Citrus Sinensis ID: 039458

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------18
Protein Sequence
MATQRRSFSCRLLCAIFFTPIFVVGIIFLILWLSLRPHHPKFHVKQFTLQGLGQTTGYLNVNVTVRNPSHRVRICYDSMRGSVYYKDQRVGVVSVFESHYQEPKNTTILHYVYNEPLTLTTQASNNQRTIEIMNDLIKYKGSMWDKRSHRMRATCNVGVGPNGVILAKYKDRQCHVHMS
Secondary Structure (PSIPRED)
ccccccccHHHHHHHHHHHHHHHHHHHHHHEEEEEcccccEEEEEEEEEEccccccEEEEEEEEEEccccEEEEEEccEEEEEEEccEEEEEEcccccEEEccccEEEEEEEEEccccccccccccEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEccccccccccccccEEEEEc
Secondary Structure Prediction (SSPRO)
cccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEEEEccccccccEEEEEEEEcccccEEEEEEEEEEEEEEcccEEccccccccccccccccEEEEEEEcccccccHHHHcccEEEEEEEEEEEEEEEEEEEccEEEEEEEEEEEcccccccccccccccEEEEc
Coil and Loop (DISEMBL)
MATQRRSFSCRLLCAIFFTPIFVVGIIFLILWlslrphhpkfhvkqftlqglgqttgyLNVNVtvrnpshrVRICYdsmrgsvyykdqrvGVVSVFEShyqepknttilhyvynepltlttqasnNQRTIEIMNDLIKYKgsmwdkrshrmratcnvgvgpngvilakykdrqchvhms
Flexible Loop (DISEMBL)
MATQRRSFSCRLLCAIFFTPIFVVGIIFLILWLSLRPHHPKFHVKQFTLQGLGQTTGYLNVNvtvrnpshrVRICYDSMRGSVYYKDQRVGVVSVFESHYQEPKNTTILHYVYNEPLTLttqasnnqrTIEIMNDLIKYKGSMWDKRSHRMRATcnvgvgpngvilakykdrqchvhms
Low Complexity Region (SEG)
MATQRRSFSCRLLCAIFFTPIFVVGIIFLILWLSLRPHHPKFHVKQFTLQGLGQTTGYLNVNVTVRNPSHRVRICYDSMRGSVYYKDQRVGVVSVFESHYQEPKNTTILHYVYNEPLTLTTQASNNQRTIEIMNDLIKYKGSMWDKRSHRMRATCNVGVGPNGVILAKYKDRQCHVHMS
Disordered region (IsUnstruct)
*******FSCRLLCAIFFTPIFVVGIIFLILWLSLRPHHPKFHVKQFTLQGLGQTTGYLNVNVTVRNPSHRVRICYDSMRGSVYYKDQRVGVVSVFESHYQEPKNTTILHYVYNEPLTLTTQASNNQRTIEIMNDLIKYKGSMWDKRSHRMRATCNVGVGPNGVILAKYKDRQC*****
Disordered Region (DISOPRED)
********SCRLLCAIFFTPIFVVGIIFLILWLSLRPHHPKFHVKQFTLQGLGQTTGYLNVNVTVRNPSHRVRICYDSMRGSVYYKDQRVGVVSVFESHYQEPKNTTILHYVY***************TIEIMNDLIKYKGSMWDKRSHRMRATCNVGVGPN*********RQCHVHMS
Disordered Region (DISEMBL)
********SCRLLCAIFFTPIFVVGIIFLILWLSLRPHHPKFHVKQFTLQGLGQTTGYLNVNVTVRNPSHRVRICYDSMRGSVYYKDQRVGVVSVFESHYQEPKNTTILHYVYNEPLTLTTQASNNQRTIEIMNDLIKYKGSMWDKRSHRMRATCNVGVGPNGVILAKYKDRQCHVHMS
Disordered Region (DISPRO)
*****RSFSCRLLCAIFFTPIFVVGIIFLILWLSLRPHHPKFHVKQFTLQGLGQTTGYLNVNVTVRNPSHRVRICYDSMRGSVYYKDQRVGVVSVFESHYQEPKNTTILHYVYNEPLTLTTQASNNQRTIEIMNDLIKYKGSMWDKRSHRMRATCNVGVGPNGVILAKYKDRQCHVHMS
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MATQRRSFSCRLLCAIFFTPIFVVGIIFLILWLSLRPHHPKFHVKQFTLQGLGQTTGYLNVNVTVRNPSHRVRICYDSMRGSVYYKDQRVGVVSVFESHYQEPKNTTILHYVYNEPLTLTTQASNNQRTIEIMNDLIKYKGSMWDKRSHRMRATCNVGVGPNGVILAKYKDRQCHVHMS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	179
356536063	227	PREDICTED: protein NDR1-like [Glycine ma	0.927	0.731	0.398	7e-35
15234663	226	late embryogenesis abundant hydroxyproli	0.955	0.756	0.403	4e-34
356575795	227	PREDICTED: protein NDR1-like [Glycine ma	0.927	0.731	0.388	1e-33
224076389	209	predicted protein [Populus trichocarpa]	0.944	0.808	0.398	3e-33
225444403	215	PREDICTED: protein NDR1 [Vitis vinifera]	0.921	0.767	0.427	7e-33
255555009	192	signal transducer, putative [Ricinus com	0.927	0.864	0.398	3e-32
297813909	226	hypothetical protein ARALYDRAFT_490170 [	0.955	0.756	0.392	3e-32
15220603	224	late embryogenesis abundant hydroxyproli	0.921	0.736	0.347	9e-30
297837255	224	hypothetical protein ARALYDRAFT_893326 [	0.921	0.736	0.347	2e-29
224113907	223	predicted protein [Populus trichocarpa]	0.921	0.739	0.390	2e-28

>gi|356536063|ref|XP_003536560.1| PREDICTED: protein NDR1-like [Glycine max]

 Score =  152 bits (383), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 75/188 (39%), Positives = 113/188 (60%), Gaps = 22/188 (11%)

Query: 10  CRLLCAIFFTPIFVVGIIFLILWLSLRPHHPKFHVKQFTLQGLGQTTGYLNV----NVTV 65
            +++CA F   +F+VG+I  ILWLSLRPH P+FH+++F L GL Q +G+ N      V+ 
Sbjct: 44  SKMICATFLGLLFIVGLITFILWLSLRPHRPRFHIQEFNLPGLTQNSGFENAVITFKVSA 103

Query: 66  RNPSHRVRICYDSMRGSVYYKDQRVGVVSVFESHYQEPKNTTILHYVYNEPLTLTTQASN 125
           RN +  + + Y+SM G+VYY+DQ++G   +    YQ+PKNTT +    +  L+  T   +
Sbjct: 104 RNSNQNIGVYYESMDGAVYYRDQKIGSKPLLYPFYQQPKNTTEV----DGDLSGATLTVS 159

Query: 126 NQRTIEIMND--------------LIKYKGSMWDKRSHRMRATCNVGVGPNGVILAKYKD 171
           +QR  E  +D              +I++K S WD + H M A CNVGVGP+G +L  YKD
Sbjct: 160 SQRWSEFQSDRADGSVVFRLELTSVIRFKISTWDSKRHTMHANCNVGVGPDGSLLTLYKD 219

Query: 172 RQCHVHMS 179
           ++C V+ S
Sbjct: 220 KRCPVYFS 227

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15234663|ref|NP_192431.1| late embryogenesis abundant hydroxyproline-rich glycoprotein [Arabidopsis thaliana] gi|7267282|emb|CAB81064.1| putative protein [Arabidopsis thaliana] gi|332657092|gb|AEE82492.1| late embryogenesis abundant hydroxyproline-rich glycoprotein [Arabidopsis thaliana]

 Score =  149 bits (376), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 79/196 (40%), Positives = 113/196 (57%), Gaps = 25/196 (12%)

Query: 5   RRSFSCRL---LCAIFFTPIFVVGIIFLILWLSLRPHHPKFHVKQFTLQGLGQTTGYLNV 61
           R S S R+   +CA+F   +F VG+I  ILWLSLRPH P+FH++ F +QGL Q TG  N 
Sbjct: 35  RESLSTRISKFICAMFLLVLFFVGVIAFILWLSLRPHRPRFHIQDFVVQGLDQPTGVENA 94

Query: 62  ----NVTVRNPSHRVRICYDSMRGSVYYKDQRVGVVSVFESHYQEPKNTTILHYVYNEPL 117
               NVT+ NP+  + + +DSM GS+YYKDQRVG++ +    +Q+P NTTI+       L
Sbjct: 95  RIAFNVTILNPNQHMGVYFDSMEGSIYYKDQRVGLIPLLNPFFQQPTNTTIV----TGTL 150

