Citrus Sinensis ID: 039845
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 210 | ||||||
| 255540939 | 395 | conserved hypothetical protein [Ricinus | 0.857 | 0.455 | 0.589 | 6e-63 | |
| 224124154 | 397 | predicted protein [Populus trichocarpa] | 0.857 | 0.453 | 0.575 | 2e-56 | |
| 449520752 | 393 | PREDICTED: uncharacterized protein LOC10 | 0.928 | 0.496 | 0.495 | 4e-51 | |
| 449448372 | 393 | PREDICTED: uncharacterized protein LOC10 | 0.928 | 0.496 | 0.491 | 2e-50 | |
| 225456693 | 395 | PREDICTED: uncharacterized protein LOC10 | 0.857 | 0.455 | 0.520 | 1e-49 | |
| 255635341 | 399 | unknown [Glycine max] | 0.852 | 0.448 | 0.513 | 1e-49 | |
| 147842467 | 442 | hypothetical protein VITISV_034573 [Viti | 0.857 | 0.407 | 0.520 | 2e-49 | |
| 356512445 | 399 | PREDICTED: uncharacterized protein LOC10 | 0.852 | 0.448 | 0.509 | 3e-49 | |
| 18394662 | 399 | uncharacterized protein [Arabidopsis tha | 0.852 | 0.448 | 0.513 | 8e-48 | |
| 356562814 | 394 | PREDICTED: uncharacterized protein LOC10 | 0.847 | 0.451 | 0.5 | 3e-47 |
| >gi|255540939|ref|XP_002511534.1| conserved hypothetical protein [Ricinus communis] gi|223550649|gb|EEF52136.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
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Score = 245 bits (626), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 129/219 (58%), Positives = 154/219 (70%), Gaps = 39/219 (17%)
Query: 1 ILNPYLEKISEKVGISTRINRSDSGYTRGLIEKVGFLMGRDVASLVLEACIRLRIWELVE 60
ILNP+LEK+ EK+GIS ++ SD+GYT+ LIEK+GFLMGRDV LVLEAC+ L IW+LVE
Sbjct: 91 ILNPFLEKMGEKIGISVGVSSSDNGYTQVLIEKIGFLMGRDVTGLVLEACLSLEIWDLVE 150
Query: 61 TLIVHGL------------------------------------LLCILKYFLCPLQDAYG 84
TLI+ GL LLCILKYFLCP ++AY
Sbjct: 151 TLIIKGLVDYSCYSNLVKNLVANKRSDLLCLSIKHAPDLGLSELLCILKYFLCPSKEAYS 210
Query: 85 SMGSVRMEWESQALLAIEKASDENPSRKQLCLAKEASILLMVAHDGFSISELCLRYLLAS 144
+M +VR EWESQALLAIEK ++N K+L +AKEA+ILLM+AHDGFS SELCL YLLAS
Sbjct: 211 AMANVRKEWESQALLAIEKVRNKNLPDKKLRVAKEAAILLMLAHDGFSTSELCLHYLLAS 270
Query: 145 SNIDEVMLSSAISNLNG---MSLIRYLGKWLKKFETFPQ 180
NIDEV+LSS+I LNG MS I+YLGKWLKK+ETFPQ
Sbjct: 271 VNIDEVILSSSIGKLNGKEMMSFIKYLGKWLKKYETFPQ 309
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224124154|ref|XP_002330118.1| predicted protein [Populus trichocarpa] gi|222871252|gb|EEF08383.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|449520752|ref|XP_004167397.1| PREDICTED: uncharacterized protein LOC101225330 [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|449448372|ref|XP_004141940.1| PREDICTED: uncharacterized protein LOC101222166 [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|225456693|ref|XP_002273275.1| PREDICTED: uncharacterized protein LOC100257068 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|255635341|gb|ACU18024.1| unknown [Glycine max] | Back alignment and taxonomy information |
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| >gi|147842467|emb|CAN63140.1| hypothetical protein VITISV_034573 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|356512445|ref|XP_003524929.1| PREDICTED: uncharacterized protein LOC100817544 [Glycine max] | Back alignment and taxonomy information |
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| >gi|18394662|ref|NP_564065.1| uncharacterized protein [Arabidopsis thaliana] gi|6730701|gb|AAF27096.1|AC011809_5 Unknown protein [Arabidopsis thaliana] gi|15810347|gb|AAL07061.1| unknown protein [Arabidopsis thaliana] gi|20465593|gb|AAM20279.1| unknown protein [Arabidopsis thaliana] gi|332191650|gb|AEE29771.1| uncharacterized protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|356562814|ref|XP_003549663.1| PREDICTED: uncharacterized protein LOC100806052 [Glycine max] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 210 | ||||||
| TAIR|locus:2034969 | 399 | AT1G18850 "AT1G18850" [Arabido | 0.533 | 0.280 | 0.663 | 1.6e-49 |
| TAIR|locus:2034969 AT1G18850 "AT1G18850" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 373 (136.4 bits), Expect = 1.6e-49, Sum P(2) = 1.6e-49
Identities = 77/116 (66%), Positives = 90/116 (77%)
Query: 68 LLCILKYFLCPLQDAYGSMGSVRMEWESQALLAIEKASDENPSRKQLCLAKEASILLMVA 127
LL ILKYFLCP ++A +M VR EWESQA+LAIEK S+ S+K +A+EASILLMVA
Sbjct: 201 LLSILKYFLCPSKEAISTMAKVREEWESQAMLAIEKVSNTELSKKSK-VAEEASILLMVA 259
Query: 128 HDGFSISELCLRYLLASSNIDEVMLSSAISNLNGM---SLIRYLGKWLKKFETFPQ 180
HDGFS SELCL YLLAS N+DEVM +SA+S LNG S IRYL KW+KK+E FPQ
Sbjct: 260 HDGFSTSELCLHYLLASRNVDEVMFASAVSKLNGNEMGSFIRYLSKWMKKYEMFPQ 315
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| eugene3.01290009 | hypothetical protein (397 aa) | |||||||
(Populus trichocarpa) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
No hit with probability above 80.00
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00