Citrus Sinensis ID: 039851

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110----
Protein Sequence
MASLNFIFGLLGNLTTGLVYLSPAKTFWHIVQRRSTEEFESIPYISKLLNAYFWVWYGIVKPNSVLVASVNGFGAALEIIYVIIFLIFAPPMMRGRTAVLAGVCDVVFPGTTVL
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHccccccEEEEEEEHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHEEEc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHHHccccHHHHHHEcccccccccHHHHHHHHHHHHHHHHHHHccccEEEEEEcHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHc
Coil and Loop (DISEMBL)
MASLNFIFGLLGNLTtglvylspaktfWHIVQRrsteefesIPYISKLLNAYFWVWYGIVKPNSVLVASVNGFGAALEIIYVIIFLIfappmmrgrTAVLAGVcdvvfpgttvl
Flexible Loop (DISEMBL)
MASLNFIFGLLGNLTTGLVYLSPAKTFWHIVQRRSTEEFESIPYISKLLNAYFWVWYGIVKPNSVLVASVNGFGAALEIIYVIIFLIFAPPMMRGRTAVLAGVCDVVFPGTTVL
Low Complexity Region (SEG)
MASLNFIFGLLGNLTTGLVYLSPAKTFWHIVQRRSTEEFESIPYISKLLNAYFWVWYGIVKPNSVLVASVNGFGAALEIIYVIIFLIFAPPMMRGRTAVLAGVCDVVFPGTTVL
Disordered region (IsUnstruct)
***LNFIFGLLGNLTTGLVYLSPAKTFWHIVQRRSTEEFESIPYISKLLNAYFWVWYGIVKPNSVLVASVNGFGAALEIIYVIIFLIFAPPMMRGRTAVLAGVCDVVFPG****
Disordered Region (DISOPRED)
*ASLNFIFGLLGNLTTGLVYLSPAKTFWHIVQRRSTEEFESIPYISKLLNAYFWVWYGIVKPNSVLVASVNGFGAALEIIYVIIFLIFAPPMMRGRTAVLAGVCDVVFPGTTVL
Disordered Region (DISEMBL)
MASLNFIFGLLGNLTTGLVYLSPAKTFWHIVQRRSTEEFESIPYISKLLNAYFWVWYGIVKPNSVLVASVNGFGAALEIIYVIIFLIFAPPMMRGRTAVLAGVCDVVFPGTTVL
Disordered Region (DISPRO)
*ASLNFIFGLLGNLTTGLVYLSPAKTFWHIVQRRSTEEFESIPYISKLLNAYFWVWYGIVKPNSVLVASVNGFGAALEIIYVIIFLIFAPPMMRGRTAVLAGVCDVVFPGTTVL
Transmembrane Helix (TMHMM)
iHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHHoo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHooo
TM Helix, Signal Peptide (Phobius)
oooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MASLNFIFGLLGNLTTGLVYLSPAKTFWHIVQRRSTEEFESIPYISKLLNAYFWVWYGIVKPNSVLVASVNGFGAALEIIYVIIFLIFAPPMMRGRTAVLAGVCDVVFPGTTVL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	114	2.2.26 [Sep-21-2011]
Q9LUR4	230	Bidirectional sugar trans	yes	no	0.956	0.473	0.522	4e-26
Q84WN3	241	Bidirectional sugar trans	no	no	0.956	0.452	0.495	5e-26
Q8RZQ8	273	Bidirectional sugar trans	yes	no	0.912	0.380	0.443	8e-20
Q10LN5	328	Bidirectional sugar trans	no	no	0.842	0.292	0.447	7e-19
Q60EC2	261	Bidirectional sugar trans	no	no	0.745	0.325	0.459	1e-18
B8AYH1	261	Bidirectional sugar trans	N/A	no	0.745	0.325	0.459	1e-18
Q8LR09	259	Bidirectional sugar trans	no	no	0.885	0.389	0.413	3e-18
A2WSD8	259	Bidirectional sugar trans	N/A	no	0.885	0.389	0.413	3e-18
Q9FPN0	265	Bidirectional sugar trans	N/A	no	0.771	0.332	0.431	4e-18
A2WSD3	254	Bidirectional sugar trans	N/A	no	0.885	0.397	0.413	8e-18

>sp|Q9LUR4|SWT16_ARATH Bidirectional sugar transporter SWEET16 OS=Arabidopsis thaliana GN=SWEET16 PE=2 SV=1

 Score =  116 bits (291), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 57/109 (52%), Positives = 75/109 (68%)

Query: 1   MASLNFIFGLLGNLTTGLVYLSPAKTFWHIVQRRSTEEFESIPYISKLLNAYFWVWYGIV 60
           MA L+F  G++GN+ + LV+LSP +TFW IVQRRSTEE+E  PYI  L+++  W +YGIV
Sbjct: 1   MADLSFYVGVIGNVISVLVFLSPVETFWRIVQRRSTEEYECFPYICTLMSSSLWTYYGIV 60

Query: 61  KPNSVLVASVNGFGAALEIIYVIIFLIFAPPMMRGRTAVLAGVCDVVFP 109
            P   LV++VNGFGA  E IYV+IFL F P     +T V+    +V FP
Sbjct: 61  TPGEYLVSTVNGFGALAESIYVLIFLFFVPKSRFLKTVVVVLALNVCFP 109

Mediates both low-affinity uptake and efflux of sugar across the plasma membrane.
Arabidopsis thaliana (taxid: 3702)

>sp|Q84WN3|SWT17_ARATH Bidirectional sugar transporter SWEET17 OS=Arabidopsis thaliana GN=SWEET17 PE=2 SV=2

 Score =  116 bits (290), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 54/109 (49%), Positives = 78/109 (71%)

Query: 1   MASLNFIFGLLGNLTTGLVYLSPAKTFWHIVQRRSTEEFESIPYISKLLNAYFWVWYGIV 60
           MA  +F  G++GN+ + LV+LSP +TFW IV+RRSTEE++S+PYI  LL +  W +YGIV
Sbjct: 1   MAEASFYIGVIGNVISVLVFLSPVETFWKIVKRRSTEEYKSLPYICTLLGSSLWTYYGIV 60

Query: 61  KPNSVLVASVNGFGAALEIIYVIIFLIFAPPMMRGRTAVLAGVCDVVFP 109
            P   LV++VNGFGA +E IYV +FL +AP  ++ +T  +  + +V FP
Sbjct: 61  TPGEYLVSTVNGFGALVETIYVSLFLFYAPRHLKLKTVDVDAMLNVFFP 109

Mediates both low-affinity uptake and efflux of sugar across the plasma membrane.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8RZQ8|SWT1A_ORYSJ Bidirectional sugar transporter SWEET1a OS=Oryza sativa subsp. japonica GN=SWEET1A PE=2 SV=1

 Score = 95.5 bits (236), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 47/106 (44%), Positives = 67/106 (63%), Gaps = 2/106 (1%)

Query: 5   NFIFGLLGNLTTGLVYLSPAKTFWHIVQRRSTEEFESIPYISKLLNAYFWVWYGI--VKP 62
            F FG+ GN+    ++LSP  TFW I+++RSTE+F  +PY   LLN     WYG+  V P
Sbjct: 6   RFFFGVSGNVIALFLFLSPVVTFWRIIKKRSTEDFSGVPYNMTLLNCLLSAWYGLPFVSP 65

Query: 63  NSVLVASVNGFGAALEIIYVIIFLIFAPPMMRGRTAVLAGVCDVVF 108
           N++LV ++NG G+ +E IYV+IFLIFA    R +   L G+   +F
Sbjct: 66  NNILVTTINGTGSVIEAIYVVIFLIFAERKARLKMMGLLGLVTSIF 111

Mediates both low-affinity uptake and efflux of sugar across the plasma membrane.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q10LN5|SWT16_ORYSJ Bidirectional sugar transporter SWEET16 OS=Oryza sativa subsp. japonica GN=SWEET16 PE=3 SV=1

 Score = 92.4 bits (228), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 43/96 (44%), Positives = 65/96 (67%)

Query: 1  MASLNFIFGLLGNLTTGLVYLSPAKTFWHIVQRRSTEEFESIPYISKLLNAYFWVWYGIV 60
          MA  +F  G++GN+ + LV+ SP  TF  IV+ +STEEF  +PY++ LL+   W +YG+ 
Sbjct: 1  MADPSFFVGIVGNVISILVFASPIATFRRIVRSKSTEEFRWLPYVTTLLSTSLWTFYGLH 60

