Citrus Sinensis ID: 039857
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 285 | ||||||
| 449446159 | 538 | PREDICTED: protein O-glucosyltransferase | 0.824 | 0.436 | 0.453 | 5e-64 | |
| 449485616 | 538 | PREDICTED: protein O-glucosyltransferase | 0.824 | 0.436 | 0.45 | 3e-63 | |
| 255539447 | 528 | KDEL motif-containing protein 1 precurso | 0.880 | 0.475 | 0.413 | 6e-61 | |
| 332071136 | 546 | glycosyltransferase [Panax notoginseng] | 0.803 | 0.419 | 0.442 | 6e-60 | |
| 356529208 | 469 | PREDICTED: O-glucosyltransferase rumi ho | 0.821 | 0.498 | 0.454 | 1e-59 | |
| 302143882 | 309 | unnamed protein product [Vitis vinifera] | 0.880 | 0.812 | 0.424 | 2e-59 | |
| 255539445 | 506 | KDEL motif-containing protein 1 precurso | 0.821 | 0.462 | 0.434 | 2e-59 | |
| 225470185 | 525 | PREDICTED: O-glucosyltransferase rumi ho | 0.810 | 0.44 | 0.435 | 2e-59 | |
| 359490428 | 288 | PREDICTED: O-glucosyltransferase rumi-li | 0.729 | 0.722 | 0.475 | 2e-59 | |
| 147810897 | 378 | hypothetical protein VITISV_037876 [Viti | 0.870 | 0.656 | 0.404 | 3e-59 |
| >gi|449446159|ref|XP_004140839.1| PREDICTED: protein O-glucosyltransferase 1-like [Cucumis sativus] | Back alignment and taxonomy information |
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Score = 250 bits (639), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 127/280 (45%), Positives = 178/280 (63%), Gaps = 45/280 (16%)
Query: 50 YFRWIHKDLRPW------VHTGITREMIERGREPGYFRLGNHEVSWHRKELMKCNVSEGQ 103
++ W +++PW + G + + + REP + GN EV+ RK+L+KCNVS+ Q
Sbjct: 259 FWGWPEINIKPWEPLLKDIKEG-NKRIPWKSREPYAYWKGNPEVADTRKDLIKCNVSDQQ 317
Query: 104 DWSARLYSQNWNIEQRKA--SSNLT---------------WPANVK-------------- 132
DW+AR+++Q+W E ++ S+L+ W + K
Sbjct: 318 DWNARVFAQDWTKESQEGYKQSDLSNQCLHRYKIYIEGSAWSVSEKYILACDSVTLIVKP 377
Query: 133 -------TGLIPMHHYWPIMENDKCRSIKFAVDWGNNHTETAQGLGKAASKFVQEELKLD 185
GL+P+HHYWP+ ++DKC+SIKFAVDWGN+H + AQ +GKAAS F+QEELK+D
Sbjct: 378 HYYDFFTRGLMPVHHYWPVKDDDKCKSIKFAVDWGNSHKQKAQAIGKAASSFIQEELKMD 437
Query: 186 NVYDYMFHLLNHYSKLLRYQPTIPPKADEYCAETLGCPEEGLARKFMEESFVKSPKETSP 245
VYDYMFHLL+ YSKLL ++PT+PP A E C+E + CP EGL +KFM ES VK P E++P
Sbjct: 438 YVYDYMFHLLSEYSKLLTFKPTLPPNAIELCSEAMACPAEGLTKKFMTESLVKRPAESNP 497
Query: 246 CTLPPPYDPISLHDVLWGEKKSVLQVESWTRAYWETQTKQ 285
CT+PPPYDP SLH VL ++ S+ QVE W ++W TQ+KQ
Sbjct: 498 CTMPPPYDPASLHFVLSRKENSIKQVEKWETSFWNTQSKQ 537
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449485616|ref|XP_004157225.1| PREDICTED: protein O-glucosyltransferase 1-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|255539447|ref|XP_002510788.1| KDEL motif-containing protein 1 precursor, putative [Ricinus communis] gi|223549903|gb|EEF51390.1| KDEL motif-containing protein 1 precursor, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|332071136|gb|AED99886.1| glycosyltransferase [Panax notoginseng] | Back alignment and taxonomy information |
