Citrus Sinensis ID: 039724

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-
Protein Sequence
MASSQTQEPCAPDHENLGMMKERIQRGQWIRAAILGANDGLLSTTSLMLGVGAAKEDRRSMVLSGLAGALAGACSMAVGEFVSVSTQRDIQKATTSTNCERVMKLDITSVKETKLHETEPKLPTIFSPGRSPMMKVVIEDAKTFPSSSELRDDLQEVLPNPFKAAAASALAFLCGSFVPLLPAILFARYIVRIVVIAIVTSLALVLFGGFGAHLGGSPIRVSAVRVLVGGWIAMGVTYGLLKPFDSEGRND
Secondary Structure (PSIPRED)
cccccccccccccccccccHHHHHHccHHHHHHHHHccccHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHcccccccccccccHHHHHcHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccHHHHHHHHHHHHHHHcccccEEEEHHEHHHHHcccccHHHHHHHHHHHHHHHHHHHHcccEEEEccccHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHccHHHHHHHHHccccccHHcccHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccc
Coil and Loop (DISEMBL)
massqtqepcapdhenlgMMKERIQRGQWIRAAILGANDGLLSTTSLMLgvgaakedRRSMVLSGLAGALAGACSMAVGEFVSVSTQRDIqkattstncervMKLDITsvketklhetepklptifspgrspMMKVVIEDaktfpssselrddlqevlpnpFKAAAASALAFLCGSFVPLLPAILFARYIVRIVVIAIVTSLALVLFGgfgahlggspiRVSAVRVLVGGWIAMGVTygllkpfdsegrnd
Flexible Loop (DISEMBL)
massqtqepcapdhenLGMMKERIQRGQWIRAAILGANDGLLSTTSLMLGVGAAKEDRRSMVLSGLAGALAGACSMAVGEFvsvstqrdiqkattstncervmkLDITsvketklhetepklptifspgrspMMKVVIEDAKTFPSSSELRDDLQEVLPNPFKAAAASALAFLCGSFVPLLPAILFARYIVRIVVIAIVTSLALVLFGGFGAHLGGSPIRVSAVRVLVGGWIAMgvtygllkpfdsegrnd
Low Complexity Region (SEG)
MASSQTQEPCAPDHENLGMMKERIQRGQWIRAAILGANDGLLSTTSLMLGVGAAKEDRRsmvlsglagalagacsmavGEFVSVSTQRDIQKATTSTNCERVMKLDITSVKETKLHETEPKLPTIFSPGRSPMMKVVIEDAKTFPSSSELRDDLQEVLPNPFKaaaasalaFLCGSFVPLLPAILFaryivrivviaivTSLALVLFGGFGAHLGGSPIRVSAVRVLVGGWIAMGVTYGLLKPFDSEGRND
Disordered region (IsUnstruct)
***********************IQRGQWIRAAILGANDGLLSTTSLMLGVGAAKEDRRSMVLSGLAGALAGACSMAVGEFVSVSTQRDIQKATTSTNCERVMKLDIT*************************************************LPNPFKAAAASALAFLCGSFVPLLPAILFARYIVRIVVIAIVTSLALVLFGGFGAHLGGSPIRVSAVRVLVGGWIAMGVTYGLLKP********
Disordered Region (DISOPRED)
****************************WIRAAILGANDGLLSTTSLMLGVGAAKEDRRSMVLSGLAGALAGACSMAVGEFVSVSTQRDIQKATTSTNCERVMKLDITSVKETKLHETEPKLPTIFSPGRSPMMKVVIEDAKTFPSSSELRDDLQEVLPNPFKAAAASALAFLCGSFVPLLPAILFARYIVRIVVIAIVTSLALVLFGGFGAHLGGSPIRVSAVRVLVGGWIAMGVTYGLLKP*DSE****
Disordered Region (DISEMBL)
**********APDHENLGMMKERIQRGQWIRAAILGANDGLLSTTSLMLGVGAAKEDRRSMVLSGLAGALAGACSMAVGEFVSV***********STNCERVMKLDITSVKETKLHETEPKLPTIFSPGRSPMMKVVIEDAKTFPSSSELRDDLQEVLPNPFKAAAASALAFLCGSFVPLLPAILFARYIVRIVVIAIVTSLALVLFGGFGAHLGGSPIRVSAVRVLVGGWIAMGVTYGLLKPFDSEGRND
Disordered Region (DISPRO)
*******************MKERIQRGQWIRAAILGANDGLLSTTSLMLGVGAAKEDRRSMVLSGLAGALAGACSMAVGEFVSVSTQRDIQKATTSTNCERVMKLDITSVKETKLHETEPKLPTIFSPGRSPMMKVVIEDAKTFPSSSELRDDLQEVLPNPFKAAAASALAFLCGSFVPLLPAILFARYIVRIVVIAIVTSLALVLFGGFGAHLGGSPIRVSAVRVLVGGWIAMGVTYGLLKPFDSE****
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MASSQTQEPCAPDHENLGMMKERIQRGQWIRAAILGANDGLLSTTSLMLGVGAAKEDRRSMVLSGLAGALAGACSMAVGEFVSVSTQRDIQKATTSTNCERVMKLDITSVKETKLHETEPKLPTIFSPGRSPMMKVVIEDAKTFPSSSELRDDLQEVLPNPFKAAAASALAFLCGSFVPLLPAILFARYIVRIVVIAIVTSLALVLFGGFGAHLGGSPIRVSAVRVLVGGWIAMGVTYGLLKPFDSEGRND
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	251	2.2.26 [Sep-21-2011]
Q9M2C0	198	Vacuolar iron transporter	yes	no	0.741	0.939	0.422	2e-41
Q9LPU9	200	Vacuolar iron transporter	no	no	0.669	0.84	0.440	1e-35
Q9M2C3	200	Vacuolar iron transporter	no	no	0.725	0.91	0.424	2e-35
Q9SRD3	196	Vacuolar iron transporter	no	no	0.665	0.852	0.431	3e-34
P16313	206	Nodulin-21 OS=Glycine max	no	no	0.669	0.815	0.382	7e-32
Q9LSF6	219	Vacuolar iron transporter	no	no	0.780	0.894	0.418	8e-31
Q6H658	232	Vacuolar iron transporter	yes	no	0.717	0.775	0.417	6e-30
B7F138	189	Vacuolar iron transporter	no	no	0.709	0.941	0.385	4e-22
Q7XTL7	208	Vacuolar iron transporter	no	no	0.354	0.427	0.565	1e-21
Q84ZM7	249	Vacuolar iron transporter	no	no	0.709	0.714	0.395	4e-21

>sp|Q9M2C0|VITH4_ARATH Vacuolar iron transporter homolog 4 OS=Arabidopsis thaliana GN=At3g43660 PE=2 SV=1

 Score =  169 bits (428), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 103/244 (42%), Positives = 134/244 (54%), Gaps = 58/244 (23%)

Query: 13  DHENLGMMKERIQ--------RGQWIRAAILGANDGLLSTTSLMLGVGAAKEDRRSMVLS 64
           ++ NL +  E+ Q        R QW+RAA+LGANDGL+ST SLM+G+GA K+D R M+L+
Sbjct: 4   NNNNLNLDMEKDQETTFDYSKRAQWLRAAVLGANDGLVSTASLMMGIGAVKQDVRIMLLT 63

Query: 65  GLAGALAGACSMAVGEFVSVSTQRDIQKATTSTNCERVMKLDITSVKETKLHETEPKLPT 124
           G AG +AGACSMA+GEF+SV +Q DI+          V ++   S  ETK          
Sbjct: 64  GFAGLVAGACSMAIGEFISVYSQYDIE----------VAQMKRESGGETK---------- 103

Query: 125 IFSPGRSPMMKVVIEDAKTFPSSSELRDDLQEVLPNPFKAAAASALAFLCGSFVPLLPAI 184
                                         +E LP+P +AA ASALAF  G+ VPLL A 
Sbjct: 104 ------------------------------KEKLPSPTQAAIASALAFTLGAIVPLLAAA 133

Query: 185 LFARYIVRIVVIAIVTSLALVLFGGFGAHLGGSPIRVSAVRVLVGGWIAMGVTYGLLKPF 244
               Y VRI VI    +LALV+FG  GA LG +P+  S VRVL+GGW+AM +T+G  K  
Sbjct: 134 FVKEYKVRIGVIVAAVTLALVMFGWLGAVLGKAPVVKSLVRVLIGGWLAMAITFGFTKLV 193

Query: 245 DSEG 248
            S G
Sbjct: 194 GSHG 197

Probable vacuolar iron transporter that may be involved in the regulation of iron distribution throughout the plant.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9LPU9|VITH1_ARATH Vacuolar iron transporter homolog 1 OS=Arabidopsis thaliana GN=At1g21140 PE=2 SV=1

 Score =  149 bits (377), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 96/218 (44%), Positives = 124/218 (56%), Gaps = 50/218 (22%)

Query: 25  QRGQWIRAAILGANDGLLSTTSLMLGVGAAKEDRRSMVLSGLAGALAGACSMAVGEFVSV 84
           +R QW+RAA+LGANDGL+ST SLM+GVGA K+D + M+LSG AG +AGACSMA+GEFVSV
Sbjct: 26  KRAQWLRAAVLGANDGLVSTASLMMGVGAVKQDVKVMILSGFAGLVAGACSMAIGEFVSV 85

Query: 85  STQRDIQKATTSTNCERVMKLDITSVKETKLHETEPKLPTIFSPGRSPMMKVVIEDAKTF 144
            +Q DI+               +  +K     + E                         
Sbjct: 86  YSQYDIE---------------VAQMKRENGGQVE------------------------- 105

Query: 145 PSSSELRDDLQEVLPNPFKAAAASALAFLCGSFVPLLPAILFARYIVRIVVIAIVTSLAL 204
                     +E LP+P +AAAASALAF  G+ VPL+ A     Y VRI  I    +LAL
Sbjct: 106 ----------KEKLPSPMQAAAASALAFSLGAIVPLMAAAFVKDYHVRIGAIVAAVTLAL 155

Query: 205 VLFGGFGAHLGGSPIRVSAVRVLVGGWIAMGVTYGLLK 242
           V+FG  GA LG +P+  S+ RVL+GGW+AM VT+GL K
Sbjct: 156 VMFGWLGAVLGKAPVFKSSARVLIGGWLAMAVTFGLTK 193

Probable vacuolar iron transporter that may be involved in the regulation of iron distribution throughout the plant.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9M2C3|VITH3_ARATH Vacuolar iron transporter homolog 3 OS=Arabidopsis thaliana GN=At3g43630 PE=3 SV=1

 Score =  149 bits (377), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 101/238 (42%), Positives = 131/238 (55%), Gaps = 56/238 (23%)

Query: 16  NLGMMKER------IQRGQWIRAAILGANDGLLSTTSLMLGVGAAKEDRRSMVLSGLAGA 69
           NL M K++       +R QW+RAA+LGANDGL+ST SLM+GVGA K++ + M+L+G AG 
Sbjct: 8   NLDMEKDQEKAFDYSKRAQWLRAAVLGANDGLVSTASLMMGVGAVKQNVKIMILTGFAGL 67

Query: 70  LAGACSMAVGEFVSVSTQRDIQKATTSTNCERVMKLDITSVKETKLHETEPKLPTIFSPG 129
           +AGACSMA+GEFVSV +Q DI               ++  +K     E E          
Sbjct: 68  VAGACSMAIGEFVSVYSQYDI---------------EVAQMKRETGGEIE---------- 102

Query: 130 RSPMMKVVIEDAKTFPSSSELRDDLQEVLPNPFKAAAASALAFLCGSFVPLLPAILFARY 189
                                    +E LP+P +AAAASALAF  G+ VPLL A     Y
Sbjct: 103 -------------------------KEKLPSPTQAAAASALAFSLGAMVPLLAAAFVKEY 137

Query: 190 IVRIVVIAIVTSLALVLFGGFGAHLGGSPIRVSAVRVLVGGWIAMGVTYGLLKPFDSE 247
            VRI  I    +LALV+FG  GA LG +P+  S++RVLVGGW+AM +TYG  K   S 
Sbjct: 138 KVRIGAIVAAVTLALVMFGWLGAVLGKAPVVKSSLRVLVGGWLAMAITYGFTKLIGSH 195

Probable vacuolar iron transporter that may be involved in the regulation of iron distribution throughout the plant.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SRD3|VITH2_ARATH Vacuolar iron transporter homolog 2 OS=Arabidopsis thaliana GN=At1g76800 PE=2 SV=1

 Score =  145 bits (365), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 94/218 (43%), Positives = 125/218 (57%), Gaps = 51/218 (23%)

Query: 25  QRGQWIRAAILGANDGLLSTTSLMLGVGAAKEDRRSMVLSGLAGALAGACSMAVGEFVSV 84
           +R QW+RAA+LGANDGL+ST SLM+GVGA K D ++M+LSG AG +AGACSMA+GEFVSV
Sbjct: 23  KRSQWLRAAVLGANDGLVSTASLMMGVGAVKHDVKAMILSGFAGMVAGACSMAIGEFVSV 82

Query: 85  STQRDIQKATTSTNCERVMKLDITSVKETKLHETEPKLPTIFSPGRSPMMKVVIEDAKTF 144
            +Q DI+ A         M+ D   +++ K                              
Sbjct: 83  YSQYDIEVAQ--------MERDSVEIEKEK------------------------------ 104

Query: 145 PSSSELRDDLQEVLPNPFKAAAASALAFLCGSFVPLLPAILFARYIVRIVVIAIVTSLAL 204
                        LP+P +AAAASALAF  G+ VPLL A     Y +RI+ + +  ++AL
Sbjct: 105 -------------LPSPMQAAAASALAFSAGAIVPLLAAAFVKEYKMRIISVVVAVTVAL 151

Query: 205 VLFGGFGAHLGGSPIRVSAVRVLVGGWIAMGVTYGLLK 242
           ++FG  GA LG +P   S+ RVL GGW+AM VT+GL K
Sbjct: 152 MVFGWLGAALGKAPAVRSSARVLFGGWLAMAVTFGLTK 189

Probable vacuolar iron transporter that may be involved in the regulation of iron distribution throughout the plant.

Arabidopsis thaliana (taxid: 3702)

>sp|P16313|NO21_SOYBN Nodulin-21 OS=Glycine max PE=2 SV=1

 Score =  137 bits (345), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 81/212 (38%), Positives = 114/212 (53%), Gaps = 44/212 (20%)

Query: 7   QEPCAPDHENLGMMKERIQRGQWIRAAILGANDGLLSTTSLMLGVGAAKEDRRSMVLSGL 66
           Q     DH ++    + +QR QW+RAAILGANDGL+S  SLM+GVGA K D ++M+L+G 
Sbjct: 38  QTLATEDHTSI----DYLQRAQWLRAAILGANDGLVSVASLMMGVGAVKRDAKAMLLAGF 93

Query: 67  AGALAGACSMAVGEFVSVSTQRDIQKATTSTNCERVMKLDITSVKETKLHETEPKLPTIF 126
           AG +AGAC MA+GEFV+V TQ +++        +R M + +   ++ ++ E E       
Sbjct: 94  AGLVAGACGMAIGEFVAVYTQYEVEVG----QMKRDMNMSVGGERDLEM-EME------- 141

Query: 127 SPGRSPMMKVVIEDAKTFPSSSELRDDLQEVLPNPFKAAAASALAFLCGSFVPLLPAILF 186
                                       +  LPNP +A  ASAL F  G+ VPLL A   
Sbjct: 142 ----------------------------RRTLPNPLQATLASALCFSIGALVPLLSAAFI 173

Query: 187 ARYIVRIVVIAIVTSLALVLFGGFGAHLGGSP 218
             Y  RI+V+  ++ LALV+FG  GA LG +P
Sbjct: 174 ENYRTRIIVVVAMSCLALVVFGWVGAKLGKTP 205

May play an important role in symbiotic nitrogen fixation.

Glycine max (taxid: 3847)

>sp|Q9LSF6|VTH21_ARATH Vacuolar iron transporter homolog 2.1 OS=Arabidopsis thaliana GN=At3g25190 PE=2 SV=1

 Score =  134 bits (336), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 100/239 (41%), Positives = 141/239 (58%), Gaps = 43/239 (17%)

Query: 4   SQTQEPCAPDHENLGMMKERIQRGQWIRAAILGANDGLLSTTSLMLGVGAAKEDRRSMVL 63
           +Q   P A   E      + +QR QW+RAA+LGANDGL++  SLM+GVG+ KED ++M+L
Sbjct: 15  NQKTRPRAEKEE-----VDYMQRAQWLRAALLGANDGLVTVASLMMGVGSIKEDVKAMLL 69

Query: 64  SGLAGALAGACSMAVGEFVSVSTQRDIQKATTSTNCERVMKLDITSVKETKLHETEPKLP 123
            G AG +AGACSMA+GEFVSV TQRDI+ A      E   K  ++++ E +  E + +  
Sbjct: 70  VGFAGLVAGACSMAIGEFVSVCTQRDIETAQMKRAIEH--KTSLSAIDEQEEEEKKER-- 125

Query: 124 TIFSPGRSPMMKVVIEDAKTFPSSSELRDDLQEVLPNPFKAAAASALAFLCGSFVPLLPA 183
                                             LPNP +AA ASALAF  G+ +PLL A
Sbjct: 126 ----------------------------------LPNPGQAAIASALAFSVGAAMPLLGA 151

Query: 184 ILFARYIVRIVVIAIVTSLALVLFGGFGAHLGGSPIRVSAVRVLVGGWIAMGVTYGLLK 242
           +    + VR+VV+A+V ++ALV+FG  GA LG + +  S+VRV++GGW+AM +T+GL K
Sbjct: 152 VFIENHKVRMVVVAVVATIALVVFGVTGAVLGKTSVVKSSVRVVIGGWMAMALTFGLTK 210

Probable vacuolar iron transporter that may be involved in the regulation of iron distribution throughout the plant.

