Citrus Sinensis ID: 039468

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------1070------1080------1090------1100------1110------1120------1130------1140------1150------1160------1170------1180------1190------1200------1210------1220------1230------1240------1250------1260------1270------1280--

MGTAMEEVRWLNLMFLLLNVFIVSSAANGATGNEFVSAVGDPGMRRDGLRVAFEAWDFCNEVGKEAPGMGSPRAADCFDLSTSLESLLCWNGAGSSSLVHRVSEADNKLGVGMAFSGLNPEAVNNPDLYAAEKELYLGSLCQVEDTPNPWQFWMVMLKNGNYDTRSGLCPANGKKYHLLVLEDFLALELGLFRDGTLRGSFKGTYDLGADIEAGLDGVSFYEVAWEKKVGAGSWVFKHKLKTSKKYPWLMLYLRADATKGFSGGYHYETRGMLKTLPESPNFKVRLTLDVKQGGGPNSQFYLIDMGSCWKNDGSPCNGDVFTDVTRYSEMIINPRTPAWCSPTAQKNCPPYHITPHNKKIYRNDTANFPYGAYHYYCAPGNAQHLEQPVDTCDPYSNPQAQEIVQLLPHPIWAEYGYPTKKGQGWVGDARTWELDVGGLSSRLYFYQDPGTHPARRIWTSLDTGTEIFVSKKDEVAEKENLYEVGKIAGIAICEARTSPQGQSVLIPDVYSHLVRGSDIGTGCEAMGKGKLILICQSGGKFTTANDGSLVYSGGDAHALSVNKESSFDELKLEMAEMWKYDPNSMIVKYFLPNNNKTLITISGDKDIRRLIDFHEDSGTVDVYVMVGEKPTDDALTNPCSRSSRTTGAESVTPSDNLIPLPSVSGDMVLLNTLFPAASDAGDTRQLSNSAPAGSDLRQQKLIKSWKNCITGVHQRFNNVHDFRDALYKYSVAHGFTYCFKKNEGLRVTAKCKAEGCPWRIHASRVPTTQLFQIKTMNGMHTCKAGPDPTTRSKASRKLLASIVKEKLLEAPKCKPKEIAEEIRRDFGIELGYVKAWRALENARGESQVSYKDSYNQLPWLVDKILETNPGSVVTLSTREDLSFHHLFVALHASLYGFQNGCRPLIFLDSFPIKSKYQSSLLTATALDGNDEIFPVAFGVVDAVSDDNWHWFLLQLKSALSTCQSITFVTDRLGQLRASILSVFENSYYCYCLHHLTEELKRDLKGSYTEEVVSVIVAHLYDAAQAGTLDEFSKFIDSIKSVSSEAFDWILRSEPENWANALFKGSRHNQMTSHIAESFYCWVGELPELPIVQIISTICRKIMELMYSRRMDSNQWLTKLTPSLEDKLQNEMLKTHSLQVLLGLGSSFEVRGLGTFNVVNIDVWDCNCRGWQLNGFPCVHAAAVLQHVGRNLPDYCSKFYTTEAFRLTYSESVNPVPAVDQLLQASQSAQVQVPVQVRPPPLLPLTGPPKKRRIRWRGRPKRELHCSKCKGAGHNRKTCHVYA

ccHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEcccccccccccEEEEEccccHHHHcccccccccccccccccccccccccccccccccEEEEEEEcccccccccccccccccccccccccHHHHHHHHHccccccccccccccEEEEEEcccccccccccccccccccccccccccccccccccccccEEEccEEEEEEccccccccccccEEEEEEEEEEcccccEEEEEEEEccccccEEEEEEcccccccccccccccccccccccccccccEEEEEEEEEEccccccEEEEEEcccccccccccccccccccccccccEEEccccccccccccccccccccccccccEEEcccccccccccEEEEEccccccccccccccccccccccHHHHHHHccccccccccccccccccccccccEEEEEccccccEEEEEEcccccccccccccccccEEEEEccccHHHHHccccccccEEEEEEEEccccccccEEEcccccccccccccccccccccccccEEEEEEEccEEEEcccccEEEEcccccEEEEcccccHHHHHHHHHHHccccccccEEEEEEccccccEEEEccHHHHHHHHHHccccccEEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHccccccccccccccccccHHHHHHHHHHHHHHccEEEEEEEcccEEEEEEEccccccEEEEEEEccccccEEEEEccccccccccccccccccccHHHHHHHHHHHHcccccccHHHHHHHHHHHEEEEEccHHHHHHHHHHHHHHcccHHHHcccccHHHHcccccccccEEEEEEccccccEEEEEEEcccccccccccccEEEccccEEccccccccHHHcccccccccEEEEEEEEEcccccHHHHHHHHHHHHcccccccEEEEccccccHHcccccccccHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHcccHHHHHHHHcccccccccccccccccccccccccccEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHccEEEEEEEccccEEEEEEEEEEEEEEEEEEEEEccccccccccccHHHHHHHHccccccccccccccHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEcccccccccccccccccc

cccHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEccccccccccEEEEEHHHHHHcccccccccccccccccccccccccccccccccccEEEEEEEcccccccccccccccccHHHcccHHHHHHHHHHHHccccccccccccHHHHHHEEcccccccccccccccccccccccccccccccccccccccccccEEEEEEcccccccccccEEEEEEEEEEEcccccEEEEEEEcccccccHHHHEEHHccccccccccccccccccEEcccccccEEEEEEEEEEccccccEEEEEEccccccccccccccccccccccEEEEEEccccccccccccccccccccEcccccEEEEcccccccccEEEEEEccccHHHcccccccccccccccHHHHHHHcccccEcccccccccccccEccccEEEEcccHccccEEEEcccccccccEEccccccccEEEEcccHHHHHHHEEEEEHHHcEEEEEcccccccccEEccccccccEEEEcccccccEEccccEEEEEEEcccEEEEccccccEEccccccEEcccccccHHHHHHHHHHHccccccEEEEEEEEccccEEEEEccccHHHHHHHHHccccccEEEEEEEccccccccEEcccccccccccccccccccccccccHHccccccccccccccccccccccccccccccccccccccccccccccEEEcEEcccHHHHHHHHHHHHHHcccEEEEEEccccEEEEEEEcccccEEEEEEEcccccEEEEEEEccccEccccccccccccccHHHHHHHHHHHHcccccccHHHHHHHHHHHcccEEcHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHccccEEEEEcccccHHHHHEEEHHHHHHHHHHccccEEEEEccEEcccccEEEEEEEEEcccccEEEEEEEEEEccccHHHHHHHHHHHHHHcccccEEEEEcccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHccHHHcHHHHHHHHHccHHHHHHHHHccHHHHHHHcccccccccHcHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHccEEEEEcccEEEEEEEccEEEEEEEcccEccccccccccccHHHHHHHHHHccccHHHHHHHHccHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccEccccccccEEEEEcccccccccccccEEcc

MGTAMEEVRWLNLMFLLLNVFIVssaangatgnefvsavgdpgmrrdgLRVAFEAWDFCNevgkeapgmgspraadcfDLSTSLESllcwngagsssLVHRVSeadnklgvgmafsglnpeavnnpdlYAAEKELYLGslcqvedtpnpWQFWMVMLKngnydtrsglcpangkkyHLLVLEDFLALELGlfrdgtlrgsfkgtydlgadieagldgVSFYEVAWEKKVGAGSWVFKhklktskkypwLMLYLRADatkgfsggyhyetrgmlktlpespnfkvrltldvkqgggpnsqFYLIDMgscwkndgspcngdvftdVTRYSemiinprtpawcsptaqkncppyhitphnkkiyrndtanfpygayhyycapgnaqhleqpvdtcdpysnpqaQEIVQLlphpiwaeygyptkkgqgwvgdartweldvgglssrlyfyqdpgthparriwtsldtgteifvSKKDEVAEKENLYEVGKIAGIAIceartspqgqsvlipdvyshlvrgsdigtgceamgKGKLILICQsggkfttandgslvysggdahalsvnkessFDELKLEMAEMwkydpnsmivkyflpnnnktlitisgdkDIRRLIDFHEDSGTVDVYVMVgekptddaltnpcsrssrttgaesvtpsdnliplpsvsgdmVLLNTlfpaasdagdtrqlsnsapagsdLRQQKLIKSWKNCITGVHQRFNNVHDFRDALYKYSVAHGFTycfkkneglrvtakckaegcpwrihasrvpttqlFQIKtmngmhtckagpdpttrsKASRKLLASIVKEKlleapkckpkEIAEEIRRDFGIELGYVKAWRALEnargesqvsykdsynqlPWLVDKiletnpgsvvtlstredlsFHHLFVALHASLygfqngcrplifldsfpikskyqsslltataldgndeifpvAFGVVDAVSDDNWHWFLLQLKSALSTCQSITFVTDRLGQLRASILSVFENSYYCYCLHHLTEELKRDLKGSYTEEVVSVIVAHLYDaaqagtldEFSKFIDSIKSVSSEAFDWILRSEPENWANALfkgsrhnqmtSHIAESFYCwvgelpelpiVQIISTICRKIMELMYSRrmdsnqwltkltpSLEDKLQNEMLKTHSLQVLLGLgssfevrglgtfnvvnidvwdcncrgwqlngfpcVHAAAVLQHVGrnlpdycskfytteafrltysesvnpvpaVDQLLQASqsaqvqvpvqvrpppllpltgppkkrrirwrgrpkrelhcskckgaghnrktchvya

