Citrus Sinensis ID: 039981

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310---
MFGASNAQLSSTFYATTCPNVSSIVRGVVEQARNNDARIGARLIRVHFHDCFVNGCDGSLLLDDSAPGGIQSEKNGNPNLSTGGYEVVDDIKTALENVCPGVVSCADILAIASQILVSLDGGPTWQVQLGRRDSRTANLAGTSGIPLGNETLDRISEKFRAVGLDDPTDLVALSGAHTFGRARCVAFRNRLFNFDGAGNPDPTIDPTYLQTLRQNCPQGGNGNALVDLDPTTADGFDNNYFTNLQNNRGLLTSDQVLFSTTGAKTVAIVNRFANSQTDFFDTFGQAMIKMGNIRPLTGNNGEIRSNCRRINSN
ccccccccccccccccccccHHHHHHHHHHHHHHHcccccHHHHHHcccccccccccHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHcccccccccccccccccccHHHccccccccccHHHHHHHHHHccccccccEEEEccccccccccccccHHHHccccccccccccccHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHccccccccHHHHccccccHHHHHHHHHccHHHHHHHHHHHHHHHccccccccccccccccccccccc
cccccccccEccccccccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHccccccHHHccccccccccccccHHHcccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHccccccccccEcccEcccccHHHHHHcccccccHHHHHHHHHccccccHHHHHHHHHHHHccEEEHHHcHHHcccHHHcccccccccHHHHHHHHHHcccccccccEEEcccccccccccHHHHHHHccccccHHHHHHHHcccccHHHHHHHHHHcHHHHHHHHHHHHHHHHccccEcccccEccccccccccc
mfgasnaqlsstfyattcpnvsSIVRGVVEQARNNDARIGARLIRVHFHdcfvngcdgslllddsapggiqsekngnpnlstggyeVVDDIKTALenvcpgvvSCADILAIASQILVsldggptwqvqlgrrdsrtanlagtsgiplgneTLDRISEKFRavglddptdlvalsgahtfgRARCVAFRNRlfnfdgagnpdptidptylqtlrqncpqggngnalvdldpttadgfdnnyftnlqnnrglltsdqvlfsttGAKTVAIVNRFANSQTDFFDTFGQAMIkmgnirpltgnngeirsncrrinsn
MFGASNAQLSSTFYATTCPNVSSIVRGVVEQARNNDARIGARLIRVHFHDCFVNGCDGSLLLDDSAPGGIQsekngnpnlstGGYEVVDDIKTALENVCPGVVSCADILAIASQILVSLDGGPTWQVQlgrrdsrtanlagtsgiplgnetLDRISEKFRAVGLDDPTDLVALSGAHTFGRARCVAFRNRLFNFDGAGNPDPTIDPTYLQTLRQNCPQGGNGNALVDLDPTTADGFDNNYFTNLQNNRGLLTSDQVLFSTTGAKTVAIVNRFANSQTDFFDTFGQAMIKMgnirpltgnngeirsncrrinsn
MFGASNAQLSSTFYATTCPNVSSIVRGVVEQARNNDARIGARLIRVHFHDCFVNGCDGSLLLDDSAPGGIQSEKNGNPNLSTGGYEVVDDIKTALENVCPGVVSCADILAIASQILVSLDGGPTWQVQLGRRDSRTANLAGTSGIPLGNETLDRISEKFRAVGLDDPTDLVALSGAHTFGRARCVAFRNRLFNFDGAGNPDPTIDPTYLQTLRQNCPQGGNGNALVDLDPTTADGFDNNYFTNLQNNRGLLTSDQVLFSTTGAKTVAIVNRFANSQTDFFDTFGQAMIKMGNIRPLTGNNGEIRSNCRRINSN
***********TFYATTCPNVSSIVRGVVEQARNNDARIGARLIRVHFHDCFVNGCDGSLLLD******************TGGYEVVDDIKTALENVCPGVVSCADILAIASQILVSLDGGPTWQVQLGRR****ANLAGTSGIPLGNETLDRISEKFRAVGLDDPTDLVALSGAHTFGRARCVAFRNRLFNFDGAGNPDPTIDPTYLQTLRQNCPQGGNGNALVDLDPTTADGFDNNYFTNLQNNRGLLTSDQVLFSTTGAKTVAIVNRFANSQTDFFDTFGQAMIKMGNIRPL*****************
****SNAQLSSTFYATTCPNVSSIVRGVVEQARNNDARIGARLIRVHFHDCFVNGCDGSLLLDDSAP******K**NPNLSTGGYEVVDDIKTALENVCPGVVSCADILAIASQILVSLDGGPTWQVQLGRRDSRTANLAGTSGIPLGNETLDRISEKFRAVGLDDPTDLVALSGAHTFGRARCVAFRNRLFNFDGAGNPDPTIDPTYLQTLRQNCP**GNGNALVDLDPTTADGFDNNYFTNLQNNRGLLTSDQVLFSTTGAKTVAIVNRFANSQTDFFDTFGQAMIKMGNIRPLTGNNGEIRSNCRRI***
********LSSTFYATTCPNVSSIVRGVVEQARNNDARIGARLIRVHFHDCFVNGCDGSLLLDDSAPGGIQSEKNGNPNLSTGGYEVVDDIKTALENVCPGVVSCADILAIASQILVSLDGGPTWQVQLGRRDSRTANLAGTSGIPLGNETLDRISEKFRAVGLDDPTDLVALSGAHTFGRARCVAFRNRLFNFDGAGNPDPTIDPTYLQTLRQNCPQGGNGNALVDLDPTTADGFDNNYFTNLQNNRGLLTSDQVLFSTTGAKTVAIVNRFANSQTDFFDTFGQAMIKMGNIRPLTGNNGEIRSNCRRINSN
*****NAQLSSTFYATTCPNVSSIVRGVVEQARNNDARIGARLIRVHFHDCFVNGCDGSLLLDDSAPGGIQSEKNGNPNLSTGGYEVVDDIKTALENVCPGVVSCADILAIASQILVSLDGGPTWQVQLGRRDSRTANLAGTSGIPLGNETLDRISEKFRAVGLDDPTDLVALSGAHTFGRARCVAFRNRLFNFDGAGNPDPTIDPTYLQTLRQNCPQGGNGNALVDLDPTTADGFDNNYFTNLQNNRGLLTSDQVLFSTTGAKTVAIVNRFANSQTDFFDTFGQAMIKMGNIRPLTGNNGEIRSNCRR****
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MFGASNAQLSSTFYATTCPNVSSIVRGVVEQARNNDARIGARLIRVHFHDCFVNGCDGSLLLDDSAPGGIQSEKNGNPNLSTGGYEVVDDIKTALENVCPGVVSCADILAIASQILVSLDGGPTWQVQLGRRDSRTANLAGTSGIPLGNETLDRISEKFRAVGLDDPTDLVALSGAHTFGRARCVAFRNRLFNFDGAGNPDPTIDPTYLQTLRQNCPQGGNGNALVDLDPTTADGFDNNYFTNLQNNRGLLTSDQVLFSTTGAKTVAIVNRFANSQTDFFDTFGQAMIKMGNIRPLTGNNGEIRSNCRRINSN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query313 2.2.26 [Sep-21-2011]
Q42578335 Peroxidase 53 OS=Arabidop yes no 0.984 0.919 0.642 1e-112
Q9LEH3327 Peroxidase 15 OS=Ipomoea N/A no 0.974 0.932 0.669 1e-111
P11965324 Lignin-forming anionic pe N/A no 0.980 0.947 0.645 1e-111
Q9FG34358 Peroxidase 54 OS=Arabidop no no 0.984 0.860 0.632 1e-110
P59120329 Peroxidase 58 OS=Arabidop no no 0.990 0.942 0.606 1e-106
P80679305 Peroxidase A2 OS=Armoraci N/A no 0.961 0.986 0.627 1e-106
P19135292 Peroxidase 2 (Fragment) O N/A no 0.929 0.996 0.601 6e-93
P59121306 Peroxidase E5 OS=Armoraci N/A no 0.964 0.986 0.532 4e-89
P17180349 Peroxidase C3 OS=Armoraci N/A no 0.974 0.873 0.536 7e-88
P24102349 Peroxidase 22 OS=Arabidop no no 0.974 0.873 0.527 4e-87
>sp|Q42578|PER53_ARATH Peroxidase 53 OS=Arabidopsis thaliana GN=PER53 PE=1 SV=1 Back     alignment and function desciption
 Score =  406 bits (1043), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 201/313 (64%), Positives = 245/313 (78%), Gaps = 5/313 (1%)

Query: 1   MFGASNAQLSSTFYATTCPNVSSIVRGVVEQARNNDARIGARLIRVHFHDCFVNGCDGSL 60
           +FG S+AQL++TFY+ TCPN S+IVR  ++QA  +D RIGA LIR+HFHDCFVNGCD S+
Sbjct: 24  IFGTSSAQLNATFYSGTCPNASAIVRSTIQQALQSDTRIGASLIRLHFHDCFVNGCDASI 83

Query: 61  LLDDSAPGGIQSEKNGNPNLSTG-GYEVVDDIKTALENVCPGVVSCADILAIASQILVSL 119
           LLDD+  G IQSEKN  PN+++  G+ VVD+IKTALEN CPGVVSC+D+LA+AS+  VSL
Sbjct: 84  LLDDT--GSIQSEKNAGPNVNSARGFNVVDNIKTALENACPGVVSCSDVLALASEASVSL 141

Query: 120 DGGPTWQVQLGRRDSRTANLAGT-SGIPLGNETLDRISEKFRAVGLDDPTDLVALSGAHT 178
            GGP+W V LGRRDS TANLAG  S IP   E+L  I+ KF AVGL+   DLVALSGAHT
Sbjct: 142 AGGPSWTVLLGRRDSLTANLAGANSSIPSPIESLSNITFKFSAVGLNT-NDLVALSGAHT 200

Query: 179 FGRARCVAFRNRLFNFDGAGNPDPTIDPTYLQTLRQNCPQGGNGNALVDLDPTTADGFDN 238
           FGRARC  F NRLFNF G GNPDPT++ T L TL+Q CPQ G+ + + +LD +T D FDN
Sbjct: 201 FGRARCGVFNNRLFNFSGTGNPDPTLNSTLLSTLQQLCPQNGSASTITNLDLSTPDAFDN 260

Query: 239 NYFTNLQNNRGLLTSDQVLFSTTGAKTVAIVNRFANSQTDFFDTFGQAMIKMGNIRPLTG 298
           NYF NLQ+N GLL SDQ LFSTTG+ T+AIV  FA++QT FF  F Q+MI MGNI PLTG
Sbjct: 261 NYFANLQSNDGLLQSDQELFSTTGSSTIAIVTSFASNQTLFFQAFAQSMINMGNISPLTG 320

