Citrus Sinensis ID: 039457

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260

MSFASLSSLSSLKSHLNHEPINTLLFNSSEESSFMFKTKCFDPFLYKFVPTRSFSDKISDSSPSFESSKPIDAGSSMRKPLSLWPGMYHSPVTNALWEARSRMFEKTGDKPIDSIAQSELAAKPPSKSRTSILYKFSSDYILKEQYRNPWNEMRMGKLLEDLDALAGTISYKHCCNDDGATRPILLVTASVDRMVVKKPIRVDIDLELTGAVTWVGRSSMEIQLEVTQSTQGTPYESRVFVFLAFWAMIGPWSLVLNNLG

ccccccccccccccccccccEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccccccccccccccccccccEEEEEEEccccHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEEEccEEEEcccccccEEEEEEEEEEEcccEEEEEEEEEEEcccccEEEEEEEEEEEEcccccccccccccc

cccccHcHHHHHHHccccccccEEEcccccccccEEEEccccccccccccHHHccccccccccccccccHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHccccccccccccccccccccccEEEEEEEccccHHHHHHHHcccccEEHHHHHHHHHHHHHHHHHHHccccccccccEEEEEEEEEEEEEEccccccccEEEEEEEEEEEccEEEEEEEEEEcccccEEEEEEEEEEEEccccccccEEEcccc

MSFASLSSLSSLKshlnhepintllfnsseessfmfktkcfdpflykfvptrsfsdkisdsspsfesskpidagssmrkplslwpgmyhspvTNALWEARSRMFektgdkpidsiaqselaakppsksrtsilyKFSSDYIlkeqyrnpwnemrMGKLLEDLDALAgtisykhccnddgatrpiLLVTASVDRMVVKKPIRVDIDLELTGAVTWVGRSSMEIQLEVtqstqgtpyeSRVFVFLAFWAMIGPWSLVLNNLG

MSFASLSSLSSLKSHLNHEPINTLLFNSSEESSFMFKTKCFDPFLYKFVPTRSfsdkisdsspsfesskpidagssMRKPLSLWPGMYHSPVTNALWEARSRMFEKTGDKpidsiaqselaakppsksrtsilyKFSSDYILKEQYRNPWNEMRMGKLLEDLDALAGTISYKHCCNDDGATRPILLVTasvdrmvvkkpirvdidleLTGAVTWVGRSSMEIQLEvtqstqgtpyESRVFVFLAFWAMIGPWSLVLNNLG

MsfaslsslsslkshlNHEPINTLLFNSSEESSFMFKTKCFDPFLYKFVPTRsfsdkisdsspsfesskpiDAGSSMRKPLSLWPGMYHSPVTNALWEARSRMFEKTGDKPIDSIAQSELAAKPPSKSRTSILYKFSSDYILKEQYRNPWNEMRMGKLLEDLDALAGTISYKHCCNDDGATRPILLVTASVDRMVVKKPIRVDIDLELTGAVTWVGRSSMEIQLEVTQSTQGTPYESRVFVFLAFWAMIGPWSLVLNNLG

**********************TLLFN****SSFMFKTKCFDPFLYKFVPT*******************************LWPGMYHSPVTNALWEA********************************ILYKFSSDYILKEQYRNPWNEMRMGKLLEDLDALAGTISYKHCCNDDGATRPILLVTASVDRMVVKKPIRVDIDLELTGAVTWVGRSSMEIQLEVTQSTQGTPYESRVFVFLAFWAMIGPWSLVLN***

********LSSLKSHLNHEPINTLLFNSSEESSFMFKTKCFDPFLYKF******************************K*LSLWPGMYHSPVT***********************************RTSILYKFSSDYILKEQYRNPWNEMRMGKLLEDLDALAGTISYKHCCNDDGATRPILLVTASVDRMVVKKPIRVDIDLELTGAVTWVGRSSMEIQLEVTQSTQGTPYESRVFVFLAFWAMIGPWSLVLNN**

***********LKSHLNHEPINTLLFNSSEESSFMFKTKCFDPFLYKFVPTRSF***********************RKPLSLWPGMYHSPVTNALWEARSRMFEKTGDKPIDSIAQSE*********RTSILYKFSSDYILKEQYRNPWNEMRMGKLLEDLDALAGTISYKHCCNDDGATRPILLVTASVDRMVVKKPIRVDIDLELTGAVTWVGRSSMEIQLEVTQSTQGTPYESRVFVFLAFWAMIGPWSLVLNNLG

*********SSLKSHLNHEPINTLLFNSSEESSFMFKTKCFDPFLYKFVPTRSFSDKIS*******SSKPIDAGSSMRKPLSLWPGMYHSPVTNALWEARSRMFEKT************LAAKPPSKSRTSILYKFSSDYILKEQYRNPWNEMRMGKLLEDLDALAGTISYKHCCNDDGATRPILLVTASVDRMVVKKPIRVDIDLELTGAVTWVGRSSMEIQLEVTQSTQGTPYESRVFVFLAFWAMIGPWSLVL****

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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooo

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		260	2.2.26 [Sep-21-2011]
Q9Y305		439	Acyl-coenzyme A thioester	yes	no	0.465	0.275	0.330	3e-12
Q9R0X4		439	Acyl-coenzyme A thioester	yes	no	0.430	0.255	0.336	3e-12
Q3SWX2		437	Acyl-coenzyme A thioester	yes	no	0.496	0.295	0.310	3e-11
Q32MW3		439	Acyl-coenzyme A thioester	yes	no	0.403	0.239	0.330	1e-10

>sp\|Q9Y305\|ACOT9_HUMAN Acyl-coenzyme A thioesterase 9, mitochondrial OS=Homo sapiens GN=ACOT9 PE=1 SV=2	Back alignment and function desciption

 Score = 72.4 bits (176), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 72/127 (56%), Gaps = 6/127 (4%)

Query: 124 PPSKSRTS---ILYKFSSDYILKEQYRNPWNEMRMGKLLEDLDALAGTISYKHCCNDDGA 180
           PP + + S   +L    S+  L+E+Y    N +R G++LEDLD+L   I Y H       
Sbjct: 79  PPRRMKDSYIEVLLPLGSEPELREKYLTVQNTVRFGRILEDLDSLGVLICYMHNKIHSAK 138

Query: 181 TRPILLVTASVDRM-VVKKPIRVDIDLELTGAVTWVGRSSMEIQLEVTQ--STQGTPYES 237
             P+ +VTA VD++ + KK +  + D++ +G V+WVG++SME+++++ Q    +  P   
Sbjct: 139 MSPLSIVTALVDKIDMCKKSLSPEQDIKFSGHVSWVGKTSMEVKMQMFQLHGDEFCPVLD 198

Query: 238 RVFVFLA 244
             FV +A
Sbjct: 199 ATFVMVA 205

Acyl-CoA thioesterases are a group of enzymes that catalyze the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Active on long chain acyl-CoAs.
Homo sapiens (taxid: 9606)
EC: 3EC: .EC: 1EC: .EC: 2EC: .EC: -

>sp\|Q9R0X4\|ACOT9_MOUSE Acyl-coenzyme A thioesterase 9, mitochondrial OS=Mus musculus GN=Acot9 PE=1 SV=1	Back alignment and function description

>sp\|Q3SWX2\|ACOT9_BOVIN Acyl-coenzyme A thioesterase 9, mitochondrial OS=Bos taurus GN=ACOT9 PE=2 SV=1	Back alignment and function description

>sp\|Q32MW3\|ACO10_MOUSE Acyl-coenzyme A thioesterase 10, mitochondrial OS=Mus musculus GN=Acot10 PE=2 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		260
255587819		248	acyl-CoA thioesterase, putative [Ricinus	0.761	0.798	0.669	5e-74
224141103		416	predicted protein [Populus trichocarpa]	0.742	0.463	0.683	6e-74
225434158		520	PREDICTED: acyl-coenzyme A thioesterase	0.665	0.332	0.739	3e-70
147865453		418	hypothetical protein VITISV_000710 [Viti	0.630	0.392	0.756	2e-68
297826491		459	thioesterase family protein [Arabidopsis	0.75	0.424	0.629	6e-64
357475683		438	Acyl-coenzyme A thioesterase [Medicago t	0.780	0.463	0.579	1e-63
357475685		284	Acyl-coenzyme A thioesterase [Medicago t	0.784	0.718	0.576	2e-63
255583385		452	acyl-CoA thioesterase, putative [Ricinus	0.653	0.376	0.670	4e-63
42569481		455	thioesterase domain-containing protein [	0.703	0.402	0.643	7e-63
357507919		444	Acyl-CoA thioesterase [Medicago truncatu	0.7	0.409	0.627	1e-62

>gi\|255587819\|ref\|XP_002534407.1\| acyl-CoA thioesterase, putative [Ricinus communis] gi\|223525354\|gb\|EEF27976.1\| acyl-CoA thioesterase, putative [Ricinus communis]	Back alignment and taxonomy information

 Score =  283 bits (724), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 142/212 (66%), Positives = 167/212 (78%), Gaps = 14/212 (6%)

Query: 27  NSSEESSFMFKTKCFDPFLYKFVPTRSFS-DKISD-----------SSPSFESSKPIDAG 74
           N S++S  + +T  +DP    F+  R FS ++I D           +SPS ES+ PIDAG
Sbjct: 27  NFSKQSKPILETALYDPIPCHFIRRRCFSSNEIPDPQNVTQKVSAFTSPS-ESTAPIDAG 85

Query: 75  SSMRKPLSLWPGMYHSPVTNALWEARSRMFEK-TGDKPIDSIAQSELAAKPPSKSRTSIL 133
           SS+RKP+SLWPGMYHSPVTNALWEARS +FEK   D P+D  ++SEL  K PS+SRT IL
Sbjct: 86  SSIRKPISLWPGMYHSPVTNALWEARSSIFEKPAADSPLDDSSESELVTKTPSRSRTVIL 145

Query: 134 YKFSSDYILKEQYRNPWNEMRMGKLLEDLDALAGTISYKHCCNDDGATRPILLVTASVDR 193
           Y FSSD++L+EQYRNPWNE+RMGKL+EDLDALAGTISYKHCCN+DG TRPILLVTASVDR
Sbjct: 146 YNFSSDFVLREQYRNPWNEIRMGKLVEDLDALAGTISYKHCCNEDGMTRPILLVTASVDR 205

Query: 194 MVVKKPIRVDIDLELTGAVTWVGRSSMEIQLE 225
           MV+K PIRVD DL + GAVTWVGRSSMEIQLE
Sbjct: 206 MVLKMPIRVDADLRIAGAVTWVGRSSMEIQLE 237

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|224141103\|ref\|XP_002323914.1\| predicted protein [Populus trichocarpa] gi\|222866916\|gb\|EEF04047.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|225434158\|ref\|XP_002275033.1\| PREDICTED: acyl-coenzyme A thioesterase 9, mitochondrial [Vitis vinifera]	Back alignment and taxonomy information

>gi\|147865453\|emb\|CAN79406.1\| hypothetical protein VITISV_000710 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|297826491\|ref\|XP_002881128.1\| thioesterase family protein [Arabidopsis lyrata subsp. lyrata] gi\|297326967\|gb\|EFH57387.1\| thioesterase family protein [Arabidopsis lyrata subsp. lyrata]	Back alignment and taxonomy information

>gi\|357475683\|ref\|XP_003608127.1\| Acyl-coenzyme A thioesterase [Medicago truncatula] gi\|355509182\|gb\|AES90324.1\| Acyl-coenzyme A thioesterase [Medicago truncatula]	Back alignment and taxonomy information

>gi\|357475685\|ref\|XP_003608128.1\| Acyl-coenzyme A thioesterase [Medicago truncatula] gi\|355509183\|gb\|AES90325.1\| Acyl-coenzyme A thioesterase [Medicago truncatula]	Back alignment and taxonomy information

>gi\|255583385\|ref\|XP_002532453.1\| acyl-CoA thioesterase, putative [Ricinus communis] gi\|223527843\|gb\|EEF29939.1\| acyl-CoA thioesterase, putative [Ricinus communis]	Back alignment and taxonomy information

