Citrus Sinensis ID: 039555

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210----
Protein Sequence
MFVFLKSLSRSVHQEEPEPALIKKNIDEGECTSLTVWRKSLVICCNGFTVIDSHGNLVYRVDNYVGSCHELILMDGSGKSIFTMRRRKKLTVADSWRVFEGEVDECSRRKKLSKRPVCYVKKHMMSINSNVLAYVYYGGASSNKRYAYTVEGSYANRSCKVLDESRRVVAEIKRKKAAIGGVSFGVEVFLLIVHPSFDAAFAMALVLLLDQMFS
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccEEEEEEEEEEEEEcccEEEEEccccEEEEEEcccccccEEEEEcccccEEEEEEEccccccccEEEEEEcccccHHHHHccccccEEEEEccEEcccccEEEEEEEccccccccEEEEEEEEcccccEEEEcccccEEEEEEEEEEEcccEEEEEEEEEEEEEccccHHHHHHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
cccccccHcccccccccccccccccccccccEEEEEEEEEEEEccccEEEEEccccEEEEEccccccccEEEEEcccccEEEEEEEccEccccccEEEEEccccccccccccccccEEEEEEEcEEEcccEEEEEEEcccccccccEEEEEcccccccEEEEcccccEEEEEEEEEccccEEEEcccEEEEEEccccHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
MFVFLKSLSrsvhqeepepalikknidegectslTVWRKSLVICCNgftvidshgnlvyrvdnyvgsCHELILMDGSGKSIFTMRRRKKLTVADSWRVFEGevdecsrrkklskrpvcyVKKHMMSINSNVLAYVYYggassnkryAYTVegsyanrsckvlDESRRVVAEIKRKKAAIGGVSFGVEVFLLIVHPSFDAAFAMALVLLLDQMFS
Flexible Loop (DISEMBL)
mfvflkslsrsvhqeepepalikknidegECTSLTVWRKSLVICCNGFTVIDSHGNLVYRVDNYVGSCHELILMdgsgksifTMRRRKkltvadswrvfegevdecsrrkklskrpvcyvkkhmMSINSNVLAYVYYGGASSNKRYAYTVEGsyanrsckvldeSRRVVAEIKrkkaaiggvsFGVEVFLLIVHPSFDAAFAMALVLLLDQMFS
Low Complexity Region (SEG)
MFVFLKSLSRSVHQEEPEPALIKKNIDEGECTSLTVWRKSLVICCNGFTVIDSHGNLVYRVDNYVGSCHELILMDGSGKSIFTMRRRKKLTVADSWRVFEGEVDECSRRKKLSKRPVCYVKKHMMSINSNVLAYVYYGGASSNKRYAYTVEGSYANRSCKVLDESRRVVAEIKRKKAAIGGVSFGVEVFLLIVHPSFDAAFAMALVLLLDQMFS
Disordered region (IsUnstruct)
*********************IKKNIDEGECTSLTVWRKSLVICCNGFTVIDSHGNLVYRVDNYVGSCHELILMDGSGKSIFTMRRRKKLTVADSWRVFEGEVDECSRRKKLSKRPVCYVKKHMMSINSNVLAYVYYGGASSNKRYAYTVEGSYANRSCKVLDESRRVVAEIKRKKAAIGGVSFGVEVFLLIVHPSFDAAFAMALVLLLD****
Disordered Region (DISOPRED)
*********************IKKNIDEGECTSLTVWRKSLVICCNGFTVIDSHGNLVYRVDNYVGSCHELILMDGSGKSIFTMRRRKKLTVADSWRVFEGEVDEC*********************NSNVLAYVYYGGASSNKRYAYTVEGSYANRSCKVLDESRRVVAEIKRKKAAIGGVSFGVEVFLLIVHPSFDAAFAMALVLLLDQMFS
Disordered Region (DISEMBL)
MFVFLKSLS********EPALIKKNIDEGECTSLTVWRKSLVICCNGFTVIDSHGNLVYRVDNYVGSCHELILMDGSGKSIFTMRRRKKLTVADSWRVFEGEVDECSRRKKLSKRPVCYVKKHMMSINSNVLAYVYYGGASSNKRYAYTVEGSYANRSCKVLDESRRVVAEIKRKKAAIGGVSFGVEVFLLIVHPSFDAAFAMALVLLLDQMFS
Disordered Region (DISPRO)
*****KS*S*******PEPALIKKNIDEGECTSLTVWRKSLVICCNGFTVIDSHGNLVYRVDNYVGSCHELILMDGSGKSIFTMRRRKKLTVADSWRVFEGEVDECS****LSKRPVCYVKKHMMSINSNVLAYVYYGGASSNKRYAYTVEGSYANRSCKVLDESRRVVAEIKRKKAAIGGVSFGVEVFLLIVHPSFDAAFAMALVLLLDQMFS
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MFVFLKSLSRSVHQEEPEPALIKKNIDEGECTSLTVWRKSLVICCNGFTVIDSHGNLVYRVDNYVGSCHELILMDGSGKSIFTMRRRKKLTVADSWRVFEGEVDECSRRKKLSKRPVCYVKKHMMSINSNVLAYVYYGGASSNKRYAYTVEGSYANRSCKVLDESRRVVAEIKRKKAAIGGVSFGVEVFLLIVHPSFDAAFAMALVLLLDQMFS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	214	2.2.26 [Sep-21-2011]
A0MFL4	221	Protein LURP-one-related	yes	no	0.976	0.945	0.477	1e-49
Q9ZVI6	196	Protein LURP-one-related	no	no	0.803	0.877	0.434	3e-35
Q9SSC7	210	Protein LURP-one-related	no	no	0.850	0.866	0.376	4e-24
Q9LVZ8	220	Protein LURP-one-related	no	no	0.794	0.772	0.349	3e-23
Q9LUM1	230	Protein LURP-one-related	no	no	0.789	0.734	0.353	4e-18
Q9LZX1	217	Protein LURP-one-related	no	no	0.869	0.857	0.292	3e-15
Q67XV7	217	Protein LURP-one-related	no	no	0.771	0.760	0.313	3e-15
Q8LG32	217	Protein LURP-one-related	no	no	0.771	0.760	0.313	3e-15
Q9LQ36	224	Protein LURP-one-related	no	no	0.766	0.732	0.302	3e-13
Q9SH27	215	Protein LURP-one-related	no	no	0.738	0.734	0.288	8e-13

>sp|A0MFL4|LOR17_ARATH Protein LURP-one-related 17 OS=Arabidopsis thaliana GN=At5g41590 PE=2 SV=2

 Score =  196 bits (497), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 108/226 (47%), Positives = 147/226 (65%), Gaps = 17/226 (7%)

Query: 1   MFVFLKSLSRSVHQEEPEPALIKKNID------EGECTSLTVWRKSLVICCNGFTVIDSH 54
           MF FLK  SRSVH E+  P+  +  +        G CT+LTVWRKSL++ C GFTVIDS+
Sbjct: 1   MFPFLKQRSRSVHGED-APSSTESTVSVAAADIGGACTTLTVWRKSLLVSCEGFTVIDSN 59

Query: 55  GNLVYRVDNYVGS-CHELILMDGSGKSIFTMRRRKKLTVADSWRVFEGEVDECSRRKKLS 113
           G+L+YRVDNY  +   ELILMD  G S+  M R KK+T+ DSW ++E   ++     K+ 
Sbjct: 60  GDLIYRVDNYARTRPEELILMDKDGNSLLLMHRTKKITLVDSWGIYEA--NDTKGETKIP 117

Query: 114 KRPVCYVKKHM----MSINSNVLAYVYYGGASSNKRYAYTVEGSYANRSCKVLDES-RRV 168
           K P  Y++K++    +S  S++LAYVY G  S +K+ +Y ++GSY  +SCK++     + 
Sbjct: 118 KCPTWYMRKNLKMNILSTKSDILAYVYSG--SFDKKNSYIIKGSYRCKSCKIVHVPLNKT 175

Query: 169 VAEIKRKKAAIGGVSFGVEVFLLIVHPSFDAAFAMALVLLLDQMFS 214
           V EIKRK+    GV FG +VF L+V+P FD   AMALVLLLDQMFS
Sbjct: 176 VVEIKRKEVRTKGVRFGSDVFDLVVNPGFDTGLAMALVLLLDQMFS 221

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9ZVI6|LOR8_ARATH Protein LURP-one-related 8 OS=Arabidopsis thaliana GN=At2g38640 PE=2 SV=1

 Score =  148 bits (373), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 83/191 (43%), Positives = 119/191 (62%), Gaps = 19/191 (9%)

Query: 27  DEGECTSLTVWRKSLVICCNGFTVIDSHGNLVYRVDNYVGSCHE-LILMDGSGKSIFTMR 85
           D      LTVW+KSL+  C+GFTV +++G LV+RVDNY+    + ++LMD SG  + ++ 
Sbjct: 18  DSKAAVVLTVWKKSLLFNCDGFTVYNANGELVFRVDNYMNCPRDNIVLMDASGFPLLSI- 76

Query: 86  RRKKLTVADSWRVFEGEVDECSRRKKLSKRPVCYVKKHMMSI-NSNVLAYVYYGGASSNK 144
           RRKKL++ D W V++GE +         + P+   +K++  I N   LA+V     S+ K
Sbjct: 77  RRKKLSLGDCWMVYDGETE---------RDPIFTARKNVSIISNRKSLAWV-----SAKK 122

Query: 145 RYAYTVEGSYANRSCKVLDESR--RVVAEIKRKKAAIGGVSFGVEVFLLIVHPSFDAAFA 202
              Y +EGSY  RSCK+LDE R  +  AEIKRK+  IGGV+FG +V+ LIV    +   A
Sbjct: 123 TVLYEIEGSYGQRSCKILDERRNKKKTAEIKRKETVIGGVAFGKDVYKLIVESEMEPRVA 182

Query: 203 MALVLLLDQMF 213
           MAL ++LDQMF
Sbjct: 183 MALTIILDQMF 193

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SSC7|LOR5_ARATH Protein LURP-one-related 5 OS=Arabidopsis thaliana GN=At1g80120 PE=1 SV=1

 Score =  111 bits (277), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 75/199 (37%), Positives = 110/199 (55%), Gaps = 17/199 (8%)

Query: 21  LIKKNIDEGECTSLTVWRKSLVICCNGFTVIDSHGNLVYRVDNYVG----SCHELILMDG 76
           L+      GE  SLTV + SL    +GFTV D  G+LV+RVD+Y G       E++LMD 
Sbjct: 6   LVDDEFIHGEERSLTVRKTSLFFAGDGFTVYDCKGSLVFRVDSYGGPNTRDTDEVVLMDA 65

Query: 77  SGKSIFTMRRRKKLTVADSWRVFEGEVDECSRRKKLSKRPVCYVKKHMMSINSNVLAYVY 136
            G+ + T+RR++       W  + GE       +   ++P+  V++  + I  N +    
Sbjct: 66  HGRCLLTLRRKRPSLRR-RWEGYLGE-------RSDGQKPIFGVRRSSI-IGRNSVTVEV 116

Query: 137 YGGASSNKRYAYTVEGSYANRSCKVLD-ESRRVVAEIKRKKAAIGGVSFGVEVFLLIVHP 195
           YG    ++   Y +EGS+  R+C V++ E+RR VAEI+RK  A   V  G +VF L V P
Sbjct: 117 YGDYQCSE---YLIEGSFGARNCTVVEAETRRKVAEIRRKVDASTNVMLGKDVFSLNVKP 173

Query: 196 SFDAAFAMALVLLLDQMFS 214
            FD AFAM LVL+LDQ++ 
Sbjct: 174 GFDGAFAMGLVLVLDQIYG 192

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LVZ8|LOR12_ARATH Protein LURP-one-related 12 OS=Arabidopsis thaliana GN=At3g15810 PE=2 SV=1

 Score =  108 bits (269), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 65/186 (34%), Positives = 98/186 (52%), Gaps = 16/186 (8%)

Query: 30  ECTSLTVWRKSLVICCNGFTVIDSHGNLVYRVDNYVGSCH---ELILMDGSGKSIFTMRR 86
           E   LTV + SL    +GF   D  G++++RVD+Y        E++LMD +GK + T++R
Sbjct: 29  EDKPLTVCKTSLFYTGDGFAAYDCRGDIIFRVDSYGPDTRDNDEIVLMDATGKCLLTVKR 88

Query: 87  RKKLTVADSWRVFEGEVDECSRRKKLSKRPVCYVKKHMMSINSNVLAYVYYGGASSNKRY 146
            K+ T+   W  F GE  E        ++P+  V++  +     +   VY G        
Sbjct: 89  -KRPTLHQRWEGFLGERSE-------GQKPIFSVRRSSIIGRCTMEVEVYDGTGEE---- 136

Query: 147 AYTVEGSYANRSCKVLDESRRVVAEIKRKKAAIGGVSFGVEVFLLIVHPSFDAAFAMALV 206
            Y ++G ++ RSC + D  +  VAEIKRK  A   V  G +VF L + P FD AFAM LV
Sbjct: 137 -YIIDGDFSQRSCLIYDTKKCTVAEIKRKVDASTNVMLGRDVFTLEIKPGFDGAFAMGLV 195

Query: 207 LLLDQM 212
           ++LDQ+
Sbjct: 196 VVLDQI 201

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LUM1|LOR11_ARATH Protein LURP-one-related 11 OS=Arabidopsis thaliana GN=At3g14260 PE=2 SV=1

 Score = 91.7 bits (226), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 65/184 (35%), Positives = 99/184 (53%), Gaps = 15/184 (8%)

Query: 30  ECTSLTVWRKSLVICCNGFTVIDSHGNLVYRVDNYVG-SCHELILMDGSGKSIFTMRRRK 88
           E  S T+W KSLV   NG TV DS GN++YRVDNY   SC E+ LMD SG  +FT+ RR+
Sbjct: 47  EQESFTIWMKSLVFNTNGCTVFDSKGNIIYRVDNYNSKSCREVYLMDLSGHVLFTL-RRQ 105

Query: 89  KLTVADSWRVFEGEVDECSRRKKLSKRPVCYVKKHMMSI---NSNVLAYVYYGGASSNKR 145
           K  +  +W   EG     +  +  +K     VK ++  +   +S+    V  G   ++++
Sbjct: 106 KFGLFKTW---EGYRSSSATVESTTKLEYFRVKNNVFQVPNKDSSSSYRVNAGSCRNDEQ 162

Query: 146 YAY--TVEGSYANRSCKVLDESRRVVAEIKRKKAAIGGVSFGVEVFLLIVHPSFDAAFAM 203
           Y Y     GS    S  + D   +++AE+KRK+ +I G+  G +V  ++V    D +F +
Sbjct: 163 YCYKMVTRGS----SLAIEDNCGKLLAEVKRKQ-SINGLKLGDDVLTMMVESQVDHSFII 217

Query: 204 ALVL 207
            LVL
Sbjct: 218 GLVL 221

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LZX1|LOR15_ARATH Protein LURP-one-related 15 OS=Arabidopsis thaliana GN=At5g01750 PE=1 SV=1

 Score = 82.0 bits (201), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 97/202 (48%), Gaps = 16/202 (7%)

Query: 17  PEPALIKKNIDEGECTS----LTVWRKSLVICCNGFTVIDSHGNLVYRVDNYVGSCHE-L 71
           P P      +D   C      + + RK + +    F + D +GNL+++V   V   H+  
Sbjct: 19  PTPQAGGVVVDPKYCAPYPIDMAIVRKMMSLTDGNFVITDVNGNLLFKVKEPVFGLHDKR 78

Query: 72  ILMDGSGKSIFTMRRRKKLTVADSWRVFEGEVDECSRRKKLSKRPVCYVKKHMMSINSNV 131
           +L+DGSG  + T+R  K +++ D W+VF G            +R + Y  K    +    
Sbjct: 79  VLLDGSGTPVVTLRE-KMVSMHDRWQVFRG--------GSTDQRDLLYTVKRSSMLQLKT 129

Query: 132 LAYVYYGGASSNKRYAYTVEGSYANRSCKVL-DESRRVVAEIKRKKAAIGGVSFGVEVFL 190
              V+ G     KR  + V+GS+  RSC V   ES  +VA++ RK   +  V  G + F 
Sbjct: 130 KLDVFLGHNKDEKRCDFRVKGSWLERSCVVYAGESDAIVAQMHRKH-TVQSVFLGKDNFS 188

Query: 191 LIVHPSFDAAFAMALVLLLDQM 212
           + V+P+ D AF  +LV++LD +
Sbjct: 189 VTVYPNVDYAFIASLVVILDDV 210

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

Arabidopsis thaliana (taxid: 3702)

>sp|Q67XV7|LOR3_ARATH Protein LURP-one-related 3 OS=Arabidopsis thaliana GN=At1g53890 PE=2 SV=2

 Score = 81.6 bits (200), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 57/182 (31%), Positives = 87/182 (47%), Gaps = 17/182 (9%)

Query: 30  ECTSLTVWRKSLVICCNGFTVIDSHGNLVYRVDNYVGS--CHELILMDGSGKSIFTMRRR 87
           E    T+W KSLV    G TV DS GNL+YRVDNY      +E+  MD +GK +FT+ R+
Sbjct: 40  EQERFTIWMKSLVFNSKGCTVFDSKGNLIYRVDNYDSKSWSNEVYFMDLNGKILFTL-RQ 98

Query: 88  KKLTVADSWRVFEGEVDECSRRKKLSKRPVCYVKKHMMSINSNVLAYVYYGGASSNKRYA 147
           KKL    SW  +         RK     P      + + + S ++          +++  
Sbjct: 99  KKLGFFKSWEGYNSTGTRFRLRKIFKILPRESSSSYKVVMGSRIV--------DGDQQSC 150

Query: 148 YTVEGSYANRSC--KVLDESRRVVAEIKRKKAAIGGVSFGVEVFLLIVHPSFDAAFAMAL 205
           Y +     NR     + D S R++AE+K K + I G+  G +V  ++V P  D +  M +
Sbjct: 151 YKI----VNRGSVFAIKDGSGRLMAEVKNKLSDISGLDLGDDVLTMMVEPQLDHSLIMGI 206

Query: 206 VL 207
           V+
Sbjct: 207 VI 208

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8LG32|LOR2_ARATH Protein LURP-one-related 2 OS=Arabidopsis thaliana GN=At1g53870 PE=2 SV=2

 Score = 81.6 bits (200), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 57/182 (31%), Positives = 87/182 (47%), Gaps = 17/182 (9%)

Query: 30  ECTSLTVWRKSLVICCNGFTVIDSHGNLVYRVDNYVGS--CHELILMDGSGKSIFTMRRR 87
           E    T+W KSLV    G TV DS GNL+YRVDNY      +E+  MD +GK +FT+ R+
Sbjct: 40  EQERFTIWMKSLVFNSKGCTVFDSKGNLIYRVDNYDSKSWSNEVYFMDLNGKILFTL-RQ 98

Query: 88  KKLTVADSWRVFEGEVDECSRRKKLSKRPVCYVKKHMMSINSNVLAYVYYGGASSNKRYA 147
           KKL    SW  +         RK     P      + + + S ++          +++  
Sbjct: 99  KKLGFFKSWEGYNSTGTRFRLRKIFKILPRESSSSYKVVMGSRIV--------DGDQQSC 150

Query: 148 YTVEGSYANRSC--KVLDESRRVVAEIKRKKAAIGGVSFGVEVFLLIVHPSFDAAFAMAL 205
           Y +     NR     + D S R++AE+K K + I G+  G +V  ++V P  D +  M +
Sbjct: 151 YKI----VNRGSVFAIKDGSGRLMAEVKNKLSDISGLDLGDDVLTMMVEPQLDHSLIMGI 206

Query: 206 VL 207
           V+
Sbjct: 207 VI 208

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LQ36|LOR1_ARATH Protein LURP-one-related 1 OS=Arabidopsis thaliana GN=At1g33840 PE=2 SV=2

 Score = 75.1 bits (183), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 55/182 (30%), Positives = 88/182 (48%), Gaps = 18/182 (9%)

Query: 33  SLTVWRKSLVICCNGFTVIDSHGNLVYRVDNYVGSCHE-LILMDGSGKSIFTMRRRKKLT 91
            L + RK L I    F + ++ GNL+++V +   S HE  ILMDG G  + T++  K +T
Sbjct: 39  DLAIVRKVLKITDGNFVITNAEGNLLFKVKDPFFSLHEKRILMDGFGTKVLTLKG-KIMT 97

Query: 92  VADSWRVFEG----EVDECSRRKKLSKRPVCYVKKHMMSINSNVLAYVYYGGASSNKRYA 147
           + D W VF G    EVD     K+           +M+ I + +   V+       K+  
Sbjct: 98  MHDRWLVFRGGSTEEVDLLYTVKR----------SNMVQITTKL--DVFLADNIEQKKCD 145

Query: 148 YTVEGSYANRSCKVLDESRRVVAEIKRKKAAIGGVSFGVEVFLLIVHPSFDAAFAMALVL 207
           Y +EG +   SC V      ++    R+K  +  V FG + F L V+P+ D AF  +L++
Sbjct: 146 YRLEGVWLETSCFVYAGDSDIILAQMREKKTMQSVLFGKDNFCLTVNPNVDYAFIASLIV 205

Query: 208 LL 209
           +L
Sbjct: 206 IL 207

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SH27|LOR4_ARATH Protein LURP-one-related 4 OS=Arabidopsis thaliana GN=At1g63410 PE=3 SV=1

 Score = 73.9 bits (180), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 54/187 (28%), Positives = 94/187 (50%), Gaps = 29/187 (15%)

Query: 30  ECTSLTVWRKSLVICCNGFTVIDSHGNLVYRVDNYVGSCHELILMDGSGKSIFTMRRRKK 89
           E  + TVW KSLV   NG TV +S+G + YRV+NY    +E+ +MD  G  +FT+ R+KK
Sbjct: 18  ERETFTVWMKSLVYQTNGLTVYNSNGEITYRVENYDKCSNEVHIMDLHGNILFTI-RKKK 76

Query: 90  LTVADSWRVFE--------GEVDECSRRKKLSKRPVCYVKKHMMSINSNVLAYVYYGGAS 141
           L +  SW V+          EV  C+R K+ S R   +  +   +    +L +       
Sbjct: 77  LWLFGSWYVYRECGSFTSTEEVKPCARIKRSSIRDGDWEVRDETNEVFWILRF------- 129

Query: 142 SNKRYAYTVEGSYANRSCKVLDESRRVVAEIKRKKAAIGGVSFGVEVFLLIVHPSFDAAF 201
            + ++A+           +++D    ++A++K K+++  G++ G +V  L V P  D + 
Sbjct: 130 -DPKFAF-----------QIIDIHGNIIAQVKPKQSS-NGITLGEDVLTLEVKPRVDHSL 176

Query: 202 AMALVLL 208
            + LV +
Sbjct: 177 VVTLVTV 183

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	214
225426130	220	PREDICTED: protein LURP-one-related 17 [	0.985	0.959	0.630	8e-68
255537607	227	conserved hypothetical protein [Ricinus	0.995	0.938	0.611	3e-66
356497269	227	PREDICTED: protein LURP-one-related 17-l	0.985	0.929	0.614	2e-65
224053843	217	predicted protein [Populus trichocarpa]	0.976	0.963	0.612	7e-65
356539569	234	PREDICTED: protein LURP-one-related 17-l	1.0	0.914	0.594	1e-62
224075022	220	predicted protein [Populus trichocarpa]	0.985	0.959	0.583	3e-62
358249034	229	uncharacterized protein LOC100782098 [Gl	1.0	0.934	0.559	1e-58
356528803	224	PREDICTED: protein LURP-one-related 17-l	0.990	0.946	0.553	5e-57
449516521	217	PREDICTED: protein LURP-one-related 17-l	0.981	0.967	0.559	2e-56
449457598	217	PREDICTED: protein LURP-one-related 17-l	0.981	0.967	0.559	3e-56

>gi|225426130|ref|XP_002272759.1| PREDICTED: protein LURP-one-related 17 [Vitis vinifera] gi|297742251|emb|CBI34400.3| unnamed protein product [Vitis vinifera]

 Score =  262 bits (669), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 140/222 (63%), Positives = 169/222 (76%), Gaps = 11/222 (4%)

Query: 2   FVFLKSLSRSVHQE-EPEPALIK---KNIDEGECTSLTVWRKSLVICCNGFTVIDSHGNL 57
            VFLKS S +VH++ +PE   I         G+C SLTVWRKSL+  C GFTVIDS+G+L
Sbjct: 1   MVFLKSRSVTVHEDHQPEEEYIAAAASTTTGGDCRSLTVWRKSLLFSCTGFTVIDSYGDL 60

Query: 58  VYRVDNYVGS-CHELILMDGSGKSIFTMRRRKKLTVADSWRVFEGEVDECSRRKKLS--K 114
           VYRVDNY+G    E+ LMD SGKS+ T+RRRK L + ++W V+EGEV + SR K+ S  K
Sbjct: 61  VYRVDNYIGQRPGEVTLMDASGKSVLTVRRRKNLRLVENWHVYEGEVGDTSRTKRPSSSK 120

Query: 115 RPVCYVKKHM--MSINSNVLAYVYYGGASSNKRYAYTVEGSYANRSCKVLDESRRVVAEI 172
           +P+C VKKH+  +  N NVLAYV+ G  +S+KRYAY +EGSYANRSCKVLD+SRRVVAEI
Sbjct: 121 QPICSVKKHINILHANHNVLAYVFLG--NSDKRYAYRIEGSYANRSCKVLDKSRRVVAEI 178

Query: 173 KRKKAAIGGVSFGVEVFLLIVHPSFDAAFAMALVLLLDQMFS 214
           KRK+A   GVSFGVEVFLLIV P FD+ FAMALVLLLDQMFS
Sbjct: 179 KRKEAMNEGVSFGVEVFLLIVCPGFDSGFAMALVLLLDQMFS 220

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255537607|ref|XP_002509870.1| conserved hypothetical protein [Ricinus communis] gi|223549769|gb|EEF51257.1| conserved hypothetical protein [Ricinus communis]

 Score =  257 bits (656), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 137/224 (61%), Positives = 162/224 (72%), Gaps = 11/224 (4%)

Query: 2   FVFLKSLSRSVHQEEPEPALIKKNI--DEGECTSLTVWRKSLVICCNGFTVIDSHGNLVY 59
           F FLKSLSRSVH EE      +  I  D G CTSLTVWRKSL+I CNGFTVI+SHG+L Y
Sbjct: 4   FFFLKSLSRSVHDEEDHQQQNETKIADDGGTCTSLTVWRKSLIINCNGFTVINSHGDLAY 63

Query: 60  RVDNYVGSCHELILMDGSGKSIFTMRRRK-----KLTVADSWRVFEGEVDE-CSRRKKLS 113
           RVD+Y+   HELILMDGSGKS+ T+ RRK     KL + D+W V  GEV   CS   +L+
Sbjct: 64  RVDSYMVRPHELILMDGSGKSVLTVHRRKMKFLQKLGLGDNWEVCAGEVGRYCSTTTELT 123

Query: 114 KRPVCYVKKHM--MSINSNVLAYVYYGGASSNKR-YAYTVEGSYANRSCKVLDESRRVVA 170
           K+P+  VKKH+  +  N NVLA+VY G     +  Y+Y +EGSY  RSCK++DESR VVA
Sbjct: 124 KKPIWSVKKHISILRGNDNVLAHVYRGSCIEKRNNYSYVIEGSYRQRSCKIMDESRNVVA 183

Query: 171 EIKRKKAAIGGVSFGVEVFLLIVHPSFDAAFAMALVLLLDQMFS 214
           EIKRK+A + GVSFGVEVFLL+V P FD  FAMALVLLLDQMFS
Sbjct: 184 EIKRKEAMVVGVSFGVEVFLLVVQPGFDPGFAMALVLLLDQMFS 227

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356497269|ref|XP_003517483.1| PREDICTED: protein LURP-one-related 17-like [Glycine max]

 Score =  254 bits (648), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 140/228 (61%), Positives = 167/228 (73%), Gaps = 17/228 (7%)

Query: 1   MFVFLKSLSRSVHQEEPEPALIKKNIDEGECTSLTVWRKSLVICCNGFTVIDSHGNLVYR 60
           +F  LKSLSR+VH+E+ E    K    E  CTSLTVWRKSLV+ C GFTVIDSHGNLVYR
Sbjct: 3   VFPRLKSLSRAVHEEQEEE---KNKAAEKLCTSLTVWRKSLVMSCKGFTVIDSHGNLVYR 59

Query: 61  VDNYVGSCHELILMDGSGKSIFTMRRRKKLTVADSWRVFEGEVDECSRRKKL-------- 112
           VDNY+G  +E+ LMD SGKSI TM RR+KL V DSW V+EGEV   + R +         
Sbjct: 60  VDNYIGRPNEVTLMDASGKSILTMCRRRKLGVLDSWFVYEGEVGNNNMRTRTRRSSSNLS 119

Query: 113 --SKRPVCYVKKH--MMSINSNVLAYVYYGGAS-SNKR-YAYTVEGSYANRSCKVLDESR 166
             S RP+C V+KH  ++  N+NV AYVY G +S S+KR  A+T+EGSYA+R+CKVLDE R
Sbjct: 120 KSSNRPICCVRKHVNILHGNTNVQAYVYRGASSHSDKRCAAFTIEGSYAHRTCKVLDECR 179

Query: 167 RVVAEIKRKKAAIGGVSFGVEVFLLIVHPSFDAAFAMALVLLLDQMFS 214
           RVVAEIKRK+A    VSFG+E+F LIVH  FD AFAMALVLLLDQMF+
Sbjct: 180 RVVAEIKRKEANTKNVSFGIEIFQLIVHSGFDPAFAMALVLLLDQMFT 227

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224053843|ref|XP_002298007.1| predicted protein [Populus trichocarpa] gi|222845265|gb|EEE82812.1| predicted protein [Populus trichocarpa]

 Score =  252 bits (643), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 136/222 (61%), Positives = 165/222 (74%), Gaps = 13/222 (5%)

Query: 1   MFVFLKSLSRSVHQEEP--EPALIKKNID-----EGECTSLTVWRKSLVICCNGFTVIDS 53
           M  FLKSLSRSVH +E   EP    + ++     +G+CT LTVWRKSL+I CNGFTVI+S
Sbjct: 1   MIFFLKSLSRSVHDQEHYHEPVAETEEVENKISTDGKCTLLTVWRKSLLISCNGFTVINS 60

Query: 54  HGNLVYRVDNYVGSCHELILMDGSGKSIFTMRRRKKLTV-ADSWRVFEGEVDECSRRKKL 112
            G+LVYRVDNY+    EL+LMDGSGKSI TMRRRKKL V  DSW V+EGEV     R KL
Sbjct: 61  CGDLVYRVDNYIDRPEELVLMDGSGKSILTMRRRKKLGVRIDSWLVYEGEVGNHCARTKL 120

Query: 113 SKRPVCYVKKHMMSINSNVLAYVYYGGASSNKRYAYTVEGSYANRSCKVLDESRRVVAEI 172
           SK P+  V+K+    N N LAYV+ G  SS+KR ++ +EGSY +RSCKVLD SR+V+AEI
Sbjct: 121 SKNPIWCVRKNT---NHNALAYVFRG--SSDKRPSFVIEGSYTHRSCKVLDGSRKVLAEI 175

Query: 173 KRKKAAIGGVSFGVEVFLLIVHPSFDAAFAMALVLLLDQMFS 214
           KRK+A +GGVS+GVEVF+L V P FD  FAM LVL+LDQ+FS
Sbjct: 176 KRKEAIVGGVSYGVEVFVLNVEPGFDPGFAMGLVLILDQIFS 217

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356539569|ref|XP_003538270.1| PREDICTED: protein LURP-one-related 17-like [Glycine max]

 Score =  244 bits (624), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 138/232 (59%), Positives = 165/232 (71%), Gaps = 18/232 (7%)

Query: 1   MFVFLKSLSRSVH--QEEPEPALIKKNIDEGECTSLTVWRKSLVICCNGFTVIDSHGNLV 58
           +F  LKSLSR+VH  QE       KK   E   TSLTVWRKSL++ CNGFTVIDS+GNLV
Sbjct: 3   VFPRLKSLSRAVHEEQEREHDDEEKKKAAEKLYTSLTVWRKSLLMSCNGFTVIDSYGNLV 62

Query: 59  YRVDNYVGSCHELILMDGSGKSIFTMRRRKKLTVADSWRVFEGEVDE------------C 106
           YRVDNY+G  +E+ LMD SGKSI TM RR++L + DSW V+EGEV               
Sbjct: 63  YRVDNYIGRPNEVTLMDASGKSILTMCRRRRLGLLDSWFVYEGEVGNNINNMRTRTRRRS 122

Query: 107 SRRKKLSKRPVCYVKKH--MMSINSNVLAYVYYGGAS-SNKR-YAYTVEGSYANRSCKVL 162
           S   K SK P+C V+KH  ++  N+NV AYVY G +S S+KR  A+T+EGSYA+R+CKVL
Sbjct: 123 SNLSKSSKTPICCVRKHVNILHGNTNVQAYVYRGASSHSDKRCAAFTIEGSYAHRTCKVL 182

Query: 163 DESRRVVAEIKRKKAAIGGVSFGVEVFLLIVHPSFDAAFAMALVLLLDQMFS 214
           DE  RVVAEIKRK+A    VSFG+E+F LIVHP FD AFAMALVLLLDQMF+
Sbjct: 183 DECGRVVAEIKRKEANAKSVSFGIEIFQLIVHPGFDPAFAMALVLLLDQMFT 234

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224075022|ref|XP_002304522.1| predicted protein [Populus trichocarpa] gi|222841954|gb|EEE79501.1| predicted protein [Populus trichocarpa]

 Score =  243 bits (621), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 129/221 (58%), Positives = 165/221 (74%), Gaps = 10/221 (4%)

Query: 1   MFVFLKSLSRSVHQEEP--EP---ALIKKNIDEGECTSLTVWRKSLVICCNGFTVIDSHG 55
           M  FLKS SRSVH +E   EP   A ++  I++G CTSLTVWRKSL+I CNGFTVI+S G
Sbjct: 1   MIFFLKSSSRSVHDQEHHHEPVAEAEVETRINDGTCTSLTVWRKSLLISCNGFTVINSCG 60

Query: 56  NLVYRVDNYVGSCHELILMDGSGKSIFTMRRRKKLTV-ADSWRVFEGEVDECSRRKKLSK 114
           +LVYRVDNY+    EL+LMDGSGKSI TMRRRKKL V   +W V+EGEV       KLSK
Sbjct: 61  DLVYRVDNYIDRPDELVLMDGSGKSILTMRRRKKLGVLVHNWFVYEGEVGNYCATNKLSK 120

Query: 115 RPVCYVKKHM--MSINSNVLAYVYYGGASSNKRYAYTVEGSYANRSCKVLDESRRVVAEI 172
           +P+  V+K++  +  + NVLAYV+ G  S++KR+++ +EGSY  RSCKV+  SR+V+AEI
Sbjct: 121 KPIWCVRKNINILQTSHNVLAYVFRG--STDKRHSFVIEGSYTRRSCKVIGGSRKVLAEI 178

Query: 173 KRKKAAIGGVSFGVEVFLLIVHPSFDAAFAMALVLLLDQMF 213
           KRK+A + G+S+GVEVF+L V P FD  FAM L+L+LDQMF
Sbjct: 179 KRKEAMVEGISYGVEVFVLNVEPGFDPGFAMGLLLILDQMF 219

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358249034|ref|NP_001239726.1| uncharacterized protein LOC100782098 [Glycine max] gi|255646699|gb|ACU23823.1| unknown [Glycine max]

 Score =  231 bits (589), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 127/227 (55%), Positives = 160/227 (70%), Gaps = 13/227 (5%)

Query: 1   MFVFLKSLSRSVHQEEPEPALIKKN----IDEGECTSLT--VWRKSLVICCNGFTVIDSH 54
           +F   K LSR+VH+E+      ++N     +   CTSLT  VWRKSLVI C GFTVIDS+
Sbjct: 3   VFSRFKFLSRAVHEEQEGEHDGERNRYPLTEASLCTSLTLTVWRKSLVISCKGFTVIDSY 62

Query: 55  GNLVYRVDNYVGSCHELILMDGSGKSIFTMRRRKKLTVADSWRVFEGEVDECSRRKKLSK 114
           GNLVYRVDNY+   +ELILMD SG S+ TMRR +KL + D W V+EGE+ + S R K  K
Sbjct: 63  GNLVYRVDNYIMHPNELILMDASGNSLLTMRRSRKLGLVDRWFVYEGEMGKQSTRSKSVK 122

Query: 115 ---RPVCYVKKHMMSIN---SNVLAYVYYGGASSNKRY-AYTVEGSYANRSCKVLDESRR 167
              RPVC V+K +  ++   + V AYVY   + S+KR+ A+TVEGSYA+R+CKVLDE + 
Sbjct: 123 SKERPVCCVRKRVNILDGKANKVQAYVYRAASDSDKRHPAFTVEGSYAHRTCKVLDEYKN 182

Query: 168 VVAEIKRKKAAIGGVSFGVEVFLLIVHPSFDAAFAMALVLLLDQMFS 214
            V EIKRK+A    VSFG+E+F L+VHP FD +FAMALVLLLDQMFS
Sbjct: 183 AVVEIKRKEANTKDVSFGIEIFQLVVHPVFDPSFAMALVLLLDQMFS 229

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356528803|ref|XP_003532987.1| PREDICTED: protein LURP-one-related 17-like [Glycine max]

 Score =  226 bits (576), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 124/224 (55%), Positives = 160/224 (71%), Gaps = 12/224 (5%)

Query: 1   MFVFLKSLSRSVHQEEPEP----ALIKKNIDEGE-CTSLT--VWRKSLVICCNGFTVIDS 53
           +F   K LSR+VH+E+         IK  + EG  CTSLT  VWRKSLVI C GFTVID 
Sbjct: 3   VFSRFKFLSRAVHEEQEGEHDGGEKIKYPLTEGNLCTSLTLTVWRKSLVISCKGFTVIDP 62

Query: 54  HGNLVYRVDNYVGSCHELILMDGSGKSIFTMRRRKKLTVADSWRVFEGEVDECSRRKKLS 113
           +GNLVYRVDNY+   +E+ILMD SG S+ T+RR +KL + DSW V+EGE+ +  ++ K  
Sbjct: 63  YGNLVYRVDNYIVHPNEVILMDASGNSVLTLRRSRKLGLVDSWFVYEGEMGK--QKVKSR 120

Query: 114 KRPVCYVKK--HMMSINSNVLAYVYYGGASSNKRYA-YTVEGSYANRSCKVLDESRRVVA 170
             PVC V+K  +++     V AYVY   + S+KR+A +T+EGSYA+R+CKVLDE ++ VA
Sbjct: 121 DSPVCCVRKRVNILDGKPKVQAYVYRVTSDSDKRHAAFTIEGSYAHRTCKVLDEYKKAVA 180

Query: 171 EIKRKKAAIGGVSFGVEVFLLIVHPSFDAAFAMALVLLLDQMFS 214
           EIKRK+A    VSFG+E+F L+VHP FD +FAMALVLLLDQMFS
Sbjct: 181 EIKRKEANTKDVSFGIEIFQLVVHPGFDTSFAMALVLLLDQMFS 224

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449516521|ref|XP_004165295.1| PREDICTED: protein LURP-one-related 17-like [Cucumis sativus]

 Score =  224 bits (570), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 123/220 (55%), Positives = 154/220 (70%), Gaps = 10/220 (4%)

Query: 2   FVFLKSLSRSVHQEE--PEPALIKKNIDEGECTSLTVWRKSLVICCNGFTVIDSHGNLVY 59
            +F KS S +VHQE   P   L +     G   SLTVWRKSL++ CNGFTVID +GN+VY
Sbjct: 1   MLFFKSSSGAVHQESQLPPEELKETCAVSGSPVSLTVWRKSLLLTCNGFTVIDRNGNIVY 60

Query: 60  RVDNYVGSCHELILMDGSGKSIFTMRRRKKLTVADSWRVFEGEVDECSRRKKLSKRPVCY 119
           RVDNY G   E+ILMDG GKS+ TM R KKL + ++W V+EGEV+  ++ +K   +P+C 
Sbjct: 61  RVDNYTGRPEEMILMDGLGKSVLTMCRSKKLGLGENWCVYEGEVEGKTKGRK--NKPICR 118

Query: 120 VKKHM----MSINSNVLAYVYYGGASSNKRYAYTVEGSYANRSCKVLD-ESRRVVAEIKR 174
           VKK++    +  N  VLA+V Y    S K+YAY+VEGSY  RSCKVLD  SRRVVAE++R
Sbjct: 119 VKKNINILHVDPNRKVLAHV-YDYRISKKKYAYSVEGSYGERSCKVLDGASRRVVAEVRR 177

Query: 175 KKAAIGGVSFGVEVFLLIVHPSFDAAFAMALVLLLDQMFS 214
           K+A  GGV FG EVF+L++ P FD   AMALVLLLDQMFS
Sbjct: 178 KEAVKGGVCFGGEVFVLVIVPGFDCGLAMALVLLLDQMFS 217

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449457598|ref|XP_004146535.1| PREDICTED: protein LURP-one-related 17-like [Cucumis sativus]

 Score =  223 bits (569), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 123/220 (55%), Positives = 154/220 (70%), Gaps = 10/220 (4%)

Query: 2   FVFLKSLSRSVHQEE--PEPALIKKNIDEGECTSLTVWRKSLVICCNGFTVIDSHGNLVY 59
            +F KS S +VHQE   P   L +     G   SLTVWRKSL++ CNGFTVID +GN+VY
Sbjct: 1   MLFFKSSSGAVHQESQLPPEELKETCAVSGSPVSLTVWRKSLLLSCNGFTVIDRNGNIVY 60

Query: 60  RVDNYVGSCHELILMDGSGKSIFTMRRRKKLTVADSWRVFEGEVDECSRRKKLSKRPVCY 119
           RVDNY G   E+ILMDG GKS+ TM R KKL + ++W V+EGEV+  ++ +K   +P+C 
Sbjct: 61  RVDNYTGRPEEMILMDGLGKSVLTMCRSKKLGLGENWCVYEGEVEGKTKGRK--NKPICR 118

Query: 120 VKKHM----MSINSNVLAYVYYGGASSNKRYAYTVEGSYANRSCKVLD-ESRRVVAEIKR 174
           VKK++    +  N  VLA+V Y    S K+YAY+VEGSY  RSCKVLD  SRRVVAE++R
Sbjct: 119 VKKNINILHVDPNRKVLAHV-YDYRISKKKYAYSVEGSYGERSCKVLDGASRRVVAEVRR 177

Query: 175 KKAAIGGVSFGVEVFLLIVHPSFDAAFAMALVLLLDQMFS 214
           K+A  GGV FG EVF+L++ P FD   AMALVLLLDQMFS
Sbjct: 178 KEAVKGGVCFGGEVFVLVIVPGFDCGLAMALVLLLDQMFS 217

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	214
TAIR|locus:2160427	221	AT5G41590 "AT5G41590" [Arabido	0.976	0.945	0.477	4.2e-47
TAIR|locus:2064179	196	AT2G38640 "AT2G38640" [Arabido	0.841	0.918	0.42	4.6e-34
TAIR|locus:2016299	210	AT1G80120 "AT1G80120" [Arabido	0.845	0.861	0.383	6.6e-26
TAIR|locus:2093242	220	AT3G15810 "AT3G15810" [Arabido	0.775	0.754	0.351	3.4e-22
TAIR|locus:2091040	230	AT3G14260 "AT3G14260" [Arabido	0.789	0.734	0.353	3.5e-20
TAIR|locus:2181082	217	AT5G01750 "AT5G01750" [Arabido	0.789	0.778	0.303	2e-17
TAIR|locus:2197046	580	AT1G53880 "AT1G53880" [Arabido	0.733	0.270	0.333	4.7e-16
TAIR|locus:2814880	580	AT1G53900 "AT1G53900" [Arabido	0.733	0.270	0.333	4.7e-16
TAIR|locus:2197036	217	AT1G53870 "AT1G53870" [Arabido	0.757	0.746	0.331	4.7e-16
TAIR|locus:2081481	194	AT3G11740 "AT3G11740" [Arabido	0.855	0.943	0.270	3.1e-12

TAIR|locus:2160427 AT5G41590 "AT5G41590" [Arabidopsis thaliana (taxid:3702)]

 Score = 493 (178.6 bits), Expect = 4.2e-47, P = 4.2e-47
 Identities = 108/226 (47%), Positives = 147/226 (65%)

Query:     1 MFVFLKSLSRSVHQEEPEPALIKKNIDE------GECTSLTVWRKSLVICCNGFTVIDSH 54
             MF FLK  SRSVH E+  P+  +  +        G CT+LTVWRKSL++ C GFTVIDS+
Sbjct:     1 MFPFLKQRSRSVHGEDA-PSSTESTVSVAAADIGGACTTLTVWRKSLLVSCEGFTVIDSN 59

Query:    55 GNLVYRVDNYVGSC-HELILMDGSGKSIFTMRRRKKLTVADSWRVFEGEVDECSRRKKLS 113
             G+L+YRVDNY  +   ELILMD  G S+  M R KK+T+ DSW ++E   ++     K+ 
Sbjct:    60 GDLIYRVDNYARTRPEELILMDKDGNSLLLMHRTKKITLVDSWGIYEA--NDTKGETKIP 117

Query:   114 KRPVCYVKKHM----MSINSNVLAYVYYGGASSNKRYAYTVEGSYANRSCKVLDES-RRV 168
             K P  Y++K++    +S  S++LAYVY G  S +K+ +Y ++GSY  +SCK++     + 
Sbjct:   118 KCPTWYMRKNLKMNILSTKSDILAYVYSG--SFDKKNSYIIKGSYRCKSCKIVHVPLNKT 175

Query:   169 VAEIKRKKAAIGGVSFGVEVFLLIVHPSFDAAFAMALVLLLDQMFS 214
             V EIKRK+    GV FG +VF L+V+P FD   AMALVLLLDQMFS
Sbjct:   176 VVEIKRKEVRTKGVRFGSDVFDLVVNPGFDTGLAMALVLLLDQMFS 221

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2064179 AT2G38640 "AT2G38640" [Arabidopsis thaliana (taxid:3702)]

 Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
 Identities = 84/200 (42%), Positives = 125/200 (62%)

Query:    19 PALIKKNI-DEGECTSLTVWRKSLVICCNGFTVIDSHGNLVYRVDNYVGSCHE-LILMDG 76
             P+  ++++ D      LTVW+KSL+  C+GFTV +++G LV+RVDNY+    + ++LMD 
Sbjct:     9 PSTCEESLCDSKAAVVLTVWKKSLLFNCDGFTVYNANGELVFRVDNYMNCPRDNIVLMDA 68

Query:    77 SGKSIFTMRRRKKLTVADSWRVFEGEVDECSRRKKLSKRPVCYVKKHMMSI-NSNVLAYV 135
             SG  + ++RR KKL++ D W V++GE +         + P+   +K++  I N   LA+V
Sbjct:    69 SGFPLLSIRR-KKLSLGDCWMVYDGETE---------RDPIFTARKNVSIISNRKSLAWV 118

Query:   136 YYGGASSNKRYAYTVEGSYANRSCKVLDESR--RVVAEIKRKKAAIGGVSFGVEVFLLIV 193
                  S+ K   Y +EGSY  RSCK+LDE R  +  AEIKRK+  IGGV+FG +V+ LIV
Sbjct:   119 -----SAKKTVLYEIEGSYGQRSCKILDERRNKKKTAEIKRKETVIGGVAFGKDVYKLIV 173

Query:   194 HPSFDAAFAMALVLLLDQMF 213
                 +   AMAL ++LDQMF
Sbjct:   174 ESEMEPRVAMALTIILDQMF 193

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2016299 AT1G80120 "AT1G80120" [Arabidopsis thaliana (taxid:3702)]

 Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
 Identities = 76/198 (38%), Positives = 112/198 (56%)

Query:    21 LIKKNIDEGECTSLTVWRKSLVICCNGFTVIDSHGNLVYRVDNYVG----SCHELILMDG 76
             L+      GE  SLTV + SL    +GFTV D  G+LV+RVD+Y G       E++LMD 
Sbjct:     6 LVDDEFIHGEERSLTVRKTSLFFAGDGFTVYDCKGSLVFRVDSYGGPNTRDTDEVVLMDA 65

Query:    77 SGKSIFTMRRRKKLTVADSWRVFEGEVDECSRRKKLSKRPVCYVKKHMMSINSNVLAYVY 136
              G+ + T+RR K+ ++   W  + GE  +        ++P+  V++  + I  N +    
Sbjct:    66 HGRCLLTLRR-KRPSLRRRWEGYLGERSD-------GQKPIFGVRRSSI-IGRNSVTVEV 116

Query:   137 YGGASSNKRYAYTVEGSYANRSCKVLD-ESRRVVAEIKRKKAAIGGVSFGVEVFLLIVHP 195
             YG    ++   Y +EGS+  R+C V++ E+RR VAEI+RK  A   V  G +VF L V P
Sbjct:   117 YGDYQCSE---YLIEGSFGARNCTVVEAETRRKVAEIRRKVDASTNVMLGKDVFSLNVKP 173

Query:   196 SFDAAFAMALVLLLDQMF 213
              FD AFAM LVL+LDQ++
Sbjct:   174 GFDGAFAMGLVLVLDQIY 191

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2093242 AT3G15810 "AT3G15810" [Arabidopsis thaliana (taxid:3702)]

 Score = 258 (95.9 bits), Expect = 3.4e-22, P = 3.4e-22
 Identities = 64/182 (35%), Positives = 97/182 (53%)

Query:    34 LTVWRKSLVICCNGFTVIDSHGNLVYRVDNYVGSCH---ELILMDGSGKSIFTMRRRKKL 90
             LTV + SL    +GF   D  G++++RVD+Y        E++LMD +GK + T++R K+ 
Sbjct:    33 LTVCKTSLFYTGDGFAAYDCRGDIIFRVDSYGPDTRDNDEIVLMDATGKCLLTVKR-KRP 91

Query:    91 TVADSWRVFEGEVDECSRRKKLSKRPVCYVKKHMMSINSNVLAYVYYGGASSNKRYAYTV 150
             T+   W  F GE  E        ++P+  V++  + I    +    Y G        Y +
Sbjct:    92 TLHQRWEGFLGERSE-------GQKPIFSVRRSSI-IGRCTMEVEVYDGTGEE----YII 139

Query:   151 EGSYANRSCKVLDESRRVVAEIKRKKAAIGGVSFGVEVFLLIVHPSFDAAFAMALVLLLD 210
             +G ++ RSC + D  +  VAEIKRK  A   V  G +VF L + P FD AFAM LV++LD
Sbjct:   140 DGDFSQRSCLIYDTKKCTVAEIKRKVDASTNVMLGRDVFTLEIKPGFDGAFAMGLVVVLD 199

Query:   211 QM 212
             Q+
Sbjct:   200 QI 201

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2091040 AT3G14260 "AT3G14260" [Arabidopsis thaliana (taxid:3702)]

 Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
 Identities = 65/184 (35%), Positives = 100/184 (54%)

Query:    30 ECTSLTVWRKSLVICCNGFTVIDSHGNLVYRVDNYVG-SCHELILMDGSGKSIFTMRRRK 88
             E  S T+W KSLV   NG TV DS GN++YRVDNY   SC E+ LMD SG  +FT+RR+K
Sbjct:    47 EQESFTIWMKSLVFNTNGCTVFDSKGNIIYRVDNYNSKSCREVYLMDLSGHVLFTLRRQK 106

Query:    89 KLTVADSWRVFEGEVDECSRRKKLSKRPVCYVKKHMMSI--NSNVLAY-VYYGGASSNKR 145
                +  +W   EG     +  +  +K     VK ++  +    +  +Y V  G   ++++
Sbjct:   107 -FGLFKTW---EGYRSSSATVESTTKLEYFRVKNNVFQVPNKDSSSSYRVNAGSCRNDEQ 162

Query:   146 YAYTV--EGSYANRSCKVLDESRRVVAEIKRKKAAIGGVSFGVEVFLLIVHPSFDAAFAM 203
             Y Y +   GS    S  + D   +++AE+KRK++ I G+  G +V  ++V    D +F +
Sbjct:   163 YCYKMVTRGS----SLAIEDNCGKLLAEVKRKQS-INGLKLGDDVLTMMVESQVDHSFII 217

Query:   204 ALVL 207
              LVL
Sbjct:   218 GLVL 221

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2181082 AT5G01750 "AT5G01750" [Arabidopsis thaliana (taxid:3702)]

 Score = 213 (80.0 bits), Expect = 2.0e-17, P = 2.0e-17
 Identities = 55/181 (30%), Positives = 93/181 (51%)

Query:    34 LTVWRKSLVICCNGFTVIDSHGNLVYRVDNYVGSCHEL-ILMDGSGKSIFTMRRRKKLTV 92
             + + RK + +    F + D +GNL+++V   V   H+  +L+DGSG  + T+R  K +++
Sbjct:    40 MAIVRKMMSLTDGNFVITDVNGNLLFKVKEPVFGLHDKRVLLDGSGTPVVTLRE-KMVSM 98

Query:    93 ADSWRVFEGEVDECSRRKKLSKRPVCYVKKHMMSINSNVLAYVYYGGASSNKRYAYTVEG 152
              D W+VF G   +        +R + Y  K    +       V+ G     KR  + V+G
Sbjct:    99 HDRWQVFRGGSTD--------QRDLLYTVKRSSMLQLKTKLDVFLGHNKDEKRCDFRVKG 150

Query:   153 SYANRSCKVL-DESRRVVAEIKRKKAAIGGVSFGVEVFLLIVHPSFDAAFAMALVLLLDQ 211
             S+  RSC V   ES  +VA++ RK   +  V  G + F + V+P+ D AF  +LV++LD 
Sbjct:   151 SWLERSCVVYAGESDAIVAQMHRKHT-VQSVFLGKDNFSVTVYPNVDYAFIASLVVILDD 209

Query:   212 M 212
             +
Sbjct:   210 V 210

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=IDA

GO:0006569 "tryptophan catabolic process" evidence=RCA

GO:0006995 "cellular response to nitrogen starvation" evidence=RCA

GO:0009684 "indoleacetic acid biosynthetic process" evidence=RCA

GO:0030003 "cellular cation homeostasis" evidence=RCA

GO:0070838 "divalent metal ion transport" evidence=RCA

TAIR|locus:2197046 AT1G53880 "AT1G53880" [Arabidopsis thaliana (taxid:3702)]

 Score = 209 (78.6 bits), Expect = 4.7e-16, P = 4.7e-16
 Identities = 57/171 (33%), Positives = 87/171 (50%)

Query:    30 ECTSLTVWRKSLVICCNGFTVIDSHGNLVYRVDNYVG-SCHELILMDGSGKSIFTMRRRK 88
             E  S T+W +SLV    G TV DS GNL+YRVDNY   SC E+ LMD  GK +FT+R+ K
Sbjct:    28 EKESFTIWMRSLVFHSKGCTVFDSKGNLIYRVDNYNSKSCSEVYLMDLYGKILFTLRQ-K 86

Query:    89 KLTVADSWRVFEGEVDECSRRKKLSKRPVCYVKKHMMSINSNVLAYVYYGGASSNKRYA- 147
             KL +  SW+ +         RK     P      + + + S ++   +       KR + 
Sbjct:    87 KLGLFKSWKGYNSTGTRFQLRKNFKILPKGSSSSYKVVMGSRIVDGDHQSCYKIVKRKSV 146

Query:   148 YTVEGSYANRSCKVLDESRRVVAEIKRKKAAIGGVSFGVEVFLLIVHPSFD 198
             +T+E           D S R++AE+K+K++ I  +  G +V  ++V P  +
Sbjct:   147 FTIE-----------DGSGRLLAEVKKKQSNIKSLDLGKDVLTMMVEPQLE 186

GO:0003743 "translation initiation factor activity" evidence=ISS;IBA

GO:0005085 "guanyl-nucleotide exchange factor activity" evidence=IBA

GO:0005525 "GTP binding" evidence=ISS

GO:0005851 "eukaryotic translation initiation factor 2B complex" evidence=ISS;IBA

GO:0006413 "translational initiation" evidence=ISS

GO:0006446 "regulation of translational initiation" evidence=IBA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050790 "regulation of catalytic activity" evidence=IBA

TAIR|locus:2814880 AT1G53900 "AT1G53900" [Arabidopsis thaliana (taxid:3702)]

 Score = 209 (78.6 bits), Expect = 4.7e-16, P = 4.7e-16
 Identities = 57/171 (33%), Positives = 87/171 (50%)

Query:    30 ECTSLTVWRKSLVICCNGFTVIDSHGNLVYRVDNYVG-SCHELILMDGSGKSIFTMRRRK 88
             E  S T+W +SLV    G TV DS GNL+YRVDNY   SC E+ LMD  GK +FT+R+ K
Sbjct:    28 EKESFTIWMRSLVFHSKGCTVFDSKGNLIYRVDNYNSKSCSEVYLMDLYGKILFTLRQ-K 86

Query:    89 KLTVADSWRVFEGEVDECSRRKKLSKRPVCYVKKHMMSINSNVLAYVYYGGASSNKRYA- 147
             KL +  SW+ +         RK     P      + + + S ++   +       KR + 
Sbjct:    87 KLGLFKSWKGYNSTGTRFQLRKNFKILPKGSSSSYKVVMGSRIVDGDHQSCYKIVKRKSV 146

Query:   148 YTVEGSYANRSCKVLDESRRVVAEIKRKKAAIGGVSFGVEVFLLIVHPSFD 198
             +T+E           D S R++AE+K+K++ I  +  G +V  ++V P  +
Sbjct:   147 FTIE-----------DGSGRLLAEVKKKQSNIKSLDLGKDVLTMMVEPQLE 186

GO:0003743 "translation initiation factor activity" evidence=ISS;IBA

GO:0005085 "guanyl-nucleotide exchange factor activity" evidence=IBA

GO:0005525 "GTP binding" evidence=ISS

GO:0005851 "eukaryotic translation initiation factor 2B complex" evidence=ISS;IBA

GO:0006413 "translational initiation" evidence=ISS

GO:0006446 "regulation of translational initiation" evidence=IBA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050790 "regulation of catalytic activity" evidence=IBA

TAIR|locus:2197036 AT1G53870 "AT1G53870" [Arabidopsis thaliana (taxid:3702)]

 Score = 200 (75.5 bits), Expect = 4.7e-16, P = 4.7e-16
 Identities = 58/175 (33%), Positives = 84/175 (48%)

Query:    35 TVWRKSLVICCNGFTVIDSHGNLVYRVDNYVGSC--HELILMDGSGKSIFTMRRRKKLTV 92
             T+W KSLV    G TV DS GNL+YRVDNY      +E+  MD +GK +FT+R+ KKL  
Sbjct:    45 TIWMKSLVFNSKGCTVFDSKGNLIYRVDNYDSKSWSNEVYFMDLNGKILFTLRQ-KKLGF 103

Query:    93 ADSWRVFEGEVDECSRRKKLSKRPVCYVKKHMMSINSNVLAYVYYGGASSNKRYAYTVEG 152
               SW  +         RK     P      + + + S ++     G   S   Y     G
Sbjct:   104 FKSWEGYNSTGTRFRLRKIFKILPRESSSSYKVVMGSRIVD----GDQQSC--YKIVNRG 157

Query:   153 SYANRSCKVLDESRRVVAEIKRKKAAIGGVSFGVEVFLLIVHPSFDAAFAMALVL 207
             S       + D S R++AE+K K + I G+  G +V  ++V P  D +  M +V+
Sbjct:   158 SVF----AIKDGSGRLMAEVKNKLSDISGLDLGDDVLTMMVEPQLDHSLIMGIVI 208

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

TAIR|locus:2081481 AT3G11740 "AT3G11740" [Arabidopsis thaliana (taxid:3702)]

 Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
 Identities = 53/196 (27%), Positives = 96/196 (48%)

Query:    20 ALIKKNIDEGECTSLTVWRKSLVICCNGFTVIDSHGNLVYRVDNYVGSCHEL-ILMDGSG 78
             A++  N        L + RK + +    F V D +GNL+++V   + S  +  IL+D   
Sbjct:     2 AIVSPNFCAPYPIELGIVRKVMTLTDGNFAVTDVNGNLLFKVKEPLFSISDKRILLDAYD 61

Query:    79 KSIFTMRRRKKLTVADSWRVFEGE-VDECSRRKKLSKRPVCYVKKHMMSINSNVLAYVYY 137
               I T+R  K +++ D W V+ G+  D+      L +  +  + K  + I    LA+   
Sbjct:    62 TPILTLRENK-VSLHDRWLVYRGKSTDQSDLLYTLKRSSMIQIMKPKLDI---FLAH--- 114

Query:   138 GGASSNKRYAYTVEGSYANRSCKVL-DESRRVVAEIKRKKAAIGGVSFGVEVFLLIVHPS 196
                   K   + V+GS+ +RSC V   +S  +VA++ +K  A   +  G   F + V+P+
Sbjct:   115 --NKEMKICDFHVKGSWIDRSCVVYAGKSDAIVAQMHKKHTA-QSILIGKSNFSVTVYPN 171

Query:   197 FDAAFAMALVLLLDQM 212
              D AF ++L+++LD +
Sbjct:   172 VDFAFIVSLIVILDDI 187

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
A0MFL4	LOR17_ARATH	No assigned EC number	0.4778	0.9766	0.9457	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00002527001 SubName- Full=Chromosome chr2 scaffold_132, whole genome shotgun sequence; (220 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	214
pfam04525	185	pfam04525, Tub_2, Tubby C 2	6e-46

>gnl|CDD|218129 pfam04525, Tub_2, Tubby C 2

 Score =  149 bits (379), Expect = 6e-46
 Identities = 72/184 (39%), Positives = 103/184 (55%), Gaps = 13/184 (7%)

Query: 29  GECTSLTVWRKSLVICCNGFTVIDSHGNLVYRVDNYVGSCH-ELILMDGSGKSIFTMRRR 87
            E   LTVWRKSLV   +GFTV DS+GNLV+RVD Y      E +LMD SG  + T+ RR
Sbjct: 11  PEPEDLTVWRKSLVFNGDGFTVYDSNGNLVFRVDGYAFGLSDERVLMDSSGNPLLTI-RR 69

Query: 88  KKLTVADSWRVFEGEVDECSRRKKL---SKRPVCYVKKHMMSINSNVLAYVYYGGASSNK 144
           KKL++ D W V+ GE    +  K      +R      K   S+ S   + V      +  
Sbjct: 70  KKLSLHDRWEVYRGEG---TEGKDPLFTVRRSSIVQLKTSSSVFSKRNSNVIVDDEKNCD 126

Query: 145 RYAYTVEGSYANRSCKVLDESRRVVAEIKRKKAAIGGVSFGVEVFLLIVHPSFDAAFAMA 204
              + ++GS+ +RSCK+ D+S +++AE+KR+     GV  G +V+ + V P  D AF MA
Sbjct: 127 ---FDIKGSFLDRSCKIYDDSDKLIAEVKRQ--TSKGVFLGKDVYTVTVKPEVDYAFIMA 181

Query: 205 LVLL 208
           LV++
Sbjct: 182 LVVV 185

The structure of this family has been solved. It comprises a 12-stranded beta barrel with a central C-terminal alpha helix. This helix is thought to be a transmembrane helix. It is structurally similar to the C-terminal domain of the Tubby protein. In plants it plays a role in defense against pathogens. Length = 185

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	214
PF04525	187	Tub_2: Tubby C 2; InterPro: IPR007612 This is a fa	100.0
COG4894	159	Uncharacterized conserved protein [Function unknow	100.0
PF03803	221	Scramblase: Scramblase ; InterPro: IPR005552 Scram	99.6
COG4894	159	Uncharacterized conserved protein [Function unknow	98.08
PF04525	187	Tub_2: Tubby C 2; InterPro: IPR007612 This is a fa	97.72
KOG0621	292	consensus Phospholipid scramblase [Cell wall/membr	97.67
PF03803	221	Scramblase: Scramblase ; InterPro: IPR005552 Scram	96.63

>PF04525 Tub_2: Tubby C 2; InterPro: IPR007612 This is a family of plant and bacterial uncharacterised proteins

Probab=100.00  E-value=2.1e-42  Score=285.84  Aligned_cols=173  Identities=32%  Similarity=0.501  Sum_probs=105.4

Q ss_pred             ccCCCCCceEEEEEEEEeeeEeCCCEEEEeCCCCEEEEEEe-ec-CCCCeEEEEcCCCCeEEEEEeeecccccceeEEEe
Q 039555           23 KKNIDEGECTSLTVWRKSLVICCNGFTVIDSHGNLVYRVDN-YV-GSCHELILMDGSGKSIFTMRRRKKLTVADSWRVFE  100 (214)
Q Consensus        23 ~~~~~~~~~~~l~V~~k~~~~sg~~f~V~D~~G~~vf~V~g-~~-s~~~~~~l~D~~G~~L~~ir~~k~ls~~~~w~v~~  100 (214)
                      +||  +.+|++|+||+|.+++++++|+|+|++|+++|+|+| +. ++++++.|+|++|+||++|++ |.++++++|++|+
T Consensus         7 ~~~--~~~~~~l~v~~k~~~~~~~~f~V~D~~G~~vf~V~g~~~~s~~~~~~l~D~~G~~L~~i~~-k~~~l~~~w~i~~   83 (187)
T PF04525_consen    7 QYC--SPQPVTLTVKKKSLSFSGDDFTVYDENGNVVFRVDGGKFFSIGKKRTLMDASGNPLFTIRR-KLFSLRPTWEIYR   83 (187)
T ss_dssp             GGB---SS-EEEEEE----------EEEEETTS-EEEEEE--SCTTBTTEEEEE-TTS-EEEEEE---------EEEEEE
T ss_pred             HHc--CCCceEEEEEEEEeeecCCCEEEEcCCCCEEEEEEEecccCCCCEEEEECCCCCEEEEEEe-eecccceEEEEEE
Confidence            678  899999999999999999999999999999999999 77 999999999999999999999 9999999999999


Q ss_pred             CCcchhhhcccCCCCceEEEEeeecc-CCccEEEEEEeccC-----CCCCceeEEEEeeeCCccEEEEeCCCcEEEEEEe
Q 039555          101 GEVDECSRRKKLSKRPVCYVKKHMMS-INSNVLAYVYYGGA-----SSNKRYAYTVEGSYANRSCKVLDESRRVVAEIKR  174 (214)
Q Consensus       101 g~~~~~~~~~~~~~~~lf~vkk~~~~-~k~~~~~~V~~~~~-----~~~~~~~~~v~G~~~~~~~~I~~~~g~~VAeV~r  174 (214)
                      +++.       +..+++|+||+++.+ .++  .+.+|+...     ..++.++|+|+|||++++|+|++.+|++||||+|
T Consensus        84 ~~~~-------~~~~~i~tvkk~~~~~~~~--~~~~f~~~~~~~~~~~~~~~~~~i~G~~~~~~~~I~~~~g~~VA~i~r  154 (187)
T PF04525_consen   84 GGGS-------EGKKPIFTVKKKSMLQNKD--SFDVFLPPKSNISIDDSEGPDFEIKGNFWDRSFTIYDSGGRVVAEISR  154 (187)
T ss_dssp             TT----------GGGEEEEEE------------EEEEET--T----------SEEEES-TTTT--EEEECC--EEEEEEE
T ss_pred             CCCC-------ccCceEEEEEEecccCCCc--ceeEEEecccceeecCCCCceEEEEEEecCcEEEEEEcCCCEEEEEec
Confidence            8843       224689999999766 566  678887632     2356789999999999999999766999999999


Q ss_pred             eeeccCCeeeeeceEEEEEeCCCCHHHHHHHHHH
Q 039555          175 KKAAIGGVSFGVEVFLLIVHPSFDAAFAMALVLL  208 (214)
Q Consensus       175 k~~~~~~~~~g~dtY~l~V~pgvD~ali~alvv~  208 (214)
                      ++. .+.++.|+|+|.|+|+||+|++|++|||||
T Consensus       155 k~~-~k~~~~~~dty~l~V~pg~D~~lv~alvvi  187 (187)
T PF04525_consen  155 KYS-SKKWFSGRDTYTLTVAPGVDQALVVALVVI  187 (187)
T ss_dssp             -----------B-SEEEEE-TTSBHHHHHHHHHH
T ss_pred             ccc-eeeEEecCcEEEEEEcCCCCHHHheeEEeC
Confidence            887 457788999999999999999999999987

; PDB: 1ZXU_A 2Q4M_A.

>COG4894 Uncharacterized conserved protein [Function unknown]

Probab=100.00  E-value=2.8e-34  Score=224.48  Aligned_cols=152  Identities=22%  Similarity=0.361  Sum_probs=138.1

Q ss_pred             EEEEEEEEeeeEeCCCEEEEeCCCCEEEEEEeec-CCCCeEEEEcCCCCeEEEEEeeecccccceeEEEeCCcchhhhcc
Q 039555           32 TSLTVWRKSLVICCNGFTVIDSHGNLVYRVDNYV-GSCHELILMDGSGKSIFTMRRRKKLTVADSWRVFEGEVDECSRRK  110 (214)
Q Consensus        32 ~~l~V~~k~~~~sg~~f~V~D~~G~~vf~V~g~~-s~~~~~~l~D~~G~~L~~ir~~k~ls~~~~w~v~~g~~~~~~~~~  110 (214)
                      .+|.|+||..++ |++|.|+|.+|+.+|+|+|++ ++++.+++.|++|.+|.+|++ |+++++|+|++-.|+        
T Consensus         6 ~tl~mkQk~~~~-gd~f~I~d~dgE~af~VeGs~f~i~dtlti~Da~G~~l~~i~~-kll~l~~~yeI~d~~--------   75 (159)
T COG4894           6 ITLFMKQKMFSF-GDAFHIYDRDGEEAFKVEGSFFSIGDTLTITDASGKTLVSIEQ-KLLSLLPRYEISDGG--------   75 (159)
T ss_pred             HhHhhhhhhhhc-ccceEEECCCCcEEEEEeeeEEeeCceEEEEecCCCChHHHHH-HHhhccceeEEEcCC--------
Confidence            477888886555 899999999999999999998 999999999999999999999 999999999999987        


Q ss_pred             cCCCCceEEEEeeeccCCccEEEEEEeccCCCCCceeEEEEeeeCCccEEEEeCCCcEEEEEEeeeeccCCeeeeeceEE
Q 039555          111 KLSKRPVCYVKKHMMSINSNVLAYVYYGGASSNKRYAYTVEGSYANRSCKVLDESRRVVAEIKRKKAAIGGVSFGVEVFL  190 (214)
Q Consensus       111 ~~~~~~lf~vkk~~~~~k~~~~~~V~~~~~~~~~~~~~~v~G~~~~~~~~I~~~~g~~VAeV~rk~~~~~~~~~g~dtY~  190 (214)
                          ...|.++|+.+++++  ++.+.        +.+++++||+|+.+|++.++ +.++|+|+|||..      |+|||.
T Consensus        76 ----g~~~~vrKK~tf~Rd--k~e~d--------~~~~eihGNi~d~efkl~dg-~~~~aeVsKkwf~------~rdTY~  134 (159)
T COG4894          76 ----GTVCEVRKKVTFSRD--KFEID--------GLNWEIHGNIWDDEFKLTDG-ENVRAEVSKKWFS------WRDTYH  134 (159)
T ss_pred             ----CCEEEEEEEEEEEee--eEEEc--------CCCeEEecceeceEEEEecC-CceehhheeeeEe------ccceEE
Confidence                349999999999888  55543        24499999999999999998 6699999999976      899999


Q ss_pred             EEEeCCCCHHHHHHHHHHhccccC
Q 039555          191 LIVHPSFDAAFAMALVLLLDQMFS  214 (214)
Q Consensus       191 l~V~pgvD~ali~alvv~lD~i~~  214 (214)
                      |+|+|+.|.++|+++|||||+|.+
T Consensus       135 l~vapde~a~lii~i~VaLD~v~~  158 (159)
T COG4894         135 LQVAPDEDALLIIAIAVALDMVLY  158 (159)
T ss_pred             EEEcCchhhHHHHHHHHHHHHHhc
Confidence            999999999999999999999865

>PF03803 Scramblase: Scramblase ; InterPro: IPR005552 Scramblase is palmitoylated and contains a potential protein kinase C phosphorylation site

Probab=99.60  E-value=2.1e-13  Score=115.06  Aligned_cols=163  Identities=13%  Similarity=0.238  Sum_probs=126.1

Q ss_pred             EEEEEEEeeeE-------eCCCEEEEeCCCCEEEEEEeec----------CCCCeEEEEcCCCCeEEEEEeeecccc---
Q 039555           33 SLTVWRKSLVI-------CCNGFTVIDSHGNLVYRVDNYV----------GSCHELILMDGSGKSIFTMRRRKKLTV---   92 (214)
Q Consensus        33 ~l~V~~k~~~~-------sg~~f~V~D~~G~~vf~V~g~~----------s~~~~~~l~D~~G~~L~~ir~~k~ls~---   92 (214)
                      .+.|+|+...+       ..+.|.|+|.+|+.+|.+.-..          ..+-+..++|+.|++++++++ ..-..   
T Consensus        23 ~l~I~Q~~e~~e~~~~~e~~N~Y~I~n~~g~~i~~~~E~s~~~~R~~~~~~R~f~~~i~D~~g~~vl~i~R-p~~c~~C~  101 (221)
T PF03803_consen   23 QLLIKQQIEPLEIFTGFETPNRYDIKNPNGQQIYYAVEESDCCSRQCCGSHRPFKMHIYDNYGREVLTIER-PFKCCSCC  101 (221)
T ss_pred             EEEEEEEEEEeceecccccCceEEEECCCCCEEEEEEEeCcceeeeecCCCCCEEEEEEecCCCEEEEEEc-CCcceecc
Confidence            56676765432       2579999999999999886532          124467899999999999999 54322   


Q ss_pred             ---cceeEEEeCCcchhhhcccCCCCceEEEEeeeccCCccEEEEEEeccCCCCCceeEEEEee------eCCccEEEEe
Q 039555           93 ---ADSWRVFEGEVDECSRRKKLSKRPVCYVKKHMMSINSNVLAYVYYGGASSNKRYAYTVEGS------YANRSCKVLD  163 (214)
Q Consensus        93 ---~~~w~v~~g~~~~~~~~~~~~~~~lf~vkk~~~~~k~~~~~~V~~~~~~~~~~~~~~v~G~------~~~~~~~I~~  163 (214)
                         ..+.+|+.+.           +.++.+|+++++++++  +++|+-++    +..-+.|+|.      +.+..|.|++
T Consensus       102 ~~~~~~~~V~~p~-----------g~~iG~I~q~~~~~~~--~f~I~d~~----~~~~~~I~gp~~~~~~~~~~~F~I~~  164 (221)
T PF03803_consen  102 PCCLQEMEVESPP-----------GNLIGSIRQPFSCCRP--NFDIFDAN----GNPIFTIKGPCCCCSCCCDWEFEIKD  164 (221)
T ss_pred             cccceeEEEecCC-----------CcEEEEEEEcCcccce--EEEEEECC----CceEEEEeCCcceeccccceeeeeec
Confidence               2566666654           5899999999998888  77888642    3567899987      4577899999


Q ss_pred             CCCcEEEEEEeeeeccCC-eeeeeceEEEEEeCCCCH---HHHHHHHHHhcccc
Q 039555          164 ESRRVVAEIKRKKAAIGG-VSFGVEVFLLIVHPSFDA---AFAMALVLLLDQMF  213 (214)
Q Consensus       164 ~~g~~VAeV~rk~~~~~~-~~~g~dtY~l~V~pgvD~---ali~alvv~lD~i~  213 (214)
                      .+|+.||+|+|+|..... .+-..|.|.|+..+..|.   |+++|.++.+|.++
T Consensus       165 ~~~~~vg~I~k~w~G~~~e~~t~~d~f~i~Fp~~l~~~~Kalll~a~~liD~~~  218 (221)
T PF03803_consen  165 PNGQEVGSITKKWSGFCRELFTDADNFVIEFPPDLDVEQKALLLGAAFLIDYMY  218 (221)
T ss_pred             ccCcEEEEEEEecCCcchhhccccceEEEEcCCCCCHHHHHHHHHHHHHhhhhh
Confidence            778999999999865422 344689999999988875   69999999999886

Scramblase exhibits Ca2+-activated phospholipid scrambling activity in vitro. There are also possible SH3 and WW binding motifs. Scramblase is involved in the redistribution of phospholipids after cell activation or injury [].

>COG4894 Uncharacterized conserved protein [Function unknown]

Probab=98.08  E-value=5.4e-06  Score=65.71  Aligned_cols=69  Identities=16%  Similarity=0.257  Sum_probs=60.8

Q ss_pred             CCceEEEEEEEEeeeEeCCCEEEEeCCCCEEEEEEeec-CCCCeEEEEcCCCCeEEEEEeeecccccceeEEE
Q 039555           28 EGECTSLTVWRKSLVICCNGFTVIDSHGNLVYRVDNYV-GSCHELILMDGSGKSIFTMRRRKKLTVADSWRVF   99 (214)
Q Consensus        28 ~~~~~~l~V~~k~~~~sg~~f~V~D~~G~~vf~V~g~~-s~~~~~~l~D~~G~~L~~ir~~k~ls~~~~w~v~   99 (214)
                      ...++++.|.=+.++. |+.|+|+|+.|.+++.++.+. ++..+..+.|++|+ ++.+|+ |..-++++|++-
T Consensus        26 ~dgE~af~VeGs~f~i-~dtlti~Da~G~~l~~i~~kll~l~~~yeI~d~~g~-~~~vrK-K~tf~Rdk~e~d   95 (159)
T COG4894          26 RDGEEAFKVEGSFFSI-GDTLTITDASGKTLVSIEQKLLSLLPRYEISDGGGT-VCEVRK-KVTFSRDKFEID   95 (159)
T ss_pred             CCCcEEEEEeeeEEee-CceEEEEecCCCChHHHHHHHhhccceeEEEcCCCC-EEEEEE-EEEEEeeeEEEc
Confidence            6778999998766666 888999999999999999998 99999999999999 899999 877668888764

>PF04525 Tub_2: Tubby C 2; InterPro: IPR007612 This is a family of plant and bacterial uncharacterised proteins

Probab=97.72  E-value=0.00015  Score=59.70  Aligned_cols=73  Identities=27%  Similarity=0.375  Sum_probs=43.2

Q ss_pred             CCCceEEEEEEE-EeeeEeCCCEEEEeCCCCEEEEEEeec-CCCCeEEEEcCCCC----eEEEEEeee-cccccceeEEE
Q 039555           27 DEGECTSLTVWR-KSLVICCNGFTVIDSHGNLVYRVDNYV-GSCHELILMDGSGK----SIFTMRRRK-KLTVADSWRVF   99 (214)
Q Consensus        27 ~~~~~~~l~V~~-k~~~~sg~~f~V~D~~G~~vf~V~g~~-s~~~~~~l~D~~G~----~L~~ir~~k-~ls~~~~w~v~   99 (214)
                      |+.....|+|.. +.+++ ++...++|.+|+++++++.+. ++..+..+.++++.    ++++|++ + .+..++.-.+|
T Consensus        34 D~~G~~vf~V~g~~~~s~-~~~~~l~D~~G~~L~~i~~k~~~l~~~w~i~~~~~~~~~~~i~tvkk-~~~~~~~~~~~~f  111 (187)
T PF04525_consen   34 DENGNVVFRVDGGKFFSI-GKKRTLMDASGNPLFTIRRKLFSLRPTWEIYRGGGSEGKKPIFTVKK-KSMLQNKDSFDVF  111 (187)
T ss_dssp             ETTS-EEEEEE--SCTTB-TTEEEEE-TTS-EEEEEE--------EEEEEETT---GGGEEEEEE-----------EEEE
T ss_pred             cCCCCEEEEEEEecccCC-CCEEEEECCCCCEEEEEEeeecccceEEEEEECCCCccCceEEEEEE-ecccCCCcceeEE
Confidence            366778999988 55555 789999999999999999986 99999999999998    5999999 6 44555566666


Q ss_pred             eC
Q 039555          100 EG  101 (214)
Q Consensus       100 ~g  101 (214)
                      .+
T Consensus       112 ~~  113 (187)
T PF04525_consen  112 LP  113 (187)
T ss_dssp             ET
T ss_pred             Ee
Confidence            65

; PDB: 1ZXU_A 2Q4M_A.

>KOG0621 consensus Phospholipid scramblase [Cell wall/membrane/envelope biogenesis]

Probab=97.67  E-value=0.0014  Score=58.12  Aligned_cols=181  Identities=15%  Similarity=0.151  Sum_probs=109.4

Q ss_pred             cccCCCCCceEEEEEEEEeeeE----eCCCEEEEeCCCCEEEEEEe-ec---------CCCCeEEEEcCCCCeEEEEEee
Q 039555           22 IKKNIDEGECTSLTVWRKSLVI----CCNGFTVIDSHGNLVYRVDN-YV---------GSCHELILMDGSGKSIFTMRRR   87 (214)
Q Consensus        22 ~~~~~~~~~~~~l~V~~k~~~~----sg~~f~V~D~~G~~vf~V~g-~~---------s~~~~~~l~D~~G~~L~~ir~~   87 (214)
                      +.|-...+........+....+    +.+.|.|.|.+|+.+|.+-- +.         ..+-...++|.-|++++++++ 
T Consensus        71 l~~L~~~~~~~V~q~~E~~ei~tG~et~NRY~v~~~~g~~v~~~~E~S~~~~Rq~~g~~RpF~~~i~D~~g~eVl~~~R-  149 (292)
T KOG0621|consen   71 LEYLAHLDSLMVVQQIEPLEIFTGFETANRYVVHDMYGQPLYYAMERSNVFARQYLGTHRPFAMRIMDNFGQEVLTCKR-  149 (292)
T ss_pred             hheeecCCceEEEEeeeehhhhccCccCcEEEEEcCCcChhHHHHhhchHHHHHhhccCCcceeEeecccCcEEEEEec-
Confidence            3344344455555555555333    26899999999999885522 11         345577899999999999999 


Q ss_pred             ecccccceeEEEeCCcc-hhhhcccCCCCceEEEEeeeccCCccEEEEEEeccCCCCCceeEEEEee-------eCCccE
Q 039555           88 KKLTVADSWRVFEGEVD-ECSRRKKLSKRPVCYVKKHMMSINSNVLAYVYYGGASSNKRYAYTVEGS-------YANRSC  159 (214)
Q Consensus        88 k~ls~~~~w~v~~g~~~-~~~~~~~~~~~~lf~vkk~~~~~k~~~~~~V~~~~~~~~~~~~~~v~G~-------~~~~~~  159 (214)
                      .......   .+.+-.. +-.+ +.-....+-+|.+...+..+  +++|.-.    ....-+.|+|-       +-+..+
T Consensus       150 ~~~c~~~---~c~~~~~~~~~v-~~p~~~~lG~v~q~~~~~~~--~f~i~~~----~~~~v~~v~gp~~~~~~~~~d~~f  219 (292)
T KOG0621|consen  150 PFPCCSS---ACALCLAQEIEI-QSPPMGLLGKVLQTWGCVNP--NFHLWDR----DGNLVFLVEGPRCCTFACCDDTVF  219 (292)
T ss_pred             ccccccc---ccccccccEEEE-EcCCCceEEEEEEeeccccc--eEEEEcc----cceeEEEEEcCceeEEEeecCcce
Confidence            7543332   1111100 0000 00113455556655555566  5555532    22344667666       344444


Q ss_pred             EE-EeCCCcEEEEEEeeeeccC-CeeeeeceEEEEEeCCCCH---HHHHHHHHHhcccc
Q 039555          160 KV-LDESRRVVAEIKRKKAAIG-GVSFGVEVFLLIVHPSFDA---AFAMALVLLLDQMF  213 (214)
Q Consensus       160 ~I-~~~~g~~VAeV~rk~~~~~-~~~~g~dtY~l~V~pgvD~---ali~alvv~lD~i~  213 (214)
                      .| ...+|+.|++|.|+|.... +.+-+.|+|.|.-.-..|.   ++++|.++-||.++
T Consensus       220 ~~~~~d~~~~vg~I~k~w~g~~rE~fTDad~f~v~FPldLdvk~kavllga~flID~~~  278 (292)
T KOG0621|consen  220 FPKTTDNGRIVGSISRKWAGLVREAFTDADTFVVHFPLDLDVKLKALLLGSTFLIDYMS  278 (292)
T ss_pred             eEEEcCCCeEEEEEeecccchhhhheeccceeeEecCCcCCHHHHhhhhhheeeEEEEE
Confidence            44 4456899999999997753 4455678888888767764   68888888888664

>PF03803 Scramblase: Scramblase ; InterPro: IPR005552 Scramblase is palmitoylated and contains a potential protein kinase C phosphorylation site

Probab=96.63  E-value=0.022  Score=47.89  Aligned_cols=99  Identities=11%  Similarity=0.089  Sum_probs=69.6

Q ss_pred             CCceEEEEEEEEeeeEe------CCC--EEEEeCCCCEEEEEEeecC-------CCCeEEEEcCCCCeEEEEEeeecccc
Q 039555           28 EGECTSLTVWRKSLVIC------CNG--FTVIDSHGNLVYRVDNYVG-------SCHELILMDGSGKSIFTMRRRKKLTV   92 (214)
Q Consensus        28 ~~~~~~l~V~~k~~~~s------g~~--f~V~D~~G~~vf~V~g~~s-------~~~~~~l~D~~G~~L~~ir~~k~ls~   92 (214)
                      +..+..+.+.+.+-.+.      ...  ..|+|.+|+.+++++-..+       ...+..+.++.|++|-+|++ +.-.+
T Consensus        50 ~~g~~i~~~~E~s~~~~R~~~~~~R~f~~~i~D~~g~~vl~i~Rp~~c~~C~~~~~~~~~V~~p~g~~iG~I~q-~~~~~  128 (221)
T PF03803_consen   50 PNGQQIYYAVEESDCCSRQCCGSHRPFKMHIYDNYGREVLTIERPFKCCSCCPCCLQEMEVESPPGNLIGSIRQ-PFSCC  128 (221)
T ss_pred             CCCCEEEEEEEeCcceeeeecCCCCCEEEEEEecCCCEEEEEEcCCcceecccccceeEEEecCCCcEEEEEEE-cCccc
Confidence            45556666666642221      123  4689999999999998762       23677888999999999999 76667


Q ss_pred             cceeEEEeCCcchhhhcccCCCCceEEEEeeeccC--CccEEEEEEec
Q 039555           93 ADSWRVFEGEVDECSRRKKLSKRPVCYVKKHMMSI--NSNVLAYVYYG  138 (214)
Q Consensus        93 ~~~w~v~~g~~~~~~~~~~~~~~~lf~vkk~~~~~--k~~~~~~V~~~  138 (214)
                      .++++|+..+           ++++++|+.+....  -..+.+.|...
T Consensus       129 ~~~f~I~d~~-----------~~~~~~I~gp~~~~~~~~~~~F~I~~~  165 (221)
T PF03803_consen  129 RPNFDIFDAN-----------GNPIFTIKGPCCCCSCCCDWEFEIKDP  165 (221)
T ss_pred             ceEEEEEECC-----------CceEEEEeCCcceeccccceeeeeecc
Confidence            9999999976           46888998775421  12346777653

Scramblase exhibits Ca2+-activated phospholipid scrambling activity in vitro. There are also possible SH3 and WW binding motifs. Scramblase is involved in the redistribution of phospholipids after cell activation or injury [].

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	214
1zxu_A	217	X-Ray Structure Of Protein From Arabidopsis Thalian		1e-15

>pdb|1ZXU|A Chain A, X-Ray Structure Of Protein From Arabidopsis Thaliana At5g01750 Length = 217

Iteration: 1
 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 55/177 (31%), Positives = 87/177 (49%), Gaps = 12/177 (6%)
Query: 38  RKSLVICCNGFTVIDSHGNLVYRVDNYVGSCHE-LILMDGSGKSIFTMRRRKKLTVADSW 96
           RK   +    F + D +GNL+++V   V   H+  +L+DGSG  + T+R  K ++  D W
Sbjct: 44  RKXXSLTDGNFVITDVNGNLLFKVKEPVFGLHDKRVLLDGSGTPVVTLRE-KXVSXHDRW 102
Query: 97  RVFEGEVDECSRRKKLSKRPVCYVKKHMMSINSNVLAYVYYGGASSNKRYAYTVEGSYAN 156
           +VF G            +R + Y  K    +       V+ G     KR  + V+GS+  
Sbjct: 103 QVFRG--------GSTDQRDLLYTVKRSSXLQLKTKLDVFLGHNKDEKRCDFRVKGSWLE 154
Query: 157 RSCKVL-DESRRVVAEIKRKKAAIGGVSFGVEVFLLIVHPSFDAAFAMALVLLLDQM 212
           RSC V   ES  +VA+  RK   +  V  G + F + V+P+ D AF  +LV++LD +
Sbjct: 155 RSCVVYAGESDAIVAQXHRKH-TVQSVFLGKDNFSVTVYPNVDYAFIASLVVILDDV 210
  Database: pdbaa

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	214
1zxu_A	217	AT5G01750 protein; PFAM PF01167, TULP, structural	2e-44

>1zxu_A AT5G01750 protein; PFAM PF01167, TULP, structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 1.70A {Arabidopsis thaliana} SCOP: d.23.1.2 PDB: 2q4m_A Length = 217

 Score =  146 bits (370), Expect = 2e-44
 Identities = 55/206 (26%), Positives = 96/206 (46%), Gaps = 12/206 (5%)

Query: 10  RSVHQEEPEPALIKKNIDEGECTSLTVWRKSLVICCNGFTVIDSHGNLVYRVDNYVGSCH 69
                 +    ++           + + RK + +    F + D +GNL+++V   V   H
Sbjct: 16  SGAPTPQAGGVVVDPKYCAPYPIDMAIVRKMMSLTDGNFVITDVNGNLLFKVKEPVFGLH 75

Query: 70  -ELILMDGSGKSIFTMRRRKKLTVADSWRVFEGEVDECSRRKKLSKRPVCYVKKHMMSIN 128
            + +L+DGSG  + T+R +  +++ D W+VF G   +        +  +  VK+  M   
Sbjct: 76  DKRVLLDGSGTPVVTLREKM-VSMHDRWQVFRGGSTD-------QRDLLYTVKRSSMLQL 127

Query: 129 SNVLAYVYYGGASSNKRYAYTVEGSYANRSCKVLD-ESRRVVAEIKRKKAAIGGVSFGVE 187
              L  V+ G     KR  + V+GS+  RSC V   ES  +VA++ RK      V  G +
Sbjct: 128 KTKLD-VFLGHNKDEKRCDFRVKGSWLERSCVVYAGESDAIVAQMHRKHTV-QSVFLGKD 185

Query: 188 VFLLIVHPSFDAAFAMALVLLLDQMF 213
            F + V+P+ D AF  +LV++LD + 
Sbjct: 186 NFSVTVYPNVDYAFIASLVVILDDVN 211

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	214
1zxu_A	217	AT5G01750 protein; PFAM PF01167, TULP, structural	100.0
1zxu_A	217	AT5G01750 protein; PFAM PF01167, TULP, structural	97.86

>1zxu_A AT5G01750 protein; PFAM PF01167, TULP, structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 1.70A {Arabidopsis thaliana} SCOP: d.23.1.2 PDB: 2q4m_A

Probab=100.00  E-value=2.2e-39  Score=272.21  Aligned_cols=179  Identities=30%  Similarity=0.528  Sum_probs=139.1

Q ss_pred             ccCCCCCceEEEEEEEEeeeEeCCCEEEEeCCCCEEEEEEeec-CCCCeEEEEcCCCCeEEEEEeeecccccceeEEEeC
Q 039555           23 KKNIDEGECTSLTVWRKSLVICCNGFTVIDSHGNLVYRVDNYV-GSCHELILMDGSGKSIFTMRRRKKLTVADSWRVFEG  101 (214)
Q Consensus        23 ~~~~~~~~~~~l~V~~k~~~~sg~~f~V~D~~G~~vf~V~g~~-s~~~~~~l~D~~G~~L~~ir~~k~ls~~~~w~v~~g  101 (214)
                      +||  ++.+++|+||+|.+++++++|+|+|++|+++|+|+|+. +++.++.|+|++|++|++|++ |.++++++|++|.+
T Consensus        31 ~~~--~~~~~~l~vkqk~~~~~~~~f~V~D~~G~~vf~V~~~~~~~~~~~~l~D~~G~~l~~i~r-k~~~~~~~~~v~~~  107 (217)
T 1zxu_A           31 KYC--APYPIDMAIVRKMMSLTDGNFVITDVNGNLLFKVKEPVFGLHDKRVLLDGSGTPVVTLRE-KMVSMHDRWQVFRG  107 (217)
T ss_dssp             GGB--CSSCEEEEEECC-----CCCEEEEETTSCEEEEEECSSTTCCSEEEEECTTSCEEEEEEC-------CEEEEEET
T ss_pred             ccc--CCCCcEEEEEEEEeEeeCCCEEEEeCCCCEEEEEEccccCCCCEEEEECCCCCEEEEEEc-cccccCcEEEEEcC
Confidence            677  78999999999999999999999999999999999997 999999999999999999999 99999999999998


Q ss_pred             CcchhhhcccCCCCceEEEEeeecc-CCccEEEEEEeccCCCCCceeEEEEeeeCCccEEEEeCC-CcEEEEEEeeeecc
Q 039555          102 EVDECSRRKKLSKRPVCYVKKHMMS-INSNVLAYVYYGGASSNKRYAYTVEGSYANRSCKVLDES-RRVVAEIKRKKAAI  179 (214)
Q Consensus       102 ~~~~~~~~~~~~~~~lf~vkk~~~~-~k~~~~~~V~~~~~~~~~~~~~~v~G~~~~~~~~I~~~~-g~~VAeV~rk~~~~  179 (214)
                      ++.       +.++++|+|++++.+ +++  +++|+.+++++++.+.|+|+|+|++++|+|++++ |++||+|+|++. .
T Consensus       108 ~~~-------~~~~~i~~vrk~~~~~~~~--~~~V~~~~~~~~~~~~~~I~G~~~~~~f~I~~~~~~~~Va~I~kk~~-~  177 (217)
T 1zxu_A          108 GST-------DQRDLLYTVKRSSMLQLKT--KLDVFLGHNKDEKRCDFRVKGSWLERSCVVYAGESDAIVAQMHRKHT-V  177 (217)
T ss_dssp             TCC-------CGGGEEEEEEC-------C--CEEEEETTCCC-CCCSEEEESCTTTTCCEEEETTTCCEEEEEEEC----
T ss_pred             CCC-------CCCcEEEEEEEeccccCCC--eEEEEECCCCCCCceEEEEEEeEeCCEEEEEECCCCEEEEEEEeeee-c
Confidence            732       123589999998423 677  6788887655555688999999999999999986 799999999954 4


Q ss_pred             CCeeeeeceEEEEEeCCCCHHHHHHHHHHhccccC
Q 039555          180 GGVSFGVEVFLLIVHPSFDAAFAMALVLLLDQMFS  214 (214)
Q Consensus       180 ~~~~~g~dtY~l~V~pgvD~ali~alvv~lD~i~~  214 (214)
                      +++++++|+|.|+|.||+|.+|+||+|++||+|++
T Consensus       178 ~~~~~~~D~y~l~V~p~~D~aliialvv~iD~~~~  212 (217)
T 1zxu_A          178 QSVFLGKDNFSVTVYPNVDYAFIASLVVILDDVNR  212 (217)
T ss_dssp             -----CBCSEEEEECTTSBHHHHHHHHHHHHHHHC
T ss_pred             cccccCCcEEEEEECCCCCHHHHHHHHHHHHHhhh
Confidence            57888999999999999999999999999999864

>1zxu_A AT5G01750 protein; PFAM PF01167, TULP, structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 1.70A {Arabidopsis thaliana} SCOP: d.23.1.2 PDB: 2q4m_A

Probab=97.86  E-value=0.00023  Score=58.82  Aligned_cols=98  Identities=17%  Similarity=0.328  Sum_probs=66.6

Q ss_pred             CCCCEEEEEEeec-CCCC-eEEEEcCCCCeEEEEEeeecccccceeEEEeCCcchhhhcccCCCCceEEEEeeeccCCcc
Q 039555           53 SHGNLVYRVDNYV-GSCH-ELILMDGSGKSIFTMRRRKKLTVADSWRVFEGEVDECSRRKKLSKRPVCYVKKHMMSINSN  130 (214)
Q Consensus        53 ~~G~~vf~V~g~~-s~~~-~~~l~D~~G~~L~~ir~~k~ls~~~~w~v~~g~~~~~~~~~~~~~~~lf~vkk~~~~~k~~  130 (214)
                      +.+...|.|+-+. ++.. +..++|.+|+.++++.. +.+++..+..++...           ++++++|+++...+.+ 
T Consensus        34 ~~~~~~l~vkqk~~~~~~~~f~V~D~~G~~vf~V~~-~~~~~~~~~~l~D~~-----------G~~l~~i~rk~~~~~~-  100 (217)
T 1zxu_A           34 APYPIDMAIVRKMMSLTDGNFVITDVNGNLLFKVKE-PVFGLHDKRVLLDGS-----------GTPVVTLREKMVSMHD-  100 (217)
T ss_dssp             CSSCEEEEEECC-----CCCEEEEETTSCEEEEEEC-SSTTCCSEEEEECTT-----------SCEEEEEEC------C-
T ss_pred             CCCCcEEEEEEEEeEeeCCCEEEEeCCCCEEEEEEc-cccCCCCEEEEECCC-----------CCEEEEEEccccccCc-
Confidence            4689999999987 6666 99999999999999999 888888888888865           5899999997654567 


Q ss_pred             EEEEEEeccCCCCCceeEEEEee--e-CCccEEEEeC
Q 039555          131 VLAYVYYGGASSNKRYAYTVEGS--Y-ANRSCKVLDE  164 (214)
Q Consensus       131 ~~~~V~~~~~~~~~~~~~~v~G~--~-~~~~~~I~~~  164 (214)
                       +++|+.+....++.+-++|+-.  + ++..|.|..+
T Consensus       101 -~~~v~~~~~~~~~~~i~~vrk~~~~~~~~~~~V~~~  136 (217)
T 1zxu_A          101 -RWQVFRGGSTDQRDLLYTVKRSSMLQLKTKLDVFLG  136 (217)
T ss_dssp             -EEEEEETTCCCGGGEEEEEEC-------CCEEEEET
T ss_pred             -EEEEEcCCCCCCCcEEEEEEEeccccCCCeEEEEEC
Confidence             7788875321112345677644  3 4567888875

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	214
d2q4ma1	189	d.23.1.2 (A:24-212) Hypothetical protein At5g01750	5e-44

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	214
d2q4ma1	189	Hypothetical protein At5g01750 {Thale cress (Arabi	100.0
d2q4ma1	189	Hypothetical protein At5g01750 {Thale cress (Arabi	97.9