Query: 299 NNGEIRSNCRRIN 311
           +NGEIR +C+++N
Sbjct: 321 SNGEIRLDCKKVN 333
Closely linked to lignin formation by showing monolignol substrate specificity.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: 1EC: .EC: 1EC: .EC: 7
>sp|Q9LEH3|PER15_IPOBA Peroxidase 15 OS=Ipomoea batatas GN=pod PE=1 SV=1 Back     alignment and function description
>sp|P11965|PERX_TOBAC Lignin-forming anionic peroxidase OS=Nicotiana tabacum PE=2 SV=1 Back     alignment and function description
>sp|Q9FG34|PER54_ARATH Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=2 SV=1 Back     alignment and function description
>sp|P59120|PER58_ARATH Peroxidase 58 OS=Arabidopsis thaliana GN=PER58 PE=2 SV=1 Back     alignment and function description
>sp|P80679|PERA2_ARMRU Peroxidase A2 OS=Armoracia rusticana GN=HRPA2 PE=1 SV=1 Back     alignment and function description
>sp|P19135|PER2_CUCSA Peroxidase 2 (Fragment) OS=Cucumis sativus PE=2 SV=1 Back     alignment and function description
>sp|P59121|PERE5_ARMRU Peroxidase E5 OS=Armoracia rusticana GN=HRPE5 PE=1 SV=1 Back     alignment and function description
>sp|P17180|PER3_ARMRU Peroxidase C3 OS=Armoracia rusticana GN=PRXC3 PE=3 SV=1 Back     alignment and function description
>sp|P24102|PER22_ARATH Peroxidase 22 OS=Arabidopsis thaliana GN=PER22 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query313
478389318 peroxidase (EC 1.11.1.7) precursor, anio 0.971 0.955 0.700 1e-119
225435628326 PREDICTED: lignin-forming anionic peroxi 0.980 0.941 0.679 1e-119
224057152318 predicted protein [Populus trichocarpa] 0.971 0.955 0.697 1e-118
115345282310 peroxidase [Populus alba] 0.971 0.980 0.694 1e-117
350539341325 peroxidase precursor [Solanum lycopersic 0.984 0.947 0.654 1e-112
6723685325 peroxidase [Solanum lycopersicum] 0.984 0.947 0.651 1e-112
21593262335 peroxidase [Arabidopsis thaliana] gi|424 0.984 0.919 0.642 1e-111
15240140335 peroxidase 53 [Arabidopsis thaliana] gi| 0.984 0.919 0.642 1e-111
426262459336 horseradish peroxidase isoenzyme HRP_A2A 0.984 0.916 0.642 1e-111
218308322 peroxidase [Nicotiana tabacum] 0.974 0.947 0.658 1e-110
>gi|478389|pir||JQ2217 peroxidase (EC 1.11.1.7) precursor, anionic - Japanese aspen x large-toothed aspen gi|217997|dbj|BAA01877.1| peroxidase [Populus kitakamiensis] gi|444801|prf||1908234A anionic peroxidase Back     alignment and taxonomy information
 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 218/311 (70%), Positives = 253/311 (81%), Gaps = 7/311 (2%)

Query: 1   MFGASNAQLSSTFYATTCPNVSSIVRGVVEQARNNDARIGARLIRVHFHDCFVNGCDGSL 60
            +G S+AQLS TFYA+TCPNVSSIVRGVVEQA  ND R+GA+LIR+HFHDCFV+GCDGS+
Sbjct: 15  FWGISDAQLSPTFYASTCPNVSSIVRGVVEQAAQNDVRLGAKLIRMHFHDCFVDGCDGSI 74

Query: 61  LLDDSAPGGIQSEKNGNPNLSTGGYEVVDDIKTALENVCPGVVSCADILAIASQILVSLD 120
           LL D+   GI SE++  PN S  GY VVDDIKTA+ENVCPG+VSCADILA+AS+ILV+L 
Sbjct: 75  LLVDAT--GINSEQDEAPNTSVEGYGVVDDIKTAVENVCPGIVSCADILALASEILVTLA 132

Query: 121 GGPTWQVQLGRRDSRTANLAGTSGIPLGNETLDRISEKFRAVGLDDPTDLVALSGAHTFG 180
           GGPTWQV LGRRDS TAN A TS IP   ET + +S KF    LD  TDLVALSGAHTFG
Sbjct: 133 GGPTWQVPLGRRDSTTANAARTSDIPSPFETFENLSLKFSNKELDS-TDLVALSGAHTFG 191

Query: 181 RARCVAFRNRLFNFDGAGNPDPTIDPTYLQTLRQNCPQGGNGNALVDLDPTTADGFDNNY 240
           R++C  F  RL       NPDPT++PTYLQTLRQ CPQGGN + L +LDPTT D FDNNY
Sbjct: 192 RSQCQFFSQRL----NDTNPDPTLNPTYLQTLRQACPQGGNPSRLNNLDPTTPDDFDNNY 247

Query: 241 FTNLQNNRGLLTSDQVLFSTTGAKTVAIVNRFANSQTDFFDTFGQAMIKMGNIRPLTGNN 300
           FTNLQNN GLL +DQ+LFST+GA TVAIVNRFANSQT FFD+F Q+MIKMGN+ PLTG+N
Sbjct: 248 FTNLQNNSGLLATDQMLFSTSGADTVAIVNRFANSQTAFFDSFAQSMIKMGNLSPLTGSN 307

Query: 301 GEIRSNCRRIN 311
           GEIR++C+R+N
Sbjct: 308 GEIRADCKRVN 318

Source: Populus kitakamiensis

Species: Populus sieboldii x Populus grandidentata

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225435628|ref|XP_002285649.1| PREDICTED: lignin-forming anionic peroxidase [Vitis vinifera] gi|147845468|emb|CAN78501.1| hypothetical protein VITISV_002523 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224057152|ref|XP_002299145.1| predicted protein [Populus trichocarpa] gi|222846403|gb|EEE83950.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|115345282|dbj|BAF33317.1| peroxidase [Populus alba] Back     alignment and taxonomy information
>gi|350539341|ref|NP_001234132.1| peroxidase precursor [Solanum lycopersicum] gi|296910|emb|CAA50597.1| peroxidase [Solanum lycopersicum] Back     alignment and taxonomy information
>gi|6723685|emb|CAB67121.1| peroxidase [Solanum lycopersicum] Back     alignment and taxonomy information
>gi|21593262|gb|AAM65211.1| peroxidase [Arabidopsis thaliana] gi|42494611|gb|AAS17636.1| peroxidase ATPA2 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|15240140|ref|NP_196290.1| peroxidase 53 [Arabidopsis thaliana] gi|26397635|sp|Q42578.1|PER53_ARATH RecName: Full=Peroxidase 53; Short=Atperox P53; AltName: Full=ATPA2; Flags: Precursor gi|1491617|emb|CAA68212.1| peroxidase [Arabidopsis thaliana] gi|9759300|dbj|BAB09806.1| peroxidase [Arabidopsis thaliana] gi|15810295|gb|AAL07035.1| putative peroxidase [Arabidopsis thaliana] gi|20466025|gb|AAM20347.1| putative peroxidase [Arabidopsis thaliana] gi|332003672|gb|AED91055.1| peroxidase 53 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|426262459|emb|CCJ34825.1| horseradish peroxidase isoenzyme HRP_A2A [Armoracia rusticana] Back     alignment and taxonomy information
>gi|218308|dbj|BAA01992.1| peroxidase [Nicotiana tabacum] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query313
UNIPROTKB|Q9LEH3327 pod "Peroxidase 15" [Ipomoea b 0.974 0.932 0.669 1.4e-105
TAIR|locus:2170204335 PA2 "peroxidase 2" [Arabidopsi 0.990 0.925 0.638 1.7e-105
TAIR|locus:2170214358 AT5G06730 [Arabidopsis thalian 0.984 0.860 0.632 6e-103
TAIR|locus:2147630329 AT5G19880 [Arabidopsis thalian 0.990 0.942 0.606 1.7e-100
TAIR|locus:2057180349 AT2G38380 [Arabidopsis thalian 0.974 0.873 0.524 2.8e-82
TAIR|locus:2057165349 AT2G38390 [Arabidopsis thalian 0.974 0.873 0.514 2e-81
TAIR|locus:2053129338 AT2G18150 [Arabidopsis thalian 0.984 0.911 0.515 3.2e-81
TAIR|locus:2115335331 AT4G36430 [Arabidopsis thalian 0.945 0.894 0.536 6.6e-81
TAIR|locus:2097273352 AT3G32980 [Arabidopsis thalian 0.980 0.872 0.5 2e-79
TAIR|locus:2101298354 PRXCA "peroxidase CA" [Arabido 0.984 0.870 0.498 1.4e-78
UNIPROTKB|Q9LEH3 pod "Peroxidase 15" [Ipomoea batatas (taxid:4120)] Back     alignment and assigned GO terms
 Score = 1045 (372.9 bits), Expect = 1.4e-105, P = 1.4e-105
 Identities = 207/309 (66%), Positives = 244/309 (78%)

Query:     5 SNAQLSSTFYATTCPNVSSIVRGVVEQARNNDARIGARLIRVHFHDCFVNGCDGSLLLDD 64
             SNAQLSSTFY+TTCPNVS+IVR VV+QA  NDARIG  LIR+HFHDCFV+GCDGSLLLD+
Sbjct:    21 SNAQLSSTFYSTTCPNVSAIVRTVVQQALQNDARIGGSLIRLHFHDCFVDGCDGSLLLDN 80

Query:    65 SAPGGIQSEKNGNPNL-STGGYEVVDDIKTALENVCPGVVSCADILAIASQILVSLDGGP 123
             +    I SEK+  PN  ST G++VVD+IKTA+EN CPGVVSC DILA+AS+  VSL GGP
Sbjct:    81 NGTT-IVSEKDALPNTNSTRGFDVVDNIKTAVENACPGVVSCVDILALASESSVSLAGGP 139

Query:   124 TWQVQLGRRDSRTANLAGTS-GIPLGNETLDRISEKFRAVGLDDPTDLVALSGAHTFGRA 182
             +W V LGRRD RTAN  G +  +P   E L  +++KF  VGL+   DLVALSGAHTFGRA
Sbjct:   140 SWNVLLGRRDRRTANQGGANTSLPSPFENLTNLTQKFTNVGLN-VNDLVALSGAHTFGRA 198

Query:   183 RCVAFRNRLFNFDGAGNPDPTIDPTYLQTLRQNCPQGGNGNALVDLDPTTADGFDNNYFT 242
             +C  F  RLFNF   GNPDPT++ TYL TL+Q CPQGG+G  + +LDPTT D FDNNYF+
Sbjct:   199 QCRTFSPRLFNFSNTGNPDPTLNTTYLATLQQICPQGGSGFTVTNLDPTTPDTFDNNYFS 258

Query:   243 NLQNNRGLLTSDQVLFSTTGAKTVAIVNRFANSQTDFFDTFGQAMIKMGNIRPLTGNNGE 302
             NLQ NRGLL SDQ LFST+GA T+AIVN F+ +QT FF++F Q+MI MGNI PLTG+NGE
Sbjct:   259 NLQTNRGLLQSDQELFSTSGAPTIAIVNNFSANQTAFFESFVQSMINMGNISPLTGSNGE 318

Query:   303 IRSNCRRIN 311
             IRSNCRR N
Sbjct:   319 IRSNCRRPN 327
GO:0004601 "peroxidase activity" evidence=IDA
GO:0020037 "heme binding" evidence=IDA
TAIR|locus:2170204 PA2 "peroxidase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2170214 AT5G06730 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2147630 AT5G19880 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2057180 AT2G38380 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2057165 AT2G38390 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2053129 AT2G18150 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2115335 AT4G36430 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2097273 AT3G32980 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2101298 PRXCA "peroxidase CA" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P11965PERX_TOBAC1, ., 1, 1, ., 1, ., 70.64530.98080.9475N/Ano
P17180PER3_ARMRU1, ., 1, 1, ., 1, ., 70.53690.97440.8739N/Ano
P59121PERE5_ARMRU1, ., 1, 1, ., 1, ., 70.53240.96480.9869N/Ano
Q42578PER53_ARATH1, ., 1, 1, ., 1, ., 70.64210.98400.9194yesno
Q42517PERN_ARMRU1, ., 1, 1, ., 1, ., 70.53050.95840.9174N/Ano
P80679PERA2_ARMRU1, ., 1, 1, ., 1, ., 70.62740.96160.9868N/Ano
P19135PER2_CUCSA1, ., 1, 1, ., 1, ., 70.60130.92970.9965N/Ano
Q9LEH3PER15_IPOBA1, ., 1, 1, ., 1, ., 70.66990.97440.9327N/Ano
P00433PER1A_ARMRU1, ., 1, 1, ., 1, ., 70.51440.98400.8725N/Ano
P15233PER1C_ARMRU1, ., 1, 1, ., 1, ., 70.51760.98400.9277N/Ano
P15232PER1B_ARMRU1, ., 1, 1, ., 1, ., 70.52090.98400.8774N/Ano