>gi\|42569481\|ref\|NP_180630.2\| thioesterase domain-containing protein [Arabidopsis thaliana] gi\|50897168\|gb\|AAT85723.1\| At2g30720 [Arabidopsis thaliana] gi\|56121924\|gb\|AAV74243.1\| At2g30720 [Arabidopsis thaliana] gi\|330253338\|gb\|AEC08432.1\| thioesterase domain-containing protein [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|357507919\|ref\|XP_003624248.1\| Acyl-CoA thioesterase [Medicago truncatula] gi\|124361015\|gb\|ABN08987.1\| Phosphoglucomutase/phosphomannomutase C terminal; Thioesterase superfamily [Medicago truncatula] gi\|355499263\|gb\|AES80466.1\| Acyl-CoA thioesterase [Medicago truncatula]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		260
TAIR\|locus:2054487		455	AT2G30720 [Arabidopsis thalian	0.665	0.380	0.666	1.2e-58
TAIR\|locus:2156258		438	AT5G48370 [Arabidopsis thalian	0.584	0.347	0.697	3.4e-54
DICTYBASE\|DDB_G0286507		632	DDB_G0286507 "putative acyl-Co	0.488	0.200	0.423	2.2e-21
DICTYBASE\|DDB_G0292458		588	DDB_G0292458 [Dictyostelium di	0.584	0.258	0.355	2.1e-19
ZFIN\|ZDB-GENE-051113-136		425	acot9.2 "acyl-CoA thioesterase	0.453	0.277	0.369	1e-15
ASPGD\|ASPL0000071253		463	AN10552 [Emericella nidulans (	0.588	0.330	0.355	1.6e-14
CGD\|CAL0003675		507	orf19.5293 [Candida albicans (	0.415	0.213	0.405	6.7e-14
UNIPROTKB\|Q5A5V8		507	ACT2 "Putative uncharacterized	0.415	0.213	0.405	6.7e-14
UNIPROTKB\|Q9Y305		439	ACOT9 "Acyl-coenzyme A thioest	0.561	0.332	0.298	4.7e-13
MGI\|MGI:1928939		439	Acot9 "acyl-CoA thioesterase 9	0.511	0.302	0.302	4.7e-13

TAIR\|locus:2054487 AT2G30720 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 602 (217.0 bits), Expect = 1.2e-58, P = 1.2e-58
 Identities = 124/186 (66%), Positives = 148/186 (79%)

Query:    72 DAGSSMRKPLSLWPGMYHSPVTNALWEARSRMFE-KTGDKPIDSIAQSELAAKPPSKSRT 130
             DAGSSMRKP+SLWPGMYHSPVTNALWEAR  MFE  TGD   D+ +QS+L AK PS+SRT
Sbjct:    51 DAGSSMRKPISLWPGMYHSPVTNALWEARRNMFEIPTGD---DA-SQSKLTAKSPSRSRT 106

Query:   131 SILYKFSSDYILKEQYRNPWNEMRMGKLLEDLDALAGTISYKHCCNDDGATRPILLVTAS 190
             SILYKFSSD++L+EQYRNPWNE+R GKL+EDLDALAGTIS+KHC  D  A R ++LVTAS
Sbjct:   107 SILYKFSSDFVLREQYRNPWNEIRTGKLVEDLDALAGTISFKHCGGDSSA-RSMILVTAS 165

Query:   191 VDRMVVKKPIRVDIDLELTGAVTWVGRSSMEIQLEVTQ------STQGTPYESRVFVFLA 244
             VDR+++K+PIRVD DL + GAVTWVGRSSME+QL+V Q      S++    E+  F F+A
Sbjct:   166 VDRIIMKRPIRVDTDLSIVGAVTWVGRSSMEMQLQVLQIQDTNNSSESVALEAN-FTFVA 224

Query:   245 FWAMIG 250
               A  G
Sbjct:   225 RDAQTG 230

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016788 "hydrolase activity, acting on ester bonds" evidence=ISS

GO:0047617 "acyl-CoA hydrolase activity" evidence=ISS

TAIR\|locus:2156258 AT5G48370 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

DICTYBASE\|DDB_G0286507 DDB_G0286507 "putative acyl-CoA thioester hydrolase" [Dictyostelium discoideum (taxid:44689)]	Back alignment and assigned GO terms

DICTYBASE\|DDB_G0292458 DDB_G0292458 [Dictyostelium discoideum (taxid:44689)]	Back alignment and assigned GO terms

ZFIN\|ZDB-GENE-051113-136 acot9.2 "acyl-CoA thioesterase 9.2" [Danio rerio (taxid:7955)]	Back alignment and assigned GO terms

ASPGD\|ASPL0000071253 AN10552 [Emericella nidulans (taxid:162425)]	Back alignment and assigned GO terms

CGD\|CAL0003675 orf19.5293 [Candida albicans (taxid:5476)]	Back alignment and assigned GO terms

UNIPROTKB\|Q5A5V8 ACT2 "Putative uncharacterized protein ACT2" [Candida albicans SC5314 (taxid:237561)]	Back alignment and assigned GO terms

UNIPROTKB\|Q9Y305 ACOT9 "Acyl-coenzyme A thioesterase 9, mitochondrial" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

MGI\|MGI:1928939 Acot9 "acyl-CoA thioesterase 9" [Mus musculus (taxid:10090)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.1.2	LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		260
PLN02647		437	PLN02647, PLN02647, acyl-CoA thioesterase	1e-108
cd03442		123	cd03442, BFIT_BACH, Brown fat-inducible thioestera	1e-27
COG1607		157	COG1607, COG1607, Acyl-CoA hydrolase [Lipid metabo	1e-11
cd03440		100	cd03440, hot_dog, The hotdog fold was initially id	2e-05
pfam03061		79	pfam03061, 4HBT, Thioesterase superfamily	1e-04

>gnl\|CDD\|215349 PLN02647, PLN02647, acyl-CoA thioesterase	Back alignment and domain information

 Score =  318 bits (816), Expect = e-108
 Identities = 128/177 (72%), Positives = 146/177 (82%)

Query: 61  SSPSFESSKPIDAGSSMRKPLSLWPGMYHSPVTNALWEARSRMFEKTGDKPIDSIAQSEL 120
           S      +  IDAGSS RKPLSLWPGMYHSPVTNALWEARS +FE+  D P D+  QSEL
Sbjct: 19  SPSLSPGNGSIDAGSSTRKPLSLWPGMYHSPVTNALWEARSSIFERLLDPPKDAPPQSEL 78

Query: 121 AAKPPSKSRTSILYKFSSDYILKEQYRNPWNEMRMGKLLEDLDALAGTISYKHCCNDDGA 180
             K PS+SRTSILYKFSSD+IL+EQYRNPWNE+R+GKLLEDLDALAGTIS KHC +DD  
Sbjct: 79  LTKTPSQSRTSILYKFSSDFILREQYRNPWNEVRIGKLLEDLDALAGTISVKHCSDDDST 138

Query: 181 TRPILLVTASVDRMVVKKPIRVDIDLELTGAVTWVGRSSMEIQLEVTQSTQGTPYES 237
           TRP+LLVTASVD++V+KKPIRVD+DL++ GAVTWVGRSSMEIQLEV Q T+     S
Sbjct: 139 TRPLLLVTASVDKIVLKKPIRVDVDLKIVGAVTWVGRSSMEIQLEVIQPTKDESNTS 195

Length = 437

>gnl\|CDD\|239526 cd03442, BFIT_BACH, Brown fat-inducible thioesterase (BFIT)	Back alignment and domain information

>gnl\|CDD\|224523 COG1607, COG1607, Acyl-CoA hydrolase [Lipid metabolism]	Back alignment and domain information

>gnl\|CDD\|239524 cd03440, hot_dog, The hotdog fold was initially identified in the E	Back alignment and domain information

>gnl\|CDD\|217345 pfam03061, 4HBT, Thioesterase superfamily	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		260
PLN02647		437	acyl-CoA thioesterase	100.0
COG1607		157	Acyl-CoA hydrolase [Lipid metabolism]	99.94
PRK10694		133	acyl-CoA esterase; Provisional	99.91
PLN02647		437	acyl-CoA thioesterase	99.88
KOG2763		357	consensus Acyl-CoA thioesterase [Lipid transport a	99.81
cd03442		123	BFIT_BACH Brown fat-inducible thioesterase (BFIT).	99.71
KOG2763		357	consensus Acyl-CoA thioesterase [Lipid transport a	99.61
PRK10293		136	acyl-CoA esterase; Provisional	99.59
PRK10254		137	thioesterase; Provisional	99.58
PLN02322		154	acyl-CoA thioesterase	99.55
TIGR02286		114	PaaD phenylacetic acid degradation protein PaaD. S	99.53
TIGR00369		117	unchar_dom_1 uncharacterized domain 1. Most protei	99.51
COG2050		141	PaaI HGG motif-containing thioesterase, possibly i	99.5
PRK11688		154	hypothetical protein; Provisional	99.44
PF03061		79	4HBT: Thioesterase superfamily; InterPro: IPR00668	99.35
cd03443		113	PaaI_thioesterase PaaI_thioesterase is a tetrameri	99.33
TIGR02447		138	yiiD_Cterm thioesterase domain, putative. This fam	99.03
KOG3328		148	consensus HGG motif-containing thioesterase [Gener	98.94
cd00586		110	4HBT 4-hydroxybenzoyl-CoA thioesterase (4HBT). Cat	98.94
PRK04424		185	fatty acid biosynthesis transcriptional regulator;	98.75
cd03440		100	hot_dog The hotdog fold was initially identified i	98.72
cd00556		99	Thioesterase_II Thioesterase II (TEII) is thought	98.69
TIGR02799		126	thio_ybgC tol-pal system-associated acyl-CoA thioe	98.52
PRK10800		130	acyl-CoA thioesterase YbgC; Provisional	98.41
PF14539		132	DUF4442: Domain of unknown function (DUF4442); PDB	98.4
TIGR00051		117	acyl-CoA thioester hydrolase, YbgC/YbaW family. Th	98.23
PF13279		121	4HBT_2: Thioesterase-like superfamily; PDB: 2W3X_E	98.19
PRK00006		147	fabZ (3R)-hydroxymyristoyl-ACP dehydratase; Review	98.0
cd01288		131	FabZ FabZ is a 17kD beta-hydroxyacyl-acyl carrier	97.96
COG0824		137	FcbC Predicted thioesterase [General function pred	97.95
cd03445		94	Thioesterase_II_repeat2 Thioesterase II (TEII) is	97.76
PRK07531		495	bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe	97.66
PF13622		255	4HBT_3: Thioesterase-like superfamily; PDB: 2PIM_A	97.6
cd03449		128	R_hydratase (R)-hydratase [(R)-specific enoyl-CoA	97.41
KOG4781		237	consensus Uncharacterized conserved protein [Funct	97.14
TIGR01750		140	fabZ beta-hydroxyacyl-[acyl carrier protein] dehyd	97.08
TIGR00189		271	tesB acyl-CoA thioesterase II. Subunit: homotetram	97.02
PF09500		144	YiiD_Cterm: Putative thioesterase (yiiD_Cterm); In	96.97
cd00493		131	FabA_FabZ FabA/Z, beta-hydroxyacyl-acyl carrier pr	96.61
PRK10526		286	acyl-CoA thioesterase II; Provisional	96.51
COG4109		432	Predicted transcriptional regulator containing CBS	96.43
PF07977		138	FabA: FabA-like domain; InterPro: IPR013114 Fatty	96.34
cd03446		140	MaoC_like MoaC_like Similar to the MaoC (monoamine	95.72
PLN02868		413	acyl-CoA thioesterase family protein	95.54
PRK13188		464	bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetyl	95.44
cd03441		127	R_hydratase_like (R)-hydratase [(R)-specific enoyl	95.2
cd03451		146	FkbR2 FkbR2 is a Streptomyces hygroscopicus protei	95.06
cd03455		123	SAV4209 SAV4209 is a Streptomyces avermitilis prot	94.85
PRK13692		159	(3R)-hydroxyacyl-ACP dehydratase subunit HadA; Pro	94.81
cd01289		138	FabA_like Domain of unknown function, appears to b	94.35
COG0764		147	FabA 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl ca	94.22
cd03447		126	FAS_MaoC FAS_MaoC, the MaoC-like hot dog fold of t	94.09
cd01287		150	FabA FabA, beta-hydroxydecanoyl-acyl carrier prote	93.96
cd03454		140	YdeM YdeM is a Bacillus subtilis protein that belo	93.71
PRK13691		166	(3R)-hydroxyacyl-ACP dehydratase subunit HadC; Pro	93.64
cd03452		142	MaoC_C MaoC_C The C-terminal hot dog fold of the M	93.24
cd03450		149	NodN NodN (nodulation factor N) contains a single	93.22
PLN02370		419	acyl-ACP thioesterase	93.1
PF01575		122	MaoC_dehydratas: MaoC like domain; InterPro: IPR00	92.57
cd03453		127	SAV4209_like SAV4209_like. Similar in sequence to	92.46
PRK08190		466	bifunctional enoyl-CoA hydratase/phosphate acetylt	89.15
COG5496		130	Predicted thioesterase [General function predictio	89.07
COG1946		289	TesB Acyl-CoA thioesterase [Lipid metabolism]	84.71
KOG3016		294	consensus Acyl-CoA thioesterase [Lipid transport a	84.26
PF13452		132	MaoC_dehydrat_N: N-terminal half of MaoC dehydrata	82.11
PF03756		132	AfsA: A-factor biosynthesis hotdog domain; InterPr	81.51
COG2030		159	MaoC Acyl dehydratase [Lipid metabolism]	81.4
PF01643		261	Acyl-ACP_TE: Acyl-ACP thioesterase; InterPro: IPR0	81.02
cd03444		104	Thioesterase_II_repeat1 Thioesterase II (TEII) is	80.24

