Citrus Sinensis ID: 039479

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180--
Protein Sequence
MDHPQVFSSQMNQFNWVEASLVRARSSIREAALVRNLTSVHQDPDYVPRGPIYRNANAFHRSYLLMEKLFKIYVYEEGEPPMFHDGPCKSIYSTEGRFIHEMERSNTYKTKDPEKALVYFLPFSVVMMVEHLYVPGAHEINAIGHSIVDYISIISHKYPFWNRSLGADHFMLSCHDWVRNSS
Secondary Structure (PSIPRED)
ccccccHHcccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHccccEEEEccccccccccccccccccHHHHHHHHHHHcccccccccccccEEEEcEEcccHHHHccccccccHHHHHHHHHHHHHHHHHHccHHHccccccEEEEEccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccHHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHHcEEEEEccccccccccccccccEHHHHHHHHHHHccccEEEccccHcEEEEEEEEHHHHHHccccccccccHHHHHHHHHHHHHHHHccccccccccccEEEEEccccccccc
Coil and Loop (DISEMBL)
mdhpqvfssqmnqfNWVEASLVRARSSIREAALVRNLtsvhqdpdyvprgpiyrnanAFHRSYLLMEKLFKIYVyeegeppmfhdgpcksiystegrfihemersntyktkdpekalVYFLPFSVVMMVEHLyvpgaheinaIGHSIVDYISIIShkypfwnrslgadhfmlschdwvrnss
Flexible Loop (DISEMBL)
mdhpqvfssqmnqfnWVEASLVRARSSIREAALVrnltsvhqdpdyvprgPIYRNANAFHRSYLLMEKLFKIYVYEEGeppmfhdgpCKSIYSTEGRFIHEMErsntyktkdpeKALVYFLPFSVVMMVEHLYVPGAHEINAIGHSIVDYISIISHKYPFWNRSLGADHFMLSCHDWVRNSS
Low Complexity Region (SEG)
MDHPQVFSSQMNQFNWVEASLVRARSSIREAALVRNLTSVHQDPDYVPRGPIYRNANAFHRSYLLMEKLFKIYVYEEGEPPMFHDGPCKSIYSTEGRFIHEMERSNTYKTKDPEKALVYFLPFSVVMMVEHLYVPGAHEINAIGHSIVDYISIISHKYPFWNRSLGADHFMLSCHDWVRNSS
Disordered region (IsUnstruct)
************QFNWVEASLVRARSSIREAALVRNLTSVHQDPDYVPRGPIYRNANAFHRSYLLMEKLFKIYVYEEGEPPMFHDGPCKSIYSTEGRFIHEM**********PEKALVYFLPFSVVMMVEHLYVPGAHEINAIGHSIVDYISIISHKYPFWNRSLGADHFMLSCHDWV****
Disordered Region (DISOPRED)
*********************VRARSSI*****************YVPRGPIYRNANAFHRSYLLMEKLFKIYVYEEGEPPMFHDGPCKSIYSTEGRFIHEMERSNTYKTKDPEKALVYFLPFSVVMMVEHLYVPGAHEINAIGHSIVDYISIISHKYPFWNRSLGADHFMLSCHDWVR***
Disordered Region (DISEMBL)
MDHPQVFSSQMNQFNWVEASLVRARSSIREAALVRNLTSVHQDPDYVPRGPIYRNANAFHRSYLLMEKLFKIYVYEEGEPPMFHDGPCKSIYSTEGRFIHEMERSNTYKTKDPEKALVYFLPFSVVMMVEHLYVPGAHEINAIGHSIVDYISIISHKYPFWNRSLGADHFMLSCHDWVRNSS
Disordered Region (DISPRO)
*************FNWVEASLVRARSSIREAALVRNLTSVHQDPDYVPRGPIYRNANAFHRSYLLMEKLFKIYVYEEGEPPMFHDGPCKSIYSTEGRFIHEMERSNTYKTKDPEKALVYFLPFSVVMMVEHLYVPGAHEINAIGHSIVDYISIISHKYPFWNRSLGADHFMLSCHDWV****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MDHPQVFSSQMNQFNWVEASLVRARSSIREAALVRNLTSVHQDPDYVPRGPIYRNANAFHRSYLLMEKLFKIYVYEEGEPPMFHDGPCKSIYSTEGRFIHEMERSNTYKTKDPEKALVYFLPFSVVMMVEHLYVPGAHEINAIGHSIVDYISIISHKYPFWNRSLGADHFMLSCHDWVRNSS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	182	2.2.26 [Sep-21-2011]
Q9SSE8	470	Probable glycosyltransfer	yes	no	0.884	0.342	0.603	8e-49
Q3E7Q9	480	Probable glycosyltransfer	no	no	0.901	0.341	0.538	4e-47
Q9FFN2	518	Probable glycosyltransfer	no	no	0.895	0.314	0.520	1e-46
Q3E9A4	466	Probable glycosyltransfer	no	no	0.934	0.364	0.456	1e-39
Q9LFP3	480	Probable glycosyltransfer	no	no	0.912	0.345	0.430	6e-35
Q3EAR7	470	Probable glycosyltransfer	no	no	0.791	0.306	0.457	6e-33
Q94AA9	500	Xylogalacturonan beta-1,3	no	no	0.686	0.25	0.411	3e-27
Q7XLG3	420	Probable glucuronosyltran	no	no	0.417	0.180	0.329	1e-05
Q9ZUV3	448	Probable glucuronoxylan g	no	no	0.554	0.225	0.305	1e-05
Q6H4N0	434	Probable glucuronosyltran	no	no	0.423	0.177	0.312	2e-05

>sp|Q9SSE8|GLYT1_ARATH Probable glycosyltransferase At3g07620 OS=Arabidopsis thaliana GN=At3g07620 PE=3 SV=1

 Score =  192 bits (489), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 99/164 (60%), Positives = 115/164 (70%), Gaps = 3/164 (1%)

Query: 17  VEASLVRARSSIREAAL--VRNLTSVHQDPDYVPRGPIYRNANAFHRSYLLMEKLFKIYV 74
           VEA L  AR  IREA L      +S   D DYVP G IYRN  AFHRSYLLMEK+FKIYV
Sbjct: 88  VEAELATARVLIREAQLNYSSTTSSPLGDEDYVPHGDIYRNPYAFHRSYLLMEKMFKIYV 147

Query: 75  YEEGEPPMFHDGPCKSIYSTEGRFIHEMERSN-TYKTKDPEKALVYFLPFSVVMMVEHLY 133
           YEEG+PP+FH G CK IYS EG F++ ME     Y+T+DP+KA VYFLPFSVVM++ HL+
Sbjct: 148 YEEGDPPIFHYGLCKDIYSMEGLFLNFMENDVLKYRTRDPDKAHVYFLPFSVVMILHHLF 207

Query: 134 VPGAHEINAIGHSIVDYISIISHKYPFWNRSLGADHFMLSCHDW 177
            P   +   +   I DY+ IIS KYP+WN S G DHFMLSCHDW
Sbjct: 208 DPVVRDKAVLERVIADYVQIISKKYPYWNTSDGFDHFMLSCHDW 251

May be involved in cell wall biosynthesis.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: -EC: .EC: -

>sp|Q3E7Q9|GLYT6_ARATH Probable glycosyltransferase At5g25310 OS=Arabidopsis thaliana GN=At5g25310 PE=3 SV=2

 Score =  187 bits (474), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 91/169 (53%), Positives = 118/169 (69%), Gaps = 5/169 (2%)

Query: 10  QMNQFNWVEASLVRARSSIREAALVRNLTSVHQDPDYVPRGPIYRNANAFHRSYLLMEKL 69
           ++N+ N VE  L +AR+SI EA+   N T    D   +P   IYRN +A +RSYL MEK 
Sbjct: 94  KLNRRNLVEQGLAKARASILEASSNVNTTLFKSD---LPNSEIYRNPSALYRSYLEMEKR 150

Query: 70  FKIYVYEEGEPPMFHDGPCKSIYSTEGRFIHEMERSNT-YKTKDPEKALVYFLPFSVVMM 128
           FK+YVYEEGEPP+ HDGPCKS+Y+ EGRFI EME+  T ++T DP +A VYFLPFSV  +
Sbjct: 151 FKVYVYEEGEPPLVHDGPCKSVYAVEGRFITEMEKRRTKFRTYDPNQAYVYFLPFSVTWL 210

Query: 129 VEHLYVPGAHEINAIGHSIVDYISIISHKYPFWNRSLGADHFMLSCHDW 177
           V +LY  G  +   +   + DYI ++S  +PFWNR+ GADHFML+CHDW
Sbjct: 211 VRYLY-EGNSDAKPLKTFVSDYIRLVSTNHPFWNRTNGADHFMLTCHDW 258

May be involved in cell wall biosynthesis.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: -

EC: .