Query: 61 KPNSVLVASVNGFGAALEIIYVIIFLIFAPPMMRGR 96
          KP  +L+ +VNG GAALE IYV ++L +AP   + +
Sbjct: 61 KPGGLLIVTVNGSGAALEAIYVTLYLAYAPRETKAK 96

Mediates both low-affinity uptake and efflux of sugar across the plasma membrane.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q60EC2|SWT1B_ORYSJ Bidirectional sugar transporter SWEET1b OS=Oryza sativa subsp. japonica GN=SWEET1B PE=2 SV=1

 Score = 91.7 bits (226), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 40/87 (45%), Positives = 61/87 (70%), Gaps = 2/87 (2%)

Query: 5  NFIFGLLGNLTTGLVYLSPAKTFWHIVQRRSTEEFESIPYISKLLNAYFWVWYGI--VKP 62
           F+FG+ GN+    ++LSP  TFW I++R+STE+F  +PY   L+N     WYG+  V P
Sbjct: 6  KFLFGVSGNVIALFLFLSPVPTFWRIIRRKSTEDFSGVPYNMTLINCLLSAWYGLPFVSP 65

Query: 63 NSVLVASVNGFGAALEIIYVIIFLIFA 89
          N++LV+++NG GA +E  YV++FL+FA
Sbjct: 66 NNILVSTINGAGAVIETAYVVVFLVFA 92

Mediates both low-affinity uptake and efflux of sugar across the plasma membrane.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|B8AYH1|SWT1B_ORYSI Bidirectional sugar transporter SWEET1b OS=Oryza sativa subsp. indica GN=SWEET1B PE=3 SV=1

 Score = 91.7 bits (226), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 40/87 (45%), Positives = 61/87 (70%), Gaps = 2/87 (2%)

Query: 5  NFIFGLLGNLTTGLVYLSPAKTFWHIVQRRSTEEFESIPYISKLLNAYFWVWYGI--VKP 62
           F+FG+ GN+    ++LSP  TFW I++R+STE+F  +PY   L+N     WYG+  V P
Sbjct: 6  KFLFGVSGNVIALFLFLSPVPTFWRIIRRKSTEDFSGVPYNMTLINCLLSAWYGLPFVSP 65

Query: 63 NSVLVASVNGFGAALEIIYVIIFLIFA 89
          N++LV+++NG GA +E  YV++FL+FA
Sbjct: 66 NNILVSTINGAGAVIETAYVVVFLVFA 92

Mediates both low-affinity uptake and efflux of sugar across the plasma membrane.

Oryza sativa subsp. indica (taxid: 39946)

>sp|Q8LR09|SWT6A_ORYSJ Bidirectional sugar transporter SWEET6a OS=Oryza sativa subsp. japonica GN=SWEET6A PE=3 SV=1

 Score = 90.5 bits (223), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 43/104 (41%), Positives = 70/104 (67%), Gaps = 3/104 (2%)

Query: 7   IFGLLGNLTTGLVYLSPAKTFWHIVQRRSTEEFESIPYISKLLNAYFWVWYGI--VKPNS 64
           + G++GN+ +  ++L+P  TFW I +R+  EEF++ PY++ LLN   WV+YGI  V PNS
Sbjct: 10  VVGIIGNVISFGLFLAPVPTFWRICKRKDVEEFKADPYLATLLNCMLWVFYGIPVVHPNS 69

Query: 65  VLVASVNGFGAALEIIYVIIFLIFAPPMMRGRTAVLAGVCDVVF 108
           +LV ++NG G  +E  Y++IF +++P   R R   + GV ++VF
Sbjct: 70  ILVVTINGIGLLVEGTYLLIFFLYSPNKKRLRMCAVLGV-ELVF 112

Mediates both low-affinity uptake and efflux of sugar across the plasma membrane.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|A2WSD8|SWT6A_ORYSI Bidirectional sugar transporter SWEET6a OS=Oryza sativa subsp. indica GN=SWEET6A PE=3 SV=1

 Score = 90.5 bits (223), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 43/104 (41%), Positives = 70/104 (67%), Gaps = 3/104 (2%)

Query: 7   IFGLLGNLTTGLVYLSPAKTFWHIVQRRSTEEFESIPYISKLLNAYFWVWYGI--VKPNS 64
           + G++GN+ +  ++L+P  TFW I +R+  EEF++ PY++ LLN   WV+YGI  V PNS
Sbjct: 10  VVGIIGNVISFGLFLAPVPTFWRICKRKDVEEFKADPYLATLLNCMLWVFYGIPVVHPNS 69

Query: 65  VLVASVNGFGAALEIIYVIIFLIFAPPMMRGRTAVLAGVCDVVF 108
           +LV ++NG G  +E  Y++IF +++P   R R   + GV ++VF
Sbjct: 70  ILVVTINGIGLLVEGTYLLIFFLYSPNKKRLRMCAVLGV-ELVF 112

Mediates both low-affinity uptake and efflux of sugar across the plasma membrane.

Oryza sativa subsp. indica (taxid: 39946)

>sp|Q9FPN0|NEC1_PETHY Bidirectional sugar transporter NEC1 OS=Petunia hybrida GN=NEC1 PE=2 SV=1

 Score = 89.7 bits (221), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 38/88 (43%), Positives = 65/88 (73%)

Query: 3  SLNFIFGLLGNLTTGLVYLSPAKTFWHIVQRRSTEEFESIPYISKLLNAYFWVWYGIVKP 62
           L+FIFGLLGN+ + +V+L+P  TF+ I +R+S+E +++IPY+  L +A   ++Y  ++ 
Sbjct: 8  DLSFIFGLLGNIVSFMVFLAPVPTFYKIYKRKSSEGYQAIPYMVALFSAGLLLYYAYLRK 67

Query: 63 NSVLVASVNGFGAALEIIYVIIFLIFAP 90
          N+ L+ S+NGFG A+E+ Y+ +FL +AP
Sbjct: 68 NAYLIVSINGFGCAIELTYISLFLFYAP 95

Mediates both low-affinity uptake and efflux of sugar across the plasma membrane (By similarity). Promotes the formation of phloem bundles in mid-veins. Probably involved in the development of stomium cells that control anther opening time. Required for pollen viability.

Petunia hybrida (taxid: 4102)

>sp|A2WSD3|SWT6B_ORYSI Bidirectional sugar transporter SWEET6b OS=Oryza sativa subsp. indica GN=SWEET6B PE=3 SV=1

 Score = 89.0 bits (219), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 43/104 (41%), Positives = 69/104 (66%), Gaps = 3/104 (2%)

Query: 7   IFGLLGNLTTGLVYLSPAKTFWHIVQRRSTEEFESIPYISKLLNAYFWVWYG--IVKPNS 64
           + G++GN+ +  ++L+P  TFW I +R+  EEF++ PY++ LLN   WV+YG  IV PNS
Sbjct: 10  VVGIIGNVISFGLFLAPVPTFWRICKRKDVEEFKADPYLATLLNCMLWVFYGIPIVHPNS 69

Query: 65  VLVASVNGFGAALEIIYVIIFLIFAPPMMRGRTAVLAGVCDVVF 108
           +LV ++NG G  +E  Y+ IF +++P   R R   + GV ++VF
Sbjct: 70  ILVVTINGIGLVVEGTYLFIFFLYSPNKKRLRMLAVLGV-ELVF 112

Mediates both low-affinity uptake and efflux of sugar across the plasma membrane.

Oryza sativa subsp. indica (taxid: 39946)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	114
224123066	239	predicted protein [Populus trichocarpa]	1.0	0.476	0.660	9e-37
255582276	249	conserved hypothetical protein [Ricinus	0.929	0.425	0.688	4e-36
224130420	238	predicted protein [Populus trichocarpa]	0.929	0.445	0.566	1e-28
359487649	415	PREDICTED: bidirectional sugar transport	0.947	0.260	0.537	1e-28
225431745	233	PREDICTED: bidirectional sugar transport	1.0	0.489	0.5	3e-27
217072846	246	unknown [Medicago truncatula] gi|3885230	0.938	0.434	0.514	6e-27
255551797	244	conserved hypothetical protein [Ricinus	0.929	0.434	0.528	7e-27
225450715	237	PREDICTED: bidirectional sugar transport	1.0	0.481	0.526	1e-26
363808232	201	uncharacterized protein LOC100808537 [Gl	0.938	0.532	0.532	1e-25
27754697	241	putative cytochrome c oxidoreductase [Ar	0.956	0.452	0.504	4e-25

>gi|224123066|ref|XP_002318985.1| predicted protein [Populus trichocarpa] gi|222857361|gb|EEE94908.1| predicted protein [Populus trichocarpa]

 Score =  157 bits (396), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 76/115 (66%), Positives = 96/115 (83%), Gaps = 1/115 (0%)

