  Score=38.58  Aligned_cols=66  Identities=21%  Similarity=0.370  Sum_probs=43.2

Q ss_pred             hHHHHHHHHHhhcccccC---CCCCCchhhhhhhccccccHHHHHHHHHhCCcccChhhhHHHHhccccccc
Q 039417            6 KLFVFSFLMASIMGSMAS---ARPLSNPNCWDSLIQIQACSGEIILFFLNGETYLGDGCCNAIRTIRKKCWP   74 (164)
Q Consensus         6 kl~~~~~l~~s~t~~~as---a~~~d~~kCWsSL~~VqGCv~EIi~sflnGe~~LGp~CCkAI~~I~~dCWP   74 (164)
                      .||+.++||+..++..+-   ....--..|  +.+--+-|..||+..++. ......+||+-+...+.+|--
T Consensus        10 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~C--~~Kmt~KCa~EI~a~i~~-N~t~s~~CC~~LVk~GK~CH~   78 (115)
T PLN00214         10 TLFIVVALVCAFVPVFSVEEAEAKSLWNTC--LVKITPKCALDIIAVVFE-NGTLIDPCCNDLVKEGKVCHD   78 (115)
T ss_pred             HHHHHHHHHHhcccccchhhhHHHHHHHHH--HhhccHhhHHHHHHHHHc-CCCCchHHHHHHHHHhhHHHH
Confidence            577777788653222111   112334566  333336799999999992 234488999999999999944

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00