Citrus Sinensis ID: 039905

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------17
Protein Sequence
QFIHQINQTDLETAVAETRAKSYHEFVVLLKMIIASSNPLQSTAVTFLMPNDEKLSEVVATPEHLHDFILSHSIPTVLLNNNLLHFPNGTLVPSSQPGRMLSMTNSGKLGTYVNNARLVNFNVWMNSQLKSHGISSSITCNSPISSSQSMASLNRHGRVYQLEILYYL
Secondary Structure (PSIPRED)
ccccccccccHHHHHHHHHHccHHHHHHHHHHHHccccccccccEEEEEEccccccccccccHHHHHHHHHccccccccHHHHcccccccEEcccccccEEEEEEcccccEEEccEEEccccccccccEEEEccccccccccccccccccccccccccEEEEEEEEEc
Secondary Structure Prediction (SSPRO)
ccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEccccHHHHHccccHHHHHHHHHHccccccccHHHHHccccccEEcccccccEEEEEcccccEEEEEcEEEEccccccccEEEEEccccEEccccccccccccHHHcccccEEEEEEEEEc
Coil and Loop (DISEMBL)
QFIHQINQTDLETAVAETRAKSYHEFVVLLKMIIAssnplqstavtflmpndeklsevvatpehlHDFIlshsiptvllnnnllhfpngtlvpssqpgrmlsmtnsgklgtyvNNARLVNFNVWMNsqlkshgisssitcnspisssqSMASLNRHGRVYQLEILYYL
Flexible Loop (DISEMBL)
qfihqinqtdletavAETRAKSYHEFVVLLKMIIASSNPLQSTAVTFLMPNDEKLSEVVATPEHLHDFILSHSIPTVLLNNNLLHFPNGTLVPSSQPGRMLSMTNSGKLGTYVNNARLVNFNVWMNSQLKSHGISSSITCNSPISSSQSmaslnrhgrvyqleILYYL
Low Complexity Region (SEG)
QFIHQINQTDLETAVAETRAKSYHEFVVLLKMIIASSNPLQSTAVTFLMPNDEKLSEVVATPEHLHDFILSHSIPTVLLNNNLLHFPNGTLVPSSQPGRMLSMTNSGKLGTYVNNARLVNFNVWMNSQLKSHGisssitcnspisssqsMASLNRHGRVYQLEILYYL
Disordered region (IsUnstruct)
***********ETAVAETRAKSYHEFVVLLKMIIASSNPLQSTAVTFLMPNDEKLSEVVATPEHLHDFILSHSIPTVLLNNNLLHFPNGTLV**************GKLGTYVNNARLVNFNVWMNSQLK*************************HGRVYQLEILYY*
Disordered Region (DISOPRED)
******NQTDLETAVAETRAKSYHEFVVLLKMIIASSNPLQSTAVTFLMPNDEKLSEVVATPEHLHDFILSHSIPTVLLNNNLLHFPNGTLVPSSQPGRMLSMTNSGKLGTYVNNARLVNFNVWMNSQLKSHGISSSIT*******************VYQLEILYYL
Disordered Region (DISEMBL)
QFIHQINQTDLETAVAETRAKSYHEFVVLLKMIIASSNPLQSTAVTFLMPNDEKLSEVVATPEHLHDFILSHSIPTVLLNNNLLHFPNGTLVPSSQPGRMLSMTNSGKLGTYVNNARLVNFNVWMNSQLKSHGISSSITCNSPISSSQSMASLNRHGRVYQLEILYYL
Disordered Region (DISPRO)
****QINQTDLETAVAETRAKSYHEFVVLLKMIIASSNPLQSTAVTFLMPNDEKLSEVVATPEHLHDFILSHSIPTVLLNNNLLHFPNGTLVPSSQPGRMLSMTNSGKLGTYVNNARLVNFNVWMNSQLKSHGISSSITCNSPISSSQSMASLNRHGRVYQLEILYYL
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
QFIHQINQTDLETAVAETRAKSYHEFVVLLKMIIASSNPLQSTAVTFLMPNDEKLSEVVATPEHLHDFILSHSIPTVLLNNNLLHFPNGTLVPSSQPGRMLSMTNSGKLGTYVNNARLVNFNVWMNSQLKSHGISSSITCNSPISSSQSMASLNRHGRVYQLEILYYL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	168
255581796	204	conserved hypothetical protein [Ricinus	0.791	0.651	0.556	8e-36
357495337	193	hypothetical protein MTR_5g097370 [Medic	0.797	0.694	0.544	1e-35
449463404	197	PREDICTED: uncharacterized protein LOC10	0.791	0.675	0.526	2e-35
449453742	192	PREDICTED: uncharacterized protein LOC10	0.791	0.692	0.511	2e-31
297808677	285	hypothetical protein ARALYDRAFT_351658 [	0.886	0.522	0.46	1e-29
30690274	268	Fasciclin-like arabinogalactan family pr	0.880	0.552	0.469	1e-29
357447999	146	hypothetical protein MTR_2g026520 [Medic	0.720	0.828	0.397	3e-21
255558003	245	conserved hypothetical protein [Ricinus	0.714	0.489	0.379	6e-16
297807719	249	hypothetical protein ARALYDRAFT_488555 [	0.773	0.522	0.368	4e-15
21553720	256	unknown [Arabidopsis thaliana]	0.773	0.507	0.368	1e-14

>gi|255581796|ref|XP_002531699.1| conserved hypothetical protein [Ricinus communis] gi|223528675|gb|EEF30690.1| conserved hypothetical protein [Ricinus communis]

 Score =  155 bits (391), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 74/133 (55%), Positives = 100/133 (75%)

Query: 6   INQTDLETAVAETRAKSYHEFVVLLKMIIASSNPLQSTAVTFLMPNDEKLSEVVATPEHL 65
           INQTDL+ A+ + R  +YH FV+LLK++  S N L+   +TFLMP+DE+LS+V    E L
Sbjct: 29  INQTDLQVAMDDMRTSAYHGFVILLKILNGSPNSLRDGEITFLMPSDEELSKVALRLESL 88

Query: 66  HDFILSHSIPTVLLNNNLLHFPNGTLVPSSQPGRMLSMTNSGKLGTYVNNARLVNFNVWM 125
            DFIL HSIPT LL ++LLHFPNGTLVP+  P RML +TN G+ G +VNNAR+V+ NV +
Sbjct: 89  QDFILGHSIPTALLISHLLHFPNGTLVPTGVPNRMLRVTNGGRTGLFVNNARVVSPNVCL 148

Query: 126 NSQLKSHGISSSI 138
           NS ++ HGIS+++
Sbjct: 149 NSLIRCHGISAAM 161

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357495337|ref|XP_003617957.1| hypothetical protein MTR_5g097370 [Medicago truncatula] gi|355519292|gb|AET00916.1| hypothetical protein MTR_5g097370 [Medicago truncatula]

 Score =  154 bits (389), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 73/134 (54%), Positives = 104/134 (77%)

Query: 6   INQTDLETAVAETRAKSYHEFVVLLKMIIASSNPLQSTAVTFLMPNDEKLSEVVATPEHL 65
            NQTDL+TA+++ +++SY+ FV+LLK++ +  N +Q+  +TFLMPNDE LS     PE L
Sbjct: 24  FNQTDLQTAMSDMQSRSYYGFVILLKILNSLPNQMQNNDLTFLMPNDEDLSHFSIAPEEL 83

Query: 66  HDFILSHSIPTVLLNNNLLHFPNGTLVPSSQPGRMLSMTNSGKLGTYVNNARLVNFNVWM 125
           HDF+LSHSIPT LL N+LLHFPNG++VPS  P +++S+TN+ + G +VNNAR+V  NV  
Sbjct: 84  HDFLLSHSIPTPLLLNHLLHFPNGSIVPSGLPSKVISITNNARAGLFVNNARIVTPNVCQ 143

Query: 126 NSQLKSHGISSSIT 139
           NS +K HGIS+++T
Sbjct: 144 NSLIKCHGISAALT 157

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449463404|ref|XP_004149424.1| PREDICTED: uncharacterized protein LOC101220860 [Cucumis sativus] gi|449496897|ref|XP_004160256.1| PREDICTED: uncharacterized LOC101220860 [Cucumis sativus]

 Score =  154 bits (388), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 70/133 (52%), Positives = 100/133 (75%)

Query: 7   NQTDLETAVAETRAKSYHEFVVLLKMIIASSNPLQSTAVTFLMPNDEKLSEVVATPEHLH 66
           NQ DL+ A+ E R KSYH F +LLK++ +++  LQ++ +TF MP D++LS+   +P+ L 
Sbjct: 21  NQIDLQAAMDEMRLKSYHGFAILLKILNSTTKTLQNSNITFFMPTDQELSQADISPDRLE 80

Query: 67  DFILSHSIPTVLLNNNLLHFPNGTLVPSSQPGRMLSMTNSGKLGTYVNNARLVNFNVWMN 126
           +F+LSHSIPT LL NNLLHFPNGTLVPSS P RM+ +TN  K+G  +NNAR++  NV + 
Sbjct: 81  EFVLSHSIPTALLLNNLLHFPNGTLVPSSIPNRMIRITNCRKMGVCLNNARIITPNVCLT 140

Query: 127 SQLKSHGISSSIT 139
           S ++ HGIS++I+
Sbjct: 141 SSIRCHGISTAIS 153

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449453742|ref|XP_004144615.1| PREDICTED: uncharacterized protein LOC101210447 [Cucumis sativus] gi|449511819|ref|XP_004164062.1| PREDICTED: uncharacterized protein LOC101229762 [Cucumis sativus]

 Score =  140 bits (354), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 68/133 (51%), Positives = 96/133 (72%)

Query: 7   NQTDLETAVAETRAKSYHEFVVLLKMIIASSNPLQSTAVTFLMPNDEKLSEVVATPEHLH 66
           NQTDL+ A+ E R KSYH FV+LLK++  S+  LQ++ +TF MP D++LS+   + + L 
Sbjct: 16  NQTDLQAAMDEMRLKSYHGFVILLKILNNSNKTLQNSDITFFMPTDQELSQADISLDQLE 75

Query: 67  DFILSHSIPTVLLNNNLLHFPNGTLVPSSQPGRMLSMTNSGKLGTYVNNARLVNFNVWMN 126
           +F+L HSIPT LL NNL HFPNG+LVPSS P RM+ +T S  +G  VN+A +V  NV + 
Sbjct: 76  EFVLRHSIPTTLLLNNLSHFPNGSLVPSSIPNRMIKITKSRMMGVCVNDALIVTPNVCLT 135

Query: 127 SQLKSHGISSSIT 139
           S ++ HGIS++I+
Sbjct: 136 SSIRCHGISTAIS 148

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297808677|ref|XP_002872222.1| hypothetical protein ARALYDRAFT_351658 [Arabidopsis lyrata subsp. lyrata] gi|297318059|gb|EFH48481.1| hypothetical protein ARALYDRAFT_351658 [Arabidopsis lyrata subsp. lyrata]

 Score =  134 bits (337), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 69/150 (46%), Positives = 100/150 (66%), Gaps = 1/150 (0%)

Query: 7   NQTDLETAVAETRAKSYHEFVVLLKMIIASSNPLQSTAVTFLMPNDEKLSEVVATPEHLH 66
           NQTDL +A+ + R +SY+ FV+LL+  +  +N  ++T +TFLMP+D  +S    TPE+L 
Sbjct: 131 NQTDLISAMTDMRRQSYNGFVILLR-FLNDTNYFRNTDITFLMPSDNDISHADITPENLE 189

Query: 67  DFILSHSIPTVLLNNNLLHFPNGTLVPSSQPGRMLSMTNSGKLGTYVNNARLVNFNVWMN 126
            FIL H+IP  L+ N++LHFPN TLVP S   +M ++T SG  G YVNNAR+V  NV  N
Sbjct: 190 TFILKHTIPAWLMINHMLHFPNRTLVPCSLSDKMFTITKSGGSGIYVNNARIVTPNVCQN 249

Query: 127 SQLKSHGISSSITCNSPISSSQSMASLNRH 156
           S++  HGIS  I  N    S++ ++S+ R+
Sbjct: 250 SRISCHGISDVIAFNQNYMSTKMLSSVRRN 279

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30690274|ref|NP_850872.1| Fasciclin-like arabinogalactan family protein [Arabidopsis thaliana] gi|332006188|gb|AED93571.1| Fasciclin-like arabinogalactan family protein [Arabidopsis thaliana]

 Score =  134 bits (337), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 70/149 (46%), Positives = 98/149 (65%), Gaps = 1/149 (0%)

Query: 7   NQTDLETAVAETRAKSYHEFVVLLKMIIASSNPLQSTAVTFLMPNDEKLSEVVATPEHLH 66
           NQTDL +A+ + R +SY+ FV+LL+  +  +N  ++T +TFLMP+D  +S    TPE L 
Sbjct: 114 NQTDLISAMTDMRRQSYNGFVILLR-FLNDTNYFRNTDITFLMPSDNDISHADITPESLE 172

Query: 67  DFILSHSIPTVLLNNNLLHFPNGTLVPSSQPGRMLSMTNSGKLGTYVNNARLVNFNVWMN 126
            FIL H+IP  L+ N++LHFPN TLVP S   RM ++T SG  G YVNNAR+V  NV  N
Sbjct: 173 TFILKHTIPAWLMINHMLHFPNRTLVPCSFSDRMFTITKSGGSGIYVNNARIVTPNVCQN 232

Query: 127 SQLKSHGISSSITCNSPISSSQSMASLNR 155
           S++  HGIS  I+ N    S++ + S+ R
Sbjct: 233 SRISCHGISDVISFNQNYVSTKMLPSVRR 261

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357447999|ref|XP_003594275.1| hypothetical protein MTR_2g026520 [Medicago truncatula] gi|355483323|gb|AES64526.1| hypothetical protein MTR_2g026520 [Medicago truncatula]

 Score =  106 bits (265), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 54/136 (39%), Positives = 83/136 (61%), Gaps = 15/136 (11%)

Query: 3   IHQINQTDLETAVAETRAKSYHEFVVLLKMIIASSNPLQSTAVTFLMPNDEKLSEVVATP 62
           IH  N TDL+ A+ + RAK ++ F +LL+M+  +S P++   +TF MP D +LS    + 
Sbjct: 23  IHPFNHTDLQAAIGDMRAKIFYGFAMLLQMLNGTSQPIRE--LTFFMPGDRELSASAISA 80

Query: 63  EHLHDFILSHSIPTVLLNNNLLHFPNGTLVPSSQPGRMLSMTNSGKLGTYVNNARLVNFN 122
             + DFILSH+IP  L+ N+L HFP GTLVPS              +  +VNNA++V+ N
Sbjct: 81  NGIEDFILSHAIPMPLVFNDLSHFPTGTLVPSG-------------MKFFVNNAQIVSAN 127

Query: 123 VWMNSQLKSHGISSSI 138
           + ++S +K HG+ + I
Sbjct: 128 ICLSSIIKCHGVDALI 143

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255558003|ref|XP_002520030.1| conserved hypothetical protein [Ricinus communis] gi|223540794|gb|EEF42354.1| conserved hypothetical protein [Ricinus communis]

 Score = 89.0 bits (219), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 49/129 (37%), Positives = 76/129 (58%), Gaps = 9/129 (6%)

Query: 10  DLETAVAETRAKSYHEFVVLLKMIIASSNPLQ---STAVTFLMPNDEKLSEVVATPEHLH 66
           +L+ A+ E    +Y  FV L+ M     +PL       +TFLMPND  LS+     + L 
Sbjct: 31  ELDVAIDEMTTANYFTFVTLINM-----SPLDHRIQGNITFLMPNDRILSKSRIPQKSLA 85

Query: 67  DFILSHSIPTVLLNNNLLHFPNGTLVPSSQPGRMLSMTNSGKLGTYVNNARLVNFNVW-M 125
           DF+L HSIP+ LL ++L H P+G+ +PSS P  ML +TN G+   ++N+ R+++ N+   
Sbjct: 86  DFLLHHSIPSPLLFDHLQHIPSGSTIPSSDPDYMLDITNKGRRNFFLNDVRIISPNICTA 145

Query: 126 NSQLKSHGI 134
            S ++ HGI
Sbjct: 146 GSSIRCHGI 154

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297807719|ref|XP_002871743.1| hypothetical protein ARALYDRAFT_488555 [Arabidopsis lyrata subsp. lyrata] gi|297317580|gb|EFH48002.1| hypothetical protein ARALYDRAFT_488555 [Arabidopsis lyrata subsp. lyrata]

 Score = 86.3 bits (212), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 49/133 (36%), Positives = 77/133 (57%), Gaps = 3/133 (2%)

Query: 4   HQINQTDLETAVAETRAKSYHEFVVLLKMIIASSNPLQSTAVTFLMPNDEKLSE--VVAT 61
           H  N  +L  A+ E    +Y  FV+L+ M+  S NP     VTFLMP D+ LS   ++  
Sbjct: 29  HVPNNHELSVAIEEMEKANYFSFVMLINML-PSVNPRFLANVTFLMPKDKTLSRSNIINQ 87

Query: 62  PEHLHDFILSHSIPTVLLNNNLLHFPNGTLVPSSQPGRMLSMTNSGKLGTYVNNARLVNF 121
            + + +F+L HSIP+ LL  +L   PNG++VPSS P   L ++N G+   ++NN ++++ 
Sbjct: 88  QDSVSEFLLRHSIPSSLLFEHLNLIPNGSIVPSSLPHYTLEISNGGRSNYFLNNVKIISR 147

Query: 122 NVWMNSQLKSHGI 134
           N+     +K HGI
Sbjct: 148 NICSLGSIKCHGI 160

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21553720|gb|AAM62813.1| unknown [Arabidopsis thaliana]

 Score = 84.7 bits (208), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 49/133 (36%), Positives = 77/133 (57%), Gaps = 3/133 (2%)

Query: 4   HQINQTDLETAVAETRAKSYHEFVVLLKMIIASSNPLQSTAVTFLMPNDEKLS--EVVAT 61
           H  N  +L  A+ E    +Y  FV+L+ M+  S NP     VTFLMP D+ LS   ++  
Sbjct: 29  HVPNNHELSIAIEEMEKANYFSFVMLINML-PSVNPRFLANVTFLMPKDKTLSTSNIINQ 87

Query: 62  PEHLHDFILSHSIPTVLLNNNLLHFPNGTLVPSSQPGRMLSMTNSGKLGTYVNNARLVNF 121
            + + +F+L HSIP+ LL  +L   PNG++VPSS P   L ++N G+   ++NN ++++ 
Sbjct: 88  QDSVTEFLLRHSIPSSLLFEHLNLIPNGSIVPSSLPHYTLEISNGGRSNYFLNNVKIISR 147

Query: 122 NVWMNSQLKSHGI 134
           N+     +K HGI
Sbjct: 148 NICSLGSIKCHGI 160

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	168
TAIR|locus:2146789	268	AT5G26730 "AT5G26730" [Arabido	0.75	0.470	0.496	8.2e-28
TAIR|locus:2148191	256	AT5G16920 "AT5G16920" [Arabido	0.767	0.503	0.363	1.7e-18

TAIR|locus:2146789 AT5G26730 "AT5G26730" [Arabidopsis thaliana (taxid:3702)]

 Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
 Identities = 63/127 (49%), Positives = 86/127 (67%)

Query:     7 NQTDLETAVAETRAKSYHEFVVLLKMIIASSNPLQSTAVTFLMPNDEKLSEVVATPEHLH 66
             NQTDL +A+ + R +SY+ FV+LL+ +   +N  ++T +TFLMP+D  +S    TPE L 
Sbjct:   114 NQTDLISAMTDMRRQSYNGFVILLRFL-NDTNYFRNTDITFLMPSDNDISHADITPESLE 172

Query:    67 DFILSHSIPTVLLNNNLLHFPNGTLVPSSQPGRMLSMTNSGKLGTYVNNARLVNFNVWMN 126
              FIL H+IP  L+ N++LHFPN TLVP S   RM ++T SG  G YVNNAR+V  NV  N
Sbjct:   173 TFILKHTIPAWLMINHMLHFPNRTLVPCSFSDRMFTITKSGGSGIYVNNARIVTPNVCQN 232

Query:   127 SQLKSHG 133
             S++  HG
Sbjct:   233 SRISCHG 239

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2148191 AT5G16920 "AT5G16920" [Arabidopsis thaliana (taxid:3702)]

 Score = 223 (83.6 bits), Expect = 1.7e-18, P = 1.7e-18
 Identities = 48/132 (36%), Positives = 76/132 (57%)

Query:     4 HQINQTDLETAVAETRAKSYHEFVVLLKMIIASSNPLQSTAVTFLMPNDEKLS--EVVAT 61
             H  N  +L  A+ E    +Y  FV+L+ M+  S NP     VTFLMP D+ LS   ++  
Sbjct:    29 HVPNNHELSIAIEEMEKANYFSFVMLINML-PSVNPRFLANVTFLMPKDKTLSTSNIINQ 87

Query:    62 PEHLHDFILSHSIPTVLLNNNLLHFPNGTLVPSSQPGRMLSMTNSGKLGTYVNNARLVNF 121
              + + +F+L HSIP+ LL  +L   PNG++VPSS P   L ++N G+   ++NN ++++ 
Sbjct:    88 QDSVTEFLLRHSIPSSLLFEHLNLIPNGSIVPSSLPHYTLEISNGGRSNYFLNNVKIISR 147

Query:   122 NVWMNSQLKSHG 133
             N+     +K HG
Sbjct:   148 NICSLGSIKCHG 159


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.132   0.378    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      168       152   0.00073  105 3  11 22  0.46    31
                                                     30  0.40    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  556 (59 KB)
  Total size of DFA:  133 KB (2084 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  15.89u 0.14s 16.03t   Elapsed:  00:00:01
  Total cpu time:  15.89u 0.14s 16.03t   Elapsed:  00:00:01
  Start:  Thu May  9 17:10:00 2013   End:  Thu May  9 17:10:01 2013

GO:0003674 "molecular_function" evidence=ND

GO:0010584 "pollen exine formation" evidence=RCA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh1_pg.C_scaffold_6002251 annotation not avaliable (285 aa) (Arabidopsis lyrata)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	168
smart00554	99	FAS1 Four repeated domains in the Fasciclin I fami	99.69
PF02469	128	Fasciclin: Fasciclin domain; InterPro: IPR000782 T	99.48
COG2335	187	Secreted and surface protein containing fasciclin-	98.89
KOG1437	682	consensus Fasciclin and related adhesion glycoprot	95.57
KOG1437	682	consensus Fasciclin and related adhesion glycoprot	87.87

>smart00554 FAS1 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts

Probab=99.69  E-value=3e-17  Score=117.00  Aligned_cols=89  Identities=28%  Similarity=0.437  Sum_probs=78.3

Q ss_pred             EEEeeCChhhhcccCC------hh-hHHHHHhhcccCcccccccccCCCCCceeccCCCCceEEEEecCC-cceEEcceE
Q 039905           46 TFLMPNDEKLSEVVAT------PE-HLHDFILSHSIPTVLLNNNLLHFPNGTLVPSSQPGRMLSMTNSGK-LGTYVNNAR  117 (168)
Q Consensus        46 T~faP~D~als~~~~~------~~-~~~~~Ll~H~VP~~l~~~~L~~fp~Gt~vPT~l~g~~ItVTn~g~-~~l~lNnV~  117 (168)
                      |+|||+|+||++....      .+ .+..+|++|++|..+...+|..   |..++|.. |..|+|+..++ +.+++||++
T Consensus         1 TvfaP~d~Af~~~~~~~~~~l~~~~~l~~ll~~Hiv~~~~~~~~l~~---~~~~~Tl~-g~~l~v~~~~~~~~i~in~~~   76 (99)
T smart00554        1 TVFAPTDEAFQKLPPGTLNSLLADPKLKNLLLYHVVPGRLSSADLLN---GGTLPTLA-GSKLRVTRSGDSGTVTVNGAR   76 (99)
T ss_pred             CEeCcCHHHHHhcCHHHHHHHhCCHHHHHHHHhcEeCceEcHHHhcc---CCccccCC-CCEEEEEEeCCCCeEEEcceE
Confidence            8999999999886431      12 6789999999999999999986   88999987 99999999985 699999999


Q ss_pred             ecCCCcccCCeeEEeccccccc
Q 039905          118 LVNFNVWMNSQLKSHGISSSIT  139 (168)
Q Consensus       118 I~~Pdl~~n~~I~~HGId~vL~  139 (168)
                      |+.||+..+. -++|+||+||.
T Consensus        77 v~~~di~~~n-Gvih~Id~vL~   97 (99)
T smart00554       77 IVEADIAATN-GVVHVIDRVLL   97 (99)
T ss_pred             EEECCEecCC-eEEEEECceeC
Confidence            9999999876 79999999983

>PF02469 Fasciclin: Fasciclin domain; InterPro: IPR000782 The FAS1 (fasciclin-like) domain is an extracellular module of about 140 amino acid residues

Probab=99.48  E-value=1.9e-14  Score=105.81  Aligned_cols=115  Identities=19%  Similarity=0.236  Sum_probs=82.5

Q ss_pred             cHHHHHHHHHHHhcC-CCCCCCCceEEEeeCChhhhccc--------CChhhHHHHHhhcccCcccccccccCCCCCcee
Q 039905           22 SYHEFVVLLKMIIAS-SNPLQSTAVTFLMPNDEKLSEVV--------ATPEHLHDFILSHSIPTVLLNNNLLHFPNGTLV   92 (168)
Q Consensus        22 gY~~~a~lL~ml~~s-~~~~~~~~lT~faP~D~als~~~--------~~~~~~~~~Ll~H~VP~~l~~~~L~~fp~Gt~v   92 (168)
                      +|+.|+.+|+...-. .+....+..|+|||+|+|+++..        .+.+.+.++|++|+||..+..++|..-  ++.+
T Consensus         2 ~~s~f~~~l~~~~l~~~l~~~~~~~TvfaP~d~a~~~~~~~~~~~~~~~~~~l~~~l~~hiv~~~~~~~~l~~~--~~~~   79 (128)
T PF02469_consen    2 DLSTFSRLLEQAGLADLLNDSDGNYTVFAPTDDAFQKLSQETNSSLADSKEQLKSLLKYHIVPGSITSSDLRNG--KQTL   79 (128)
T ss_dssp             TTHHHHHHHHHTTCHHHHGCSSSSEEEEEE-HHHHHHSHHHHHHHHHTHHHHHHHHHHHTEEES---HCHHHCH--HEEE
T ss_pred             CHHHHHHHHHHcCCHHHHhcCCCCEEEEEECHHHHHhccccccchhhhhhhhHhhhhhhEEEcCceehhhhccc--cccc
Confidence            355566555532111 01012246999999999997652        156778999999999999988776654  4789


Q ss_pred             ccCCCCceEEEEec-CCcceEEcc-eEecCCCcccCCeeEEeccccccc
Q 039905           93 PSSQPGRMLSMTNS-GKLGTYVNN-ARLVNFNVWMNSQLKSHGISSSIT  139 (168)
Q Consensus        93 PT~l~g~~ItVTn~-g~~~l~lNn-V~I~~Pdl~~n~~I~~HGId~vL~  139 (168)
                      +|.+.|..+.|+.. +++.+++|| ++|+.+|+..+. -++|.||+||.
T Consensus        80 ~t~~~g~~~~v~~~~~~~~~~v~~~a~i~~~~~~~~n-G~ih~id~vL~  127 (128)
T PF02469_consen   80 ETLLNGQPLRVSSSPSNGTIYVNGKARIVKSDIEASN-GVIHIIDDVLI  127 (128)
T ss_dssp             EBSSTTCEEEEEEEGGTTEEEECCEEEESEEEEEESS-EEEEEESS-TS
T ss_pred             eeccCCCEEEEEEEecCCceEecCceEEEeCCEEeCC-EEEEEECceEC
Confidence            99999999999999 567999999 999999986554 67799999973

It has been suggested that the FAS1 domain represents an ancient cell adhesion domain common to plants and animals []; related FAS1 domains are also found in bacteria []. The crystal structure of FAS1 domains 3 and 4 of fasciclin I from Drosophila melanogaster (Fruit fly) has been determined, revealing a novel domain fold consisting of a seven-stranded beta wedge and at least five alpha helices; two well-ordered N-acetylglucosamine groups attached to a conserved asparagine are located in the interface region between the two FAS1 domains []. Fasciclin I is an insect neural cell adhesion molecule involved in axonal guidance that is attached to the membrane by a GPI-anchored protein. FAS1 domains are present in many secreted and membrane-anchored proteins. These proteins are usually GPI anchored and consist of: (i) a single FAS1 domain, (ii) a tandem array of FAS1 domains, or (iii) FAS1 domain(s) interspersed with other domains. Proteins known to contain a FAS1 domain include: Fasciclin I (4 FAS1 domains). Human TGF-beta induced Ig-H3 (BIgH3) protein (4 FAS1 domains), where the FAS1 domains mediate cell adhesion through an interaction with alpha3/beta1 integrin; mutation in the FAS1 domains result in corneal dystrophy []. Volvox major cell adhesion protein (2 FAS1 domains) []. Arabidopsis fasciclin-like arabinogalactan proteins (2 FAS1 domains) []. Mammalian stabilin protein, a family of fasciclin-like hyaluronan receptor homologues (7 FAS1 domains)[]. Human extracellular matrix protein periostin (4 FAS1 domains). Bacterial immunogenic protein MPT70 (1 FAS1 domain) []. The FAS1 domains of both human periostin (Q15063 from SWISSPROT) and BIgH3 (Q15582 from SWISSPROT) proteins were found to contain vitamin K-dependent gamma-carboxyglutamate residues []. Gamma-carboxyglutamate residues are more commonly associated with GLA domains (IPR000294 from INTERPRO), where they occur through post-translational modification catalysed by the vitamin K-dependent enzyme gamma-glutamylcarboxylase.; PDB: 1O70_A 1W7D_A 1W7E_A 1NYO_A 1X3B_A 2VXP_A.

>COG2335 Secreted and surface protein containing fasciclin-like repeats [Cell envelope biogenesis, outer membrane]

Probab=98.89  E-value=4e-09  Score=87.68  Aligned_cols=123  Identities=20%  Similarity=0.245  Sum_probs=88.4

Q ss_pred             ccHHHHHHHHhhccHHHHHHHHHHHhcC-CCCCCCCceEEEeeCChhhhccc--------C--ChhhHHHHHhhcccCcc
Q 039905            9 TDLETAVAETRAKSYHEFVVLLKMIIAS-SNPLQSTAVTFLMPNDEKLSEVV--------A--TPEHLHDFILSHSIPTV   77 (168)
Q Consensus         9 ~dl~~A~~~lr~~gY~~~a~lL~ml~~s-~~~~~~~~lT~faP~D~als~~~--------~--~~~~~~~~Ll~H~VP~~   77 (168)
                      .||.+.+.  .+..|.+++.+++-.... ++ .-.++.|+|+|+|+||++..        .  +...+...|.||+|++.
T Consensus        48 ~~iV~~a~--~~~~f~tl~~a~~aa~Lv~~L-~~~gp~TVFaPtn~AFa~lp~~T~~~Ll~pen~~~L~~iLtYHVv~Gk  124 (187)
T COG2335          48 ADIVESAA--NNPSFTTLVAALKAAGLVDTL-NETGPFTVFAPTNEAFAKLPAGTLDALLKPENKPLLTKILTYHVVEGK  124 (187)
T ss_pred             hHHHHHHc--cCcchHHHHHHHHhhhhHHHh-cCCCCeEEecCCHHHHHhCChhHHHHHhCccchhhhheeeEEEEEcCc
Confidence            34444433  555677776666521111 11 12346999999999998874        2  44556678899999999


Q ss_pred             cccccccCCCCCceeccCCCCceEEEEecCCcceEEcceEecCCCcccCCeeEEecccccccc
Q 039905           78 LLNNNLLHFPNGTLVPSSQPGRMLSMTNSGKLGTYVNNARLVNFNVWMNSQLKSHGISSSITC  140 (168)
Q Consensus        78 l~~~~L~~fp~Gt~vPT~l~g~~ItVTn~g~~~l~lNnV~I~~Pdl~~n~~I~~HGId~vL~~  140 (168)
                      ++-.+|..   +..+ +.+.|.+++|.-.++ +++||+++++-+|+=. +-=++|=||.||.-
T Consensus       125 ~~~~~l~~---~~~v-~t~~G~~~~i~~~~~-~~~Vn~a~v~~~di~a-~NgvIhvID~Vl~P  181 (187)
T COG2335         125 ITAADLKS---SGSV-KTVQGADLKIKVTGG-GVYVNDATVTIADINA-SNGVIHVIDKVLIP  181 (187)
T ss_pred             ccHHHhhc---cccc-eeecCceEEEEEcCC-cEEEeeeEEEeccEec-cCcEEEEEeeeccC
Confidence            99999998   3333 357899999999988 5999999999999653 34467999999854

>KOG1437 consensus Fasciclin and related adhesion glycoproteins [Cell wall/membrane/envelope biogenesis; Extracellular structures]

Probab=95.57  E-value=0.044  Score=53.50  Aligned_cols=93  Identities=20%  Similarity=0.228  Sum_probs=63.3

Q ss_pred             CCCCceEEEeeCChhhhcccCC------hhhHHHHHhhcccCcccccccccCCCCCceec------cCCCCceEEEEecC
Q 039905           40 LQSTAVTFLMPNDEKLSEVVAT------PEHLHDFILSHSIPTVLLNNNLLHFPNGTLVP------SSQPGRMLSMTNSG  107 (168)
Q Consensus        40 ~~~~~lT~faP~D~als~~~~~------~~~~~~~Ll~H~VP~~l~~~~L~~fp~Gt~vP------T~l~g~~ItVTn~g  107 (168)
                      ...++-|+|+|+|+++.+....      ...+.+||.||++|+-.-      +.-|.+--      -...|..+-+..--
T Consensus       537 ~~~~~~t~fvPt~ka~~~~~~~~~~~~~~~~l~~~l~yH~v~~~~~------ls~~~~~~v~~~~k~s~~~~~~~~~~~~  610 (682)
T KOG1437|consen  537 TPEGNYTLFVPTNKAWQKSTKDEKSLFHKKALQDFLKYHLVPGQSR------LSLGSSPYVMIQVKLSLRGDHLFFSLVN  610 (682)
T ss_pred             ccCCceEEEeecccccccCCcchhhcchHHHHHHHHHhccccceee------eecccccceeeeeeEEEecccEEeeeec
Confidence            3456799999999999887543      467899999999999875      22222222      22333333333333


Q ss_pred             CcceEEcceEecCCCccc-CCeeEEeccccccccc
Q 039905          108 KLGTYVNNARLVNFNVWM-NSQLKSHGISSSITCN  141 (168)
Q Consensus       108 ~~~l~lNnV~I~~Pdl~~-n~~I~~HGId~vL~~~  141 (168)
                      + ...+|-.+++.+|+|. |+  ++|-||.|+...
T Consensus       611 ~-~~~vn~e~~~~~~i~~~n~--~~h~i~~vl~p~  642 (682)
T KOG1437|consen  611 P-RGDVNKERLVGIDIMGTNG--VVHVIDLVLKPP  642 (682)
T ss_pred             c-ccceeeeeeeccceeeecc--eeEEEEEEcccC
Confidence            3 3457778999999985 44  679999888765

>KOG1437 consensus Fasciclin and related adhesion glycoproteins [Cell wall/membrane/envelope biogenesis; Extracellular structures]

Probab=87.87  E-value=0.66  Score=45.60  Aligned_cols=119  Identities=14%  Similarity=0.203  Sum_probs=72.0

Q ss_pred             HhhccHHHHHHHHHHHhcCCCCCCCCceEEEeeCChhhhcccCCh--hhHHHHHhhcccCcccccccccCCCCCceeccC
Q 039905           18 TRAKSYHEFVVLLKMIIASSNPLQSTAVTFLMPNDEKLSEVVATP--EHLHDFILSHSIPTVLLNNNLLHFPNGTLVPSS   95 (168)
Q Consensus        18 lr~~gY~~~a~lL~ml~~s~~~~~~~~lT~faP~D~als~~~~~~--~~~~~~Ll~H~VP~~l~~~~L~~fp~Gt~vPT~   95 (168)
                      -+..--+++..++..+...+.-..++..|+|+|.|+++..-....  ...+.+|.+|.||-.+..+++.+-  ++.++|.
T Consensus       380 a~e~~~st~~rlv~elgll~~L~~n~e~t~~lp~n~~fd~~~~~~~r~l~~qIL~~HII~~~~~~~~~y~~--~~~v~t~  457 (682)
T KOG1437|consen  380 AREDEISTSMRLVAELGLLTALAPNDEATLLLPTNNLFDDLTPLESRRLAEQILYNHIIPEYLTSSSMYNG--QTTVRTL  457 (682)
T ss_pred             HhcccccHHHHHHHhccceEEEcCCCceEEeeehhhhccCCChhhhHHHHHHHHHHhCcchhhhhhhhhcc--cceeecc
Confidence            344456667677765554331123334999999999997733211  125889999999999998887653  3367666


Q ss_pred             CCCceEEEEecC-----CcceEEcc-eEecCCCccc-CCeeEEecccccccc
Q 039905           96 QPGRMLSMTNSG-----KLGTYVNN-ARLVNFNVWM-NSQLKSHGISSSITC  140 (168)
Q Consensus        96 l~g~~ItVTn~g-----~~~l~lNn-V~I~~Pdl~~-n~~I~~HGId~vL~~  140 (168)
                      -..+-+.-+-..     .+.+.++| +.|+.-|+.. ||  ++|.||.|+.-
T Consensus       458 g~~~l~~fv~r~~~s~~~t~i~~~~~~~Ii~aDi~~~nG--vvH~id~vl~p  507 (682)
T KOG1437|consen  458 GKNKLLYFVYRHSVSANVTDILIGNEACIIEADISVKNG--VVHIIDRVLDP  507 (682)
T ss_pred             CCeEEEEEEecccccccceeeeccceeeEEecccceecC--ceEEeeEEcCc
Confidence            555444332221     22344444 4555666653 34  46777777765

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	168
2vxp_A	132	Transforming growth factor-beta-induced protein IG	99.67
1w7d_A	137	Fasciclin-like protein; cell adhesion; NMR {Rhodob	99.66
1nyo_A	163	Immunogenic protein MPT70; seven-stranded beta-bar	99.57
1o70_A	324	Fasciclin I, FAS I, FCN; cell adhesion, AXON guida	99.13
1o70_A	324	Fasciclin I, FAS I, FCN; cell adhesion, AXON guida	99.11
4egx_A	184	Kinesin-like protein KIF1A; FHA domain, transport	84.28

>2vxp_A Transforming growth factor-beta-induced protein IG-H3; RGD-containing collagen-associated protein, FAS1, BIGH3, vision, amyloid, RGD-CAP, secreted; 2.5A {Homo sapiens} PDB: 1x3b_A

Probab=99.67  E-value=6.9e-17  Score=121.61  Aligned_cols=111  Identities=14%  Similarity=0.183  Sum_probs=84.4

Q ss_pred             ccHHHHHHHHHHHhcCCCCCCCCceEEEeeCChhhhccc--------CChhhHHHHHhhcccCcccccccccCCCCCcee
Q 039905           21 KSYHEFVVLLKMIIASSNPLQSTAVTFLMPNDEKLSEVV--------ATPEHLHDFILSHSIPTVLLNNNLLHFPNGTLV   92 (168)
Q Consensus        21 ~gY~~~a~lL~ml~~s~~~~~~~~lT~faP~D~als~~~--------~~~~~~~~~Ll~H~VP~~l~~~~L~~fp~Gt~v   92 (168)
                      ..|+.|+.+++.......-...++.|+|||+|+||.+..        .+.+.+.++|+||++|..+.-.+|   +.|..+
T Consensus        12 ~~fs~~~~~l~~agl~~~L~~~~~~TvFAPtn~Af~~l~~~~~~~l~~~~~~l~~iL~yHvv~~~~~~~~l---~~~~~~   88 (132)
T 2vxp_A           12 NRFSMLVAAIQSAGLTETLNREGVYTVFAPTNEAFRALPPRERSRLLGDAKELANILKYHIGDEILVSGGI---GALVRL   88 (132)
T ss_dssp             TTCHHHHHHHHHHTCHHHHHSSCCEEEEEECHHHHHHSCHHHHHHHHTCHHHHHHHHHHSBBSSCCCSTTC---SSCEEE
T ss_pred             CCHHHHHHHHHHcCcHHHHcCCCCEEEEeECHHHHHhhCHHHHHHHhcCHHHHHHHHHhcCcCceeehhhc---cCCceE
Confidence            567777766663111000012346999999999998763        256788899999999998876665   467888


Q ss_pred             ccCCCCceEEEEecCCcceEEcceEecCCCcc-cCCeeEEecccccc
Q 039905           93 PSSQPGRMLSMTNSGKLGTYVNNARLVNFNVW-MNSQLKSHGISSSI  138 (168)
Q Consensus        93 PT~l~g~~ItVTn~g~~~l~lNnV~I~~Pdl~-~n~~I~~HGId~vL  138 (168)
                      +| +.|..|+|+..++ .+++||++|+.+|+. .||  ++|.||+||
T Consensus        89 ~t-l~G~~l~v~~~~~-~v~vn~a~v~~~di~a~NG--vIHvID~VL  131 (132)
T 2vxp_A           89 KS-LQGDKLEVSLKNN-VVSVNKEPVAEPDIMATNG--VVHVITNVL  131 (132)
T ss_dssp             EB-TTSSEEEEEEETT-EEEESSCBEEEEEEEETTE--EEEEESSCC
T ss_pred             ec-CCCCEEEEEEeCC-EEEEeccEEEEcceecCCE--EEEEECcEe
Confidence            87 4788999998876 799999999999986 456  799999997

>1w7d_A Fasciclin-like protein; cell adhesion; NMR {Rhodobacter sphaeroides} PDB: 1w7e_A

Probab=99.66  E-value=5.2e-17  Score=122.93  Aligned_cols=89  Identities=21%  Similarity=0.333  Sum_probs=75.1

Q ss_pred             CceEEEeeCChhhhcccC----------ChhhHHHHHhhcccCcccccccccCCCCCceeccCCCCceEEEEecCCcceE
Q 039905           43 TAVTFLMPNDEKLSEVVA----------TPEHLHDFILSHSIPTVLLNNNLLHFPNGTLVPSSQPGRMLSMTNSGKLGTY  112 (168)
Q Consensus        43 ~~lT~faP~D~als~~~~----------~~~~~~~~Ll~H~VP~~l~~~~L~~fp~Gt~vPT~l~g~~ItVTn~g~~~l~  112 (168)
                      ++.|+|||+|+||.+...          +.+.+.++|+||+||..+...+|.   .|..++| +.|..|+|+..++  ++
T Consensus        35 ~~~TvFAPtn~Af~~l~~~~~~~l~~~~~~~~l~~lL~yHvv~~~~~~~~l~---~~~~~~t-l~G~~l~v~~~~g--v~  108 (137)
T 1w7d_A           35 GPFTVFAPTDAAFAALPEGTVEDLLKPENKEKLTEILTYHVVPGEVMSSDLT---EGMTAET-VEGGALTVTLEGG--PK  108 (137)
T ss_dssp             SCEEEECCCHHHHTTSTTTHHHHTTSHHHHHHHHHHHHHHEEESCCCTTTSC---SSEEEEC-TTSCEEEEECTTS--CE
T ss_pred             CCEEEEEECHHHHHHcCHhHHHHHhCcCCHHHHHHHHHhhEeCcEEcHHHhc---CCCeeec-cCCceEEEEecCC--EE
Confidence            469999999999988632          456788999999999998877765   4778876 5789999998865  99


Q ss_pred             EcceEecCCCcc-cCCeeEEeccccccc
Q 039905          113 VNNARLVNFNVW-MNSQLKSHGISSSIT  139 (168)
Q Consensus       113 lNnV~I~~Pdl~-~n~~I~~HGId~vL~  139 (168)
                      +||++|+.+|+. .||  ++|.||+||.
T Consensus       109 vn~a~v~~~di~~~NG--vIHvID~VL~  134 (137)
T 1w7d_A          109 VNGVSISQPDVDASNG--VIHVIDGVLM  134 (137)
T ss_dssp             ETTEECSBCCCBCSSS--EEEBCSSCCS
T ss_pred             EeCcEEEECCeecCCe--EEEEECeeeC
Confidence            999999999986 567  6999999985

>1nyo_A Immunogenic protein MPT70; seven-stranded beta-barrel, fasciclin domain, structural genomics, PSI, protein structure initiative; NMR {Mycobacterium tuberculosis} SCOP: b.118.1.1

Probab=99.57  E-value=2.4e-15  Score=117.72  Aligned_cols=113  Identities=18%  Similarity=0.219  Sum_probs=87.9

Q ss_pred             HHHHh-hccHHHHHHHHH-----H--HhcCCCCCCCCceEEEeeCChhhhcccC--------ChhhHHHHHhhcccCccc
Q 039905           15 VAETR-AKSYHEFVVLLK-----M--IIASSNPLQSTAVTFLMPNDEKLSEVVA--------TPEHLHDFILSHSIPTVL   78 (168)
Q Consensus        15 ~~~lr-~~gY~~~a~lL~-----m--l~~s~~~~~~~~lT~faP~D~als~~~~--------~~~~~~~~Ll~H~VP~~l   78 (168)
                      ++.|+ ...|+.|+.+|+     -  +.+ .+. ..+ .|+|||+|+||.+...        +.+.+.++|+||+||..+
T Consensus        31 ~~~l~~~~~~s~f~~~l~~~~~~~agl~~-~L~-~~g-~TvFAPtn~AF~~l~~~~~~~L~~~~~~L~~iL~yHvv~g~~  107 (163)
T 1nyo_A           31 AVAASNNPELTTLTAALSGQLNPQVNLVD-TLN-SGQ-YTVFAPTNAAFSKLPASTIDELKTNSSLLTSILTYHVVAGQT  107 (163)
T ss_dssp             HHHHTTSTTTHHHHHHHHSSSCTTCCCHH-HHT-SSS-EEECCBCHHHHHHSCHHHHHHHTTCSSHHHHHHHHTEEESCC
T ss_pred             HHHHHhCCCHHHHHHHHHhccccccCHHH-HhC-CCC-cEEEEECHHHHHhccHHHHHHHhcCHHHHHHHHHhceECCEE
Confidence            34444 456888888887     2  111 111 234 9999999999987631        457789999999999999


Q ss_pred             ccccccCCCCCceeccCCCCceEEEEecCCcceEEcceEecCCCccc-CCeeEEeccccccc
Q 039905           79 LNNNLLHFPNGTLVPSSQPGRMLSMTNSGKLGTYVNNARLVNFNVWM-NSQLKSHGISSSIT  139 (168)
Q Consensus        79 ~~~~L~~fp~Gt~vPT~l~g~~ItVTn~g~~~l~lNnV~I~~Pdl~~-n~~I~~HGId~vL~  139 (168)
                      ...+|.    | .++|. .|..|+|+..++ .++|||++|+.+|+.. |+  ++|.||+||.
T Consensus       108 ~~~~l~----g-~~~Tl-~G~~l~v~~~~~-~v~vn~a~V~~~di~a~NG--vIHvID~VL~  160 (163)
T 1nyo_A          108 SPANVV----G-TRQTL-QGASVTVTGQGN-SLKVGNADVVCGGVSTANA--TVYMIDSVLM  160 (163)
T ss_dssp             CTTTSC----E-EEECT-TSSEEEEEECSS-CEEETTEECSSBCCCCSSE--EEBCBSSCCC
T ss_pred             cHHHhC----C-ccccC-CCCEEEEEEECC-EEEEeccEEEECceEcCCE--EEEEECcEeC
Confidence            999986    5 67775 799999998876 7999999999999975 44  7999999985

>1o70_A Fasciclin I, FAS I, FCN; cell adhesion, AXON guidance, extracellular module, genetic disorder, corneal dystrophy; HET: NAG; 2.6A {Drosophila melanogaster} SCOP: b.118.1.1 b.118.1.1

Probab=99.13  E-value=3.1e-11  Score=101.70  Aligned_cols=96  Identities=20%  Similarity=0.242  Sum_probs=75.2

Q ss_pred             CceEEEeeCChhhhccc-----CChhhHHHHHhhcccCcccccccccCCCCC-c-eeccCCCCceE--EEEecC-CcceE
Q 039905           43 TAVTFLMPNDEKLSEVV-----ATPEHLHDFILSHSIPTVLLNNNLLHFPNG-T-LVPSSQPGRML--SMTNSG-KLGTY  112 (168)
Q Consensus        43 ~~lT~faP~D~als~~~-----~~~~~~~~~Ll~H~VP~~l~~~~L~~fp~G-t-~vPT~l~g~~I--tVTn~g-~~~l~  112 (168)
                      ++.|+|||+|+||.+..     .+.+.+.++|++|+||..+...+|...+.| . .++|...+..+  +|+.++ +..+.
T Consensus        46 ~~~TvFAPtn~Af~~~~~~~l~~~~~~l~~iL~yHvv~g~~~~~~l~~~~~~~~~~~~Tl~g~~~l~~~v~~~~~~~~v~  125 (324)
T 1o70_A           46 TEVTILAPSNEAWNSSNINNVLRDRNKMRQILNMHIIKDRLNVDKIRQKNANLIAQVPTVNNNTFLYFNVRGEGSDTVIT  125 (324)
T ss_dssp             SSEEEEEECHHHHHHTCTHHHHTCHHHHHHHHHHTEESSCCCHHHHHHHTSSSCCCEEBSSTTCEEEEEEESCGGGCEEE
T ss_pred             CCeEEEEEChHhhhcccHhhhhCCHHHHHHHHHhcEeCCeecHHHHhhccCCCceEEEcCCCCceEEEEEeecCCceEEE
Confidence            46999999999997653     266788999999999999999999876632 2 78888766544  454432 34689


Q ss_pred             Ecc----eEecCCCccc-CCeeEEecccccccc
Q 039905          113 VNN----ARLVNFNVWM-NSQLKSHGISSSITC  140 (168)
Q Consensus       113 lNn----V~I~~Pdl~~-n~~I~~HGId~vL~~  140 (168)
                      +||    ++|+.+|+.. ||  ++|.||+||.-
T Consensus       126 v~~g~~~a~v~~~di~~~NG--vIhvID~VL~p  156 (324)
T 1o70_A          126 VEGGGVNATVIQADVAQTNG--YVHIIDHVLGV  156 (324)
T ss_dssp             EEETTEEEEEEEEEEECSSE--EEEEESSCTTS
T ss_pred             EcCCceeEEEEeccccccCc--EEEEEchhhhh
Confidence            995    9999999864 56  79999999965

>1o70_A Fasciclin I, FAS I, FCN; cell adhesion, AXON guidance, extracellular module, genetic disorder, corneal dystrophy; HET: NAG; 2.6A {Drosophila melanogaster} SCOP: b.118.1.1 b.118.1.1

Probab=99.11  E-value=1.9e-11  Score=103.01  Aligned_cols=117  Identities=15%  Similarity=0.162  Sum_probs=82.9

Q ss_pred             ccHHHHHHHHHHHhcCCCC--C--CCCceEEEeeCChhhhccc----------C--Ch-hhHHHHHhhcccCc--ccccc
Q 039905           21 KSYHEFVVLLKMIIASSNP--L--QSTAVTFLMPNDEKLSEVV----------A--TP-EHLHDFILSHSIPT--VLLNN   81 (168)
Q Consensus        21 ~gY~~~a~lL~ml~~s~~~--~--~~~~lT~faP~D~als~~~----------~--~~-~~~~~~Ll~H~VP~--~l~~~   81 (168)
                      ..|+.|+.+++.   +.+.  .  -.++.|+|||+|+||.+..          .  +. +.+.++|+||+||.  .++..
T Consensus       169 ~~fs~~~~~l~~---~gl~~~L~~~~~~~TvFAPtd~Af~~l~~~~~~~~~~~l~~~~~~~l~~iL~yHvv~~~~~~~~~  245 (324)
T 1o70_A          169 PMMSDTYKMGKF---SHFNDQLNNTQRRFTYFVPRDKGWQKTELDYPSAHKKLFMADFSYHSKSILERHLAISDKEYTMK  245 (324)
T ss_dssp             GGGHHHHHHTTT---TTTTGGGGCSSSEEEEEEECHHHHHHHHHHCHHHHHHHTSGGGHHHHHHHHHTTEEEESSCCCHH
T ss_pred             chHHHHHHHHHh---hCHHHHhCCCCCCeEEEEeChHHHHhhhhhchhHHHHHhccCcHHHHHHHHHhcEeCCcceEcHH
Confidence            457777666552   2221  1  2357999999999998762          1  11 38899999999999  88888


Q ss_pred             cccCCC--CCc-eeccCCCCceEEEEec-CCcceEEc----ceEecCCCcc-cCCeeEEecccccccccCCc
Q 039905           82 NLLHFP--NGT-LVPSSQPGRMLSMTNS-GKLGTYVN----NARLVNFNVW-MNSQLKSHGISSSITCNSPI  144 (168)
Q Consensus        82 ~L~~fp--~Gt-~vPT~l~g~~ItVTn~-g~~~l~lN----nV~I~~Pdl~-~n~~I~~HGId~vL~~~~~~  144 (168)
                      +|....  .|. .++|..  ..++|+.. .++.+++|    +++|+.+|+. .||  ++|.||+||.=.+..
T Consensus       246 ~l~~~~~~~~~~~~~Tl~--~~l~v~~~~~~~~v~v~~~~~~a~v~~~di~~~NG--vIHvID~VL~P~~~~  313 (324)
T 1o70_A          246 DLVKFSQESGSVILPTFR--DSLSIRVEEEAGRYVIIWNYKKINVYRPDVECTNG--IIHVIDYPLLEEKDV  313 (324)
T ss_dssp             HHHHHHHHSSSEEEECSS--SEEEEEEEEETTEEEEEETTEEEEEEEEEEEETTE--EEEEESSCSCCTTTT
T ss_pred             HHhhhccCCCeeeeeccC--CcEEEEEEecCCEEEEEecCceeEEEEcccccCCC--eEEEeceeecCCccc
Confidence            887643  223 478876  56777653 23378888    8999999987 466  799999999755543

>4egx_A Kinesin-like protein KIF1A; FHA domain, transport protein; 2.51A {Homo sapiens}

Probab=84.28  E-value=0.93  Score=35.97  Aligned_cols=45  Identities=18%  Similarity=0.247  Sum_probs=36.3

Q ss_pred             eEEEEecCCcceEEcceEecCCCcccCCeeEEecccccccccCCc
Q 039905          100 MLSMTNSGKLGTYVNNARLVNFNVWMNSQLKSHGISSSITCNSPI  144 (168)
Q Consensus       100 ~ItVTn~g~~~l~lNnV~I~~Pdl~~n~~I~~HGId~vL~~~~~~  144 (168)
                      .++++-..+...+|||.+|..|=....+-.++-|=.-++.|+.|-
T Consensus       131 ~vtl~p~~~a~t~VNG~~I~~~~~L~~GDrI~lG~~h~Frfn~P~  175 (184)
T 4egx_A          131 VVTLEPCEGADTYVNGKKVTEPSILRSGNRIIMGKSHVFRFNHPE  175 (184)
T ss_dssp             EEEEEECTTCCEEETTEECCSCEECCTTCEEEETTTEEEEEECHH
T ss_pred             EEEEeeCCCCeEEEcCEEccccEEcCCCCEEEECCCCEEEECChH
Confidence            456666666689999999999987888777789988888998773

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	168
d1nyoa_	163	Immunogenic protein MPT70 {Mycobacterium tuberculo	99.28
d1o70a1	140	Fasciclin I {Fruit fly (Drosophila melanogaster) [	99.19
d1o70a2	157	Fasciclin I {Fruit fly (Drosophila melanogaster) [	99.04

>d1nyoa_ b.118.1.1 (A:) Immunogenic protein MPT70 {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: FAS1 domain
superfamily: FAS1 domain
family: FAS1 domain
domain: Immunogenic protein MPT70
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.28  E-value=2.5e-12  Score=99.85  Aligned_cols=111  Identities=18%  Similarity=0.168  Sum_probs=83.3

Q ss_pred             hccHHHHHHHHHHH--hcCCC--CCCCCceEEEeeCChhhhccc--------CChhhHHHHHhhcccCcccccccccCCC
Q 039905           20 AKSYHEFVVLLKMI--IASSN--PLQSTAVTFLMPNDEKLSEVV--------ATPEHLHDFILSHSIPTVLLNNNLLHFP   87 (168)
Q Consensus        20 ~~gY~~~a~lL~ml--~~s~~--~~~~~~lT~faP~D~als~~~--------~~~~~~~~~Ll~H~VP~~l~~~~L~~fp   87 (168)
                      +-.+++++..+...  ....+  ....++.|+|||+|+||.+..        .+.+.+.++|+||+||..+...+|..  
T Consensus        37 ~p~lstl~~Al~a~~~~~a~L~~~L~~gpfTvFAPtn~AF~~l~~~~~~~l~~~~~~L~~iL~yHVv~g~~~~~~l~~--  114 (163)
T d1nyoa_          37 NPELTTLTAALSGQLNPQVNLVDTLNSGQYTVFAPTNAAFSKLPASTIDELKTNSSLLTSILTYHVVAGQTSPANVVG--  114 (163)
T ss_dssp             STTTHHHHHHHHSSSCTTCCCHHHHTSSSEEECCBCHHHHHHSCHHHHHHHTTCSSHHHHHHHHTEEESCCCTTTSCE--
T ss_pred             CCchHHHHHHHhhccccccchhHhhcCCCeEEEEECcHHHHhcCHHHHHhhhhhHHHHHHhhhhhhhhhhhhhhhhhh--
Confidence            33477777666520  00011  012456999999999998752        24467899999999999999999852  


Q ss_pred             CCceeccCCCCceEEEEecCCcceEEcceEecCCCccc-CCeeEEeccccccc
Q 039905           88 NGTLVPSSQPGRMLSMTNSGKLGTYVNNARLVNFNVWM-NSQLKSHGISSSIT  139 (168)
Q Consensus        88 ~Gt~vPT~l~g~~ItVTn~g~~~l~lNnV~I~~Pdl~~-n~~I~~HGId~vL~  139 (168)
                         .++ .+.|..|+|+..++ .+++|+++|+.+|+-. ||  ++|-||+||-
T Consensus       115 ---~~~-Tl~G~~l~v~~~~~-~i~v~~a~Vv~~di~a~NG--vIHvID~VLl  160 (163)
T d1nyoa_         115 ---TRQ-TLQGASVTVTGQGN-SLKVGNADVVCGGVSTANA--TVYMIDSVLM  160 (163)
T ss_dssp             ---EEE-CTTSSEEEEEECSS-CEEETTEECSSBCCCCSSE--EEBCBSSCCC
T ss_pred             ---hhh-hccCcceeEEecCC-EEEEeceEEEECCeecCCc--EEEEECcccc
Confidence               344 57899999999876 8999999999999986 56  6799999984

>d1o70a1 b.118.1.1 (A:328-467) Fasciclin I {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: FAS1 domain
superfamily: FAS1 domain
family: FAS1 domain
domain: Fasciclin I
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.19  E-value=2.5e-11  Score=88.23  Aligned_cols=94  Identities=20%  Similarity=0.206  Sum_probs=72.3

Q ss_pred             ceEEEeeCChhhhcccC-----ChhhHHHHHhhcccCcccccccccCCCC--CceeccCCCCceEEEEecC--C-cceEE
Q 039905           44 AVTFLMPNDEKLSEVVA-----TPEHLHDFILSHSIPTVLLNNNLLHFPN--GTLVPSSQPGRMLSMTNSG--K-LGTYV  113 (168)
Q Consensus        44 ~lT~faP~D~als~~~~-----~~~~~~~~Ll~H~VP~~l~~~~L~~fp~--Gt~vPT~l~g~~ItVTn~g--~-~~l~l  113 (168)
                      +.|+|||+|+||.+...     +.+.+..+|+||++|..+...+|.....  ...++|...+....++..+  . ..+.+
T Consensus        29 ~~TvFAPtn~Af~~~~~~~~~~~~~~l~~~l~yHiv~~~~~~~~l~~~~~~~~~~~~t~~g~~~~~~~~~~~~~~~~~~~  108 (140)
T d1o70a1          29 EVTILAPSNEAWNSSNINNVLRDRNKMRQILNMHIIKDRLNVDKIRQKNANLIAQVPTVNNNTFLYFNVRGEGSDTVITV  108 (140)
T ss_dssp             SEEEEEECHHHHHHTCTHHHHTCHHHHHHHHHHTEESSCCCHHHHHHHTSSSCCCEEBSSTTCEEEEEEESCGGGCEEEE
T ss_pred             CEEEEEECHHHHhcCChhhhcCCHHHHHHHHHhhccCCeEEHHHHhcCcccCceEeeecCCCceEEEEEeccceeEEEEe
Confidence            59999999999987643     5677899999999999999999986544  4468888877665544433  2 23443


Q ss_pred             ----cceEecCCCccc-CCeeEEeccccccc
Q 039905          114 ----NNARLVNFNVWM-NSQLKSHGISSSIT  139 (168)
Q Consensus       114 ----NnV~I~~Pdl~~-n~~I~~HGId~vL~  139 (168)
                          ++++|+.+|+.. ||  ++|.||+||.
T Consensus       109 ~~~~~~a~V~~~Di~~~NG--vIH~ID~VL~  137 (140)
T d1o70a1         109 EGGGVNATVIQADVAQTNG--YVHIIDHVLG  137 (140)
T ss_dssp             EETTEEEEEEEEEEECSSE--EEEEESSCTT
T ss_pred             cCCcceEEEEeCCEecCCe--EEEEECCccC
Confidence                458999999875 55  7999999984

>d1o70a2 b.118.1.1 (A:468-624) Fasciclin I {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: FAS1 domain
superfamily: FAS1 domain
family: FAS1 domain
domain: Fasciclin I
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.04  E-value=5.2e-11  Score=88.39  Aligned_cols=100  Identities=10%  Similarity=0.084  Sum_probs=70.3

Q ss_pred             CCceEEEeeCChhhhcccC-------------ChhhHHHHHhhcccCccccccccc-----CCCCCceeccCCCCceEEE
Q 039905           42 STAVTFLMPNDEKLSEVVA-------------TPEHLHDFILSHSIPTVLLNNNLL-----HFPNGTLVPSSQPGRMLSM  103 (168)
Q Consensus        42 ~~~lT~faP~D~als~~~~-------------~~~~~~~~Ll~H~VP~~l~~~~L~-----~fp~Gt~vPT~l~g~~ItV  103 (168)
                      +++.|+|||+|+||.+...             ..+.+..+|++|++|....+.+..     ....+...+|.-....+.+
T Consensus        33 ~~~~TvFaPtn~Af~~l~~~~~~~~~~~~~~~~~~~l~~il~~Hiv~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  112 (157)
T d1o70a2          33 QRRFTYFVPRDKGWQKTELDYPSAHKKLFMADFSYHSKSILERHLAISDKEYTMKDLVKFSQESGSVILPTFRDSLSIRV  112 (157)
T ss_dssp             SSEEEEEEECHHHHHHHHHHCHHHHHHHTSGGGHHHHHHHHHTTEEEESSCCCHHHHHHHHHHSSSEEEECSSSEEEEEE
T ss_pred             CCceEEEecCHHHHHHhhhhccchhhhhcCcccHHHHHHHheeEEecccccchhhhhhhhhccCCceeEEecCCcEEEEE
Confidence            3469999999999987521             135678899999999877655432     2233445555544455556


Q ss_pred             EecCCcceEE----cceEecCCCccc-CCeeEEecccccccccCCc
Q 039905          104 TNSGKLGTYV----NNARLVNFNVWM-NSQLKSHGISSSITCNSPI  144 (168)
Q Consensus       104 Tn~g~~~l~l----NnV~I~~Pdl~~-n~~I~~HGId~vL~~~~~~  144 (168)
                      .+.++ .+.+    |+++|+.+|+.. ||  ++|.||+||--.++.
T Consensus       113 ~~~~~-~~~~~~~~~~a~V~~~Di~a~NG--viHvID~VLlp~~d~  155 (157)
T d1o70a2         113 EEEAG-RYVIIWNYKKINVYRPDVECTNG--IIHVIDYPLLEEKDV  155 (157)
T ss_dssp             EEETT-EEEEEETTEEEEEEEEEEEETTE--EEEEESSCSCCTTTT
T ss_pred             EcCCc-EEEEecCCccceEEECCEecCCe--EEEEECceecCCCCc
Confidence            66655 4443    679999999985 56  799999999776553