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| >gi|356529208|ref|XP_003533188.1| PREDICTED: O-glucosyltransferase rumi homolog [Glycine max] | Back alignment and taxonomy information |
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| >gi|302143882|emb|CBI22743.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|255539445|ref|XP_002510787.1| KDEL motif-containing protein 1 precursor, putative [Ricinus communis] gi|223549902|gb|EEF51389.1| KDEL motif-containing protein 1 precursor, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|225470185|ref|XP_002268245.1| PREDICTED: O-glucosyltransferase rumi homolog [Vitis vinifera] gi|302143884|emb|CBI22745.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|359490428|ref|XP_003634087.1| PREDICTED: O-glucosyltransferase rumi-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|147810897|emb|CAN69493.1| hypothetical protein VITISV_037876 [Vitis vinifera] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 285 | ||||||
| TAIR|locus:2101358 | 539 | AT3G48980 "AT3G48980" [Arabido | 0.529 | 0.280 | 0.582 | 4.7e-68 | |
| TAIR|locus:2172818 | 542 | AT5G23850 "AT5G23850" [Arabido | 0.529 | 0.278 | 0.536 | 6e-68 | |
| TAIR|locus:2031274 | 578 | AT1G63420 "AT1G63420" [Arabido | 0.512 | 0.252 | 0.516 | 1.1e-56 | |
| TAIR|locus:2098936 | 498 | AT3G61270 "AT3G61270" [Arabido | 0.526 | 0.301 | 0.461 | 2.9e-52 | |
| TAIR|locus:2098956 | 455 | AT3G61290 "AT3G61290" [Arabido | 0.526 | 0.329 | 0.434 | 6.6e-52 | |
| TAIR|locus:2050674 | 523 | DTA2 "AT2G45830" [Arabidopsis | 0.505 | 0.275 | 0.479 | 7.7e-52 | |
| TAIR|locus:2050664 | 523 | AT2G45840 "AT2G45840" [Arabido | 0.522 | 0.284 | 0.447 | 3.7e-50 | |
| TAIR|locus:2098946 | 536 | AT3G61280 "AT3G61280" [Arabido | 0.508 | 0.270 | 0.414 | 8.3e-49 | |
| TAIR|locus:2007362 | 507 | AT1G07220 "AT1G07220" [Arabido | 0.4 | 0.224 | 0.456 | 3.2e-35 |
| TAIR|locus:2101358 AT3G48980 "AT3G48980" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 512 (185.3 bits), Expect = 4.7e-68, Sum P(2) = 4.7e-68
Identities = 88/151 (58%), Positives = 107/151 (70%)
Query: 134 GLIPMHHYWPIMENDKCRSIKFAVDWGNNHTETAQGLGKAASKFVQEELKLDNVYDYMFH 193
G+ P HHYWP+ E+DKCRSIKFAVDWGN H AQ +GK AS+FVQ+ELK+D VYDYMFH
Sbjct: 386 GMFPGHHYWPVKEDDKCRSIKFAVDWGNLHMRKAQDIGKKASEFVQQELKMDYVYDYMFH 445
Query: 194 LLNHYSKLLRYQPTIPPKADEYCAETLGCPEEGLARKFMEESFVKSPKETSPCTLPPPYD 253
LL YSKLLR++P IP + E C+E + CP +G RKFM ES VK P ET PC +PPPYD
Sbjct: 446 LLIQYSKLLRFKPEIPQNSTELCSEAMACPRDGNERKFMMESLVKRPAETGPCAMPPPYD 505
Query: 254 PISLHDVLWGEKKSVLQVESWTRAYWETQTK 284
P S + VL + + ++E W YW Q K
Sbjct: 506 PASFYSVLKRRQSTTSRIEQWESKYWRKQNK 536
|