MGTAMEEVRWLNLMFLLLNVFIVSSAANGATGNEFVSAVGDPGMRRDGLRVAFEAWDFCNEVGKEAPGMGSPRAADCFDLSTSLESLLCWNGAGSSSLVHRVSEADNKLGVGMAFSGLNPEAVNNPDLYAAEKELYLGSLCQVEDTPNPWQFWMVMLKNGNYDTRSGLCPANGKKYHLLVLEDFLALELGLFRDGTLRGSFKGTYDLGADIEAGLDGVSFYEVAWEKKvgagswvfkhklktskkypwLMLYLRADATKGFSGGYHYETRGMLKTLPESPNFKVRLTLDVKQGGGPNSQFYLIDMGSCWKNDGSPCNGDVFTDVTRYSEMIINPRTPAWCSPTAQKNCPPYHITPHNKKIYRNDTANFPYGAYHYYCAPGNAQHLEQPVDTCDPYSNPQAQEIVQLLPHPIWAEYGYPTKKGQGWVGDARTWELDVGGLSSRLYFYQDPGTHPARRIWTSLDTGTEIfvskkdevaekenLYEVGKIAGIAICEARTSPQGQSVLIPDVYSHLVRGSDIGTGCEAMGKGKLILICQSGGKFTTANDGSLVYSGGDAHALSVNKESSFDELKLEMAEMWKYDPNSMIVKYFLPNNNKTLITISGDKDIRRLIDFHEDSGTVDVYVMVGEkptddaltnpcsrssrttgaesvtpsdnlIPLPSVSGDMVLLNTLFPAASDAGDTRQLSNsapagsdlRQQKLIKSWKNCITGVHQRFNNVHDFRDALYKYSVAHGFTYCFKKNEGLRVTAKCKAegcpwrihasrvPTTQLFQIKTMNGMHTCkagpdpttrskASRKLLASIvkeklleapkckpkeiAEEIRRDFGIELGYVKAWRALEnargesqvsykDSYNQLPWLVDKILETNPGSVVTLSTREDLSFHHLFVALHASLYGFQNGCRPLIFLDSFPIKSKYQSSLLTATALDGNDEIFPVAFGVVDAVSDDNWHWFLLQLKSALSTCQSITFVTDRLGQLRASILSVFENSYYCYCLHHLTEELKRDLKGSYTEEVVSVIVAHLYDAAQAGTLDEFSKFIDSIKSVSSEAFDWILRSEPENWANALFKGSRHNQMTSHIAESFYCWVGELPELPIVQIISTICRKIMELMYSRRMDSNQWLTKLTPSLEDKLQNEMLKTHSLQVLLGLGSSFEVRGLGTFNVVNIDVWDCNCRGWQLNGFPCVHAAAVLQHVGRNLPDYCSKFYTTEAFRLTYSESVNPVPAVDQLLQASQSAQvqvpvqvrpppllpltgppkkrrirwrgrpkrelhcskckgaghnrktchvya

MGTAMEEVRWLNLMFLLLNVFIVSSAANGATGNEFVSAVGDPGMRRDGLRVAFEAWDFCNEVGKEAPGMGSPRAADCFDLSTSLESLLCWNGAGSSSLVHRVSEADNKLGVGMAFSGLNPEAVNNPDLYAAEKELYLGSLCQVEDTPNPWQFWMVMLKNGNYDTRSGLCPANGKKYHllvledflalelglfRDGTLRGSFKGTYDLGADIEAGLDGVSFYEVAWEKKVGAGSWVFKHKLKTSKKYPWLMLYLRADATKGFSGGYHYETRGMLKTLPESPNFKVRLTLDVKQGGGPNSQFYLIDMGSCWKNDGSPCNGDVFTDVTRYSEMIINPRTPAWCSPTAQKNCPPYHITPHNKKIYRNDTANFPYGAYHYYCAPGNAQHLEQPVDTCDPYSNPQAQEIVQLLPHPIWAEYGYPTKKGQGWVGDARTWELDVGGLSSRLYFYQDPGTHPARRIWTSLDTGTEIFVSKKDEVAEKENLYEVGKIAGIAICEARTSPQGQSVLIPDVYSHLVRGSDIGTGCEAMGKGKLILICQSGGKFTTANDGSLVYSGGDAHALSVNKESSFDELKLEMAEMWKYDPNSMIVKYFLPNNNKTLITISGDKDIRRLIDFHEDSGTVDVYVMVGEKPTDDALTNPCSRSSRTTGAESVTPSDNLIPLPSVSGDMVLLNTLFPAASDAGDTRQLSNSAPAGSDLRQQKLIKSWKNCITGVHQRFNNVHDFRDALYKYSVAHGFTYCFKKNEGLRVTAKCKAEGCPWRIHASRVPTTQLFQIKTMNGMHTCKAGPDPTTRSKASRKLLASIVKEKLLEAPKCKPKEIAEEIRRDFGIELGYVKAWRALENARGESQVSYKDSYNQLPWLVDKILETNPGSVVTLSTREDLSFHHLFVALHASLYGFQNGCRPLIFLDSFPIKSKYQSSLLTATALDGNDEIFPVAFGVVDAVSDDNWHWFLLQLKSALSTCQSITFVTDRLGQLRASILSVFENSYYCYCLHHLTEELKRDLKGSYTEEVVSVIVAHLYDAAQAGTLDEFSKFIDSIKSVSSEAFDWILRSEPENWANALFKGSRHNQMTSHIAESFYCWVGELPELPIVQIISTICRKIMELMYSRRMDSNQWLTKLTPSLEDKLQNEMLKTHSLQVLLGLGSSFEVRGLGTFNVVNIDVWDCNCRGWQLNGFPCVHAAAVLQHVGRNLPDYCSKFYTTEAFRLTYSESVNPVPavdqllqasqsaqvqvpvqvrpppllpltgppkkrrirwrgrpkrELHCSKCKGAGHNRKTCHVYA

******EVRWLNLMFLLLNVFIVSSAANGATGNEFVSAVGDPGMRRDGLRVAFEAWDFCNEVGKE*******RAADCFDLSTSLESLLCWNGAGSSSLVHRVSEADNKLGVGMAFSGLNPEAVNNPDLYAAEKELYLGSLCQVEDTPNPWQFWMVMLKNGNYDTRSGLCPANGKKYHLLVLEDFLALELGLFRDGTLRGSFKGTYDLGADIEAGLDGVSFYEVAWEKKVGAGSWVFKHKLKTSKKYPWLMLYLRADATKGFSGGYHYETRGMLKTLPESPNFKVRLTLDVKQGGGPNSQFYLIDMGSCWKNDGSPCNGDVFTDVTRYSEMIINPRTPAWCSPTAQKNCPPYHITPHNKKIYRNDTANFPYGAYHYYCAPGNAQHLEQPVDTCDPYSNPQAQEIVQLLPHPIWAEYGYPTKKGQGWVGDARTWELDVGGLSSRLYFYQDPGTHPARRIWTSLDTGTEIFVSKKDEVAEKENLYEVGKIAGIAICEARTSPQGQSVLIPDVYSHLVRGSDIGTGCEAMGKGKLILICQSGGKFTTANDGSLVYSGGDAHALSVN***SFDELKLEMAEMWKYDPNSMIVKYFLPNNNKTLITISGDKDIRRLIDFHEDSGTVDVYVMVG*************************************GDMVLLNTLF*************************KLIKSWKNCITGVHQRFNNVHDFRDALYKYSVAHGFTYCFKKNEGLRVTAKCKAEGCPWRIHASRVPTTQLFQIKTMNGMHTC****************LASIVKEKLLEAPKCKPKEIAEEIRRDFGIELGYVKAWRALENARGESQVSYKDSYNQLPWLVDKILETNPGSVVTLSTREDLSFHHLFVALHASLYGFQNGCRPLIFLDSFPIKSKYQSSLLTATALDGNDEIFPVAFGVVDAVSDDNWHWFLLQLKSALSTCQSITFVTDRLGQLRASILSVFENSYYCYCLHHLTEELKRDLKGSYTEEVVSVIVAHLYDAAQAGTLDEFSKFIDSIKSVSSEAFDWILRSEPENWANALFKGSRHNQMTSHIAESFYCWVGELPELPIVQIISTICRKIMELMYSRRMDSNQWLTKLTPSLEDKLQNEMLKTHSLQVLLGLGSSFEVRGLGTFNVVNIDVWDCNCRGWQLNGFPCVHAAAVLQHVGRNLPDYCSKFYTTEAFRLTYSESVNPVPAVDQL*************************************************************

******EVRWLNLMFLLLNVFIVSSAANGATGNEFVSAVGDPGMRRDGLRVAFEAWDFCNEVGKEAPGMGSPRAADCFDLSTSLESLLCWNGAGSSSLVHRVSEADNKLGVGMAFSGLNPEAVNNPDLYAAEKELYLGSLCQVEDTPNPWQFWMVMLKNGNYDTRSGLCPANGKKYHLLVLEDFLALELGLFRDGTLRGSFKGTYDLGADIEAGLDGVSFYEVAWEKKVGAGSWVFKHKLKTSKKYPWLMLYLRADATKGFSGGYHYETRGMLKTLPESPNFKVRLTLDV****GPNSQFYLIDMGSCWKNDGSPCNGDVFTDVTRYSEMIINPRTPAWCSPTAQKNCPPYHITPHNKKIYRNDTANFPYGAYHYYCAPGNAQHLEQPVDTCDPYSNPQAQEIVQLLPHPIWAEYGYPTKKGQGWVGDARTWELDVGGLSSRLYFYQDPGTHPARRIWTSLDTGTEIFVSKKDEVAEKENLYEVGKIAGIAICEART*******LIPDVYSHLVRGSDIGTGCEAMGKGKLILICQSGGKFTTANDGSLVYSGGDAHALSVNKESSFDELKLEMAEMWKYDPNSMIVKYFLPNNNKTLITISGDKDIRRLIDFHEDSGTVDVYVMVGEKPTDDALTNPCSRSSRTTG************************************************LRQQKLIKSWKNCITGVHQRFNNVHDFRDALYKYSVAHGFTYCFKKNEGLRVTAKCKAEGCPWRIHASRVPTTQLFQIKTMNGMHTCKAGPDPTTRSKASRKLLASIVKEKLLEAPKCKPKEIAEEIRRDFGIELGYVKAWRALENARGESQVSYKDSYNQLPWLVDKILETNPGSVVTLSTREDLSFHHLFVALHASLYGFQNGCRPLIFLDSFPIKSKYQSSLLTATALDGNDEIFPVAFGVVDAVSDDNWHWFLLQLKSALSTCQSITFVTDRLGQLRASILSVFENSYYCYCLHHLTEELKRDLKGSYTEEVVSVIVAHLYDAAQAGTLDEFSKFIDSIKSVSSEAFDWILRSEPENWANALFKGSRHNQMTSHIAESFYCWVGELPELPIVQIISTICRKIMELMYSRRMDSNQWLTKLTPSLEDKLQNEMLKTHSLQVLLGLGSSFEVRGLGTFNVVNIDVWDCNCRGWQLNGFPCVHAAAVLQHVGRNLPDYCSKFYTTEAFRLTYSESVNPVPAVDQLLQASQSAQVQVPV********************************KCKGAGHNR**C****