Query: 118 TLTTQASNNQRTIEIMND--------------LIKYKGSMWDKRSHRMRATCNVGVGPNG 163
           T  +   N+ R  E  ND               I++K   W  + HRM A CN+ VG +G
Sbjct: 151 TGASLTVNSNRWTEFSNDRAQGTVGFRLDIVSTIRFKLHRWISKHHRMHANCNIVVGRDG 210

Query: 164 VILAKYKDRQCHVHMS 179
           +IL K+  ++C V+ +
Sbjct: 211 LILPKFNHKRCPVYFT 226

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356575795|ref|XP_003556022.1| PREDICTED: protein NDR1-like [Glycine max]

 Score =  148 bits (373), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 73/188 (38%), Positives = 111/188 (59%), Gaps = 22/188 (11%)

Query: 10  CRLLCAIFFTPIFVVGIIFLILWLSLRPHHPKFHVKQFTLQGLGQTTGYLNV----NVTV 65
            +++CA F   +F+VG+I  ILWLSLRPH P+FH+ +F + GL Q +G+ N      V+ 
Sbjct: 44  SKMICATFLGLLFIVGLITFILWLSLRPHRPRFHIHEFNIPGLTQDSGFENAVITFKVSA 103

Query: 66  RNPSHRVRICYDSMRGSVYYKDQRVGVVSVFESHYQEPKNTTILHYVYNEPLTLTTQASN 125
           RN +  + + Y+SM G+VYY+D ++G   +    YQ+PKNTT +    +  L+  T   +
Sbjct: 104 RNSNQNIGVYYESMDGAVYYRDTKIGYTPLLYPFYQQPKNTTEV----DGDLSGATLTVS 159

Query: 126 NQRTIEIMND--------------LIKYKGSMWDKRSHRMRATCNVGVGPNGVILAKYKD 171
           +QR  E  +D              +I++K S WD + H M A CNVGVGP+G +L  YKD
Sbjct: 160 SQRWSEFQSDRADGSVVFRLELTSVIRFKISTWDSKRHTMHANCNVGVGPDGSLLTIYKD 219

Query: 172 RQCHVHMS 179
           ++C V+ S
Sbjct: 220 KRCPVYFS 227

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224076389|ref|XP_002304935.1| predicted protein [Populus trichocarpa] gi|222847899|gb|EEE85446.1| predicted protein [Populus trichocarpa]

 Score =  146 bits (369), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 73/183 (39%), Positives = 108/183 (59%), Gaps = 14/183 (7%)

Query: 11  RLLCAIFFTPIFVVGIIFLILWLSLRPHHPKFHVKQFTLQGLGQTTGYLNV----NVTVR 66
           +++C IF T +F+VGI   I WLSLRPH P+ H++ F + GL Q TG+ N     NVT R
Sbjct: 27  KIICGIFLTLLFIVGIAAFIAWLSLRPHRPRIHIRNFLIPGLDQPTGFDNAEIIFNVTAR 86

Query: 67  NPSHRVRICYDSMRGSVYYKDQRVGVVSVFESHYQEPKNTTILHYVYNEPLTLTTQAS-- 124
           N +  +   YDS+   V+Y++Q +G   + +S YQEPKNTTIL+ V +      T  S  
Sbjct: 87  NSNQVIGYYYDSVEAFVHYRNQVIGYAPLVDSFYQEPKNTTILYKVLSGATLNVTSDSWS 146

Query: 125 --NNQRTIEI------MNDLIKYKGSMWDKRSHRMRATCNVGVGPNGVILAKYKDRQCHV 176
              N R +        +  ++++K S WD + HRM + C +GV P+G ILA YK+++C V
Sbjct: 147 EFRNDRALGTVVFRLDVTGMVRFKVSTWDSKRHRMHSNCEIGVSPDGSILASYKNKRCPV 206

Query: 177 HMS 179
           + S
Sbjct: 207 YFS 209

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225444403|ref|XP_002265341.1| PREDICTED: protein NDR1 [Vitis vinifera] gi|302144059|emb|CBI23164.3| unnamed protein product [Vitis vinifera]

 Score =  145 bits (365), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 79/185 (42%), Positives = 113/185 (61%), Gaps = 20/185 (10%)

Query: 11  RLLCAIFFTPIFVVGIIFLILWLSLRPHHPKFHVKQFTLQGLGQTTGYLNV--NVTVRNP 68
           +++C+IF   + VVG +  ILWLSLRPH P+FH+ +F++  L +  G+  +  NVT RN 
Sbjct: 35  KIICSIFLGLLLVVGFLTFILWLSLRPHRPRFHIHEFSVPNLTEGAGFTEITFNVTARNS 94

Query: 69  SHRVRICYDSMRGSVYYKDQRVGVVSVFESHYQEPKNTTILHYVYNEPLTLTTQASNNQR 128
           +  V I YDSM  S+YYKDQRV   S+    YQEPKNTT+   +Y E L   +   N++R
Sbjct: 95  NQNVGIYYDSMEASIYYKDQRVATTSLLFPFYQEPKNTTV---IYKE-LNGNSITENSER 150

Query: 129 TIEIMNDL--------------IKYKGSMWDKRSHRMRATCNVGVGPNGVILAKYKDRQC 174
           T+E+MND+              I++K S W  + HRM A C+V VG +G IL  YKD++C
Sbjct: 151 TMELMNDVAKGTVVFGLELTSTIRFKVSTWKTKGHRMHANCDVRVGQDGNILGAYKDKRC 210

Query: 175 HVHMS 179
            V+ +
Sbjct: 211 PVYFT 215

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255555009|ref|XP_002518542.1| signal transducer, putative [Ricinus communis] gi|223542387|gb|EEF43929.1| signal transducer, putative [Ricinus communis]

 Score =  143 bits (361), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 75/188 (39%), Positives = 110/188 (58%), Gaps = 22/188 (11%)

Query: 5   RRSFSCRLLCAIFFTPIFVVGIIFLILWLSLRPHHPKFHVKQFTLQGLGQTT----GYLN 60
           R++ + +L  A+  T +F VG+IFLILWLSLRPH PKFH++ F++    Q        + 
Sbjct: 7   RKARAIQLAVAVVCTIVFFVGLIFLILWLSLRPHTPKFHIEDFSISVPSQPNELEIARIT 66

Query: 61  VNVTVRNPSHRVRICYDSMRGSVYYKDQRVGVVSVFESHYQEPKNTTILHYVYNEPLTLT 120
            NVTV N +HR+ I YDS+ GSVYYKDQ VG   + +  YQ PK TT++++     + +T
Sbjct: 67  FNVTVHNGNHRIGILYDSLTGSVYYKDQWVGSTHLLDPFYQGPKKTTLVYHA----VPVT 122

Query: 121 TQASNNQRTIEIMND--------------LIKYKGSMWDKRSHRMRATCNVGVGPNGVIL 166
               N+QR +E +ND               ++Y+  +WD + HR+   C V VG +G+IL
Sbjct: 123 ALMVNSQRWMEFVNDRAKGSVDFRLELISTVRYRTKLWDTKRHRIHPNCIVPVGQDGLIL 182

Query: 167 AKYKDRQC 174
             YK R+C
Sbjct: 183 PSYKHRKC 190

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297813909|ref|XP_002874838.1| hypothetical protein ARALYDRAFT_490170 [Arabidopsis lyrata subsp. lyrata] gi|297320675|gb|EFH51097.1| hypothetical protein ARALYDRAFT_490170 [Arabidopsis lyrata subsp. lyrata]

 Score =  143 bits (360), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 77/196 (39%), Positives = 111/196 (56%), Gaps = 25/196 (12%)

Query: 5   RRSFSCRL---LCAIFFTPIFVVGIIFLILWLSLRPHHPKFHVKQFTLQGLGQTTGYLNV 61
           R S S R+   +CA+F   +F VG+I  ILWLSLRPH P+FH++ F +QGL Q TG  N 
Sbjct: 35  RESLSTRISKFICAMFLLVLFFVGVIAFILWLSLRPHRPRFHIQDFVVQGLDQPTGVENA 94

Query: 62  ----NVTVRNPSHRVRICYDSMRGSVYYKDQRVGVVSVFESHYQEPKNTTILHYVYNEPL 117
               NVT+ NP+  + + +DSM G +YYKDQRVG + +    +Q+P NTTI+       L
Sbjct: 95  RIAFNVTILNPNQHMGVYFDSMDGFIYYKDQRVGSIPLLNPFFQKPTNTTIV----TGTL 150

Query: 118 TLTTQASNNQRTIEIMNDL--------------IKYKGSMWDKRSHRMRATCNVGVGPNG 163
           T  +   N+ R  E  ND               I++K   W  + HRM A C++ VG +G
Sbjct: 151 TGASLTVNSNRWTEFSNDRAQGTVGFRLDIVSNIRFKLHRWISKRHRMHANCDIVVGRDG 210