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| TAIR|locus:2172818 AT5G23850 "AT5G23850" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2031274 AT1G63420 "AT1G63420" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2098936 AT3G61270 "AT3G61270" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2098956 AT3G61290 "AT3G61290" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2050674 DTA2 "AT2G45830" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2050664 AT2G45840 "AT2G45840" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2098946 AT3G61280 "AT3G61280" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2007362 AT1G07220 "AT1G07220" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| GSVIVG00010512001 | SubName- Full=Chromosome undetermined scaffold_265, whole genome shotgun sequence; (378 aa) | |||||||
(Vitis vinifera) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 285 | |||
| pfam05686 | 281 | pfam05686, Glyco_transf_90, Glycosyl transferase f | 9e-43 | |
| smart00672 | 256 | smart00672, CAP10, Putative lipopolysaccharide-mod | 8e-33 | |
| pfam05686 | 281 | pfam05686, Glyco_transf_90, Glycosyl transferase f | 1e-13 |
| >gnl|CDD|218692 pfam05686, Glyco_transf_90, Glycosyl transferase family 90 | Back alignment and domain information |
|---|
Score = 147 bits (372), Expect = 9e-43
Identities = 60/116 (51%), Positives = 78/116 (67%)
Query: 160 GNNHTETAQGLGKAASKFVQEELKLDNVYDYMFHLLNHYSKLLRYQPTIPPKADEYCAET 219
GN AQ + + S+F++E LK+D+VYDYMFHLL Y+KLL+Y+PT+P A E C E+
Sbjct: 166 GNPSVAEAQKIAERGSEFIRENLKMDDVYDYMFHLLTEYAKLLKYKPTVPKGAVEVCPES 225
Query: 220 LGCPEEGLARKFMEESFVKSPKETSPCTLPPPYDPISLHDVLWGEKKSVLQVESWT 275
+ CP EGL RKFM ES VKSP + PC LPPP+DP L + L + + QVE W
Sbjct: 226 MACPAEGLERKFMMESLVKSPSDDGPCELPPPFDPDELEEFLERKANVIRQVEKWE 281
|
This family of glycosyl transferases are specifically (mannosyl) glucuronoxylomannan/galactoxylomannan -beta 1,2-xylosyltransferases, EC:2.4.2.-. Length = 281 |
| >gnl|CDD|214773 smart00672, CAP10, Putative lipopolysaccharide-modifying enzyme | Back alignment and domain information |
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| >gnl|CDD|218692 pfam05686, Glyco_transf_90, Glycosyl transferase family 90 | Back alignment and domain information |
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Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 285 | |||
| KOG2458 | 528 | consensus Endoplasmic reticulum protein EP58, cont | 100.0 | |
| PF05686 | 395 | Glyco_transf_90: Glycosyl transferase family 90; I | 100.0 | |
| smart00672 | 256 | CAP10 Putative lipopolysaccharide-modifying enzyme | 99.97 | |
| PF13524 | 92 | Glyco_trans_1_2: Glycosyl transferases group 1 | 96.38 | |
| PRK10307 | 412 | putative glycosyl transferase; Provisional | 82.23 |
| >KOG2458 consensus Endoplasmic reticulum protein EP58, contains filamin rod domain and KDEL motif [General function prediction only] | Back alignment and domain information |