Query: 1   MASLNFIFGLLGNLTTGLVYLSPAKTFWHIVQRRSTEEFESIPYISKLLNAYFWVWYGIV 60
           M S+  +FG+LGN+TTGLVYLSPAKTFW I + RSTEEFESIPYI KLLNAY WV+YGI+
Sbjct: 1   MFSIITLFGILGNITTGLVYLSPAKTFWRIARNRSTEEFESIPYICKLLNAYQWVYYGII 60

Query: 61  KPNSVLVASVNGFGAALEIIYVIIFLIFAPPM-MRGRTAVLAGVCDVVFPGTTVL 114
           KPNSVLVA++NGFGA +E+++++IFL+FA    +R RTA+L GV D+VFP  + L
Sbjct: 61  KPNSVLVATINGFGAVVELVFIVIFLMFASTQKIRVRTAILFGVLDLVFPAVSFL 115

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255582276|ref|XP_002531929.1| conserved hypothetical protein [Ricinus communis] gi|223528408|gb|EEF30443.1| conserved hypothetical protein [Ricinus communis]

 Score =  155 bits (391), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 73/106 (68%), Positives = 90/106 (84%)

Query: 9   GLLGNLTTGLVYLSPAKTFWHIVQRRSTEEFESIPYISKLLNAYFWVWYGIVKPNSVLVA 68
           G+LGN+TTGLVYL+P KTFW IV  +STEEFES+PYI KL+NAY WV+YGI+KPNS+LVA
Sbjct: 17  GVLGNITTGLVYLAPVKTFWRIVVNKSTEEFESMPYICKLINAYCWVYYGILKPNSILVA 76

Query: 69  SVNGFGAALEIIYVIIFLIFAPPMMRGRTAVLAGVCDVVFPGTTVL 114
           +VNGFGA  EII+V++FL+FAPP M+  TA+LAGV DV FP   V+
Sbjct: 77  TVNGFGAVCEIIFVLLFLLFAPPRMKFITAILAGVLDVGFPAAVVI 122

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224130420|ref|XP_002328604.1| predicted protein [Populus trichocarpa] gi|222838586|gb|EEE76951.1| predicted protein [Populus trichocarpa]

 Score =  130 bits (327), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 60/106 (56%), Positives = 82/106 (77%)

Query: 1   MASLNFIFGLLGNLTTGLVYLSPAKTFWHIVQRRSTEEFESIPYISKLLNAYFWVWYGIV 60
           M SL F  G++GN+ + L++LSP  TFW I++ RSTE+FES+PY+  LLN+  W +YGI+
Sbjct: 1   MESLIFYIGVIGNVISVLMFLSPVGTFWRIIKHRSTEDFESLPYVCTLLNSSLWTYYGII 60

Query: 61  KPNSVLVASVNGFGAALEIIYVIIFLIFAPPMMRGRTAVLAGVCDV 106
           KP + LVA+VNGFG  +EIIYV +FLI+AP  MR +TA+LAG+ DV
Sbjct: 61  KPGAYLVATVNGFGILVEIIYVSLFLIYAPVKMRNKTAILAGILDV 106

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359487649|ref|XP_002278998.2| PREDICTED: bidirectional sugar transporter SWEET17-like [Vitis vinifera]

 Score =  130 bits (326), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 58/108 (53%), Positives = 86/108 (79%)

Query: 1   MASLNFIFGLLGNLTTGLVYLSPAKTFWHIVQRRSTEEFESIPYISKLLNAYFWVWYGIV 60
           MA+ +FI G++GN+ + LVYL+P KTF HIV+ RSTEEFES+PY+S LL++   ++YG+ 
Sbjct: 1   MANPSFIVGIIGNMASLLVYLAPIKTFSHIVKHRSTEEFESLPYVSTLLSSSVGIYYGVT 60

Query: 61  KPNSVLVASVNGFGAALEIIYVIIFLIFAPPMMRGRTAVLAGVCDVVF 108
           KP   L+A++NG GA ++++YV++FLI+APP +R +TA+L GV DV F
Sbjct: 61  KPGMYLLATINGLGALIQLVYVVLFLIYAPPKIRAKTAILVGVLDVGF 108

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225431745|ref|XP_002269234.1| PREDICTED: bidirectional sugar transporter SWEET17 [Vitis vinifera] gi|296083357|emb|CBI22993.3| unnamed protein product [Vitis vinifera]

 Score =  125 bits (315), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 57/114 (50%), Positives = 80/114 (70%)

Query: 1   MASLNFIFGLLGNLTTGLVYLSPAKTFWHIVQRRSTEEFESIPYISKLLNAYFWVWYGIV 60
           M SL+F  G++GN+ + LV+L+P  TFW IV+ RST++FES+PY+  LLN+  W +YGI+
Sbjct: 1   MESLSFFAGVIGNIISVLVFLAPIGTFWRIVKHRSTQDFESLPYVCTLLNSSLWTYYGII 60

Query: 61  KPNSVLVASVNGFGAALEIIYVIIFLIFAPPMMRGRTAVLAGVCDVVFPGTTVL 114
           KP  +LVA+VNGFG  +E  YV +FLI+AP  MR +T  L  + DV F    +L
Sbjct: 61  KPGEILVATVNGFGVVVEAAYVTLFLIYAPAKMRAKTVALVSLLDVGFLAAAIL 114

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|217072846|gb|ACJ84783.1| unknown [Medicago truncatula] gi|388523097|gb|AFK49610.1| unknown [Medicago truncatula]

 Score =  124 bits (312), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 55/107 (51%), Positives = 80/107 (74%)

Query: 1   MASLNFIFGLLGNLTTGLVYLSPAKTFWHIVQRRSTEEFESIPYISKLLNAYFWVWYGIV 60
           MA  +F  G++GN+ + L++LSP  TFW +++++STEEF S PYI  LLN+  W +YG +
Sbjct: 1   MADPSFFVGVIGNIISILMFLSPVPTFWRMIKKKSTEEFSSFPYICTLLNSSLWTYYGTI 60

Query: 61  KPNSVLVASVNGFGAALEIIYVIIFLIFAPPMMRGRTAVLAGVCDVV 107
           K    LVA+VNGFG  +E IY+++FLI+APP MR +TA+LAG+ DV+
Sbjct: 61  KAGEYLVATVNGFGIVVETIYILLFLIYAPPKMRVKTAILAGILDVL 107

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255551797|ref|XP_002516944.1| conserved hypothetical protein [Ricinus communis] gi|223544032|gb|EEF45558.1| conserved hypothetical protein [Ricinus communis]

 Score =  124 bits (311), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 56/106 (52%), Positives = 78/106 (73%)

Query: 9   GLLGNLTTGLVYLSPAKTFWHIVQRRSTEEFESIPYISKLLNAYFWVWYGIVKPNSVLVA 68
           G++GN+ + L++LSP  TFW I++  STEEFES+PY+  LLNA  W +YGI+KP + LVA
Sbjct: 9   GIIGNVISVLMFLSPVGTFWRIIKNESTEEFESLPYVCTLLNAALWTYYGIIKPGAYLVA 68

Query: 69  SVNGFGAALEIIYVIIFLIFAPPMMRGRTAVLAGVCDVVFPGTTVL 114
           +VNGFG  +EI+YV +FLI+AP  MR +TA+L  + DV F    +L
Sbjct: 69  TVNGFGIVVEIVYVALFLIYAPAKMRAKTAILVALLDVGFLAAAIL 114

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225450715|ref|XP_002278982.1| PREDICTED: bidirectional sugar transporter SWEET17-like [Vitis vinifera]

 Score =  123 bits (309), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 60/114 (52%), Positives = 83/114 (72%)

Query: 1   MASLNFIFGLLGNLTTGLVYLSPAKTFWHIVQRRSTEEFESIPYISKLLNAYFWVWYGIV 60
           MA+L+FI G++GN+ + L  LSP  TF  IV+ RSTEEFES+PY+S L  +  WV+YG++
Sbjct: 1   MATLSFISGVIGNIISVLYMLSPVPTFSRIVKHRSTEEFESLPYVSSLATSSLWVFYGLM 60

Query: 61  KPNSVLVASVNGFGAALEIIYVIIFLIFAPPMMRGRTAVLAGVCDVVFPGTTVL 114
           K   +L+A+VNGFG  +E++YVI+FLIFAP  MR +TA+L    +V FP   VL
Sbjct: 61  KSGGLLIATVNGFGIIIELVYVILFLIFAPTRMRAKTAILVVTLNVGFPAGVVL 114