Query: 164 VILAKYKDRQCHVHMS 179
           +IL K+  ++C V+ +
Sbjct: 211 LILPKFNHKRCPVYFT 226

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15220603|ref|NP_176369.1| late embryogenesis abundant hydroxyproline-rich glycoprotein [Arabidopsis thaliana] gi|4508081|gb|AAD21425.1| Hypothetical protein [Arabidopsis thaliana] gi|332195762|gb|AEE33883.1| late embryogenesis abundant hydroxyproline-rich glycoprotein [Arabidopsis thaliana]

 Score =  135 bits (339), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 65/187 (34%), Positives = 109/187 (58%), Gaps = 22/187 (11%)

Query: 11  RLLCAIFFTPIFVVGIIFLILWLSLRPHHPKFHVKQFTLQGLGQTTGY----LNVNVTVR 66
           +L+CAIF + +  +GII  ILW+SL+PH P+ H++ F++ GL +  G+    ++  +T  
Sbjct: 42  KLICAIFLSLLLCLGIITFILWISLQPHRPRVHIRGFSISGLSRPDGFETSHISFKITAH 101

Query: 67  NPSHRVRICYDSMRGSVYYKDQRVGVVSVFESHYQEPKNTTILHYVYNEPLTLTTQASNN 126
           NP+  V I YDSM GSVYYK++R+G   +    YQ+PKNT+ +    + P      A N 
Sbjct: 102 NPNQNVGIYYDSMEGSVYYKEKRIGSTKLTNPFYQDPKNTSSIDGALSRP----AMAVNK 157

Query: 127 QRTIEIMND--------------LIKYKGSMWDKRSHRMRATCNVGVGPNGVILAKYKDR 172
            R +E+  D              +I++K   W  +SH+M A+C + +G +G++L+  KD+
Sbjct: 158 DRWMEMERDRNQGKIMFRLKVRSMIRFKVYTWHSKSHKMYASCYIEIGWDGMLLSATKDK 217

Query: 173 QCHVHMS 179
           +C V+ +
Sbjct: 218 RCPVYFT 224

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297837255|ref|XP_002886509.1| hypothetical protein ARALYDRAFT_893326 [Arabidopsis lyrata subsp. lyrata] gi|297332350|gb|EFH62768.1| hypothetical protein ARALYDRAFT_893326 [Arabidopsis lyrata subsp. lyrata]

 Score =  133 bits (335), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 65/187 (34%), Positives = 108/187 (57%), Gaps = 22/187 (11%)

Query: 11  RLLCAIFFTPIFVVGIIFLILWLSLRPHHPKFHVKQFTLQGLGQTTGY----LNVNVTVR 66
           +L+CAIF + +  +GII  ILW+SLRPH P+ H++ F++ GL +  G+    ++  +T  
Sbjct: 42  KLICAIFLSLLLCLGIITFILWISLRPHRPRVHIRGFSISGLSRPDGFETSHISFKITAH 101

Query: 67  NPSHRVRICYDSMRGSVYYKDQRVGVVSVFESHYQEPKNTTILHYVYNEPLTLTTQASNN 126
           NP+  V I YDSM GSVYYK++R+G   +    YQ+PKNT+ +      P    T+    
Sbjct: 102 NPNQNVGIYYDSMEGSVYYKEKRIGSTKLTNPFYQDPKNTSWVDGALGRPAMAVTK---- 157

Query: 127 QRTIEIMND--------------LIKYKGSMWDKRSHRMRATCNVGVGPNGVILAKYKDR 172
           +R +E+  D              +I++K   W  +SH+M A C + +G +G++L+  KD+
Sbjct: 158 ERWMEMERDRNQGKIVFRLEVRSVIRFKVYTWHSKSHKMYANCYIEIGWDGMLLSGTKDK 217

Query: 173 QCHVHMS 179
           +C V+ +
Sbjct: 218 KCPVYFT 224

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224113907|ref|XP_002316611.1| predicted protein [Populus trichocarpa] gi|222859676|gb|EEE97223.1| predicted protein [Populus trichocarpa]

 Score =  130 bits (327), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 73/187 (39%), Positives = 100/187 (53%), Gaps = 22/187 (11%)

Query: 11  RLLCAIFFTPIFVVGIIFLILWLSLRPHHPKFHVKQFTLQGLGQTTGYLNV----NVTVR 66
           +++C IF T +FV GI   I WLSLRPH P+  +  F + GL Q  G+ N     NVT R
Sbjct: 41  KIICGIFLTLLFVGGIAVFITWLSLRPHRPRILISNFFIPGLDQPDGFENAEISFNVTAR 100

Query: 67  NPSHRVRICYDSMRGSVYYKDQRVGVVSVFESHYQEPKNTTILHYVYNEPLTLTTQASNN 126
           N +  V   YDS+   VYY+D+ +G   + +S YQEPKNTT L  V    L   T   N+
Sbjct: 101 NANRAVGYYYDSVEAFVYYRDRAIGSTPLVDSFYQEPKNTTNLSKV----LKGATLDVNS 156

Query: 127 QRTIEIMND--------------LIKYKGSMWDKRSHRMRATCNVGVGPNGVILAKYKDR 172
            R      D              +I++K S WD + HRM A C+V VG +G ILA  K++
Sbjct: 157 DRWRVFRKDFARGAVVFRLDVTAMIRFKLSTWDSKRHRMHANCDVAVGRDGSILATSKNK 216

Query: 173 QCHVHMS 179
           +C V+ +
Sbjct: 217 RCLVYFT 223

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	179
TAIR|locus:2115638	226	AT4G05220 "AT4G05220" [Arabido	0.977	0.774	0.416	6.5e-35
TAIR|locus:2195783	224	AT1G61760 "AT1G61760" [Arabido	0.944	0.754	0.349	1e-29
TAIR|locus:2164305	231	NHL3 "AT5G06320" [Arabidopsis	0.558	0.432	0.379	2.7e-13
TAIR|locus:2098363	240	NHL2 "AT3G11650" [Arabidopsis	0.541	0.404	0.398	3.4e-13
TAIR|locus:2062410	238	AT2G35460 "AT2G35460" [Arabido	0.541	0.407	0.336	9.6e-11
TAIR|locus:2039185	227	YLS9 "AT2G35980" [Arabidopsis	0.715	0.563	0.292	2.5e-10
TAIR|locus:2059274	260	AT2G27080 "AT2G27080" [Arabido	0.703	0.484	0.307	6e-10
TAIR|locus:2125157	227	AT4G01410 "AT4G01410" [Arabido	0.435	0.343	0.409	1.2e-09
TAIR|locus:2167489	248	NHL25 "AT5G36970" [Arabidopsis	0.569	0.411	0.342	5.4e-09
TAIR|locus:2018531	252	AT1G65690 "AT1G65690" [Arabido	0.687	0.488	0.326	1.3e-08

TAIR|locus:2115638 AT4G05220 "AT4G05220" [Arabidopsis thaliana (taxid:3702)]

 Score = 378 (138.1 bits), Expect = 6.5e-35, P = 6.5e-35
 Identities = 80/192 (41%), Positives = 118/192 (61%)

Query:     5 RRSFSCRL---LCAIFFTPIFVVGIIFLILWLSLRPHHPKFHVKQFTLQGLGQTTGYLNV 61
             R S S R+   +CA+F   +F VG+I  ILWLSLRPH P+FH++ F +QGL Q TG  N 
Sbjct:    35 RESLSTRISKFICAMFLLVLFFVGVIAFILWLSLRPHRPRFHIQDFVVQGLDQPTGVENA 94

Query:    62 ----NVTVRNPSHRVRICYDSMRGSVYYKDQRVGVVSVFESHYQEPKNTTILH-YVYNEP 116
                 NVT+ NP+  + + +DSM GS+YYKDQRVG++ +    +Q+P NTTI+   +    
Sbjct:    95 RIAFNVTILNPNQHMGVYFDSMEGSIYYKDQRVGLIPLLNPFFQQPTNTTIVTGTLTGAS 154

Query:   117 LTLT----TQASNN--QRTIEIMNDL---IKYKGSMWDKRSHRMRATCNVGVGPNGVILA 167
             LT+     T+ SN+  Q T+    D+   I++K   W  + HRM A CN+ VG +G+IL 
Sbjct:   155 LTVNSNRWTEFSNDRAQGTVGFRLDIVSTIRFKLHRWISKHHRMHANCNIVVGRDGLILP 214

Query:   168 KYKDRQCHVHMS 179
             K+  ++C V+ +
Sbjct:   215 KFNHKRCPVYFT 226

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2195783 AT1G61760 "AT1G61760" [Arabidopsis thaliana (taxid:3702)]

 Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
 Identities = 64/183 (34%), Positives = 108/183 (59%)

