Citrus Sinensis ID: 039787

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------28
MRVLKMDHMLSCILWLLFTWLFVMALSSFYKRRKAGSEQQPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFGQVTTVVVSSASMAKAILQNHDSSFCNRMVPDAACSYNHQEIGMVWLPVSTPWKNLRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAVFNTSLNVLSNTIFSVDLVDPTAREFKDIVWGIMTELGKPNLSDNFPLLKKLDLQGIRRRMTIHYSKIFEVFDRLIDQRLDQRQEHGYNTSTESSD
cccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHccccEEEEcccccEEEEccHHHHHHHHHHccccccccccHHHHHHHHcccccEEEccccHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccc
cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHcccccHHHHHHHHHHcccEEEEEEccccEEEEccHHHHHHHHHHccHHHcccccHHHHHHHEcccccEEEccccHHHHHHHHHHHHHHHcHHHHHcHHHHHHHHHHHHHHHHHHHHcccccEcHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHccccHHcHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccc
MRVLKMDHMLSCILWLLFTWLFVMALSSFYkrrkagseqqppgptpypvignllelgdkphKSLAKLAKIhgpimtlkfgQVTTVVVSSASMAKAILQNhdssfcnrmvpdaacsynhqeigmvwlpvstpwknLRKICNLhifsshkldanQDIRRKKIKHLLAYVEENCRVGQAIVIGQAVFNTSLNVLSNTIfsvdlvdptareFKDIVWGIMTelgkpnlsdnfpllkkldlQGIRRRMTIHYSKIFEVFDRLIDQRLDqrqehgyntstessd
MRVLKMDHMLSCILWLLFTWLFVMALSSFYKRRKagseqqppgptPYPVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFGQVTTVVVSSASMAKAILQNHDSSFCNRMVPDAACSYNHQEIGMVWLPVSTPWKNLRKICNLHIfsshkldanqDIRRKKIKHLLAYVEENCRVGQAIVIGQAVFNTSLNVLSNTIFsvdlvdptAREFKDIVWGIMTElgkpnlsdnfpLLKKLDLQGIRRRMTIHYSKIFEVFDRLIDQRldqrqehgyntstessd
MRVLKMDHMLSCILWLLFTWLFVMALSSFYKRRKAGSEQQPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFGQvttvvvssASMAKAILQNHDSSFCNRMVPDAACSYNHQEIGMVWLPVSTPWKNLRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAVFNTSLNVLSNTIFSVDLVDPTAREFKDIVWGIMTELGKPNLSDNFPLLKKLDLQGIRRRMTIHYSKIFEVFDRLIDQRLDQRQEHGYNTSTESSD
****KMDHMLSCILWLLFTWLFVMALSSFYK****************PVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFGQVTTVVVSSASMAKAILQNHDSSFCNRMVPDAACSYNHQEIGMVWLPVSTPWKNLRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAVFNTSLNVLSNTIFSVDLVDPTAREFKDIVWGIMTELGKPNLSDNFPLLKKLDLQGIRRRMTIHYSKIFEVFDRLIDQ******************
*R*LKMDHMLSCILWLLFTWLFVMALSS*****************PYPVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFGQVTTVVVSSASMAKAILQNHDSSFCNRMVPDAACSYNHQEIGMVWLPVSTPWKNLRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCR**QAIVIGQAVFNTSLNVLSNTIFSVDLVDPTAREFKDIVWGIMTELGKPNLSDNFPLLKKLDLQGIRRRMTIHYSKIFEVFDRLI********************
MRVLKMDHMLSCILWLLFTWLFVMALSSFYK***********GPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFGQVTTVVVSSASMAKAILQNHDSSFCNRMVPDAACSYNHQEIGMVWLPVSTPWKNLRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAVFNTSLNVLSNTIFSVDLVDPTAREFKDIVWGIMTELGKPNLSDNFPLLKKLDLQGIRRRMTIHYSKIFEVFDRLIDQRLDQRQE***********
**VLKMDHMLSCILWLLFTWLFVMALSSFYKRRKAGSEQQPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFGQVTTVVVSSASMAKAILQNHDSSFCNRMVPDAACSYNHQEIGMVWLPVSTPWKNLRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAVFNTSLNVLSNTIFSVDLVDPTAREFKDIVWGIMTELGKPNLSDNFPLLKKLDLQGIRRRMTIHYSKIFEVFDRLIDQRLDQ**************
iiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MRVLKMDHMLSCILWLLFTWLFVMALSSFYKRRKAGSEQQPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMTLKFGQVTTVVVSSASMAKAILQNHDSSFCNRMVPDAACSYNHQEIGMVWLPVSTPWKNLRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAVFNTSLNVLSNTIFSVDLVDPTAREFKDIVWGIMTELGKPNLSDNFPLLKKLDLQGIRRRMTIHYSKIFEVFDRLIDQRLDQRQEHGYNTSTESSD
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query278 2.2.26 [Sep-21-2011]
Q8VWZ7 493 Geraniol 8-hydroxylase OS N/A no 0.931 0.525 0.524 1e-77
D1MI46 495 Geraniol 8-hydroxylase OS N/A no 0.928 0.521 0.505 3e-71
O23976 490 7-ethoxycoumarin O-deethy N/A no 0.823 0.467 0.497 3e-61
O64635 511 Cytochrome P450 76C4 OS=A yes no 0.982 0.534 0.346 3e-48
O64636 512 Cytochrome P450 76C1 OS=A no no 0.946 0.513 0.328 3e-42
O64638 515 Cytochrome P450 76C3 OS=A no no 0.820 0.442 0.379 5e-42
O64637 512 Cytochrome P450 76C2 OS=A no no 0.805 0.437 0.368 2e-41
O64899 487 (S)-N-methylcoclaurine 3' N/A no 0.910 0.519 0.340 2e-40
O64900 488 (S)-N-methylcoclaurine 3' N/A no 0.910 0.518 0.329 7e-40
Q69X58 500 Ent-cassadiene C11-alpha- no no 0.874 0.486 0.407 1e-38
>sp|Q8VWZ7|C76B6_CATRO Geraniol 8-hydroxylase OS=Catharanthus roseus GN=CYP76B6 PE=1 SV=1 Back     alignment and function desciption
 Score =  289 bits (740), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 140/267 (52%), Positives = 196/267 (73%), Gaps = 8/267 (2%)

Query: 6   MDHMLSCILWLLFTWLFVMALSSFYKRRKAGSEQQPPGPTPYPVIGNLLELGDKPHKSLA 65
           MD+ L+ IL LLF      A S   +R K      PPGP+P P IG+L  LGD+PHKSLA
Sbjct: 1   MDY-LTIILTLLFALTLYEAFSYLSRRTK----NLPPGPSPLPFIGSLHLLGDQPHKSLA 55

Query: 66  KLAKIHGPIMTLKFGQVTTVVVSSASMAKAILQNHDSSFCNRMVPDAACSYNHQEIGMVW 125
           KL+K HGPIM+LK GQ+TT+V+SS++MAK +LQ  D +F +R VP+A  ++N  +  +VW
Sbjct: 56  KLSKKHGPIMSLKLGQITTIVISSSTMAKEVLQKQDLAFSSRSVPNALHAHNQFKFSVVW 115

Query: 126 LPVSTPWKNLRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAVFN 185
           LPV++ W++LRK+ N +IFS ++LDANQ +R +K++ L+AY  +N + G+A+ +G+A F 
Sbjct: 116 LPVASRWRSLRKVLNSNIFSGNRLDANQHLRTRKVQELIAYCRKNSQSGEAVDVGRAAFR 175

Query: 186 TSLNVLSNTIFSVDLVDP---TAREFKDIVWGIMTELGKPNLSDNFPLLKKLDLQGIRRR 242
           TSLN+LSN IFS DL DP   +A+EFKD+VW IM E GKPNL D FPLL+K+D QGIR R
Sbjct: 176 TSLNLLSNLIFSKDLTDPYSDSAKEFKDLVWNIMVEAGKPNLVDFFPLLEKVDPQGIRHR 235