>PLN02647 acyl-CoA thioesterase	Back alignment and domain information

Probab=100.00  E-value=8.7e-49  Score=378.88  Aligned_cols=187  Identities=69%  Similarity=1.065  Sum_probs=178.5

Q ss_pred             CCCCCccccccccccccCCcceechhhHHHHHHhhhhhhccCCCCCCcccccCCCcCCCCCCeEEEEEecccccccCccc
Q 039457           67 SSKPIDAGSSMRKPLSLWPGMYHSPVTNALWEARSRMFEKTGDKPIDSIAQSELAAKPPSKSRTSILYKFSSDYILKEQY  146 (260)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~pg~~~spvt~~Lw~~R~~l~~r~~~~~~~~~~q~~L~~r~m~DS~~~~~lp~~sd~~lrp~y  146 (260)
                      ....||+++++|||++|||||||+|||++||++|.+++|+..+++.++++|.+|+.|+|+||++++.+||++|..++|+|
T Consensus        25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~k~~~~S~~~~~~~~~~d~~l~~~y  104 (437)
T PLN02647         25 GNGSIDAGSSTRKPLSLWPGMYHSPVTNALWEARSSIFERLLDPPKDAPPQSELLTKTPSQSRTSILYKFSSDFILREQY  104 (437)
T ss_pred             CCcccCCCccccCccccCCccccChHHHHHHHHHHHHhhhccCcccccCccccccccccccceEEEEEecCCchhhchhh
Confidence            46679999999999999999999999999999999999999899999999999999999999999999999999999999


Q ss_pred             CCCCCceeHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEEEEccEEEecccCCCcEEEEEEEEEEEecCEEEEEEEE
Q 039457          147 RNPWNEMRMGKLLEDLDALAGTISYKHCCNDDGATRPILLVTASVDRMVVKKPIRVDIDLELTGAVTWVGRSSMEIQLEV  226 (260)
Q Consensus       147 ~N~~G~LrGGrLLe~LD~lAg~iA~rh~~~~~~~~~P~~iVTAsVD~I~Fl~Pv~vG~dL~l~G~Vt~tGrSSmEV~V~V  226 (260)
                      +|++|++|||+||+|||.+|+++|++||+.+++.++|+.+|||+||+|+|++|+++|++|++.|+|+|+|+|||||.|+|
T Consensus       105 ~N~~G~l~gG~LLe~mD~~A~~~A~rh~~~~~~~~~p~~vVTAsVD~i~F~~Pi~~g~~v~l~g~Vt~vGrSSMEV~v~V  184 (437)
T PLN02647        105 RNPWNEVRIGKLLEDLDALAGTISVKHCSDDDSTTRPLLLVTASVDKIVLKKPIRVDVDLKIVGAVTWVGRSSMEIQLEV  184 (437)
T ss_pred             cCCCCcEeHhHHHHHHHHHHHHHHHHHhCCCcccCCcceEEEEEECcEEEcCCCcCCcEEEEEEEEEEecCCeEEEEEEE
Confidence            99999999999999999999999999999877788898999999999999999999999999999999999999999999


Q ss_pred             EEecCCCCCCceEEEEEEEEEEEccCh
Q 039457          227 TQSTQGTPYESRVFVFLAFWAMIGPWS  253 (260)
Q Consensus       227 ~q~~~~~~tg~~~lv~tA~FTfVA~~~  253 (260)
                      .+++.+..++++..+++|+|||||++.
T Consensus       185 ~~~~~~~~~~~~~~~~~a~FtfVA~D~  211 (437)
T PLN02647        185 IQPTKDESNTSDSVALTANFTFVARDS  211 (437)
T ss_pred             EEccccCCCCcEEEEEEEEEEEEEEcC
Confidence            998744557788999999999999885

>COG1607 Acyl-CoA hydrolase [Lipid metabolism]	Back alignment and domain information

>PRK10694 acyl-CoA esterase; Provisional	Back alignment and domain information

>PLN02647 acyl-CoA thioesterase	Back alignment and domain information

>KOG2763 consensus Acyl-CoA thioesterase [Lipid transport and metabolism]	Back alignment and domain information

>cd03442 BFIT_BACH Brown fat-inducible thioesterase (BFIT)	Back alignment and domain information

>KOG2763 consensus Acyl-CoA thioesterase [Lipid transport and metabolism]	Back alignment and domain information

>PRK10293 acyl-CoA esterase; Provisional	Back alignment and domain information

>PRK10254 thioesterase; Provisional	Back alignment and domain information

>PLN02322 acyl-CoA thioesterase	Back alignment and domain information

>TIGR02286 PaaD phenylacetic acid degradation protein PaaD	Back alignment and domain information

>TIGR00369 unchar_dom_1 uncharacterized domain 1	Back alignment and domain information

>COG2050 PaaI HGG motif-containing thioesterase, possibly involved in aromatic compounds catabolism [Secondary metabolites biosynthesis, transport, and catabolism]	Back alignment and domain information

>PRK11688 hypothetical protein; Provisional	Back alignment and domain information

>PF03061 4HBT: Thioesterase superfamily; InterPro: IPR006683 This family contains a wide variety of enzymes, principally thioesterases	Back alignment and domain information

>cd03443 PaaI_thioesterase PaaI_thioesterase is a tetrameric acyl-CoA thioesterase with a hot dog fold and one of several proteins responsible for phenylacetic acid (PA) degradation in bacteria	Back alignment and domain information

>TIGR02447 yiiD_Cterm thioesterase domain, putative	Back alignment and domain information

>KOG3328 consensus HGG motif-containing thioesterase [General function prediction only]	Back alignment and domain information

>cd00586 4HBT 4-hydroxybenzoyl-CoA thioesterase (4HBT)	Back alignment and domain information

>PRK04424 fatty acid biosynthesis transcriptional regulator; Provisional	Back alignment and domain information

>cd03440 hot_dog The hotdog fold was initially identified in the E	Back alignment and domain information

>cd00556 Thioesterase_II Thioesterase II (TEII) is thought to regenerate misprimed nonribosomal peptide synthetases (NRPSs) as well as modular polyketide synthases (PKSs) by hydrolyzing acetyl groups bound to the peptidyl carrier protein (PCP) and acyl carrier protein (ACP) domains, respectively	Back alignment and domain information

>TIGR02799 thio_ybgC tol-pal system-associated acyl-CoA thioesterase	Back alignment and domain information

>PRK10800 acyl-CoA thioesterase YbgC; Provisional	Back alignment and domain information

>PF14539 DUF4442: Domain of unknown function (DUF4442); PDB: 1YOC_B 1SH8_B	Back alignment and domain information

>TIGR00051 acyl-CoA thioester hydrolase, YbgC/YbaW family	Back alignment and domain information

>PF13279 4HBT_2: Thioesterase-like superfamily; PDB: 2W3X_E 3CK1_A 2GF6_C 2NUJ_A 2HLJ_A 2XFL_B 2XEM_B 2OIW_B 2HX5_A 2FUJ_A	Back alignment and domain information

>PRK00006 fabZ (3R)-hydroxymyristoyl-ACP dehydratase; Reviewed	Back alignment and domain information

>cd01288 FabZ FabZ is a 17kD beta-hydroxyacyl-acyl carrier protein (ACP) dehydratase that primarily catalyzes the dehydration of beta-hydroxyacyl-ACP to trans-2-acyl-ACP, the third step in the elongation phase of the bacterial/ plastid, type II, fatty-acid biosynthesis pathway	Back alignment and domain information

>COG0824 FcbC Predicted thioesterase [General function prediction only]	Back alignment and domain information

>cd03445 Thioesterase_II_repeat2 Thioesterase II (TEII) is thought to regenerate misprimed nonribosomal peptide synthetases (NRPSs) as well as modular polyketide synthases (PKSs) by hydrolyzing acetyl groups bound to the peptidyl carrier protein (PCP) and acyl carrier protein (ACP) domains, respectively	Back alignment and domain information

>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated	Back alignment and domain information

>PF13622 4HBT_3: Thioesterase-like superfamily; PDB: 2PIM_A 3RQB_A 3CJY_A 3RD7_A 3BBJ_B	Back alignment and domain information

>cd03449 R_hydratase (R)-hydratase [(R)-specific enoyl-CoA hydratase] catalyzes the hydration of trans-2-enoyl CoA to (R)-3-hydroxyacyl-CoA as part of the PHA (polyhydroxyalkanoate) biosynthetic pathway	Back alignment and domain information

>KOG4781 consensus Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>TIGR01750 fabZ beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ	Back alignment and domain information

>TIGR00189 tesB acyl-CoA thioesterase II	Back alignment and domain information

>PF09500 YiiD_Cterm: Putative thioesterase (yiiD_Cterm); InterPro: IPR012660 This entry consists of a broadly distributed uncharacterised domain found often as a standalone protein	Back alignment and domain information

>cd00493 FabA_FabZ FabA/Z, beta-hydroxyacyl-acyl carrier protein (ACP)-dehydratases: One of several distinct enzyme types of the dissociative, type II, fatty acid synthase system (found in bacteria and plants) required to complete successive cycles of fatty acid elongation	Back alignment and domain information

>PRK10526 acyl-CoA thioesterase II; Provisional	Back alignment and domain information

>COG4109 Predicted transcriptional regulator containing CBS domains [Transcription]	Back alignment and domain information

>PF07977 FabA: FabA-like domain; InterPro: IPR013114 Fatty acids biosynthesis occurs by two distinct pathways: in fungi, mammals and mycobacteria, type I or associative fatty-acid biosynthesis (type I FAS) is accomplished by multifunctional proteins in which distinct domains catalyse specific reactions; in plants and most bacteria, type II or dissociative fatty-acid biosynthesis (type II FAS) is accomplished by distinct enzymes []

Back alignment and domain information

>cd03446 MaoC_like MoaC_like Similar to the MaoC (monoamine oxidase C) dehydratase regulatory protein but without the N-terminal PutA domain	Back alignment and domain information

>PLN02868 acyl-CoA thioesterase family protein	Back alignment and domain information

>PRK13188 bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; Reviewed	Back alignment and domain information

>cd03441 R_hydratase_like (R)-hydratase [(R)-specific enoyl-CoA hydratase]	Back alignment and domain information

>cd03451 FkbR2 FkbR2 is a Streptomyces hygroscopicus protein with a hot dog fold that belongs to a conserved family of proteins found in prokaryotes and archaea but not in eukaryotes	Back alignment and domain information

>cd03455 SAV4209 SAV4209 is a Streptomyces avermitilis protein with a hot dog fold that is similar to those of (R)-specific enoyl-CoA hydratase, the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit	Back alignment and domain information

>PRK13692 (3R)-hydroxyacyl-ACP dehydratase subunit HadA; Provisional	Back alignment and domain information

>cd01289 FabA_like Domain of unknown function, appears to be related to a diverse group of beta-hydroxydecanoyl ACP dehydratases (FabA) and beta-hydroxyacyl ACP dehydratases (FabZ)	Back alignment and domain information

>COG0764 FabA 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases [Lipid metabolism]	Back alignment and domain information

>cd03447 FAS_MaoC FAS_MaoC, the MaoC-like hot dog fold of the fatty acid synthase, beta subunit	Back alignment and domain information

>cd01287 FabA FabA, beta-hydroxydecanoyl-acyl carrier protein (ACP)-dehydratase: Bacterial protein of the type II, fatty acid synthase system that binds ACP and catalyzes both dehydration and isomerization reactions, apparently in the same active site	Back alignment and domain information

>cd03454 YdeM YdeM is a Bacillus subtilis protein that belongs to a family of prokaryotic proteins of unkown function	Back alignment and domain information

>PRK13691 (3R)-hydroxyacyl-ACP dehydratase subunit HadC; Provisional	Back alignment and domain information

>cd03452 MaoC_C MaoC_C The C-terminal hot dog fold of the MaoC (monoamine oxidase C) dehydratase regulatory protein	Back alignment and domain information

>cd03450 NodN NodN (nodulation factor N) contains a single hot dog fold similar to those of the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit	Back alignment and domain information

>PLN02370 acyl-ACP thioesterase	Back alignment and domain information

>PF01575 MaoC_dehydratas: MaoC like domain; InterPro: IPR002539 The C terminus of the MaoC protein is found to share similarity with a wide variety of enzymes	Back alignment and domain information

>cd03453 SAV4209_like SAV4209_like	Back alignment and domain information

>PRK08190 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase; Validated	Back alignment and domain information

>COG5496 Predicted thioesterase [General function prediction only]	Back alignment and domain information

>COG1946 TesB Acyl-CoA thioesterase [Lipid metabolism]	Back alignment and domain information