EC: -

>sp|Q9FFN2|GLYT3_ARATH Probable glycosyltransferase At5g03795 OS=Arabidopsis thaliana GN=At5g03795 PE=3 SV=2

 Score =  185 bits (470), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 87/167 (52%), Positives = 121/167 (72%), Gaps = 4/167 (2%)

Query: 11  MNQFNWVEASLVRARSSIREAALVRNLTSVHQDPDYVPRGPIYRNANAFHRSYLLMEKLF 70
           ++    +E  L +AR+SI+ A++   +         VP GP+Y NA  FHRSYL MEK F
Sbjct: 135 LSNLEKIEFKLQKARASIKAASMDDPVDDPDY----VPLGPMYWNAKVFHRSYLEMEKQF 190

Query: 71  KIYVYEEGEPPMFHDGPCKSIYSTEGRFIHEMERSNTYKTKDPEKALVYFLPFSVVMMVE 130
           KIYVY+EGEPP+FHDGPCKSIYS EG FI+E+E    ++T +P+KA V++LPFSVV MV 
Sbjct: 191 KIYVYKEGEPPLFHDGPCKSIYSMEGSFIYEIETDTRFRTNNPDKAHVFYLPFSVVKMVR 250

Query: 131 HLYVPGAHEINAIGHSIVDYISIISHKYPFWNRSLGADHFMLSCHDW 177
           ++Y   + + + I +++ DYI+++  KYP+WNRS+GADHF+LSCHDW
Sbjct: 251 YVYERNSRDFSPIRNTVKDYINLVGDKYPYWNRSIGADHFILSCHDW 297

May be involved in cell wall biosynthesis.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: -

EC: .

EC: -

>sp|Q3E9A4|GLYT5_ARATH Probable glycosyltransferase At5g20260 OS=Arabidopsis thaliana GN=At5g20260 PE=3 SV=3

 Score =  162 bits (410), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 79/173 (45%), Positives = 116/173 (67%), Gaps = 3/173 (1%)

Query: 12  NQFNWVEASLVRARSSIREAALVRNLTSVHQDPDYVPRGPIYRNANAFHRSYLLMEKLFK 71
           N+ N +E  L ++RS+IREA  ++   S  ++  +VPRG +YRNA AFH+S++ MEK FK
Sbjct: 80  NKRNIIEEGLAKSRSAIREAVRLKKFVS-DKEETFVPRGAVYRNAFAFHQSHIEMEKKFK 138

Query: 72  IYVYEEGEPPMFHDGPCKSIYSTEGRFIHEMERS-NTYKTKDPEKALVYFLPFSVVMMVE 130
           ++VY EGE P+ H GP  +IYS EG+F+ E+E   + +   +PE+A  + LP SV  +V 
Sbjct: 139 VWVYREGETPLVHMGPMNNIYSIEGQFMDEIETGMSPFAANNPEEAHAFLLPVSVANIVH 198

Query: 131 HLYVPGAHEINAIGHSI-VDYISIISHKYPFWNRSLGADHFMLSCHDWVRNSS 182
           +LY P         H + +DY+ +++HKYP+WNRSLGADHF +SCHDW  + S
Sbjct: 199 YLYRPLVTYSREQLHKVFLDYVDVVAHKYPYWNRSLGADHFYVSCHDWAPDVS 251

May be involved in cell wall biosynthesis.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: -

EC: .

EC: -

>sp|Q9LFP3|GLYT4_ARATH Probable glycosyltransferase At5g11130 OS=Arabidopsis thaliana GN=At5g11120/At5g11130 PE=3 SV=2

 Score =  146 bits (369), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 74/172 (43%), Positives = 111/172 (64%), Gaps = 6/172 (3%)

Query: 17  VEASLVRARSSIREAA---LVRNLTSVHQ-DPDYVPRGPIYRNANAFHRSYLLMEKLFKI 72
           +E  L  AR++IR+A    L R+    +  D   V  G +Y NA  FH+S+  MEK FKI
Sbjct: 92  IEEGLAMARAAIRKAGEKNLRRDRDRTNNSDVGVVSNGSVYLNAFTFHQSHKEMEKRFKI 151

Query: 73  YVYEEGEPPMFHDGPCKSIYSTEGRFIHEMERSNT-YKTKDPEKALVYFLPFSVVMMVEH 131
           + Y EGE P+FH GP  +IY+ EG+F+ E+E  N+ +K   PE+A V+++P  +V ++  
Sbjct: 152 WTYREGEAPLFHKGPLNNIYAIEGQFMDEIENGNSRFKAASPEEATVFYIPVGIVNIIRF 211

Query: 132 LYVP-GAHEINAIGHSIVDYISIISHKYPFWNRSLGADHFMLSCHDWVRNSS 182
           +Y P  ++  + + + + DYIS+IS++YP+WNRS GADHF LSCHDW  + S
Sbjct: 212 VYRPYTSYARDRLQNIVKDYISLISNRYPYWNRSRGADHFFLSCHDWAPDVS 263

May be involved in cell wall biosynthesis.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: -

EC: .

EC: -

>sp|Q3EAR7|GLYT2_ARATH Probable glycosyltransferase At3g42180 OS=Arabidopsis thaliana GN=At3g42180 PE=2 SV=2

 Score =  140 bits (352), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 70/153 (45%), Positives = 98/153 (64%), Gaps = 9/153 (5%)

Query: 35  RNLTSVHQDPDYVPRGPIYRNANAFHRSYLLMEKLFKIYVYEEGEPPMFHDGPCKSIYST 94
           +N TS  +   Y+P G IYRN+ AFH+S++ M K FK++ Y+EGE P+ HDGP   IY  
Sbjct: 99  KNCTSNEEVITYIPTGQIYRNSFAFHQSHIEMMKTFKVWSYKEGEQPLVHDGPVNDIYGI 158

Query: 95  EGRFIHEME-----RSNTYKTKDPEKALVYFLPFSVVMMVEHLYVPGAHEIN---AIGHS 146
           EG+FI E+       S  ++   PE+A  +FLPFSV  +V ++Y P     +   A  H 
Sbjct: 159 EGQFIDELSYVMGGPSGRFRASRPEEAHAFFLPFSVANIVHYVYQPITSPADFNRARLHR 218

Query: 147 IV-DYISIISHKYPFWNRSLGADHFMLSCHDWV 178
           I  DY+ +++HK+PFWN+S GADHFM+SCHDW 
Sbjct: 219 IFNDYVDVVAHKHPFWNQSNGADHFMVSCHDWA 251

May be involved in cell wall biosynthesis.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: -

EC: .

EC: -

>sp|Q94AA9|XGD1_ARATH Xylogalacturonan beta-1,3-xylosyltransferase OS=Arabidopsis thaliana GN=XGD1 PE=1 SV=2

 Score =  120 bits (302), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 56/136 (41%), Positives = 83/136 (61%), Gaps = 11/136 (8%)

Query: 52  IYRNANAFHRSYLLMEKLFKIYVYEEGEPPMFHDGPCKSIYSTEGRFIHEM-----ERSN 106
           +Y+N  AFH+S+  M   FK++ Y EGE P+FHDGP   IY  EG+F+ EM     +  +
Sbjct: 146 LYKNPAAFHQSHTEMMNRFKVWTYTEGEVPLFHDGPVNDIYGIEGQFMDEMCVDGPKSRS 205

Query: 107 TYKTKDPEKALVYFLPFSVVMMVEHLYVPGAHEINAIGHS-----IVDYISIISHKYPFW 161
            ++   PE A V+F+PFSV  ++  +Y P    +     +     I DY+ +++ K+P+W
Sbjct: 206 RFRADRPENAHVFFIPFSVAKVIHFVYKP-ITSVEGFSRARLHRLIEDYVDVVATKHPYW 264

Query: 162 NRSLGADHFMLSCHDW 177
           NRS G DHFM+SCHDW
Sbjct: 265 NRSQGGDHFMVSCHDW 280

Involved in pectin biosynthesis. Catalyzes the transfer of xylose from UDP-xylose onto oligogalacturonides and endogenous acceptors.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: 2

EC: .