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer1.11.1.70.991
3rd Layer1.11.10.976

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query313
cd00693298 cd00693, secretory_peroxidase, Horseradish peroxid 1e-170
PLN03030324 PLN03030, PLN03030, cationic peroxidase; Provision 2e-87
pfam00141180 pfam00141, peroxidase, Peroxidase 9e-59
cd00314255 cd00314, plant_peroxidase_like, Heme-dependent per 4e-26
cd00691253 cd00691, ascorbate_peroxidase, Ascorbate peroxidas 2e-14
PLN02879251 PLN02879, PLN02879, L-ascorbate peroxidase 6e-10
PLN02608289 PLN02608, PLN02608, L-ascorbate peroxidase 3e-09
PLN02364250 PLN02364, PLN02364, L-ascorbate peroxidase 1 9e-08
cd00692328 cd00692, ligninase, Ligninase and other manganese- 3e-04
pfam00141180 pfam00141, peroxidase, Peroxidase 4e-04
cd08201264 cd08201, plant_peroxidase_like_1, Uncharacterized 0.001
>gnl|CDD|173827 cd00693, secretory_peroxidase, Horseradish peroxidase and related secretory plant peroxidases Back     alignment and domain information 
 Score =  472 bits (1217), Expect = e-170
 Identities = 164/303 (54%), Positives = 206/303 (67%), Gaps = 5/303 (1%)

Query: 8   QLSSTFYATTCPNVSSIVRGVVEQARNNDARIGARLIRVHFHDCFVNGCDGSLLLDDSAP 67
           QLS  FY+ +CPN  SIVR VV  A   D R+ A L+R+HFHDCFV GCD S+LLD +  
Sbjct: 1   QLSVGFYSKSCPNAESIVRSVVRAAVKADPRLAAALLRLHFHDCFVRGCDASVLLDST-- 58

Query: 68  GGIQSEKNGNPNLSTGGYEVVDDIKTALENVCPGVVSCADILAIASQILVSLDGGPTWQV 127
               SEK+  PNLS  G++V+DDIK ALE  CPGVVSCADILA+A++  V L GGP+++V
Sbjct: 59  ANNTSEKDAPPNLSLRGFDVIDDIKAALEAACPGVVSCADILALAARDAVVLAGGPSYEV 118

Query: 128 QLGRRDSRTANLAGTSGIPLGNETLDRISEKFRAVGLDDPTDLVALSGAHTFGRARCVAF 187
            LGRRD R ++      +P    ++ ++   F + GL   TDLVALSGAHT GRA C +F
Sbjct: 119 PLGRRDGRVSSANDVGNLPSPFFSVSQLISLFASKGLT-VTDLVALSGAHTIGRAHCSSF 177

Query: 188 RNRLFNFDGAGNPDPTIDPTYLQTLRQNCPQGGNGNALVDLDPTTADGFDNNYFTNLQNN 247
            +RL+NF G G+PDPT+DP Y   LR+ CP GG+ + LV LDP T + FDN+Y+ NL   
Sbjct: 178 SDRLYNFSGTGDPDPTLDPAYAAQLRKKCPAGGDDDTLVPLDPGTPNTFDNSYYKNLLAG 237

Query: 248 RGLLTSDQVLFSTTGAKTVAIVNRFANSQTDFFDTFGQAMIKMGNIRPLTGNNGEIRSNC 307
           RGLLTSDQ L S    +T AIVNR+A +Q  FF  F  AM+KMGNI  LTG+ GEIR NC
Sbjct: 238 RGLLTSDQALLSD--PRTRAIVNRYAANQDAFFRDFAAAMVKMGNIGVLTGSQGEIRKNC 295

Query: 308 RRI 310
           R +
Sbjct: 296 RVV 298

Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. Length = 298
>gnl|CDD|215545 PLN03030, PLN03030, cationic peroxidase; Provisional Back     alignment and domain information
>gnl|CDD|215745 pfam00141, peroxidase, Peroxidase Back     alignment and domain information
>gnl|CDD|173823 cd00314, plant_peroxidase_like, Heme-dependent peroxidases similar to plant peroxidases Back     alignment and domain information
>gnl|CDD|173825 cd00691, ascorbate_peroxidase, Ascorbate peroxidases and cytochrome C peroxidases Back     alignment and domain information
>gnl|CDD|178467 PLN02879, PLN02879, L-ascorbate peroxidase Back     alignment and domain information
>gnl|CDD|178218 PLN02608, PLN02608, L-ascorbate peroxidase Back     alignment and domain information
>gnl|CDD|166005 PLN02364, PLN02364, L-ascorbate peroxidase 1 Back     alignment and domain information
>gnl|CDD|173826 cd00692, ligninase, Ligninase and other manganese-dependent fungal peroxidases Back     alignment and domain information
>gnl|CDD|215745 pfam00141, peroxidase, Peroxidase Back     alignment and domain information
>gnl|CDD|173829 cd08201, plant_peroxidase_like_1, Uncharacterized family of plant peroxidase-like proteins Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 313
PLN03030324 cationic peroxidase; Provisional 100.0
cd00693298 secretory_peroxidase Horseradish peroxidase and re 100.0
PF00141230 peroxidase: Peroxidase; InterPro: IPR002016 Peroxi 100.0
PLN02608289 L-ascorbate peroxidase 100.0
cd00691253 ascorbate_peroxidase Ascorbate peroxidases and cyt 100.0
cd00692328 ligninase Ligninase and other manganese-dependent 100.0
PLN02364250 L-ascorbate peroxidase 1 100.0
PLN02879251 L-ascorbate peroxidase 100.0
cd00314255 plant_peroxidase_like Heme-dependent peroxidases s 100.0
cd00649409 catalase_peroxidase_1 N-terminal catalytic domain 100.0
TIGR00198 716 cat_per_HPI catalase/peroxidase HPI. Note that the 100.0
PRK15061 726 catalase/hydroperoxidase HPI(I); Provisional 100.0
cd08201264 plant_peroxidase_like_1 Uncharacterized family of 100.0
cd08200297 catalase_peroxidase_2 C-terminal non-catalytic dom 100.0
TIGR00198716 cat_per_HPI catalase/peroxidase HPI. Note that the 100.0
PRK15061726 catalase/hydroperoxidase HPI(I); Provisional 100.0
COG0376 730 KatG Catalase (peroxidase I) [Inorganic ion transp 100.0
COG0376730 KatG Catalase (peroxidase I) [Inorganic ion transp 99.63
>PLN03030 cationic peroxidase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=6.4e-101  Score=725.94  Aligned_cols=297  Identities=46%  Similarity=0.818  Sum_probs=281.8

Q ss_pred             cCCCcccccCCCccHHHHHHHHHHHHHhcCccchhhHHHHhhhcccccCCCceeecCCCCCCCCCCccCCCCCCCCCccc
Q 039981            7 AQLSSTFYATTCPNVSSIVRGVVEQARNNDARIGARLIRVHFHDCFVNGCDGSLLLDDSAPGGIQSEKNGNPNLSTGGYE   86 (313)
Q Consensus         7 ~~l~~~~Y~~~Cp~~e~~Vr~~v~~~~~~~~~~a~~~lRl~FHDc~~~GcDgSill~~~~~~~~~~E~~~~~N~~l~g~~   86 (313)
                      ++|+++||++|||++|+||++.|++.+.++++++|++|||+|||||++||||||||+++     ..|+++++|.+++||+
T Consensus        23 ~~L~~~fY~~sCP~aE~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDaSvLl~~~-----~~Ek~a~~N~~l~Gf~   97 (324)
T PLN03030         23 QGTRVGFYSTTCPQAESIVRKTVQSHFQSNPAIAPGLLRMHFHDCFVRGCDASILIDGS-----NTEKTALPNLLLRGYD   97 (324)
T ss_pred             ccCccchhhCcCCCHHHHHHHHHHHHHhhCcccchhhhhhhhhhheecCCceEEeeCCC-----cccccCCCCcCcchHH
Confidence            57999999999999999999999999999999999999999999999999999999854     3799999999889999


Q ss_pred             hHHHHHHHHhhcCCCccchHHHHHHhhHhHhhhcCCCceEeeCCCCCCCCCCCcCCCCCCCCCCCHHHHHHHHHHCCCCC
Q 039981           87 VVDDIKTALENVCPGVVSCADILAIASQILVSLDGGPTWQVQLGRRDSRTANLAGTSGIPLGNETLDRISEKFRAVGLDD  166 (313)
Q Consensus        87 ~i~~iK~~le~~cp~~VS~ADiialaa~~av~~~GGP~~~v~~GR~D~~~s~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~  166 (313)
                      +|+.||+.+|+.||++|||||||+||||+||+++|||.|+|++||||+++|.+..+.+||.|+.++++|++.|+++||+.
T Consensus        98 ~i~~iK~~~e~~CPg~VSCADilalAarDaV~~~gGP~~~v~~GRrDg~~s~~~~~~~LP~p~~~~~~l~~~F~~~Gl~~  177 (324)
T PLN03030         98 VIDDAKTQLEAACPGVVSCADILALAARDSVVLTNGLTWPVPTGRRDGRVSLASDASNLPGFTDSIDVQKQKFAAKGLNT  177 (324)
T ss_pred             HHHHHHHHHHhhCCCcccHHHHHHHHhhccccccCCCceeeeccccCCCCCCcccccCCcCCCCCHHHHHHHHHHcCCCH
Confidence            99999999999999999999999999999999999999999999999999876665589999999999999999999999


Q ss_pred             ccchhhhccccccccccccccccccccCCCCC-CCCCCCCHHHHHHHHhcCCCCCCCCCcccCCCCCCCCCChHHHHHHh
Q 039981          167 PTDLVALSGAHTFGRARCVAFRNRLFNFDGAG-NPDPTIDPTYLQTLRQNCPQGGNGNALVDLDPTTADGFDNNYFTNLQ  245 (313)
Q Consensus       167 ~~elVaL~GaHtiG~~hc~~f~~rl~~~~g~~-~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~~d~~tp~~FDN~Yy~~l~  245 (313)
                      + |||+||||||||++||.+|.+|||||+|.+ .+||+||+.|+..|++.||..+++++.+++|..||.+|||+||++|+
T Consensus       178 ~-DlVaLsGAHTiG~ahC~~f~~Rlynf~~~~~~~Dp~~d~~~~~~L~~~Cp~~~~~~~~~~lD~~Tp~~FDn~Yy~nll  256 (324)
T PLN03030        178 Q-DLVTLVGGHTIGTTACQFFRYRLYNFTTTGNGADPSIDASFVPQLQALCPQNGDGSRRIALDTGSSNRFDASFFSNLK  256 (324)
T ss_pred             H-HheeeeeccccceeeeeccccccccccCCCCCCCCchhHHHHHHHhccCCCCCCCCccccCCCCCCcccccHHHHHHH
Confidence            9 999999999999999999999999998874 58999999999999999996433334678999999999999999999