>KOG3016 consensus Acyl-CoA thioesterase [Lipid transport and metabolism]	Back alignment and domain information

>PF13452 MaoC_dehydrat_N: N-terminal half of MaoC dehydratase; PDB: 3HMJ_H 2UV8_I 2VKZ_G 1S9C_K 3OML_A 3KHP_A	Back alignment and domain information

>PF03756 AfsA: A-factor biosynthesis hotdog domain; InterPro: IPR005509 The AfsA family are key enzymes in A-factor biosynthesis, which is essential for streptomycin production and resistance	Back alignment and domain information

>COG2030 MaoC Acyl dehydratase [Lipid metabolism]	Back alignment and domain information

>PF01643 Acyl-ACP_TE: Acyl-ACP thioesterase; InterPro: IPR002864 This entry represents various acyl-acyl carrier protein (ACP) thioesterases (TE) which terminate fatty acyl group extension via hydrolysing an acyl group on a fatty acid []	Back alignment and domain information

>cd03444 Thioesterase_II_repeat1 Thioesterase II (TEII) is thought to regenerate misprimed nonribosomal peptide synthetases (NRPSs) as well as modular polyketide synthases (PKSs) by hydrolyzing acetyl groups bound to the peptidyl carrier protein (PCP) and acyl carrier protein (ACP) domains, respectively	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Alignment Graph	Length	Definition	E-value
Query		260
3sps_A		169	Crystal Structure Of Apo-Hexameric Acyl-Coa Thioest		6e-04

>pdb|3SPS|A Chain A, Crystal Structure Of Apo-Hexameric Acyl-Coa Thioesterase Length = 169

Back alignment and structure

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 8/71 (11%)
Query: 156 GKLLEDLDALAGTISYKHCCNDDGATRPILLVTASVDRMVVKKPIRVDIDLELTGAVTWV 215
           GK+L  +D +A   + KH  +         +VTAS+D +  K    V   LEL G VT  
Sbjct: 44  GKVLAYIDEIAALTAMKHANS--------AVVTASIDSVDFKSSATVGDALELEGFVTHT 95
Query: 216 GRSSMEIQLEV 226
           GR+SME+ + V
Sbjct: 96  GRTSMEVYVRV 106

PyMOL of 3sps

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		260
3b7k_A		333	Acyl-coenzyme A thioesterase 12; hotdog fold, stru	2e-30
3b7k_A		333	Acyl-coenzyme A thioesterase 12; hotdog fold, stru	8e-13
2qq2_A		193	Cytosolic acyl coenzyme A thioester hydrolase; ACO	3e-23
2q2b_A		179	Cytosolic acyl coenzyme A thioester hydrolase; ACO	2e-19
1y7u_A		174	Acyl-COA hydrolase; structural genomics, coenzyme	1e-15
2v1o_A		151	Cytosolic acyl coenzyme A thioester hydrolase; acy	4e-15
3d6l_A		137	Putative hydrolase; hot DOG fold, thioesterase, ac	7e-13
2eis_A		133	Hypothetical protein TTHB207; COA binding motif, N	8e-13
2gvh_A		288	AGR_L_2016P; 15159470, acyl-COA hydrolase, structu	1e-12
2gvh_A		288	AGR_L_2016P; 15159470, acyl-COA hydrolase, structu	3e-12
1vpm_A		169	Acyl-COA hydrolase; NP_241664.1, structural genomi	2e-12
3bjk_A		153	Acyl-COA thioester hydrolase HI0827; hotdog fold,	3e-12

>3b7k_A Acyl-coenzyme A thioesterase 12; hotdog fold, structural genomics, structural genomics consor SGC, fatty acid metabolism, hydrolase; HET: COA; 2.70A {Homo sapiens} Length = 333	Back alignment and structure

 Score =  114 bits (288), Expect = 2e-30
 Identities = 24/107 (22%), Positives = 42/107 (39%), Gaps = 14/107 (13%)

Query: 122 AKPPSKSRTSILYKFSSDYILKEQYRNPWNEMRMGKLLEDLDALAGTISYKHCCNDDGAT 181
               S     +         ++  +     E+  G+LL+ +D  A   + KH        
Sbjct: 18  LYFQSMGEVVM------SQAIQPAHATARGELSAGQLLKWIDTTACLAAEKHA------- 64

Query: 182 RPILLVTASVDRMVVKKPIRVDIDLELTGAVTWVGRSSMEIQLEVTQ 228
             +  VTASVD +  ++  RV   + +   VT    +SMEI ++V  
Sbjct: 65  -GVSCVTASVDDIQFEETARVGQVITIKAKVTRAFSTSMEISIKVMV 110

PyMOL of 3b7k

>3b7k_A Acyl-coenzyme A thioesterase 12; hotdog fold, structural genomics, structural genomics consor SGC, fatty acid metabolism, hydrolase; HET: COA; 2.70A {Homo sapiens} Length = 333	Back alignment and structure

>2qq2_A Cytosolic acyl coenzyme A thioester hydrolase; ACOT7, C-terminal domain, thioesterase, structural genomics, structural genomics consortium, SGC; 2.80A {Homo sapiens} Length = 193	Back alignment and structure

>2q2b_A Cytosolic acyl coenzyme A thioester hydrolase; ACOT7, C-terminal domain; 2.50A {Mus musculus} Length = 179	Back alignment and structure

>1y7u_A Acyl-COA hydrolase; structural genomics, coenzyme A, protein structure initiative, PSI, midwest center for structural GE MCSG; HET: COA; 2.80A {Bacillus cereus} SCOP: d.38.1.1 Length = 174	Back alignment and structure

>2v1o_A Cytosolic acyl coenzyme A thioester hydrolase; acyl-COA thioesterase 7, serine esterase, protein structure, domain duplication, ACOT7, macrophage; HET: COA; 1.78A {Mus musculus} Length = 151	Back alignment and structure

>3d6l_A Putative hydrolase; hot DOG fold, thioesterase, acyl-COA; 2.59A {Campylobacter jejuni} Length = 137	Back alignment and structure

>2eis_A Hypothetical protein TTHB207; COA binding motif, NPPSFA, national project on protein struc functional analyses; HET: COA; 2.10A {Thermus thermophilus} Length = 133	Back alignment and structure

>2gvh_A AGR_L_2016P; 15159470, acyl-COA hydrolase, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.50A {Agrobacterium tumefaciens} SCOP: d.38.1.1 d.38.1.1 Length = 288	Back alignment and structure

>2gvh_A AGR_L_2016P; 15159470, acyl-COA hydrolase, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.50A {Agrobacterium tumefaciens} SCOP: d.38.1.1 d.38.1.1 Length = 288	Back alignment and structure

>1vpm_A Acyl-COA hydrolase; NP_241664.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative hydrolase; HET: COA; 1.66A {Bacillus halodurans} SCOP: d.38.1.1 PDB: 3sps_A Length = 169	Back alignment and structure

>3bjk_A Acyl-COA thioester hydrolase HI0827; hotdog fold, trimer of dimers, YCIA, structural GENO structure 2 function project, S2F; HET: CIT; 1.90A {Haemophilus influenzae rd KW20} PDB: 1yli_A* Length = 153	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		260
4ien_A		163	Putative acyl-COA hydrolase; hot DOG fold; HET: CO	99.88
1y7u_A		174	Acyl-COA hydrolase; structural genomics, coenzyme	99.86
3b7k_A		333	Acyl-coenzyme A thioesterase 12; hotdog fold, stru	99.83
2q2b_A		179	Cytosolic acyl coenzyme A thioester hydrolase; ACO	99.78
2qq2_A		193	Cytosolic acyl coenzyme A thioester hydrolase; ACO	99.78
2v1o_A		151	Cytosolic acyl coenzyme A thioester hydrolase; acy	99.78
1vpm_A		169	Acyl-COA hydrolase; NP_241664.1, structural genomi	99.76
3b7k_A		333	Acyl-coenzyme A thioesterase 12; hotdog fold, stru	99.75
3d6l_A		137	Putative hydrolase; hot DOG fold, thioesterase, ac	99.73
3bjk_A		153	Acyl-COA thioester hydrolase HI0827; hotdog fold,	99.73
2gvh_A		288	AGR_L_2016P; 15159470, acyl-COA hydrolase, structu	99.68
2eis_A		133	Hypothetical protein TTHB207; COA binding motif, N	99.68
4i82_A		137	Putative uncharacterized protein; PAAI/YDII-like,	99.68
2gvh_A		288	AGR_L_2016P; 15159470, acyl-COA hydrolase, structu	99.68
3f5o_A		148	Thioesterase superfamily member 2; hotdog fold, hy	99.65
3e1e_A		141	Thioesterase family protein; structural genomics,	99.65
3s4k_A		144	Putative esterase RV1847/MT1895; seattle structura	99.64
3lbe_A		163	Putative uncharacterized protein SMU.793; hypothet	99.63
1vh9_A		149	P15, hypothetical protein YBDB; structural genomic	99.63
1o0i_A		138	Hypothetical protein HI1161; structural genomics,	99.63
1vh5_A		148	Hypothetical protein YDII; PSI, protein structure	99.61
1zki_A		133	Hypothetical protein PA5202; structural genomics,	99.61
3dkz_A		142	Thioesterase superfamily protein; Q7W9W5, borpa, P	99.6
3lw3_A		145	HP0420 homologue; hotdog-fold, structural genomics	99.6
3e29_A		144	Uncharacterized protein Q7WE92_borbr; Q7WE92 NESG,	99.6
1sc0_A		138	Hypothetical protein HI1161; structural genomics,	99.59
3nwz_A		176	BH2602 protein; structural genomics, PSI-biology,	99.59
4ae8_A		211	Thioesterase superfamily member 4; hydrolase, hotd	99.59
1q4t_A		151	Thioesterase; hot-DOG, hydrolase; HET: 4CO; 1.60A	99.59
3gek_A		146	Putative thioesterase YHDA; structure genomics, NE	99.59
2pim_A		141	Phenylacetic acid degradation-related protein; thi	99.58
2qwz_A		159	Phenylacetic acid degradation-related protein; put	99.56
2fs2_A		151	Phenylacetic acid degradation protein PAAI; operon	99.56
2hbo_A		158	Hypothetical protein (NP_422103.1); thioesterase/t	99.55
3f1t_A		148	Uncharacterized protein Q9I3C8_pseae; PAR319A, NES	99.55
3hdu_A		157	Putative thioesterase; structural genomics, joint	99.53
1wlu_A		136	PAAI protein, phenylacetic acid degradation protei	99.53
2h4u_A		145	Thioesterase superfamily member 2; structural geno	99.53
3e8p_A		164	Uncharacterized protein; X-RAY Q8E9M7 SOR246 NESG	99.52
2ov9_A		216	Hypothetical protein; rhodococcus SP. RHA1, RHA085	99.52
1yoc_A		147	Hypothetical protein PA1835; structural genomics,	99.49
1ixl_A		131	Hypothetical protein PH1136; alpha+beta, hot-DOG-f	99.47
4ae7_A		220	Thioesterase superfamily member 5; hydrolase, hotd	99.46
1sh8_A		154	Hypothetical protein PA5026; structural genomics,	99.44
2prx_A		160	Thioesterase superfamily protein; ZP_00837258.1, s	99.43
3bnv_A		152	CJ0977; virulence factor, hot-DOG fold, flagel unk	99.26
1t82_A		155	Hypothetical acetyltransferase; structural genomic	99.25
2cye_A		133	TTHA1846, putative thioesterase; structural genomi	99.17
2fuj_A		137	Conserved hypothetical protein; structural genomic	99.13
2egj_A		128	Hypothetical protein AQ_1494; structural genomics;	99.09
2oiw_A		136	Putative 4-hydroxybenzoyl-COA thioesterase; struct	99.07
1njk_A		156	Hypothetical protein YBAW; structural genomics, th	99.04
4a0z_A		190	Transcription factor FAPR; lipid homeostasis; HET:	99.04
2pzh_A		135	Hypothetical protein HP_0496; lipid, acyl-COA, bac	99.03
1s5u_A		138	Protein YBGC; structural genomics, hypothetical pr	98.96
2hlj_A		157	Hypothetical protein; putative thioesterase, struc	98.95
2o5u_A		148	Thioesterase; putative thioesterese,, hydrolase; 1	98.95
2gf6_A		135	Conserved hypothetical protein; putative thioester	98.94
1z54_A		132	Probable thioesterase; hypothetical protein, struc	98.94
1lo7_A		141	4-hydroxybenzoyl-COA thioesterase; hot DOG fold, c	98.93
2xem_A		150	DYNE7, TEBC; biosynthetic protein, polyketide bios	98.92
2w3x_A		147	CALE7; hydrolase, hotdog fold, thioesterase, enedi	98.9
2ali_A		158	Hypothetical protein PA2801; structural genomics,	98.9
3ck1_A		150	Putative thioesterase; structural genomics, joint	98.9
2nuj_A		163	Thioesterase superfamily; YP_509914.1, structural	98.9
2f41_A		121	Transcription factor FAPR; 'HOT-DOG' fold, gene re	98.88
2f3x_A		157	Transcription factor FAPR; 'HOT-DOG' fold / malony	98.81
2oaf_A		151	Thioesterase superfamily; YP_508616.1, structural	98.79
2hx5_A		152	Hypothetical protein; thioesterase/thiol ester deh	98.77
3r87_A		135	Putative uncharacterized protein; unknown function	98.71
4i4j_A		159	ACP-polyene thioesterase; structural genomics, PSI	98.68
3lmb_A		165	Uncharacterized protein; protein OLEI01261, unknow	98.66
3hm0_A		167	Probable thioesterase; niaid, ssgcid, decode, UW,	98.51
2cwz_A		141	Thioesterase family protein; structural genomics,	98.41
2q78_A		153	Uncharacterized protein; structural genomics, join	98.23
3bbj_A		272	Putative thioesterase II; structural genomics, joi	98.23
3kuv_A		139	Fluoroacetyl coenzyme A thioesterase; fluoroacetyl	97.84
1iq6_A		134	(R)-hydratase, (R)-specific enoyl-COA hydratase; p	97.77
3cjy_A		259	Putative thioesterase; YP_496845.1, structural gen	97.75
2own_A		262	Putative oleoyl-[acyl-carrier protein] thioestera;	97.65
3qoo_A		138	Uncharacterized protein; structural genomics, PSI-	97.57
2own_A		262	Putative oleoyl-[acyl-carrier protein] thioestera;	97.56
2ess_A		248	Acyl-ACP thioesterase; NP_810988.1, structural gen	97.55
3d6x_A		146	(3R)-hydroxymyristoyl-[acyl-carrier-protein] DEHY;	97.53
4i83_A		152	3-hydroxyacyl-[acyl-carrier-protein] dehydratase;	97.5
1z6b_A		154	Pffabz, fatty acid synthesis protein; malaria, bet	97.46
1u1z_A		168	(3R)-hydroxymyristoyl-[acyl carrier protein] dehyd	97.45
1q6w_A		161	Monoamine oxidase regulatory protein, putative; st	97.38
4h4g_A		160	(3R)-hydroxymyristoyl-[acyl-carrier-protein] DEHY;	97.34
3rqb_A		275	Uncharacterized protein; structural genomics, PSI-	97.34
1tbu_A		118	Peroxisomal acyl-coenzyme A thioester hydrolase 1;	96.96
2b3n_A		159	Hypothetical protein AF1124; structural genomics,	96.94
2gll_A		171	FABZ, (3R)-hydroxymyristoyl-acyl carrier protein d	96.94
4gak_A		250	Acyl-ACP thioesterase; MCSG, PSI-biology, structur	96.86
1c8u_A		285	Acyl-COA thioesterase II; internal repeats, hydrol	96.75
3u0a_A		285	Acyl-COA thioesterase II TESB2; structural genomic	96.62
3ir3_A		148	HTD2, 3-hydroxyacyl-thioester dehydratase 2; struc	96.6
3rd7_A		286	Acyl-COA thioesterase; seattle structur genomics c	96.41
2c2i_A		151	RV0130; hotdog, hydratase, lyase, structural prote	96.03
4ffu_A		176	Oxidase; structural genomics, protein structure in	95.78
3exz_A		154	MAOC-like dehydratase; Q2RSA1_rhort, NESG, RRR103A	95.39
3k67_A		159	Putative dehydratase AF1124; hypothetical protein	94.68
4e3e_A		352	MAOC domain protein dehydratase; structural genomi	94.1
2ess_A		248	Acyl-ACP thioesterase; NP_810988.1, structural gen	93.85
3q62_A		175	3-hydroxydecanoyl-[acyl-carrier-protein] dehydrat;	93.57
2cf2_C		342	Fatty acid synthase, DH domain; transferase, fatty	93.51
4b0b_A		171	3-hydroxydecanoyl-[acyl-carrier-protein] dehydrat;	92.25
2cf2_C		342	Fatty acid synthase, DH domain; transferase, fatty	92.16
2bi0_A		337	Hypothetical protein RV0216; conserved hypothetica	91.42
2bi0_A		337	Hypothetical protein RV0216; conserved hypothetica	88.69
3esi_A		129	Uncharacterized protein; protein from erwinia caro	88.23
4e3e_A		352	MAOC domain protein dehydratase; structural genomi	81.27

>4ien_A Putative acyl-COA hydrolase; hot DOG fold; HET: COA GDP; 2.00A {Neisseria meningitidis}	Back alignment and structure

Probab=99.88  E-value=1.1e-21  Score=164.20  Aligned_cols=115  Identities=23%  Similarity=0.262  Sum_probs=104.4

Q ss_pred             cCCCCCCeEEEEEecccccccCcccCCCCCceeHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEEEEccEEEecccC
Q 039457          122 AKPPSKSRTSILYKFSSDYILKEQYRNPWNEMRMGKLLEDLDALAGTISYKHCCNDDGATRPILLVTASVDRMVVKKPIR  201 (260)
Q Consensus       122 ~r~m~DS~~~~~lp~~sd~~lrp~y~N~~G~LrGGrLLe~LD~lAg~iA~rh~~~~~~~~~P~~iVTAsVD~I~Fl~Pv~  201 (260)
                      ++.+.+++++..+      .++|+|+|++|.+|||.+|+++|.+++++|+++++.        .+||+++|+|+|++|++
T Consensus         7 ~~~~~~~~~~~~~------~v~p~~~n~~G~v~GG~l~~~~D~a~~~~a~~~~~~--------~~vt~~~~~i~F~~Pv~   72 (163)
T 4ien_A            7 QRQLPSHELIMSE------LMMPDTANFSGNVHGGELLLLLDQVAYSCASRYSGN--------YCVTLSVDKVLFKEPIH   72 (163)
T ss_dssp             -CCCCTTEEEEEE------ECCGGGBCTTSBBCHHHHHHHHHHHHHHHHHHHHTS--------CEEEEEEECEECCSCCB
T ss_pred             CCcCCCCEEEEEE------EcCHHHcCCCCcCcHHHHHHHHHHHHHHHHHHHhCC--------cEEEEEEeeEEEeCcCC
Confidence            5677888888866      568999999999999999999999999999999875        58999999999999999


Q ss_pred             CCcEEEEEEEEEEEecCEEEEEEEEEEecCCCCCCceEEEEEEEEEEEccC
Q 039457          202 VDIDLELTGAVTWVGRSSMEIQLEVTQSTQGTPYESRVFVFLAFWAMIGPW  252 (260)
Q Consensus       202 vG~dL~l~G~Vt~tGrSSmEV~V~V~q~~~~~~tg~~~lv~tA~FTfVA~~  252 (260)
                      .|+.|.++|+|+++|++||++.++++.++  ..+++.+++++|+||||+.+
T Consensus        73 ~gd~l~v~a~v~~~Grss~~v~~~v~~~~--~~~g~~~~~a~a~~t~V~vd  121 (163)
T 4ien_A           73 IGDLVTFYAAVNYTGRTSMEIGIRVEAQN--IRTGEIRHTNSCYFTMVAVK  121 (163)
T ss_dssp             TTCEEEEEEEEEEECSSEEEEEEEEEEEC--TTTCCEEEEEEEEEEEEEEE
T ss_pred             CCCEEEEEEEEEEccCCEEEEEEEEEEec--CCCCcEEEEEEEEEEEEEcC
Confidence            99999999999999999999999999876  45677899999999999964

PyMOL of 4ien

>1y7u_A Acyl-COA hydrolase; structural genomics, coenzyme A, protein structure initiative, PSI, midwest center for structural GE MCSG; HET: COA; 2.80A {Bacillus cereus} SCOP: d.38.1.1	Back alignment and structure

>3b7k_A Acyl-coenzyme A thioesterase 12; hotdog fold, structural genomics, structural genomics consor SGC, fatty acid metabolism, hydrolase; HET: COA; 2.70A {Homo sapiens}	Back alignment and structure

>2q2b_A Cytosolic acyl coenzyme A thioester hydrolase; ACOT7, C-terminal domain; 2.50A {Mus musculus}	Back alignment and structure

>2qq2_A Cytosolic acyl coenzyme A thioester hydrolase; ACOT7, C-terminal domain, thioesterase, structural genomics, structural genomics consortium, SGC; 2.80A {Homo sapiens}	Back alignment and structure

>2v1o_A Cytosolic acyl coenzyme A thioester hydrolase; acyl-COA thioesterase 7, serine esterase, protein structure, domain duplication, ACOT7, macrophage; HET: COA; 1.78A {Mus musculus}	Back alignment and structure

>1vpm_A Acyl-COA hydrolase; NP_241664.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative hydrolase; HET: COA; 1.66A {Bacillus halodurans} SCOP: d.38.1.1 PDB: 3sps_A	Back alignment and structure

>3b7k_A Acyl-coenzyme A thioesterase 12; hotdog fold, structural genomics, structural genomics consor SGC, fatty acid metabolism, hydrolase; HET: COA; 2.70A {Homo sapiens}	Back alignment and structure

>3d6l_A Putative hydrolase; hot DOG fold, thioesterase, acyl-COA; 2.59A {Campylobacter jejuni}	Back alignment and structure

>3bjk_A Acyl-COA thioester hydrolase HI0827; hotdog fold, trimer of dimers, YCIA, structural GENO structure 2 function project, S2F; HET: CIT; 1.90A {Haemophilus influenzae rd KW20} PDB: 1yli_A*	Back alignment and structure

>2gvh_A AGR_L_2016P; 15159470, acyl-COA hydrolase, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.50A {Agrobacterium tumefaciens} SCOP: d.38.1.1 d.38.1.1	Back alignment and structure

>2eis_A Hypothetical protein TTHB207; COA binding motif, NPPSFA, national project on protein struc functional analyses; HET: COA; 2.10A {Thermus thermophilus}	Back alignment and structure

>4i82_A Putative uncharacterized protein; PAAI/YDII-like, hot DOG fold, thioesterase, hydrolase; 2.50A {Streptococcus pneumoniae}	Back alignment and structure

>2gvh_A AGR_L_2016P; 15159470, acyl-COA hydrolase, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.50A {Agrobacterium tumefaciens} SCOP: d.38.1.1 d.38.1.1	Back alignment and structure

>3f5o_A Thioesterase superfamily member 2; hotdog fold, hydrolase; HET: UOC COA P6G; 1.70A {Homo sapiens} SCOP: d.38.1.5 PDB: 2f0x_A* 2cy9_A	Back alignment and structure

>3e1e_A Thioesterase family protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Silicibacter pomeroyi}	Back alignment and structure

>3s4k_A Putative esterase RV1847/MT1895; seattle structural genomics center for infectious disease, S hydrolase; 1.70A {Mycobacterium tuberculosis} SCOP: d.38.1.0	Back alignment and structure

>3lbe_A Putative uncharacterized protein SMU.793; hypothetical protein, unknown function; HET: COA; 1.70A {Streptococcus mutans} PDB: 3lbb_A*	Back alignment and structure

>1vh9_A P15, hypothetical protein YBDB; structural genomics, unknown function; 2.15A {Escherichia coli} SCOP: d.38.1.5	Back alignment and structure

>1o0i_A Hypothetical protein HI1161; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 1.70A {Haemophilus influenzae} PDB: 1sc0_A 2b6e_A 3lz7_A	Back alignment and structure

>1vh5_A Hypothetical protein YDII; PSI, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; 1.34A {Escherichia coli} SCOP: d.38.1.5 PDB: 1vi8_A 1sbk_A	Back alignment and structure

>1zki_A Hypothetical protein PA5202; structural genomics, PSI, protein ST initiative, midwest center for structural genomics, MCSG, U function; 1.70A {Pseudomonas aeruginosa} SCOP: d.38.1.5	Back alignment and structure

>3dkz_A Thioesterase superfamily protein; Q7W9W5, borpa, PF03061, NESG, BPR208C, structural genomics, PSI-2, protein structure initiative; 2.40A {Bordetella parapertussis}	Back alignment and structure

>3lw3_A HP0420 homologue; hotdog-fold, structural genomics, unknown function; 1.60A {Helicobacter felis} PDB: 3lwg_A	Back alignment and structure

>3e29_A Uncharacterized protein Q7WE92_borbr; Q7WE92 NESG, structural genomics, PSI-2, Pro structure initiative; 2.40A {Bordetella bronchiseptica} SCOP: d.38.1.0	Back alignment and structure

>1sc0_A Hypothetical protein HI1161; structural genomics, unknown function, PSI-2, protein structure initiative; 1.70A {Haemophilus influenzae} SCOP: d.38.1.5 PDB: 2b6e_A 3lz7_A	Back alignment and structure