MGTAMEEVRWLNLMFLLLNVFIVSSAANGATGNEFVSAVGDPGMRRDGLRVAFEAWDFCNEVGKEAPGMGSPRAADCFDLSTSLESLLCWNGAGSSSLVHRVSEADNKLGVGMAFSGLNPEAVNNPDLYAAEKELYLGSLCQVEDTPNPWQFWMVMLKNGNYDTRSGLCPANGKKYHLLVLEDFLALELGLFRDGTLRGSFKGTYDLGADIEAGLDGVSFYEVAWEKKVGAGSWVFKHKLKTSKKYPWLMLYLRADATKGFSGGYHYETRGMLKTLPESPNFKVRLTLDVKQGGGPNSQFYLIDMGSCWKNDGSPCNGDVFTDVTRYSEMIINPRTPAWCSPTAQKNCPPYHITPHNKKIYRNDTANFPYGAYHYYCAPGNAQHLEQPVDTCDPYSNPQAQEIVQLLPHPIWAEYGYPTKKGQGWVGDARTWELDVGGLSSRLYFYQDPGTHPARRIWTSLDTGTEIFVSKKDEVAEKENLYEVGKIAGIAICEARTSPQGQSVLIPDVYSHLVRGSDIGTGCEAMGKGKLILICQSGGKFTTANDGSLVYSGGDAHALSVNKESSFDELKLEMAEMWKYDPNSMIVKYFLPNNNKTLITISGDKDIRRLIDFHEDSGTVDVYVMVGEKPTDD*******************PSDNLIPLPSVSGDMVLLNTLFPAASDAGDTRQLSNSAPAGSDLRQQKLIKSWKNCITGVHQRFNNVHDFRDALYKYSVAHGFTYCFKKNEGLRVTAKCKAEGCPWRIHASRVPTTQLFQIKTMNGMHTCK***********SRKLLASIVKEKLLEAPKCKPKEIAEEIRRDFGIELGYVKAWRALENA********KDSYNQLPWLVDKILETNPGSVVTLSTREDLSFHHLFVALHASLYGFQNGCRPLIFLDSFPIKSKYQSSLLTATALDGNDEIFPVAFGVVDAVSDDNWHWFLLQLKSALSTCQSITFVTDRLGQLRASILSVFENSYYCYCLHHLTEELKRDLKGSYTEEVVSVIVAHLYDAAQAGTLDEFSKFIDSIKSVSSEAFDWILRSEPENWANALFKGSRHNQMTSHIAESFYCWVGELPELPIVQIISTICRKIMELMYSRRMDSNQWLTKLTPSLEDKLQNEMLKTHSLQVLLGLGSSFEVRGLGTFNVVNIDVWDCNCRGWQLNGFPCVHAAAVLQHVGRNLPDYCSKFYTTEAFRLTYSESVNPVPAVDQLLQASQSAQVQVPVQVRPPPLLPLTGPPKKRRIRWRGRPKRELHCSKCKGAGHNRKTCHVYA

*GTAMEEVRWLNLMFLLLNVFIVSSAANGATGNEFVSAVGDPGMRRDGLRVAFEAWDFCNEVGKEAPGMGSPRAADCFDLSTSLESLLCWNGAGSSSLVHRVSEADNKLGVGMAFSGLNPEAVNNPDLYAAEKELYLGSLCQVEDTPNPWQFWMVMLKNGNYDTRSGLCPANGKKYHLLVLEDFLALELGLFRDGTLRGSFKGTYDLGADIEAGLDGVSFYEVAWEKKVGAGSWVFKHKLKTSKKYPWLMLYLRADATKGFSGGYHYETRGMLKTLPESPNFKVRLTLDVKQGGGPNSQFYLIDMGSCWKNDGSPCNGDVFTDVTRYSEMIINPRTPAWCSPTAQKNCPPYHITPHNKKIYRNDTANFPYGAYHYYCAPGNAQHLEQPVDTCDPYSNPQAQEIVQLLPHPIWAEYGYPTKKGQGWVGDARTWELDVGGLSSRLYFYQDPGTHPARRIWTSLDTGTEIFVSKKDEVAEKENLYEVGKIAGIAICEARTSPQGQSVLIPDVYSHLVRGSDIGTGCEAMGKGKLILICQSGGKFTTANDGSLVYSGGDAHALSVNKESSFDELKLEMAEMWKYDPNSMIVKYFLPNNNKTLITISGDKDIRRLIDFHEDSGTVDVYVMVGEK**********************************************************************KLIKSWKNCITGVHQRFNNVHDFRDALYKYSVAHGFTYCFKKNEGLRVTAKCKAEGCPWRIHASRVPTTQLFQIKTMNGMHTCKAGPDPTTRSKASRKLLASIVKEKLLEAPKCKPKEIAEEIRRDFGIELGYVKAWRALENARGESQVSYKDSYNQLPWLVDKILETNPGSVVTLSTREDLSFHHLFVALHASLYGFQNGCRPLIFLDSFPIKSKYQSSLLTATALDGNDEIFPVAFGVVDAVSDDNWHWFLLQLKSALSTCQSITFVTDRLGQLRASILSVFENSYYCYCLHHLTEELKRDLKGSYTEEVVSVIVAHLYDAAQAGTLDEFSKFIDSIKSVSSEAFDWILRSEPENWANALFKGSRHNQMTSHIAESFYCWVGELPELPIVQIISTICRKIMELMYSRRMDSNQWLTKLTPSLEDKLQNEMLKTHSLQVLLGLGSSFEVRGLGTFNVVNIDVWDCNCRGWQLNGFPCVHAAAVLQHVGRNLPDYCSKFYTTEAFRLTYSESVNPVPAVDQLLQASQSAQVQVPVQVRPPPL********KR******RPKRELHCSKCKGAGHNRKTCHVYA

oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

iiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

iiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

SSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

SSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx

no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		1282
449456080		770	PREDICTED: uncharacterized protein LOC10	0.582	0.970	0.529	0.0
449510833		770	PREDICTED: LOW QUALITY PROTEIN: uncharac	0.582	0.970	0.529	0.0
225450448		768	PREDICTED: uncharacterized protein LOC10	0.580	0.968	0.517	0.0
356548025		748	PREDICTED: uncharacterized protein LOC10	0.577	0.989	0.503	0.0
225432189		746	PREDICTED: uncharacterized protein LOC10	0.579	0.995	0.494	0.0
356565507		748	PREDICTED: uncharacterized protein LOC10	0.581	0.997	0.5	0.0
224128171		573	predicted protein [Populus trichocarpa]	0.446	0.998	0.624	0.0
147780251		1076	hypothetical protein VITISV_037761 [Viti	0.542	0.646	0.526	0.0
224068699		573	predicted protein [Populus trichocarpa]	0.446	0.998	0.617	0.0
356575297		758	PREDICTED: uncharacterized protein LOC10	0.573	0.969	0.490	0.0

>gi\|449456080\|ref\|XP_004145778.1\| PREDICTED: uncharacterized protein LOC101203656 [Cucumis sativus]	Back alignment and taxonomy information

 Score =  798 bits (2061), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 407/769 (52%), Positives = 533/769 (69%), Gaps = 22/769 (2%)

Query: 526  MGKGKLILICQSGGKFTTANDGSLVYSGGDAHALSVNKESSFDELKLEMAEMWKYDPNSM 585
            M + K+I ICQSGG+F T  DG L Y GGDAHA+ V+ +  F+E K+E+AEM+ +D +++
Sbjct: 1    MAEKKIIAICQSGGEFETGRDGMLSYHGGDAHAIDVDDKMKFNEFKMEIAEMFNFDVDNV 60

Query: 586  IVKYFLPNNNKTLITISGDKDIRRLIDFHEDSGTVDVYVMVGEKPTDDALTNPCSRSSRT 645
             +KYFLP N KTLIT+S DKD++R++ FH DS TVD++V++ E    +    P SRSSRT
Sbjct: 61   SIKYFLPGNRKTLITLSNDKDLKRMLKFHGDSTTVDIFVIMEEVMAPNISNLPASRSSRT 120

Query: 646  TGAESVTPSDNLIPLPSVSG---DMVLLNTLFPAASDA-GDTRQLSNSAPAGSDL----- 696
            T +E+V P D   PL  V G   D +  +     A D   DT  L N      D+     
Sbjct: 121  TLSETVVPVDG-TPLTVVHGIEDDNIESDIPLDGALDVVDDTNPLVNHIDIAGDITPILP 179