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363808232|ref|NP_001242234.1| uncharacterized protein LOC100808537 [Glycine max] gi|255638943|gb|ACU19773.1| unknown [Glycine max]

 Score =  120 bits (301), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 57/107 (53%), Positives = 77/107 (71%)

Query: 1   MASLNFIFGLLGNLTTGLVYLSPAKTFWHIVQRRSTEEFESIPYISKLLNAYFWVWYGIV 60
           MA  +F  G++GN+ + L++LSP  TFW I +  STE+F S+PYI  LLN   W +YGI+
Sbjct: 1   MAEASFFVGVIGNIISILMFLSPVPTFWKIKKHGSTEDFSSLPYICTLLNCSLWTYYGII 60

Query: 61  KPNSVLVASVNGFGAALEIIYVIIFLIFAPPMMRGRTAVLAGVCDVV 107
           K    LVA+VNGFG  +E IY+I+FLI+AP  +RGRTA+LA + DVV
Sbjct: 61  KAGEYLVATVNGFGILMETIYIILFLIYAPKGIRGRTAILALILDVV 107

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|27754697|gb|AAO22792.1| putative cytochrome c oxidoreductase [Arabidopsis thaliana]

 Score =  118 bits (296), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 55/109 (50%), Positives = 79/109 (72%)

Query: 1   MASLNFIFGLLGNLTTGLVYLSPAKTFWHIVQRRSTEEFESIPYISKLLNAYFWVWYGIV 60
           MA  +F  G++GN+ + LV+LSP +TFW IV+RRSTEE++S+PYI  LL +  W +YGIV
Sbjct: 1   MAEASFYIGVIGNVISVLVFLSPVETFWKIVKRRSTEEYKSLPYICTLLGSSLWTYYGIV 60

Query: 61  KPNSVLVASVNGFGAALEIIYVIIFLIFAPPMMRGRTAVLAGVCDVVFP 109
            P   LV++VNGFGA +E IYV +FL +AP  ++ +T V+  + +V FP
Sbjct: 61  TPGEYLVSTVNGFGALVETIYVSLFLFYAPRHLKLKTVVVVAMLNVFFP 109

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	114
TAIR|locus:2089363	230	SWEET16 [Arabidopsis thaliana	0.956	0.473	0.522	2.5e-26
UNIPROTKB|Q8RZQ8	273	SWEET1A "Bidirectional sugar t	0.903	0.377	0.447	3.9e-21
UNIPROTKB|B8AYH1	261	SWEET1B "Bidirectional sugar t	0.956	0.417	0.419	6.3e-21
UNIPROTKB|Q60EC2	261	SWEET1B "Bidirectional sugar t	0.956	0.417	0.419	6.3e-21
UNIPROTKB|A2WSD8	259	SWEET6A "Bidirectional sugar t	0.938	0.413	0.4	1.5e-19
UNIPROTKB|Q8LR09	259	SWEET6A "Bidirectional sugar t	0.938	0.413	0.4	1.5e-19
UNIPROTKB|Q10LN5	328	SWEET16 "Bidirectional sugar t	0.789	0.274	0.477	1.9e-19
UNIPROTKB|A2WSD3	254	SWEET6B "Bidirectional sugar t	0.938	0.421	0.4	2.5e-19
UNIPROTKB|P93332	268	N3 "Bidirectional sugar transp	0.912	0.388	0.384	2.5e-19
UNIPROTKB|Q8W0K2	254	SWEET6B "Bidirectional sugar t	0.938	0.421	0.4	3.1e-19

TAIR|locus:2089363 SWEET16 [Arabidopsis thaliana (taxid:3702)]

 Score = 297 (109.6 bits), Expect = 2.5e-26, P = 2.5e-26
 Identities = 57/109 (52%), Positives = 75/109 (68%)

Query:     1 MASLNFIFGLLGNLTTGLVYLSPAKTFWHIVQRRSTEEFESIPYISKLLNAYFWVWYGIV 60
             MA L+F  G++GN+ + LV+LSP +TFW IVQRRSTEE+E  PYI  L+++  W +YGIV
Sbjct:     1 MADLSFYVGVIGNVISVLVFLSPVETFWRIVQRRSTEEYECFPYICTLMSSSLWTYYGIV 60

Query:    61 KPNSVLVASVNGFGAALEIIYVIIFLIFAPPMMRGRTAVLAGVCDVVFP 109
              P   LV++VNGFGA  E IYV+IFL F P     +T V+    +V FP
Sbjct:    61 TPGEYLVSTVNGFGALAESIYVLIFLFFVPKSRFLKTVVVVLALNVCFP 109

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0005887 "integral to plasma membrane" evidence=ISS

GO:0051119 "sugar transmembrane transporter activity" evidence=ISS

UNIPROTKB|Q8RZQ8 SWEET1A "Bidirectional sugar transporter SWEET1a" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 248 (92.4 bits), Expect = 3.9e-21, P = 3.9e-21
 Identities = 47/105 (44%), Positives = 67/105 (63%)

Query:     6 FIFGLLGNLTTGLVYLSPAKTFWHIVQRRSTEEFESIPYISKLLNAYFWVWYGI--VKPN 63
             F FG+ GN+    ++LSP  TFW I+++RSTE+F  +PY   LLN     WYG+  V PN
Sbjct:     7 FFFGVSGNVIALFLFLSPVVTFWRIIKKRSTEDFSGVPYNMTLLNCLLSAWYGLPFVSPN 66

Query:    64 SVLVASVNGFGAALEIIYVIIFLIFAPPMMRGRTAVLAGVCDVVF 108
             ++LV ++NG G+ +E IYV+IFLIFA    R +   L G+   +F
Sbjct:    67 NILVTTINGTGSVIEAIYVVIFLIFAERKARLKMMGLLGLVTSIF 111

GO:0005887 "integral to plasma membrane" evidence=ISS

GO:0051119 "sugar transmembrane transporter activity" evidence=ISS

UNIPROTKB|B8AYH1 SWEET1B "Bidirectional sugar transporter SWEET1b" [Oryza sativa Indica Group (taxid:39946)]

 Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
 Identities = 47/112 (41%), Positives = 70/112 (62%)

Query:     6 FIFGLLGNLTTGLVYLSPAKTFWHIVQRRSTEEFESIPYISKLLNAYFWVWYGI--VKPN 63
             F+FG+ GN+    ++LSP  TFW I++R+STE+F  +PY   L+N     WYG+  V PN
Sbjct:     7 FLFGVSGNVIALFLFLSPVPTFWRIIRRKSTEDFSGVPYNMTLINCLLSAWYGLPFVSPN 66

Query:    64 SVLVASVNGFGAALEIIYVIIFLIFAPP-MMRGRTAVLAGVCDVVFPGTTVL 114
             ++LV+++NG GA +E  YV++FL+FA     R RT  LA     VF    ++
Sbjct:    67 NILVSTINGAGAVIETAYVVVFLVFASTHKTRLRTLGLAAAVASVFAAVALV 118

GO:0005887 "integral to plasma membrane" evidence=ISS

GO:0051119 "sugar transmembrane transporter activity" evidence=ISS

UNIPROTKB|Q60EC2 SWEET1B "Bidirectional sugar transporter SWEET1b" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
 Identities = 47/112 (41%), Positives = 70/112 (62%)

Query:     6 FIFGLLGNLTTGLVYLSPAKTFWHIVQRRSTEEFESIPYISKLLNAYFWVWYGI--VKPN 63
             F+FG+ GN+    ++LSP  TFW I++R+STE+F  +PY   L+N     WYG+  V PN
Sbjct:     7 FLFGVSGNVIALFLFLSPVPTFWRIIRRKSTEDFSGVPYNMTLINCLLSAWYGLPFVSPN 66

Query:    64 SVLVASVNGFGAALEIIYVIIFLIFAPP-MMRGRTAVLAGVCDVVFPGTTVL 114
             ++LV+++NG GA +E  YV++FL+FA     R RT  LA     VF    ++
Sbjct:    67 NILVSTINGAGAVIETAYVVVFLVFASTHKTRLRTLGLAAAVASVFAAVALV 118

GO:0005887 "integral to plasma membrane" evidence=ISS

GO:0051119 "sugar transmembrane transporter activity" evidence=ISS

UNIPROTKB|A2WSD8 SWEET6A "Bidirectional sugar transporter SWEET6a" [Oryza sativa Indica Group (taxid:39946)]

 Score = 233 (87.1 bits), Expect = 1.5e-19, P = 1.5e-19
 Identities = 44/110 (40%), Positives = 72/110 (65%)