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Probab=100.00 E-value=1.3e-96 Score=718.82 Aligned_cols=269 Identities=50% Similarity=0.951 Sum_probs=253.7
Q ss_pred ccccccC---CCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCcchhhhcccccccccCCCHHHHhcccCCCcccc--
Q 039857 10 EYPLNCS---GGIRTNTNPGTYPTSYT--TKDEDHNGPAPSTCPDYFRWIHKDLRPWVHTGITREMIERGREPGYFRL-- 82 (285)
Q Consensus 10 ~~pl~C~---~~~~~~tcp~~~~~~~~--~~~~~~~~~~~~~CP~yf~wi~~dl~PW~~~Gitr~~~e~a~~~a~fr~-- 82 (285)
.+.|.|+ +.+.+.+||++.....+ -.++.. .+..+|||||||||+||+||++|||||+|+|+|+++|+||+
T Consensus 93 ~~~l~cs~~s~~~~~~~~p~~~~~~s~~~~~~~~~--~~~~tCPDyfrWIheDL~Pw~etgItre~~erak~~a~fr~vI 170 (528)
T KOG2458|consen 93 RYRLYCSLFSGLKREVLCPSSHVSKSPYILKNPVY--HESCTCPDYFRWIHEDLCPWRETGITREMAERAKRKAHFRLVI 170 (528)
T ss_pred hhhhhhhhhhcccccccccccccccCccccCCCCC--CCCCCCCcHHHHHHHhcCccccccchHHHhhhhhcccceeeee
Confidence 5568998 23679999998655533 123333 67889999999999999999999999999999999999997
Q ss_pred --------------------------------------------------------------------------------
Q 039857 83 -------------------------------------------------------------------------------- 82 (285)
Q Consensus 83 -------------------------------------------------------------------------------- 82 (285)
T Consensus 171 ~~g~~yv~~Y~ks~qtrd~ft~wgilqLlr~ypgklPDlElmf~~~D~P~v~~~~~~~~~~ppPlF~yCg~~~s~DIVfP 250 (528)
T KOG2458|consen 171 KEGRLYVENYRKSIQTRDVFTIWGILQLLRTYPGKLPDLELMFNCGDWPLVRKKDFQGTPPPPPLFSYCGSSESLDIVFP 250 (528)
T ss_pred ecCceehhhhhhhhcccchHHHHHHHHHHHhcCCCCCCceeeeecCCccccchhhccCCCCCCCeEeecCCccccccccc
Confidence
Q ss_pred -----------------------------------------ccchhh-hchhhhhhccCCCCCCcchhhhhhchHHHHhc
Q 039857 83 -----------------------------------------GNHEVS-WHRKELMKCNVSEGQDWSARLYSQNWNIEQRK 120 (285)
Q Consensus 83 -----------------------------------------GNp~v~-~~R~~L~~Cn~s~~~dw~ar~~~qdW~~e~~~ 120 (285)
|||.|+ ++|.+||+||.|+.+|||||+|.|||.+|++.
T Consensus 251 dwsfwgw~e~nik~w~~~~~~~~egn~~~~W~~r~~yAywrGnp~v~e~~rl~ll~cn~s~~~d~~~~~y~qdw~~E~~~ 330 (528)
T KOG2458|consen 251 DWSFWGWAEVNIKPWEKLLEDIVEGNKRPKWKNKNPYAYWRGNPSVAERLRLDLLSCNNSELVDANATLYFQDWSKESKL 330 (528)
T ss_pred CccccCChhhcccccchHHHHHHhhccCCCcccCCceeEecCCCCccccchhhhhhcCCchhhchhhhhHHHhhhhhhhc
Confidence 999997 99999999999999999999999999999999
Q ss_pred C--CCcc---------------cccee---------------------ccCCCCCcceeeeccCCCCcccHHHHHHHhhh
Q 039857 121 A--SSNL---------------TWPAN---------------------VKTGLIPMHHYWPIMENDKCRSIKFAVDWGNN 162 (285)
Q Consensus 121 g--~S~L---------------aWSvS---------------------vyr~L~P~vHYwPIk~d~~c~dIk~aV~Wgn~ 162 (285)
| +|+| ||||| +||+|.||+|||||+++ |+||+|||+|||+
T Consensus 331 G~k~s~l~dqc~hrYkIyiEG~awsvs~kYilacDS~tL~v~p~YydfF~r~l~P~~HYwPIk~~--c~slkfaV~Wgn~ 408 (528)
T KOG2458|consen 331 GFKQSNLFDQCKHRYKIYIEGTAWSVSEKYILACDSMTLKVKPEYYDFFYRGLQPWKHYWPIKSN--CRSLKFAVDWGNN 408 (528)
T ss_pred cccccchhhhcceeeEEEEeeeeeeeecceeeecceeEEeecchHHHHHhhcccchhcccccccc--hhHHHHHHHhccc
Confidence 9 9999 99999 19999999999999998 9999999999999
Q ss_pred cHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhhcccCCCcCCCccccccccccCCcchHHHhHHhhhhccCCCC
Q 039857 163 HTETAQGLGKAASKFVQEELKLDNVYDYMFHLLNHYSKLLRYQPTIPPKADEYCAETLGCPEEGLARKFMEESFVKSPKE 242 (285)
Q Consensus 163 hd~eAq~Ia~~G~~Fi~e~L~md~VycYm~hLL~EYAKLlkykP~vp~~a~Evc~esm~C~~~g~~r~fm~eS~v~~p~~ 242 (285)
|+++||+||++||+||+++|+|++|||||||||+||||||+|||+||+||+|||+|+|+|+++|++|+||++|||+ ||+
T Consensus 409 h~~~Aq~Igk~gs~f~r~~L~m~~vYdYmfhllqeYakL~k~kpevp~~a~evc~~~m~cp~~g~~r~~m~~slv~-ps~ 487 (528)
T KOG2458|consen 409 HDEEAQKIGKEGSEFARKNLKMDYVYDYMFHLLQEYAKLQKFKPEVPEGATEVCPETMACPEDGRERKFMDESLVM-PSD 487 (528)
T ss_pred ChHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHhhcCCcCCCCccccCchhccCCccchhhhhhhhcccc-ccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999998 999
Q ss_pred CCCCCCCCCCChhHHHHHHHhhhhHHHHHHHHHHHHHHhhh
Q 039857 243 TSPCTLPPPYDPISLHDVLWGEKKSVLQVESWTRAYWETQT 283 (285)
Q Consensus 243 ~~PC~~ppp~~~~~l~~~~~rk~~~~~qVe~we~~~w~~~~ 283 (285)
++||.|||||++.+|++|++||+++++|||+||++||++|+
T Consensus 488 ~~pC~~p~p~~~~~l~~~~~~k~~~~~~ve~we~~y~~~~~ 528 (528)
T KOG2458|consen 488 TAPCEMPPPYDPNELKEFLEKKESTTRQVEKWENKYWQKQN 528 (528)
T ss_pred cCcccCCCCCCcHHHHHHHHHHHhHHHHHHHHHHHHHhccC
Confidence 99999999999999999999999999999999999999875
|
|
| >PF05686 Glyco_transf_90: Glycosyl transferase family 90; InterPro: IPR006598 Cryptococcus neoformans is a pathogenic fungus which most commonly affects the central nervous system and causes fatal meningoencephalitis primarily in patients with AIDS | Back alignment and domain information |
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| >smart00672 CAP10 Putative lipopolysaccharide-modifying enzyme | Back alignment and domain information |
|---|
| >PF13524 Glyco_trans_1_2: Glycosyl transferases group 1 | Back alignment and domain information |
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| >PRK10307 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 285 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-05 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 45.6 bits (107), Expect = 1e-05
Identities = 23/120 (19%), Positives = 40/120 (33%), Gaps = 26/120 (21%)
Query: 117 EQRKASSNLT-WPANVKTGLIPMH---HYWPIMENDKCRSI------KFAVD-WGNNHTE 165
E RK L+ +P + IP W + + V+ T
Sbjct: 370 EYRKMFDRLSVFPPSAH---IPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTI 426
Query: 166 TAQGLGKAASKFVQEELKLDNVYDYMFH--LLNHYSKLLRYQPT--IPPKADEYCAETLG 221
+ + ELK+ +Y H +++HY+ + IPP D+Y +G
Sbjct: 427 SIPSI--------YLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIG 478
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00