Query:    11 RLLCAIFFTPIFVVGIIFLILWLSLRPHHPKFHVKQFTLQGL----GQTTGYLNVNVTVR 66
             +L+CAIF + +  +GII  ILW+SL+PH P+ H++ F++ GL    G  T +++  +T  
Sbjct:    42 KLICAIFLSLLLCLGIITFILWISLQPHRPRVHIRGFSISGLSRPDGFETSHISFKITAH 101

Query:    67 NPSHRVRICYDSMRGSVYYKDQRVGVVSVFESHYQEPKNTTILHYVYNEPLT-------L 119
             NP+  V I YDSM GSVYYK++R+G   +    YQ+PKNT+ +    + P         +
Sbjct:   102 NPNQNVGIYYDSMEGSVYYKEKRIGSTKLTNPFYQDPKNTSSIDGALSRPAMAVNKDRWM 161

Query:   120 TTQASNNQRTIEI---MNDLIKYKGSMWDKRSHRMRATCNVGVGPNGVILAKYKDRQCHV 176
               +   NQ  I     +  +I++K   W  +SH+M A+C + +G +G++L+  KD++C V
Sbjct:   162 EMERDRNQGKIMFRLKVRSMIRFKVYTWHSKSHKMYASCYIEIGWDGMLLSATKDKRCPV 221

Query:   177 HMS 179
             + +
Sbjct:   222 YFT 224

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2164305 NHL3 "AT5G06320" [Arabidopsis thaliana (taxid:3702)]

 Score = 174 (66.3 bits), Expect = 2.7e-13, P = 2.7e-13
 Identities = 41/108 (37%), Positives = 58/108 (53%)

Query:    10 CRLLCAIF---FTPIFVVGIIFLILWLSLRPHHPKFHVK-----QFTLQGLGQTTGYLNV 61
             C +L  IF    T   ++GI  LI+WL  RP+  KFHV      +FTL         L++
Sbjct:    42 CCILSVIFNILITIAVLLGIAALIIWLIFRPNAIKFHVTDAKLTEFTLDPTNNLRYNLDL 101

Query:    62 NVTVRNPSHRVRICYDSMRGSVYYKDQRVGVVSVFESHYQEPKNTTIL 109
             N T+RNP+ R+ + YD +    YY DQR G+ +     YQ  KNTT++
Sbjct:   102 NFTIRNPNRRIGVYYDEIEVRGYYGDQRFGMSNNISKFYQGHKNTTVV 149

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0009617 "response to bacterium" evidence=IEP

GO:0005886 "plasma membrane" evidence=IDA

GO:0042742 "defense response to bacterium" evidence=IMP

GO:0051607 "defense response to virus" evidence=IEP

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

TAIR|locus:2098363 NHL2 "AT3G11650" [Arabidopsis thaliana (taxid:3702)]

 Score = 173 (66.0 bits), Expect = 3.4e-13, P = 3.4e-13
 Identities = 41/103 (39%), Positives = 55/103 (53%)

Query:    12 LLCAIFFTPIFVVGIIFLILWLSLRPHHPKFHVKQFTLQGLG----QTTGY-LNVNVTVR 66
             L+C I      ++G+  LILWL  RP+  KF+V    L            Y L++N T+R
Sbjct:    54 LICNILIAVAVILGVAALILWLIFRPNAVKFYVADANLNRFSFDPNNNLHYSLDLNFTIR 113

Query:    67 NPSHRVRICYDSMRGSVYYKDQRVGVVSVFESHYQEPKNTTIL 109
             NP+ RV + YD    S YY DQR G  +V  S YQ  KNTT++
Sbjct:   114 NPNQRVGVYYDEFSVSGYYGDQRFGSANV-SSFYQGHKNTTVI 155

GO:0003674 "molecular_function" evidence=ND

GO:0009507 "chloroplast" evidence=IDA

GO:0051607 "defense response to virus" evidence=IEP

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2062410 AT2G35460 "AT2G35460" [Arabidopsis thaliana (taxid:3702)]

 Score = 150 (57.9 bits), Expect = 9.6e-11, P = 9.6e-11
 Identities = 35/104 (33%), Positives = 55/104 (52%)

Query:    12 LLCAIFFTPIFVVGIIFLILWLSLRPHHPKFHVKQ-----FTLQGLGQTTGY-LNVNVTV 65
             ++C I    +  +G++ LILW  LRP+  KF V +     F          Y +++N ++
Sbjct:    53 IICNILIGVLVCLGVVALILWFILRPNVVKFQVTEADLTRFEFDPRSHNLHYNISLNFSI 112

Query:    66 RNPSHRVRICYDSMRGSVYYKDQRVGVVSVFESHYQEPKNTTIL 109
             RNP+ R+ I YD +    YY DQR    ++  S YQ  KNTT++
Sbjct:   113 RNPNQRLGIHYDQLEVRGYYGDQRFSAANM-TSFYQGHKNTTVV 155

GO:0005575 "cellular_component" evidence=ND

TAIR|locus:2039185 YLS9 "AT2G35980" [Arabidopsis thaliana (taxid:3702)]

 Score = 146 (56.5 bits), Expect = 2.5e-10, P = 2.5e-10
 Identities = 41/140 (29%), Positives = 69/140 (49%)

Query:    12 LLCAIFFTPIFVVGIIFLILWLSLRPHHPKFHVKQFTLQGLGQTTG-----Y-LNVNVTV 65
             L   +  + I ++G+  LI WL +RP   KFHV   +L     T+      Y L + V V
Sbjct:    40 LFVKVIISLIVILGVAALIFWLIVRPRAIKFHVTDASLTRFDHTSPDNILRYNLALTVPV 99

Query:    66 RNPSHRVRICYDSMRGSVYYKDQRVGVVSVFESHYQEPKNTTILHYVYN-EPLTL----T 120
             RNP+ R+ + YD +    YY+ +R   +++    YQ  KNTT+L   +  + L +     
Sbjct:   100 RNPNKRIGLYYDRIEAHAYYEGKRFSTITL-TPFYQGHKNTTVLTPTFQGQNLVIFNAGQ 158

Query:   121 TQASNNQRTIEIMNDLIKYK 140
             ++  N +R   + N  IK++
Sbjct:   159 SRTLNAERISGVYNIEIKFR 178

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0051707 "response to other organism" evidence=TAS

GO:0009507 "chloroplast" evidence=IDA

GO:0010150 "leaf senescence" evidence=IMP

GO:0051607 "defense response to virus" evidence=IEP

GO:0000165 "MAPK cascade" evidence=RCA

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2059274 AT2G27080 "AT2G27080" [Arabidopsis thaliana (taxid:3702)]

 Score = 145 (56.1 bits), Expect = 6.0e-10, P = 6.0e-10
 Identities = 43/140 (30%), Positives = 71/140 (50%)

Query:    10 CRLLCAIFFTPIFVVGIIFLILWLSLRPHHPKFHVKQFTLQGLG-QTTGYLN--VNVTVR 66
             C  L A+F   I + GI F +L+L  RP  PK+ ++ F++ G+   +T  ++   NVTVR
Sbjct:    76 CSFLAAVFIL-IVLAGISFAVLYLIYRPEAPKYSIEGFSVSGINLNSTSPISPSFNVTVR 134

Query:    67 --NPSHRVRICYDSMRG-SVYYKDQRV--GVVSVFESHYQEPKNTTILHYVYN-EPLTLT 120
               N + ++ + Y+      VYY D  +  GV+ VF   YQ  KN T++  V +   + LT
Sbjct:   135 SRNGNGKIGVYYEKESSVDVYYNDVDISNGVMPVF---YQPAKNVTVVKLVLSGSKIQLT 191

Query:   121 TQASNNQRTIEIMNDLIKYK 140
             +      R  E+    + +K
Sbjct:   192 SGMRKEMRN-EVSKKTVPFK 210

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2125157 AT4G01410 "AT4G01410" [Arabidopsis thaliana (taxid:3702)]

 Score = 140 (54.3 bits), Expect = 1.2e-09, P = 1.2e-09
 Identities = 34/83 (40%), Positives = 43/83 (51%)

Query:    11 RLLCAIFFTPIFVVGIIFLILWLSLRPHHPKFHVKQFTLQGLGQTTGYL-----NVNVTV 65
             R +C   FT + ++GII LILWL  RPH P+  V    +  L  T   L       +V  
Sbjct:    42 RAICGAIFTILVILGIIALILWLVYRPHKPRLTVVGAAIYDLNFTAPPLISTSVQFSVLA 101

Query:    66 RNPSHRVRICYDSMRGSVYYKDQ 88
             RNP+ RV I YD +   V YKDQ
Sbjct:   102 RNPNRRVSIHYDKLSMYVTYKDQ 124

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2167489 NHL25 "AT5G36970" [Arabidopsis thaliana (taxid:3702)]

 Score = 136 (52.9 bits), Expect = 5.4e-09, P = 5.4e-09
 Identities = 39/114 (34%), Positives = 59/114 (51%)