EC: 4

EC: 1

>sp|Q7XLG3|GT42_ORYSJ Probable glucuronosyltransferase Os04g0398600 OS=Oryza sativa subsp. japonica GN=Os04g0398600 PE=2 SV=2

 Score = 49.7 bits (117), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 3/79 (3%)

Query: 98  FIHEMERSNTYKTKDPEKALVYFLPFSVVMMVEHLYVPGAHEINAIGHSIVDYISIISHK 157
           F+H    S+  +T +P++A  ++ P      +    +P   +   +  S + YIS   HK
Sbjct: 86  FMHRFLLSSAVRTLNPKEADWFYTPVYTTCDLTPAGLPLPFKSPRVMRSAIQYIS---HK 142

Query: 158 YPFWNRSLGADHFMLSCHD 176
           +PFWNR+ GADHF +  HD
Sbjct: 143 WPFWNRTDGADHFFVVPHD 161

Involved in the synthesis of glucuronoxylan hemicellulose in secondary cell walls.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 2

EC: .

EC: 4

EC: .

EC: -

EC: .

EC: -

>sp|Q9ZUV3|IRX7_ARATH Probable glucuronoxylan glucuronosyltransferase IRX7 OS=Arabidopsis thaliana GN=IRX7 PE=2 SV=1

 Score = 49.3 bits (116), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 56/118 (47%), Gaps = 17/118 (14%)

Query: 70  FKIYVYEEGEPPMFHDGPCKSIYSTEGRFIHEMERSNTY-------KTKDPEKALVYFLP 122
            KIYVY+   P  F+     +   T   F  E+     +       +T+DP +A  +F+P
Sbjct: 94  LKIYVYDL--PSKFNKDWLANDRCTNHLFAAEVALHKAFLSLEGDVRTEDPYEADFFFVP 151

Query: 123 FSVVMMVEHLYVPGAHEINAIGHS---IVDYISIISHKYPFWNRSLGADHFMLSCHDW 177
             V      +     +   AIGH+   I D I ++S +YPFWNR+ G+DH   + HD+
Sbjct: 152 VYVSCNFSTI-----NGFPAIGHARSLINDAIKLVSTQYPFWNRTSGSDHVFTATHDF 204

Involved in the synthesis of the hemicellulose glucuronoxylan, a major component of secondary cell walls. Probably involved in the synthesis of the glycosyl sequence at the glucuronoxylan reducing end.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q6H4N0|GT21_ORYSJ Probable glucuronosyltransferase Os02g0520750 OS=Oryza sativa subsp. japonica GN=Os02g0520750 PE=2 SV=1

 Score = 48.9 bits (115), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 3/80 (3%)

Query: 98  FIHEMERSNTYKTKDPEKALVYFLPFSVVMMVEHLYVPGAHEINAIGHSIVDYISIISHK 157
           F+H    S+  +T +PE+A  ++ P      + H  +P   +   +  S + ++S    K
Sbjct: 99  FMHRFLLSSAVRTLNPEQADWFYAPVYTTCDLTHAGLPLPFKSPRMMRSAIQFLS---RK 155

Query: 158 YPFWNRSLGADHFMLSCHDW 177
           +PFWNR+ GADHF +  HD+
Sbjct: 156 WPFWNRTDGADHFFVVPHDF 175

Involved in the synthesis of glucuronoxylan hemicellulose in secondary cell walls.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 2

EC: .

EC: 4

EC: .

EC: -

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	182
255567220	507	catalytic, putative [Ricinus communis] g	0.884	0.317	0.801	3e-74
359485862	484	PREDICTED: probable glycosyltransferase	0.884	0.332	0.776	2e-72
296085068	416	unnamed protein product [Vitis vinifera]	0.884	0.387	0.776	2e-72
356518828	505	PREDICTED: probable glycosyltransferase	0.923	0.332	0.627	3e-58
242043198	584	hypothetical protein SORBIDRAFT_02g00518	0.956	0.297	0.609	5e-58
34394613	417	limonene cyclase like protein [Oryza sat	0.972	0.424	0.587	6e-58
115470965	606	Os07g0188700 [Oryza sativa Japonica Grou	0.956	0.287	0.586	7e-57
359481952	546	PREDICTED: probable glycosyltransferase	0.928	0.309	0.601	1e-56
125557509	601	hypothetical protein OsI_25187 [Oryza sa	0.956	0.289	0.586	5e-56
357119191	569	PREDICTED: probable glycosyltransferase	0.956	0.305	0.574	3e-55

>gi|255567220|ref|XP_002524591.1| catalytic, putative [Ricinus communis] gi|223536144|gb|EEF37799.1| catalytic, putative [Ricinus communis]

 Score =  283 bits (723), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 129/161 (80%), Positives = 146/161 (90%)

Query: 17  VEASLVRARSSIREAALVRNLTSVHQDPDYVPRGPIYRNANAFHRSYLLMEKLFKIYVYE 76
           +EASL R RSSIREAA VRNL+SVH DPDYVP+GP+YRNANAFHRSYL MEK FKIYVYE
Sbjct: 124 LEASLARVRSSIREAAQVRNLSSVHDDPDYVPQGPVYRNANAFHRSYLEMEKQFKIYVYE 183

Query: 77  EGEPPMFHDGPCKSIYSTEGRFIHEMERSNTYKTKDPEKALVYFLPFSVVMMVEHLYVPG 136
           EG PPM+HDGPCKSIYS+EGRFIHE+E+   Y+T DP++ALVYFLPFSVVMMVE+LYVP 
Sbjct: 184 EGGPPMYHDGPCKSIYSSEGRFIHELEKGKLYRTLDPDEALVYFLPFSVVMMVEYLYVPD 243

Query: 137 AHEINAIGHSIVDYISIISHKYPFWNRSLGADHFMLSCHDW 177
           +HE NAIG +IVDYI +IS+K+PFWNRSLGADHFMLSCHDW
Sbjct: 244 SHETNAIGRAIVDYIHVISNKHPFWNRSLGADHFMLSCHDW 284

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359485862|ref|XP_002264076.2| PREDICTED: probable glycosyltransferase At5g03795-like [Vitis vinifera]

 Score =  276 bits (707), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 125/161 (77%), Positives = 146/161 (90%)

Query: 17  VEASLVRARSSIREAALVRNLTSVHQDPDYVPRGPIYRNANAFHRSYLLMEKLFKIYVYE 76
           +EA L RARSSIREAA   +L S H+DPDYVP+GPIYRNANAFHRSYL MEKLFKIYVYE
Sbjct: 104 LEAGLARARSSIREAARNGSLKSTHEDPDYVPQGPIYRNANAFHRSYLEMEKLFKIYVYE 163

Query: 77  EGEPPMFHDGPCKSIYSTEGRFIHEMERSNTYKTKDPEKALVYFLPFSVVMMVEHLYVPG 136
           EGEPPMFH+GPCKSIYSTEGRFIHEME+ + Y+T DP++AL+YFLPFSVVMMV++LYVP 
Sbjct: 164 EGEPPMFHNGPCKSIYSTEGRFIHEMEKGSVYRTTDPDQALLYFLPFSVVMMVQYLYVPD 223

Query: 137 AHEINAIGHSIVDYISIISHKYPFWNRSLGADHFMLSCHDW 177
           +HEI+AI  +++DYI++ISH +PFWNRSLGADHFMLSCHDW
Sbjct: 224 SHEIHAIEKTVIDYINLISHNHPFWNRSLGADHFMLSCHDW 264

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296085068|emb|CBI28483.3| unnamed protein product [Vitis vinifera]

 Score =  276 bits (706), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 125/161 (77%), Positives = 146/161 (90%)

Query: 17  VEASLVRARSSIREAALVRNLTSVHQDPDYVPRGPIYRNANAFHRSYLLMEKLFKIYVYE 76
           +EA L RARSSIREAA   +L S H+DPDYVP+GPIYRNANAFHRSYL MEKLFKIYVYE
Sbjct: 36  LEAGLARARSSIREAARNGSLKSTHEDPDYVPQGPIYRNANAFHRSYLEMEKLFKIYVYE 95

Query: 77  EGEPPMFHDGPCKSIYSTEGRFIHEMERSNTYKTKDPEKALVYFLPFSVVMMVEHLYVPG 136
           EGEPPMFH+GPCKSIYSTEGRFIHEME+ + Y+T DP++AL+YFLPFSVVMMV++LYVP 
Sbjct: 96  EGEPPMFHNGPCKSIYSTEGRFIHEMEKGSVYRTTDPDQALLYFLPFSVVMMVQYLYVPD 155

Query: 137 AHEINAIGHSIVDYISIISHKYPFWNRSLGADHFMLSCHDW 177
           +HEI+AI  +++DYI++ISH +PFWNRSLGADHFMLSCHDW
Sbjct: 156 SHEIHAIEKTVIDYINLISHNHPFWNRSLGADHFMLSCHDW 196