Query: 697  -------RQQKLIKSWKNCITGVHQRFNNVHDFRDALYKYSVAHGFTYCFKKNEGLRVTA 749
                   +  K ++ W+N ITGV QRF++VH+FR++L KY++AH F + +KKN+  RVT 
Sbjct: 180  LLGSSDEKNGKGVQQWQNTITGVGQRFSSVHEFRESLRKYAIAHQFAFRYKKNDSHRVTV 239

Query: 750  KCKAEGCPWRIHASRVPTTQLFQIKTMNGMHTCKAGPDPTTRSKASRKLLASIVKEKLLE 809
            KCKAEGCPWRIHASR+ TTQL  IK MN  HTC+ G   TT  +A+R  +ASIVKEKL  
Sbjct: 240  KCKAEGCPWRIHASRLSTTQLICIKKMNPNHTCE-GAVTTTGHQATRSWVASIVKEKLKV 298

Query: 810  APKCKPKEIAEEIRRDFGIELGYVKAWRALENARGESQVSYKDSYNQLPWLVDKILETNP 869
             P  KPK+I  +I++++GI+L Y +AWR  E A+ + Q SYK++YNQLP+L  KI+ETNP
Sbjct: 299  FPNYKPKDIVHDIKQEYGIQLNYFQAWRGKEIAKEQLQGSYKEAYNQLPFLCGKIMETNP 358

Query: 870  GSVVTLSTREDLSFHHLFVALHASLYGFQNGCRPLIFLDSFPIKSKYQSSLLTATALDGN 929
            GS+ T  T+ED +FH LFV+ HASL GFQ GCRPLIFLDS P+KSKYQ +LL ATA DG+
Sbjct: 359  GSLATCDTKEDSTFHRLFVSFHASLSGFQQGCRPLIFLDSIPLKSKYQGTLLAATAADGD 418

Query: 930  DEIFPVAFGVVDAVSDDNWHWFLLQLKSALSTCQSITFVTDRLGQLRASILSVFENSYYC 989
            D  FPVAF VVD  SDDNW WFLLQLKSALST  SITFV DR   L  SI ++F+ S++ 
Sbjct: 419  DGFFPVAFSVVDTESDDNWSWFLLQLKSALSTSCSITFVADRQKGLTVSIANIFKGSFHG 478

Query: 990  YCLHHLTEELKRDLKGSYTEEVVSVIVAHLYDAAQAGTLDEFSKFIDSIKSVSSEAFDWI 1049
            YCL +LTE+L RDLKG ++ EV  +IV   Y AA A   + F + ++SIKS+S +A++WI
Sbjct: 479  YCLRYLTEQLIRDLKGQFSHEVKRLIVEDFYAAAYAPKPENFQRCVESIKSISLDAYNWI 538

Query: 1050 LRSEPENWANALFKGSRHNQMTSHIAESFYCWVGELPELPIVQIISTICRKIMELMYSRR 1109
            L+SEP+NWANA F+G+R+N MTS+  E FY WV E  ELPI Q++  I  KIMEL+Y+RR
Sbjct: 539  LQSEPQNWANAFFEGARYNHMTSNFGEMFYSWVSEAHELPITQMVDVIRVKIMELIYARR 598

Query: 1110 MDSNQWLTKLTPSLEDKLQNEMLKTHSLQVLLGLGSSFEVRGLGTFNVVNIDVWDCNCRG 1169
             DS+QWLT+LTPS+E+KL+ E  K H+L VL+  GS+FEVRG  +  VV++D WDC C+G
Sbjct: 599  ADSDQWLTRLTPSMEEKLEKEGHKAHNLHVLISAGSTFEVRG-DSIEVVDVDHWDCTCKG 657

Query: 1170 WQLNGFPCVHAAAVLQHVGRNLPDYCSKFYTTEAFRLTYSESVNPVPAVDQLLQASQSAQ 1229
            WQL G PC HA AVL  +GR+  D+CS+++TTE++RLTYS+SV+PVP VD  +  S    
Sbjct: 658  WQLTGLPCSHAIAVLSCLGRSPFDFCSRYFTTESYRLTYSDSVHPVPQVDLPIHKS---S 714

Query: 1230 VQVPVQVRPPPLLPLTGPPKKRRIRWRGRPKRELHCSKCKGAGHNRKTC 1278
            +Q  V V PPP     G P  +R       KR+L CS+CKG GHN+ TC
Sbjct: 715  LQASVTVTPPPTRRPPGRPTSKRYGSPEVMKRQLQCSRCKGLGHNKSTC 763

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|449510833\|ref\|XP_004163775.1\| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101203656 [Cucumis sativus]	Back alignment and taxonomy information

>gi\|225450448\|ref\|XP_002276424.1\| PREDICTED: uncharacterized protein LOC100251030 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|356548025\|ref\|XP_003542404.1\| PREDICTED: uncharacterized protein LOC100776940 [Glycine max]	Back alignment and taxonomy information

>gi\|225432189\|ref\|XP_002268620.1\| PREDICTED: uncharacterized protein LOC100247698 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|356565507\|ref\|XP_003550981.1\| PREDICTED: uncharacterized protein LOC100809446 [Glycine max]	Back alignment and taxonomy information

>gi\|224128171\|ref\|XP_002320261.1\| predicted protein [Populus trichocarpa] gi\|222861034\|gb\|EEE98576.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|147780251\|emb\|CAN65744.1\| hypothetical protein VITISV_037761 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|224068699\|ref\|XP_002302803.1\| predicted protein [Populus trichocarpa] gi\|222844529\|gb\|EEE82076.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|356575297\|ref\|XP_003555778.1\| PREDICTED: uncharacterized protein LOC100797259 [Glycine max]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		1282
TAIR\|locus:2041419		493	AT2G47010 "AT2G47010" [Arabido	0.296	0.770	0.689	3.1e-154
TAIR\|locus:2020397		502	AT1G17030 "AT1G17030" [Arabido	0.358	0.914	0.488	1.1e-121
TAIR\|locus:2197122		785	AT1G49920 "AT1G49920" [Arabido	0.403	0.658	0.229	1.1e-30
TAIR\|locus:2014230		719	AT1G64260 "AT1G64260" [Arabido	0.503	0.898	0.222	7.6e-30
TAIR\|locus:1006230722		750	AT1G64255 [Arabidopsis thalian	0.352	0.602	0.246	1.5e-20
TAIR\|locus:504955241		223	AT4G09965 "AT4G09965" [Arabido	0.044	0.255	0.610	1.2e-17
TAIR\|locus:2033595		174	AT1G70640 "AT1G70640" [Arabido	0.099	0.735	0.308	5.4e-08
TAIR\|locus:2161907		192	AT5G63130 "AT5G63130" [Arabido	0.100	0.671	0.279	2.9e-05
TAIR\|locus:2101175		180	AT3G48240 "AT3G48240" [Arabido	0.066	0.472	0.333	5.3e-05
TAIR\|locus:2014639		732	FRS4 "FAR1-related sequence 4"	0.255	0.446	0.202	0.0001

TAIR\|locus:2041419 AT2G47010 "AT2G47010" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 1504 (534.5 bits), Expect = 3.1e-154, P = 3.1e-154
 Identities = 275/399 (68%), Positives = 315/399 (78%)

Query:    96 SSLVHRVSEADNKLGVGMAFSGLNPE-AVNNPDLYAAEKELYLGSLCQVEDTPNPWQFWM 154
             SSLVH+VS++DN+LG+G    G+  E A++NPDLYA EKELYLGSLCQV D PNPW FWM
Sbjct:    86 SSLVHKVSDSDNELGIGKPKPGIISESALHNPDLYAVEKELYLGSLCQVSDKPNPWSFWM 145

Query:   155 VMLKNGNYDTRSGLCPANGKK---YHXXXXX-----------XXXXXXXXXXRDG-TLRG 199
             VMLKNGNYDT+S LCP NGKK   ++                          RDG T++G
Sbjct:   146 VMLKNGNYDTKSALCPKNGKKIPPFNQPGLFPCFGSGCMNQPTLNHGKTELQRDGQTMKG 205

Query:   200 SFKGTYDLGADIEAGLDGVSFYEVAWEKKVGAGSWVFKHKLKTSKKYPWLMLYLRADATK 259
              F GTY+ GAD   GLDG+S+YEV WEK+VG G WVFKHKLKTS KYPWLMLYLRADATK
Sbjct:   206 WFNGTYEQGADFGNGLDGISYYEVVWEKRVGVGGWVFKHKLKTSAKYPWLMLYLRADATK 265

Query:   260 GFSGGYHYETRGMLKTLPESPNFKVRLTLDVKQGGGPNSQFYLIDMGSCWKNDGSPCNGD 319
             GFSGGYHY+TRGMLKTLPESPNFKVRLTL+VKQGGG  SQFYL+D+GSCWKN+G PC+GD
Sbjct:   266 GFSGGYHYDTRGMLKTLPESPNFKVRLTLNVKQGGGAKSQFYLLDIGSCWKNNGKPCDGD 325

Query:   320 VFTDVTRYSEMIINPRTPAWCSPTAQKNCPPYHITPHNKKIYRNDTANFPYGAYHYYCAP 379
             V TDVTRYSEMIINP TP WC+P +  NCPPYH   +  +++R D  +FPY AYH YCAP
Sbjct:   326 VTTDVTRYSEMIINPETPLWCNPKSLHNCPPYHTFRNGTRVHRTDHRSFPYEAYHVYCAP 385

Query:   380 GNAQHLEQPVDTCDPYSNPQAQEIVQLLPHPIWAEYGYPTKKGQGWVGDARTWELDVGGL 439
             GNA+HLE PV TCD YSNPQAQEI+QLLPHP+W EYGYPT+ G GWVGD RTW+LDVGGL
Sbjct:   386 GNAEHLELPVGTCDAYSNPQAQEILQLLPHPVWGEYGYPTRLGDGWVGDPRTWDLDVGGL 445