Query: 243 MTIHYSKIFEVFDRLIDQRLDQRQEHG 269
           MTIH+ ++ ++F  L+++RL+QR+  G
Sbjct: 236 MTIHFGEVLKLFGGLVNERLEQRRSKG 262
Hydroxylase involved in the biosynthesis of hydroxygeraniol, a precursor of the terpenoid indole alkaloids such as vinblastine and vincristine. Also able to hydroxylate in vitro nerol and to catalyze 3'-hydroxylation of the flavanone naringenin to form eriodictyol. No activity with apigenin, kaempferol, p-coumaric acid and ferulic acid as substrates.
Catharanthus roseus (taxid: 4058)
EC: 1EC: .EC: 1EC: 4EC: .EC: 1EC: 3EC: .EC: 1EC: 5EC: 2
>sp|D1MI46|C76BA_SWEMU Geraniol 8-hydroxylase OS=Swertia mussotii GN=CYP76B10 PE=1 SV=1 Back     alignment and function description
>sp|O23976|C76B1_HELTU 7-ethoxycoumarin O-deethylase OS=Helianthus tuberosus GN=CYP76B1 PE=1 SV=1 Back     alignment and function description
>sp|O64635|C76C4_ARATH Cytochrome P450 76C4 OS=Arabidopsis thaliana GN=CYP76C4 PE=3 SV=1 Back     alignment and function description
>sp|O64636|C76C1_ARATH Cytochrome P450 76C1 OS=Arabidopsis thaliana GN=CYP76C1 PE=2 SV=1 Back     alignment and function description
>sp|O64638|C76C3_ARATH Cytochrome P450 76C3 OS=Arabidopsis thaliana GN=CYP76C3 PE=2 SV=2 Back     alignment and function description
>sp|O64637|C76C2_ARATH Cytochrome P450 76C2 OS=Arabidopsis thaliana GN=CYP76C2 PE=2 SV=1 Back     alignment and function description
>sp|O64899|C80B1_ESCCA (S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (Fragment) OS=Eschscholzia californica GN=CYP80B1 PE=2 SV=1 Back     alignment and function description
>sp|O64900|C80B2_ESCCA (S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 OS=Eschscholzia californica GN=CYP80B2 PE=2 SV=1 Back     alignment and function description
>sp|Q69X58|C76M7_ORYSJ Ent-cassadiene C11-alpha-hydroxylase 1 OS=Oryza sativa subsp. japonica GN=CYP76M7 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query278
224071632 496 cytochrome P450 [Populus trichocarpa] gi 0.953 0.534 0.567 5e-86
225426693 499 PREDICTED: cytochrome P450 76C4 [Vitis v 0.974 0.543 0.529 4e-83
7406712 499 putative ripening-related P-450 enzyme [ 0.974 0.543 0.529 2e-82
225427085 498 PREDICTED: cytochrome P450 76C4 [Vitis v 0.967 0.540 0.534 3e-82
297742026 594 unnamed protein product [Vitis vinifera] 0.967 0.452 0.534 3e-82
359474277 499 PREDICTED: LOW QUALITY PROTEIN: 7-ethoxy 0.974 0.543 0.525 3e-82
224058639 493 cytochrome P450 [Populus trichocarpa] gi 0.902 0.509 0.539 2e-81
255537171377 cytochrome P450, putative [Ricinus commu 0.967 0.713 0.529 3e-80
359474275 499 PREDICTED: 7-ethoxycoumarin O-deethylase 0.974 0.543 0.525 3e-80
255537173 501 cytochrome P450, putative [Ricinus commu 0.982 0.544 0.543 3e-79
>gi|224071632|ref|XP_002303546.1| cytochrome P450 [Populus trichocarpa] gi|222840978|gb|EEE78525.1| cytochrome P450 [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  323 bits (828), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 152/268 (56%), Positives = 200/268 (74%), Gaps = 3/268 (1%)

Query: 6   MDHMLSCILWLLFTWLFVMALSSFYKRRKAGSEQQPPGPTPYPVIGNLLELGDKPHKSLA 65
           M+  +S +L+ L T+  + +L    +R K  S + PPGP+  P++GNLL+LGDKPHKSLA
Sbjct: 1   MNFFISVLLYFLLTFAVIQSLDYILRRSKRKSGKLPPGPSRLPIVGNLLDLGDKPHKSLA 60

Query: 66  KLAKIHGPIMTLKFGQVTTVVVSSASMAKAILQNHDSSFCNRMVPDAACSYNHQEIGMVW 125
           KLAK HG +M+LK GQVTT+VVSSA+MAK +LQ HD +FCNR V DA  + +H E G+ W
Sbjct: 61  KLAKTHGQLMSLKLGQVTTIVVSSATMAKEVLQKHDLTFCNRTVVDAVRALDHHEAGIAW 120

Query: 126 LPVSTPWKNLRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAVFN 185
           LPV+T W+NLRKICN HIF++ KLDANQD+RRKK++ LLA V+E C VG+A+ + QA F 
Sbjct: 121 LPVATRWRNLRKICNSHIFTAQKLDANQDLRRKKVQDLLAEVQERCLVGEAVDLRQAAFT 180

Query: 186 TSLNVLSNTIFSVDLVDPT---AREFKDIVWGIMTELGKPNLSDNFPLLKKLDLQGIRRR 242
            +LN LSNT+ S+DL D +   AREFK+ +  IM E GKPNL D FPLL+++D QGIRRR
Sbjct: 181 ATLNALSNTVLSLDLTDLSSDIAREFKEHISCIMDEAGKPNLVDYFPLLRRIDPQGIRRR 240

Query: 243 MTIHYSKIFEVFDRLIDQRLDQRQEHGY 270
             IH+ K+F++FDRLI +RL  R+  GY
Sbjct: 241 TAIHFGKVFDLFDRLIIERLQLRKVKGY 268

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225426693|ref|XP_002281735.1| PREDICTED: cytochrome P450 76C4 [Vitis vinifera] Back     alignment and taxonomy information
>gi|7406712|emb|CAB85635.1| putative ripening-related P-450 enzyme [Vitis vinifera] Back     alignment and taxonomy information
>gi|225427085|ref|XP_002276561.1| PREDICTED: cytochrome P450 76C4 [Vitis vinifera] Back     alignment and taxonomy information
>gi|297742026|emb|CBI33813.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|359474277|ref|XP_003631428.1| PREDICTED: LOW QUALITY PROTEIN: 7-ethoxycoumarin O-deethylase-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|224058639|ref|XP_002299579.1| cytochrome P450 [Populus trichocarpa] gi|222846837|gb|EEE84384.1| cytochrome P450 [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255537171|ref|XP_002509652.1| cytochrome P450, putative [Ricinus communis] gi|223549551|gb|EEF51039.1| cytochrome P450, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|359474275|ref|XP_003631427.1| PREDICTED: 7-ethoxycoumarin O-deethylase-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|255537173|ref|XP_002509653.1| cytochrome P450, putative [Ricinus communis] gi|223549552|gb|EEF51040.1| cytochrome P450, putative [Ricinus communis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query278
UNIPROTKB|D1MI46 495 CYP76B10 "Geraniol 8-hydroxyla 0.942 0.529 0.5 1.5e-67
UNIPROTKB|Q8VWZ7 493 CYP76B6 "Geraniol 8-hydroxylas 0.931 0.525 0.505 1.9e-67
TAIR|locus:2043694 511 CYP76C4 ""cytochrome P450, fam 0.982 0.534 0.339 6.6e-42
UNIPROTKB|Q69X58 500 CYP76M7 "Ent-cassadiene C11-al 0.881 0.49 0.387 4.6e-41
TAIR|locus:2043614 515 CYP76C3 ""cytochrome P450, fam 0.917 0.495 0.361 4.6e-41
UNIPROTKB|Q6YTF1 500 CYP76M8 "Ent-cassadiene C11-al 0.881 0.49 0.387 2e-40
TAIR|locus:2043605 512 CYP76C2 ""cytochrome P450, fam 0.960 0.521 0.335 6.8e-40
TAIR|locus:2100982 498 CYP76C7 ""cytochrome P450, fam 0.906 0.506 0.354 6.8e-40
TAIR|locus:2043699 512 CYP76C1 ""cytochrome P450, fam 0.982 0.533 0.306 2.1e-36
TAIR|locus:2012693 511 CYP76C6 ""cytochrome P450, fam 0.974 0.530 0.297 9.2e-36
UNIPROTKB|D1MI46 CYP76B10 "Geraniol 8-hydroxylase" [Swertia mussotii (taxid:137888)] Back     alignment and assigned GO terms
 Score = 686 (246.5 bits), Expect = 1.5e-67, P = 1.5e-67
 Identities = 135/270 (50%), Positives = 187/270 (69%)

Query:     6 MDH-MLSCILWLLFTWLFVMALSSFYKRRKAGSEQQPPGPTPYPVIGNLLELGDKPHKSL 64
             MD   L+  +  LFT     AL+ F+ R+   S+  PPGP+P P+IGNL  LGD+PHKSL
Sbjct:     1 MDFDFLTIAIGFLFTITLYQALN-FFSRK---SKNLPPGPSPLPLIGNLHLLGDQPHKSL 56

Query:    65 AKLAKIHGPIMTLKFGQXXXXXXXXASMAKAILQNHDSSFCNRMVPDAACSYNHQEIGMV 124
             AKLAK HGPIM L+ GQ        + MAK +LQ  D +F +R +P+A  +++  +  ++
Sbjct:    57 AKLAKKHGPIMGLQLGQVTTIVVTSSGMAKEVLQKQDLAFSSRSIPNAIHAHDQYKYSVI 116

Query:   125 WLPVSTPWKNLRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAVF 184
             WLPV++ W+ LRK  N ++FS ++LDANQ +R +K++ L+AY  ++ + G AI +G+A F
Sbjct:   117 WLPVASRWRGLRKALNSNMFSGNRLDANQHLRSRKVQELIAYCRKSSQTGDAIDVGRAAF 176

Query:   185 NTSLNVLSNTIFSVDLVDP---TAREFKDIVWGIMTELGKPNLSDNFPLLKKLDLQGIRR 241
              TSLN+LSNT+FS DL DP   +A+EFKD+VW +M E GKPNL D FPLL K+D QGIR+
Sbjct:   177 RTSLNLLSNTMFSKDLTDPYSDSAKEFKDLVWNVMVEAGKPNLVDYFPLLDKVDPQGIRK 236