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356518828|ref|XP_003528079.1| PREDICTED: probable glycosyltransferase At5g03795-like [Glycine max]

 Score =  229 bits (585), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 106/169 (62%), Positives = 134/169 (79%), Gaps = 1/169 (0%)

Query: 10  QMNQFNWVEASLVRARSSIREAALVRNLTSVHQDPDYVPRGPIYRNANAFHRSYLLMEKL 69
           +  +   +EA L +AR SIREA+ + N T   QDPDYVP+G IYRNANAFHRSYL MEK+
Sbjct: 117 KYTKLGSIEARLAKARYSIREASKIPNFTPTLQDPDYVPQGSIYRNANAFHRSYLEMEKV 176

Query: 70  FKIYVYEEGEPPMFHDGPCKSIYSTEGRFIHEMERSNTYKTKDPEKALVYFLPFSVVMMV 129
           FKI+VYEEGEPP+FH+G  K IY+TEGRFIHEME+   Y+T DP++A VY+LPFSVVM+V
Sbjct: 177 FKIFVYEEGEPPLFHNGLSKDIYATEGRFIHEMEKGRYYRTYDPDEAFVYYLPFSVVMLV 236

Query: 130 EHLYVPGA-HEINAIGHSIVDYISIISHKYPFWNRSLGADHFMLSCHDW 177
           E++Y  G+ + ++ +G  + DYI II+HK+PFWNRSLG DH MLSCHDW
Sbjct: 237 EYVYDRGSNYNLDPLGLVVKDYIQIIAHKHPFWNRSLGHDHVMLSCHDW 285

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242043198|ref|XP_002459470.1| hypothetical protein SORBIDRAFT_02g005180 [Sorghum bicolor] gi|241922847|gb|EER95991.1| hypothetical protein SORBIDRAFT_02g005180 [Sorghum bicolor]

 Score =  229 bits (583), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 106/174 (60%), Positives = 130/174 (74%)

Query: 4   PQVFSSQMNQFNWVEASLVRARSSIREAALVRNLTSVHQDPDYVPRGPIYRNANAFHRSY 63
           PQV  S   +   +E  L +ARS+I EA   ++  S   D DYVP GPIYRNA+AFHRSY
Sbjct: 172 PQVQRSSDIKLERLELGLAKARSAIMEAIRNKDKRSPLPDKDYVPMGPIYRNAHAFHRSY 231

Query: 64  LLMEKLFKIYVYEEGEPPMFHDGPCKSIYSTEGRFIHEMERSNTYKTKDPEKALVYFLPF 123
           L MEK  K+YVYEEGEPP+FHDGPC+SIYSTEGRFIH ME +   +T DP +A V+FLPF
Sbjct: 232 LEMEKQLKVYVYEEGEPPVFHDGPCRSIYSTEGRFIHAMETATRLRTSDPSQAHVFFLPF 291

Query: 124 SVVMMVEHLYVPGAHEINAIGHSIVDYISIISHKYPFWNRSLGADHFMLSCHDW 177
           SVV MV+ +Y PG+H++  +  ++ DY+ +IS KYPFWNRS GADHFMLSCHDW
Sbjct: 292 SVVKMVKTIYEPGSHDMAPLKRTVADYLRVISDKYPFWNRSAGADHFMLSCHDW 345

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|34394613|dbj|BAC83915.1| limonene cyclase like protein [Oryza sativa Japonica Group] gi|50508945|dbj|BAD31849.1| limonene cyclase like protein [Oryza sativa Japonica Group]

 Score =  228 bits (582), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 104/177 (58%), Positives = 135/177 (76%)

Query: 4   PQVFSSQMNQFNWVEASLVRARSSIREAALVRNLTSVHQDPDYVPRGPIYRNANAFHRSY 63
           PQ    +  +   +E  L +AR++IREA   ++      D DYVP GP+YRNA AFHRSY
Sbjct: 206 PQAQRRRDVKLELLELGLAKARATIREAIQNKDNKPPLTDKDYVPVGPVYRNAYAFHRSY 265

Query: 64  LLMEKLFKIYVYEEGEPPMFHDGPCKSIYSTEGRFIHEMERSNTYKTKDPEKALVYFLPF 123
           L MEK+FK++VYEEGEPP+FHDGPC+SIYSTEGRFI+ ME  N  +T+DP++A V+FLPF
Sbjct: 266 LEMEKVFKVFVYEEGEPPVFHDGPCRSIYSTEGRFIYAMEMENRMRTRDPDQAHVFFLPF 325

Query: 124 SVVMMVEHLYVPGAHEINAIGHSIVDYISIISHKYPFWNRSLGADHFMLSCHDWVRN 180
           SVV MV+ +Y P +H+++ +  +I DYI+++S KYP WNRSLGADHFMLSCHDWV N
Sbjct: 326 SVVKMVKMIYEPNSHDMDPLRRTISDYINVVSTKYPHWNRSLGADHFMLSCHDWVSN 382

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|115470965|ref|NP_001059081.1| Os07g0188700 [Oryza sativa Japonica Group] gi|34394611|dbj|BAC83913.1| putative pectin-glucuronyltransferase [Oryza sativa Japonica Group] gi|50508944|dbj|BAD31848.1| putative pectin-glucuronyltransferase [Oryza sativa Japonica Group] gi|113610617|dbj|BAF20995.1| Os07g0188700 [Oryza sativa Japonica Group] gi|125599387|gb|EAZ38963.1| hypothetical protein OsJ_23384 [Oryza sativa Japonica Group] gi|215707162|dbj|BAG93622.1| unnamed protein product [Oryza sativa Japonica Group]

 Score =  225 bits (573), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 102/174 (58%), Positives = 133/174 (76%)

Query: 4   PQVFSSQMNQFNWVEASLVRARSSIREAALVRNLTSVHQDPDYVPRGPIYRNANAFHRSY 63
           PQ    +  +   +E  L +AR++IREA   ++      D DYVP GP+YRNA AFHRSY
Sbjct: 206 PQAQRRRDVKLELLELGLAKARATIREAIQNKDNKPPLTDKDYVPVGPVYRNAYAFHRSY 265

Query: 64  LLMEKLFKIYVYEEGEPPMFHDGPCKSIYSTEGRFIHEMERSNTYKTKDPEKALVYFLPF 123
           L MEK+FK++VYEEGEPP+FHDGPC+SIYSTEGRFI+ ME  N  +T+DP++A V+FLPF
Sbjct: 266 LEMEKVFKVFVYEEGEPPVFHDGPCRSIYSTEGRFIYAMEMENRMRTRDPDQAHVFFLPF 325

Query: 124 SVVMMVEHLYVPGAHEINAIGHSIVDYISIISHKYPFWNRSLGADHFMLSCHDW 177
           SVV MV+ +Y P +H+++ +  +I DYI+++S KYP WNRSLGADHFMLSCHDW
Sbjct: 326 SVVKMVKMIYEPNSHDMDPLRRTISDYINVVSTKYPHWNRSLGADHFMLSCHDW 379

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359481952|ref|XP_002284018.2| PREDICTED: probable glycosyltransferase At5g03795 [Vitis vinifera]

 Score =  224 bits (571), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 104/173 (60%), Positives = 132/173 (76%), Gaps = 4/173 (2%)

Query: 10  QMNQFNWVEASLVRARSSIREAALVRNLTSVHQDPDYVPRGPIYRNANAFHRSYLLMEKL 69
           Q      VEA L RARS+IREA  + N T    DPDY+P GPIY N NAFHRSYL MEK 
Sbjct: 158 QYTTLERVEAGLRRARSAIREAK-IGNRTP---DPDYIPNGPIYWNVNAFHRSYLEMEKQ 213

Query: 70  FKIYVYEEGEPPMFHDGPCKSIYSTEGRFIHEMERSNTYKTKDPEKALVYFLPFSVVMMV 129
            K+YVY+EGEPP+FH+GPCKSIYS EG FIH+ME  + ++TKDPEKA ++FLPFSV M+V
Sbjct: 214 LKVYVYDEGEPPLFHNGPCKSIYSMEGNFIHKMEMDSHFRTKDPEKAHLFFLPFSVAMLV 273

Query: 130 EHLYVPGAHEINAIGHSIVDYISIISHKYPFWNRSLGADHFMLSCHDWVRNSS 182
             +YV  +H++  I  +++DY++++S KYP+WNRSLGADHFML+CHDW   +S
Sbjct: 274 RFVYVRDSHDLGPIKQTVIDYVNVVSTKYPYWNRSLGADHFMLACHDWGPETS 326

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|125557509|gb|EAZ03045.1| hypothetical protein OsI_25187 [Oryza sativa Indica Group]

 Score =  222 bits (565), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 102/174 (58%), Positives = 131/174 (75%)

Query: 4   PQVFSSQMNQFNWVEASLVRARSSIREAALVRNLTSVHQDPDYVPRGPIYRNANAFHRSY 63
           PQ    +  +   +E  L +AR++IREA   ++      D DYVP GP+YRNA AFHRSY
Sbjct: 201 PQAQRRRDVKLERLELGLAKARATIREAIQNKDNKPPLTDKDYVPVGPVYRNAYAFHRSY 260

Query: 64  LLMEKLFKIYVYEEGEPPMFHDGPCKSIYSTEGRFIHEMERSNTYKTKDPEKALVYFLPF 123
           L MEK+FK++VYEEGEPP+FHDGPC SIYSTEGRFI+ ME  N  +T+DP +A V+FLPF
Sbjct: 261 LEMEKVFKVFVYEEGEPPVFHDGPCHSIYSTEGRFIYAMEMENRMRTRDPNQAHVFFLPF 320

Query: 124 SVVMMVEHLYVPGAHEINAIGHSIVDYISIISHKYPFWNRSLGADHFMLSCHDW 177
           SVV MV+ +Y P +H+++ +  +I DYI+++S KYP WNRSLGADHFMLSCHDW
Sbjct: 321 SVVKMVKMIYEPNSHDMDPLRRTISDYINVVSTKYPHWNRSLGADHFMLSCHDW 374

Source: Oryza sativa Indica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357119191|ref|XP_003561329.1| PREDICTED: probable glycosyltransferase At5g03795-like [Brachypodium distachyon]

 Score =  219 bits (559), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 100/174 (57%), Positives = 129/174 (74%)

Query: 4   PQVFSSQMNQFNWVEASLVRARSSIREAALVRNLTSVHQDPDYVPRGPIYRNANAFHRSY 63
           PQ+   +  + + +E  L +ARS+I EA+  ++      D DYVP GP+YRNANAFHRSY
Sbjct: 171 PQIHRERDAKLHRLELGLAKARSTIMEASHNKDNRPPLTDKDYVPVGPVYRNANAFHRSY 230

Query: 64  LLMEKLFKIYVYEEGEPPMFHDGPCKSIYSTEGRFIHEMERSNTYKTKDPEKALVYFLPF 123
           L MEKLFKIYVY+EGEPP++HDGPC +IYSTEGRFIH ME  N  +T DP  A V+FLPF
Sbjct: 231 LEMEKLFKIYVYDEGEPPIYHDGPCHNIYSTEGRFIHAMEMENRMRTTDPGLAHVFFLPF 290

Query: 124 SVVMMVEHLYVPGAHEINAIGHSIVDYISIISHKYPFWNRSLGADHFMLSCHDW 177
           S+  M + +YVPG+H +  +  ++ DYI ++S K+P+WNRS GADHFMLSCHDW
Sbjct: 291 SIAKMEKTIYVPGSHTMEPLRRTVFDYIDVLSTKHPYWNRSQGADHFMLSCHDW 344

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	182
TAIR|locus:1009023450	518	AT5G03795 [Arabidopsis thalian	0.862	0.303	0.565	1.5e-49
TAIR|locus:2091122	470	AT3G07620 "AT3G07620" [Arabido	0.884	0.342	0.603	7.7e-48
TAIR|locus:2145472	480	AT5G25310 "AT5G25310" [Arabido	0.901	0.341	0.538	4.4e-45
TAIR|locus:2100814	470	AT3G42180 "AT3G42180" [Arabido	0.879	0.340	0.461	6.3e-37
TAIR|locus:2125687	593	AT4G32790 "AT4G32790" [Arabido	0.890	0.273	0.411	9.8e-33
TAIR|locus:2145254	654	AT5G25820 "AT5G25820" [Arabido	0.741	0.206	0.470	2.4e-30
TAIR|locus:2144231	546	AT5G11610 "AT5G11610" [Arabido	0.840	0.280	0.417	3.8e-30
TAIR|locus:2145924	500	XGD1 "AT5G33290" [Arabidopsis	0.818	0.298	0.385	1.2e-29
TAIR|locus:2152632	547	AT5G37000 "AT5G37000" [Arabido	0.873	0.290	0.349	3.6e-23
TAIR|locus:2120933	425	AT4G38040 "AT4G38040" [Arabido	0.653	0.28	0.370	1.8e-18

TAIR|locus:1009023450 AT5G03795 [Arabidopsis thaliana (taxid:3702)]

 Score = 516 (186.7 bits), Expect = 1.5e-49, P = 1.5e-49
 Identities = 91/161 (56%), Positives = 123/161 (76%)

Query:    17 VEASLVRARSSIREAALVRNLTSVHQDPDYVPRGPIYRNANAFHRSYLLMEKLFKIYVYE 76
             +E  L +AR+SI+ A++   +     DPDYVP GP+Y NA  FHRSYL MEK FKIYVY+
Sbjct:   141 IEFKLQKARASIKAASMDDPV----DDPDYVPLGPMYWNAKVFHRSYLEMEKQFKIYVYK 196

Query:    77 EGEPPMFHDGPCKSIYSTEGRFIHEMERSNTYKTKDPEKALVYFLPFSVVMMVEHLYVPG 136
             EGEPP+FHDGPCKSIYS EG FI+E+E    ++T +P+KA V++LPFSVV MV ++Y   
Sbjct:   197 EGEPPLFHDGPCKSIYSMEGSFIYEIETDTRFRTNNPDKAHVFYLPFSVVKMVRYVYERN 256

Query:   137 AHEINAIGHSIVDYISIISHKYPFWNRSLGADHFMLSCHDW 177
             + + + I +++ DYI+++  KYP+WNRS+GADHF+LSCHDW
Sbjct:   257 SRDFSPIRNTVKDYINLVGDKYPYWNRSIGADHFILSCHDW 297

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2091122 AT3G07620 "AT3G07620" [Arabidopsis thaliana (taxid:3702)]

 Score = 500 (181.1 bits), Expect = 7.7e-48, P = 7.7e-48
 Identities = 99/164 (60%), Positives = 116/164 (70%)

Query:    17 VEASLVRARSSIREAALVRNLTSVHQ--DPDYVPRGPIYRNANAFHRSYLLMEKLFKIYV 74
             VEA L  AR  IREA L  + T+     D DYVP G IYRN  AFHRSYLLMEK+FKIYV
Sbjct:    88 VEAELATARVLIREAQLNYSSTTSSPLGDEDYVPHGDIYRNPYAFHRSYLLMEKMFKIYV 147

Query:    75 YEEGEPPMFHDGPCKSIYSTEGRFIHEMERSNT-YKTKDPEKALVYFLPFSVVMMVEHLY 133
             YEEG+PP+FH G CK IYS EG F++ ME     Y+T+DP+KA VYFLPFSVVM++ HL+
Sbjct:   148 YEEGDPPIFHYGLCKDIYSMEGLFLNFMENDVLKYRTRDPDKAHVYFLPFSVVMILHHLF 207

Query:   134 VPGAHEINAIGHSIVDYISIISHKYPFWNRSLGADHFMLSCHDW 177
              P   +   +   I DY+ IIS KYP+WN S G DHFMLSCHDW
Sbjct:   208 DPVVRDKAVLERVIADYVQIISKKYPYWNTSDGFDHFMLSCHDW 251

GO:0003824 "catalytic activity" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2145472 AT5G25310 "AT5G25310" [Arabidopsis thaliana (taxid:3702)]

 Score = 474 (171.9 bits), Expect = 4.4e-45, P = 4.4e-45
 Identities = 91/169 (53%), Positives = 118/169 (69%)

Query:    10 QMNQFNWVEASLVRARSSIREAALVRNLTSVHQDPDYVPRGPIYRNANAFHRSYLLMEKL 69
             ++N+ N VE  L +AR+SI EA+   N T    D   +P   IYRN +A +RSYL MEK 
Sbjct:    94 KLNRRNLVEQGLAKARASILEASSNVNTTLFKSD---LPNSEIYRNPSALYRSYLEMEKR 150

Query:    70 FKIYVYEEGEPPMFHDGPCKSIYSTEGRFIHEMERSNT-YKTKDPEKALVYFLPFSVVMM 128
             FK+YVYEEGEPP+ HDGPCKS+Y+ EGRFI EME+  T ++T DP +A VYFLPFSV  +
Sbjct:   151 FKVYVYEEGEPPLVHDGPCKSVYAVEGRFITEMEKRRTKFRTYDPNQAYVYFLPFSVTWL 210

Query:   129 VEHLYVPGAHEINAIGHSIVDYISIISHKYPFWNRSLGADHFMLSCHDW 177
             V +LY  G  +   +   + DYI ++S  +PFWNR+ GADHFML+CHDW
Sbjct:   211 VRYLY-EGNSDAKPLKTFVSDYIRLVSTNHPFWNRTNGADHFMLTCHDW 258

GO:0003824 "catalytic activity" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2100814 AT3G42180 "AT3G42180" [Arabidopsis thaliana (taxid:3702)]

 Score = 397 (144.8 bits), Expect = 6.3e-37, P = 6.3e-37
 Identities = 78/169 (46%), Positives = 109/169 (64%)

Query:    18 EASLVRARSSIREAALVRNLTSVHQDPDYVPRGPIYRNANAFHRSYLLMEKLFKIYVYEE 77
             E  L +AR++IR A   +N TS  +   Y+P G IYRN+ AFH+S++ M K FK++ Y+E
Sbjct:    82 EEELRKARAAIRRAVRFKNCTSNEEVITYIPTGQIYRNSFAFHQSHIEMMKTFKVWSYKE 141

Query:    78 GEPPMFHDGPCKSIYSTEGRFIHEMER-----SNTYKTKDPEKALVYFLPFSVVMMVEHL 132
             GE P+ HDGP   IY  EG+FI E+       S  ++   PE+A  +FLPFSV  +V ++
Sbjct:   142 GEQPLVHDGPVNDIYGIEGQFIDELSYVMGGPSGRFRASRPEEAHAFFLPFSVANIVHYV 201

Query:   133 YVP--GAHEIN-AIGHSIV-DYISIISHKYPFWNRSLGADHFMLSCHDW 177
             Y P     + N A  H I  DY+ +++HK+PFWN+S GADHFM+SCHDW
Sbjct:   202 YQPITSPADFNRARLHRIFNDYVDVVAHKHPFWNQSNGADHFMVSCHDW 250

GO:0003824 "catalytic activity" evidence=ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA;ISS

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

TAIR|locus:2125687 AT4G32790 "AT4G32790" [Arabidopsis thaliana (taxid:3702)]

 Score = 362 (132.5 bits), Expect = 9.8e-33, P = 9.8e-33
 Identities = 70/170 (41%), Positives = 108/170 (63%)

Query:     8 SSQMNQFNWVEASLVRARSSIREAALVRNLTSVHQDPDYVPRGPIYRNANAFHRSYLLME 67
             S ++ + + ++  L+ AR+ I    L+ N      DP  +   P+Y N + F RSY LME
Sbjct:   213 SLKVKRSSTIDHELLYARTQIENPPLIEN------DP--LLHTPLYWNLSMFKRSYELME 264

Query:    68 KLFKIYVYEEGEPPMFHDGPCKSIYSTEGRFIHEMERSNTYKTKDPEKALVYFLPFSVVM 127
             K  K+YVY EG+ P+ H    K IY++EG F+ +++ S T+ TKDP KA +++LPFS  M
Sbjct:   265 KKLKVYVYREGKRPVLHKPVLKGIYASEGWFMKQLKSSRTFVTKDPRKAHLFYLPFSSKM 324

Query:   128 MVEHLYVPGAHEINAIGHSIVDYISIISHKYPFWNRSLGADHFMLSCHDW 177
             + E LYVPG+H    +   + +Y+ +IS KY FWN++ G+DHF+++CHDW
Sbjct:   325 LEETLYVPGSHSDKNLIQFLKNYLDMISSKYSFWNKTGGSDHFLVACHDW 374

GO:0003824 "catalytic activity" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2145254 AT5G25820 "AT5G25820" [Arabidopsis thaliana (taxid:3702)]

 Score = 342 (125.4 bits), Expect = 2.4e-30, P = 2.4e-30
 Identities = 64/136 (47%), Positives = 88/136 (64%)

Query:    43 DPDYVPRGPIYRNANAFHRSYLLMEKLFKIYVYEEGEPPMFHDGPCKSIYSTEGRFIHEM 102
             D D     P+YRN + F RSY LMEK+ K+Y Y+EG  P+ H    + IY++EG F++ +
Sbjct:   297 DKDPFLYAPLYRNVSMFKRSYELMEKILKVYAYKEGNKPIMHSPILRGIYASEGWFMNII 356

Query:   103 ERSNT-YKTKDPEKALVYFLPFSVVMMVEHLYVPGAHEINAIGHSIVDYISIISHKYPFW 161
             E +N  + TKDP KA +++LPFS  M+   LYV  +H    +   + DYI  IS KYPFW
Sbjct:   357 ESNNNKFVTKDPAKAHLFYLPFSSRMLEVTLYVQDSHSHRNLIKYLKDYIDFISAKYPFW 416

Query:   162 NRSLGADHFMLSCHDW 177
             NR+ GADHF+ +CHDW
Sbjct:   417 NRTSGADHFLAACHDW 432

GO:0003824 "catalytic activity" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

TAIR|locus:2144231 AT5G11610 "AT5G11610" [Arabidopsis thaliana (taxid:3702)]

 Score = 337 (123.7 bits), Expect = 3.8e-30, P = 3.8e-30
 Identities = 68/163 (41%), Positives = 101/163 (61%)

Query:    17 VEASLVRARSSIREAALVRNLTSVHQDPDYVPRGPIYRNANAFHRSYLLMEKLFKIYVYE 76
             V+  L  AR  I++AALV+       D  Y P   +Y N + F RSY LME+  K+YVY 
Sbjct:   175 VDQELKTARDKIKKAALVKK-----DDTLYAP---LYHNISIFKRSYELMEQTLKVYVYS 226

Query:    77 EGEPPMFH--DGPCKSIYSTEGRFIHEMERSNTYKTKDPEKALVYFLPFSVVMMVEHLYV 134
             EG+ P+FH  +   + IY++EG F+  ME S+ + TKDP KA ++++PFS  ++ + LYV
Sbjct:   227 EGDRPIFHQPEAIMEGIYASEGWFMKLMESSHRFLTKDPTKAHLFYIPFSSRILQQKLYV 286

Query:   135 PGAHEINAIGHSIVDYISIISHKYPFWNRSLGADHFMLSCHDW 177
               +H  N +   + +YI +I+  YP WNR+ G+DHF  +CHDW
Sbjct:   287 HDSHSRNNLVKYLGNYIDLIASNYPSWNRTCGSDHFFTACHDW 329

GO:0003824 "catalytic activity" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2145924 XGD1 "AT5G33290" [Arabidopsis thaliana (taxid:3702)]

 Score = 330 (121.2 bits), Expect = 1.2e-29, P = 1.2e-29
 Identities = 66/171 (38%), Positives = 102/171 (59%)

Query:    17 VEASLVRARSSIREAALVRNLTSVHQDPDYVPRGPIYRNANAFHRSYLLMEKLFKIYVYE 76
             +E+ L +AR++I++AA  +N         YV    +Y+N  AFH+S+  M   FK++ Y 
Sbjct:   122 IESDLAKARAAIKKAASTQN---------YV--SSLYKNPAAFHQSHTEMMNRFKVWTYT 170

Query:    77 EGEPPMFHDGPCKSIYSTEGRFIHEM-----ERSNTYKTKDPEKALVYFLPFSVVMMVEH 131
             EGE P+FHDGP   IY  EG+F+ EM     +  + ++   PE A V+F+PFSV  ++  
Sbjct:   171 EGEVPLFHDGPVNDIYGIEGQFMDEMCVDGPKSRSRFRADRPENAHVFFIPFSVAKVIHF 230

Query:   132 LYVPGAHEINAIG----HSIV-DYISIISHKYPFWNRSLGADHFMLSCHDW 177
             +Y P    +        H ++ DY+ +++ K+P+WNRS G DHFM+SCHDW
Sbjct:   231 VYKP-ITSVEGFSRARLHRLIEDYVDVVATKHPYWNRSQGGDHFMVSCHDW 280

GO:0003824 "catalytic activity" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=ISM;IDA

GO:0016020 "membrane" evidence=IEA;ISS

GO:0010398 "xylogalacturonan metabolic process" evidence=IMP

GO:0035252 "UDP-xylosyltransferase activity" evidence=IDA

GO:0045489 "pectin biosynthetic process" evidence=IMP

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

TAIR|locus:2152632 AT5G37000 "AT5G37000" [Arabidopsis thaliana (taxid:3702)]