Query:   440 SSRLYFYQDPGTHPARRIWTSLDTGTEIFVSKKDE-VAE 477
             SSRL+FYQDPGT PARRIWTS+D GTEI+  K+DE +AE
Sbjct:   446 SSRLFFYQDPGTIPARRIWTSVDVGTEIY--KEDEAIAE 482

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR\|locus:2020397 AT1G17030 "AT1G17030" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2197122 AT1G49920 "AT1G49920" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2014230 AT1G64260 "AT1G64260" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:1006230722 AT1G64255 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:504955241 AT4G09965 "AT4G09965" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2033595 AT1G70640 "AT1G70640" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2161907 AT5G63130 "AT5G63130" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2101175 AT3G48240 "AT3G48240" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2014639 FRS4 "FAR1-related sequence 4" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		1282
cd06410		97	cd06410, PB1_UP2, Uncharacterized protein 2	1e-23
pfam03108		67	pfam03108, DBD_Tnp_Mut, MuDR family transposase	1e-19
pfam10551		88	pfam10551, MULE, MULE transposase domain	9e-18
smart00666		81	smart00666, PB1, PB1 domain	1e-08
pfam00564		84	pfam00564, PB1, PB1 domain	2e-08
cd05992		81	cd05992, PB1, The PB1 domain is a modular domain m	6e-07
smart00575		28	smart00575, ZnF_PMZ, plant mutator transposase zin	8e-07
pfam04434		38	pfam04434, SWIM, SWIM zinc finger	2e-06

>gnl\|CDD\|99731 cd06410, PB1_UP2, Uncharacterized protein 2	Back alignment and domain information

 Score = 96.1 bits (240), Expect = 1e-23
 Identities = 27/98 (27%), Positives = 55/98 (56%), Gaps = 7/98 (7%)

Query: 534 ICQSGGKFT-TANDGSLVYSGGDAHALSVNKESSFDELKLEMAEMWKYDPNSMIVKYFLP 592
           +C  GG+      DG L Y GG+   +SV++  SF EL  +++E++      + +KY LP
Sbjct: 1   LCSYGGRILPRPPDGQLRYVGGETRIVSVDRSISFKELVSKLSELFG-AGVVVTLKYQLP 59

Query: 593 NNNKT-LITISGDKDIRRLIDFHE----DSGTVDVYVM 625
           + +   LI++S D+D++ +++ ++     S  + V++ 
Sbjct: 60  DEDLDALISVSNDEDLKNMMEEYDRLSGGSARLRVFLF 97

The PB1 domain is a modular domain mediating specific protein-protein interaction which play a role in many critical cell processes such as osteoclastogenesis, angiogenesis, early cardiovascular development, and cell polarity. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-interactions. Length = 97

>gnl\|CDD\|190526 pfam03108, DBD_Tnp_Mut, MuDR family transposase	Back alignment and domain information

>gnl\|CDD\|220806 pfam10551, MULE, MULE transposase domain	Back alignment and domain information

>gnl\|CDD\|214770 smart00666, PB1, PB1 domain	Back alignment and domain information

>gnl\|CDD\|215996 pfam00564, PB1, PB1 domain	Back alignment and domain information

>gnl\|CDD\|99716 cd05992, PB1, The PB1 domain is a modular domain mediating specific protein-protein interactions which play a role in many critical cell processes, such as osteoclastogenesis, angiogenesis, early cardiovascular development, and cell polarity	Back alignment and domain information

>gnl\|CDD\|128845 smart00575, ZnF_PMZ, plant mutator transposase zinc finger	Back alignment and domain information

>gnl\|CDD\|218087 pfam04434, SWIM, SWIM zinc finger	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		1282
PLN03097		846	FHY3 Protein FAR-RED ELONGATED HYPOCOTYL 3; Provis	100.0
cd06410		97	PB1_UP2 Uncharacterized protein 2. The PB1 domain	99.81
PF10551		93	MULE: MULE transposase domain; InterPro: IPR018289	99.8
PF00872		381	Transposase_mut: Transposase, Mutator family; Inte	99.77
PF03108		67	DBD_Tnp_Mut: MuDR family transposase; InterPro: IP	99.55
COG3328		379	Transposase and inactivated derivatives [DNA repli	99.39
smart00575		28	ZnF_PMZ plant mutator transposase zinc finger.	98.47
PF08731		111	AFT: Transcription factor AFT; InterPro: IPR014842	98.37
smart00666		81	PB1 PB1 domain. Phox and Bem1p domain, present in	98.16
PF03101		91	FAR1: FAR1 DNA-binding domain; InterPro: IPR004330	98.11
PF04434		40	SWIM: SWIM zinc finger; InterPro: IPR007527 Zinc f	97.68
cd05992		81	PB1 The PB1 domain is a modular domain mediating s	97.5
PF00564		84	PB1: PB1 domain; InterPro: IPR000270 The Phox and	97.27
cd06407		82	PB1_NLP A PB1 domain is present in NIN like protei	97.03
cd06408		86	PB1_NoxR The PB1 domain is present in the Epichloe	96.38
cd06406		80	PB1_P67 A PB1 domain is present in p67 proteins wh	95.82
cd06396		81	PB1_NBR1 The PB1 domain is an essential part of NB	95.79
cd06398		91	PB1_Joka2 The PB1 domain is present in the Nicotia	94.68
cd06404		83	PB1_aPKC PB1 domain is an essential modular domain	94.14
cd06402		87	PB1_p62 The PB1 domain is an essential part of p62	94.0
PF04684		496	BAF1_ABF1: BAF1 / ABF1 chromatin reorganising fact	93.5
cd06403		80	PB1_Par6 The PB1 domain is an essential part of Pa	93.24
PF06782		470	UPF0236: Uncharacterised protein family (UPF0236);	92.81
PF15288		40	zf-CCHC_6: Zinc knuckle	92.13
cd06397		82	PB1_UP1 Uncharacterized protein 1. The PB1 domain	91.23
cd06409		86	PB1_MUG70 The MUG70 protein is a product of the me	91.18
PF00098		18	zf-CCHC: Zinc knuckle; InterPro: IPR001878 Zinc fi	90.75
PF01610		249	DDE_Tnp_ISL3: Transposase; InterPro: IPR002560 Aut	90.25
PF03050		271	DDE_Tnp_IS66: Transposase IS66 family ; InterPro:	90.11
cd06401		81	PB1_TFG The PB1 domain found in TFG protein, an on	89.64
cd06405		79	PB1_Mekk2_3 The PB1 domain is present in the two m	88.6
cd06411		78	PB1_p51 The PB1 domain is present in the p51 prote	88.17
PF13610		140	DDE_Tnp_IS240: DDE domain	88.07
PRK14702		262	insertion element IS2 transposase InsD; Provisiona	86.84
PF03106		60	WRKY: WRKY DNA -binding domain; InterPro: IPR00365	85.72
PHA02517		277	putative transposase OrfB; Reviewed	84.72

>PLN03097 FHY3 Protein FAR-RED ELONGATED HYPOCOTYL 3; Provisional	Back alignment and domain information

Probab=100.00  E-value=4.1e-65  Score=634.50  Aligned_cols=476  Identities=16%  Similarity=0.215  Sum_probs=378.2

Q ss_pred             CCCCCCcEECCHHHHHHHHHHHHHHcCceEEEeecCCe-------EEEEeee----------------------------
Q 039468          708 CITGVHQRFNNVHDFRDALYKYSVAHGFTYCFKKNEGL-------RVTAKCK----------------------------  752 (1282)
Q Consensus       708 ~il~VGm~F~S~eEfk~AI~~YAi~~gF~~rvkKSdk~-------Rv~~~C~----------------------------  752 (1282)
                      ..+.+||+|.|.+|++++|+.||...||.+|+.++.++       ..+++|+                            
T Consensus        72 ~~P~vGMeF~S~eeA~~FYn~YA~~~GFsVRi~~srrsk~~~~ii~r~fvCsreG~~~~~~~~~~~~~~~~~k~~~~~~~  151 (846)
T PLN03097         72 LEPLSGMEFESHGEAYSFYQEYARSMGFNTAIQNSRRSKTSREFIDAKFACSRYGTKREYDKSFNRPRARQTKQDPENGT  151 (846)
T ss_pred             ccCcCCCeECCHHHHHHHHHHHHhhcCceEEeeceeccCCCCcEEEEEEEEcCCCCCcccccccccccccccccCccccc
Confidence            45789999999999999999999999999988544321       2245664                            


Q ss_pred             ------cCCCceEEEEEEeCCCCeEEEEeecCCCcCCCCCCCCccchhhhhhHHHHHHHHhhcCCCCChhhHHHHHHHhc
Q 039468          753 ------AEGCPWRIHASRVPTTQLFQIKTMNGMHTCKAGPDPTTRSKASRKLLASIVKEKLLEAPKCKPKEIAEEIRRDF  826 (1282)
Q Consensus       753 ------~~GCpWrI~As~~~~s~~w~Ik~~~~eHnC~~~~~~~~hr~aSsr~IA~~ik~~ir~~p~~~p~~I~~~l~~~~  826 (1282)
                            ++||+++|.+.+. ..+.|+|+.+..+|||++.+..... ..+++......+ .+....++.      .++.+.
T Consensus       152 ~rR~~tRtGC~A~m~Vk~~-~~gkW~V~~fv~eHNH~L~p~~~~~-~~~r~~~~~~~~-~~~~~~~v~------~~~~d~  222 (846)
T PLN03097        152 GRRSCAKTDCKASMHVKRR-PDGKWVIHSFVKEHNHELLPAQAVS-EQTRKMYAAMAR-QFAEYKNVV------GLKNDS  222 (846)
T ss_pred             ccccccCCCCceEEEEEEc-CCCeEEEEEEecCCCCCCCCccccc-hhhhhhHHHHHh-hhhcccccc------ccchhh
Confidence                  3479999999875 4468999999999999998654211 111111111100 010000000      000000