Query:     6 RSFSCRLLC---AIFFTPIFVVGIIFLILWLSLRPHHPKFHVKQFTL------QGLGQTT 56
             RS  CR +C    + F  I +VG I  IL+L  RP  P +++ +  L      Q L  +T
Sbjct:    55 RSCWCRCVCYTLLVLFLLIVIVGAIVGILYLVFRPKFPDYNIDRLQLTRFQLNQDLSLST 114

Query:    57 GYLNVNVTVRNPSHRVRICY-DSMRGSVYYKDQRVGVVSVFESHYQEPKNTTIL 109
              + NV +T +NP+ ++ I Y D  + SV Y   R+   S+    YQ  +NTTI+
Sbjct:   115 AF-NVTITAKNPNEKIGIYYEDGSKISVLYMQTRISNGSL-PKFYQGHENTTII 166

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0009814 "defense response, incompatible interaction" evidence=IEP

GO:0009863 "salicylic acid mediated signaling pathway" evidence=IEP

TAIR|locus:2018531 AT1G65690 "AT1G65690" [Arabidopsis thaliana (taxid:3702)]

 Score = 133 (51.9 bits), Expect = 1.3e-08, P = 1.3e-08
 Identities = 45/138 (32%), Positives = 69/138 (50%)

Query:     4 QRRSFSCRLLCAIF-FTPIFVV--GIIFLILWLSLRPHHPKFHVK--QFTLQGLGQ---- 54
             +RRS  CR  C  F F  + VV  G    IL+L  +P  P + +   Q T   L Q    
Sbjct:    57 KRRSCCCRCFCYTFCFLLLLVVAVGASIGILYLVFKPKLPDYSIDRLQLTRFALNQDSSL 116

Query:    55 TTGYLNVNVTVRNPSHRVRICY-DSMRGSVYYKDQRVGVVSVFESHYQEPKNTTILHYVY 113
             TT + NV +T +NP+ ++ I Y D  + +V+Y + ++   S+    YQ  +NTT+   +Y
Sbjct:   117 TTAF-NVTITAKNPNEKIGIYYEDGSKITVWYMEHQLSNGSL-PKFYQGHENTTV---IY 171

Query:   114 NEPLTLTTQASNNQRTIE 131
              E    T  AS  + T+E
Sbjct:   172 VEMTGQTQNASGLRTTLE 189

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0006865 "amino acid transport" evidence=RCA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	179
PLN03160	219	uncharacterized protein; Provisional	100.0
PF03168	101	LEA_2: Late embryogenesis abundant protein; InterP	99.26
smart00769	100	WHy Water Stress and Hypersensitive response.	98.55
COG5608	161	LEA14-like dessication related protein [Defense me	97.87
PF07092	238	DUF1356: Protein of unknown function (DUF1356); In	97.45
PF12751	387	Vac7: Vacuolar segregation subunit 7; InterPro: IP	97.08
PLN03160	219	uncharacterized protein; Provisional	95.84
COG4698	197	Uncharacterized protein conserved in bacteria [Fun	88.92
PF14155	112	DUF4307: Domain of unknown function (DUF4307)	87.36
COG2332	153	CcmE Cytochrome c-type biogenesis protein CcmE [Po	87.06
TIGR02588	122	conserved hypothetical protein TIGR02588. The func	85.6
PF06072	60	Herpes_US9: Alphaherpesvirus tegument protein US9;	81.48

>PLN03160 uncharacterized protein; Provisional

Probab=100.00  E-value=1.1e-33  Score=223.95  Aligned_cols=168  Identities=18%  Similarity=0.239  Sum_probs=126.7

Q ss_pred             cccceehhhHHHHHHHHHHHHHHhheeeeEeecCCCEEEEeeEEEeeeecCC-----ceEE----EEEEEEcCCCeeEEE
Q 039458            5 RRSFSCRLLCAIFFTPIFVVGIIFLILWLSLRPHHPKFHVKQFTLQGLGQTT-----GYLN----VNVTVRNPSHRVRIC   75 (179)
Q Consensus         5 ~r~~~c~~lc~~l~~~~~l~g~~~li~~l~lrP~~P~~~v~~~~l~~~~~~~-----~~ln----~~l~v~NPN~~~~i~   75 (179)
                      ||++||+|+++++.++++++++++.++|++|||++|+|+|+++++++|++++     ..+|    ++++++|||. ++|+
T Consensus        32 ~r~~~~~c~~~~~a~~l~l~~v~~~l~~~vfrPk~P~~~v~~v~l~~~~~~~~~~~~~~~n~tl~~~v~v~NPN~-~~~~  110 (219)
T PLN03160         32 RRRNCIKCCGCITATLLILATTILVLVFTVFRVKDPVIKMNGVTVTKLELINNTTLRPGTNITLIADVSVKNPNV-ASFK  110 (219)
T ss_pred             ccccceEEHHHHHHHHHHHHHHHHheeeEEEEccCCeEEEEEEEEeeeeeccCCCCceeEEEEEEEEEEEECCCc-eeEE
Confidence            3444444544444445555666777789999999999999999999999852     2334    6778999998 8999


Q ss_pred             EeeeEEEEEECCEEEeccccCCceeeCCCCeEEEEeEeeeeeEEccccCChHHHHHhhcce----------eEEEeeEEE
Q 039458           76 YDSMRGSVYYKDQRVGVVSVFESHYQEPKNTTILHYVYNEPLTLTTQASNNQRTIEIMNDL----------IKYKGSMWD  145 (179)
Q Consensus        76 Y~~~~~~v~Y~g~~lg~~~~lp~f~q~~~~~~~v~~~~~~~l~~~~~~~~~~~~~~l~~d~----------vr~kvg~~~  145 (179)
                      |+++++.++|+|+.+|++. +|+|+|++++++.+++++  .+.+.++.-.++...|+..+.          .+++++.+.
T Consensus       111 Y~~~~~~v~Y~g~~vG~a~-~p~g~~~ar~T~~l~~tv--~~~~~~~~~~~~L~~D~~~G~v~l~~~~~v~gkVkv~~i~  187 (219)
T PLN03160        111 YSNTTTTIYYGGTVVGEAR-TPPGKAKARRTMRMNVTV--DIIPDKILSVPGLLTDISSGLLNMNSYTRIGGKVKILKII  187 (219)
T ss_pred             EcCeEEEEEECCEEEEEEE-cCCcccCCCCeEEEEEEE--EEEeceeccchhHHHHhhCCeEEEEEEEEEEEEEEEEEEE
Confidence            9999999999999999999 999999999999998832  233444332344444444332          455777778


Q ss_pred             EeCeeEEEEeeEEEcCCCceeccccCCCceEecC
Q 039458          146 KRSHRMRATCNVGVGPNGVILAKYKDRQCHVHMS  179 (179)
Q Consensus       146 ~~~~~~~v~C~~~v~~~g~~~~~~~~~~C~v~~~  179 (179)
                      ++++.++++|++.++..++   .+++++|+.+++
T Consensus       188 k~~v~~~v~C~v~V~~~~~---~i~~~~C~~~~~  218 (219)
T PLN03160        188 KKHVVVKMNCTMTVNITSQ---AIQGQKCKRHVD  218 (219)
T ss_pred             EEEEEEEEEeEEEEECCCC---EEeccEeccccc
Confidence            8889999999999986553   467899998753

>PF03168 LEA_2: Late embryogenesis abundant protein; InterPro: IPR004864 Different types of LEA proteins are expressed at different stages of late embryogenesis in higher plant seed embryos and under conditions of dehydration stress [, ]

Probab=99.26  E-value=3.3e-11  Score=83.49  Aligned_cols=66  Identities=26%  Similarity=0.392  Sum_probs=51.3

Q ss_pred             EEEEEcCCCeeEEEEeeeEEEEEECCEEEeccccCCceeeCCCCeEEEEeEeeeeeEEccccCChHHHHHh
Q 039458           62 NVTVRNPSHRVRICYDSMRGSVYYKDQRVGVVSVFESHYQEPKNTTILHYVYNEPLTLTTQASNNQRTIEI  132 (179)
Q Consensus        62 ~l~v~NPN~~~~i~Y~~~~~~v~Y~g~~lg~~~~lp~f~q~~~~~~~v~~~~~~~l~~~~~~~~~~~~~~l  132 (179)
                      +|+++|||. ++++|+++++.++|+|+.+|.+...|+|+|++++++.+..    .+..+...+.......+
T Consensus         1 ~l~v~NPN~-~~i~~~~~~~~v~~~g~~v~~~~~~~~~~i~~~~~~~v~~----~v~~~~~~l~~~l~~~~   66 (101)
T PF03168_consen    1 TLSVRNPNS-FGIRYDSIEYDVYYNGQRVGTGGSLPPFTIPARSSTTVPV----PVSVDYSDLPRLLKDLL   66 (101)
T ss_dssp             EEEEEESSS-S-EEEEEEEEEEEESSSEEEEEEECE-EEESSSCEEEEEE----EEEEEHHHHHHHHHHHH
T ss_pred             CEEEECCCc-eeEEEeCEEEEEEECCEEEECccccCCeEECCCCcEEEEE----EEEEcHHHHHHHHHhhh
Confidence            689999999 9999999999999999999944438999999999999988    66666554433333333

The function of these proteins is unknown. ; PDB: 3BUT_A 1XO8_A 1YYC_A.