 Score = 274 (101.5 bits), Expect = 3.6e-23, P = 3.6e-23
 Identities = 58/166 (34%), Positives = 98/166 (59%)

Query:    18 EASLVRARSSIREAALVRNLTS----VHQD-PDYVPRGPIYR-NANAFHRSYLLMEKLFK 71
             ++ ++ ARS I + +LV +       V+++   ++  G + R +     RSY LME+  K
Sbjct:   182 DSEMLSARSEIEKVSLVHDFLGLNPLVYRNISKFLRSGDMSRFSMCCLFRSYDLMERKLK 241

Query:    72 IYVYEEGEPPMFHDGPCKSIYSTEGRFIHEMERSNTYKTKDPEKALVYFLPFSVVMMVEH 131
             IYVY+EG  P+FH    + IY++EG F+  ME +  +  KDP KA ++++P S+  +   
Sbjct:   242 IYVYKEGGKPIFHTPMPRGIYASEGWFMKLMESNKKFVVKDPRKAHLFYIPISIKALRSS 301

Query:   132 LYVPGAHEINAIGHSIVDYISIISHKYPFWNRSLGADHFMLSCHDW 177
             L +      +   H + +Y+ +I+ KY FWNR+ GADHF+++CHDW
Sbjct:   302 LGLDFQTPKSLADH-LKEYVDLIAGKYKFWNRTGGADHFLVACHDW 346

GO:0003824 "catalytic activity" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA;ISS

TAIR|locus:2120933 AT4G38040 "AT4G38040" [Arabidopsis thaliana (taxid:3702)]

 Score = 228 (85.3 bits), Expect = 1.8e-18, P = 1.8e-18
 Identities = 47/127 (37%), Positives = 75/127 (59%)

Query:    52 IYRNANAFHRSYLLMEKLFKIYVYEEGEPPMFHDGPCKSI--YSTEGRFIHEMERSNTYK 109
             +Y +  AF  +Y  MEK FK+Y+Y +G+P  F+  P K    Y++EG F   + R + ++
Sbjct:    86 VYHSPEAFRLNYAEMEKRFKVYIYPDGDPNTFYQTPRKVTGKYASEGYFFQNI-RESRFR 144

Query:   110 TKDPEKALVYFLPFSVVMMVEHLYVPGAHEINAIGHSIVDYISIISHKYPFWNRSLGADH 169
             T DP++A ++F+P S   M       G    N +   + +Y+  +  KYP+WNR+LGADH
Sbjct:   145 TLDPDEADLFFIPISCHKMRGK----GTSYEN-MTVIVQNYVDGLIAKYPYWNRTLGADH 199

Query:   170 FMLSCHD 176
             F ++CHD
Sbjct:   200 FFVTCHD 206

GO:0003824 "catalytic activity" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=ISM;IDA

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA;ISS

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	182
pfam03016	292	pfam03016, Exostosin, Exostosin family	3e-12

>gnl|CDD|217320 pfam03016, Exostosin, Exostosin family

 Score = 63.2 bits (154), Expect = 3e-12
 Identities = 27/123 (21%), Positives = 47/123 (38%), Gaps = 16/123 (13%)

Query: 66  MEKLFKIYVYE-------EGEPPMFHDGPCKSIYSTEGRFIHEMERSNTYKTKDPEKALV 118
             K  K+YVY+         +            Y+ E      +  S   +T DP++A +
Sbjct: 1   SCKGLKVYVYDLPRRFNLLEDVLPETSWYLTHQYAAESILHKSILNS-RCRTLDPDEADL 59

Query: 119 YFLPFSVVMMVEHLYVPGAHEINAIGHSIVDYISIISHKYPFWNRSLGADHFMLSCHDWV 178
           +F+PF        L V        +  S +          P+WNRS G DH +++ H + 
Sbjct: 60  FFVPFYTS-----LSVGTNAVERDLLPSELVEWL---ESLPYWNRSGGRDHIIVNSHPFG 111

Query: 179 RNS 181
            ++
Sbjct: 112 GSA 114

The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. Length = 292

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	182
KOG1021	464	consensus Acetylglucosaminyltransferase EXT1/exost	99.96
PF03016	302	Exostosin: Exostosin family; InterPro: IPR004263 H	99.93
KOG2264	907	consensus Exostosin EXT1L [Signal transduction mec	90.79
PF00919	98	UPF0004: Uncharacterized protein family UPF0004; I	83.77

>KOG1021 consensus Acetylglucosaminyltransferase EXT1/exostosin 1 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures]

Probab=99.96  E-value=2.3e-29  Score=230.81  Aligned_cols=130  Identities=36%  Similarity=0.647  Sum_probs=117.5

Q ss_pred             cccChhhhhhchHhhhcCceEEEecCCCCCCCCCC--CCCCchhhHHHHHHHHh-hCCCcccCCcCCcceEEEceeeeee
Q 039479           52 IYRNANAFHRSYLLMEKLFKIYVYEEGEPPMFHDG--PCKSIYSTEGRFIHEME-RSNTYKTKDPEKALVYFLPFSVVMM  128 (182)
Q Consensus        52 ~y~n~~~f~~sy~~m~~~lKIYVY~lg~pp~~h~~--~~~~~Ya~E~~F~~~Ll-~~s~~rT~DP~eAdlFfvPf~~~~~  128 (182)
                      ++++...|..+|..|++.+|||+|.+|+++.+|.+  .+++||++|++||++|+ ..++|||.||++||+||||||+++.
T Consensus        97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~E~~~~~~~~~~~~~~Rt~dp~~Ad~f~vPf~~~~~  176 (464)
T KOG1021|consen   97 TSPNNKKFMCSYKLNEKRGKVYVYHEGNKPLFHTPSWCLTDQYASEGIFHNRMLRRESAFRTLDPLEADAFYVPFYASLD  176 (464)
T ss_pred             ccCcchhhhhhhhhhcccCceEEecCCCCccccCCCcccccchhHHHHHHHHHhcccCceecCChhhCcEEEEcceeeEe
Confidence            58999999999999999999999999988999987  78999999999999997 3368999999999999999999998


Q ss_pred             e-eccccCCCCchhHHHHHHHHHHHHHHhcCchhhcCCCCCeEEEcCCCCCCCC
Q 039479          129 V-EHLYVPGAHEINAIGHSIVDYISIISHKYPFWNRSLGADHFMLSCHDWVRNS  181 (182)
Q Consensus       129 ~-~~ly~p~~~~~~~l~~~l~dyv~~I~~kyPyWnRs~GaDHf~v~cHD~g~~~  181 (182)
                      + ++++.++......+...+.+||..+.++||||||++|+|||||+|||||+..
T Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~W~Rs~G~DH~~v~~~~~~~~~  230 (464)
T KOG1021|consen  177 YNRALLWPDERVNAILRSILQDYIVALLSKQPYWNRSSGRDHFFVACHDWGDFR  230 (464)
T ss_pred             hhhhcccCCcccchHHHHHHHHHHHHHHhcCchhhccCCCceEEEeCCcchhee
Confidence            7 6667776544556778899999999999999999999999999999999753

>PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses []

Probab=99.93  E-value=4.1e-26  Score=193.12  Aligned_cols=110  Identities=33%  Similarity=0.589  Sum_probs=87.6

Q ss_pred             hcCceEEEecCCCCCCCCCCC------------CCCchhhHHHHHHHHhhCCCcccCCcCCcceEEEceeeeeeeecccc
Q 039479           67 EKLFKIYVYEEGEPPMFHDGP------------CKSIYSTEGRFIHEMERSNTYKTKDPEKALVYFLPFSVVMMVEHLYV  134 (182)
Q Consensus        67 ~~~lKIYVY~lg~pp~~h~~~------------~~~~Ya~E~~F~~~Ll~~s~~rT~DP~eAdlFfvPf~~~~~~~~ly~  134 (182)
                      .++||||||++  ||.|+...            ..++|++|.+|++.|+. +++||.||+|||+||||+++++...... 
T Consensus         2 ~~~lkVYVY~l--p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~~l~~-s~~~T~dp~eAdlF~vP~~~~~~~~~~~-   77 (302)
T PF03016_consen    2 HRGLKVYVYPL--PPKFNKDLLDPREDEQCSWYETSQYALEVILHEALLN-SPFRTDDPEEADLFFVPFYSSCYFHHWW-   77 (302)
T ss_pred             CCCCEEEEEeC--CccccccceeccccccCCCcccccchHHHHHHHHHHh-CCcEeCCHHHCeEEEEEccccccccccc-
Confidence            47899999999  77776222            35799999999999996 7899999999999999999999751111 


Q ss_pred             CCCCchhHHHHHHHHHHHHHHhcCchhhcCCCCCeEEEcCCCCCCCC
Q 039479          135 PGAHEINAIGHSIVDYISIISHKYPFWNRSLGADHFMLSCHDWVRNS  181 (182)
Q Consensus       135 p~~~~~~~l~~~l~dyv~~I~~kyPyWnRs~GaDHf~v~cHD~g~~~  181 (182)
                       ...........+.+++..+.+++|||||++|+||||+.+||||.+.
T Consensus        78 -~~~~~~~~~~~~~~~~~~~~~~~p~w~r~~G~dH~~~~~~~~g~~~  123 (302)
T PF03016_consen   78 -GSPNSGADRDSLSDALRHLLASYPYWNRSGGRDHFFVNSHDRGGCS  123 (302)
T ss_pred             -CCccchhhHHHHHHHHHHHHhcCchhhccCCCCeEEEecccccccc
Confidence             1112223455667778888899999999999999999999988753

Mutations in two homologous genes, EXT1 and EXT2, are responsible for the EXT syndrome. The human and mouse EXT genes have at least two homologs in the invertebrate Caenorhabditis elegans, indicating that they do not function exclusively as regulators of bone growth. EXT1 and EXT2 have both been shown to encode glycosyltransferases involved in the chain elongation step of heparan sulphate biosynthesis [].; GO: 0016020 membrane

>KOG2264 consensus Exostosin EXT1L [Signal transduction mechanisms]

Probab=90.79  E-value=3.6  Score=40.25  Aligned_cols=140  Identities=16%  Similarity=0.297  Sum_probs=74.4

Q ss_pred             hccchhhhhHHHHHHHHHHHHHhhhhccCc-----c---CCCCCCC----CCCCCcccChhhhhhchHhhhcCceEEEec
Q 039479            9 SQMNQFNWVEASLVRARSSIREAALVRNLT-----S---VHQDPDY----VPRGPIYRNANAFHRSYLLMEKLFKIYVYE   76 (182)
Q Consensus         9 ~~~~~~~~~~~~l~~ar~~i~~a~~~~~~~-----~---~~~~~~~----~~~~~~y~n~~~f~~sy~~m~~~lKIYVY~   76 (182)
                      .+...|++++-+..+|+.+.+++....+-.     +   .+....-    .-.++--||---++|  -.....|-||||+
T Consensus       125 ~~q~eL~~Lk~~ieqaq~~~~El~~~n~pkl~LP~sllP~~~pr~l~pp~~~~~c~lhncfdySR--CsltSgfPVYvyd  202 (907)
T KOG2264|consen  125 QKQLELSALKGEIEQAQRQLEELRETNNPKLFLPFSLLPLQIPRELEPPSQISPCQLHNCFDYSR--CSLTSGFPVYVYD  202 (907)
T ss_pred             HhHHHHHHHHhHHHHHHHHHHHHHhhcCCceeeccccCcccCcccCCCccccCcccchhcccccc--ccccCCceeEEec
Confidence            445567778888888888888886532210     1   1000000    112333444433332  1234668999999


Q ss_pred             CCCCCCCCCCCCCCchhhHHHHHHHHhh---CCCcccCCcCCcceEEEceeeeeeeeccccCCCCchhHHHHHHHHHHHH
Q 039479           77 EGEPPMFHDGPCKSIYSTEGRFIHEMER---SNTYKTKDPEKALVYFLPFSVVMMVEHLYVPGAHEINAIGHSIVDYISI  153 (182)
Q Consensus        77 lg~pp~~h~~~~~~~Ya~E~~F~~~Ll~---~s~~rT~DP~eAdlFfvPf~~~~~~~~ly~p~~~~~~~l~~~l~dyv~~  153 (182)
                      -   .++..    | +...+|.-+-+..   ...+.|+||+.|=++.+=.      .-+-.|....+..+..+.      
T Consensus       203 ~---D~~~~----G-~~~d~~lk~~fq~t~~~n~~~ve~pd~ACiyi~lv------ge~q~P~~l~p~elekly------  262 (907)
T KOG2264|consen  203 S---DIITS----G-QSEDEWLKQVFQETIPNNVYLVETPDKACIYIHLV------GEIQSPVVLTPAELEKLY------  262 (907)
T ss_pred             c---ceeec----c-cchHHHHHHHHHHhcccceeEeeCCCccEEEEEEe------ccccCCCcCChHhhhhhh------
Confidence            6   32322    2 2333343323321   2468999999997765421      112234333333433321      


Q ss_pred             HHhcCchhhcCCCCCeEEEcC
Q 039479          154 ISHKYPFWNRSLGADHFMLSC  174 (182)
Q Consensus       154 I~~kyPyWnRs~GaDHf~v~c  174 (182)
                         .-|+| |+.|++|+++.-
T Consensus       263 ---slp~w-~~dg~Nhvl~Nl  279 (907)
T KOG2264|consen  263 ---SLPHW-RTDGFNHVLFNL  279 (907)
T ss_pred             ---cCccc-cCCCcceEEEEc
Confidence               35999 689999999754

>PF00919 UPF0004: Uncharacterized protein family UPF0004; InterPro: IPR013848 The methylthiotransferase (MTTase) or miaB-like family is named after the (dimethylallyl)adenosine tRNA MTTase miaB protein, which catalyses a C-H to C-S bond conversion in the methylthiolation of tRNA

Probab=83.77  E-value=1.9  Score=32.02  Aligned_cols=43  Identities=26%  Similarity=0.359  Sum_probs=28.4

Q ss_pred             eEEEecCCCCCCCCCCCCCCchhhHHHHHHHHhhCCCcccCCcCCcceEEEc
Q 039479           71 KIYVYEEGEPPMFHDGPCKSIYSTEGRFIHEMERSNTYKTKDPEKALVYFLP  122 (182)
Q Consensus        71 KIYVY~lg~pp~~h~~~~~~~Ya~E~~F~~~Ll~~s~~rT~DP~eAdlFfvP  122 (182)
                      |||+.-+|=        -.+++-+| .+...|....--.|.+|++||++.|=
T Consensus         1 Kv~i~T~GC--------~~N~~Dse-~i~~~l~~~G~~~~~~~e~AD~iiiN   43 (98)
T PF00919_consen    1 KVYIETLGC--------QMNQYDSE-RIASILQAAGYEIVDDPEEADVIIIN   43 (98)
T ss_pred             CEEEEECCC--------cccHHHHH-HHHHHHHhcCCeeecccccCCEEEEE
Confidence            456666542        12678788 44555654334689999999999663

A related bacterial enzyme rimO performs a similar methylthiolation, but on a protein substrate. RimO acts on the ribosomal protein S12 and forms a separate MTTase subfamily. The miaB-subfamily includes mammalian CDK5 regulatory subunit-associated proteins and similar proteins in other eukaryotes. Two other subfamilies, yqeV and CDKAL1, are named after a Bacillus subtilis and a human protein, respectively. While yqeV-like proteins are found in bacteria, CDKAL1 subfamily members occur in eukaryotes and in archaebacteria. The likely MTTases from these 4 subfamilies contain an N-terminal MTTase domain, a central radical generating fold and a C-terminal TRAM domain (see PDOC50926 from PROSITEDOC). The core forms a radical SAM fold (or AdoMet radical), containing a cysteine motif CxxxCxxC that binds a [4Fe-4S] cluster [, , ]. A reducing equivalent from the [4Fe-4S]+ cluster is used to cleave S-adenosylmethionine (SAM) to generate methionine and a 5'-deoxyadenosyl radical. The latter is thought to produce a reactive substrate radical that is amenable to sulphur insertion [, ]. The N-terminal MTTase domain contains 3 cysteines that bind a second [4Fe-4S] cluster, in addition to the radical-generating [4Fe-4S] cluster, which could be involved in the thiolation reaction. The C-terminal TRAM domain is not shared with other radical SAM proteins outside the MTTase family. The TRAM domain can bind to RNA substrate and seems to be important for substrate recognition. The tertiary structure of the central radical SAM fold has six beta/alpha motifs resembling a three-quarter TIM barrel core (see PDOC00155 from PROSITEDOC) []. The N-terminal MTTase domain might form an additional [beta/alpha]2 TIM barrel unit []. ; GO: 0003824 catalytic activity, 0051539 4 iron, 4 sulfur cluster binding, 0009451 RNA modification

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00