Query:     7 IFGLLGNLTTGLVYLSPAKTFWHIVQRRSTEEFESIPYISKLLNAYFWVWYGI--VKPNS 64
             + G++GN+ +  ++L+P  TFW I +R+  EEF++ PY++ LLN   WV+YGI  V PNS
Sbjct:    10 VVGIIGNVISFGLFLAPVPTFWRICKRKDVEEFKADPYLATLLNCMLWVFYGIPVVHPNS 69

Query:    65 VLVASVNGFGAALEIIYVIIFLIFAPPMMRGRTAVLAGVCDVVFPGTTVL 114
             +LV ++NG G  +E  Y++IF +++P   R R   + GV ++VF    +L
Sbjct:    70 ILVVTINGIGLLVEGTYLLIFFLYSPNKKRLRMCAVLGV-ELVFMLAVIL 118

GO:0005887 "integral to plasma membrane" evidence=ISS

GO:0051119 "sugar transmembrane transporter activity" evidence=ISS

UNIPROTKB|Q8LR09 SWEET6A "Bidirectional sugar transporter SWEET6a" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 233 (87.1 bits), Expect = 1.5e-19, P = 1.5e-19
 Identities = 44/110 (40%), Positives = 72/110 (65%)

Query:     7 IFGLLGNLTTGLVYLSPAKTFWHIVQRRSTEEFESIPYISKLLNAYFWVWYGI--VKPNS 64
             + G++GN+ +  ++L+P  TFW I +R+  EEF++ PY++ LLN   WV+YGI  V PNS
Sbjct:    10 VVGIIGNVISFGLFLAPVPTFWRICKRKDVEEFKADPYLATLLNCMLWVFYGIPVVHPNS 69

Query:    65 VLVASVNGFGAALEIIYVIIFLIFAPPMMRGRTAVLAGVCDVVFPGTTVL 114
             +LV ++NG G  +E  Y++IF +++P   R R   + GV ++VF    +L
Sbjct:    70 ILVVTINGIGLLVEGTYLLIFFLYSPNKKRLRMCAVLGV-ELVFMLAVIL 118

GO:0005887 "integral to plasma membrane" evidence=ISS

GO:0051119 "sugar transmembrane transporter activity" evidence=ISS

UNIPROTKB|Q10LN5 SWEET16 "Bidirectional sugar transporter SWEET16" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 232 (86.7 bits), Expect = 1.9e-19, P = 1.9e-19
 Identities = 43/90 (47%), Positives = 63/90 (70%)

Query:     1 MASLNFIFGLLGNLTTGLVYLSPAKTFWHIVQRRSTEEFESIPYISKLLNAYFWVWYGIV 60
             MA  +F  G++GN+ + LV+ SP  TF  IV+ +STEEF  +PY++ LL+   W +YG+ 
Sbjct:     1 MADPSFFVGIVGNVISILVFASPIATFRRIVRSKSTEEFRWLPYVTTLLSTSLWTFYGLH 60

Query:    61 KPNSVLVASVNGFGAALEIIYVIIFLIFAP 90
             KP  +L+ +VNG GAALE IYV ++L +AP
Sbjct:    61 KPGGLLIVTVNGSGAALEAIYVTLYLAYAP 90

GO:0005887 "integral to plasma membrane" evidence=ISS

GO:0051119 "sugar transmembrane transporter activity" evidence=ISS

UNIPROTKB|A2WSD3 SWEET6B "Bidirectional sugar transporter SWEET6b" [Oryza sativa Indica Group (taxid:39946)]

 Score = 231 (86.4 bits), Expect = 2.5e-19, P = 2.5e-19
 Identities = 44/110 (40%), Positives = 71/110 (64%)

Query:     7 IFGLLGNLTTGLVYLSPAKTFWHIVQRRSTEEFESIPYISKLLNAYFWVWYGI--VKPNS 64
             + G++GN+ +  ++L+P  TFW I +R+  EEF++ PY++ LLN   WV+YGI  V PNS
Sbjct:    10 VVGIIGNVISFGLFLAPVPTFWRICKRKDVEEFKADPYLATLLNCMLWVFYGIPIVHPNS 69

Query:    65 VLVASVNGFGAALEIIYVIIFLIFAPPMMRGRTAVLAGVCDVVFPGTTVL 114
             +LV ++NG G  +E  Y+ IF +++P   R R   + GV ++VF    +L
Sbjct:    70 ILVVTINGIGLVVEGTYLFIFFLYSPNKKRLRMLAVLGV-ELVFMLAVIL 118

GO:0005887 "integral to plasma membrane" evidence=ISS

GO:0051119 "sugar transmembrane transporter activity" evidence=ISS

UNIPROTKB|P93332 N3 "Bidirectional sugar transporter N3" [Medicago truncatula (taxid:3880)]

 Score = 231 (86.4 bits), Expect = 2.5e-19, P = 2.5e-19
 Identities = 40/104 (38%), Positives = 71/104 (68%)

Query:     3 SLNFIFGLLGNLTTGLVYLSPAKTFWHIVQRRSTEEFESIPYISKLLNAYFWVWYGIVKP 62
             +L F FG+LGN+ + LV+L+P  TF+ I +++STE F+S+PY+  L ++  W++Y ++K 
Sbjct:     7 TLAFTFGMLGNVISFLVFLAPISTFYRIYKKKSTEGFQSLPYLVALFSSMLWLYYALLKK 66

Query:    63 NSVLVASVNGFGAALEIIYVIIFLIFAPPMMRGRTAVLAGVCDV 106
             ++ L+ ++N FG  +E IY+I+++I+AP   R  T  L    +V
Sbjct:    67 DAFLLITINSFGCVVETIYIILYIIYAPRDARNLTFKLLSAMNV 110

GO:0005887 "integral to plasma membrane" evidence=ISS

GO:0051119 "sugar transmembrane transporter activity" evidence=ISS

UNIPROTKB|Q8W0K2 SWEET6B "Bidirectional sugar transporter SWEET6b" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 230 (86.0 bits), Expect = 3.1e-19, P = 3.1e-19
 Identities = 44/110 (40%), Positives = 71/110 (64%)

Query:     7 IFGLLGNLTTGLVYLSPAKTFWHIVQRRSTEEFESIPYISKLLNAYFWVWYGI--VKPNS 64
             + G++GN+ +  ++LSP  TFW I +R+  E+F++ PY++ LLN   WV+YGI  V PNS
Sbjct:    10 VVGIIGNVISFGLFLSPVPTFWRICKRKDVEQFKADPYLATLLNCMLWVFYGIPIVHPNS 69

Query:    65 VLVASVNGFGAALEIIYVIIFLIFAPPMMRGRTAVLAGVCDVVFPGTTVL 114
             +LV ++NG G  +E  Y+ IF +++P   R R   + GV ++VF    +L
Sbjct:    70 ILVVTINGIGLIVEGTYLFIFFLYSPNKKRLRMLAVLGV-ELVFMLAVIL 118

GO:0005887 "integral to plasma membrane" evidence=ISS

GO:0051119 "sugar transmembrane transporter activity" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_Genewise1_v1.C_LG_XIII0762 hypothetical protein (239 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	114
pfam03083	87	pfam03083, MtN3_slv, Sugar efflux transporter for	2e-19

>gnl|CDD|202529 pfam03083, MtN3_slv, Sugar efflux transporter for intercellular exchange

 Score = 75.7 bits (187), Expect = 2e-19
 Identities = 28/86 (32%), Positives = 51/86 (59%), Gaps = 1/86 (1%)

Query: 6  FIFGLLGNLTTGLVYLSPAKTFWHIVQRRSTEEFESIPYISKLLNAYFWVWYGIVKPNSV 65
          F+ GLL  + +  V+LSP      +++ +S E    +P+++ LL+A  W+ YG++K +  
Sbjct: 1  FLLGLLCVVFSVAVFLSPLSILRKVIKTKSVEGMPFLPFLAGLLSASLWLLYGLLKKDGY 60

Query: 66 LVASVNGFGAALEIIYVIIFLIFAPP 91
          ++   NG G  L  IY+I+F+I+ P 
Sbjct: 61 II-IPNGVGCVLGTIYLILFIIYPPK 85

This family includes proteins such as drosophila saliva, MtN3 involved in root nodule development and a protein involved in activation and expression of recombination activation genes (RAGs). Although the molecular function of these proteins is unknown, they are almost certainly transmembrane proteins. This family contains a region of two transmembrane helices that is found in two copies in most members of the family. This family also contains specific sugar efflux transporters that are essential for the maintenance of animal blood glucose levels, plant nectar production, and plant seed and pollen development. In many organisims it meditaes gluose transport; in Arabidopsis it is necessary for pollen viability; and two of the rice homologues are specifically exploited by bacterial pathogens for virulence by means of direct binding of a bacterial effector to the SWEET promoter. Length = 87