Arabidopsis thaliana (taxid: 3702)

>sp|Q6H658|VITH1_ORYSJ Vacuolar iron transporter homolog 1 OS=Oryza sativa subsp. japonica GN=Os02g0644200 PE=2 SV=1

 Score =  130 bits (328), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 94/225 (41%), Positives = 121/225 (53%), Gaps = 45/225 (20%)

Query: 24  IQRGQWIRAAILGANDGLLSTTSLMLGVGAAKEDRRSMVLSGLAGALAGACSMAVGEFVS 83
           + R QW+RAA+LGANDGL+S  SLM+GVGAA   RR+M++SGLAG +AGACSMA+GEFVS
Sbjct: 52  VARAQWLRAAVLGANDGLVSVASLMVGVGAANGTRRAMLVSGLAGLVAGACSMAIGEFVS 111

Query: 84  VSTQRDIQKATTSTNCERVMKLDITSVKETKLHETEPKLPTIFSPGRSPMMKVVIEDAKT 143
           V  Q DIQ A                                            IE A+ 
Sbjct: 112 VYAQCDIQAAQ-------------------------------------------IERARG 128

Query: 144 FPSSSELRDDLQEVLPNPFKAAAASALAFLCGSFVPLLPAILFARYIVRIVVIAIVTSLA 203
              +       +E LP+P  AA ASAL+F  G+ +PLL       +  R+  +   +SL 
Sbjct: 129 GKDADGGE--EEEELPSPTMAAVASALSFAAGAALPLLAGGFVRPWAARVAAVCAASSLG 186

Query: 204 LVLFGGFGAHLGGSPIRVSAVRVLVGGWIAMGVTYGLLKPFDSEG 248
           L  FG   A+LGG+ +  S VR+LVGGW+AM VTYG+LK F   G
Sbjct: 187 LAGFGVASAYLGGAGVARSGVRMLVGGWLAMAVTYGVLKLFGMHG 231

Probable vacuolar iron transporter that may be involved in the regulation of iron distribution throughout the plant.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|B7F138|VITH2_ORYSJ Vacuolar iron transporter homolog 2 OS=Oryza sativa subsp. japonica GN=Os04g0538400 PE=2 SV=1

 Score =  105 bits (261), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 86/223 (38%), Positives = 120/223 (53%), Gaps = 45/223 (20%)

Query: 24  IQRGQWIRAAILGANDGLLSTTSLMLGVGAAKEDRRSMVLSGLAGALAGACSMAVGEFVS 83
           + R QW+RAA+LGANDGL+S  SLM+G+GA  E+ ++M++SGLAG +AGACSMA+GEFVS
Sbjct: 1   MARAQWLRAAVLGANDGLVSVASLMIGIGAVNENNKAMLVSGLAGLVAGACSMAIGEFVS 60

Query: 84  VSTQRDIQKATTSTNCERVMKLDITSVKETKLHETEPKLPTIFSPGRSPMMKVVIEDAKT 143
           V  Q DI+     T  ER   +D       +                             
Sbjct: 61  VYAQYDIEV----TQIERDGDIDGADAAAAR----------------------------- 87

Query: 144 FPSSSELRDDLQEVLPNPFKAAAASALAFLCGSFVPLLPAILFARYIVRIVVIAIVTSLA 203
                       E LP+P +AA ASALAF  G  +PLL +     +  R+ V+   +S+ 
Sbjct: 88  ------------EKLPSPTQAAFASALAFAIGGLLPLLTSGFIKPWGPRVGVVCAASSVG 135

Query: 204 LVLFGGFGAHLGGSPIRVSAVRVLVGGWIAMGVTYGLLKPFDS 246
           L  FG  G +LGG+ +  S  RVL+GGW+AM +TY +L+ F +
Sbjct: 136 LAGFGAAGGYLGGANMVRSGTRVLLGGWLAMLITYAVLRLFAT 178

Probable vacuolar iron transporter that may be involved in the regulation of iron distribution throughout the plant.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q7XTL7|VITH5_ORYSJ Vacuolar iron transporter homolog 5 OS=Oryza sativa subsp. japonica GN=Os04g0686800 PE=2 SV=3

 Score =  103 bits (256), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 52/92 (56%), Positives = 67/92 (72%), Gaps = 3/92 (3%)

Query: 13  DHENLGMMKERIQ---RGQWIRAAILGANDGLLSTTSLMLGVGAAKEDRRSMVLSGLAGA 69
           D EN   + + +    R  W+RAA+LGANDGL+ST SLMLGVGA K + R+MV+SG AG 
Sbjct: 18  DAENPAAVGDELDLAARANWLRAAVLGANDGLVSTASLMLGVGAVKAEARAMVISGFAGL 77

Query: 70  LAGACSMAVGEFVSVSTQRDIQKATTSTNCER 101
           LAGACSMA+GEFVSV +QRD++ A    + +R
Sbjct: 78  LAGACSMAIGEFVSVCSQRDVELAQLERDGKR 109

Probable vacuolar iron transporter that may be involved in the regulation of iron distribution throughout the plant.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q84ZM7|VITH3_ORYSJ Vacuolar iron transporter homolog 3 OS=Oryza sativa subsp. japonica GN=Os08g0153300 PE=3 SV=1

 Score =  101 bits (252), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 87/220 (39%), Positives = 112/220 (50%), Gaps = 42/220 (19%)

Query: 26  RGQWIRAAILGANDGLLSTTSLMLGVGAAKEDRRSMVLSGLAGALAGACSMAVGEFVSVS 85
           R QW+RAA+LGANDGL+S  SLM+GVGA  E  R+M++SG+AG +AGACSMA+GEFVSV 
Sbjct: 67  RAQWLRAAVLGANDGLVSVASLMIGVGAVSESGRAMLVSGVAGLVAGACSMAIGEFVSVY 126

Query: 86  TQRDIQKATTSTNCERVMKLDITSVKETKLHETEPKLPTIFSPGRSPMMKVVIEDAKTFP 145
            Q DI+ A       +  +      +E    E   +LP+                     
Sbjct: 127 AQYDIEVAAARRRRRQRRRRCDGDGEE----EGSGRLPS--------------------- 161

Query: 146 SSSELRDDLQEVLPNPFKAAAASALAFLCGSFVPLLPAILFARYIVRI-VVIAIVTSLAL 204
                          PFKAAAASALAF  G+ +PLL       +  R+  V A  ++   
Sbjct: 162 ---------------PFKAAAASALAFTVGALLPLLAGGFVRPWAPRVAAVCAATSAALA 206

Query: 205 VLFGGFGAHLGGSPIRVSAVRVLVGGWIAMGVTYGLLKPF 244
                  A  G SP R SA RVL+GGW AM   YG+L+ F
Sbjct: 207 GFGALGAALGGASPAR-SAARVLLGGWAAMAACYGVLRLF 245

Probable vacuolar iron transporter that may be involved in the regulation of iron distribution throughout the plant.

Oryza sativa subsp. japonica (taxid: 39947)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	251
224056731	287	predicted protein [Populus trichocarpa]	0.968	0.846	0.560	9e-75
255575259	294	conserved hypothetical protein [Ricinus	0.972	0.829	0.565	2e-73
224117664	236	predicted protein [Populus trichocarpa]	0.908	0.966	0.624	3e-68
225431646	211	PREDICTED: vacuolar iron transporter hom	0.733	0.872	0.585	2e-53
296088494	494	unnamed protein product [Vitis vinifera]	0.685	0.348	0.572	1e-45
147821647	526	hypothetical protein VITISV_037521 [Viti	0.800	0.382	0.539	3e-44
449444935	196	PREDICTED: vacuolar iron transporter hom	0.745	0.954	0.440	4e-42
297831412	219	hypothetical protein ARALYDRAFT_480028 [	0.800	0.917	0.423	3e-40
15229736	198	vacuolar iron transporter-like protein [	0.741	0.939	0.422	9e-40
356524880	229	PREDICTED: nodulin-21-like [Glycine max]	0.733	0.803	0.413	7e-39

>gi|224056731|ref|XP_002298995.1| predicted protein [Populus trichocarpa] gi|222846253|gb|EEE83800.1| predicted protein [Populus trichocarpa]

 Score =  285 bits (730), Expect = 9e-75,   Method: Compositional matrix adjust.
 Identities = 162/289 (56%), Positives = 195/289 (67%), Gaps = 46/289 (15%)

Query: 1   MASSQTQEPCAPDH-----ENLGMMKERIQRGQWIRAAILGANDGLLSTTSLMLGVGAAK 55
           MAS Q  E CA +H     +      +R++R QW+RAAILGANDGLLSTTSLMLGVGAAK
Sbjct: 1   MASHQISETCA-EHKISVADEDAQKVQRLRRAQWLRAAILGANDGLLSTTSLMLGVGAAK 59

Query: 56  EDRRSMVLSGLAGALAGACSMAVGEFVSVSTQRDIQKATTSTNCERV-------MKLDIT 108
           ED RSMVLSGLAGALAGACSMAVGEFVSVSTQRDI++ T S    +        ++LD+T
Sbjct: 60  EDSRSMVLSGLAGALAGACSMAVGEFVSVSTQRDIERETVSDFSSKNDGKDSPGIRLDVT 119

Query: 109 SV-----KETKLHE-----------------------TEPKLPTIFSPGRSPMMKVVIED 140
           +       E KL +                        EPKLP   SPGRSP MKV+ ED
Sbjct: 120 ATLASMNGEAKLDDLPGNIQFAKLISEPTQRRSPSMIHEPKLPPGMSPGRSPAMKVIQED 179

Query: 141 AKTFPSSSE--LRDDLQEVLPNPFKAAAASALAFLCGSFVPLLPAILFARYIVRIVVIAI 198
           AK    S+E  L DD +EVL NP+KA+ AS L+FL GS VPLL A+L A+ +V IV+I +
Sbjct: 180 AKK---SAEIMLEDDREEVLTNPYKASIASGLSFLIGSCVPLLSAVLVAQNVVSIVMIPV 236

Query: 199 VTSLALVLFGGFGAHLGGSPIRVSAVRVLVGGWIAMGVTYGLLKPFDSE 247
           V S+AL  FGG GA+LGGSP+R+SAVR+L+GGWIAM +TYGLLKPFD +
Sbjct: 237 VASVALAFFGGLGAYLGGSPVRISAVRILLGGWIAMAITYGLLKPFDKD 285

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255575259|ref|XP_002528533.1| conserved hypothetical protein [Ricinus communis] gi|223532035|gb|EEF33845.1| conserved hypothetical protein [Ricinus communis]

 Score =  281 bits (718), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 164/290 (56%), Positives = 200/290 (68%), Gaps = 46/290 (15%)

Query: 4   SQT--QEPCAPDHENLGMMKERIQRGQWIRAAILGANDGLLSTTSLMLGVGAAKEDRRSM 61
           SQT  ++  A   +N    K R++R QW+RAAILGA+DGLLSTTSLMLGVGAA+E+ RSM
Sbjct: 7   SQTCAEQKIAEADDNYQKAK-RLERAQWLRAAILGASDGLLSTTSLMLGVGAAEENGRSM 65

Query: 62  VLSGLAGALAGACSMAVGEFVSVSTQRDIQKATTS-TNCER-----VMKLDITSV----- 110
           VL+G+AG LAGACSMAVGEFVSVSTQRDI+KAT S  N E       +KLDI +      
Sbjct: 66  VLTGVAGGLAGACSMAVGEFVSVSTQRDIEKATVSRHNSEHGEYASTIKLDIIATPASIE 125

Query: 111 KETKLHET-----------------------------EPKLPTIFSPGRSPMMKVVIEDA 141
           K+TKL ET                             EP LP   +PGRSP++K++ EDA
Sbjct: 126 KDTKLGETNLAANPLENIQHINFLSEPREKGSPSIVVEPTLPLSVTPGRSPILKILKEDA 185

Query: 142 KTFPSSSELRDDLQEVL-PNPFKAAAASALAFLCGSFVPLLPAILFARYIVRIVVIAIVT 200
           +    S  L++D +EVL  NP+KAAAASA++FL GS VPL+PAIL      RI+VI +V 
Sbjct: 186 REV--SGMLQEDNREVLIANPYKAAAASAVSFLFGSSVPLVPAILVTHNASRIMVIVVVA 243

Query: 201 SLALVLFGGFGAHLGGSPIRVSAVRVLVGGWIAMGVTYGLLKPFDSEGRN 250
           S+ALVLFGG+GA+LGGSPIR+SAVRVLVGGWIAM VTYGLLKPFDS+  +
Sbjct: 244 SMALVLFGGYGAYLGGSPIRMSAVRVLVGGWIAMAVTYGLLKPFDSDDED 293

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224117664|ref|XP_002317637.1| predicted protein [Populus trichocarpa] gi|222860702|gb|EEE98249.1| predicted protein [Populus trichocarpa]

 Score =  264 bits (674), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 158/253 (62%), Positives = 184/253 (72%), Gaps = 25/253 (9%)

Query: 1   MASSQTQEPCAPDH-----ENLGMMKERIQRGQWIRAAILGANDGLLSTTSLMLGVGAAK 55
           MAS Q    CA +H     +      +R++R QW RAAILGANDGLLSTTSLMLGVGAAK
Sbjct: 1   MASHQISGTCA-EHTISVADEDARKVQRLRRAQWPRAAILGANDGLLSTTSLMLGVGAAK 59

Query: 56  EDRRSMVLSGLAGALAGACSMAVGEFVSVSTQRDIQKATTSTNCERVMKLDITSVKETKL 115
           EDRR MVLSGLAGA+AGACSMAVGEFVSVSTQ+DI+K    T   R M L          
Sbjct: 60  EDRRYMVLSGLAGAVAGACSMAVGEFVSVSTQKDIEK---ETRMSRSMIL---------- 106

Query: 116 HETEPKLPTIFSPGRSPMMKVVIEDAKTFPSSSELR-DDLQEVLPNPFKAAAASALAFLC 174
              EPKLP   SPGRSP+MKV+ ED K  P    LR DD +EVL NP+KAA AS ++FL 
Sbjct: 107 ---EPKLPPGMSPGRSPVMKVIQEDGKRSPEI--LREDDGEEVLTNPYKAAVASGVSFLI 161

Query: 175 GSFVPLLPAILFARYIVRIVVIAIVTSLALVLFGGFGAHLGGSPIRVSAVRVLVGGWIAM 234
           GS VP L A+L A+ +VRIVVIA+V S+AL  FGGFGA+LGGSPIR+SAVR+L+GGWIAM
Sbjct: 162 GSCVPSLSAVLVAQNVVRIVVIAVVASIALAFFGGFGAYLGGSPIRISAVRILLGGWIAM 221

Query: 235 GVTYGLLKPFDSE 247
            +T+GLLKPFD +
Sbjct: 222 AITFGLLKPFDKD 234

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225431646|ref|XP_002263267.1| PREDICTED: vacuolar iron transporter homolog 4-like [Vitis vinifera]

 Score =  214 bits (546), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 133/227 (58%), Positives = 152/227 (66%), Gaps = 43/227 (18%)

Query: 22  ERIQRGQWIRAAILGANDGLLSTTSLMLGVGAAKEDRRSMVLSGLAGALAGACSMAVGEF 81
           ER+QR QW+RAAILGANDGLLSTTSLMLG+GA + DR SMVLSGLAGALAGACSMAVGEF
Sbjct: 26  ERVQRAQWLRAAILGANDGLLSTTSLMLGIGAIRHDRWSMVLSGLAGALAGACSMAVGEF 85

Query: 82  VSVSTQRDIQKATTSTNCERVMKLDITSVKETKLHETEPKLPTIFSPGRSPMMKVVIEDA 141
           VSVS QRDI++AT S                                          + A
Sbjct: 86  VSVSMQRDIEEATVS------------------------------------------QYA 103

Query: 142 KTFPSSSELRDDL-QEVLPNPFKAAAASALAFLCGSFVPLLPAILFARYIVRIVVIAIVT 200
           K      E  + + +E LP+P+KAAAASALAFLCGSFVP+  A+  A   VR VVI +V 
Sbjct: 104 KANTMKGEENNIIGKETLPSPYKAAAASALAFLCGSFVPIASAMFAAHNTVRTVVIVVVA 163

Query: 201 SLALVLFGGFGAHLGGSPIRVSAVRVLVGGWIAMGVTYGLLKPFDSE 247
           SLAL LFGG GA LGG+PIRVSAVRVLVGGW+AM +TYGLLKPF+ E
Sbjct: 164 SLALALFGGVGAQLGGAPIRVSAVRVLVGGWVAMAITYGLLKPFEKE 210

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296088494|emb|CBI37485.3| unnamed protein product [Vitis vinifera]

 Score =  189 bits (479), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 123/215 (57%), Positives = 141/215 (65%), Gaps = 43/215 (20%)