>3nwz_A BH2602 protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG, unknown FUN; HET: COA; 2.57A {Bacillus halodurans}	Back alignment and structure

>4ae8_A Thioesterase superfamily member 4; hydrolase, hotdog-fold; 1.59A {Homo sapiens} PDB: 4gah_A*	Back alignment and structure

>1q4t_A Thioesterase; hot-DOG, hydrolase; HET: 4CO; 1.60A {Arthrobacter SP} SCOP: d.38.1.5 PDB: 1q4s_A* 1q4u_A* 3r37_A* 3r36_B* 3r3d_A* 3r34_A* 3r35_A* 3r3f_A* 3r32_A* 3r3a_A* 3r3b_A* 3r3c_A*	Back alignment and structure

>3gek_A Putative thioesterase YHDA; structure genomics, NESG, KR113, Q9CHK5_lacla, lactococcus L YHDA, structural genomics, PSI-2; 2.24A {Lactococcus lactis subsp}	Back alignment and structure

>2pim_A Phenylacetic acid degradation-related protein; thioesterase superfamily, phenylacetic acid degradation-RELA protein; 2.20A {Ralstonia eutropha JMP134}	Back alignment and structure

>2qwz_A Phenylacetic acid degradation-related protein; putative thioesterase, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}	Back alignment and structure

>2fs2_A Phenylacetic acid degradation protein PAAI; operon, structural genomics, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: d.38.1.5 PDB: 1psu_A	Back alignment and structure

>2hbo_A Hypothetical protein (NP_422103.1); thioesterase/thiol ester dehydrase-isomerase fold, structura genomics; HET: MSE PE4; 1.85A {Caulobacter vibrioides} SCOP: d.38.1.5	Back alignment and structure

>3f1t_A Uncharacterized protein Q9I3C8_pseae; PAR319A, NESG, structural genomics, PSI-2, Pro structure initiative; HET: MSE; 2.20A {Pseudomonas aeruginosa}	Back alignment and structure

>3hdu_A Putative thioesterase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 2.50A {Syntrophus aciditrophicus SB}	Back alignment and structure

>1wlu_A PAAI protein, phenylacetic acid degradation protein PAAI; thioesterase, hot DOG fold, S genomics; 1.45A {Thermus thermophilus HB8} SCOP: d.38.1.5 PDB: 1j1y_A 1wlv_A* 1wm6_A 1wn3_A* 2dsl_A	Back alignment and structure

>2h4u_A Thioesterase superfamily member 2; structural genomics, structural genomics consortium, SGC, hydrolase; 2.20A {Homo sapiens} SCOP: d.38.1.5	Back alignment and structure

>3e8p_A Uncharacterized protein; X-RAY Q8E9M7 SOR246 NESG structure, structural genomics, PSI-2, protein structure initiative; 2.30A {Shewanella oneidensis}	Back alignment and structure

>2ov9_A Hypothetical protein; rhodococcus SP. RHA1, RHA08564, structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Rhodococcus SP} SCOP: d.38.1.5	Back alignment and structure

>1yoc_A Hypothetical protein PA1835; structural genomics, PSI, protein structure initiati midwest center for structural genomics, MCSG, sulfur SAD; 1.70A {Pseudomonas aeruginosa} SCOP: d.38.1.5	Back alignment and structure

>1ixl_A Hypothetical protein PH1136; alpha+beta, hot-DOG-fold, structural genomics, unknown funct; 1.94A {Pyrococcus horikoshii} SCOP: d.38.1.5	Back alignment and structure

>4ae7_A Thioesterase superfamily member 5; hydrolase, hotdog-fold; 1.45A {Homo sapiens}	Back alignment and structure

>1sh8_A Hypothetical protein PA5026; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.50A {Pseudomonas aeruginosa} SCOP: d.38.1.5	Back alignment and structure

>2prx_A Thioesterase superfamily protein; ZP_00837258.1, structural joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.50A {Shewanella loihica}	Back alignment and structure

>3bnv_A CJ0977; virulence factor, hot-DOG fold, flagel unknown function; HET: MSE; 2.60A {Campylobacter jejuni}	Back alignment and structure

>1t82_A Hypothetical acetyltransferase; structural genomics, alpha-beta dimeric protein with A fold resembling A hotdog, PSI; 1.70A {Shewanella oneidensis} SCOP: d.38.1.5	Back alignment and structure

>2cye_A TTHA1846, putative thioesterase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: COA; 1.90A {Thermus thermophilus} SCOP: d.38.1.1	Back alignment and structure

>2fuj_A Conserved hypothetical protein; structural genomics, conserved hypot protein, hot DOG domain, acyl-COA thioesterase, hydrolase; 1.70A {Xanthomonas campestris PV} SCOP: d.38.1.1	Back alignment and structure

>2egj_A Hypothetical protein AQ_1494; structural genomics; 1.80A {Aquifex aeolicus} PDB: 2egi_A 2egr_A	Back alignment and structure

>2oiw_A Putative 4-hydroxybenzoyl-COA thioesterase; structural genomics, protein structure initiative, midwest center for structu genomics; 2.00A {Geobacillus stearothermophilus} SCOP: d.38.1.1	Back alignment and structure

>1njk_A Hypothetical protein YBAW; structural genomics, thioesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.90A {Escherichia coli} SCOP: d.38.1.1	Back alignment and structure

>4a0z_A Transcription factor FAPR; lipid homeostasis; HET: MLC; 1.90A {Staphylococcus aureus} PDB: 4a0y_A 4a0x_A* 4a12_A	Back alignment and structure

>2pzh_A Hypothetical protein HP_0496; lipid, acyl-COA, bacterial membrane, TOL-PAL system, thioest hot-DOG fold, hydrolase; 1.70A {Helicobacter pylori}	Back alignment and structure

>1s5u_A Protein YBGC; structural genomics, hypothetical protein, thioesterase fold, PSI, protein structure initiative; 1.70A {Escherichia coli} SCOP: d.38.1.1	Back alignment and structure

>2hlj_A Hypothetical protein; putative thioesterase, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 2.00A {Pseudomonas putida} SCOP: d.38.1.1	Back alignment and structure

>2o5u_A Thioesterase; putative thioesterese,, hydrolase; 1.91A {Pseudomonas aeruginosa} SCOP: d.38.1.1 PDB: 2av9_A 2o6t_A 2o6b_A 2o6u_A	Back alignment and structure

>2gf6_A Conserved hypothetical protein; putative thioesterase, structural genomics, joint center for structural genomics, JCSG; HET: COA; 1.91A {Sulfolobus solfataricus} SCOP: d.38.1.1	Back alignment and structure

>1z54_A Probable thioesterase; hypothetical protein, structural genom NPPSFA, riken structural genomics/proteomics initiative; 2.10A {Thermus thermophilus} SCOP: d.38.1.1	Back alignment and structure

>1lo7_A 4-hydroxybenzoyl-COA thioesterase; hot DOG fold, catalytic mechanism, hydrolase; HET: 4CO; 1.50A {Pseudomonas SP} SCOP: d.38.1.1 PDB: 1bvq_A* 1lo8_A* 1lo9_A*	Back alignment and structure

>2xem_A DYNE7, TEBC; biosynthetic protein, polyketide biosynthesis, enediyne anti agent, thioesterase; HET: SSV; 2.10A {Micromonospora chersina} PDB: 2xfl_A	Back alignment and structure

>2w3x_A CALE7; hydrolase, hotdog fold, thioesterase, enediyne biosynthesis; HET: JEF; 1.75A {Micromonospora echinospora}	Back alignment and structure

>2ali_A Hypothetical protein PA2801; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.75A {Pseudomonas aeruginosa} SCOP: d.38.1.1 PDB: 3qy3_A	Back alignment and structure

>3ck1_A Putative thioesterase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.74A {Ralstonia eutropha}	Back alignment and structure

>2nuj_A Thioesterase superfamily; YP_509914.1, structural genomics, protein structure initiative, joint center for structural G JCSG, hydrolase; 2.00A {Jannaschia} SCOP: d.38.1.1	Back alignment and structure

>2f41_A Transcription factor FAPR; 'HOT-DOG' fold, gene regulation; 2.50A {Bacillus subtilis} SCOP: d.38.1.5	Back alignment and structure

>2f3x_A Transcription factor FAPR; 'HOT-DOG' fold / malonyl-COA complex, gene regulation; HET: MLC; 3.10A {Bacillus subtilis} SCOP: d.38.1.5	Back alignment and structure

>2oaf_A Thioesterase superfamily; YP_508616.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; HET: CIT PGE; 2.00A {Jannaschia SP} SCOP: d.38.1.1	Back alignment and structure

>2hx5_A Hypothetical protein; thioesterase/thiol ester dehydrase-isomerase fold, structura genomics, joint center for structural genomics, JCSG; 1.50A {Prochlorococcus marinus} SCOP: d.38.1.1	Back alignment and structure

>3r87_A Putative uncharacterized protein; unknown function; 1.05A {Photobacterium profundum}	Back alignment and structure

>4i4j_A ACP-polyene thioesterase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: TAR; 2.78A {Streptomyces globisporus}	Back alignment and structure

>3lmb_A Uncharacterized protein; protein OLEI01261, unknown function, chlorobaculum tepidum T structural genomics, PSI2, MCSG; HET: MSE; 2.10A {Oleispira antarctica rb-8} SCOP: d.38.1.0	Back alignment and structure

>3hm0_A Probable thioesterase; niaid, ssgcid, decode, UW, SBRI, infectious disease, rhizobiales, bacteremia, endocarditis, bacillary angiomatosis; 2.50A {Bartonella henselae}	Back alignment and structure

>2cwz_A Thioesterase family protein; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.85A {Thermus thermophilus} SCOP: d.38.1.7	Back alignment and structure

>2q78_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE MLC; 2.20A {Thermotoga maritima MSB8} SCOP: d.38.1.7	Back alignment and structure

>3bbj_A Putative thioesterase II; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; 2.16A {Thermobifida fusca}	Back alignment and structure

>3kuv_A Fluoroacetyl coenzyme A thioesterase; fluoroacetyl-COA thioesterase FLK, hot DOG folding, thioeste hydrolase; 1.50A {Streptomyces cattleya} PDB: 3kuw_A 3kvu_A* 3p2q_A 3p2r_A 3p2s_A 3kv7_A 3kv8_A 3kvz_A* 3kw1_A* 3kx7_A 3kx8_A 3kvi_A 3p3i_A 3p3f_A	Back alignment and structure

>1iq6_A (R)-hydratase, (R)-specific enoyl-COA hydratase; polyhydroxyalkanoate, aeromonas caviae, the hydratase 2 motif, lyase; 1.50A {Aeromonas punctata} SCOP: d.38.1.4	Back alignment and structure

>3cjy_A Putative thioesterase; YP_496845.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE PGE; 1.70A {Novosphingobium aromaticivorans}	Back alignment and structure

>2own_A Putative oleoyl-[acyl-carrier protein] thioestera; NP_784467.1, oleoyl thioesterase (putative); 2.00A {Lactobacillus plantarum} SCOP: d.38.1.8 d.38.1.8	Back alignment and structure

>3qoo_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, hot-DOG superfamily; 1.25A {Thermanaerovibrio acidaminovorans}	Back alignment and structure

>2own_A Putative oleoyl-[acyl-carrier protein] thioestera; NP_784467.1, oleoyl thioesterase (putative); 2.00A {Lactobacillus plantarum} SCOP: d.38.1.8 d.38.1.8	Back alignment and structure

>2ess_A Acyl-ACP thioesterase; NP_810988.1, structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Bacteroides thetaiotaomicron} SCOP: d.38.1.8 d.38.1.8	Back alignment and structure

>3d6x_A (3R)-hydroxymyristoyl-[acyl-carrier-protein] DEHY; FABZ, hot DOG fold, dehydratase, lipid biosynthesis, lipid synthesis, lyase; HET: MSE; 2.59A {Campylobacter jejuni subsp}	Back alignment and structure

>4i83_A 3-hydroxyacyl-[acyl-carrier-protein] dehydratase; FABZ, hot DOG fold, thioesterase, lyase; 2.60A {Neisseria meningitidis}	Back alignment and structure

>1z6b_A Pffabz, fatty acid synthesis protein; malaria, beta-hydroxyacyl-ACP dehydra fatty acid biosynthesis, SAD phasing, lyase; 2.09A {Plasmodium falciparum} SCOP: d.38.1.6 PDB: 3az8_A* 3az9_A* 3aza_A* 3azb_A* 1zhg_A 2oki_A 2okh_A	Back alignment and structure

>1u1z_A (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase; fatty acid biosynthesis, hot DOG fold, lyase; 2.50A {Pseudomonas aeruginosa} SCOP: d.38.1.6	Back alignment and structure