Query:   242 RMTIHYSKIFEVFDRLIDQRLDQRQEHGYN 271
             RMTIH+ KI E+F  LID+RL Q++  G N
Sbjct:   237 RMTIHFGKILELFGGLIDERLQQKKAKGVN 266
GO:0016099 "monoterpenoid biosynthetic process" evidence=IDA
GO:0016709 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen" evidence=IDA
UNIPROTKB|Q8VWZ7 CYP76B6 "Geraniol 8-hydroxylase" [Catharanthus roseus (taxid:4058)] Back     alignment and assigned GO terms
TAIR|locus:2043694 CYP76C4 ""cytochrome P450, family 76, subfamily C, polypeptide 4"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q69X58 CYP76M7 "Ent-cassadiene C11-alpha-hydroxylase 1" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
TAIR|locus:2043614 CYP76C3 ""cytochrome P450, family 76, subfamily C, polypeptide 3"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q6YTF1 CYP76M8 "Ent-cassadiene C11-alpha-hydroxylase 2" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
TAIR|locus:2043605 CYP76C2 ""cytochrome P450, family 76, subfamily C, polypeptide 2"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2100982 CYP76C7 ""cytochrome P450, family 76, subfamily C, polypeptide 7"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2043699 CYP76C1 ""cytochrome P450, family 76, subfamily C, polypeptide 1"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2012693 CYP76C6 ""cytochrome P450, family 76, subfamily C, polypeptide 6"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query278
PLN02687 517 PLN02687, PLN02687, flavonoid 3'-monooxygenase 2e-48
PLN00110 504 PLN00110, PLN00110, flavonoid 3',5'-hydroxylase (F 6e-38
PLN03112 514 PLN03112, PLN03112, cytochrome P450 family protein 3e-32
pfam00067 461 pfam00067, p450, Cytochrome P450 2e-29
PLN02183 516 PLN02183, PLN02183, ferulate 5-hydroxylase 2e-28
PLN03234 499 PLN03234, PLN03234, cytochrome P450 83B1; Provisio 1e-20
PLN02966 502 PLN02966, PLN02966, cytochrome P450 83A1 2e-20
PTZ00404 482 PTZ00404, PTZ00404, cytochrome P450; Provisional 1e-14
PLN02394 503 PLN02394, PLN02394, trans-cinnamate 4-monooxygenas 9e-13
PLN02655 466 PLN02655, PLN02655, ent-kaurene oxidase 1e-12
PLN00168 519 PLN00168, PLN00168, Cytochrome P450; Provisional 4e-06
PLN02971 543 PLN02971, PLN02971, tryptophan N-hydroxylase 9e-06
PLN03018 534 PLN03018, PLN03018, homomethionine N-hydroxylase 7e-05
>gnl|CDD|215371 PLN02687, PLN02687, flavonoid 3'-monooxygenase Back     alignment and domain information 
 Score =  167 bits (424), Expect = 2e-48
 Identities = 96/282 (34%), Positives = 147/282 (52%), Gaps = 19/282 (6%)

Query: 6   MDHMLSCILWLLFTWLFVMALSSFYKRRKAGSEQQPPGPTPYPVIGNLLELGDKPHKSLA 65
           MD  L  +L  +   + V  L              PPGP  +PV+GNL +LG KPH ++A
Sbjct: 1   MDLPLPLLLGTVAVSVLVWCLLLRRGGSGKHKRPLPPGPRGWPVLGNLPQLGPKPHHTMA 60

Query: 66  KLAKIHGPIMTLKFGQVTTVVVSSASMAKAILQNHDSSFCNRMVPDAA--CSYNHQEIGM 123
            LAK +GP+  L+FG V  VV +SAS+A   L+ HD++F NR     A   +YN+Q+  +
Sbjct: 61  ALAKTYGPLFRLRFGFVDVVVAASASVAAQFLRTHDANFSNRPPNSGAEHMAYNYQD--L 118

Query: 124 VWLPVSTPWKNLRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVGQ--AIVIGQ 181
           V+ P    W+ LRKIC +H+FS+  LD  + +R +++  L   V E  R      + +GQ
Sbjct: 119 VFAPYGPRWRALRKICAVHLFSAKALDDFRHVREEEVALL---VRELARQHGTAPVNLGQ 175

Query: 182 AVFNTSLNVLSNT-----IFSVDLVDPTAREFKDIVWGIMTELGKPNLSDNFPLLKKLDL 236
            V   + N L        +F+ D  D  AREFK++V  +M   G  N+ D  P L+ LDL
Sbjct: 176 LVNVCTTNALGRAMVGRRVFAGD-GDEKAREFKEMVVELMQLAGVFNVGDFVPALRWLDL 234

Query: 237 QGIRRRMTIHYSKIFEVFDRLIDQRLDQRQEHGYNTSTESSD 278
           QG+  +M     ++   FD +++  +++ +  G   S E  D
Sbjct: 235 QGVVGKM----KRLHRRFDAMMNGIIEEHKAAGQTGSEEHKD 272

Length = 517
>gnl|CDD|177725 PLN00110, PLN00110, flavonoid 3',5'-hydroxylase (F3'5'H); Provisional Back     alignment and domain information
>gnl|CDD|215583 PLN03112, PLN03112, cytochrome P450 family protein; Provisional Back     alignment and domain information
>gnl|CDD|215689 pfam00067, p450, Cytochrome P450 Back     alignment and domain information
>gnl|CDD|165828 PLN02183, PLN02183, ferulate 5-hydroxylase Back     alignment and domain information
>gnl|CDD|178773 PLN03234, PLN03234, cytochrome P450 83B1; Provisional Back     alignment and domain information
>gnl|CDD|178550 PLN02966, PLN02966, cytochrome P450 83A1 Back     alignment and domain information
>gnl|CDD|173595 PTZ00404, PTZ00404, cytochrome P450; Provisional Back     alignment and domain information
>gnl|CDD|215221 PLN02394, PLN02394, trans-cinnamate 4-monooxygenase Back     alignment and domain information
>gnl|CDD|215354 PLN02655, PLN02655, ent-kaurene oxidase Back     alignment and domain information
>gnl|CDD|215086 PLN00168, PLN00168, Cytochrome P450; Provisional Back     alignment and domain information
>gnl|CDD|166612 PLN02971, PLN02971, tryptophan N-hydroxylase Back     alignment and domain information
>gnl|CDD|178592 PLN03018, PLN03018, homomethionine N-hydroxylase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 278
KOG0156 489 consensus Cytochrome P450 CYP2 subfamily [Secondar 100.0
PLN02687 517 flavonoid 3'-monooxygenase 100.0
PLN00110 504 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional 100.0
PLN03234 499 cytochrome P450 83B1; Provisional 100.0
PLN03112 514 cytochrome P450 family protein; Provisional 100.0
PLN02971 543 tryptophan N-hydroxylase 100.0
PTZ00404 482 cytochrome P450; Provisional 100.0
PLN02183 516 ferulate 5-hydroxylase 100.0
PLN02966 502 cytochrome P450 83A1 99.98
PLN00168 519 Cytochrome P450; Provisional 99.98
PLN02290 516 cytokinin trans-hydroxylase 99.97
PLN02655 466 ent-kaurene oxidase 99.97
PLN02500 490 cytochrome P450 90B1 99.97
PLN02394 503 trans-cinnamate 4-monooxygenase 99.97
KOG0158 499 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subf 99.96
KOG0157 497 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfami 99.96
PLN02196 463 abscisic acid 8'-hydroxylase 99.96
PF00067 463 p450: Cytochrome P450 p450 superfamily signature b 99.96
PLN03018 534 homomethionine N-hydroxylase 99.96
PLN02302 490 ent-kaurenoic acid oxidase 99.95
PLN02774 463 brassinosteroid-6-oxidase 99.95
PLN03195 516 fatty acid omega-hydroxylase; Provisional 99.94
PLN02169 500 fatty acid (omega-1)-hydroxylase/midchain alkane h 99.94
PLN02987 472 Cytochrome P450, family 90, subfamily A 99.94
PLN03141 452 3-epi-6-deoxocathasterone 23-monooxygenase; Provis 99.94
PLN02936 489 epsilon-ring hydroxylase 99.93
KOG0159 519 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 99.93
PLN02738 633 carotene beta-ring hydroxylase 99.93
PLN02426 502 cytochrome P450, family 94, subfamily C protein 99.88
PLN02648 480 allene oxide synthase 99.87
KOG0684 486 consensus Cytochrome P450 [Secondary metabolites b 99.8
COG2124 411 CypX Cytochrome P450 [Secondary metabolites biosyn 99.5
PF0664382 DUF1158: Protein of unknown function (DUF1158); In 82.61
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information 
Probab=100.00  E-value=2.3e-36  Score=246.60  Aligned_cols=227  Identities=30%  Similarity=0.519  Sum_probs=197.3