Query: 22  ERIQRGQWIRAAILGANDGLLSTTSLMLGVGAAKEDRRSMVLSGLAGALAGACSMAVGEF 81
           ER+QR QW+RAAILGANDGLLSTTSLMLG+GA + DR SMVLSGLAGALAGACSMAVGEF
Sbjct: 26  ERVQRAQWLRAAILGANDGLLSTTSLMLGIGAIRHDRWSMVLSGLAGALAGACSMAVGEF 85

Query: 82  VSVSTQRDIQKATTSTNCERVMKLDITSVKETKLHETEPKLPTIFSPGRSPMMKVVIEDA 141
           VSVS QRDI++AT S                                          + A
Sbjct: 86  VSVSMQRDIEEATVS------------------------------------------QYA 103

Query: 142 KTFPSSSELRDDL-QEVLPNPFKAAAASALAFLCGSFVPLLPAILFARYIVRIVVIAIVT 200
           K      E  + + +E LP+P+KAAAASALAFLCGSFVP+  A+  A   VR VVI +V 
Sbjct: 104 KANTMKGEENNIIGKETLPSPYKAAAASALAFLCGSFVPIASAMFAAHNTVRTVVIVVVA 163

Query: 201 SLALVLFGGFGAHLGGSPIRVSAVRVLVGGWIAMG 235
           SLAL LFGG GA LGG+PIRVSAVRVLVGGW+ +G
Sbjct: 164 SLALALFGGVGAQLGGAPIRVSAVRVLVGGWLGIG 198

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147821647|emb|CAN72688.1| hypothetical protein VITISV_037521 [Vitis vinifera]

 Score =  184 bits (467), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 129/239 (53%), Positives = 155/239 (64%), Gaps = 38/239 (15%)

Query: 22  ERIQRGQWIRAAILGANDGLLSTTSLMLGVGAAKEDRRSMVLSGLAGALAGACSMAVGEF 81
           ER+QR QW+RAAILGANDGLLSTTSLMLG+GA + DR SMVLSGLAGALAGACSMAVGEF
Sbjct: 125 ERVQRAQWLRAAILGANDGLLSTTSLMLGIGAIRHDRWSMVLSGLAGALAGACSMAVGEF 184

Query: 82  VSVSTQRDIQKATTSTNC----------ERVMKLDITSVKETKLHETEP-KLPTIFSPG- 129
           VSVS QRDI++AT S  C          ++V+KLD+ +     + ET P ++ T  SP  
Sbjct: 185 VSVSMQRDIEEATVS-QCTAKSKLCKQDDKVIKLDVVASPPPTVVETMPAQINTALSPAV 243

Query: 130 ----RSPMMKVVIEDAKT------------FPSSSELRDDLQ---------EVLPNPFKA 164
                +P  K+  E A+             F SS    + ++         E LP+P+KA
Sbjct: 244 TPSKGTPCAKLTXEPAEKVSXXMTPGKKLPFGSSPGEANTMKGEENXIIGKETLPSPYKA 303

Query: 165 AAASALAFLCGSFVPLLPAILFARYIVRIVVIAIVTSLALVLFGGFGAHLGGSPIRVSA 223
           AAASALAFLCGSFVP+  A+  A   VR VVI +V SLAL LFGG GA LGG+PIRVSA
Sbjct: 304 AAASALAFLCGSFVPIASAMFAAHNTVRTVVIVVVASLALALFGGVGAQLGGAPIRVSA 362

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449444935|ref|XP_004140229.1| PREDICTED: vacuolar iron transporter homolog 4-like [Cucumis sativus]

 Score =  177 bits (449), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 100/227 (44%), Positives = 134/227 (59%), Gaps = 40/227 (17%)

Query: 22  ERIQRGQWIRAAILGANDGLLSTTSLMLGVGAAKEDRRSMVLSGLAGALAGACSMAVGEF 81
           +  QR QW+RAAILGANDGL+S  SLM+GVGA K D ++M+++G AG +AGACSMA+GEF
Sbjct: 9   DYTQRAQWLRAAILGANDGLVSVASLMMGVGAVKPDAKAMLIAGFAGLVAGACSMAIGEF 68

Query: 82  VSVSTQRDIQKATTSTNCERVMKLDITSVKETKLHETEPKLPTIFSPGRSPMMKVVIEDA 141
           VSV TQ DI+KA    N +             K +  EP  P                  
Sbjct: 69  VSVYTQYDIEKAQLKRNGKE------------KNNNMEPNHP------------------ 98

Query: 142 KTFPSSSELRDDLQEVLPNPFKAAAASALAFLCGSFVPLLPAILFARYIVRIVVIAIVTS 201
                      + +E LPNP +AA ASA+AF  G+ +PL+ A+    + VR+ V+A V S
Sbjct: 99  ----------GEEEEKLPNPLQAALASAIAFSVGAVIPLVAAVFIRDHKVRLGVVAAVAS 148

Query: 202 LALVLFGGFGAHLGGSPIRVSAVRVLVGGWIAMGVTYGLLKPFDSEG 248
           L L++FG  GA LG +P+  SA RV+VGGW+AM +T+GL K   S+G
Sbjct: 149 LTLLVFGIVGAILGRTPVGKSAARVVVGGWMAMAITFGLTKLLGSKG 195

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297831412|ref|XP_002883588.1| hypothetical protein ARALYDRAFT_480028 [Arabidopsis lyrata subsp. lyrata] gi|297329428|gb|EFH59847.1| hypothetical protein ARALYDRAFT_480028 [Arabidopsis lyrata subsp. lyrata]

 Score =  171 bits (433), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 105/248 (42%), Positives = 143/248 (57%), Gaps = 47/248 (18%)

Query: 2   ASSQTQEPCAPDHENLGMMKERI---QRGQWIRAAILGANDGLLSTTSLMLGVGAAKEDR 58
           +S ++Q+ C P  E     KE +   QR QW+RAA+LGANDGL++  SLM+GVG+ KED 
Sbjct: 11  SSPRSQKNC-PRVE-----KEEVDYMQRAQWLRAALLGANDGLVTVASLMMGVGSIKEDV 64

Query: 59  RSMVLSGLAGALAGACSMAVGEFVSVSTQRDIQKATTSTNCERVMKLDITSVKETKLHET 118
           ++M+L G AG +AGACSMA+GEFVSV TQRDI+ A      E           +T L E 
Sbjct: 65  KAMLLVGFAGLVAGACSMAIGEFVSVCTQRDIETAQMKRAIE----------NKTSLSEI 114

Query: 119 EPKLPTIFSPGRSPMMKVVIEDAKTFPSSSELRDDLQEVLPNPFKAAAASALAFLCGSFV 178
           + +                                    LPNP +AA ASALAF  G+ +
Sbjct: 115 DEQEEEEKKER----------------------------LPNPGQAAIASALAFSVGAAM 146

Query: 179 PLLPAILFARYIVRIVVIAIVTSLALVLFGGFGAHLGGSPIRVSAVRVLVGGWIAMGVTY 238
           PLL A+    + VR+VV+AIV ++ALV+FG  GA LG + +  S+VRV++GGW+AM +T+
Sbjct: 147 PLLAAVFIENHKVRMVVVAIVATIALVVFGVTGAVLGKTSVAKSSVRVVIGGWMAMALTF 206

Query: 239 GLLKPFDS 246
           GL K   S
Sbjct: 207 GLTKFIGS 214

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15229736|ref|NP_189952.1| vacuolar iron transporter-like protein [Arabidopsis thaliana] gi|75182792|sp|Q9M2C0.1|VITH4_ARATH RecName: Full=Vacuolar iron transporter homolog 4; AltName: Full=Protein NODULIN-LIKE 4 gi|7362791|emb|CAB83067.1| nodulin-like protein [Arabidopsis thaliana] gi|34365643|gb|AAQ65133.1| At3g43660 [Arabidopsis thaliana] gi|51970300|dbj|BAD43842.1| nodulin - like protein [Arabidopsis thaliana] gi|332644295|gb|AEE77816.1| vacuolar iron transporter-like protein [Arabidopsis thaliana]

 Score =  169 bits (428), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 103/244 (42%), Positives = 134/244 (54%), Gaps = 58/244 (23%)

Query: 13  DHENLGMMKERIQ--------RGQWIRAAILGANDGLLSTTSLMLGVGAAKEDRRSMVLS 64
           ++ NL +  E+ Q        R QW+RAA+LGANDGL+ST SLM+G+GA K+D R M+L+
Sbjct: 4   NNNNLNLDMEKDQETTFDYSKRAQWLRAAVLGANDGLVSTASLMMGIGAVKQDVRIMLLT 63

Query: 65  GLAGALAGACSMAVGEFVSVSTQRDIQKATTSTNCERVMKLDITSVKETKLHETEPKLPT 124
           G AG +AGACSMA+GEF+SV +Q DI+          V ++   S  ETK          
Sbjct: 64  GFAGLVAGACSMAIGEFISVYSQYDIE----------VAQMKRESGGETK---------- 103

Query: 125 IFSPGRSPMMKVVIEDAKTFPSSSELRDDLQEVLPNPFKAAAASALAFLCGSFVPLLPAI 184
                                         +E LP+P +AA ASALAF  G+ VPLL A 
Sbjct: 104 ------------------------------KEKLPSPTQAAIASALAFTLGAIVPLLAAA 133

Query: 185 LFARYIVRIVVIAIVTSLALVLFGGFGAHLGGSPIRVSAVRVLVGGWIAMGVTYGLLKPF 244
               Y VRI VI    +LALV+FG  GA LG +P+  S VRVL+GGW+AM +T+G  K  
Sbjct: 134 FVKEYKVRIGVIVAAVTLALVMFGWLGAVLGKAPVVKSLVRVLIGGWLAMAITFGFTKLV 193

Query: 245 DSEG 248
            S G
Sbjct: 194 GSHG 197

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356524880|ref|XP_003531056.1| PREDICTED: nodulin-21-like [Glycine max]

 Score =  166 bits (421), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 95/230 (41%), Positives = 134/230 (58%), Gaps = 46/230 (20%)

Query: 13  DHENLGMMKERIQRGQWIRAAILGANDGLLSTTSLMLGVGAAKEDRRSMVLSGLAGALAG 72
           DH ++    + +QR QW+RAA+LGANDGL+S TSLM+GVGA K+D ++M+++G AG +AG
Sbjct: 38  DHTSI----DYLQRAQWLRAAVLGANDGLVSVTSLMMGVGAVKKDAKAMLVAGFAGLVAG 93

Query: 73  ACSMAVGEFVSVSTQRDIQKATTSTNCERVMKLDITSVKETKLHETEPKLPTIFSPGRSP 132
           AC MA+GEFV+V TQ +++        +   +++++   E  L ETE +           
Sbjct: 94  ACGMAIGEFVAVCTQYEVELG------QMKREMNMSEGGERDL-ETEKR----------- 135

Query: 133 MMKVVIEDAKTFPSSSELRDDLQEVLPNPFKAAAASALAFLCGSFVPLLPAILFARYIVR 192
                                    LPNP +A  ASAL+F  G+ VPLL A   A Y  R
Sbjct: 136 ------------------------TLPNPLQATWASALSFSIGALVPLLSAAFVADYRTR 171

Query: 193 IVVIAIVTSLALVLFGGFGAHLGGSPIRVSAVRVLVGGWIAMGVTYGLLK 242
           ++V+  + SLALV+FG  GA LG +P   S VR L+GGWIAM +T+GL K
Sbjct: 172 VIVVVAMASLALVVFGSVGAQLGKTPKLKSCVRFLLGGWIAMSITFGLTK 221

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	251
TAIR|locus:2080213	198	AT3G43660 "AT3G43660" [Arabido	0.374	0.474	0.393	4.7e-29
TAIR|locus:2199572	200	AT1G21140 "AT1G21140" [Arabido	0.350	0.44	0.397	7.6e-29
TAIR|locus:2080193	200	AT3G43630 "AT3G43630" [Arabido	0.350	0.44	0.409	2e-28
UNIPROTKB|Q0C3T1	233	HNE_0885 "Putative membrane pr	0.832	0.896	0.279	4.7e-16
TAIR|locus:2090305	219	AT3G25190 "AT3G25190" [Arabido	0.410	0.470	0.398	3.3e-15
POMBASE|SPBC1683.10c	242	pcl1 "ferrous iron transporter	0.808	0.838	0.284	1.2e-12
TAIR|locus:2030091	196	AT1G76800 "AT1G76800" [Arabido	0.338	0.433	0.423	2.4e-12
TAIR|locus:2065383	250	VIT1 "AT2G01770" [Arabidopsis	0.832	0.836	0.225	0.00013

TAIR|locus:2080213 AT3G43660 "AT3G43660" [Arabidopsis thaliana (taxid:3702)]

 Score = 173 (66.0 bits), Expect = 4.7e-29, Sum P(2) = 4.7e-29
 Identities = 37/94 (39%), Positives = 49/94 (52%)

Query:   155 QEVLPNPFKXXXXXXXXFLCGSFVPLLPAILFXXXXXXXXXXXXXTSLALVLFGGFGAHL 214
             +E LP+P +        F  G+ VPLL A                 +LALV+FG  GA L
Sbjct:   104 KEKLPSPTQAAIASALAFTLGAIVPLLAAAFVKEYKVRIGVIVAAVTLALVMFGWLGAVL 163

Query:   215 GGSPIRVSAVRVLVGGWIAMGVTYGLLKPFDSEG 248
             G +P+  S VRVL+GGW+AM +T+G  K   S G
Sbjct:   164 GKAPVVKSLVRVLIGGWLAMAITFGFTKLVGSHG 197

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2199572 AT1G21140 "AT1G21140" [Arabidopsis thaliana (taxid:3702)]

 Score = 172 (65.6 bits), Expect = 7.6e-29, Sum P(2) = 7.6e-29
 Identities = 35/88 (39%), Positives = 48/88 (54%)

Query:   155 QEVLPNPFKXXXXXXXXFLCGSFVPLLPAILFXXXXXXXXXXXXXTSLALVLFGGFGAHL 214
             +E LP+P +        F  G+ VPL+ A                 +LALV+FG  GA L
Sbjct:   106 KEKLPSPMQAAAASALAFSLGAIVPLMAAAFVKDYHVRIGAIVAAVTLALVMFGWLGAVL 165

Query:   215 GGSPIRVSAVRVLVGGWIAMGVTYGLLK 242
             G +P+  S+ RVL+GGW+AM VT+GL K
Sbjct:   166 GKAPVFKSSARVLIGGWLAMAVTFGLTK 193

GO:0071281 "cellular response to iron ion" evidence=IEP

GO:0071369 "cellular response to ethylene stimulus" evidence=IEP

GO:0071732 "cellular response to nitric oxide" evidence=IEP

GO:0010039 "response to iron ion" evidence=IEP

TAIR|locus:2080193 AT3G43630 "AT3G43630" [Arabidopsis thaliana (taxid:3702)]

 Score = 173 (66.0 bits), Expect = 2.0e-28, Sum P(2) = 2.0e-28
 Identities = 36/88 (40%), Positives = 48/88 (54%)

Query:   155 QEVLPNPFKXXXXXXXXFLCGSFVPLLPAILFXXXXXXXXXXXXXTSLALVLFGGFGAHL 214
             +E LP+P +        F  G+ VPLL A                 +LALV+FG  GA L
Sbjct:   103 KEKLPSPTQAAAASALAFSLGAMVPLLAAAFVKEYKVRIGAIVAAVTLALVMFGWLGAVL 162

Query:   215 GGSPIRVSAVRVLVGGWIAMGVTYGLLK 242
             G +P+  S++RVLVGGW+AM +TYG  K
Sbjct:   163 GKAPVVKSSLRVLVGGWLAMAITYGFTK 190

GO:0008150 "biological_process" evidence=ND

GO:0010039 "response to iron ion" evidence=IEP

UNIPROTKB|Q0C3T1 HNE_0885 "Putative membrane protein" [Hyphomonas neptunium ATCC 15444 (taxid:228405)]

 Score = 200 (75.5 bits), Expect = 4.7e-16, P = 4.7e-16
 Identities = 61/218 (27%), Positives = 98/218 (44%)

Query:    26 RGQWIRAAILGANDGLLSTTSLMLGVGAAKEDRRXXXXXXXXXXXXXXXXXXXGEFVSVS 85
             R  W+RAA+LGANDG++ST SL++GV +A  +                     GEFVSVS
Sbjct:    15 RTGWLRAAVLGANDGIVSTASLVIGVASASAEASAVLVAGMAGLVAGAMSMAAGEFVSVS 74

Query:    86 TQRDIQKATTSTNCERVMKLDITSVKE-TKLHETEPKLPTIFSPGRSPMMKVVIEDAKTF 144
             +Q D +KA        + K     ++E T+++      P      R+   ++   DA + 
Sbjct:    75 SQADTEKADLEIERRALQKFPEEELEELTQIYIERGVTPVT---ARAVAAQLTEHDALSA 131

Query:   145 PSSSELRDDLQEVLP-NPFKXXXXXXXXFLCGSFVPLLPAILFXXXXXXXXXXXXXTSLA 203
              +  E+   L E+   NP +        F  G+ +PL+ A L              + ++
Sbjct:   132 HARDEI--GLTEIASANPVQAAWSSAASFSAGAILPLMAATL-APHDIVTPVVAVVSLIS 188

Query:   204 LVLFGGFGAHLGGSPIRVSAVRVLVGGWIAMGVTYGLL 241
             L + G   A  GG+  R + +R++  G  AM VT GL+
Sbjct:   189 LAVLGWLSASAGGAGKRRAVMRIVFWGAAAMIVT-GLI 225

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2090305 AT3G25190 "AT3G25190" [Arabidopsis thaliana (taxid:3702)]

