Citrus Sinensis ID: 039593

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140----
Protein Sequence
MGSYIFCVICILYSLISITCGSSIMFYLKEMYVIGHGVETAQKLTGSTPHDQLLIQISNSFAGLLLFVVGFLLFMVAFVKDAEFQSFFAKGCMLVHVSMALWRVVFERRLADLAWDWPRQVVGDLALALSWVFFLVYSWREKYD
Secondary Structure (PSIPRED)
ccccHHHHHHHHHHHHHHHHccEEEEEEEEEEEEcccHHHHHHHHccccccHHHHEEccHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHcccccc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEccccHHHHHHHccccccccEEEEcccHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
MGSYIFCVICILYSLISITCGSSIMFYLKEMYVIGHGVetaqkltgstphdqlLIQISNSFAGLLLFVVGFLLFMVAFVKDAEFQSFFAKGCMLVHVSMALWRVVFERRLADlawdwprqVVGDLALALSWVFFLVYSWREKYD
Flexible Loop (DISEMBL)
MGSYIFCVICILYSLISITCGSSIMFYLKEMYVIGHGVETAQKLTGSTPHDQLLIQISNSFAGLLLFVVGFLLFMVAFVKDAEFQSFFAKGCMLVHVSMALWRVVFERRLADLAWDWPRQVVGDLALALSWVFFLVYSWREKYD
Low Complexity Region (SEG)
MGSYIFCVICILYSLISITCGSSIMFYLKEMYVIGHGVETAQKLTGSTPHDQLLIQISNSfaglllfvvgfllfmvafvKDAEFQSFFAKGCMLVHVSMALWRVVFERRLADLAWDWPRQVVGDLALALSWVFFLVYSWREKYD
Disordered region (IsUnstruct)
***YIFCVICILYSLISITCGSSIMFYLKEMYVIGHGVETAQKLTGSTPHDQLLIQISNSFAGLLLFVVGFLLFMVAFVKDAEFQSFFAKGCMLVHVSMALWRVVFERRLADLAWDWPRQVVGDLALALSWVFFLVYSWR****
Disordered Region (DISOPRED)
***YIFCVICILYSLISITCGSSIMFYLKEMYVIGHGVETAQK*TGSTPHDQLLIQISNSFAGLLLFVVGFLLFMVAFVKDAEFQSFFAKGCMLVHVSMALWRVVFERRLADLAWDWPRQVVGDLALALSWVFFLVYSWREK**
Disordered Region (DISEMBL)
MGSYIFCVICILYSLISITCGSSIMFYLKEMYVIGHGVETAQKLTGSTPHDQLLIQISNSFAGLLLFVVGFLLFMVAFVKDAEFQSFFAKGCMLVHVSMALWRVVFERRLADLAWDWPRQVVGDLALALSWVFFLVYSWREKYD
Disordered Region (DISPRO)
*GSYIFCVICILYSLISITCGSSIMFYLKEMYVIGHGVETAQKLTGSTPHDQLLIQISNSFAGLLLFVVGFLLFMVAFVKDAEFQSFFAKGCMLVHVSMALWRVVFERRLADLAWDWPRQVVGDLALALSWVFFLVYSWREKYD
Transmembrane Helix (TMHMM)
iiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiii
Transmembrane Helix (HMMTOP)
oooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooo
Transmembrane Helix (MEMSAT)
iiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooo
TM Helix, Signal Peptide (Phobius)
iiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MGSYIFCVICILYSLISITCGSSIMFYLKEMYVIGHGVETAQKLTGSTPHDQLLIQISNSFAGLLLFVVGFLLFMVAFVKDAEFQSFFAKGCMLVHVSMALWRVVFERRLADLAWDWPRQVVGDLALALSWVFFLVYSWREKYD
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	144
225446374	144	PREDICTED: uncharacterized protein LOC10	1.0	1.0	0.819	1e-63
224121932	144	predicted protein [Populus trichocarpa]	1.0	1.0	0.777	3e-60
359493847	144	PREDICTED: uncharacterized protein LOC10	1.0	1.0	0.708	1e-55
224128123	144	predicted protein [Populus trichocarpa]	1.0	1.0	0.722	1e-55
225467229	150	PREDICTED: uncharacterized protein LOC10	0.965	0.926	0.733	4e-55
147801862	269	hypothetical protein VITISV_027197 [Viti	0.986	0.527	0.704	5e-55
388507262	145	unknown [Medicago truncatula]	0.993	0.986	0.713	1e-54
351720894	150	uncharacterized protein LOC100305662 pre	0.965	0.926	0.712	1e-53
356555305	148	PREDICTED: uncharacterized protein LOC10	1.0	0.972	0.694	2e-53
357446601	203	hypothetical protein MTR_2g013680 [Medic	0.979	0.694	0.709	8e-53

>gi|225446374|ref|XP_002274155.1| PREDICTED: uncharacterized protein LOC100255813 [Vitis vinifera] gi|302143297|emb|CBI21858.3| unnamed protein product [Vitis vinifera]

 Score =  247 bits (630), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 118/144 (81%), Positives = 131/144 (90%)

Query: 1   MGSYIFCVICILYSLISITCGSSIMFYLKEMYVIGHGVETAQKLTGSTPHDQLLIQISNS 60
           M   +F VICIL+SL+++TCGS IMFYL E+ V+GHG ETA+KL GSTPHDQLLIQIS+S
Sbjct: 1   MAPSLFFVICILHSLVTLTCGSLIMFYLNEISVLGHGTETARKLLGSTPHDQLLIQISDS 60

Query: 61  FAGLLLFVVGFLLFMVAFVKDAEFQSFFAKGCMLVHVSMALWRVVFERRLADLAWDWPRQ 120
           FAGLLLF++GFLLFMVAFVKD EFQSFFAKGC+L+HVSMALWRV FERRL DLAWDWPRQ
Sbjct: 61  FAGLLLFMIGFLLFMVAFVKDREFQSFFAKGCVLLHVSMALWRVCFERRLEDLAWDWPRQ 120

Query: 121 VVGDLALALSWVFFLVYSWREKYD 144
           V GDLALALSWVFFLVYSWREKYD
Sbjct: 121 VAGDLALALSWVFFLVYSWREKYD 144

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224121932|ref|XP_002330689.1| predicted protein [Populus trichocarpa] gi|222872293|gb|EEF09424.1| predicted protein [Populus trichocarpa]

 Score =  236 bits (601), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 112/144 (77%), Positives = 127/144 (88%)

Query: 1   MGSYIFCVICILYSLISITCGSSIMFYLKEMYVIGHGVETAQKLTGSTPHDQLLIQISNS 60
           M S +F +ICIL+S I+IT GS IMFYLKE+ V+GHG ETAQKL GSTPHDQLLIQISNS
Sbjct: 1   MASSMFFIICILHSTIAITLGSLIMFYLKEISVVGHGTETAQKLLGSTPHDQLLIQISNS 60

Query: 61  FAGLLLFVVGFLLFMVAFVKDAEFQSFFAKGCMLVHVSMALWRVVFERRLADLAWDWPRQ 120
           FAGLLLFVVGFL+FMVAFVKD EFQ+FFAKGC L++V MALWR  FERR+ DLAWDWP+Q
Sbjct: 61  FAGLLLFVVGFLVFMVAFVKDREFQNFFAKGCALLYVVMALWRFYFERRVEDLAWDWPKQ 120

Query: 121 VVGDLALALSWVFFLVYSWREKYD 144
           VVGD  +ALSWVFFL+Y+WREKYD
Sbjct: 121 VVGDFVMALSWVFFLLYTWREKYD 144

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359493847|ref|XP_003634678.1| PREDICTED: uncharacterized protein LOC100260596 [Vitis vinifera]

 Score =  221 bits (562), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 102/144 (70%), Positives = 123/144 (85%)

Query: 1   MGSYIFCVICILYSLISITCGSSIMFYLKEMYVIGHGVETAQKLTGSTPHDQLLIQISNS 60
           MGS  F + C L+S+I++TCG+ +MFY  E++V GHG E A+KL GSTPHDQLLI+ S+S
Sbjct: 1   MGSAAFFLTCSLHSVIALTCGALMMFYTNEIFVFGHGPEIARKLQGSTPHDQLLIRTSDS 60

Query: 61  FAGLLLFVVGFLLFMVAFVKDAEFQSFFAKGCMLVHVSMALWRVVFERRLADLAWDWPRQ 120
           F+GLLLF +GFLLFMVAFVKD EFQSFFAKGC+ +HV MALWR+ FER+L DLAWDWP+Q
Sbjct: 61  FSGLLLFAIGFLLFMVAFVKDREFQSFFAKGCVTLHVFMALWRIYFERKLEDLAWDWPKQ 120

Query: 121 VVGDLALALSWVFFLVYSWREKYD 144
           VVGD+ LALSWVF +VYSWREKYD
Sbjct: 121 VVGDIVLALSWVFLVVYSWREKYD 144

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224128123|ref|XP_002329087.1| predicted protein [Populus trichocarpa] gi|222869756|gb|EEF06887.1| predicted protein [Populus trichocarpa]

 Score =  221 bits (562), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 104/144 (72%), Positives = 123/144 (85%)

Query: 1   MGSYIFCVICILYSLISITCGSSIMFYLKEMYVIGHGVETAQKLTGSTPHDQLLIQISNS 60
           MGS  F +IC+L+S++++TCG+ +MFY  E  V GHG+E A KL GSTPHDQLL+Q S+S
Sbjct: 1   MGSSGFFLICMLHSVMALTCGALMMFYTNEATVFGHGIEIATKLKGSTPHDQLLVQTSDS 60

Query: 61  FAGLLLFVVGFLLFMVAFVKDAEFQSFFAKGCMLVHVSMALWRVVFERRLADLAWDWPRQ 120
           F+GLLLF +GFLLFMVAFVKD EFQSFFAKGC+L+HVSMA WR+ FER+L DLA D PR 
Sbjct: 61  FSGLLLFAIGFLLFMVAFVKDREFQSFFAKGCVLLHVSMAFWRIYFERKLEDLARDLPRL 120

Query: 121 VVGDLALALSWVFFLVYSWREKYD 144
           VVGD+ALALSWVFFLVYSWREKYD
Sbjct: 121 VVGDIALALSWVFFLVYSWREKYD 144

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225467229|ref|XP_002263054.1| PREDICTED: uncharacterized protein LOC100256771 [Vitis vinifera] gi|297735997|emb|CBI23971.3| unnamed protein product [Vitis vinifera]

 Score =  219 bits (557), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 102/139 (73%), Positives = 122/139 (87%)

Query: 6   FCVICILYSLISITCGSSIMFYLKEMYVIGHGVETAQKLTGSTPHDQLLIQISNSFAGLL 65
           F VIC+L+S+I++TCG  +MFY+KE+Y  GHG ETA KL GSTPHDQLLI+ S+SF+GLL
Sbjct: 12  FFVICLLHSIIALTCGGLMMFYMKEIYEFGHGPETATKLLGSTPHDQLLIRTSDSFSGLL 71

Query: 66  LFVVGFLLFMVAFVKDAEFQSFFAKGCMLVHVSMALWRVVFERRLADLAWDWPRQVVGDL 125
           LF +GFLLFMVAFV+D +FQSFFAKGC+++HVSMALWR  FERR+ DLA DW RQ+VGD+
Sbjct: 72  LFAIGFLLFMVAFVRDRDFQSFFAKGCIVLHVSMALWRFYFERRVEDLALDWLRQIVGDI 131

Query: 126 ALALSWVFFLVYSWREKYD 144
            LALSWVFFLVYSWREKYD
Sbjct: 132 LLALSWVFFLVYSWREKYD 150

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147801862|emb|CAN74977.1| hypothetical protein VITISV_027197 [Vitis vinifera]

 Score =  218 bits (556), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 100/142 (70%), Positives = 121/142 (85%)

Query: 1   MGSYIFCVICILYSLISITCGSSIMFYLKEMYVIGHGVETAQKLTGSTPHDQLLIQISNS 60
           MGS  F + CIL+S+I++TCG+ +MFY  E++V GHG E A+KL GSTPHDQLLI+ S+S
Sbjct: 1   MGSAAFFLTCILHSVIALTCGALMMFYTNEIFVFGHGPEIARKLQGSTPHDQLLIRTSDS 60

Query: 61  FAGLLLFVVGFLLFMVAFVKDAEFQSFFAKGCMLVHVSMALWRVVFERRLADLAWDWPRQ 120
           F+GLLLF +GFLLFMVAFVKD EFQSFFAKGC+ +HV MALWR+ FER+L DLAWDWP+Q
Sbjct: 61  FSGLLLFAIGFLLFMVAFVKDREFQSFFAKGCVTLHVFMALWRIYFERKLEDLAWDWPKQ 120

Query: 121 VVGDLALALSWVFFLVYSWREK 142
           VVGD+ LALSWVF +VYSWRE 
Sbjct: 121 VVGDIVLALSWVFLVVYSWREN 142

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388507262|gb|AFK41697.1| unknown [Medicago truncatula]

 Score =  217 bits (552), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 102/143 (71%), Positives = 121/143 (84%)

Query: 2   GSYIFCVICILYSLISITCGSSIMFYLKEMYVIGHGVETAQKLTGSTPHDQLLIQISNSF 61
            S  F VICIL+S+I+IT G+ +MFY+KE+Y  GHGV+TA KL GSTPHDQLLI+ S+SF
Sbjct: 3   SSSAFFVICILHSIIAITSGALMMFYMKEVYTFGHGVQTATKLLGSTPHDQLLIKTSDSF 62

Query: 62  AGLLLFVVGFLLFMVAFVKDAEFQSFFAKGCMLVHVSMALWRVVFERRLADLAWDWPRQV 121
           +GLLL  +GFLLFMV+FVKD +FQ FFAKGC L+HV MALWR+ FER++ DLAWDW RQ 
Sbjct: 63  SGLLLVAIGFLLFMVSFVKDRDFQHFFAKGCFLLHVFMALWRIYFERKVEDLAWDWLRQT 122

Query: 122 VGDLALALSWVFFLVYSWREKYD 144
           VGD+ LALSWVFFLVYSWREKYD
Sbjct: 123 VGDVLLALSWVFFLVYSWREKYD 145

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351720894|ref|NP_001238727.1| uncharacterized protein LOC100305662 precursor [Glycine max] gi|255626237|gb|ACU13463.1| unknown [Glycine max]

 Score =  213 bits (543), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 99/139 (71%), Positives = 117/139 (84%)

Query: 6   FCVICILYSLISITCGSSIMFYLKEMYVIGHGVETAQKLTGSTPHDQLLIQISNSFAGLL 65
           F VICIL+SLI++TCG  +MFY+KE+Y  GHGV+ A KL GSTPHDQLLI+ S+SF+GLL
Sbjct: 12  FLVICILHSLIAVTCGGLMMFYMKEVYTFGHGVQAATKLLGSTPHDQLLIKTSDSFSGLL 71

Query: 66  LFVVGFLLFMVAFVKDAEFQSFFAKGCMLVHVSMALWRVVFERRLADLAWDWPRQVVGDL 125
           L  +GFLLFM +FVKD +FQ FFAKGC L+H+ MA+WRV FER++ DLAWDW RQ VGD 
Sbjct: 72  LVAIGFLLFMASFVKDRDFQVFFAKGCTLLHLFMAMWRVYFERKVEDLAWDWLRQTVGDF 131

Query: 126 ALALSWVFFLVYSWREKYD 144
            LALSWVFFLVYSWREKYD
Sbjct: 132 LLALSWVFFLVYSWREKYD 150

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356555305|ref|XP_003545974.1| PREDICTED: uncharacterized protein LOC100527898 [Glycine max]

 Score =  213 bits (542), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 100/144 (69%), Positives = 120/144 (83%)

Query: 1   MGSYIFCVICILYSLISITCGSSIMFYLKEMYVIGHGVETAQKLTGSTPHDQLLIQISNS 60
           M S  F VICIL+S+I++TCG+ +MFY+KE+Y  GHGV+ A KL GSTPHDQLLI+ S+S
Sbjct: 5   MASSAFMVICILHSVIAMTCGALMMFYMKEVYTFGHGVQAATKLLGSTPHDQLLIKTSDS 64

Query: 61  FAGLLLFVVGFLLFMVAFVKDAEFQSFFAKGCMLVHVSMALWRVVFERRLADLAWDWPRQ 120
           F+GLLL  +GFLLFMV+FVKD +FQ FFAKGC L+H+ MA+WRV FER++ DLA DW RQ
Sbjct: 65  FSGLLLVAIGFLLFMVSFVKDRDFQVFFAKGCTLLHLFMAMWRVYFERKVEDLALDWLRQ 124

Query: 121 VVGDLALALSWVFFLVYSWREKYD 144
            VGD  LALSWVFFLVYSWREKYD
Sbjct: 125 TVGDFLLALSWVFFLVYSWREKYD 148

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357446601|ref|XP_003593576.1| hypothetical protein MTR_2g013680 [Medicago truncatula] gi|355482624|gb|AES63827.1| hypothetical protein MTR_2g013680 [Medicago truncatula]

 Score =  211 bits (537), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 100/141 (70%), Positives = 119/141 (84%)

Query: 2   GSYIFCVICILYSLISITCGSSIMFYLKEMYVIGHGVETAQKLTGSTPHDQLLIQISNSF 61
            S  F VICIL+S+I+IT G+ +MFY+KE+Y  GHGV+TA KL GSTPHDQLLI+ S+SF
Sbjct: 3   SSSAFFVICILHSIIAITSGALMMFYMKEVYTFGHGVQTATKLLGSTPHDQLLIKTSDSF 62

Query: 62  AGLLLFVVGFLLFMVAFVKDAEFQSFFAKGCMLVHVSMALWRVVFERRLADLAWDWPRQV 121
           +GLLL  +GFLLFMV+FVKD +FQ FFAKGC L+HV MALWR+ FER++ DLAWDW RQ 
Sbjct: 63  SGLLLVAIGFLLFMVSFVKDRDFQHFFAKGCFLLHVFMALWRIYFERKVEDLAWDWLRQT 122

Query: 122 VGDLALALSWVFFLVYSWREK 142
           VGD+ LALSWVFFLVYSWREK
Sbjct: 123 VGDVLLALSWVFFLVYSWREK 143

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	144
TAIR|locus:505006180	150	AT1G53035 "AT1G53035" [Arabido	1.0	0.96	0.527	5.5e-38
TAIR|locus:1006230226	144	AT3G15358 "AT3G15358" [Arabido	1.0	1.0	0.520	1.1e-37

TAIR|locus:505006180 AT1G53035 "AT1G53035" [Arabidopsis thaliana (taxid:3702)]

 Score = 407 (148.3 bits), Expect = 5.5e-38, P = 5.5e-38
 Identities = 76/144 (52%), Positives = 101/144 (70%)

Query:     1 MGSYIFCVICILYSLISITCGSSIMFYLKEMYVIGHGVETAQKLTGSTPHDQLLIQISNS 60
             M   +F VICIL+S+I++T G+ +MFY ++  + G G E A KL GSTPHD+LLIQIS S
Sbjct:     7 MNPSLFRVICILHSIIALTSGTLMMFYTEKASIFGPGSEIASKLKGSTPHDELLIQISQS 66

Query:    61 XXXXXXXXXXXXXXXXXXXKDAEFQSFFAKGCMLVHVSMALWRVVFERRLADLAWDWPRQ 120
                                KD EF SFFA G ++++V MA+WRV+FE ++ DLA++WP+Q
Sbjct:    67 FSGLLLFAIGLVLFMVSFVKDKEFHSFFAGGSVILYVLMAMWRVLFEWKIEDLAYEWPKQ 126

Query:   121 VVGDLALALSWVFFLVYSWREKYD 144
              +GD+ALA+SWVFFLVYSWREKYD
Sbjct:   127 ALGDIALAISWVFFLVYSWREKYD 150

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0007623 "circadian rhythm" evidence=RCA

TAIR|locus:1006230226 AT3G15358 "AT3G15358" [Arabidopsis thaliana (taxid:3702)]

 Score = 404 (147.3 bits), Expect = 1.1e-37, P = 1.1e-37
 Identities = 75/144 (52%), Positives = 102/144 (70%)

Query:     1 MGSYIFCVICILYSLISITCGSSIMFYLKEMYVIGHGVETAQKLTGSTPHDQLLIQISNS 60
             M SY+F VICIL+S+I++T G+ +MFY ++  + GHG + A KL GSTPHD+ LIQIS S
Sbjct:     1 MNSYLFRVICILHSIIALTSGTLMMFYTEKASIFGHGSDIANKLKGSTPHDEQLIQISQS 60

Query:    61 XXXXXXXXXXXXXXXXXXXKDAEFQSFFAKGCMLVHVSMALWRVVFERRLADLAWDWPRQ 120
                                KD EF SFFA G +++++ MALWRV+FE ++ DLA++ P+Q
Sbjct:    61 FSGLLLFAIGLVLFMVSFVKDREFHSFFAAGSVILYMVMALWRVMFEWKIEDLAFECPKQ 120

Query:   121 VVGDLALALSWVFFLVYSWREKYD 144
              +GD+ALA+SWVFFLVY+WREKYD
Sbjct:   121 ALGDIALAVSWVFFLVYTWREKYD 144


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.329   0.140   0.459    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      144       125   0.00091  102 3  11 22  0.41    30
                                                     29  0.39    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  589 (63 KB)
  Total size of DFA:  147 KB (2089 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  9.90u 0.23s 10.13t   Elapsed:  00:00:00
  Total cpu time:  9.90u 0.23s 10.13t   Elapsed:  00:00:01
  Start:  Sat May 11 08:07:58 2013   End:  Sat May 11 08:07:59 2013

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00018592001 SubName- Full=Chromosome chr12 scaffold_18, whole genome shotgun sequence; (144 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	144
PF11169	103	DUF2956: Protein of unknown function (DUF2956); In	84.18

>PF11169 DUF2956: Protein of unknown function (DUF2956); InterPro: IPR021339 This family of proteins with unknown function appears to be restricted to Gammaproteobacteria

Probab=84.18  E-value=0.72  Score=35.03  Aligned_cols=15  Identities=40%  Similarity=0.806  Sum_probs=13.2

Q ss_pred             HHHHHHHHHHhhhhc
Q 039593          125 LALALSWVFFLVYSW  139 (144)
Q Consensus       125 i~lalSWvffLvysw  139 (144)
                      ++|++||+.|.+|-+
T Consensus        88 ~LL~lSW~gF~~Y~~  102 (103)
T PF11169_consen   88 GLLVLSWIGFIAYIF  102 (103)
T ss_pred             HHHHHHHHHHHHHHH
Confidence            489999999999964

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00