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	114
PF03083	87	MtN3_slv: Sugar efflux transporter for intercellul	99.94
KOG1623	243	consensus Multitransmembrane protein [General func	99.89
KOG1623	243	consensus Multitransmembrane protein [General func	99.78
COG4095	89	Uncharacterized conserved protein [Function unknow	99.56
PF04193	61	PQ-loop: PQ loop repeat	98.53
TIGR00951	220	2A43 Lysosomal Cystine Transporter.	97.56
smart00679	32	CTNS Repeated motif present between transmembrane	96.1
PF03650	119	MPC: Uncharacterised protein family (UPF0041); Int	95.7
TIGR00951	220	2A43 Lysosomal Cystine Transporter.	95.63
KOG1589	118	consensus Uncharacterized conserved protein [Funct	94.25
PHA02246	192	hypothetical protein	94.21
KOG2913	260	consensus Predicted membrane protein [Function unk	93.81
KOG3211	230	consensus Predicted endoplasmic reticulum membrane	88.07
PF10688	163	Imp-YgjV: Bacterial inner membrane protein; InterP	86.37
PF07578	72	LAB_N: Lipid A Biosynthesis N-terminal domain; Int	80.18

>PF03083 MtN3_slv: Sugar efflux transporter for intercellular exchange; InterPro: IPR004316 This family includes proteins such as Drosophila saliva [], MtN3 involved in root nodule development [] and proteins involved in activation and expression of recombination activation genes (RAGs) []

Probab=99.94  E-value=9e-27  Score=149.38  Aligned_cols=86  Identities=24%  Similarity=0.607  Sum_probs=83.4

Q ss_pred             HHHHHHHHHHHHHHHhhHHHHHHHHHhcCCCcccchhHHHHHHHHHHHHHHHhccCCcceEEeehHHHHHHHHHHHHHHh
Q 039851            7 IFGLLGNLTTGLVYLSPAKTFWHIVQRRSTEEFESIPYISKLLNAYFWVWYGIVKPNSVLVASVNGFGAALEIIYVIIFL   86 (114)
Q Consensus         7 i~g~~~~i~ti~~~~spl~~~~~I~k~ks~~~~s~~p~~~~~~n~~lW~~YG~l~~d~~~i~~~N~~g~~l~~~~l~~~~   86 (114)
                      ++|++|.+.++++++||+++++|++|+||+|++|+.|+++.++||.+|+.||++++| ++++.+|.+|..++.+|+.+|+
T Consensus         2 ~lg~~~~~~~i~~~~spl~~i~~v~k~ks~~~~~~~~~~~~~~~~~~W~~YG~l~~d-~~i~~~N~~g~~~~~~~~~~~~   80 (87)
T PF03083_consen    2 VLGILASVSSIIMFLSPLPQIRQVIKTKSTGSVSFPPFLAMFFNCVLWLIYGILIND-WPIIVPNVFGLVLSIIYLVVYY   80 (87)
T ss_pred             eeeHHHHHHHHHHHHHHHHHHHHHHhCCCCCccceehhHHHhhhccHhhhhhhhcCC-eeEEeeHHHHHHHHHHHHhheE
Confidence            478999999999999999999999999999999999999999999999999999999 8999999999999999999999


Q ss_pred             hccCCCc
Q 039851           87 IFAPPMM   93 (114)
Q Consensus        87 ~y~~~~~   93 (114)
                      +|+++||
T Consensus        81 ~y~~~~~   87 (87)
T PF03083_consen   81 IYPSKKK   87 (87)
T ss_pred             EeCCCCC
Confidence            9999875

Although the molecular function of these proteins is unknown, they are almost certainly transmembrane proteins. This signature maps to transmembrane helices which are found in two copies in most members of the family.; GO: 0016021 integral to membrane

>KOG1623 consensus Multitransmembrane protein [General function prediction only]

Probab=99.89  E-value=1.5e-23  Score=156.53  Aligned_cols=107  Identities=35%  Similarity=0.671  Sum_probs=93.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCCCcccchhHHHHHHHHHHHHHHHhccCCcceEEeehHHHHHHHHHH
Q 039851            2 ASLNFIFGLLGNLTTGLVYLSPAKTFWHIVQRRSTEEFESIPYISKLLNAYFWVWYGIVKPNSVLVASVNGFGAALEIIY   81 (114)
Q Consensus         2 ~~~~~i~g~~~~i~ti~~~~spl~~~~~I~k~ks~~~~s~~p~~~~~~n~~lW~~YG~l~~d~~~i~~~N~~g~~l~~~~   81 (114)
                      .....++|..|++.++++|++|+|+++||+|+||+|++|+.||+++++||.+|+.||.+++|+..++..|.+|+++++.|
T Consensus         3 ~~~~~l~~i~~~~is~~~fl~pv~tf~~I~KkkS~e~~s~~Pfl~~ll~~~lWl~YG~~~~~d~llitIN~~G~~ie~~Y   82 (243)
T KOG1623|consen    3 NVLLFLFGILGNIISFGVFLSPVPTFRRIRKKKSVEGFSSLPFLMGLLSCSLWLYYGLLKVHDYLLITINGIGLVIETVY   82 (243)
T ss_pred             chHHHHHHHHHHHHhHHHhhcCchhHHHhhcccCcCCCCCcCcHHHHHHHHHHHHhhhhccCceEEEEEehhcHHHHHHH
Confidence            45678999999999999999999999999999999999999999999999999999998884499999999999999999


Q ss_pred             HHHHhhccCCCchhHHHHHHHHHHHHHhhh
Q 039851           82 VIIFLIFAPPMMRGRTAVLAGVCDVVFPGT  111 (114)
Q Consensus        82 l~~~~~y~~~~~~~~~~~~~~~~~~~~~~~  111 (114)
                      +..|+.|+++||..   ++....++.++++
T Consensus        83 i~~f~~ya~~k~~~---~~~~~~~~~~~~~  109 (243)
T KOG1623|consen   83 ISIFLYYAPKKKTV---KIVLALVLGVIGL  109 (243)
T ss_pred             HHHHheecCchhee---EeeehHHHHHHHH
Confidence            99999999988732   2233444444443

>KOG1623 consensus Multitransmembrane protein [General function prediction only]

Probab=99.78  E-value=3.6e-19  Score=133.02  Aligned_cols=87  Identities=17%  Similarity=0.356  Sum_probs=82.7

Q ss_pred             HHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCCCcccchhHHHHHHHHHHHHHHHhccCCcceEEeehHHHHHHHHHHHHH
Q 039851            5 NFIFGLLGNLTTGLVYLSPAKTFWHIVQRRSTEEFESIPYISKLLNAYFWVWYGIVKPNSVLVASVNGFGAALEIIYVII   84 (114)
Q Consensus         5 ~~i~g~~~~i~ti~~~~spl~~~~~I~k~ks~~~~s~~p~~~~~~n~~lW~~YG~l~~d~~~i~~~N~~g~~l~~~~l~~   84 (114)
                      .+.+|.+|.++++++|.||+..+++++|+||+|.+|+....+.++++..|+.||++.+| ++|.+||.+|..++..|+.+
T Consensus       125 ~~~lG~vc~~~nI~~~~sPL~~m~~VIktkSvE~mPf~Ls~a~fl~a~~W~lYGlli~D-~~IaipN~iG~~l~~~QL~L  203 (243)
T KOG1623|consen  125 VSVLGIVCAVFNISMFAAPLSVIRKVIKTKSVEYMPFPLSFALFLVAVQWLLYGLLIKD-FFIAIPNVLGFLLGLIQLIL  203 (243)
T ss_pred             eeeeehhhhhhhHHhhhccHHhhhhheecCceeeechHHHHHHHHHHHHHHHHHHHhcC-eEEEcccHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999999999999999999999998 99999999999999999999


Q ss_pred             HhhccCCC
Q 039851           85 FLIFAPPM   92 (114)
Q Consensus        85 ~~~y~~~~   92 (114)
                      |++|++++
T Consensus       204 y~~y~~~~  211 (243)
T KOG1623|consen  204 YFKYPKTT  211 (243)
T ss_pred             hhhcCCCc
Confidence            99998766

>COG4095 Uncharacterized conserved protein [Function unknown]

Probab=99.56  E-value=3.3e-14  Score=90.95  Aligned_cols=86  Identities=15%  Similarity=0.282  Sum_probs=77.4

Q ss_pred             ChhHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCCCcccchhHHHHHHHHHHHHHHHhccCCcceEEeehHHHHHHHHH
Q 039851            1 MASLNFIFGLLGNLTTGLVYLSPAKTFWHIVQRRSTEEFESIPYISKLLNAYFWVWYGIVKPNSVLVASVNGFGAALEII   80 (114)
Q Consensus         1 m~~~~~i~g~~~~i~ti~~~~spl~~~~~I~k~ks~~~~s~~p~~~~~~n~~lW~~YG~l~~d~~~i~~~N~~g~~l~~~   80 (114)
                      |+...+.+|..|.+.+...   -+||..+++|+||++++|+..++.....+++|+.||++.+| .|+...|.++..++..
T Consensus         1 m~~~~~viG~ia~ilttf~---flPQ~iki~ktK~t~~Isl~~fii~~ia~~lwliygILi~~-lPii~aN~i~~il~li   76 (89)
T COG4095           1 MDFFIEVIGTIAGILTTFA---FLPQLIKIIKTKNTASISLPMFIILNIALFLWLIYGILIND-LPIIIANIISFILSLI   76 (89)
T ss_pred             CcchhhhHHHHHHHHHHHH---HHHHHHHHHhccccccccHHHHHHHHHHHHHHHHHHHHHcc-CcchhHHHHHHHHHHH
Confidence            6677888888888887765   59999999999999999999999999999999999999999 9999999999999998


Q ss_pred             HHHHHhhccC
Q 039851           81 YVIIFLIFAP   90 (114)
Q Consensus        81 ~l~~~~~y~~   90 (114)
                      -+....+|..
T Consensus        77 Il~~kI~~~~   86 (89)
T COG4095          77 ILFYKIKYIL   86 (89)
T ss_pred             HHHHHHHHHH
Confidence            8877776653

>PF04193 PQ-loop: PQ loop repeat

Probab=98.53  E-value=4.3e-07  Score=54.07  Aligned_cols=53  Identities=23%  Similarity=0.292  Sum_probs=46.0

Q ss_pred             HHHHHHHHHHHhhHHHHHHHHHhcCCCcccchhHHHHHHHHHHHHHHHhccCC
Q 039851           11 LGNLTTGLVYLSPAKTFWHIVQRRSTEEFESIPYISKLLNAYFWVWYGIVKPN   63 (114)
Q Consensus        11 ~~~i~ti~~~~spl~~~~~I~k~ks~~~~s~~p~~~~~~n~~lW~~YG~l~~d   63 (114)
                      ++.+..++...+.+||+.+.+|+||++++|...+.....++.+|+.|++..++
T Consensus         5 ~g~i~~~~~~~~~lPQi~~~~k~ks~~glS~~~~~l~~~g~~~~~~~~~~~~~   57 (61)
T PF04193_consen    5 LGIISIVLWIISFLPQIIKNYKRKSTGGLSLWFLLLWLIGSILWVLYSILSNY   57 (61)
T ss_pred             HHHHHHHHHHHHHHhHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHhcC
Confidence            34444455556889999999999999999999999999999999999999876

>TIGR00951 2A43 Lysosomal Cystine Transporter

Probab=97.56  E-value=0.00062  Score=50.56  Aligned_cols=50  Identities=16%  Similarity=0.024  Sum_probs=41.1

Q ss_pred             HHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCCCcccchhHHHHHHHHHHHHHH
Q 039851            5 NFIFGLLGNLTTGLVYLSPAKTFWHIVQRRSTEEFESIPYISKLLNAYFWVWY   57 (114)
Q Consensus         5 ~~i~g~~~~i~ti~~~~spl~~~~~I~k~ks~~~~s~~p~~~~~~n~~lW~~Y   57 (114)
                      ..++|+...+..   ..+-.||+.+..|+||++++|+..+..-..+...|..|
T Consensus         4 S~~lG~~~~~~~---~~~~~PQi~~n~k~ks~~GlS~~~~~l~~~g~~~~~~y   53 (220)
T TIGR00951         4 SQILGWGYVAAW---SISFYPQIIKNWRRKSAEGLSFDFVMLNLVGFTAYVIF   53 (220)
T ss_pred             HHHHHHHHHHHH---HHHHhhHHHHHHhccccCCcCHHHHHHHHHHHHHHHHH
Confidence            445555554444   45789999999999999999999999999999999999

>smart00679 CTNS Repeated motif present between transmembrane helices in cystinosin, yeast ERS1p, mannose-P-dolichol utilization defect 1, and other hypothetical proteins

Probab=96.10  E-value=0.0063  Score=31.37  Aligned_cols=26  Identities=19%  Similarity=0.078  Sum_probs=21.6

Q ss_pred             hhHHHHHHHHHhcCCCcccchhHHHH
Q 039851           22 SPAKTFWHIVQRRSTEEFESIPYISK   47 (114)
Q Consensus        22 spl~~~~~I~k~ks~~~~s~~p~~~~   47 (114)
                      +-+||+.+.+|+||++++|+..+...
T Consensus         2 ~~~PQi~~~~~~ks~~glS~~~~~l~   27 (32)
T smart00679        2 SLLPQIIKNYRRKSTEGLSILFVLLW   27 (32)
T ss_pred             cchhHHHHHHHcCCcCcCCHHHHHHH
Confidence            56899999999999999986665543

Function unknown, but likely to be associated with the glycosylation machinery.

>PF03650 MPC: Uncharacterised protein family (UPF0041); InterPro: IPR005336 This is a family of proteins of unknown function

Probab=95.70  E-value=0.0052  Score=41.69  Aligned_cols=60  Identities=17%  Similarity=0.252  Sum_probs=53.0

Q ss_pred             hcCCCcccchhHHHHHHHHHHHHHHHhccC-CcceEEeehHHHHHHHHHHHHHHhhccCCC
Q 039851           33 RRSTEEFESIPYISKLLNAYFWVWYGIVKP-NSVLVASVNGFGAALEIIYVIIFLIFAPPM   92 (114)
Q Consensus        33 ~ks~~~~s~~p~~~~~~n~~lW~~YG~l~~-d~~~i~~~N~~g~~l~~~~l~~~~~y~~~~   92 (114)
                      +|..|.+|..+-.+..+-+.+|..|++.+. .++.++.+|..-...+.+|+.=+..|...+
T Consensus        39 ~rppe~IS~~qt~aL~~tg~iw~Rys~~I~P~Ny~L~a~n~~~~~~q~~Ql~R~~~y~~~~   99 (119)
T PF03650_consen   39 KRPPEKISGPQTSALCATGLIWMRYSLVITPRNYLLFACNFFNATTQLYQLYRKLNYQYSQ   99 (119)
T ss_pred             CCCHHHHhHHHHHHHHHHHHHHHHHheeecCchHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            589999999999999999999999999663 348899999999999999999988887544

>TIGR00951 2A43 Lysosomal Cystine Transporter

Probab=95.63  E-value=0.12  Score=38.37  Aligned_cols=81  Identities=7%  Similarity=0.099  Sum_probs=57.2

Q ss_pred             HHHHHHHHHHHHHHhhHHHHHHHHHhcCCCcccchhHHHHHHHHHHHHHHHhccCCcceEEeehHHHHHHHHHHHHHHhh
Q 039851            8 FGLLGNLTTGLVYLSPAKTFWHIVQRRSTEEFESIPYISKLLNAYFWVWYGIVKPNSVLVASVNGFGAALEIIYVIIFLI   87 (114)
Q Consensus         8 ~g~~~~i~ti~~~~spl~~~~~I~k~ks~~~~s~~p~~~~~~n~~lW~~YG~l~~d~~~i~~~N~~g~~l~~~~l~~~~~   87 (114)
                      +..+..+--.....+-+||.+.-.|+|||++.|......-+..+..=..-....++|...+.....+..++...+.=.+.
T Consensus       139 l~~l~~iki~is~ikyiPQi~~Ny~~ksT~glSi~~i~Ld~~G~lqri~ts~~~~gd~~~l~~~~~s~~~n~i~~~Q~~~  218 (220)
T TIGR00951       139 VTMLSYIKVAVTLVKYFPQAATNYHNKSTGQLSIITVFLDFTGLLQRIFQSVNETGDPLKAGLFVVSSLFNGLFAAQVFF  218 (220)
T ss_pred             HHHHHHHHHHHHHHHHhHHHHHHHhcCCCCcCCHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHhh
Confidence            33333333444455889999999999999999998888777775544444554444477888888888888877765554


Q ss_pred             c
Q 039851           88 F   88 (114)
Q Consensus        88 y   88 (114)
                      |
T Consensus       219 y  219 (220)
T TIGR00951       219 Y  219 (220)
T ss_pred             c
Confidence            4

>KOG1589 consensus Uncharacterized conserved protein [Function unknown]

Probab=94.25  E-value=0.02  Score=38.29  Aligned_cols=59  Identities=20%  Similarity=0.255  Sum_probs=51.6

Q ss_pred             hcCCCcccchhHHHHHHHHHHHHHHHhcc-CCcceEEeehHHHHHHHHHHHHHHhhccCC
Q 039851           33 RRSTEEFESIPYISKLLNAYFWVWYGIVK-PNSVLVASVNGFGAALEIIYVIIFLIFAPP   91 (114)
Q Consensus        33 ~ks~~~~s~~p~~~~~~n~~lW~~YG~l~-~d~~~i~~~N~~g~~l~~~~l~~~~~y~~~   91 (114)
                      +|..|.+|.....+.....++|..|.+++ ..++.++.+|.+=...+.+|+.=.+.|...
T Consensus        43 arP~eklS~~q~~al~aTg~IWtRySlVI~PkN~~LfsVN~f~~~tg~~QL~Ri~~y~~~  102 (118)
T KOG1589|consen   43 ARPPEKLSYAQNAALTATGLIWTRYSLVITPKNYSLFSVNFFVAITGIYQLTRIANYQQQ  102 (118)
T ss_pred             cCChHHcChhhhHHHHHhhhhheeeeEEEeccchhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            47889999999999999999999999966 334899999999999999999999888543

>PHA02246 hypothetical protein

Probab=94.21  E-value=1.4  Score=31.56  Aligned_cols=64  Identities=9%  Similarity=0.011  Sum_probs=40.8

Q ss_pred             HHHHHHHHHhhHHHHHHHHHhcCCCcccchhHHHHHHHHHHHHHHHhccCCcceEEeehHHHHH
Q 039851           13 NLTTGLVYLSPAKTFWHIVQRRSTEEFESIPYISKLLNAYFWVWYGIVKPNSVLVASVNGFGAA   76 (114)
Q Consensus        13 ~i~ti~~~~spl~~~~~I~k~ks~~~~s~~p~~~~~~n~~lW~~YG~l~~d~~~i~~~N~~g~~   76 (114)
                      ++.++...++.++|+.+-+|+|++|+.|+..++..-..-.+-..==.+++-...|+++......
T Consensus       114 tVat~tIiLaYi~QIIqfyKTK~SEg~n~~l~lii~~GL~~L~~~m~Lthv~~hIiiTEf~N~i  177 (192)
T PHA02246        114 TVATITIILAYVTQITTFYKTKSAEGTNRFLFLIIGLGLASLIVSMVLTHTYVHIIATEFVNFV  177 (192)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcccCCCChhHHHHHHHHHHHHHHHHhhhCCcceeeHHHHHHHH
Confidence            4455556678999999999999999999887765444333222222344443456666555443

>KOG2913 consensus Predicted membrane protein [Function unknown]

Probab=93.81  E-value=0.5  Score=36.10  Aligned_cols=57  Identities=19%  Similarity=0.183  Sum_probs=46.1

Q ss_pred             HHHHHHHHHHHHHHHhhHHHHHHHHHhcCCCcccchhHHHHHHHHHHHHHHHhccCC
Q 039851            7 IFGLLGNLTTGLVYLSPAKTFWHIVQRRSTEEFESIPYISKLLNAYFWVWYGIVKPN   63 (114)
Q Consensus         7 i~g~~~~i~ti~~~~spl~~~~~I~k~ks~~~~s~~p~~~~~~n~~lW~~YG~l~~d   63 (114)
                      .....|.+.+.+--.+-.||+.+..|+||.|++|+++.+.-.+....=+.|-.+.+-
T Consensus         8 ~s~~~g~ls~~~w~v~~iPqi~~n~r~Ks~~glS~lfl~~Wligdi~nl~g~~l~~~   64 (260)
T KOG2913|consen    8 LSTILGILSTVCWCVQLIPQIIENYRRKSTEGLSPLFLLTWLIGDIFNLVGFFLQPL   64 (260)
T ss_pred             HHHHHHHHHHHhhhhhhhhHHHHhhhccccCCCCHHHHHHHHHccHHHHHHHHhccc
Confidence            345566777777777889999999999999999998888777777777777777765

>KOG3211 consensus Predicted endoplasmic reticulum membrane protein Lec35/MPDU1 involved in monosaccharide-P-dolichol utilization [General function prediction only]

Probab=88.07  E-value=2  Score=32.11  Aligned_cols=73  Identities=15%  Similarity=0.065  Sum_probs=58.6

Q ss_pred             HHHhhHHHHHHHHHhcCCCcccchhHHHHHHHHHHHHHHHhccCCcceEEeehHHHHHHHHHHHHHHhhccCC
Q 039851           19 VYLSPAKTFWHIVQRRSTEEFESIPYISKLLNAYFWVWYGIVKPNSVLVASVNGFGAALEIIYVIIFLIFAPP   91 (114)
Q Consensus        19 ~~~spl~~~~~I~k~ks~~~~s~~p~~~~~~n~~lW~~YG~l~~d~~~i~~~N~~g~~l~~~~l~~~~~y~~~   91 (114)
                      ...|-++|+..=.|+|++++.|.......+..|..=..|.....+++.+...-.....++..-..-..+|.++
T Consensus       153 ~v~sr~~Qi~~n~~~~~tgqls~it~fLsf~g~lARiftsiq~t~d~~mll~~v~s~~~Ng~i~aq~l~Y~s~  225 (230)
T KOG3211|consen  153 VVVSRLLQIQCNYHNRSTGQLSLITVFLSFGGCLARIFTSIQETGDFLMLLRFVISLALNGLITAQVLRYWST  225 (230)
T ss_pred             hhHHHHHHHHHHhcccccchhHHHHHHHHhhhHHHHHHHHHHhcCChhhHHHHHHHHHHhHHHHHHHHHHHhc
Confidence            3467789999999999999999998888899999999999988655878777788888777665555555443

>PF10688 Imp-YgjV: Bacterial inner membrane protein; InterPro: IPR019629 This entry represents inner membrane proteins, many are YgjV proteins

Probab=86.37  E-value=3.7  Score=29.00  Aligned_cols=38  Identities=16%  Similarity=0.216  Sum_probs=31.5

Q ss_pred             HHHHHHHHHHHHHHhccCCcceEEeehHHHHHHHHHHHH
Q 039851           45 ISKLLNAYFWVWYGIVKPNSVLVASVNGFGAALEIIYVI   83 (114)
Q Consensus        45 ~~~~~n~~lW~~YG~l~~d~~~i~~~N~~g~~l~~~~l~   83 (114)
                      ...++++.+|+.|+++.++ ++-...|......+.+.+.
T Consensus       118 ~~~l~~~~~w~~~n~~igS-~~g~l~e~~~~~~n~~~i~  155 (163)
T PF10688_consen  118 ILMLVGTLCWLIYNILIGS-WGGTLMEALFIISNLITIY  155 (163)
T ss_pred             HHHHHHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHH
Confidence            4688999999999999998 8888888887777776543

Their function is unknown.

>PF07578 LAB_N: Lipid A Biosynthesis N-terminal domain; InterPro: IPR011499 This domain is found at the N terminus of a group of Chlamydial lipid A biosynthesis proteins

Probab=80.18  E-value=5.7  Score=24.66  Aligned_cols=51  Identities=10%  Similarity=0.263  Sum_probs=31.9

Q ss_pred             HHHHHHHHHhcCCCcccchhH-HHHHHHHHHHHHHHhccCCcceEEeehHHHHHH
Q 039851           24 AKTFWHIVQRRSTEEFESIPY-ISKLLNAYFWVWYGIVKPNSVLVASVNGFGAAL   77 (114)
Q Consensus        24 l~~~~~I~k~ks~~~~s~~p~-~~~~~n~~lW~~YG~l~~d~~~i~~~N~~g~~l   77 (114)
                      +-|-..-.|+|  ++.-|..| ......+.+=+.||+.++| +.++.-.+.|...
T Consensus        14 ~~QW~~SEk~k--~sv~P~~FW~lSl~Gs~lll~Y~i~r~D-pV~ilgq~~gl~i   65 (72)
T PF07578_consen   14 IVQWIYSEKAK--KSVVPVAFWYLSLIGSLLLLIYAIIRKD-PVFILGQSFGLFI   65 (72)
T ss_pred             HHHHHHHHHcC--CCCCcHHHHHHHHHHHHHHHHHHHHHcC-hHHHHHHhcChHH
Confidence            33433333443  33345555 4688999999999999999 6555545555443

It is also found by itself in a family of proteins of unknown function.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00