>smart00769 WHy Water Stress and Hypersensitive response

Probab=98.55  E-value=1.2e-06  Score=61.17  Aligned_cols=72  Identities=19%  Similarity=0.220  Sum_probs=56.8

Q ss_pred             ceEEEEEEEEcCCCeeEEEEeeeEEEEEECCEEEeccccCC-ceeeCCCCeEEEEeEeeeeeEEccccCChHHHHHhhcc
Q 039458           57 GYLNVNVTVRNPSHRVRICYDSMRGSVYYKDQRVGVVSVFE-SHYQEPKNTTILHYVYNEPLTLTTQASNNQRTIEIMND  135 (179)
Q Consensus        57 ~~ln~~l~v~NPN~~~~i~Y~~~~~~v~Y~g~~lg~~~~lp-~f~q~~~~~~~v~~~~~~~l~~~~~~~~~~~~~~l~~d  135 (179)
                      .++.+++.++|||. +++.|++++..++|+|..+|.+. .+ +...++++++.+.+    .+.. +.........+|...
T Consensus        15 ~~~~l~l~v~NPN~-~~l~~~~~~y~l~~~g~~v~~g~-~~~~~~ipa~~~~~v~v----~~~~-~~~~~~~~~~~l~~~   87 (100)
T smart00769       15 IEIVLKVKVQNPNP-FPIPVNGLSYDLYLNGVELGSGE-IPDSGTLPGNGRTVLDV----PVTV-NLFLAEALIWHIANG   87 (100)
T ss_pred             EEEEEEEEEECCCC-CccccccEEEEEEECCEEEEEEE-cCCCcEECCCCcEEEEE----EEEe-ehhHhHHHHHhhccC
Confidence            46779999999998 89999999999999999999999 65 79999999999888    5555 332233334455443

>COG5608 LEA14-like dessication related protein [Defense mechanisms]

Probab=97.87  E-value=0.0013  Score=48.95  Aligned_cols=99  Identities=15%  Similarity=0.225  Sum_probs=73.1

Q ss_pred             CCCEEEEeeEEEeeeecCCceEEEEEEEEcCCCeeEEEEeeeEEEEEECCEEEeccccCCceeeCCCCeEEEEeEeeeee
Q 039458           38 HHPKFHVKQFTLQGLGQTTGYLNVNVTVRNPSHRVRICYDSMRGSVYYKDQRVGVVSVFESHYQEPKNTTILHYVYNEPL  117 (179)
Q Consensus        38 ~~P~~~v~~~~l~~~~~~~~~ln~~l~v~NPN~~~~i~Y~~~~~~v~Y~g~~lg~~~~lp~f~q~~~~~~~v~~~~~~~l  117 (179)
                      +.|.+.--.+..-....+...+-.++.++|||. +.+--..++..++-+|..+|++..+.++..++++...+++    .+
T Consensus        31 ~~p~ve~~ka~wGkvt~s~~EiV~t~KiyNPN~-fPipVtgl~y~vymN~Iki~eG~~~k~~~v~p~S~~tvdv----~l  105 (161)
T COG5608          31 KKPGVESMKAKWGKVTNSETEIVGTLKIYNPNP-FPIPVTGLQYAVYMNDIKIGEGEILKGTTVPPNSRETVDV----PL  105 (161)
T ss_pred             CCCCceEEEEEEEEEeccceEEEEEEEecCCCC-cceeeeceEEEEEEcceEeeccccccceEECCCCeEEEEE----EE
Confidence            667766666666555444446779999999998 8999999999999999999999866789999999999988    66


Q ss_pred             EEccccCChHHHHHhhcce---eEEEe
Q 039458          118 TLTTQASNNQRTIEIMNDL---IKYKG  141 (179)
Q Consensus       118 ~~~~~~~~~~~~~~l~~d~---vr~kv  141 (179)
                      .-+.-.+...-...+....   +|+++
T Consensus       106 ~~d~~~~ke~w~~hi~ngErs~Ir~~i  132 (161)
T COG5608         106 RLDNSKIKEWWVTHIENGERSTIRVRI  132 (161)
T ss_pred             EEehHHHHHHHHHHhhccCcccEEEEE
Confidence            6554444444344554332   55554

>PF07092 DUF1356: Protein of unknown function (DUF1356); InterPro: IPR009790 This family consists of several hypothetical mammalian proteins of around 250 residues in length

Probab=97.45  E-value=0.0018  Score=51.79  Aligned_cols=96  Identities=14%  Similarity=0.225  Sum_probs=59.4

Q ss_pred             ehhhHHHHHHHHHHHHHHhheeeeEeecCCCEEEEeeEEEeeeec--CCce--EE--EEEEEEcCCCeeEEEEeeeEEEE
Q 039458           10 CRLLCAIFFTPIFVVGIIFLILWLSLRPHHPKFHVKQFTLQGLGQ--TTGY--LN--VNVTVRNPSHRVRICYDSMRGSV   83 (179)
Q Consensus        10 c~~lc~~l~~~~~l~g~~~li~~l~lrP~~P~~~v~~~~l~~~~~--~~~~--ln--~~l~v~NPN~~~~i~Y~~~~~~v   83 (179)
                      +..+++++++-+++.|+++++++    ||.-.++-.++......+  +.++  ++  -.|-++|||. ..+.-.++.+++
T Consensus        75 klyV~~sV~~CLl~~~L~iFFLf----PRsV~v~~~gv~s~~V~f~~~~~~v~l~itn~lNIsN~NF-y~V~Vt~~s~qv  149 (238)
T PF07092_consen   75 KLYVFLSVLLCLLLSGLVIFFLF----PRSVTVSPVGVKSVTVSFNPDKSTVQLNITNTLNISNPNF-YPVTVTNLSIQV  149 (238)
T ss_pred             EEEeeHHHHHHHHHHHheEEEEe----CcEEEEecCcEEEEEEEEeCCCCEEEEEEEEEEEccCCCE-EEEEEEeEEEEE
Confidence            33444444433444444444444    776555444443333333  3333  34  6678999997 899999999999


Q ss_pred             EECCEEEeccccCC-ceeeCCCCeEEEEe
Q 039458           84 YYKDQRVGVVSVFE-SHYQEPKNTTILHY  111 (179)
Q Consensus        84 ~Y~g~~lg~~~~lp-~f~q~~~~~~~v~~  111 (179)
                      .|....+|.+. .. ....++++.+.+..
T Consensus       150 ~~~~~VVG~~~-~~~~~~I~Prs~~q~~~  177 (238)
T PF07092_consen  150 LYMKTVVGKGK-NSNITVIGPRSSKQVNY  177 (238)
T ss_pred             EEEEeEEeeeE-ecceEEecccCCceEEE
Confidence            99999999887 43 23556666665655

The function of this family is unknown.

>PF12751 Vac7: Vacuolar segregation subunit 7; InterPro: IPR024260 Vac7 is localised at the vacuole membrane, a location which is consistent with its involvement in vacuole morphology and inheritance []

Probab=97.08  E-value=0.002  Score=54.70  Aligned_cols=34  Identities=24%  Similarity=0.437  Sum_probs=28.8

Q ss_pred             eEEEEEEEEcCCCeeEEEEeeeEEEEEECCEEEec
Q 039458           58 YLNVNVTVRNPSHRVRICYDSMRGSVYYKDQRVGV   92 (179)
Q Consensus        58 ~ln~~l~v~NPN~~~~i~Y~~~~~~v~Y~g~~lg~   92 (179)
                      -|++++.+.|||- +.|..++.++.++-+-.-+|.
T Consensus       349 mfdl~V~A~NPn~-~~V~I~d~dldIFAKS~yvg~  382 (387)
T PF12751_consen  349 MFDLTVEAFNPNW-FTVTIDDMDLDIFAKSRYVGT  382 (387)
T ss_pred             EEeeEEEEECCCe-EEEEeccceeeeEecCCccCc
Confidence            3689999999998 899999999999977655554

Vac7 has been shown to function as an upstream regulator of the Fab1 lipid kinase pathway []. The Fab1 lipid pathway is important for correct regulation of membrane trafficking events.