Q ss_pred             CCCCCCCCCCCeeeccccCCCC-chHHHHHHHHHhCCceEEeccCeeEEEecCHHHHHHHHHhcCCCCCCCCc-hhhhhh
Q 039787           38 EQQPPGPTPYPVIGNLLELGDK-PHKSLAKLAKIHGPIMTLKFGQVTTVVVSSASMAKAILQNHDSSFCNRMV-PDAACS  115 (278)
Q Consensus        38 ~~~~pgp~~~p~~g~~~~~~~~-~~~~~~~~~~~yG~i~~~~~~~~~~v~i~dp~~~~~i~~~~~~~~~~~~~-~~~~~~  115 (278)
                      .+.||||+++|++||++++... +|..+.+|.++|||++.+++|..++|+++|+++++|++.+++..|++|+. ......
T Consensus        25 ~~lPPGP~~lPiIGnl~~l~~~~~h~~~~~ls~~yGpi~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~~~~~~~  104 (489)
T KOG0156|consen   25 RNLPPGPPPLPIIGNLHQLGSLPPHRSFRKLSKKYGPVFTLRLGSVPVVVISSYEAAKEVLVKQDLEFADRPDPTATLKY  104 (489)
T ss_pred             CCCCcCCCCCCccccHHHcCCCchhHHHHHHHHHhCCeEEEEecCceEEEECCHHHHHHHHHhCCccccCCCCchhhHHH
Confidence            7899999999999999999766 99999999999999999999999999999999999999999999999997 224455


Q ss_pred             cccCcccccccCCCchHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHHhccCCCccchHHHHHHHHHHHHHHHH
Q 039787          116 YNHQEIGMVWLPVSTPWKNLRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAVFNTSLNVLSNTI  195 (278)
Q Consensus       116 ~~~~g~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~~~~~~~~vi~~~~  195 (278)
                      +..++.|++++++|+.||.+||+.....|+...++.....-.++++.+++.+.+ ...+.+||+.+.+..++.+||++++
T Consensus       105 ~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R~~E~~~l~~~l~~-~~~~~~vdl~~~l~~~~~nvI~~~~  183 (489)
T KOG0156|consen  105 LSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIREEEVDELVKKLSK-SKKGEPVDLSELLDLLVGNVICRML  183 (489)
T ss_pred             hcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHHHHHHHHHHHHHHh-cCCCceeeHHHHHHHHHHHHHHHHH
Confidence            555679999998899999999999988899999999888889999999999976 3233789999999999999999999


Q ss_pred             hcccccC---ccHHHHHHHHHHHHHHhCCCccccccc-cccccc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 039787          196 FSVDLVD---PTAREFKDIVWGIMTELGKPNLSDNFP-LLKKLD-LQGIRRRMTIHYSKIFEVFDRLIDQRLDQR  265 (278)
Q Consensus       196 fG~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~p-~l~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  265 (278)
                      ||.++..   +...++.+.+.+.....+.....+++| ++.+++ ..+..++......++..+++++|++|++..
T Consensus       184 fG~rf~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~i~eh~~~~  258 (489)
T KOG0156|consen  184 FGRRFEEEDEEEFLELKELVEESLELLGSFNLSDYFPFLLRWLDGISGLEKRLKKVSKRLDEFLERIIDEHREKI  258 (489)
T ss_pred             hCCccccCCchHHHHHHHHHHHHHHHhCCccHHHHhhHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            9999943   344558889999999988888889999 677764 234566777777779999999999998865

>PLN02687 flavonoid 3'-monooxygenase Back     alignment and domain information
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional Back     alignment and domain information
>PLN03234 cytochrome P450 83B1; Provisional Back     alignment and domain information
>PLN03112 cytochrome P450 family protein; Provisional Back     alignment and domain information
>PLN02971 tryptophan N-hydroxylase Back     alignment and domain information
>PTZ00404 cytochrome P450; Provisional Back     alignment and domain information
>PLN02183 ferulate 5-hydroxylase Back     alignment and domain information
>PLN02966 cytochrome P450 83A1 Back     alignment and domain information
>PLN00168 Cytochrome P450; Provisional Back     alignment and domain information
>PLN02290 cytokinin trans-hydroxylase Back     alignment and domain information
>PLN02655 ent-kaurene oxidase Back     alignment and domain information
>PLN02500 cytochrome P450 90B1 Back     alignment and domain information
>PLN02394 trans-cinnamate 4-monooxygenase Back     alignment and domain information
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism] Back     alignment and domain information
>PLN02196 abscisic acid 8'-hydroxylase Back     alignment and domain information
>PF00067 p450: Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature; InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry Back     alignment and domain information
>PLN03018 homomethionine N-hydroxylase Back     alignment and domain information
>PLN02302 ent-kaurenoic acid oxidase Back     alignment and domain information
>PLN02774 brassinosteroid-6-oxidase Back     alignment and domain information
>PLN03195 fatty acid omega-hydroxylase; Provisional Back     alignment and domain information
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase Back     alignment and domain information
>PLN02987 Cytochrome P450, family 90, subfamily A Back     alignment and domain information
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional Back     alignment and domain information
>PLN02936 epsilon-ring hydroxylase Back     alignment and domain information
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PLN02738 carotene beta-ring hydroxylase Back     alignment and domain information
>PLN02426 cytochrome P450, family 94, subfamily C protein Back     alignment and domain information
>PLN02648 allene oxide synthase Back     alignment and domain information
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PF06643 DUF1158: Protein of unknown function (DUF1158); InterPro: IPR010590 This family consists of several enterobacterial YbdJ proteins Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query278
1og2_A 475 Structure Of Human Cytochrome P450 Cyp2c9 Length = 8e-10
1r9o_A 477 Crystal Structure Of P4502c9 With Flurbiprofen Boun 1e-09
4gqs_A 477 Structure Of Human Microsomal Cytochrome P450 (cyp) 1e-08
3e4e_A 476 Human Cytochrome P450 2e1 In Complex With The Inhib 2e-07
1dt6_A 473 Structure Of Mammalian Cytochrome P450 2c5 Length = 1e-06
1pq2_A 476 Crystal Structure Of Human Drug Metabolizing Cytoch 2e-06
3pm0_A 507 Structural Characterization Of The Complex Between 1e-05
2pg5_A 476 Crystal Structure Of Human Microsomal P450 2a6 N297 3e-05
2pg7_A 476 Crystal Structure Of Human Microsomal P450 2a6 N297 4e-05
2pg6_A 476 Crystal Structure Of Human Microsomal P450 2a6 L240 4e-05
1z10_A 476 Crystal Structure Of Human Microsomal P450 2a6 With 4e-05
3ebs_A 476 Human Cytochrome P450 2a6 I208sI300FG301AS369G IN C 4e-05
2p85_A 476 Structure Of Human Lung Cytochrome P450 2a13 With I 4e-05
4i8v_A 491 Human Cytochrome P450 1a1 In Complex With Alpha-nap 5e-05
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9 Length = 475 Back     alignment and structure 
Iteration: 1

 Score = 60.8 bits (146), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 55/107 (51%), Gaps = 3/107 (2%)
Query: 33  RKAGSEQQPPGPTPYPVIGNLLELGDKP-HKSLAKLAKIHGPIMTLKFGQXXXXXXXXAS 91
           +K  S+ +PPGPTP PVIGN+L++G K   KSL  L+K++GP+ TL FG           
Sbjct: 3   KKTSSKGRPPGPTPLPVIGNILQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYE 62
Query: 92  MAKAILQNHDSSFCNRMVPDAACSYNHQEIGMVWLPVSTPWKNLRKI 138
             K  L +    F  R +   A   N +  G+V+      WK +R+ 
Sbjct: 63  AVKEALIDLGEEFSGRGIFPLAERAN-RGFGIVF-SNGKKWKEIRRF 107
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound Length = 477 Back     alignment and structure
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19 Length = 477 Back     alignment and structure
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4- Methylpyrazole Length = 476 Back     alignment and structure
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5 Length = 473 Back     alignment and structure
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome P450 2c8 Length = 476 Back     alignment and structure
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha- Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1) Length = 507 Back     alignment and structure
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q Length = 476 Back     alignment and structure
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V Length = 476 Back     alignment and structure
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q Length = 476 Back     alignment and structure
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With Coumarin Bound Length = 476 Back     alignment and structure
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX With Phenacetin Length = 476 Back     alignment and structure
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole Bound In Two Alternate Conformations Length = 476 Back     alignment and structure
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With Alpha-naphthoflavone Length = 491 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query278
3n9y_A 487 Cholesterol SIDE-chain cleavage enzyme; cytochrome 1e-47
3k9v_A 482 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitocho 3e-47
3b98_A 475 Prostaglandin I2 synthase; prostacyclin synthase, 6e-43
3dax_A 491 Cytochrome P450 7A1; cholesterol, cholesterol 7-al 2e-40
3pm0_A 507 Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase 8e-30
2hi4_A 495 Cytochrome P450 1A2; CYP1A2, monooxygenase, drug m 1e-29
3b6h_A 498 Prostacyclin synthase; enzyme-inhibitor complex, C 5e-29
3swz_A 494 Steroid 17-alpha-hydroxylase/17,20 lyase; cytochro 1e-27
3qz1_A 496 Steroid 21-hydroxylase; P450 monooxygenase, oxidor 1e-26
3czh_A 481 Cytochrome P450 2R1; vitamin D, vitamin S 25-hydro 3e-24
3s79_A 503 Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD 2e-22
3tbg_A 479 Cytochrome P450 2D6; monooxygenase, thioridazine, 4e-22
3e6i_A 476 CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, mono 4e-20
1po5_A 476 Cytochrome P450 2B4; oxidoreductase, membrane prot 1e-17
1r9o_A 477 Cytochrome P450 2C9; monooxygenase, drug metaboliz 1e-17
2fdv_A 476 Cytochrome P450 2A6; CYP2A6, monooxygenase, drug m 4e-17
2cib_A 455 Cytochrome P450 51; heme, heme lipid synthesis, me 1e-16
3dbg_A 467 Putative cytochrome P450; cytochrome P450 oxidored 6e-16
1izo_A 417 P450bsbeta, cytochrome P450 152A1; heme protein, p 4e-15
3i3k_A 461 Lanosterol 14-alpha demethylase; cytochrome P450, 4e-14
2ij2_A 470 Cytochrome P450 BM3; monoxygenase, heme binding pr 2e-13
2ve3_A 444 Putative cytochrome P450 120; oxidoreductase, mono 1e-12
3awm_A 415 Fatty acid alpha-hydroxylase; cytochrome P450, per 2e-12
3gw9_A 450 Sterol 14alpha-demethylase; CYP51, cytochrome P450 6e-10
3dsk_A 495 Cytochrome P450 74A, chloroplast; P450 fold, fatty 4e-09
3mdm_A 456 Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, th 2e-08
3nxu_A 485 Cytochrome P450 3A4; alpha beta protein, cytochrom 4e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-07
1n97_A 389 CYP175A1; electron transport; HET: SRT HEM; 1.80A 6e-06
3dan_A 473 Cytochrome P450 74A2; AOS heme cytochrome P450 str 2e-04
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A* Length = 487 Back     alignment and structure
 Score =  164 bits (417), Expect = 1e-47
 Identities = 39/252 (15%), Positives = 79/252 (31%), Gaps = 17/252 (6%)