Q ss_pred             cCcccccchhhhhccCChhHHHHHHHHhcCH----HHHHHHHHHHHHHhhcCCCCCCCCCcccccccccC
Q 039981          246 NNRGLLTSDQVLFSTTGAKTVAIVNRFANSQ----TDFFDTFGQAMIKMGNIRPLTGNNGEIRSNCRRIN  311 (313)
Q Consensus       246 ~~~g~l~sD~~L~~~~d~~t~~~v~~yA~d~----~~F~~~Fa~A~~Kms~lgv~tg~~GeiR~~C~~~n  311 (313)
                      .++|+|+||+.|+.  |++|+++|++||.|+    +.|+++|++||+||++|+|+||.+|||||+|+.+|
T Consensus       257 ~~rGlL~SDq~L~~--d~~T~~~V~~~A~~~~~~~~~F~~~Fa~AmvKMg~i~VlTG~~GEIRk~C~~vN  324 (324)
T PLN03030        257 NGRGILESDQKLWT--DASTRTFVQRFLGVRGLAGLNFNVEFGRSMVKMSNIGVKTGTNGEIRKVCSAIN  324 (324)
T ss_pred             hcCCCcCCchHhhc--CccHHHHHHHHhcccccchhhhHHHHHHHHHHHccCCCCCCCCCceeccccccC
Confidence            99999999999999  999999999999875    59999999999999999999999999999999998

>cd00693 secretory_peroxidase Horseradish peroxidase and related secretory plant peroxidases Back     alignment and domain information
>PF00141 peroxidase: Peroxidase; InterPro: IPR002016 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions Back     alignment and domain information
>PLN02608 L-ascorbate peroxidase Back     alignment and domain information
>cd00691 ascorbate_peroxidase Ascorbate peroxidases and cytochrome C peroxidases Back     alignment and domain information
>cd00692 ligninase Ligninase and other manganese-dependent fungal peroxidases Back     alignment and domain information
>PLN02364 L-ascorbate peroxidase 1 Back     alignment and domain information
>PLN02879 L-ascorbate peroxidase Back     alignment and domain information
>cd00314 plant_peroxidase_like Heme-dependent peroxidases similar to plant peroxidases Back     alignment and domain information
>cd00649 catalase_peroxidase_1 N-terminal catalytic domain of catalase-peroxidases Back     alignment and domain information
>TIGR00198 cat_per_HPI catalase/peroxidase HPI Back     alignment and domain information
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional Back     alignment and domain information
>cd08201 plant_peroxidase_like_1 Uncharacterized family of plant peroxidase-like proteins Back     alignment and domain information
>cd08200 catalase_peroxidase_2 C-terminal non-catalytic domain of catalase-peroxidases Back     alignment and domain information
>TIGR00198 cat_per_HPI catalase/peroxidase HPI Back     alignment and domain information
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional Back     alignment and domain information
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query313
1pa2_A306 Arabidopsis Thaliana Peroxidase A2 Length = 306 1e-111
4a5g_A308 Raphanus Sativus Anionic Peroxidase. Length = 308 1e-102
1gx2_A309 Recombinant Horseradish Peroxidase Phe209ser Comple 9e-85
3atj_A309 Heme Ligand Mutant Of Recombinant Horseradish Perox 1e-84
1w4w_A323 Ferric Horseradish Peroxidase C1a In Complex With F 2e-84
2atj_A308 Recombinant Horseradish Peroxidase Complex With Ben 2e-84
6atj_A308 Recombinant Horseradish Peroxidase C Complex With F 3e-84
1gwo_A309 Recombinant Horseradish Peroxidase C1a Ala170gln Le 3e-84
1qgj_A300 Arabidopsis Thaliana Peroxidase N Length = 300 3e-84
1gwu_A309 Recombinant Horseradish Peroxidase C1a Ala140gly Le 6e-84
1gw2_A308 Recombinant Horseradish Peroxidase C1a Thr171ser In 7e-84
1atj_A306 Recombinant Horseradish Peroxidase C1a Length = 306 9e-84
4atj_A309 Distal Heme Pocket Mutant (H42e) Of Recombinant Hor 2e-83
2ylj_A306 Horse Radish Peroxidase, Mutant S167y Length = 306 4e-83
1kzm_A308 Distal Heme Pocket Mutant (r38s/h42e) Of Recombinan 1e-82
1fhf_A304 The Structure Of Soybean Peroxidase Length = 304 8e-82
1sch_A294 Peanut Peroxidase Length = 294 2e-74
1bgp_A309 Crystal Structure Of Barley Grain Peroxidase 1 Leng 2e-62
3hdl_A304 Crystal Structure Of Highly Glycosylated Peroxidase 8e-55
4ged_A268 Crystal Structure Of The Leishmania Major Peroxidas 8e-10
3riv_A271 The Crystal Structure Of Leishmania Major Peroxidas 9e-10
3riw_A271 The Crystal Structure Of Leishmania Major Peroxidas 9e-10
2cl4_X261 Ascorbate Peroxidase R172a Mutant Length = 261 5e-09
1oaf_A261 Ascobate Peroxidase From Soybean Cytosol In Complex 8e-09
2vcf_X264 Structure Of Isoniazid (Inh) Bound To Cytosolic Soy 8e-09
2xif_A249 The Structure Of Ascorbate Peroxidase Compound Ii L 9e-09
1iyn_A295 Crystal Structure Of Chloroplastic Ascorbate Peroxi 9e-09
1apx_A249 Crystal Structure Of Recombinant Ascorbate Peroxida 2e-08
2y6b_A249 Ascorbate Peroxidase R38k Mutant Length = 249 2e-08
2ggn_X261 Conformational Mobility In The Active Site Of A Hem 3e-08
3zcg_A261 Ascorbate Peroxidase W41a-h42c Mutant Length = 261 5e-08
3zcy_A249 Ascorbate Peroxidase W41a-h42y Mutant Length = 249 5e-08
2y6a_A249 Ascorbate Peroxidase R38a Mutant Length = 249 5e-08
3zch_A261 Ascorbate Peroxidase W41a-h42m Mutant Length = 261 5e-08
2vcs_A261 Structure Of Isoniazid (Inh) Bound To Cytosolic Soy 6e-08
1jci_A294 Stabilization Of The Engineered Cation-Binding Loop 4e-05
1stq_A294 Cyrstal Structure Of Cytochrome C Peroxidase Mutant 1e-04
1sog_A294 Cyrstal Structure Of Cytochrome C Peroxidase Mutant 6e-04
1jdr_A294 Crystal Structure Of A Proximal Domain Potassium Bi 6e-04
>pdb|1PA2|A Chain A, Arabidopsis Thaliana Peroxidase A2 Length = 306 Back     alignment and structure 
Iteration: 1