>PLN03160 uncharacterized protein; Provisional

Probab=95.84  E-value=0.038  Score=43.94  Aligned_cols=98  Identities=12%  Similarity=0.107  Sum_probs=56.8

Q ss_pred             CCccccceehhhHHHHHHHHHHHHHHhheeeeEeecC--CCEEEEeeEEEe-------eeecC--------CceEEEEEE
Q 039458            2 ATQRRSFSCRLLCAIFFTPIFVVGIIFLILWLSLRPH--HPKFHVKQFTLQ-------GLGQT--------TGYLNVNVT   64 (179)
Q Consensus         2 ~~k~r~~~c~~lc~~l~~~~~l~g~~~li~~l~lrP~--~P~~~v~~~~l~-------~~~~~--------~~~ln~~l~   64 (179)
                      .++++.+||.|+|++++++++++++++++++=-=.|+  .-.++++++.+.       .+|++        |+.. +.+.
T Consensus        32 ~r~~~~~c~~~~~a~~l~l~~v~~~l~~~vfrPk~P~~~v~~v~l~~~~~~~~~~~~~~~n~tl~~~v~v~NPN~-~~~~  110 (219)
T PLN03160         32 RRRNCIKCCGCITATLLILATTILVLVFTVFRVKDPVIKMNGVTVTKLELINNTTLRPGTNITLIADVSVKNPNV-ASFK  110 (219)
T ss_pred             ccccceEEHHHHHHHHHHHHHHHHheeeEEEEccCCeEEEEEEEEeeeeeccCCCCceeEEEEEEEEEEEECCCc-eeEE
Confidence            3788999999999988887777777777765555564  334555554432       12221        3322 4555


Q ss_pred             EEcCCCeeEEEEeeeEEEEEECCEEEeccccCCceeeCCCCeE
Q 039458           65 VRNPSHRVRICYDSMRGSVYYKDQRVGVVSVFESHYQEPKNTT  107 (179)
Q Consensus        65 v~NPN~~~~i~Y~~~~~~v~Y~g~~lg~~~~lp~f~q~~~~~~  107 (179)
                      ..  |....++|++..+.-    ..+..+. .|++.+...+.+
T Consensus       111 Y~--~~~~~v~Y~g~~vG~----a~~p~g~-~~ar~T~~l~~t  146 (219)
T PLN03160        111 YS--NTTTTIYYGGTVVGE----ARTPPGK-AKARRTMRMNVT  146 (219)
T ss_pred             Ec--CeEEEEEECCEEEEE----EEcCCcc-cCCCCeEEEEEE
Confidence            54  334788997754432    2233444 455544444444

>COG4698 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=88.92  E-value=0.37  Score=37.00  Aligned_cols=47  Identities=17%  Similarity=0.260  Sum_probs=29.8

Q ss_pred             CCCccccc-eehhhHHHHHHHHHHHHHHhheeeeEeecCCCEEEEeeEEE
Q 039458            1 MATQRRSF-SCRLLCAIFFTPIFVVGIIFLILWLSLRPHHPKFHVKQFTL   49 (179)
Q Consensus         1 ~~~k~r~~-~c~~lc~~l~~~~~l~g~~~li~~l~lrP~~P~~~v~~~~l   49 (179)
                      |++|+... -++.+|.+++++..+++  ++++-+++.|++|..++.+++=
T Consensus         1 ~~~kk~~~n~WKw~f~iLLAln~l~~--~~i~~~vlsp~ee~t~~~~a~~   48 (197)
T COG4698           1 MFRKKGTLNYWKWLFFILLALNTLLA--VLIALFVLSPREEPTHLEDASE   48 (197)
T ss_pred             CCCccccccHHHHHHHHHHHHHHHHH--HHhheeeccCCCCCchhhccCc
Confidence            44444333 47777776665554433  5566678899997777776654

>PF14155 DUF4307: Domain of unknown function (DUF4307)

Probab=87.36  E-value=8.3  Score=27.28  Aligned_cols=66  Identities=12%  Similarity=0.192  Sum_probs=34.1

Q ss_pred             HhheeeeEee-cCCCEEEEeeEEEeeeec-CCceEEEEEEEEcCCCeeEEEEeeeEEEEEECCEEEeccc-cCCc
Q 039458           27 IFLILWLSLR-PHHPKFHVKQFTLQGLGQ-TTGYLNVNVTVRNPSHRVRICYDSMRGSVYYKDQRVGVVS-VFES   98 (179)
Q Consensus        27 ~~li~~l~lr-P~~P~~~v~~~~l~~~~~-~~~~ln~~l~v~NPN~~~~i~Y~~~~~~v~Y~g~~lg~~~-~lp~   98 (179)
                      ++++.|+.++ ...|.++   .....|.+ ++.++.+++++.-|-. ...+-  .--...|.+.++|... .+||
T Consensus        18 ~~~~~w~~~~~~~~~~v~---~~~~gf~vv~d~~v~v~f~Vtr~~~-~~a~C--~VrA~~~d~aeVGrreV~vp~   86 (112)
T PF14155_consen   18 GAVVAWFGYSQFGSPPVS---AEVIGFEVVDDSTVEVTFDVTRDPG-RPAVC--IVRALDYDGAEVGRREVLVPP   86 (112)
T ss_pred             HHHHhHhhhhhccCCCce---EEEEEEEECCCCEEEEEEEEEECCC-CCEEE--EEEEEeCCCCEEEEEEEEECC
Confidence            3444555444 4445553   33444554 3467777777665522 22222  1122357888888765 2565

>COG2332 CcmE Cytochrome c-type biogenesis protein CcmE [Posttranslational modification, protein turnover, chaperones]

Probab=87.06  E-value=6.6  Score=29.36  Aligned_cols=38  Identities=21%  Similarity=0.374  Sum_probs=26.2

Q ss_pred             ceEEEEEEEEcCCCeeEEEEeeeEEEEEECCEE-Eeccc
Q 039458           57 GYLNVNVTVRNPSHRVRICYDSMRGSVYYKDQR-VGVVS   94 (179)
Q Consensus        57 ~~ln~~l~v~NPN~~~~i~Y~~~~~~v~Y~g~~-lg~~~   94 (179)
                      ..+++.+.+.--|.++.+.|..+-=.++=+|+. ++.++
T Consensus        70 ~~~~v~F~vtD~~~~v~V~Y~GiLPDLFREGQgVVa~G~  108 (153)
T COG2332          70 GSLKVSFVVTDGNKSVTVSYEGILPDLFREGQGVVAEGQ  108 (153)
T ss_pred             CCcEEEEEEecCCceEEEEEeccCchhhhcCCeEEEEEE
Confidence            456677777777777888888776677666664 44454

>TIGR02588 conserved hypothetical protein TIGR02588

Probab=85.60  E-value=2.3  Score=30.66  Aligned_cols=52  Identities=13%  Similarity=0.197  Sum_probs=33.2

Q ss_pred             HHHHHHHHHhheeeeEe--ecCCCEEEEeeEEEeeeecCCceEEEEEEEEcCCCee
Q 039458           19 TPIFVVGIIFLILWLSL--RPHHPKFHVKQFTLQGLGQTTGYLNVNVTVRNPSHRV   72 (179)
Q Consensus        19 ~~~~l~g~~~li~~l~l--rP~~P~~~v~~~~l~~~~~~~~~ln~~l~v~NPN~~~   72 (179)
                      ..+++++++.+++|.++  +++.|.+.+......+-.  .+.+-+-++++|--...
T Consensus        11 s~~ill~viglv~y~~l~~~~~pp~l~v~~~~~~r~~--~gqyyVpF~V~N~gg~T   64 (122)
T TIGR02588        11 STLILAAMFGLVAYDWLRYSNKAAVLEVAPAEVERMQ--TGQYYVPFAIHNLGGTT   64 (122)
T ss_pred             HHHHHHHHHHHHHHHhhccCCCCCeEEEeehheeEEe--CCEEEEEEEEEeCCCcE
Confidence            34455566666665544  667899988776654322  34567778888876643

The function of this protein is unknown. It is always found as part of a two-gene operon with TIGR02587, a protein that appears to span the membrane seven times. It is found in Nostoc sp. PCC 7120, Agrobacterium tumefaciens, Sinorhizobium meliloti, and Gloeobacter violaceus, so far, all of which are bacterial.