Q ss_pred             CcccChHhHHHhhHhhhccCCCChhhhhhcHHHHHHHHHhhCCCcEEEEccccCccceeeeecchhhHHHHHhcCCCeee
Q 039468          827 GIELGYVKAWRALENARGESQVSYKDSYNQLPWLVDKILETNPGSVVTLSTREDLSFHHLFVALHASLYGFQNGCRPLIF  906 (1282)
Q Consensus       827 G~~iSy~q~~Rak~ka~e~i~G~~~esy~~L~~yl~~l~e~NPGs~~~v~~ded~~F~rlF~a~~~si~gf~~gcrpVI~  906 (1282)
                           .....+.|.+.+  -.|    ..+.|..|++++++.||+|+|++++|++++++++|||++.++..|.+ |+|||.
T Consensus       223 -----~~~~~~~r~~~~--~~g----D~~~ll~yf~~~q~~nP~Ffy~~qlDe~~~l~niFWaD~~sr~~Y~~-FGDvV~  290 (846)
T PLN03097        223 -----KSSFDKGRNLGL--EAG----DTKILLDFFTQMQNMNSNFFYAVDLGEDQRLKNLFWVDAKSRHDYGN-FSDVVS  290 (846)
T ss_pred             -----cchhhHHHhhhc--ccc----hHHHHHHHHHHHHhhCCCceEEEEEccCCCeeeEEeccHHHHHHHHh-cCCEEE
Confidence                 001111122211  123    34679999999999999999999999999999999999999999998 999999


Q ss_pred             ecccccccccCcceeeeeeecCCCCeEEEEEEEeccCCchhHHHHHHHHHHhhcCCceEEEEecCcchHHHHHHHHhhcc
Q 039468          907 LDSFPIKSKYQSSLLTATALDGNDEIFPVAFGVVDAVSDDNWHWFLLQLKSALSTCQSITFVTDRLGQLRASILSVFENS  986 (1282)
Q Consensus       907 iD~TyltnkY~g~Ll~avGvD~n~~~~pvAfAvV~~Et~esw~WfLe~Lk~~m~~~~p~vIISD~~~gL~~AI~eVFP~a  986 (1282)
                      +|+||++|+|++||+.++|+|+|+|++++|+||+.+|+.++|.|+|++|+++|++..|.+||||++.+|.+||++|||++
T Consensus       291 fDTTY~tN~y~~Pfa~FvGvNhH~qtvlfGcaLl~dEt~eSf~WLf~tfl~aM~gk~P~tIiTDqd~am~~AI~~VfP~t  370 (846)
T PLN03097        291 FDTTYVRNKYKMPLALFVGVNQHYQFMLLGCALISDESAATYSWLMQTWLRAMGGQAPKVIITDQDKAMKSVISEVFPNA  370 (846)
T ss_pred             EeceeeccccCcEEEEEEEecCCCCeEEEEEEEcccCchhhHHHHHHHHHHHhCCCCCceEEecCCHHHHHHHHHHCCCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ceeccchhhhHHHHhhccCCccHHHHHHHHHHHHHHhhcc-cHHHHHHHHHHHh-hcchhhhHHHhhc--Ccchhhhhhc
Q 039468          987 YYCYCLHHLTEELKRDLKGSYTEEVVSVIVAHLYDAAQAG-TLDEFSKFIDSIK-SVSSEAFDWILRS--EPENWANALF 1062 (1282)
Q Consensus       987 ~H~~C~~HI~~N~~k~lk~~~~~e~k~~~~~~f~~~a~A~-t~eeFe~~~e~L~-~~~pea~~wL~~~--~~ekWa~Ayf 1062 (1282)
                      .|++|+|||++|+.+++...+..  .+.|...|..|++.+ +++||+..|.+|. +++.+..+||..+  .|++||++|+
T Consensus       371 ~Hr~C~wHI~~~~~e~L~~~~~~--~~~f~~~f~~cv~~s~t~eEFE~~W~~mi~ky~L~~n~WL~~LY~~RekWapaY~  448 (846)
T PLN03097        371 HHCFFLWHILGKVSENLGQVIKQ--HENFMAKFEKCIYRSWTEEEFGKRWWKILDRFELKEDEWMQSLYEDRKQWVPTYM  448 (846)
T ss_pred             eehhhHHHHHHHHHHHhhHHhhh--hhHHHHHHHHHHhCCCCHHHHHHHHHHHHHhhcccccHHHHHHHHhHhhhhHHHh
Confidence            99999999999999999765432  357888999988765 9999999998876 6678899999998  9999999999


Q ss_pred             cCCCc-CcCCcchhhhHHHHHcc--CCCCChhhHHHHHHHHHHHHHHHhh-----------------hhhhhhhccCChh
Q 039468         1063 KGSRH-NQMTSHIAESFYCWVGE--LPELPIVQIISTICRKIMELMYSRR-----------------MDSNQWLTKLTPS 1122 (1282)
Q Consensus      1063 ~g~r~-g~mTTN~sESfNa~LK~--~R~lpI~~lle~Ir~klm~~~~~rr-----------------~~s~k~~~~lTP~ 1122 (1282)
                      ++.++ ++.||+++||+|+.+++  .+..+|..|++.+-.-+..+..+..                 ...++++..|||.
T Consensus       449 k~~F~agm~sTqRSES~Ns~fk~yv~~~tsL~~Fv~qye~~l~~~~ekE~~aD~~s~~~~P~l~t~~piEkQAs~iYT~~  528 (846)
T PLN03097        449 RDAFLAGMSTVQRSESINAFFDKYVHKKTTVQEFVKQYETILQDRYEEEAKADSDTWNKQPALKSPSPLEKSVSGVYTHA  528 (846)
T ss_pred             cccccCCcccccccccHHHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCcccccccHHHHHHHHHhHHH
Confidence            98887 56677899999999998  6888899888765443332221111                 1134568999999


Q ss_pred             HHHHHHHHHHhccceEEEE----ecCceEEEEee--CeeEEe--cc--ceeeeeccCccccCccchhHHHHHhhhCC--C
Q 039468         1123 LEDKLQNEMLKTHSLQVLL----GLGSSFEVRGL--GTFNVV--NI--DVWDCNCRGWQLNGFPCVHAAAVLQHVGR--N 1190 (1282)
Q Consensus      1123 i~kkLqeei~ka~~~~V~~----~~~~~FeV~~~--~~~~vV--dl--~~~tCSCr~wq~~GIPC~HaLAVl~~~g~--~ 1190 (1282)
                      +|++||+|+..+..|.+..    +...+|.|.+.  ...|.|  |.  ...+|+|++|+..||||+|||.||...++  .
T Consensus       529 iF~kFQ~El~~~~~~~~~~~~~dg~~~~y~V~~~~~~~~~~V~~d~~~~~v~CsC~kFE~~GILCrHaLkVL~~~~v~~I  608 (846)
T PLN03097        529 VFKKFQVEVLGAVACHPKMESQDETSITFRVQDFEKNQDFTVTWNQTKLEVSCICRLFEYKGYLCRHALVVLQMCQLSAI  608 (846)
T ss_pred             HHHHHHHHHHHhhheEEeeeccCCceEEEEEEEecCCCcEEEEEecCCCeEEeeccCeecCccchhhHHHHHhhcCcccC
Confidence            9999999999999888763    23357888764  345666  32  57899999999999999999999999997  6


Q ss_pred             ccccccccccHHHHhc
Q 039468         1191 LPDYCSKFYTTEAFRL 1206 (1282)
Q Consensus      1191 p~dyI~~~yt~eayr~ 1206 (1282)
                      |+.||.++||+++-+.
T Consensus       609 P~~YILkRWTKdAK~~  624 (846)
T PLN03097        609 PSQYILKRWTKDAKSR  624 (846)
T ss_pred             chhhhhhhchhhhhhc
Confidence            8999999999987643

>cd06410 PB1_UP2 Uncharacterized protein 2	Back alignment and domain information

>PF10551 MULE: MULE transposase domain; InterPro: IPR018289 This entry represents a domain found in Mutator-like elements (MULE)-encoded tranposases, some of which also contain a zinc-finger motif [, ]	Back alignment and domain information

>PF00872 Transposase_mut: Transposase, Mutator family; InterPro: IPR001207 Autonomous mobile genetic elements such as transposon or insertion sequences (IS) encode an enzyme, transposase, that is required for excising and inserting the mobile element	Back alignment and domain information

>PF03108 DBD_Tnp_Mut: MuDR family transposase; InterPro: IPR004332 The plant MuDR transposase domain is present in plant proteins that are presumed to be the transposases for Mutator transposable elements [, ]	Back alignment and domain information

>COG3328 Transposase and inactivated derivatives [DNA replication, recombination, and repair]	Back alignment and domain information

>smart00575 ZnF_PMZ plant mutator transposase zinc finger	Back alignment and domain information

>PF08731 AFT: Transcription factor AFT; InterPro: IPR014842 AFT (activator of iron transcription) is an iron regulated transcriptional activator that regulates the expression of genes involved in iron homeostasis	Back alignment and domain information

>smart00666 PB1 PB1 domain	Back alignment and domain information

>PF03101 FAR1: FAR1 DNA-binding domain; InterPro: IPR004330 Phytochrome A is the primary photoreceptor for mediating various far-red light-induced responses in higher plants	Back alignment and domain information

>PF04434 SWIM: SWIM zinc finger; InterPro: IPR007527 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule	Back alignment and domain information

>cd05992 PB1 The PB1 domain is a modular domain mediating specific protein-protein interactions which play a role in many critical cell processes, such as osteoclastogenesis, angiogenesis, early cardiovascular development, and cell polarity	Back alignment and domain information

>PF00564 PB1: PB1 domain; InterPro: IPR000270 The Phox and Bem1p domain, is present in many eukaryotic cytoplasmic signalling proteins	Back alignment and domain information

>cd06407 PB1_NLP A PB1 domain is present in NIN like proteins (NLP), a key enzyme in a process of establishment of symbiosis betweeen legumes and nitrogen fixing bacteria (Rhizobium)	Back alignment and domain information

>cd06408 PB1_NoxR The PB1 domain is present in the Epichloe festucae NoxR protein (NADPH oxidase regulator), a key regulator of NADPH oxidase isoform, NoxA	Back alignment and domain information

>cd06406 PB1_P67 A PB1 domain is present in p67 proteins which forms a signaling complex with p40, a crucial step for activation of NADPH oxidase during phagocytosis	Back alignment and domain information

>cd06396 PB1_NBR1 The PB1 domain is an essential part of NBR1 protein, next to BRCA1, a scaffold protein mediating specific protein-protein interaction with both titin protein kinase and with another scaffold protein p62	Back alignment and domain information

>cd06398 PB1_Joka2 The PB1 domain is present in the Nicotiana plumbaginifolia Joka2 protein which interacts with sulfur stress inducible UP9 protein	Back alignment and domain information

>cd06404 PB1_aPKC PB1 domain is an essential modular domain of the atypical protein kinase C (aPKC) which in complex with Par6 and Par3 proteins is crucial for establishment of apical-basal polarity of animal cells	Back alignment and domain information

>cd06402 PB1_p62 The PB1 domain is an essential part of p62 scaffold protein (alias sequestosome 1,SQSTM) involved in cell signaling, receptor internalization, and protein turnover	Back alignment and domain information

>PF04684 BAF1_ABF1: BAF1 / ABF1 chromatin reorganising factor; InterPro: IPR006774 ABF1 is a sequence-specific DNA binding protein involved in transcription activation, gene silencing and initiation of DNA replication	Back alignment and domain information

>cd06403 PB1_Par6 The PB1 domain is an essential part of Par6 protein which in complex with Par3 and aPKC proteins is crucial for establishment of apical-basal polarity of animal cells	Back alignment and domain information

>PF06782 UPF0236: Uncharacterised protein family (UPF0236); InterPro: IPR009620 This is a group of proteins of unknown function	Back alignment and domain information

>PF15288 zf-CCHC_6: Zinc knuckle	Back alignment and domain information

>cd06397 PB1_UP1 Uncharacterized protein 1	Back alignment and domain information

>cd06409 PB1_MUG70 The MUG70 protein is a product of the meiotically up-regulated gene 70 which has a role in meiosis and harbors a PB1 domain	Back alignment and domain information

>PF00098 zf-CCHC: Zinc knuckle; InterPro: IPR001878 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule	Back alignment and domain information

>PF01610 DDE_Tnp_ISL3: Transposase; InterPro: IPR002560 Autonomous mobile genetic elements such as transposon or insertion sequences (IS) encode an enzyme, transposase, that is required for excising and inserting the mobile element	Back alignment and domain information

>PF03050 DDE_Tnp_IS66: Transposase IS66 family ; InterPro: IPR004291 Transposase proteins are necessary for efficient DNA transposition	Back alignment and domain information

>cd06401 PB1_TFG The PB1 domain found in TFG protein, an oncogenic gene product and fusion partner to nerve growth factor tyrosine kinase receptor TrkA and to the tyrosine kinase ALK	Back alignment and domain information

>cd06405 PB1_Mekk2_3 The PB1 domain is present in the two mitogen-activated protein kinase kinases MEKK2 and MEKK3 which are two members of the signaling kinase cascade involved in angiogenesis and early cardiovascular development	Back alignment and domain information

>cd06411 PB1_p51 The PB1 domain is present in the p51 protein, a homolog of the p67 protein	Back alignment and domain information

>PF13610 DDE_Tnp_IS240: DDE domain	Back alignment and domain information

>PRK14702 insertion element IS2 transposase InsD; Provisional	Back alignment and domain information

>PF03106 WRKY: WRKY DNA -binding domain; InterPro: IPR003657 The WRKY domain is a 60 amino acid region that is defined by the conserved amino acid sequence WRKYGQK at its N-terminal end, together with a novel zinc-finger- like motif	Back alignment and domain information

>PHA02517 putative transposase OrfB; Reviewed	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		1282
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-13
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-09
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-08
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-07

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

 Score = 73.7 bits (180), Expect = 3e-13
 Identities = 79/601 (13%), Positives = 169/601 (28%), Gaps = 183/601 (30%)

Query: 559  LSVNKESSFDELKLEMAEMWKYDPNSMIVKYFLPNNNKTLITISG--DKDIRRLIDFHED 616
             +V++   + +L+  + E+    P   ++   +  + KT + +       ++  +DF   
Sbjct: 129  YNVSRLQPYLKLRQALLEL---RPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFK-- 183

Query: 617  SGTVDVY-VMVGEKPTDDALTNPCSRSSRTTGAESVTPSDNLIPLPSVSGDMVL-LNTLF 674
                 ++ + +    + + +     +          + SD+   +      +   L  L 
Sbjct: 184  -----IFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLL 238

Query: 675  PAASDAGDTRQLSNSAPAGSDLRQQKLIKSWK-NCITGVHQRFNNVHDFRDALYKYSVA- 732
                    ++   N      +++  K   ++  +C   +  RF  V DF  A     ++ 
Sbjct: 239  -------KSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISL 291

Query: 733  ----HGFTYCFKKNEGLRVTAK---CKAEGCPWRIHASRVPTTQLFQIKTMNGMHTCKAG 785
                   T     +E   +  K   C+ +  P  +                         
Sbjct: 292  DHHSMTLT----PDEVKSLLLKYLDCRPQDLPREV---------------------LTTN 326

Query: 786  PDPTTRSKASRKLLASIVKEKLLEAPKCKPKEIAEEIRRDFGIELGYVKAWRALENARGE 845
            P              SI+ E + +               D          W+        
Sbjct: 327  P-----------RRLSIIAESIRDGL----------ATWDN---------WK-------- 348

Query: 846  SQVSYKDSYNQLPWLVDKILETNPGSVVTLSTREDLSFHHLFVALHASLYGFQNGCRPLI 905
              V+            DK+      S+  L   E   +  +F  L              +
Sbjct: 349  -HVNC-----------DKLTTIIESSLNVLEPAE---YRKMFDRL-------------SV 380

Query: 906  FLDSFPIKSKYQSSLLTA--TALDGNDEIFPVAFGVVDAVSDDNWHWFLLQLKS-ALSTC 962
            F  S  I +     LL+     +  +D +  V      ++ +       + + S  L   
Sbjct: 381  FPPSAHIPTI----LLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELK 436

Query: 963  QSITFVTDRLGQLRASILSVFENSY---YCYCLHHLTEELKRDLKGSYTEEVVSVIVAHL 1019
              +    +    L  SI+    + Y     +    L      D    Y     S I  HL
Sbjct: 437  VKL----ENEYALHRSIV----DHYNIPKTFDSDDLIP-PYLD---QY---FYSHIGHHL 481

Query: 1020 YDAAQAGTLDEFSK-FIDSIKSVSSEAFDWI---LRSEPENWANALFKGSRHNQMT---- 1071
             +      +  F   F+D         F ++   +R +   W      GS  N +     
Sbjct: 482  KNIEHPERMTLFRMVFLD---------FRFLEQKIRHDSTAWNA---SGSILNTLQQLKF 529

Query: 1072 --SHIAESFYCWVGELPELPIVQIISTICRKIMELMYSRRMDSNQWLTKLTPSLEDKLQN 1129
               +I ++         E    ++++ I      L +  +++ N   +K T  L   L  
Sbjct: 530  YKPYICDN-----DPKYE----RLVNAI------LDFLPKIEENLICSKYTDLLRIALMA 574

Query: 1130 E 1130
            E
Sbjct: 575  E 575

PyMOL of 1vt4

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		1282
2cu1_A		103	Mitogen-activated protein kinase kinase kinase 2;	97.37
1vd2_A		89	Protein kinase C, IOTA type; PB1 domain, OPCA moti	96.77
1oey_A		83	P67-PHOX, neutrophil cytosol factor 2; immune syst	96.03
2kkc_A		102	Sequestosome-1; P62, PB1, autophagy, ubiquitin-pro	94.94
1q1o_A		98	Cell division control protein 24; PB1 domain, PCCR	93.9
1wmh_B		86	Partitioning defective-6 homolog alpha; kinase, PB	93.85
2ktr_A		117	Sequestosome-1; autophagy, NF-KB signaling, HOMO-o	93.68
1pqs_A		77	Cell division control protein 24; alpha and beta p	93.32
2jrh_A		94	Mitogen-activated protein kinase kinase kinase 3;	91.84
2npt_B		100	Mitogen-activated protein kinase kinase kinase 2;	90.12
2c60_A		111	Human mitogen-activated protein kinase kinase kina	89.83
2bkf_A		87	Zinc-finger protein NBR1 (NEXT to breast cancer 1;	89.44
2ayd_A		76	WRKY transcription factor 1; beta strands, zinc fi	85.93
3hot_A		345	Transposable element mariner, complete CDS; protei	85.1
1wj2_A		78	Probable WRKY transcription factor 4; DNA-binding	85.08
1wj6_A		101	KIAA0049 protein, RSGI RUH-024; PB1 domain, protei	83.95
1nc8_A		29	Nucleocapsid protein; HIV-2, RNA recognition, zinc	83.63
1ip9_A		85	BEM1 protein; ubiquitin alpha/beta roll, signaling	80.55

>2cu1_A Mitogen-activated protein kinase kinase kinase 2; PB1 domain, MAPK/ERK kinase kinase 2, MEK kinase 2, MEKK 2, signaling protein; NMR {Homo sapiens} SCOP: d.15.2.2	Back alignment and structure

Probab=97.37  E-value=0.00097  Score=62.40  Aligned_cols=69  Identities=16%  Similarity=0.400  Sum_probs=61.0

Q ss_pred             CCceeEEEEcCCCChHHHHHHHHHhcCCCCCceEEEEEecCCCCceEEeechHHHHHHHHhhcCc---CeEEEEEeec
Q 039468          553 GGDAHALSVNKESSFDELKLEMAEMWKYDPNSMIVKYFLPNNNKTLITISGDKDIRRLIDFHEDS---GTVDVYVMVG  627 (1282)
Q Consensus       553 GG~t~~i~Vdr~iSf~ef~~kL~e~~~~~~~~~~lky~LP~~~~~Li~v~dD~Dl~~M~e~~~~~---~~v~IYve~~  627 (1282)
                      +|+++++.++|-++|+||..|+.+.||.   ++-|+|+   |+..+|+|.+++||++.++..+..   ..+.|++...
T Consensus        16 ~GEkRIi~f~RPv~f~eL~~Kv~~~fGq---~ldL~y~---n~EllIpl~sQeDLDkaIellDrss~~kSLrIlL~~~   87 (103)
T 2cu1_A           16 RGEKRILQFPRPVKLEDLRSKAKIAFGQ---SMDLHYT---NNELVIPLTTQDDLDKAVELLDRSIHMKSLKILLVIN   87 (103)
T ss_dssp             TTEEEEEEEESSCCHHHHHHHHHHHHSS---CEEEEEC---SSSSCEECCSHHHHHHHHHHHHHCSSCCSEEEEEEEC
T ss_pred             cCeEEEEeccCCccHHHHHHHHHHHhCC---eeeEEEe---cceEEEeccCHHHHHHHHHHHccCCcccceEEEEecC
Confidence            8999999999999999999999999986   4889999   777899999999999999886654   5688888774

PyMOL of 2cu1

>1vd2_A Protein kinase C, IOTA type; PB1 domain, OPCA motif, APKC, ZIP/P62, MEK5, molecular recognition, transferase; NMR {Homo sapiens} SCOP: d.15.2.2 PDB: 1wmh_A	Back alignment and structure

>1oey_A P67-PHOX, neutrophil cytosol factor 2; immune system, PB1 heterodimer/complex, NADPH oxidase, PB1 D heterodimerization; 2.0A {Homo sapiens} SCOP: d.15.2.2	Back alignment and structure

>2kkc_A Sequestosome-1; P62, PB1, autophagy, ubiquitin-proteasome system, NF-KB signaling, alternative splicing, apoptosis, cytoplasm, differentiation; NMR {Rattus norvegicus} PDB: 2ktr_B	Back alignment and structure

>1q1o_A Cell division control protein 24; PB1 domain, PCCR, PC motif, OPCA motif, yeast, cell polarity, protein-protein interaction; NMR {Saccharomyces cerevisiae} SCOP: d.15.2.2 PDB: 2kfj_A 2kfk_B	Back alignment and structure

>1wmh_B Partitioning defective-6 homolog alpha; kinase, PB1 domain, OPCA motif, APKC, cell polarity, transferase/cell cycle complex; 1.50A {Homo sapiens} SCOP: d.15.2.2	Back alignment and structure

>2ktr_A Sequestosome-1; autophagy, NF-KB signaling, HOMO-oligomer, PB1 dimer, signaling protein, transport protein; NMR {Rattus norvegicus}	Back alignment and structure

>1pqs_A Cell division control protein 24; alpha and beta protein, cell cycle; NMR {Saccharomyces cerevisiae} SCOP: d.15.2.2 PDB: 1tz1_A	Back alignment and structure

>2jrh_A Mitogen-activated protein kinase kinase kinase 3; kinase signaling domain, transferase; NMR {Homo sapiens} PDB: 2pph_A	Back alignment and structure

>2npt_B Mitogen-activated protein kinase kinase kinase 2; MAP2K5, MEK5, MKK PRKMK5, MAP kinase kinase 5, PHOX, PHOX-domain; 1.75A {Homo sapiens} SCOP: d.15.2.2	Back alignment and structure

>2c60_A Human mitogen-activated protein kinase kinase kinase 3 isoform 2; MAP3K3, MAP/ERK kinase kinase 3, MAPKKK3, MEKK3, serine threonine phosphorylation; HET: MSE; 1.25A {Homo sapiens} SCOP: d.15.2.2 PDB: 2o2v_B	Back alignment and structure

>2bkf_A Zinc-finger protein NBR1 (NEXT to breast cancer 1; PB1 domain, interaction domain, Z finger; 1.56A {Homo sapiens} SCOP: d.15.2.2 PDB: 2g4s_A	Back alignment and structure

>2ayd_A WRKY transcription factor 1; beta strands, zinc finger; 1.60A {Arabidopsis thaliana}	Back alignment and structure

>3hot_A Transposable element mariner, complete CDS; protein-DNA complex, synaptic complex, transposase, inverted DNA, DNA binding protein-DNA complex; HET: 5IU; 3.25A {Drosophila mauritiana} PDB: 3hos_A*	Back alignment and structure

>1wj2_A Probable WRKY transcription factor 4; DNA-binding domain, zinc-binding, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.79.1.1 PDB: 2lex_A*	Back alignment and structure

>1wj6_A KIAA0049 protein, RSGI RUH-024; PB1 domain, protein binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: d.15.2.2	Back alignment and structure

>1nc8_A Nucleocapsid protein; HIV-2, RNA recognition, zinc finger, viral protein; NMR {Human immunodeficiency virus 2} SCOP: g.40.1.1 PDB: 2di2_A	Back alignment and structure

>1ip9_A BEM1 protein; ubiquitin alpha/beta roll, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.15.2.2 PDB: 1ipg_A 2kfk_A	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		1282
d1ip9a_		85	Bud emergence mediator Bemp1 {Baker's yeast (Sacch	95.87
d2bkfa1		85	Next to BRCA1 gene 1 protein, NBR1 (KIAA0049) {Hum	94.34
d2c60a1		80	Mitogen-activated protein kinase kinase kinase 3,	90.85
d1wmha_		83	Protein kinase C, iota type {Human (Homo sapiens)	90.54
d2nptb1		82	Mitogen-activated protein kinase kinase kinase 2,	89.51
d1wj2a_		71	WRKY DNA-binding protein 4 {Thale cress (Arabidops	89.35
d1nc8a_		29	HIV nucleocapsid {Human immunodeficiency virus typ	86.2
d1oeya_		82	Neutrophil cytosol factor 2 (p67phox component of	84.06

>d1ip9a_ d.15.2.2 (A:) Bud emergence mediator Bemp1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}	Back information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: beta-Grasp (ubiquitin-like)
superfamily: CAD & PB1 domains
family: PB1 domain
domain: Bud emergence mediator Bemp1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.87  E-value=0.0071  Score=53.79  Aligned_cols=58  Identities=16%  Similarity=0.217  Sum_probs=47.4

Q ss_pred             CCceeEEEEcCCCChHHHHHHHHHhcCCCCCceEEEEEecCCCCceEEeechHHHHHHHHhh
Q 039468          553 GGDAHALSVNKESSFDELKLEMAEMWKYDPNSMIVKYFLPNNNKTLITISGDKDIRRLIDFH  614 (1282)
Q Consensus       553 GG~t~~i~Vdr~iSf~ef~~kL~e~~~~~~~~~~lky~LP~~~~~Li~v~dD~Dl~~M~e~~  614 (1282)
                      +++++.+.|..+++|.+|.++|.+.|+.  +++.++|.  .++..++.|.+|+||+.+++..
T Consensus        20 ~~D~~~~~l~~~it~~dL~~kI~~rf~~--~~~~lkY~--Dedgd~v~i~sD~Dl~~ai~~~   77 (85)
T d1ip9a_          20 KDDIFALMLKGDTTYKELRSKIAPRIDT--DNFKLQTK--LFDGSGEEIKTDSQVSNIIQAK   77 (85)
T ss_dssp             TTCCEEEEECSCCCHHHHHHHHHHHHTS--SCEEEEEC--CSSSCCSCCCSHHHHHHHHHTT
T ss_pred             CCcEEEEEeCCCCCHHHHHHHHHHHhCC--CceEEEEE--cCCCCEEEEeCHHHHHHHHHhc
Confidence            3456678899999999999999999975  45888887  3345678999999999999833

PyMOL of d1ip9a_

>d2bkfa1 d.15.2.2 (A:1-85) Next to BRCA1 gene 1 protein, NBR1 (KIAA0049) {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d2c60a1 d.15.2.2 (A:43-122) Mitogen-activated protein kinase kinase kinase 3, MEKK 3 {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1wmha_ d.15.2.2 (A:) Protein kinase C, iota type {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d2nptb1 d.15.2.2 (B:42-123) Mitogen-activated protein kinase kinase kinase 2, MEKK 2 {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure

>d1wj2a_ g.79.1.1 (A:) WRKY DNA-binding protein 4 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}	Back information, alignment and structure

>d1nc8a_ g.40.1.1 (A:) HIV nucleocapsid {Human immunodeficiency virus type 2 [TaxId: 11709]}	Back information, alignment and structure

>d1oeya_ d.15.2.2 (A:) Neutrophil cytosol factor 2 (p67phox component of NADPH oxidase) {Human (Homo sapiens) [TaxId: 9606]}	Back information, alignment and structure