 Score =  398 bits (1022), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 197/306 (64%), Positives = 239/306 (78%), Gaps = 5/306 (1%)
Query: 8   QLSSTFYATTCPNVSSIVRGVVEQARNNDARIGARLIRVHFHDCFVNGCDGSLLLDDSAP 67
           QL++TFY+ TCPN S+IVR  ++QA  +D RIGA LIR+HFHDCFVNGCD S+LLDD+  
Sbjct: 2   QLNATFYSGTCPNASAIVRSTIQQALQSDTRIGASLIRLHFHDCFVNGCDASILLDDT-- 59
Query: 68  GGIQSEKNGNPNLSTG-GYEVVDDIKTALENVCPGVVSCADILAIASQILVSLDGGPTWQ 126
           G IQSEKN  PN+++  G+ VVD+IKTALEN CPGVVSC+D+LA+AS+  VSL GGP+W 
Sbjct: 60  GSIQSEKNAGPNVNSARGFNVVDNIKTALENACPGVVSCSDVLALASEASVSLAGGPSWT 119
Query: 127 VQLGRRDSRTANLAGT-SGIPLGNETLDRISEKFRAVGLDDPTDLVALSGAHTFGRARCV 185
           V LGRRDS TANLAG  S IP   E+L  I+ KF AVGL+   DLVALSGAHTFGRARC 
Sbjct: 120 VLLGRRDSLTANLAGANSSIPSPIESLSNITFKFSAVGLNT-NDLVALSGAHTFGRARCG 178
Query: 186 AFRNRLFNFDGAGNPDPTIDPTYLQTLRQNCPQGGNGNALVDLDPTTADGFDNNYFTNLQ 245
            F NRLFNF G GNPDPT++ T L TL+Q CPQ G+ + + +LD +T D FDNNYF NLQ
Sbjct: 179 VFNNRLFNFSGTGNPDPTLNSTLLSTLQQLCPQNGSASTITNLDLSTPDAFDNNYFANLQ 238
Query: 246 NNRGLLTSDQVLFSTTGAKTVAIVNRFANSQTDFFDTFGQAMIKMGNIRPLTGNNGEIRS 305
           +N GLL SDQ LFSTTG+ T+AIV  FA++QT FF  F Q+MI MGNI PLTG+NGEIR 
Sbjct: 239 SNDGLLQSDQELFSTTGSSTIAIVTSFASNQTLFFQAFAQSMINMGNISPLTGSNGEIRL 298
Query: 306 NCRRIN 311
           +C+++N
Sbjct: 299 DCKKVN 304
>pdb|4A5G|A Chain A, Raphanus Sativus Anionic Peroxidase. Length = 308 Back     alignment and structure
>pdb|1GX2|A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|3ATJ|A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|1W4W|A Chain A, Ferric Horseradish Peroxidase C1a In Complex With Formate Length = 323 Back     alignment and structure
>pdb|2ATJ|A Chain A, Recombinant Horseradish Peroxidase Complex With Benzhydroxamic Acid Length = 308 Back     alignment and structure
>pdb|6ATJ|A Chain A, Recombinant Horseradish Peroxidase C Complex With Ferulic Acid Length = 308 Back     alignment and structure
>pdb|1GWO|A Chain A, Recombinant Horseradish Peroxidase C1a Ala170gln Length = 309 Back     alignment and structure
>pdb|1QGJ|A Chain A, Arabidopsis Thaliana Peroxidase N Length = 300 Back     alignment and structure
>pdb|1GWU|A Chain A, Recombinant Horseradish Peroxidase C1a Ala140gly Length = 309 Back     alignment and structure
>pdb|1GW2|A Chain A, Recombinant Horseradish Peroxidase C1a Thr171ser In Complex With Ferulic Acid Length = 308 Back     alignment and structure
>pdb|1ATJ|A Chain A, Recombinant Horseradish Peroxidase C1a Length = 306 Back     alignment and structure
>pdb|4ATJ|A Chain A, Distal Heme Pocket Mutant (H42e) Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|2YLJ|A Chain A, Horse Radish Peroxidase, Mutant S167y Length = 306 Back     alignment and structure
>pdb|1KZM|A Chain A, Distal Heme Pocket Mutant (r38s/h42e) Of Recombinant Horseradish Peroxidase C (hrp C) Length = 308 Back     alignment and structure
>pdb|1FHF|A Chain A, The Structure Of Soybean Peroxidase Length = 304 Back     alignment and structure
>pdb|1SCH|A Chain A, Peanut Peroxidase Length = 294 Back     alignment and structure
>pdb|1BGP|A Chain A, Crystal Structure Of Barley Grain Peroxidase 1 Length = 309 Back     alignment and structure
>pdb|3HDL|A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree Length = 304 Back     alignment and structure
>pdb|4GED|A Chain A, Crystal Structure Of The Leishmania Major Peroxidase-Cytochrome C Complex Length = 268 Back     alignment and structure
>pdb|3RIV|A Chain A, The Crystal Structure Of Leishmania Major Peroxidase Length = 271 Back     alignment and structure
>pdb|3RIW|A Chain A, The Crystal Structure Of Leishmania Major Peroxidase Mutant C197t Length = 271 Back     alignment and structure
>pdb|2CL4|X Chain X, Ascorbate Peroxidase R172a Mutant Length = 261 Back     alignment and structure
>pdb|1OAF|A Chain A, Ascobate Peroxidase From Soybean Cytosol In Complex With Ascorbate Length = 261 Back     alignment and structure
>pdb|2VCF|X Chain X, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean Ascorbate Peroxidase Length = 264 Back     alignment and structure
>pdb|2XIF|A Chain A, The Structure Of Ascorbate Peroxidase Compound Ii Length = 249 Back     alignment and structure
>pdb|1IYN|A Chain A, Crystal Structure Of Chloroplastic Ascorbate Peroxidase From Tobacco Plants And Structural Insights For Its Instability Length = 295 Back     alignment and structure
>pdb|1APX|A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase Length = 249 Back     alignment and structure
>pdb|2Y6B|A Chain A, Ascorbate Peroxidase R38k Mutant Length = 249 Back     alignment and structure
>pdb|2GGN|X Chain X, Conformational Mobility In The Active Site Of A Heme Peroxidase Length = 261 Back     alignment and structure
>pdb|3ZCG|A Chain A, Ascorbate Peroxidase W41a-h42c Mutant Length = 261 Back     alignment and structure
>pdb|3ZCY|A Chain A, Ascorbate Peroxidase W41a-h42y Mutant Length = 249 Back     alignment and structure
>pdb|2Y6A|A Chain A, Ascorbate Peroxidase R38a Mutant Length = 249 Back     alignment and structure
>pdb|3ZCH|A Chain A, Ascorbate Peroxidase W41a-h42m Mutant Length = 261 Back     alignment and structure
>pdb|2VCS|A Chain A, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean Ascorbate Peroxidase Mutant H42a Length = 261 Back     alignment and structure
>pdb|1JCI|A Chain A, Stabilization Of The Engineered Cation-Binding Loop In Cytochrome C Peroxidase (Ccp) Length = 294 Back     alignment and structure
>pdb|1STQ|A Chain A, Cyrstal Structure Of Cytochrome C Peroxidase Mutant: Ccpk2m3 Length = 294 Back     alignment and structure
>pdb|1SOG|A Chain A, Cyrstal Structure Of Cytochrome C Peroxidase Mutant: Ccpk2m2 Length = 294 Back     alignment and structure
>pdb|1JDR|A Chain A, Crystal Structure Of A Proximal Domain Potassium Binding Variant Of Cytochrome C Peroxidase Length = 294 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query313
1pa2_A306 Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45 1e-180
1gwu_A309 Peroxidase C1A; oxidoreductase, glycoprotein, heme 1e-178
1fhf_A304 SEED coat peroxidase; oxidoreductase; HET: HEM; 2. 1e-177
1qgj_A300 Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A 1e-172
3hdl_A304 Royal PALM TREE peroxidase; glycosylated, oxidored 1e-171
1sch_A294 PNP, peanut peroxidase, major cationic isozyme; ca 1e-169
1bgp_A309 Barley grain peroxidase; chromoprotein, oxidoreduc 1e-165
1iyn_A295 Chloroplastic ascorbate peroxidase; hydrogen perox 2e-83
2vcn_A261 Ascorbate peroxidase; INH, APX, isoniazid, oxidore 6e-66
3fmu_A331 VersatIle peroxidase VPL2; class II (fungal) perox 3e-63
3m5q_A357 Manganese peroxidase 1; heme, Mn(II)-binding site, 8e-63
1llp_A343 LIP4.15, lignin peroxidase; heme protein, glyco pr 1e-54
2e39_A344 Peroxidase; heme protein, coordination geometry of 5e-54
3q3u_A338 Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A 6e-53
3riv_A271 Ascorbate peroxidase; alpha helical bundle, heme p 1e-18
3e2o_A294 CCP, cytochrome C peroxidase; cytochrome C peroxid 1e-15
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-05
3rrw_A268 Thylakoid lumenal 29 kDa protein, chloroplastic; c 4e-04
>1pa2_A Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45A {Arabidopsis thaliana} SCOP: a.93.1.1 PDB: 1qo4_A* Length = 306 Back     alignment and structure
 Score =  497 bits (1282), Expect = e-180
 Identities = 197/308 (63%), Positives = 238/308 (77%), Gaps = 5/308 (1%)

Query: 8   QLSSTFYATTCPNVSSIVRGVVEQARNNDARIGARLIRVHFHDCFVNGCDGSLLLDDSAP 67
           QL++TFY+ TCPN S+IVR  ++QA  +D RIGA LIR+HFHDCFVNGCD S+LLDD+  
Sbjct: 2   QLNATFYSGTCPNASAIVRSTIQQALQSDTRIGASLIRLHFHDCFVNGCDASILLDDTG- 60

Query: 68  GGIQSEKNGNPNL-STGGYEVVDDIKTALENVCPGVVSCADILAIASQILVSLDGGPTWQ 126
             IQSEKN  PN+ S  G+ VVD+IKTALEN CPGVVSC+D+LA+AS+  VSL GGP+W 
Sbjct: 61  -SIQSEKNAGPNVNSARGFNVVDNIKTALENACPGVVSCSDVLALASEASVSLAGGPSWT 119

Query: 127 VQLGRRDSRTANLAG-TSGIPLGNETLDRISEKFRAVGLDDPTDLVALSGAHTFGRARCV 185
           V LGRRDS TANLAG  S IP   E+L  I+ KF AVGL+   DLVALSGAHTFGRARC 
Sbjct: 120 VLLGRRDSLTANLAGANSSIPSPIESLSNITFKFSAVGLN-TNDLVALSGAHTFGRARCG 178

Query: 186 AFRNRLFNFDGAGNPDPTIDPTYLQTLRQNCPQGGNGNALVDLDPTTADGFDNNYFTNLQ 245
            F NRLFNF G GNPDPT++ T L TL+Q CPQ G+ + + +LD +T D FDNNYF NLQ
Sbjct: 179 VFNNRLFNFSGTGNPDPTLNSTLLSTLQQLCPQNGSASTITNLDLSTPDAFDNNYFANLQ 238

Query: 246 NNRGLLTSDQVLFSTTGAKTVAIVNRFANSQTDFFDTFGQAMIKMGNIRPLTGNNGEIRS 305
           +N GLL SDQ LFSTTG+ T+AIV  FA++QT FF  F Q+MI MGNI PLTG+NGEIR 
Sbjct: 239 SNDGLLQSDQELFSTTGSSTIAIVTSFASNQTLFFQAFAQSMINMGNISPLTGSNGEIRL 298

Query: 306 NCRRINSN 313
           +C+++N +
Sbjct: 299 DCKKVNGS 306
>1gwu_A Peroxidase C1A; oxidoreductase, glycoprotein, heme, multigene family, signal,; HET: HEM; 1.31A {Armoracia rusticana} SCOP: a.93.1.1 PDB: 1w4w_A* 1w4y_A* 1gwo_A* 2atj_A* 1gwt_A* 3atj_A* 1gx2_A* 7atj_A* 1h55_A* 1h58_A* 1h5a_A* 1h5c_A* 1h5d_A* 1h5e_A* 1h5f_A* 1h57_A* 1h5h_A* 1h5i_A* 1h5j_A* 1h5k_A* ... Length = 309 Back     alignment and structure
>1fhf_A SEED coat peroxidase; oxidoreductase; HET: HEM; 2.80A {Glycine max} SCOP: a.93.1.1 Length = 304 Back     alignment and structure
>1qgj_A Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A {Arabidopsis thaliana} SCOP: a.93.1.1 Length = 300 Back     alignment and structure
>3hdl_A Royal PALM TREE peroxidase; glycosylated, oxidoreductase; HET: HEM MES NAG FUC MAN; 1.85A {Roystonea regia} Length = 304 Back     alignment and structure
>1sch_A PNP, peanut peroxidase, major cationic isozyme; calcium binding, glycosylation, oxidoreductase; HET: NAG HEM; 2.56A {Arachis hypogaea} SCOP: a.93.1.1 Length = 294 Back     alignment and structure
>1bgp_A Barley grain peroxidase; chromoprotein, oxidoreductase; HET: HEM; 1.90A {Hordeum vulgare} SCOP: a.93.1.1 Length = 309 Back     alignment and structure
>1iyn_A Chloroplastic ascorbate peroxidase; hydrogen peroxide, tobacco plant, stromal ascorbate peroxidase, oxidoreductase; HET: HEM; 1.60A {Nicotiana tabacum} SCOP: a.93.1.1 Length = 295 Back     alignment and structure
>2vcn_A Ascorbate peroxidase; INH, APX, isoniazid, oxidoreductase; HET: HEM ISZ; 1.20A {Glycine max} PDB: 2ggn_X* 2ghd_X* 2ghe_X* 2ghc_X* 2vnx_X* 2vnz_X* 2vo2_X* 2wd4_A* 1oaf_A* 1oag_A* 1v0h_X* 2ghh_X* 2ghk_X* 2vcf_X* 2cl4_X* 2vcs_A* 2xi6_A* 2xif_A* 2xih_A* 2xj6_A* ... Length = 261 Back     alignment and structure
>3fmu_A VersatIle peroxidase VPL2; class II (fungal) peroxidases, protoporphyrin IX, electron T lignin peroxidase, lignin degradation; HET: HEM; 1.04A {Pleurotus eryngii} PDB: 3fjw_A* 2boq_A* 3fm1_A* 3fm4_A* 3fm6_A* 3fkg_A* 2w23_A* 2vka_A* Length = 331 Back     alignment and structure
>3m5q_A Manganese peroxidase 1; heme, Mn(II)-binding site, Ca(II)-binding site, glycosylation, ultrahigh resolution, calcium; HET: NAG MAN HEM; 0.93A {Phanerochaete chrysosporium} PDB: 1mnp_A* 1yyg_A* 1yzp_A* 1yzr_A* 1yyd_A* 3m8m_A* 1mn1_A* 1mn2_A* Length = 357 Back     alignment and structure
>1llp_A LIP4.15, lignin peroxidase; heme protein, glyco protein,, oxidoreductase; HET: NAG MAN A2G HEM; 1.70A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1lga_A* 1b80_A* 1b82_A* 1b85_A* 1qpa_A* Length = 343 Back     alignment and structure
>2e39_A Peroxidase; heme protein, coordination geometry of heme iron, ARP, perox oxidoreductase; HET: NAG MAN HEM; 1.30A {'arthromyces ramosus'} SCOP: a.93.1.1 PDB: 1arp_A* 1arv_A* 1arw_A* 1arx_A* 1ary_A* 1c8i_A* 1ck6_A* 1gza_A* 1gzb_A* 1hsr_A* 1aru_A* 2e3a_A* 2e3b_A* 1lyk_A* 1lyc_A* 1ly9_A* 1h3j_A* 1ly8_A* Length = 344 Back     alignment and structure
>3q3u_A Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A {Trametes cervina} Length = 338 Back     alignment and structure
>3riv_A Ascorbate peroxidase; alpha helical bundle, heme peroxidase, oxidoreductase; HET: HEM; 1.76A {Leishmania major} PDB: 3riw_A* Length = 271 Back     alignment and structure
>3e2o_A CCP, cytochrome C peroxidase; cytochrome C peroxidase (CCP), heme, hydrogen peroxide, iron, metal-binding, mitochondrion; HET: HEM; 1.06A {Saccharomyces cerevisiae} PDB: 1z53_A* 1kok_A* 1sbm_A* 1sdq_A* 1s73_A* 1zby_A* 1zbz_A* 2b0z_A* 2b10_A* 2b11_A* 2b12_A* 2cyp_A* 2ycg_A* 2v23_A* 1ebe_A* 3r98_A* 3r99_A* 1mkr_A* 1mk8_A* 1mkq_A* ... Length = 294 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3rrw_A Thylakoid lumenal 29 kDa protein, chloroplastic; chloroplast thylakoid lumen, plant protein; 2.50A {Arabidopsis thaliana} Length = 268 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query313
3hdl_A304 Royal PALM TREE peroxidase; glycosylated, oxidored 100.0
1fhf_A304 SEED coat peroxidase; oxidoreductase; HET: HEM; 2. 100.0
1pa2_A306 Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45 100.0
1gwu_A309 Peroxidase C1A; oxidoreductase, glycoprotein, heme 100.0
1sch_A294 PNP, peanut peroxidase, major cationic isozyme; ca 100.0
1qgj_A300 Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A 100.0
1bgp_A309 Barley grain peroxidase; chromoprotein, oxidoreduc 100.0
1iyn_A295 Chloroplastic ascorbate peroxidase; hydrogen perox 100.0
1llp_A343 LIP4.15, lignin peroxidase; heme protein, glyco pr 100.0
2e39_A344 Peroxidase; heme protein, coordination geometry of 100.0
2cca_A 740 Peroxidase/catalase T; oxidoreductase, catalase-pe 100.0
3m5q_A357 Manganese peroxidase 1; heme, Mn(II)-binding site, 100.0
3fmu_A331 VersatIle peroxidase VPL2; class II (fungal) perox 100.0
1itk_A 731 Catalase-peroxidase; heme protein, oxidoreductase; 100.0
1ub2_A 720 Catalase-peroxidase; KATG, cyanobacteria, oxidored 100.0
2vcn_A261 Ascorbate peroxidase; INH, APX, isoniazid, oxidore 100.0
3q3u_A338 Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A 100.0
3riv_A271 Ascorbate peroxidase; alpha helical bundle, heme p 100.0
3e2o_A294 CCP, cytochrome C peroxidase; cytochrome C peroxid 100.0
3ut2_A 764 Catalase-peroxidase 2; KATG, fungal, heme enzyme, 100.0
3n3r_A 748 Catalase-peroxidase; E198A variant, tuberclosis, i 100.0
3vli_A 737 Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1 100.0
1u2k_A309 Peroxidase/catalase HPI; KATG, catalase-peroxidase 100.0
2cca_A740 Peroxidase/catalase T; oxidoreductase, catalase-pe 100.0
3rrw_A268 Thylakoid lumenal 29 kDa protein, chloroplastic; c 100.0
1itk_A731 Catalase-peroxidase; heme protein, oxidoreductase; 100.0
1ub2_A720 Catalase-peroxidase; KATG, cyanobacteria, oxidored 100.0
3vli_A737 Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1 100.0
3n3r_A748 Catalase-peroxidase; E198A variant, tuberclosis, i 100.0
3ut2_A764 Catalase-peroxidase 2; KATG, fungal, heme enzyme, 100.0
>3hdl_A Royal PALM TREE peroxidase; glycosylated, oxidoreductase; HET: HEM MES NAG FUC MAN; 1.85A {Roystonea regia} SCOP: a.93.1.0 Back     alignment and structure
Probab=100.00  E-value=1.9e-105  Score=754.03  Aligned_cols=299  Identities=43%  Similarity=0.696  Sum_probs=288.8

Q ss_pred             CCcccccCCCccHHHHHHHHHHHHHhcCccchhhHHHHhhhcccccCCCceeecCCCCCCCCCCccCCCCCC-CCCccch
Q 039981            9 LSSTFYATTCPNVSSIVRGVVEQARNNDARIGARLIRVHFHDCFVNGCDGSLLLDDSAPGGIQSEKNGNPNL-STGGYEV   87 (313)
Q Consensus         9 l~~~~Y~~~Cp~~e~~Vr~~v~~~~~~~~~~a~~~lRl~FHDc~~~GcDgSill~~~~~~~~~~E~~~~~N~-~l~g~~~   87 (313)
                      |+++||++|||++|+|||+.|++++.++++++|++|||+||||||+||||||||+++  +++.+|+++++|. +|+||++
T Consensus         2 L~~~fY~~sCP~~e~iVr~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDgSiLld~t--~~~~~Ek~~~~N~~~lrgf~v   79 (304)
T 3hdl_A            2 LQIGFYNTSCPTAESLVQQAVAAAFANNSGIAPGLIRMHFHDCFVRGCDASVLLDST--ANNTAEKDAIPNNPSLRGFEV   79 (304)
T ss_dssp             CEETTTTTTCTTHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHTTTSSSSGGGCCCB--TTBCCGGGSTTTTTTCCCHHH
T ss_pred             CccChhhCcCcCHHHHHHHHHHHHHHhCCcchHHHHHHheecccCCCCCeeeeecCC--CCCcccccCCCcccchHHHHH
Confidence            889999999999999999999999999999999999999999999999999999987  6778999999999 6799999


Q ss_pred             HHHHHHHHhhcCCCccchHHHHHHhhHhHhhhcCCCceEeeCCCCCCCCCCCcCCC-CCCCCCCCHHHHHHHHHHCCCCC
Q 039981           88 VDDIKTALENVCPGVVSCADILAIASQILVSLDGGPTWQVQLGRRDSRTANLAGTS-GIPLGNETLDRISEKFRAVGLDD  166 (313)
Q Consensus        88 i~~iK~~le~~cp~~VS~ADiialaa~~av~~~GGP~~~v~~GR~D~~~s~~~~~~-~lP~p~~~~~~l~~~F~~~Gl~~  166 (313)
                      |+.||++||+.||++|||||||+||||+||+++|||.|+|++||+|++++.+..+. +||.|+.++++|++.|++|||++
T Consensus        80 id~iK~~le~~Cp~~VScADilalAardav~~~GGP~~~v~~GRrD~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~  159 (304)
T 3hdl_A           80 ITAAKSAVEAACPQTVSCADILAFAARDSANLAGNITYQVPSGRRDGTVSLASEANAQIPSPLFNATQLINSFANKTLTA  159 (304)
T ss_dssp             HHHHHHHHHHHSTTTSCHHHHHHHHHHHHHHHHHCCCCCCEECCCBCSCCCHHHHHHHSCCTTCCHHHHHHHHHTTTCCH
T ss_pred             HHHHHHHHHhhCCCCccHHHHHHHHHhhhhhccCCCccccccCccCCCCCCccccccCCCCCCCCHHHHHHHHHHcCCCH
Confidence            99999999999999999999999999999999999999999999999999887666 89999999999999999999999


Q ss_pred             ccchhhhccccccccccccccccccccCCCCCCCCCCCCHHHHHHHHhcCCCCCC--CCCcccCCCCCCCCCChHHHHHH
Q 039981          167 PTDLVALSGAHTFGRARCVAFRNRLFNFDGAGNPDPTIDPTYLQTLRQNCPQGGN--GNALVDLDPTTADGFDNNYFTNL  244 (313)
Q Consensus       167 ~~elVaL~GaHtiG~~hc~~f~~rl~~~~g~~~~dp~~~~~~~~~L~~~Cp~~~~--~~~~~~~d~~tp~~FDN~Yy~~l  244 (313)
                      + ||||||||||||++||.+|.+|||||+|.+.+||+|++.|++.|++.||...+  +++.++||..||.+|||+||++|
T Consensus       160 ~-d~VaLsGaHTiG~ahC~~f~~Rly~f~~~~~~DP~ld~~~a~~L~~~Cp~~~~~~~~~~~~lD~~TP~~FDN~Yy~nL  238 (304)
T 3hdl_A          160 D-EMVTLSGAHSIGVAHCSSFTNRLYNFNSGSGIDPTLSPSYAALLRNTCPANSTRFTPITVSLDIITPSVLDNMYYTGV  238 (304)
T ss_dssp             H-HHHHHGGGGGSSEEEGGGTGGGTSSCSSSSSSCTTSCHHHHHHHHHHSCTTCCTTSCCEEESCSSSTTSCSTHHHHHH
T ss_pred             H-HhhhhhccccccccccchhhhhhcccCCCCCCCCcccHHHHHHHhccCCCCCCCCCccccCCCCCCcccccHHHHHHH
Confidence            9 99999999999999999999999999998889999999999999999997655  67788999999999999999999


Q ss_pred             hcCcccccchhhhhccCChhHHHHHHHHhcCHHHHHHHHHHHHHHhhcCCCCCCCCCcccccccccCC
Q 039981          245 QNNRGLLTSDQVLFSTTGAKTVAIVNRFANSQTDFFDTFGQAMIKMGNIRPLTGNNGEIRSNCRRINS  312 (313)
Q Consensus       245 ~~~~g~l~sD~~L~~~~d~~t~~~v~~yA~d~~~F~~~Fa~A~~Kms~lgv~tg~~GeiR~~C~~~n~  312 (313)
                      +.++|+|+||++|+.  |++|+++|++||.||.+|+++|++||+||++|||+||.+||||++|+++|+
T Consensus       239 ~~~~glL~SDq~L~~--d~~t~~~V~~yA~~~~~F~~~Fa~AmvKmg~igv~tg~~GeIR~~C~~~N~  304 (304)
T 3hdl_A          239 QLTLGLLTSDQALVT--EANLSAAVKANAMNLTAWASKFAQAMVKMGQIEVLTGTQGEIRTNCSVVNS  304 (304)
T ss_dssp             HTTCCCSHHHHGGGS--SHHHHHHHHHHHHCHHHHHHHHHHHHHHHTTTTCCCTTSSBCCSBTTBCC-
T ss_pred             HhCcCCCCCCHHHhc--CccHHHHHHHhccCHHHHHHHHHHHHHHHHhcCCCCCCCCeeeCCccccCC
Confidence            999999999999999  999999999999999999999999999999999999999999999999994
>1fhf_A SEED coat peroxidase; oxidoreductase; HET: HEM; 2.80A {Glycine max} SCOP: a.93.1.1 Back     alignment and structure
>1pa2_A Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45A {Arabidopsis thaliana} SCOP: a.93.1.1 PDB: 1qo4_A* Back     alignment and structure
>1gwu_A Peroxidase C1A; oxidoreductase, glycoprotein, heme, multigene family, signal,; HET: HEM; 1.31A {Armoracia rusticana} SCOP: a.93.1.1 PDB: 1w4w_A* 1w4y_A* 1gwo_A* 2atj_A* 1gwt_A* 3atj_A* 1gx2_A* 7atj_A* 1h55_A* 1h58_A* 1h5a_A* 1h5c_A* 1h5d_A* 1h5e_A* 1h5f_A* 1h57_A* 1h5h_A* 1h5i_A* 1h5j_A* 1h5k_A* ... Back     alignment and structure
>1sch_A PNP, peanut peroxidase, major cationic isozyme; calcium binding, glycosylation, oxidoreductase; HET: NAG HEM; 2.56A {Arachis hypogaea} SCOP: a.93.1.1 Back     alignment and structure
>1qgj_A Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A {Arabidopsis thaliana} SCOP: a.93.1.1 Back     alignment and structure
>1bgp_A Barley grain peroxidase; chromoprotein, oxidoreductase; HET: HEM; 1.90A {Hordeum vulgare} SCOP: a.93.1.1 Back     alignment and structure
>1iyn_A Chloroplastic ascorbate peroxidase; hydrogen peroxide, tobacco plant, stromal ascorbate peroxidase, oxidoreductase; HET: HEM; 1.60A {Nicotiana tabacum} SCOP: a.93.1.1 Back     alignment and structure
>1llp_A LIP4.15, lignin peroxidase; heme protein, glyco protein,, oxidoreductase; HET: NAG MAN A2G HEM; 1.70A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1lga_A* 1b80_A* 1b82_A* 1b85_A* 1qpa_A* Back     alignment and structure
>2e39_A Peroxidase; heme protein, coordination geometry of heme iron, ARP, perox oxidoreductase; HET: NAG MAN HEM; 1.30A {'arthromyces ramosus'} SCOP: a.93.1.1 PDB: 1arp_A* 1arv_A* 1arw_A* 1arx_A* 1ary_A* 1c8i_A* 1ck6_A* 1gza_A* 1gzb_A* 1hsr_A* 1aru_A* 2e3a_A* 2e3b_A* 1lyk_A* 1lyc_A* 1ly9_A* 1h3j_A* 1ly8_A* Back     alignment and structure
>2cca_A Peroxidase/catalase T; oxidoreductase, catalase-peroxidase, KATG, heme, hydrogen peroxide, iron, metal-binding, organic radical; HET: HEM; 2.0A {Mycobacterium tuberculosis} SCOP: a.93.1.3 a.93.1.3 PDB: 1sj2_A* 2ccd_A* Back     alignment and structure
>3m5q_A Manganese peroxidase 1; heme, Mn(II)-binding site, Ca(II)-binding site, glycosylation, ultrahigh resolution, calcium; HET: NAG MAN HEM; 0.93A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1mnp_A* 1yyg_A* 1yzp_A* 1yzr_A* 1yyd_A* 3m8m_A* 1mn1_A* 1mn2_A* Back     alignment and structure
>3fmu_A VersatIle peroxidase VPL2; class II (fungal) peroxidases, protoporphyrin IX, electron T lignin peroxidase, lignin degradation; HET: HEM; 1.04A {Pleurotus eryngii} PDB: 3fjw_A* 2boq_A* 3fm1_A* 3fm4_A* 3fm6_A* 3fkg_A* 2w23_A* 2vka_A* 4fcn_A* 4g05_A* 4fcs_A* 4fef_A* 4fdq_A* Back     alignment and structure
>1itk_A Catalase-peroxidase; heme protein, oxidoreductase; HET: HEM; 2.00A {Haloarcula marismortui} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>1ub2_A Catalase-peroxidase; KATG, cyanobacteria, oxidoreductase; HET: HEM; 2.40A {Synechococcus elongatus} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>2vcn_A Ascorbate peroxidase; INH, APX, isoniazid, oxidoreductase; HET: HEM ISZ; 1.20A {Glycine max} PDB: 2ggn_X* 2ghd_X* 2ghe_X* 2ghc_X* 2vnx_X* 2vnz_X* 2vo2_X* 2wd4_A* 1oaf_A* 1oag_A* 1v0h_X* 2ghh_X* 2ghk_X* 2vcf_X* 2cl4_X* 2vcs_A* 2xi6_A* 2xif_A* 2xih_A* 2xj6_A* ... Back     alignment and structure
>3q3u_A Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A {Trametes cervina} SCOP: a.93.1.0 Back     alignment and structure
>3riv_A Ascorbate peroxidase; alpha helical bundle, heme peroxidase, oxidoreductase; HET: HEM; 1.76A {Leishmania major} PDB: 3riw_A* 4ged_A* Back     alignment and structure
>3e2o_A CCP, cytochrome C peroxidase; cytochrome C peroxidase (CCP), heme, hydrogen peroxide, iron, metal-binding, mitochondrion; HET: HEM; 1.06A {Saccharomyces cerevisiae} SCOP: a.93.1.1 PDB: 4a71_A* 1z53_A* 1kok_A* 1sbm_A* 1sdq_A* 1s73_A* 1zby_A* 1zbz_A* 2b0z_A* 2b10_A* 2b11_A* 2b12_A* 2cyp_A* 2ycg_A* 4a6z_A* 2v23_A* 1ebe_A* 3r98_A* 3r99_A* 1mkr_A* ... Back     alignment and structure
>3ut2_A Catalase-peroxidase 2; KATG, fungal, heme enzyme, oxidoreducta; HET: TOX HEM; 1.55A {Magnaporthe oryzae 70-15} Back     alignment and structure
>3n3r_A Catalase-peroxidase; E198A variant, tuberclosis, isonicotini hydrazide binding, oxidoreductase; HET: TOX HEM; 1.60A {Burkholderia pseudomallei} PDB: 3n3s_A* 3n3o_A* 2fxj_A* 3n3p_A* 2fxg_A* 3n3n_A* 2fxh_A* 2dv2_A* 3n3q_A* 2dv1_A* 1x7u_A* 1mwv_A* 2b2o_A* 2b2q_A* 2b2r_A* 2b2s_A* Back     alignment and structure
>3vli_A Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1.70A {Haloarcula marismortui} PDB: 3vlh_A* 3vlj_A* 3vlk_A* 3vll_A* 3uw8_A* 3vlm_A* 1itk_A* Back     alignment and structure
>1u2k_A Peroxidase/catalase HPI; KATG, catalase-peroxidase, C-terminal domain, oxidoreductase; 2.00A {Escherichia coli} SCOP: a.93.1.3 PDB: 1u2l_A 1u2j_A Back     alignment and structure
>2cca_A Peroxidase/catalase T; oxidoreductase, catalase-peroxidase, KATG, heme, hydrogen peroxide, iron, metal-binding, organic radical; HET: HEM; 2.0A {Mycobacterium tuberculosis} SCOP: a.93.1.3 a.93.1.3 PDB: 1sj2_A* 2ccd_A* Back     alignment and structure
>3rrw_A Thylakoid lumenal 29 kDa protein, chloroplastic; chloroplast thylakoid lumen, plant protein; 2.50A {Arabidopsis thaliana} Back     alignment and structure
>1itk_A Catalase-peroxidase; heme protein, oxidoreductase; HET: HEM; 2.00A {Haloarcula marismortui} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>1ub2_A Catalase-peroxidase; KATG, cyanobacteria, oxidoreductase; HET: HEM; 2.40A {Synechococcus elongatus} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>3vli_A Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1.70A {Haloarcula marismortui} PDB: 3vlh_A* 3vlj_A* 3vlk_A* 3vll_A* 3uw8_A* 3vlm_A* 1itk_A* Back     alignment and structure
>3n3r_A Catalase-peroxidase; E198A variant, tuberclosis, isonicotini hydrazide binding, oxidoreductase; HET: TOX HEM; 1.60A {Burkholderia pseudomallei} PDB: 3n3s_A* 3n3o_A* 2fxj_A* 3n3p_A* 2fxg_A* 3n3n_A* 2fxh_A* 2dv2_A* 3n3q_A* 2dv1_A* 1x7u_A* 1mwv_A* 2b2o_A* 2b2q_A* 2b2r_A* 2b2s_A* Back     alignment and structure
>3ut2_A Catalase-peroxidase 2; KATG, fungal, heme enzyme, oxidoreducta; HET: TOX HEM; 1.55A {Magnaporthe oryzae 70-15} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 313
d1pa2a_306 a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (A 1e-123
d1fhfa_304 a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine m 1e-122
d1gwua_307 a.93.1.1 (A:) Plant peroxidase {Horseradish (Armor 1e-119
d1qgja_300 a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (A 1e-118
d1bgpa_309 a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vu 1e-110
d1scha_294 a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hy 1e-108
d1llpa_343 a.93.1.1 (A:) Fungal peroxidase (ligninase) {White 2e-62
d1yyda1357 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) { 5e-62
d2e39a1336 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) { 3e-59
d1oafa_250 a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glyci 2e-43
d2euta1291 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {B 2e-39
d1iyna_275 a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco 1e-38
>d1pa2a_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase A2 [TaxId: 3702]} Length = 306 Back     information, alignment and structure

class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Plant peroxidase
species: Mouse-ear cress (Arabidopsis thaliana), peroxidase A2 [TaxId: 3702]

 Score =  353 bits (907), Expect = e-123
 Identities = 197/307 (64%), Positives = 238/307 (77%), Gaps = 5/307 (1%)

Query: 8   QLSSTFYATTCPNVSSIVRGVVEQARNNDARIGARLIRVHFHDCFVNGCDGSLLLDDSAP 67
           QL++TFY+ TCPN S+IVR  ++QA  +D RIGA LIR+HFHDCFVNGCD S+LLDD+  
Sbjct: 2   QLNATFYSGTCPNASAIVRSTIQQALQSDTRIGASLIRLHFHDCFVNGCDASILLDDT-- 59

Query: 68  GGIQSEKNGNPNL-STGGYEVVDDIKTALENVCPGVVSCADILAIASQILVSLDGGPTWQ 126
           G IQSEKN  PN+ S  G+ VVD+IKTALEN CPGVVSC+D+LA+AS+  VSL GGP+W 
Sbjct: 60  GSIQSEKNAGPNVNSARGFNVVDNIKTALENACPGVVSCSDVLALASEASVSLAGGPSWT 119

Query: 127 VQLGRRDSRTANLAGTSG-IPLGNETLDRISEKFRAVGLDDPTDLVALSGAHTFGRARCV 185
           V LGRRDS TANLAG +  IP   E+L  I+ KF AVGL+   DLVALSGAHTFGRARC 
Sbjct: 120 VLLGRRDSLTANLAGANSSIPSPIESLSNITFKFSAVGLN-TNDLVALSGAHTFGRARCG 178

Query: 186 AFRNRLFNFDGAGNPDPTIDPTYLQTLRQNCPQGGNGNALVDLDPTTADGFDNNYFTNLQ 245
            F NRLFNF G GNPDPT++ T L TL+Q CPQ G+ + + +LD +T D FDNNYF NLQ
Sbjct: 179 VFNNRLFNFSGTGNPDPTLNSTLLSTLQQLCPQNGSASTITNLDLSTPDAFDNNYFANLQ 238

Query: 246 NNRGLLTSDQVLFSTTGAKTVAIVNRFANSQTDFFDTFGQAMIKMGNIRPLTGNNGEIRS 305
           +N GLL SDQ LFSTTG+ T+AIV  FA++QT FF  F Q+MI MGNI PLTG+NGEIR 
Sbjct: 239 SNDGLLQSDQELFSTTGSSTIAIVTSFASNQTLFFQAFAQSMINMGNISPLTGSNGEIRL 298