>PF06072 Herpes_US9: Alphaherpesvirus tegument protein US9; InterPro: IPR009278 This family consists of several US9 and related proteins from the Alphaherpesviruses

Probab=81.48  E-value=0.57  Score=29.33  Aligned_cols=8  Identities=50%  Similarity=0.978  Sum_probs=4.2

Q ss_pred             ccccceeh
Q 039458            4 QRRSFSCR   11 (179)
Q Consensus         4 k~r~~~c~   11 (179)
                      +||+|+|.
T Consensus        26 r~RrRrc~   33 (60)
T PF06072_consen   26 RRRRRRCR   33 (60)
T ss_pred             HHHHHHHH
Confidence            44555554

The function of the US9 protein is unknown although in Bovine herpesvirus 5 Us9 is essential for the anterograde spread of the virus from the olfactory mucosa to the bulb [].; GO: 0019033 viral tegument

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	179
1yyc_A	174	LEA protein, putative late embryogenesis abundant	98.36
1xo8_A	151	AT1G01470; structural genomics, protein structure	98.14
3but_A	136	Uncharacterized protein AF_0446; lipid binding pro	97.95

>1yyc_A LEA protein, putative late embryogenesis abundant protein; structural genomics, protein structure initiative, CESG; NMR {Arabidopsis thaliana}

Probab=98.36  E-value=1.9e-06  Score=65.03  Aligned_cols=77  Identities=16%  Similarity=0.197  Sum_probs=69.0

Q ss_pred             CCCEEEEeeEEEeeeecCCceEEEEEEEEcCCCeeEEEEeeeEEEEEECCEEEeccccCC-ceeeCCCCeEEEEeEeeee
Q 039458           38 HHPKFHVKQFTLQGLGQTTGYLNVNVTVRNPSHRVRICYDSMRGSVYYKDQRVGVVSVFE-SHYQEPKNTTILHYVYNEP  116 (179)
Q Consensus        38 ~~P~~~v~~~~l~~~~~~~~~ln~~l~v~NPN~~~~i~Y~~~~~~v~Y~g~~lg~~~~lp-~f~q~~~~~~~v~~~~~~~  116 (179)
                      +.|.+++.++++..++.....+.+.|+++|||. ..+.+.+++..+.-+|.+++++. .+ ++..++++++.+.+    .
T Consensus        43 ~~PeV~v~~v~~~~~~l~~~~~~l~LrV~NPN~-~pLpi~gi~Y~L~vnG~~lasG~-s~~~~tIpa~g~~~v~V----p  116 (174)
T 1yyc_A           43 PTPEATVDDVDFKGVTRDGVDYHAKVSVKNPYS-QSIPICQISYILKSATRTIASGT-IPDPGSLVGSGTTVLDV----P  116 (174)
T ss_dssp             CCCEEEEEEEEEEEECSSSEEEEEEEEEEECSS-SCCBCCSEEEEEEESSSCEEEEE-ESCCCBCCSSEEEEEEE----E
T ss_pred             CCCEEEEEEeEEeccccceEEEEEEEEEECCCC-CCccccceEEEEEECCEEEEEEe-cCCCceECCCCcEEEEE----E
Confidence            679999999999999888778999999999998 89999999999999999999998 55 68899999999988    5


Q ss_pred             eEEc
Q 039458          117 LTLT  120 (179)
Q Consensus       117 l~~~  120 (179)
                      ++..
T Consensus       117 v~v~  120 (174)
T 1yyc_A          117 VKVA  120 (174)
T ss_dssp             EEES
T ss_pred             EEEE
Confidence            5554

>1xo8_A AT1G01470; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, unknown function; NMR {Arabidopsis thaliana} SCOP: b.1.25.1

Probab=98.14  E-value=1.2e-06  Score=64.73  Aligned_cols=72  Identities=17%  Similarity=0.146  Sum_probs=65.2

Q ss_pred             CCCEEEEeeEEEeeeecCCceEEEEEEEEcCCCeeEEEEeeeEEEEEECCEEEeccccCC-ceeeCCCCeEEEEe
Q 039458           38 HHPKFHVKQFTLQGLGQTTGYLNVNVTVRNPSHRVRICYDSMRGSVYYKDQRVGVVSVFE-SHYQEPKNTTILHY  111 (179)
Q Consensus        38 ~~P~~~v~~~~l~~~~~~~~~ln~~l~v~NPN~~~~i~Y~~~~~~v~Y~g~~lg~~~~lp-~f~q~~~~~~~v~~  111 (179)
                      +.|++++.++++..++.....+.+.|+++|||. ..+.+.+++..+.-+|.+++++. .+ ++..++++++.+.+
T Consensus        20 ~~P~v~v~~v~~~~~~~~~~~~~~~l~V~NPN~-~~lpi~gi~y~l~vng~~lasG~-~~~~~~ipa~g~~~v~v   92 (151)
T 1xo8_A           20 PKPEGSVTDVDLKDVNRDSVEYLAKVSVTNPYS-HSIPICEISFTFHSAGREIGKGK-IPDPGSLKAKDMTALDI   92 (151)
T ss_dssp             CSCCCBCSEEEECCCTTTEECEEEEEEEECSSS-SCCCCEEEEEEEESSSSCEEEEE-EEECCCCSSSSEEEEEE
T ss_pred             CCCEEEEEEeEEeccCcceeEEEEEEEEECCCC-CCcccccEEEEEEECCEEEEEEe-cCCCcEECCCCcEEEEE
Confidence            679999999999888877678999999999998 89999999999999999999998 54 68889999999987

>3but_A Uncharacterized protein AF_0446; lipid binding protein, beta barrel, protein structure initia PSI-2; 1.91A {Archaeoglobus fulgidus dsm 4304}

Probab=97.95  E-value=0.0004  Score=50.20  Aligned_cols=73  Identities=18%  Similarity=0.130  Sum_probs=60.3

Q ss_pred             eEEEEEEEEcCCCeeEEEEeeeEEEEEECCEEEeccccCCceeeCCCCeEEEEeEeeeeeEEccccCChHHHHHhhcc
Q 039458           58 YLNVNVTVRNPSHRVRICYDSMRGSVYYKDQRVGVVSVFESHYQEPKNTTILHYVYNEPLTLTTQASNNQRTIEIMND  135 (179)
Q Consensus        58 ~ln~~l~v~NPN~~~~i~Y~~~~~~v~Y~g~~lg~~~~lp~f~q~~~~~~~v~~~~~~~l~~~~~~~~~~~~~~l~~d  135 (179)
                      .+.+.|.+.|||. ..+.++.+...++.+|.++|++.+...+..++.+.+.+.+    .+..+.-.+.+.....++.+
T Consensus        19 ~~~~~l~V~NPN~-~~l~i~gl~y~v~lng~~la~G~s~~~~~I~~~g~~~v~v----~~~i~~~~l~~~~~~hi~ng   91 (136)
T 3but_A           19 EIVALAKVRNEDV-VPIVVSGYHYTIEMNGVKVADGYENSPVTVKPASATTLKF----SLRLNNSFLREWWVTHIANG   91 (136)
T ss_dssp             EEEEEEEEECCSS-SCEEEEEEEEEEEETTEEEEEEEECCCEEECTTCEEEEEE----EEEEEHHHHTTHHHHHHHTT
T ss_pred             EEEEEEEEeCCCC-cceeeeceEEEEEECCEEEEeeeecCceEECCCCcEEEEE----EEEEchHHhHHHHHHHhhcC
Confidence            4679999999998 8999999999999999999999756789999999888888    67666655555555566554

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	179
d1xo8a_	151	Putative dessication related protein LEA14 {Thale	98.3

>d1xo8a_ b.1.25.1 (A:) Putative dessication related protein LEA14 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: LEA14-like
family: LEA14-like
domain: Putative dessication related protein LEA14
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.30  E-value=2.7e-07  Score=66.41  Aligned_cols=75  Identities=16%  Similarity=0.133  Sum_probs=66.8

Q ss_pred             ecCCCEEEEeeEEEeeeecCCceEEEEEEEEcCCCeeEEEEeeeEEEEEECCEEEeccccCCceeeCCCCeEEEEe
Q 039458           36 RPHHPKFHVKQFTLQGLGQTTGYLNVNVTVRNPSHRVRICYDSMRGSVYYKDQRVGVVSVFESHYQEPKNTTILHY  111 (179)
Q Consensus        36 rP~~P~~~v~~~~l~~~~~~~~~ln~~l~v~NPN~~~~i~Y~~~~~~v~Y~g~~lg~~~~lp~f~q~~~~~~~v~~  111 (179)
                      +=+.|.+++.++++.++..+..++.+.++++|||. +++..++++..++.+|..++++..-.++..++++++.+.+
T Consensus        18 ~~~kPev~l~~v~i~~v~~~~~~l~~~l~V~NPN~-~~l~i~~l~y~l~~~g~~ia~G~~~~~~~ipa~~~~~v~v   92 (151)
T d1xo8a_          18 AIPKPEGSVTDVDLKDVNRDSVEYLAKVSVTNPYS-HSIPICEISFTFHSAGREIGKGKIPDPGSLKAKDMTALDI   92 (151)
T ss_dssp             CCCSCCCBCSEEEECCCTTTEECEEEEEEEECSSS-SCCCCEEEEEEEESSSSCEEEEEEEECCCCSSSSEEEEEE
T ss_pred             CCCCCeEEEEEEEeeecccceEEEEEEEEEECCCC-CceeeeeEEEEEEECCEEEEeEecCCCcEEcCCCcEEEEE
Confidence            45679999999999999888778999999999998 8999999999999999999999823467888999999987