>1q6w_A Monoamine oxidase regulatory protein, putative; structural genomics, nysgxrc T805, hot DOG fold; 2.81A {Archaeoglobus fulgidus} SCOP: d.38.1.4	Back alignment and structure

>4h4g_A (3R)-hydroxymyristoyl-[acyl-carrier-protein] DEHY; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.65A {Burkholderia thailandensis}	Back alignment and structure

>3rqb_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta sandwich; HET: MSE; 2.80A {Alicyclobacillus acidocaldarius subsp}	Back alignment and structure

>1tbu_A Peroxisomal acyl-coenzyme A thioester hydrolase 1; yeast peroxisomal thioesterase, , domain swapping, iodine SOAK, siras; 2.20A {Saccharomyces cerevisiae} SCOP: d.38.1.3	Back alignment and structure

>2b3n_A Hypothetical protein AF1124; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.25A {Archaeoglobus fulgidus} PDB: 2b3m_A 3k67_A	Back alignment and structure

>2gll_A FABZ, (3R)-hydroxymyristoyl-acyl carrier protein dehydratase; lyase; 2.20A {Helicobacter pylori} PDB: 2glm_A* 2glp_A* 2glv_A 3dp1_A* 3cf8_A* 3cf9_A* 3d04_A* 3doy_A* 3doz_A* 3dp0_A* 3b7j_A* 3dp2_A* 3dp3_A* 3ed0_A*	Back alignment and structure

>4gak_A Acyl-ACP thioesterase; MCSG, PSI-biology, structural genomics, midwest center for S genomics, hydrolase; HET: MSE; 1.90A {Spirosoma linguale}	Back alignment and structure

>1c8u_A Acyl-COA thioesterase II; internal repeats, hydrolase; HET: LDA; 1.90A {Escherichia coli} SCOP: d.38.1.3 d.38.1.3	Back alignment and structure

>3u0a_A Acyl-COA thioesterase II TESB2; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, hydrolase; 2.50A {Mycobacterium marinum}	Back alignment and structure

>3ir3_A HTD2, 3-hydroxyacyl-thioester dehydratase 2; structural GENO structural genomics consortium, SGC, lyase; 1.99A {Homo sapiens}	Back alignment and structure

>3rd7_A Acyl-COA thioesterase; seattle structur genomics center for infectious disease, ssgcid, hydrolase; 1.95A {Mycobacterium avium}	Back alignment and structure

>2c2i_A RV0130; hotdog, hydratase, lyase, structural proteomics in europe, spine, structural genomics; 1.8A {Mycobacterium tuberculosis} SCOP: d.38.1.4	Back alignment and structure

>4ffu_A Oxidase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgrc, PS biology; HET: MSE; 1.80A {Sinorhizobium meliloti}	Back alignment and structure

>3exz_A MAOC-like dehydratase; Q2RSA1_rhort, NESG, RRR103A, structur genomics, PSI-2, protein structure initiative; 2.30A {Rhodospirillum rubrum}	Back alignment and structure

>3k67_A Putative dehydratase AF1124; hypothetical protein AF1124, structural genomics, PSI, protein structure initiative; 1.25A {Archaeoglobus fulgidus} PDB: 2b3m_A	Back alignment and structure

>4e3e_A MAOC domain protein dehydratase; structural genomics, protein structure initiative, nysgrc, PSI-biology; 1.90A {Chloroflexus aurantiacus}	Back alignment and structure

>2ess_A Acyl-ACP thioesterase; NP_810988.1, structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Bacteroides thetaiotaomicron} SCOP: d.38.1.8 d.38.1.8	Back alignment and structure

>3q62_A 3-hydroxydecanoyl-[acyl-carrier-protein] dehydrat; structural genomics, center for structural genomics of infec diseases, csgid; HET: MES; 1.40A {Yersinia pseudotuberculosis} SCOP: d.38.1.2 PDB: 1mka_A* 1mkb_A	Back alignment and structure

>2cf2_C Fatty acid synthase, DH domain; transferase, fatty acid metabolism, fatty acid biosynthesis, multienzyme; 4.30A {Sus scrofa} SCOP: d.38.1.2	Back alignment and structure

>4b0b_A 3-hydroxydecanoyl-[acyl-carrier-protein] dehydrat; lyase, fatty acid biosynthesis, bacterial virulence, drug DI; HET: 54F; 1.90A {Pseudomonas aeruginosa} PDB: 4b0c_A* 4b0j_A* 4b8u_A* 4b0i_A*	Back alignment and structure

>2cf2_C Fatty acid synthase, DH domain; transferase, fatty acid metabolism, fatty acid biosynthesis, multienzyme; 4.30A {Sus scrofa} SCOP: d.38.1.2	Back alignment and structure

>2bi0_A Hypothetical protein RV0216; conserved hypothetical, hotdog-fold, structural proteomics in europe, spine, structural genomics; 1.9A {Mycobacterium tuberculosis} SCOP: d.38.1.4 d.38.1.4	Back alignment and structure

>2bi0_A Hypothetical protein RV0216; conserved hypothetical, hotdog-fold, structural proteomics in europe, spine, structural genomics; 1.9A {Mycobacterium tuberculosis} SCOP: d.38.1.4 d.38.1.4	Back alignment and structure

>3esi_A Uncharacterized protein; protein from erwinia carotovora subsp. atroseptica (pectobacterium atrosepticum), structural genomics; 2.50A {Pectobacterium atrosepticum}	Back alignment and structure

>4e3e_A MAOC domain protein dehydratase; structural genomics, protein structure initiative, nysgrc, PSI-biology; 1.90A {Chloroflexus aurantiacus}	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	E-value
Query		260
d1vpma_		155	d.38.1.1 (A:) Acyl-CoA hydrolase BH0798 {Bacillus	1e-13
d2gvha2		116	d.38.1.1 (A:147-262) Probable acyl-CoA hydrolase A	8e-12
d1y7ua1		164	d.38.1.1 (A:8-171) Acyl-coa hydrolase BC2038 {Baci	2e-11
d1ylia1		142	d.38.1.1 (A:11-152) Putative acyl-coa thioester hy	3e-10
d2gvha1		135	d.38.1.1 (A:9-143) Probable acyl-CoA hydrolase AGR	9e-08

>d1vpma_ d.38.1.1 (A:) Acyl-CoA hydrolase BH0798 {Bacillus halodurans [TaxId: 86665]} Length = 155	Back information, alignment and structure


class: Alpha and beta proteins (a+b)
fold: Thioesterase/thiol ester dehydrase-isomerase
superfamily: Thioesterase/thiol ester dehydrase-isomerase
family: 4HBT-like
domain: Acyl-CoA hydrolase BH0798
species: Bacillus halodurans [TaxId: 86665]

 Score = 64.6 bits (157), Expect = 1e-13
 Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 14/107 (13%)

Query: 120 LAAKPPSKSRTSILYKFSSDYILKEQYRNPWNEMRMGKLLEDLDALAGTISYKHCCNDDG 179
           + + P  +SRT          ++     N    +  GK+L  +D +A   + KH  +   
Sbjct: 1   IQSYPVERSRTIQ------TRLVLPPDTNHLGTIFGGKVLAYIDEIAALTAMKHANSA-- 52

Query: 180 ATRPILLVTASVDRMVVKKPIRVDIDLELTGAVTWVGRSSMEIQLEV 226
                 +VTAS+D +  K    V   LEL G VT  GR+SME+ + V
Sbjct: 53  ------VVTASIDSVDFKSSATVGDALELEGFVTHTGRTSMEVYVRV 93

PyMOL of d1vpma_

>d2gvha2 d.38.1.1 (A:147-262) Probable acyl-CoA hydrolase AGR_L_2016 {Agrobacterium tumefaciens [TaxId: 358]} Length = 116	Back information, alignment and structure

>d1y7ua1 d.38.1.1 (A:8-171) Acyl-coa hydrolase BC2038 {Bacillus cereus [TaxId: 1396]} Length = 164	Back information, alignment and structure

>d1ylia1 d.38.1.1 (A:11-152) Putative acyl-coa thioester hydrolase HI0827 {Haemophilus influenzae [TaxId: 727]} Length = 142	Back information, alignment and structure

>d2gvha1 d.38.1.1 (A:9-143) Probable acyl-CoA hydrolase AGR_L_2016 {Agrobacterium tumefaciens [TaxId: 358]} Length = 135	Back information, alignment and structure

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		260
d1y7ua1		164	Acyl-coa hydrolase BC2038 {Bacillus cereus [TaxId:	99.95
d2gvha2		116	Probable acyl-CoA hydrolase AGR_L_2016 {Agrobacter	99.95
d1vpma_		155	Acyl-CoA hydrolase BH0798 {Bacillus halodurans [Ta	99.95
d1ylia1		142	Putative acyl-coa thioester hydrolase HI0827 {Haem	99.94
d2gvha1		135	Probable acyl-CoA hydrolase AGR_L_2016 {Agrobacter	99.94
d2hboa1		142	Hypothetical protein CC3309 {Caulobacter crescentu	99.65
d2fs2a1		131	Phenylacetic acid degradation protein PaaI {Escher	99.65
d2f0xa1		136	Hypothetical protein Them2 {Human (Homo sapiens) [	99.65
d1wlua1		116	Phenylacetic acid degradation protein PaaI {Thermu	99.63
d1zkia1		126	Hypothetical protein PA5202 {Pseudomonas aeruginos	99.62
d1ixla_		130	Hypothetical protein PH1136 {Archaeon Pyrococcus h	99.62
d1sc0a_		137	Hypothetical protein HI1161 {Haemophilus influenza	99.6
d1vh9a_		138	Hypothetical protein YbdB {Escherichia coli [TaxId	99.59
d1vh5a_		138	Hypothetical protein YdiI {Escherichia coli [TaxId	99.55
d1q4ua_		140	4-hydroxybenzoyl CoA thioesterase {Arthrobacter sp	99.51
d2ov9a1		203	Hypothetical protein RHA1_ro05818 {Rhodococcus sp.	99.35
d2f41a1		111	Transcription factor FapR, C-terminal domain {Baci	99.34
d1t82a_		143	Putative thioesterase SO4397 {Shewanella oneidensi	99.18
d1sh8a_		153	Hypothetical protein PA5026 {Pseudomonas aeruginos	99.12
d1yoca1		145	Hypothetical protein PA1835 {Pseudomonas aeruginos	99.07
d2fuja1		118	Hypothetical protein XCC1147 {Xanthomonas campestr	98.75
d2cyea1		132	Probable thioesterase TTHA1846 {Thermus thermophil	98.6
d1lo7a_		140	4-hydroxybenzoyl-CoA thioesterase {Pseudomonas sp.	98.59
d2o5ua1		139	Hypothetical thioesterase PA5185 {Pseudomonas aeru	98.5
d2nuja1		159	Hypothetical protein Jann_1972 {Jannaschia sp. CCS	98.49
d2hx5a1		144	Hypothetical protein PMT2055 {Prochlorococcus mari	98.48
d2oafa1		143	Hypothetical protein Jann0674 {Jannaschia sp. ccs1	98.41
d1njka_		133	Hypothetical protein YbaW {Escherichia coli [TaxId	98.38
d2oiwa1		131	GK1870 orthologue {Bacillus stearothermophilus [Ta	98.37
d1s5ua_		129	Hypothetical protein YbgC {Escherichia coli [TaxId	98.37
d1z54a1		132	Probable thioesterase TTHA0908 {Thermus thermophil	98.36
d2alia1		130	Hypothetical protein PA2801 {Pseudomonas aeruginos	98.3
d2gf6a1		134	Hypothetical protein SSO2295 {Archaeon Sulfolobus	98.23
d2hlja1		156	Hypothetical protein PP0301 {Pseudomonas putida [T	98.22
d2essa1		149	Acyl-ACP thioesterase {Bacteroides thetaiotaomicro	98.04
d2owna1		147	Putative oleoyl-ACP thioesterase LP0708 {Lactobaci	98.02
d2owna2		109	Putative oleoyl-ACP thioesterase LP0708 {Lactobaci	97.59
d2cwza1		138	Hypothetical protein TTHA0967 {Thermus thermophilu	97.52
d1u1za_		145	(3R)-hydroxymyristoyl ACP dehydrase FabZ {Pseudomo	97.36
d1z6ba1		146	(3R)-hydroxymyristoyl ACP dehydrase FabZ {Malaria	96.98
d1tbua1		104	Peroxisomal long-chain acyl-CoA thioesterase 1, TE	96.84
d1c8ua1		114	Thioesterase II (TesB) {Escherichia coli [TaxId: 5	96.57
d2q78a1		130	Uncharacterized protein TM0581 {Thermotoga maritim	96.31
d2bi0a2		152	Hypothetical protein Rv0216/MT0226 {Mycobacterium	96.13
d1q6wa_		151	Monoamine oxidase regulatory protein {Archaeon Arc	96.11
d1iq6a_		132	(R)-specific enoyl-CoA hydratase {Aeromonas caviae	95.97
d2essa2		98	Acyl-ACP thioesterase {Bacteroides thetaiotaomicro	95.46
d2bi0a1		178	Hypothetical protein Rv0216/MT0226 {Mycobacterium	95.07
d2b3na1		154	Hypothetical protein AF1124 {Archaeon Archaeoglobu	94.73
d2c2ia1		149	Hypothetical protein Rv0130 {Mycobacterium tubercu	93.89
d1s9ca2		154	2-enoyl-coa hydratase domain of multifunctional pe	89.36
d1pn2a2		124	2-enoyl-coa hydratase domain of multifunctional pe	88.3
d1c8ua2		171	Thioesterase II (TesB) {Escherichia coli [TaxId: 5	84.91

>d1y7ua1 d.38.1.1 (A:8-171) Acyl-coa hydrolase BC2038 {Bacillus cereus [TaxId: 1396]}	Back information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Thioesterase/thiol ester dehydrase-isomerase
superfamily: Thioesterase/thiol ester dehydrase-isomerase
family: 4HBT-like
domain: Acyl-coa hydrolase BC2038
species: Bacillus cereus [TaxId: 1396]

Probab=99.95  E-value=4.1e-28  Score=203.68  Aligned_cols=116  Identities=23%  Similarity=0.265  Sum_probs=107.3

Q ss_pred             cCCCCCCeEEEEEecccccccCcccCCCCCceeHHHHHHHHHHHHHHHHHHhcCCCCCCCCCceEEEEEEccEEEecccC
Q 039457          122 AKPPSKSRTSILYKFSSDYILKEQYRNPWNEMRMGKLLEDLDALAGTISYKHCCNDDGATRPILLVTASVDRMVVKKPIR  201 (260)
Q Consensus       122 ~r~m~DS~~~~~lp~~sd~~lrp~y~N~~G~LrGGrLLe~LD~lAg~iA~rh~~~~~~~~~P~~iVTAsVD~I~Fl~Pv~  201 (260)
                      .|+++||.++...      .+.|+|+|++|++|||+||+|||++|+++|++|++.        .+||+++|+|+|++|++
T Consensus         2 ~k~~~es~~~~~~------~V~P~~~N~~G~l~GG~ll~~~D~~a~~~a~~~~~~--------~~vtasvd~i~F~~Pv~   67 (164)
T d1y7ua1           2 GKTANESRVFKTS------RVFPTDLNDHNTLFGGKILSEMDMVASISASRHSRK--------ECVTASMDWVDFLHPVR   67 (164)
T ss_dssp             EEEGGGGCEEEEE------ECCGGGBCTTSSBCHHHHHHHHHHHHHHHHHHHHCS--------EEEEEEECCCCCCSCCC
T ss_pred             CccccCceeEEEE------EEChHHcCCCCceeHHHHHHHHHHHHHHHHHHHcCC--------CCceEEEeeEEEeeccC
Confidence            3678888888754      678999999999999999999999999999999987        69999999999999999


Q ss_pred             CCcEEEEEEEEEEEecCEEEEEEEEEEecCCCCCCceEEEEEEEEEEEccCh
Q 039457          202 VDIDLELTGAVTWVGRSSMEIQLEVTQSTQGTPYESRVFVFLAFWAMIGPWS  253 (260)
Q Consensus       202 vG~dL~l~G~Vt~tGrSSmEV~V~V~q~~~~~~tg~~~lv~tA~FTfVA~~~  253 (260)
                      +|++|.+.|+|+|+|+|||+|.|+++.++  ..+++..+++.|+|||||.+.
T Consensus        68 ~Gd~l~~~a~V~~~G~tS~~V~v~v~~~~--~~~~~~~~~~~a~ftfVavd~  117 (164)
T d1y7ua1          68 SSDCVSYESFVIWTGRTSMEVFVKVVSEY--LISGEKRIAATSFVTFVALSK  117 (164)
T ss_dssp             TTCEEEEEEEEEEECSSEEEEEEEEEEEC--TTTCCEEEEEEEEEEEEEECT
T ss_pred             CCceEEEEEEEeecCCceEEEEEEEEEEe--CCCCcEEEEEEEEEEEEEECC
Confidence            99999999999999999999999999987  567889999999999999764

PyMOL of d1y7ua1

>d2gvha2 d.38.1.1 (A:147-262) Probable acyl-CoA hydrolase AGR_L_2016 {Agrobacterium tumefaciens [TaxId: 358]}	Back information, alignment and structure

>d1vpma_ d.38.1.1 (A:) Acyl-CoA hydrolase BH0798 {Bacillus halodurans [TaxId: 86665]}	Back information, alignment and structure

>d1ylia1 d.38.1.1 (A:11-152) Putative acyl-coa thioester hydrolase HI0827 {Haemophilus influenzae [TaxId: 727]}	Back information, alignment and structure

>d2gvha1 d.38.1.1 (A:9-143) Probable acyl-CoA hydrolase AGR_L_2016 {Agrobacterium tumefaciens [TaxId: 358]}	Back information, alignment and structure

>d2hboa1 d.38.1.5 (A:12-153) Hypothetical protein CC3309 {Caulobacter crescentus [TaxId: 155892]}	Back information, alignment and structure

>d2fs2a1 d.38.1.5 (A:1-131) Phenylacetic acid degradation protein PaaI {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d2f0xa1 d.38.1.5 (A:3-138) Hypothetical protein Them2 {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1wlua1 d.38.1.5 (A:2-117) Phenylacetic acid degradation protein PaaI {Thermus thermophilus [TaxId: 274]}	Back information, alignment and structure

>d1zkia1 d.38.1.5 (A:4-129) Hypothetical protein PA5202 {Pseudomonas aeruginosa [TaxId: 287]}	Back information, alignment and structure

>d1ixla_ d.38.1.5 (A:) Hypothetical protein PH1136 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}	Back information, alignment and structure

>d1sc0a_ d.38.1.5 (A:) Hypothetical protein HI1161 {Haemophilus influenzae [TaxId: 727]}	Back information, alignment and structure

>d1vh9a_ d.38.1.5 (A:) Hypothetical protein YbdB {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d1vh5a_ d.38.1.5 (A:) Hypothetical protein YdiI {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d1q4ua_ d.38.1.5 (A:) 4-hydroxybenzoyl CoA thioesterase {Arthrobacter sp., strain su [TaxId: 1667]}	Back information, alignment and structure

>d2ov9a1 d.38.1.5 (A:7-209) Hypothetical protein RHA1_ro05818 {Rhodococcus sp. RHA1 [TaxId: 101510]}	Back information, alignment and structure

>d2f41a1 d.38.1.5 (A:73-183) Transcription factor FapR, C-terminal domain {Bacillus subtilis [TaxId: 1423]}	Back information, alignment and structure

>d1t82a_ d.38.1.5 (A:) Putative thioesterase SO4397 {Shewanella oneidensis [TaxId: 70863]}	Back information, alignment and structure

>d1sh8a_ d.38.1.5 (A:) Hypothetical protein PA5026 {Pseudomonas aeruginosa [TaxId: 287]}	Back information, alignment and structure

>d1yoca1 d.38.1.5 (A:1-145) Hypothetical protein PA1835 {Pseudomonas aeruginosa [TaxId: 287]}	Back information, alignment and structure

>d2fuja1 d.38.1.1 (A:5-122) Hypothetical protein XCC1147 {Xanthomonas campestris pv. campestris [TaxId: 340]}	Back information, alignment and structure

>d2cyea1 d.38.1.1 (A:1-132) Probable thioesterase TTHA1846 {Thermus thermophilus [TaxId: 274]}	Back information, alignment and structure

>d1lo7a_ d.38.1.1 (A:) 4-hydroxybenzoyl-CoA thioesterase {Pseudomonas sp., CBS-3 [TaxId: 306]}	Back information, alignment and structure

>d2o5ua1 d.38.1.1 (A:5-143) Hypothetical thioesterase PA5185 {Pseudomonas aeruginosa [TaxId: 287]}	Back information, alignment and structure

>d2nuja1 d.38.1.1 (A:3-161) Hypothetical protein Jann_1972 {Jannaschia sp. CCS1 [TaxId: 290400]}	Back information, alignment and structure

>d2hx5a1 d.38.1.1 (A:1-144) Hypothetical protein PMT2055 {Prochlorococcus marinus [TaxId: 1219]}	Back information, alignment and structure

>d2oafa1 d.38.1.1 (A:1-143) Hypothetical protein Jann0674 {Jannaschia sp. ccs1 [TaxId: 290400]}	Back information, alignment and structure

>d1njka_ d.38.1.1 (A:) Hypothetical protein YbaW {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d2oiwa1 d.38.1.1 (A:1-131) GK1870 orthologue {Bacillus stearothermophilus [TaxId: 1422]}	Back information, alignment and structure

>d1s5ua_ d.38.1.1 (A:) Hypothetical protein YbgC {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d1z54a1 d.38.1.1 (A:1-132) Probable thioesterase TTHA0908 {Thermus thermophilus [TaxId: 274]}	Back information, alignment and structure

>d2alia1 d.38.1.1 (A:5-134) Hypothetical protein PA2801 {Pseudomonas aeruginosa [TaxId: 287]}	Back information, alignment and structure

>d2gf6a1 d.38.1.1 (A:1-134) Hypothetical protein SSO2295 {Archaeon Sulfolobus solfataricus [TaxId: 2287]}	Back information, alignment and structure

>d2hlja1 d.38.1.1 (A:1-156) Hypothetical protein PP0301 {Pseudomonas putida [TaxId: 303]}	Back information, alignment and structure

>d2essa1 d.38.1.8 (A:1-149) Acyl-ACP thioesterase {Bacteroides thetaiotaomicron [TaxId: 818]}	Back information, alignment and structure

>d2owna1 d.38.1.8 (A:3-149) Putative oleoyl-ACP thioesterase LP0708 {Lactobacillus plantarum [TaxId: 1590]}	Back information, alignment and structure

>d2owna2 d.38.1.8 (A:150-258) Putative oleoyl-ACP thioesterase LP0708 {Lactobacillus plantarum [TaxId: 1590]}	Back information, alignment and structure

>d2cwza1 d.38.1.7 (A:1-138) Hypothetical protein TTHA0967 {Thermus thermophilus [TaxId: 274]}	Back information, alignment and structure

>d1u1za_ d.38.1.6 (A:) (3R)-hydroxymyristoyl ACP dehydrase FabZ {Pseudomonas aeruginosa [TaxId: 287]}	Back information, alignment and structure

>d1z6ba1 d.38.1.6 (A:84-229) (3R)-hydroxymyristoyl ACP dehydrase FabZ {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}	Back information, alignment and structure

>d1tbua1 d.38.1.3 (A:13-116) Peroxisomal long-chain acyl-CoA thioesterase 1, TES1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}	Back information, alignment and structure

>d1c8ua1 d.38.1.3 (A:2-115) Thioesterase II (TesB) {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

>d2q78a1 d.38.1.7 (A:1-130) Uncharacterized protein TM0581 {Thermotoga maritima [TaxId: 2336]}	Back information, alignment and structure

>d2bi0a2 d.38.1.4 (A:186-337) Hypothetical protein Rv0216/MT0226 {Mycobacterium tuberculosis [TaxId: 1773]}	Back information, alignment and structure

>d1q6wa_ d.38.1.4 (A:) Monoamine oxidase regulatory protein {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}	Back information, alignment and structure

>d1iq6a_ d.38.1.4 (A:) (R)-specific enoyl-CoA hydratase {Aeromonas caviae [TaxId: 648]}	Back information, alignment and structure

>d2essa2 d.38.1.8 (A:150-247) Acyl-ACP thioesterase {Bacteroides thetaiotaomicron [TaxId: 818]}	Back information, alignment and structure

>d2bi0a1 d.38.1.4 (A:8-185) Hypothetical protein Rv0216/MT0226 {Mycobacterium tuberculosis [TaxId: 1773]}	Back information, alignment and structure

>d2b3na1 d.38.1.4 (A:6-159) Hypothetical protein AF1124 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}	Back information, alignment and structure

>d2c2ia1 d.38.1.4 (A:2-150) Hypothetical protein Rv0130 {Mycobacterium tuberculosis [TaxId: 1773]}	Back information, alignment and structure

>d1s9ca2 d.38.1.4 (A:10-163) 2-enoyl-coa hydratase domain of multifunctional peroxisomal hydratase-dehydrogenase-epimerase {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1pn2a2 d.38.1.4 (A:152-275) 2-enoyl-coa hydratase domain of multifunctional peroxisomal hydratase-dehydrogenase-epimerase {Yeast (Candida tropicalis) [TaxId: 5482]}	Back information, alignment and structure

>d1c8ua2 d.38.1.3 (A:116-286) Thioesterase II (TesB) {Escherichia coli [TaxId: 562]}	Back information, alignment and structure