Query: 33  RKAGSEQQPPGPTPYPVIGNLLELG----DKPHKSLAKLAKIHGPIMTLKFGQVTTVVVS 88
           R      + P P     +            K H    +  + +GPI   K G V +V V 
Sbjct: 3   RSPRPFNEIPSPGDNGWLNLYHFWRETGTHKVHLHHVQNFQKYGPIYREKLGNVESVYVI 62

Query: 89  SASMAKAILQNHDSSFCNRMVPDAACSYN-HQEIGMVWLPVSTPWKNLRKICNLHIFSSH 147
                  + ++   +    ++P     +  +Q    V L  S  WK  R   N  + +  
Sbjct: 63  DPEDVALLFKSEGPNPERFLIPPWVAYHQYYQRPIGVLLKKSAAWKKDRVALNQEVMAPE 122

Query: 148 KLDANQDIRRKKIKHLLAYVEENCR----VGQAIVIGQAVFNTSLNVLSNTIFSVDL--- 200
                  +     +  ++ +    +       +  I   +F  +   ++N IF       
Sbjct: 123 ATKNFLPLLDAVSRDFVSVLHRRIKKAGSGNYSGDISDDLFRFAFESITNVIFGERQGML 182

Query: 201 ---VDPTAREFKDIVWGIMTELGKPNLSDNFPLLKKLDLQGIRRRMTIHYSKIFEVFDRL 257
              V+P A+ F D ++ +        + +  P L +L      +     +  IF   D  
Sbjct: 183 EEVVNPEAQRFIDAIYQMFHTSVP--MLNLPPDLFRLFRTKTWKDHVAAWDVIFSKADIY 240

Query: 258 IDQRLDQRQEHG 269
                 + ++ G
Sbjct: 241 TQNFYWELRQKG 252
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A* Length = 482 Back     alignment and structure
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A* Length = 475 Back     alignment and structure
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A* Length = 491 Back     alignment and structure
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens} Length = 507 Back     alignment and structure
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens} Length = 495 Back     alignment and structure
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A* Length = 498 Back     alignment and structure
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A* Length = 494 Back     alignment and structure
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus} Length = 496 Back     alignment and structure
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A* Length = 481 Back     alignment and structure
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* Length = 503 Back     alignment and structure
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A* Length = 479 Back     alignment and structure
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A* Length = 476 Back     alignment and structure
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A* Length = 476 Back     alignment and structure
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A* Length = 477 Back     alignment and structure
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A* Length = 476 Back     alignment and structure
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A* Length = 455 Back     alignment and structure
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A* Length = 467 Back     alignment and structure
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A* Length = 417 Back     alignment and structure
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ... Length = 470 Back     alignment and structure
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A* Length = 444 Back     alignment and structure
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A* Length = 415 Back     alignment and structure
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A* Length = 450 Back     alignment and structure
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A* Length = 495 Back     alignment and structure
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* Length = 456 Back     alignment and structure
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A* Length = 485 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A* Length = 389 Back     alignment and structure
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A* Length = 473 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query278
3swz_A 494 Steroid 17-alpha-hydroxylase/17,20 lyase; cytochro 100.0
3pm0_A 507 Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase 100.0
2hi4_A 495 Cytochrome P450 1A2; CYP1A2, monooxygenase, drug m 99.97
3qz1_A 496 Steroid 21-hydroxylase; P450 monooxygenase, oxidor 99.97
3s79_A 503 Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD 99.97
3k9v_A 482 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitocho 99.97
3e6i_A 476 CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, mono 99.97
3czh_A 481 Cytochrome P450 2R1; vitamin D, vitamin S 25-hydro 99.97
3gw9_A 450 Sterol 14alpha-demethylase; CYP51, cytochrome P450 99.97
1r9o_A 477 Cytochrome P450 2C9; monooxygenase, drug metaboliz 99.96
2fdv_A 476 Cytochrome P450 2A6; CYP2A6, monooxygenase, drug m 99.96
3nxu_A 485 Cytochrome P450 3A4; alpha beta protein, cytochrom 99.96
1po5_A 476 Cytochrome P450 2B4; oxidoreductase, membrane prot 99.96
3tbg_A 479 Cytochrome P450 2D6; monooxygenase, thioridazine, 99.96
3ld6_A 461 Lanosterol 14-alpha demethylase; cytochrome P450, 99.96
2ij2_A 470 Cytochrome P450 BM3; monoxygenase, heme binding pr 99.95
3n9y_A 487 Cholesterol SIDE-chain cleavage enzyme; cytochrome 99.95
3i3k_A 461 Lanosterol 14-alpha demethylase; cytochrome P450, 99.94
2ve3_A 444 Putative cytochrome P450 120; oxidoreductase, mono 99.94
2cib_A 455 Cytochrome P450 51; heme, heme lipid synthesis, me 99.94
3dbg_A 467 Putative cytochrome P450; cytochrome P450 oxidored 99.94
3mdm_A 456 Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, th 99.92
3v8d_A 491 Cholesterol 7-alpha-monooxygenase; cytochrome, oxi 99.91
2cd8_A 436 Cytochrome P450 monooxygenase; oxidoreductase, PIK 99.91
1izo_A 417 P450bsbeta, cytochrome P450 152A1; heme protein, p 99.9
1n97_A 389 CYP175A1; electron transport; HET: SRT HEM; 1.80A 99.9
3awm_A 415 Fatty acid alpha-hydroxylase; cytochrome P450, per 99.9
1jfb_A 404 Nitric-oxide reductase cytochrome P450 55A1; cytoc 99.89
1ued_A 406 P450 OXYC, P450 monooxygenase; cytochrome P450 van 99.87
2zbx_A 412 Cytochrome P450-SU1; beta prism, heme, iron, metal 99.86
1cpt_A 428 Cytochrome P450-TERP; oxidoreductase(oxygenase); H 99.86
3dax_A 491 Cytochrome P450 7A1; cholesterol, cholesterol 7-al 99.85
3dsk_A 495 Cytochrome P450 74A, chloroplast; P450 fold, fatty 99.83
3oo3_A 384 OXY protein; cytochrome P450, monooxygenase, PCD-t 99.83
3b6h_A 498 Prostacyclin synthase; enzyme-inhibitor complex, C 99.83
2jjn_A 411 Cytochrome P450 113A1; oxidoreductase, iron, heme, 99.83
2zwu_A 415 Camphor 5-monooxygenase; P450CAM, camphor-hydroxyl 99.82
3ivy_A 433 Cytochrome P450 CYP125; cholesterol, monooxygenase 99.82
1s1f_A 406 Putative cytochrome P450; cytochrome P450 oxidored 99.82
3abb_A 408 CYP105D6, cytochrome P450 hydroxylase; oxidoreduct 99.82
3aba_A 403 Cytochrome P450; oxidoreductase, heme, monooxygena 99.82
2wm5_A 435 CYP124, putative cytochrome P450 124; metal-bindin 99.81
3dan_A 473 Cytochrome P450 74A2; AOS heme cytochrome P450 str 99.81
3tyw_A 417 Putative cytochrome P450; P450 monooxygenase, oxid 99.81
3ejb_B 404 Biotin biosynthesis cytochrome P450-like enzyme; p 99.81
3tkt_A 450 Cytochrome P450; aromatic hydrocarbon binding of P 99.8
1odo_A 408 Putative cytochrome P450 154A1; P450 monooxygenase 99.8
1z8o_A 404 6-deoxyerythronolide B hydroxylase; heme, CYP, ery 99.8
2y5n_A 417 MYCG, P-450-like protein; oxidoreductase, mycinami 99.8
2xbk_A 404 PIMD protein; epoxidation, oxidoreductase; HET: HE 99.8
3a4g_A 411 Vitamin D hydroxylase; cytochrome P450, hemoprotei 99.79
2xkr_A 398 CYP142, putative cytochrome P450 142; oxidoreducta 99.79
4fb2_A 398 P450CIN; heme, monooxygenase, cindoxin, oxidoreduc 99.79
3b98_A 475 Prostaglandin I2 synthase; prostacyclin synthase, 99.78
1q5d_A 419 P450 epoxidase; cytochrome P450, epothilone, oxydo 99.78
2z36_A 413 MOXA, cytochrome P450 type compactin 3'',4''- hydr 99.77
2z3t_A 425 Cytochrome P450; monoxygenase, oxydoreductase, hem 99.77
3r9b_A 418 Cytochrome P450 164A2; monooxygenase, oxidoreducta 99.77
1gwi_A 411 CYP154C1, cytochrome P450 154C1; oxidoreductase, m 99.77
2dkk_A 411 Cytochrome P450; CYP158A1, INHI oxidoreductase; HE 99.77
3lxh_A 421 Cytochrome P450; heme, iron, metal-binding, monoox 99.77
2uuq_A 414 CYP130, cytochrome P450 130; iron, heme, monooxyge 99.76
3buj_A 397 CALO2; heme, iron, metal-binding, monooxygenase, o 99.76
1lfk_A 398 OXYB, P450 monooxygenase; oxidative phenol couplin 99.74
3mgx_A 415 Putative P450 monooxygenase; cytochrome P450 oxida 99.74
3nc3_A 441 Cytochrome P450 CYPX; cytochrome P450 oxidase, HAE 99.73
3oft_A 396 Cytochrome P450, CYP101C1; oxidoreductase; HET: HE 99.71
3rwl_A 426 Cytochrome P450 alkane hydroxylase 1 CYP153A7; P45 99.68
3b4x_A 367 367AA long hypothetical cytochrome P450; HEM prote 99.67
2wiy_A 394 XPLA-heme, cytochrome P450-like protein XPLA; CYT- 99.67
1n40_A 396 P450 MT2, cytochrome P450 121; heme binding, oxyge 99.65
3p3o_A 416 Cytochrome P450; monooxygenase, oxidoreductase; HE 99.62
1io7_A 368 Cytochrome P450 CYP119; thermophilic, cytochromo P 99.61
2rfb_A 343 Cytochrome P450; heme, iron, metal-binding, monoox 99.58
4dxy_A 417 Cytochrome P450, CYP101D2; cytochrome P450 mutant, 99.44
4dnj_A 412 Putative cytochrome P450; oxidoreductase; HET: HEM 99.36
2yjn_B 381 Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; 98.48
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A* Back     alignment and structure
Probab=100.00  E-value=1.3e-31  Score=223.85  Aligned_cols=226  Identities=22%  Similarity=0.335  Sum_probs=176.6

Q ss_pred             CCCCCCCCCCCCCeeeccccCC--CCchHHHHHHHHHhCCceEEeccCeeEEEecCHHHHHHHHHhcCCCCCCCCchhhh
Q 039787           36 GSEQQPPGPTPYPVIGNLLELG--DKPHKSLAKLAKIHGPIMTLKFGQVTTVVVSSASMAKAILQNHDSSFCNRMVPDAA  113 (278)
Q Consensus        36 ~~~~~~pgp~~~p~~g~~~~~~--~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~dp~~~~~i~~~~~~~~~~~~~~~~~  113 (278)
                      +..+.||||+++|++||++.+.  +.++..+.+|+++|||||++++|+.+.|+++||+++++++.++...|.+++.....
T Consensus         5 ~~~~~PPgP~~lPliGnl~~l~~~~~~~~~~~~~~~kYG~i~~~~~g~~~~vvv~~p~~~k~il~~~~~~f~~rp~~~~~   84 (494)
T 3swz_A            5 TGAKYPKSLLSLPLVGSLPFLPRHGHMHNNFFKLQKKYGPIYSVRMGTKTTVIVGHHQLAKEVLIKKGKDFSGRPQMATL   84 (494)
T ss_dssp             -------CCBCCCEEEEESSCTTSSCHHHHHHHTHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTBBCCCCHHH
T ss_pred             CCCCCCCCCCCCCeEcchHHhCCCCchhHHHHHHHHHcCCEEEEEeCCCCEEEECCHHHHHHHHHhCcHhhCCCCCcHHH
Confidence            3467899999999999999883  35788999999999999999999999999999999999999888899988876655


Q ss_pred             hhcccCcccccccCCCchHHHHHhhhhhhccCc--chhhhhHHHHHHHHHHHHHHHHHhccCCCccchHHHHHHHHHHHH
Q 039787          114 CSYNHQEIGMVWLPVSTPWKNLRKICNLHIFSS--HKLDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAVFNTSLNVL  191 (278)
Q Consensus       114 ~~~~~~g~~~~~~~~g~~w~~~R~~~~~~~f~~--~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~~~~~~~~vi  191 (278)
                      ..+...+.|++++++|+.|+.+|++++ ++|+.  ..+..+.+.+.++++.+++.+.+  ..+.++|+.+.+..+++|+|
T Consensus        85 ~~~~~~~~gl~~~~~g~~wr~~Rr~~~-~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~--~~~~~vd~~~~~~~~t~dvi  161 (494)
T 3swz_A           85 DIASNNRKGIAFADSGAHWQLHRRLAM-ATFALFKDGDQKLEKIICQEISTLCDMLAT--HNGQSIDISFPVFVAVTNVI  161 (494)
T ss_dssp             HHHTTTTCSSSSSCSSHHHHHHHHHHH-HHTTTTSSSTTCHHHHHHHHHHHHHHHHHH--TTTEEECCHHHHHHHHHHHH
T ss_pred             HHhccCCCCeEeCCCCHHHHHHHHHHH-HHHHHhcchHHHHHHHHHHHHHHHHHHHHH--cCCCcccHHHHHHHHHHHHH
Confidence            555444678888877999999999999 98874  55778899999999999999974  25678999999999999999


Q ss_pred             HHHHhcccccC--ccHHHHHHHHHHHHHHhCCCccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 039787          192 SNTIFSVDLVD--PTAREFKDIVWGIMTELGKPNLSDNFPLLKKLDLQGIRRRMTIHYSKIFEVFDRLIDQRLDQR  265 (278)
Q Consensus       192 ~~~~fG~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  265 (278)
                      +.++||.++..  +....+......+........+.+++||++++| ....++..+..+.+.++++++++++++..
T Consensus       162 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~p-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  236 (494)
T 3swz_A          162 SLICFNTSYKNGDPELNVIQNYNEGIIDNLSKDSLVDLVPWLKIFP-NKTLEKLKSHVKIRNDLLNKILENYKEKF  236 (494)
T ss_dssp             HHHHHSCCCCTTCTHHHHHHHHHHHHHHHHCSSSSCCSSCGGGTSC-CSHHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred             HHHHcCCcCCCCCHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcC-cHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            99999999832  222333333444444444445777889988873 34456677788888889999998877543
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens} Back     alignment and structure
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens} Back     alignment and structure
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus} Back     alignment and structure
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* 4gl5_A* 4gl7_A* Back     alignment and structure
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A* Back     alignment and structure
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A* Back     alignment and structure
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A* Back     alignment and structure
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3tik_A* 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A* Back     alignment and structure
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A* Back     alignment and structure
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A* Back     alignment and structure
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A* Back     alignment and structure
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A* Back     alignment and structure
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A* Back     alignment and structure
>3ld6_A Lanosterol 14-alpha demethylase; cytochrome P450, ketoconazole, S genomics, structural genomics consortium, SGC; HET: HEM KKK BCD; 2.80A {Homo sapiens} PDB: 3juv_A* 3jus_A* Back     alignment and structure
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ... Back     alignment and structure
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A* Back     alignment and structure
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A* Back     alignment and structure
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A* Back     alignment and structure
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A* Back     alignment and structure
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* 4enh_A* 4fia_A* Back     alignment and structure
>3v8d_A Cholesterol 7-alpha-monooxygenase; cytochrome, oxidoreductase; HET: HEM 0GV; 1.90A {Homo sapiens} PDB: 3sn5_A* 3dax_A* Back     alignment and structure
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide monooxygenase, antibiotic biosynthesis, heme, iron, metal-binding; HET: HEM PXI; 1.7A {Streptomyces venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A* 2vz7_A* 2vsj_A* 2wi9_A* 2whw_A* Back     alignment and structure
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A* Back     alignment and structure
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A* Back     alignment and structure
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A* Back     alignment and structure
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR, atomic resolutio structural genomics/proteomics initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum} SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A* 1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A* 1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A* Back     alignment and structure
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A {Amycolatopsis orientalis} SCOP: a.104.1.1 Back     alignment and structure
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.50A {Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A* 3cv9_A* Back     alignment and structure
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A {Pseudomonas SP} SCOP: a.104.1.1 Back     alignment and structure
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A* Back     alignment and structure
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A* Back     alignment and structure
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes teichomyceticus} SCOP: a.104.1.0 PDB: 3o1a_A* Back     alignment and structure
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A* Back     alignment and structure
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase, metal-binding, AN biosynthesis, TIE-ROD mechanism of action; HET: HEM; 1.59A {Saccharopolyspora erythraea} PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A* Back     alignment and structure
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron, metal-binding, oxidoreductase, substrate-soaking, cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB: 1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A* 2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A* 1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ... Back     alignment and structure
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron, metal-binding, oxidoreductase; HET: HEM; 1.35A {Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A* 3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A* Back     alignment and structure
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2, anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A {Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A* 2d0e_A* 1t93_A* 2d09_A* 3tzo_A* Back     alignment and structure
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding; HET: HEM; 2.30A {Streptomyces avermitilis} Back     alignment and structure
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding, oxidoreductase-antibiotic complex; HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB: 3e5j_A* 3e5k_A* 3e5l_A* Back     alignment and structure
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding, oxidoreductase, omega-hydroxylation, iron, heme, fatty acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium tuberculosis} PDB: 2wm4_A* Back     alignment and structure
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A* Back     alignment and structure
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET: HEM; 2.90A {Streptomyces coelicolor} PDB: 4fxb_A* Back     alignment and structure
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus subtilis} SCOP: a.104.1.0 PDB: 3ejd_B* 3eje_B* Back     alignment and structure
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} Back     alignment and structure
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase; HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP: a.104.1.1 Back     alignment and structure
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin, oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A* 1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A* Back     alignment and structure
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis; HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB: 2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A* Back     alignment and structure
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A {Streptomyces natalensis} PDB: 2x9p_A* Back     alignment and structure
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox oxidoreductase; HET: HEM; 1.75A {Pseudonocardia autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A* Back     alignment and structure
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM; 1.60A {Mycobacterium tuberculosis} Back     alignment and structure
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM EDO; 1.37A {Citrobacter braakii} PDB: 4fmx_A* 4fyz_A* 1t2b_A* 3bdz_A* 3be0_A* Back     alignment and structure
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A* Back     alignment and structure
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A {Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A* 1pkf_A* Back     alignment and structure
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105, oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea recticatena} Back     alignment and structure
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB: 2z3u_A* 3a1l_A* Back     alignment and structure
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12; 1.89A {Mycobacterium smegmatis} PDB: 3r9c_A* Back     alignment and structure
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide antibiotics, 12- and 14- carbon macrolactone monooxygenase, heme; HET: HEM; 1.92A {Streptomyces coelicolor} SCOP: a.104.1.1 Back     alignment and structure
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A {Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A* Back     alignment and structure
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} SCOP: a.104.1.0 PDB: 3lxi_A* Back     alignment and structure
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase, metal-binding, oxidoreductase, hypothetical protein; HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB: 2uvn_A* 2whf_A* 2wh8_A* 2wgy_A* Back     alignment and structure
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta binding protein; HET: HEM; 2.47A {Micromonospora echinospora} Back     alignment and structure
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450 vancomycin, oxidoreductase; HET: HEM; 1.70A {Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A* 1lgf_A* Back     alignment and structure
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein, vancomycin biosynthes carrier protein, oxidoreductase; HET: HEM; 2.10A {Amycolatopsis balhimycina} Back     alignment and structure
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein, oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB: 3nc5_A* 3nc6_A* 3nc7_A* Back     alignment and structure
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A {Novosphingobium aromaticivorans} PDB: 3ofu_A* Back     alignment and structure
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase, oxidoreductase; HET: HEM; 2.00A {Sphingopyxis macrogoltabida} Back     alignment and structure
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.94A {Sulfolobus tokodaii} PDB: 1ue8_A* Back     alignment and structure
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX, bioremediation, electron transport; HET: HEM; 1.49A {Rhodococcus} PDB: 2wiv_A* Back     alignment and structure
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450 fold, structural genomics, PSI, protein structure initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A* 3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A* Back     alignment and structure
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A {Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A* Back     alignment and structure
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: HEM; 1.50A {Sulfolobus solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A* 1io9_A* 1io8_A* Back     alignment and structure
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus} PDB: 2rfc_A* Back     alignment and structure
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent, mono-oxygenases, oxidoreductase; HET: HEM; 2.00A {Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A* Back     alignment and structure
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A {Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A* 4dnz_A* Back     alignment and structure
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 278
d1po5a_ 465 a.104.1.1 (A:) Mammalian cytochrome p450 2b4 {Rabb 2e-26
d3czha1 463 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2 4e-26
d1tqna_ 472 a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Huma 1e-24
d1r9oa_ 467 a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Huma 2e-24
d2ij2a1 453 a.104.1.1 (A:3-455) Cytochrome P450 bm-3 {Bacillus 3e-24
d2ciba1 445 a.104.1.1 (A:5-449) Cytochrome p450 14 alpha-stero 3e-19
d1izoa_ 411 a.104.1.1 (A:) Cytochrome p450 152a1 (Bs-beta) {Ba 4e-13
d1odoa_ 401 a.104.1.1 (A:) Cyp154a1 monooxygenase {Streptomyce 1e-07
d1n97a_ 385 a.104.1.1 (A:) Cyp175a1 {Thermus thermophilus [Tax 2e-07
d1ueda_ 403 a.104.1.1 (A:) p450 monoxygenase OxyC {Amycolatops 1e-04
>d1po5a_ a.104.1.1 (A:) Mammalian cytochrome p450 2b4 {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 465 Back     information, alignment and structure

class: All alpha proteins
fold: Cytochrome P450
superfamily: Cytochrome P450
family: Cytochrome P450
domain: Mammalian cytochrome p450 2b4
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score =  105 bits (261), Expect = 2e-26
 Identities = 41/235 (17%), Positives = 85/235 (36%), Gaps = 7/235 (2%)

Query: 41  PPGPTPYPVIGNLLELGDK-PHKSLAKLAKIHGPIMTLKFGQVTTVVVSSASMAKAILQN 99
           PPGP+P PV+GNLL++  K   +S  +L + +G + T+  G    VV+      +  L +
Sbjct: 4   PPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVD 63

Query: 100 HDSSFCNRMVPDAACSYNHQEIGMVWLPVSTPWKNLRKICNLHIFSSHKLDANQDIRRKK 159
              +F  R           Q  G+++      W+ LR+     +        + + R ++
Sbjct: 64  QAEAFSGRGKIAVV-DPIFQGYGVIFANGER-WRALRRFSLATMRDFGMGKRSVEERIQE 121

Query: 160 IKHLLAYVEENCRVGQAIVIGQAVFNTSLNVLSNTIF--SVDLVDPTAREFKDIVWGIMT 217
               L   E     G  +       + + N++ + +F    D  DP      D+ +   +
Sbjct: 122 EARCL-VEELRKSKGALLDNTLLFHSITSNIICSIVFGKRFDYKDPVFLRLLDLFFQSFS 180

Query: 218 ELGKPNLSDNFPLLKKLD-LQGIRRRMTIHYSKIFEVFDRLIDQRLDQRQEHGYN 271
            +   +          L    G  R++  +  +I     + +++           
Sbjct: 181 LISSFSSQVFELFSGFLKHFPGTHRQIYRNLQEINTFIGQSVEKHRATLDPSNPR 235
>d3czha1 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2R1 {Human (Homo sapiens) [TaxId: 9606]} Length = 463 Back     information, alignment and structure
>d1tqna_ a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Human (Homo sapiens) [TaxId: 9606]} Length = 472 Back     information, alignment and structure
>d1r9oa_ a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Human (Homo sapiens) [TaxId: 9606]} Length = 467 Back     information, alignment and structure
>d2ij2a1 a.104.1.1 (A:3-455) Cytochrome P450 bm-3 {Bacillus megaterium [TaxId: 1404]} Length = 453 Back     information, alignment and structure
>d2ciba1 a.104.1.1 (A:5-449) Cytochrome p450 14 alpha-sterol demethylase (cyp51) {Mycobacterium tuberculosis [TaxId: 1773]} Length = 445 Back     information, alignment and structure
>d1izoa_ a.104.1.1 (A:) Cytochrome p450 152a1 (Bs-beta) {Bacillus subtilis [TaxId: 1423]} Length = 411 Back     information, alignment and structure
>d1odoa_ a.104.1.1 (A:) Cyp154a1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]} Length = 401 Back     information, alignment and structure
>d1n97a_ a.104.1.1 (A:) Cyp175a1 {Thermus thermophilus [TaxId: 274]} Length = 385 Back     information, alignment and structure
>d1ueda_ a.104.1.1 (A:) p450 monoxygenase OxyC {Amycolatopsis orientalis [TaxId: 31958]} Length = 403 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query278
d2ij2a1 453 Cytochrome P450 bm-3 {Bacillus megaterium [TaxId: 99.97
d1tqna_ 472 Mammalian cytochrome P450 3a4 {Human (Homo sapiens 99.96
d2ciba1 445 Cytochrome p450 14 alpha-sterol demethylase (cyp51 99.95
d1r9oa_ 467 Mammalian cytochrome p450 2c9 {Human (Homo sapiens 99.95
d3czha1 463 Vitamin D 25-hydroxylase Cyp2R1 {Human (Homo sapie 99.94
d1po5a_ 465 Mammalian cytochrome p450 2b4 {Rabbit (Oryctolagus 99.93
d1izoa_ 411 Cytochrome p450 152a1 (Bs-beta) {Bacillus subtilis 99.89
d1n97a_ 385 Cyp175a1 {Thermus thermophilus [TaxId: 274]} 99.86
d1odoa_ 401 Cyp154a1 monooxygenase {Streptomyces coelicolor [T 99.73
d1ueda_ 403 p450 monoxygenase OxyC {Amycolatopsis orientalis [ 99.72
d1jfba_ 399 Cytochrome P450-NOR, nitric reductase {Fungus (Fus 99.68
d1gwia_ 403 Cyp154c1 monooxygenase {Streptomyces coelicolor [T 99.68
d1z8oa1 402 Cytochrome P450-ERYF {Saccharopolyspora erythraea 99.64
d1re9a_ 404 Cytochrome P450-CAM {Pseudomonas putida [TaxId: 30 99.51
d1s1fa_ 399 Cyp158a2 {Streptomyces coelicolor [TaxId: 1902]} 99.5
d1lfka_ 394 p450 monoxygenase OxyB {Amycolatopsis orientalis [ 99.48
d1q5da_ 401 Cytochrome P450epok {Sorangium cellulosum [TaxId: 99.46
d1cpta_ 428 Cytochrome P450-TERP {Pseudomonas sp. [TaxId: 306] 99.45
d1n40a_ 395 Cyp121 monooxygenase (P450 Mt2) {Mycobacterium tub 99.17
d1io7a_ 366 Cyp119 {Archaeon Sulfolobus solfataricus [TaxId: 2 98.98
d1ue8a_ 367 Cyp119 {Archaeon Sulfolobus tokodaii [TaxId: 11195 98.73
d2f9da1114 Pre-mRNA branch site protein p14 {Human (Homo sapi 84.68
>d2ij2a1 a.104.1.1 (A:3-455) Cytochrome P450 bm-3 {Bacillus megaterium [TaxId: 1404]} Back     information, alignment and structure
class: All alpha proteins
fold: Cytochrome P450
superfamily: Cytochrome P450
family: Cytochrome P450
domain: Cytochrome P450 bm-3
species: Bacillus megaterium [TaxId: 1404]

Probab=99.97  E-value=2.6e-29  Score=205.80  Aligned_cols=219  Identities=17%  Similarity=0.197  Sum_probs=164.8

Q ss_pred             CCCCCCCCCeeeccccC-CCCchHHHHHHHHHhCCceEEeccCeeEEEecCHHHHHHHHHhcCCCCCCCCchhhhhhccc
Q 039787           40 QPPGPTPYPVIGNLLEL-GDKPHKSLAKLAKIHGPIMTLKFGQVTTVVVSSASMAKAILQNHDSSFCNRMVPDAACSYNH  118 (278)
Q Consensus        40 ~~pgp~~~p~~g~~~~~-~~~~~~~~~~~~~~yG~i~~~~~~~~~~v~i~dp~~~~~i~~~~~~~~~~~~~~~~~~~~~~  118 (278)
                      .+|||.++|++||++.+ ..+++.++.+|+++|||||++++++.++|+++||+++++++.++...+..+........+. 
T Consensus         2 ~iPGP~~~p~lG~l~~l~~~~~~~~~~~~~~kyG~if~~~~~~~~~vvl~~~~~i~~v~~~~~~~~~~~~~~~~~~~~~-   80 (453)
T d2ij2a1           2 EMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDESRFDKNLSQALKFVRDFA-   80 (453)
T ss_dssp             CCCCCCCCGGGTTGGGGCSSCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHTCTTTEEECCCHHHHHHHHHH-
T ss_pred             CCccCCCcchhhCHHHhCCCCHHHHHHHHHHHhCCEEEEEeCCceEEEECCHHHHHHHHhcCCcccccccHhHHHHHhc-
Confidence            57999999999999988 5668999999999999999999999999999999999999976555554443333333332 


Q ss_pred             Cccccccc-CCCchHHHHHhhhhhhccCcchhhhhHHHHHHHHHHHHHHHHHhccCCCccchHHHHHHHHHHHHHHHHhc
Q 039787          119 QEIGMVWL-PVSTPWKNLRKICNLHIFSSHKLDANQDIRRKKIKHLLAYVEENCRVGQAIVIGQAVFNTSLNVLSNTIFS  197 (278)
Q Consensus       119 ~g~~~~~~-~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~vd~~~~~~~~~~~vi~~~~fG  197 (278)
                       |.|+++. .+|+.|+++|+++. +.|+.++++.+.+.+.++++++++.|.+. .+++++|+.+++..+++|+++.++||
T Consensus        81 -g~~~~~~~~~g~~wk~~Rk~l~-~~fs~~~l~~~~~~i~~~~~~li~~l~~~-~~~~~idl~~~~~~~~~~~i~~~~fG  157 (453)
T d2ij2a1          81 -GDGLFTSWTHEKNWKKAHNILL-PSFSQQAMKGYHAMMVDIAVQLVQKWERL-NADEHIEVPEDMTRLTLDTIGLCGFN  157 (453)
T ss_dssp             -TTSGGGSCTTSHHHHHHHHHHG-GGGSTTTHHHHHHHHHHHHHHHHHHHHTC-CTTCCEEHHHHHHHHHHHHHHHHHHS
T ss_pred             -CCcEEecCCChHHHHHHHHHHH-HHhhhhhhhhhhhhHHHHHHHHHHHhhhc-CCCCccchHHHHHHHhhhcchhcccc
Confidence             5677654 36999999999999 99999999999999999999999999753 35778999999999999999999999


Q ss_pred             cccc---CccHHHHH-HHHHHHHHHhCCCccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 039787          198 VDLV---DPTAREFK-DIVWGIMTELGKPNLSDNFPLLKKLDLQGIRRRMTIHYSKIFEVFDRLIDQRLDQRQ  266 (278)
Q Consensus       198 ~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~  266 (278)
                      .+++   .+...++. .....+......  +....|+...  +....+...++.+.+.++++++|+++++..+
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~  226 (453)
T d2ij2a1         158 YRFNSFYRDQPHPFITSMVRALDEAMNK--LQRANPDDPA--YDENKRQFQEDIKVMNDLVDKIIADRKASGE  226 (453)
T ss_dssp             CCCCGGGCSSCCHHHHHHHHHHHHHHHT--C---CTTSGG--GHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred             cccchhhhccchHHHHhhhhccchhhhh--hhhccccccc--chhhHHHHHHHHHHHHHHHHHHHhhhccccc
Confidence            9872   12222222 222222222221  2222333222  3444567778888999999999998877543
>d1tqna_ a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2ciba1 a.104.1.1 (A:5-449) Cytochrome p450 14 alpha-sterol demethylase (cyp51) {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1r9oa_ a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d3czha1 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2R1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1po5a_ a.104.1.1 (A:) Mammalian cytochrome p450 2b4 {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d1izoa_ a.104.1.1 (A:) Cytochrome p450 152a1 (Bs-beta) {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1n97a_ a.104.1.1 (A:) Cyp175a1 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1odoa_ a.104.1.1 (A:) Cyp154a1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1ueda_ a.104.1.1 (A:) p450 monoxygenase OxyC {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure
>d1jfba_ a.104.1.1 (A:) Cytochrome P450-NOR, nitric reductase {Fungus (Fusarium oxysporum) [TaxId: 5507]} Back     information, alignment and structure
>d1gwia_ a.104.1.1 (A:) Cyp154c1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1z8oa1 a.104.1.1 (A:3-404) Cytochrome P450-ERYF {Saccharopolyspora erythraea [TaxId: 1836]} Back     information, alignment and structure
>d1re9a_ a.104.1.1 (A:) Cytochrome P450-CAM {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1s1fa_ a.104.1.1 (A:) Cyp158a2 {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1lfka_ a.104.1.1 (A:) p450 monoxygenase OxyB {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure
>d1q5da_ a.104.1.1 (A:) Cytochrome P450epok {Sorangium cellulosum [TaxId: 56]} Back     information, alignment and structure
>d1cpta_ a.104.1.1 (A:) Cytochrome P450-TERP {Pseudomonas sp. [TaxId: 306]} Back     information, alignment and structure
>d1n40a_ a.104.1.1 (A:) Cyp121 monooxygenase (P450 Mt2) {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1io7a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Back     information, alignment and structure
>d1ue8a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus tokodaii [TaxId: 111955]} Back     information, alignment and structure
>d2f9da1 d.58.7.1 (A:12-125) Pre-mRNA branch site protein p14 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure