Citrus Sinensis ID: 039915

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------
Protein Sequence
MALKNVCLVLVVTLCLLAYASTATRTSYDHKVNTPGYDLAARLQAYQGQFMECWNSLQALSSCSSLTVQFFLTGKADIASCCGSIDIIWSKCSWPSAVISLGYTPAEANILKTYCDAVSAPPANRKP
Secondary Structure (PSIPRED)
ccccHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHccccHHHHHHHcccccHHHHHHHHHccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHccccccHHHHHHHHHHHHHccccEEEEEEcccccccHHHHHHHEHHccccHHHHHHHHcccHHHHHHHcccccccccccccccc
Coil and Loop (DISEMBL)
MALKNVCLVLVVTLCLLAYAStatrtsydhkvntpgyDLAARLQAYQGQFMECWNSlqalsscssLTVQFFLtgkadiasccgsidiiwskcswpsavislgytpaEANILKTYCdavsappanrkp
Flexible Loop (DISEMBL)
MALKNVCLVLVVTLCLLAYAstatrtsydhkvnTPGYDLAARLQAYQGQFMECWNSLQALSSCSSLTVQFFLTGKADIASCCGSIDIIWSKCSWPSAVISLGYTPAEANILKTYCDavsappanrkp
Low Complexity Region (SEG)
MALKNvclvlvvtlcllAYASTATRTSYDHKVNTPGYDLAARLQAYQGQFMECWNSLQALSSCSSLTVQFFLTGKADIASCCGSIDIIWSKCSWPSAVISLGYTPAEANILKTYCDAVSAPPANRKP
Disordered region (IsUnstruct)
***KNVCLVLVVTLCLLAYASTATRTSYDHKVNTPGYDLAARLQAYQGQFMECWNSLQALSSCSSLTVQFFLTGKADIASCCGSIDIIWSKCSWPSAVISLGYTPAEANILKTYCDAV*********
Disordered Region (DISOPRED)
*****VCLVLVVTLCLLAYASTA*************************QFMECWNSLQALSSCSSLTVQFFLTGKADIASCCGSIDIIWSKCSWPSAVISLGYTPAEANILKTYC************
Disordered Region (DISEMBL)
MALKNVCLVLVVTLCLLAYASTATRTSYDHKVNTPGYDLAARLQAYQGQFMECWNSLQALSSCSSLTVQFFLTGKADIASCCGSIDIIWSKCSWPSAVISLGYTPAEANILKTYCDAVS********
Disordered Region (DISPRO)
****NVCLVLVVTLCLLAYASTATR************DLAAR**AYQGQFMECWNSLQALSSCSSLTVQFFLTGKADIASCCGSIDIIWSKCSWPSAVISLGYTPAEANILKTYCDA**********
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MALKNVCLVLVVTLCLLAYASTATRTSYDHKVNTPGYDLAARLQAYQGQFMECWNSLQALSSCSSLTVQFFLTGKADIASCCGSIDIIWSKCSWPSAVISLGYTPAEANILKTYCDAVSAPPANRKP
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	127	2.2.26 [Sep-21-2011]
Q9T039	127	Egg cell-secreted protein	yes	no	0.858	0.858	0.413	7e-17
Q9SJ24	125	Egg cell-secreted protein	no	no	0.803	0.816	0.357	5e-13
Q9SJ23	125	Egg cell-secreted protein	no	no	0.606	0.616	0.395	3e-12
Q9SRD8	158	Egg cell-secreted protein	no	no	0.826	0.664	0.351	8e-10
Q9FGG1	155	Egg cell-secreted protein	no	no	0.905	0.741	0.288	1e-07

>sp|Q9T039|EC14_ARATH Egg cell-secreted protein 1.4 OS=Arabidopsis thaliana GN=EC1.4 PE=2 SV=1

 Score = 85.9 bits (211), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 48/116 (41%), Positives = 70/116 (60%), Gaps = 7/116 (6%)

Query: 1   MALKNVCLVLVVTLCLLAYASTATRTSYDHKVNTPGYDLAARLQAYQGQFMECWNSLQAL 60
           MA     L   VTL ++   +T +      + +T   ++AARLQ+  G  MECWN+L  L
Sbjct: 1   MASNTTFLFSTVTLLIILLNTTVSGRDLPAESST---NIAARLQS--GGLMECWNALYEL 55

Query: 61  SSCSSLTVQFFLTGKADIA-SCCGSIDIIWSKCSWPSAVISLGYTPAEANILKTYC 115
            SC++  V FFL G+  +  SCC S+DII + C WP+ + SLG+TP EAN+L+ +C
Sbjct: 56  KSCTNEIVLFFLNGETKLGVSCCESVDIITTNC-WPAMLTSLGFTPEEANVLRGFC 110

Involved in the regulation of gamete interactions during the double fertilization and to prevent multiple-pollen tube attraction; mediates the redistribution of the gamete fusogen HAP2/GCS1 to the cell surface after secretion upon sperm arrival.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9SJ24|EC12_ARATH Egg cell-secreted protein 1.2 OS=Arabidopsis thaliana GN=EC1.2 PE=2 SV=1

 Score = 73.2 bits (178), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 65/109 (59%), Gaps = 7/109 (6%)

Query: 10  LVVTLCLLAYASTATRTSYDHKVNTPGYDLAARLQAYQGQFMECWNSLQALSSCSSLTVQ 69
           L  T+ +L   + + RT  + + +T   ++AARL    G  MECWN+L  L SC++  V 
Sbjct: 8   LFATIAILLVLNISGRTLPETEDST---NIAARLNG--GGLMECWNALYELKSCTNEIVL 62

Query: 70  FFLTGKADIA-SCCGSIDIIWSKCSWPSAVISLGYTPAEANILKTYCDA 117
           FFL G+  +   CC ++++I + C WP+ + SLG+T  E N+L+ +C +
Sbjct: 63  FFLNGETKLGVDCCQAVEVITTDC-WPAMLTSLGFTSDETNVLRGFCQS 110

Involved in the regulation of gamete interactions during the double fertilization and to prevent multiple-pollen tube attraction; mediates the redistribution of the gamete fusogen HAP2/GCS1 to the cell surface after secretion upon sperm arrival.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SJ23|EC13_ARATH Egg cell-secreted protein 1.3 OS=Arabidopsis thaliana GN=EC1.3 PE=2 SV=1

 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 32/81 (39%), Positives = 52/81 (64%), Gaps = 4/81 (4%)

Query: 38  DLAARLQAYQGQFMECWNSLQALSSCSSLTVQFFLTGKADIA-SCCGSIDIIWSKCSWPS 96
           ++AARL    G  M+CW++L  L SC++  V FFL G+  +   CC ++D+I + C WP+
Sbjct: 33  NIAARLTG--GGLMQCWDALYELKSCTNEIVLFFLNGETKLGYGCCNAVDVITTDC-WPA 89

Query: 97  AVISLGYTPAEANILKTYCDA 117
            + SLG+T  E N+L+ +C +
Sbjct: 90  MLTSLGFTLEETNVLRGFCQS 110

Involved in the regulation of gamete interactions during the double fertilization and to prevent multiple-pollen tube attraction; mediates the redistribution of the gamete fusogen HAP2/GCS1 to the cell surface after secretion upon sperm arrival.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SRD8|EC11_ARATH Egg cell-secreted protein 1.1 OS=Arabidopsis thaliana GN=EC1.1 PE=2 SV=1

 Score = 62.4 bits (150), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 39/111 (35%), Positives = 56/111 (50%), Gaps = 6/111 (5%)

Query: 11  VVTLCLLAYASTATRTSY---DHKVNTPGYDLAARLQAYQGQFMECWNSLQALSSCSSLT 67
           +VTL L+  +ST T           ++P   L  RL+  +     CW+SL  L  CS   
Sbjct: 13  IVTLMLMVASSTVTARPLMKPSMGTSSPTTSLVYRLKLDEDTGY-CWDSLMQLQHCSGEL 71

Query: 68  VQFFLTGKADIA-SCCGSIDIIWSKCSWPSAVISLGYTPAEANILKTYCDA 117
           + FFL G+  I   CC +I  I  KC WP+ +  LG+T  E ++L+ YCD 
Sbjct: 72  ILFFLNGETYIGPGCCSAIRTIGRKC-WPTMIGVLGFTAQEGDMLQGYCDG 121

Involved in the regulation of gamete interactions during the double fertilization and to prevent multiple-pollen tube attraction; mediates the redistribution of the gamete fusogen HAP2/GCS1 to the cell surface after secretion upon sperm arrival.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FGG1|EC15_ARATH Egg cell-secreted protein 1.5 OS=Arabidopsis thaliana GN=EC1.5 PE=2 SV=1

 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 58/125 (46%), Gaps = 10/125 (8%)

Query: 1   MALKNVCLVLVVTLCLLAYASTATRTSYDHKVNTPGYDLAARLQAYQGQFMECWNSLQAL 60
           MA K+    L+++  +++Y  +        +  T  +   A   +  G  M+CWN+   L
Sbjct: 1   MATKSTSKPLLLSFLMMSYLISTFHVITVAEGRTLQFTKMATDHSGAGNLMDCWNAGLEL 60

Query: 61  SSCSSLTVQFFL--TGKAD-------IASCCGSIDIIWSKCSWPSAVISLGYTPAEANIL 111
            SC+   V+FFL  TG ++          CCG+I ++   C W     SLG T  E N L
Sbjct: 61  KSCTDEIVKFFLSQTGTSEPPVKGGIDKDCCGAIGLVVKDC-WSVMFTSLGLTTMEGNNL 119

Query: 112 KTYCD 116
           + YC+
Sbjct: 120 REYCE 124

Involved in the regulation of gamete interactions during the double fertilization and to prevent multiple-pollen tube attraction; mediates the redistribution of the gamete fusogen HAP2/GCS1 to the cell surface after secretion upon sperm arrival.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	127
296082551	135	unnamed protein product [Vitis vinifera]	0.866	0.814	0.448	2e-16
359482498	128	PREDICTED: uncharacterized protein LOC10	0.937	0.929	0.421	6e-16
224060465	146	predicted protein [Populus trichocarpa]	0.921	0.801	0.443	1e-15
116830619	128	unknown [Arabidopsis thaliana]	0.858	0.851	0.413	4e-15
15235039	127	uncharacterized protein [Arabidopsis tha	0.858	0.858	0.413	5e-15
297802032	127	hypothetical protein ARALYDRAFT_490711 [	0.779	0.779	0.424	5e-14
255578404	136	conserved hypothetical protein [Ricinus	0.889	0.830	0.385	3e-12
297825031	125	hypothetical protein ARALYDRAFT_900605 [	0.881	0.896	0.352	2e-11
116830473	126	unknown [Arabidopsis thaliana]	0.803	0.809	0.357	3e-11
15227092	125	uncharacterized protein [Arabidopsis tha	0.803	0.816	0.357	4e-11

>gi|296082551|emb|CBI21556.3| unnamed protein product [Vitis vinifera]

 Score = 90.1 bits (222), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 52/116 (44%), Positives = 70/116 (60%), Gaps = 6/116 (5%)

Query: 3   LKNVCLVLVVTLCLLAYASTATRTSYDHKVNTPGYDLAARLQAYQGQFMECWNSLQALSS 62
           +KNV   L+V L  L   ++A+R      +     DL ARL+   G  +ECWN+L  L S
Sbjct: 4   IKNV--FLLVALSWLITNASASR-ELPMSMKPAELDLVARLET-SGGLVECWNALVELKS 59

Query: 63  CSSLTVQFFLTGKADIA-SCCGSIDIIWSKCSWPSAVISLGYTPAEANILKTYCDA 117
           C++  + FFL G+ADI   CCG+IDII   C WP+ + SLG+T  E NIL+ YCDA
Sbjct: 60  CTNEIILFFLNGQADIGPDCCGAIDIITRNC-WPTMLTSLGFTAEEGNILRGYCDA 114

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359482498|ref|XP_002274398.2| PREDICTED: uncharacterized protein LOC100260034 [Vitis vinifera] gi|147772490|emb|CAN65099.1| hypothetical protein VITISV_039724 [Vitis vinifera] gi|297743029|emb|CBI35896.3| unnamed protein product [Vitis vinifera]

 Score = 89.0 bits (219), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 54/128 (42%), Positives = 71/128 (55%), Gaps = 9/128 (7%)

Query: 1   MALKNVCLVLVVTLCLLAYASTATRTSYDHKVNTPGYDLAARLQAYQGQFMECWNSLQAL 60
           MALK   L L+V L  L   + ATR   D   N PG DL  RL+   G  +ECWN+L  +
Sbjct: 1   MALKT--LFLLVALTWLMANAAATR---DLPTN-PGLDLTTRLET-SGGLVECWNALMEI 53

Query: 61  SSCSSLTVQFFLTGKADIA-SCCGSIDIIWSKCSWPSAVISLGYTPAEANILKTYCDAVS 119
             C++  + FFL G+  +   CC +I II   C WP+ + SLG+T  E NIL+ YC+A S
Sbjct: 54  RQCTNEIILFFLNGQTVLGPECCQAISIITRNC-WPAMLTSLGFTAEEGNILQGYCNASS 112

Query: 120 APPANRKP 127
            PP    P
Sbjct: 113 GPPTPASP 120

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224060465|ref|XP_002300213.1| predicted protein [Populus trichocarpa] gi|222847471|gb|EEE85018.1| predicted protein [Populus trichocarpa]

 Score = 87.8 bits (216), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 55/124 (44%), Positives = 76/124 (61%), Gaps = 7/124 (5%)

Query: 2   ALKNVCLVLVVTLCLLAYASTATRTSYDHKVNTPGYD-LAARLQAYQGQFMECWNSLQAL 60
           A KN+ L L +TL +    STA R   D  +N PG++ L+ARL+  +G  +ECWN+L  +
Sbjct: 3   AFKNLALFLSLTLLISTNISTAAR---DILINKPGFNSLSARLED-EGSLVECWNALVEI 58

Query: 61  SSCSSLTVQFFLTGKADIA-SCCGSIDIIWSKCSWPSAVISLGYTPAEANILKTYCDAVS 119
            SC++  V FF+TG+ADI   CC +I  I   C WP+   SLG+T  E NIL+ YCDA  
Sbjct: 59  KSCTNEIVLFFMTGQADIGPDCCRAIHTITHNC-WPAMFTSLGFTDEEGNILRGYCDASP 117

Query: 120 APPA 123
             P+
Sbjct: 118 NSPS 121

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|116830619|gb|ABK28267.1| unknown [Arabidopsis thaliana]

 Score = 85.9 bits (211), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 48/116 (41%), Positives = 70/116 (60%), Gaps = 7/116 (6%)

Query: 1   MALKNVCLVLVVTLCLLAYASTATRTSYDHKVNTPGYDLAARLQAYQGQFMECWNSLQAL 60
           MA     L   VTL ++   +T +      + +T   ++AARLQ+  G  MECWN+L  L
Sbjct: 1   MASNTTFLFSTVTLLIILLNTTVSGRDLPAESST---NIAARLQS--GGLMECWNALYEL 55

Query: 61  SSCSSLTVQFFLTGKADIA-SCCGSIDIIWSKCSWPSAVISLGYTPAEANILKTYC 115
            SC++  V FFL G+  +  SCC S+DII + C WP+ + SLG+TP EAN+L+ +C
Sbjct: 56  KSCTNEIVLFFLNGETKLGVSCCESVDIITTNC-WPAMLTSLGFTPEEANVLRGFC 110

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15235039|ref|NP_195644.1| uncharacterized protein [Arabidopsis thaliana] gi|75213705|sp|Q9T039.1|EC14_ARATH RecName: Full=Egg cell-secreted protein 1.4; Flags: Precursor gi|4914446|emb|CAB43649.1| hypothetical protein [Arabidopsis thaliana] gi|7270918|emb|CAB80597.1| hypothetical protein [Arabidopsis thaliana] gi|91805627|gb|ABE65542.1| hypothetical protein At4g39340 [Arabidopsis thaliana] gi|332661658|gb|AEE87058.1| uncharacterized protein [Arabidopsis thaliana]

 Score = 85.9 bits (211), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 48/116 (41%), Positives = 70/116 (60%), Gaps = 7/116 (6%)

Query: 1   MALKNVCLVLVVTLCLLAYASTATRTSYDHKVNTPGYDLAARLQAYQGQFMECWNSLQAL 60
           MA     L   VTL ++   +T +      + +T   ++AARLQ+  G  MECWN+L  L
Sbjct: 1   MASNTTFLFSTVTLLIILLNTTVSGRDLPAESST---NIAARLQS--GGLMECWNALYEL 55

Query: 61  SSCSSLTVQFFLTGKADIA-SCCGSIDIIWSKCSWPSAVISLGYTPAEANILKTYC 115
            SC++  V FFL G+  +  SCC S+DII + C WP+ + SLG+TP EAN+L+ +C
Sbjct: 56  KSCTNEIVLFFLNGETKLGVSCCESVDIITTNC-WPAMLTSLGFTPEEANVLRGFC 110

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297802032|ref|XP_002868900.1| hypothetical protein ARALYDRAFT_490711 [Arabidopsis lyrata subsp. lyrata] gi|297314736|gb|EFH45159.1| hypothetical protein ARALYDRAFT_490711 [Arabidopsis lyrata subsp. lyrata]

 Score = 82.4 bits (202), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 45/106 (42%), Positives = 66/106 (62%), Gaps = 7/106 (6%)

Query: 12  VTLCLLAYASTATRTSYDHKVNTPGYDLAARLQAYQGQFMECWNSLQALSSCSSLTVQFF 71
           VTL +L   +T +      + +T   ++AARLQ+  G  MECWN L  L SC++  V FF
Sbjct: 12  VTLLILFLNTTVSGRDLPAESST---NIAARLQS--GGLMECWNVLYELKSCTNEIVLFF 66

Query: 72  LTGKADIA-SCCGSIDIIWSKCSWPSAVISLGYTPAEANILKTYCD 116
           L G+  +  SCC ++DII + C WP+ + SLG+TP EAN+L+ +C 
Sbjct: 67  LNGETKLGVSCCEAVDIITTNC-WPAMLTSLGFTPEEANVLRGFCQ 111

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255578404|ref|XP_002530067.1| conserved hypothetical protein [Ricinus communis] gi|223530420|gb|EEF32307.1| conserved hypothetical protein [Ricinus communis]

 Score = 76.6 bits (187), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 47/122 (38%), Positives = 69/122 (56%), Gaps = 9/122 (7%)

Query: 1   MALKNVCLVLVVTLCLLAYASTATRTSYDHKVNTPGYDLAARLQ-AYQGQFMECWNSLQA 59
           MA K + L+L +TL ++A A+ A    +       G  L AR++ +     ++CWN+L  
Sbjct: 1   MAFKIMTLLLGLTL-VIASATAARDVPF-----ISGNSLEARIEGSSSSSLVDCWNALIE 54

Query: 60  LSSCSSLTVQFFLTGKADI-ASCCGSIDIIWSKCSWPSAVISLGYTPAEANILKTYCDAV 118
           + SCS+  + FFL G  DI A CC SI I    C WP+ + S+G+T  E NIL+ YCD  
Sbjct: 55  IKSCSNEIILFFLNGHTDIGADCCRSIAIFTHNC-WPAMLTSIGFTAEEGNILRGYCDNA 113

Query: 119 SA 120
           S+
Sbjct: 114 SS 115

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297825031|ref|XP_002880398.1| hypothetical protein ARALYDRAFT_900605 [Arabidopsis lyrata subsp. lyrata] gi|297326237|gb|EFH56657.1| hypothetical protein ARALYDRAFT_900605 [Arabidopsis lyrata subsp. lyrata]

 Score = 73.9 bits (180), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/119 (35%), Positives = 69/119 (57%), Gaps = 7/119 (5%)

Query: 10  LVVTLCLLAYASTATRTSYDHKVNTPGYDLAARLQAYQGQFMECWNSLQALSSCSSLTVQ 69
           L VT+ LL   + + RT     V     ++AARL    G  M+CW++L  L SC++  V 
Sbjct: 8   LFVTVTLLLALNVSGRT---LPVVADSTNIAARLTG--GGLMQCWDALYELKSCTNEIVL 62

Query: 70  FFLTGKADIAS-CCGSIDIIWSKCSWPSAVISLGYTPAEANILKTYCDAVSAPPANRKP 127
           FFL G+  + S CC ++D+I + C WP+ + SLG+T  E N+L+ +C + ++  ++  P
Sbjct: 63  FFLNGETKLGSGCCNAVDVITTDC-WPAMLTSLGFTSEETNVLRGFCQSPTSGGSSPAP 120

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|116830473|gb|ABK28194.1| unknown [Arabidopsis thaliana]

 Score = 73.2 bits (178), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 65/109 (59%), Gaps = 7/109 (6%)

Query: 10  LVVTLCLLAYASTATRTSYDHKVNTPGYDLAARLQAYQGQFMECWNSLQALSSCSSLTVQ 69
           L  T+ +L   + + RT  + + +T   ++AARL    G  MECWN+L  L SC++  V 
Sbjct: 8   LFATIAILLVLNISGRTLPETEDST---NIAARLNG--GGLMECWNALYELKSCTNEIVL 62

Query: 70  FFLTGKADIA-SCCGSIDIIWSKCSWPSAVISLGYTPAEANILKTYCDA 117
           FFL G+  +   CC ++++I + C WP+ + SLG+T  E N+L+ +C +
Sbjct: 63  FFLNGETKLGVDCCQAVEVITTDC-WPAMLTSLGFTSDETNVLRGFCQS 110

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15227092|ref|NP_179766.1| uncharacterized protein [Arabidopsis thaliana] gi|75206217|sp|Q9SJ24.1|EC12_ARATH RecName: Full=Egg cell-secreted protein 1.2; Flags: Precursor gi|4417269|gb|AAD20394.1| hypothetical protein [Arabidopsis thaliana] gi|91805455|gb|ABE65456.1| hypothetical protein At2g21740 [Arabidopsis thaliana] gi|330252124|gb|AEC07218.1| uncharacterized protein [Arabidopsis thaliana]

 Score = 73.2 bits (178), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 65/109 (59%), Gaps = 7/109 (6%)

Query: 10  LVVTLCLLAYASTATRTSYDHKVNTPGYDLAARLQAYQGQFMECWNSLQALSSCSSLTVQ 69
           L  T+ +L   + + RT  + + +T   ++AARL    G  MECWN+L  L SC++  V 
Sbjct: 8   LFATIAILLVLNISGRTLPETEDST---NIAARLNG--GGLMECWNALYELKSCTNEIVL 62

Query: 70  FFLTGKADIA-SCCGSIDIIWSKCSWPSAVISLGYTPAEANILKTYCDA 117
           FFL G+  +   CC ++++I + C WP+ + SLG+T  E N+L+ +C +
Sbjct: 63  FFLNGETKLGVDCCQAVEVITTDC-WPAMLTSLGFTSDETNVLRGFCQS 110

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	127
TAIR|locus:2136293	127	EC1.4 "AT4G39340" [Arabidopsis	0.685	0.685	0.450	3.2e-17
TAIR|locus:2052536	125	EC1.2 "AT2G21740" [Arabidopsis	0.685	0.696	0.373	4.9e-14
TAIR|locus:2052556	125	EC1.3 "AT2G21750" [Arabidopsis	0.606	0.616	0.395	2.1e-13
TAIR|locus:2030136	158	EC1.1 "AT1G76750" [Arabidopsis	0.496	0.398	0.430	3.2e-10
TAIR|locus:2176080	155	EC1.5 "AT5G64720" [Arabidopsis	0.535	0.438	0.397	2e-08
TAIR|locus:504954909	207	AT5G54062 "AT5G54062" [Arabido	0.637	0.391	0.306	0.00042

TAIR|locus:2136293 EC1.4 "AT4G39340" [Arabidopsis thaliana (taxid:3702)]

 Score = 211 (79.3 bits), Expect = 3.2e-17, P = 3.2e-17
 Identities = 41/91 (45%), Positives = 61/91 (67%)

Query:    38 DLAARLQAYQGQFMECWNSLQALSSCSSLTVQFFLTGKADIA-SCCGSIDIIWSKCSWPS 96
             ++AARLQ+  G  MECWN+L  L SC++  V FFL G+  +  SCC S+DII + C WP+
Sbjct:    35 NIAARLQS--GGLMECWNALYELKSCTNEIVLFFLNGETKLGVSCCESVDIITTNC-WPA 91

Query:    97 AVISLGYTPAEANILKTYCDAVSAPPANRKP 127
              + SLG+TP EAN+L+ +C   ++  ++  P
Sbjct:    92 MLTSLGFTPEEANVLRGFCQNPNSGDSSPAP 122

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IDA

GO:0009567 "double fertilization forming a zygote and endosperm" evidence=IGI

GO:0031982 "vesicle" evidence=IDA

GO:0080155 "regulation of double fertilization forming a zygote and endosperm" evidence=IMP

GO:2000008 "regulation of protein localization to cell surface" evidence=IMP

TAIR|locus:2052536 EC1.2 "AT2G21740" [Arabidopsis thaliana (taxid:3702)]

 Score = 181 (68.8 bits), Expect = 4.9e-14, P = 4.9e-14
 Identities = 34/91 (37%), Positives = 57/91 (62%)

Query:    38 DLAARLQAYQGQFMECWNSLQALSSCSSLTVQFFLTGKADIA-SCCGSIDIIWSKCSWPS 96
             ++AARL    G  MECWN+L  L SC++  V FFL G+  +   CC ++++I + C WP+
Sbjct:    33 NIAARLNG--GGLMECWNALYELKSCTNEIVLFFLNGETKLGVDCCQAVEVITTDC-WPA 89

Query:    97 AVISLGYTPAEANILKTYCDAVSAPPANRKP 127
              + SLG+T  E N+L+ +C + ++  ++  P
Sbjct:    90 MLTSLGFTSDETNVLRGFCQSPNSGGSSPAP 120

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IDA

GO:0009567 "double fertilization forming a zygote and endosperm" evidence=IGI

GO:0031982 "vesicle" evidence=IDA

GO:0080155 "regulation of double fertilization forming a zygote and endosperm" evidence=IMP

GO:2000008 "regulation of protein localization to cell surface" evidence=IMP

TAIR|locus:2052556 EC1.3 "AT2G21750" [Arabidopsis thaliana (taxid:3702)]

 Score = 175 (66.7 bits), Expect = 2.1e-13, P = 2.1e-13
 Identities = 32/81 (39%), Positives = 52/81 (64%)

Query:    38 DLAARLQAYQGQFMECWNSLQALSSCSSLTVQFFLTGKADIA-SCCGSIDIIWSKCSWPS 96
             ++AARL    G  M+CW++L  L SC++  V FFL G+  +   CC ++D+I + C WP+
Sbjct:    33 NIAARLTG--GGLMQCWDALYELKSCTNEIVLFFLNGETKLGYGCCNAVDVITTDC-WPA 89

Query:    97 AVISLGYTPAEANILKTYCDA 117
              + SLG+T  E N+L+ +C +
Sbjct:    90 MLTSLGFTLEETNVLRGFCQS 110

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IDA

GO:0009567 "double fertilization forming a zygote and endosperm" evidence=IGI

GO:0031982 "vesicle" evidence=IDA

GO:0080155 "regulation of double fertilization forming a zygote and endosperm" evidence=IMP

GO:2000008 "regulation of protein localization to cell surface" evidence=IMP

TAIR|locus:2030136 EC1.1 "AT1G76750" [Arabidopsis thaliana (taxid:3702)]

 Score = 145 (56.1 bits), Expect = 3.2e-10, P = 3.2e-10
 Identities = 28/65 (43%), Positives = 38/65 (58%)

Query:    53 CWNSLQALSSCSSLTVQFFLTGKADIA-SCCGSIDIIWSKCSWPSAVISLGYTPAEANIL 111
             CW+SL  L  CS   + FFL G+  I   CC +I  I  KC WP+ +  LG+T  E ++L
Sbjct:    57 CWDSLMQLQHCSGELILFFLNGETYIGPGCCSAIRTIGRKC-WPTMIGVLGFTAQEGDML 115

Query:   112 KTYCD 116
             + YCD
Sbjct:   116 QGYCD 120

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IDA

GO:0005622 "intracellular" evidence=IDA

GO:0009567 "double fertilization forming a zygote and endosperm" evidence=IGI

GO:0031982 "vesicle" evidence=IDA

GO:0048240 "sperm capacitation" evidence=IDA

GO:0080155 "regulation of double fertilization forming a zygote and endosperm" evidence=IMP

GO:2000008 "regulation of protein localization to cell surface" evidence=IMP

TAIR|locus:2176080 EC1.5 "AT5G64720" [Arabidopsis thaliana (taxid:3702)]

 Score = 128 (50.1 bits), Expect = 2.0e-08, P = 2.0e-08
 Identities = 31/78 (39%), Positives = 40/78 (51%)

Query:    48 GQFMECWNSLQALSSCSSLTVQFFL--TG------KADI-ASCCGSIDIIWSKCSWPSAV 98
             G  M+CWN+   L SC+   V+FFL  TG      K  I   CCG+I ++   C W    
Sbjct:    48 GNLMDCWNAGLELKSCTDEIVKFFLSQTGTSEPPVKGGIDKDCCGAIGLVVKDC-WSVMF 106

Query:    99 ISLGYTPAEANILKTYCD 116
              SLG T  E N L+ YC+
Sbjct:   107 TSLGLTTMEGNNLREYCE 124

GO:0003674 "molecular_function" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0005576 "extracellular region" evidence=IDA

GO:0009567 "double fertilization forming a zygote and endosperm" evidence=IGI

GO:0031982 "vesicle" evidence=IDA

GO:0080155 "regulation of double fertilization forming a zygote and endosperm" evidence=IMP

GO:2000008 "regulation of protein localization to cell surface" evidence=IMP

TAIR|locus:504954909 AT5G54062 "AT5G54062" [Arabidopsis thaliana (taxid:3702)]

 Score = 91 (37.1 bits), Expect = 0.00042, P = 0.00042
 Identities = 27/88 (30%), Positives = 42/88 (47%)

Query:    43 LQAYQGQFMECWNSLQALSSCSSLTVQFFLTGKAD-IAS-CCGSIDIIWSKCSWPSAVIS 100
             L   Q    +CW+SL  +  C+    +  LTGK + + S CC +   + +KC WP  +  
Sbjct:    38 LPGSQVDLAKCWSSLLNIHGCNIEIFKSVLTGKFENVGSTCCKAFTEVDAKC-WPK-MFP 95

Query:   101 LGYTPAEANILKTYCDAV-SAPPANRKP 127
             L   P    +LK  C  + S  PA++ P
Sbjct:    96 LN--PLFPPLLKDGCSRIISGAPAHKTP 121


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.127   0.404    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      127       115   0.00091  102 3  11 22  0.46    30
                                                     29  0.45    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  6
  No. of states in DFA:  596 (63 KB)
  Total size of DFA:  138 KB (2084 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  11.12u 0.15s 11.27t   Elapsed:  00:00:01
  Total cpu time:  11.12u 0.15s 11.27t   Elapsed:  00:00:01
  Start:  Thu May  9 17:19:03 2013   End:  Thu May  9 17:19:04 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9T039	EC14_ARATH	No assigned EC number	0.4137	0.8582	0.8582	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: gw1.I.3747.1 hypothetical protein (111 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	127
PLN00213	118	predicted protein; Provisional	99.91
PF05617	70	Prolamin_like: Prolamin-like; InterPro: IPR008502	99.79
PF07172	95	GRP: Glycine rich protein family; InterPro: IPR010	96.01

>PLN00213 predicted protein; Provisional

Probab=99.91  E-value=1.7e-24  Score=161.93  Aligned_cols=112  Identities=21%  Similarity=0.390  Sum_probs=82.4

Q ss_pred             CcchhHHHHHHHHHHHHHHhhhccC-ccccCCCCCCCcchHHHHhhccCChhhhhHhhhcccchHHHHHHHHHhCccc-c
Q 039915            1 MALKNVCLVLVVTLCLLAYASTATR-TSYDHKVNTPGYDLAARLQAYQGQFMECWNSLQALSSCSSLTVQFFLTGKAD-I   78 (127)
Q Consensus         1 MA~~~~~l~~~~tl~ll~~~~~a~r-~~~~~~~~~~~~~l~~rL~~~~~~~~~CW~sL~~l~sCt~EIv~fflnGe~~-i   78 (127)
                      |..|+++.+++++-   ++.++..+ +...++...+.. . .++.+ -.|..+||+||++++||..||.+++++||++ |
T Consensus         1 m~iknV~~ll~v~c---IvvsVna~lpqf~~~fp~~~p-~-~~~pg-~pd~~kCwSSl~~vpGCv~EI~~si~~gkf~~I   74 (118)
T PLN00213          1 MSIKNVFLLLAVLC---IIVSVNAQLPQFPAQLPFLFP-F-QLIPG-LPDITKCFSSVMDIPGCIAEISQSIFTGKFGNL   74 (118)
T ss_pred             CchHHHHHHHHHHH---HHheeccCCCCCCCCCCCCCC-c-cCCCC-CccHHHHHHHHcCCcchHHHHHHHHHhchhccc
Confidence            78899877766542   23333333 222223321111 1 33443 3589999999999999999999999999996 9


Q ss_pred             h-hhhHHHHHhhhcCCCchhhhcCCCCchhhhHHHhhhhccCCCCCC
Q 039915           79 A-SCCGSIDIIWSKCSWPSAVISLGYTPAEANILKTYCDAVSAPPAN  124 (127)
Q Consensus        79 G-~CC~AI~~I~~~C~WP~M~~slgfT~eE~~iLkgyCd~~a~~pa~  124 (127)
                      | +||+||...+ +| ||+| |.++|+|.   +||+.|.+.+.+++.
T Consensus        75 g~aCCKAf~~~d-nC-wP~~-P~~P~fPp---~LK~~Cs~i~~~~~~  115 (118)
T PLN00213         75 GPACCKAFLDAD-NC-IPKI-PFIPFFPP---MLKEQCSRVAGATPP  115 (118)
T ss_pred             chHHHHHHHhhh-cc-ccCC-cCCCccch---HHHHHHhcccCCCCC
Confidence            9 9999999966 99 9995 99999885   999999998666553

>PF05617 Prolamin_like: Prolamin-like; InterPro: IPR008502 This entry consists of several proteins of unknown function found exclusively in Arabidopsis thaliana

Probab=99.79  E-value=6.5e-20  Score=120.75  Aligned_cols=64  Identities=23%  Similarity=0.546  Sum_probs=59.6

Q ss_pred             hhhHhhhcccchHHHHHHHHHhCc-ccch-hhhHHHHHhhhcCCCchhhhcCCCCchhhh----HHHhhhh
Q 039915           52 ECWNSLQALSSCSSLTVQFFLTGK-ADIA-SCCGSIDIIWSKCSWPSAVISLGYTPAEAN----ILKTYCD  116 (127)
Q Consensus        52 ~CW~sL~~l~sCt~EIv~fflnGe-~~iG-~CC~AI~~I~~~C~WP~M~~slgfT~eE~~----iLkgyCd  116 (127)
                      +||+++.++++|+.||+.+|++|+ ..|| +||++|+.++++| ||.|+..++++|++.+    .|+++|+
T Consensus         1 kc~~~~~~~~~C~~eI~~~~~~g~~~~i~~~CC~~i~~~g~~C-~~~l~~~~~~~p~~~~~~r~~l~~~C~   70 (70)
T PF05617_consen    1 KCLSSCAKSPGCGDEIFNSFFNGNKKNIGPECCKAINKMGKDC-HPALFKMFPFTPFFKPLLRDLLWNHCS   70 (70)
T ss_pred             ChHHHcCCccchHHHHHHHHHcCCCCCCChHHHHHHHHHhHhH-HHHHHHHccCCCCccchhHHHHHhhcC
Confidence            699999999999999999999999 6799 9999999999999 9997777778888888    9999996

>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins

Probab=96.01  E-value=0.0048  Score=44.42  Aligned_cols=27  Identities=33%  Similarity=0.303  Sum_probs=20.2

Q ss_pred             CcchhHHH-HHHHHHHHHHHhhhccCcc
Q 039915            1 MALKNVCL-VLVVTLCLLAYASTATRTS   27 (127)
Q Consensus         1 MA~~~~~l-~~~~tl~ll~~~~~a~r~~   27 (127)
                      ||||..+| .++|+++|||+|.++.|++
T Consensus         1 MaSK~~llL~l~LA~lLlisSevaa~~~   28 (95)
T PF07172_consen    1 MASKAFLLLGLLLAALLLISSEVAAREL   28 (95)
T ss_pred             CchhHHHHHHHHHHHHHHHHhhhhhHHh
Confidence            99887443 3446677888898888887

Some of them may be involved in resistance to environmental stress [].

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00