 Score = 192 (72.6 bits), Expect = 3.3e-15, P = 3.3e-15
 Identities = 43/108 (39%), Positives = 62/108 (57%)

Query:    24 IQRGQWIRAAILGANDGLLSTTSLMLGVGAAKEDRRXXXXXXXXXXXXXXXXXXXGEFVS 83
             +QR QW+RAA+LGANDGL++  SLM+GVG+ KED +                   GEFVS
Sbjct:    30 MQRAQWLRAALLGANDGLVTVASLMMGVGSIKEDVKAMLLVGFAGLVAGACSMAIGEFVS 89

Query:    84 VSTQRDIQKATTSTNCERVMKLDITSVKETKLHETEPKLPTIFSPGRS 131
             V TQRDI+ A      E   K  ++++ E +  E + +LP   +PG++
Sbjct:    90 VCTQRDIETAQMKRAIEH--KTSLSAIDEQEEEEKKERLP---NPGQA 132

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0071281 "cellular response to iron ion" evidence=IEP

GO:0071369 "cellular response to ethylene stimulus" evidence=IEP

GO:0071732 "cellular response to nitric oxide" evidence=IEP

GO:0010039 "response to iron ion" evidence=IEP

POMBASE|SPBC1683.10c pcl1 "ferrous iron transporter Pcl1" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 168 (64.2 bits), Expect = 1.2e-12, P = 1.2e-12
 Identities = 60/211 (28%), Positives = 91/211 (43%)

Query:    29 WIRAAILGANDGLLSTTSLMLGVGAAKEDRRXXXXXXXXXXXXXXXXXXXGEFVSVSTQR 88
             W+RA++LGANDG+LS + L++GV AA  D +                   GE+VSVS+Q 
Sbjct:    20 WLRASVLGANDGILSLSGLLVGVVAANADIKVILITGVAGLMSGALSMAVGEYVSVSSQA 79

Query:    89 DIQKATTSTNCERVMKLDITS-VKETKLHETEPKLPTIFSPGRSPMMKVVIEDAKTFPSS 147
             D++ A       R M  D  + V E         L    S  R+  ++++  +A    + 
Sbjct:    80 DLEDADLQLE-RREMDADWDAEVDELAAIYRGRGLDEELS--RTVAVQLMEYNALEAHAR 136

Query:   148 SELRDDLQEVLPNPFKXXXXXXXXFLCGSFVPLLPAILFXXXXXXXXXXXXXTSLALVLF 207
              EL  ++      P          F  G   PLL +++              T   L + 
Sbjct:   137 DELGINIHTTA-KPTLAALSSAASFSVGGIFPLLTSLI-TPLEYLSLVLPIATMFFLGML 194

Query:   208 GGFGAHLGGSPIRVSAV-RVLVGGWIAMGVT 237
             G  GAH+GG+  RV A+ R +V G +AM  T
Sbjct:   195 GFVGAHIGGAK-RVRAILRAVVLGLLAMAAT 224

GO:0000139 "Golgi membrane" evidence=IEA

GO:0005774 "vacuolar membrane" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=ISO

GO:0006874 "cellular calcium ion homeostasis" evidence=ISO

GO:0006879 "cellular iron ion homeostasis" evidence=ISO

GO:0015093 "ferrous iron transmembrane transporter activity" evidence=ISO

GO:0016021 "integral to membrane" evidence=IEA

GO:0030026 "cellular manganese ion homeostasis" evidence=ISO

GO:0070627 "ferrous iron import" evidence=ISO

GO:0071421 "manganese ion transmembrane transport" evidence=ISO

TAIR|locus:2030091 AT1G76800 "AT1G76800" [Arabidopsis thaliana (taxid:3702)]

 Score = 165 (63.1 bits), Expect = 2.4e-12, P = 2.4e-12
 Identities = 36/85 (42%), Positives = 47/85 (55%)

Query:    25 QRGQWIRAAILGANDGLLSTTSLMLGVGAAKEDRRXXXXXXXXXXXXXXXXXXXGEFVSV 84
             +R QW+RAA+LGANDGL+ST SLM+GVGA K D +                   GEFVSV
Sbjct:    23 KRSQWLRAAVLGANDGLVSTASLMMGVGAVKHDVKAMILSGFAGMVAGACSMAIGEFVSV 82

Query:    85 STQRDIQKATTSTNCERVMKLDITS 109
              +Q DI+ A    +   + K  + S
Sbjct:    83 YSQYDIEVAQMERDSVEIEKEKLPS 107

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0071281 "cellular response to iron ion" evidence=IEP

GO:0071369 "cellular response to ethylene stimulus" evidence=IEP

GO:0071732 "cellular response to nitric oxide" evidence=IEP

GO:0010039 "response to iron ion" evidence=IEP

TAIR|locus:2065383 VIT1 "AT2G01770" [Arabidopsis thaliana (taxid:3702)]

 Score = 113 (44.8 bits), Expect = 0.00013, P = 0.00013
 Identities = 50/222 (22%), Positives = 82/222 (36%)

Query:    27 GQWIRAAILGANDGLLSTTSLMLGVGAAKEDRRXXXXXXXXXXXXXXXXXXXGEFVSVST 86
             G+ +R  I+G +DGL    +L  G+  A                        G +++  +
Sbjct:    32 GEIVRDIIIGVSDGLTVPFALAAGLSGANASSSIVLTAGIAEVAAGAISMGLGGYLAAKS 91

Query:    87 QRDIQKATTSTNCERVMKLDITSVKETKLHETEPKLPTI-FSPGR-SPMMKVVIEDAKTF 144
             + D          E     +I +V ET+  E    L      P   SP++  + ++ + +
Sbjct:    92 EEDHYAREMKREQE-----EIVAVPETEAAEVAEILAQYGIEPHEYSPVVNALRKNPQAW 146

Query:   145 PSSSELRDDLQEVLPNP---FKXXXXXXXXFLCGSFVPLLPAILFXXXXXXXXXXXXXTS 201
                  +R +L    P+P    +        ++ G F+PLLP +L              T 
Sbjct:   147 LDFM-MRFELGLEKPDPKRALQSAFTIAIAYVLGGFIPLLPYMLIPHAMDAVVASVVITL 205

Query:   202 LALVLFGGFGAHLGGS-PIRVSAVRVLVGGWIAMGVTYGLLK 242
              AL +FG    H  GS P+R SA      G IA    + L K
Sbjct:   206 FALFIFGYAKGHFTGSKPLR-SAFETAFIGAIASAAAFCLAK 246


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.135   0.395    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      251       211   0.00081  112 3  11 22  0.37    33
                                                     31  0.48    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  8
  No. of states in DFA:  590 (63 KB)
  Total size of DFA:  152 KB (2092 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  14.85u 0.17s 15.02t   Elapsed:  00:00:01
  Total cpu time:  14.85u 0.17s 15.02t   Elapsed:  00:00:01
  Start:  Sat May 11 13:37:28 2013   End:  Sat May 11 13:37:29 2013

GO:0005381 "iron ion transmembrane transporter activity" evidence=IGI

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0006880 "intracellular sequestering of iron ion" evidence=IGI;IMP

GO:0055072 "iron ion homeostasis" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9P6J2	PCL1_SCHPO	No assigned EC number	0.3554	0.8087	0.8388	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	251
cd02432	218	cd02432, Nodulin-21_like_1, Nodulin-21 and CCC1-re	7e-48
pfam01988	209	pfam01988, VIT1, VIT family	8e-48
cd02433	234	cd02433, Nodulin-21_like_2, Nodulin-21 and CCC1-re	4e-36
cd02436	152	cd02436, Nodulin-21, Nodulin-21	3e-33
COG1814	229	COG1814, COG1814, Uncharacterized membrane protein	1e-21
cd01059	143	cd01059, CCC1_like, CCC1-related family of protein	7e-19
cd01059	143	cd01059, CCC1_like, CCC1-related family of protein	1e-10
cd02434	225	cd02434, Nodulin-21_like_3, Nodulin-21 and CCC1-re	3e-10
cd02435	241	cd02435, CCC1, CCC1	4e-10
cd02431	149	cd02431, Ferritin_CCC1_C, CCC1-related domain of f	1e-04
TIGR00267	169	TIGR00267, TIGR00267, TIGR00267 family protein	3e-04
cd02431	149	cd02431, Ferritin_CCC1_C, CCC1-related domain of f	6e-04

>gnl|CDD|153123 cd02432, Nodulin-21_like_1, Nodulin-21 and CCC1-related protein family

 Score =  157 bits (399), Expect = 7e-48
 Identities = 88/228 (38%), Positives = 128/228 (56%), Gaps = 26/228 (11%)

Query: 23  RIQRGQWIRAAILGANDGLLSTTSLMLGVGAAKEDRRSMVLSGLAGALAGACSMAVGEFV 82
            I+R  W+RAA+LGANDG++S   L++GV AA     +++++GLAG +AGA SMA GE+V
Sbjct: 1   LIERLNWLRAAVLGANDGIVSVAGLVVGVAAATASSFTILIAGLAGLVAGALSMAAGEYV 60

Query: 83  SVSTQRDIQKATTSTNCERVMKLDITSVKETKLHETEPK-----LPTIF-SPGRSP--MM 134
           SVS+QRD +KA            DI   KE +    +P+     L  I+   G SP    
Sbjct: 61  SVSSQRDTEKA------------DIA--KERRELAEDPEAELEELADIYEERGLSPELAR 106

Query: 135 KVVIEDAKTFPSSSELRDDL---QEVLPNPFKAAAASALAFLCGSFVPLLPAILFARYIV 191
           +V  E        +  RD+L   +    NP++AA ASA++F  G+ +PLL AIL A    
Sbjct: 107 QVADELMAKDALEAHARDELGITEGEYANPWQAALASAISFSVGALLPLL-AILLAPAAW 165

Query: 192 RIVVIAIVTSLALVLFGGFGAHLGGSPIRVSAVRVLVGGWIAMGVTYG 239
           ++ V  I T LAL L G   A LGG+ +  + +R ++ G +AM +TY 
Sbjct: 166 KVPVTIIATLLALALTGYVSARLGGASVLRAILRNVIWGALAMALTYL 213

Nodulin-21_like_1: This is a family of proteins closely related to nodulin-21, a plant nodule-specific protein that may be involved in symbiotic nitrogen fixation. This family is also related to CCC1, a yeast vacuole transmembrane protein that functions as an iron and manganese transporter. . Length = 218

>gnl|CDD|216831 pfam01988, VIT1, VIT family

 Score =  157 bits (398), Expect = 8e-48
 Identities = 76/214 (35%), Positives = 111/214 (51%), Gaps = 10/214 (4%)

Query: 29  WIRAAILGANDGLLSTTSLMLGVGAAKEDRRSMVLSGLAGALAGACSMAVGEFVSVSTQR 88
           W+RAA+LGANDGL+ST  L+ GV  A    + ++L+GLAG +AGA SMA GE++SV ++R
Sbjct: 1   WLRAAVLGANDGLVSTLGLVAGVAGAGASSKVVLLAGLAGLIAGAISMAAGEYLSVKSER 60

Query: 89  DIQKATTSTNCERVMKLDITSVKETKLHETEPKLPTIFSPGRSPMMKVVIEDAKTFPSSS 148
           D+++A        +        +E         L            +V  E  K     +
Sbjct: 61  DLEEAELEREKRELENDPEGEREELAEIYRARGLS------EELARQVARELMKKDALDA 114

Query: 149 ELRD--DLQEVLPNPFKAAAASALAFLCGSFVPLLPAILFARYIVRIVVIAIVTSLALVL 206
            +R+   L+    +P KAA AS L+F+ G  +PLLP +L       ++V   VT LAL L
Sbjct: 115 MMREELGLEPETASPLKAALASGLSFILGGLIPLLPYLLAPPS--ALIVSIAVTLLALFL 172

Query: 207 FGGFGAHLGGSPIRVSAVRVLVGGWIAMGVTYGL 240
            G   A L G     SA+R++V G +A  VTY +
Sbjct: 173 LGYVKARLSGRSPLRSALRMVVIGLLAAAVTYLI 206

This family includes the vacuolar Fe2+/Mn2+ uptake transporter, Ccc1 and the vacuolar iron transporter VIT1. Length = 209

>gnl|CDD|153124 cd02433, Nodulin-21_like_2, Nodulin-21 and CCC1-related protein family

 Score =  127 bits (322), Expect = 4e-36
 Identities = 74/222 (33%), Positives = 114/222 (51%), Gaps = 1/222 (0%)

Query: 23  RIQRGQWIRAAILGANDGLLSTTSLMLGVGAAKEDRRSMVLSGLAGALAGACSMAVGEFV 82
           R +    +RAA+ GANDGL+S  +L++GV  A    ++++L+GLAG LAGA SMA GE+V
Sbjct: 13  RHRMSGNLRAAVFGANDGLVSNLALVMGVAGAGVSNQTILLTGLAGLLAGALSMAAGEYV 72

Query: 83  SVSTQRDIQKATTSTNCERVMKLDITSVKETKLHETEPKLPTIFSPGRSPMMKVVIEDAK 142
           SV++QR++ +A+       + K  +    E  L      L    +   +  +    E A 
Sbjct: 73  SVTSQRELLEASIPDERRELRKHPLEEAAELALIYRAKGLDEEEAKRVASQLMNDPEQAL 132

Query: 143 TFPSSSELRDDLQEVLPNPFKAAAASALAFLCGSFVPLLPAILFARYIVRIVVIAIVTSL 202
              +  EL  D +  L NP+ AA +S L F  G+ +P+LP +     +  +V+  ++  L
Sbjct: 133 DTLAREELGLDPEL-LGNPWSAAVSSFLLFALGALIPVLPFLFGMSGLAALVLSVLLVGL 191

Query: 203 ALVLFGGFGAHLGGSPIRVSAVRVLVGGWIAMGVTYGLLKPF 244
           AL+  G     L G    +SA+R L  G  A  VTY L   F
Sbjct: 192 ALLATGAVTGLLSGRSPGISALRQLAIGGGAAAVTYLLGLLF 233

Nodulin-21_like_2: This is a family of proteins closely related to nodulin-21, a plant nodule-specific protein that may be involved in symbiotic nitrogen fixation. This family is also related to CCC1, a yeast vacuole transmembrane protein that functions as an iron and manganese transporter. . Length = 234

>gnl|CDD|153127 cd02436, Nodulin-21, Nodulin-21

 Score =  117 bits (295), Expect = 3e-33
 Identities = 69/191 (36%), Positives = 85/191 (44%), Gaps = 40/191 (20%)

Query: 28  QWIRAAILGANDGLLSTTSLMLGVGAAKEDRRSMVLSGLAGALAGACSMAVGEFVSVSTQ 87
           QW+RAA+LGANDGL+S  SLMLGVGA   D  +M+LSGLAG +AGAC MA+GEFV V  Q
Sbjct: 1   QWLRAAVLGANDGLVSVASLMLGVGAVCADEHAMLLSGLAGLVAGACPMAIGEFVRVYRQ 60

Query: 88  RDIQKATTSTNCERVMKLDITSVKETKLHETEPKLPTIFSPGRSPMMKVVIEDAKTFPSS 147
               +A     C R                         +P   P               
Sbjct: 61  YRRPRA---ARCLRGRNRARGP-----------------APDSEPEG------------- 87

Query: 148 SELRDDLQEVLPNPFKAAAASALAFLCGSFVPLLPAILFARYIVRIVVIAIVTSLALVLF 207
                 L+   P+P  AA ASAL+F  G+  PLL A   A Y  R V+    +S      
Sbjct: 88  ------LRRQAPSPSSAATASALSFAAGALFPLLAAWFVASYASRRVLPPQ-SSAPAAPP 140

Query: 208 GGFGAHLGGSP 218
           G   A +  S 
Sbjct: 141 GRSPATVTASS 151

Nodulin-21: This is a family of proteins that may be unique to certain plants. The family member in soybean is found to be nodule-specific and is abundant during nodule development. The proteins of this family thus may play a role in symbiotic nitrogen fixation. . Length = 152

>gnl|CDD|224727 COG1814, COG1814, Uncharacterized membrane protein [Function unknown]

 Score = 89.4 bits (222), Expect = 1e-21
 Identities = 64/234 (27%), Positives = 106/234 (45%), Gaps = 21/234 (8%)

Query: 21  KERIQRGQWIRAAILGANDGLLSTTSLMLGVGAAKEDRRSMVL-SGLAGALAGACSMAVG 79
           K  I R    RA++LGANDGL+ST  L+ GV AA       +L +G AG ++GA SM +G
Sbjct: 3   KHYINRINIFRASVLGANDGLVSTAKLLEGVEAASIAAYLKLLIAGFAGLISGALSMIIG 62

Query: 80  EFVSVSTQRDIQKA---------TTSTNCERVMKLDITSVKETKLHETEPKLPTIFSPGR 130
           E++SVS+Q D + A           S      +   + +++     E       +     
Sbjct: 63  EYLSVSSQLDAELAEIQKERRLLALSLGVADALVEILGALRGESEEEAREVAEQLLQGLI 122

Query: 131 SPMMKVVIEDAKTFPSSSELRDDLQEVLPNPFKAAAASALAFLCGSFVPLLPAILFARYI 190
             +   +      + SS  L             A  +S ++F+ G+ +PLLP       +
Sbjct: 123 VGVHGRLSMGIGAYLSSRPLLA-----------ATLSSGISFIIGALLPLLPFFFLPDVL 171

Query: 191 VRIVVIAIVTSLALVLFGGFGAHLGGSPIRVSAVRVLVGGWIAMGVTYGLLKPF 244
             ++   I+  LAL + G   A L G+ I  S +R+++ G +A  +TY + + F
Sbjct: 172 SALIASIILALLALAILGAVLARLSGASIAKSILRMVLLGLLAALLTYLVGRLF 225

Length = 229

>gnl|CDD|153121 cd01059, CCC1_like, CCC1-related family of proteins

 Score = 80.0 bits (198), Expect = 7e-19
 Identities = 36/61 (59%), Positives = 50/61 (81%)

Query: 30 IRAAILGANDGLLSTTSLMLGVGAAKEDRRSMVLSGLAGALAGACSMAVGEFVSVSTQRD 89
          +RAA+LGANDGL+ST +L+ GV AA +  ++++L+GLAG +AGA SMA GE+VSV +QRD
Sbjct: 1  LRAAVLGANDGLVSTFALVAGVAAAGDSTKAILLAGLAGLVAGAISMAAGEYVSVKSQRD 60

Query: 90 I 90
           
Sbjct: 61 K 61

CCC1_like: This protein family includes the proteins related to CCC1, a yeast vacuole transmembrane protein responsible for the iron and manganese transport from the cytosol into vacuole. It also includes the proteins similar to nodulin-21, a plant nodule-specific protein that may be involved in symbiotic nitrogen fixation. . Length = 143

>gnl|CDD|153121 cd01059, CCC1_like, CCC1-related family of proteins

 Score = 57.6 bits (140), Expect = 1e-10
 Identities = 34/79 (43%), Positives = 50/79 (63%), Gaps = 1/79 (1%)

Query: 163 KAAAASALAFLCGSFVPLLPAILFARYIVRIVV-IAIVTSLALVLFGGFGAHLGGSPIRV 221
           KAA AS L+F+ G  +PLLP +L     + + V +A+V +LAL L G F A LGG+    
Sbjct: 61  KAALASGLSFILGGLLPLLPYLLLPAGSLALAVSVALVVALALFLLGAFVAKLGGAKKIR 120

Query: 222 SAVRVLVGGWIAMGVTYGL 240
           +A+R++V G +A  +TY L
Sbjct: 121 AALRMVVLGLLAAALTYLL 139

CCC1_like: This protein family includes the proteins related to CCC1, a yeast vacuole transmembrane protein responsible for the iron and manganese transport from the cytosol into vacuole. It also includes the proteins similar to nodulin-21, a plant nodule-specific protein that may be involved in symbiotic nitrogen fixation. . Length = 143

>gnl|CDD|153125 cd02434, Nodulin-21_like_3, Nodulin-21 and CCC1-related protein family

 Score = 58.1 bits (141), Expect = 3e-10
 Identities = 54/226 (23%), Positives = 98/226 (43%), Gaps = 23/226 (10%)

Query: 30  IRAAILGANDGLLSTTSLMLGVGAAKEDRRSMVLSGLAGALAGACSMAVGEFVSVSTQRD 89
           +++ + G  DG+++  +++ GV  A      +++ G A  LA   SMA GE+VS   +RD
Sbjct: 3   LKSIVFGGLDGIVTIFAIVAGVVGAGLSPFVILIIGFANLLADGISMAAGEYVSTKAERD 62

Query: 90  IQKATTS------TNCERVMKLDITSVKETK--LHETEPKLPTIFSPGRSPMMKVVIEDA 141
              +          N     K ++  +   K    E   ++  + S  R   + +++   
Sbjct: 63  FLHSEKKREEWEIENYPEGEKSEMVEIYSLKGLSEEVADQVVELLSKYRKLFVDIMM--- 119

Query: 142 KTFPSSSELRDDLQEVLPNPFKAAAASALAFLCGSFVPLLPAILFARYIVRIVV------ 195
                + EL     + LP+P K A  + L+FL    +PLLP +L   Y  +  +      
Sbjct: 120 -----TEELGLIPDDELPSPLKTALVTFLSFLVFGIIPLLPYLLGLYYYSQKEIDSVFAL 174

Query: 196 -IAIVTSLALVLFGGFGAHLGGSPIRVSAVRVLVGGWIAMGVTYGL 240
            I I  +  L L G F + L      +S + +L+ G  + GV++ L
Sbjct: 175 SILIFVAFTLFLLGSFKSKLYNGKWIISGIIMLINGAASGGVSFFL 220

Nodulin-21_like_3: This is a family of proteins closely related to nodulin-21, a plant nodule-specific protein that may be involved in symbiotic nitrogen fixation. This family is also related to CCC1, a yeast vacuole transmembrane protein that functions as an iron and manganese transporter. . Length = 225

>gnl|CDD|153126 cd02435, CCC1, CCC1

 Score = 57.7 bits (140), Expect = 4e-10
 Identities = 56/226 (24%), Positives = 90/226 (39%), Gaps = 21/226 (9%)

Query: 30  IRAAILGANDGLLSTTSLMLGVGAAKEDRRSMVLSGLAGALAGACSMAVGEFVSVSTQRD 89
           +R  I+G +DGL    +L  G+ +   D + ++  GLA   AGA SM +G +++  ++RD
Sbjct: 22  VRDIIIGLSDGLTVPFALTAGLSSLG-DTKLVITGGLAELAAGAISMGLGGYLAAKSERD 80

Query: 90  IQKATTSTNCERVMKLDITSVKETKLHETEPKLPTIFSPGRSPMMKVVIEDAKTFPSSSE 149
             +       E V     T          E  L  +   G  P+            +   
Sbjct: 81  HYQREHKRKQEAVEASPSTEQ-------EEIILYDLVQYGLVPLETAASTVTDLRKNPQA 133

Query: 150 LRD---DLQEVLPNP-----FKAAAASALAFLCGSFVPLLPAILFARYIVRIVVIAIVTS 201
           L D        L  P       +A    L++  G  +PLLP    +     +++  IVT 
Sbjct: 134 LVDFLMRFGLGLEEPDTSRALISALTIGLSYFIGGLIPLLPYFFVSTVGEALLLSVIVTL 193

Query: 202 LALVLFGGFGAHL-----GGSPIRVSAVRVLVGGWIAMGVTYGLLK 242
           +AL +FG           G       AV++LV G +A G  +GL+K
Sbjct: 194 VALFVFGYVKTWFTGGWGGAGGGVWGAVQMLVVGGLAAGAAWGLVK 239

CCC1: This domain is present in the CCC1, an iron and manganese transporter of Saccharomyces cerevisiae. CCC1 is a transmembrane protein that is located in the vacuole and transfers the iron and manganese ions from the cytosol to the vacuole. This domain may be unique to certain fungi and plants. Length = 241

>gnl|CDD|153122 cd02431, Ferritin_CCC1_C, CCC1-related domain of ferritin

 Score = 40.8 bits (96), Expect = 1e-04
 Identities = 19/61 (31%), Positives = 33/61 (54%)

Query: 30 IRAAILGANDGLLSTTSLMLGVGAAKEDRRSMVLSGLAGALAGACSMAVGEFVSVSTQRD 89
          +   +LG ND L+  T  + G+  A  +   + LSGL   +A A SMA+G ++S  ++  
Sbjct: 1  VGDFVLGLNDALVEITGALAGLTGAINNTILVGLSGLIVGIAAALSMAIGAYLSTKSESG 60

Query: 90 I 90
          +
Sbjct: 61 V 61

Ferritin_CCC1_like_C: The proteins of this family contain two domains. This is the C-terminal domain that is closely related to the CCC1, a vacuole transmembrane protein functioning as an iron and manganese transporter. The N-terminal domain is similar to ferritin-like diiron-carboxylate proteins, which are involved in a variety of iron ion related functions, such as iron storage and regulation, mono-oxygenation, and reactive radical production. This family may be unique to certain bacteria and archaea. . Length = 149

>gnl|CDD|129368 TIGR00267, TIGR00267, TIGR00267 family protein

 Score = 40.2 bits (94), Expect = 3e-04
 Identities = 46/200 (23%), Positives = 80/200 (40%), Gaps = 44/200 (22%)

Query: 31  RAAILGANDGLLSTTSLMLGVGAAKEDRRSMVLSGLAGALAGACSMAVGEFVSVSTQRDI 90
           R  + G  DG LS   ++ G  +   D   ++L+GL G +A   S A G F    T    
Sbjct: 1   RYVVRGTIDGTLSALGVVGG-ASGSVDNYVIILAGLGGGVANGMSNAFGAF----TAERA 55

Query: 91  QKATTSTNCERVMKLDITSVKETKLHETEPKLPTIFSPGRSPMMKVVIEDAKTFPSSSEL 150
           ++       E+ M +D   + +T +++            R   M   I+   TF      
Sbjct: 56  EEEREMRELEKSMLMDEGKLDDTIIYK---------QARRRVYMSGFIDGFSTF------ 100

Query: 151 RDDLQEVLPNPFKAAAASALAFLCGSFVPLLPAILFARYIVRIVVIAIVTSLALVLFGGF 210
                                   GSFVP+LP ++F R    IV + + T +AL++ G +
Sbjct: 101 -----------------------MGSFVPVLPFLVFDRMTATIVTVLL-TLIALLVLGVY 136

Query: 211 GAHLGGSPIRVSAVRVLVGG 230
              +    I +S+++++V G
Sbjct: 137 LGRISRENILISSLKMVVIG 156

This family of uncharacterized proteins shows a low level of similarity (possibly meaningful) to the predicted membrane protein YLR220W, which is involved in calcium homeostatis. It shows no similarity to any other characterized protein.This family is represented in three of the first four completed archaeal genomes, with two members in A. fulgidus [Hypothetical proteins, Conserved]. Length = 169

>gnl|CDD|153122 cd02431, Ferritin_CCC1_C, CCC1-related domain of ferritin

 Score = 38.8 bits (91), Expect = 6e-04
 Identities = 17/81 (20%), Positives = 40/81 (49%)

Query: 160 NPFKAAAASALAFLCGSFVPLLPAILFARYIVRIVVIAIVTSLALVLFGGFGAHLGGSPI 219
           NP K+A  + +A++ G  +P+LP +L +   + + +   +  LA+++F  + +   G   
Sbjct: 65  NPVKSALYTGIAYIIGVVIPILPYLLLSSVYLALALSVTLAVLAILIFNFYISVASGISF 124

Query: 220 RVSAVRVLVGGWIAMGVTYGL 240
           R   + +      A  +++ L
Sbjct: 125 RKKFIEMAGLALGAAFISFLL 145

Ferritin_CCC1_like_C: The proteins of this family contain two domains. This is the C-terminal domain that is closely related to the CCC1, a vacuole transmembrane protein functioning as an iron and manganese transporter. The N-terminal domain is similar to ferritin-like diiron-carboxylate proteins, which are involved in a variety of iron ion related functions, such as iron storage and regulation, mono-oxygenation, and reactive radical production. This family may be unique to certain bacteria and archaea. . Length = 149

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	251
cd02433	234	Nodulin-21_like_2 Nodulin-21 and CCC1-related prot	100.0
cd02432	218	Nodulin-21_like_1 Nodulin-21 and CCC1-related prot	100.0
cd02435	241	CCC1 CCC1. CCC1: This domain is present in the CCC	100.0
cd02434	225	Nodulin-21_like_3 Nodulin-21 and CCC1-related prot	100.0
PF01988	213	VIT1: VIT family; InterPro: IPR008217 Proteins con	100.0
KOG4473	247	consensus Uncharacterized membrane protein [Functi	100.0
cd02431	149	Ferritin_CCC1_C CCC1-related domain of ferritin. F	100.0
cd02437	175	CCC1_like_1 CCC1-related protein family. CCC1_like	100.0
TIGR00267	169	conserved hypothetical protein TIGR00267. This fam	100.0
cd02436	152	Nodulin-21 Nodulin-21. Nodulin-21: This is a famil	100.0
cd01059	143	CCC1_like CCC1-related family of proteins. CCC1_li	100.0
COG1814	229	Uncharacterized membrane protein [Function unknown	99.96
COG1814	229	Uncharacterized membrane protein [Function unknown	96.36
PF08006	181	DUF1700: Protein of unknown function (DUF1700); In	92.94
COG4709	195	Predicted membrane protein [Function unknown]	86.03
cd02433	234	Nodulin-21_like_2 Nodulin-21 and CCC1-related prot	82.6

>cd02433 Nodulin-21_like_2 Nodulin-21 and CCC1-related protein family

Probab=100.00  E-value=1.6e-55  Score=389.51  Aligned_cols=204  Identities=33%  Similarity=0.427  Sum_probs=183.4

Q ss_pred             hhhhhhhhHHHHHhhcCchHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHhhhhhhhhhhhhhHHHHHhhccchhhh
Q 039724           22 ERIQRGQWIRAAILGANDGLLSTTSLMLGVGAAKEDRRSMVLSGLAGALAGACSMAVGEFVSVSTQRDIQKATTSTNCER  101 (251)
Q Consensus        22 ~~~~~~~~lr~~V~G~~DGlvt~~alvaG~aga~~~~~~Vl~aGla~liAgaiSMa~G~YlS~kse~d~~~a~~~~~~~~  101 (251)
                      +..++.+|+|++|||+||||||+|++|+|++|++.|+.+|+++|+++++||++|||+|+|+|+|+|+|.+++        
T Consensus        12 ~~~~~~~~lr~~VlG~nDGlvt~falvaG~aga~~~~~~Vl~~Gla~liAga~SMa~GeYls~kse~d~~~~--------   83 (234)
T cd02433          12 GRHRMSGNLRAAVFGANDGLVSNLALVMGVAGAGVSNQTILLTGLAGLLAGALSMAAGEYVSVTSQRELLEA--------   83 (234)
T ss_pred             chhhhhhHHHHHHHhccchHHHHHHHHHHHHhhcCCcchhHHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHH--------
Confidence            345689999999999999999999999999999999999999999999999999999999999999999998        


Q ss_pred             hhhhccccHHhhhhhhcCCCCCCCCCcccchHHHHHHHcCCCCCc-----------------chhcc-cc-ccccCCChH
Q 039724          102 VMKLDITSVKETKLHETEPKLPTIFSPGRSPMMKVVIEDAKTFPS-----------------SSELR-DD-LQEVLPNPF  162 (251)
Q Consensus       102 ~~~~~~~~e~E~~re~~e~~l~~~~~~e~~el~~i~~~~g~~~~~-----------------~~~~e-~~-~~~~~~~P~  162 (251)
                                |++||+|+  ++++|++|++|+.++|+++|+++++                 .||++ +. .+++..|||
T Consensus        84 ----------~~~re~~~--i~~~p~~e~~el~~iy~~~G~~~~~a~~~~~~l~~~~~~~~~~~~~~e~g~~~~~~~~P~  151 (234)
T cd02433          84 ----------SIPDERRE--LRKHPLEEAAELALIYRAKGLDEEEAKRVASQLMNDPEQALDTLAREELGLDPELLGNPW  151 (234)
T ss_pred             ----------HHHHHHHH--hhhCcHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCcchhHHHHHHHhcCCCccccCCHH
Confidence                      56666654  7789999999999999999998532                 34433 32 345568999


Q ss_pred             HHHHHHHHHHHHhhhhhhhhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHh
Q 039724          163 KAAAASALAFLCGSFVPLLPAILFARYIVRIVVIAIVTSLALVLFGGFGAHLGGSPIRVSAVRVLVGGWIAMGVTYGLLK  242 (251)
Q Consensus       163 ~sal~s~lsf~iggliPLlpy~~~~~~~~a~~~s~~~t~~aL~~~G~~ka~~~~~~~~~~~l~~l~~G~~aa~~~y~iG~  242 (251)
                      ++|++||+||++|+++||+||+|..+...++.+|+++++++|+++|++|+++++.||||+++||+++|++|++++|++|+
T Consensus       152 ~aAl~sflsF~ig~liPLLPf~~~~~~~~~~~~s~~~~~~~L~~lG~~~a~~s~~~~~~~~l~~~~~G~~aa~vsy~iG~  231 (234)
T cd02433         152 SAAVSSFLLFALGALIPVLPFLFGMSGLAALVLSVLLVGLALLATGAVTGLLSGRSPGISALRQLAIGGGAAAVTYLLGL  231 (234)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999987655567889999999999999999999999999999999999999999999999999


Q ss_pred             hhc
Q 039724          243 PFD  245 (251)
Q Consensus       243 l~~  245 (251)
                      +|+
T Consensus       232 l~~  234 (234)
T cd02433         232 LFG  234 (234)
T ss_pred             HcC
Confidence            985

Nodulin-21_like_2: This is a family of proteins closely related to nodulin-21, a plant nodule-specific protein that may be involved in symbiotic nitrogen fixation. This family is also related to CCC1, a yeast vacuole transmembrane protein that functions as an iron and manganese transporter.

>cd02432 Nodulin-21_like_1 Nodulin-21 and CCC1-related protein family

Probab=100.00  E-value=5.3e-55  Score=382.55  Aligned_cols=200  Identities=37%  Similarity=0.531  Sum_probs=179.1

Q ss_pred             hhhhhhHHHHHhhcCchHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHhhhhhhhhhhhhhHHHHHhhccchhhhhh
Q 039724           24 IQRGQWIRAAILGANDGLLSTTSLMLGVGAAKEDRRSMVLSGLAGALAGACSMAVGEFVSVSTQRDIQKATTSTNCERVM  103 (251)
Q Consensus        24 ~~~~~~lr~~V~G~~DGlvt~~alvaG~aga~~~~~~Vl~aGla~liAgaiSMa~G~YlS~kse~d~~~a~~~~~~~~~~  103 (251)
                      +.+.+|+|++|||+||||||+||+|+|++|++.|+.+|+++|+++++||++|||+|+|+|+|+|+|.+++          
T Consensus         2 ~~~~~~lr~~V~G~~DGlvs~~alvaG~aga~~~~~~Ill~Gla~l~Aga~SMa~G~yls~~sq~d~~~~----------   71 (218)
T cd02432           2 IERLNWLRAAVLGANDGIVSVAGLVVGVAAATASSFTILIAGLAGLVAGALSMAAGEYVSVSSQRDTEKA----------   71 (218)
T ss_pred             chhHhHHHHHHHhccchHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHH----------
Confidence            3578999999999999999999999999999999999999999999999999999999999999999998          


Q ss_pred             hhccccHHhhhhhhcCCCCCCCCCcccchHHHHHHHcCCCCCc---------------chhcc-cc-ccccCCChHHHHH
Q 039724          104 KLDITSVKETKLHETEPKLPTIFSPGRSPMMKVVIEDAKTFPS---------------SSELR-DD-LQEVLPNPFKAAA  166 (251)
Q Consensus       104 ~~~~~~e~E~~re~~e~~l~~~~~~e~~el~~i~~~~g~~~~~---------------~~~~e-~~-~~~~~~~P~~sal  166 (251)
                              |++||+|+  ++++|++|++|+.++|+++|+++++               .|+++ +. .+++..|||++|+
T Consensus        72 --------~~~~e~~~--i~~~p~~e~~el~~~~~~~G~~~~~a~~~a~~l~~~~~~~~~~~~e~g~~~~~~~~p~~aal  141 (218)
T cd02432          72 --------DIAKERRE--LAEDPEAELEELADIYEERGLSPELARQVADELMAKDALEAHARDELGITEGEYANPWQAAL  141 (218)
T ss_pred             --------HHHHHHHH--HHhCcHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhcChHHHHHHHhcCCCCCCCCCHHHHHH
Confidence                    55555553  6788999999999999999998532               34433 22 3455679999999


Q ss_pred             HHHHHHHHhhhhhhhhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHhhh
Q 039724          167 ASALAFLCGSFVPLLPAILFARYIVRIVVIAIVTSLALVLFGGFGAHLGGSPIRVSAVRVLVGGWIAMGVTYGLLKPF  244 (251)
Q Consensus       167 ~s~lsf~iggliPLlpy~~~~~~~~a~~~s~~~t~~aL~~~G~~ka~~~~~~~~~~~l~~l~~G~~aa~~~y~iG~l~  244 (251)
                      +||+||++|+++||+||+|.+. ..++++|+++++++|+++|++|+++++.||||+++||+++|++||++||++|++|
T Consensus       142 ~s~~sf~lg~liPllpy~~~~~-~~~~~~s~~~~~~aL~~~G~~~a~~~~~~~~~~~l~~~~iG~~aa~vty~iG~l~  218 (218)
T cd02432         142 ASAISFSVGALLPLLAILLAPA-AWKVPVTIIATLLALALTGYVSARLGGASVLRAILRNVIWGALAMALTYLIGRLF  218 (218)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcc-hHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence            9999999999999999987654 5568899999999999999999999999999999999999999999999999875

Nodulin-21_like_1: This is a family of proteins closely related to nodulin-21, a plant nodule-specific protein that may be involved in symbiotic nitrogen fixation. This family is also related to CCC1, a yeast vacuole transmembrane protein that functions as an iron and manganese transporter.

>cd02435 CCC1 CCC1

Probab=100.00  E-value=8.7e-54  Score=379.83  Aligned_cols=213  Identities=23%  Similarity=0.309  Sum_probs=184.6

Q ss_pred             CCCChhhhhhhhhhhhhhhhHHHHHhhcCchHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHhhhhhhhhhhhhhHH
Q 039724           10 CAPDHENLGMMKERIQRGQWIRAAILGANDGLLSTTSLMLGVGAAKEDRRSMVLSGLAGALAGACSMAVGEFVSVSTQRD   89 (251)
Q Consensus        10 ~~~h~~~~~~~~~~~~~~~~lr~~V~G~~DGlvt~~alvaG~aga~~~~~~Vl~aGla~liAgaiSMa~G~YlS~kse~d   89 (251)
                      +..|..+.|.+.| ..+.+|+|++|||+||||||+||+|+|++|++ ++++|+++|+++++||++|||+|+|+|+|+|+|
T Consensus         3 ~~~~~~~~~~~~~-~~~~~~lr~~VlG~nDGlvs~~alvaGvag~~-~~~~vll~Gla~liAgA~SMa~GeYlS~~sq~d   80 (241)
T cd02435           3 SSQHSTSSHSEKH-FTSPRIVRDIIIGLSDGLTVPFALTAGLSSLG-DTKLVITGGLAELAAGAISMGLGGYLAAKSERD   80 (241)
T ss_pred             cccCCCCCCcccc-ccccchHHHHHhhcchhhHHHHHHHHHHHhcC-CchHHHHHHHHHHHHHHHHHHHhhHHHhhhhHH
Confidence            3455555556666 46788999999999999999999999999987 599999999999999999999999999999999


Q ss_pred             HHHhhccchhhhhhhhccccHHhhhhhhcCCCCCCCCCcccch-HHHHHHHcCCCCC------------------cchhc
Q 039724           90 IQKATTSTNCERVMKLDITSVKETKLHETEPKLPTIFSPGRSP-MMKVVIEDAKTFP------------------SSSEL  150 (251)
Q Consensus        90 ~~~a~~~~~~~~~~~~~~~~e~E~~re~~e~~l~~~~~~e~~e-l~~i~~~~g~~~~------------------~~~~~  150 (251)
                      .+++                  |++||+|+  ++++|+.|++| +.++|+++|++++                  +.|++
T Consensus        81 ~~~~------------------~~~~e~~~--i~~~~~~E~~e~l~~~~~~~G~~~~~~~~~~~~~l~~~~~~~~~~~~~  140 (241)
T cd02435          81 HYQR------------------EHKRKQEA--VEASPSTEQEEIILYDLVQYGLVPLETAASTVTDLRKNPQALVDFLMR  140 (241)
T ss_pred             HHHH------------------HHHHHHHH--HhhCcHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhChhHHHHHHHH
Confidence            9988                  45555553  67889999999 9999999998753                  22333


Q ss_pred             c-cc-ccccCCChHHHHHHHHHHHHHhhhhhhhhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhCCCChh-----HHH
Q 039724          151 R-DD-LQEVLPNPFKAAAASALAFLCGSFVPLLPAILFARYIVRIVVIAIVTSLALVLFGGFGAHLGGSPIR-----VSA  223 (251)
Q Consensus       151 e-~~-~~~~~~~P~~sal~s~lsf~iggliPLlpy~~~~~~~~a~~~s~~~t~~aL~~~G~~ka~~~~~~~~-----~~~  223 (251)
                      + +. .+++..|||++|+++|+||++|+++||+||+|..+...++.+|+++++++|+++|++++++++.+++     +++
T Consensus       141 ~elg~~~~~~~~p~~aAl~s~lsf~lG~liPLlPy~~~~~~~~a~~~si~l~~~aL~ilG~~~s~~s~~~~~~~~~~~s~  220 (241)
T cd02435         141 FGLGLEEPDTSRALISALTIGLSYFIGGLIPLLPYFFVSTVGEALLLSVIVTLVALFVFGYVKTWFTGGWGGAGGGVWGA  220 (241)
T ss_pred             HhhCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCccchhhHHHH
Confidence            3 22 3445679999999999999999999999998876566789999999999999999999999999988     999


Q ss_pred             HHHHHHHHHHHHHHHHHHhhh
Q 039724          224 VRVLVGGWIAMGVTYGLLKPF  244 (251)
Q Consensus       224 l~~l~~G~~aa~~~y~iG~l~  244 (251)
                      +||+++|++||+++|+++++|
T Consensus       221 lrml~~G~~aa~vty~l~~~~  241 (241)
T cd02435         221 VQMLVVGGLAAGAAWGLVKLL  241 (241)
T ss_pred             HHHHHHHHHHHHHHHHHHhcC
Confidence            999999999999999999986

CCC1: This domain is present in the CCC1, an iron and manganese transporter of Saccharomyces cerevisiae. CCC1 is a transmembrane protein that is located in the vacuole and transfers the iron and manganese ions from the cytosol to the vacuole. This domain may be unique to certain fungi and plants.

>cd02434 Nodulin-21_like_3 Nodulin-21 and CCC1-related protein family

Probab=100.00  E-value=5.9e-53  Score=371.40  Aligned_cols=198  Identities=25%  Similarity=0.374  Sum_probs=176.5

Q ss_pred             hhHHHHHhhcCchHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHhhhhhhhhhhhhhHHHHHhhccchhhhhhhhcc
Q 039724           28 QWIRAAILGANDGLLSTTSLMLGVGAAKEDRRSMVLSGLAGALAGACSMAVGEFVSVSTQRDIQKATTSTNCERVMKLDI  107 (251)
Q Consensus        28 ~~lr~~V~G~~DGlvt~~alvaG~aga~~~~~~Vl~aGla~liAgaiSMa~G~YlS~kse~d~~~a~~~~~~~~~~~~~~  107 (251)
                      +|+|++|||+||||+|+||+|+|++|++.|+.+|+++|+++++||++|||+|+|+|+|+|+|.+++              
T Consensus         1 ~~lr~~V~G~~DGlvt~~alvaG~aga~~~~~~ili~Gla~liAga~SMa~GeYls~kse~d~~~~--------------   66 (225)
T cd02434           1 EYLKSIVFGGLDGIVTIFAIVAGVVGAGLSPFVILIIGFANLLADGISMAAGEYVSTKAERDFLHS--------------   66 (225)
T ss_pred             CcHHHHhhcchhhhHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH--------------
Confidence            589999999999999999999999999999999999999999999999999999999999999988              


Q ss_pred             ccHHhhhhhhcCCCCCCCCCcccchHHHHHHHcCCCCC-----------------cchhcc-cc-cccc-CCChHHHHHH
Q 039724          108 TSVKETKLHETEPKLPTIFSPGRSPMMKVVIEDAKTFP-----------------SSSELR-DD-LQEV-LPNPFKAAAA  167 (251)
Q Consensus       108 ~~e~E~~re~~e~~l~~~~~~e~~el~~i~~~~g~~~~-----------------~~~~~e-~~-~~~~-~~~P~~sal~  167 (251)
                          |++||+||  ++++|+.|++||.++|+++|++++                 ++||++ +. .+++ ..|||++|++
T Consensus        67 ----e~~re~~~--i~~~pe~E~~el~~iy~~kG~~~~~a~~v~~~l~~~~~~~~~~m~~~elg~~~~~~~~~P~~aAl~  140 (225)
T cd02434          67 ----EKKREEWE--IENYPEGEKSEMVEIYSLKGLSEEVADQVVELLSKYRKLFVDIMMTEELGLIPDDELPSPLKTALV  140 (225)
T ss_pred             ----HHHHHHHH--HHhCcHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCchhhHHHHHHhhccCCCCcccCCHHHHHHH
Confidence                66777664  778999999999999999998753                 234443 32 2233 4799999999


Q ss_pred             HHHHHHHhhhhhhhhHHhhhh------hhHHHHHHHHH-HHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHHHHH
Q 039724          168 SALAFLCGSFVPLLPAILFAR------YIVRIVVIAIV-TSLALVLFGGFGAHLGGSPIRVSAVRVLVGGWIAMGVTYGL  240 (251)
Q Consensus       168 s~lsf~iggliPLlpy~~~~~------~~~a~~~s~~~-t~~aL~~~G~~ka~~~~~~~~~~~l~~l~~G~~aa~~~y~i  240 (251)
                      ||+||++|+++||+||++..+      ....+.+|+++ ++++|+++|++|+++++.||+|+++||+++|++|++++|++
T Consensus       141 sflsf~~ggliPLlp~~~~~~~~~~~~~~~~~~~s~~~~~~~~L~~~G~~~~~~~~~~~~~~~l~~~~~G~~aa~~ty~i  220 (225)
T cd02434         141 TFLSFLVFGIIPLLPYLLGLYYYSQKEIDSVFALSILIFVAFTLFLLGSFKSKLYNGKWIISGIIMLINGAASGGVSFFL  220 (225)
T ss_pred             HHHHHHHHHHHHHHHHHHcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999987653      24567888888 99999999999999999999999999999999999999999


Q ss_pred             Hhhhc
Q 039724          241 LKPFD  245 (251)
Q Consensus       241 G~l~~  245 (251)
                      |++|.
T Consensus       221 G~l~~  225 (225)
T cd02434         221 GVLFT  225 (225)
T ss_pred             HhhcC
Confidence            99874

Nodulin-21_like_3: This is a family of proteins closely related to nodulin-21, a plant nodule-specific protein that may be involved in symbiotic nitrogen fixation. This family is also related to CCC1, a yeast vacuole transmembrane protein that functions as an iron and manganese transporter.

>PF01988 VIT1: VIT family; InterPro: IPR008217 Proteins containing this entry have no known function and are predicted to be integral membrane proteins

Probab=100.00  E-value=6.1e-51  Score=355.64  Aligned_cols=195  Identities=34%  Similarity=0.492  Sum_probs=176.5

Q ss_pred             hHHHHHhhcCchHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHhhhhhhhhhhhhhHHHHHhhccchhhhhhhhccc
Q 039724           29 WIRAAILGANDGLLSTTSLMLGVGAAKEDRRSMVLSGLAGALAGACSMAVGEFVSVSTQRDIQKATTSTNCERVMKLDIT  108 (251)
Q Consensus        29 ~lr~~V~G~~DGlvt~~alvaG~aga~~~~~~Vl~aGla~liAgaiSMa~G~YlS~kse~d~~~a~~~~~~~~~~~~~~~  108 (251)
                      |+|++|||+|||++|++++|+|+++++.|+.+|+++|+++++||++|||+|+|+|+|+|+|++++               
T Consensus         1 ~~r~~V~G~~DGlv~~~~lv~G~a~a~~~~~~vl~~gla~~iAga~SMa~G~yls~~se~~~~~~---------------   65 (213)
T PF01988_consen    1 WLRDAVFGANDGLVTTFGLVAGVAGAGVSSSVVLLAGLAGLIAGAISMAVGEYLSVKSERDLYEA---------------   65 (213)
T ss_pred             ChHHHHhhccchHHHHHHHHHHHHHcccChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHH---------------
Confidence            89999999999999999999999999999999999999999999999999999999999999998               


Q ss_pred             cHHhhhhhhcCCCCCCCCCcccchHHHHHHHcCCCCCc----------------chhccc--cccccCCChHHHHHHHHH
Q 039724          109 SVKETKLHETEPKLPTIFSPGRSPMMKVVIEDAKTFPS----------------SSELRD--DLQEVLPNPFKAAAASAL  170 (251)
Q Consensus       109 ~e~E~~re~~e~~l~~~~~~e~~el~~i~~~~g~~~~~----------------~~~~e~--~~~~~~~~P~~sal~s~l  170 (251)
                         |++||+||  ++++|++|++|+.++|+++|++.++                .|++++  ..+++..+||++|+++|+
T Consensus        66 ---e~~re~~e--~~~~pe~e~~el~~iy~~~Gl~~~~a~~i~~~l~~~~~~~~~m~~ee~g~~~~~~~~p~~~al~~~~  140 (213)
T PF01988_consen   66 ---EREREEWE--LENNPEEEKEELVEIYRAKGLSEEDAEEIAEELSKDKDALDFMMREELGLSPEEEESPWKAALATFL  140 (213)
T ss_pred             ---HhHHHHHH--HHhChHhHHHHHHHHHHHCCCCHHHHHHHHHHHHhCchHHHHHHhhhccCCccccchHHHHHHHHHH
Confidence               56666664  7789999999999999999998532                233332  244667899999999999


Q ss_pred             HHHHhhhhhhhhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHhh
Q 039724          171 AFLCGSFVPLLPAILFARYIVRIVVIAIVTSLALVLFGGFGAHLGGSPIRVSAVRVLVGGWIAMGVTYGLLKP  243 (251)
Q Consensus       171 sf~iggliPLlpy~~~~~~~~a~~~s~~~t~~aL~~~G~~ka~~~~~~~~~~~l~~l~~G~~aa~~~y~iG~l  243 (251)
                      ||++|+++|++||++.+....++.+|+++++++|+++|++|++++++||+|+++||+++|+++++++|++|+|
T Consensus       141 sf~lg~liPllp~~~~~~~~~a~~~s~~~~~~~L~~~G~~~a~~~~~~~~~~~l~~~~~G~~aa~~~~~iG~L  213 (213)
T PF01988_consen  141 SFILGGLIPLLPYFFLPSVSEAFIASIAVTILALFILGYFKARISGQSWWRSGLEMLLIGLIAAAVTYLIGYL  213 (213)
T ss_pred             HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence            9999999999999987512378999999999999999999999999999999999999999999999999986

They include the Ccc1 protein from Saccharomyces cerevisiae (Baker's yeast) (P47818 from SWISSPROT) that may have a role in regulating calcium levels [].

>KOG4473 consensus Uncharacterized membrane protein [Function unknown]

Probab=100.00  E-value=9.8e-48  Score=329.35  Aligned_cols=207  Identities=45%  Similarity=0.701  Sum_probs=177.9

Q ss_pred             hhhhhhhhhhhHHHHHhhcCchHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHhhhhhhhhhhhhhHHHHHhhccch
Q 039724           19 MMKERIQRGQWIRAAILGANDGLLSTTSLMLGVGAAKEDRRSMVLSGLAGALAGACSMAVGEFVSVSTQRDIQKATTSTN   98 (251)
Q Consensus        19 ~~~~~~~~~~~lr~~V~G~~DGlvt~~alvaG~aga~~~~~~Vl~aGla~liAgaiSMa~G~YlS~kse~d~~~a~~~~~   98 (251)
                      ++.++.++.+|+|++|+|.||||++++++.+|+.++..|.++++++|+|+++|||+|||+|+|+|+|||+|++.+..   
T Consensus        24 ~~~~~~~~~~wlra~vlGanDGL~s~~sL~~Gv~a~~advki~l~~GfAglvaGA~SMaiGeyvsv~Sq~D~e~ae~---  100 (247)
T KOG4473|consen   24 KTFDYFKRAQWLRAAVLGANDGLVSPASLMMGVGAAKADVKIMLLTGFAGLVAGACSMAIGEYVSVKSQYDIEVAEV---  100 (247)
T ss_pred             hhhhhHHHHHHHHHHHhccccCcccHHHHHHhhhhccCCeeEeeehhHHHHHhhhHHHhhccceeecchhhHHHHHH---
Confidence            44556789999999999999999999999999999999999999999999999999999999999999999999933   


Q ss_pred             hhhhhhhccccHHhhhhhhcCCCCCCCCCcccchHHHHHHHcCCC---------------CCcchhcccc--ccccCCCh
Q 039724           99 CERVMKLDITSVKETKLHETEPKLPTIFSPGRSPMMKVVIEDAKT---------------FPSSSELRDD--LQEVLPNP  161 (251)
Q Consensus        99 ~~~~~~~~~~~e~E~~re~~e~~l~~~~~~e~~el~~i~~~~g~~---------------~~~~~~~e~~--~~~~~~~P  161 (251)
                                     |+|++|  ...+++-|.+|+.+||.....+               +.|.+++++.  ......+|
T Consensus       101 ---------------q~erre--~~a~~~~e~~E~~~Il~g~~~~E~lpvi~alq~~p~~~ldf~~R~elGl~~p~~~~p  163 (247)
T KOG4473|consen  101 ---------------QMERRE--FYANSNLENDEIADILLGEEEKEELPVIKALQRTPELMLDFIIRYELGLDEPAENRP  163 (247)
T ss_pred             ---------------HHHHHH--hhccchhhhHHHHHHhcCCCchhccchhHHhhhChHHHHHHHHHhhcccCCCCCCch
Confidence                           333322  3345666777777777643332               2234544432  33456799


Q ss_pred             HHHHHHHHHHHHHhhhhhhhhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHHHHHH
Q 039724          162 FKAAAASALAFLCGSFVPLLPAILFARYIVRIVVIAIVTSLALVLFGGFGAHLGGSPIRVSAVRVLVGGWIAMGVTYGLL  241 (251)
Q Consensus       162 ~~sal~s~lsf~iggliPLlpy~~~~~~~~a~~~s~~~t~~aL~~~G~~ka~~~~~~~~~~~l~~l~~G~~aa~~~y~iG  241 (251)
                      .++|++++++|.+||++||+||+|++++..+...+++++.++||.|||+++++++.+..|+++|++++|++|+++||+++
T Consensus       164 ~qaA~asa~afslGg~vPLl~~~fi~~~~~~~v~~vv~~~~aL~~fG~~ga~lg~ak~vrs~~r~vv~G~lAmaatf~l~  243 (247)
T KOG4473|consen  164 LQAAAASALAFSLGGIVPLLPAAFVKDYKVRIVVSVVATTFALFMFGYVGAHLGKAKVVRSSVRVVVGGWLAMAATFGLT  243 (247)
T ss_pred             HHHHHHHHHHHHhccHHhhhHHHhhhhhhhhhhhHHHHHHHHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999988899999999999999999999999999999999999999999999999999


Q ss_pred             hhhc
Q 039724          242 KPFD  245 (251)
Q Consensus       242 ~l~~  245 (251)
                      ++++
T Consensus       244 Klig  247 (247)
T KOG4473|consen  244 KLIG  247 (247)
T ss_pred             HhcC
Confidence            9975

>cd02431 Ferritin_CCC1_C CCC1-related domain of ferritin

Probab=100.00  E-value=3.1e-43  Score=291.64  Aligned_cols=149  Identities=24%  Similarity=0.392  Sum_probs=140.3

Q ss_pred             HHHHHhhcCchHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHhhhhhhhhhhhhhHHHHHhhccchhhhhhhhcccc
Q 039724           30 IRAAILGANDGLLSTTSLMLGVGAAKEDRRSMVLSGLAGALAGACSMAVGEFVSVSTQRDIQKATTSTNCERVMKLDITS  109 (251)
Q Consensus        30 lr~~V~G~~DGlvt~~alvaG~aga~~~~~~Vl~aGla~liAgaiSMa~G~YlS~kse~d~~~a~~~~~~~~~~~~~~~~  109 (251)
                      +|++|||+|||++|++++++|++|+..|+.+|+++|+++++||++||++|||+|+|+|+|.+++                
T Consensus         1 ~r~~V~G~~DGlvt~~~~v~G~aga~~~~~~i~~~Gl~~~iA~a~SMa~G~YlS~kse~d~~~~----------------   64 (149)
T cd02431           1 VGDFVLGLNDALVEITGALAGLTGAINNTILVGLSGLIVGIAAALSMAIGAYLSTKSESGVKES----------------   64 (149)
T ss_pred             CchhhccccchHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhHHhc----------------
Confidence            5899999999999999999999999999999999999999999999999999999998764321                


Q ss_pred             HHhhhhhhcCCCCCCCCCcccchHHHHHHHcCCCCCcchhccccccccCCChHHHHHHHHHHHHHhhhhhhhhHHhhhhh
Q 039724          110 VKETKLHETEPKLPTIFSPGRSPMMKVVIEDAKTFPSSSELRDDLQEVLPNPFKAAAASALAFLCGSFVPLLPAILFARY  189 (251)
Q Consensus       110 e~E~~re~~e~~l~~~~~~e~~el~~i~~~~g~~~~~~~~~e~~~~~~~~~P~~sal~s~lsf~iggliPLlpy~~~~~~  189 (251)
                                                                        |||++|++||+||++|+++|++||++.++.
T Consensus        65 --------------------------------------------------~p~~~al~s~~sf~~g~~iPllp~~~~~~~   94 (149)
T cd02431          65 --------------------------------------------------NPVKSALYTGIAYIIGVVIPILPYLLLSSV   94 (149)
T ss_pred             --------------------------------------------------chHHHHHHHHHHHHHHHHHHHHHHHHccch
Confidence                                                              799999999999999999999999887655


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHhhh
Q 039724          190 IVRIVVIAIVTSLALVLFGGFGAHLGGSPIRVSAVRVLVGGWIAMGVTYGLLKPF  244 (251)
Q Consensus       190 ~~a~~~s~~~t~~aL~~~G~~ka~~~~~~~~~~~l~~l~~G~~aa~~~y~iG~l~  244 (251)
                      ..++.++++++.++|+++|++++++++++|+|+++||+++|+++++++|++|+++
T Consensus        95 ~~a~~~s~~~~~~~L~~~G~~~~~~s~~~~~~~~l~~~~~G~~aa~~t~~iG~l~  149 (149)
T cd02431          95 YLALALSVTLAVLAILIFNFYISVASGISFRKKFIEMAGLALGAAFISFLLGYLL  149 (149)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence            6789999999999999999999999999999999999999999999999999875

Ferritin_CCC1_like_C: The proteins of this family contain two domains. This is the C-terminal domain that is closely related to the CCC1, a vacuole transmembrane protein functioning as an iron and manganese transporter. The N-terminal domain is similar to ferritin-like diiron-carboxylate proteins, which are involved in a variety of iron ion related functions, such as iron storage and regulation, mono-oxygenation, and reactive radical production. This family may be unique to certain bacteria and archaea.

>cd02437 CCC1_like_1 CCC1-related protein family

Probab=100.00  E-value=1.6e-39  Score=276.03  Aligned_cols=174  Identities=20%  Similarity=0.235  Sum_probs=144.8

Q ss_pred             hhHHHHHhhcCchHHHHHHHHHHhhhccC-ChhHHHHHHHHHHHHHHHhhhhhhhhhhhhhHHHHHhhccchhhhhhhhc
Q 039724           28 QWIRAAILGANDGLLSTTSLMLGVGAAKE-DRRSMVLSGLAGALAGACSMAVGEFVSVSTQRDIQKATTSTNCERVMKLD  106 (251)
Q Consensus        28 ~~lr~~V~G~~DGlvt~~alvaG~aga~~-~~~~Vl~aGla~liAgaiSMa~G~YlS~kse~d~~~a~~~~~~~~~~~~~  106 (251)
                      +++|++|||+|||++|++++++|+++++. |+++|+++|+++++|+++||++|+|+|+|+|+    +             
T Consensus         1 ~~~r~~V~G~~DGivs~~~~v~G~~~a~~~~~~~i~~~Gla~~iA~a~Sma~g~yvs~~~~~----~-------------   63 (175)
T cd02437           1 STIRYGIYGLIDGSLSTLGVVFGASLAFDLDPKIIIAAGLGGAFALGISNGLGAAVAEEGSL----R-------------   63 (175)
T ss_pred             CchHHHhhccccchHHHHHHHHHHHHhccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----H-------------
Confidence            36899999999999999999999999988 99999999999999999999999999987642    1             


Q ss_pred             cccHHhhhhhhcCCCCCCCCCcccchHHHHHHHcCCCCCcchhccccccccCCChHHHHHHHHHHHHHhhhhhhhhHHhh
Q 039724          107 ITSVKETKLHETEPKLPTIFSPGRSPMMKVVIEDAKTFPSSSELRDDLQEVLPNPFKAAAASALAFLCGSFVPLLPAILF  186 (251)
Q Consensus       107 ~~~e~E~~re~~e~~l~~~~~~e~~el~~i~~~~g~~~~~~~~~e~~~~~~~~~P~~sal~s~lsf~iggliPLlpy~~~  186 (251)
                           |+.++++      +++.+.+++            +.|++++  .....+||+++++++++|++|+++||+||++.
T Consensus        64 -----~~~~~~~------~~~~~~~~~------------~~~~~~e--~~~~~~~~~~al~sgls~~~G~llPLlp~~~~  118 (175)
T cd02437          64 -----GMLEEKE------KILLRLEQM------------LTSTREE--LAIRKADLPSGLIQGISTTLGGLLPLLPFLPF  118 (175)
T ss_pred             -----HHHHHHh------ChhhhHHHH------------HHHHHHH--hccccChHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence                 1111111      112222222            2233333  23447999999999999999999999999875


Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHhhh
Q 039724          187 ARYIVRIVVIAIVTSLALVLFGGFGAHLGGSPIRVSAVRVLVGGWIAMGVTYGLLKPF  244 (251)
Q Consensus       187 ~~~~~a~~~s~~~t~~aL~~~G~~ka~~~~~~~~~~~l~~l~~G~~aa~~~y~iG~l~  244 (251)
                      + ...++.+++++++++|+++|++|+++++.||+++++|++++|+++++++|++|++|
T Consensus       119 ~-~~~a~~~si~~~~~~L~~~G~~~~~~~~~~~~~~~~r~~~~g~la~~~t~~vg~l~  175 (175)
T cd02437         119 D-LWLAAGIAVAIVLAILFILGLVIGKISKINVAISFVWAVGMVITGISLVFSVGKLF  175 (175)
T ss_pred             h-hHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            3 56789999999999999999999999999999999999999999999999999986

CCC1_like_1: This is a protein family closely related to CCC1, a family of proteins involved in iron and manganese transport. Yeast CCC1 is a vacuole transmembrane protein responsible for the iron and manganese accumulation in vacuole.

>TIGR00267 conserved hypothetical protein TIGR00267

Probab=100.00  E-value=2.9e-39  Score=273.19  Aligned_cols=168  Identities=21%  Similarity=0.367  Sum_probs=139.2

Q ss_pred             HHHHhhcCchHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHhhhhhhhhhhhhhHHHHHhhccchhhhhhhhccccH
Q 039724           31 RAAILGANDGLLSTTSLMLGVGAAKEDRRSMVLSGLAGALAGACSMAVGEFVSVSTQRDIQKATTSTNCERVMKLDITSV  110 (251)
Q Consensus        31 r~~V~G~~DGlvt~~alvaG~aga~~~~~~Vl~aGla~liAgaiSMa~G~YlS~kse~d~~~a~~~~~~~~~~~~~~~~e  110 (251)
                      |++|+|+|||++|++++|+|++++ .++.+|+++|+++++|+++||++|+|++.|+|++.++.+.               
T Consensus         1 R~~VlG~~DGils~~giv~G~~~~-~~~~~i~~~Gla~~vA~a~Sma~GeYv~e~ae~~~e~~el---------------   64 (169)
T TIGR00267         1 RYVVRGTIDGTLSALGVVGGASGS-VDNYVIILAGLGGGVANGMSNAFGAFTAERAEEEREMREL---------------   64 (169)
T ss_pred             CceeeccchHHHHHHHHHHHhhcc-CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------
Confidence            789999999999999999997555 5777999999999999999999999998887765333311               


Q ss_pred             HhhhhhhcCCCCCCCCCcccchHHHHHHHcCCCCCcchhccccccccCCChHHHHHHHHHHHHHhhhhhhhhHHhhhhhh
Q 039724          111 KETKLHETEPKLPTIFSPGRSPMMKVVIEDAKTFPSSSELRDDLQEVLPNPFKAAAASALAFLCGSFVPLLPAILFARYI  190 (251)
Q Consensus       111 ~E~~re~~e~~l~~~~~~e~~el~~i~~~~g~~~~~~~~~e~~~~~~~~~P~~sal~s~lsf~iggliPLlpy~~~~~~~  190 (251)
                       |++                     .|+++|++++..     ..+....|||++|++++++|++|+++|++||++ .+..
T Consensus        65 -e~~---------------------~~~~~g~~~~~~-----~~~~~~~~p~~aAl~sgls~~~g~liPllp~~~-~~~~  116 (169)
T TIGR00267        65 -EKS---------------------MLMDEGKLDDTI-----IYKQARRRVYMSGFIDGFSTFMGSFVPVLPFLV-FDRM  116 (169)
T ss_pred             -HHH---------------------HHHhcCCCchhh-----HHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHH-cchh
Confidence             111                     123334433221     112233599999999999999999999999987 5567


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHh
Q 039724          191 VRIVVIAIVTSLALVLFGGFGAHLGGSPIRVSAVRVLVGGWIAMGVTYGLLK  242 (251)
Q Consensus       191 ~a~~~s~~~t~~aL~~~G~~ka~~~~~~~~~~~l~~l~~G~~aa~~~y~iG~  242 (251)
                      .++.+++++++++|+++|++++++++.||+|+++||+++|+++++++|++|.
T Consensus       117 ~a~~~s~~~~~~~L~ilG~~~a~~s~~~~~~s~lr~~~~G~~aa~it~~iG~  168 (169)
T TIGR00267       117 TATIVTVLLTLIALLVLGVYLGRISRENILISSLKMVVIGLLVAVVSLLIEG  168 (169)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHcC
Confidence            7999999999999999999999999999999999999999999999999974

This family is represented in three of the first four completed archaeal genomes, with two members in A. fulgidus.

>cd02436 Nodulin-21 Nodulin-21

Probab=100.00  E-value=3.6e-38  Score=258.59  Aligned_cols=151  Identities=44%  Similarity=0.602  Sum_probs=128.6

Q ss_pred             hhHHHHHhhcCchHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHhhhhhhhhhhhhhHHHHHhhccchhhhhhhhcc
Q 039724           28 QWIRAAILGANDGLLSTTSLMLGVGAAKEDRRSMVLSGLAGALAGACSMAVGEFVSVSTQRDIQKATTSTNCERVMKLDI  107 (251)
Q Consensus        28 ~~lr~~V~G~~DGlvt~~alvaG~aga~~~~~~Vl~aGla~liAgaiSMa~G~YlS~kse~d~~~a~~~~~~~~~~~~~~  107 (251)
                      +|+|++|||+||||||++++++|+++++.|+.+|+++|+++++||++||++|||+|++||+|.+++.+            
T Consensus         1 ~~lra~VlGanDGivs~~alv~Gvaga~~~~~~illaGla~lvAga~SMa~GeYvSv~sq~d~e~a~i------------   68 (152)
T cd02436           1 QWLRAAVLGANDGLVSVASLMLGVGAVCADEHAMLLSGLAGLVAGACPMAIGEFVRVYRQYRRPRAAR------------   68 (152)
T ss_pred             CcHHHHHhhcchhHHHHHHHHHHHHHhcCChhHHHHHHHHHHHhhHHHHhhcchhhcccccchHHHHH------------
Confidence            59999999999999999999999999999999999999999999999999999999999999999933            


Q ss_pred             ccHHhhhhhhcCCCCCCCCCcccchHHHHHHHcCCCCCcchhccccccccCCChHHHHHHHHHHHHHhhhhhhhhHHhhh
Q 039724          108 TSVKETKLHETEPKLPTIFSPGRSPMMKVVIEDAKTFPSSSELRDDLQEVLPNPFKAAAASALAFLCGSFVPLLPAILFA  187 (251)
Q Consensus       108 ~~e~E~~re~~e~~l~~~~~~e~~el~~i~~~~g~~~~~~~~~e~~~~~~~~~P~~sal~s~lsf~iggliPLlpy~~~~  187 (251)
                          +++|++    +                ++|++++.   +.+..+++..|||++|++|+++|.+|+++||++++|+.
T Consensus        69 ----~~e~~e----l----------------~rGl~~~l---elgi~~~~~~~P~qAA~aSa~sF~~Ga~lPll~~~fl~  121 (152)
T cd02436          69 ----CLRGRN----R----------------ARGPAPDS---EPEGLRRQAPSPSSAATASALSFAAGALFPLLAAWFVA  121 (152)
T ss_pred             ----HHHHHH----h----------------hcCCChhh---hcCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence                222211    1                33333322   23334566789999999999999999999999999666


Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Q 039724          188 RYIVRIVVIAIVTSLALVLFGGFGAHLGGSP  218 (251)
Q Consensus       188 ~~~~a~~~s~~~t~~aL~~~G~~ka~~~~~~  218 (251)
                      +..++ ..+++++.++|+++|++.+++++.+
T Consensus       122 p~~~~-~~~~~~~~~aL~~~G~~~A~~g~a~  151 (152)
T cd02436         122 SYASR-RVLPPQSSAPAAPPGRSPATVTASS  151 (152)
T ss_pred             ccchh-hHHHHHHHHHHHHHhHHHHHhcCCC
Confidence            66666 8889999999999999999999876

Nodulin-21: This is a family of proteins that may be unique to certain plants. The family member in soybean is found to be nodule-specific and is abundant during nodule development. The proteins of this family thus may play a role in symbiotic nitrogen fixation.

>cd01059 CCC1_like CCC1-related family of proteins

Probab=100.00  E-value=4.4e-35  Score=241.34  Aligned_cols=142  Identities=49%  Similarity=0.733  Sum_probs=133.3

Q ss_pred             HHHHHhhcCchHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHhhhhhhhhhhhhhHHHHHhhccchhhhhhhhcccc
Q 039724           30 IRAAILGANDGLLSTTSLMLGVGAAKEDRRSMVLSGLAGALAGACSMAVGEFVSVSTQRDIQKATTSTNCERVMKLDITS  109 (251)
Q Consensus        30 lr~~V~G~~DGlvt~~alvaG~aga~~~~~~Vl~aGla~liAgaiSMa~G~YlS~kse~d~~~a~~~~~~~~~~~~~~~~  109 (251)
                      +|++|||+|||++|++++++|++++..|+++|+++|+++++|+++||++|||+|+|+|+|                    
T Consensus         1 ~r~~v~G~~DGivs~~~~v~G~~~a~~~~~~il~~Gl~~~ia~a~Sma~g~yls~~~e~~--------------------   60 (143)
T cd01059           1 LRAAVLGANDGLVSTFALVAGVAAAGDSTKAILLAGLAGLVAGAISMAAGEYVSVKSQRD--------------------   60 (143)
T ss_pred             CccceecccchhHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHh--------------------
Confidence            589999999999999999999999999999999999999999999999999999977520                    


Q ss_pred             HHhhhhhhcCCCCCCCCCcccchHHHHHHHcCCCCCcchhccccccccCCChHHHHHHHHHHHHHhhhhhhhhHHhhhhh
Q 039724          110 VKETKLHETEPKLPTIFSPGRSPMMKVVIEDAKTFPSSSELRDDLQEVLPNPFKAAAASALAFLCGSFVPLLPAILFARY  189 (251)
Q Consensus       110 e~E~~re~~e~~l~~~~~~e~~el~~i~~~~g~~~~~~~~~e~~~~~~~~~P~~sal~s~lsf~iggliPLlpy~~~~~~  189 (251)
                                                                           ++|+++++||++|+++|++||++..+.
T Consensus        61 -----------------------------------------------------~~al~~~~s~~~g~lipllp~~~~~~~   87 (143)
T cd01059          61 -----------------------------------------------------KAALASGLSFILGGLLPLLPYLLLPAG   87 (143)
T ss_pred             -----------------------------------------------------HHHHHHHHHHHHHHHHHHHHHHHhcch
Confidence                                                                 899999999999999999999887654


Q ss_pred             hHHHHHHHHH-HHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHhhh
Q 039724          190 IVRIVVIAIV-TSLALVLFGGFGAHLGGSPIRVSAVRVLVGGWIAMGVTYGLLKPF  244 (251)
Q Consensus       190 ~~a~~~s~~~-t~~aL~~~G~~ka~~~~~~~~~~~l~~l~~G~~aa~~~y~iG~l~  244 (251)
                      ..++..++++ +.++|+++|++|+|+++++|+++++||+.+|+++++++|++|+++
T Consensus        88 ~~a~~~si~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~g~~~a~i~~~~g~l~  143 (143)
T cd01059          88 SLALAVSVALVVALALFLLGAFVAKLGGAKKIRAALRMVVLGLLAAALTYLLGRLF  143 (143)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            6788899998 999999999999999999999999999999999999999999875

CCC1_like: This protein family includes the proteins related to CCC1, a yeast vacuole transmembrane protein responsible for the iron and manganese transport from the cytosol into vacuole. It also includes the proteins similar to nodulin-21, a plant nodule-specific protein that may be involved in symbiotic nitrogen fixation.

>COG1814 Uncharacterized membrane protein [Function unknown]

Probab=99.96  E-value=5.3e-28  Score=213.48  Aligned_cols=206  Identities=30%  Similarity=0.421  Sum_probs=170.7

Q ss_pred             hhhhhhhhhHHHHHhhcCchHHHHHHHHHHhhhcc-CChhHHHHHHHHHHHHHHHhhhhhhhhhhhhhHHHHHhhccchh
Q 039724           21 KERIQRGQWIRAAILGANDGLLSTTSLMLGVGAAK-EDRRSMVLSGLAGALAGACSMAVGEFVSVSTQRDIQKATTSTNC   99 (251)
Q Consensus        21 ~~~~~~~~~lr~~V~G~~DGlvt~~alvaG~aga~-~~~~~Vl~aGla~liAgaiSMa~G~YlS~kse~d~~~a~~~~~~   99 (251)
                      .|..++.+|+|..++|.|||++++..++.|+.... .+...++..|+++.+.+++||..|+|+|+++|.|...+..+   
T Consensus         3 ~~~~~~~~~~~~~~l~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~al~mi~ge~~s~~~~~~~~~~~~~---   79 (229)
T COG1814           3 KHYINRINIFRASVLGANDGLVSTAKLLEGVEAASIAAYLKLLIAGFAGLISGALSMIIGEYLSVSSQLDAELAEIQ---   79 (229)
T ss_pred             ccHHHHHHHHHHHHHHHhhhhHHHHHHHHhhhhhhhhHHHHHHHhhhhHHHHHHHHHHHhhhhhHHHHHhhhhhhhH---
Confidence            45678899999999999999999999999999886 55677777779999999999999999999999998887331   


Q ss_pred             hhhhhhccccHHhhhhhhcCCCCCCCCCcccchHHHHHHHcCCCCCcc-----h-h----c------c-ccccccCCChH
Q 039724          100 ERVMKLDITSVKETKLHETEPKLPTIFSPGRSPMMKVVIEDAKTFPSS-----S-E----L------R-DDLQEVLPNPF  162 (251)
Q Consensus       100 ~~~~~~~~~~e~E~~re~~e~~l~~~~~~e~~el~~i~~~~g~~~~~~-----~-~----~------e-~~~~~~~~~P~  162 (251)
                                     +++.  .....+.-+.+++..+|..+|.+.+..     . +    .      + ........+|+
T Consensus        80 ---------------~~~~--~~~~~~g~~~~~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  142 (229)
T COG1814          80 ---------------KERR--LLALSLGVADALVEILGALRGESEEEAREVAEQLLQGLIVGVHGRLSMGIGAYLSSRPL  142 (229)
T ss_pred             ---------------HHHH--HHhcCcchhHHHHHHHHHHcCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHhhhhhH
Confidence                           1111  123456677788888888888875421     0 0    0      0 01112225899


Q ss_pred             HHH-HHHHHHHHHhhhhhhhhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHHHHHHHHHHHHHHHH
Q 039724          163 KAA-AASALAFLCGSFVPLLPAILFARYIVRIVVIAIVTSLALVLFGGFGAHLGGSPIRVSAVRVLVGGWIAMGVTYGLL  241 (251)
Q Consensus       163 ~sa-l~s~lsf~iggliPLlpy~~~~~~~~a~~~s~~~t~~aL~~~G~~ka~~~~~~~~~~~l~~l~~G~~aa~~~y~iG  241 (251)
                      .++ ++++++|++|+++|++||++.++...++++|+++++++|+++|++++++++.+++++++|++..|++++.++|++|
T Consensus       143 ~~~~l~sg~s~~~G~l~Pllp~~~~~~~~~al~~si~~~~l~L~ilG~~~a~~s~~~~~~~~lr~v~~gl~aa~lt~~vg  222 (229)
T COG1814         143 LAATLSSGISFIIGALLPLLPFFFLPDVLSALIASIILALLALAILGAVLARLSGASIAKSILRMVLLGLLAALLTYLVG  222 (229)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999 7999999999999999999998877788999999999999999999999999999999999999999999999999


Q ss_pred             hhhcc
Q 039724          242 KPFDS  246 (251)
Q Consensus       242 ~l~~~  246 (251)
                      ++++.
T Consensus       223 ~l~~~  227 (229)
T COG1814         223 RLFGI  227 (229)
T ss_pred             HHHHh
Confidence            99874

>COG1814 Uncharacterized membrane protein [Function unknown]

Probab=96.36  E-value=0.059  Score=47.74  Aligned_cols=146  Identities=14%  Similarity=0.128  Sum_probs=88.0

Q ss_pred             hhhHHHHHhhcCchHHHHHHHHHHhhhccCChhHHH-HHHHHHHHHHHHhhhhhhhhhhhhhHHHHHhhccchhhhhhhh
Q 039724           27 GQWIRAAILGANDGLLSTTSLMLGVGAAKEDRRSMV-LSGLAGALAGACSMAVGEFVSVSTQRDIQKATTSTNCERVMKL  105 (251)
Q Consensus        27 ~~~lr~~V~G~~DGlvt~~alvaG~aga~~~~~~Vl-~aGla~liAgaiSMa~G~YlS~kse~d~~~a~~~~~~~~~~~~  105 (251)
                      .++..+..+|.+||++..++...|......++.... ..++.....+..+|+++.|++.+   +..              
T Consensus        81 ~~~~~~~~~g~~~~~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~~--------------  143 (229)
T COG1814          81 ERRLLALSLGVADALVEILGALRGESEEEAREVAEQLLQGLIVGVHGRLSMGIGAYLSSR---PLL--------------  143 (229)
T ss_pred             HHHHHhcCcchhHHHHHHHHHHcCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHhhhh---hHH--------------
Confidence            456677777777777777777777777765554444 66777777777777777776510   000              


Q ss_pred             ccccHHhhhhhhcCCCCCCCCCcccchHHHHHHHcCCCCCcchhccccccccCCChHHHHHHHHHHHHHhhhhhhhhHHh
Q 039724          106 DITSVKETKLHETEPKLPTIFSPGRSPMMKVVIEDAKTFPSSSELRDDLQEVLPNPFKAAAASALAFLCGSFVPLLPAIL  185 (251)
Q Consensus       106 ~~~~e~E~~re~~e~~l~~~~~~e~~el~~i~~~~g~~~~~~~~~e~~~~~~~~~P~~sal~s~lsf~iggliPLlpy~~  185 (251)
                                                                        ..  + +.++++.+++- +..++|.+..--
T Consensus       144 --------------------------------------------------~~--~-l~sg~s~~~G~-l~Pllp~~~~~~  169 (229)
T COG1814         144 --------------------------------------------------AA--T-LSSGISFIIGA-LLPLLPFFFLPD  169 (229)
T ss_pred             --------------------------------------------------HH--H-HHHHHHHHHHH-HHHHHHHHHHhh
Confidence                                                              00  0 46666655554 334555544432


Q ss_pred             hhh-hhHHHHHHHHHHHHHHHHHHHHHHHhC-CCChhHHHHHHHHHHHHHHHHHHHHHhhh
Q 039724          186 FAR-YIVRIVVIAIVTSLALVLFGGFGAHLG-GSPIRVSAVRVLVGGWIAMGVTYGLLKPF  244 (251)
Q Consensus       186 ~~~-~~~a~~~s~~~t~~aL~~~G~~ka~~~-~~~~~~~~l~~l~~G~~aa~~~y~iG~l~  244 (251)
                      ... ....+..+++..++ +.+.....+... .....|..+.-+...+++.+++.++|..+
T Consensus       170 ~~~al~~si~~~~l~L~i-lG~~~a~~s~~~~~~~~lr~v~~gl~aa~lt~~vg~l~~~~~  229 (229)
T COG1814         170 VLSALIASIILALLALAI-LGAVLARLSGASIAKSILRMVLLGLLAALLTYLVGRLFGIFL  229 (229)
T ss_pred             hHHHHHHHHHHHHHHHHH-HHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence            221 23445554444444 444444444444 45667878888888889999999888653

>PF08006 DUF1700: Protein of unknown function (DUF1700); InterPro: IPR012963 This family contains many hypothetical bacterial proteins and two putative membrane proteins (Q6GFD0 from SWISSPROT and Q6G806 from SWISSPROT)

Probab=92.94  E-value=0.73  Score=38.98  Aligned_cols=23  Identities=22%  Similarity=0.290  Sum_probs=15.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhh
Q 039724          222 SAVRVLVGGWIAMGVTYGLLKPF  244 (251)
Q Consensus       222 ~~l~~l~~G~~aa~~~y~iG~l~  244 (251)
                      .++-.+.+|++...+++.+.+++
T Consensus       142 ~~i~~~glGlll~~~~~~l~k~~  164 (181)
T PF08006_consen  142 FGIGLFGLGLLLIVITFYLTKLF  164 (181)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH
Confidence            34556677777777777766654

>COG4709 Predicted membrane protein [Function unknown]

Probab=86.03  E-value=10  Score=32.84  Aligned_cols=47  Identities=23%  Similarity=0.229  Sum_probs=19.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHhCCCC---hhHHHHHHHHHHHHHHHHHHHHH
Q 039724          195 VIAIVTSLALVLFGGFGAHLGGSP---IRVSAVRVLVGGWIAMGVTYGLL  241 (251)
Q Consensus       195 ~s~~~t~~aL~~~G~~ka~~~~~~---~~~~~l~~l~~G~~aa~~~y~iG  241 (251)
                      ++++++..++++-|.+.+.+.+--   -.-+.+...++|+...+.+.+.|
T Consensus       115 lt~if~~~a~~~agil~g~~~~~e~~~~i~~~i~a~f~~IGs~lLgl~~~  164 (195)
T COG4709         115 LTLIFSGWALVAAGILGGVILGVESLFLIGSSISAFFIGIGSLLLGLGLG  164 (195)
T ss_pred             HHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            444444455544444444443321   12233334444444444444444

>cd02433 Nodulin-21_like_2 Nodulin-21 and CCC1-related protein family

Probab=82.60  E-value=35  Score=30.38  Aligned_cols=81  Identities=9%  Similarity=-0.067  Sum_probs=43.5

Q ss_pred             CChHHHHHHHHHHHHHhhhhhhhhHHh-hhhhhHHHHHHHHHHHHHHHHH-HHHHHHhCCCChhHHHHHHHHHHHHHHHH
Q 039724          159 PNPFKAAAASALAFLCGSFVPLLPAIL-FARYIVRIVVIAIVTSLALVLF-GGFGAHLGGSPIRVSAVRVLVGGWIAMGV  236 (251)
Q Consensus       159 ~~P~~sal~s~lsf~iggliPLlpy~~-~~~~~~a~~~s~~~t~~aL~~~-G~~ka~~~~~~~~~~~l~~l~~G~~aa~~  236 (251)
                      .+.+ ....+|+.+.+.-++|.+...- ......++.. .+++++.+..+ +.+...---....+..+--++.++++-++
T Consensus       152 ~aAl-~sflsF~ig~liPLLPf~~~~~~~~~~~~s~~~-~~~~L~~lG~~~a~~s~~~~~~~~l~~~~~G~~aa~vsy~i  229 (234)
T cd02433         152 SAAV-SSFLLFALGALIPVLPFLFGMSGLAALVLSVLL-VGLALLATGAVTGLLSGRSPGISALRQLAIGGGAAAVTYLL  229 (234)
T ss_pred             HHHH-HHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHH-HHHHHHHHHHHHHhhCCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence            3445 4566777777888888742100 0111222322 22333333333 44433333456677777777777788888


Q ss_pred             HHHHH
Q 039724          237 TYGLL  241 (251)
Q Consensus       237 ~y~iG  241 (251)
                      ++++|
T Consensus       230 G~l~~  234 (234)
T cd02433         230 GLLFG  234 (234)
T ss_pred             HHHcC
Confidence            87764

Nodulin-21_like_2: This is a family of proteins closely related to nodulin-21, a plant nodule-specific protein that may be involved in symbiotic nitrogen fixation. This family is also related to CCC1, a yeast vacuole transmembrane protein that functions as an iron and manganese transporter.

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00