Query: 306 NCRRINS 312
           +C+++N 
Sbjct: 299 DCKKVNG 305
>d1fhfa_ a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine max) [TaxId: 3847]} Length = 304 Back     information, alignment and structure
>d1gwua_ a.93.1.1 (A:) Plant peroxidase {Horseradish (Armoracia rusticana) [TaxId: 3704]} Length = 307 Back     information, alignment and structure
>d1qgja_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase N [TaxId: 3702]} Length = 300 Back     information, alignment and structure
>d1bgpa_ a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vulgare), peroxidase 1 [TaxId: 4513]} Length = 309 Back     information, alignment and structure
>d1scha_ a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hypogaea) [TaxId: 3818]} Length = 294 Back     information, alignment and structure
>d1llpa_ a.93.1.1 (A:) Fungal peroxidase (ligninase) {White rot basidiomycete (Phanerochaete chrysosporium) [TaxId: 5306]} Length = 343 Back     information, alignment and structure
>d1yyda1 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) {Basidomycetos fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Length = 357 Back     information, alignment and structure
>d2e39a1 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) {Arthromyces ramosus [TaxId: 5451]} Length = 336 Back     information, alignment and structure
>d1oafa_ a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glycine max) [TaxId: 3847]} Length = 250 Back     information, alignment and structure
>d2euta1 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 291 Back     information, alignment and structure
>d1iyna_ a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 275 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query313
d1fhfa_304 Plant peroxidase {Soybean (Glycine max) [TaxId: 38 100.0
d1pa2a_306 Plant peroxidase {Mouse-ear cress (Arabidopsis tha 100.0
d1qgja_300 Plant peroxidase {Mouse-ear cress (Arabidopsis tha 100.0
d1gwua_307 Plant peroxidase {Horseradish (Armoracia rusticana 100.0
d1bgpa_309 Plant peroxidase {Barley (Hordeum vulgare), peroxi 100.0
d1scha_294 Plant peroxidase {Peanut (Arachis hypogaea) [TaxId 100.0
d1iyna_275 Ascorbate peroxidase {Common tobacco (Nicotiana ta 100.0
d1yyda1357 Fungal peroxidase (ligninase) {Basidomycetos fungu 100.0
d1oafa_250 Ascorbate peroxidase {Soybean (Glycine max) [TaxId 100.0
d2e39a1336 Fungal peroxidase (ligninase) {Arthromyces ramosus 100.0
d1llpa_343 Fungal peroxidase (ligninase) {White rot basidiomy 100.0
d2euta1291 Cytochrome c peroxidase, CCP {Baker's yeast (Sacch 100.0
d1mwva2308 Catalase-peroxidase KatG {Burkholderia pseudomalle 100.0
d1itka1406 Catalase-peroxidase KatG {Archaeon Haloarcula mari 100.0
d1mwva1406 Catalase-peroxidase KatG {Burkholderia pseudomalle 100.0
d1u2ka_292 Catalase-peroxidase KatG {Burkholderia pseudomalle 100.0
d2ccaa1410 Catalase-peroxidase KatG {Mycobacterium tuberculos 100.0
d1itka2308 Catalase-peroxidase KatG {Archaeon Haloarcula mari 100.0
d1ub2a2294 Catalase-peroxidase KatG {Synechococcus sp. pcc 79 100.0
d1ub2a1406 Catalase-peroxidase KatG {Synechococcus sp. pcc 79 100.0
d2ccaa2285 Catalase-peroxidase KatG {Mycobacterium tuberculos 100.0
>d1fhfa_ a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine max) [TaxId: 3847]} Back     information, alignment and structure
class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Plant peroxidase
species: Soybean (Glycine max) [TaxId: 3847]

Probab=100.00  E-value=2.2e-100  Score=719.91  Aligned_cols=300  Identities=54%  Similarity=0.933  Sum_probs=289.3

Q ss_pred             CCCcccccCCCccHHHHHHHHHHHHHhcCccchhhHHHHhhhcccccCCCceeecCCCCCCCCCCccCCCCCCCC-Cccc
Q 039981            8 QLSSTFYATTCPNVSSIVRGVVEQARNNDARIGARLIRVHFHDCFVNGCDGSLLLDDSAPGGIQSEKNGNPNLST-GGYE   86 (313)
Q Consensus         8 ~l~~~~Y~~~Cp~~e~~Vr~~v~~~~~~~~~~a~~~lRl~FHDc~~~GcDgSill~~~~~~~~~~E~~~~~N~~l-~g~~   86 (313)
                      ||+.+||++|||++|+|||++|++++.++++++|++|||+||||||+||||||||+++  +++.+|+++++|.++ +||+
T Consensus         1 qL~~~~Y~~sCp~~e~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDgSill~~~--~~~~~E~~~~~N~~~~~g~~   78 (304)
T d1fhfa_           1 QLTPTFYRETCPNLFPIVFGVIFDASFTDPRIGASLMRLHFHDCFVQGCDGSVLLNNT--DTIESEQDALPNINSIRGLD   78 (304)
T ss_dssp             CCBTTTTTTTSTTHHHHHHHHHHHTTSSCTTHHHHHHHHHHHHHTTTCSSSGGGCCCC--SSCCCGGGSTTTTTTCCCHH
T ss_pred             CCCCccccccCcCHHHHHHHHHHHHHHhCCchhHHHHHHHHHhhccCCCCeeEeecCC--CCccccccCCcccccchhHH
Confidence            7999999999999999999999999999999999999999999999999999999977  667789999999987 9999


Q ss_pred             hHHHHHHHHhhcCCCccchHHHHHHhhHhHhhhcCCCceEeeCCCCCCCCCCCcCCC-CCCCCCCCHHHHHHHHHHCCCC
Q 039981           87 VVDDIKTALENVCPGVVSCADILAIASQILVSLDGGPTWQVQLGRRDSRTANLAGTS-GIPLGNETLDRISEKFRAVGLD  165 (313)
Q Consensus        87 ~i~~iK~~le~~cp~~VS~ADiialaa~~av~~~GGP~~~v~~GR~D~~~s~~~~~~-~lP~p~~~~~~l~~~F~~~Gl~  165 (313)
                      +|+.||++||..||++|||||||+||||+||+.+|||.|+|++||+|++++.+..+. +||.|+.++++|+.+|++|||+
T Consensus        79 ~id~iK~~le~~cp~~VScADIlalAardAv~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~  158 (304)
T d1fhfa_          79 VVNDIKTAVENSCPDTVSCADILAIAAEIASVLGGGPGWPVPLGRRDSLTANRTLANQNLPAPFFNLTQLKASFAVQGLN  158 (304)
T ss_dssp             HHHHHHHHHHTTSTTTSCHHHHHHHHHHHHHHTTTCCCCCCCBCCCBCSCCCHHHHHHHSCCTTCCHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHHhhCCCccCHHHHHHHHHhhhhhhcCCCcccccCCCcCcCccccccccccCCCCCCCHHHHHHHHHHcCCC
Confidence            999999999999999999999999999999999999999999999999999876665 8999999999999999999999


Q ss_pred             CccchhhhccccccccccccccccccccCCCCCCCCCCCCHHHHHHHHhcCCCCCCCCCcccCCCCCCCCCChHHHHHHh
Q 039981          166 DPTDLVALSGAHTFGRARCVAFRNRLFNFDGAGNPDPTIDPTYLQTLRQNCPQGGNGNALVDLDPTTADGFDNNYFTNLQ  245 (313)
Q Consensus       166 ~~~elVaL~GaHtiG~~hc~~f~~rl~~~~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~~d~~tp~~FDN~Yy~~l~  245 (313)
                      ++ |||||+||||||++||.+|..|+|+|.+.+.+||.+++.|+..|++.||.++.+.+.+.+|..||.+|||+||++++
T Consensus       159 ~~-d~VaLsGaHTiG~ahc~~~~~rl~~~~~~~~~d~~~~~~~~~~L~~~c~~~~~~~~~~~~d~~tp~~fDn~Yy~~l~  237 (304)
T d1fhfa_         159 TL-DLVTLSGGHTFGRARCSTFINRLYNFSNTGNPDPTLNTTYLEVLRARCPQNATGDNLTNLDLSTPDQFDNRYYSNLL  237 (304)
T ss_dssp             HH-HHHHHGGGGGSCEEEGGGTGGGTSCGGGSSSCCTTSCHHHHHHHHHHSCSSCSSCCEEESCSSSTTSCSTHHHHHHH
T ss_pred             HH-HHHHHhhhhhhcccccccccccccCCCCCCCCCcccCHHHHHHHHHhcCCCCCCCcccccCCCCCCccccHHHHHHh
Confidence            99 99999999999999999999999999998899999999999999999998776667788998999999999999999


Q ss_pred             cCcccccchhhhhccCCh--hHHHHHHHHhcCHHHHHHHHHHHHHHhhcCCCCCCCCCcccccccccCC
Q 039981          246 NNRGLLTSDQVLFSTTGA--KTVAIVNRFANSQTDFFDTFGQAMIKMGNIRPLTGNNGEIRSNCRRINS  312 (313)
Q Consensus       246 ~~~g~l~sD~~L~~~~d~--~t~~~v~~yA~d~~~F~~~Fa~A~~Kms~lgv~tg~~GeiR~~C~~~n~  312 (313)
                      .++|+|+||++|+.  ||  +|+++|++||.||++|+++|++||+||++|||+||.+||||++|+++|.
T Consensus       238 ~~~glL~SD~~L~~--dp~~~t~~~V~~yA~d~~~F~~~F~~Am~Km~~lgv~tg~~GeiR~~C~~~N~  304 (304)
T d1fhfa_         238 QLNGLLQSDQELFS--TPGADTIPIVNSFSSNQNTFFSNFRVSMIKMGNIGVLTGDEGEIRLQCNFVNG  304 (304)
T ss_dssp             TTCCSSHHHHTTTS--STTCSSHHHHHHHHHCHHHHHHHHHHHHHHHTTTTCCCTTSSBCCSBTTBCCC
T ss_pred             hcCcccHhhHHHHh--CCCchHHHHHHHHhhCHHHHHHHHHHHHHHHhcCCCCCCCCCcccCcccCcCC
Confidence            99999999999999  75  7999999999999999999999999999999999999999999999995
>d1pa2a_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase A2 [TaxId: 3702]} Back     information, alignment and structure
>d1qgja_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase N [TaxId: 3702]} Back     information, alignment and structure
>d1gwua_ a.93.1.1 (A:) Plant peroxidase {Horseradish (Armoracia rusticana) [TaxId: 3704]} Back     information, alignment and structure
>d1bgpa_ a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vulgare), peroxidase 1 [TaxId: 4513]} Back     information, alignment and structure
>d1scha_ a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hypogaea) [TaxId: 3818]} Back     information, alignment and structure
>d1iyna_ a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Back     information, alignment and structure
>d1yyda1 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) {Basidomycetos fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Back     information, alignment and structure
>d1oafa_ a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glycine max) [TaxId: 3847]} Back     information, alignment and structure
>d2e39a1 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) {Arthromyces ramosus [TaxId: 5451]} Back     information, alignment and structure
>d1llpa_ a.93.1.1 (A:) Fungal peroxidase (ligninase) {White rot basidiomycete (Phanerochaete chrysosporium) [TaxId: 5306]} Back     information, alignment and structure
>d2euta1 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1mwva2 a.93.1.3 (A:441-748) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d1itka1 a.93.1.3 (A:18-423) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} Back     information, alignment and structure
>d1mwva1 a.93.1.3 (A:35-440) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d1u2ka_ a.93.1.3 (A:) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d2ccaa1 a.93.1.3 (A:26-435) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1itka2 a.93.1.3 (A:424-731) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} Back     information, alignment and structure
>d1ub2a2 a.93.1.3 (A:427-720) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]} Back     information, alignment and structure
>d1ub2a1 a.93.1.3 (A:21-426) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]} Back     information, alignment and structure
>d2ccaa2 a.93.1.3 (A:436-720) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure