Citrus Sinensis ID: 039985
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 357 | 2.2.26 [Sep-21-2011] | |||||||
| Q9C7A2 | 590 | Ankyrin repeat-containing | no | no | 0.456 | 0.276 | 0.287 | 4e-06 |
| >sp|Q9C7A2|Y3236_ARATH Ankyrin repeat-containing protein At3g12360 OS=Arabidopsis thaliana GN=At3g12360 PE=2 SV=1 | Back alignment and function desciption |
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Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 93/216 (43%), Gaps = 53/216 (24%)
Query: 186 LLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSV 245
L AA G E++K ++ + PQ L +++K Q LH+AVK + +V +L+ +
Sbjct: 236 LHLAARQGHVEVIKALLSKDPQ--LARRIDKKGQTALHMAVKGQSSEVVKLLLD----AD 289
Query: 246 PKWASRIDKKGYTLLHHVADMKHYKEG---------------TRP-GPVLQFQEELQLFE 289
P + DK T LH VA K E TR L E L L E
Sbjct: 290 PAIVMQPDKSCNTALH-VATRKKRAEIVELLLSLPDTNANTLTRDHKTALDIAEGLPLSE 348
Query: 290 ---HVKEIMPRHYAMHRDEKN------------------------KMTASDLFNLTHEDQ 322
++KE + R A+ +E N K T ++ N++ E
Sbjct: 349 ESSYIKECLARSGALRANELNQPRDELRSTVTQIKNDVHIQLEQTKRTNKNVHNISKE-- 406
Query: 323 LRKA-QEWIKETSQACSVLAILIATVVFTAAFTIPG 357
LRK +E I + + +V+A+L ATV F A FT+PG
Sbjct: 407 LRKLHREGINNATNSVTVVAVLFATVAFAAIFTVPG 442
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Arabidopsis thaliana (taxid: 3702) |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 357 | ||||||
| 224118134 | 696 | predicted protein [Populus trichocarpa] | 0.476 | 0.244 | 0.520 | 6e-47 | |
| 224116010 | 710 | predicted protein [Populus trichocarpa] | 0.478 | 0.240 | 0.52 | 1e-44 | |
| 224105645 | 702 | predicted protein [Populus trichocarpa] | 0.478 | 0.243 | 0.508 | 7e-42 | |
| 255570917 | 317 | ankyrin repeat-containing protein, putat | 0.470 | 0.529 | 0.5 | 1e-41 | |
| 224115980 | 595 | predicted protein [Populus trichocarpa] | 0.470 | 0.282 | 0.505 | 6e-39 | |
| 224136572 | 650 | predicted protein [Populus trichocarpa] | 0.473 | 0.26 | 0.463 | 8e-38 | |
| 224136568 | 409 | predicted protein [Populus trichocarpa] | 0.473 | 0.413 | 0.463 | 1e-37 | |
| 224115936 | 802 | predicted protein [Populus trichocarpa] | 0.470 | 0.209 | 0.505 | 2e-37 | |
| 224170552 | 195 | predicted protein [Populus trichocarpa] | 0.470 | 0.861 | 0.482 | 2e-36 | |
| 224115952 | 867 | predicted protein [Populus trichocarpa] | 0.635 | 0.261 | 0.395 | 2e-36 |
| >gi|224118134|ref|XP_002331567.1| predicted protein [Populus trichocarpa] gi|222873791|gb|EEF10922.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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Score = 194 bits (493), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 90/173 (52%), Positives = 125/173 (72%), Gaps = 3/173 (1%)
Query: 185 TLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLS 244
+LL A SNGI EI+KEI+ +PQA+ ++++ K QNI+HVA+K RQ ++F ++ K+M++
Sbjct: 376 SLLLATSNGIVEIVKEILDVYPQAV--EHVSRKGQNIMHVAIKNRQKEIFNMV-KKMEIP 432
Query: 245 VPKWASRIDKKGYTLLHHVADMKHYKEGTRPGPVLQFQEELQLFEHVKEIMPRHYAMHRD 304
+ + RIDK GYTLLHHVA M +Y GT PGP LQ QEEL F+ V++I+P HY MHR
Sbjct: 433 MTRLVRRIDKNGYTLLHHVAVMHYYSGGTLPGPALQLQEELHWFDRVRKIIPPHYEMHRS 492
Query: 305 EKNKMTASDLFNLTHEDQLRKAQEWIKETSQACSVLAILIATVVFTAAFTIPG 357
TA + F TH L++AQEW+K TS++CS +A+LIATV F AA+T+PG
Sbjct: 493 RYKDKTAQEFFKKTHTKLLKEAQEWLKRTSESCSTVAVLIATVAFAAAYTVPG 545
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224116010|ref|XP_002317184.1| predicted protein [Populus trichocarpa] gi|222860249|gb|EEE97796.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 91/175 (52%), Positives = 128/175 (73%), Gaps = 4/175 (2%)
Query: 183 RLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQ 242
++ L A NGI EI+ EI+ +P A+ + LN+K Q+IL VAV RQ ++F L+ K+ +
Sbjct: 388 QIPLFLATRNGIEEIVWEIMKLYPHAV--EKLNDKGQSILDVAVIHRQKRIFNLV-KQQR 444
Query: 243 LSVPKWASRIDKKGYTLLHHVADMKHYKEGTRPGPVLQFQEELQLFEHVKEIMPRHYAMH 302
+ + + IDKKG TLLHHVADM+HY+ GT+PGP L+ QEELQ FE V+E++P HY
Sbjct: 445 IPLARLQRVIDKKGNTLLHHVADMEHYRGGTKPGPALKLQEELQWFEQVREVIPSHYVTL 504
Query: 303 RDEKNKMTASDLFNLTHEDQLRKAQEWIKETSQACSVLAILIATVVFTAAFTIPG 357
R+++ K TA +LF +H+DQL AQ+WIKET+Q+CS +A L+ATVVF AA+T+PG
Sbjct: 505 RNDEGK-TAEELFKESHKDQLENAQKWIKETTQSCSTVAALVATVVFAAAYTVPG 558
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224105645|ref|XP_002333787.1| predicted protein [Populus trichocarpa] gi|222838519|gb|EEE76884.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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Score = 177 bits (449), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 89/175 (50%), Positives = 123/175 (70%), Gaps = 4/175 (2%)
Query: 183 RLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQ 242
++ LL A NGI EI+ EII +P A+ + LN+K Q+IL VAV RQ ++F L+ K+ +
Sbjct: 376 QIPLLLATRNGIEEIVWEIIKLYPHAV--EKLNDKGQSILDVAVIHRQKEIFNLV-KQQR 432
Query: 243 LSVPKWASRIDKKGYTLLHHVADMKHYKEGTRPGPVLQFQEELQLFEHVKEIMPRHYAMH 302
+ + + IDKKG TLLHHVAD Y+ GT+PGP Q Q+ELQ FE V+E++P HY
Sbjct: 433 IPLARLHRNIDKKGNTLLHHVADTSQYRGGTKPGPAHQLQDELQWFEQVREVVPSHYVTL 492
Query: 303 RDEKNKMTASDLFNLTHEDQLRKAQEWIKETSQACSVLAILIATVVFTAAFTIPG 357
R+++ K TA +LF +HEDQL A+ WIKET+Q+CS +A L+AT VF AA+T+PG
Sbjct: 493 RNDEGK-TAEELFIESHEDQLNSARTWIKETTQSCSTVAALVATFVFAAAYTVPG 546
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255570917|ref|XP_002526410.1| ankyrin repeat-containing protein, putative [Ricinus communis] gi|223534272|gb|EEF35986.1| ankyrin repeat-containing protein, putative [Ricinus communis] | Back alignment and taxonomy information |
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Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 86/172 (50%), Positives = 126/172 (73%), Gaps = 4/172 (2%)
Query: 186 LLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSV 245
LL A+SNGI EI++EI+ ++PQA+ ++++++ QNILHVAVK R+ ++F + K+M++ +
Sbjct: 59 LLIASSNGIIEIVEEILQEYPQAV--EHVSDQGQNILHVAVKHRKKEIFRRV-KKMKIPM 115
Query: 246 PKWASRIDKKGYTLLHHVADMKHYKEGTRPGPVLQFQEELQLFEHVKEIMPRHYAMHRDE 305
++D GYTLLHH ADM +Y G +P PVLQ QEEL+ +E VK+I+P HY MH +
Sbjct: 116 AILVRKMDINGYTLLHHAADMHNYFGGYKPSPVLQLQEELRWYERVKKIIPSHYIMHHNG 175
Query: 306 KNKMTASDLFNLTHEDQLRKAQEWIKETSQACSVLAILIATVVFTAAFTIPG 357
+ TA +LF TH + AQEW+K TS++CSV+A+LIATV FTA +T+PG
Sbjct: 176 YGQ-TALELFEETHSKLHKDAQEWLKRTSESCSVIAVLIATVAFTAIYTVPG 226
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224115980|ref|XP_002317176.1| predicted protein [Populus trichocarpa] gi|222860241|gb|EEE97788.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 167 bits (423), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 87/172 (50%), Positives = 117/172 (68%), Gaps = 4/172 (2%)
Query: 186 LLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSV 245
L A GI EI++ II HP AI D +E ++IL VAV RQ K+F+++ KE ++ +
Sbjct: 284 LFTATRRGIEEIVELIIALHPYAI--DQRDEMNRSILDVAVMYRQKKIFDIV-KEQKIPM 340
Query: 246 PKWASRIDKKGYTLLHHVADMKHYKEGTRPGPVLQFQEELQLFEHVKEIMPRHYAMHRDE 305
+ +D +G TLLHHVADMK E T+PGP LQ QEEL+ FE V+E++P +Y +
Sbjct: 341 ARMRRFVDNRGNTLLHHVADMKKNSEVTKPGPALQLQEELKWFERVQEVIPSYYVPLLN- 399
Query: 306 KNKMTASDLFNLTHEDQLRKAQEWIKETSQACSVLAILIATVVFTAAFTIPG 357
K+ MTA + F + HE QL KAQ WIKETSQ+CS +A L+ATVVF AA+T+PG
Sbjct: 400 KDGMTARECFEIAHEKQLEKAQIWIKETSQSCSTVAALVATVVFAAAYTVPG 451
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224136572|ref|XP_002322363.1| predicted protein [Populus trichocarpa] gi|222869359|gb|EEF06490.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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Score = 164 bits (414), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 83/179 (46%), Positives = 120/179 (67%), Gaps = 10/179 (5%)
Query: 186 LLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSV 245
L A SNGI EI KEI+ + PQ I L +N++ QNILHVAV R+ ++F L+ K+ + V
Sbjct: 324 LFIATSNGIVEIAKEILAKFPQGIEL--VNDEGQNILHVAVMHRRREIFRLVKKK-NIIV 380
Query: 246 PKWASRIDKKGYTLLHHVADMKHYKEGTRPGPVLQFQEELQLFEHVKEIMPRHYAMHR-- 303
+ ++ +D G+TLLH VA +KHY G +PGP LQ QEE++ F+ V+ ++P + R
Sbjct: 381 TRMSTSVDNNGFTLLHQVAHVKHYSGGAKPGPALQLQEEIKWFKRVQRVVPPSLSEQRVQ 440
Query: 304 -----DEKNKMTASDLFNLTHEDQLRKAQEWIKETSQACSVLAILIATVVFTAAFTIPG 357
D+ TA +LF H+ QL+ AQ+WI++TSQ+CS +A+L+ATVVF AA+TIPG
Sbjct: 441 WVVPNDKNYNFTAFELFQEEHKGQLKLAQDWIEKTSQSCSAVAVLLATVVFAAAYTIPG 499
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224136568|ref|XP_002322362.1| predicted protein [Populus trichocarpa] gi|222869358|gb|EEF06489.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 83/179 (46%), Positives = 120/179 (67%), Gaps = 10/179 (5%)
Query: 186 LLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSV 245
L A SNGI EI KEI+ + PQ I L +N++ QNILHVAV R+ ++F L+ K+ + V
Sbjct: 83 LFIATSNGIVEIAKEILAKFPQGIEL--VNDEGQNILHVAVMHRRREIFRLVKKK-NIIV 139
Query: 246 PKWASRIDKKGYTLLHHVADMKHYKEGTRPGPVLQFQEELQLFEHVKEIMPRHYAMHR-- 303
+ ++ +D G+TLLH VA +KHY G +PGP LQ QEE++ F+ V+ ++P + R
Sbjct: 140 TRMSTSVDNNGFTLLHQVAHVKHYSGGAKPGPALQLQEEIKWFKRVQRVVPPSLSEQRVQ 199
Query: 304 -----DEKNKMTASDLFNLTHEDQLRKAQEWIKETSQACSVLAILIATVVFTAAFTIPG 357
D+ TA +LF H+ QL+ AQ+WI++TSQ+CS +A+L+ATVVF AA+TIPG
Sbjct: 200 WVVPNDKNYNFTAFELFQEEHKGQLKLAQDWIEKTSQSCSAVAVLLATVVFAAAYTIPG 258
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224115936|ref|XP_002317165.1| predicted protein [Populus trichocarpa] gi|222860230|gb|EEE97777.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 87/172 (50%), Positives = 116/172 (67%), Gaps = 4/172 (2%)
Query: 186 LLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSV 245
L A GI EI+K I HP AI D +E ++IL VAV RQ K+F+++ KE ++ +
Sbjct: 479 LFTATRRGIQEIVKLKIKLHPHAI--DQRDEMNRSILDVAVMYRQKKIFDIV-KEKEIQM 535
Query: 246 PKWASRIDKKGYTLLHHVADMKHYKEGTRPGPVLQFQEELQLFEHVKEIMPRHYAMHRDE 305
+ +DK G TLLHHVADMK T+PGP LQ QEEL+ FE VKE +P HY +
Sbjct: 536 ARMRRVVDKSGNTLLHHVADMKKNSGVTKPGPALQLQEELKWFERVKEEIPPHYVPLLN- 594
Query: 306 KNKMTASDLFNLTHEDQLRKAQEWIKETSQACSVLAILIATVVFTAAFTIPG 357
K+ MTA + F +HE QL++AQ+WIKET+Q+CS +A L+ATVVF AA+T+PG
Sbjct: 595 KDGMTARECFENSHEMQLKQAQKWIKETAQSCSTVAALVATVVFAAAYTVPG 646
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224170552|ref|XP_002339390.1| predicted protein [Populus trichocarpa] gi|222875012|gb|EEF12143.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/172 (48%), Positives = 115/172 (66%), Gaps = 4/172 (2%)
Query: 186 LLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSV 245
L A GI +I++ II HP AI D +E ++IL VAV RQ K+F+++ K ++ +
Sbjct: 28 LFTATRRGIEKIVELIIRLHPHAI--DQRDEMNRSILDVAVMYRQEKIFDIV-KGKKIPL 84
Query: 246 PKWASRIDKKGYTLLHHVADMKHYKEGTRPGPVLQFQEELQLFEHVKEIMPRHYAMHRDE 305
+ +D G TLLHHVADMK T+PGP LQ QEEL+ FE V++++P +Y +
Sbjct: 85 ARMRRVVDNSGNTLLHHVADMKKNSGVTKPGPALQLQEELKWFERVQDVIPSYYVPLLN- 143
Query: 306 KNKMTASDLFNLTHEDQLRKAQEWIKETSQACSVLAILIATVVFTAAFTIPG 357
K+ MTA + F + HE QL+KAQ WIKETSQ+CS +A L+ATVVF AA+T+PG
Sbjct: 144 KDGMTAREYFEIAHEKQLKKAQTWIKETSQSCSTVAALVATVVFAAAYTVPG 195
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224115952|ref|XP_002317169.1| predicted protein [Populus trichocarpa] gi|222860234|gb|EEE97781.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 97/245 (39%), Positives = 141/245 (57%), Gaps = 18/245 (7%)
Query: 125 AGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNWAI-- 182
G L+ L + K C KG + +K V A E +K+D ++K V + + A
Sbjct: 595 GGLLNYLKIPKVCWLKGIWDQKRKHV--FALRFAESLIKEDKSLKEVQTSETQRLPAQTS 652
Query: 183 ----------RLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYK 232
+ L A G +I+K II HPQAI D +E ++IL VAV RQ K
Sbjct: 653 VTMSSLTTKKEIPLFTATRRGTEKIVKLIIRLHPQAI--DQRDEMNRSILDVAVMYRQKK 710
Query: 233 VFELITKEMQLSVPKWASRIDKKGYTLLHHVADMKHYKEGTRPGPVLQFQEELQLFEHVK 292
+F+ + K+ ++ + +D +LLHHVAD+ T+PGP LQ QEELQ FE V+
Sbjct: 711 IFDFV-KQQEIPFARLRRVVDNSNNSLLHHVADVNQNSGVTKPGPALQLQEELQWFEQVQ 769
Query: 293 EIMPRHYAMHRDEKNKMTASDLFNLTHEDQLRKAQEWIKETSQACSVLAILIATVVFTAA 352
E++P HY ++ K TA + F ++H++QL+KAQ+WIKETSQ+CS +A L+ATVVF AA
Sbjct: 770 EVIPDHYVPLLNDDGK-TARECFEISHKEQLKKAQKWIKETSQSCSTVAALVATVVFAAA 828
Query: 353 FTIPG 357
+T+PG
Sbjct: 829 YTVPG 833
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 357 | ||||||
| TAIR|locus:2165174 | 347 | AT5G35810 "AT5G35810" [Arabido | 0.470 | 0.484 | 0.365 | 1.3e-20 | |
| TAIR|locus:2080240 | 574 | AT3G54070 "AT3G54070" [Arabido | 0.467 | 0.290 | 0.397 | 1.2e-19 | |
| TAIR|locus:2180228 | 625 | AT5G04690 "AT5G04690" [Arabido | 0.487 | 0.278 | 0.313 | 1e-14 | |
| TAIR|locus:2175413 | 669 | AT5G04700 "AT5G04700" [Arabido | 0.495 | 0.264 | 0.313 | 2.9e-14 | |
| TAIR|locus:2175448 | 603 | AT5G04730 "AT5G04730" [Arabido | 0.540 | 0.320 | 0.301 | 6e-14 | |
| TAIR|locus:2128791 | 683 | AT4G03470 [Arabidopsis thalian | 0.492 | 0.257 | 0.282 | 1.4e-05 | |
| TAIR|locus:2092522 | 590 | ITN1 "INCREASED TOLERANCE TO N | 0.675 | 0.408 | 0.247 | 0.00043 |
| TAIR|locus:2165174 AT5G35810 "AT5G35810" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 243 (90.6 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 64/175 (36%), Positives = 100/175 (57%)
Query: 186 LLF-AASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLS 244
LLF AA +G E+L +I +P L+ ++ K Q++ H+A R K+F I E+
Sbjct: 34 LLFDAAQSGNLELLLILIRSYPD--LIWTVDHKNQSLFHIAAINRHEKIFNRIY-ELGAI 90
Query: 245 VPKWASRIDKKGY-TLLHHVADMKHYKE-GTRPGPVLQFQEELQLFEHVKEIMPRHYAMH 302
A +K+ LLH VA + G LQ Q E+ ++ VKEI+PR Y
Sbjct: 91 KDLIAMYKEKESNDNLLHLVARLPPPNRLQVVSGAALQMQREILWYKAVKEIVPRVYIKT 150
Query: 303 RDEKNKMTASDLFNLTHEDQLRKAQEWIKETSQACSVLAILIATVVFTAAFTIPG 357
+++K ++ A DLF H++ ++ ++W+KET+ AC +++ LIATVVF AAFT+PG
Sbjct: 151 KNKKEEV-AHDLFTKEHDNLRKEGEKWMKETATACILVSTLIATVVFAAAFTLPG 204
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|
| TAIR|locus:2080240 AT3G54070 "AT3G54070" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 242 (90.2 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 70/176 (39%), Positives = 98/176 (55%)
Query: 186 LLF-AASNGITEILKEIIHQHPQAI-LLDNLNEKEQNILHVAVKRRQYKVFELITKEMQL 243
LLF AA G EIL +I H + ++DN N + + HVA R +F LI E+
Sbjct: 258 LLFDAAELGNVEILVILIRSHLDLLWIVDNNN---RTLFHVAALYRHENIFSLIY-ELGG 313
Query: 244 SVPKWASRIDKKGY-TLLHHVADMKHY-KEGTRPGPVLQFQEELQLFEHVKEIMPRHYAM 301
AS +K+ TLLH VA + ++ G L Q+EL F+ VKEI+PR Y
Sbjct: 314 IKDLIASYKEKQSKDTLLHLVARLPPMNRQQVGSGAALHMQKELLWFKAVKEIVPRSYIE 373
Query: 302 HRDEKNKMTASDLFNLTHEDQLRKAQEWIKETSQACSVLAILIATVVFTAAFTIPG 357
++ K ++ A D+F HE+ ++ + W+KET+ AC + A LIATVVF AA TIPG
Sbjct: 374 TKNTKGEL-AHDIFTEQHENLRKEGERWMKETATACMLGATLIATVVFAAAITIPG 428
|
|
| TAIR|locus:2180228 AT5G04690 "AT5G04690" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 209 (78.6 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 58/185 (31%), Positives = 94/185 (50%)
Query: 176 KDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFE 235
K+++ ++ LLFA G + L E+I + + + + + + AV+ RQ KVF
Sbjct: 314 KERSESVDEALLFAVRYGNVDFLVEMIKNNSELLWSTGTS----TLFNTAVQVRQEKVFS 369
Query: 236 LITKEMQLSVPKWASRIDKK--GYTLLHHVA-DMKHYKEGTRPGPVLQFQEELQLFEHVK 292
L+ L K+ DK G ++LH +YK T LQ Q ELQ F+ ++
Sbjct: 370 LL---YGLGDRKYLFLADKDSDGNSVLHLAGYPPPNYKLATVVSATLQMQRELQWFKEME 426
Query: 293 EIMPRHYAMHRDEKNKMTASDLFNLTHEDQLRKAQEWIKETSQACSVLAILIATVVFTAA 352
I+P R +T ++F HE +A++W+K+T+ +CS++A LI TV F A
Sbjct: 427 RIVPA-IENERVNTENLTPIEIFRKEHEAMRLEAEKWMKDTAMSCSLVAALIVTVTFAAI 485
Query: 353 FTIPG 357
FT+PG
Sbjct: 486 FTVPG 490
|
|
| TAIR|locus:2175413 AT5G04700 "AT5G04700" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 206 (77.6 bits), Expect = 2.9e-14, P = 2.9e-14
Identities = 58/185 (31%), Positives = 91/185 (49%)
Query: 176 KDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFE 235
K+++ + LLFA G + L E+I + + +L + +AV+ RQ KVF
Sbjct: 353 KERSETVDEALLFAVRYGNVDFLVEMIRNNSE-LLWSTRTSSSSTLFLLAVEFRQEKVFS 411
Query: 236 LITKEMQLSVPKWASRIDKK--GYTLLHHVA-DMKHYKEGTRPGPVLQFQEELQLFEHVK 292
L+ L K+ DK G +LH K + G LQ Q ELQ F+ V+
Sbjct: 412 LL---YGLDDRKYLLLADKDCDGNGVLHLAGFPSPPSKLSSVVGAPLQLQRELQWFKEVE 468
Query: 293 EIMPRHYAMHRDEKNKMTASDLFNLTHEDQLRKAQEWIKETSQACSVLAILIATVVFTAA 352
I P R + T ++F H+ ++A++W+K+T+ +CS++A LI TV F A
Sbjct: 469 RIAPE-IEKERVNTEEQTPIEIFTKEHQGLRQEAEKWMKDTAMSCSLVAALIVTVTFAAV 527
Query: 353 FTIPG 357
FT+PG
Sbjct: 528 FTVPG 532
|
|
| TAIR|locus:2175448 AT5G04730 "AT5G04730" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 203 (76.5 bits), Expect = 6.0e-14, P = 6.0e-14
Identities = 60/199 (30%), Positives = 98/199 (49%)
Query: 162 VKKDCTIKGVPNHKKDKNW--AIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQ 219
+K+ CT K + W + LL AA +G + EII + Q + + N +
Sbjct: 272 LKQMCTSLRDIMAKNEIRWKETVYEALLEAAKSGNRDFFIEIIKCNSQLLWILNPTSG-R 330
Query: 220 NILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTLLHHVADMKHYKEGTR-PGPV 278
N+ +AV+ ++ K+F LI V S DK +LH + + ++ G
Sbjct: 331 NLFQLAVEFKKEKIFNLIHGLDDRKVTLLRS-YDKGNNNILHIAGRLSTPDQLSKISGAA 389
Query: 279 LQFQEELQLFEHVKEIMPRHYAMHRDEKNKMTASDLFNLTHEDQLRKAQEWIKETSQACS 338
L+ Q E Q F+ V+ ++ + +++ NK T +F HE ++ +EW+K T+ ACS
Sbjct: 390 LKMQRESQWFKEVESLVSEREVVQKNKDNK-TPRQIFEHYHEHLRKEGEEWMKYTATACS 448
Query: 339 VLAILIATVVFTAAFTIPG 357
+A LIATV F A FT+PG
Sbjct: 449 FVAALIATVTFQAIFTVPG 467
|
|
| TAIR|locus:2128791 AT4G03470 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 132 (51.5 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 58/205 (28%), Positives = 95/205 (46%)
Query: 169 KGVPNHKKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKR 228
KGV D ++ I L A G +++KEI + P + LL LN+K QN+LH+A +
Sbjct: 329 KGVFVCDDDGSYPIHL----AVEKGRIKVVKEICKRCPYSKLL--LNKKGQNLLHIAAES 382
Query: 229 RQYKVFELITKEMQLSVPKWASRIDKKGYTLLHHVADM----KHYKE-GTRPGPVLQFQE 283
++++ +T Q++ A+ D G T LH +A + + +E G + ++Q
Sbjct: 383 GKFRILRHLTAHEQIN--HLANEKDVDGNTPLH-LATIYWRPRAVRELGGKKNLLIQNNN 439
Query: 284 ELQLFEHVKEIMPRHYAMHRDEKNKMTASDLFNLTHEDQLRKAQEWI-----------KE 332
L + + + HY + ++T L L ++ R A I K+
Sbjct: 440 GLVALDIAESKLQPHYIF----RERLTLLALVQLHFQNDPRCAHTMIQTRPIMPQGGNKD 495
Query: 333 TSQACSVLAILIATVVFTAAFTIPG 357
A V+A LI TV FT+ FTIPG
Sbjct: 496 YINALLVVAALITTVTFTSGFTIPG 520
|
|
| TAIR|locus:2092522 ITN1 "INCREASED TOLERANCE TO NACL" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 118 (46.6 bits), Expect = 0.00043, P = 0.00043
Identities = 68/275 (24%), Positives = 126/275 (45%)
Query: 94 SSTTSPANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFS 153
S T P+N + + +G+ +L+ AG L E+ NK + A +
Sbjct: 191 SQTFGPSNATPLVSAAMRGHTEVVNQLLS-KAGNLLEI---SRSNNKNALHLAARQ---G 243
Query: 154 AAELVELFVKKDCTIKGVPNHKKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDN 213
E+++ + KD + + DK L + A +E++K ++ P AI++
Sbjct: 244 HVEVIKALLSKDPQLA----RRIDKKGQTALHM--AVKGQSSEVVKLLLDADP-AIVMQP 296
Query: 214 LNEKEQNI-LHVAVKRRQYKVFELITKEMQLSVPKW-ASRIDKKGYTLLH-----HVADM 266
+K N LHVA ++++ ++ EL+ LS+P A+ + + T L +++
Sbjct: 297 --DKSCNTALHVATRKKRAEIVELL-----LSLPDTNANTLTRDHKTALDIAEGLPLSEE 349
Query: 267 KHY-KEGTRPGPVLQFQEELQLFEHVKEIMPR-HYAMHRD-EKNKMTASDLFNLTHEDQL 323
Y KE L+ E Q + ++ + + +H E+ K T ++ N++ E L
Sbjct: 350 SSYIKECLARSGALRANELNQPRDELRSTVTQIKNDVHIQLEQTKRTNKNVHNISKE--L 407
Query: 324 RKA-QEWIKETSQACSVLAILIATVVFTAAFTIPG 357
RK +E I + + +V+A+L ATV F A FT+PG
Sbjct: 408 RKLHREGINNATNSVTVVAVLFATVAFAAIFTVPG 442
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.134 0.392 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 357 303 0.00097 115 3 11 22 0.39 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 7
No. of states in DFA: 608 (65 KB)
Total size of DFA: 218 KB (2120 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 26.02u 0.10s 26.12t Elapsed: 00:00:01
Total cpu time: 26.02u 0.10s 26.12t Elapsed: 00:00:01
Start: Thu May 9 21:26:07 2013 End: Thu May 9 21:26:08 2013
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 357 | |||
| pfam13962 | 114 | pfam13962, PGG, Domain of unknown function | 5e-11 | |
| cd00204 | 126 | cd00204, ANK, ankyrin repeats; ankyrin repeats med | 2e-05 | |
| cd00204 | 126 | cd00204, ANK, ankyrin repeats; ankyrin repeats med | 3e-04 |
| >gnl|CDD|222475 pfam13962, PGG, Domain of unknown function | Back alignment and domain information |
|---|
Score = 59.1 bits (144), Expect = 5e-11
Identities = 16/31 (51%), Positives = 21/31 (67%)
Query: 327 QEWIKETSQACSVLAILIATVVFTAAFTIPG 357
EW+++T + V+A LIATV F A FT PG
Sbjct: 1 SEWLEKTRNSLLVVATLIATVTFAAGFTPPG 31
|
The PGG domain is named for the highly conserved sequence motif found at the startt of the domain. The function is not known. Length = 114 |
| >gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins | Back alignment and domain information |
|---|
Score = 43.1 bits (102), Expect = 2e-05
Identities = 30/114 (26%), Positives = 45/114 (39%), Gaps = 17/114 (14%)
Query: 156 ELVELFVKKDCTIKGVPNHKKDKNWAIRLTLL-FAASNGITEILKEIIHQHPQAILLDNL 214
E+V+L ++ G + KD + T L AA NG EI+K ++ + D
Sbjct: 21 EVVKLLLEN-----GADVNAKDND---GRTPLHLAAKNGHLEIVKLLLEKGADVNARDKD 72
Query: 215 NEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTLLHHVADMKH 268
LH+A + V +L+ L + DK G T LH A H
Sbjct: 73 G---NTPLHLAARNGNLDVVKLL-----LKHGADVNARDKDGRTPLHLAAKNGH 118
|
The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126 |
| >gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins | Back alignment and domain information |
|---|
Score = 40.1 bits (94), Expect = 3e-04
Identities = 23/85 (27%), Positives = 35/85 (41%), Gaps = 8/85 (9%)
Query: 186 LLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSV 245
L AASNG E++K ++ DN + LH+A K ++ +L+ L
Sbjct: 11 LHLAASNGHLEVVKLLLENGADVNAKDNDG---RTPLHLAAKNGHLEIVKLL-----LEK 62
Query: 246 PKWASRIDKKGYTLLHHVADMKHYK 270
+ DK G T LH A +
Sbjct: 63 GADVNARDKDGNTPLHLAARNGNLD 87
|
The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 357 | |||
| KOG4412 | 226 | consensus 26S proteasome regulatory complex, subun | 100.0 | |
| KOG0509 | 600 | consensus Ankyrin repeat and DHHC-type Zn-finger d | 100.0 | |
| PHA02791 | 284 | ankyrin-like protein; Provisional | 99.98 | |
| PHA03095 | 471 | ankyrin-like protein; Provisional | 99.97 | |
| PHA02874 | 434 | ankyrin repeat protein; Provisional | 99.97 | |
| KOG4412 | 226 | consensus 26S proteasome regulatory complex, subun | 99.97 | |
| PHA02946 | 446 | ankyin-like protein; Provisional | 99.97 | |
| KOG0510 | 929 | consensus Ankyrin repeat protein [General function | 99.97 | |
| PHA02875 | 413 | ankyrin repeat protein; Provisional | 99.97 | |
| PHA02878 | 477 | ankyrin repeat protein; Provisional | 99.97 | |
| KOG0509 | 600 | consensus Ankyrin repeat and DHHC-type Zn-finger d | 99.97 | |
| PHA02716 | 764 | CPXV016; CPX019; EVM010; Provisional | 99.97 | |
| PHA02946 | 446 | ankyin-like protein; Provisional | 99.97 | |
| PHA02874 | 434 | ankyrin repeat protein; Provisional | 99.97 | |
| PHA02791 | 284 | ankyrin-like protein; Provisional | 99.97 | |
| PHA03100 | 480 | ankyrin repeat protein; Provisional | 99.96 | |
| PHA02875 | 413 | ankyrin repeat protein; Provisional | 99.96 | |
| PHA02876 | 682 | ankyrin repeat protein; Provisional | 99.96 | |
| PHA02859 | 209 | ankyrin repeat protein; Provisional | 99.96 | |
| PHA02876 | 682 | ankyrin repeat protein; Provisional | 99.96 | |
| PHA03100 | 480 | ankyrin repeat protein; Provisional | 99.96 | |
| KOG0510 | 929 | consensus Ankyrin repeat protein [General function | 99.95 | |
| PHA02989 | 494 | ankyrin repeat protein; Provisional | 99.95 | |
| PHA03095 | 471 | ankyrin-like protein; Provisional | 99.95 | |
| PHA02878 | 477 | ankyrin repeat protein; Provisional | 99.95 | |
| PHA02798 | 489 | ankyrin-like protein; Provisional | 99.94 | |
| KOG0508 | 615 | consensus Ankyrin repeat protein [General function | 99.94 | |
| PHA02716 | 764 | CPXV016; CPX019; EVM010; Provisional | 99.94 | |
| PHA02859 | 209 | ankyrin repeat protein; Provisional | 99.94 | |
| PHA02798 | 489 | ankyrin-like protein; Provisional | 99.93 | |
| PHA02989 | 494 | ankyrin repeat protein; Provisional | 99.93 | |
| PHA02795 | 437 | ankyrin-like protein; Provisional | 99.93 | |
| PLN03192 | 823 | Voltage-dependent potassium channel; Provisional | 99.92 | |
| PHA02917 | 661 | ankyrin-like protein; Provisional | 99.92 | |
| KOG0508 | 615 | consensus Ankyrin repeat protein [General function | 99.92 | |
| KOG4177 | 1143 | consensus Ankyrin [Cell wall/membrane/envelope bio | 99.92 | |
| KOG0507 | 854 | consensus CASK-interacting adaptor protein (caskin | 99.91 | |
| KOG4177 | 1143 | consensus Ankyrin [Cell wall/membrane/envelope bio | 99.91 | |
| PHA02917 | 661 | ankyrin-like protein; Provisional | 99.91 | |
| KOG0502 | 296 | consensus Integral membrane ankyrin-repeat protein | 99.9 | |
| PLN03192 | 823 | Voltage-dependent potassium channel; Provisional | 99.89 | |
| PHA02743 | 166 | Viral ankyrin protein; Provisional | 99.89 | |
| PHA02730 | 672 | ankyrin-like protein; Provisional | 99.88 | |
| PHA02792 | 631 | ankyrin-like protein; Provisional | 99.88 | |
| PHA02795 | 437 | ankyrin-like protein; Provisional | 99.88 | |
| KOG0514 | 452 | consensus Ankyrin repeat protein [General function | 99.88 | |
| KOG0502 | 296 | consensus Integral membrane ankyrin-repeat protein | 99.88 | |
| TIGR00870 | 743 | trp transient-receptor-potential calcium channel p | 99.87 | |
| PHA02741 | 169 | hypothetical protein; Provisional | 99.87 | |
| PHA02741 | 169 | hypothetical protein; Provisional | 99.86 | |
| KOG0505 | 527 | consensus Myosin phosphatase, regulatory subunit [ | 99.86 | |
| PHA02736 | 154 | Viral ankyrin protein; Provisional | 99.86 | |
| KOG0512 | 228 | consensus Fetal globin-inducing factor (contains a | 99.86 | |
| PHA02884 | 300 | ankyrin repeat protein; Provisional | 99.86 | |
| KOG0512 | 228 | consensus Fetal globin-inducing factor (contains a | 99.85 | |
| PHA02743 | 166 | Viral ankyrin protein; Provisional | 99.85 | |
| KOG0514 | 452 | consensus Ankyrin repeat protein [General function | 99.85 | |
| PHA02884 | 300 | ankyrin repeat protein; Provisional | 99.84 | |
| PHA02736 | 154 | Viral ankyrin protein; Provisional | 99.84 | |
| PHA02730 | 672 | ankyrin-like protein; Provisional | 99.82 | |
| KOG0505 | 527 | consensus Myosin phosphatase, regulatory subunit [ | 99.82 | |
| KOG0195 | 448 | consensus Integrin-linked kinase [Signal transduct | 99.8 | |
| KOG0195 | 448 | consensus Integrin-linked kinase [Signal transduct | 99.8 | |
| TIGR00870 | 743 | trp transient-receptor-potential calcium channel p | 99.79 | |
| PF12796 | 89 | Ank_2: Ankyrin repeats (3 copies); InterPro: IPR02 | 99.76 | |
| KOG0507 | 854 | consensus CASK-interacting adaptor protein (caskin | 99.75 | |
| cd00204 | 126 | ANK ankyrin repeats; ankyrin repeats mediate prote | 99.74 | |
| KOG4369 | 2131 | consensus RTK signaling protein MASK/UNC-44 [Signa | 99.73 | |
| PF12796 | 89 | Ank_2: Ankyrin repeats (3 copies); InterPro: IPR02 | 99.73 | |
| cd00204 | 126 | ANK ankyrin repeats; ankyrin repeats mediate prote | 99.71 | |
| KOG3676 | 782 | consensus Ca2+-permeable cation channel OSM-9 and | 99.7 | |
| PHA02792 | 631 | ankyrin-like protein; Provisional | 99.7 | |
| KOG4369 | 2131 | consensus RTK signaling protein MASK/UNC-44 [Signa | 99.63 | |
| KOG4214 | 117 | consensus Myotrophin and similar proteins [Transcr | 99.63 | |
| COG0666 | 235 | Arp FOG: Ankyrin repeat [General function predicti | 99.61 | |
| COG0666 | 235 | Arp FOG: Ankyrin repeat [General function predicti | 99.59 | |
| KOG4214 | 117 | consensus Myotrophin and similar proteins [Transcr | 99.58 | |
| KOG3676 | 782 | consensus Ca2+-permeable cation channel OSM-9 and | 99.57 | |
| PTZ00322 | 664 | 6-phosphofructo-2-kinase/fructose-2,6-biphosphatas | 99.57 | |
| PF13637 | 54 | Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A | 99.53 | |
| KOG1710 | 396 | consensus MYND Zn-finger and ankyrin repeat protei | 99.49 | |
| PF13857 | 56 | Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A | 99.48 | |
| PF13857 | 56 | Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A | 99.47 | |
| KOG0515 | 752 | consensus p53-interacting protein 53BP/ASPP, conta | 99.45 | |
| PTZ00322 | 664 | 6-phosphofructo-2-kinase/fructose-2,6-biphosphatas | 99.45 | |
| PF13637 | 54 | Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A | 99.43 | |
| KOG1710 | 396 | consensus MYND Zn-finger and ankyrin repeat protei | 99.35 | |
| KOG0515 | 752 | consensus p53-interacting protein 53BP/ASPP, conta | 99.33 | |
| PF13606 | 30 | Ank_3: Ankyrin repeat | 98.82 | |
| KOG0783 | 1267 | consensus Uncharacterized conserved protein, conta | 98.81 | |
| KOG0782 | 1004 | consensus Predicted diacylglycerol kinase [Signal | 98.79 | |
| KOG0506 | 622 | consensus Glutaminase (contains ankyrin repeat) [A | 98.78 | |
| KOG0782 | 1004 | consensus Predicted diacylglycerol kinase [Signal | 98.76 | |
| PF00023 | 33 | Ank: Ankyrin repeat Hereditary spherocytosis; Inte | 98.76 | |
| KOG0783 | 1267 | consensus Uncharacterized conserved protein, conta | 98.75 | |
| KOG0818 | 669 | consensus GTPase-activating proteins of the GIT fa | 98.72 | |
| KOG0522 | 560 | consensus Ankyrin repeat protein [General function | 98.69 | |
| KOG0705 | 749 | consensus GTPase-activating protein Centaurin gamm | 98.62 | |
| KOG0506 | 622 | consensus Glutaminase (contains ankyrin repeat) [A | 98.62 | |
| KOG0818 | 669 | consensus GTPase-activating proteins of the GIT fa | 98.6 | |
| PF13606 | 30 | Ank_3: Ankyrin repeat | 98.54 | |
| PF00023 | 33 | Ank: Ankyrin repeat Hereditary spherocytosis; Inte | 98.54 | |
| KOG0522 | 560 | consensus Ankyrin repeat protein [General function | 98.53 | |
| KOG0705 | 749 | consensus GTPase-activating protein Centaurin gamm | 98.28 | |
| KOG0521 | 785 | consensus Putative GTPase activating proteins (GAP | 98.25 | |
| KOG3609 | 822 | consensus Receptor-activated Ca2+-permeable cation | 98.24 | |
| KOG0520 | 975 | consensus Uncharacterized conserved protein, conta | 98.22 | |
| KOG0521 | 785 | consensus Putative GTPase activating proteins (GAP | 98.19 | |
| KOG2384 | 223 | consensus Major histocompatibility complex protein | 97.97 | |
| KOG0511 | 516 | consensus Ankyrin repeat protein [General function | 97.97 | |
| KOG3609 | 822 | consensus Receptor-activated Ca2+-permeable cation | 97.92 | |
| KOG0511 | 516 | consensus Ankyrin repeat protein [General function | 97.86 | |
| KOG0520 | 975 | consensus Uncharacterized conserved protein, conta | 97.85 | |
| KOG2384 | 223 | consensus Major histocompatibility complex protein | 97.43 | |
| smart00248 | 30 | ANK ankyrin repeats. Ankyrin repeats are about 33 | 97.16 | |
| KOG2505 | 591 | consensus Ankyrin repeat protein [General function | 96.97 | |
| smart00248 | 30 | ANK ankyrin repeats. Ankyrin repeats are about 33 | 96.45 | |
| KOG2505 | 591 | consensus Ankyrin repeat protein [General function | 95.45 | |
| PF11929 | 76 | DUF3447: Domain of unknown function (DUF3447); Int | 87.22 | |
| PF11929 | 76 | DUF3447: Domain of unknown function (DUF3447); Int | 85.43 | |
| PF06128 | 284 | Shigella_OspC: Shigella flexneri OspC protein; Int | 84.4 |
| >KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-34 Score=237.64 Aligned_cols=182 Identities=17% Similarity=0.151 Sum_probs=155.4
Q ss_pred CCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHc-CCCCCCCCCCccCC
Q 039985 100 ANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKK-DCTIKGVPNHKKDK 178 (357)
Q Consensus 100 ~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~-g~~~~~~~~~~~~~ 178 (357)
+|+|||||||..|+.++++.|+. .+. ..+++.|+.|+| |||.|+..|+.++|+.|+.+ |++++ ..
T Consensus 37 D~Rt~LHwa~S~g~~eiv~fLls-q~n-----v~~ddkDdaGWt-Plhia~s~g~~evVk~Ll~r~~advn-------a~ 102 (226)
T KOG4412|consen 37 DGRTPLHWACSFGHVEIVYFLLS-QPN-----VKPDDKDDAGWT-PLHIAASNGNDEVVKELLNRSGADVN-------AT 102 (226)
T ss_pred cCCceeeeeeecCchhHHHHHHh-cCC-----CCCCCccccCCc-hhhhhhhcCcHHHHHHHhcCCCCCcc-------ee
Confidence 59999999999999999999997 333 236678999999 99999999999999999999 99988 56
Q ss_pred CcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCc
Q 039985 179 NWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYT 258 (357)
Q Consensus 179 ~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~T 258 (357)
+..|+||||+||..|..+|+++|+++|+.+. .+|..|+||||-|+.-|..+++++|+. .++.+|.+|+.|+|
T Consensus 103 tn~G~T~LHyAagK~r~eIaqlLle~ga~i~---~kD~~~qtplHRAAavGklkvie~Li~-----~~a~~n~qDk~G~T 174 (226)
T KOG4412|consen 103 TNGGQTCLHYAAGKGRLEIAQLLLEKGALIR---IKDKQGQTPLHRAAAVGKLKVIEYLIS-----QGAPLNTQDKYGFT 174 (226)
T ss_pred cCCCcceehhhhcCChhhHHHHHHhcCCCCc---ccccccCchhHHHHhccchhhHHHHHh-----cCCCCCcccccCcc
Confidence 6669999999999999999999999999998 999999999999999999999999988 67999999999999
Q ss_pred HHHHHHHcCCCCCCCCCCChhHHHHHhhhHHHHHHhc-cCcccccccccCCCCHHHHHhhhhHHHHH
Q 039985 259 LLHHVADMKHYKEGTRPGPVLQFQEELQLFEHVKEIM-PRHYAMHRDEKNKMTASDLFNLTHEDQLR 324 (357)
Q Consensus 259 pLh~Aa~~g~~~~~~~~~t~L~la~~l~~~~~v~~ll-~~~~~~~~n~~g~~Tp~dl~~~~~~~~~~ 324 (357)
|||.|..-|+.+ +...++ ..++....|++| ||+.++...-.+.++
T Consensus 175 pL~~al~e~~~d-------------------~a~lLV~~gAd~~~edke~--t~~~~a~~~l~~alk 220 (226)
T KOG4412|consen 175 PLHHALAEGHPD-------------------VAVLLVRAGADTDREDKEG--TALRIACNELLEALK 220 (226)
T ss_pred HHHHHHhccCch-------------------HHHHHHHhccceeeccccC--chHHHHHHHHHHHHH
Confidence 999997777753 222223 335777888866 898877654444333
|
|
| >KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-32 Score=261.19 Aligned_cols=194 Identities=13% Similarity=0.096 Sum_probs=172.6
Q ss_pred CCHHHHHHhcCCHHHHHHHHhc-CcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCc
Q 039985 102 ISTISLGLGKGNMLKAKKLVDF-SAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNW 180 (357)
Q Consensus 102 ~t~Lh~A~~~g~~~~vk~Ll~~-~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~ 180 (357)
.+.++.|+++|.++.|+.|++. +.+ .+..|++|.| +||+|+.+++.+++++|+++|++++.+...-
T Consensus 45 ~~~~v~A~q~G~l~~v~~lve~~g~~-------v~~~D~~g~t-lLHWAAiNNrl~v~r~li~~gadvn~~gG~l----- 111 (600)
T KOG0509|consen 45 LDDIVKATQYGELETVKELVESEGES-------VNNPDREGVT-LLHWAAINNRLDVARYLISHGADVNAIGGVL----- 111 (600)
T ss_pred hhhhhhHhhcchHHHHHHHHhhcCcC-------CCCCCcCCcc-ceeHHHHcCcHHHHHHHHHcCCCccccCCCC-----
Confidence 4678899999999999999998 666 7788999999 9999999999999999999999999766532
Q ss_pred CcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcHH
Q 039985 181 AIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTLL 260 (357)
Q Consensus 181 ~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpL 260 (357)
|.|||||||++|++.+|++|+++|+++. .+|.+|.||||+||+.|+.-+|-|||. .+++++.+|.+|+|||
T Consensus 112 -~stPLHWAar~G~~~vv~lLlqhGAdpt---~~D~~G~~~lHla~~~~~~~~vayll~-----~~~d~d~~D~~grTpL 182 (600)
T KOG0509|consen 112 -GSTPLHWAARNGHISVVDLLLQHGADPT---LKDKQGLTPLHLAAQFGHTALVAYLLS-----KGADIDLRDNNGRTPL 182 (600)
T ss_pred -CCCcchHHHHcCcHHHHHHHHHcCCCCc---eecCCCCcHHHHHHHhCchHHHHHHHH-----hcccCCCcCCCCCCHH
Confidence 7899999999999999999999999999 999999999999999999999999988 5689999999999999
Q ss_pred HHHHHcCCCC---------------CCCCCCChhHHHHHhhhHHHHHHhccC-cccccccccCCCCHHHHHhhh
Q 039985 261 HHVADMKHYK---------------EGTRPGPVLQFQEELQLFEHVKEIMPR-HYAMHRDEKNKMTASDLFNLT 318 (357)
Q Consensus 261 h~Aa~~g~~~---------------~~~~~~t~L~la~~l~~~~~v~~ll~~-~~~~~~n~~g~~Tp~dl~~~~ 318 (357)
||||+.|+.. ..+.+.||||.+..-++...+..++.. .+.+..|.+|+ ||++||.+.
T Consensus 183 mwAaykg~~~~v~~LL~f~a~~~~~d~~~g~TpLHwa~~~gN~~~v~Ll~~g~~~~d~~~~~g~-tp~~LA~~~ 255 (600)
T KOG0509|consen 183 MWAAYKGFALFVRRLLKFGASLLLTDDNHGNTPLHWAVVGGNLTAVKLLLEGGADLDKTNTNGK-TPFDLAQER 255 (600)
T ss_pred HHHHHhcccHHHHHHHHhcccccccccccCCchHHHHHhcCCcceEehhhhcCCcccccccCCC-CHHHHHHHh
Confidence 9999999854 125667999999998888888834433 47788999999 999999766
|
|
| >PHA02791 ankyrin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=7.1e-31 Score=242.03 Aligned_cols=220 Identities=12% Similarity=0.075 Sum_probs=158.5
Q ss_pred cHHHHHHHHHhhhhcccCCCCCCCcCcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
Q 039985 28 NANKLLKKLVKEETLCLGDGEQNPEISLLSPESSSTSLPNPEISSSNPESSTSSLPNPEIFSPDPESSTTSPANISTISL 107 (357)
Q Consensus 28 ~~~~iv~~Ll~~~~~~~d~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~Lh~ 107 (357)
.+.+++++|+++++...|.+|+||++.+...... +......+. ....+ ...|.||||+
T Consensus 10 ~~~~~~~~Lis~~a~~~D~~G~TpLh~Aa~~g~~-------eiv~~Ll~~-------------ga~~n--~~d~~TpLh~ 67 (284)
T PHA02791 10 KSKQLKSFLSSKDAFKADVHGHSALYYAIADNNV-------RLVCTLLNA-------------GALKN--LLENEFPLHQ 67 (284)
T ss_pred CHHHHHHHHHhCCCCCCCCCCCcHHHHHHHcCCH-------HHHHHHHHC-------------cCCCc--CCCCCCHHHH
Confidence 4678999999999888888999888855433321 000000000 00000 1126789999
Q ss_pred HHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCcCc-chHH
Q 039985 108 GLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNWAI-RLTL 186 (357)
Q Consensus 108 A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~G-~TpL 186 (357)
|+..|+.++++.|++.+++ .+..|..|.| |||+|+..|+.+++++|+++|++++ .++..| .|||
T Consensus 68 Aa~~g~~eiV~lLL~~Gad-------vn~~d~~G~T-pLh~Aa~~g~~eivk~Ll~~gadin-------~~~~~g~~TpL 132 (284)
T PHA02791 68 AATLEDTKIVKILLFSGMD-------DSQFDDKGNT-ALYYAVDSGNMQTVKLFVKKNWRLM-------FYGKTGWKTSF 132 (284)
T ss_pred HHHCCCHHHHHHHHHCCCC-------CCCCCCCCCC-HHHHHHHcCCHHHHHHHHHCCCCcC-------ccCCCCCcHHH
Confidence 9999999999999888887 6677888888 9999999999999999998888876 344446 4889
Q ss_pred HHHHHCCCHHHHHHHHhhCCCcccccccC-CCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcH-HHHHH
Q 039985 187 LFAASNGITEILKEIIHQHPQAILLDNLN-EKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTL-LHHVA 264 (357)
Q Consensus 187 h~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d-~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~Tp-Lh~Aa 264 (357)
|+|+..|+.++|++|++++++.. | ..|+||||+|+.+|+.+++++|++ .+++++.+|..|.|| ||+|+
T Consensus 133 ~~Aa~~g~~eivk~LL~~~~~~~-----d~~~g~TpLh~Aa~~g~~eiv~lLL~-----~gAd~n~~d~~g~t~~L~~Aa 202 (284)
T PHA02791 133 YHAVMLNDVSIVSYFLSEIPSTF-----DLAILLSCIHITIKNGHVDMMILLLD-----YMTSTNTNNSLLFIPDIKLAI 202 (284)
T ss_pred HHHHHcCCHHHHHHHHhcCCccc-----ccccCccHHHHHHHcCCHHHHHHHHH-----CCCCCCcccCCCCChHHHHHH
Confidence 99999999999999888876543 3 357899999999999999998887 677888888888877 89999
Q ss_pred HcCCCCCCCCCCChhHHHHHhhhHHHHHHhcc-CcccccccccCCCCHHHHH
Q 039985 265 DMKHYKEGTRPGPVLQFQEELQLFEHVKEIMP-RHYAMHRDEKNKMTASDLF 315 (357)
Q Consensus 265 ~~g~~~~~~~~~t~L~la~~l~~~~~v~~ll~-~~~~~~~n~~g~~Tp~dl~ 315 (357)
..|+. +.|+.|+. +.+.+.+|.+ . |+++.+
T Consensus 203 ~~~~~-------------------e~v~lLl~~Ga~in~~~~~-~-~~l~~~ 233 (284)
T PHA02791 203 DNKDL-------------------EMLQALFKYDINIYSVNLE-N-VLLDDA 233 (284)
T ss_pred HcCCH-------------------HHHHHHHHCCCCCccCccc-C-ccCCCH
Confidence 88873 34555552 3356666663 3 566554
|
|
| >PHA03095 ankyrin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.9e-31 Score=260.91 Aligned_cols=255 Identities=12% Similarity=0.126 Sum_probs=206.9
Q ss_pred hccccHHHHHHHHHhhhhc--ccCCCCCCCcCcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 039985 24 QMHKNANKLLKKLVKEETL--CLGDGEQNPEISLLSPESSSTSLPNPEISSSNPESSTSSLPNPEIFSPDPESSTTSPAN 101 (357)
Q Consensus 24 ~~~~~~~~iv~~Ll~~~~~--~~d~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 101 (357)
+......++|++|++.|++ ..+..|+||++....... ....+.... +.....+.+..+..|
T Consensus 21 ~~~~~~~~~v~~Ll~~ga~vn~~~~~g~t~Lh~a~~~~~----~~~~~iv~~-------------Ll~~Gadin~~~~~g 83 (471)
T PHA03095 21 NASNVTVEEVRRLLAAGADVNFRGEYGKTPLHLYLHYSS----EKVKDIVRL-------------LLEAGADVNAPERCG 83 (471)
T ss_pred cCCCCCHHHHHHHHHcCCCcccCCCCCCCHHHHHHHhcC----CChHHHHHH-------------HHHCCCCCCCCCCCC
Confidence 4566778999999999999 778889999985543330 000000000 011122333344469
Q ss_pred CCHHHHHHhcC-CHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHH--hcCcHHHHHHHHHcCCCCCCCCCCccCC
Q 039985 102 ISTISLGLGKG-NMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFV--DFSAAELVELFVKKDCTIKGVPNHKKDK 178 (357)
Q Consensus 102 ~t~Lh~A~~~g-~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~--~~g~~~iv~~Ll~~g~~~~~~~~~~~~~ 178 (357)
.||||+|+..| +.++++.|++.+++ .+..|..|.| |||+|+ ..++.+++++|+++|++++ .+
T Consensus 84 ~TpLh~A~~~~~~~~iv~lLl~~ga~-------in~~~~~g~t-pLh~a~~~~~~~~~iv~~Ll~~gad~~-------~~ 148 (471)
T PHA03095 84 FTPLHLYLYNATTLDVIKLLIKAGAD-------VNAKDKVGRT-PLHVYLSGFNINPKVIRLLLRKGADVN-------AL 148 (471)
T ss_pred CCHHHHHHHcCCcHHHHHHHHHcCCC-------CCCCCCCCCC-HHHHHhhCCcCCHHHHHHHHHcCCCCC-------cc
Confidence 99999999999 59999999999998 7789999999 999999 5678999999999999987 56
Q ss_pred CcCcchHHHHHHHCC--CHHHHHHHHhhCCCcccccccCCCCChHHHHHHHc--CCHHHHHHHHhhhccCCccccccccC
Q 039985 179 NWAIRLTLLFAASNG--ITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKR--RQYKVFELITKEMQLSVPKWASRIDK 254 (357)
Q Consensus 179 ~~~G~TpLh~Aa~~G--~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~--g~~~iv~~Ll~~~~~~~~~~~~~~d~ 254 (357)
|..|.||||+|+..+ +.+++++|+++|+++. ..|..|+||||+|+.. ++.+++++|+. .+++++.+|.
T Consensus 149 d~~g~tpL~~a~~~~~~~~~iv~~Ll~~g~~~~---~~d~~g~t~Lh~~~~~~~~~~~i~~~Ll~-----~g~~~~~~d~ 220 (471)
T PHA03095 149 DLYGMTPLAVLLKSRNANVELLRLLIDAGADVY---AVDDRFRSLLHHHLQSFKPRARIVRELIR-----AGCDPAATDM 220 (471)
T ss_pred CCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCc---ccCCCCCCHHHHHHHHCCCcHHHHHHHHH-----cCCCCcccCC
Confidence 667999999998876 6899999999999998 6699999999999975 77899999988 7889999999
Q ss_pred CCCcHHHHHHHcCCCC----------------CCCCCCChhHHHHHhhhHHHHHHhcc-CcccccccccCCCCHHHHHhh
Q 039985 255 KGYTLLHHVADMKHYK----------------EGTRPGPVLQFQEELQLFEHVKEIMP-RHYAMHRDEKNKMTASDLFNL 317 (357)
Q Consensus 255 ~G~TpLh~Aa~~g~~~----------------~~~~~~t~L~la~~l~~~~~v~~ll~-~~~~~~~n~~g~~Tp~dl~~~ 317 (357)
.|+||||+|+..|+.. ....+.|||++|...+..+.++.++. +.+.+.+|.+|+ ||+++|..
T Consensus 221 ~g~tpLh~Aa~~~~~~~~~v~~ll~~g~din~~d~~g~TpLh~A~~~~~~~~v~~LL~~gad~n~~~~~g~-tpl~~A~~ 299 (471)
T PHA03095 221 LGNTPLHSMATGSSCKRSLVLPLLIAGISINARNRYGQTPLHYAAVFNNPRACRRLIALGADINAVSSDGN-TPLSLMVR 299 (471)
T ss_pred CCCCHHHHHHhcCCchHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCC-CHHHHHHH
Confidence 9999999999998743 13345599999999989999998884 568899999999 99999975
Q ss_pred hh
Q 039985 318 TH 319 (357)
Q Consensus 318 ~~ 319 (357)
..
T Consensus 300 ~~ 301 (471)
T PHA03095 300 NN 301 (471)
T ss_pred hC
Confidence 33
|
|
| >PHA02874 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-30 Score=256.04 Aligned_cols=254 Identities=12% Similarity=0.089 Sum_probs=196.2
Q ss_pred ccHHHHHHHHHhhhhc---ccCCCCCCCcCcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 039985 27 KNANKLLKKLVKEETL---CLGDGEQNPEISLLSPESSSTSLPNPEISSSNPESSTSSLPNPEIFSPDPESSTTSPANIS 103 (357)
Q Consensus 27 ~~~~~iv~~Ll~~~~~---~~d~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t 103 (357)
.+..++|+.|++.+.. ..+++|.||++.+..... .+......+ ...+.+..+..|.|
T Consensus 11 ~gd~~~v~~ll~~~~~~~n~~~~~~~tpL~~A~~~g~-------~~iv~~Ll~-------------~Ga~~n~~~~~~~t 70 (434)
T PHA02874 11 SGDIEAIEKIIKNKGNCINISVDETTTPLIDAIRSGD-------AKIVELFIK-------------HGADINHINTKIPH 70 (434)
T ss_pred cCCHHHHHHHHHcCCCCCCCcCCCCCCHHHHHHHcCC-------HHHHHHHHH-------------CCCCCCCCCCCCCC
Confidence 3455778888876554 566778888885543332 111111111 11122233445889
Q ss_pred HHHHHHhcCCHHHHHHHHhcCcch-----------hHHHhh-----hhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCC
Q 039985 104 TISLGLGKGNMLKAKKLVDFSAGE-----------LDELLL-----KKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCT 167 (357)
Q Consensus 104 ~Lh~A~~~g~~~~vk~Ll~~~~~~-----------~~~~l~-----~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~ 167 (357)
|||.|+..|+.+++++|++.+++. ....++ .+..+..|.| |||+|+..|+.++|++|+++|++
T Consensus 71 ~L~~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~i~~ll~~g~d~n~~~~~g~T-~Lh~A~~~~~~~~v~~Ll~~gad 149 (434)
T PHA02874 71 PLLTAIKIGAHDIIKLLIDNGVDTSILPIPCIEKDMIKTILDCGIDVNIKDAELKT-FLHYAIKKGDLESIKMLFEYGAD 149 (434)
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCcchhccCCHHHHHHHHHCcCCCCCCCCCCcc-HHHHHHHCCCHHHHHHHHhCCCC
Confidence 999999999999999999988641 111111 2346788999 99999999999999999999999
Q ss_pred CCCCCCCccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCcc
Q 039985 168 IKGVPNHKKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPK 247 (357)
Q Consensus 168 ~~~~~~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~ 247 (357)
++ .+|..|.||||+|+..|+.+++++|+++|+++. ..|..|+||||+|+..|+.+++++|++ .+.
T Consensus 150 ~n-------~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n---~~~~~g~tpL~~A~~~g~~~iv~~Ll~-----~g~ 214 (434)
T PHA02874 150 VN-------IEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYAN---VKDNNGESPLHNAAEYGDYACIKLLID-----HGN 214 (434)
T ss_pred CC-------CcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCC---CCCCCCCCHHHHHHHcCCHHHHHHHHh-----CCC
Confidence 87 556679999999999999999999999999998 899999999999999999999999988 678
Q ss_pred ccccccCCCCcHHHHHHHcCCCC------------CCCCCCChhHHHHHhh-hHHHHHHhc-cCcccccccccCCCCHHH
Q 039985 248 WASRIDKKGYTLLHHVADMKHYK------------EGTRPGPVLQFQEELQ-LFEHVKEIM-PRHYAMHRDEKNKMTASD 313 (357)
Q Consensus 248 ~~~~~d~~G~TpLh~Aa~~g~~~------------~~~~~~t~L~la~~l~-~~~~v~~ll-~~~~~~~~n~~g~~Tp~d 313 (357)
+++.++..|.||||+|+..++.. ....+.|||+.|...+ ..+.++.++ .+.+.+.+|..|+ ||++
T Consensus 215 ~i~~~~~~g~TpL~~A~~~~~~~i~~Ll~~~~in~~d~~G~TpLh~A~~~~~~~~iv~~Ll~~gad~n~~d~~g~-TpL~ 293 (434)
T PHA02874 215 HIMNKCKNGFTPLHNAIIHNRSAIELLINNASINDQDIDGSTPLHHAINPPCDIDIIDILLYHKADISIKDNKGE-NPID 293 (434)
T ss_pred CCcCCCCCCCCHHHHHHHCChHHHHHHHcCCCCCCcCCCCCCHHHHHHhcCCcHHHHHHHHHCcCCCCCCCCCCC-CHHH
Confidence 89999999999999999876421 1234559999998765 445566666 3458899999999 9999
Q ss_pred HHhh
Q 039985 314 LFNL 317 (357)
Q Consensus 314 l~~~ 317 (357)
+|.+
T Consensus 294 ~A~~ 297 (434)
T PHA02874 294 TAFK 297 (434)
T ss_pred HHHH
Confidence 9964
|
|
| >KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.5e-31 Score=219.50 Aligned_cols=190 Identities=20% Similarity=0.188 Sum_probs=156.0
Q ss_pred HHHHHHhhhh-c--ccCC-CCCCCcCcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
Q 039985 32 LLKKLVKEET-L--CLGD-GEQNPEISLLSPESSSTSLPNPEISSSNPESSTSSLPNPEIFSPDPESSTTSPANISTISL 107 (357)
Q Consensus 32 iv~~Ll~~~~-~--~~d~-~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~Lh~ 107 (357)
=|+.|++... + .+++ |||+|++.+.+-... ++..-... .|.. ..+..+..|+||||.
T Consensus 18 kveel~~s~~kSL~~r~dqD~Rt~LHwa~S~g~~-------eiv~fLls-------q~nv-----~~ddkDdaGWtPlhi 78 (226)
T KOG4412|consen 18 KVEELIQSDPKSLNARDDQDGRTPLHWACSFGHV-------EIVYFLLS-------QPNV-----KPDDKDDAGWTPLHI 78 (226)
T ss_pred HHHHHHhcChhhhhccccccCCceeeeeeecCch-------hHHHHHHh-------cCCC-----CCCCccccCCchhhh
Confidence 3555555544 3 4555 999999988766652 11111110 1111 112224459999999
Q ss_pred HHhcCCHHHHHHHHhc-CcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCcCcchHH
Q 039985 108 GLGKGNMLKAKKLVDF-SAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNWAIRLTL 186 (357)
Q Consensus 108 A~~~g~~~~vk~Ll~~-~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~G~TpL 186 (357)
||..|+.++|+.|+.. +++ ++..++.|.| +||||+..|..+|+++|+++|+.+. .+|..|.|||
T Consensus 79 a~s~g~~evVk~Ll~r~~ad-------vna~tn~G~T-~LHyAagK~r~eIaqlLle~ga~i~-------~kD~~~qtpl 143 (226)
T KOG4412|consen 79 AASNGNDEVVKELLNRSGAD-------VNATTNGGQT-CLHYAAGKGRLEIAQLLLEKGALIR-------IKDKQGQTPL 143 (226)
T ss_pred hhhcCcHHHHHHHhcCCCCC-------cceecCCCcc-eehhhhcCChhhHHHHHHhcCCCCc-------ccccccCchh
Confidence 9999999999999998 777 7889999999 9999999999999999999999987 7777799999
Q ss_pred HHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcHHHHHH
Q 039985 187 LFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTLLHHVA 264 (357)
Q Consensus 187 h~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa 264 (357)
|.||..|.++++++|+..|+.++ .+|..|+||||+|...||.++..+|++ .+++.+..|++| |||-.|+
T Consensus 144 HRAAavGklkvie~Li~~~a~~n---~qDk~G~TpL~~al~e~~~d~a~lLV~-----~gAd~~~edke~-t~~~~a~ 212 (226)
T KOG4412|consen 144 HRAAAVGKLKVIEYLISQGAPLN---TQDKYGFTPLHHALAEGHPDVAVLLVR-----AGADTDREDKEG-TALRIAC 212 (226)
T ss_pred HHHHhccchhhHHHHHhcCCCCC---cccccCccHHHHHHhccCchHHHHHHH-----hccceeeccccC-chHHHHH
Confidence 99999999999999999999888 999999999999999999999999988 678999999988 9988776
|
|
| >PHA02946 ankyin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1e-29 Score=249.65 Aligned_cols=178 Identities=15% Similarity=0.140 Sum_probs=150.5
Q ss_pred CCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcC--cHHHHHHHHHcCCCCCCCCCCccC
Q 039985 100 ANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFS--AAELVELFVKKDCTIKGVPNHKKD 177 (357)
Q Consensus 100 ~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g--~~~iv~~Ll~~g~~~~~~~~~~~~ 177 (357)
.|.||||+|+..|+.++|+.|++.|++ .+.+|..|.| |||+|+..+ ..+++++|+++|++++. .
T Consensus 71 ~G~TpLh~Aa~~g~~eiv~lLL~~GAd-------in~~d~~g~T-pLh~A~~~~~~~~e~v~lLl~~Gadin~------~ 136 (446)
T PHA02946 71 DGNYPLHIASKINNNRIVAMLLTHGAD-------PNACDKQHKT-PLYYLSGTDDEVIERINLLVQYGAKINN------S 136 (446)
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCcCC-------CCCCCCCCCC-HHHHHHHcCCchHHHHHHHHHcCCCccc------c
Confidence 477999999999999999999999998 7889999999 999998876 48999999999999872 2
Q ss_pred CCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCC--HHHHHHHHhhhccCCccccccccCC
Q 039985 178 KNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQ--YKVFELITKEMQLSVPKWASRIDKK 255 (357)
Q Consensus 178 ~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~--~~iv~~Ll~~~~~~~~~~~~~~d~~ 255 (357)
.+..|.|||| ||..|+.+++++|++.|+++. .+|..|+||||+|+..++ .+++++|++ .+++++.+|.+
T Consensus 137 ~d~~g~tpL~-aa~~~~~~vv~~Ll~~gad~~---~~d~~G~t~Lh~A~~~~~~~~~~v~~Ll~-----~Gadin~~d~~ 207 (446)
T PHA02946 137 VDEEGCGPLL-ACTDPSERVFKKIMSIGFEAR---IVDKFGKNHIHRHLMSDNPKASTISWMMK-----LGISPSKPDHD 207 (446)
T ss_pred cCCCCCcHHH-HHHCCChHHHHHHHhcccccc---ccCCCCCCHHHHHHHhcCCCHHHHHHHHH-----cCCCCcccCCC
Confidence 3445999997 777899999999999999998 999999999999988654 689999988 78899999999
Q ss_pred CCcHHHHHHHcCCCCCCCCCCChhHHHHHhhhHHHHHHhccCcccccccccCCCCHHHHHhhh
Q 039985 256 GYTLLHHVADMKHYKEGTRPGPVLQFQEELQLFEHVKEIMPRHYAMHRDEKNKMTASDLFNLT 318 (357)
Q Consensus 256 G~TpLh~Aa~~g~~~~~~~~~t~L~la~~l~~~~~v~~ll~~~~~~~~n~~g~~Tp~dl~~~~ 318 (357)
|+||||+|+..|.. ..+.++.++...+.+.+|.+|+ ||+++|.+.
T Consensus 208 G~TpLH~Aa~~~~~-----------------~~~iv~lLl~gadin~~d~~G~-TpLh~A~~~ 252 (446)
T PHA02946 208 GNTPLHIVCSKTVK-----------------NVDIINLLLPSTDVNKQNKFGD-SPLTLLIKT 252 (446)
T ss_pred CCCHHHHHHHcCCC-----------------cHHHHHHHHcCCCCCCCCCCCC-CHHHHHHHh
Confidence 99999999998742 1234455555567777888888 888887654
|
|
| >KOG0510 consensus Ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.2e-30 Score=253.42 Aligned_cols=252 Identities=17% Similarity=0.143 Sum_probs=185.4
Q ss_pred cHHHHHHHHHhhhhc--ccCCCCCCCcCcCCCCCCCCC-------CCCCCCCCCC-CCC---CCCCCCCC-CCCCC----
Q 039985 28 NANKLLKKLVKEETL--CLGDGEQNPEISLLSPESSST-------SLPNPEISSS-NPE---SSTSSLPN-PEIFS---- 89 (357)
Q Consensus 28 ~~~~iv~~Ll~~~~~--~~d~~g~~p~~~~~~~~~~~~-------~~~~~~~~~~-~~~---~~~~~~~~-~~~~~---- 89 (357)
+..+.++.|++++++ ..|..|.||++.++.-...-- ...++..... ..+ ...+.-+. ++++.
T Consensus 132 ~~~s~L~~Ll~~~~dvnl~de~~~TpLh~A~~~~~~E~~k~Li~~~a~~~K~~~~~~~~iH~aa~s~s~e~mEi~l~~~g 211 (929)
T KOG0510|consen 132 GNYSCLKLLLDYGADVNLEDENGFTPLHLAARKNKVEAKKELINKGADPCKSDIDGNFPIHEAARSGSKECMEIFLPEHG 211 (929)
T ss_pred chHHHHHHHHHhcCCccccccCCCchhhHHHhcChHHHHHHHHhcCCCCCcccCcCCchHHHHHHhcchhhhhhhhcccc
Confidence 445688899999888 777788888886543322110 0000000000 000 00000000 12111
Q ss_pred --CCCCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhcCcc--------hhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHH
Q 039985 90 --PDPESSTTSPANISTISLGLGKGNMLKAKKLVDFSAG--------ELDELLLKKDCTNKGNMIKAKKFVDFSAAELVE 159 (357)
Q Consensus 90 --~~~~~~~~~~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~--------~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~ 159 (357)
.....+...+.|.||||.|+..|++++++.+|+.+.. ..+.....++.|++|+| |||+|++.|+.+.|+
T Consensus 212 ~~r~~~in~~~n~~~~pLhlAve~g~~e~lk~~L~n~~~~a~~~~~~~~q~kelv~~~d~dg~t-pLH~a~r~G~~~svd 290 (929)
T KOG0510|consen 212 YERQTHINFDNNEKATPLHLAVEGGDIEMLKMCLQNGKKIADVQLDAMQQEKELVNDEDNDGCT-PLHYAARQGGPESVD 290 (929)
T ss_pred chhhcccccccCCCCcchhhhhhcCCHHHHHHHHhCccccchhhhHHHHHHHHHhhcccccCCc-hHHHHHHcCChhHHH
Confidence 1233445566799999999999999999999998876 22233456789999999 999999999999999
Q ss_pred HHHHcCCCCCCCCCCccCCCcCcchHHHHHHHCCCHHHHHHHHh-hCCCcccccccCCCCChHHHHHHHcCCHHHHHHHH
Q 039985 160 LFVKKDCTIKGVPNHKKDKNWAIRLTLLFAASNGITEILKEIIH-QHPQAILLDNLNEKEQNILHVAVKRRQYKVFELIT 238 (357)
Q Consensus 160 ~Ll~~g~~~~~~~~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~-~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll 238 (357)
.|+..|++++ .++.++.||||.||++|+.++|+.||+ .+.... +..|..|+||||+|+.+||..++++|+
T Consensus 291 ~Ll~~Ga~I~-------~kn~d~~spLH~AA~yg~~ntv~rLL~~~~~rll--ne~D~~g~tpLHlaa~~gH~~v~qlLl 361 (929)
T KOG0510|consen 291 NLLGFGASIN-------SKNKDEESPLHFAAIYGRINTVERLLQESDTRLL--NESDLHGMTPLHLAAKSGHDRVVQLLL 361 (929)
T ss_pred HHHHcCCccc-------ccCCCCCCchHHHHHcccHHHHHHHHhCcCcccc--ccccccCCCchhhhhhcCHHHHHHHHH
Confidence 9999999998 777779999999999999999999999 443333 688999999999999999999999999
Q ss_pred hhhccCCccccc---cccCCCCcHHHHHHHcCCCCCCCCCCChhHHHHHhhhHHHHHHhc-cCcccccccccCCCCHHHH
Q 039985 239 KEMQLSVPKWAS---RIDKKGYTLLHHVADMKHYKEGTRPGPVLQFQEELQLFEHVKEIM-PRHYAMHRDEKNKMTASDL 314 (357)
Q Consensus 239 ~~~~~~~~~~~~---~~d~~G~TpLh~Aa~~g~~~~~~~~~t~L~la~~l~~~~~v~~ll-~~~~~~~~n~~g~~Tp~dl 314 (357)
. +|+... ..|.+|+||||+||+.|+.+ +|+.++ .++++..+|++|+ |++++
T Consensus 362 ~-----~GA~~~~~~e~D~dg~TaLH~Aa~~g~~~-------------------av~~Li~~Ga~I~~~n~~g~-SA~~~ 416 (929)
T KOG0510|consen 362 N-----KGALFLNMSEADSDGNTALHLAAKYGNTS-------------------AVQKLISHGADIGVKNKKGK-SAFDT 416 (929)
T ss_pred h-----cChhhhcccccccCCchhhhHHHHhccHH-------------------HHHHHHHcCCceeecccccc-ccccc
Confidence 8 566655 56999999999999999853 466666 3457778888888 88874
|
|
| >PHA02875 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.7e-29 Score=245.19 Aligned_cols=193 Identities=18% Similarity=0.053 Sum_probs=110.5
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCc
Q 039985 101 NISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNW 180 (357)
Q Consensus 101 g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~ 180 (357)
|.||||+|+..|+.++++.|++.++. .+..+..+.| |||+|+..|+.++|++|++.|+..... .+.
T Consensus 35 g~tpL~~A~~~~~~~~v~~Ll~~ga~-------~~~~~~~~~t-~L~~A~~~g~~~~v~~Ll~~~~~~~~~------~~~ 100 (413)
T PHA02875 35 GISPIKLAMKFRDSEAIKLLMKHGAI-------PDVKYPDIES-ELHDAVEEGDVKAVEELLDLGKFADDV------FYK 100 (413)
T ss_pred CCCHHHHHHHcCCHHHHHHHHhCCCC-------ccccCCCccc-HHHHHHHCCCHHHHHHHHHcCCccccc------ccC
Confidence 44666666666666666666666554 3334455555 666666666666666666665544321 122
Q ss_pred CcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcHH
Q 039985 181 AIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTLL 260 (357)
Q Consensus 181 ~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpL 260 (357)
.|.||||+|+..|+.+++++|+++|+++. .+|..|+||||+|+..|+.+++++|++ .+++++.+|..|.|||
T Consensus 101 ~g~tpL~~A~~~~~~~iv~~Ll~~gad~~---~~~~~g~tpLh~A~~~~~~~~v~~Ll~-----~g~~~~~~d~~g~TpL 172 (413)
T PHA02875 101 DGMTPLHLATILKKLDIMKLLIARGADPD---IPNTDKFSPLHLAVMMGDIKGIELLID-----HKACLDIEDCCGCTPL 172 (413)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHhCCCCCC---CCCCCCCCHHHHHHHcCCHHHHHHHHh-----cCCCCCCCCCCCCCHH
Confidence 25666666666666666666666666655 556666666666666666666666655 4455556666666666
Q ss_pred HHHHHcCCCCC--------------CCCCC-ChhHHHHHhhhHHHHHHhccC-ccccc---ccccCCCCHHHHHh
Q 039985 261 HHVADMKHYKE--------------GTRPG-PVLQFQEELQLFEHVKEIMPR-HYAMH---RDEKNKMTASDLFN 316 (357)
Q Consensus 261 h~Aa~~g~~~~--------------~~~~~-t~L~la~~l~~~~~v~~ll~~-~~~~~---~n~~g~~Tp~dl~~ 316 (357)
|+|+..|+.+. ...++ ++++.|...+..+.++.++.. .+.+. .+.++. ||++++.
T Consensus 173 ~~A~~~g~~eiv~~Ll~~ga~~n~~~~~~~~t~l~~A~~~~~~~iv~~Ll~~gad~n~~~~~~~~~~-t~l~~~~ 246 (413)
T PHA02875 173 IIAMAKGDIAICKMLLDSGANIDYFGKNGCVAALCYAIENNKIDIVRLFIKRGADCNIMFMIEGEEC-TILDMIC 246 (413)
T ss_pred HHHHHcCCHHHHHHHHhCCCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHHCCcCcchHhhcCCCch-HHHHHHH
Confidence 66666665431 11111 455555555556667777643 34443 356788 9998764
|
|
| >PHA02878 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.8e-29 Score=249.52 Aligned_cols=193 Identities=12% Similarity=0.048 Sum_probs=162.2
Q ss_pred CCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHH----------------
Q 039985 100 ANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVK---------------- 163 (357)
Q Consensus 100 ~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~---------------- 163 (357)
.+.||||+|+..|+.++|+.|++.|++ .+..|..|.| |||+|+..|+.++++.|++
T Consensus 36 ~~~tPLh~A~~~g~~e~vk~Ll~~gad-------vn~~d~~g~T-pLh~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~l~~ 107 (477)
T PHA02878 36 IPFIPLHQAVEARNLDVVKSLLTRGHN-------VNQPDHRDLT-PLHIICKEPNKLGMKEMIRSINKCSVFYTLVAIKD 107 (477)
T ss_pred cCcchHHHHHHcCCHHHHHHHHHCCCC-------CCCCCCCCCC-HHHHHHHCccHhHHHHHHHHHhccccccchhhHHH
Confidence 478999999999999999999999988 7788999999 9999998876655555444
Q ss_pred ------------------------------------------------cCCCCCCCCCCccCCCcC-cchHHHHHHHCCC
Q 039985 164 ------------------------------------------------KDCTIKGVPNHKKDKNWA-IRLTLLFAASNGI 194 (357)
Q Consensus 164 ------------------------------------------------~g~~~~~~~~~~~~~~~~-G~TpLh~Aa~~G~ 194 (357)
+|++++ .++.. |.||||+||..|+
T Consensus 108 a~~~~~~ei~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~gadin-------~~~~~~g~tpLh~A~~~~~ 180 (477)
T PHA02878 108 AFNNRNVEIFKIILTNRYKNIQTIDLVYIDKKSKDDIIEAEITKLLLSYGADIN-------MKDRHKGNTALHYATENKD 180 (477)
T ss_pred HHHcCCHHHHHHHHhCcccCcccCcHHHHhhccchhhHHHHHHHHHHHcCCCCC-------ccCCCCCCCHHHHHHhCCC
Confidence 444433 44555 9999999999999
Q ss_pred HHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcHHHHHHHc-CCCCC--
Q 039985 195 TEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTLLHHVADM-KHYKE-- 271 (357)
Q Consensus 195 ~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~-g~~~~-- 271 (357)
.+++++|+++|++++ .+|..|+||||+|+..|+.+++++|++ .+++++.+|..|+||||+|+.. ++.+.
T Consensus 181 ~~iv~~Ll~~gad~n---~~d~~g~tpLh~A~~~~~~~iv~~Ll~-----~ga~in~~d~~g~TpLh~A~~~~~~~~iv~ 252 (477)
T PHA02878 181 QRLTELLLSYGANVN---IPDKTNNSPLHHAVKHYNKPIVHILLE-----NGASTDARDKCGNTPLHISVGYCKDYDILK 252 (477)
T ss_pred HHHHHHHHHCCCCCC---CcCCCCCCHHHHHHHhCCHHHHHHHHH-----cCCCCCCCCCCCCCHHHHHHHhcCCHHHHH
Confidence 999999999999998 999999999999999999999999998 7889999999999999999976 44331
Q ss_pred ------------C-CCCCChhHHHHHhhhHHHHHHhcc-CcccccccccCCCCHHHHHhhh
Q 039985 272 ------------G-TRPGPVLQFQEELQLFEHVKEIMP-RHYAMHRDEKNKMTASDLFNLT 318 (357)
Q Consensus 272 ------------~-~~~~t~L~la~~l~~~~~v~~ll~-~~~~~~~n~~g~~Tp~dl~~~~ 318 (357)
. ..+.|||+.| .+..+.++.++. +.+.+..|.+|. ||+++|...
T Consensus 253 ~Ll~~gadvn~~~~~~g~TpLh~A--~~~~~~v~~Ll~~gadin~~d~~g~-TpL~~A~~~ 310 (477)
T PHA02878 253 LLLEHGVDVNAKSYILGLTALHSS--IKSERKLKLLLEYGADINSLNSYKL-TPLSSAVKQ 310 (477)
T ss_pred HHHHcCCCCCccCCCCCCCHHHHH--ccCHHHHHHHHHCCCCCCCcCCCCC-CHHHHHHHH
Confidence 1 1355999999 345566666664 458899999999 999999753
|
|
| >KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-29 Score=245.33 Aligned_cols=162 Identities=14% Similarity=0.060 Sum_probs=147.1
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcC-CCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCC
Q 039985 101 NISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCT-NKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKN 179 (357)
Q Consensus 101 g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~-~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~ 179 (357)
|.|+|||||.+++.+++++|++.+++ ++... .-+.| |||+|++.|+..+|++|+++|+++. .+|
T Consensus 78 g~tlLHWAAiNNrl~v~r~li~~gad-------vn~~gG~l~st-PLHWAar~G~~~vv~lLlqhGAdpt-------~~D 142 (600)
T KOG0509|consen 78 GVTLLHWAAINNRLDVARYLISHGAD-------VNAIGGVLGST-PLHWAARNGHISVVDLLLQHGADPT-------LKD 142 (600)
T ss_pred CccceeHHHHcCcHHHHHHHHHcCCC-------ccccCCCCCCC-cchHHHHcCcHHHHHHHHHcCCCCc-------eec
Confidence 77999999999999999999999998 66666 66777 9999999999999999999999998 777
Q ss_pred cCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCcccccccc-CCCCc
Q 039985 180 WAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRID-KKGYT 258 (357)
Q Consensus 180 ~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d-~~G~T 258 (357)
..|.||||+||+.||+-+|-+||.+++++. .+|.+|+||||+|+..|+...++.||+ .++.++.+| ..|+|
T Consensus 143 ~~G~~~lHla~~~~~~~~vayll~~~~d~d---~~D~~grTpLmwAaykg~~~~v~~LL~-----f~a~~~~~d~~~g~T 214 (600)
T KOG0509|consen 143 KQGLTPLHLAAQFGHTALVAYLLSKGADID---LRDNNGRTPLMWAAYKGFALFVRRLLK-----FGASLLLTDDNHGNT 214 (600)
T ss_pred CCCCcHHHHHHHhCchHHHHHHHHhcccCC---CcCCCCCCHHHHHHHhcccHHHHHHHH-----hcccccccccccCCc
Confidence 889999999999999999999999999988 999999999999999999988888888 778888887 99999
Q ss_pred HHHHHHHcCCCCC--------------CCCCCChhHHHHHh
Q 039985 259 LLHHVADMKHYKE--------------GTRPGPVLQFQEEL 285 (357)
Q Consensus 259 pLh~Aa~~g~~~~--------------~~~~~t~L~la~~l 285 (357)
|||||+..|+... +..+.||+++|.+.
T Consensus 215 pLHwa~~~gN~~~v~Ll~~g~~~~d~~~~~g~tp~~LA~~~ 255 (600)
T KOG0509|consen 215 PLHWAVVGGNLTAVKLLLEGGADLDKTNTNGKTPFDLAQER 255 (600)
T ss_pred hHHHHHhcCCcceEehhhhcCCcccccccCCCCHHHHHHHh
Confidence 9999999999662 23345999999775
|
|
| >PHA02716 CPXV016; CPX019; EVM010; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1e-29 Score=258.53 Aligned_cols=250 Identities=14% Similarity=0.049 Sum_probs=189.8
Q ss_pred cHHHHHHHHHhhh-hc--cc-CCCCCCCcCcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 039985 28 NANKLLKKLVKEE-TL--CL-GDGEQNPEISLLSPESSSTSLPNPEISSSNPESSTSSLPNPEIFSPDPESSTTSPANIS 103 (357)
Q Consensus 28 ~~~~iv~~Ll~~~-~~--~~-d~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t 103 (357)
...++|++|+++| ++ .. |..|+||++......+. ..+..+. +.....+.+..+..|.|
T Consensus 153 v~leiVk~LLe~G~ADIN~~~d~~G~TpLH~A~~n~~~-----~~eIVkl-------------LLe~GADVN~kD~~G~T 214 (764)
T PHA02716 153 IDLDLIKYMVDVGIVNLNYVCKKTGYGILHAYLGNMYV-----DIDILEW-------------LCNNGVNVNLQNNHLIT 214 (764)
T ss_pred CCHHHHHHHHHCCCCCcccccCCCCCcHHHHHHHhccC-----CHHHHHH-------------HHHcCCCCCCCCCCCCC
Confidence 5568999999999 77 45 78899999842211110 0000000 01112233444556999
Q ss_pred HHHHHHhcCC--HHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHH--------------------------------
Q 039985 104 TISLGLGKGN--MLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKF-------------------------------- 149 (357)
Q Consensus 104 ~Lh~A~~~g~--~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A-------------------------------- 149 (357)
|||+|+..|+ .++|++|++.|++ .+..|..|.| |||+|
T Consensus 215 PLH~Aa~~g~~~~eIVklLLe~GAD-------VN~kD~~G~T-PLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~ 286 (764)
T PHA02716 215 PLHTYLITGNVCASVIKKIIELGGD-------MDMKCVNGMS-PIMTYIINIDNINPEITNIYIESLDGNKVKNIPMILH 286 (764)
T ss_pred HHHHHHHcCCCCHHHHHHHHHcCCC-------CCCCCCCCCC-HHHHHHHhhhccCHHHHHHHHHhccccccccchhhhH
Confidence 9999999996 5999999999999 7888999999 99975
Q ss_pred -----HhcCcHHHHHHHHHcCCCCCCCCCCccCCCcCcchHHHHHHH--CCCHHHHHHHHhhCCCcccccccCCCCChHH
Q 039985 150 -----VDFSAAELVELFVKKDCTIKGVPNHKKDKNWAIRLTLLFAAS--NGITEILKEIIHQHPQAILLDNLNEKEQNIL 222 (357)
Q Consensus 150 -----~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~G~TpLh~Aa~--~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpL 222 (357)
+..|+.++|++|+++|++++ .+|..|+||||+|+. .|+.+++++|+++|++++ .+|..|+|||
T Consensus 287 ~~i~AA~~g~leiVklLLe~GAdIN-------~kD~~G~TPLH~Aaa~~~~~~eIVklLLe~GADIN---~kD~~G~TPL 356 (764)
T PHA02716 287 SYITLARNIDISVVYSFLQPGVKLH-------YKDSAGRTCLHQYILRHNISTDIIKLLHEYGNDLN---EPDNIGNTVL 356 (764)
T ss_pred HHHHHHHcCCHHHHHHHHhCCCcee-------ccCCCCCCHHHHHHHHhCCCchHHHHHHHcCCCCc---cCCCCCCCHH
Confidence 44578899999999999987 566679999999864 568999999999999998 9999999999
Q ss_pred HHHHH--------------cCCHHHHHHHHhhhccCCccccccccCCCCcHHHHH---HHc-CCC---------------
Q 039985 223 HVAVK--------------RRQYKVFELITKEMQLSVPKWASRIDKKGYTLLHHV---ADM-KHY--------------- 269 (357)
Q Consensus 223 h~A~~--------------~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLh~A---a~~-g~~--------------- 269 (357)
|+|+. .++.+++++|++ .|++++.+|..|.||||.| +.. ++.
T Consensus 357 H~A~~~lav~~~ld~~~~~~~~~eVVklLL~-----~GADIn~kn~~G~TPLh~y~~~a~n~~~~dIvklLis~~~~~~~ 431 (764)
T PHA02716 357 HTYLSMLSVVNILDPETDNDIRLDVIQCLIS-----LGADITAVNCLGYTPLTSYICTAQNYMYYDIIDCLISDKVLNMV 431 (764)
T ss_pred HHHHHhhhhhccccccccccChHHHHHHHHH-----CCCCCCCcCCCCCChHHHHHHHHHhcChHHHHHHHHhCcchhhh
Confidence 99875 378999999998 7899999999999999942 111 100
Q ss_pred -------------------------------------------C-----------------CCCCCCChhHHHHHhhhHH
Q 039985 270 -------------------------------------------K-----------------EGTRPGPVLQFQEELQLFE 289 (357)
Q Consensus 270 -------------------------------------------~-----------------~~~~~~t~L~la~~l~~~~ 289 (357)
. ....+.|||+.|...+...
T Consensus 432 ~~~~~q~ll~~~d~~~~~lhh~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~ii~~~nvN~~D~~G~TPLh~Aa~~g~~~ 511 (764)
T PHA02716 432 KHRILQDLLIRVDDTPCIIHHIIAKYNIPTDLYTDEYEPYDSTKIHDVYHCAIIERYNNAVCETSGMTPLHVSIISHTNA 511 (764)
T ss_pred hhhhhhhhhhccCcchhhHHHHHHhcCcchhhhhhhhhhccccccchhhHHHHHhhccccccCCCCCCHHHHHHHcCCcc
Confidence 0 0112449999998866543
Q ss_pred -----HHHHhcc-CcccccccccCCCCHHHHHhhhh
Q 039985 290 -----HVKEIMP-RHYAMHRDEKNKMTASDLFNLTH 319 (357)
Q Consensus 290 -----~v~~ll~-~~~~~~~n~~g~~Tp~dl~~~~~ 319 (357)
.++.++. +.+++.+|++|+ ||+++|..+.
T Consensus 512 ~v~~e~~k~LL~~GADIN~~d~~G~-TPLh~A~~~g 546 (764)
T PHA02716 512 NIVMDSFVYLLSIQYNINIPTKNGV-TPLMLTMRNN 546 (764)
T ss_pred chhHHHHHHHHhCCCCCcccCCCCC-CHHHHHHHcC
Confidence 3477774 468999999999 9999998655
|
|
| >PHA02946 ankyin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.8e-29 Score=242.67 Aligned_cols=198 Identities=7% Similarity=-0.001 Sum_probs=136.0
Q ss_pred CCCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcC--cHHHHHHHHHcCCCCCCCCCCcc
Q 039985 99 PANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFS--AAELVELFVKKDCTIKGVPNHKK 176 (357)
Q Consensus 99 ~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g--~~~iv~~Ll~~g~~~~~~~~~~~ 176 (357)
..|.|||| ||..|+.++++.|++.+++ .+..|..|+| |||+|+..+ +.+++++|+++|++++
T Consensus 139 ~~g~tpL~-aa~~~~~~vv~~Ll~~gad-------~~~~d~~G~t-~Lh~A~~~~~~~~~~v~~Ll~~Gadin------- 202 (446)
T PHA02946 139 EEGCGPLL-ACTDPSERVFKKIMSIGFE-------ARIVDKFGKN-HIHRHLMSDNPKASTISWMMKLGISPS------- 202 (446)
T ss_pred CCCCcHHH-HHHCCChHHHHHHHhcccc-------ccccCCCCCC-HHHHHHHhcCCCHHHHHHHHHcCCCCc-------
Confidence 34677776 5556777777777777766 5667778888 888877654 4578888888888776
Q ss_pred CCCcCcchHHHHHHHCC--CHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCC-HHHHHHHHhhhccCCc-------
Q 039985 177 DKNWAIRLTLLFAASNG--ITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQ-YKVFELITKEMQLSVP------- 246 (357)
Q Consensus 177 ~~~~~G~TpLh~Aa~~G--~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~-~~iv~~Ll~~~~~~~~------- 246 (357)
.+|..|.||||+|+..| +.+++++|++ |++++ .+|..|+||||+|+..++ .+++++|++......+
T Consensus 203 ~~d~~G~TpLH~Aa~~~~~~~~iv~lLl~-gadin---~~d~~G~TpLh~A~~~~~~~~~~~~Ll~~g~~~~~~~~~~a~ 278 (446)
T PHA02946 203 KPDHDGNTPLHIVCSKTVKNVDIINLLLP-STDVN---KQNKFGDSPLTLLIKTLSPAHLINKLLSTSNVITDQTVNICI 278 (446)
T ss_pred ccCCCCCCHHHHHHHcCCCcHHHHHHHHc-CCCCC---CCCCCCCCHHHHHHHhCChHHHHHHHHhCCCCCCCcHHHHHH
Confidence 55666888888888775 7788888774 77776 788888888888888877 4777777764211000
Q ss_pred ---c-----ccccc-cCCCCcHHHHHHHcCCCCC-------CCCCCChhHHHHHhhhHHHHHHhccC-cccccccccCCC
Q 039985 247 ---K-----WASRI-DKKGYTLLHHVADMKHYKE-------GTRPGPVLQFQEELQLFEHVKEIMPR-HYAMHRDEKNKM 309 (357)
Q Consensus 247 ---~-----~~~~~-d~~G~TpLh~Aa~~g~~~~-------~~~~~t~L~la~~l~~~~~v~~ll~~-~~~~~~n~~g~~ 309 (357)
. .++.+ +..|.||||+|+..|+.+. ...+.|||++|...++.+.++.++.. .+.+.. .+|+
T Consensus 279 ~~~~~~~~e~l~~~g~~~~~TpLh~Aa~~g~~eivk~Ll~~~~~~~t~L~~A~~~~~~~~v~~Ll~~ga~~n~~-~~G~- 356 (446)
T PHA02946 279 FYDRDDVLEIINDKGKQYDSTDFKMAVEVGSIRCVKYLLDNDIICEDAMYYAVLSEYETMVDYLLFNHFSVDSV-VNGH- 356 (446)
T ss_pred HcCchHHHHHHHHcCcccCCCHHHHHHHcCCHHHHHHHHHCCCccccHHHHHHHhCHHHHHHHHHHCCCCCCCc-cccc-
Confidence 0 02222 2357788888888887552 23445888888887777777776643 355554 5788
Q ss_pred CHHHHHhhh
Q 039985 310 TASDLFNLT 318 (357)
Q Consensus 310 Tp~dl~~~~ 318 (357)
||+++|...
T Consensus 357 t~l~~a~~~ 365 (446)
T PHA02946 357 TCMSECVRL 365 (446)
T ss_pred cHHHHHHHc
Confidence 999988643
|
|
| >PHA02874 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.7e-29 Score=243.58 Aligned_cols=203 Identities=13% Similarity=0.135 Sum_probs=175.2
Q ss_pred CCCCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCC-----
Q 039985 98 SPANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVP----- 172 (357)
Q Consensus 98 ~~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~----- 172 (357)
...|.||||.|+..|+.++|++|++.|++ .+..+..|.| |||+|+..|+.+++++|+++|++.....
T Consensus 32 ~~~~~tpL~~A~~~g~~~iv~~Ll~~Ga~-------~n~~~~~~~t-~L~~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~~ 103 (434)
T PHA02874 32 VDETTTPLIDAIRSGDAKIVELFIKHGAD-------INHINTKIPH-PLLTAIKIGAHDIIKLLIDNGVDTSILPIPCIE 103 (434)
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHCCCC-------CCCCCCCCCC-HHHHHHHcCCHHHHHHHHHCCCCCCcchhccCC
Confidence 34588999999999999999999999998 6778899999 9999999999999999999988653211
Q ss_pred -----------CCccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhh
Q 039985 173 -----------NHKKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEM 241 (357)
Q Consensus 173 -----------~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~ 241 (357)
...+.++..|.||||+|+..|+.++|++|+++|++++ .+|..|.||||+|+..|+.+++++|++
T Consensus 104 ~~~i~~ll~~g~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~n---~~d~~g~tpLh~A~~~~~~~iv~~Ll~-- 178 (434)
T PHA02874 104 KDMIKTILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVN---IEDDNGCYPIHIAIKHNFFDIIKLLLE-- 178 (434)
T ss_pred HHHHHHHHHCcCCCCCCCCCCccHHHHHHHCCCHHHHHHHHhCCCCCC---CcCCCCCCHHHHHHHCCcHHHHHHHHH--
Confidence 1112456779999999999999999999999999998 899999999999999999999999998
Q ss_pred ccCCccccccccCCCCcHHHHHHHcCCCCC--------------CCCCCChhHHHHHhhhHHHHHHhccCcccccccccC
Q 039985 242 QLSVPKWASRIDKKGYTLLHHVADMKHYKE--------------GTRPGPVLQFQEELQLFEHVKEIMPRHYAMHRDEKN 307 (357)
Q Consensus 242 ~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~--------------~~~~~t~L~la~~l~~~~~v~~ll~~~~~~~~n~~g 307 (357)
.+++++.+|..|+||||+|+..|+.+. ...+.|||++|...+ ...++.++...+.+.+|.+|
T Consensus 179 ---~g~~~n~~~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~i~~~~~~g~TpL~~A~~~~-~~~i~~Ll~~~~in~~d~~G 254 (434)
T PHA02874 179 ---KGAYANVKDNNGESPLHNAAEYGDYACIKLLIDHGNHIMNKCKNGFTPLHNAIIHN-RSAIELLINNASINDQDIDG 254 (434)
T ss_pred ---CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHCC-hHHHHHHHcCCCCCCcCCCC
Confidence 678899999999999999999998651 234559999998754 35666677667888899999
Q ss_pred CCCHHHHHhhh
Q 039985 308 KMTASDLFNLT 318 (357)
Q Consensus 308 ~~Tp~dl~~~~ 318 (357)
. ||+++|...
T Consensus 255 ~-TpLh~A~~~ 264 (434)
T PHA02874 255 S-TPLHHAINP 264 (434)
T ss_pred C-CHHHHHHhc
Confidence 9 999999753
|
|
| >PHA02791 ankyrin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.3e-29 Score=228.32 Aligned_cols=201 Identities=13% Similarity=0.088 Sum_probs=154.5
Q ss_pred ccchHHHHHHHhhhccccHHHHHHHHHhhhhcccCCCCCCCcCcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 039985 11 EGRPAIKKIWMKKQMHKNANKLLKKLVKEETLCLGDGEQNPEISLLSPESSSTSLPNPEISSSNPESSTSSLPNPEIFSP 90 (357)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~~~~~~d~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (357)
+|++++-.-.. .+..++|+.|++.|++.-..+|.||++.+..... .+.... +...
T Consensus 29 ~G~TpLh~Aa~-----~g~~eiv~~Ll~~ga~~n~~d~~TpLh~Aa~~g~-------~eiV~l-------------LL~~ 83 (284)
T PHA02791 29 HGHSALYYAIA-----DNNVRLVCTLLNAGALKNLLENEFPLHQAATLED-------TKIVKI-------------LLFS 83 (284)
T ss_pred CCCcHHHHHHH-----cCCHHHHHHHHHCcCCCcCCCCCCHHHHHHHCCC-------HHHHHH-------------HHHC
Confidence 46776644332 3457899999999988333457888885433222 000000 0011
Q ss_pred CCCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCC
Q 039985 91 DPESSTTSPANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKG 170 (357)
Q Consensus 91 ~~~~~~~~~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~ 170 (357)
..+.+..+..|.||||+|+..|+.++++.|++.+++ .+..+..|.++|||+|+..|+.++|++|++++++..
T Consensus 84 Gadvn~~d~~G~TpLh~Aa~~g~~eivk~Ll~~gad-------in~~~~~g~~TpL~~Aa~~g~~eivk~LL~~~~~~~- 155 (284)
T PHA02791 84 GMDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWR-------LMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTF- 155 (284)
T ss_pred CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-------cCccCCCCCcHHHHHHHHcCCHHHHHHHHhcCCccc-
Confidence 122233455699999999999999999999999998 566778886349999999999999999999876532
Q ss_pred CCCCccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChH-HHHHHHcCCHHHHHHHHhhhccCCcccc
Q 039985 171 VPNHKKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNI-LHVAVKRRQYKVFELITKEMQLSVPKWA 249 (357)
Q Consensus 171 ~~~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~Tp-Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~ 249 (357)
+ . ..|.||||+||++|+.+++++|+++|++++ .+|..|.|| ||+|+.+|+.++|++|++ .|+++
T Consensus 156 --d---~--~~g~TpLh~Aa~~g~~eiv~lLL~~gAd~n---~~d~~g~t~~L~~Aa~~~~~e~v~lLl~-----~Ga~i 220 (284)
T PHA02791 156 --D---L--AILLSCIHITIKNGHVDMMILLLDYMTSTN---TNNSLLFIPDIKLAIDNKDLEMLQALFK-----YDINI 220 (284)
T ss_pred --c---c--ccCccHHHHHHHcCCHHHHHHHHHCCCCCC---cccCCCCChHHHHHHHcCCHHHHHHHHH-----CCCCC
Confidence 1 0 138999999999999999999999999998 899999987 999999999999999998 78999
Q ss_pred ccccCCCCcHH
Q 039985 250 SRIDKKGYTLL 260 (357)
Q Consensus 250 ~~~d~~G~TpL 260 (357)
|.+|..| |||
T Consensus 221 n~~~~~~-~~l 230 (284)
T PHA02791 221 YSVNLEN-VLL 230 (284)
T ss_pred ccCcccC-ccC
Confidence 9999854 666
|
|
| >PHA03100 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.9e-29 Score=246.75 Aligned_cols=195 Identities=16% Similarity=0.072 Sum_probs=113.9
Q ss_pred CCCHHHH-----HHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHH--hcCcHHHHHHHHHcCCCCCCCCC
Q 039985 101 NISTISL-----GLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFV--DFSAAELVELFVKKDCTIKGVPN 173 (357)
Q Consensus 101 g~t~Lh~-----A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~--~~g~~~iv~~Ll~~g~~~~~~~~ 173 (357)
|.||||+ |+..|+.++++.|++.+++ .+..|..|.| |||+|+ ..|+.+++++|+++|++++
T Consensus 68 ~~t~L~~~~~~~a~~~~~~~iv~~Ll~~ga~-------i~~~d~~g~t-pL~~A~~~~~~~~~iv~~Ll~~g~~~~---- 135 (480)
T PHA03100 68 NSTPLHYLSNIKYNLTDVKEIVKLLLEYGAN-------VNAPDNNGIT-PLLYAISKKSNSYSIVEYLLDNGANVN---- 135 (480)
T ss_pred CcCHHHHHHHHHHHhhchHHHHHHHHHCCCC-------CCCCCCCCCc-hhhHHHhcccChHHHHHHHHHcCCCCC----
Confidence 4555555 5555555555555555555 3445555555 555555 5555555555555555544
Q ss_pred CccCCCcCcchHHHHHHHCC--CHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCcccccc
Q 039985 174 HKKDKNWAIRLTLLFAASNG--ITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASR 251 (357)
Q Consensus 174 ~~~~~~~~G~TpLh~Aa~~G--~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~ 251 (357)
.++..|.||||+|+..| +.+++++|+++|++++ .+|..|.||||+|+..|+.+++++|++ .+++++.
T Consensus 136 ---~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g~din---~~d~~g~tpL~~A~~~~~~~iv~~Ll~-----~ga~~~~ 204 (480)
T PHA03100 136 ---IKNSDGENLLHLYLESNKIDLKILKLLIDKGVDIN---AKNRYGYTPLHIAVEKGNIDVIKFLLD-----NGADINA 204 (480)
T ss_pred ---ccCCCCCcHHHHHHHcCCChHHHHHHHHHCCCCcc---cccCCCCCHHHHHHHhCCHHHHHHHHH-----cCCCccC
Confidence 33334555555555555 5555555555555555 555555555555555555555555555 4455555
Q ss_pred ccCCC------CcHHHHHHHcCC--CC--------------CCCCCCChhHHHHHhhhHHHHHHhcc-CcccccccccCC
Q 039985 252 IDKKG------YTLLHHVADMKH--YK--------------EGTRPGPVLQFQEELQLFEHVKEIMP-RHYAMHRDEKNK 308 (357)
Q Consensus 252 ~d~~G------~TpLh~Aa~~g~--~~--------------~~~~~~t~L~la~~l~~~~~v~~ll~-~~~~~~~n~~g~ 308 (357)
.+..| .||||+|+..|+ .+ ....+.|||+.|...+..+.++.++. +.+.+.+|..|.
T Consensus 205 ~~~~~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~~g~din~~d~~g~TpL~~A~~~~~~~iv~~Ll~~gad~n~~d~~g~ 284 (480)
T PHA03100 205 GDIETLLFTIFETPLHIAACYNEITLEVVNYLLSYGVPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGD 284 (480)
T ss_pred CCCCCCcHHHHHhHHHHHHHhCcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCC
Confidence 55555 555555555555 21 01223355555555555667777774 457889999999
Q ss_pred CCHHHHHhhhh
Q 039985 309 MTASDLFNLTH 319 (357)
Q Consensus 309 ~Tp~dl~~~~~ 319 (357)
||+++|....
T Consensus 285 -tpl~~A~~~~ 294 (480)
T PHA03100 285 -TPLHIAILNN 294 (480)
T ss_pred -cHHHHHHHhC
Confidence 9999997533
|
|
| >PHA02875 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.2e-28 Score=236.17 Aligned_cols=195 Identities=15% Similarity=0.070 Sum_probs=171.5
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCc
Q 039985 101 NISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNW 180 (357)
Q Consensus 101 g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~ 180 (357)
.+++||.|+..|+.+++++|++.|++ .+..+..|.| |||+|+..|+.++|++|+++|++++ .++.
T Consensus 2 ~~~~L~~A~~~g~~~iv~~Ll~~g~~-------~n~~~~~g~t-pL~~A~~~~~~~~v~~Ll~~ga~~~-------~~~~ 66 (413)
T PHA02875 2 DQVALCDAILFGELDIARRLLDIGIN-------PNFEIYDGIS-PIKLAMKFRDSEAIKLLMKHGAIPD-------VKYP 66 (413)
T ss_pred CchHHHHHHHhCCHHHHHHHHHCCCC-------CCccCCCCCC-HHHHHHHcCCHHHHHHHHhCCCCcc-------ccCC
Confidence 46899999999999999999999988 6778889999 9999999999999999999999876 3444
Q ss_pred CcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcHH
Q 039985 181 AIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTLL 260 (357)
Q Consensus 181 ~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpL 260 (357)
.|.||||+|+..|+.++|++|++.|++.. +..+.+|+||||+|+..|+.+++++|++ .|++++.+|.+|.|||
T Consensus 67 ~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~--~~~~~~g~tpL~~A~~~~~~~iv~~Ll~-----~gad~~~~~~~g~tpL 139 (413)
T PHA02875 67 DIESELHDAVEEGDVKAVEELLDLGKFAD--DVFYKDGMTPLHLATILKKLDIMKLLIA-----RGADPDIPNTDKFSPL 139 (413)
T ss_pred CcccHHHHHHHCCCHHHHHHHHHcCCccc--ccccCCCCCHHHHHHHhCCHHHHHHHHh-----CCCCCCCCCCCCCCHH
Confidence 58999999999999999999999999887 5778899999999999999999999988 7889999999999999
Q ss_pred HHHHHcCCCCC--------------CCCCCChhHHHHHhhhHHHHHHhcc-CcccccccccCCCCHHHHHhh
Q 039985 261 HHVADMKHYKE--------------GTRPGPVLQFQEELQLFEHVKEIMP-RHYAMHRDEKNKMTASDLFNL 317 (357)
Q Consensus 261 h~Aa~~g~~~~--------------~~~~~t~L~la~~l~~~~~v~~ll~-~~~~~~~n~~g~~Tp~dl~~~ 317 (357)
|+|+..|+.+. ...+.|||++|...+..+.++.++. +.+.+..+..|..||+.+|..
T Consensus 140 h~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~g~~eiv~~Ll~~ga~~n~~~~~~~~t~l~~A~~ 211 (413)
T PHA02875 140 HLAVMMGDIKGIELLIDHKACLDIEDCCGCTPLIIAMAKGDIAICKMLLDSGANIDYFGKNGCVAALCYAIE 211 (413)
T ss_pred HHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCcCCCCCCchHHHHHHH
Confidence 99999998651 2345599999999999988888884 457777887775378886764
|
|
| >PHA02876 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.1e-28 Score=251.13 Aligned_cols=198 Identities=9% Similarity=0.023 Sum_probs=168.5
Q ss_pred CCCCCCCCHHHHHHhcCCH-HHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcC-cHHHHHHHHHcCCCCCCCCC
Q 039985 96 TTSPANISTISLGLGKGNM-LKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFS-AAELVELFVKKDCTIKGVPN 173 (357)
Q Consensus 96 ~~~~~g~t~Lh~A~~~g~~-~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g-~~~iv~~Ll~~g~~~~~~~~ 173 (357)
..+..|.||||+|+..|+. ++++.|++.+++ .+..|.+|.| |||+|+..| ..+++++|+..|++++
T Consensus 268 ~~d~~g~TpLh~Aa~~~~~~~iv~lLl~~gad-------in~~d~~g~T-pLh~Aa~~g~~~~~v~~Ll~~gadin---- 335 (682)
T PHA02876 268 SIDDCKNTPLHHASQAPSLSRLVPKLLERGAD-------VNAKNIKGET-PLYLMAKNGYDTENIRTLIMLGADVN---- 335 (682)
T ss_pred CCCCCCCCHHHHHHhCCCHHHHHHHHHHCCCC-------CCCcCCCCCC-HHHHHHHhCCCHHHHHHHHHcCCCCC----
Confidence 3445699999999999996 688999999988 7778999999 999999999 5999999999999987
Q ss_pred CccCCCcCcchHHHHHHHC-CCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccc
Q 039985 174 HKKDKNWAIRLTLLFAASN-GITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRI 252 (357)
Q Consensus 174 ~~~~~~~~G~TpLh~Aa~~-G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~ 252 (357)
.+|..|.||||+|+.. ++.+++++|+++|++++ .+|..|+||||+|+..|+.+++++|++ .+++++..
T Consensus 336 ---~~d~~g~TpLh~A~~~~~~~~iv~lLl~~gadin---~~d~~G~TpLh~Aa~~~~~~iv~~Ll~-----~gad~~~~ 404 (682)
T PHA02876 336 ---AADRLYITPLHQASTLDRNKDIVITLLELGANVN---ARDYCDKTPIHYAAVRNNVVIINTLLD-----YGADIEAL 404 (682)
T ss_pred ---CcccCCCcHHHHHHHhCCcHHHHHHHHHcCCCCc---cCCCCCCCHHHHHHHcCCHHHHHHHHH-----CCCCcccc
Confidence 5566699999999985 57899999999999998 999999999999999999999999988 78899999
Q ss_pred cCCCCcHHHHHHHcCCCC---------------CCCCCCChhHHHHHhh-hHHHHHHhcc-CcccccccccCCCCHHHHH
Q 039985 253 DKKGYTLLHHVADMKHYK---------------EGTRPGPVLQFQEELQ-LFEHVKEIMP-RHYAMHRDEKNKMTASDLF 315 (357)
Q Consensus 253 d~~G~TpLh~Aa~~g~~~---------------~~~~~~t~L~la~~l~-~~~~v~~ll~-~~~~~~~n~~g~~Tp~dl~ 315 (357)
+..|.||||+|+..++.. ....+.|||++|...+ ..+.++.++. +.+.+.+|..|. ||+.++
T Consensus 405 ~~~g~T~Lh~A~~~~~~~~~vk~Ll~~gadin~~d~~G~TpLh~Aa~~~~~~~iv~lLl~~Gad~n~~d~~g~-tpl~~a 483 (682)
T PHA02876 405 SQKIGTALHFALCGTNPYMSVKTLIDRGANVNSKNKDLSTPLHYACKKNCKLDVIEMLLDNGADVNAINIQNQ-YPLLIA 483 (682)
T ss_pred CCCCCchHHHHHHcCCHHHHHHHHHhCCCCCCcCCCCCChHHHHHHHhCCcHHHHHHHHHCCCCCCCCCCCCC-CHHHHH
Confidence 999999999999776532 2345569999998765 3566666663 458889999999 999988
Q ss_pred hh
Q 039985 316 NL 317 (357)
Q Consensus 316 ~~ 317 (357)
..
T Consensus 484 ~~ 485 (682)
T PHA02876 484 LE 485 (682)
T ss_pred HH
Confidence 64
|
|
| >PHA02859 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.6e-28 Score=213.16 Aligned_cols=173 Identities=14% Similarity=0.115 Sum_probs=146.3
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcC--cHHHHHHHHHcCCCCCCCCCCccCC
Q 039985 101 NISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFS--AAELVELFVKKDCTIKGVPNHKKDK 178 (357)
Q Consensus 101 g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g--~~~iv~~Ll~~g~~~~~~~~~~~~~ 178 (357)
+.||||+|+..|+.++|+.|++.. +..|..|.| |||+|+..+ +.+++++|+++|++++ .+
T Consensus 21 ~~~pL~~A~~~~~~~~vk~Li~~~----------n~~~~~g~T-pLh~a~~~~~~~~eiv~~Ll~~gadvn-------~~ 82 (209)
T PHA02859 21 YCNPLFYYVEKDDIEGVKKWIKFV----------NDCNDLYET-PIFSCLEKDKVNVEILKFLIENGADVN-------FK 82 (209)
T ss_pred cCcHHHHHHHhCcHHHHHHHHHhh----------hccCccCCC-HHHHHHHcCCCCHHHHHHHHHCCCCCC-------cc
Confidence 679999999999999999999752 347889999 999999854 8999999999999998 33
Q ss_pred C-cCcchHHHHHHHC---CCHHHHHHHHhhCCCcccccccCCCCChHHHHHHH--cCCHHHHHHHHhhhccCCccccccc
Q 039985 179 N-WAIRLTLLFAASN---GITEILKEIIHQHPQAILLDNLNEKEQNILHVAVK--RRQYKVFELITKEMQLSVPKWASRI 252 (357)
Q Consensus 179 ~-~~G~TpLh~Aa~~---G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~--~g~~~iv~~Ll~~~~~~~~~~~~~~ 252 (357)
+ ..|.||||+|+.. ++.+++++|+++|++++ .+|..|+||||+|+. .++.+++++|++ .+++++.+
T Consensus 83 ~~~~g~TpLh~a~~~~~~~~~eiv~~Ll~~gadin---~~d~~G~TpLh~a~~~~~~~~~iv~~Li~-----~gadin~~ 154 (209)
T PHA02859 83 TRDNNLSALHHYLSFNKNVEPEILKILIDSGSSIT---EEDEDGKNLLHMYMCNFNVRINVIKLLID-----SGVSFLNK 154 (209)
T ss_pred CCCCCCCHHHHHHHhCccccHHHHHHHHHCCCCCC---CcCCCCCCHHHHHHHhccCCHHHHHHHHH-----cCCCcccc
Confidence 3 3589999998864 58999999999999998 999999999999986 468999999988 78899999
Q ss_pred cCCCCcHHHHH-HHcCCCCCCCCCCChhHHHHHhhhHHHHHHhc-cCcccccccccCCCCHHHHHhhhh
Q 039985 253 DKKGYTLLHHV-ADMKHYKEGTRPGPVLQFQEELQLFEHVKEIM-PRHYAMHRDEKNKMTASDLFNLTH 319 (357)
Q Consensus 253 d~~G~TpLh~A-a~~g~~~~~~~~~t~L~la~~l~~~~~v~~ll-~~~~~~~~n~~g~~Tp~dl~~~~~ 319 (357)
|.+|+||||.+ +..++ .+.++.++ .+.+.+.+|..|+ ||+++|..+.
T Consensus 155 d~~g~t~Lh~~a~~~~~-------------------~~iv~~Ll~~Gadi~~~d~~g~-tpl~la~~~~ 203 (209)
T PHA02859 155 DFDNNNILYSYILFHSD-------------------KKIFDFLTSLGIDINETNKSGY-NCYDLIKFRN 203 (209)
T ss_pred cCCCCcHHHHHHHhcCC-------------------HHHHHHHHHcCCCCCCCCCCCC-CHHHHHhhhh
Confidence 99999999965 44444 23455555 3457889999999 9999997543
|
|
| >PHA02876 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-27 Score=247.16 Aligned_cols=215 Identities=12% Similarity=0.053 Sum_probs=146.5
Q ss_pred CCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCC
Q 039985 92 PESSTTSPANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGV 171 (357)
Q Consensus 92 ~~~~~~~~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~ 171 (357)
.+.+..+..|.||||+||..|+.++|++|++.|++ .+..+..|.| |||+|+..|+.+++++|++.++++...
T Consensus 169 advn~~d~~G~TpLh~Aa~~G~~~iv~~LL~~Gad-------~n~~~~~g~t-~L~~A~~~~~~~ivk~Ll~~~~~~~~~ 240 (682)
T PHA02876 169 ADVNAKDIYCITPIHYAAERGNAKMVNLLLSYGAD-------VNIIALDDLS-VLECAVDSKNIDTIKAIIDNRSNINKN 240 (682)
T ss_pred CCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCC-------cCccCCCCCC-HHHHHHHcCCHHHHHHHHhcCCCCCCC
Confidence 34455566799999999999999999999999998 6777888999 999999999998888887766544311
Q ss_pred C----------------------CCccCCCcCcchHHHHHHHCCCH-HHHHHHHhhCCCcccccccCCCCChHHHHHHHc
Q 039985 172 P----------------------NHKKDKNWAIRLTLLFAASNGIT-EILKEIIHQHPQAILLDNLNEKEQNILHVAVKR 228 (357)
Q Consensus 172 ~----------------------~~~~~~~~~G~TpLh~Aa~~G~~-~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~ 228 (357)
. ...+.++..|.||||+||..|+. +++++|+++|++++ .+|.+|+||||+|+..
T Consensus 241 ~~~L~~ai~~~~~~~~~~Ll~~g~~vn~~d~~g~TpLh~Aa~~~~~~~iv~lLl~~gadin---~~d~~g~TpLh~Aa~~ 317 (682)
T PHA02876 241 DLSLLKAIRNEDLETSLLLYDAGFSVNSIDDCKNTPLHHASQAPSLSRLVPKLLERGADVN---AKNIKGETPLYLMAKN 317 (682)
T ss_pred cHHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhCCCHHHHHHHHHHCCCCCC---CcCCCCCCHHHHHHHh
Confidence 0 01114455688888888888876 57888888888877 7788888888888877
Q ss_pred C-CHHHHHHHHhhhc-----------------------------cCCccccccccCCCCcHHHHHHHcCCCC--------
Q 039985 229 R-QYKVFELITKEMQ-----------------------------LSVPKWASRIDKKGYTLLHHVADMKHYK-------- 270 (357)
Q Consensus 229 g-~~~iv~~Ll~~~~-----------------------------~~~~~~~~~~d~~G~TpLh~Aa~~g~~~-------- 270 (357)
| ..+++++|+.... +..+++++.+|..|+||||+|+..|+.+
T Consensus 318 g~~~~~v~~Ll~~gadin~~d~~g~TpLh~A~~~~~~~~iv~lLl~~gadin~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~ 397 (682)
T PHA02876 318 GYDTENIRTLIMLGADVNAADRLYITPLHQASTLDRNKDIVITLLELGANVNARDYCDKTPIHYAAVRNNVVIINTLLDY 397 (682)
T ss_pred CCCHHHHHHHHHcCCCCCCcccCCCcHHHHHHHhCCcHHHHHHHHHcCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHC
Confidence 7 3666666655200 0034455555555555555555555533
Q ss_pred ------CCCCCCChhHHHHHhhh-HHHHHHhcc-CcccccccccCCCCHHHHHhhh
Q 039985 271 ------EGTRPGPVLQFQEELQL-FEHVKEIMP-RHYAMHRDEKNKMTASDLFNLT 318 (357)
Q Consensus 271 ------~~~~~~t~L~la~~l~~-~~~v~~ll~-~~~~~~~n~~g~~Tp~dl~~~~ 318 (357)
....++|||++|...+. ...++.++. +.+.+.+|.+|. ||+++|...
T Consensus 398 gad~~~~~~~g~T~Lh~A~~~~~~~~~vk~Ll~~gadin~~d~~G~-TpLh~Aa~~ 452 (682)
T PHA02876 398 GADIEALSQKIGTALHFALCGTNPYMSVKTLIDRGANVNSKNKDLS-TPLHYACKK 452 (682)
T ss_pred CCCccccCCCCCchHHHHHHcCCHHHHHHHHHhCCCCCCcCCCCCC-hHHHHHHHh
Confidence 12233466666654332 233444443 346778888898 999998754
|
|
| >PHA03100 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-27 Score=237.05 Aligned_cols=230 Identities=13% Similarity=0.109 Sum_probs=188.9
Q ss_pred ccccHHHHHHHHHhhhhc--ccCCCCCCCcCc-----CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 039985 25 MHKNANKLLKKLVKEETL--CLGDGEQNPEIS-----LLSPESSSTSLPNPEISSSNPESSTSSLPNPEIFSPDPESSTT 97 (357)
Q Consensus 25 ~~~~~~~iv~~Ll~~~~~--~~d~~g~~p~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (357)
...+..++|+.||+.|++ ..+.+|.+|++. +..... .+.... +.....+.+..
T Consensus 43 ~~~~~~~ivk~Ll~~g~~~~~~~~~~~t~L~~~~~~~a~~~~~-------~~iv~~-------------Ll~~ga~i~~~ 102 (480)
T PHA03100 43 KEARNIDVVKILLDNGADINSSTKNNSTPLHYLSNIKYNLTDV-------KEIVKL-------------LLEYGANVNAP 102 (480)
T ss_pred hccCCHHHHHHHHHcCCCCCCccccCcCHHHHHHHHHHHhhch-------HHHHHH-------------HHHCCCCCCCC
Confidence 344668999999999999 778889999884 221111 000000 00111122334
Q ss_pred CCCCCCHHHHHH--hcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcC--cHHHHHHHHHcCCCCCCCCC
Q 039985 98 SPANISTISLGL--GKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFS--AAELVELFVKKDCTIKGVPN 173 (357)
Q Consensus 98 ~~~g~t~Lh~A~--~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g--~~~iv~~Ll~~g~~~~~~~~ 173 (357)
+..|.||||+|+ ..|+.++++.|++.+++ .+..+..|.| |||+|+..| +.+++++|+++|++++
T Consensus 103 d~~g~tpL~~A~~~~~~~~~iv~~Ll~~g~~-------~~~~~~~g~t-~L~~A~~~~~~~~~iv~~Ll~~g~din---- 170 (480)
T PHA03100 103 DNNGITPLLYAISKKSNSYSIVEYLLDNGAN-------VNIKNSDGEN-LLHLYLESNKIDLKILKLLIDKGVDIN---- 170 (480)
T ss_pred CCCCCchhhHHHhcccChHHHHHHHHHcCCC-------CCccCCCCCc-HHHHHHHcCCChHHHHHHHHHCCCCcc----
Confidence 456999999999 99999999999999998 7778999999 999999999 9999999999999987
Q ss_pred CccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCC------ChHHHHHHHcCC--HHHHHHHHhhhccCC
Q 039985 174 HKKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKE------QNILHVAVKRRQ--YKVFELITKEMQLSV 245 (357)
Q Consensus 174 ~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G------~TpLh~A~~~g~--~~iv~~Ll~~~~~~~ 245 (357)
.++..|.||||+|+..|+.+++++|+++|+++. ..+..| .||||+|+..|+ .+++++|++ .
T Consensus 171 ---~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~---~~~~~~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~-----~ 239 (480)
T PHA03100 171 ---AKNRYGYTPLHIAVEKGNIDVIKFLLDNGADIN---AGDIETLLFTIFETPLHIAACYNEITLEVVNYLLS-----Y 239 (480)
T ss_pred ---cccCCCCCHHHHHHHhCCHHHHHHHHHcCCCcc---CCCCCCCcHHHHHhHHHHHHHhCcCcHHHHHHHHH-----c
Confidence 455569999999999999999999999999998 888888 999999999999 999999988 6
Q ss_pred ccccccccCCCCcHHHHHHHcCCCCC--------------CCCCCChhHHHHHhhhHHHHHHhccC
Q 039985 246 PKWASRIDKKGYTLLHHVADMKHYKE--------------GTRPGPVLQFQEELQLFEHVKEIMPR 297 (357)
Q Consensus 246 ~~~~~~~d~~G~TpLh~Aa~~g~~~~--------------~~~~~t~L~la~~l~~~~~v~~ll~~ 297 (357)
|++++.+|..|.||||+|+..|+.+. ...+.||+++|...+..+.++.++..
T Consensus 240 g~din~~d~~g~TpL~~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpl~~A~~~~~~~iv~~Ll~~ 305 (480)
T PHA03100 240 GVPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHIAILNNNKEIFKLLLNN 305 (480)
T ss_pred CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHhCCHHHHHHHHhc
Confidence 88999999999999999999998651 23455999999988888888887743
|
|
| >KOG0510 consensus Ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.5e-28 Score=237.28 Aligned_cols=252 Identities=14% Similarity=0.114 Sum_probs=198.6
Q ss_pred cHHHHHHHHHhhhhc--ccCCCCCCCcCcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
Q 039985 28 NANKLLKKLVKEETL--CLGDGEQNPEISLLSPESSSTSLPNPEISSSNPESSTSSLPNPEIFSPDPESSTTSPANISTI 105 (357)
Q Consensus 28 ~~~~iv~~Ll~~~~~--~~d~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L 105 (357)
+.-++|+.|++.|++ ..+..+..|++-+..... .+.+. -...-..+.+-.+..|.|||
T Consensus 99 ~~~~~i~~Lls~gad~~~~n~~~~aplh~A~~~~~------------------~s~L~--~Ll~~~~dvnl~de~~~TpL 158 (929)
T KOG0510|consen 99 NQGDKIQVLLSYGADTPLRNLNKNAPLHLAADSGN------------------YSCLK--LLLDYGADVNLEDENGFTPL 158 (929)
T ss_pred chHHHHHHHHhcCCCCChhhhhccCchhhccccch------------------HHHHH--HHHHhcCCccccccCCCchh
Confidence 445789999999999 667778888772211100 00000 00011134455566799999
Q ss_pred HHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHH-----cCCCCCCCCCCccCCCc
Q 039985 106 SLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVK-----KDCTIKGVPNHKKDKNW 180 (357)
Q Consensus 106 h~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~-----~g~~~~~~~~~~~~~~~ 180 (357)
|.||..++.+..+.|++.+++ +...|.+|++ |+|.|++.|..++.|.++. ++..++ .-|.
T Consensus 159 h~A~~~~~~E~~k~Li~~~a~-------~~K~~~~~~~-~iH~aa~s~s~e~mEi~l~~~g~~r~~~in-------~~~n 223 (929)
T KOG0510|consen 159 HLAARKNKVEAKKELINKGAD-------PCKSDIDGNF-PIHEAARSGSKECMEIFLPEHGYERQTHIN-------FDNN 223 (929)
T ss_pred hHHHhcChHHHHHHHHhcCCC-------CCcccCcCCc-hHHHHHHhcchhhhhhhhccccchhhcccc-------cccC
Confidence 999999999988999999999 7888999999 9999999999999999998 444444 3344
Q ss_pred CcchHHHHHHHCCCHHHHHHHHhhCCCccc------------ccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccc
Q 039985 181 AIRLTLLFAASNGITEILKEIIHQHPQAIL------------LDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKW 248 (357)
Q Consensus 181 ~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~------------~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~ 248 (357)
.|.||||.|+..|++++++.+|+.+..... ++..|++|.||||+||+.|+.+.++.|+. .|++
T Consensus 224 ~~~~pLhlAve~g~~e~lk~~L~n~~~~a~~~~~~~~q~kelv~~~d~dg~tpLH~a~r~G~~~svd~Ll~-----~Ga~ 298 (929)
T KOG0510|consen 224 EKATPLHLAVEGGDIEMLKMCLQNGKKIADVQLDAMQQEKELVNDEDNDGCTPLHYAARQGGPESVDNLLG-----FGAS 298 (929)
T ss_pred CCCcchhhhhhcCCHHHHHHHHhCccccchhhhHHHHHHHHHhhcccccCCchHHHHHHcCChhHHHHHHH-----cCCc
Confidence 589999999999999999999998875531 24669999999999999999999999988 7999
Q ss_pred cccccCCCCcHHHHHHHcCCCCC----------------CCCCCChhHHHHHhhhHHHHHHhccCc-ccc---cccccCC
Q 039985 249 ASRIDKKGYTLLHHVADMKHYKE----------------GTRPGPVLQFQEELQLFEHVKEIMPRH-YAM---HRDEKNK 308 (357)
Q Consensus 249 ~~~~d~~G~TpLh~Aa~~g~~~~----------------~~~~~t~L~la~~l~~~~~v~~ll~~~-~~~---~~n~~g~ 308 (357)
++.+++++.||||.||.+|+... ...+.||||++..-+..++++.++..+ +.. .+|.+|.
T Consensus 299 I~~kn~d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~~g~tpLHlaa~~gH~~v~qlLl~~GA~~~~~~e~D~dg~ 378 (929)
T KOG0510|consen 299 INSKNKDEESPLHFAAIYGRINTVERLLQESDTRLLNESDLHGMTPLHLAAKSGHDRVVQLLLNKGALFLNMSEADSDGN 378 (929)
T ss_pred ccccCCCCCCchHHHHHcccHHHHHHHHhCcCccccccccccCCCchhhhhhcCHHHHHHHHHhcChhhhcccccccCCc
Confidence 99999999999999999998541 122349999999999999999998655 332 3489999
Q ss_pred CCHHHHHhhhhH
Q 039985 309 MTASDLFNLTHE 320 (357)
Q Consensus 309 ~Tp~dl~~~~~~ 320 (357)
||+++|.....
T Consensus 379 -TaLH~Aa~~g~ 389 (929)
T KOG0510|consen 379 -TALHLAAKYGN 389 (929)
T ss_pred -hhhhHHHHhcc
Confidence 99999985443
|
|
| >PHA02989 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.1e-27 Score=232.82 Aligned_cols=250 Identities=10% Similarity=0.029 Sum_probs=189.2
Q ss_pred cHHHHHHHHHhhhhc--ccCCCCCCCcCcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
Q 039985 28 NANKLLKKLVKEETL--CLGDGEQNPEISLLSPESSSTSLPNPEISSSNPESSTSSLPNPEIFSPDPESSTTSPANISTI 105 (357)
Q Consensus 28 ~~~~iv~~Ll~~~~~--~~d~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L 105 (357)
-..++|+.||+.|++ .. ..|.+|++........ ..+......+. ..+.+..+ .+.|||
T Consensus 14 ~~~~~v~~LL~~GadvN~~-~~g~t~l~~~~~~~~~-----~~~iv~~Ll~~-------------GAdvn~~~-~~~tpL 73 (494)
T PHA02989 14 VDKNALEFLLRTGFDVNEE-YRGNSILLLYLKRKDV-----KIKIVKLLIDN-------------GADVNYKG-YIETPL 73 (494)
T ss_pred CcHHHHHHHHHcCCCcccc-cCCCCHHHHHHhcCCC-----ChHHHHHHHHc-------------CCCccCCC-CCCCcH
Confidence 456899999999999 44 5677776532221110 00000000000 11111111 368999
Q ss_pred HHHHhcC------CHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhc---CcHHHHHHHHHcCCCCCCCCCCcc
Q 039985 106 SLGLGKG------NMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDF---SAAELVELFVKKDCTIKGVPNHKK 176 (357)
Q Consensus 106 h~A~~~g------~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~---g~~~iv~~Ll~~g~~~~~~~~~~~ 176 (357)
|.|+.++ +.+++++|++.|++ .+..|..|.| |||.|+.. |+.++|++|+++|++++.
T Consensus 74 ~~a~~~~~~~~~~~~~iv~~Ll~~Gad-------in~~d~~g~t-pL~~a~~~~~~~~~eiv~~Ll~~Gadin~------ 139 (494)
T PHA02989 74 CAVLRNREITSNKIKKIVKLLLKFGAD-------INLKTFNGVS-PIVCFIYNSNINNCDMLRFLLSKGINVND------ 139 (494)
T ss_pred HHHHhccCcchhhHHHHHHHHHHCCCC-------CCCCCCCCCc-HHHHHHHhcccCcHHHHHHHHHCCCCccc------
Confidence 9998765 47899999999998 7888999999 99988765 679999999999999831
Q ss_pred CCCcCcchHHHHHHHC--CCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcC----CHHHHHHHHhhhccCCccccc
Q 039985 177 DKNWAIRLTLLFAASN--GITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRR----QYKVFELITKEMQLSVPKWAS 250 (357)
Q Consensus 177 ~~~~~G~TpLh~Aa~~--G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g----~~~iv~~Ll~~~~~~~~~~~~ 250 (357)
.+|..|+||||+|+.. ++.++|++|+++|+++. ...+..|.||||+|+..+ +.+++++|++ .|++++
T Consensus 140 ~~d~~g~tpLh~a~~~~~~~~~iv~~Ll~~Gadi~--~~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~-----~Ga~vn 212 (494)
T PHA02989 140 VKNSRGYNLLHMYLESFSVKKDVIKILLSFGVNLF--EKTSLYGLTPMNIYLRNDIDVISIKVIKYLIK-----KGVNIE 212 (494)
T ss_pred ccCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcc--ccccccCCChHHHHHhcccccccHHHHHHHHh-----CCCCcc
Confidence 4555699999998764 68999999999999998 337889999999998765 8999999988 788999
Q ss_pred cccCCCCcHHHHHHHcCCC------------------C-CCCCCCChhHHHHHhhhHHHHHHhcc-CcccccccccCCCC
Q 039985 251 RIDKKGYTLLHHVADMKHY------------------K-EGTRPGPVLQFQEELQLFEHVKEIMP-RHYAMHRDEKNKMT 310 (357)
Q Consensus 251 ~~d~~G~TpLh~Aa~~g~~------------------~-~~~~~~t~L~la~~l~~~~~v~~ll~-~~~~~~~n~~g~~T 310 (357)
.+|..|.||||.++..+.. . ....+.|||+.|...+..+.++.++. +.+.+.+|..|. |
T Consensus 213 ~~~~~~~t~l~~~~~~~~~~~~~~~~il~~l~~~advn~~d~~G~TpL~~Aa~~~~~~~v~~LL~~Gadin~~d~~G~-T 291 (494)
T PHA02989 213 TNNNGSESVLESFLDNNKILSKKEFKVLNFILKYIKINKKDKKGFNPLLISAKVDNYEAFNYLLKLGDDIYNVSKDGD-T 291 (494)
T ss_pred ccCCccccHHHHHHHhchhhcccchHHHHHHHhCCCCCCCCCCCCCHHHHHHHhcCHHHHHHHHHcCCCccccCCCCC-C
Confidence 9999999999988765421 1 13345699999999888888998884 458899999999 9
Q ss_pred HHHHHhhhh
Q 039985 311 ASDLFNLTH 319 (357)
Q Consensus 311 p~dl~~~~~ 319 (357)
|+++|....
T Consensus 292 pL~~A~~~~ 300 (494)
T PHA02989 292 VLTYAIKHG 300 (494)
T ss_pred HHHHHHHcC
Confidence 999997543
|
|
| >PHA03095 ankyrin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.8e-27 Score=231.45 Aligned_cols=201 Identities=13% Similarity=0.078 Sum_probs=171.9
Q ss_pred CCCCCCCCCCHHHHHHhcC---CHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcC-cHHHHHHHHHcCCCCC
Q 039985 94 SSTTSPANISTISLGLGKG---NMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFS-AAELVELFVKKDCTIK 169 (357)
Q Consensus 94 ~~~~~~~g~t~Lh~A~~~g---~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g-~~~iv~~Ll~~g~~~~ 169 (357)
.+..+..|.||||+|+..| +.++++.|++.|++ .+..+..|.| |||+|+..| +.+++++|+++|++++
T Consensus 40 vn~~~~~g~t~Lh~a~~~~~~~~~~iv~~Ll~~Gad-------in~~~~~g~T-pLh~A~~~~~~~~iv~lLl~~ga~in 111 (471)
T PHA03095 40 VNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLEAGAD-------VNAPERCGFT-PLHLYLYNATTLDVIKLLIKAGADVN 111 (471)
T ss_pred cccCCCCCCCHHHHHHHhcCCChHHHHHHHHHCCCC-------CCCCCCCCCC-HHHHHHHcCCcHHHHHHHHHcCCCCC
Confidence 3445667999999999999 99999999999998 7888899999 999999999 5999999999999987
Q ss_pred CCCCCccCCCcCcchHHHHHH--HCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcC--CHHHHHHHHhhhccCC
Q 039985 170 GVPNHKKDKNWAIRLTLLFAA--SNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRR--QYKVFELITKEMQLSV 245 (357)
Q Consensus 170 ~~~~~~~~~~~~G~TpLh~Aa--~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g--~~~iv~~Ll~~~~~~~ 245 (357)
.+|..|.||||+|+ ..++.+++++|+++|+++. .+|..|+||||+|+..+ +.+++++|++ .
T Consensus 112 -------~~~~~g~tpLh~a~~~~~~~~~iv~~Ll~~gad~~---~~d~~g~tpL~~a~~~~~~~~~iv~~Ll~-----~ 176 (471)
T PHA03095 112 -------AKDKVGRTPLHVYLSGFNINPKVIRLLLRKGADVN---ALDLYGMTPLAVLLKSRNANVELLRLLID-----A 176 (471)
T ss_pred -------CCCCCCCCHHHHHhhCCcCCHHHHHHHHHcCCCCC---ccCCCCCCHHHHHHHcCCCCHHHHHHHHH-----c
Confidence 66667999999999 5678999999999999998 99999999999999876 6799999988 6
Q ss_pred ccccccccCCCCcHHHHHHHcCCCC----------------CCCCCCChhHHHHHhhhH--HHHHHhc-cCccccccccc
Q 039985 246 PKWASRIDKKGYTLLHHVADMKHYK----------------EGTRPGPVLQFQEELQLF--EHVKEIM-PRHYAMHRDEK 306 (357)
Q Consensus 246 ~~~~~~~d~~G~TpLh~Aa~~g~~~----------------~~~~~~t~L~la~~l~~~--~~v~~ll-~~~~~~~~n~~ 306 (357)
+++++.+|..|+||||+|+...+.. ....+.||||+|...+.. ..++.++ ...+.+.+|.+
T Consensus 177 g~~~~~~d~~g~t~Lh~~~~~~~~~~~i~~~Ll~~g~~~~~~d~~g~tpLh~Aa~~~~~~~~~v~~ll~~g~din~~d~~ 256 (471)
T PHA03095 177 GADVYAVDDRFRSLLHHHLQSFKPRARIVRELIRAGCDPAATDMLGNTPLHSMATGSSCKRSLVLPLLIAGISINARNRY 256 (471)
T ss_pred CCCCcccCCCCCCHHHHHHHHCCCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCchHHHHHHHHHcCCCCCCcCCC
Confidence 7888888999999999999875432 134556999999886653 2344455 34588899999
Q ss_pred CCCCHHHHHhhh
Q 039985 307 NKMTASDLFNLT 318 (357)
Q Consensus 307 g~~Tp~dl~~~~ 318 (357)
|. ||+++|...
T Consensus 257 g~-TpLh~A~~~ 267 (471)
T PHA03095 257 GQ-TPLHYAAVF 267 (471)
T ss_pred CC-CHHHHHHHc
Confidence 99 999999764
|
|
| >PHA02878 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.6e-26 Score=225.87 Aligned_cols=146 Identities=10% Similarity=0.076 Sum_probs=133.7
Q ss_pred CCCC-CCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCc
Q 039985 97 TSPA-NISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHK 175 (357)
Q Consensus 97 ~~~~-g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~ 175 (357)
.+.. |.||||+|+..|+.++++.|++.+++ .+..|..|.| |||+|+..|+.+++++|++.|++++
T Consensus 163 ~~~~~g~tpLh~A~~~~~~~iv~~Ll~~gad-------~n~~d~~g~t-pLh~A~~~~~~~iv~~Ll~~ga~in------ 228 (477)
T PHA02878 163 KDRHKGNTALHYATENKDQRLTELLLSYGAN-------VNIPDKTNNS-PLHHAVKHYNKPIVHILLENGASTD------ 228 (477)
T ss_pred cCCCCCCCHHHHHHhCCCHHHHHHHHHCCCC-------CCCcCCCCCC-HHHHHHHhCCHHHHHHHHHcCCCCC------
Confidence 3344 89999999999999999999999998 7788999999 9999999999999999999999988
Q ss_pred cCCCcCcchHHHHHHHC-CCHHHHHHHHhhCCCcccccccCC-CCChHHHHHHHcCCHHHHHHHHhhhccCCcccccccc
Q 039985 176 KDKNWAIRLTLLFAASN-GITEILKEIIHQHPQAILLDNLNE-KEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRID 253 (357)
Q Consensus 176 ~~~~~~G~TpLh~Aa~~-G~~~iv~~Ll~~~~~~~~~~~~d~-~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d 253 (357)
.+|..|.||||+|+.. ++.+++++|+++|++++ .++. .|+||||+| .++.+++++|+. .++++|.+|
T Consensus 229 -~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~gadvn---~~~~~~g~TpLh~A--~~~~~~v~~Ll~-----~gadin~~d 297 (477)
T PHA02878 229 -ARDKCGNTPLHISVGYCKDYDILKLLLEHGVDVN---AKSYILGLTALHSS--IKSERKLKLLLE-----YGADINSLN 297 (477)
T ss_pred -CCCCCCCCHHHHHHHhcCCHHHHHHHHHcCCCCC---ccCCCCCCCHHHHH--ccCHHHHHHHHH-----CCCCCCCcC
Confidence 5666799999999976 79999999999999998 6665 899999999 578899999988 789999999
Q ss_pred CCCCcHHHHHHHcC
Q 039985 254 KKGYTLLHHVADMK 267 (357)
Q Consensus 254 ~~G~TpLh~Aa~~g 267 (357)
.+|+||||+|+..+
T Consensus 298 ~~g~TpL~~A~~~~ 311 (477)
T PHA02878 298 SYKLTPLSSAVKQY 311 (477)
T ss_pred CCCCCHHHHHHHHc
Confidence 99999999999865
|
|
| >PHA02798 ankyrin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.9e-26 Score=226.90 Aligned_cols=233 Identities=13% Similarity=0.076 Sum_probs=144.7
Q ss_pred cHHHHHHHHHhhhhc--ccCCCCCCCcCcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
Q 039985 28 NANKLLKKLVKEETL--CLGDGEQNPEISLLSPESSSTSLPNPEISSSNPESSTSSLPNPEIFSPDPESSTTSPANISTI 105 (357)
Q Consensus 28 ~~~~iv~~Ll~~~~~--~~d~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L 105 (357)
...++|+.|++.|++ ..|..|.||++........... ..+.. .-+.....+.+..+..|.|||
T Consensus 49 ~~~~iv~~Ll~~Gadvn~~d~~g~TpL~~~~~n~~~~~~--~~~iv-------------~~Ll~~GadiN~~d~~G~TpL 113 (489)
T PHA02798 49 PSTDIVKLFINLGANVNGLDNEYSTPLCTILSNIKDYKH--MLDIV-------------KILIENGADINKKNSDGETPL 113 (489)
T ss_pred CCHHHHHHHHHCCCCCCCCCCCCCChHHHHHHhHHhHHh--HHHHH-------------HHHHHCCCCCCCCCCCcCcHH
Confidence 467888888888888 5677777776532211000000 00000 000011222333344567777
Q ss_pred HHHHhcC---CHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCc---HHHHHHHHHcCCCCCCCCCCccCC-
Q 039985 106 SLGLGKG---NMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSA---AELVELFVKKDCTIKGVPNHKKDK- 178 (357)
Q Consensus 106 h~A~~~g---~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~---~~iv~~Ll~~g~~~~~~~~~~~~~- 178 (357)
|+|+..| +.+++++|++.|++ .+..|..|.| |||+|+..|+ .+++++|+++|++++ .+
T Consensus 114 h~a~~~~~~~~~~iv~~Ll~~Gad-------vn~~d~~g~t-pL~~a~~~~~~~~~~vv~~Ll~~gadin-------~~~ 178 (489)
T PHA02798 114 YCLLSNGYINNLEILLFMIENGAD-------TTLLDKDGFT-MLQVYLQSNHHIDIEIIKLLLEKGVDIN-------THN 178 (489)
T ss_pred HHHHHcCCcChHHHHHHHHHcCCC-------ccccCCCCCc-HHHHHHHcCCcchHHHHHHHHHhCCCcc-------ccc
Confidence 7777765 56777777777766 5666777777 7777777666 677777777776665 22
Q ss_pred CcCcchHHHHHHHC----CCHHHHHHHHhhCCCcccccccCCCCChHHH-------HHHHcCCHHHHHHHHhhhccCCcc
Q 039985 179 NWAIRLTLLFAASN----GITEILKEIIHQHPQAILLDNLNEKEQNILH-------VAVKRRQYKVFELITKEMQLSVPK 247 (357)
Q Consensus 179 ~~~G~TpLh~Aa~~----G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh-------~A~~~g~~~iv~~Ll~~~~~~~~~ 247 (357)
+..|.||||.++.. ++.+++++|+++|+++. ..|..|+|+++ ++...++.+++.+|+. ++
T Consensus 179 ~~~~~t~Lh~~~~~~~~~~~~~ivk~Li~~Ga~i~---~~~~~~~~~~~~~l~~l~~~~~~~~~~i~~~l~~------~~ 249 (489)
T PHA02798 179 NKEKYDTLHCYFKYNIDRIDADILKLFVDNGFIIN---KENKSHKKKFMEYLNSLLYDNKRFKKNILDFIFS------YI 249 (489)
T ss_pred CcCCCcHHHHHHHhccccCCHHHHHHHHHCCCCcc---cCCccccchHHHHHHHHHhhcccchHHHHHHHHh------cC
Confidence 23466777766543 36677777777777666 66666677665 2334455666666643 35
Q ss_pred ccccccCCCCcHHHHHHHcCCCCCCCCCCChhHHHHHhhhHHHHHHhcc-CcccccccccCCCCHHHHHhhhh
Q 039985 248 WASRIDKKGYTLLHHVADMKHYKEGTRPGPVLQFQEELQLFEHVKEIMP-RHYAMHRDEKNKMTASDLFNLTH 319 (357)
Q Consensus 248 ~~~~~d~~G~TpLh~Aa~~g~~~~~~~~~t~L~la~~l~~~~~v~~ll~-~~~~~~~n~~g~~Tp~dl~~~~~ 319 (357)
++|.+|..|+||||+|+..|+ .+.++.++. +++.+.+|..|+ ||+++|.+..
T Consensus 250 dvN~~d~~G~TPL~~A~~~~~-------------------~~~v~~LL~~GAdin~~d~~G~-TpL~~A~~~~ 302 (489)
T PHA02798 250 DINQVDELGFNPLYYSVSHNN-------------------RKIFEYLLQLGGDINIITELGN-TCLFTAFENE 302 (489)
T ss_pred CCCCcCcCCccHHHHHHHcCc-------------------HHHHHHHHHcCCcccccCCCCC-cHHHHHHHcC
Confidence 677777777777777777765 345677764 568899999999 9999997644
|
|
| >KOG0508 consensus Ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.8e-27 Score=218.34 Aligned_cols=180 Identities=14% Similarity=0.118 Sum_probs=145.9
Q ss_pred CCCCHHHHHHhcCCHHHHHHHHhcC-cc-hhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccC
Q 039985 100 ANISTISLGLGKGNMLKAKKLVDFS-AG-ELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKD 177 (357)
Q Consensus 100 ~g~t~Lh~A~~~g~~~~vk~Ll~~~-~~-~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~ 177 (357)
.|.|||-.||++||.++|++|++.. ++ +..-....+...-.|-+ ||..|+..||.+||++|+++|++++.....
T Consensus 41 ~g~tPL~iaaRnGH~~vVeyLle~~~a~~e~~GsV~FDge~Iegap-pLWaAsaAGHl~vVk~L~~~ga~VN~tT~T--- 116 (615)
T KOG0508|consen 41 NGGTPLLIAARNGHADVVEYLLEHCRASPEQGGSVRFDGETIEGAP-PLWAASAAGHLEVVKLLLRRGASVNDTTRT--- 116 (615)
T ss_pred CCCCceeeehhcCcHHHHHHHHHHhcCCccCCceEEeCCcccCCCc-hhhHHhccCcHHHHHHHHHhcCcccccccc---
Confidence 3789999999999999999999943 32 00000112234567888 999999999999999999999999844433
Q ss_pred CCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCC
Q 039985 178 KNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGY 257 (357)
Q Consensus 178 ~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~ 257 (357)
..|||--||..||.++|++|+++|+|+. ..|+.|.|.||+||..||.+|+++|++ .++++|.++..|+
T Consensus 117 ----NStPLraACfDG~leivKyLvE~gad~~---IanrhGhTcLmIa~ykGh~~I~qyLle-----~gADvn~ks~kGN 184 (615)
T KOG0508|consen 117 ----NSTPLRAACFDGHLEIVKYLVEHGADPE---IANRHGHTCLMIACYKGHVDIAQYLLE-----QGADVNAKSYKGN 184 (615)
T ss_pred ----CCccHHHHHhcchhHHHHHHHHcCCCCc---ccccCCCeeEEeeeccCchHHHHHHHH-----hCCCcchhcccCc
Confidence 3699999999999999999999999998 999999999999999999999999998 7899999999999
Q ss_pred cHHHHHHHcCCCCC-------------CCCCCChhHHHHHhhhHHHHHHhc
Q 039985 258 TLLHHVADMKHYKE-------------GTRPGPVLQFQEELQLFEHVKEIM 295 (357)
Q Consensus 258 TpLh~Aa~~g~~~~-------------~~~~~t~L~la~~l~~~~~v~~ll 295 (357)
|+||.|+..|+.++ ...+-|||..|..-+..+.|+.++
T Consensus 185 TALH~caEsG~vdivq~Ll~~ga~i~~d~~GmtPL~~Aa~tG~~~iVe~L~ 235 (615)
T KOG0508|consen 185 TALHDCAESGSVDIVQLLLKHGAKIDVDGHGMTPLLLAAVTGHTDIVERLL 235 (615)
T ss_pred hHHHhhhhcccHHHHHHHHhCCceeeecCCCCchHHHHhhhcchHHHHHHh
Confidence 99999999998651 112225555555555555555554
|
|
| >PHA02716 CPXV016; CPX019; EVM010; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.2e-26 Score=231.04 Aligned_cols=188 Identities=10% Similarity=0.018 Sum_probs=151.0
Q ss_pred CCCCCCHHHHHHh--cCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCc--HHHHHHHHHcCCCCCCCCC
Q 039985 98 SPANISTISLGLG--KGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSA--AELVELFVKKDCTIKGVPN 173 (357)
Q Consensus 98 ~~~g~t~Lh~A~~--~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~--~~iv~~Ll~~g~~~~~~~~ 173 (357)
+..|.||||+|+. +++.+++++|++.|++ .+..|..|.| |||+|+..|+ .++|++|+++|++++
T Consensus 174 d~~G~TpLH~A~~n~~~~~eIVklLLe~GAD-------VN~kD~~G~T-PLH~Aa~~g~~~~eIVklLLe~GADVN---- 241 (764)
T PHA02716 174 KKTGYGILHAYLGNMYVDIDILEWLCNNGVN-------VNLQNNHLIT-PLHTYLITGNVCASVIKKIIELGGDMD---- 241 (764)
T ss_pred CCCCCcHHHHHHHhccCCHHHHHHHHHcCCC-------CCCCCCCCCC-HHHHHHHcCCCCHHHHHHHHHcCCCCC----
Confidence 4569999999875 4689999999999998 7889999999 9999999995 599999999999988
Q ss_pred CccCCCcCcchHHHHH-------------------------------------HHCCCHHHHHHHHhhCCCcccccccCC
Q 039985 174 HKKDKNWAIRLTLLFA-------------------------------------ASNGITEILKEIIHQHPQAILLDNLNE 216 (357)
Q Consensus 174 ~~~~~~~~G~TpLh~A-------------------------------------a~~G~~~iv~~Ll~~~~~~~~~~~~d~ 216 (357)
.+|..|+||||+| |+.|+.+++++|+++|++++ .+|.
T Consensus 242 ---~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~~i~AA~~g~leiVklLLe~GAdIN---~kD~ 315 (764)
T PHA02716 242 ---MKCVNGMSPIMTYIINIDNINPEITNIYIESLDGNKVKNIPMILHSYITLARNIDISVVYSFLQPGVKLH---YKDS 315 (764)
T ss_pred ---CCCCCCCCHHHHHHHhhhccCHHHHHHHHHhccccccccchhhhHHHHHHHHcCCHHHHHHHHhCCCcee---ccCC
Confidence 6666799999975 45688999999999999988 8999
Q ss_pred CCChHHHHHHH--cCCHHHHHHHHhhhccCCccccccccCCCCcHHHHHHHcCCCCCCCCCCChhHHHHHhhhHHHHHHh
Q 039985 217 KEQNILHVAVK--RRQYKVFELITKEMQLSVPKWASRIDKKGYTLLHHVADMKHYKEGTRPGPVLQFQEELQLFEHVKEI 294 (357)
Q Consensus 217 ~G~TpLh~A~~--~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~~~~~t~L~la~~l~~~~~v~~l 294 (357)
.|+||||+|+. +++.+++++|++ .|++++.+|..|+||||+|+............+ ...+..+.++.+
T Consensus 316 ~G~TPLH~Aaa~~~~~~eIVklLLe-----~GADIN~kD~~G~TPLH~A~~~lav~~~ld~~~-----~~~~~~eVVklL 385 (764)
T PHA02716 316 AGRTCLHQYILRHNISTDIIKLLHE-----YGNDLNEPDNIGNTVLHTYLSMLSVVNILDPET-----DNDIRLDVIQCL 385 (764)
T ss_pred CCCCHHHHHHHHhCCCchHHHHHHH-----cCCCCccCCCCCCCHHHHHHHhhhhhccccccc-----cccChHHHHHHH
Confidence 99999999874 468899999987 688999999999999999876321100000000 001244556666
Q ss_pred cc-CcccccccccCCCCHHHH
Q 039985 295 MP-RHYAMHRDEKNKMTASDL 314 (357)
Q Consensus 295 l~-~~~~~~~n~~g~~Tp~dl 314 (357)
+. +.+.+.+|..|+ ||++.
T Consensus 386 L~~GADIn~kn~~G~-TPLh~ 405 (764)
T PHA02716 386 ISLGADITAVNCLGY-TPLTS 405 (764)
T ss_pred HHCCCCCCCcCCCCC-ChHHH
Confidence 63 458889999999 99984
|
|
| >PHA02859 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-25 Score=199.41 Aligned_cols=147 Identities=17% Similarity=0.191 Sum_probs=130.7
Q ss_pred CCCCCCHHHHHHhcC--CHHHHHHHHhcCcchhHHHhhhhhcC-CCCCcHHHHHHHhc---CcHHHHHHHHHcCCCCCCC
Q 039985 98 SPANISTISLGLGKG--NMLKAKKLVDFSAGELDELLLKKDCT-NKGNMIKAKKFVDF---SAAELVELFVKKDCTIKGV 171 (357)
Q Consensus 98 ~~~g~t~Lh~A~~~g--~~~~vk~Ll~~~~~~~~~~l~~~~~~-~~g~t~pLh~A~~~---g~~~iv~~Ll~~g~~~~~~ 171 (357)
+..|.||||+|+..+ +.+++++|++.+++ .+..+ ..|.| |||+|+.. ++.+++++|+++|++++
T Consensus 48 ~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gad-------vn~~~~~~g~T-pLh~a~~~~~~~~~eiv~~Ll~~gadin-- 117 (209)
T PHA02859 48 NDLYETPIFSCLEKDKVNVEILKFLIENGAD-------VNFKTRDNNLS-ALHHYLSFNKNVEPEILKILIDSGSSIT-- 117 (209)
T ss_pred CccCCCHHHHHHHcCCCCHHHHHHHHHCCCC-------CCccCCCCCCC-HHHHHHHhCccccHHHHHHHHHCCCCCC--
Confidence 345899999999855 89999999999998 66676 58999 99998864 47999999999999998
Q ss_pred CCCccCCCcCcchHHHHHHH--CCCHHHHHHHHhhCCCcccccccCCCCChHHHH-HHHcCCHHHHHHHHhhhccCCccc
Q 039985 172 PNHKKDKNWAIRLTLLFAAS--NGITEILKEIIHQHPQAILLDNLNEKEQNILHV-AVKRRQYKVFELITKEMQLSVPKW 248 (357)
Q Consensus 172 ~~~~~~~~~~G~TpLh~Aa~--~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~-A~~~g~~~iv~~Ll~~~~~~~~~~ 248 (357)
.+|..|.||||+|+. .++.+++++|+++|++++ .+|..|.||||. |+..++.+++++|++ .+++
T Consensus 118 -----~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin---~~d~~g~t~Lh~~a~~~~~~~iv~~Ll~-----~Gad 184 (209)
T PHA02859 118 -----EEDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFL---NKDFDNNNILYSYILFHSDKKIFDFLTS-----LGID 184 (209)
T ss_pred -----CcCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcc---cccCCCCcHHHHHHHhcCCHHHHHHHHH-----cCCC
Confidence 666779999999886 578999999999999998 899999999996 567889999999988 6889
Q ss_pred cccccCCCCcHHHHHHHcC
Q 039985 249 ASRIDKKGYTLLHHVADMK 267 (357)
Q Consensus 249 ~~~~d~~G~TpLh~Aa~~g 267 (357)
++.+|..|.||||+|...+
T Consensus 185 i~~~d~~g~tpl~la~~~~ 203 (209)
T PHA02859 185 INETNKSGYNCYDLIKFRN 203 (209)
T ss_pred CCCCCCCCCCHHHHHhhhh
Confidence 9999999999999999776
|
|
| >PHA02798 ankyrin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.6e-25 Score=219.94 Aligned_cols=219 Identities=16% Similarity=0.154 Sum_probs=166.5
Q ss_pred ccchHHHHHHHhhhccccHHHHHHHHHhhhhc--ccCCCCCCCcCcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 039985 11 EGRPAIKKIWMKKQMHKNANKLLKKLVKEETL--CLGDGEQNPEISLLSPESSSTSLPNPEISSSNPESSTSSLPNPEIF 88 (357)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~~~~--~~d~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (357)
+|++++-....-.+......++|++|++.|++ ..|.+|+||++.+...... ...+... -+.
T Consensus 70 ~g~TpL~~~~~n~~~~~~~~~iv~~Ll~~GadiN~~d~~G~TpLh~a~~~~~~----~~~~iv~-------------~Ll 132 (489)
T PHA02798 70 EYSTPLCTILSNIKDYKHMLDIVKILIENGADINKKNSDGETPLYCLLSNGYI----NNLEILL-------------FMI 132 (489)
T ss_pred CCCChHHHHHHhHHhHHhHHHHHHHHHHCCCCCCCCCCCcCcHHHHHHHcCCc----ChHHHHH-------------HHH
Confidence 56666643322111112358999999999999 8889999999855332210 0000000 000
Q ss_pred CCCCCCCCCCCCCCCHHHHHHhcCC---HHHHHHHHhcCcchhHHHhhhhhcC-CCCCcHHHHHHHhcC----cHHHHHH
Q 039985 89 SPDPESSTTSPANISTISLGLGKGN---MLKAKKLVDFSAGELDELLLKKDCT-NKGNMIKAKKFVDFS----AAELVEL 160 (357)
Q Consensus 89 ~~~~~~~~~~~~g~t~Lh~A~~~g~---~~~vk~Ll~~~~~~~~~~l~~~~~~-~~g~t~pLh~A~~~g----~~~iv~~ 160 (357)
....+....+..|.||||+|++.|+ .++++.|++.|++ .+..+ ..|.| |||.++..+ +.+++++
T Consensus 133 ~~Gadvn~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gad-------in~~~~~~~~t-~Lh~~~~~~~~~~~~~ivk~ 204 (489)
T PHA02798 133 ENGADTTLLDKDGFTMLQVYLQSNHHIDIEIIKLLLEKGVD-------INTHNNKEKYD-TLHCYFKYNIDRIDADILKL 204 (489)
T ss_pred HcCCCccccCCCCCcHHHHHHHcCCcchHHHHHHHHHhCCC-------cccccCcCCCc-HHHHHHHhccccCCHHHHHH
Confidence 1122334455679999999999998 9999999999988 55554 56888 999999887 6899999
Q ss_pred HHHcCCCCCCCCCCccCCCcCcchHHH-------HHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHH
Q 039985 161 FVKKDCTIKGVPNHKKDKNWAIRLTLL-------FAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKV 233 (357)
Q Consensus 161 Ll~~g~~~~~~~~~~~~~~~~G~TpLh-------~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~i 233 (357)
|+++|++++ ..+..|.|+++ ++...++.+++++|+. +++++ .+|..|+||||+|+.+|+.++
T Consensus 205 Li~~Ga~i~-------~~~~~~~~~~~~~l~~l~~~~~~~~~~i~~~l~~-~~dvN---~~d~~G~TPL~~A~~~~~~~~ 273 (489)
T PHA02798 205 FVDNGFIIN-------KENKSHKKKFMEYLNSLLYDNKRFKKNILDFIFS-YIDIN---QVDELGFNPLYYSVSHNNRKI 273 (489)
T ss_pred HHHCCCCcc-------cCCccccchHHHHHHHHHhhcccchHHHHHHHHh-cCCCC---CcCcCCccHHHHHHHcCcHHH
Confidence 999999987 44445788876 3556788899988776 68887 999999999999999999999
Q ss_pred HHHHHhhhccCCccccccccCCCCcHHHHHHHcCCCC
Q 039985 234 FELITKEMQLSVPKWASRIDKKGYTLLHHVADMKHYK 270 (357)
Q Consensus 234 v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~ 270 (357)
+++|++ .|++++.+|..|+||||+|+..|+.+
T Consensus 274 v~~LL~-----~GAdin~~d~~G~TpL~~A~~~~~~~ 305 (489)
T PHA02798 274 FEYLLQ-----LGGDINIITELGNTCLFTAFENESKF 305 (489)
T ss_pred HHHHHH-----cCCcccccCCCCCcHHHHHHHcCcHH
Confidence 999998 78999999999999999999999754
|
|
| >PHA02989 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1e-24 Score=217.78 Aligned_cols=218 Identities=12% Similarity=0.118 Sum_probs=138.4
Q ss_pred ccchHHHHHHHhhhccccHHHHHHHHHhhhhc-ccCCCCCCCcCcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 039985 11 EGRPAIKKIWMKKQMHKNANKLLKKLVKEETL-CLGDGEQNPEISLLSPESSSTSLPNPEISSSNPESSTSSLPNPEIFS 89 (357)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~~~~-~~d~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (357)
+|++++--..+. +....++|++||++|++ .....+.||++.......... ....+.. .-+..
T Consensus 34 ~g~t~l~~~~~~---~~~~~~iv~~Ll~~GAdvn~~~~~~tpL~~a~~~~~~~~-~~~~~iv-------------~~Ll~ 96 (494)
T PHA02989 34 RGNSILLLYLKR---KDVKIKIVKLLIDNGADVNYKGYIETPLCAVLRNREITS-NKIKKIV-------------KLLLK 96 (494)
T ss_pred CCCCHHHHHHhc---CCCChHHHHHHHHcCCCccCCCCCCCcHHHHHhccCcch-hhHHHHH-------------HHHHH
Confidence 355655332222 23357999999999999 444467899874321111000 0000000 00111
Q ss_pred CCCCCCCCCCCCCCHHHHHHhc---CCHHHHHHHHhcCcchhHHHhhh-hhcCCCCCcHHHHHHHhc--CcHHHHHHHHH
Q 039985 90 PDPESSTTSPANISTISLGLGK---GNMLKAKKLVDFSAGELDELLLK-KDCTNKGNMIKAKKFVDF--SAAELVELFVK 163 (357)
Q Consensus 90 ~~~~~~~~~~~g~t~Lh~A~~~---g~~~~vk~Ll~~~~~~~~~~l~~-~~~~~~g~t~pLh~A~~~--g~~~iv~~Ll~ 163 (357)
...+.+..+..|.||||.|+.. |+.+++++|++.|++ . +..|..|.| |||+|+.. ++.++|++|++
T Consensus 97 ~Gadin~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gad-------in~~~d~~g~t-pLh~a~~~~~~~~~iv~~Ll~ 168 (494)
T PHA02989 97 FGADINLKTFNGVSPIVCFIYNSNINNCDMLRFLLSKGIN-------VNDVKNSRGYN-LLHMYLESFSVKKDVIKILLS 168 (494)
T ss_pred CCCCCCCCCCCCCcHHHHHHHhcccCcHHHHHHHHHCCCC-------cccccCCCCCC-HHHHHHHhccCCHHHHHHHHH
Confidence 1233344556799999988765 689999999999998 6 678899999 99998764 68999999999
Q ss_pred cCCCCCCCCCCccCCCcCcchHHHHHHHCC----CHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcC------CHHH
Q 039985 164 KDCTIKGVPNHKKDKNWAIRLTLLFAASNG----ITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRR------QYKV 233 (357)
Q Consensus 164 ~g~~~~~~~~~~~~~~~~G~TpLh~Aa~~G----~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g------~~~i 233 (357)
+|++++.. .+..|.||||+|++.+ +.+++++|+++|++++ .+|..|.||||.++..+ ..++
T Consensus 169 ~Gadi~~~------~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn---~~~~~~~t~l~~~~~~~~~~~~~~~~i 239 (494)
T PHA02989 169 FGVNLFEK------TSLYGLTPMNIYLRNDIDVISIKVIKYLIKKGVNIE---TNNNGSESVLESFLDNNKILSKKEFKV 239 (494)
T ss_pred cCCCcccc------ccccCCChHHHHHhcccccccHHHHHHHHhCCCCcc---ccCCccccHHHHHHHhchhhcccchHH
Confidence 99998721 3456999999998764 8999999999999876 55544445554443322 2334
Q ss_pred HHHHHhhhccCCccccccccCCCCcHHHHHHHcCC
Q 039985 234 FELITKEMQLSVPKWASRIDKKGYTLLHHVADMKH 268 (357)
Q Consensus 234 v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~ 268 (357)
+++|+. ++++|.+|..|+||||+|+..|+
T Consensus 240 l~~l~~------~advn~~d~~G~TpL~~Aa~~~~ 268 (494)
T PHA02989 240 LNFILK------YIKINKKDKKGFNPLLISAKVDN 268 (494)
T ss_pred HHHHHh------CCCCCCCCCCCCCHHHHHHHhcC
Confidence 444322 24444455555555555554444
|
|
| >PHA02795 ankyrin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=9.7e-25 Score=209.33 Aligned_cols=149 Identities=12% Similarity=-0.016 Sum_probs=130.9
Q ss_pred CCCHHHHHHh--cCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCC
Q 039985 101 NISTISLGLG--KGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDK 178 (357)
Q Consensus 101 g~t~Lh~A~~--~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~ 178 (357)
+.|+||.|+. .|+.++|++|++.|++ .+. .++.| |||.|+..|+.++|++|+++|++........ ..
T Consensus 116 ~~~~L~~~~~n~~n~~eiV~~LI~~GAD-------In~--~~~~t-~lh~A~~~~~~eIVk~Lls~Ga~~~n~~~~~-l~ 184 (437)
T PHA02795 116 VQDLLLYYLSNAYVEIDIVDFMVDHGAV-------IYK--IECLN-AYFRGICKKESSVVEFILNCGIPDENDVKLD-LY 184 (437)
T ss_pred ccHHHHHHHHhcCCCHHHHHHHHHCCCC-------CCC--CCCCC-HHHHHHHcCcHHHHHHHHhcCCcccccccch-hh
Confidence 6699999999 9999999999999998 433 35578 9999999999999999999998543221110 11
Q ss_pred CcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCc
Q 039985 179 NWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYT 258 (357)
Q Consensus 179 ~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~T 258 (357)
+..|.||+|.|+..++.+++++|+++|++++ .+|..|+||||+|+.+|+.+++++|++ .|++++.+|..|.|
T Consensus 185 ~~~~~t~l~~a~~~~~~eIve~LIs~GADIN---~kD~~G~TpLh~Aa~~g~~eiVelLL~-----~GAdIN~~d~~G~T 256 (437)
T PHA02795 185 KIIQYTRGFLVDEPTVLEIYKLCIPYIEDIN---QLDAGGRTLLYRAIYAGYIDLVSWLLE-----NGANVNAVMSNGYT 256 (437)
T ss_pred hhhccchhHHHHhcCHHHHHHHHHhCcCCcC---cCCCCCCCHHHHHHHcCCHHHHHHHHH-----CCCCCCCcCCCCCC
Confidence 2347899999999999999999999999998 999999999999999999999999998 78999999999999
Q ss_pred HHHHHHHcCC
Q 039985 259 LLHHVADMKH 268 (357)
Q Consensus 259 pLh~Aa~~g~ 268 (357)
|||+|+..|+
T Consensus 257 pLh~Aa~~g~ 266 (437)
T PHA02795 257 CLDVAVDRGS 266 (437)
T ss_pred HHHHHHHcCC
Confidence 9999999995
|
|
| >PLN03192 Voltage-dependent potassium channel; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.2e-24 Score=226.96 Aligned_cols=178 Identities=16% Similarity=0.159 Sum_probs=155.3
Q ss_pred CCCCCCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCc
Q 039985 96 TTSPANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHK 175 (357)
Q Consensus 96 ~~~~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~ 175 (357)
..++.+.++||.||..|+.++++.|++.+.+ .+..|..|.| |||+|+..|+.++|++|+++|++++
T Consensus 520 ~~~~~~~~~L~~Aa~~g~~~~l~~Ll~~G~d-------~n~~d~~G~T-pLh~Aa~~g~~~~v~~Ll~~gadin------ 585 (823)
T PLN03192 520 HDDPNMASNLLTVASTGNAALLEELLKAKLD-------PDIGDSKGRT-PLHIAASKGYEDCVLVLLKHACNVH------ 585 (823)
T ss_pred cCCccchhHHHHHHHcCCHHHHHHHHHCCCC-------CCCCCCCCCC-HHHHHHHcChHHHHHHHHhcCCCCC------
Confidence 3444577999999999999999999999998 7889999999 9999999999999999999999987
Q ss_pred cCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCC
Q 039985 176 KDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKK 255 (357)
Q Consensus 176 ~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~ 255 (357)
.+|..|.||||+|+..||.+++++|++.++... ...|.++||.|+.+|+.+++++|++ .++++|.+|.+
T Consensus 586 -~~d~~G~TpL~~A~~~g~~~iv~~L~~~~~~~~-----~~~~~~~L~~Aa~~g~~~~v~~Ll~-----~Gadin~~d~~ 654 (823)
T PLN03192 586 -IRDANGNTALWNAISAKHHKIFRILYHFASISD-----PHAAGDLLCTAAKRNDLTAMKELLK-----QGLNVDSEDHQ 654 (823)
T ss_pred -CcCCCCCCHHHHHHHhCCHHHHHHHHhcCcccC-----cccCchHHHHHHHhCCHHHHHHHHH-----CCCCCCCCCCC
Confidence 566679999999999999999999998776554 4568899999999999999999998 78899999999
Q ss_pred CCcHHHHHHHcCCCCCCCCCCChhHHHHHhhhHHHHHHhc-cCcccccccccCCCCHHHHHhh
Q 039985 256 GYTLLHHVADMKHYKEGTRPGPVLQFQEELQLFEHVKEIM-PRHYAMHRDEKNKMTASDLFNL 317 (357)
Q Consensus 256 G~TpLh~Aa~~g~~~~~~~~~t~L~la~~l~~~~~v~~ll-~~~~~~~~n~~g~~Tp~dl~~~ 317 (357)
|+||||+|+..|+. +.++.|+ .+.+.+..|..|.+||.+++..
T Consensus 655 G~TpLh~A~~~g~~-------------------~iv~~Ll~~GAdv~~~~~~g~~t~~~l~~~ 698 (823)
T PLN03192 655 GATALQVAMAEDHV-------------------DMVRLLIMNGADVDKANTDDDFSPTELREL 698 (823)
T ss_pred CCCHHHHHHHCCcH-------------------HHHHHHHHcCCCCCCCCCCCCCCHHHHHHH
Confidence 99999999999973 3455555 3457788888883499998854
|
|
| >PHA02917 ankyrin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.9e-24 Score=218.33 Aligned_cols=149 Identities=14% Similarity=0.074 Sum_probs=121.2
Q ss_pred CCCCCCCCHHHHHHhcCCHH----HHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCC
Q 039985 96 TTSPANISTISLGLGKGNML----KAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGV 171 (357)
Q Consensus 96 ~~~~~g~t~Lh~A~~~g~~~----~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~ 171 (357)
..+..|.||||+|+..|+.+ +++.|++.+.. .+.. +..+ ++|+|+..|+.++|++|+++|++++
T Consensus 63 ~~~~~g~TpL~~Aa~~g~~~v~~~~~~~Ll~~~~~-------~n~~--~~~~-~~~~a~~~~~~e~vk~Ll~~Gadin-- 130 (661)
T PHA02917 63 HKNWRQLTPLEEYTNSRHVKVNKDIAMALLEATGY-------SNIN--DFNI-FSYMKSKNVDVDLIKVLVEHGFDLS-- 130 (661)
T ss_pred ccCCCCCCHHHHHHHcCChhHHHHHHHHHHhccCC-------CCCC--Ccch-HHHHHhhcCCHHHHHHHHHcCCCCC--
Confidence 34456999999999999965 45667665432 1111 1235 8889999999999999999999998
Q ss_pred CCCccCCCcCcchHHHHH--HHCCCHHHHHHHHhhCCCcccccccCC---CC-----------ChHHHHHHH--------
Q 039985 172 PNHKKDKNWAIRLTLLFA--ASNGITEILKEIIHQHPQAILLDNLNE---KE-----------QNILHVAVK-------- 227 (357)
Q Consensus 172 ~~~~~~~~~~G~TpLh~A--a~~G~~~iv~~Ll~~~~~~~~~~~~d~---~G-----------~TpLh~A~~-------- 227 (357)
.+|..|+||||+| +..|+.++|++|+++|++++ ..|. .| .||||+|+.
T Consensus 131 -----~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn---~~d~~~~~g~~~~~~~~~~~~t~L~~a~~~~~~~~~~ 202 (661)
T PHA02917 131 -----VKCENHRSVIENYVMTDDPVPEIIDLFIENGCSVL---YEDEDDEYGYAYDDYQPRNCGTVLHLYIISHLYSESD 202 (661)
T ss_pred -----ccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCcc---ccccccccccccccccccccccHHHHHHhhccccccc
Confidence 6667799999964 45799999999999999987 4443 34 599999986
Q ss_pred ---cCCHHHHHHHHhhhccCCccccccccCCCCcHHHHHHHcCCC
Q 039985 228 ---RRQYKVFELITKEMQLSVPKWASRIDKKGYTLLHHVADMKHY 269 (357)
Q Consensus 228 ---~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~ 269 (357)
+++.++|++|++ .|+++|.+|.+|+||||+|+..|+.
T Consensus 203 ~~~~~~~eiv~~Li~-----~Gadvn~~d~~G~TpLh~A~~~g~~ 242 (661)
T PHA02917 203 TRAYVRPEVVKCLIN-----HGIKPSSIDKNYCTALQYYIKSSHI 242 (661)
T ss_pred ccccCcHHHHHHHHH-----CCCCcccCCCCCCcHHHHHHHcCCC
Confidence 568999999988 7899999999999999999999984
|
|
| >KOG0508 consensus Ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.4e-25 Score=207.56 Aligned_cols=147 Identities=18% Similarity=0.149 Sum_probs=135.5
Q ss_pred CCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCC
Q 039985 100 ANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKN 179 (357)
Q Consensus 100 ~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~ 179 (357)
.|.+||-.|+..||.++||.|++.++. ++.......| ||--||..|+.++|++|+++|++++ ..|
T Consensus 83 egappLWaAsaAGHl~vVk~L~~~ga~-------VN~tT~TNSt-PLraACfDG~leivKyLvE~gad~~-------Ian 147 (615)
T KOG0508|consen 83 EGAPPLWAASAAGHLEVVKLLLRRGAS-------VNDTTRTNST-PLRAACFDGHLEIVKYLVEHGADPE-------IAN 147 (615)
T ss_pred CCCchhhHHhccCcHHHHHHHHHhcCc-------cccccccCCc-cHHHHHhcchhHHHHHHHHcCCCCc-------ccc
Confidence 488999999999999999999999988 7777788888 9999999999999999999999988 667
Q ss_pred cCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcH
Q 039985 180 WAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTL 259 (357)
Q Consensus 180 ~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~Tp 259 (357)
..|.|.||+||.+||.+|+++|++.|+|++ .++..|+|+||.+++.|+.+++++|++ +++.+ .+|..|.||
T Consensus 148 rhGhTcLmIa~ykGh~~I~qyLle~gADvn---~ks~kGNTALH~caEsG~vdivq~Ll~-----~ga~i-~~d~~GmtP 218 (615)
T KOG0508|consen 148 RHGHTCLMIACYKGHVDIAQYLLEQGADVN---AKSYKGNTALHDCAESGSVDIVQLLLK-----HGAKI-DVDGHGMTP 218 (615)
T ss_pred cCCCeeEEeeeccCchHHHHHHHHhCCCcc---hhcccCchHHHhhhhcccHHHHHHHHh-----CCcee-eecCCCCch
Confidence 779999999999999999999999999999 999999999999999999999999998 44443 466779999
Q ss_pred HHHHHHcCCCC
Q 039985 260 LHHVADMKHYK 270 (357)
Q Consensus 260 Lh~Aa~~g~~~ 270 (357)
|..|+..|+.+
T Consensus 219 L~~Aa~tG~~~ 229 (615)
T KOG0508|consen 219 LLLAAVTGHTD 229 (615)
T ss_pred HHHHhhhcchH
Confidence 99999999865
|
|
| >KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.7e-24 Score=224.74 Aligned_cols=247 Identities=13% Similarity=0.129 Sum_probs=167.2
Q ss_pred cHHHHHHHHHhhhhc--ccCCCCCCCcCcCCCCCCCCCC---CC---CCCCCCCCCCCCCCC--CC----C--CCCCCCC
Q 039985 28 NANKLLKKLVKEETL--CLGDGEQNPEISLLSPESSSTS---LP---NPEISSSNPESSTSS--LP----N--PEIFSPD 91 (357)
Q Consensus 28 ~~~~iv~~Ll~~~~~--~~d~~g~~p~~~~~~~~~~~~~---~~---~~~~~~~~~~~~~~~--~~----~--~~~~~~~ 91 (357)
...++|++|+.+|++ ..+..|.||++..........- +. .+.........+.-. .. . +......
T Consensus 385 g~~~~v~Lll~~ga~~~~~gk~gvTplh~aa~~~~~~~v~l~l~~gA~~~~~~~lG~T~lhvaa~~g~~~~~~~~l~~~g 464 (1143)
T KOG4177|consen 385 GRVSVVELLLEAGADPNSAGKNGVTPLHVAAHYGNPRVVKLLLKRGASPNAKAKLGYTPLHVAAKKGRYLQIARLLLQYG 464 (1143)
T ss_pred CchhHHHhhhhccCCcccCCCCCcceeeehhhccCcceEEEEeccCCChhhHhhcCCChhhhhhhcccHhhhhhhHhhcC
Confidence 456789999999988 6677788888854433331111 00 000000000000000 00 0 1111223
Q ss_pred CCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCC
Q 039985 92 PESSTTSPANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGV 171 (357)
Q Consensus 92 ~~~~~~~~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~ 171 (357)
.+.+...+.|.||||.|+..|+.++++.|++.++. .+...+.|-+ +||.|...+...+++.++++|+++.
T Consensus 465 ~~~n~~s~~G~T~Lhlaaq~Gh~~~~~llle~~~~-------~~~~~~~~l~-~lhla~~~~~v~~~~~l~~~ga~v~-- 534 (1143)
T KOG4177|consen 465 ADPNAVSKQGFTPLHLAAQEGHTEVVQLLLEGGAN-------DNLDAKKGLT-PLHLAADEDTVKVAKILLEHGANVD-- 534 (1143)
T ss_pred CCcchhccccCcchhhhhccCCchHHHHhhhcCCc-------cCccchhccc-hhhhhhhhhhHHHHHHHhhcCCcee--
Confidence 33444556678888888888888888888777755 4445667777 8888888888888888888887776
Q ss_pred CCCccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCcccccc
Q 039985 172 PNHKKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASR 251 (357)
Q Consensus 172 ~~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~ 251 (357)
.++.+|.||||.||.+|++++|++||++|++++ .+|+.|+||||.||..|+.+|+++|++ .|+.+|.
T Consensus 535 -----~~~~r~~TpLh~A~~~g~v~~VkfLLe~gAdv~---ak~~~G~TPLH~Aa~~G~~~i~~LLlk-----~GA~vna 601 (1143)
T KOG4177|consen 535 -----LRTGRGYTPLHVAVHYGNVDLVKFLLEHGADVN---AKDKLGYTPLHQAAQQGHNDIAELLLK-----HGASVNA 601 (1143)
T ss_pred -----hhcccccchHHHHHhcCCchHHHHhhhCCcccc---ccCCCCCChhhHHHHcChHHHHHHHHH-----cCCCCCc
Confidence 666668899999999999999999999998888 888889999999999898889888888 7888888
Q ss_pred ccCCCCcHHHHHHHcCCCCCCCCCCChhHHHHHhhhHHHHHHhcc-Cc-----ccccccccCCCCHHHHHhh
Q 039985 252 IDKKGYTLLHHVADMKHYKEGTRPGPVLQFQEELQLFEHVKEIMP-RH-----YAMHRDEKNKMTASDLFNL 317 (357)
Q Consensus 252 ~d~~G~TpLh~Aa~~g~~~~~~~~~t~L~la~~l~~~~~v~~ll~-~~-----~~~~~n~~g~~Tp~dl~~~ 317 (357)
.|.+|.||||+|++.|++. .++.++. .. +....+..|. ||.++..+
T Consensus 602 ~d~~g~TpL~iA~~lg~~~-------------------~~k~l~~~~~~~~~~~~~~e~~~g~-~p~~v~e~ 653 (1143)
T KOG4177|consen 602 ADLDGFTPLHIAVRLGYLS-------------------VVKLLKVVTATPAATDPVKENRKGA-VPEDVAEE 653 (1143)
T ss_pred ccccCcchhHHHHHhcccc-------------------hhhHHHhccCccccccchhhhhccc-ChhhHHHH
Confidence 8888999999998888754 2222221 11 2456677787 88887753
|
|
| >KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.9e-24 Score=211.59 Aligned_cols=220 Identities=16% Similarity=0.157 Sum_probs=184.9
Q ss_pred CCCCCCCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCC
Q 039985 95 STTSPANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNH 174 (357)
Q Consensus 95 ~~~~~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~ 174 (357)
+..+..|+|+||.||.+|+..++++|++..+- ...+|.+|.+ |||+|++.|+.++|++|+.++..++
T Consensus 43 n~qd~~gfTalhha~Lng~~~is~llle~ea~-------ldl~d~kg~~-plhlaaw~g~~e~vkmll~q~d~~n----- 109 (854)
T KOG0507|consen 43 NLQDYSGFTLLHHAVLNGQNQISKLLLDYEAL-------LDLCDTKGIL-PLHLAAWNGNLEIVKMLLLQTDILN----- 109 (854)
T ss_pred cccCccchhHHHHHHhcCchHHHHHHhcchhh-------hhhhhccCcc-eEEehhhcCcchHHHHHHhcccCCC-----
Confidence 33445799999999999999999999999886 5567899999 9999999999999999999996666
Q ss_pred ccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCC----ccccc
Q 039985 175 KKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSV----PKWAS 250 (357)
Q Consensus 175 ~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~----~~~~~ 250 (357)
.++..|.||||.||+.||.++|.+|++++++.. .+|..+.|+|-+|++.|+.++|++|++. .+.. ...-.
T Consensus 110 --a~~~e~~tplhlaaqhgh~dvv~~Ll~~~adp~---i~nns~~t~ldlA~qfgr~~Vvq~ll~~-~~~~~~~~~~~~~ 183 (854)
T KOG0507|consen 110 --AVNIENETPLHLAAQHGHLEVVFYLLKKNADPF---IRNNSKETVLDLASRFGRAEVVQMLLQK-KFPVQSSLRVGDI 183 (854)
T ss_pred --cccccCcCccchhhhhcchHHHHHHHhcCCCcc---ccCcccccHHHHHHHhhhhHHHHHHhhh-ccchhhcccCCCC
Confidence 666779999999999999999999999999999 9999999999999999999999999985 2111 11134
Q ss_pred cccCCCCcHHHHHHHcCCCCC-------------CCCCCChhHHHHHhhhHHHHHHhccCc-ccccccccCCCCHHHHHh
Q 039985 251 RIDKKGYTLLHHVADMKHYKE-------------GTRPGPVLQFQEELQLFEHVKEIMPRH-YAMHRDEKNKMTASDLFN 316 (357)
Q Consensus 251 ~~d~~G~TpLh~Aa~~g~~~~-------------~~~~~t~L~la~~l~~~~~v~~ll~~~-~~~~~n~~g~~Tp~dl~~ 316 (357)
.++-.+-+|||+|+++||.+. ....||+||.|...+..++|+.++... ....+|..|+ |++|+..
T Consensus 184 ~~~~~~~~plHlaakngh~~~~~~ll~ag~din~~t~~gtalheaalcgk~evvr~ll~~gin~h~~n~~~q-taldil~ 262 (854)
T KOG0507|consen 184 KRPFPAIYPLHLAAKNGHVECMQALLEAGFDINYTTEDGTALHEAALCGKAEVVRFLLEIGINTHIKNQHGQ-TALDIII 262 (854)
T ss_pred CCCCCCcCCcchhhhcchHHHHHHHHhcCCCcccccccchhhhhHhhcCcchhhhHHHhhccccccccccch-HHHHHHH
Confidence 566789999999999999762 356789999999999999998888543 7789999999 9999988
Q ss_pred hhhHHHHHHHHHHHHHhh
Q 039985 317 LTHEDQLRKAQEWIKETS 334 (357)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~ 334 (357)
+-....+.+....+++.+
T Consensus 263 d~~~~~~~ei~ga~~~~~ 280 (854)
T KOG0507|consen 263 DLQENRRYEIAGAVKNFE 280 (854)
T ss_pred hcchhhhhhhhhhhhccc
Confidence 766655555554444443
|
|
| >KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.91 E-value=7.8e-25 Score=227.23 Aligned_cols=228 Identities=14% Similarity=0.151 Sum_probs=165.2
Q ss_pred cccHHHHHHHHHhhhhc--ccCCCCCCCcCcCCCCC-CCCCC---CCCCCCCCCCCCCCCCCCCC------CCC---CCC
Q 039985 26 HKNANKLLKKLVKEETL--CLGDGEQNPEISLLSPE-SSSTS---LPNPEISSSNPESSTSSLPN------PEI---FSP 90 (357)
Q Consensus 26 ~~~~~~iv~~Ll~~~~~--~~d~~g~~p~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~------~~~---~~~ 90 (357)
+....++|+.+++++++ ..|..|.||++-.+... +.... ................++.. .+. ..+
T Consensus 416 ~~~~~~~v~l~l~~gA~~~~~~~lG~T~lhvaa~~g~~~~~~~~l~~~g~~~n~~s~~G~T~Lhlaaq~Gh~~~~~llle 495 (1143)
T KOG4177|consen 416 HYGNPRVVKLLLKRGASPNAKAKLGYTPLHVAAKKGRYLQIARLLLQYGADPNAVSKQGFTPLHLAAQEGHTEVVQLLLE 495 (1143)
T ss_pred hccCcceEEEEeccCCChhhHhhcCCChhhhhhhcccHhhhhhhHhhcCCCcchhccccCcchhhhhccCCchHHHHhhh
Confidence 34555677777777777 66667777777665554 21110 00000000011111111111 000 000
Q ss_pred -CCCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCC
Q 039985 91 -DPESSTTSPANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIK 169 (357)
Q Consensus 91 -~~~~~~~~~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~ 169 (357)
..........|.++||.|...+....++.+++.+.+ .+..+.+|+| |||.|+..|+.++|++||++|++++
T Consensus 496 ~~~~~~~~~~~~l~~lhla~~~~~v~~~~~l~~~ga~-------v~~~~~r~~T-pLh~A~~~g~v~~VkfLLe~gAdv~ 567 (1143)
T KOG4177|consen 496 GGANDNLDAKKGLTPLHLAADEDTVKVAKILLEHGAN-------VDLRTGRGYT-PLHVAVHYGNVDLVKFLLEHGADVN 567 (1143)
T ss_pred cCCccCccchhccchhhhhhhhhhHHHHHHHhhcCCc-------eehhcccccc-hHHHHHhcCCchHHHHhhhCCcccc
Confidence 112233445689999999999999999999999999 7889999999 9999999999999999999999998
Q ss_pred CCCCCccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCcccc
Q 039985 170 GVPNHKKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWA 249 (357)
Q Consensus 170 ~~~~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~ 249 (357)
.++..|+||||.||..|+.+|+.+|+++|++++ ..|.+|.||||+|++.|+++++++|+.....+...+.
T Consensus 568 -------ak~~~G~TPLH~Aa~~G~~~i~~LLlk~GA~vn---a~d~~g~TpL~iA~~lg~~~~~k~l~~~~~~~~~~~~ 637 (1143)
T KOG4177|consen 568 -------AKDKLGYTPLHQAAQQGHNDIAELLLKHGASVN---AADLDGFTPLHIAVRLGYLSVVKLLKVVTATPAATDP 637 (1143)
T ss_pred -------ccCCCCCChhhHHHHcChHHHHHHHHHcCCCCC---cccccCcchhHHHHHhcccchhhHHHhccCccccccc
Confidence 666779999999999999999999999999999 9999999999999999999999999773211111125
Q ss_pred ccccCCCCcHHHHHHHcCCCCC
Q 039985 250 SRIDKKGYTLLHHVADMKHYKE 271 (357)
Q Consensus 250 ~~~d~~G~TpLh~Aa~~g~~~~ 271 (357)
...+..|.||.-.+-..-..+.
T Consensus 638 ~~e~~~g~~p~~v~e~~~~~~~ 659 (1143)
T KOG4177|consen 638 VKENRKGAVPEDVAEELDTDRQ 659 (1143)
T ss_pred hhhhhcccChhhHHHHhhhhhh
Confidence 6667788888888877766543
|
|
| >PHA02917 ankyrin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=6.3e-23 Score=209.48 Aligned_cols=140 Identities=11% Similarity=0.077 Sum_probs=116.9
Q ss_pred CCCHHHHHHhc---CCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcH----HHHHHHHHcCCCCCCCCC
Q 039985 101 NISTISLGLGK---GNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAA----ELVELFVKKDCTIKGVPN 173 (357)
Q Consensus 101 g~t~Lh~A~~~---g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~----~iv~~Ll~~g~~~~~~~~ 173 (357)
|.||||+|+.. |+.++|++|++.|++ .+..+..|.| |||+|+..|+. +++++|++.+...+ +.
T Consensus 32 g~t~Lh~a~~~~~~~~~~~v~~Ll~~ga~-------v~~~~~~g~T-pL~~Aa~~g~~~v~~~~~~~Ll~~~~~~n-~~- 101 (661)
T PHA02917 32 KNNALHAYLFNEHCNNVEVVKLLLDSGTN-------PLHKNWRQLT-PLEEYTNSRHVKVNKDIAMALLEATGYSN-IN- 101 (661)
T ss_pred CCcHHHHHHHhhhcCcHHHHHHHHHCCCC-------ccccCCCCCC-HHHHHHHcCChhHHHHHHHHHHhccCCCC-CC-
Confidence 67999997555 889999999999998 6788999999 99999999985 45678888754322 11
Q ss_pred CccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHH--HcCCHHHHHHHHhhhccCCcccccc
Q 039985 174 HKKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAV--KRRQYKVFELITKEMQLSVPKWASR 251 (357)
Q Consensus 174 ~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~--~~g~~~iv~~Ll~~~~~~~~~~~~~ 251 (357)
+ ..+++|+|+.+|+.++|++|+++|++++ .+|..|+||||+|+ .+|+.+++++|++ .|+++|.
T Consensus 102 ---~----~~~~~~~a~~~~~~e~vk~Ll~~Gadin---~~d~~g~T~L~~~~a~~~~~~eivklLi~-----~Ga~vn~ 166 (661)
T PHA02917 102 ---D----FNIFSYMKSKNVDVDLIKVLVEHGFDLS---VKCENHRSVIENYVMTDDPVPEIIDLFIE-----NGCSVLY 166 (661)
T ss_pred ---C----cchHHHHHhhcCCHHHHHHHHHcCCCCC---ccCCCCccHHHHHHHccCCCHHHHHHHHH-----cCCCccc
Confidence 1 3478889999999999999999999999 99999999999654 5789999999998 6788876
Q ss_pred ccC---CC-----------CcHHHHHHH
Q 039985 252 IDK---KG-----------YTLLHHVAD 265 (357)
Q Consensus 252 ~d~---~G-----------~TpLh~Aa~ 265 (357)
+|. .| .||||+|+.
T Consensus 167 ~d~~~~~g~~~~~~~~~~~~t~L~~a~~ 194 (661)
T PHA02917 167 EDEDDEYGYAYDDYQPRNCGTVLHLYII 194 (661)
T ss_pred cccccccccccccccccccccHHHHHHh
Confidence 654 34 599999986
|
|
| >KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.5e-23 Score=178.48 Aligned_cols=150 Identities=15% Similarity=0.137 Sum_probs=134.7
Q ss_pred CCCCCCCCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCC
Q 039985 94 SSTTSPANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPN 173 (357)
Q Consensus 94 ~~~~~~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~ 173 (357)
.+..+.-+.+|+++++...+.+.+..+.+.. .+.+|+.|.| ||.||+..|++++|++||+.|++...+..
T Consensus 122 gnevs~~p~s~~slsVhql~L~~~~~~~~n~---------VN~~De~GfT-pLiWAaa~G~i~vV~fLL~~GAdp~~lgk 191 (296)
T KOG0502|consen 122 GNEVSLMPWSPLSLSVHQLHLDVVDLLVNNK---------VNACDEFGFT-PLIWAAAKGHIPVVQFLLNSGADPDALGK 191 (296)
T ss_pred CCccccccCChhhHHHHHHHHHHHHHHhhcc---------ccCccccCch-HhHHHHhcCchHHHHHHHHcCCChhhhhh
Confidence 3344455889999999999888877766542 5679999999 99999999999999999999999884444
Q ss_pred CccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCcccccccc
Q 039985 174 HKKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRID 253 (357)
Q Consensus 174 ~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d 253 (357)
...|+|++|++.|.++||++||.++++++ ..|-+|-|||-+|++.+|.+||+.|+. .|++++..|
T Consensus 192 -------~resALsLAt~ggytdiV~lLL~r~vdVN---vyDwNGgTpLlyAvrgnhvkcve~Ll~-----sGAd~t~e~ 256 (296)
T KOG0502|consen 192 -------YRESALSLATRGGYTDIVELLLTREVDVN---VYDWNGGTPLLYAVRGNHVKCVESLLN-----SGADVTQED 256 (296)
T ss_pred -------hhhhhHhHHhcCChHHHHHHHHhcCCCcc---eeccCCCceeeeeecCChHHHHHHHHh-----cCCCccccc
Confidence 35799999999999999999999999999 999999999999999999999999988 789999999
Q ss_pred CCCCcHHHHHHHcCC
Q 039985 254 KKGYTLLHHVADMKH 268 (357)
Q Consensus 254 ~~G~TpLh~Aa~~g~ 268 (357)
..|++++.+|+..|.
T Consensus 257 dsGy~~mdlAValGy 271 (296)
T KOG0502|consen 257 DSGYWIMDLAVALGY 271 (296)
T ss_pred ccCCcHHHHHHHhhh
Confidence 999999999999995
|
|
| >PLN03192 Voltage-dependent potassium channel; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.1e-22 Score=212.01 Aligned_cols=148 Identities=11% Similarity=0.070 Sum_probs=134.1
Q ss_pred CCCCCCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCc
Q 039985 96 TTSPANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHK 175 (357)
Q Consensus 96 ~~~~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~ 175 (357)
..+..|.||||+|+..|+.++++.|++.+++ .+..|.+|.| |||+|+..|+.+++++|++.++..+
T Consensus 553 ~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gad-------in~~d~~G~T-pL~~A~~~g~~~iv~~L~~~~~~~~------ 618 (823)
T PLN03192 553 IGDSKGRTPLHIAASKGYEDCVLVLLKHACN-------VHIRDANGNT-ALWNAISAKHHKIFRILYHFASISD------ 618 (823)
T ss_pred CCCCCCCCHHHHHHHcChHHHHHHHHhcCCC-------CCCcCCCCCC-HHHHHHHhCCHHHHHHHHhcCcccC------
Confidence 3455699999999999999999999999998 7788999999 9999999999999999998876543
Q ss_pred cCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCC
Q 039985 176 KDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKK 255 (357)
Q Consensus 176 ~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~ 255 (357)
. ..|.+|||+||..|+.++++.|+++|++++ .+|.+|+||||+|+..|+.+++++|++ .+++++..|..
T Consensus 619 -~--~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadin---~~d~~G~TpLh~A~~~g~~~iv~~Ll~-----~GAdv~~~~~~ 687 (823)
T PLN03192 619 -P--HAAGDLLCTAAKRNDLTAMKELLKQGLNVD---SEDHQGATALQVAMAEDHVDMVRLLIM-----NGADVDKANTD 687 (823)
T ss_pred -c--ccCchHHHHHHHhCCHHHHHHHHHCCCCCC---CCCCCCCCHHHHHHHCCcHHHHHHHHH-----cCCCCCCCCCC
Confidence 1 127799999999999999999999999998 999999999999999999999999998 78899999998
Q ss_pred C-CcHHHHHHHcCC
Q 039985 256 G-YTLLHHVADMKH 268 (357)
Q Consensus 256 G-~TpLh~Aa~~g~ 268 (357)
| .||++++.....
T Consensus 688 g~~t~~~l~~~~~~ 701 (823)
T PLN03192 688 DDFSPTELRELLQK 701 (823)
T ss_pred CCCCHHHHHHHHHH
Confidence 8 999999876543
|
|
| >PHA02743 Viral ankyrin protein; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.3e-22 Score=170.98 Aligned_cols=138 Identities=16% Similarity=0.096 Sum_probs=118.8
Q ss_pred CCCCCCHHHHHHhcCCH----HHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHH---HHHHHHHcCCCCCC
Q 039985 98 SPANISTISLGLGKGNM----LKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAE---LVELFVKKDCTIKG 170 (357)
Q Consensus 98 ~~~g~t~Lh~A~~~g~~----~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~---iv~~Ll~~g~~~~~ 170 (357)
...+.++||.||+.|+. ++++.|++.+.. .+..|..|+| |||+|+..|+.+ ++++|+++|++++
T Consensus 17 ~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~-------~~~~d~~g~t-~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin- 87 (166)
T PHA02743 17 DEDEQNTFLRICRTGNIYELMEVAPFISGDGHL-------LHRYDHHGRQ-CTHMVAWYDRANAVMKIELLVNMGADIN- 87 (166)
T ss_pred ccCCCcHHHHHHHcCCHHHHHHHHHHHhhcchh-------hhccCCCCCc-HHHHHHHhCccCHHHHHHHHHHcCCCCC-
Confidence 34577999999999998 555566666665 5667899999 999999998865 4899999999987
Q ss_pred CCCCccCCC-cCcchHHHHHHHCCCHHHHHHHHh-hCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccc
Q 039985 171 VPNHKKDKN-WAIRLTLLFAASNGITEILKEIIH-QHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKW 248 (357)
Q Consensus 171 ~~~~~~~~~-~~G~TpLh~Aa~~G~~~iv~~Ll~-~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~ 248 (357)
.++ ..|.||||+|+..|+.+++++|+. .|+++. .+|..|+||||+|+..++.+++++|+. .+++
T Consensus 88 ------~~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~---~~d~~g~tpL~~A~~~~~~~iv~~Ll~-----~ga~ 153 (166)
T PHA02743 88 ------ARELGTGNTLLHIAASTKNYELAEWLCRQLGVNLG---AINYQHETAYHIAYKMRDRRMMEILRA-----NGAV 153 (166)
T ss_pred ------CCCCCCCCcHHHHHHHhCCHHHHHHHHhccCCCcc---CcCCCCCCHHHHHHHcCCHHHHHHHHH-----cCCC
Confidence 444 359999999999999999999995 799988 899999999999999999999999988 6788
Q ss_pred cccccCCCCc
Q 039985 249 ASRIDKKGYT 258 (357)
Q Consensus 249 ~~~~d~~G~T 258 (357)
++.++..|..
T Consensus 154 ~~~~~~~~~~ 163 (166)
T PHA02743 154 CDDPLSIGLS 163 (166)
T ss_pred CCCcccCCcc
Confidence 9998887753
|
|
| >PHA02730 ankyrin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.8e-21 Score=195.14 Aligned_cols=137 Identities=11% Similarity=0.114 Sum_probs=109.2
Q ss_pred HHHHHHhcC---cHHHHHHHHHcCCCCCCCCCCccCCCcCcchHHHHHHHCCC----HHHHHHHHhhCC--CcccccccC
Q 039985 145 KAKKFVDFS---AAELVELFVKKDCTIKGVPNHKKDKNWAIRLTLLFAASNGI----TEILKEIIHQHP--QAILLDNLN 215 (357)
Q Consensus 145 pLh~A~~~g---~~~iv~~Ll~~g~~~~~~~~~~~~~~~~G~TpLh~Aa~~G~----~~iv~~Ll~~~~--~~~~~~~~d 215 (357)
.||.-...+ +.+++++|+++|++++. + ..|.||||+|+..++ .+++++|+++|+ +++ .+|
T Consensus 346 ~l~~Y~~~~~~v~ieIvelLIs~GAdIN~-------k-~~G~TpLH~Aa~~nnn~i~~eIvelLIs~Ga~~dIN---~kd 414 (672)
T PHA02730 346 MLINYLHYGDMVSIPILRCMLDNGATMDK-------T-TDNNYPLHDYFVNNNNIVDVNVVRFIVENNGHMAIN---HVS 414 (672)
T ss_pred HHHHHHhcCCcCcHHHHHHHHHCCCCCCc-------C-CCCCcHHHHHHHHcCCcchHHHHHHHHHcCCCcccc---ccc
Confidence 466666655 68999999999999982 2 349999999999885 899999999998 466 889
Q ss_pred CCCChHHHH---HHHcC---------CHHHHHHHHhhhccCCccccccccCCCCcHHHHHHHcCCCCCCCCCCChhHHHH
Q 039985 216 EKEQNILHV---AVKRR---------QYKVFELITKEMQLSVPKWASRIDKKGYTLLHHVADMKHYKEGTRPGPVLQFQE 283 (357)
Q Consensus 216 ~~G~TpLh~---A~~~g---------~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~~~~~t~L~la~ 283 (357)
..|+||||. |...+ ..+++++|++ .++++|.+|..|+||||+|+..++.
T Consensus 415 ~~G~T~Lh~~i~a~~~n~~~~~~e~~~~~ivk~LIs-----~GADINakD~~G~TPLh~Aa~~~~~-------------- 475 (672)
T PHA02730 415 NNGRLCMYGLILSRFNNCGYHCYETILIDVFDILSK-----YMDDIDMIDNENKTLLYYAVDVNNI-------------- 475 (672)
T ss_pred cCCCchHhHHHHHHhccccccccchhHHHHHHHHHh-----cccchhccCCCCCCHHHHHHHhCCH--------------
Confidence 999999994 43332 2357999988 7899999999999999999998863
Q ss_pred HhhhHHHHHHhc-cCcccccccc-cCCCCHHHHHhh
Q 039985 284 ELQLFEHVKEIM-PRHYAMHRDE-KNKMTASDLFNL 317 (357)
Q Consensus 284 ~l~~~~~v~~ll-~~~~~~~~n~-~g~~Tp~dl~~~ 317 (357)
+.++.++ .+++.+.+|. .|. ||++.+..
T Consensus 476 -----eive~LI~~GAdIN~~d~~~g~-TaL~~Aa~ 505 (672)
T PHA02730 476 -----QFARRLLEYGASVNTTSRSIIN-TAIQKSSY 505 (672)
T ss_pred -----HHHHHHHHCCCCCCCCCCcCCc-CHHHHHHH
Confidence 3455555 3457788886 588 99998864
|
|
| >PHA02792 ankyrin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.7e-21 Score=191.14 Aligned_cols=186 Identities=9% Similarity=0.056 Sum_probs=143.3
Q ss_pred CCCCCCCCHHHHHHhcC-------CHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcC--cHHHHHHHHHcCC
Q 039985 96 TTSPANISTISLGLGKG-------NMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFS--AAELVELFVKKDC 166 (357)
Q Consensus 96 ~~~~~g~t~Lh~A~~~g-------~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g--~~~iv~~Ll~~g~ 166 (357)
..+..|.||||+|+.++ +.++++.|++++++ .+..|..|.| |||+|+... ..|++++|++..-
T Consensus 170 ~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g~~-------~~~~d~~g~t-~l~~~~~~~~i~~ei~~~L~~~~~ 241 (631)
T PHA02792 170 YDDRMGKTVLYYYIITRSQDGYATSLDVINYLISHEKE-------MRYYTYREHT-TLYYYVDKCDIKREIFDALFDSNY 241 (631)
T ss_pred cCCCCCCchHHHHHhhCCcccccCCHHHHHHHHhCCCC-------cCccCCCCCh-HHHHHHHcccchHHHHHHHHhccc
Confidence 44566999999999999 89999999999998 7788999999 999999999 7889998887421
Q ss_pred C----------------------CC--------------CC---------------------------------------
Q 039985 167 T----------------------IK--------------GV--------------------------------------- 171 (357)
Q Consensus 167 ~----------------------~~--------------~~--------------------------------------- 171 (357)
+ ++ .+
T Consensus 242 ~~~~~~~~l~~y~~~~~~~~~~~id~~iv~~ll~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~q~~l~~Yl~~~~v~i 321 (631)
T PHA02792 242 SGNELMNILSNYLRKQYRNKNHKIDNYIVDKLLSGHDTFYILELCNSLRNNIIISSILKRYTDSIQDLLSEYVSYHTVYI 321 (631)
T ss_pred cccchHhHHHHHHHHHhccCccCccHHHHHHHHhCCCccchhhhhhhhhhhhHHHHHHHHHhHHHHHHHHHHHhcCCccH
Confidence 0 00 00
Q ss_pred -------CCCccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCC--ChHHHHHHHcCCHH---HHHHHHh
Q 039985 172 -------PNHKKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKE--QNILHVAVKRRQYK---VFELITK 239 (357)
Q Consensus 172 -------~~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G--~TpLh~A~~~g~~~---iv~~Ll~ 239 (357)
...-+.....+..++|.||..|+.++|++|+++|++++ .+|..| .||||+|+.....+ ++++|++
T Consensus 322 eiIK~LId~Ga~~~r~~~~n~~~~Aa~~gn~eIVelLIs~GADIN---~kD~~g~~~TpLh~A~~n~~~~v~~IlklLIs 398 (631)
T PHA02792 322 NVIKCMIDEGATLYRFKHINKYFQKFDNRDPKVVEYILKNGNVVV---EDDDNIINIMPLFPTLSIHESDVLSILKLCKP 398 (631)
T ss_pred HHHHHHHHCCCccccCCcchHHHHHHHcCCHHHHHHHHHcCCchh---hhcCCCCChhHHHHHHHhccHhHHHHHHHHHh
Confidence 00000001125667889999999999999999999998 777764 69999887776654 4677766
Q ss_pred hhccCCccccccccCCCCcHHHHHHHcCCCCCCCCCCChhHHHHHhhhHHHHHHhc-cCcccccccccCCCCHHHHHhh
Q 039985 240 EMQLSVPKWASRIDKKGYTLLHHVADMKHYKEGTRPGPVLQFQEELQLFEHVKEIM-PRHYAMHRDEKNKMTASDLFNL 317 (357)
Q Consensus 240 ~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~~~~~t~L~la~~l~~~~~v~~ll-~~~~~~~~n~~g~~Tp~dl~~~ 317 (357)
.++++|.+|..|.||||+|+..++. +.++.++ .+.+.+.+|..|+ ||+++|..
T Consensus 399 -----~GADIN~kD~~G~TPLh~Aa~~~n~-------------------eivelLLs~GADIN~kD~~G~-TpL~~A~~ 452 (631)
T PHA02792 399 -----YIDDINKIDKHGRSILYYCIESHSV-------------------SLVEWLIDNGADINITTKYGS-TCIGICVI 452 (631)
T ss_pred -----cCCccccccccCcchHHHHHHcCCH-------------------HHHHHHHHCCCCCCCcCCCCC-CHHHHHHH
Confidence 6889999999999999999988863 3344455 3457889999999 99999854
|
|
| >PHA02795 ankyrin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=8.4e-22 Score=189.12 Aligned_cols=174 Identities=10% Similarity=-0.003 Sum_probs=145.8
Q ss_pred HHHhcCCHHHHHHHHhcCcc-hhHHHhhhhhcCCCCCcHHHHHHHh--cCcHHHHHHHHHcCCCCCCCCCCccCCCcCcc
Q 039985 107 LGLGKGNMLKAKKLVDFSAG-ELDELLLKKDCTNKGNMIKAKKFVD--FSAAELVELFVKKDCTIKGVPNHKKDKNWAIR 183 (357)
Q Consensus 107 ~A~~~g~~~~vk~Ll~~~~~-~~~~~l~~~~~~~~g~t~pLh~A~~--~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~G~ 183 (357)
+|+..+..++++.|+..++. .+-+.. . ..++.++| +||+|+. .|+.++|++|+++|++++. + ++.
T Consensus 83 ~~~~~~~k~~~~~l~s~~~~~~~~~~~-~-~~~~~~~~-~L~~~~~n~~n~~eiV~~LI~~GADIn~-------~--~~~ 150 (437)
T PHA02795 83 LFAYITYKDIISALVSKNYMEDIFSII-I-KNCNSVQD-LLLYYLSNAYVEIDIVDFMVDHGAVIYK-------I--ECL 150 (437)
T ss_pred HHhhcchHHHHHHHHhcccccchhhhh-h-hccccccH-HHHHHHHhcCCCHHHHHHHHHCCCCCCC-------C--CCC
Confidence 89999999999999999998 211111 1 46777999 9999999 8999999999999999872 2 268
Q ss_pred hHHHHHHHCCCHHHHHHHHhhCCCccccccc-----CCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCc
Q 039985 184 LTLLFAASNGITEILKEIIHQHPQAILLDNL-----NEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYT 258 (357)
Q Consensus 184 TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~-----d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~T 258 (357)
||||+|+..|+.+++++|+++|++.. +.. +..|.|++|.|+.+++.+++++|++ .++++|.+|.+|.|
T Consensus 151 t~lh~A~~~~~~eIVk~Lls~Ga~~~--n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs-----~GADIN~kD~~G~T 223 (437)
T PHA02795 151 NAYFRGICKKESSVVEFILNCGIPDE--NDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIP-----YIEDINQLDAGGRT 223 (437)
T ss_pred CHHHHHHHcCcHHHHHHHHhcCCccc--ccccchhhhhhccchhHHHHhcCHHHHHHHHHh-----CcCCcCcCCCCCCC
Confidence 99999999999999999999998554 233 2458899999999999999999988 78999999999999
Q ss_pred HHHHHHHcCCCCCCCCCCChhHHHHHhhhHHHHHHhc-cCcccccccccCCCCHHHHHhhhh
Q 039985 259 LLHHVADMKHYKEGTRPGPVLQFQEELQLFEHVKEIM-PRHYAMHRDEKNKMTASDLFNLTH 319 (357)
Q Consensus 259 pLh~Aa~~g~~~~~~~~~t~L~la~~l~~~~~v~~ll-~~~~~~~~n~~g~~Tp~dl~~~~~ 319 (357)
|||+|+..|+. +.++.++ .+.+.+.+|..|. ||+++|....
T Consensus 224 pLh~Aa~~g~~-------------------eiVelLL~~GAdIN~~d~~G~-TpLh~Aa~~g 265 (437)
T PHA02795 224 LLYRAIYAGYI-------------------DLVSWLLENGANVNAVMSNGY-TCLDVAVDRG 265 (437)
T ss_pred HHHHHHHcCCH-------------------HHHHHHHHCCCCCCCcCCCCC-CHHHHHHHcC
Confidence 99999999973 3455566 3458889999999 9999997644
|
|
| >KOG0514 consensus Ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.1e-22 Score=184.50 Aligned_cols=156 Identities=13% Similarity=0.118 Sum_probs=136.1
Q ss_pred CCCCCCCCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhc-----CcHHHHHHHHHcCCCC
Q 039985 94 SSTTSPANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDF-----SAAELVELFVKKDCTI 168 (357)
Q Consensus 94 ~~~~~~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~-----g~~~iv~~Ll~~g~~~ 168 (357)
.+..+.+|+|+||+|+..+|+++|+.||+.+--+ .+.+|+-|+| |+++|+.. .+.++|+.|.+-|. +
T Consensus 261 VNlaDsNGNTALHYsVSHaNF~VV~~LLDSgvC~------VD~qNrAGYt-piMLaALA~lk~~~d~~vV~~LF~mgn-V 332 (452)
T KOG0514|consen 261 VNLADSNGNTALHYAVSHANFDVVSILLDSGVCD------VDQQNRAGYT-PVMLAALAKLKQPADRTVVERLFKMGD-V 332 (452)
T ss_pred hhhhcCCCCeeeeeeecccchHHHHHHhccCccc------cccccccccc-HHHHHHHHhhcchhhHHHHHHHHhccC-c
Confidence 4555678999999999999999999999998763 4568999999 99998874 46789999988763 3
Q ss_pred CCCCCCccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccc
Q 039985 169 KGVPNHKKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKW 248 (357)
Q Consensus 169 ~~~~~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~ 248 (357)
+.- . ...|+|+||+|+.+|+.++|+.||..|+|++ .+|.+|-|+|++||++||.+||++||.. ...+
T Consensus 333 NaK-A-----sQ~gQTALMLAVSHGr~d~vk~LLacgAdVN---iQDdDGSTALMCA~EHGhkEivklLLA~----p~cd 399 (452)
T KOG0514|consen 333 NAK-A-----SQHGQTALMLAVSHGRVDMVKALLACGADVN---IQDDDGSTALMCAAEHGHKEIVKLLLAV----PSCD 399 (452)
T ss_pred chh-h-----hhhcchhhhhhhhcCcHHHHHHHHHccCCCc---cccCCccHHHhhhhhhChHHHHHHHhcc----Cccc
Confidence 311 1 1249999999999999999999999999999 9999999999999999999999999987 5678
Q ss_pred cccccCCCCcHHHHHHHcCCCC
Q 039985 249 ASRIDKKGYTLLHHVADMKHYK 270 (357)
Q Consensus 249 ~~~~d~~G~TpLh~Aa~~g~~~ 270 (357)
+...|.+|.|+|.+|-..||-+
T Consensus 400 ~sLtD~DgSTAl~IAleagh~e 421 (452)
T KOG0514|consen 400 ISLTDVDGSTALSIALEAGHRE 421 (452)
T ss_pred ceeecCCCchhhhhHHhcCchH
Confidence 8899999999999999999844
|
|
| >KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.8e-22 Score=171.80 Aligned_cols=186 Identities=15% Similarity=0.111 Sum_probs=163.1
Q ss_pred CCCCCCCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCC
Q 039985 95 STTSPANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNH 174 (357)
Q Consensus 95 ~~~~~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~ 174 (357)
..+++.|.+++|.|+..|+.+.+...+..+.. .++.+.-+.+ |+.+++...+.+++..|.+...+
T Consensus 90 ~~t~p~g~~~~~v~ap~~s~~k~sttltN~~r-------gnevs~~p~s-~~slsVhql~L~~~~~~~~n~VN------- 154 (296)
T KOG0502|consen 90 DETDPEGWSALLVAAPCGSVDKVSTTLTNGAR-------GNEVSLMPWS-PLSLSVHQLHLDVVDLLVNNKVN------- 154 (296)
T ss_pred CCCCchhhhhhhhcCCCCCcceeeeeeccccc-------CCccccccCC-hhhHHHHHHHHHHHHHHhhcccc-------
Confidence 44556699999999999999999999999988 7788899999 99999999999998888776443
Q ss_pred ccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccC
Q 039985 175 KKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDK 254 (357)
Q Consensus 175 ~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~ 254 (357)
..|..|+|||+||++.||+.+|++||+.|+++. ..-+...|+|.+|+..|..+||++||. .+.++|..|.
T Consensus 155 --~~De~GfTpLiWAaa~G~i~vV~fLL~~GAdp~---~lgk~resALsLAt~ggytdiV~lLL~-----r~vdVNvyDw 224 (296)
T KOG0502|consen 155 --ACDEFGFTPLIWAAAKGHIPVVQFLLNSGADPD---ALGKYRESALSLATRGGYTDIVELLLT-----REVDVNVYDW 224 (296)
T ss_pred --CccccCchHhHHHHhcCchHHHHHHHHcCCChh---hhhhhhhhhHhHHhcCChHHHHHHHHh-----cCCCcceecc
Confidence 556679999999999999999999999999998 888889999999999999999999998 7889999999
Q ss_pred CCCcHHHHHHHcCCCCCCCCCCChhHHHHHhhhHHHHHHhccC-cccccccccCCCCHHHHHhhhhHHHHHH
Q 039985 255 KGYTLLHHVADMKHYKEGTRPGPVLQFQEELQLFEHVKEIMPR-HYAMHRDEKNKMTASDLFNLTHEDQLRK 325 (357)
Q Consensus 255 ~G~TpLh~Aa~~g~~~~~~~~~t~L~la~~l~~~~~v~~ll~~-~~~~~~n~~g~~Tp~dl~~~~~~~~~~~ 325 (357)
+|-|||-+|++.+| .++|+.++.+ ++.+..++.|- ++.|+|....-..+++
T Consensus 225 NGgTpLlyAvrgnh-------------------vkcve~Ll~sGAd~t~e~dsGy-~~mdlAValGyr~Vqq 276 (296)
T KOG0502|consen 225 NGGTPLLYAVRGNH-------------------VKCVESLLNSGADVTQEDDSGY-WIMDLAVALGYRIVQQ 276 (296)
T ss_pred CCCceeeeeecCCh-------------------HHHHHHHHhcCCCcccccccCC-cHHHHHHHhhhHHHHH
Confidence 99999999999886 4678888854 58899999998 9999997655444443
|
|
| >TIGR00870 trp transient-receptor-potential calcium channel protein | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.1e-21 Score=204.97 Aligned_cols=192 Identities=13% Similarity=0.072 Sum_probs=136.3
Q ss_pred CCCCHHH-HHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcC---cHHHHHHHHHcCCCCC---CCC
Q 039985 100 ANISTIS-LGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFS---AAELVELFVKKDCTIK---GVP 172 (357)
Q Consensus 100 ~g~t~Lh-~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g---~~~iv~~Ll~~g~~~~---~~~ 172 (357)
.|+|||| .|+..++.++++.|++.+. .+..|.| |||.|+..+ ...++..+...+.... ...
T Consensus 51 ~G~t~Lh~~A~~~~~~eiv~lLl~~g~-----------~~~~G~T-~Lh~A~~~~~~~v~~ll~~l~~~~~~~~~~~~~~ 118 (743)
T TIGR00870 51 LGRSALFVAAIENENLELTELLLNLSC-----------RGAVGDT-LLHAISLEYVDAVEAILLHLLAAFRKSGPLELAN 118 (743)
T ss_pred cchhHHHHHHHhcChHHHHHHHHhCCC-----------CCCcChH-HHHHHHhccHHHHHHHHHHHhhcccccCchhhhc
Confidence 4889999 8999999999999998765 3678999 999999732 2334444444443211 001
Q ss_pred CCccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccC--------------CCCChHHHHHHHcCCHHHHHHHH
Q 039985 173 NHKKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLN--------------EKEQNILHVAVKRRQYKVFELIT 238 (357)
Q Consensus 173 ~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d--------------~~G~TpLh~A~~~g~~~iv~~Ll 238 (357)
+.....+..|.||||+||.+|+.++|++|+++|++++ .++ ..|+||||+|+..|+.+++++|+
T Consensus 119 ~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~---~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl 195 (743)
T TIGR00870 119 DQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVP---ARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLS 195 (743)
T ss_pred cccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCCCC---cCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHh
Confidence 1111234469999999999999999999999999987 432 36999999999999999999998
Q ss_pred hhhccCCccccccccCCCCcHHHHHHHcCCCCCCCCCCChhHHHHHhhhHHHHHHhccC-ccc----ccccccCCCCHHH
Q 039985 239 KEMQLSVPKWASRIDKKGYTLLHHVADMKHYKEGTRPGPVLQFQEELQLFEHVKEIMPR-HYA----MHRDEKNKMTASD 313 (357)
Q Consensus 239 ~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~~~~~t~L~la~~l~~~~~v~~ll~~-~~~----~~~n~~g~~Tp~d 313 (357)
+ .+++++.+|..|+||||+|+..+.... .-..+... ..+.+..++.. .+. ...|++|. ||++
T Consensus 196 ~-----~gadin~~d~~g~T~Lh~A~~~~~~~~-----~~~~l~~~--~~~~l~~ll~~~~~~~el~~i~N~~g~-TPL~ 262 (743)
T TIGR00870 196 E-----DPADILTADSLGNTLLHLLVMENEFKA-----EYEELSCQ--MYNFALSLLDKLRDSKELEVILNHQGL-TPLK 262 (743)
T ss_pred c-----CCcchhhHhhhhhHHHHHHHhhhhhhH-----HHHHHHHH--HHHHHHHHHhccCChHhhhhhcCCCCC-Cchh
Confidence 7 678999999999999999999874320 00001111 11112222211 122 56899999 9999
Q ss_pred HHhhhh
Q 039985 314 LFNLTH 319 (357)
Q Consensus 314 l~~~~~ 319 (357)
+|.+..
T Consensus 263 ~A~~~g 268 (743)
T TIGR00870 263 LAAKEG 268 (743)
T ss_pred hhhhcC
Confidence 987543
|
after chronic exposure to capsaicin. (McCleskey and Gold, 1999). |
| >PHA02741 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.7e-21 Score=167.09 Aligned_cols=125 Identities=10% Similarity=0.114 Sum_probs=110.6
Q ss_pred CCCCCCHHHHHHhcCCHHHHHHHHhcC------cchhHHHhhhhhcCCCCCcHHHHHHHhcCc----HHHHHHHHHcCCC
Q 039985 98 SPANISTISLGLGKGNMLKAKKLVDFS------AGELDELLLKKDCTNKGNMIKAKKFVDFSA----AELVELFVKKDCT 167 (357)
Q Consensus 98 ~~~g~t~Lh~A~~~g~~~~vk~Ll~~~------~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~----~~iv~~Ll~~g~~ 167 (357)
+..|.|+||+|++.|+.++++.|+... +. .+..|..|.| |||+|+..|+ .+++++|++.|++
T Consensus 18 ~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~-------in~~d~~g~T-~Lh~A~~~g~~~~~~~ii~~Ll~~gad 89 (169)
T PHA02741 18 NSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAA-------LNATDDAGQM-CIHIAAEKHEAQLAAEIIDHLIELGAD 89 (169)
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhh-------hhccCCCCCc-HHHHHHHcCChHHHHHHHHHHHHcCCC
Confidence 345999999999999999999987532 22 5668899999 9999999998 5899999999999
Q ss_pred CCCCCCCccCCCc-CcchHHHHHHHCCCHHHHHHHHh-hCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhh
Q 039985 168 IKGVPNHKKDKNW-AIRLTLLFAASNGITEILKEIIH-QHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKE 240 (357)
Q Consensus 168 ~~~~~~~~~~~~~-~G~TpLh~Aa~~G~~~iv~~Ll~-~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~ 240 (357)
++ .++. .|.||||+|+..|+.+++++|++ .++++. .+|..|+||||+|+..++.+++++|++.
T Consensus 90 in-------~~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~---~~n~~g~tpL~~A~~~~~~~iv~~L~~~ 154 (169)
T PHA02741 90 IN-------AQEMLEGDTALHLAAHRRDHDLAEWLCCQPGIDLH---FCNADNKSPFELAIDNEDVAMMQILREI 154 (169)
T ss_pred CC-------CCCcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCC---cCCCCCCCHHHHHHHCCCHHHHHHHHHH
Confidence 87 4443 59999999999999999999998 588887 8999999999999999999999999874
|
|
| >PHA02741 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.2e-21 Score=166.45 Aligned_cols=119 Identities=13% Similarity=0.117 Sum_probs=105.5
Q ss_pred hhcCCCCCcHHHHHHHhcCcHHHHHHHHHc------CCCCCCCCCCccCCCcCcchHHHHHHHCCC----HHHHHHHHhh
Q 039985 135 KDCTNKGNMIKAKKFVDFSAAELVELFVKK------DCTIKGVPNHKKDKNWAIRLTLLFAASNGI----TEILKEIIHQ 204 (357)
Q Consensus 135 ~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~------g~~~~~~~~~~~~~~~~G~TpLh~Aa~~G~----~~iv~~Ll~~ 204 (357)
+..|..|.| |||+|+..|+.+++++|+.. |++++ .+|..|.||||+|+..|+ .+++++|+++
T Consensus 15 ~~~~~~g~t-~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in-------~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~ 86 (169)
T PHA02741 15 AEKNSEGEN-FFHEAARCGCFDIIARFTPFIRGDCHAAALN-------ATDDAGQMCIHIAAEKHEAQLAAEIIDHLIEL 86 (169)
T ss_pred hccccCCCC-HHHHHHHcCCHHHHHHHHHHhccchhhhhhh-------ccCCCCCcHHHHHHHcCChHHHHHHHHHHHHc
Confidence 456789999 99999999999999998653 45554 667779999999999999 5899999999
Q ss_pred CCCcccccccCC-CCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcHHHHHHHcCC
Q 039985 205 HPQAILLDNLNE-KEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTLLHHVADMKH 268 (357)
Q Consensus 205 ~~~~~~~~~~d~-~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~ 268 (357)
|++++ .+|. .|+||||+|+..++.+++++|+.. .+.+++.+|.+|.||||+|+..|+
T Consensus 87 gadin---~~~~~~g~TpLh~A~~~~~~~iv~~Ll~~----~g~~~~~~n~~g~tpL~~A~~~~~ 144 (169)
T PHA02741 87 GADIN---AQEMLEGDTALHLAAHRRDHDLAEWLCCQ----PGIDLHFCNADNKSPFELAIDNED 144 (169)
T ss_pred CCCCC---CCCcCCCCCHHHHHHHcCCHHHHHHHHhC----CCCCCCcCCCCCCCHHHHHHHCCC
Confidence 99998 7785 899999999999999999999873 467899999999999999999997
|
|
| >KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.3e-21 Score=185.80 Aligned_cols=175 Identities=18% Similarity=0.201 Sum_probs=153.5
Q ss_pred HHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCcCcc
Q 039985 104 TISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNWAIR 183 (357)
Q Consensus 104 ~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~G~ 183 (357)
.+..|+..|+.+-+..|+..+.+ .+.++.+|.| +||-++...+.+||++|+++|++++ ..|..|+
T Consensus 43 ~~l~A~~~~d~~ev~~ll~~ga~-------~~~~n~DglT-alhq~~id~~~e~v~~l~e~ga~Vn-------~~d~e~w 107 (527)
T KOG0505|consen 43 VFLEACSRGDLEEVRKLLNRGAS-------PNLCNVDGLT-ALHQACIDDNLEMVKFLVENGANVN-------AQDNEGW 107 (527)
T ss_pred HHHhccccccHHHHHHHhccCCC-------ccccCCccch-hHHHHHhcccHHHHHHHHHhcCCcc-------ccccccC
Confidence 46678899999999999999988 6889999999 9999999999999999999999998 6666799
Q ss_pred hHHHHHHHCCCHHHHHHHHhhCCCcccc----------------------------------------------------
Q 039985 184 LTLLFAASNGITEILKEIIHQHPQAILL---------------------------------------------------- 211 (357)
Q Consensus 184 TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~---------------------------------------------------- 211 (357)
||||.|+..||..++++|+.+|++...+
T Consensus 108 tPlhaaascg~~~i~~~li~~gA~~~avNsdg~~P~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~~ 187 (527)
T KOG0505|consen 108 TPLHAAASCGYLNIVEYLIQHGANLLAVNSDGNMPYDLAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLNA 187 (527)
T ss_pred CcchhhcccccHHHHHHHHHhhhhhhhccCCCCCccccccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHhc
Confidence 9999999999999999999999877533
Q ss_pred ----cccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcHHHHHHHcCCCCCCCCCCChhHHHHHhhh
Q 039985 212 ----DNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTLLHHVADMKHYKEGTRPGPVLQFQEELQL 287 (357)
Q Consensus 212 ----~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~~~~~t~L~la~~l~~ 287 (357)
+..+..|-|.||+|+.+|..++.++|+. .+..++.+|.+|+||||.||..|..
T Consensus 188 G~~~d~~~~rG~T~lHvAaa~Gy~e~~~lLl~-----ag~~~~~~D~dgWtPlHAAA~Wg~~------------------ 244 (527)
T KOG0505|consen 188 GAELDARHARGATALHVAAANGYTEVAALLLQ-----AGYSVNIKDYDGWTPLHAAAHWGQE------------------ 244 (527)
T ss_pred cccccccccccchHHHHHHhhhHHHHHHHHHH-----hccCcccccccCCCcccHHHHhhhH------------------
Confidence 5556668999999999999999999988 6789999999999999999999963
Q ss_pred HHHHHHhc-cCcccccccccCCCCHHHHHhhh
Q 039985 288 FEHVKEIM-PRHYAMHRDEKNKMTASDLFNLT 318 (357)
Q Consensus 288 ~~~v~~ll-~~~~~~~~n~~g~~Tp~dl~~~~ 318 (357)
+.++.++ ...+.+.++..|+ ||+|++.+.
T Consensus 245 -~~~elL~~~ga~~d~~t~~g~-~p~dv~dee 274 (527)
T KOG0505|consen 245 -DACELLVEHGADMDAKTKMGE-TPLDVADEE 274 (527)
T ss_pred -hHHHHHHHhhcccchhhhcCC-CCccchhhh
Confidence 2344333 3458888999999 999999763
|
|
| >PHA02736 Viral ankyrin protein; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.1e-21 Score=163.90 Aligned_cols=128 Identities=16% Similarity=0.081 Sum_probs=103.2
Q ss_pred CCCCCCHHHHHHhcCCHHHHHHHHhcCcc-hhHHHhhhhhcCCCCCcHHHHHHHhcCcH---HHHHHHHHcCCCCCCCCC
Q 039985 98 SPANISTISLGLGKGNMLKAKKLVDFSAG-ELDELLLKKDCTNKGNMIKAKKFVDFSAA---ELVELFVKKDCTIKGVPN 173 (357)
Q Consensus 98 ~~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~-~~~~~l~~~~~~~~g~t~pLh~A~~~g~~---~iv~~Ll~~g~~~~~~~~ 173 (357)
+..|.||||+||+.|+. +.+++..... +.+. ......|.+|.| |||+|+..|+. +++++|++.|++++
T Consensus 14 d~~g~tpLh~A~~~g~~--~~l~~~~~~~~~~~~-~~~~~~d~~g~t-~Lh~a~~~~~~~~~e~v~~Ll~~gadin---- 85 (154)
T PHA02736 14 DIEGENILHYLCRNGGV--TDLLAFKNAISDENR-YLVLEYNRHGKQ-CVHIVSNPDKADPQEKLKLLMEWGADIN---- 85 (154)
T ss_pred CCCCCCHHHHHHHhCCH--HHHHHHHHHhcchhH-HHHHHhcCCCCE-EEEeecccCchhHHHHHHHHHHcCCCcc----
Confidence 44599999999999994 2333222111 0000 113457899999 99999999987 56899999999987
Q ss_pred CccCCC-cCcchHHHHHHHCCCHHHHHHHHhh-CCCcccccccCCCCChHHHHHHHcCCHHHHHHHHh
Q 039985 174 HKKDKN-WAIRLTLLFAASNGITEILKEIIHQ-HPQAILLDNLNEKEQNILHVAVKRRQYKVFELITK 239 (357)
Q Consensus 174 ~~~~~~-~~G~TpLh~Aa~~G~~~iv~~Ll~~-~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~ 239 (357)
.++ ..|.||||+|+..|+.+++++|+++ +++++ .+|..|+||||+|+..|+.+++++|+.
T Consensus 86 ---~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n---~~~~~g~tpL~~A~~~~~~~i~~~Ll~ 147 (154)
T PHA02736 86 ---GKERVFGNTPLHIAVYTQNYELATWLCNQPGVNME---ILNYAFKTPYYVACERHDAKMMNILRA 147 (154)
T ss_pred ---ccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCc---cccCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 444 3599999999999999999999984 88888 999999999999999999999999987
|
|
| >KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription] | Back alignment and domain information |
|---|
Probab=99.86 E-value=5.2e-21 Score=157.40 Aligned_cols=155 Identities=14% Similarity=0.081 Sum_probs=128.8
Q ss_pred HHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHH
Q 039985 145 KAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHV 224 (357)
Q Consensus 145 pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~ 224 (357)
-+.+|+..+....|+.||+..++..+ .+|.+|.||||.|+.+||.+||+.|+..|++.. .+...||||||-
T Consensus 66 l~lwaae~nrl~eV~~lL~e~an~vN------trD~D~YTpLHRAaYn~h~div~~ll~~gAn~~---a~T~~GWTPLhS 136 (228)
T KOG0512|consen 66 LLLWAAEKNRLTEVQRLLSEKANHVN------TRDEDEYTPLHRAAYNGHLDIVHELLLSGANKE---AKTNEGWTPLHS 136 (228)
T ss_pred HHHHHHhhccHHHHHHHHHhcccccc------ccccccccHHHHHHhcCchHHHHHHHHccCCcc---cccccCccchhh
Confidence 46789999999999999999887542 677789999999999999999999999999999 999999999999
Q ss_pred HHHcCCHHHHHHHHhhhccCCccccccccCCCCcHHHHHHHcCCCCCCCCCCChhHHHHHhhhHHHHHHhccCc--cccc
Q 039985 225 AVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTLLHHVADMKHYKEGTRPGPVLQFQEELQLFEHVKEIMPRH--YAMH 302 (357)
Q Consensus 225 A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~~~~~t~L~la~~l~~~~~v~~ll~~~--~~~~ 302 (357)
||...+.+|+.+||. .++++|++.+.-.||||+||...+.+ ..++.++... ..-.
T Consensus 137 AckWnN~~va~~LLq-----hgaDVnA~t~g~ltpLhlaa~~rn~r------------------~t~~~Ll~dryi~pg~ 193 (228)
T KOG0512|consen 137 ACKWNNFEVAGRLLQ-----HGADVNAQTKGLLTPLHLAAGNRNSR------------------DTLELLLHDRYIHPGL 193 (228)
T ss_pred hhcccchhHHHHHHh-----ccCcccccccccchhhHHhhcccchH------------------HHHHHHhhccccChhh
Confidence 999999999999998 79999999999999999999888632 2334444222 3456
Q ss_pred ccccCCCCHHHHHhhh--hHHHHHHHHHHHHH
Q 039985 303 RDEKNKMTASDLFNLT--HEDQLRKAQEWIKE 332 (357)
Q Consensus 303 ~n~~g~~Tp~dl~~~~--~~~~~~~~~~~~~~ 332 (357)
+|..+. ||+++|... ...+.+..+..+..
T Consensus 194 ~nn~ee-ta~~iARRT~~s~~lfe~~e~~~~~ 224 (228)
T KOG0512|consen 194 KNNLEE-TAFDIARRTSMSHYLFEIVEGCMNS 224 (228)
T ss_pred hcCccc-hHHHHHHHhhhhHHHHHHHHHHhhC
Confidence 788899 999999865 45556655555543
|
|
| >PHA02884 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=7.3e-21 Score=175.83 Aligned_cols=126 Identities=10% Similarity=-0.004 Sum_probs=110.7
Q ss_pred hhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccc
Q 039985 134 KKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDN 213 (357)
Q Consensus 134 ~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~ 213 (357)
.+..|+.|.|.+||.|+..|+.+++++|+++|++++.... ..+..|.||||+|+..|+.+++++|+++|++++ .
T Consensus 25 ~~~~d~~~~~~lL~~A~~~~~~eivk~LL~~GAdiN~~~~---~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN---~ 98 (300)
T PHA02884 25 IKKKNKICIANILYSSIKFHYTDIIDAILKLGADPEAPFP---LSENSKTNPLIYAIDCDNDDAAKLLIRYGADVN---R 98 (300)
T ss_pred hhccCcCCCCHHHHHHHHcCCHHHHHHHHHCCCCccccCc---ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcC---c
Confidence 5668999999888999999999999999999999873211 013359999999999999999999999999998 6
Q ss_pred c-CCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcHHHHHHHcCCCC
Q 039985 214 L-NEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTLLHHVADMKHYK 270 (357)
Q Consensus 214 ~-d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~ 270 (357)
+ +..|.||||+|+..|+.+++++|+. .+++++.+|.+|.||||+|++.++..
T Consensus 99 ~~~~~g~TpLh~Aa~~~~~eivklLL~-----~GAdin~kd~~G~TpL~~A~~~~~~~ 151 (300)
T PHA02884 99 YAEEAKITPLYISVLHGCLKCLEILLS-----YGADINIQTNDMVTPIELALMICNNF 151 (300)
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHH-----CCCCCCCCCCCCCCHHHHHHHhCChh
Confidence 5 5689999999999999999999988 78999999999999999999977543
|
|
| >KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription] | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.2e-21 Score=157.91 Aligned_cols=145 Identities=10% Similarity=0.036 Sum_probs=128.4
Q ss_pred CHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCcCc
Q 039985 103 STISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNWAI 182 (357)
Q Consensus 103 t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~G 182 (357)
-.+.+|+..+....|+.||+..++. .+.+|.+|.| |||.|+++||.+||+.|+..|++.. .+...|
T Consensus 65 rl~lwaae~nrl~eV~~lL~e~an~------vNtrD~D~YT-pLHRAaYn~h~div~~ll~~gAn~~-------a~T~~G 130 (228)
T KOG0512|consen 65 RLLLWAAEKNRLTEVQRLLSEKANH------VNTRDEDEYT-PLHRAAYNGHLDIVHELLLSGANKE-------AKTNEG 130 (228)
T ss_pred HHHHHHHhhccHHHHHHHHHhcccc------cccccccccc-HHHHHHhcCchHHHHHHHHccCCcc-------cccccC
Confidence 3578999999999999999998883 5679999999 9999999999999999999999988 666679
Q ss_pred chHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCH-HHHHHHHhhhccCCccccccccCCCCcHHH
Q 039985 183 RLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQY-KVFELITKEMQLSVPKWASRIDKKGYTLLH 261 (357)
Q Consensus 183 ~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~-~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLh 261 (357)
+||||-||.-.+.+|+-.||++|+|++ ......+||||+||..++. ..+++|+.. .....-.++..+.||+.
T Consensus 131 WTPLhSAckWnN~~va~~LLqhgaDVn---A~t~g~ltpLhlaa~~rn~r~t~~~Ll~d----ryi~pg~~nn~eeta~~ 203 (228)
T KOG0512|consen 131 WTPLHSACKWNNFEVAGRLLQHGADVN---AQTKGLLTPLHLAAGNRNSRDTLELLLHD----RYIHPGLKNNLEETAFD 203 (228)
T ss_pred ccchhhhhcccchhHHHHHHhccCccc---ccccccchhhHHhhcccchHHHHHHHhhc----cccChhhhcCccchHHH
Confidence 999999999999999999999999999 8888999999999987764 667788764 44566677889999999
Q ss_pred HHHHcCC
Q 039985 262 HVADMKH 268 (357)
Q Consensus 262 ~Aa~~g~ 268 (357)
+|-+.+-
T Consensus 204 iARRT~~ 210 (228)
T KOG0512|consen 204 IARRTSM 210 (228)
T ss_pred HHHHhhh
Confidence 9998874
|
|
| >PHA02743 Viral ankyrin protein; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.3e-20 Score=161.16 Aligned_cols=120 Identities=10% Similarity=0.114 Sum_probs=105.0
Q ss_pred hhhcCCCCCcHHHHHHHhcCcH----HHHHHHHHcCCCCCCCCCCccCCCcCcchHHHHHHHCCCHHH---HHHHHhhCC
Q 039985 134 KKDCTNKGNMIKAKKFVDFSAA----ELVELFVKKDCTIKGVPNHKKDKNWAIRLTLLFAASNGITEI---LKEIIHQHP 206 (357)
Q Consensus 134 ~~~~~~~g~t~pLh~A~~~g~~----~iv~~Ll~~g~~~~~~~~~~~~~~~~G~TpLh~Aa~~G~~~i---v~~Ll~~~~ 206 (357)
+...+.++.+ +||.|+..|+. +++++|++.|+.++ .+|..|+||||+||..|+.++ +++|+++|+
T Consensus 13 ~~~~~~~~~~-~l~~a~~~g~~~~l~~~~~~l~~~g~~~~-------~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Ga 84 (166)
T PHA02743 13 AVEIDEDEQN-TFLRICRTGNIYELMEVAPFISGDGHLLH-------RYDHHGRQCTHMVAWYDRANAVMKIELLVNMGA 84 (166)
T ss_pred HhhhccCCCc-HHHHHHHcCCHHHHHHHHHHHhhcchhhh-------ccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCC
Confidence 4456778888 99999999998 67778888888776 556669999999999998654 899999999
Q ss_pred CcccccccC-CCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcHHHHHHHcCC
Q 039985 207 QAILLDNLN-EKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTLLHHVADMKH 268 (357)
Q Consensus 207 ~~~~~~~~d-~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~ 268 (357)
+++ .+| ..|+||||+|+..|+.+++++|+.. .+++++.+|.+|.||||+|+..++
T Consensus 85 din---~~d~~~g~TpLh~A~~~g~~~iv~~Ll~~----~gad~~~~d~~g~tpL~~A~~~~~ 140 (166)
T PHA02743 85 DIN---ARELGTGNTLLHIAASTKNYELAEWLCRQ----LGVNLGAINYQHETAYHIAYKMRD 140 (166)
T ss_pred CCC---CCCCCCCCcHHHHHHHhCCHHHHHHHHhc----cCCCccCcCCCCCCHHHHHHHcCC
Confidence 998 888 5899999999999999999999853 578899999999999999999997
|
|
| >KOG0514 consensus Ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.1e-20 Score=171.61 Aligned_cols=171 Identities=17% Similarity=0.166 Sum_probs=137.4
Q ss_pred CHHHHHHHHh-cCcc--hhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCC-CCCCCCCCccCCCcCcchHHHH
Q 039985 113 NMLKAKKLVD-FSAG--ELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDC-TIKGVPNHKKDKNWAIRLTLLF 188 (357)
Q Consensus 113 ~~~~vk~Ll~-~~~~--~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~-~~~~~~~~~~~~~~~G~TpLh~ 188 (357)
+.+.|+..|. +++- .+.+++ ++..|.+|+| +||||+..++.+||+.||+.|. +++ .+|..|+||+|+
T Consensus 238 ~pe~V~~~l~~f~als~~lL~yv-VNlaDsNGNT-ALHYsVSHaNF~VV~~LLDSgvC~VD-------~qNrAGYtpiML 308 (452)
T KOG0514|consen 238 DPEQVEDYLAYFEALSPPLLEYV-VNLADSNGNT-ALHYAVSHANFDVVSILLDSGVCDVD-------QQNRAGYTPVML 308 (452)
T ss_pred CHHHHHHHHHHHHhcChHHHHHH-hhhhcCCCCe-eeeeeecccchHHHHHHhccCccccc-------ccccccccHHHH
Confidence 4666655443 3332 333333 6779999999 9999999999999999999985 444 667779999999
Q ss_pred HHH-----CCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcHHHHH
Q 039985 189 AAS-----NGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTLLHHV 263 (357)
Q Consensus 189 Aa~-----~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLh~A 263 (357)
||- ..+.++|..|.+-| +++ -.....|+|+|++|+.+|+.++|+.||. .++++|.||.+|.|+|++|
T Consensus 309 aALA~lk~~~d~~vV~~LF~mg-nVN--aKAsQ~gQTALMLAVSHGr~d~vk~LLa-----cgAdVNiQDdDGSTALMCA 380 (452)
T KOG0514|consen 309 AALAKLKQPADRTVVERLFKMG-DVN--AKASQHGQTALMLAVSHGRVDMVKALLA-----CGADVNIQDDDGSTALMCA 380 (452)
T ss_pred HHHHhhcchhhHHHHHHHHhcc-Ccc--hhhhhhcchhhhhhhhcCcHHHHHHHHH-----ccCCCccccCCccHHHhhh
Confidence 885 35788999998765 555 3566789999999999999999999988 7899999999999999999
Q ss_pred HHcCCCCCCCCCCChhHHHHHhhhHHHHHHhc--cCcccccccccCCCCHHHHHhhhhH
Q 039985 264 ADMKHYKEGTRPGPVLQFQEELQLFEHVKEIM--PRHYAMHRDEKNKMTASDLFNLTHE 320 (357)
Q Consensus 264 a~~g~~~~~~~~~t~L~la~~l~~~~~v~~ll--~~~~~~~~n~~g~~Tp~dl~~~~~~ 320 (357)
|..||. +.++.|| +..+....|.+|- |++.+|-+..+
T Consensus 381 ~EHGhk-------------------EivklLLA~p~cd~sLtD~DgS-TAl~IAleagh 419 (452)
T KOG0514|consen 381 AEHGHK-------------------EIVKLLLAVPSCDISLTDVDGS-TALSIALEAGH 419 (452)
T ss_pred hhhChH-------------------HHHHHHhccCcccceeecCCCc-hhhhhHHhcCc
Confidence 999983 3455555 4568889999999 99999976544
|
|
| >PHA02884 ankyrin repeat protein; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.9e-20 Score=171.03 Aligned_cols=135 Identities=8% Similarity=0.001 Sum_probs=116.4
Q ss_pred CCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhc----CCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccC
Q 039985 102 ISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDC----TNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKD 177 (357)
Q Consensus 102 ~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~----~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~ 177 (357)
.++||.|+..|+.++++.|++.|++ .+.. +..|.| |||+|+..|+.+++++|+++|++++...
T Consensus 34 ~~lL~~A~~~~~~eivk~LL~~GAd-------iN~~~~~sd~~g~T-pLh~Aa~~~~~eivklLL~~GADVN~~~----- 100 (300)
T PHA02884 34 ANILYSSIKFHYTDIIDAILKLGAD-------PEAPFPLSENSKTN-PLIYAIDCDNDDAAKLLIRYGADVNRYA----- 100 (300)
T ss_pred CHHHHHHHHcCCHHHHHHHHHCCCC-------ccccCcccCCCCCC-HHHHHHHcCCHHHHHHHHHcCCCcCccc-----
Confidence 4568888888999999999999998 5554 468999 9999999999999999999999988211
Q ss_pred CCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCC
Q 039985 178 KNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGY 257 (357)
Q Consensus 178 ~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~ 257 (357)
+..|.||||+|+..|+.+++++|+++|+++. .+|..|+||||+|+..++.+++.++. + +..+..+.
T Consensus 101 -~~~g~TpLh~Aa~~~~~eivklLL~~GAdin---~kd~~G~TpL~~A~~~~~~~~~~~~~-------~---~~~~~~~~ 166 (300)
T PHA02884 101 -EEAKITPLYISVLHGCLKCLEILLSYGADIN---IQTNDMVTPIELALMICNNFLAFMIC-------D---NEISNFYK 166 (300)
T ss_pred -CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC---CCCCCCCCHHHHHHHhCChhHHHHhc-------C---Cccccccc
Confidence 2348999999999999999999999999999 89999999999999999998886662 2 23577788
Q ss_pred cHHHHH
Q 039985 258 TLLHHV 263 (357)
Q Consensus 258 TpLh~A 263 (357)
+|++++
T Consensus 167 ~~~~~~ 172 (300)
T PHA02884 167 HPKKIL 172 (300)
T ss_pred Chhhhh
Confidence 998865
|
|
| >PHA02736 Viral ankyrin protein; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=4.6e-21 Score=161.83 Aligned_cols=125 Identities=10% Similarity=0.019 Sum_probs=100.5
Q ss_pred hhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCcCcchHHHHHHHCCCHH---HHHHHHhhCCCccc
Q 039985 134 KKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNWAIRLTLLFAASNGITE---ILKEIIHQHPQAIL 210 (357)
Q Consensus 134 ~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~G~TpLh~Aa~~G~~~---iv~~Ll~~~~~~~~ 210 (357)
.+..|.+|.| |||+|+..|+ ++++++..+............+|..|.||||+|+..|+.+ ++++|++.|++++
T Consensus 10 ~~~~d~~g~t-pLh~A~~~g~--~~~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin- 85 (154)
T PHA02736 10 ASEPDIEGEN-ILHYLCRNGG--VTDLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGADIN- 85 (154)
T ss_pred HHhcCCCCCC-HHHHHHHhCC--HHHHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHcCCCcc-
Confidence 5668899999 9999999998 4455544433222100001134566999999999999874 6889999999998
Q ss_pred ccccC-CCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcHHHHHHHcCC
Q 039985 211 LDNLN-EKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTLLHHVADMKH 268 (357)
Q Consensus 211 ~~~~d-~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~ 268 (357)
.+| ..|+||||+|+..|+.+++++|+.. .+.+++.+|..|.||||+|+..|+
T Consensus 86 --~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~----~g~d~n~~~~~g~tpL~~A~~~~~ 138 (154)
T PHA02736 86 --GKERVFGNTPLHIAVYTQNYELATWLCNQ----PGVNMEILNYAFKTPYYVACERHD 138 (154)
T ss_pred --ccCCCCCCcHHHHHHHhCCHHHHHHHHhC----CCCCCccccCCCCCHHHHHHHcCC
Confidence 787 5999999999999999999999864 467899999999999999999987
|
|
| >PHA02730 ankyrin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.2e-19 Score=180.22 Aligned_cols=182 Identities=12% Similarity=0.032 Sum_probs=139.2
Q ss_pred CCCCCCHHHHHHhcC---CHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcC--cHHHHHHHHHcCCCCCCCC
Q 039985 98 SPANISTISLGLGKG---NMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFS--AAELVELFVKKDCTIKGVP 172 (357)
Q Consensus 98 ~~~g~t~Lh~A~~~g---~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g--~~~iv~~Ll~~g~~~~~~~ 172 (357)
+..|.||||+|+..| +.++|++|++.|++ .+..|..|.| |||+|+..+ +.++|++|+++|++.+.-
T Consensus 38 d~~G~TaLh~A~~~~~~~~~eivklLLs~GAd-------in~kD~~G~T-PLh~Aa~~~~~~~eIv~~Ll~~~~~~~~~- 108 (672)
T PHA02730 38 DRRGNNALHCYVSNKCDTDIKIVRLLLSRGVE-------RLCRNNEGLT-PLGVYSKRKYVKSQIVHLLISSYSNASNE- 108 (672)
T ss_pred CCCCCcHHHHHHHcCCcCcHHHHHHHHhCCCC-------CcccCCCCCC-hHHHHHHcCCCcHHHHHHHHhcCCCCCcc-
Confidence 445999999999997 59999999999999 7889999999 999999976 799999999997754211
Q ss_pred CCccCCCcCcchHHHHHHH--CCCHHHHHHHHh-hCCCcccccccC-----CCCChHHHHHHHcCCHHHHHHHHhhhccC
Q 039985 173 NHKKDKNWAIRLTLLFAAS--NGITEILKEIIH-QHPQAILLDNLN-----EKEQNILHVAVKRRQYKVFELITKEMQLS 244 (357)
Q Consensus 173 ~~~~~~~~~G~TpLh~Aa~--~G~~~iv~~Ll~-~~~~~~~~~~~d-----~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~ 244 (357)
..+..+.+|||.++. +++.++|++|++ .+.++. ... ..|.+|+++|+..+++++|++|+.
T Consensus 109 ----~~~~~~d~~l~~y~~s~n~~~~~vk~Li~~~~~~~~---~~~~~~~~~~~~~~~yl~~~~~~~eIvklLi~----- 176 (672)
T PHA02730 109 ----LTSNINDFDLYSYMSSDNIDLRLLKYLIVDKRIRPS---KNTNYYIHCLGLVDIYVTTPNPRPEVLLWLLK----- 176 (672)
T ss_pred ----cccccCCchHHHHHHhcCCcHHHHHHHHHhcCCChh---hhhhhhccccchhhhhHhcCCCchHHHHHHHH-----
Confidence 223336899998888 999999999997 556765 332 389999999999999999999998
Q ss_pred Cccccc-------cccCCCC-cHHHHHHHcCCCCCCCCCCChhHHHHHhhhHHHHHHhc-cCcccccccccCCCCHHHH
Q 039985 245 VPKWAS-------RIDKKGY-TLLHHVADMKHYKEGTRPGPVLQFQEELQLFEHVKEIM-PRHYAMHRDEKNKMTASDL 314 (357)
Q Consensus 245 ~~~~~~-------~~d~~G~-TpLh~Aa~~g~~~~~~~~~t~L~la~~l~~~~~v~~ll-~~~~~~~~n~~g~~Tp~dl 314 (357)
.|+.++ ..|..+. |.||++...... ..-...+.++.++ .+++++.+|++|+ ||++.
T Consensus 177 ~g~~v~g~~~~~~~~~~~~c~~~l~~~il~~~~-------------~~~n~~eiv~lLIs~GadIN~kd~~G~-TpLh~ 241 (672)
T PHA02730 177 SECYSTGYVFRSCMYDSDRCKNSLHYYILSHRE-------------SESLSKDVIKCLIDNNVSIHGRDEGGS-LPIQY 241 (672)
T ss_pred cCCcccccccccccccCCccchhHHHHHHhhhh-------------hhccCHHHHHHHHHCCCCCCCCCCCCC-CHHHH
Confidence 566663 2444444 556656554321 1112344555555 3458899999999 99985
|
|
| >KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.1e-20 Score=176.48 Aligned_cols=156 Identities=17% Similarity=0.128 Sum_probs=139.1
Q ss_pred CCCCCCCCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCC
Q 039985 94 SSTTSPANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPN 173 (357)
Q Consensus 94 ~~~~~~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~ 173 (357)
.+..++.|.|+||.+|...|.++|++|++.+++ ++..|..|+| |||.|+..||..++++|+.+|+++..+..
T Consensus 66 ~~~~n~DglTalhq~~id~~~e~v~~l~e~ga~-------Vn~~d~e~wt-Plhaaascg~~~i~~~li~~gA~~~avNs 137 (527)
T KOG0505|consen 66 PNLCNVDGLTALHQACIDDNLEMVKFLVENGAN-------VNAQDNEGWT-PLHAAASCGYLNIVEYLIQHGANLLAVNS 137 (527)
T ss_pred ccccCCccchhHHHHHhcccHHHHHHHHHhcCC-------ccccccccCC-cchhhcccccHHHHHHHHHhhhhhhhccC
Confidence 366778899999999999999999999999999 8899999999 99999999999999999999984432221
Q ss_pred Ccc----------------------------------------------------CCCcCcchHHHHHHHCCCHHHHHHH
Q 039985 174 HKK----------------------------------------------------DKNWAIRLTLLFAASNGITEILKEI 201 (357)
Q Consensus 174 ~~~----------------------------------------------------~~~~~G~TpLh~Aa~~G~~~iv~~L 201 (357)
..+ ..+..|.|.||.|+.+|..++.++|
T Consensus 138 dg~~P~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~~G~~~d~~~~rG~T~lHvAaa~Gy~e~~~lL 217 (527)
T KOG0505|consen 138 DGNMPYDLAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLNAGAELDARHARGATALHVAAANGYTEVAALL 217 (527)
T ss_pred CCCCccccccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHhccccccccccccchHHHHHHhhhHHHHHHHH
Confidence 111 2234599999999999999999999
Q ss_pred HhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcHHHHHHH
Q 039985 202 IHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTLLHHVAD 265 (357)
Q Consensus 202 l~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~ 265 (357)
+++|.++. .+|.+||||||.|+..|+.+++++|+. .+++++.....|.|||.+|..
T Consensus 218 l~ag~~~~---~~D~dgWtPlHAAA~Wg~~~~~elL~~-----~ga~~d~~t~~g~~p~dv~de 273 (527)
T KOG0505|consen 218 LQAGYSVN---IKDYDGWTPLHAAAHWGQEDACELLVE-----HGADMDAKTKMGETPLDVADE 273 (527)
T ss_pred HHhccCcc---cccccCCCcccHHHHhhhHhHHHHHHH-----hhcccchhhhcCCCCccchhh
Confidence 99999998 999999999999999999999998877 688999999999999999875
|
|
| >KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.5e-20 Score=163.78 Aligned_cols=133 Identities=17% Similarity=0.213 Sum_probs=116.0
Q ss_pred HhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCcCcchHHHH
Q 039985 109 LGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNWAIRLTLLF 188 (357)
Q Consensus 109 ~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~G~TpLh~ 188 (357)
|+.||.--|++-++....+ .+.-|+.|.+ |||+|+..|+..+|+.||.+|+.++ ..|....||||+
T Consensus 8 cregna~qvrlwld~tehd------ln~gddhgfs-plhwaakegh~aivemll~rgarvn-------~tnmgddtplhl 73 (448)
T KOG0195|consen 8 CREGNAFQVRLWLDDTEHD------LNVGDDHGFS-PLHWAAKEGHVAIVEMLLSRGARVN-------STNMGDDTPLHL 73 (448)
T ss_pred hhcCCeEEEEEEecCcccc------cccccccCcc-hhhhhhhcccHHHHHHHHhcccccc-------cccCCCCcchhh
Confidence 5666655555555544432 4567899999 9999999999999999999999988 455556899999
Q ss_pred HHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcHHHHH
Q 039985 189 AASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTLLHHV 263 (357)
Q Consensus 189 Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLh~A 263 (357)
||..||-+||+.|++..+|++ .++..|+|||||||..|.-.+++-|+. .|+.++..+++|.|||.-|
T Consensus 74 aaahghrdivqkll~~kadvn---avnehgntplhyacfwgydqiaedli~-----~ga~v~icnk~g~tpldka 140 (448)
T KOG0195|consen 74 AAAHGHRDIVQKLLSRKADVN---AVNEHGNTPLHYACFWGYDQIAEDLIS-----CGAAVNICNKKGMTPLDKA 140 (448)
T ss_pred hhhcccHHHHHHHHHHhcccc---hhhccCCCchhhhhhhcHHHHHHHHHh-----ccceeeecccCCCCchhhh
Confidence 999999999999999999999 999999999999999999999999988 7899999999999999866
|
|
| >KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.4e-19 Score=157.54 Aligned_cols=120 Identities=14% Similarity=0.096 Sum_probs=103.5
Q ss_pred CCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCC
Q 039985 177 DKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKG 256 (357)
Q Consensus 177 ~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G 256 (357)
.-|+.|++||||||+.||..+|+.|+.+|+.++ ..+.-..||||+|+.+||.++|+.|++ ..+++|+.+..|
T Consensus 29 ~gddhgfsplhwaakegh~aivemll~rgarvn---~tnmgddtplhlaaahghrdivqkll~-----~kadvnavnehg 100 (448)
T KOG0195|consen 29 VGDDHGFSPLHWAAKEGHVAIVEMLLSRGARVN---STNMGDDTPLHLAAAHGHRDIVQKLLS-----RKADVNAVNEHG 100 (448)
T ss_pred cccccCcchhhhhhhcccHHHHHHHHhcccccc---cccCCCCcchhhhhhcccHHHHHHHHH-----HhcccchhhccC
Confidence 456679999999999999999999999999999 899999999999999999999999998 688999999999
Q ss_pred CcHHHHHHHcCCCCCCCCCCChhHHHHHhhhHHHHHHhcc-CcccccccccCCCCHHHHHhhhhHHHHH
Q 039985 257 YTLLHHVADMKHYKEGTRPGPVLQFQEELQLFEHVKEIMP-RHYAMHRDEKNKMTASDLFNLTHEDQLR 324 (357)
Q Consensus 257 ~TpLh~Aa~~g~~~~~~~~~t~L~la~~l~~~~~v~~ll~-~~~~~~~n~~g~~Tp~dl~~~~~~~~~~ 324 (357)
+|||||||..|. ....+.++. ++.+.+.|++|. ||+|.++..-+..+.
T Consensus 101 ntplhyacfwgy-------------------dqiaedli~~ga~v~icnk~g~-tpldkakp~l~~~l~ 149 (448)
T KOG0195|consen 101 NTPLHYACFWGY-------------------DQIAEDLISCGAAVNICNKKGM-TPLDKAKPMLKNTLL 149 (448)
T ss_pred CCchhhhhhhcH-------------------HHHHHHHHhccceeeecccCCC-CchhhhchHHHHHHH
Confidence 999999999994 234455553 447889999999 999998765544433
|
|
| >TIGR00870 trp transient-receptor-potential calcium channel protein | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.5e-18 Score=181.53 Aligned_cols=175 Identities=13% Similarity=0.104 Sum_probs=133.2
Q ss_pred CCCCHHHHHHhcCCHHHHHHHHhc--CcchhHHHhhhhhcCCCCCcHHHH-HHHhcCcHHHHHHHHHcCCCCCCCCCCcc
Q 039985 100 ANISTISLGLGKGNMLKAKKLVDF--SAGELDELLLKKDCTNKGNMIKAK-KFVDFSAAELVELFVKKDCTIKGVPNHKK 176 (357)
Q Consensus 100 ~g~t~Lh~A~~~g~~~~vk~Ll~~--~~~~~~~~l~~~~~~~~g~t~pLh-~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~ 176 (357)
.+..+|+.|++.|+.+.++.+++. +.+ .+..|..|.| ||| .|+..++.+++++|+++|+
T Consensus 16 ~~~~~~l~A~~~g~~~~v~~lL~~~~~~~-------in~~d~~G~t-~Lh~~A~~~~~~eiv~lLl~~g~---------- 77 (743)
T TIGR00870 16 DEEKAFLPAAERGDLASVYRDLEEPKKLN-------INCPDRLGRS-ALFVAAIENENLELTELLLNLSC---------- 77 (743)
T ss_pred HHHHHHHHHHHcCCHHHHHHHhccccccC-------CCCcCccchh-HHHHHHHhcChHHHHHHHHhCCC----------
Confidence 367899999999999999999998 444 6678899999 999 8999999999999999987
Q ss_pred CCCcCcchHHHHHHHCC---CHHHHHHHHhhCCCc------c-cccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCc
Q 039985 177 DKNWAIRLTLLFAASNG---ITEILKEIIHQHPQA------I-LLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVP 246 (357)
Q Consensus 177 ~~~~~G~TpLh~Aa~~G---~~~iv~~Ll~~~~~~------~-~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~ 246 (357)
++..|.||||.|+..+ ...++..+...+++. + .....+..|.||||+||.+|+.++|++|++ .|
T Consensus 78 -~~~~G~T~Lh~A~~~~~~~v~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~-----~G 151 (743)
T TIGR00870 78 -RGAVGDTLLHAISLEYVDAVEAILLHLLAAFRKSGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLE-----RG 151 (743)
T ss_pred -CCCcChHHHHHHHhccHHHHHHHHHHHhhcccccCchhhhccccccccCCCCcHHHHHHHhCCHHHHHHHHh-----CC
Confidence 1123899999999722 233444444444321 1 001234579999999999999999999998 56
Q ss_pred ccccccc--------------CCCCcHHHHHHHcCCCCCCCCCCChhHHHHHhhhHHHHHHhc-cCcccccccccCCCCH
Q 039985 247 KWASRID--------------KKGYTLLHHVADMKHYKEGTRPGPVLQFQEELQLFEHVKEIM-PRHYAMHRDEKNKMTA 311 (357)
Q Consensus 247 ~~~~~~d--------------~~G~TpLh~Aa~~g~~~~~~~~~t~L~la~~l~~~~~v~~ll-~~~~~~~~n~~g~~Tp 311 (357)
++++.++ ..|.||||+|+..|+. +.++.++ .+++.+.+|+.|. ||
T Consensus 152 Adv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~-------------------~iv~lLl~~gadin~~d~~g~-T~ 211 (743)
T TIGR00870 152 ASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSP-------------------SIVALLSEDPADILTADSLGN-TL 211 (743)
T ss_pred CCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCH-------------------HHHHHHhcCCcchhhHhhhhh-HH
Confidence 7777553 3588999999988863 3455555 3447888999999 99
Q ss_pred HHHHhhh
Q 039985 312 SDLFNLT 318 (357)
Q Consensus 312 ~dl~~~~ 318 (357)
++++...
T Consensus 212 Lh~A~~~ 218 (743)
T TIGR00870 212 LHLLVME 218 (743)
T ss_pred HHHHHhh
Confidence 9998765
|
after chronic exposure to capsaicin. (McCleskey and Gold, 1999). |
| >PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain | Back alignment and domain information |
|---|
Probab=99.76 E-value=5.8e-18 Score=129.20 Aligned_cols=89 Identities=17% Similarity=0.213 Sum_probs=80.5
Q ss_pred HHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHH
Q 039985 146 AKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVA 225 (357)
Q Consensus 146 Lh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A 225 (357)
||+|+..|+.+++++|++.+.+++ . |.||||+||..|+.+++++|+++|+++. .+|..|+||||+|
T Consensus 1 L~~A~~~~~~~~~~~ll~~~~~~~-------~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~---~~~~~g~t~L~~A 66 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEKGADIN-------L----GNTALHYAAENGNLEIVKLLLENGADIN---SQDKNGNTALHYA 66 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHTTSTTT-------S----SSBHHHHHHHTTTHHHHHHHHHTTTCTT----BSTTSSBHHHHH
T ss_pred CHHHHHcCCHHHHHHHHHCcCCCC-------C----CCCHHHHHHHcCCHHHHHHHHHhccccc---ccCCCCCCHHHHH
Confidence 799999999999999999998776 2 7899999999999999999999999998 9999999999999
Q ss_pred HHcCCHHHHHHHHhhhccCCcccccccc
Q 039985 226 VKRRQYKVFELITKEMQLSVPKWASRID 253 (357)
Q Consensus 226 ~~~g~~~iv~~Ll~~~~~~~~~~~~~~d 253 (357)
+.+|+.+++++|++ .+.+++.+|
T Consensus 67 ~~~~~~~~~~~Ll~-----~g~~~~~~n 89 (89)
T PF12796_consen 67 AENGNLEIVKLLLE-----HGADVNIRN 89 (89)
T ss_dssp HHTTHHHHHHHHHH-----TTT-TTSS-
T ss_pred HHcCCHHHHHHHHH-----cCCCCCCcC
Confidence 99999999999998 677887765
|
These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B .... |
| >KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.75 E-value=4.4e-18 Score=167.24 Aligned_cols=196 Identities=15% Similarity=0.031 Sum_probs=158.8
Q ss_pred CHHHHHHhcCCHHHHHHHHhcCcchhHH------HhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCcc
Q 039985 103 STISLGLGKGNMLKAKKLVDFSAGELDE------LLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKK 176 (357)
Q Consensus 103 t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~------~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~ 176 (357)
+-|-.|+..|+.+.+.+||+.....--- .-..+..|-+|.| .||.|+.+|+.+++++|+++.+-++
T Consensus 5 qel~~a~ka~d~~tva~ll~~~~~r~~~l~~~trsds~n~qd~~gfT-alhha~Lng~~~is~llle~ea~ld------- 76 (854)
T KOG0507|consen 5 QELIDACKAGDYDTVALLLSSKKGRSGLLFFTTRSDSHNLQDYSGFT-LLHHAVLNGQNQISKLLLDYEALLD------- 76 (854)
T ss_pred hhHHHhhhcccHHHHHHhccCCCCCCCCCCCCCCCccccccCccchh-HHHHHHhcCchHHHHHHhcchhhhh-------
Confidence 4577899999999999999865430000 0012346779999 9999999999999999999988776
Q ss_pred CCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCC
Q 039985 177 DKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKG 256 (357)
Q Consensus 177 ~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G 256 (357)
..+.+|.+|||+||+.|+.++|++|+.++...+ ..+..|.||||.||+.||.++|.+||+ .+++.-.+|+.+
T Consensus 77 l~d~kg~~plhlaaw~g~~e~vkmll~q~d~~n---a~~~e~~tplhlaaqhgh~dvv~~Ll~-----~~adp~i~nns~ 148 (854)
T KOG0507|consen 77 LCDTKGILPLHLAAWNGNLEIVKMLLLQTDILN---AVNIENETPLHLAAQHGHLEVVFYLLK-----KNADPFIRNNSK 148 (854)
T ss_pred hhhccCcceEEehhhcCcchHHHHHHhcccCCC---cccccCcCccchhhhhcchHHHHHHHh-----cCCCccccCccc
Confidence 344559999999999999999999999996666 999999999999999999999999998 788888999999
Q ss_pred CcHHHHHHHcCCCCC----------------------CCCCCChhHHHHHhhhHHHHHHhccCc-ccccccccCCCCHHH
Q 039985 257 YTLLHHVADMKHYKE----------------------GTRPGPVLQFQEELQLFEHVKEIMPRH-YAMHRDEKNKMTASD 313 (357)
Q Consensus 257 ~TpLh~Aa~~g~~~~----------------------~~~~~t~L~la~~l~~~~~v~~ll~~~-~~~~~n~~g~~Tp~d 313 (357)
.|+|.+|++.|.... ....-++||++...+..++++.++... +++..-++| |+++
T Consensus 149 ~t~ldlA~qfgr~~Vvq~ll~~~~~~~~~~~~~~~~~~~~~~~plHlaakngh~~~~~~ll~ag~din~~t~~g--talh 226 (854)
T KOG0507|consen 149 ETVLDLASRFGRAEVVQMLLQKKFPVQSSLRVGDIKRPFPAIYPLHLAAKNGHVECMQALLEAGFDINYTTEDG--TALH 226 (854)
T ss_pred ccHHHHHHHhhhhHHHHHHhhhccchhhcccCCCCCCCCCCcCCcchhhhcchHHHHHHHHhcCCCcccccccc--hhhh
Confidence 999999999997541 011226889999888888888888544 666666666 6777
Q ss_pred HHh
Q 039985 314 LFN 316 (357)
Q Consensus 314 l~~ 316 (357)
-+.
T Consensus 227 eaa 229 (854)
T KOG0507|consen 227 EAA 229 (854)
T ss_pred hHh
Confidence 664
|
|
| >cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins | Back alignment and domain information |
|---|
Probab=99.74 E-value=5.8e-17 Score=129.85 Aligned_cols=122 Identities=19% Similarity=0.271 Sum_probs=110.1
Q ss_pred CCCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCC
Q 039985 99 PANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDK 178 (357)
Q Consensus 99 ~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~ 178 (357)
..|.||||.|+..|+.++++.|++.+.. ....+..|.+ |||+|+..+..+++++|++.++.++ ..
T Consensus 5 ~~g~t~l~~a~~~~~~~~i~~li~~~~~-------~~~~~~~g~~-~l~~a~~~~~~~~~~~ll~~~~~~~-------~~ 69 (126)
T cd00204 5 EDGRTPLHLAASNGHLEVVKLLLENGAD-------VNAKDNDGRT-PLHLAAKNGHLEIVKLLLEKGADVN-------AR 69 (126)
T ss_pred cCCCCHHHHHHHcCcHHHHHHHHHcCCC-------CCccCCCCCc-HHHHHHHcCCHHHHHHHHHcCCCcc-------cc
Confidence 4589999999999999999999999987 4678889999 9999999999999999999997665 34
Q ss_pred CcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHH
Q 039985 179 NWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELIT 238 (357)
Q Consensus 179 ~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll 238 (357)
+..|.||+|+|+..++.+++++|++++.+.. ..|..|.||||+|+..++.+++++|+
T Consensus 70 ~~~~~~~l~~a~~~~~~~~~~~L~~~~~~~~---~~~~~~~~~l~~~~~~~~~~~~~~Ll 126 (126)
T cd00204 70 DKDGNTPLHLAARNGNLDVVKLLLKHGADVN---ARDKDGRTPLHLAAKNGHLEVVKLLL 126 (126)
T ss_pred CCCCCCHHHHHHHcCcHHHHHHHHHcCCCCc---ccCCCCCCHHHHHHhcCCHHHHHHhC
Confidence 4558999999999999999999999998887 88899999999999999999999873
|
The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. |
| >KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.73 E-value=2e-18 Score=174.30 Aligned_cols=247 Identities=13% Similarity=0.055 Sum_probs=203.9
Q ss_pred cHHHHHHHHHhhhhc--ccCCCCCCCcCcCCCCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 039985 28 NANKLLKKLVKEETL--CLGDGEQNPEISLLSPESSSTS---LPNPEISSSNPESSTSSLPNPEIFSPDPESSTTSPANI 102 (357)
Q Consensus 28 ~~~~iv~~Ll~~~~~--~~d~~g~~p~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 102 (357)
...|+|++|+.+|++ .+|..|-+|++..++-.++..- +......+ .. .+..+.
T Consensus 768 gh~e~vellv~rganiehrdkkgf~plImaatagh~tvV~~llk~ha~ve-------------------aQ---sdrtkd 825 (2131)
T KOG4369|consen 768 GHREEVELLVVRGANIEHRDKKGFVPLIMAATAGHITVVQDLLKAHADVE-------------------AQ---SDRTKD 825 (2131)
T ss_pred ccHHHHHHHHHhcccccccccccchhhhhhcccCchHHHHHHHhhhhhhh-------------------hh---cccccC
Confidence 346899999999999 9999999999988777764321 11111111 11 122378
Q ss_pred CHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCcCc
Q 039985 103 STISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNWAI 182 (357)
Q Consensus 103 t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~G 182 (357)
|+|.+||..|..++|++||..++. ...++-...| ||-+|..-|.++++.+|+.+|+.++....+. .|
T Consensus 826 t~lSlacsggr~~vvelLl~~gan-------kehrnvsDyt-Plsla~Sggy~~iI~~llS~GseInSrtgSk-----lg 892 (2131)
T KOG4369|consen 826 TMLSLACSGGRTRVVELLLNAGAN-------KEHRNVSDYT-PLSLARSGGYTKIIHALLSSGSEINSRTGSK-----LG 892 (2131)
T ss_pred ceEEEecCCCcchHHHHHHHhhcc-------ccccchhhcC-chhhhcCcchHHHHHHHhhcccccccccccc-----cC
Confidence 999999999999999999999998 5556777888 9999999999999999999999988554433 38
Q ss_pred chHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcHHHH
Q 039985 183 RLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTLLHH 262 (357)
Q Consensus 183 ~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLh~ 262 (357)
-.||++|+.+||...++.|++.|.+++ -..-.+-+|+|-+|+..|+.++|.+||. ..+.+..+-+.|.|||+-
T Consensus 893 isPLmlatmngh~~at~~ll~~gsdiN--aqIeTNrnTaltla~fqgr~evv~lLLa-----~~anvehRaktgltplme 965 (2131)
T KOG4369|consen 893 ISPLMLATMNGHQAATLSLLQPGSDIN--AQIETNRNTALTLALFQGRPEVVFLLLA-----AQANVEHRAKTGLTPLME 965 (2131)
T ss_pred cchhhhhhhccccHHHHHHhcccchhc--cccccccccceeeccccCcchHHHHHHH-----HhhhhhhhcccCCcccch
Confidence 999999999999999999999999998 5566788999999999999999999987 678889999999999999
Q ss_pred HHHcCCCCC----------------CCCCCChhHHHHHhhhHHHHHHhccCc-ccccccccCCCCHHHHHhh
Q 039985 263 VADMKHYKE----------------GTRPGPVLQFQEELQLFEHVKEIMPRH-YAMHRDEKNKMTASDLFNL 317 (357)
Q Consensus 263 Aa~~g~~~~----------------~~~~~t~L~la~~l~~~~~v~~ll~~~-~~~~~n~~g~~Tp~dl~~~ 317 (357)
+|..|-.+. -+..+|+|-+...-++.+.|+.++.+. -...+|++|- |++-++..
T Consensus 966 ~AsgGyvdvg~~li~~gad~nasPvp~T~dtalti~a~kGh~kfv~~lln~~atv~v~NkkG~-T~Lwla~~ 1036 (2131)
T KOG4369|consen 966 MASGGYVDVGNLLIAAGADTNASPVPNTWDTALTIPANKGHTKFVPKLLNGDATVRVPNKKGC-TVLWLASA 1036 (2131)
T ss_pred hhcCCccccchhhhhcccccccCCCCCcCCccceeecCCCchhhhHHhhCCccceecccCCCC-cccchhcc
Confidence 999997552 234568888888888888899998654 6788999999 99988753
|
|
| >PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.8e-17 Score=125.40 Aligned_cols=86 Identities=22% Similarity=0.282 Sum_probs=77.5
Q ss_pred HHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCcCcch
Q 039985 105 ISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNWAIRL 184 (357)
Q Consensus 105 Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~G~T 184 (357)
||+||+.|+.++++.|++.+.. . +. |.| |||+|+..|+.+++++|+++|++++ .+|..|+|
T Consensus 1 L~~A~~~~~~~~~~~ll~~~~~-------~---~~-~~~-~l~~A~~~~~~~~~~~Ll~~g~~~~-------~~~~~g~t 61 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEKGAD-------I---NL-GNT-ALHYAAENGNLEIVKLLLENGADIN-------SQDKNGNT 61 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHTTST-------T---TS-SSB-HHHHHHHTTTHHHHHHHHHTTTCTT--------BSTTSSB
T ss_pred CHHHHHcCCHHHHHHHHHCcCC-------C---CC-CCC-HHHHHHHcCCHHHHHHHHHhccccc-------ccCCCCCC
Confidence 8999999999999999998776 2 22 889 9999999999999999999999987 55667999
Q ss_pred HHHHHHHCCCHHHHHHHHhhCCCcc
Q 039985 185 TLLFAASNGITEILKEIIHQHPQAI 209 (357)
Q Consensus 185 pLh~Aa~~G~~~iv~~Ll~~~~~~~ 209 (357)
|||+|+.+|+.+++++|+++|+++.
T Consensus 62 ~L~~A~~~~~~~~~~~Ll~~g~~~~ 86 (89)
T PF12796_consen 62 ALHYAAENGNLEIVKLLLEHGADVN 86 (89)
T ss_dssp HHHHHHHTTHHHHHHHHHHTTT-TT
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 9999999999999999999999987
|
These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B .... |
| >cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins | Back alignment and domain information |
|---|
Probab=99.71 E-value=2.8e-16 Score=125.82 Aligned_cols=116 Identities=24% Similarity=0.280 Sum_probs=105.7
Q ss_pred cCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCC
Q 039985 137 CTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNE 216 (357)
Q Consensus 137 ~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~ 216 (357)
.|.+|.| |||+|+..++.+++++|++.+.+.. .++..|.||||+|+..++.+++++|++.++... ..+.
T Consensus 3 ~~~~g~t-~l~~a~~~~~~~~i~~li~~~~~~~-------~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~---~~~~ 71 (126)
T cd00204 3 RDEDGRT-PLHLAASNGHLEVVKLLLENGADVN-------AKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVN---ARDK 71 (126)
T ss_pred cCcCCCC-HHHHHHHcCcHHHHHHHHHcCCCCC-------ccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcc---ccCC
Confidence 4678999 9999999999999999999998864 555569999999999999999999999998777 8889
Q ss_pred CCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcHHHHHHHcCC
Q 039985 217 KEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTLLHHVADMKH 268 (357)
Q Consensus 217 ~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~ 268 (357)
.|.||+|+|+..++.+++++|+. .+..++..|..|.||||+|...++
T Consensus 72 ~~~~~l~~a~~~~~~~~~~~L~~-----~~~~~~~~~~~~~~~l~~~~~~~~ 118 (126)
T cd00204 72 DGNTPLHLAARNGNLDVVKLLLK-----HGADVNARDKDGRTPLHLAAKNGH 118 (126)
T ss_pred CCCCHHHHHHHcCcHHHHHHHHH-----cCCCCcccCCCCCCHHHHHHhcCC
Confidence 99999999999999999999988 556788899999999999999875
|
The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. |
| >KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.2e-16 Score=158.84 Aligned_cols=166 Identities=15% Similarity=0.172 Sum_probs=135.2
Q ss_pred CCCCCCCCHHHHHHhc---CCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCC
Q 039985 96 TTSPANISTISLGLGK---GNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVP 172 (357)
Q Consensus 96 ~~~~~g~t~Lh~A~~~---g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~ 172 (357)
..+.-|.|.||.|..+ ++-++++.|++.-+.-+++.. ....-.|.| |||.|+.+.+.++|++|++.|||++.-.
T Consensus 138 ~RGa~GET~Lh~~lL~~~~~~n~la~~LL~~~p~lind~~--~~eeY~GqS-aLHiAIv~~~~~~V~lLl~~gADV~aRa 214 (782)
T KOG3676|consen 138 ERGATGETLLHKALLNLSDGHNELARVLLEIFPKLINDIY--TSEEYYGQS-ALHIAIVNRDAELVRLLLAAGADVHARA 214 (782)
T ss_pred cccchhhhHHHHHHhcCchhHHHHHHHHHHHhHHHhhhhh--hhHhhcCcc-hHHHHHHhccHHHHHHHHHcCCchhhHh
Confidence 3366799999999974 456999999999887444421 223457999 9999999999999999999999887432
Q ss_pred CCc----cCC------------CcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHH
Q 039985 173 NHK----KDK------------NWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFEL 236 (357)
Q Consensus 173 ~~~----~~~------------~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~ 236 (357)
... .++ -.-|+.||-+||..++.+|+++|+++|+|++ .+|.+|+|.||..+..-..++..+
T Consensus 215 ~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~~gAd~~---aqDS~GNTVLH~lVi~~~~~My~~ 291 (782)
T KOG3676|consen 215 CGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLAHGADPN---AQDSNGNTVLHMLVIHFVTEMYDL 291 (782)
T ss_pred hccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHhcCCCCC---ccccCCChHHHHHHHHHHHHHHHH
Confidence 110 011 1248899999999999999999999999999 999999999999999988999999
Q ss_pred HHhhhccCCccccccccCCCCcHHHHHHHcCCCC
Q 039985 237 ITKEMQLSVPKWASRIDKKGYTLLHHVADMKHYK 270 (357)
Q Consensus 237 Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~ 270 (357)
+|+..+ ......+|++|-|||-+||+.|+.+
T Consensus 292 ~L~~ga---~~l~~v~N~qgLTPLtLAaklGk~e 322 (782)
T KOG3676|consen 292 ALELGA---NALEHVRNNQGLTPLTLAAKLGKKE 322 (782)
T ss_pred HHhcCC---CccccccccCCCChHHHHHHhhhHH
Confidence 998422 1338889999999999999999743
|
|
| >PHA02792 ankyrin-like protein; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=2.9e-16 Score=156.38 Aligned_cols=137 Identities=15% Similarity=0.032 Sum_probs=116.4
Q ss_pred HHHHHHhcC--CHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCcC
Q 039985 104 TISLGLGKG--NMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNWA 181 (357)
Q Consensus 104 ~Lh~A~~~g--~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~ 181 (357)
.||.-..++ +.++++.|++.|.. .. ...... .++.|+..|+.++|++|+++|++++ .+|..
T Consensus 309 ~l~~Yl~~~~v~ieiIK~LId~Ga~-------~~--r~~~~n-~~~~Aa~~gn~eIVelLIs~GADIN-------~kD~~ 371 (631)
T PHA02792 309 LLSEYVSYHTVYINVIKCMIDEGAT-------LY--RFKHIN-KYFQKFDNRDPKVVEYILKNGNVVV-------EDDDN 371 (631)
T ss_pred HHHHHHhcCCccHHHHHHHHHCCCc-------cc--cCCcch-HHHHHHHcCCHHHHHHHHHcCCchh-------hhcCC
Confidence 467777777 68899999999987 11 122444 7999999999999999999999987 33333
Q ss_pred --cchHHHHHHHCCCH---HHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCC
Q 039985 182 --IRLTLLFAASNGIT---EILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKG 256 (357)
Q Consensus 182 --G~TpLh~Aa~~G~~---~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G 256 (357)
|.||||+|+..... +++++|+++|++++ .+|..|+||||+|+..++.+++++|++ .|++++.+|..|
T Consensus 372 g~~~TpLh~A~~n~~~~v~~IlklLIs~GADIN---~kD~~G~TPLh~Aa~~~n~eivelLLs-----~GADIN~kD~~G 443 (631)
T PHA02792 372 IINIMPLFPTLSIHESDVLSILKLCKPYIDDIN---KIDKHGRSILYYCIESHSVSLVEWLID-----NGADINITTKYG 443 (631)
T ss_pred CCChhHHHHHHHhccHhHHHHHHHHHhcCCccc---cccccCcchHHHHHHcCCHHHHHHHHH-----CCCCCCCcCCCC
Confidence 57999998877664 46889999999998 999999999999999999999999998 688999999999
Q ss_pred CcHHHHHHH
Q 039985 257 YTLLHHVAD 265 (357)
Q Consensus 257 ~TpLh~Aa~ 265 (357)
+||||+|+.
T Consensus 444 ~TpL~~A~~ 452 (631)
T PHA02792 444 STCIGICVI 452 (631)
T ss_pred CCHHHHHHH
Confidence 999999986
|
|
| >KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.63 E-value=2.2e-16 Score=159.74 Aligned_cols=192 Identities=15% Similarity=0.067 Sum_probs=166.0
Q ss_pred CCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCC
Q 039985 100 ANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKN 179 (357)
Q Consensus 100 ~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~ 179 (357)
.-.|+|-.||..||.|+|++|+..|++ ...+|+.|.+ ||.+|+..||..+|+.|+++.+++.... |
T Consensus 756 n~~t~LT~acaggh~e~vellv~rgan-------iehrdkkgf~-plImaatagh~tvV~~llk~ha~veaQs------d 821 (2131)
T KOG4369|consen 756 NIKTNLTSACAGGHREEVELLVVRGAN-------IEHRDKKGFV-PLIMAATAGHITVVQDLLKAHADVEAQS------D 821 (2131)
T ss_pred cccccccccccCccHHHHHHHHHhccc-------ccccccccch-hhhhhcccCchHHHHHHHhhhhhhhhhc------c
Confidence 356999999999999999999999998 7789999999 9999999999999999999999987433 3
Q ss_pred cCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccc--cCCCC
Q 039985 180 WAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRI--DKKGY 257 (357)
Q Consensus 180 ~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~--d~~G~ 257 (357)
..+.|+|-+||.-|..++|++||.+|++.. .++-...|||-+|...|..++|.+||+ .|..+|.+ .+-|-
T Consensus 822 rtkdt~lSlacsggr~~vvelLl~~ganke---hrnvsDytPlsla~Sggy~~iI~~llS-----~GseInSrtgSklgi 893 (2131)
T KOG4369|consen 822 RTKDTMLSLACSGGRTRVVELLLNAGANKE---HRNVSDYTPLSLARSGGYTKIIHALLS-----SGSEINSRTGSKLGI 893 (2131)
T ss_pred cccCceEEEecCCCcchHHHHHHHhhcccc---ccchhhcCchhhhcCcchHHHHHHHhh-----cccccccccccccCc
Confidence 348899999999999999999999999998 899999999999999999999999998 56667665 46799
Q ss_pred cHHHHHHHcCCCCC---------------CCCCCChhHHHHHhhhHHHHHHhccC-cccccccccCCCCHHHH
Q 039985 258 TLLHHVADMKHYKE---------------GTRPGPVLQFQEELQLFEHVKEIMPR-HYAMHRDEKNKMTASDL 314 (357)
Q Consensus 258 TpLh~Aa~~g~~~~---------------~~~~~t~L~la~~l~~~~~v~~ll~~-~~~~~~n~~g~~Tp~dl 314 (357)
.||++|+.+||... -..-.|+|-++...++.+.|..||.. ....+|-+-|. ||+--
T Consensus 894 sPLmlatmngh~~at~~ll~~gsdiNaqIeTNrnTaltla~fqgr~evv~lLLa~~anvehRaktgl-tplme 965 (2131)
T KOG4369|consen 894 SPLMLATMNGHQAATLSLLQPGSDINAQIETNRNTALTLALFQGRPEVVFLLLAAQANVEHRAKTGL-TPLME 965 (2131)
T ss_pred chhhhhhhccccHHHHHHhcccchhccccccccccceeeccccCcchHHHHHHHHhhhhhhhcccCC-cccch
Confidence 99999999998541 12234888888888888888777743 47888989998 88754
|
|
| >KOG4214 consensus Myotrophin and similar proteins [Transcription] | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.9e-15 Score=112.04 Aligned_cols=103 Identities=14% Similarity=0.195 Sum_probs=90.4
Q ss_pred CHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCcCc
Q 039985 103 STISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNWAI 182 (357)
Q Consensus 103 t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~G 182 (357)
--+.|++++|..+.||..+..+.+ .+..- .|++ |||+|+.+|+.+++++|+..|++++ ++|..|
T Consensus 4 ~~~~W~vkNG~~DeVk~~v~~g~n-------Vn~~~-ggR~-plhyAAD~GQl~ilefli~iGA~i~-------~kDKyg 67 (117)
T KOG4214|consen 4 MSVAWNVKNGEIDEVKQSVNEGLN-------VNEIY-GGRT-PLHYAADYGQLSILEFLISIGANIQ-------DKDKYG 67 (117)
T ss_pred hhHhhhhccCcHHHHHHHHHcccc-------HHHHh-CCcc-cchHhhhcchHHHHHHHHHhccccC-------CccccC
Confidence 457899999999999999988855 33333 7888 9999999999999999999999998 888889
Q ss_pred chHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHH
Q 039985 183 RLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHV 224 (357)
Q Consensus 183 ~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~ 224 (357)
-|||.-|...||.++|++||+.|++-. ..-.+|.+.+-.
T Consensus 68 ITPLLsAvwEGH~~cVklLL~~GAdrt---~~~PdG~~~~ea 106 (117)
T KOG4214|consen 68 ITPLLSAVWEGHRDCVKLLLQNGADRT---IHAPDGTALIEA 106 (117)
T ss_pred CcHHHHHHHHhhHHHHHHHHHcCcccc---eeCCCchhHHhh
Confidence 999999999999999999999999987 788888876544
|
|
| >COG0666 Arp FOG: Ankyrin repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.61 E-value=6.2e-15 Score=130.19 Aligned_cols=124 Identities=15% Similarity=0.136 Sum_probs=114.7
Q ss_pred CCCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCc-----HHHHHHHHHcCC--CCCCC
Q 039985 99 PANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSA-----AELVELFVKKDC--TIKGV 171 (357)
Q Consensus 99 ~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~-----~~iv~~Ll~~g~--~~~~~ 171 (357)
..+.+++|.++..++.++++.++..+.+ .+..+..|.| |||+|+..++ .+++++|++.|+ +...
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~-------~~~~~~~g~t-~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~- 141 (235)
T COG0666 71 LDGRLPLHSAASKGDDKIVKLLLASGAD-------VNAKDADGDT-PLHLAALNGNPPEGNIEVAKLLLEAGADLDVNN- 141 (235)
T ss_pred ccccCHHHHHHHcCcHHHHHHHHHcCCC-------cccccCCCCc-HHHHHHhcCCcccchHHHHHHHHHcCCCCCCcc-
Confidence 3478999999999999999999999998 7889999999 9999999999 999999999999 3331
Q ss_pred CCCccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHh
Q 039985 172 PNHKKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITK 239 (357)
Q Consensus 172 ~~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~ 239 (357)
.+|..|.||||+|+..|+.+++++|++.++++. .++..|.|+||+|+..++.+++..++.
T Consensus 142 -----~~~~~g~tpl~~A~~~~~~~~~~~ll~~~~~~~---~~~~~g~t~l~~a~~~~~~~~~~~l~~ 201 (235)
T COG0666 142 -----LRDEDGNTPLHWAALNGDADIVELLLEAGADPN---SRNSYGVTALDPAAKNGRIELVKLLLD 201 (235)
T ss_pred -----ccCCCCCchhHHHHHcCchHHHHHHHhcCCCCc---ccccCCCcchhhhcccchHHHHHHHHh
Confidence 456679999999999999999999999999998 889999999999999999999999977
|
|
| >COG0666 Arp FOG: Ankyrin repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.59 E-value=9.4e-15 Score=129.02 Aligned_cols=119 Identities=18% Similarity=0.168 Sum_probs=108.9
Q ss_pred hcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCcCcchHHHHHHHCCC-----HHHHHHHHhhCC--Cc
Q 039985 136 DCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNWAIRLTLLFAASNGI-----TEILKEIIHQHP--QA 208 (357)
Q Consensus 136 ~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~G~TpLh~Aa~~G~-----~~iv~~Ll~~~~--~~ 208 (357)
..+..+.+ ++|.++..+..+++++|+..|.+++ .++..|.||||+|+..|+ .+++++|++.|+ +.
T Consensus 68 ~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~-------~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~ 139 (235)
T COG0666 68 ARDLDGRL-PLHSAASKGDDKIVKLLLASGADVN-------AKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDV 139 (235)
T ss_pred cCCccccC-HHHHHHHcCcHHHHHHHHHcCCCcc-------cccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCC
Confidence 45666888 9999999999999999999999986 666679999999999999 999999999999 55
Q ss_pred ccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcHHHHHHHcCCC
Q 039985 209 ILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTLLHHVADMKHY 269 (357)
Q Consensus 209 ~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~ 269 (357)
. ..+|..|+||||+|+..|+.+++++|+. .+.+++..+..|.|+||+|+..++.
T Consensus 140 ~--~~~~~~g~tpl~~A~~~~~~~~~~~ll~-----~~~~~~~~~~~g~t~l~~a~~~~~~ 193 (235)
T COG0666 140 N--NLRDEDGNTPLHWAALNGDADIVELLLE-----AGADPNSRNSYGVTALDPAAKNGRI 193 (235)
T ss_pred c--cccCCCCCchhHHHHHcCchHHHHHHHh-----cCCCCcccccCCCcchhhhcccchH
Confidence 5 4789999999999999999999999988 6888999999999999999999974
|
|
| >KOG4214 consensus Myotrophin and similar proteins [Transcription] | Back alignment and domain information |
|---|
Probab=99.58 E-value=6.5e-15 Score=109.17 Aligned_cols=103 Identities=17% Similarity=0.093 Sum_probs=92.4
Q ss_pred HHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHH
Q 039985 145 KAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHV 224 (357)
Q Consensus 145 pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~ 224 (357)
...|++.+|..+-|+..+..|-+++.+.. |+||||+||-+|..+++++|+..|+++. ..|+.|-|||--
T Consensus 5 ~~~W~vkNG~~DeVk~~v~~g~nVn~~~g--------gR~plhyAAD~GQl~ilefli~iGA~i~---~kDKygITPLLs 73 (117)
T KOG4214|consen 5 SVAWNVKNGEIDEVKQSVNEGLNVNEIYG--------GRTPLHYAADYGQLSILEFLISIGANIQ---DKDKYGITPLLS 73 (117)
T ss_pred hHhhhhccCcHHHHHHHHHccccHHHHhC--------CcccchHhhhcchHHHHHHHHHhccccC---CccccCCcHHHH
Confidence 67899999999999999999988875443 8999999999999999999999999999 999999999999
Q ss_pred HHHcCCHHHHHHHHhhhccCCccccccccCCCCcHHHHH
Q 039985 225 AVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTLLHHV 263 (357)
Q Consensus 225 A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLh~A 263 (357)
|+..||.+||++||+ .+++...+-.+|.+.+..+
T Consensus 74 AvwEGH~~cVklLL~-----~GAdrt~~~PdG~~~~eat 107 (117)
T KOG4214|consen 74 AVWEGHRDCVKLLLQ-----NGADRTIHAPDGTALIEAT 107 (117)
T ss_pred HHHHhhHHHHHHHHH-----cCcccceeCCCchhHHhhc
Confidence 999999999999998 6777777878887775543
|
|
| >KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.1e-14 Score=145.03 Aligned_cols=191 Identities=13% Similarity=0.059 Sum_probs=138.5
Q ss_pred CHHHHHHhcCCHHHHHHHHhcCcchhHHH--hhhhhcCCCCCcHHHHHHHhc---CcHHHHHHHHHcCCCCCCCCCCccC
Q 039985 103 STISLGLGKGNMLKAKKLVDFSAGELDEL--LLKKDCTNKGNMIKAKKFVDF---SAAELVELFVKKDCTIKGVPNHKKD 177 (357)
Q Consensus 103 t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~--l~~~~~~~~g~t~pLh~A~~~---g~~~iv~~Ll~~g~~~~~~~~~~~~ 177 (357)
.++..|...|.+.....++......--.+ -..+.+..-|.| .||.|..+ ++-++++.|++.-+.+.+-... +
T Consensus 103 ~~~~~~~~~~~l~~l~~l~~~~~~~k~r~~~w~~~~RGa~GET-~Lh~~lL~~~~~~n~la~~LL~~~p~lind~~~--~ 179 (782)
T KOG3676|consen 103 DALFIADSEGALSDLDGLLKFLRKSKYRLTDWKLNERGATGET-LLHKALLNLSDGHNELARVLLEIFPKLINDIYT--S 179 (782)
T ss_pred hhhhhccccccHHHHhccchhhhhhhhhhhhhccccccchhhh-HHHHHHhcCchhHHHHHHHHHHHhHHHhhhhhh--h
Confidence 67888999999888888877764210000 012345677899 99999984 4669999999986653321111 4
Q ss_pred CCcCcchHHHHHHHCCCHHHHHHHHhhCCCcc------cccccC--------------CCCChHHHHHHHcCCHHHHHHH
Q 039985 178 KNWAIRLTLLFAASNGITEILKEIIHQHPQAI------LLDNLN--------------EKEQNILHVAVKRRQYKVFELI 237 (357)
Q Consensus 178 ~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~------~~~~~d--------------~~G~TpLh~A~~~g~~~iv~~L 237 (357)
....|.||||+|..+.+.++|++|++.|+|++ .+...| ..|..||-+||.-++.+|+++|
T Consensus 180 eeY~GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlL 259 (782)
T KOG3676|consen 180 EEYYGQSALHIAIVNRDAELVRLLLAAGADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLL 259 (782)
T ss_pred HhhcCcchHHHHHHhccHHHHHHHHHcCCchhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHH
Confidence 45569999999999999999999999999986 111222 2578999999999999999999
Q ss_pred HhhhccCCccccccccCCCCcHHHHHHHcCCCCCCCCCCChhHHHHHhhhHHHHHHhccCc--ccccccccCCCCHHHHH
Q 039985 238 TKEMQLSVPKWASRIDKKGYTLLHHVADMKHYKEGTRPGPVLQFQEELQLFEHVKEIMPRH--YAMHRDEKNKMTASDLF 315 (357)
Q Consensus 238 l~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~~~~~t~L~la~~l~~~~~v~~ll~~~--~~~~~n~~g~~Tp~dl~ 315 (357)
+. .+++++.+|..|||.||..+..-..+ | ++.+. ..+. ....+|++|. ||+.||
T Consensus 260 l~-----~gAd~~aqDS~GNTVLH~lVi~~~~~----------M------y~~~L--~~ga~~l~~v~N~qgL-TPLtLA 315 (782)
T KOG3676|consen 260 LA-----HGADPNAQDSNGNTVLHMLVIHFVTE----------M------YDLAL--ELGANALEHVRNNQGL-TPLTLA 315 (782)
T ss_pred Hh-----cCCCCCccccCCChHHHHHHHHHHHH----------H------HHHHH--hcCCCccccccccCCC-ChHHHH
Confidence 88 78999999999999999998763211 1 11110 0112 3667888998 999998
Q ss_pred hhhhH
Q 039985 316 NLTHE 320 (357)
Q Consensus 316 ~~~~~ 320 (357)
.+..+
T Consensus 316 aklGk 320 (782)
T KOG3676|consen 316 AKLGK 320 (782)
T ss_pred HHhhh
Confidence 76443
|
|
| >PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=2.3e-14 Score=147.40 Aligned_cols=111 Identities=13% Similarity=0.134 Sum_probs=98.9
Q ss_pred HHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHH
Q 039985 145 KAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHV 224 (357)
Q Consensus 145 pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~ 224 (357)
.|+.|+..|+.++|++|++.|++++ .+|..|.||||+||..|+.++|++|+++|++++ .+|..|+||||+
T Consensus 85 ~L~~aa~~G~~~~vk~LL~~Gadin-------~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn---~~d~~G~TpLh~ 154 (664)
T PTZ00322 85 ELCQLAASGDAVGARILLTGGADPN-------CRDYDGRTPLHIACANGHVQVVRVLLEFGADPT---LLDKDGKTPLEL 154 (664)
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCC-------CcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCC---CCCCCCCCHHHH
Confidence 6889999999999999999999987 566679999999999999999999999999998 999999999999
Q ss_pred HHHcCCHHHHHHHHhhhc--cCCccccccccCCCCcHHHHHHH
Q 039985 225 AVKRRQYKVFELITKEMQ--LSVPKWASRIDKKGYTLLHHVAD 265 (357)
Q Consensus 225 A~~~g~~~iv~~Ll~~~~--~~~~~~~~~~d~~G~TpLh~Aa~ 265 (357)
|+..|+.+++++|+.... ...+++.+..+..|.+|+..+..
T Consensus 155 A~~~g~~~iv~~Ll~~~~~~~~~ga~~~~~~~~g~~~~~~~~~ 197 (664)
T PTZ00322 155 AEENGFREVVQLLSRHSQCHFELGANAKPDSFTGKPPSLEDSP 197 (664)
T ss_pred HHHCCcHHHHHHHHhCCCcccccCCCCCccccCCCCccchhhh
Confidence 999999999999998411 12467888888889998887764
|
|
| >PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.9e-14 Score=99.15 Aligned_cols=54 Identities=24% Similarity=0.318 Sum_probs=45.9
Q ss_pred cchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHH
Q 039985 182 IRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELIT 238 (357)
Q Consensus 182 G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll 238 (357)
|+||||+||+.|+.+++++|+++|.+++ .+|.+|+||||+|+.+|+.+++++|+
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~din---~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGADIN---AQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTSGTT----B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCCCCC---CCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 6899999999999999999999999988 88999999999999999999999985
|
... |
| >KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.49 E-value=2.1e-13 Score=121.03 Aligned_cols=120 Identities=14% Similarity=0.146 Sum_probs=110.1
Q ss_pred CCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCcC
Q 039985 102 ISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNWA 181 (357)
Q Consensus 102 ~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~ 181 (357)
..+|..++..|+.+.+..||..-.. ++..|..|.+ +|..|+..|+.++|++||+.|++++. .++..
T Consensus 13 ~~~Lle~i~Kndt~~a~~LLs~vr~-------vn~~D~sGMs-~LahAaykGnl~~v~lll~~gaDvN~------~qhg~ 78 (396)
T KOG1710|consen 13 KSPLLEAIDKNDTEAALALLSTVRQ-------VNQRDPSGMS-VLAHAAYKGNLTLVELLLELGADVND------KQHGT 78 (396)
T ss_pred hhHHHHHHccCcHHHHHHHHHHhhh-------hhccCCCccc-HHHHHHhcCcHHHHHHHHHhCCCcCc------ccccc
Confidence 4799999999999999999987554 7789999999 99999999999999999999999983 34445
Q ss_pred cchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHH
Q 039985 182 IRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELIT 238 (357)
Q Consensus 182 G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll 238 (357)
+.||||+||-.|+.++.++|++.|+... ..|.-|+|+-..|+.-||.++|..+=
T Consensus 79 ~YTpLmFAALSGn~dvcrllldaGa~~~---~vNsvgrTAaqmAAFVG~H~CV~iIN 132 (396)
T KOG1710|consen 79 LYTPLMFAALSGNQDVCRLLLDAGARMY---LVNSVGRTAAQMAAFVGHHECVAIIN 132 (396)
T ss_pred cccHHHHHHHcCCchHHHHHHhccCccc---cccchhhhHHHHHHHhcchHHHHHHh
Confidence 8999999999999999999999999998 88999999999999999999998873
|
|
| >PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A | Back alignment and domain information |
|---|
Probab=99.48 E-value=3.1e-14 Score=98.76 Aligned_cols=55 Identities=16% Similarity=0.262 Sum_probs=31.7
Q ss_pred HHHcC-CCCCCCCCCccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHH
Q 039985 161 FVKKD-CTIKGVPNHKKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVA 225 (357)
Q Consensus 161 Ll~~g-~~~~~~~~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A 225 (357)
||++| .+++ .+|..|.||||+||.+|+.++|++|++.|+++. .+|.+|+||||+|
T Consensus 1 LL~~~~~~~n-------~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~---~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 1 LLEHGPADVN-------AQDKYGNTPLHWAARYGHSEVVRLLLQNGADPN---AKDKDGQTPLHYA 56 (56)
T ss_dssp -----T--TT----------TTS--HHHHHHHHT-HHHHHHHHHCT--TT------TTS--HHHH-
T ss_pred CCccCcCCCc-------CcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCC---CCcCCCCCHHHhC
Confidence 56666 5554 667779999999999999999999999999998 9999999999997
|
|
| >PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A | Back alignment and domain information |
|---|
Probab=99.47 E-value=5.2e-14 Score=97.67 Aligned_cols=55 Identities=20% Similarity=0.203 Sum_probs=32.1
Q ss_pred HHhhC-CCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcHHHHH
Q 039985 201 IIHQH-PQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTLLHHV 263 (357)
Q Consensus 201 Ll~~~-~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLh~A 263 (357)
||++| .+++ .+|..|.||||+||.+|+.+++++|+. .+.+++.+|.+|+||||+|
T Consensus 1 LL~~~~~~~n---~~d~~G~T~LH~A~~~g~~~~v~~Ll~-----~g~d~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 1 LLEHGPADVN---AQDKYGNTPLHWAARYGHSEVVRLLLQ-----NGADPNAKDKDGQTPLHYA 56 (56)
T ss_dssp -----T--TT------TTS--HHHHHHHHT-HHHHHHHHH-----CT--TT---TTS--HHHH-
T ss_pred CCccCcCCCc---CcCCCCCcHHHHHHHcCcHHHHHHHHH-----CcCCCCCCcCCCCCHHHhC
Confidence 67788 5555 999999999999999999999999995 7899999999999999998
|
|
| >KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.45 E-value=7.9e-13 Score=125.66 Aligned_cols=118 Identities=8% Similarity=0.040 Sum_probs=101.9
Q ss_pred HHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCcCcch
Q 039985 105 ISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNWAIRL 184 (357)
Q Consensus 105 Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~G~T 184 (357)
|.-|+..|.+++|+.++..-.+ ....|+.|-| +||-|+-.||.+||++|++.|++++ ..|.+|||
T Consensus 554 LLDaaLeGEldlVq~~i~ev~D-------pSqpNdEGIT-aLHNAiCaghyeIVkFLi~~ganVN-------a~DSdGWT 618 (752)
T KOG0515|consen 554 LLDAALEGELDLVQRIIYEVTD-------PSQPNDEGIT-ALHNAICAGHYEIVKFLIEFGANVN-------AADSDGWT 618 (752)
T ss_pred HHhhhhcchHHHHHHHHHhhcC-------CCCCCccchh-HHhhhhhcchhHHHHHHHhcCCccc-------CccCCCCc
Confidence 5678999999999999977666 6778999999 9999999999999999999999998 77778999
Q ss_pred HHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHH--HcCCHHHHHHHHh
Q 039985 185 TLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAV--KRRQYKVFELITK 239 (357)
Q Consensus 185 pLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~--~~g~~~iv~~Ll~ 239 (357)
|||+||...++.+++.|++.|+.+. -.+=.++.||.--+- +.|...|.+||..
T Consensus 619 PLHCAASCNnv~~ckqLVe~Gaavf--AsTlSDmeTa~eKCee~eeGY~~CsqyL~~ 673 (752)
T KOG0515|consen 619 PLHCAASCNNVPMCKQLVESGAAVF--ASTLSDMETAAEKCEEMEEGYDQCSQYLYG 673 (752)
T ss_pred hhhhhhhcCchHHHHHHHhccceEE--eeecccccchhhhcchhhhhHHHHHHHHHH
Confidence 9999999999999999999999988 455578888876543 4578889999954
|
|
| >PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=3.5e-13 Score=138.78 Aligned_cols=106 Identities=11% Similarity=0.030 Sum_probs=96.1
Q ss_pred CHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCcCc
Q 039985 103 STISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNWAI 182 (357)
Q Consensus 103 t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~G 182 (357)
..||.|+..|+.+.++.|++.+++ .+..|..|.| |||+|+..|+.++|++|+++|++++ .+|..|
T Consensus 84 ~~L~~aa~~G~~~~vk~LL~~Gad-------in~~d~~G~T-pLh~Aa~~g~~eiv~~LL~~Gadvn-------~~d~~G 148 (664)
T PTZ00322 84 VELCQLAASGDAVGARILLTGGAD-------PNCRDYDGRT-PLHIACANGHVQVVRVLLEFGADPT-------LLDKDG 148 (664)
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCC-------CCCcCCCCCc-HHHHHHHCCCHHHHHHHHHCCCCCC-------CCCCCC
Confidence 469999999999999999999998 7778999999 9999999999999999999999987 666679
Q ss_pred chHHHHHHHCCCHHHHHHHHhh-------CCCcccccccCCCCChHHHHHH
Q 039985 183 RLTLLFAASNGITEILKEIIHQ-------HPQAILLDNLNEKEQNILHVAV 226 (357)
Q Consensus 183 ~TpLh~Aa~~G~~~iv~~Ll~~-------~~~~~~~~~~d~~G~TpLh~A~ 226 (357)
.||||+|+..|+.+++++|+++ +++.. ..+..|.+|+..+.
T Consensus 149 ~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~ga~~~---~~~~~g~~~~~~~~ 196 (664)
T PTZ00322 149 KTPLELAEENGFREVVQLLSRHSQCHFELGANAK---PDSFTGKPPSLEDS 196 (664)
T ss_pred CCHHHHHHHCCcHHHHHHHHhCCCcccccCCCCC---ccccCCCCccchhh
Confidence 9999999999999999999999 77777 77888888776654
|
|
| >PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A | Back alignment and domain information |
|---|
Probab=99.43 E-value=4e-13 Score=92.49 Aligned_cols=54 Identities=24% Similarity=0.319 Sum_probs=45.0
Q ss_pred CCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCcCcchHHHHHHHCCCHHHHHHHH
Q 039985 141 GNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNWAIRLTLLFAASNGITEILKEII 202 (357)
Q Consensus 141 g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll 202 (357)
|.| |||+|+..|+.+++++|+++|.+++ .+|.+|+||||+|+..|+.+++++||
T Consensus 1 g~t-~lh~A~~~g~~~~~~~Ll~~~~din-------~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRT-PLHWAARSGNLEIVKLLLEHGADIN-------AQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SSB-HHHHHHHTT-HHHHHHHHHTTSGTT--------B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred CCh-HHHHHHHhCCHHHHHHHHHCCCCCC-------CCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 678 9999999999999999999999988 55667999999999999999999986
|
... |
| >KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.35 E-value=4.6e-12 Score=112.55 Aligned_cols=112 Identities=13% Similarity=0.065 Sum_probs=102.5
Q ss_pred HHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHH
Q 039985 145 KAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHV 224 (357)
Q Consensus 145 pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~ 224 (357)
||..+...|..+-...||+.-.+++ .+|..|+|||..|+..|+.++|++||+.|+|++ ..++..+.||||+
T Consensus 15 ~Lle~i~Kndt~~a~~LLs~vr~vn-------~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN--~~qhg~~YTpLmF 85 (396)
T KOG1710|consen 15 PLLEAIDKNDTEAALALLSTVRQVN-------QRDPSGMSVLAHAAYKGNLTLVELLLELGADVN--DKQHGTLYTPLMF 85 (396)
T ss_pred HHHHHHccCcHHHHHHHHHHhhhhh-------ccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcC--cccccccccHHHH
Confidence 9999999999999999998865555 566679999999999999999999999999999 8899999999999
Q ss_pred HHHcCCHHHHHHHHhhhccCCccccccccCCCCcHHHHHHHcCCCC
Q 039985 225 AVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTLLHHVADMKHYK 270 (357)
Q Consensus 225 A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~ 270 (357)
|+..|+.++.++|+. .|+.....+.-|+|+-.+||.-|+.+
T Consensus 86 AALSGn~dvcrllld-----aGa~~~~vNsvgrTAaqmAAFVG~H~ 126 (396)
T KOG1710|consen 86 AALSGNQDVCRLLLD-----AGARMYLVNSVGRTAAQMAAFVGHHE 126 (396)
T ss_pred HHHcCCchHHHHHHh-----ccCccccccchhhhHHHHHHHhcchH
Confidence 999999999999987 67888888999999999999999844
|
|
| >KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.33 E-value=3.3e-12 Score=121.47 Aligned_cols=103 Identities=14% Similarity=-0.034 Sum_probs=86.8
Q ss_pred HHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHH
Q 039985 145 KAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHV 224 (357)
Q Consensus 145 pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~ 224 (357)
-|.-|+..|-+++|+..+..-.+.. ..|+.|-||||-|+..||.+||++||+.|++++ ..|.+||||||+
T Consensus 553 LLLDaaLeGEldlVq~~i~ev~DpS-------qpNdEGITaLHNAiCaghyeIVkFLi~~ganVN---a~DSdGWTPLHC 622 (752)
T KOG0515|consen 553 LLLDAALEGELDLVQRIIYEVTDPS-------QPNDEGITALHNAICAGHYEIVKFLIEFGANVN---AADSDGWTPLHC 622 (752)
T ss_pred HHHhhhhcchHHHHHHHHHhhcCCC-------CCCccchhHHhhhhhcchhHHHHHHHhcCCccc---CccCCCCchhhh
Confidence 3455888999999999998866655 667779999999999999999999999999999 999999999999
Q ss_pred HHHcCCHHHHHHHHhhhccCCccccccccCCCCcHHH
Q 039985 225 AVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTLLH 261 (357)
Q Consensus 225 A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLh 261 (357)
|+..++..+++.|++. ..+.+-..=.++.||..
T Consensus 623 AASCNnv~~ckqLVe~----GaavfAsTlSDmeTa~e 655 (752)
T KOG0515|consen 623 AASCNNVPMCKQLVES----GAAVFASTLSDMETAAE 655 (752)
T ss_pred hhhcCchHHHHHHHhc----cceEEeeecccccchhh
Confidence 9999999999999984 23334444466777754
|
|
| >PF13606 Ank_3: Ankyrin repeat | Back alignment and domain information |
|---|
Probab=98.82 E-value=4.2e-09 Score=62.90 Aligned_cols=28 Identities=32% Similarity=0.322 Sum_probs=26.6
Q ss_pred cchHHHHHHHCCCHHHHHHHHhhCCCcc
Q 039985 182 IRLTLLFAASNGITEILKEIIHQHPQAI 209 (357)
Q Consensus 182 G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~ 209 (357)
|+||||+||+.|+.++|++||++|++++
T Consensus 2 G~T~Lh~A~~~g~~e~v~~Ll~~gadvn 29 (30)
T PF13606_consen 2 GNTPLHLAASNGNIEIVKYLLEHGADVN 29 (30)
T ss_pred CCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence 8999999999999999999999999875
|
|
| >KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown] | Back alignment and domain information |
|---|
Probab=98.81 E-value=2.3e-09 Score=107.10 Aligned_cols=82 Identities=18% Similarity=0.167 Sum_probs=76.1
Q ss_pred CCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCC-CCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCC
Q 039985 177 DKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNE-KEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKK 255 (357)
Q Consensus 177 ~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~-~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~ 255 (357)
.+|..|+|+||+|+..|..++++.||++|.++. .+|. .|+||||-|+.+|+.+++-+||+ .+..+..+|++
T Consensus 47 ikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~---vqD~ESG~taLHRaiyyG~idca~lLL~-----~g~SL~i~Dke 118 (1267)
T KOG0783|consen 47 IKDRYGRTALHIAVSENKNSFLRWLLQHGIDVF---VQDEESGYTALHRAIYYGNIDCASLLLS-----KGRSLRIKDKE 118 (1267)
T ss_pred HHHhhccceeeeeeccchhHHHHHHHhcCceee---eccccccchHhhHhhhhchHHHHHHHHh-----cCCceEEeccc
Confidence 566679999999999999999999999999999 8884 69999999999999999999998 78899999999
Q ss_pred CCcHHHHHHHc
Q 039985 256 GYTLLHHVADM 266 (357)
Q Consensus 256 G~TpLh~Aa~~ 266 (357)
|..||.+-++-
T Consensus 119 glsplq~~~r~ 129 (1267)
T KOG0783|consen 119 GLSPLQFLSRV 129 (1267)
T ss_pred CCCHHHHHhhc
Confidence 99999999873
|
|
| >KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.79 E-value=6e-08 Score=93.54 Aligned_cols=119 Identities=8% Similarity=-0.054 Sum_probs=96.8
Q ss_pred HHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCcCcch
Q 039985 105 ISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNWAIRL 184 (357)
Q Consensus 105 Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~G~T 184 (357)
|..|+..++..-+...-..|.+ .-.++.+-++ .||+|+..|+-+||+++|++|+.-. -+ ..+..|.|
T Consensus 870 il~av~~~D~~klqE~h~~gg~-------ll~~~~~~~s-llh~a~~tg~~eivkyildh~p~el--ld---~~de~get 936 (1004)
T KOG0782|consen 870 ILRAVLSSDLMKLQETHLNGGS-------LLIQGPDHCS-LLHYAAKTGNGEIVKYILDHGPSEL--LD---MADETGET 936 (1004)
T ss_pred HHHHHHhccHHHHHHHHhcCCc-------eEeeCcchhh-HHHHHHhcCChHHHHHHHhcCCHHH--HH---HHhhhhhH
Confidence 6677777776555555555555 2345667778 9999999999999999999998521 11 33455999
Q ss_pred HHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHh
Q 039985 185 TLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITK 239 (357)
Q Consensus 185 pLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~ 239 (357)
+||-||..++-.+.++|++.|+... .+|..|.||-.-|-+.|..+...||-+
T Consensus 937 ~lhkaa~~~~r~vc~~lvdagasl~---ktd~kg~tp~eraqqa~d~dlaayle~ 988 (1004)
T KOG0782|consen 937 ALHKAACQRNRAVCQLLVDAGASLR---KTDSKGKTPQERAQQAGDPDLAAYLES 988 (1004)
T ss_pred HHHHHHHhcchHHHHHHHhcchhhe---ecccCCCChHHHHHhcCCchHHHHHhh
Confidence 9999999999999999999999998 999999999999999999999999954
|
|
| >KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.78 E-value=6e-09 Score=98.47 Aligned_cols=91 Identities=16% Similarity=0.182 Sum_probs=74.0
Q ss_pred CCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCC
Q 039985 139 NKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKE 218 (357)
Q Consensus 139 ~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G 218 (357)
.++.. ++.+|+..|.+..++.+.-.|.++. .+|.+.+|+||.||..|+++++++|++...... +.+|..|
T Consensus 504 ~~~~i-~~~~aa~~GD~~alrRf~l~g~D~~-------~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~--~~kDRw~ 573 (622)
T KOG0506|consen 504 NDTVI-NVMYAAKNGDLSALRRFALQGMDLE-------TKDYDDRTALHVAAAEGHVEVVKFLLNACKVDP--DPKDRWG 573 (622)
T ss_pred ccchh-hhhhhhhcCCHHHHHHHHHhccccc-------ccccccchhheeecccCceeHHHHHHHHHcCCC--ChhhccC
Confidence 34444 8888999999888888888888887 556667899999999999999999888765544 4888899
Q ss_pred ChHHHHHHHcCCHHHHHHHHh
Q 039985 219 QNILHVAVKRRQYKVFELITK 239 (357)
Q Consensus 219 ~TpLh~A~~~g~~~iv~~Ll~ 239 (357)
+|||--|...+|.+++++|-+
T Consensus 574 rtPlDdA~~F~h~~v~k~L~~ 594 (622)
T KOG0506|consen 574 RTPLDDAKHFKHKEVVKLLEE 594 (622)
T ss_pred CCcchHhHhcCcHHHHHHHHH
Confidence 999999999999999888855
|
|
| >KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.76 E-value=2.2e-08 Score=96.51 Aligned_cols=112 Identities=21% Similarity=0.164 Sum_probs=93.0
Q ss_pred HHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHH
Q 039985 146 AKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVA 225 (357)
Q Consensus 146 Lh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A 225 (357)
+..|+..+..--.+.+-..|.++. .++.+.+|-||+|++.|+-+||+|||++||.-. ++..|..|.|+||-|
T Consensus 870 il~av~~~D~~klqE~h~~gg~ll-------~~~~~~~sllh~a~~tg~~eivkyildh~p~el-ld~~de~get~lhka 941 (1004)
T KOG0782|consen 870 ILRAVLSSDLMKLQETHLNGGSLL-------IQGPDHCSLLHYAAKTGNGEIVKYILDHGPSEL-LDMADETGETALHKA 941 (1004)
T ss_pred HHHHHHhccHHHHHHHHhcCCceE-------eeCcchhhHHHHHHhcCChHHHHHHHhcCCHHH-HHHHhhhhhHHHHHH
Confidence 455666666555555666676665 444457999999999999999999999998643 367899999999999
Q ss_pred HHcCCHHHHHHHHhhhccCCccccccccCCCCcHHHHHHHcCCCC
Q 039985 226 VKRRQYKVFELITKEMQLSVPKWASRIDKKGYTLLHHVADMKHYK 270 (357)
Q Consensus 226 ~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~ 270 (357)
+..++..++.+|+. .++.+...|..|.||-.-|-+.|+++
T Consensus 942 a~~~~r~vc~~lvd-----agasl~ktd~kg~tp~eraqqa~d~d 981 (1004)
T KOG0782|consen 942 ACQRNRAVCQLLVD-----AGASLRKTDSKGKTPQERAQQAGDPD 981 (1004)
T ss_pred HHhcchHHHHHHHh-----cchhheecccCCCChHHHHHhcCCch
Confidence 99999999999987 78899999999999999999999854
|
|
| >PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature | Back alignment and domain information |
|---|
Probab=98.76 E-value=1.2e-08 Score=62.41 Aligned_cols=31 Identities=19% Similarity=0.258 Sum_probs=29.1
Q ss_pred cchHHHHHHHCCCHHHHHHHHhhCCCcccccccC
Q 039985 182 IRLTLLFAASNGITEILKEIIHQHPQAILLDNLN 215 (357)
Q Consensus 182 G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d 215 (357)
|+||||+||..|+.+++++|+++|+++. .+|
T Consensus 2 G~TpLh~A~~~~~~~~v~~Ll~~ga~~~---~~d 32 (33)
T PF00023_consen 2 GNTPLHYAAQRGHPDIVKLLLKHGADIN---ARD 32 (33)
T ss_dssp SBBHHHHHHHTTCHHHHHHHHHTTSCTT---CBC
T ss_pred cccHHHHHHHHHHHHHHHHHHHCcCCCC---CCC
Confidence 8999999999999999999999999998 665
|
Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A .... |
| >KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown] | Back alignment and domain information |
|---|
Probab=98.75 E-value=9.2e-09 Score=102.97 Aligned_cols=102 Identities=9% Similarity=-0.012 Sum_probs=85.3
Q ss_pred CCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCcCcchHHHHHHH
Q 039985 112 GNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNWAIRLTLLFAAS 191 (357)
Q Consensus 112 g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~G~TpLh~Aa~ 191 (357)
|...-++-+++..+..+ ++..|..|++ +||+|+..+..++++.||++|.++...... .|+||||.|..
T Consensus 28 s~~Nqlk~F~~k~c~n~-----anikD~~GR~-alH~~~S~~k~~~l~wLlqhGidv~vqD~E------SG~taLHRaiy 95 (1267)
T KOG0783|consen 28 SEPNQLKGFSEKSCQNL-----ANIKDRYGRT-ALHIAVSENKNSFLRWLLQHGIDVFVQDEE------SGYTALHRAIY 95 (1267)
T ss_pred CChhHHHHHHHHhhhhh-----hhHHHhhccc-eeeeeeccchhHHHHHHHhcCceeeecccc------ccchHhhHhhh
Confidence 33333566666655522 6778999999 999999999999999999999998833222 39999999999
Q ss_pred CCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHc
Q 039985 192 NGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKR 228 (357)
Q Consensus 192 ~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~ 228 (357)
+||++++-.||++|.... .+|++|..||..-++-
T Consensus 96 yG~idca~lLL~~g~SL~---i~Dkeglsplq~~~r~ 129 (1267)
T KOG0783|consen 96 YGNIDCASLLLSKGRSLR---IKDKEGLSPLQFLSRV 129 (1267)
T ss_pred hchHHHHHHHHhcCCceE---EecccCCCHHHHHhhc
Confidence 999999999999999887 9999999999987764
|
|
| >KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.72 E-value=5.1e-08 Score=92.72 Aligned_cols=86 Identities=9% Similarity=-0.054 Sum_probs=78.8
Q ss_pred HHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHH
Q 039985 145 KAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHV 224 (357)
Q Consensus 145 pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~ 224 (357)
-||..++.|+.++.-.||..|++.+..... .|.||||.||+.|+.--+++|+-.|+|+. ..|.+|+||+-+
T Consensus 136 QLhasvRt~nlet~LRll~lGA~~N~~hpe------kg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~---a~d~~GmtP~~~ 206 (669)
T KOG0818|consen 136 QLHSSVRTGNLETCLRLLSLGAQANFFHPE------KGNTPLHVAAKAGQILQAELLAVYGADPG---AQDSSGMTPVDY 206 (669)
T ss_pred HHHHHhhcccHHHHHHHHHcccccCCCCcc------cCCchhHHHHhccchhhhhHHhhccCCCC---CCCCCCCcHHHH
Confidence 689999999999999999999998844332 39999999999999999999999999999 999999999999
Q ss_pred HHHcCCHHHHHHHHh
Q 039985 225 AVKRRQYKVFELITK 239 (357)
Q Consensus 225 A~~~g~~~iv~~Ll~ 239 (357)
|-..||-++.+-|++
T Consensus 207 AR~~gH~~laeRl~e 221 (669)
T KOG0818|consen 207 ARQGGHHELAERLVE 221 (669)
T ss_pred HHhcCchHHHHHHHH
Confidence 999999998888866
|
|
| >KOG0522 consensus Ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.69 E-value=4.4e-08 Score=94.10 Aligned_cols=88 Identities=14% Similarity=0.085 Sum_probs=72.6
Q ss_pred HHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHH
Q 039985 145 KAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHV 224 (357)
Q Consensus 145 pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~ 224 (357)
|||+++.....+-.+.++....... .+ .+|..|.||||+|+..||.+.++.|+.+|+++. .+|.+||+|||.
T Consensus 23 ~lh~~~~~~~~~sl~~el~~~~~~~--id---~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~---~kN~~gWs~L~E 94 (560)
T KOG0522|consen 23 PLHWAVVTTDSDSLEQELLAKVSLV--ID---RRDPPGRTPLHLAVRLGHVEAARILLSAGADVS---IKNNEGWSPLHE 94 (560)
T ss_pred ccchhhhccchhhHHHHHhhhhhce--ec---cccCCCCccHHHHHHhcCHHHHHHHHhcCCCcc---ccccccccHHHH
Confidence 6999999887766555444332211 11 556679999999999999999999999999998 999999999999
Q ss_pred HHHcCCHHHHHHHHhh
Q 039985 225 AVKRRQYKVFELITKE 240 (357)
Q Consensus 225 A~~~g~~~iv~~Ll~~ 240 (357)
|+..|+..++..+|.+
T Consensus 95 Av~~g~~q~i~~vlr~ 110 (560)
T KOG0522|consen 95 AVSTGNEQIITEVLRH 110 (560)
T ss_pred HHHcCCHHHHHHHHHH
Confidence 9999999999888775
|
|
| >KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.62 E-value=1e-07 Score=92.13 Aligned_cols=90 Identities=11% Similarity=0.055 Sum_probs=78.1
Q ss_pred HHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHH
Q 039985 145 KAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHV 224 (357)
Q Consensus 145 pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~ 224 (357)
-|..|+....+..+-+||.+|........ ..+.+|+|+||+||+.|++.+.++|+=+|.|+. .+|.+|+|+|.|
T Consensus 627 qLl~A~~~~Dl~t~~lLLAhg~~~e~~~t---~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~---~rda~g~t~l~y 700 (749)
T KOG0705|consen 627 QLLRAVAAEDLQTAILLLAHGSREEVNET---CGEGDGRTALHLAARKGNVVLAQLLIWYGVDVM---ARDAHGRTALFY 700 (749)
T ss_pred HHHHHHHHHHHHHHHHHHhccCchhhhcc---ccCCCCcchhhhhhhhcchhHHHHHHHhCccce---ecccCCchhhhh
Confidence 56778888889999999999876442111 334569999999999999999999999999998 999999999999
Q ss_pred HHHcCCHHHHHHHHhh
Q 039985 225 AVKRRQYKVFELITKE 240 (357)
Q Consensus 225 A~~~g~~~iv~~Ll~~ 240 (357)
|-+.|.-+|+.+|+..
T Consensus 701 ar~a~sqec~d~llq~ 716 (749)
T KOG0705|consen 701 ARQAGSQECIDVLLQY 716 (749)
T ss_pred HhhcccHHHHHHHHHc
Confidence 9999999999999983
|
|
| >KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.62 E-value=2.7e-08 Score=94.14 Aligned_cols=83 Identities=20% Similarity=0.234 Sum_probs=77.5
Q ss_pred cCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcH
Q 039985 180 WAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTL 259 (357)
Q Consensus 180 ~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~Tp 259 (357)
.++.-++++||+.|.+..++.+.-.|.|+. ..|.+.+|+||+||..|+.+++++|++. .+.+.+.+|..|+||
T Consensus 504 ~~~~i~~~~aa~~GD~~alrRf~l~g~D~~---~~DyD~RTaLHvAAaEG~v~v~kfl~~~----~kv~~~~kDRw~rtP 576 (622)
T KOG0506|consen 504 NDTVINVMYAAKNGDLSALRRFALQGMDLE---TKDYDDRTALHVAAAEGHVEVVKFLLNA----CKVDPDPKDRWGRTP 576 (622)
T ss_pred ccchhhhhhhhhcCCHHHHHHHHHhccccc---ccccccchhheeecccCceeHHHHHHHH----HcCCCChhhccCCCc
Confidence 347789999999999999999999999998 9999999999999999999999999997 677999999999999
Q ss_pred HHHHHHcCCC
Q 039985 260 LHHVADMKHY 269 (357)
Q Consensus 260 Lh~Aa~~g~~ 269 (357)
|.-|...+|.
T Consensus 577 lDdA~~F~h~ 586 (622)
T KOG0506|consen 577 LDDAKHFKHK 586 (622)
T ss_pred chHhHhcCcH
Confidence 9999999983
|
|
| >KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.60 E-value=1.7e-07 Score=89.22 Aligned_cols=86 Identities=14% Similarity=0.148 Sum_probs=77.3
Q ss_pred HHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcC-CCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCcCc
Q 039985 104 TISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCT-NKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNWAI 182 (357)
Q Consensus 104 ~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~-~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~G 182 (357)
-||..++.|+.+.+-.||..|++ ++-.+ ..|.| |||.|+..|+.--+++|+-+|+++. ..|..|
T Consensus 136 QLhasvRt~nlet~LRll~lGA~-------~N~~hpekg~T-pLHvAAk~Gq~~Q~ElL~vYGAD~~-------a~d~~G 200 (669)
T KOG0818|consen 136 QLHSSVRTGNLETCLRLLSLGAQ-------ANFFHPEKGNT-PLHVAAKAGQILQAELLAVYGADPG-------AQDSSG 200 (669)
T ss_pred HHHHHhhcccHHHHHHHHHcccc-------cCCCCcccCCc-hhHHHHhccchhhhhHHhhccCCCC-------CCCCCC
Confidence 59999999999999999999998 55444 57888 9999999999999999999999998 777779
Q ss_pred chHHHHHHHCCCHHHHHHHHhh
Q 039985 183 RLTLLFAASNGITEILKEIIHQ 204 (357)
Q Consensus 183 ~TpLh~Aa~~G~~~iv~~Ll~~ 204 (357)
+||+.+|-..||-++.+-|++.
T Consensus 201 mtP~~~AR~~gH~~laeRl~e~ 222 (669)
T KOG0818|consen 201 MTPVDYARQGGHHELAERLVEI 222 (669)
T ss_pred CcHHHHHHhcCchHHHHHHHHH
Confidence 9999999999999988887764
|
|
| >PF13606 Ank_3: Ankyrin repeat | Back alignment and domain information |
|---|
Probab=98.54 E-value=1.1e-07 Score=56.77 Aligned_cols=29 Identities=14% Similarity=0.265 Sum_probs=27.3
Q ss_pred CCCcHHHHHHHhcCcHHHHHHHHHcCCCCC
Q 039985 140 KGNMIKAKKFVDFSAAELVELFVKKDCTIK 169 (357)
Q Consensus 140 ~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~ 169 (357)
+|+| |||+|+..|+.++|++||++|++++
T Consensus 1 ~G~T-~Lh~A~~~g~~e~v~~Ll~~gadvn 29 (30)
T PF13606_consen 1 NGNT-PLHLAASNGNIEIVKYLLEHGADVN 29 (30)
T ss_pred CCCC-HHHHHHHhCCHHHHHHHHHcCCCCC
Confidence 5889 9999999999999999999999876
|
|
| >PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature | Back alignment and domain information |
|---|
Probab=98.54 E-value=1.3e-07 Score=57.82 Aligned_cols=33 Identities=21% Similarity=0.204 Sum_probs=30.1
Q ss_pred CCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccC
Q 039985 217 KEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDK 254 (357)
Q Consensus 217 ~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~ 254 (357)
+|+||||+|+..|+.+++++|++ .+++++.+|+
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~-----~ga~~~~~d~ 33 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLK-----HGADINARDN 33 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHH-----TTSCTTCBCT
T ss_pred CcccHHHHHHHHHHHHHHHHHHH-----CcCCCCCCCC
Confidence 59999999999999999999998 6888888874
|
Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A .... |
| >KOG0522 consensus Ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.53 E-value=2.4e-07 Score=89.16 Aligned_cols=91 Identities=13% Similarity=0.099 Sum_probs=74.9
Q ss_pred CHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCcCc
Q 039985 103 STISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNWAI 182 (357)
Q Consensus 103 t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~G 182 (357)
-|||+++...+.+-....+..... ......|..|.| |||+|+..|+.+.++.|+..|+++. .+|..|
T Consensus 22 ~~lh~~~~~~~~~sl~~el~~~~~-----~~id~~D~~g~T-pLhlAV~Lg~~~~a~~Ll~a~Adv~-------~kN~~g 88 (560)
T KOG0522|consen 22 KPLHWAVVTTDSDSLEQELLAKVS-----LVIDRRDPPGRT-PLHLAVRLGHVEAARILLSAGADVS-------IKNNEG 88 (560)
T ss_pred cccchhhhccchhhHHHHHhhhhh-----ceeccccCCCCc-cHHHHHHhcCHHHHHHHHhcCCCcc-------cccccc
Confidence 369999988887665554443332 125568889999 9999999999999999999999987 777889
Q ss_pred chHHHHHHHCCCHHHHHHHHhhCC
Q 039985 183 RLTLLFAASNGITEILKEIIHQHP 206 (357)
Q Consensus 183 ~TpLh~Aa~~G~~~iv~~Ll~~~~ 206 (357)
++|||-|+..|+..++..++.+.-
T Consensus 89 Ws~L~EAv~~g~~q~i~~vlr~~~ 112 (560)
T KOG0522|consen 89 WSPLHEAVSTGNEQIITEVLRHLK 112 (560)
T ss_pred ccHHHHHHHcCCHHHHHHHHHHhH
Confidence 999999999999999998887643
|
|
| >KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.28 E-value=2.3e-06 Score=83.09 Aligned_cols=93 Identities=12% Similarity=0.146 Sum_probs=80.3
Q ss_pred HHHHHHhcCCHHHHHHHHhcCcc-hhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCcCc
Q 039985 104 TISLGLGKGNMLKAKKLVDFSAG-ELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNWAI 182 (357)
Q Consensus 104 ~Lh~A~~~g~~~~vk~Ll~~~~~-~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~G 182 (357)
-|..|+..-++..+-+||.++.. +++ ....+.+|+| +||+|+..|++.+.++|+=+|+++. .+|..|
T Consensus 627 qLl~A~~~~Dl~t~~lLLAhg~~~e~~----~t~~~~~grt-~LHLa~~~gnVvl~QLLiWyg~dv~-------~rda~g 694 (749)
T KOG0705|consen 627 QLLRAVAAEDLQTAILLLAHGSREEVN----ETCGEGDGRT-ALHLAARKGNVVLAQLLIWYGVDVM-------ARDAHG 694 (749)
T ss_pred HHHHHHHHHHHHHHHHHHhccCchhhh----ccccCCCCcc-hhhhhhhhcchhHHHHHHHhCccce-------ecccCC
Confidence 47788888899999999988876 222 3445677899 9999999999999999999999987 677779
Q ss_pred chHHHHHHHCCCHHHHHHHHhhCCCc
Q 039985 183 RLTLLFAASNGITEILKEIIHQHPQA 208 (357)
Q Consensus 183 ~TpLh~Aa~~G~~~iv~~Ll~~~~~~ 208 (357)
.|||.||-+.|.-+|+..|+++|...
T Consensus 695 ~t~l~yar~a~sqec~d~llq~gcp~ 720 (749)
T KOG0705|consen 695 RTALFYARQAGSQECIDVLLQYGCPD 720 (749)
T ss_pred chhhhhHhhcccHHHHHHHHHcCCCc
Confidence 99999999999999999999998643
|
|
| >KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.25 E-value=8.4e-07 Score=92.01 Aligned_cols=89 Identities=16% Similarity=0.162 Sum_probs=79.3
Q ss_pred CCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCC
Q 039985 139 NKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKE 218 (357)
Q Consensus 139 ~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G 218 (357)
..|.+ +||.|+..|..-++++|++.|++++ ..|..|.||||.+...|+...+..|+++|++.. ..|.+|
T Consensus 654 ~~~~s-~lh~a~~~~~~~~~e~ll~~ga~vn-------~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~---a~~~~~ 722 (785)
T KOG0521|consen 654 CIGCS-LLHVAVGTGDSGAVELLLQNGADVN-------ALDSKGRTPLHHATASGHTSIACLLLKRGADPN---AFDPDG 722 (785)
T ss_pred hcccc-hhhhhhccchHHHHHHHHhcCCcch-------hhhccCCCcchhhhhhcccchhhhhcccccccc---ccCccC
Confidence 35688 9999999999999999999999987 777779999999999999999999999999998 999999
Q ss_pred ChHHHHHHHcCCHHHHHHHH
Q 039985 219 QNILHVAVKRRQYKVFELIT 238 (357)
Q Consensus 219 ~TpLh~A~~~g~~~iv~~Ll 238 (357)
.+||++|....+.+++-++.
T Consensus 723 ~~~l~~a~~~~~~d~~~l~~ 742 (785)
T KOG0521|consen 723 KLPLDIAMEAANADIVLLLR 742 (785)
T ss_pred cchhhHHhhhccccHHHHHh
Confidence 99999998887777766663
|
|
| >KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.24 E-value=3.9e-06 Score=85.24 Aligned_cols=122 Identities=16% Similarity=0.169 Sum_probs=101.3
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCc
Q 039985 101 NISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNW 180 (357)
Q Consensus 101 g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~ 180 (357)
+.-....|+.+|+.-.|+..++.... ..+..+..|.-|++ +|+.|+.+.+.+++++|++++...
T Consensus 25 ~e~~fL~a~E~gd~~~V~k~l~~~~~---~~lninc~d~lGr~-al~iai~nenle~~eLLl~~~~~~------------ 88 (822)
T KOG3609|consen 25 GEKGFLLAHENGDVPLVAKALEYKAV---SKLNINCRDPLGRL-ALHIAIDNENLELQELLLDTSSEE------------ 88 (822)
T ss_pred hhHHHHHHHHcCChHHHHHHHHhccc---cccchhccChHhhh-ceecccccccHHHHHHHhcCcccc------------
Confidence 55677899999999999999987665 22447889999999 999999999999999999986553
Q ss_pred CcchHHHHHHHCCCHHHHHHHHhhCCCcccc-------cccCCCCChHHHHHHHcCCHHHHHHHHhh
Q 039985 181 AIRLTLLFAASNGITEILKEIIHQHPQAILL-------DNLNEKEQNILHVAVKRRQYKVFELITKE 240 (357)
Q Consensus 181 ~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~-------~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~ 240 (357)
.-+|.+|.+.|.+++|+.++.+-...... ...-..+.|||.+||..++++|+++||.+
T Consensus 89 --gdALL~aI~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~k 153 (822)
T KOG3609|consen 89 --GDALLLAIAVGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEILQCLLTR 153 (822)
T ss_pred --chHHHHHHHHHHHHHHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcchHHHHHHHHc
Confidence 35899999999999999999875543100 13445678999999999999999999985
|
|
| >KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown] | Back alignment and domain information |
|---|
Probab=98.22 E-value=1.3e-06 Score=90.38 Aligned_cols=156 Identities=9% Similarity=0.021 Sum_probs=108.0
Q ss_pred CCCCCCCCCHHHHHHhcCCHHHHHHHHhc-CcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHH-cCCCCCCCC
Q 039985 95 STTSPANISTISLGLGKGNMLKAKKLVDF-SAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVK-KDCTIKGVP 172 (357)
Q Consensus 95 ~~~~~~g~t~Lh~A~~~g~~~~vk~Ll~~-~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~-~g~~~~~~~ 172 (357)
...+..|.+.||+++..+..-++..+++. +.. ....|.+|.- -+|+.+. ++.+.+-+|+. .|..++
T Consensus 568 ~~~~~r~~lllhL~a~~lyawLie~~~e~~~~~-------~~eld~d~qg-V~hfca~-lg~ewA~ll~~~~~~ai~--- 635 (975)
T KOG0520|consen 568 SSVNFRDMLLLHLLAELLYAWLIEKVIEWAGSG-------DLELDRDGQG-VIHFCAA-LGYEWAFLPISADGVAID--- 635 (975)
T ss_pred ccCCCcchHHHHHHHHHhHHHHHHHHhcccccC-------chhhcccCCC-hhhHhhh-cCCceeEEEEeecccccc---
Confidence 34455689999999999999999999997 443 3455667777 7777444 45555545444 455555
Q ss_pred CCccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccc---cccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccc-
Q 039985 173 NHKKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILL---DNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKW- 248 (357)
Q Consensus 173 ~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~---~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~- 248 (357)
.+|..|+||||||+.+|+..++..|++.|++...+ ...+..|.|+--+|..+|+..+..+|-+..-...-..
T Consensus 636 ----i~D~~G~tpL~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~lse~~L~~~~~~~ 711 (975)
T KOG0520|consen 636 ----IRDRNGWTPLHWAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYLSEKALSAHLSNL 711 (975)
T ss_pred ----cccCCCCcccchHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHHhhhHHHHHHhhc
Confidence 55666999999999999999999999888876511 2334568999999999999999888854311000011
Q ss_pred -cccccCCCCcHHHHHHHc
Q 039985 249 -ASRIDKKGYTLLHHVADM 266 (357)
Q Consensus 249 -~~~~d~~G~TpLh~Aa~~ 266 (357)
.+.....+.+|.--|.+.
T Consensus 712 ~~~~~~~s~~~~~~~~~~t 730 (975)
T KOG0520|consen 712 ELADPNLSADSEEDKAEKT 730 (975)
T ss_pred cccccccCCCchhhhhhhc
Confidence 112233467777777666
|
|
| >KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=98.19 E-value=1.5e-06 Score=90.18 Aligned_cols=79 Identities=16% Similarity=0.120 Sum_probs=75.3
Q ss_pred cchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcHHH
Q 039985 182 IRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTLLH 261 (357)
Q Consensus 182 G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLh 261 (357)
|.|+||.|+..|..-++++|++.|++++ ..|..|+||||.+...|+...+..|++ .+++.+..|.+|.+||+
T Consensus 656 ~~s~lh~a~~~~~~~~~e~ll~~ga~vn---~~d~~g~~plh~~~~~g~~~~~~~ll~-----~~a~~~a~~~~~~~~l~ 727 (785)
T KOG0521|consen 656 GCSLLHVAVGTGDSGAVELLLQNGADVN---ALDSKGRTPLHHATASGHTSIACLLLK-----RGADPNAFDPDGKLPLD 727 (785)
T ss_pred ccchhhhhhccchHHHHHHHHhcCCcch---hhhccCCCcchhhhhhcccchhhhhcc-----ccccccccCccCcchhh
Confidence 8999999999999999999999999988 999999999999999999999999988 78899999999999999
Q ss_pred HHHHcCC
Q 039985 262 HVADMKH 268 (357)
Q Consensus 262 ~Aa~~g~ 268 (357)
+|....+
T Consensus 728 ~a~~~~~ 734 (785)
T KOG0521|consen 728 IAMEAAN 734 (785)
T ss_pred HHhhhcc
Confidence 9988854
|
|
| >KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.97 E-value=1.7e-05 Score=67.15 Aligned_cols=61 Identities=13% Similarity=0.067 Sum_probs=57.0
Q ss_pred CCCcCcchHHHHHHHCCCHHHHHHHHhhC-CCcccccccCCCCChHHHHHHHcCCHHHHHHHHhh
Q 039985 177 DKNWAIRLTLLFAASNGITEILKEIIHQH-PQAILLDNLNEKEQNILHVAVKRRQYKVFELITKE 240 (357)
Q Consensus 177 ~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~-~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~ 240 (357)
.+|..|+||||.||..|..+.+.+|+.+| +.+. .+|..|.+++.+|-+.|+.++|..|.+.
T Consensus 7 ~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vg---v~d~ssldaaqlaek~g~~~fvh~lfe~ 68 (223)
T KOG2384|consen 7 ARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVG---VTDESSLDAAQLAEKGGAQAFVHSLFEN 68 (223)
T ss_pred chhhhcchHHHHHhhhcchhHHHHHhccCccccc---ccccccchHHHHHHhcChHHHHHHHHHH
Confidence 67788999999999999999999999999 6666 9999999999999999999999999874
|
|
| >KOG0511 consensus Ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.97 E-value=1.2e-05 Score=74.53 Aligned_cols=60 Identities=8% Similarity=0.093 Sum_probs=55.5
Q ss_pred CCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCC
Q 039985 102 ISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIK 169 (357)
Q Consensus 102 ~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~ 169 (357)
.--|..||+.|+++.|++|++.|-. .+..|..... ||.+|+..||.++|++||++|+-..
T Consensus 37 f~elceacR~GD~d~v~~LVetgvn-------VN~vD~fD~s-pL~lAsLcGHe~vvklLLenGAiC~ 96 (516)
T KOG0511|consen 37 FGELCEACRAGDVDRVRYLVETGVN-------VNAVDRFDSS-PLYLASLCGHEDVVKLLLENGAICS 96 (516)
T ss_pred hHHHHHHhhcccHHHHHHHHHhCCC-------cchhhccccc-HHHHHHHcCcHHHHHHHHHcCCccc
Confidence 3468999999999999999998887 7889999999 9999999999999999999999765
|
|
| >KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.92 E-value=1.8e-05 Score=80.62 Aligned_cols=102 Identities=16% Similarity=0.118 Sum_probs=78.9
Q ss_pred CCCCCCCCCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCC
Q 039985 93 ESSTTSPANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVP 172 (357)
Q Consensus 93 ~~~~~~~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~ 172 (357)
..+-.++-|+++||.|+.+-|.+++++|++.... . | - +|.+|+..|..++|++++.+-.......
T Consensus 54 ninc~d~lGr~al~iai~nenle~~eLLl~~~~~-------~------g-d-ALL~aI~~~~v~~VE~ll~~~~~~~~~~ 118 (822)
T KOG3609|consen 54 NINCRDPLGRLALHIAIDNENLELQELLLDTSSE-------E------G-D-ALLLAIAVGSVPLVELLLVHFVDAPYLE 118 (822)
T ss_pred chhccChHhhhceecccccccHHHHHHHhcCccc-------c------c-h-HHHHHHHHHHHHHHHHHHhcccccchhc
Confidence 3455567799999999999999999999988654 1 1 1 9999999999999999999754321110
Q ss_pred ---CCccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcc
Q 039985 173 ---NHKKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAI 209 (357)
Q Consensus 173 ---~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~ 209 (357)
+.+...-..+.|||++||...|.||++.||++|+++.
T Consensus 119 ~~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~~i~ 158 (822)
T KOG3609|consen 119 RSGDANSPHFTPDITPLMLAAHLNNFEILQCLLTRGHCIP 158 (822)
T ss_pred cccccCcccCCCCccHHHHHHHhcchHHHHHHHHcCCCCC
Confidence 0011222346899999999999999999999999876
|
|
| >KOG0511 consensus Ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.86 E-value=6.1e-05 Score=70.07 Aligned_cols=105 Identities=9% Similarity=0.089 Sum_probs=70.0
Q ss_pred HHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHH
Q 039985 145 KAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHV 224 (357)
Q Consensus 145 pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~ 224 (357)
-|..||+.|..+.|++|++.|.++| .+|.-..+||.+|+-.||.++|++|+++|+-.. .-.-+|.- -|+
T Consensus 39 elceacR~GD~d~v~~LVetgvnVN-------~vD~fD~spL~lAsLcGHe~vvklLLenGAiC~---rdtf~G~R-C~Y 107 (516)
T KOG0511|consen 39 ELCEACRAGDVDRVRYLVETGVNVN-------AVDRFDSSPLYLASLCGHEDVVKLLLENGAICS---RDTFDGDR-CHY 107 (516)
T ss_pred HHHHHhhcccHHHHHHHHHhCCCcc-------hhhcccccHHHHHHHcCcHHHHHHHHHcCCccc---ccccCcch-hhh
Confidence 7888888888888888888888887 777778888888888888888888888887654 33344543 455
Q ss_pred HHHcCCHHHHHHHHhhhccCCccccccccCCCCcHHHHHHHcCC
Q 039985 225 AVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTLLHHVADMKH 268 (357)
Q Consensus 225 A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~ 268 (357)
++.+.+ |=++||+. ....+.|...--+-|+-+...+
T Consensus 108 gaLnd~--IR~mllsy------di~KA~d~~qP~aahi~s~l~d 143 (516)
T KOG0511|consen 108 GALNDR--IRRMLLSY------DILKAFDARQPPAAHIQSSLRD 143 (516)
T ss_pred hhhhHH--HHHHHHHH------HHHHHhhccCCcchHHHHHhhc
Confidence 555543 34555542 1122233333444566555554
|
|
| >KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown] | Back alignment and domain information |
|---|
Probab=97.85 E-value=1.3e-05 Score=83.04 Aligned_cols=122 Identities=15% Similarity=-0.032 Sum_probs=90.7
Q ss_pred cCCCCCcHHHHHHHhcCcHHHHHHHHHc-CCCCCCCCCCccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccC
Q 039985 137 CTNKGNMIKAKKFVDFSAAELVELFVKK-DCTIKGVPNHKKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLN 215 (357)
Q Consensus 137 ~~~~g~t~pLh~A~~~g~~~iv~~Ll~~-g~~~~~~~~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d 215 (357)
..-.|.+ -+|+++..++..+++.+++. |.... ..+.+|.--+|+ |..|+.+.+-+|+....... +.+|
T Consensus 570 ~~~r~~l-llhL~a~~lyawLie~~~e~~~~~~~-------eld~d~qgV~hf-ca~lg~ewA~ll~~~~~~ai--~i~D 638 (975)
T KOG0520|consen 570 VNFRDML-LLHLLAELLYAWLIEKVIEWAGSGDL-------ELDRDGQGVIHF-CAALGYEWAFLPISADGVAI--DIRD 638 (975)
T ss_pred CCCcchH-HHHHHHHHhHHHHHHHHhcccccCch-------hhcccCCChhhH-hhhcCCceeEEEEeeccccc--cccc
Confidence 4567888 99999999999999999986 44333 233336666777 66777787777765544444 5999
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHhhhccCCcc--ccccccCCCCcHHHHHHHcCCCC
Q 039985 216 EKEQNILHVAVKRRQYKVFELITKEMQLSVPK--WASRIDKKGYTLLHHVADMKHYK 270 (357)
Q Consensus 216 ~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~--~~~~~d~~G~TpLh~Aa~~g~~~ 270 (357)
..||||||+|+.+|+..++..|++... ..+. +....+-.|.|+-.+|...|+..
T Consensus 639 ~~G~tpL~wAa~~G~e~l~a~l~~lga-~~~~~tdps~~~p~g~ta~~la~s~g~~g 694 (975)
T KOG0520|consen 639 RNGWTPLHWAAFRGREKLVASLIELGA-DPGAVTDPSPETPGGKTAADLARANGHKG 694 (975)
T ss_pred CCCCcccchHhhcCHHHHHHHHHHhcc-ccccccCCCCCCCCCCchhhhhhcccccc
Confidence 999999999999999999999976321 1222 44455667999999999999854
|
|
| >KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.00028 Score=59.89 Aligned_cols=68 Identities=7% Similarity=-0.006 Sum_probs=58.2
Q ss_pred hhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcC-CCCCCCCCCccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcc
Q 039985 134 KKDCTNKGNMIKAKKFVDFSAAELVELFVKKD-CTIKGVPNHKKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAI 209 (357)
Q Consensus 134 ~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g-~~~~~~~~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~ 209 (357)
.+..|..|+| ||+.|+..|+.+.|.+|+.+| +.+. ..+..|.+++.+|-+.|+.++|+.|.+...+-.
T Consensus 5 in~rD~fgWT-almcaa~eg~~eavsyllgrg~a~vg-------v~d~ssldaaqlaek~g~~~fvh~lfe~~~ets 73 (223)
T KOG2384|consen 5 INARDAFGWT-ALMCAAMEGSNEAVSYLLGRGVAFVG-------VTDESSLDAAQLAEKGGAQAFVHSLFENDRETS 73 (223)
T ss_pred ccchhhhcch-HHHHHhhhcchhHHHHHhccCccccc-------ccccccchHHHHHHhcChHHHHHHHHHHhccCC
Confidence 4668999999 999999999999999999999 4544 344459999999999999999999988755443
|
|
| >smart00248 ANK ankyrin repeats | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.00064 Score=38.37 Aligned_cols=28 Identities=29% Similarity=0.323 Sum_probs=24.0
Q ss_pred cchHHHHHHHCCCHHHHHHHHhhCCCcc
Q 039985 182 IRLTLLFAASNGITEILKEIIHQHPQAI 209 (357)
Q Consensus 182 G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~ 209 (357)
|.||||+|+..|+.++++.|++++.++.
T Consensus 2 ~~~~l~~~~~~~~~~~~~~ll~~~~~~~ 29 (30)
T smart00248 2 GRTPLHLAAENGNLEVVKLLLDKGADIN 29 (30)
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 6899999999999999999998887553
|
Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure. |
| >KOG2505 consensus Ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.001 Score=64.22 Aligned_cols=76 Identities=9% Similarity=0.090 Sum_probs=59.8
Q ss_pred HHHHHHHHHcCCCCCCCCCCccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHH
Q 039985 155 AELVELFVKKDCTIKGVPNHKKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVF 234 (357)
Q Consensus 155 ~~iv~~Ll~~g~~~~~~~~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv 234 (357)
...+++|.+++.+.+..-. ....+..-.|+||+|+..|...+|.+||+.|+|+. ..|..|+||..++. +.+|=
T Consensus 404 p~~ie~lken~lsgnf~~~-pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~---~kd~~Grtpy~ls~---nkdVk 476 (591)
T KOG2505|consen 404 PDSIEALKENLLSGNFDVT-PEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPS---TKDGAGRTPYSLSA---NKDVK 476 (591)
T ss_pred hhHHHHHHhcCCccccccc-ccccccccchHHHHHHhcchHHHHHHHHHhcCCch---hcccCCCCcccccc---cHHHH
Confidence 5678889888887763222 22445556799999999999999999999999998 99999999999987 44444
Q ss_pred HHH
Q 039985 235 ELI 237 (357)
Q Consensus 235 ~~L 237 (357)
..+
T Consensus 477 ~~F 479 (591)
T KOG2505|consen 477 SIF 479 (591)
T ss_pred HHH
Confidence 444
|
|
| >smart00248 ANK ankyrin repeats | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.0055 Score=34.25 Aligned_cols=29 Identities=21% Similarity=0.308 Sum_probs=25.4
Q ss_pred CCCcHHHHHHHhcCcHHHHHHHHHcCCCCC
Q 039985 140 KGNMIKAKKFVDFSAAELVELFVKKDCTIK 169 (357)
Q Consensus 140 ~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~ 169 (357)
.|.| |+|+|+..++.++++.|++.+.+++
T Consensus 1 ~~~~-~l~~~~~~~~~~~~~~ll~~~~~~~ 29 (30)
T smart00248 1 DGRT-PLHLAAENGNLEVVKLLLDKGADIN 29 (30)
T ss_pred CCCC-HHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 3677 9999999999999999999987653
|
Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure. |
| >KOG2505 consensus Ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.45 E-value=0.022 Score=55.22 Aligned_cols=51 Identities=18% Similarity=0.162 Sum_probs=42.8
Q ss_pred CCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCcCcchHHHHHHHCCCHHHHHHHH
Q 039985 141 GNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNWAIRLTLLFAASNGITEILKEII 202 (357)
Q Consensus 141 g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll 202 (357)
..| +||+|+..|..++|.+||+.|++.. .+|..|.||..+++ +.+|=..++
T Consensus 430 tsT-~LH~aa~qg~~k~v~~~Leeg~Dp~-------~kd~~Grtpy~ls~---nkdVk~~F~ 480 (591)
T KOG2505|consen 430 TST-FLHYAAAQGARKCVKYFLEEGCDPS-------TKDGAGRTPYSLSA---NKDVKSIFI 480 (591)
T ss_pred cch-HHHHHHhcchHHHHHHHHHhcCCch-------hcccCCCCcccccc---cHHHHHHHH
Confidence 456 9999999999999999999998877 77788999999987 555555555
|
|
| >PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain | Back alignment and domain information |
|---|
Probab=87.22 E-value=1.9 Score=31.31 Aligned_cols=47 Identities=11% Similarity=0.120 Sum_probs=40.0
Q ss_pred CHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHc
Q 039985 103 STISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKK 164 (357)
Q Consensus 103 t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~ 164 (357)
..|..|+..||.++++.+++.+..+ .. .+..|+...+-+++++|++.
T Consensus 8 ~tl~~Ai~GGN~eII~~c~~~~~~~--------------~~-~l~~AI~~H~n~i~~~l~~~ 54 (76)
T PF11929_consen 8 KTLEYAIIGGNFEIINICLKKNKPD--------------ND-CLEYAIKSHNNEIADWLIEN 54 (76)
T ss_pred HHHHHHHhCCCHHHHHHHHHHhccH--------------HH-HHHHHHHHhhHHHHHHHHHh
Confidence 5789999999999999999765431 12 89999999999999999987
|
These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ]. |
| >PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain | Back alignment and domain information |
|---|
Probab=85.43 E-value=1.9 Score=31.34 Aligned_cols=46 Identities=17% Similarity=0.145 Sum_probs=25.5
Q ss_pred HHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCcCcchHHHHHHHCCCHHHHHHHHhh
Q 039985 145 KAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNWAIRLTLLFAASNGITEILKEIIHQ 204 (357)
Q Consensus 145 pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~ 204 (357)
-+..|+..|+.|+++.+++.+.. . ...+..|...-+.+++++|++.
T Consensus 9 tl~~Ai~GGN~eII~~c~~~~~~-~-------------~~~l~~AI~~H~n~i~~~l~~~ 54 (76)
T PF11929_consen 9 TLEYAIIGGNFEIINICLKKNKP-D-------------NDCLEYAIKSHNNEIADWLIEN 54 (76)
T ss_pred HHHHHHhCCCHHHHHHHHHHhcc-H-------------HHHHHHHHHHhhHHHHHHHHHh
Confidence 45566666666666666654311 1 2446666666666666666554
|
These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ]. |
| >PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC | Back alignment and domain information |
|---|
Probab=84.40 E-value=5.2 Score=35.54 Aligned_cols=116 Identities=9% Similarity=0.052 Sum_probs=68.1
Q ss_pred HHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcC----CCCCCCCCCccCCC
Q 039985 104 TISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKD----CTIKGVPNHKKDKN 179 (357)
Q Consensus 104 ~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g----~~~~~~~~~~~~~~ 179 (357)
.|-.|+..-|.+.+..++....+ -.+ ++.+|...+..+++-+|+.+= .++.....
T Consensus 156 sledAV~AsN~~~i~~~VtdKkd--------------A~~-Am~~si~~~K~dva~~lls~f~ft~~dv~~~~~------ 214 (284)
T PF06128_consen 156 SLEDAVKASNYEEISNLVTDKKD--------------AHQ-AMWLSIGNAKEDVALYLLSKFNFTKQDVASMEK------ 214 (284)
T ss_pred cHHHHHhhcCHHHHHHHhcchHH--------------HHH-HHHHHhcccHHHHHHHHHhhcceecchhhhcCc------
Confidence 46667777777665555544332 112 777777777777777777652 22221211
Q ss_pred cCcchHHHHHHH--CCCHHHHHHHHhhCC-CcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhc
Q 039985 180 WAIRLTLLFAAS--NGITEILKEIIHQHP-QAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQ 242 (357)
Q Consensus 180 ~~G~TpLh~Aa~--~G~~~iv~~Ll~~~~-~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~ 242 (357)
+.--+-++.+ ..+..|++++|++|- +++.--.+-+.|.|-|--|+.++..+++.+||+.+.
T Consensus 215 --~~ydieY~LS~h~a~~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~Ky~~~emi~~Llk~GA 278 (284)
T PF06128_consen 215 --ELYDIEYLLSEHSASYKVLEYFINRGLVDVNKKFQKVNSGDTMLDNAMKYKNSEMIAFLLKYGA 278 (284)
T ss_pred --chhhHHHHHhhcCCcHHHHHHHHhccccccchhhhccCCcchHHHhHHhcCcHHHHHHHHHcCc
Confidence 3334444332 345677777777763 221112455668888888888888888888877643
|
The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol []. |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 357 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-06 | |
| 1sw6_A | 327 | Regulatory protein SWI6; transcription regulation, | 2e-04 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 48.7 bits (115), Expect = 2e-06
Identities = 61/388 (15%), Positives = 116/388 (29%), Gaps = 110/388 (28%)
Query: 22 KKQMHKNANKLLKKLVKEETLCL----GDGEQNPEISLLSPESSSTSLPNPE--ISSSNP 75
+ Q + + L +L + + + G G+ + + + ++ N
Sbjct: 133 RLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNC 192
Query: 76 ESSTSSL-----------PNPEIFSPDPESSTTSPANISTISLGLGKGNMLKAKK----- 119
S + L PN ++ + S+ I +I L +LK+K
Sbjct: 193 NSPETVLEMLQKLLYQIDPN---WTSRSDHSSNIKLRIHSIQAELR--RLLKSKPYENCL 247
Query: 120 LVDFSAGELDE----------------LLLKKDC--TNKGNMIKAKKFV------DFSAA 155
LV L LL + T+ + +
Sbjct: 248 LV------LLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPD 301
Query: 156 ELVELFVKK-DCTIKGVPNHKKDKN-WAIRLTLLFAASNGITEILKEIIH-----QHPQA 208
E+ L +K DC + +P N + + I E +++ + +H
Sbjct: 302 EVKSLLLKYLDCRPQDLPREVLTTNPRRLSI---------IAESIRDGLATWDNWKHVNC 352
Query: 209 ILLDNLNEKEQNILHVAVKRRQYK---VFE---LITKEMQLSVPKWASRIDKKGYTLLHH 262
L + E N+L A R+ + VF I + LS+ W I +++
Sbjct: 353 DKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIP-TILLSL-IWFDVIKSDVMVVVNK 410
Query: 263 VADM----KHYKEGTRPGPVLQFQEELQLFEHVKEIMPRHYAMHR---DEKNKMTASDLF 315
+ K KE T P + + +++L YA+HR D N D
Sbjct: 411 LHKYSLVEKQPKESTISIPSIYLELKVKL--------ENEYALHRSIVDHYNIPKTFDSD 462
Query: 316 NLT--------------HEDQLRKAQEW 329
+L H + +
Sbjct: 463 DLIPPYLDQYFYSHIGHHLKNIEHPERM 490
|
| >1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327 | Back alignment and structure |
|---|
Score = 41.6 bits (97), Expect = 2e-04
Identities = 30/236 (12%), Positives = 63/236 (26%), Gaps = 42/236 (17%)
Query: 45 GDGEQNPEISLLSPESSSTSLPNPEISSSNPESSTSSLPNPEIFSPDPESSTTSPANIST 104
+ + + + + S+P +LP+P + + + +
Sbjct: 12 NENNGTDDNDRTAGPIITFTHDLTSDFLSSPLKIMKALPSPVVNDNEQKMKLEAFLQRL- 70
Query: 105 ISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKK 164
+ + + S + N + D E+ + F
Sbjct: 71 ---------LFPEIQEMPTSLNNDSSNRNSEG--GSSNQQQQHVSFDSLLQEVNDAFPNT 119
Query: 165 DCTIKGVPNHKKDKNWAIRLTLL-FAASNGITEILKEIIHQHPQAILLD---NLNEK--- 217
+ N D++ T L + S E++K L+ N
Sbjct: 120 QLNL----NIPVDEH---GNTPLHWLTSIANLELVK---------HLVKHGSNRLYGDNM 163
Query: 218 EQNILHVAVKRR---QYKVFELITKEMQLSVPKWASRIDKKGYTLLHHVADMKHYK 270
++ L AVK FE + + + D T+LHH+
Sbjct: 164 GESCLVKAVKSVNNYDSGTFEALLDYLYPCL----ILEDSMNRTILHHIIITSGMT 215
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 357 | |||
| 3b7b_A | 237 | Euchromatic histone-lysine N-methyltransferase 1; | 100.0 | |
| 2xai_A | 261 | ASB-9, ankyrin repeat and SOCS box protein 9; tran | 100.0 | |
| 1oy3_D | 282 | Transcription factor inhibitor I-kappa-B-beta; pro | 100.0 | |
| 1yyh_A | 253 | HN1;, notch 1, ankyrin domain; ankyrin repeats, ce | 100.0 | |
| 3aji_A | 231 | 26S proteasome non-ATPase regulatory subunit 10; g | 100.0 | |
| 3d9h_A | 285 | CDNA FLJ77766, highly similar to HOMO sapiens anky | 100.0 | |
| 1k1a_A | 241 | B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa | 100.0 | |
| 1wdy_A | 285 | 2-5A-dependent ribonuclease; hydrolase, RNA-bindin | 100.0 | |
| 2dzn_A | 228 | Probable 26S proteasome regulatory subunit P28; an | 100.0 | |
| 1n11_A | 437 | Ankyrin; clathrin, BAND 3, anion exchanger, struct | 100.0 | |
| 4gpm_A | 169 | Engineered protein OR264; de novo protein, structu | 100.0 | |
| 4b93_B | 269 | Ankyrin repeat domain-containing protein 27; endoc | 100.0 | |
| 2xai_A | 261 | ASB-9, ankyrin repeat and SOCS box protein 9; tran | 100.0 | |
| 3utm_A | 351 | Tankyrase-1; tankyrase, TNKS, ankryin repeat clust | 100.0 | |
| 2f8y_A | 223 | Notch homolog 1, translocation-associated (drosoph | 100.0 | |
| 1n11_A | 437 | Ankyrin; clathrin, BAND 3, anion exchanger, struct | 100.0 | |
| 2rfa_A | 232 | Transient receptor potential cation channel subfa | 100.0 | |
| 1yyh_A | 253 | HN1;, notch 1, ankyrin domain; ankyrin repeats, ce | 99.98 | |
| 1s70_B | 299 | 130 kDa myosin-binding subunit of smooth muscle my | 99.98 | |
| 3ljn_A | 364 | Hypothetical protein; ankyrin, structural genomics | 99.97 | |
| 3aji_A | 231 | 26S proteasome non-ATPase regulatory subunit 10; g | 99.97 | |
| 1oy3_D | 282 | Transcription factor inhibitor I-kappa-B-beta; pro | 99.97 | |
| 4b93_B | 269 | Ankyrin repeat domain-containing protein 27; endoc | 99.97 | |
| 3eu9_A | 240 | Huntingtin-interacting protein 14; epigenetics, an | 99.97 | |
| 3hra_A | 201 | Ankyrin repeat family protein; structural protein; | 99.97 | |
| 1ikn_D | 236 | Protein (I-kappa-B-alpha), protein (NF-kappa-B P50 | 99.97 | |
| 1k1a_A | 241 | B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa | 99.97 | |
| 2dzn_A | 228 | Probable 26S proteasome regulatory subunit P28; an | 99.97 | |
| 3b7b_A | 237 | Euchromatic histone-lysine N-methyltransferase 1; | 99.97 | |
| 3v30_A | 172 | DNA-binding protein rfxank; structural genomics co | 99.97 | |
| 2fo1_E | 373 | LIN-12 protein; beta-barrel, protein-DNA complex, | 99.97 | |
| 2rfa_A | 232 | Transient receptor potential cation channel subfa | 99.97 | |
| 4g8k_A | 337 | 2-5A-dependent ribonuclease; ankyrin-repeat domain | 99.97 | |
| 2etb_A | 256 | Transient receptor potential cation channel subfam | 99.97 | |
| 2f8y_A | 223 | Notch homolog 1, translocation-associated (drosoph | 99.97 | |
| 2rfm_A | 192 | Putative ankyrin repeat protein TV1425; ANK repeat | 99.97 | |
| 3v31_A | 167 | Ankyrin repeat family A protein 2; structural geno | 99.97 | |
| 1wdy_A | 285 | 2-5A-dependent ribonuclease; hydrolase, RNA-bindin | 99.97 | |
| 1ikn_D | 236 | Protein (I-kappa-B-alpha), protein (NF-kappa-B P50 | 99.97 | |
| 3kea_A | 285 | K1L; tropism, ANK repeat, viral protein; 2.30A {Va | 99.97 | |
| 4gpm_A | 169 | Engineered protein OR264; de novo protein, structu | 99.97 | |
| 3ljn_A | 364 | Hypothetical protein; ankyrin, structural genomics | 99.97 | |
| 2y1l_E | 169 | Darpin-8.4; hydrolase-inhibitor complex, DEVD darp | 99.97 | |
| 3d9h_A | 285 | CDNA FLJ77766, highly similar to HOMO sapiens anky | 99.97 | |
| 2fo1_E | 373 | LIN-12 protein; beta-barrel, protein-DNA complex, | 99.97 | |
| 3utm_A | 351 | Tankyrase-1; tankyrase, TNKS, ankryin repeat clust | 99.97 | |
| 3hra_A | 201 | Ankyrin repeat family protein; structural protein; | 99.97 | |
| 2pnn_A | 273 | Transient receptor potential cation channel subfa | 99.96 | |
| 1awc_B | 153 | Protein (GA binding protein beta 1); complex (tran | 99.96 | |
| 4g8k_A | 337 | 2-5A-dependent ribonuclease; ankyrin-repeat domain | 99.96 | |
| 2etb_A | 256 | Transient receptor potential cation channel subfam | 99.96 | |
| 3kea_A | 285 | K1L; tropism, ANK repeat, viral protein; 2.30A {Va | 99.96 | |
| 1ihb_A | 162 | P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit | 99.96 | |
| 1s70_B | 299 | 130 kDa myosin-binding subunit of smooth muscle my | 99.96 | |
| 1bd8_A | 156 | P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr | 99.96 | |
| 1sw6_A | 327 | Regulatory protein SWI6; transcription regulation, | 99.96 | |
| 4hbd_A | 276 | KN motif and ankyrin repeat domain-containing Pro; | 99.96 | |
| 3jxi_A | 260 | Vanilloid receptor-related osmotically activated p | 99.96 | |
| 3eu9_A | 240 | Huntingtin-interacting protein 14; epigenetics, an | 99.96 | |
| 3f6q_A | 179 | Integrin-linked protein kinase; ILK, integrin-link | 99.96 | |
| 3twr_A | 165 | Tankyrase-2; ankyrin repeat, protein-protein inter | 99.96 | |
| 1sw6_A | 327 | Regulatory protein SWI6; transcription regulation, | 99.96 | |
| 3jxi_A | 260 | Vanilloid receptor-related osmotically activated p | 99.96 | |
| 2pnn_A | 273 | Transient receptor potential cation channel subfa | 99.95 | |
| 2vge_A | 229 | RELA-associated inhibitor; iaspp, nucleus, apoptos | 99.95 | |
| 4hbd_A | 276 | KN motif and ankyrin repeat domain-containing Pro; | 99.95 | |
| 3v30_A | 172 | DNA-binding protein rfxank; structural genomics co | 99.95 | |
| 1bi7_B | 156 | P16INK4A, MTS1, multiple tumor suppressor; cyclin | 99.95 | |
| 1ycs_B | 239 | 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres | 99.95 | |
| 2rfm_A | 192 | Putative ankyrin repeat protein TV1425; ANK repeat | 99.95 | |
| 1awc_B | 153 | Protein (GA binding protein beta 1); complex (tran | 99.94 | |
| 3v31_A | 167 | Ankyrin repeat family A protein 2; structural geno | 99.94 | |
| 1d9s_A | 136 | Cyclin-dependent kinase 4 inhibitor B; helix-turn- | 99.94 | |
| 2y1l_E | 169 | Darpin-8.4; hydrolase-inhibitor complex, DEVD darp | 99.94 | |
| 1ihb_A | 162 | P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit | 99.94 | |
| 3t8k_A | 186 | Uncharacterized protein; structural genomics, PSI- | 99.94 | |
| 1ycs_B | 239 | 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres | 99.94 | |
| 2jab_A | 136 | H10-2-G3; HER2, darpin, ankyrin repeat protein, me | 99.94 | |
| 3twr_A | 165 | Tankyrase-2; ankyrin repeat, protein-protein inter | 99.93 | |
| 3f6q_A | 179 | Integrin-linked protein kinase; ILK, integrin-link | 99.93 | |
| 1n0r_A | 126 | 4ANK, 4 ankyrin repeats; structural protein; 1.50A | 99.93 | |
| 1bi7_B | 156 | P16INK4A, MTS1, multiple tumor suppressor; cyclin | 99.93 | |
| 1d9s_A | 136 | Cyclin-dependent kinase 4 inhibitor B; helix-turn- | 99.92 | |
| 2b0o_E | 301 | UPLC1; arfgap, structural genomics, structural gen | 99.92 | |
| 1bd8_A | 156 | P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr | 99.92 | |
| 3ui2_A | 244 | Signal recognition particle 43 kDa protein, chlor; | 99.92 | |
| 3deo_A | 183 | Signal recognition particle 43 kDa protein; chloro | 99.92 | |
| 2jab_A | 136 | H10-2-G3; HER2, darpin, ankyrin repeat protein, me | 99.91 | |
| 3c5r_A | 137 | BARD-1, BRCA1-associated ring domain protein 1; an | 99.91 | |
| 3c5r_A | 137 | BARD-1, BRCA1-associated ring domain protein 1; an | 99.91 | |
| 3aaa_C | 123 | Myotrophin, protein V-1; actin capping protein, ba | 99.91 | |
| 2aja_A | 376 | Ankyrin repeat family protein; NESG, Q5ZSV0, struc | 99.91 | |
| 3aaa_C | 123 | Myotrophin, protein V-1; actin capping protein, ba | 99.91 | |
| 3ehr_A | 222 | Osteoclast-stimulating factor 1; beta barrel, heli | 99.91 | |
| 3ui2_A | 244 | Signal recognition particle 43 kDa protein, chlor; | 99.9 | |
| 3t8k_A | 186 | Uncharacterized protein; structural genomics, PSI- | 99.9 | |
| 1n0r_A | 126 | 4ANK, 4 ankyrin repeats; structural protein; 1.50A | 99.9 | |
| 2vge_A | 229 | RELA-associated inhibitor; iaspp, nucleus, apoptos | 99.9 | |
| 3deo_A | 183 | Signal recognition particle 43 kDa protein; chloro | 99.9 | |
| 3ehr_A | 222 | Osteoclast-stimulating factor 1; beta barrel, heli | 99.89 | |
| 3jue_A | 368 | Arfgap with coiled-coil, ANK repeat and PH domain | 99.89 | |
| 3lvq_E | 497 | ARF-GAP with SH3 domain, ANK repeat and PH domain | 99.88 | |
| 1dcq_A | 278 | PYK2-associated protein beta; zinc-binding module, | 99.88 | |
| 1n0q_A | 93 | 3ANK, 3 ankyrin repeats; structural protein; 1.26A | 99.86 | |
| 2l6b_A | 115 | NR1C; ankyrin, consensus, repeat protein, ising mo | 99.86 | |
| 1n0q_A | 93 | 3ANK, 3 ankyrin repeats; structural protein; 1.26A | 99.86 | |
| 2b0o_E | 301 | UPLC1; arfgap, structural genomics, structural gen | 99.86 | |
| 3jue_A | 368 | Arfgap with coiled-coil, ANK repeat and PH domain | 99.85 | |
| 2aja_A | 376 | Ankyrin repeat family protein; NESG, Q5ZSV0, struc | 99.85 | |
| 3lvq_E | 497 | ARF-GAP with SH3 domain, ANK repeat and PH domain | 99.84 | |
| 1dcq_A | 278 | PYK2-associated protein beta; zinc-binding module, | 99.83 | |
| 2l6b_A | 115 | NR1C; ankyrin, consensus, repeat protein, ising mo | 99.83 | |
| 2zgd_A | 110 | 3 repeat synthetic ankyrin; ankyrin repeat, hydrox | 99.79 | |
| 2zgd_A | 110 | 3 repeat synthetic ankyrin; ankyrin repeat, hydrox | 99.74 |
| >3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-33 Score=249.60 Aligned_cols=201 Identities=13% Similarity=0.114 Sum_probs=179.7
Q ss_pred CCCCCCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCc
Q 039985 96 TTSPANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHK 175 (357)
Q Consensus 96 ~~~~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~ 175 (357)
..+..|.||||+|+..|+.+++++|++.+.+ .+..+..|.| |||+|+..|+.+++++|+++|++++
T Consensus 6 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-------~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~g~~~~------ 71 (237)
T 3b7b_A 6 MEHQNKRSPLHAAAEAGHVDICHMLVQAGAN-------IDTCSEDQRT-PLMEAAENNHLEAVKYLIKAGALVD------ 71 (237)
T ss_dssp CSSCCSCCHHHHHHHHTCHHHHHHHHHTTCC-------TTCCCTTCCC-HHHHHHHTTCHHHHHHHHTTTCCCC------
T ss_pred cccCCCCCHHHHHHHcCcHHHHHHHHHcCCC-------cCccCCCCCC-HHHHHHHhCCHHHHHHHHhCCCCCC------
Confidence 3455699999999999999999999999988 7778999999 9999999999999999999999887
Q ss_pred cCCCcCcchHHHHHHHCCCHHHHHHHHhhC-CCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccC
Q 039985 176 KDKNWAIRLTLLFAASNGITEILKEIIHQH-PQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDK 254 (357)
Q Consensus 176 ~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~-~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~ 254 (357)
.++..|.||||+|+..|+.+++++|++++ .++. ..|..|+||||+|+..|+.+++++|++ .+.+++.+|.
T Consensus 72 -~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~---~~~~~g~t~L~~A~~~~~~~~~~~Ll~-----~g~~~~~~~~ 142 (237)
T 3b7b_A 72 -PKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVN---CQDDGGWTPMIWATEYKHVDLVKLLLS-----KGSDINIRDN 142 (237)
T ss_dssp -CCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTT---CCCTTSCCHHHHHHHTTCHHHHHHHHH-----TTCCTTCCCT
T ss_pred -CCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcc---cCCCCCCCHHHHHHHcCCHHHHHHHHH-----CCCCCCccCC
Confidence 55666999999999999999999999999 5555 899999999999999999999999998 6789999999
Q ss_pred CCCcHHHHHHHcCCCCC--------------CCCCCChhHHHHHhhhHHHHHHhccC-cccccccccCCCCHHHHHhhhh
Q 039985 255 KGYTLLHHVADMKHYKE--------------GTRPGPVLQFQEELQLFEHVKEIMPR-HYAMHRDEKNKMTASDLFNLTH 319 (357)
Q Consensus 255 ~G~TpLh~Aa~~g~~~~--------------~~~~~t~L~la~~l~~~~~v~~ll~~-~~~~~~n~~g~~Tp~dl~~~~~ 319 (357)
.|.||||+|+..|+.+. ...+.|||++|...+..+.++.++.. .+.+.+|++|+ ||+++|....
T Consensus 143 ~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~-t~l~~A~~~~ 221 (237)
T 3b7b_A 143 EENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGE-TPLQCASLNS 221 (237)
T ss_dssp TSCCHHHHHHHHCCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSC-CHHHHSCTTC
T ss_pred CCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCCccCCCCC-CHHHHHHHHH
Confidence 99999999999998551 23456999999999999988888854 58889999999 9999998655
Q ss_pred H
Q 039985 320 E 320 (357)
Q Consensus 320 ~ 320 (357)
+
T Consensus 222 ~ 222 (237)
T 3b7b_A 222 Q 222 (237)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-34 Score=259.32 Aligned_cols=207 Identities=13% Similarity=0.032 Sum_probs=163.9
Q ss_pred CCCCCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCcc
Q 039985 97 TSPANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKK 176 (357)
Q Consensus 97 ~~~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~ 176 (357)
.+..|.||||+||..|+.+++++|++.++.. . ..+..+..|.| |||+|+..|+.++|++|+++|++++
T Consensus 5 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~---~~~~~~~~g~t-~L~~A~~~g~~~~v~~Ll~~ga~~~------- 72 (282)
T 1oy3_D 5 VTEDGDTALHLAVIHQHEPFLDFLLGFSAGH-E---YLDLQNDLGQT-ALHLAAILGEASTVEKLYAAGAGVL------- 72 (282)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHHHHHTTS-G---GGGCCCTTSCC-HHHHHHHHTCHHHHHHHHHTTCCSS-------
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHhcCCCc-c---cccccCCCCCC-HHHHHHHcCCHHHHHHHHHcCCCCC-------
Confidence 3456999999999999999999999987751 0 14568899999 9999999999999999999999987
Q ss_pred CCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcc--------------------------------------------ccc
Q 039985 177 DKNWAIRLTLLFAASNGITEILKEIIHQHPQAI--------------------------------------------LLD 212 (357)
Q Consensus 177 ~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~--------------------------------------------~~~ 212 (357)
.++..|+||||+|+..|+.+++++|++++++.. .++
T Consensus 73 ~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (282)
T 1oy3_D 73 VAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLE 152 (282)
T ss_dssp CCCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTT
T ss_pred CCCCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCC
Confidence 556679999999999999999999999887621 013
Q ss_pred ccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCC-CCcHHHHHHHcCCCCC--------------CCCCCC
Q 039985 213 NLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKK-GYTLLHHVADMKHYKE--------------GTRPGP 277 (357)
Q Consensus 213 ~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~-G~TpLh~Aa~~g~~~~--------------~~~~~t 277 (357)
.+|..|+||||+|+..|+.+++++|++ .+.+++.++.. |+||||+|+..|+.+. ...+.|
T Consensus 153 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~-----~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t 227 (282)
T 1oy3_D 153 AENYDGHTPLHVAVIHKDAEMVRLLRD-----AGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRT 227 (282)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHH-----HTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred CcCCCCcCHHHHHHHcCCHHHHHHHHH-----cCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCC
Confidence 778999999999999999999999998 67889999854 9999999999998551 234559
Q ss_pred hhHHHHHhhhHHHHHHhcc-CcccccccccCCCCHHHHHhhhhHH
Q 039985 278 VLQFQEELQLFEHVKEIMP-RHYAMHRDEKNKMTASDLFNLTHED 321 (357)
Q Consensus 278 ~L~la~~l~~~~~v~~ll~-~~~~~~~n~~g~~Tp~dl~~~~~~~ 321 (357)
||++|...+..+.++.|+. +.+.+.+|.+|. ||++.+......
T Consensus 228 pL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~-tpl~~a~~~~~~ 271 (282)
T 1oy3_D 228 PLGSALLRPNPILARLLRAHGAPEPEDGGDKL-SPCSSSGSDSDS 271 (282)
T ss_dssp HHHHHHTSSCHHHHHHHHHTTCCCCCCC-----------------
T ss_pred HHHHHHHcCCcHHHHHHHHcCCCcCcCCCccc-ccccccCCcccc
Confidence 9999999999888888884 458899999999 999999765543
|
| >1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-34 Score=256.85 Aligned_cols=202 Identities=12% Similarity=0.130 Sum_probs=150.1
Q ss_pred CCCCCCCCHHHHHHhcC-------------CHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHH
Q 039985 96 TTSPANISTISLGLGKG-------------NMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFV 162 (357)
Q Consensus 96 ~~~~~g~t~Lh~A~~~g-------------~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll 162 (357)
..+..|.||||+|+..| +.++++.|++.+++ .....|..|.| |||+|+..|+.++|++|+
T Consensus 5 ~~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~------~~~~~d~~g~t-~L~~A~~~g~~~~v~~Ll 77 (253)
T 1yyh_A 5 VRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGAS------LHNQTDRTGET-ALHLAARYSRSDAAKRLL 77 (253)
T ss_dssp -----------------------------------------------------CCCTTSCC-HHHHHHHTTCHHHHHHHH
T ss_pred CCCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCC------cccccCCCCCc-HHHHHHHcCCHHHHHHHH
Confidence 34556999999999988 89999999999987 12345899999 999999999999999999
Q ss_pred HcCCCCCCCCCCccCCCcCcchHHHHHHHCCCHHHHHHHHhhCC-CcccccccCCCCChHHHHHHHcCCHHHHHHHHhhh
Q 039985 163 KKDCTIKGVPNHKKDKNWAIRLTLLFAASNGITEILKEIIHQHP-QAILLDNLNEKEQNILHVAVKRRQYKVFELITKEM 241 (357)
Q Consensus 163 ~~g~~~~~~~~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~-~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~ 241 (357)
++|++++ .+|..|+||||+|+..|+.+++++|+++++ ++. .+|..|+||||+|+..|+.+++++|++
T Consensus 78 ~~g~~~~-------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~---~~~~~g~t~L~~A~~~~~~~~v~~Ll~-- 145 (253)
T 1yyh_A 78 EASADAN-------IQDNMGRTPLHAAVSADAQGVFQILIRNRATDLD---ARMHDGTTPLILAARLAVEGMLEDLIN-- 145 (253)
T ss_dssp HTTCCTT-------CCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTT---CCCTTCCCHHHHHHHHTCSSHHHHHHH--
T ss_pred HcCCCCC-------CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcc---ccCCCCCcHHHHHHHcChHHHHHHHHH--
Confidence 9999987 566679999999999999999999999998 555 899999999999999999999999998
Q ss_pred ccCCccccccccCCCCcHHHHHHHcCCCCC--------------CCCCCChhHHHHHhhhHHHHHHhccC-ccccccccc
Q 039985 242 QLSVPKWASRIDKKGYTLLHHVADMKHYKE--------------GTRPGPVLQFQEELQLFEHVKEIMPR-HYAMHRDEK 306 (357)
Q Consensus 242 ~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~--------------~~~~~t~L~la~~l~~~~~v~~ll~~-~~~~~~n~~ 306 (357)
.+.+++.+|..|+||||+|+..|+.+. ...+.|||++|...+..+.++.++.. .+.+.+|..
T Consensus 146 ---~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~ 222 (253)
T 1yyh_A 146 ---SHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHM 222 (253)
T ss_dssp ---TTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT
T ss_pred ---cCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccC
Confidence 678999999999999999999998551 23456999999999999999888854 588899999
Q ss_pred CCCCHHHHHhhhhH
Q 039985 307 NKMTASDLFNLTHE 320 (357)
Q Consensus 307 g~~Tp~dl~~~~~~ 320 (357)
|+ ||+++|.+...
T Consensus 223 g~-tpl~~A~~~g~ 235 (253)
T 1yyh_A 223 DR-LPRDIAQERMH 235 (253)
T ss_dssp CC-CHHHHHHHTTC
T ss_pred CC-CHHHHHHHcCC
Confidence 99 99999976443
|
| >3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-32 Score=244.52 Aligned_cols=200 Identities=16% Similarity=0.102 Sum_probs=176.2
Q ss_pred CCCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCC
Q 039985 99 PANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDK 178 (357)
Q Consensus 99 ~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~ 178 (357)
..+.+|||.|+..|+.+.++.|++.++.. .+..+..|.| |||+|+..|+.+++++|+++|++++ .+
T Consensus 4 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~------~~~~~~~g~t-~L~~A~~~g~~~~v~~Ll~~g~~~~-------~~ 69 (231)
T 3aji_A 4 CVSNIMICNLAYSGKLDELKERILADKSL------ATRTDQDSRT-ALHWACSAGHTEIVEFLLQLGVPVN-------DK 69 (231)
T ss_dssp CCSSSHHHHHHHHTCHHHHHHHHHHCGGG------GGCCCTTSCC-HHHHHHHHTCHHHHHHHHHTTCCSC-------CC
T ss_pred ccccchHHHHHHhCCHHHHHHHHHhchhh------hhcCCCCCCC-HHHHHHHcCcHHHHHHHHHhCCCCC-------Cc
Confidence 34789999999999999999999987751 4567899999 9999999999999999999999887 55
Q ss_pred CcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCc
Q 039985 179 NWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYT 258 (357)
Q Consensus 179 ~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~T 258 (357)
+..|.||||+|+..|+.+++++|+++|+++. .+|..|+||||+|+..|+.+++++|++ .+.+++.+|..|.|
T Consensus 70 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---~~~~~g~t~L~~A~~~~~~~~~~~Ll~-----~g~~~~~~~~~g~t 141 (231)
T 3aji_A 70 DDAGWSPLHIAASAGXDEIVKALLVKGAHVN---AVNQNGCTPLHYAASKNRHEIAVMLLE-----GGANPDAKDHYDAT 141 (231)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT---CCCTTSCCHHHHHHHTTCHHHHHHHHH-----TTCCTTCCCTTSCC
T ss_pred CCCCCCHHHHHHHcCHHHHHHHHHHcCCCCC---CCCCCCCCHHHHHHHcCCHHHHHHHHH-----cCCCCCCcCCCCCc
Confidence 6669999999999999999999999999998 899999999999999999999999988 67889999999999
Q ss_pred HHHHHHHcCCCCC--------------CCCCCChhHHHHHhhhHHHHHHhcc-CcccccccccCCCCHHHHHhhhhHH
Q 039985 259 LLHHVADMKHYKE--------------GTRPGPVLQFQEELQLFEHVKEIMP-RHYAMHRDEKNKMTASDLFNLTHED 321 (357)
Q Consensus 259 pLh~Aa~~g~~~~--------------~~~~~t~L~la~~l~~~~~v~~ll~-~~~~~~~n~~g~~Tp~dl~~~~~~~ 321 (357)
|||+|+..|+.+. ...+.|||++|...+..+.++.++. +.+.+.+|..|+ ||+++|...+..
T Consensus 142 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~-t~l~~A~~~~~~ 218 (231)
T 3aji_A 142 AMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEK-TPLQVAKGGLGL 218 (231)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSC-CHHHHSCHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCC-CHHHHHHhhHHH
Confidence 9999999998551 2345599999999999888888884 457889999999 999999765543
|
| >3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-33 Score=255.38 Aligned_cols=198 Identities=11% Similarity=0.025 Sum_probs=177.5
Q ss_pred CCCCCCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCc
Q 039985 96 TTSPANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHK 175 (357)
Q Consensus 96 ~~~~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~ 175 (357)
..+..|.||||+|+..|+.++++.|++.+.+ .+..|..|.| |||+|+..|+.++|++|+++|++++
T Consensus 54 ~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~-------~~~~~~~g~t-~L~~A~~~g~~~~v~~Ll~~ga~~~------ 119 (285)
T 3d9h_A 54 GDAVSDWSPMHEAAIHGHQLSLRNLISQGWA-------VNIITADHVS-PLHEACLGGHLSCVKILLKHGAQVN------ 119 (285)
T ss_dssp SSSCCSCCHHHHHHHTTCHHHHHHHHHTTCC-------SCEECTTCCC-HHHHHHHTTCHHHHHHHHHTTCCSS------
T ss_pred CCCccCCCHHHHHHHcCCHHHHHHHHHCCCC-------CCCcCCCCCC-HHHHHHHCCcHHHHHHHHHCCCCCC------
Confidence 3455699999999999999999999999988 7788999999 9999999999999999999999987
Q ss_pred cCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCC
Q 039985 176 KDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKK 255 (357)
Q Consensus 176 ~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~ 255 (357)
.+|..|.||||+|+..|+.+++++|+++|+++. . +..|+||||+|+..|+.+++++|++ .+.+++.+|..
T Consensus 120 -~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---~-~~~g~t~L~~A~~~g~~~~v~~Ll~-----~g~~~~~~d~~ 189 (285)
T 3d9h_A 120 -GVTADWHTPLFNACVSGSWDCVNLLLQHGASVQ---P-ESDLASPIHEAARRGHVECVNSLIA-----YGGNIDHKISH 189 (285)
T ss_dssp -CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSS---C-SCTTSCHHHHHHHHTCHHHHHHHHH-----TTCCTTCCBTT
T ss_pred -CCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCC---C-CCCCCCHHHHHHHcCCHHHHHHHHH-----CCCCCCCcCCC
Confidence 566679999999999999999999999999987 4 4459999999999999999999998 67899999999
Q ss_pred CCcHHHHHHHcCCCCC-------------CCCCCChhHHHHHhhhHHHHHHhcc-CcccccccccCCCCHHHHHhhh
Q 039985 256 GYTLLHHVADMKHYKE-------------GTRPGPVLQFQEELQLFEHVKEIMP-RHYAMHRDEKNKMTASDLFNLT 318 (357)
Q Consensus 256 G~TpLh~Aa~~g~~~~-------------~~~~~t~L~la~~l~~~~~v~~ll~-~~~~~~~n~~g~~Tp~dl~~~~ 318 (357)
|.||||+|+..|+.+. ...+.|||++|...+..+.++.++. +.+.+.+|.+|+ ||+++|...
T Consensus 190 g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~-t~l~~A~~~ 265 (285)
T 3d9h_A 190 LGTPLYLACENQQRACVKKLLESGADVNQGKGQDSPLHAVVRTASEELACLLMDFGADTQAKNAEGK-RPVELVPPE 265 (285)
T ss_dssp TBCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSC-CGGGGSCTT
T ss_pred CCCHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCC-CHHHHhcCc
Confidence 9999999999998551 2344599999999999988888884 458899999999 999999843
|
| >1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-33 Score=246.66 Aligned_cols=199 Identities=14% Similarity=0.103 Sum_probs=175.1
Q ss_pred CCCCCCCHHHHHHhcCCHHHHHHHHh----cCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCC
Q 039985 97 TSPANISTISLGLGKGNMLKAKKLVD----FSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVP 172 (357)
Q Consensus 97 ~~~~g~t~Lh~A~~~g~~~~vk~Ll~----~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~ 172 (357)
.+..|.||||+||..|+.++++.|++ .+.. .+..|..|.| |||+|+..|+.+++++|+++|++++
T Consensus 5 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~-------~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~g~~~~--- 73 (241)
T 1k1a_A 5 ADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRE-------LDIYNNLRQT-PLHLAVITTLPSVVRLLVTAGASPM--- 73 (241)
T ss_dssp --CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCC-------SCCCCTTSCC-HHHHHHHTTCHHHHHHHHHTTCCTT---
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCC-------CCcccccCCC-HHHHHHHcCCHHHHHHHHHcCCCcc---
Confidence 34569999999999999999999997 4555 6678899999 9999999999999999999999987
Q ss_pred CCccCCCcCcchHHHHHHHCCCHHHHHHHHhhCC----CcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccc
Q 039985 173 NHKKDKNWAIRLTLLFAASNGITEILKEIIHQHP----QAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKW 248 (357)
Q Consensus 173 ~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~----~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~ 248 (357)
.++..|.||||+|+..|+.+++++|+++++ ++. ..|..|+||||+|+..|+.+++++|++ .+.+
T Consensus 74 ----~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~---~~~~~g~t~L~~A~~~~~~~~~~~Ll~-----~g~~ 141 (241)
T 1k1a_A 74 ----ALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLE---ARNYDGLTALHVAVNTECQETVQLLLE-----RGAD 141 (241)
T ss_dssp ----CCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTT---CCCTTSCCHHHHHHHHTCHHHHHHHHH-----TTCC
T ss_pred ----ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccc---ccCcCCCcHHHHHHHcCCHHHHHHHHH-----cCCC
Confidence 556669999999999999999999999998 665 889999999999999999999999998 6788
Q ss_pred ccccc-CCCCcHHHHHHHcCCCCC--------------CCCCCChhHHHHHhhhHHHHHHhcc-CcccccccccCCCCHH
Q 039985 249 ASRID-KKGYTLLHHVADMKHYKE--------------GTRPGPVLQFQEELQLFEHVKEIMP-RHYAMHRDEKNKMTAS 312 (357)
Q Consensus 249 ~~~~d-~~G~TpLh~Aa~~g~~~~--------------~~~~~t~L~la~~l~~~~~v~~ll~-~~~~~~~n~~g~~Tp~ 312 (357)
++.+| ..|.||||+|+..|+.+. ...+.|||++|...+..+.++.++. +.+.+.+|..|+ ||+
T Consensus 142 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~-tpl 220 (241)
T 1k1a_A 142 IDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHND-TPL 220 (241)
T ss_dssp TTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSC-CTT
T ss_pred cccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCC-CHH
Confidence 99888 889999999999998551 2345599999999999999998885 458889999999 999
Q ss_pred HHHhhhh
Q 039985 313 DLFNLTH 319 (357)
Q Consensus 313 dl~~~~~ 319 (357)
++|.+..
T Consensus 221 ~~A~~~~ 227 (241)
T 1k1a_A 221 MVARSRR 227 (241)
T ss_dssp TTCSSHH
T ss_pred HHHHhcC
Confidence 9997544
|
| >1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-32 Score=248.00 Aligned_cols=196 Identities=15% Similarity=0.095 Sum_probs=176.0
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCc
Q 039985 101 NISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNW 180 (357)
Q Consensus 101 g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~ 180 (357)
|.||||+|+..|+.+++++|++.+++ .+..+..|.| |||+|+..|+.+++++|+++|++++ .++.
T Consensus 39 g~t~L~~A~~~g~~~~v~~Ll~~g~~-------~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~g~~~~-------~~~~ 103 (285)
T 1wdy_A 39 GWTPLHNAVQMSREDIVELLLRHGAD-------PVLRKKNGAT-PFLLAAIAGSVKLLKLFLSKGADVN-------ECDF 103 (285)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCC-------TTCCCTTCCC-HHHHHHHHTCHHHHHHHHHTTCCTT-------CBCT
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCC-------CcccCCCCCC-HHHHHHHcCCHHHHHHHHHcCCCCC-------ccCc
Confidence 77999999999999999999999998 7778999999 9999999999999999999999987 5566
Q ss_pred CcchHHHHHHHCCCHHHHHHHHhhCCCccccccc----------CCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccc
Q 039985 181 AIRLTLLFAASNGITEILKEIIHQHPQAILLDNL----------NEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWAS 250 (357)
Q Consensus 181 ~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~----------d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~ 250 (357)
.|.||||+|+..|+.+++++|+++|+++. .. +..|.||||+|+..|+.+++++|++. .+.+++
T Consensus 104 ~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~---~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~----~~~~~~ 176 (285)
T 1wdy_A 104 YGFTAFMEAAVYGKVKALKFLYKRGANVN---LRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDE----MGADVN 176 (285)
T ss_dssp TCCBHHHHHHHTTCHHHHHHHHHTTCCTT---CCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHT----SCCCTT
T ss_pred ccCCHHHHHHHhCCHHHHHHHHHhCCCcc---cccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHh----cCCCCC
Confidence 79999999999999999999999999987 55 78899999999999999999999984 478999
Q ss_pred cccCCCCcHHHHHHHcCCCC------------------CCCCCCChhHHHHHhhhHHHHHHhcc--CcccccccccCCCC
Q 039985 251 RIDKKGYTLLHHVADMKHYK------------------EGTRPGPVLQFQEELQLFEHVKEIMP--RHYAMHRDEKNKMT 310 (357)
Q Consensus 251 ~~d~~G~TpLh~Aa~~g~~~------------------~~~~~~t~L~la~~l~~~~~v~~ll~--~~~~~~~n~~g~~T 310 (357)
.+|..|+||||+|+..++.. ....+.|||++|...+..+.++.++. +.+.+.+|.+|+ |
T Consensus 177 ~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~~g~-t 255 (285)
T 1wdy_A 177 ACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGK-T 255 (285)
T ss_dssp CCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSC-C
T ss_pred ccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhccCCCccccCCCCC-c
Confidence 99999999999999999832 12345599999999999999999985 347889999999 9
Q ss_pred HHHHHhhhh
Q 039985 311 ASDLFNLTH 319 (357)
Q Consensus 311 p~dl~~~~~ 319 (357)
|+++|....
T Consensus 256 ~l~~A~~~~ 264 (285)
T 1wdy_A 256 ALLLAVELK 264 (285)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHcC
Confidence 999997643
|
| >2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-33 Score=245.21 Aligned_cols=198 Identities=15% Similarity=0.098 Sum_probs=171.1
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCc
Q 039985 101 NISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNW 180 (357)
Q Consensus 101 g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~ 180 (357)
|.||||+|+..|+.++++.|++.++.. ....|..|.| |||+|+..|+.+++++|+++|++.+.. . .++.
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~------~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~~~~~~~~-~---~~~~ 70 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKPSL------LLQKDQDGRI-PLHWSVSFQAHEITSFLLSKMENVNLD-D---YPDD 70 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCGGG------TTCCCTTSCC-HHHHHHHTTCHHHHHHHHHTCTTCCGG-G---CCCT
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCccc------cccCCCCCCC-HHHHHHHcCCHHHHHHHHhcccccccc-c---cCCC
Confidence 789999999999999999999998871 2347899999 999999999999999999999544311 1 1455
Q ss_pred CcchHHHHHHHCCCHHHHHHHHhhC--CCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCc
Q 039985 181 AIRLTLLFAASNGITEILKEIIHQH--PQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYT 258 (357)
Q Consensus 181 ~G~TpLh~Aa~~G~~~iv~~Ll~~~--~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~T 258 (357)
.|.||||+|+..|+.+++++|+++| +++. .+|..|+||||+|+..|+.+++++|++ .+.+++.+|..|+|
T Consensus 71 ~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~---~~~~~g~t~L~~A~~~~~~~~~~~Ll~-----~g~~~~~~~~~g~t 142 (228)
T 2dzn_A 71 SGWTPFHIACSVGNLEVVKSLYDRPLKPDLN---KITNQGVTCLHLAVGKKWFEVSQFLIE-----NGASVRIKDKFNQI 142 (228)
T ss_dssp TSCCHHHHHHHHCCHHHHHHHHSSSSCCCTT---CCCTTCCCHHHHHHHTTCHHHHHHHHH-----TTCCSCCCCTTSCC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhCCCCcccc---cCCcCCCCHHHHHHHcCCHhHHHHHHH-----cCCCccccCCCCCC
Confidence 6999999999999999999999998 7777 889999999999999999999999998 67899999999999
Q ss_pred HHHHHHHcCCCCC---------------CCCCCChhHHHHHhhhHHHHHHhc-c-CcccccccccCCCCHHHHHhhh
Q 039985 259 LLHHVADMKHYKE---------------GTRPGPVLQFQEELQLFEHVKEIM-P-RHYAMHRDEKNKMTASDLFNLT 318 (357)
Q Consensus 259 pLh~Aa~~g~~~~---------------~~~~~t~L~la~~l~~~~~v~~ll-~-~~~~~~~n~~g~~Tp~dl~~~~ 318 (357)
|||+|+..|+.+. ...+.|||++|...+..+.++.++ . +.+.+.+|.+|+ ||+++|.+.
T Consensus 143 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~~g~-t~l~~A~~~ 218 (228)
T 2dzn_A 143 PLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGA-KAEDVALNE 218 (228)
T ss_dssp HHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBCTTSC-BGGGGCSST
T ss_pred HHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCC-cHHHHHHHH
Confidence 9999999997541 234559999999999999999888 3 458899999999 999999754
|
| >1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-33 Score=270.40 Aligned_cols=199 Identities=12% Similarity=0.091 Sum_probs=166.0
Q ss_pred CCCCCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCcc
Q 039985 97 TSPANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKK 176 (357)
Q Consensus 97 ~~~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~ 176 (357)
.+..|.||||+|+..|+.+++++|++.+.. ....+..|.| |||+|+..|+.+++++|++.|++++
T Consensus 175 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-------~~~~~~~g~t-~L~~A~~~~~~~~~~~Ll~~g~~~~------- 239 (437)
T 1n11_A 175 AGKNGLTPLHVAVHHNNLDIVKLLLPRGGS-------PHSPAWNGYT-PLHIAAKQNQVEVARSLLQYGGSAN------- 239 (437)
T ss_dssp CCSSCCCHHHHHHHTTCHHHHHHHGGGTCC-------SCCCCTTCCC-HHHHHHHTTCHHHHHHHHHTTCCTT-------
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHhCCCC-------CCCcCCCCCC-HHHHHHHcCCHHHHHHHHHcCCCCC-------
Confidence 344577777777777777777777777776 5566778888 8888888888888888888888766
Q ss_pred CCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCC
Q 039985 177 DKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKG 256 (357)
Q Consensus 177 ~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G 256 (357)
.++..|.||||+|+..|+.++|++|++++++.+ ..|..|+||||+|+..|+.+++++|++ .+.+++.+|..|
T Consensus 240 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~---~~~~~g~t~L~~A~~~~~~~~~~~Ll~-----~g~~~~~~~~~g 311 (437)
T 1n11_A 240 AESVQGVTPLHLAAQEGHAEMVALLLSKQANGN---LGNKSGLTPLHLVAQEGHVPVADVLIK-----HGVMVDATTRMG 311 (437)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTT---CCCTTCCCHHHHHHHHTCHHHHHHHHH-----HTCCTTCCCSSC
T ss_pred CCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCC---CCCCCCCCHHHHHHHcCCHHHHHHHHh-----CCccCCCCCCCC
Confidence 455568999999999999999999999999988 889999999999999999999999988 578899999999
Q ss_pred CcHHHHHHHcCCCCC--------------CCCCCChhHHHHHhhhHHHHHHhcc-CcccccccccCCCCHHHHHhhhh
Q 039985 257 YTLLHHVADMKHYKE--------------GTRPGPVLQFQEELQLFEHVKEIMP-RHYAMHRDEKNKMTASDLFNLTH 319 (357)
Q Consensus 257 ~TpLh~Aa~~g~~~~--------------~~~~~t~L~la~~l~~~~~v~~ll~-~~~~~~~n~~g~~Tp~dl~~~~~ 319 (357)
+||||+|+..|+.+. ...+.|||++|...+..+.|+.|+. +.+.+.+|.+|+ ||+++|.+..
T Consensus 312 ~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~-t~l~~A~~~g 388 (437)
T 1n11_A 312 YTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGT-TPLAIAKRLG 388 (437)
T ss_dssp CCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCSSSC-CHHHHHHHTT
T ss_pred CCHHHHHHHcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHCChHHHHHHHHHCcCCCCCCCCCCC-CHHHHHHHcC
Confidence 999999999998652 2344599999999998888888884 458888999999 9999997644
|
| >4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-32 Score=233.82 Aligned_cols=143 Identities=20% Similarity=0.242 Sum_probs=137.0
Q ss_pred CHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCcCc
Q 039985 103 STISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNWAI 182 (357)
Q Consensus 103 t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~G 182 (357)
++|+.||+.|+.++|+.|++.+++ ++..|.+|.| |||+|+..++.+++++|+++|++++ .+|..|
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gad-------vn~~d~~g~t-~l~~a~~~~~~~~~~~ll~~gad~~-------~~d~~g 70 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGAD-------VNASDSDGRT-PLHHAAENGHKEVVKLLISKGADVN-------AKDSDG 70 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCC-------TTCCCTTSCC-HHHHHHHTTCHHHHHHHHHTTCCTT-------CCCTTS
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCC-------CCCcCCCCCC-HHHHHHHcCCHHHHHHHHhcccchh-------hhccCC
Confidence 479999999999999999999998 7889999999 9999999999999999999999987 666679
Q ss_pred chHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcHHHH
Q 039985 183 RLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTLLHH 262 (357)
Q Consensus 183 ~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLh~ 262 (357)
+||||+||..|+.++|++|+++|++++ .+|.+|+||||+|+..|+.++|++|++ .+++++.+|.+|+||||+
T Consensus 71 ~TpLh~A~~~g~~~~v~~Ll~~gadvn---~~d~~G~TpLh~A~~~g~~~~v~~Ll~-----~gad~~~~d~~G~TpL~~ 142 (169)
T 4gpm_A 71 RTPLHHAAENGHKEVVKLLISKGADVN---AKDSDGRTPLHHAAENGHKEVVKLLIS-----KGADVNTSDSDGRTPLDL 142 (169)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTT---CCCTTSCCHHHHHHHTTCHHHHHHHHH-----TTCCTTCCCTTSCCHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHCcCCCC---CCCCCCCCHHHHHHHcCCHHHHHHHHH-----cCCCccccCCCCCCHHHH
Confidence 999999999999999999999999998 999999999999999999999999998 788999999999999999
Q ss_pred HHHcCC
Q 039985 263 VADMKH 268 (357)
Q Consensus 263 Aa~~g~ 268 (357)
|++.|+
T Consensus 143 A~~~g~ 148 (169)
T 4gpm_A 143 AREHGN 148 (169)
T ss_dssp HHHTTC
T ss_pred HHHcCC
Confidence 999997
|
| >4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-33 Score=256.42 Aligned_cols=150 Identities=16% Similarity=0.156 Sum_probs=129.2
Q ss_pred CCCCCCCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCC
Q 039985 95 STTSPANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNH 174 (357)
Q Consensus 95 ~~~~~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~ 174 (357)
+..+..|.||||+|+..|+.+++++|++.+++ ....+..|.| |+|+|+..++.+++++|+++|++++
T Consensus 80 n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~-------~~~~~~~g~t-~l~~a~~~~~~~~~~~Ll~~g~~~n----- 146 (269)
T 4b93_B 80 NVTSQDGSSPLHVAALHGRADLIPLLLKHGAN-------AGARNADQAV-PLHLACQQGHFQVVKCLLDSNAKPN----- 146 (269)
T ss_dssp TCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCC-------TTCCCTTCCC-HHHHHHHHTCHHHHHHHHHTTCCSC-----
T ss_pred CCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCC-------cCccCCCCCC-ccccccccChHHHHHHHHHCCCCCC-----
Confidence 34455688999999999999999999988887 6778888898 9999999999999999999988877
Q ss_pred ccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccC
Q 039985 175 KKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDK 254 (357)
Q Consensus 175 ~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~ 254 (357)
.+|..|+||||+||..|+.++|++|+++|++++ .+|..|+||||+||.+|+.++|++|++ .|++++.+|.
T Consensus 147 --~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn---~~~~~g~t~Lh~A~~~g~~~~v~~Ll~-----~Gad~~~~d~ 216 (269)
T 4b93_B 147 --KKDLSGNTPLIYACSGGHHELVALLLQHGASIN---ASNNKGNTALHEAVIEKHVFVVELLLL-----HGASVQVLNK 216 (269)
T ss_dssp --CCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTT---CBCTTSCBHHHHHHHTTCHHHHHHHHH-----TTCCSCCCCT
T ss_pred --CCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCC---ccccCCCcHHHHHHHcCCHHHHHHHHH-----CCCCCCCcCC
Confidence 556668999999999999999999999998888 888899999999999999999999987 6788889999
Q ss_pred CCCcHHHHHHHcC
Q 039985 255 KGYTLLHHVADMK 267 (357)
Q Consensus 255 ~G~TpLh~Aa~~g 267 (357)
+|+||||+|+++|
T Consensus 217 ~G~TpL~~A~~~~ 229 (269)
T 4b93_B 217 RQRTAVDCAEQNS 229 (269)
T ss_dssp TSCCSGGGSCTTC
T ss_pred CCCCHHHHHHhCC
Confidence 9999999988766
|
| >3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-32 Score=253.09 Aligned_cols=206 Identities=16% Similarity=0.136 Sum_probs=178.2
Q ss_pred CCCCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccC
Q 039985 98 SPANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKD 177 (357)
Q Consensus 98 ~~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~ 177 (357)
+..|.||||+|+..|+.+++++|++.+++ .+..|..|.| |||+|+..|+.+++++|+++|++++ .
T Consensus 55 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-------~~~~~~~g~t-~L~~A~~~g~~~iv~~Ll~~g~~~~-------~ 119 (351)
T 3utm_A 55 DGRKSTPLHLAAGYNRVRIVQLLLQHGAD-------VHAKDKGGLV-PLHNACSYGHYEVTELLLKHGACVN-------A 119 (351)
T ss_dssp STTCCCHHHHHHHTTCHHHHHHHHHTTCC-------TTCCCTTCCC-HHHHHHHTTCHHHHHHHHHTTCCTT-------C
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCC-------CCccCCCCCc-HHHHHHHCCCHHHHHHHHHCCCCCC-------C
Confidence 44599999999999999999999999998 7788999999 9999999999999999999999987 5
Q ss_pred CCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccc----------------------------------------------
Q 039985 178 KNWAIRLTLLFAASNGITEILKEIIHQHPQAILL---------------------------------------------- 211 (357)
Q Consensus 178 ~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~---------------------------------------------- 211 (357)
+|..|.||||+|+..|+.+++++|+++|+++...
T Consensus 120 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 199 (351)
T 3utm_A 120 MDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLA 199 (351)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTT
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHH
Confidence 5666999999999999999999999999987610
Q ss_pred -----cccCCCCChHHHHHHHc---CCHHHHHHHHhhhccCCccccccccCCCCcHHHHHHHcCCCCC------------
Q 039985 212 -----DNLNEKEQNILHVAVKR---RQYKVFELITKEMQLSVPKWASRIDKKGYTLLHHVADMKHYKE------------ 271 (357)
Q Consensus 212 -----~~~d~~G~TpLh~A~~~---g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~------------ 271 (357)
...+..|+||||+|+.. +..+++++|++ .+.+++.+|.+|+||||+|+..|+.+.
T Consensus 200 ~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~-----~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n 274 (351)
T 3utm_A 200 LEIINFKQPQSHETALHCAVASLHPKRKQVAELLLR-----KGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMN 274 (351)
T ss_dssp TCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHH-----TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred hhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHH-----cCCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC
Confidence 02346678999999999 55799999988 688999999999999999999998651
Q ss_pred --CCCCCChhHHHHHhhhHHHHHHhcc-CcccccccccCCCCHHHHHhhhhHHHHH
Q 039985 272 --GTRPGPVLQFQEELQLFEHVKEIMP-RHYAMHRDEKNKMTASDLFNLTHEDQLR 324 (357)
Q Consensus 272 --~~~~~t~L~la~~l~~~~~v~~ll~-~~~~~~~n~~g~~Tp~dl~~~~~~~~~~ 324 (357)
...+.|||++|...+..+.++.|+. +.+.+.+|.+|. ||++++.+...+.+.
T Consensus 275 ~~d~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~-tal~~a~~~~~~~l~ 329 (351)
T 3utm_A 275 ALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSIISLQGF-TAAQMGNEAVQQILS 329 (351)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSC-CHHHHSCHHHHHHHH
T ss_pred CcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCC-ChhhhhhHHHHHHHH
Confidence 2345599999999999999998885 458899999999 999999665555444
|
| >2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-32 Score=242.31 Aligned_cols=179 Identities=16% Similarity=0.169 Sum_probs=159.6
Q ss_pred CCCCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCC-CCCCCCCCcc
Q 039985 98 SPANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDC-TIKGVPNHKK 176 (357)
Q Consensus 98 ~~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~-~~~~~~~~~~ 176 (357)
+..|.||||+|+..|+.+++++|++.+++ .+..|..|.| |||+|+..|+.+++++|+++++ +++
T Consensus 22 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-------~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~~~~~~~------- 86 (223)
T 2f8y_A 22 DRTGETALHLAARYSRSDAAKRLLEASAD-------ANIQDNMGRT-PLHAAVSADAQGVFQILIRNRATDLD------- 86 (223)
T ss_dssp TTTCCCHHHHHHHTTCHHHHHHHHHTTCC-------TTCCCTTSCC-HHHHHHHTTCHHHHHHHHHBTTSCTT-------
T ss_pred CCCCCchHHHHHHcCCHHHHHHHHHcCCC-------CCCcCCCCCC-HHHHHHHcCCHHHHHHHHHcCCCCcc-------
Confidence 34588999999999999999999999988 7788999999 9999999999999999999987 444
Q ss_pred CCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCC
Q 039985 177 DKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKG 256 (357)
Q Consensus 177 ~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G 256 (357)
.++..|.||||+|+..|+.+++++|+++|+++. .+|..|+||||+|+..|+.+++++|++ .+.+++.+|..|
T Consensus 87 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~---~~~~~g~t~L~~A~~~~~~~~v~~Ll~-----~g~~~~~~~~~g 158 (223)
T 2f8y_A 87 ARMHDGTTPLILAARLAVEGMLEDLINSHADVN---AVDDLGKSALHWAAAVNNVDAAVVLLK-----NGANKDMQNNRE 158 (223)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTT---CBCTTSCBHHHHHHHTTCHHHHHHHHH-----TTCCTTCCCTTC
T ss_pred cCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCc---CcCCCCCcHHHHHHHcCCHHHHHHHHH-----cCCCCCCcCCCC
Confidence 455569999999999999999999999999998 999999999999999999999999998 678999999999
Q ss_pred CcHHHHHHHcCCCCCCCCCCChhHHHHHhhhHHHHHHhcc-CcccccccccCCCCHHHHHhhhh
Q 039985 257 YTLLHHVADMKHYKEGTRPGPVLQFQEELQLFEHVKEIMP-RHYAMHRDEKNKMTASDLFNLTH 319 (357)
Q Consensus 257 ~TpLh~Aa~~g~~~~~~~~~t~L~la~~l~~~~~v~~ll~-~~~~~~~n~~g~~Tp~dl~~~~~ 319 (357)
.||||+|+..|+. +.++.++. ..+.+.+|..|. ||+++|.+..
T Consensus 159 ~t~L~~A~~~~~~-------------------~~v~~Ll~~ga~~~~~~~~g~-t~l~~A~~~~ 202 (223)
T 2f8y_A 159 ETPLFLAAREGSY-------------------ETAKVLLDHFANRDITDHMDR-LPRDIAQERM 202 (223)
T ss_dssp CCHHHHHHHHTCH-------------------HHHHHHHHTTCCTTCCCTTCC-CHHHHHHHTT
T ss_pred cCHHHHHHHcCCH-------------------HHHHHHHHcCCCCccccccCC-CHHHHHHHhc
Confidence 9999999999973 34555553 347788999999 9999997544
|
| >1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-32 Score=267.31 Aligned_cols=198 Identities=15% Similarity=0.135 Sum_probs=169.3
Q ss_pred CCCCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccC
Q 039985 98 SPANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKD 177 (357)
Q Consensus 98 ~~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~ 177 (357)
...|.||||+|+..|+.+++++|++.+.+ .+..+..|.| |||+|+..|+.+++++|+++|+++. .
T Consensus 143 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-------~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~g~~~~-------~ 207 (437)
T 1n11_A 143 TKKGFTPLHVAAKYGKVRVAELLLERDAH-------PNAAGKNGLT-PLHVAVHHNNLDIVKLLLPRGGSPH-------S 207 (437)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHTTCC-------TTCCCSSCCC-HHHHHHHTTCHHHHHHHGGGTCCSC-------C
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhCCCC-------CCCCCCCCCC-HHHHHHHcCCHHHHHHHHhCCCCCC-------C
Confidence 34578888888888888888888888887 6677888999 9999999999999999999988876 4
Q ss_pred CCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCC
Q 039985 178 KNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGY 257 (357)
Q Consensus 178 ~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~ 257 (357)
++..|.||||+|+..|+.+++++|++.|++++ ..|..|+||||+|+..|+.+++++|++ .+.+++.+|..|.
T Consensus 208 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~---~~~~~g~t~L~~A~~~g~~~~v~~Ll~-----~~~~~~~~~~~g~ 279 (437)
T 1n11_A 208 PAWNGYTPLHIAAKQNQVEVARSLLQYGGSAN---AESVQGVTPLHLAAQEGHAEMVALLLS-----KQANGNLGNKSGL 279 (437)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT---CCCTTCCCHHHHHHHTTCHHHHHHHHT-----TTCCTTCCCTTCC
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC---CCCCCCCCHHHHHHHCCCHHHHHHHHh-----cCCCCCCCCCCCC
Confidence 55568999999999999999999999999888 889999999999999999999999987 6778899999999
Q ss_pred cHHHHHHHcCCCCC--------------CCCCCChhHHHHHhhhHHHHHHhcc-CcccccccccCCCCHHHHHhhhh
Q 039985 258 TLLHHVADMKHYKE--------------GTRPGPVLQFQEELQLFEHVKEIMP-RHYAMHRDEKNKMTASDLFNLTH 319 (357)
Q Consensus 258 TpLh~Aa~~g~~~~--------------~~~~~t~L~la~~l~~~~~v~~ll~-~~~~~~~n~~g~~Tp~dl~~~~~ 319 (357)
||||+|+..|+.+. ...+.|||++|...+..+.|+.++. +.+.+.+|..|. ||+++|....
T Consensus 280 t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~-t~L~~A~~~g 355 (437)
T 1n11_A 280 TPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGY-SPLHQAAQQG 355 (437)
T ss_dssp CHHHHHHHHTCHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSC-CHHHHHHHTT
T ss_pred CHHHHHHHcCCHHHHHHHHhCCccCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCCCCCCCCCCC-CHHHHHHHCC
Confidence 99999999998541 2345599999999999998988884 457888999999 9999997543
|
| >2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-31 Score=238.66 Aligned_cols=186 Identities=12% Similarity=0.079 Sum_probs=156.4
Q ss_pred CCCCHHHHHHhcCCHHHHHHHHhc-CcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCC
Q 039985 100 ANISTISLGLGKGNMLKAKKLVDF-SAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDK 178 (357)
Q Consensus 100 ~g~t~Lh~A~~~g~~~~vk~Ll~~-~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~ 178 (357)
.|.||||+|+..|+.++++.|++. +.+ .+..|..|.| |||+|+..|+.++|++|+++|+++...... .+
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~-------~~~~~~~g~t-~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~--~~ 71 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGCE-------VHQRGAMGET-ALHIAALYDNLEAAMVLMEAAPELVFEPMT--SE 71 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCSC-------TTCCCTTSCC-HHHHHHHTTCHHHHHHHHHHCGGGGGCCCC--ST
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCC-------cccCCCCCCC-HHHHHHHcCCHHHHHHHHHcCchhcccccc--cc
Confidence 389999999999999999999998 776 6778999999 999999999999999999999986432221 55
Q ss_pred CcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCC-------------CCChHHHHHHHcCCHHHHHHHHhhhccCC
Q 039985 179 NWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNE-------------KEQNILHVAVKRRQYKVFELITKEMQLSV 245 (357)
Q Consensus 179 ~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~-------------~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~ 245 (357)
|..|.||||+|+..|+.+++++|+++|+++. .++. .|+||||+|+..|+.+++++|++ .
T Consensus 72 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-----~ 143 (232)
T 2rfa_A 72 LYEGQTALHIAVINQNVNLVRALLARGASVS---ARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIE-----H 143 (232)
T ss_dssp TTTTCCHHHHHHHTTCHHHHHHHHHTTCCTT---CCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHH-----T
T ss_pred CCCCcCHHHHHHHcCCHHHHHHHHhCCCCCC---cccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHH-----C
Confidence 6679999999999999999999999999988 5554 79999999999999999999998 6
Q ss_pred ccccccccCCCCcHHHHHHHcCCCCCCCCCCChhHHHHHhhhHHHHHHhccC-ccc------ccccccCCCCHHHHHhhh
Q 039985 246 PKWASRIDKKGYTLLHHVADMKHYKEGTRPGPVLQFQEELQLFEHVKEIMPR-HYA------MHRDEKNKMTASDLFNLT 318 (357)
Q Consensus 246 ~~~~~~~d~~G~TpLh~Aa~~g~~~~~~~~~t~L~la~~l~~~~~v~~ll~~-~~~------~~~n~~g~~Tp~dl~~~~ 318 (357)
+++++.+|.+|+||||+|+..|+.+ +.. ..++.++.. .+. +.+|..|. ||+++|...
T Consensus 144 ga~~~~~d~~g~t~L~~A~~~~~~~----------~~~-----~i~~~Ll~~g~~~~~~~~~~~~~~~g~-tpl~~A~~~ 207 (232)
T 2rfa_A 144 GADIRAQDSLGNTVLHILILQPNKT----------FAC-----QMYNLLLSYDGGDHLKSLELVPNNQGL-TPFKLAGVE 207 (232)
T ss_dssp TCCTTCCCTTSCCHHHHHHTCSCHH----------HHH-----HHHHHHHHTTCSCSSCCGGGCCCTTSC-CHHHHHHHH
T ss_pred CCCCCCCCCCCCCHHHHHHHcCChH----------HHH-----HHHHHHHhcCCchhhhhhhccCCCCCC-CHHHHHHHc
Confidence 8899999999999999999999732 111 112444422 233 57899999 999999754
Q ss_pred h
Q 039985 319 H 319 (357)
Q Consensus 319 ~ 319 (357)
.
T Consensus 208 g 208 (232)
T 2rfa_A 208 G 208 (232)
T ss_dssp T
T ss_pred C
Confidence 3
|
| >1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A | Back alignment and structure |
|---|
Probab=99.98 E-value=8.3e-32 Score=243.71 Aligned_cols=172 Identities=15% Similarity=0.155 Sum_probs=95.9
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCC-CCCCCCCCccCCC
Q 039985 101 NISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDC-TIKGVPNHKKDKN 179 (357)
Q Consensus 101 g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~-~~~~~~~~~~~~~ 179 (357)
|.||||+|+..|+.+++++|++.+++ .+..|..|.| |||+|+..|+.+++++|+++++ +++ .++
T Consensus 57 g~t~L~~A~~~g~~~~v~~Ll~~g~~-------~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~~~~~~~-------~~~ 121 (253)
T 1yyh_A 57 GETALHLAARYSRSDAAKRLLEASAD-------ANIQDNMGRT-PLHAAVSADAQGVFQILIRNRATDLD-------ARM 121 (253)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCC-------TTCCCTTSCC-HHHHHHHHTCHHHHHHHHHSTTSCTT-------CCC
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCC-------CCCCCCCCCC-HHHHHHHcCCHHHHHHHHHcCCCCcc-------ccC
Confidence 44556666666666666666655555 4445555555 6666666666666666665554 332 333
Q ss_pred cCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcH
Q 039985 180 WAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTL 259 (357)
Q Consensus 180 ~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~Tp 259 (357)
..|.||||+|+..|+.+++++|+++|++++ .+|..|+||||+|+..|+.+++++|++ .+++++.+|..|+||
T Consensus 122 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---~~d~~g~t~L~~A~~~~~~~~v~~Ll~-----~ga~~~~~~~~g~tp 193 (253)
T 1yyh_A 122 HDGTTPLILAARLAVEGMLEDLINSHADVN---AVDDLGKSALHWAAAVNNVDAAVVLLK-----NGANKDMQNNREETP 193 (253)
T ss_dssp TTCCCHHHHHHHHTCSSHHHHHHHTTCCTT---CBCTTSCBHHHHHHHHTCHHHHHHHHH-----TTCCTTCCCTTSCCH
T ss_pred CCCCcHHHHHHHcChHHHHHHHHHcCCCCC---CcCCCCCCHHHHHHHcCCHHHHHHHHH-----cCCCCCCcCCCCCCH
Confidence 345566666666666666666666555555 555556666666666666666666655 445555555566666
Q ss_pred HHHHHHcCCCCC--------------CCCCCChhHHHHHhhhHHHHHHhc
Q 039985 260 LHHVADMKHYKE--------------GTRPGPVLQFQEELQLFEHVKEIM 295 (357)
Q Consensus 260 Lh~Aa~~g~~~~--------------~~~~~t~L~la~~l~~~~~v~~ll 295 (357)
||+|+..|+.+. +..+.||+++|...+..+.++.+.
T Consensus 194 L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~g~~~i~~~l~ 243 (253)
T 1yyh_A 194 LFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLD 243 (253)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHHcCCCccccccCCCCHHHHHHHcCCHHHHHHHH
Confidence 666665555331 122335666655555555555444
|
| >1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 | Back alignment and structure |
|---|
Probab=99.98 E-value=2.3e-32 Score=252.30 Aligned_cols=207 Identities=15% Similarity=0.070 Sum_probs=175.9
Q ss_pred CCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCC
Q 039985 100 ANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKN 179 (357)
Q Consensus 100 ~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~ 179 (357)
.|.||||.||..|+.++++.|++.+++ .+..|..|.| |||+|+..|+.++|++|+++|++++ .+|
T Consensus 39 ~~~t~l~~A~~~g~~~~v~~Ll~~g~~-------~~~~~~~g~t-~L~~A~~~g~~~~v~~Ll~~ga~~~-------~~~ 103 (299)
T 1s70_B 39 DDGAVFLAACSSGDTEEVLRLLERGAD-------INYANVDGLT-ALHQACIDDNVDMVKFLVENGANIN-------QPD 103 (299)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHHCCC-------TTCBCTTCCB-HHHHHHHTTCHHHHHHHHHTTCCTT-------CCC
T ss_pred CCccHHHHHHHcCCHHHHHHHHHcCCC-------CcccCCCCCC-HHHHHHHcCCHHHHHHHHHCCCCCC-------CCC
Confidence 478999999999999999999999998 7788999999 9999999999999999999999987 566
Q ss_pred cCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccC---------------
Q 039985 180 WAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLS--------------- 244 (357)
Q Consensus 180 ~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~--------------- 244 (357)
..|.||||+|+..|+.++|++|+++|+++. .+|..|.||||+|+..++.++++.|+...+.+
T Consensus 104 ~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~---~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~ 180 (299)
T 1s70_B 104 NEGWIPLHAAASCGYLDIAEYLISQGAHVG---AVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRD 180 (299)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHHHHTTCCTT---CCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHH
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHhCCCCCC---CcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHH
Confidence 679999999999999999999999999998 89999999999999999999999887653221
Q ss_pred -------CccccccccCCCCcHHHHHHHcCCCCC--------------CCCCCChhHHHHHhhhHHHHHHhcc-Cccccc
Q 039985 245 -------VPKWASRIDKKGYTLLHHVADMKHYKE--------------GTRPGPVLQFQEELQLFEHVKEIMP-RHYAMH 302 (357)
Q Consensus 245 -------~~~~~~~~d~~G~TpLh~Aa~~g~~~~--------------~~~~~t~L~la~~l~~~~~v~~ll~-~~~~~~ 302 (357)
........+..|.||||+|+..|+.+. ...+.|||++|...+..+.++.++. ..+.+.
T Consensus 181 ~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~ 260 (299)
T 1s70_B 181 ARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEA 260 (299)
T ss_dssp HHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred HHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCC
Confidence 011223466789999999999998551 2345599999999999988888885 458889
Q ss_pred ccccCCCCHHHHHhhhhHHHHHH
Q 039985 303 RDEKNKMTASDLFNLTHEDQLRK 325 (357)
Q Consensus 303 ~n~~g~~Tp~dl~~~~~~~~~~~ 325 (357)
+|..|+ ||+++|.+...+.+++
T Consensus 261 ~d~~g~-t~l~~A~~~~~~~l~~ 282 (299)
T 1s70_B 261 VNKVGQ-TAFDVADEDILGYLEE 282 (299)
T ss_dssp CCTTSC-CTTTSCCSGGGHHHHH
T ss_pred cCCCCC-CHHHHHHHHHHHHHHH
Confidence 999999 9999998765554443
|
| >3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} | Back alignment and structure |
|---|
Probab=99.97 E-value=1e-31 Score=255.63 Aligned_cols=197 Identities=11% Similarity=0.117 Sum_probs=175.2
Q ss_pred CCCCCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCcc
Q 039985 97 TSPANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKK 176 (357)
Q Consensus 97 ~~~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~ 176 (357)
.+..|.||||+||..|+.+++++|++.+.+ .+..|..|.| |||+|+..|+.++|++|+++|++++
T Consensus 16 ~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~-------~~~~d~~g~t-~L~~A~~~g~~~~v~~Ll~~g~~~~------- 80 (364)
T 3ljn_A 16 SDDENMEKIHVAARKGQTDEVRRLIETGVS-------PTIQNRFGCT-ALHLACKFGCVDTAKYLASVGEVHS------- 80 (364)
T ss_dssp CCHHHHHHHHHHHHHTCHHHHHHHHHTTCC-------TTCCCTTCCC-HHHHHHHHCCHHHHHHHHHHCCCCC-------
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-------ccccCCCCCc-HHHHHHHcCCHHHHHHHHHCCCCcc-------
Confidence 345689999999999999999999999988 7789999999 9999999999999999999999654
Q ss_pred CCCcCcchHHHHHHHCCCHHHHHHHHhh----CCCcccccc-----------------cCCCCChHHHHHHHcC--CHHH
Q 039985 177 DKNWAIRLTLLFAASNGITEILKEIIHQ----HPQAILLDN-----------------LNEKEQNILHVAVKRR--QYKV 233 (357)
Q Consensus 177 ~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~----~~~~~~~~~-----------------~d~~G~TpLh~A~~~g--~~~i 233 (357)
. ..|.||||+|+..|+.++|++|+++ +.++. . +|..|+||||+|+..| +.++
T Consensus 81 ~--~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~ 155 (364)
T 3ljn_A 81 L--WHGQKPIHLAVMANKTDLVVALVEGAKERGQMPE---SLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEM 155 (364)
T ss_dssp C--BTTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHH---HHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHH
T ss_pred c--cCCCCHHHHHHHcCCHHHHHHHHHhccccCCCHH---HHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHH
Confidence 1 2389999999999999999999999 77776 4 8889999999999999 9999
Q ss_pred HHHHHhhhccCCccccccccCCCCcHHHHHHHcCCCCC-------------------CCCCCChhHHHHHhhhHHHHHHh
Q 039985 234 FELITKEMQLSVPKWASRIDKKGYTLLHHVADMKHYKE-------------------GTRPGPVLQFQEELQLFEHVKEI 294 (357)
Q Consensus 234 v~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~-------------------~~~~~t~L~la~~l~~~~~v~~l 294 (357)
|++|++ .+++++.+|..|.||||+|+..|+.+. ...+.|||++|...+..+.|+.|
T Consensus 156 v~~Ll~-----~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~L 230 (364)
T 3ljn_A 156 IKILVQ-----LGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRF 230 (364)
T ss_dssp HHHHHH-----HTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHH
T ss_pred HHHHHH-----cCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHH
Confidence 999998 578999999999999999999998541 12455999999999999999998
Q ss_pred ccC-cccccccccCCCCHHHHHhhhh
Q 039985 295 MPR-HYAMHRDEKNKMTASDLFNLTH 319 (357)
Q Consensus 295 l~~-~~~~~~n~~g~~Tp~dl~~~~~ 319 (357)
+.. .+.+.+|.+|. ||+++|....
T Consensus 231 l~~gad~~~~d~~g~-tpL~~A~~~g 255 (364)
T 3ljn_A 231 VEMGIDVNMEDNEHT-VPLYLSVRAA 255 (364)
T ss_dssp HTTTCCTTCCCTTSC-CHHHHHHHTC
T ss_pred HHcCCCCCCCCCCCC-CHHHHHHHhC
Confidence 854 58889999999 9999997543
|
| >3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A | Back alignment and structure |
|---|
Probab=99.97 E-value=8.9e-31 Score=232.70 Aligned_cols=168 Identities=15% Similarity=0.122 Sum_probs=141.0
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCc
Q 039985 101 NISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNW 180 (357)
Q Consensus 101 g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~ 180 (357)
|.||||+|+..|+.+++++|++.+.+ .+..|..|.| |||+|+..|+.+++++|+++|++++ .++.
T Consensus 40 g~t~L~~A~~~g~~~~v~~Ll~~g~~-------~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~g~~~~-------~~~~ 104 (231)
T 3aji_A 40 SRTALHWACSAGHTEIVEFLLQLGVP-------VNDKDDAGWS-PLHIAASAGXDEIVKALLVKGAHVN-------AVNQ 104 (231)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTTCC-------SCCCCTTSCC-HHHHHHHHTCHHHHHHHHHTTCCTT-------CCCT
T ss_pred CCCHHHHHHHcCcHHHHHHHHHhCCC-------CCCcCCCCCC-HHHHHHHcCHHHHHHHHHHcCCCCC-------CCCC
Confidence 77899999999999999999998887 6778888999 9999999999999999999988876 5555
Q ss_pred CcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcHH
Q 039985 181 AIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTLL 260 (357)
Q Consensus 181 ~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpL 260 (357)
.|.||||+|+..|+.+++++|+++|+++. .+|..|+||||+|+..|+.+++++|++ .+.+++.+|..|+|||
T Consensus 105 ~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~---~~~~~g~t~L~~A~~~~~~~~v~~Ll~-----~g~~~~~~~~~g~t~L 176 (231)
T 3aji_A 105 NGCTPLHYAASKNRHEIAVMLLEGGANPD---AKDHYDATAMHRAAAKGNLKMVHILLF-----YKASTNIQDTEGNTPL 176 (231)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTCCTT---CCCTTSCCHHHHHHHHTCHHHHHHHHH-----TTCCSCCCCTTSCCHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCC---CcCCCCCcHHHHHHHcCCHHHHHHHHh-----cCCCccccCCCCCCHH
Confidence 68999999999999999999999998887 888899999999999999999999987 6778888999999999
Q ss_pred HHHHHcCCCCC--------------CCCCCChhHHHHHhhhHHHH
Q 039985 261 HHVADMKHYKE--------------GTRPGPVLQFQEELQLFEHV 291 (357)
Q Consensus 261 h~Aa~~g~~~~--------------~~~~~t~L~la~~l~~~~~v 291 (357)
|+|+..|+.+. +..+.|||++|...+....+
T Consensus 177 ~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~ 221 (231)
T 3aji_A 177 HLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVAKGGLGLILK 221 (231)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHSCHHHHHHHH
T ss_pred HHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhhHHHHHH
Confidence 99999887541 23445899988765444433
|
| >1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D | Back alignment and structure |
|---|
Probab=99.97 E-value=4.2e-31 Score=241.22 Aligned_cols=168 Identities=14% Similarity=0.034 Sum_probs=137.9
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCC--------
Q 039985 101 NISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVP-------- 172 (357)
Q Consensus 101 g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~-------- 172 (357)
|.||||+|+..|+.+++++|++.+++ .+..+..|.| |||+|+..|+.+++++|++++++.....
T Consensus 45 g~t~L~~A~~~g~~~~v~~Ll~~ga~-------~~~~~~~g~t-pL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~ 116 (282)
T 1oy3_D 45 GQTALHLAAILGEASTVEKLYAAGAG-------VLVAERGGHT-ALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQS 116 (282)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTTCC-------SSCCCTTSCC-HHHHHTTTTCHHHHHHHSSSCCSSCCCC--------
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCC-------CCCCCCCCCC-HHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcc
Confidence 88999999999999999999999998 7788999999 9999999999999999999887632110
Q ss_pred --------------------------------CCccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCC-CCC
Q 039985 173 --------------------------------NHKKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNE-KEQ 219 (357)
Q Consensus 173 --------------------------------~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~-~G~ 219 (357)
...+.++..|.||||+|+..|+.++|++|+++|++++ .++. .|+
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~---~~~~~~g~ 193 (282)
T 1oy3_D 117 QDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLN---KPEPTCGR 193 (282)
T ss_dssp ---------------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTT---CCCTTTCC
T ss_pred cccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCC---CCCCCCCc
Confidence 0112456679999999999999999999999999998 6664 599
Q ss_pred hHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcHHHHHHHcCCCCC--------------CCCCCChhHHHHH
Q 039985 220 NILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTLLHHVADMKHYKE--------------GTRPGPVLQFQEE 284 (357)
Q Consensus 220 TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~--------------~~~~~t~L~la~~ 284 (357)
||||+|+..|+.++|++|++ .+++++.+|..|+||||+|+..|+.+. ...+.|||+.+..
T Consensus 194 tpL~~A~~~~~~~~v~~Ll~-----~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~a~~ 267 (282)
T 1oy3_D 194 TPLHLAVEAQAASVLELLLK-----AGADPTARMYGGRTPLGSALLRPNPILARLLRAHGAPEPEDGGDKLSPCSSSGS 267 (282)
T ss_dssp CHHHHHHHTTCHHHHHHHHH-----TTCCTTCCCTTSCCHHHHHHTSSCHHHHHHHHHTTCCCCCCC------------
T ss_pred CHHHHHHHcCCHHHHHHHHH-----cCCCCcccccCCCCHHHHHHHcCCcHHHHHHHHcCCCcCcCCCcccccccccCC
Confidence 99999999999999999998 688999999999999999999998551 2334488877654
|
| >4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=6.5e-32 Score=247.53 Aligned_cols=162 Identities=15% Similarity=0.127 Sum_probs=128.6
Q ss_pred CCCHHHHHHhcCCH-HHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCC
Q 039985 101 NISTISLGLGKGNM-LKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKN 179 (357)
Q Consensus 101 g~t~Lh~A~~~g~~-~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~ 179 (357)
|.||||.|+..++. .++++|++.|++ ++..|.+|.| |||+|+..|+.++|++|++.|++++ .++
T Consensus 52 ~~t~L~~a~~~~~~~~~v~~Ll~~Gad-------vn~~d~~G~T-pLh~A~~~g~~~~v~~Ll~~~a~~~-------~~~ 116 (269)
T 4b93_B 52 FCHPLCQCPKCAPAQKRLAKVPASGLG-------VNVTSQDGSS-PLHVAALHGRADLIPLLLKHGANAG-------ARN 116 (269)
T ss_dssp -----------------------CCCC-------TTCCCTTSCC-HHHHHHHTTCTTHHHHHHHTTCCTT-------CCC
T ss_pred CCCHHHHHHHhCCHHHHHHHHHHCCCC-------CCCcCCCCCC-HHHHHHHcCcHHHHHHHHhcCCCcC-------ccC
Confidence 56899999988876 478999999998 7889999999 9999999999999999999999987 556
Q ss_pred cCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcH
Q 039985 180 WAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTL 259 (357)
Q Consensus 180 ~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~Tp 259 (357)
..|.||||+|+..|+.+++++|+++|++++ .+|..|+||||+||..|+.++|++|++ .++++|.+|..|+||
T Consensus 117 ~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n---~~d~~g~TpL~~A~~~g~~~~v~~Ll~-----~gadvn~~~~~g~t~ 188 (269)
T 4b93_B 117 ADQAVPLHLACQQGHFQVVKCLLDSNAKPN---KKDLSGNTPLIYACSGGHHELVALLLQ-----HGASINASNNKGNTA 188 (269)
T ss_dssp TTCCCHHHHHHHHTCHHHHHHHHHTTCCSC---CCCTTCCCHHHHHHHTTCGGGHHHHHH-----TTCCTTCBCTTSCBH
T ss_pred CCCCCccccccccChHHHHHHHHHCCCCCC---CCCCCCCCHHHHHHHCCCHHHHHHHHH-----CCCCCCccccCCCcH
Confidence 669999999999999999999999999998 999999999999999999999999998 688999999999999
Q ss_pred HHHHHHcCCCCC--------------CCCCCChhHHHHHh
Q 039985 260 LHHVADMKHYKE--------------GTRPGPVLQFQEEL 285 (357)
Q Consensus 260 Lh~Aa~~g~~~~--------------~~~~~t~L~la~~l 285 (357)
||+|+..|+.+. +..+.|||++|..-
T Consensus 189 Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~ 228 (269)
T 4b93_B 189 LHEAVIEKHVFVVELLLLHGASVQVLNKRQRTAVDCAEQN 228 (269)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCSGGGSCTT
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHhC
Confidence 999999998651 34556999998653
|
| >3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.1e-30 Score=230.58 Aligned_cols=200 Identities=12% Similarity=0.091 Sum_probs=176.9
Q ss_pred CCCCCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCcc
Q 039985 97 TSPANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKK 176 (357)
Q Consensus 97 ~~~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~ 176 (357)
.+.+|.|+||.|+..|+.+++++|++.+.+ .+..+..|.| |||+|+..|+.+++++|+++|+++....
T Consensus 5 ~d~~~~~~l~~A~~~g~~~~~~~Ll~~g~~-------~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~~~~~~~~~---- 72 (240)
T 3eu9_A 5 IDDYSTWDIVKATQYGIYERCRELVEAGYD-------VRQPDKENVT-LLHWAAINNRIDLVKYYISKGAIVDQLG---- 72 (240)
T ss_dssp CSCGGGCCHHHHHHTTCHHHHHHHHHTTCC-------TTCCCTTSCC-HHHHHHHTTCHHHHHHHHHTTCCTTCCB----
T ss_pred cccccchHHHHHHHcCChHHHHHHHHcCCC-------cCCCCCCCCC-HHHHHHHhCCHHHHHHHHHcCCcchhhc----
Confidence 345688999999999999999999999988 7778999999 9999999999999999999999876332
Q ss_pred CCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCC
Q 039985 177 DKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKG 256 (357)
Q Consensus 177 ~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G 256 (357)
+..|.||||+|+..|+.+++++|+++|+++. .+|..|+||||+|+..|+.+++++|++ .+.+++.+|..|
T Consensus 73 --~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~---~~~~~g~t~l~~A~~~~~~~~~~~Ll~-----~~~~~~~~~~~g 142 (240)
T 3eu9_A 73 --GDLNSTPLHWATRQGHLSMVVQLMKYGADPS---LIDGEGCSCIHLAAQFGHTSIVAYLIA-----KGQDVDMMDQNG 142 (240)
T ss_dssp --TTTTBCHHHHHHHHTCHHHHHHHHHTTCCTT---CCCTTSCCHHHHHHHTTCHHHHHHHHH-----TTCCTTCCCTTS
T ss_pred --CCcCCChhHHHHHcCCHHHHHHHHHcCCCCc---ccCCCCCCHHHHHHHcCHHHHHHHHHh-----cCCCccccCCCC
Confidence 2338999999999999999999999999998 899999999999999999999999998 678999999999
Q ss_pred CcHHHHHHHcCCCC-C--------------CC-CCCChhHHHHHhhhHHHHHHhcc-CcccccccccCCCCHHHHHhhhh
Q 039985 257 YTLLHHVADMKHYK-E--------------GT-RPGPVLQFQEELQLFEHVKEIMP-RHYAMHRDEKNKMTASDLFNLTH 319 (357)
Q Consensus 257 ~TpLh~Aa~~g~~~-~--------------~~-~~~t~L~la~~l~~~~~v~~ll~-~~~~~~~n~~g~~Tp~dl~~~~~ 319 (357)
.||||+|+..++.. . .. .+.|||++|...+..+.++.++. +.+.+.+|..|. ||+++|.+..
T Consensus 143 ~t~l~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~-t~l~~A~~~~ 221 (240)
T 3eu9_A 143 MTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGE-SALDLAKQRK 221 (240)
T ss_dssp CCHHHHHHHHCCSSTTHHHHHHTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBCTTSC-BHHHHHHHTT
T ss_pred CcHHHHHHHhCChHHHHHHHHhcCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCC-CHHHHHHHcC
Confidence 99999999887632 1 12 34599999999999999988884 457889999999 9999997643
|
| >3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.5e-30 Score=224.89 Aligned_cols=185 Identities=17% Similarity=0.185 Sum_probs=158.9
Q ss_pred CCCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCC
Q 039985 99 PANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDK 178 (357)
Q Consensus 99 ~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~ 178 (357)
.++.||||.|+..|+.+.++.|++.+..+ .+..|..|.| |||+|+..|+.++|++|+++|++++ .+
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~ll~~~~~~------~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~g~~~~-------~~ 68 (201)
T 3hra_A 3 TYEVGALLEAANQRDTKKVKEILQDTTYQ------VDEVDTEGNT-PLNIAVHNNDIEIAKALIDRGADIN-------LQ 68 (201)
T ss_dssp CCCTTHHHHHHHTTCHHHHHHHHTCTTCC------TTCCCTTSCC-HHHHHHHHTCHHHHHHHHHTTCCTT-------CC
T ss_pred cccccHHHHHHHhccHHHHHHHHHcCCCC------CCCCCCCCCC-HHHHHHHcCCHHHHHHHHHcCCCCC-------CC
Confidence 35889999999999999999999988732 5668899999 9999999999999999999999987 56
Q ss_pred CcCcchHHHHHHHCCCHHHHHHHHhhCC-CcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCC
Q 039985 179 NWAIRLTLLFAASNGITEILKEIIHQHP-QAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGY 257 (357)
Q Consensus 179 ~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~-~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~ 257 (357)
+..|.||||+|+..|+.+++++|++++. ++. ..|..|+||||+|+..|+.+++++|++. ...+++.+|..|+
T Consensus 69 ~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~---~~~~~g~t~L~~A~~~~~~~~v~~Ll~~----g~~~~~~~~~~g~ 141 (201)
T 3hra_A 69 NSISDSPYLYAGAQGRTEILAYMLKHATPDLN---KHNRYGGNALIPAAEKGHIDNVKLLLED----GREDIDFQNDFGY 141 (201)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTT---CCCTTSCCSHHHHHHTTCHHHHHHHHHH----CCCCTTCCCTTSC
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhccCcccc---cccCCCCcHHHHHHHcCCHHHHHHHHHc----CCCCcCCCCCCCC
Confidence 6669999999999999999999995554 555 8999999999999999999999999984 3378999999999
Q ss_pred cHHHHHHHcCCCCCCCCCCChhHHHHHhhhHHHHHHhcc-CcccccccccCCCCHHHHHhhhh
Q 039985 258 TLLHHVADMKHYKEGTRPGPVLQFQEELQLFEHVKEIMP-RHYAMHRDEKNKMTASDLFNLTH 319 (357)
Q Consensus 258 TpLh~Aa~~g~~~~~~~~~t~L~la~~l~~~~~v~~ll~-~~~~~~~n~~g~~Tp~dl~~~~~ 319 (357)
||||+|+..++.. .++.+.++.++. +.+.+.+|.+|. ||+++|....
T Consensus 142 t~L~~A~~~~~~~--------------~~~~~~v~~Ll~~ga~~~~~~~~g~-t~l~~A~~~~ 189 (201)
T 3hra_A 142 TALIEAVGLREGN--------------QLYQDIVKLLMENGADQSIKDNSGR-TAMDYANQKG 189 (201)
T ss_dssp CHHHHHHHSSCCS--------------HHHHHHHHHHHHTTCCTTCCCTTSC-CHHHHHHHHT
T ss_pred CHHHHHHHhccch--------------hhHHHHHHHHHHCCCCCCccCCCCC-CHHHHHHHcC
Confidence 9999999998632 112445666663 457888999999 9999997543
|
| >1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E | Back alignment and structure |
|---|
Probab=99.97 E-value=2.4e-31 Score=237.77 Aligned_cols=185 Identities=13% Similarity=0.099 Sum_probs=157.0
Q ss_pred CCCCCCCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCC
Q 039985 95 STTSPANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNH 174 (357)
Q Consensus 95 ~~~~~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~ 174 (357)
+..+..|.||||+|+..|+.+++++|++.+++ .+..|..|.| |||+|+..|+.+++++|++++++... ...
T Consensus 39 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-------~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~~~~~~~-~~~ 109 (236)
T 1ikn_D 39 NFQNNLQQTPLHLAVITNQPEIAEALLGAGCD-------PELRDFRGNT-PLHLACEQGCLASVGVLTQSCTTPHL-HSI 109 (236)
T ss_dssp CCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCC-------SCCCCTTCCC-HHHHHHHHTCHHHHHHHHHSTTTTSS-SCG
T ss_pred hccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-------CCCcCCCCCC-HHHHHHHcCCHHHHHHHHhcccchhH-HHH
Confidence 33455699999999999999999999999988 7778999999 99999999999999999999876431 111
Q ss_pred ccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCC-CCChHHHHHHHcCCHHHHHHHHhhhccCCcccccccc
Q 039985 175 KKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNE-KEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRID 253 (357)
Q Consensus 175 ~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~-~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d 253 (357)
.+..+..|.||||+|+..|+.+++++|+++|++++ .+|. .|+||||+|+..|+.+++++|++ .+++++.+|
T Consensus 110 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---~~~~~~g~tpL~~A~~~~~~~~v~~Ll~-----~ga~~~~~~ 181 (236)
T 1ikn_D 110 LKATNYNGHTCLHLASIHGYLGIVELLVSLGADVN---AQEPCNGRTALHLAVDLQNPDLVSLLLK-----CGADVNRVT 181 (236)
T ss_dssp GGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTT---CCCTTTCCCHHHHHHHTTCHHHHHHHHT-----TTCCSCCCC
T ss_pred hhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC---CCCCCCCCCHHHHHHHcCCHHHHHHHHH-----cCCCCCccc
Confidence 22566679999999999999999999999999998 8887 99999999999999999999988 688999999
Q ss_pred CCCCcHHHHHHHcCCCCCCCCCCChhHHHHHhhhHHHHHHhccCc---ccccccccCCCCHHHHHh
Q 039985 254 KKGYTLLHHVADMKHYKEGTRPGPVLQFQEELQLFEHVKEIMPRH---YAMHRDEKNKMTASDLFN 316 (357)
Q Consensus 254 ~~G~TpLh~Aa~~g~~~~~~~~~t~L~la~~l~~~~~v~~ll~~~---~~~~~n~~g~~Tp~dl~~ 316 (357)
..|.||||+|+..|+. +.++.++... .....+.+|+ ||.+...
T Consensus 182 ~~g~tpl~~A~~~~~~-------------------~~~~~Ll~~ga~~~~~~~~~~~~-~~~~~~~ 227 (236)
T 1ikn_D 182 YQGYSPYQLTWGRPST-------------------RIQQQLGQLTLENLQMLPESEDE-ESYDTES 227 (236)
T ss_dssp TTCCCGGGGCTTSSCH-------------------HHHHHHHTTSCGGGSSCCCCCTT-TCCCCC-
T ss_pred CCCCCHHHHHHccCch-------------------HHHHHHHHcchhhhhcCCccchH-HHHhhhc
Confidence 9999999999999973 3455555332 2347888999 9987664
|
| >1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-30 Score=233.28 Aligned_cols=172 Identities=10% Similarity=0.101 Sum_probs=138.8
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCC----CCCCCCCCcc
Q 039985 101 NISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDC----TIKGVPNHKK 176 (357)
Q Consensus 101 g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~----~~~~~~~~~~ 176 (357)
|.||||+|+..|+.+++++|++.+++ .+..+..|.| |||+|+..|+.+++++|++.++ +++
T Consensus 46 g~t~L~~A~~~~~~~~v~~Ll~~g~~-------~~~~~~~g~t-~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~------- 110 (241)
T 1k1a_A 46 RQTPLHLAVITTLPSVVRLLVTAGAS-------PMALDRHGQT-AAHLACEHRSPTCLRALLDSAAPGTLDLE------- 110 (241)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCC-------TTCCCTTSCC-HHHHHHHTTCHHHHHHHHHHSCTTSCCTT-------
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCC-------ccccCCCCCC-HHHHHHHcCCHHHHHHHHHcCCCcccccc-------
Confidence 77889999999999999998888887 6677888888 9999998888999999888887 333
Q ss_pred CCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccC-CCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCC
Q 039985 177 DKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLN-EKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKK 255 (357)
Q Consensus 177 ~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d-~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~ 255 (357)
.++..|.||||+|+..|+.+++++|+++|+++. ..| ..|+||||+|+..|+.+++++|++ .+.+++.+|..
T Consensus 111 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~---~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-----~g~~~~~~~~~ 182 (241)
T 1k1a_A 111 ARNYDGLTALHVAVNTECQETVQLLLERGADID---AVDIKSGRSPLIHAVENNSLSMVQLLLQ-----HGANVNAQMYS 182 (241)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT---CCCTTTCCCHHHHHHHTTCHHHHHHHHH-----TTCCTTCBCTT
T ss_pred ccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcc---cccccCCCcHHHHHHHcCCHHHHHHHHH-----cCCCCCCcCCC
Confidence 455568899999998899999999988888887 666 788899999999889999988887 67788888888
Q ss_pred CCcHHHHHHHcCCCCC--------------CCCCCChhHHHHHhhhHHHHHHhc
Q 039985 256 GYTLLHHVADMKHYKE--------------GTRPGPVLQFQEELQLFEHVKEIM 295 (357)
Q Consensus 256 G~TpLh~Aa~~g~~~~--------------~~~~~t~L~la~~l~~~~~v~~ll 295 (357)
|+||||+|+..|+.+. +..+.|||++|...+..+.++.+.
T Consensus 183 g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~i~~~l~ 236 (241)
T 1k1a_A 183 GSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILRGKA 236 (241)
T ss_dssp SCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCTTTTCSSHHHHHHHTC--
T ss_pred CCCHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCCCHHHHHHhcCcHHHHhhhc
Confidence 8999999988887541 234458888887777777666554
|
| >2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A | Back alignment and structure |
|---|
Probab=99.97 E-value=2.3e-30 Score=229.33 Aligned_cols=149 Identities=15% Similarity=0.075 Sum_probs=95.9
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhh-cCCCCCcHHHHHHHhcCcHHHHHHHHHcC--CCCCCCCCCccC
Q 039985 101 NISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKD-CTNKGNMIKAKKFVDFSAAELVELFVKKD--CTIKGVPNHKKD 177 (357)
Q Consensus 101 g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~-~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g--~~~~~~~~~~~~ 177 (357)
|.||||+|+..|+.+++++|++.++. ..... .+..|.| |||+|+..|+.+++++|+++| ++++ .
T Consensus 36 g~t~L~~A~~~~~~~~v~~Ll~~~~~-----~~~~~~~~~~g~t-~L~~A~~~~~~~~~~~Ll~~g~~~~~~-------~ 102 (228)
T 2dzn_A 36 GRIPLHWSVSFQAHEITSFLLSKMEN-----VNLDDYPDDSGWT-PFHIACSVGNLEVVKSLYDRPLKPDLN-------K 102 (228)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTCTT-----CCGGGCCCTTSCC-HHHHHHHHCCHHHHHHHHSSSSCCCTT-------C
T ss_pred CCCHHHHHHHcCCHHHHHHHHhcccc-----ccccccCCCCCCC-HHHHHHHcCCHHHHHHHHhCCCCcccc-------c
Confidence 55667777777777777777766632 00233 5566666 777777777777777777666 4443 3
Q ss_pred CCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCc-cccccccCCC
Q 039985 178 KNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVP-KWASRIDKKG 256 (357)
Q Consensus 178 ~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~-~~~~~~d~~G 256 (357)
++..|.||||+|+..|+.+++++|+++|+++. .+|..|+||||+|+..|+.+++++|++ .+ .+++.+|..|
T Consensus 103 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~---~~~~~g~t~L~~A~~~~~~~~v~~Ll~-----~g~~~~~~~d~~g 174 (228)
T 2dzn_A 103 ITNQGVTCLHLAVGKKWFEVSQFLIENGASVR---IKDKFNQIPLHRAASVGSLKLIELLCG-----LGKSAVNWQDKQG 174 (228)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSC---CCCTTSCCHHHHHHHTTCHHHHHHHHT-----TTCCCSCCCCTTS
T ss_pred CCcCCCCHHHHHHHcCCHhHHHHHHHcCCCcc---ccCCCCCCHHHHHHHcCCHHHHHHHHh-----cCcccccCcCCCC
Confidence 34446677777777777777777777666666 666667777777777777777777765 33 5666666677
Q ss_pred CcHHHHHHHcCCCC
Q 039985 257 YTLLHHVADMKHYK 270 (357)
Q Consensus 257 ~TpLh~Aa~~g~~~ 270 (357)
+||||+|+..|+.+
T Consensus 175 ~t~L~~A~~~~~~~ 188 (228)
T 2dzn_A 175 WTPLFHALAEGHGD 188 (228)
T ss_dssp CCHHHHHHHTTCHH
T ss_pred CCHHHHHHHcCCHH
Confidence 77777777666533
|
| >3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.2e-30 Score=231.06 Aligned_cols=211 Identities=14% Similarity=0.145 Sum_probs=135.3
Q ss_pred ccchHHHHHHHhhhccccHHHHHHHHHhhhhc--ccCCCCCCCcCcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 039985 11 EGRPAIKKIWMKKQMHKNANKLLKKLVKEETL--CLGDGEQNPEISLLSPESSSTSLPNPEISSSNPESSTSSLPNPEIF 88 (357)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~~~~--~~d~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (357)
.|++++-.-.. .+..++|+.|+++|.+ ..+.+|+||++.+...... +......+
T Consensus 10 ~g~t~L~~A~~-----~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~-------~~v~~Ll~------------ 65 (237)
T 3b7b_A 10 NKRSPLHAAAE-----AGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHL-------EAVKYLIK------------ 65 (237)
T ss_dssp CSCCHHHHHHH-----HTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCH-------HHHHHHHT------------
T ss_pred CCCCHHHHHHH-----cCcHHHHHHHHHcCCCcCccCCCCCCHHHHHHHhCCH-------HHHHHHHh------------
Confidence 46666654333 2346899999999887 6666777776644322210 00000000
Q ss_pred CCCCCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCC
Q 039985 89 SPDPESSTTSPANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTI 168 (357)
Q Consensus 89 ~~~~~~~~~~~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~ 168 (357)
.....+..+..|.||||+|+..|+.+++++|++.++.+ .+..+..|.| |||+|+..|+.+++++|+++|+++
T Consensus 66 -~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~------~~~~~~~g~t-~L~~A~~~~~~~~~~~Ll~~g~~~ 137 (237)
T 3b7b_A 66 -AGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMD------VNCQDDGGWT-PMIWATEYKHVDLVKLLLSKGSDI 137 (237)
T ss_dssp -TTCCCCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCC------TTCCCTTSCC-HHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred -CCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCC------cccCCCCCCC-HHHHHHHcCCHHHHHHHHHCCCCC
Confidence 00111122334677777777777777777777776321 4456667777 777777777777777777777766
Q ss_pred CCCCCCccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccc
Q 039985 169 KGVPNHKKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKW 248 (357)
Q Consensus 169 ~~~~~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~ 248 (357)
+ .++..|.||||+|+..|+.+++++|+++|++++ .+|..|+||||+|+..|+.+++++|++ .+++
T Consensus 138 ~-------~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~---~~~~~g~t~L~~A~~~~~~~~v~~Ll~-----~gad 202 (237)
T 3b7b_A 138 N-------IRDNEENICLHWAAFSGCVDIAEILLAAKCDLH---AVNIHGDSPLHIAARENRYDCVVLFLS-----RDSD 202 (237)
T ss_dssp T-------CCCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTT---CCCTTCCCHHHHHHHTTCHHHHHHHHT-----TTCC
T ss_pred C-------ccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCC---CcCCCCCCHHHHHHHhCCHhHHHHHHH-----cCCC
Confidence 5 444457777777777777777777777777776 677777777777777777777777766 5667
Q ss_pred cccccCCCCcHHHHHHHcCC
Q 039985 249 ASRIDKKGYTLLHHVADMKH 268 (357)
Q Consensus 249 ~~~~d~~G~TpLh~Aa~~g~ 268 (357)
++.+|.+|+||||+|+..|+
T Consensus 203 ~~~~d~~g~t~l~~A~~~~~ 222 (237)
T 3b7b_A 203 VTLKNKEGETPLQCASLNSQ 222 (237)
T ss_dssp TTCCCTTSCCHHHHSCTTCH
T ss_pred CCccCCCCCCHHHHHHHHHH
Confidence 77777777777777777765
|
| >3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.7e-30 Score=220.89 Aligned_cols=146 Identities=14% Similarity=0.080 Sum_probs=135.3
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCc
Q 039985 101 NISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNW 180 (357)
Q Consensus 101 g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~ 180 (357)
+.||||.|+..|+.++++.|++.++.. .+..|..|.| |||+|+..|+.++|++|+++|++++ .++.
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~------~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~g~~~~-------~~~~ 67 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNL------VNKPDERGFT-PLIWASAFGEIETVRFLLEWGADPH-------ILAK 67 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGG------GGCCCTTSCC-HHHHHHHTTCHHHHHHHHHHTCCTT-------CCCT
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCccc------ccCCCCCCCC-HHHHHHHcCCHHHHHHHHHcCCCch-------hhcc
Confidence 468999999999999999999998762 4567899999 9999999999999999999999987 5566
Q ss_pred CcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcHH
Q 039985 181 AIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTLL 260 (357)
Q Consensus 181 ~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpL 260 (357)
.|.||||+|+..|+.+++++|+++|++++ .+|..|+||||+|+..|+.+++++|++ .+++++.+|..|.|||
T Consensus 68 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---~~~~~g~t~L~~A~~~~~~~~v~~Ll~-----~ga~~~~~~~~g~t~l 139 (172)
T 3v30_A 68 ERESALSLASTGGYTDIVGLLLERDVDIN---IYDWNGGTPLLYAVRGNHVKCVEALLA-----RGADLTTEADSGYTPM 139 (172)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHTTTCCTT---CCCTTSCCHHHHHHHTTCHHHHHHHHH-----TTCCTTCCCTTSCCHH
T ss_pred cCCCHHHHHHHCCCHHHHHHHHHcCCCCC---CCCCCCCCHHHHHHHcCCHHHHHHHHH-----cCCCccccCCCCCCHH
Confidence 69999999999999999999999999998 999999999999999999999999998 6889999999999999
Q ss_pred HHHHHcCC
Q 039985 261 HHVADMKH 268 (357)
Q Consensus 261 h~Aa~~g~ 268 (357)
|+|+..|+
T Consensus 140 ~~A~~~~~ 147 (172)
T 3v30_A 140 DLAVALGY 147 (172)
T ss_dssp HHHHHHTC
T ss_pred HHHHHhCc
Confidence 99999997
|
| >2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 | Back alignment and structure |
|---|
Probab=99.97 E-value=4.4e-31 Score=252.83 Aligned_cols=197 Identities=16% Similarity=0.086 Sum_probs=171.8
Q ss_pred CCCCCHHHHHHhcCCHHHHHHHH--------hcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCC
Q 039985 99 PANISTISLGLGKGNMLKAKKLV--------DFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKG 170 (357)
Q Consensus 99 ~~g~t~Lh~A~~~g~~~~vk~Ll--------~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~ 170 (357)
..|+||||+|+..|+.++++.|+ +.+++ .+..|..|.| |||+|+..|+.++|++|+++|++++
T Consensus 123 ~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~-------vn~~d~~g~T-pL~~A~~~g~~~iv~~Ll~~ga~~~- 193 (373)
T 2fo1_E 123 RHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGAD-------VNAMDCDENT-PLMLAVLARRRRLVAYLMKAGADPT- 193 (373)
T ss_dssp SSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCC-------TTCCCTTSCC-HHHHHHHHTCHHHHHHHHHTTCCSC-
T ss_pred cCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCC-------CcCCCCCCCC-HHHHHHHcChHHHHHHHHHCCCCCc-
Confidence 46999999999999998877776 67777 7778999999 9999999999999999999999987
Q ss_pred CCCCccCCCcCcchHHHHHHHCCCHHHHHHHHhhC---CCcccccccCCCCChHHHHHHHcC---CHHHHHHHHhhhccC
Q 039985 171 VPNHKKDKNWAIRLTLLFAASNGITEILKEIIHQH---PQAILLDNLNEKEQNILHVAVKRR---QYKVFELITKEMQLS 244 (357)
Q Consensus 171 ~~~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~---~~~~~~~~~d~~G~TpLh~A~~~g---~~~iv~~Ll~~~~~~ 244 (357)
.+|..|.||||+|+..|+.+++++|++++ .++. ..|..|+||||+|+..+ +.+++++|++.
T Consensus 194 ------~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~---~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~---- 260 (373)
T 2fo1_E 194 ------IYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIE---ELDRNGMTALMIVAHNEGRDQVASAKLLVEK---- 260 (373)
T ss_dssp ------CCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTS---CCCTTSCCHHHHHHHSCSTTHHHHHHHHHHH----
T ss_pred ------ccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChh---hcCCCCCCHHHHHHHhCCcchHHHHHHHHHC----
Confidence 55666999999999999999999999988 6777 89999999999999998 89999999984
Q ss_pred Ccccccc--------ccCCCCcHHHHHHHcCCCCC---------------CCCCCChhHHHHHhhhHHHHHHhcc-Cccc
Q 039985 245 VPKWASR--------IDKKGYTLLHHVADMKHYKE---------------GTRPGPVLQFQEELQLFEHVKEIMP-RHYA 300 (357)
Q Consensus 245 ~~~~~~~--------~d~~G~TpLh~Aa~~g~~~~---------------~~~~~t~L~la~~l~~~~~v~~ll~-~~~~ 300 (357)
+.+++. +|..|.||||+|+..|+.+. ...+.|||++|...+..+.|+.|+. +.+.
T Consensus 261 -g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~ 339 (373)
T 2fo1_E 261 -GAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASV 339 (373)
T ss_dssp -TCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCS
T ss_pred -CCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc
Confidence 455554 78899999999999998541 2345599999999999999998885 4588
Q ss_pred ccccccCCCCHHHHHhhhh
Q 039985 301 MHRDEKNKMTASDLFNLTH 319 (357)
Q Consensus 301 ~~~n~~g~~Tp~dl~~~~~ 319 (357)
+.+|..|+ ||+++|....
T Consensus 340 ~~~d~~g~-t~l~~A~~~g 357 (373)
T 2fo1_E 340 EAVDATDH-TARQLAQANN 357 (373)
T ss_dssp SCCCSSSC-CHHHHHHHTT
T ss_pred cCCCCCCC-CHHHHHHHcC
Confidence 89999999 9999997643
|
| >2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.97 E-value=6.3e-30 Score=227.54 Aligned_cols=158 Identities=13% Similarity=0.103 Sum_probs=134.2
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCC------
Q 039985 101 NISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNH------ 174 (357)
Q Consensus 101 g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~------ 174 (357)
|.||||+|+..|+.+++++|++.+++.... .....|..|.| |||+|+..|+.+++++|+++|++++.....
T Consensus 37 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~--~~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~ 113 (232)
T 2rfa_A 37 GETALHIAALYDNLEAAMVLMEAAPELVFE--PMTSELYEGQT-ALHIAVINQNVNLVRALLARGASVSARATGSVFHYR 113 (232)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHHCGGGGGC--CCCSTTTTTCC-HHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCC
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCchhccc--cccccCCCCcC-HHHHHHHcCCHHHHHHHHhCCCCCCcccCCcceeec
Confidence 779999999999999999999999871110 01456779999 999999999999999999999988732210
Q ss_pred ccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHH----HHHHhhhccCCcccc-
Q 039985 175 KKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVF----ELITKEMQLSVPKWA- 249 (357)
Q Consensus 175 ~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv----~~Ll~~~~~~~~~~~- 249 (357)
.+..+..|.||||+|+..|+.+++++|+++|++++ .+|..|+||||+|+..|+.+++ ++|++ .+.+.
T Consensus 114 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~---~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~-----~g~~~~ 185 (232)
T 2rfa_A 114 PHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIR---AQDSLGNTVLHILILQPNKTFACQMYNLLLS-----YDGGDH 185 (232)
T ss_dssp TTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTT---CCCTTSCCHHHHHHTCSCHHHHHHHHHHHHH-----TTCSCS
T ss_pred ccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCC---CCCCCCCCHHHHHHHcCChHHHHHHHHHHHh-----cCCchh
Confidence 01223469999999999999999999999999998 9999999999999999999988 88887 44444
Q ss_pred -----ccccCCCCcHHHHHHHcCCC
Q 039985 250 -----SRIDKKGYTLLHHVADMKHY 269 (357)
Q Consensus 250 -----~~~d~~G~TpLh~Aa~~g~~ 269 (357)
+.+|..|+||||+|+..|+.
T Consensus 186 ~~~~~~~~~~~g~tpl~~A~~~g~~ 210 (232)
T 2rfa_A 186 LKSLELVPNNQGLTPFKLAGVEGNI 210 (232)
T ss_dssp SCCGGGCCCTTSCCHHHHHHHHTCH
T ss_pred hhhhhccCCCCCCCHHHHHHHcCCH
Confidence 68999999999999999973
|
| >4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-29 Score=238.92 Aligned_cols=199 Identities=16% Similarity=0.117 Sum_probs=166.2
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCc
Q 039985 101 NISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNW 180 (357)
Q Consensus 101 g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~ 180 (357)
|+||||+||..|+.++|++|++.++. .+..+..+.+ |++.++..+...++..+++.+++++ .+|.
T Consensus 59 g~TpLh~A~~~g~~~iv~~Ll~~ga~-------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-------~~d~ 123 (337)
T 4g8k_A 59 GWTPLHNAVQMSREDIVELLLRHGAD-------PVLRKKNGAT-PFILAAIAGSVKLLKLFLSKGADVN-------ECDF 123 (337)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCC-------TTCCCTTCCC-HHHHHHHHTCHHHHHHHHTTTCCTT-------CBCT
T ss_pred CcCHHHHHHHcCCHHHHHHHHHcCCc-------hhhhccCCCc-hhHHHHhcccchhhHHhhhccchhh-------hhcc
Confidence 77999999999999999999999998 7778888999 9999999999999999999988877 5666
Q ss_pred CcchHHHHHHHCCCHHHHHHHHhhCCCcccc-------cccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCcccccccc
Q 039985 181 AIRLTLLFAASNGITEILKEIIHQHPQAILL-------DNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRID 253 (357)
Q Consensus 181 ~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~-------~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d 253 (357)
.|+||||+|+..|+.+++++|+++|+++... ...+..|+||||+|+.+|+.++|++||.+ .+++++.+|
T Consensus 124 ~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~----~gad~n~~d 199 (337)
T 4g8k_A 124 YGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDE----MGADVNACD 199 (337)
T ss_dssp TCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHH----SCCCTTCCC
T ss_pred CCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhc----cCCCcCccC
Confidence 7999999999999999999999999887511 23456789999999999999999999875 578899999
Q ss_pred CCCCcHHHHHHHcCCCC------------------CCCCCCChhHHHHHhhhHHHHHHhcc--CcccccccccCCCCHHH
Q 039985 254 KKGYTLLHHVADMKHYK------------------EGTRPGPVLQFQEELQLFEHVKEIMP--RHYAMHRDEKNKMTASD 313 (357)
Q Consensus 254 ~~G~TpLh~Aa~~g~~~------------------~~~~~~t~L~la~~l~~~~~v~~ll~--~~~~~~~n~~g~~Tp~d 313 (357)
..|.||||+++..++.. ....+.|||+++...+..+.++.++. ..+++.+|.+|. ||++
T Consensus 200 ~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~-TpL~ 278 (337)
T 4g8k_A 200 NMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGK-TALL 278 (337)
T ss_dssp TTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSC-BHHH
T ss_pred CCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCC-CHHH
Confidence 99999999888766532 11234589999999888888888885 347888999999 9999
Q ss_pred HHhhhh
Q 039985 314 LFNLTH 319 (357)
Q Consensus 314 l~~~~~ 319 (357)
+|.+..
T Consensus 279 ~A~~~g 284 (337)
T 4g8k_A 279 LAVELK 284 (337)
T ss_dssp HHHHTT
T ss_pred HHHHcC
Confidence 987543
|
| >2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A | Back alignment and structure |
|---|
Probab=99.97 E-value=4.4e-31 Score=238.88 Aligned_cols=196 Identities=12% Similarity=0.016 Sum_probs=154.1
Q ss_pred CCCCHHHHHHhcCCHH----HHHHHHhcCcchhHHHhhhhh----cCCCCCcHHHHHHHhc---CcHHHHHHHHHcCCCC
Q 039985 100 ANISTISLGLGKGNML----KAKKLVDFSAGELDELLLKKD----CTNKGNMIKAKKFVDF---SAAELVELFVKKDCTI 168 (357)
Q Consensus 100 ~g~t~Lh~A~~~g~~~----~vk~Ll~~~~~~~~~~l~~~~----~~~~g~t~pLh~A~~~---g~~~iv~~Ll~~g~~~ 168 (357)
+|+||||.|+..|+.+ ++++|++.+.+ .+. .|..|.| |||+|+.. |+.++|++|++.|+++
T Consensus 1 ~G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~-------i~~~~~~~d~~g~t-~L~~A~~~~~~g~~~~v~~Ll~~g~~~ 72 (256)
T 2etb_A 1 FDRDRLFSVVSRGVPEELTGLLEYLRWNSKY-------LTDSAYTEGSTGKT-CLMKAVLNLQDGVNACIMPLLQIDKDS 72 (256)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHHTCC-------TTSGGGSBTTTTBC-HHHHHHHTCBTTBCTTHHHHHHHHHHT
T ss_pred CCccHHHHHHHcCCHHHHHHHHHHHHHcCCC-------cccccccCCCCCCC-HHHHHHHccccchHHHHHHHHhcCCcc
Confidence 4889999999999997 55666677877 555 7999999 99999999 9999999999999876
Q ss_pred CCCCC----CccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCC-------------CChHHHHHHHcCCH
Q 039985 169 KGVPN----HKKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEK-------------EQNILHVAVKRRQY 231 (357)
Q Consensus 169 ~~~~~----~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~-------------G~TpLh~A~~~g~~ 231 (357)
+.... ...++|..|.||||+||..|+.++|++|+++|++++ .+|.. |+||||+|+..|+.
T Consensus 73 ~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~---~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~ 149 (256)
T 2etb_A 73 GNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVH---LRACGRFFQKHQGTCFYFGELPLSLAACTKQW 149 (256)
T ss_dssp TCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTT---CCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCH
T ss_pred cchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCC---cccccccccccccccccCCCCHHHHHHHcCCH
Confidence 53321 111344569999999999999999999999999998 77776 99999999999999
Q ss_pred HHHHHHHhhhccCCccccccccCCCCcHHHHHHHcCCCCCCCCCCChhHHHHHhhhHHHHHHhcc-Cccc-------ccc
Q 039985 232 KVFELITKEMQLSVPKWASRIDKKGYTLLHHVADMKHYKEGTRPGPVLQFQEELQLFEHVKEIMP-RHYA-------MHR 303 (357)
Q Consensus 232 ~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~~~~~t~L~la~~l~~~~~v~~ll~-~~~~-------~~~ 303 (357)
+++++|++... .+++++.+|.+|+||||+|+..++.. ...... ..+.++.++. ..+. +.+
T Consensus 150 ~~v~~Ll~~~~--~ga~~n~~d~~g~TpLh~A~~~~~~~--------~~~~~~--~~~iv~~Ll~~ga~~~~~~~~~~~~ 217 (256)
T 2etb_A 150 DVVTYLLENPH--QPASLEATDSLGNTVLHALVMIADNS--------PENSAL--VIHMYDGLLQMGARLCPTVQLEEIS 217 (256)
T ss_dssp HHHHHHHHCSS--CCCCTTCCCTTSCCHHHHHHHHCCSC--------HHHHHH--HHHHHHHHHHHHHHHSTTCCGGGCC
T ss_pred HHHHHHHhccc--cCCCcCccCCCCCCHHHHHHHcccCC--------chhhHH--HHHHHHHHHHcCCCccccccccccc
Confidence 99999987311 46799999999999999999954321 110000 0113444442 2355 789
Q ss_pred cccCCCCHHHHHhhhh
Q 039985 304 DEKNKMTASDLFNLTH 319 (357)
Q Consensus 304 n~~g~~Tp~dl~~~~~ 319 (357)
|.+|. ||+++|....
T Consensus 218 d~~g~-tpL~~A~~~g 232 (256)
T 2etb_A 218 NHQGL-TPLKLAAKEG 232 (256)
T ss_dssp CTTSC-CHHHHHHHTT
T ss_pred CCCCC-CHHHHHHHhC
Confidence 99999 9999997644
|
| >2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-29 Score=223.56 Aligned_cols=149 Identities=9% Similarity=0.052 Sum_probs=138.2
Q ss_pred CCCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCC
Q 039985 99 PANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDK 178 (357)
Q Consensus 99 ~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~ 178 (357)
..|.||||+|+..|+.+++++|++.++.+ .+..+..|.| |||+|+..|+.+++++|+++|++++ .+
T Consensus 56 ~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~------~~~~~~~g~t-~L~~A~~~~~~~~~~~Ll~~g~~~~-------~~ 121 (223)
T 2f8y_A 56 NMGRTPLHAAVSADAQGVFQILIRNRATD------LDARMHDGTT-PLILAARLAVEGMLEDLINSHADVN-------AV 121 (223)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHBTTSC------TTCCCTTCCC-HHHHHHHHTCHHHHHHHHHTTCCTT-------CB
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCC------cccCCCCCCc-HHHHHHHhCcHHHHHHHHHcCCCCc-------Cc
Confidence 45889999999999999999999998731 5567899999 9999999999999999999999987 55
Q ss_pred CcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCc
Q 039985 179 NWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYT 258 (357)
Q Consensus 179 ~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~T 258 (357)
+..|.||||+|+..|+.+++++|+++|++++ .+|..|+||||+|+..|+.+++++|++ .+++++.+|..|.|
T Consensus 122 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---~~~~~g~t~L~~A~~~~~~~~v~~Ll~-----~ga~~~~~~~~g~t 193 (223)
T 2f8y_A 122 DDLGKSALHWAAAVNNVDAAVVLLKNGANKD---MQNNREETPLFLAAREGSYETAKVLLD-----HFANRDITDHMDRL 193 (223)
T ss_dssp CTTSCBHHHHHHHTTCHHHHHHHHHTTCCTT---CCCTTCCCHHHHHHHHTCHHHHHHHHH-----TTCCTTCCCTTCCC
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC---CcCCCCcCHHHHHHHcCCHHHHHHHHH-----cCCCCccccccCCC
Confidence 6669999999999999999999999999998 999999999999999999999999998 67899999999999
Q ss_pred HHHHHHHcCCC
Q 039985 259 LLHHVADMKHY 269 (357)
Q Consensus 259 pLh~Aa~~g~~ 269 (357)
|||+|+..|+.
T Consensus 194 ~l~~A~~~~~~ 204 (223)
T 2f8y_A 194 PRDIAQERMHH 204 (223)
T ss_dssp HHHHHHHTTCH
T ss_pred HHHHHHHhcch
Confidence 99999999973
|
| >2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.5e-30 Score=223.04 Aligned_cols=150 Identities=15% Similarity=0.104 Sum_probs=140.6
Q ss_pred CCCCCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCcc
Q 039985 97 TSPANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKK 176 (357)
Q Consensus 97 ~~~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~ 176 (357)
.+..|.||||+|+..|+.+++++|++.+.+ .+..+..|.| |||+|+..|+.+++++|+++|++++
T Consensus 31 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~-------~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~g~~~~------- 95 (192)
T 2rfm_A 31 RDSYNRTPLMVACMLGMENAIDKLVENFDK-------LEDKDIEGST-ALIWAVKNNRLGIAEKLLSKGSNVN------- 95 (192)
T ss_dssp CCTTCCCHHHHHHHHTCGGGHHHHHHHHCC-------TTCCCTTSCC-HHHHHHHTTCHHHHHHHHHHTCCTT-------
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHhccc-------cccccccCcc-HHHHHHHcCCHHHHHHHHHCCCCCC-------
Confidence 345699999999999999999999999887 6778999999 9999999999999999999999987
Q ss_pred CCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCC
Q 039985 177 DKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKG 256 (357)
Q Consensus 177 ~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G 256 (357)
.+|..|.||||+|+..|+.+++++|+++|++++ .+|..|+||||+|+..|+.+++++|++ .+++++.+|..|
T Consensus 96 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---~~~~~g~t~L~~A~~~~~~~~v~~Ll~-----~ga~~~~~~~~g 167 (192)
T 2rfm_A 96 TKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVN---DRNLEGETPLIVASKYGRSEIVKKLLE-----LGADISARDLTG 167 (192)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSS---CCCTTCCCHHHHHHHHTCHHHHHHHHH-----TTCCTTCBCTTS
T ss_pred CCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCC---CCCCCCCCHHHHHHHcCCHHHHHHHHH-----CCCCCCCcCCCC
Confidence 566679999999999999999999999999998 999999999999999999999999998 688999999999
Q ss_pred CcHHHHHHHcCCC
Q 039985 257 YTLLHHVADMKHY 269 (357)
Q Consensus 257 ~TpLh~Aa~~g~~ 269 (357)
.||||+|+..|+.
T Consensus 168 ~t~l~~A~~~~~~ 180 (192)
T 2rfm_A 168 LTAEASARIFGRQ 180 (192)
T ss_dssp CBHHHHHHHTTCH
T ss_pred CCHHHHHHHhCcH
Confidence 9999999999973
|
| >3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A | Back alignment and structure |
|---|
Probab=99.97 E-value=3.7e-30 Score=217.80 Aligned_cols=147 Identities=14% Similarity=0.113 Sum_probs=138.6
Q ss_pred CCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCC
Q 039985 100 ANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKN 179 (357)
Q Consensus 100 ~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~ 179 (357)
.|.||||.|+..|+.++++.|++.+.. .+..|..|.| |||+|+..|+.+++++|+++|++++ .++
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~-------~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~g~~~~-------~~~ 66 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENV-------INHTDEEGFT-PLMWAAAHGQIAVVEFLLQNGADPQ-------LLG 66 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSC-------TTCCCTTSCC-HHHHHHHTTCHHHHHHHHHTTCCTT-------CCC
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCC-------cCCCCCCCCC-HHHHHHHCCCHHHHHHHHHcCCCCC-------CcC
Confidence 378999999999999999999999987 7778999999 9999999999999999999999987 555
Q ss_pred cCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcH
Q 039985 180 WAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTL 259 (357)
Q Consensus 180 ~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~Tp 259 (357)
..|.||||+|+..|+.+++++|+++|++++ .+|..|+||||+|+..|+.+++++|++ .+++++.+|.+|.||
T Consensus 67 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---~~~~~g~t~L~~A~~~~~~~~v~~Ll~-----~g~~~~~~~~~g~t~ 138 (167)
T 3v31_A 67 KGRESALSLACSKGYTDIVKMLLDCGVDVN---EYDWNGGTPLLYAVHGNHVKCVKMLLE-----SGADPTIETDSGYNS 138 (167)
T ss_dssp TTCCCHHHHHHHHTCHHHHHHHHHHTCCTT---CCCTTSCCHHHHHHHTTCHHHHHHHHH-----TTCCTTCCCTTSCCH
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHHCCCCCC---cCCCCCCCHHHHHHHcCCHHHHHHHHH-----cCCCCCCcCCCCCCH
Confidence 669999999999999999999999999998 999999999999999999999999998 688999999999999
Q ss_pred HHHHHHcCCC
Q 039985 260 LHHVADMKHY 269 (357)
Q Consensus 260 Lh~Aa~~g~~ 269 (357)
||+|+..|+.
T Consensus 139 l~~A~~~~~~ 148 (167)
T 3v31_A 139 MDLAVALGYR 148 (167)
T ss_dssp HHHHHHHTCH
T ss_pred HHHHHHcCcH
Confidence 9999999973
|
| >1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 | Back alignment and structure |
|---|
Probab=99.97 E-value=4.6e-30 Score=233.91 Aligned_cols=195 Identities=15% Similarity=0.055 Sum_probs=169.5
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhc-CCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCC
Q 039985 101 NISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDC-TNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKN 179 (357)
Q Consensus 101 g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~-~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~ 179 (357)
|.|+||.|++.|+.++++.|++.+++ .+.. +..|.| |||+|+..|+.+++++|+++|++++ .++
T Consensus 5 g~~~L~~A~~~g~~~~v~~Ll~~g~~-------~~~~~~~~g~t-~L~~A~~~g~~~~v~~Ll~~g~~~~-------~~~ 69 (285)
T 1wdy_A 5 DNHLLIKAVQNEDVDLVQQLLEGGAN-------VNFQEEEGGWT-PLHNAVQMSREDIVELLLRHGADPV-------LRK 69 (285)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTTCC-------TTCCCTTTCCC-HHHHHHHTTCHHHHHHHHHTTCCTT-------CCC
T ss_pred cchHHHHHHHcCCHHHHHHHHHcCCC-------cccccCCCCCc-HHHHHHHcCCHHHHHHHHHcCCCCc-------ccC
Confidence 77999999999999999999999987 4545 778999 9999999999999999999999987 556
Q ss_pred cCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccc-------
Q 039985 180 WAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRI------- 252 (357)
Q Consensus 180 ~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~------- 252 (357)
..|.||||+|+..|+.+++++|+++|+++. .+|..|+||||+|+..|+.+++++|++ .+.+++.+
T Consensus 70 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---~~~~~g~t~L~~A~~~~~~~~~~~Ll~-----~g~~~~~~~~~~~~~ 141 (285)
T 1wdy_A 70 KNGATPFLLAAIAGSVKLLKLFLSKGADVN---ECDFYGFTAFMEAAVYGKVKALKFLYK-----RGANVNLRRKTKEDQ 141 (285)
T ss_dssp TTCCCHHHHHHHHTCHHHHHHHHHTTCCTT---CBCTTCCBHHHHHHHTTCHHHHHHHHH-----TTCCTTCCCCCCHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCC---ccCcccCCHHHHHHHhCCHHHHHHHHH-----hCCCcccccccHHHH
Confidence 669999999999999999999999999998 899999999999999999999999998 56677666
Q ss_pred ---cCCCCcHHHHHHHcCCCCC---------------CCCCCChhHHHHHhhh----HHHHHHhcc-CcccccccccCCC
Q 039985 253 ---DKKGYTLLHHVADMKHYKE---------------GTRPGPVLQFQEELQL----FEHVKEIMP-RHYAMHRDEKNKM 309 (357)
Q Consensus 253 ---d~~G~TpLh~Aa~~g~~~~---------------~~~~~t~L~la~~l~~----~~~v~~ll~-~~~~~~~n~~g~~ 309 (357)
+..|.||||+|+..|+.+. ...+.|||+.+...+. .+.++.++. +.+.+.+|..|.
T Consensus 142 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~- 220 (285)
T 1wdy_A 142 ERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGK- 220 (285)
T ss_dssp HHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSC-
T ss_pred HhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCC-
Confidence 8889999999999998541 2344599999988766 555666664 347888999999
Q ss_pred CHHHHHhhhh
Q 039985 310 TASDLFNLTH 319 (357)
Q Consensus 310 Tp~dl~~~~~ 319 (357)
||+++|....
T Consensus 221 t~L~~A~~~~ 230 (285)
T 1wdy_A 221 TPLILAVEKK 230 (285)
T ss_dssp CHHHHHHHTT
T ss_pred cHHHHHHHcC
Confidence 9999997543
|
| >1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E | Back alignment and structure |
|---|
Probab=99.97 E-value=2.1e-31 Score=238.14 Aligned_cols=186 Identities=14% Similarity=0.119 Sum_probs=155.4
Q ss_pred CCCCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccC
Q 039985 98 SPANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKD 177 (357)
Q Consensus 98 ~~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~ 177 (357)
+..|.||||+|+..|+.++++.|++.+..... ..+..|..|.| |||+|+..|+.++|++|+++|++++ .
T Consensus 5 d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~---~~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~g~~~~-------~ 73 (236)
T 1ikn_D 5 TEDGDSFLHLAIIHEEKALTMEVIRQVKGDLA---FLNFQNNLQQT-PLHLAVITNQPEIAEALLGAGCDPE-------L 73 (236)
T ss_dssp --CCCCTTHHHHHTTCSSSSSCCCC-----CC---CCCCCCTTCCC-HHHHHHHTTCHHHHHCCCSCCCCSC-------C
T ss_pred CCCCCchhHHHHHcCChhHHHHHHHHhhccHH---HhhccCCCCCC-HHHHHHHcCCHHHHHHHHHcCCCCC-------C
Confidence 45699999999999999999999988763100 14568899999 9999999999999999999999987 5
Q ss_pred CCcCcchHHHHHHHCCCHHHHHHHHhhCCCcc---cccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccC
Q 039985 178 KNWAIRLTLLFAASNGITEILKEIIHQHPQAI---LLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDK 254 (357)
Q Consensus 178 ~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~---~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~ 254 (357)
++..|.||||+|+..|+.+++++|++++++.. .++..|..|+||||+|+..|+.+++++|++ .+++++.+|.
T Consensus 74 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-----~g~~~~~~~~ 148 (236)
T 1ikn_D 74 RDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVS-----LGADVNAQEP 148 (236)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHH-----HTCCTTCCCT
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHH-----cCCCCCCCCC
Confidence 66679999999999999999999999997631 114788999999999999999999999998 6789999998
Q ss_pred -CCCcHHHHHHHcCCCCCCCCCCChhHHHHHhhhHHHHHHhcc-CcccccccccCCCCHHHHHhhhh
Q 039985 255 -KGYTLLHHVADMKHYKEGTRPGPVLQFQEELQLFEHVKEIMP-RHYAMHRDEKNKMTASDLFNLTH 319 (357)
Q Consensus 255 -~G~TpLh~Aa~~g~~~~~~~~~t~L~la~~l~~~~~v~~ll~-~~~~~~~n~~g~~Tp~dl~~~~~ 319 (357)
.|+||||+|+..|+. +.++.++. +.+.+.+|..|. ||+++|....
T Consensus 149 ~~g~tpL~~A~~~~~~-------------------~~v~~Ll~~ga~~~~~~~~g~-tpl~~A~~~~ 195 (236)
T 1ikn_D 149 CNGRTALHLAVDLQNP-------------------DLVSLLLKCGADVNRVTYQGY-SPYQLTWGRP 195 (236)
T ss_dssp TTCCCHHHHHHHTTCH-------------------HHHHHHHTTTCCSCCCCTTCC-CGGGGCTTSS
T ss_pred CCCCCHHHHHHHcCCH-------------------HHHHHHHHcCCCCCcccCCCC-CHHHHHHccC
Confidence 999999999999973 35666664 357889999999 9999997543
|
| >3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.9e-30 Score=236.69 Aligned_cols=142 Identities=11% Similarity=0.079 Sum_probs=75.3
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCc
Q 039985 101 NISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNW 180 (357)
Q Consensus 101 g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~ 180 (357)
|.||||+|+..|+.+++++|++.+++ .+.. +|.| |||+|+..|+.++|++|+++|++++ .+|.
T Consensus 31 g~t~L~~A~~~g~~~~v~~Ll~~g~~-------~~~~--~g~t-~L~~A~~~g~~~~v~~Ll~~ga~~~-------~~d~ 93 (285)
T 3kea_A 31 GHSASYYAIADNNVRLVCTLLNAGAL-------KNLL--ENEF-PLHQAATLEDTKIVKILLFSGLDDS-------QFDD 93 (285)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTGG-------GSCC--TTCC-HHHHHTTSSSCHHHHHHHHTTCCTT-------CCCT
T ss_pred CCCHHHHHHHcCCHHHHHHHHhCCCC-------CCCC--CCCC-HHHHHHHcCCHHHHHHHHHCCCCCC-------CcCC
Confidence 44555555555555555555555544 2222 2555 5555555555555555555555544 3333
Q ss_pred CcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCC-ChHHHHHHHcCCHHHHHHHHhhhccCCccccccccC-CCCc
Q 039985 181 AIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKE-QNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDK-KGYT 258 (357)
Q Consensus 181 ~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G-~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~-~G~T 258 (357)
.|+||||+|+..|+.+++++|+++|+++. .+|..| .||||+|+..|+.+++++|++. +... .|. .|.|
T Consensus 94 ~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~---~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~-----g~~~--~~~~~g~t 163 (285)
T 3kea_A 94 KGNTALYYAVDSGNMQTVKLFVKKNWRLM---FYGKTGWKTSFYHAVMLNDVSIVSYFLSE-----IPST--FDLAILLS 163 (285)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHHCGGGG---GCSSSGGGSHHHHHHHTTCHHHHHHHHTT-----SCTT--CCCSTHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCCCCC---ccCCCCCCCHHHHHHHcCCHHHHHHHHhC-----CCcc--ccccCCcc
Confidence 45555555555555555555555555555 555555 4555555555555555555542 2222 121 5555
Q ss_pred HHHHHHHcCCC
Q 039985 259 LLHHVADMKHY 269 (357)
Q Consensus 259 pLh~Aa~~g~~ 269 (357)
|||+|+..|+.
T Consensus 164 ~L~~A~~~g~~ 174 (285)
T 3kea_A 164 CIHITIKNGHV 174 (285)
T ss_dssp HHHHHHHTTCH
T ss_pred HHHHHHHcChH
Confidence 55555555553
|
| >4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A | Back alignment and structure |
|---|
Probab=99.97 E-value=4.8e-30 Score=219.02 Aligned_cols=128 Identities=20% Similarity=0.255 Sum_probs=116.9
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCc
Q 039985 101 NISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNW 180 (357)
Q Consensus 101 g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~ 180 (357)
|.||||+|+..|+.++++.|++.+++ .+..|.+|.| |||+|+..|+.++|++|+++|++++ .+|.
T Consensus 37 g~t~l~~a~~~~~~~~~~~ll~~gad-------~~~~d~~g~T-pLh~A~~~g~~~~v~~Ll~~gadvn-------~~d~ 101 (169)
T 4gpm_A 37 GRTPLHHAAENGHKEVVKLLISKGAD-------VNAKDSDGRT-PLHHAAENGHKEVVKLLISKGADVN-------AKDS 101 (169)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCC-------TTCCCTTSCC-HHHHHHHTTCHHHHHHHHHTTCCTT-------CCCT
T ss_pred CCCHHHHHHHcCCHHHHHHHHhcccc-------hhhhccCCCC-HHHHHHHcCCHHHHHHHHHCcCCCC-------CCCC
Confidence 77999999999999999999999998 7889999999 9999999999999999999999987 6667
Q ss_pred CcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCcccccc
Q 039985 181 AIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASR 251 (357)
Q Consensus 181 ~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~ 251 (357)
.|+||||+||+.|+.++|++|+++|+++. .+|.+|+||||+|+.+|+.+++++|++ .|++++.
T Consensus 102 ~G~TpLh~A~~~g~~~~v~~Ll~~gad~~---~~d~~G~TpL~~A~~~g~~~iv~~Ll~-----~GA~ie~ 164 (169)
T 4gpm_A 102 DGRTPLHHAAENGHKEVVKLLISKGADVN---TSDSDGRTPLDLAREHGNEEVVKLLEK-----QGGWLEH 164 (169)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTCCTT---CCCTTSCCHHHHHHHTTCHHHHHHHHT-----C------
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCcc---ccCCCCCCHHHHHHHcCCHHHHHHHHH-----CCCCcCC
Confidence 79999999999999999999999999998 999999999999999999999999988 6666654
|
| >3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.9e-30 Score=245.47 Aligned_cols=184 Identities=15% Similarity=0.136 Sum_probs=153.6
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHc----CCCCCCCCC---
Q 039985 101 NISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKK----DCTIKGVPN--- 173 (357)
Q Consensus 101 g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~----g~~~~~~~~--- 173 (357)
|.||||+|+..|+.+++++|++.++. ..+.+|.| |||+|+..|+.++|++|+++ |++++....
T Consensus 53 g~t~L~~A~~~g~~~~v~~Ll~~g~~---------~~~~~g~t-~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~ 122 (364)
T 3ljn_A 53 GCTALHLACKFGCVDTAKYLASVGEV---------HSLWHGQK-PIHLAVMANKTDLVVALVEGAKERGQMPESLLNECD 122 (364)
T ss_dssp CCCHHHHHHHHCCHHHHHHHHHHCCC---------CCCBTTBC-HHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCC
T ss_pred CCcHHHHHHHcCCHHHHHHHHHCCCC---------ccccCCCC-HHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcc
Confidence 77999999999999999999999886 12348999 99999999999999999999 666542000
Q ss_pred -------CccCCCcCcchHHHHHHHCC--CHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccC
Q 039985 174 -------HKKDKNWAIRLTLLFAASNG--ITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLS 244 (357)
Q Consensus 174 -------~~~~~~~~G~TpLh~Aa~~G--~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~ 244 (357)
..+.++..|.||||+|+..| +.++|++|+++|++++ .+|..|+||||+|+..|+.++|++|++.....
T Consensus 123 ~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~---~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~ 199 (364)
T 3ljn_A 123 EREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPT---AKDKADETPLMRAMEFRNREALDLMMDTVPSK 199 (364)
T ss_dssp CCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTT---CCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCS
T ss_pred hHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCc---ccCCCCCCHHHHHHHcCCHHHHHHHHhccccc
Confidence 00015667999999999999 9999999999999998 99999999999999999999999999842111
Q ss_pred CccccccccCCCCcHHHHHHHcCCCCC--------------CCCCCChhHHHHHhhhHHHHHHhccC
Q 039985 245 VPKWASRIDKKGYTLLHHVADMKHYKE--------------GTRPGPVLQFQEELQLFEHVKEIMPR 297 (357)
Q Consensus 245 ~~~~~~~~d~~G~TpLh~Aa~~g~~~~--------------~~~~~t~L~la~~l~~~~~v~~ll~~ 297 (357)
.+.+++.+|..|+||||+|+..|+.+. ...+.|||++|...+..+.++.|+..
T Consensus 200 ~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ 266 (364)
T 3ljn_A 200 SSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQK 266 (364)
T ss_dssp SSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTCCHHHHHHHHHH
T ss_pred ccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHHc
Confidence 223399999999999999999998651 23455999999999999998888853
|
| >2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* | Back alignment and structure |
|---|
Probab=99.97 E-value=5.4e-30 Score=217.62 Aligned_cols=149 Identities=17% Similarity=0.089 Sum_probs=138.7
Q ss_pred CCCCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccC
Q 039985 98 SPANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKD 177 (357)
Q Consensus 98 ~~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~ 177 (357)
.+.+.++||.|++.|+.+++++|++.+.+ .+..|..|.| |||+|+..|+.+++++|+++|++++ .
T Consensus 11 ~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~-------~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~g~~~~-------~ 75 (169)
T 2y1l_E 11 GSDLGKKLLEAARAGRDDEVRILMANGAD-------VNAEDASGWT-PLHLAAFNGHLEIVEVLLKNGADVN-------A 75 (169)
T ss_dssp --CHHHHHHHHHHHTCHHHHHHHHHTTCC-------TTCCCTTSCC-HHHHHHHTTCHHHHHHHHHTTCCTT-------C
T ss_pred CCcccchHHHHHHcCCHHHHHHHHHCCCC-------CCCCCCCCCC-HHHHHHHcCCHHHHHHHHHcCCCCC-------c
Confidence 34477999999999999999999999988 7778999999 9999999999999999999999887 5
Q ss_pred CCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCC
Q 039985 178 KNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGY 257 (357)
Q Consensus 178 ~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~ 257 (357)
+|..|.||||+|+..|+.+++++|+++|++++ .+|..|+||||+|+..|+.+++++|++ .+++++.+|..|.
T Consensus 76 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~---~~~~~g~t~L~~A~~~~~~~~v~~Ll~-----~g~~~~~~~~~g~ 147 (169)
T 2y1l_E 76 VDHAGMTPLRLAALFGHLEIVEVLLKNGADVN---ANDMEGHTPLHLAAMFGHLEIVEVLLK-----NGADVNAQDKFGK 147 (169)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT---CCCTTSCCHHHHHHHTTCHHHHHHHHH-----TTCCTTCCCTTSC
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC---CCCCCCCCHHHHHHHcCCHHHHHHHHH-----cCCCCCCcCCCCC
Confidence 56669999999999999999999999999998 999999999999999999999999998 6789999999999
Q ss_pred cHHHHHHHcCCC
Q 039985 258 TLLHHVADMKHY 269 (357)
Q Consensus 258 TpLh~Aa~~g~~ 269 (357)
||||+|+..|+.
T Consensus 148 t~l~~A~~~~~~ 159 (169)
T 2y1l_E 148 TAFDISIDNGNE 159 (169)
T ss_dssp CHHHHHHHTTCH
T ss_pred CHHHHHHHhCCH
Confidence 999999999973
|
| >3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=8.1e-30 Score=235.11 Aligned_cols=168 Identities=12% Similarity=0.044 Sum_probs=126.4
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCc
Q 039985 101 NISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNW 180 (357)
Q Consensus 101 g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~ 180 (357)
|.||||+|+..|+.+++++|++.+++ .+..|..|.| |||+|+..|+.+++++|+++|++++. +.
T Consensus 92 g~t~L~~A~~~g~~~~v~~Ll~~ga~-------~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~g~~~~~--------~~ 155 (285)
T 3d9h_A 92 HVSPLHEACLGGHLSCVKILLKHGAQ-------VNGVTADWHT-PLFNACVSGSWDCVNLLLQHGASVQP--------ES 155 (285)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCC-------SSCCCTTCCC-HHHHHHHHTCHHHHHHHHHTTCCSSC--------SC
T ss_pred CCCHHHHHHHCCcHHHHHHHHHCCCC-------CCCCCCCCCC-HHHHHHHcCHHHHHHHHHHCCCCCCC--------CC
Confidence 66888888888888888888888777 6667788888 88888888888888888888877651 12
Q ss_pred CcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcHH
Q 039985 181 AIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTLL 260 (357)
Q Consensus 181 ~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpL 260 (357)
.|.||||+|+..|+.+++++|+++|+++. .+|..|+||||+|+..|+.+++++|++ .+++++. |..|+|||
T Consensus 156 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~---~~d~~g~t~L~~A~~~~~~~~v~~Ll~-----~ga~~~~-~~~g~t~L 226 (285)
T 3d9h_A 156 DLASPIHEAARRGHVECVNSLIAYGGNID---HKISHLGTPLYLACENQQRACVKKLLE-----SGADVNQ-GKGQDSPL 226 (285)
T ss_dssp TTSCHHHHHHHHTCHHHHHHHHHTTCCTT---CCBTTTBCHHHHHHHTTCHHHHHHHHH-----TTCCTTC-CBTTBCHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCC---CcCCCCCCHHHHHHHcCcHHHHHHHHH-----CCCCCCC-CCCCCCHH
Confidence 27888888888888888888888888877 778888888888888888888888877 4566663 77888888
Q ss_pred HHHHHcCCCCC--------------CCCCCChhHHHHHhhhHHHHHHhc
Q 039985 261 HHVADMKHYKE--------------GTRPGPVLQFQEELQLFEHVKEIM 295 (357)
Q Consensus 261 h~Aa~~g~~~~--------------~~~~~t~L~la~~l~~~~~v~~ll 295 (357)
|+|+..|+.+. +..+.|||++|.. ..+.++.++
T Consensus 227 ~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~--~~~~~~~Ll 273 (285)
T 3d9h_A 227 HAVVRTASEELACLLMDFGADTQAKNAEGKRPVELVPP--ESPLAQLFL 273 (285)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSCT--TSHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHhcC--ccHHHHHHH
Confidence 88888887541 2344488887762 334455444
|
| >2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-30 Score=249.55 Aligned_cols=184 Identities=11% Similarity=0.043 Sum_probs=160.2
Q ss_pred CCCCCCCCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcC---CCCCC
Q 039985 94 SSTTSPANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKD---CTIKG 170 (357)
Q Consensus 94 ~~~~~~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g---~~~~~ 170 (357)
.+..+..|.||||+|+..|+.+++++|++.+++ .+..|..|.| |||+|+..|+.+++++|++++ ++++
T Consensus 159 vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~-------~~~~~~~g~t-~L~~A~~~g~~~~v~~Ll~~~~~~~~~~- 229 (373)
T 2fo1_E 159 VNAMDCDENTPLMLAVLARRRRLVAYLMKAGAD-------PTIYNKSERS-ALHQAAANRDFGMMVYMLNSTKLKGDIE- 229 (373)
T ss_dssp TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-------SCCCCTTCCC-HHHHHHHTTCHHHHHHHTTSHHHHHTTS-
T ss_pred CcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCC-------CcccCCCCCC-HHHHHHHCCCHHHHHHHHhcCccccChh-
Confidence 344456799999999999999999999999998 7788999999 999999999999999999987 5665
Q ss_pred CCCCccCCCcCcchHHHHHHHCC---CHHHHHHHHhhCCCccc-----ccccCCCCChHHHHHHHcCCHHHHHHHHhhhc
Q 039985 171 VPNHKKDKNWAIRLTLLFAASNG---ITEILKEIIHQHPQAIL-----LDNLNEKEQNILHVAVKRRQYKVFELITKEMQ 242 (357)
Q Consensus 171 ~~~~~~~~~~~G~TpLh~Aa~~G---~~~iv~~Ll~~~~~~~~-----~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~ 242 (357)
.+|..|.||||+|+..| +.+++++|+++|+++.. .+..|..|+||||+|+..|+.++|++|++.
T Consensus 230 ------~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~-- 301 (373)
T 2fo1_E 230 ------ELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGE-- 301 (373)
T ss_dssp ------CCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHH--
T ss_pred ------hcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHh--
Confidence 55666999999999998 89999999999999871 013678999999999999999999999985
Q ss_pred cCCccccccccCCCCcHHHHHHHcCCCCC--------------CCCCCChhHHHHHhhhHHHHHHhcc
Q 039985 243 LSVPKWASRIDKKGYTLLHHVADMKHYKE--------------GTRPGPVLQFQEELQLFEHVKEIMP 296 (357)
Q Consensus 243 ~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~--------------~~~~~t~L~la~~l~~~~~v~~ll~ 296 (357)
.+.+++.+|.+|+||||+|+..|+.+. +..+.|||++|...+..+.++.|+.
T Consensus 302 --~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~l~~A~~~g~~~iv~~Ll~ 367 (373)
T 2fo1_E 302 --KGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFDR 367 (373)
T ss_dssp --SCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHHHHTTCHHHHHHHHT
T ss_pred --cCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCCCHHHHHHHcCCHHHHHHHHh
Confidence 458999999999999999999998651 2345599999999988888877763
|
| >3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.8e-29 Score=237.01 Aligned_cols=198 Identities=14% Similarity=0.066 Sum_probs=169.4
Q ss_pred CCCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCC
Q 039985 99 PANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDK 178 (357)
Q Consensus 99 ~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~ 178 (357)
.+|.|+||.|++.|+.+.++.|+.....+ .+..|..|.| |||+|+..|+.++|++|+++|++++ .+
T Consensus 22 ~~~~~~L~~A~~~g~~~~v~~ll~~~~~~------~~~~d~~g~t-~L~~A~~~g~~~~v~~Ll~~g~~~~-------~~ 87 (351)
T 3utm_A 22 EYKKDELLEAARSGNEEKLMALLTPLNVN------CHASDGRKST-PLHLAAGYNRVRIVQLLLQHGADVH-------AK 87 (351)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHCCTTTTT------CCCSSTTCCC-HHHHHHHTTCHHHHHHHHHTTCCTT-------CC
T ss_pred cccchhHHHHHHcCCHHHHHHHHHhcCCC------cccCCCCCCC-HHHHHHHcCCHHHHHHHHHcCCCCC-------cc
Confidence 34789999999999999999999763331 5668899999 9999999999999999999999987 56
Q ss_pred CcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCcccccc-------
Q 039985 179 NWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASR------- 251 (357)
Q Consensus 179 ~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~------- 251 (357)
|..|.||||+|+..|+.+++++|+++|+++. ..|..|+||||+|+..|+.+++++|++. +.+++.
T Consensus 88 ~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~---~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-----g~~~~~~~~~g~~ 159 (351)
T 3utm_A 88 DKGGLVPLHNACSYGHYEVTELLLKHGACVN---AMDLWQFTPLHEAASKNRVEVCSLLLSH-----GADPTLVNCHGKS 159 (351)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT---CCCTTCCCHHHHHHHTTCHHHHHHHHHT-----TCCTTCCCTTSCC
T ss_pred CCCCCcHHHHHHHCCCHHHHHHHHHCCCCCC---CCCCCCCCHHHHHHHcCCHHHHHHHHHc-----CCCCccccCCCCc
Confidence 6679999999999999999999999999998 8999999999999999999999999983 444443
Q ss_pred -----------------------------------------------ccCCCCcHHHHHHHcCCCC--------------
Q 039985 252 -----------------------------------------------IDKKGYTLLHHVADMKHYK-------------- 270 (357)
Q Consensus 252 -----------------------------------------------~d~~G~TpLh~Aa~~g~~~-------------- 270 (357)
.+..|.||||+|+..++..
T Consensus 160 ~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~ 239 (351)
T 3utm_A 160 AVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGAN 239 (351)
T ss_dssp HHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCC
T ss_pred chHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCC
Confidence 4467889999999997642
Q ss_pred ---CCCCCCChhHHHHHhhhHHHHHHhcc-CcccccccccCCCCHHHHHhhhh
Q 039985 271 ---EGTRPGPVLQFQEELQLFEHVKEIMP-RHYAMHRDEKNKMTASDLFNLTH 319 (357)
Q Consensus 271 ---~~~~~~t~L~la~~l~~~~~v~~ll~-~~~~~~~n~~g~~Tp~dl~~~~~ 319 (357)
....+.|||++|...+..+.++.++. +.+.+.+|..|. ||+++|....
T Consensus 240 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~-t~L~~A~~~~ 291 (351)
T 3utm_A 240 VNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQ-TALHRAALAG 291 (351)
T ss_dssp TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSC-CHHHHHHHHT
T ss_pred cCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCC-CHHHHHHHcC
Confidence 12345599999999999998988884 458888999999 9999997543
|
| >3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=99.97 E-value=5.4e-29 Score=216.42 Aligned_cols=146 Identities=16% Similarity=0.087 Sum_probs=134.7
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHc-CCCCCCCCCCccCCC
Q 039985 101 NISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKK-DCTIKGVPNHKKDKN 179 (357)
Q Consensus 101 g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~-g~~~~~~~~~~~~~~ 179 (357)
|.||||+|+..|+.+++++|++.+++ .+..+..|.| |||+|+..|+.+++++|++. +++++ .++
T Consensus 39 g~t~L~~A~~~~~~~~v~~Ll~~g~~-------~~~~~~~g~t-~l~~A~~~~~~~~~~~Ll~~~~~~~~-------~~~ 103 (201)
T 3hra_A 39 GNTPLNIAVHNNDIEIAKALIDRGAD-------INLQNSISDS-PYLYAGAQGRTEILAYMLKHATPDLN-------KHN 103 (201)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTTCC-------TTCCCTTSCC-HHHHHHHTTCHHHHHHHHHHSCCCTT-------CCC
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCC-------CCCCCCCCCC-HHHHHHHcCCHHHHHHHHhccCcccc-------ccc
Confidence 78999999999999999999999998 7788999999 99999999999999999954 55655 556
Q ss_pred cCcchHHHHHHHCCCHHHHHHHHhhC-CCcccccccCCCCChHHHHHHHcCC-----HHHHHHHHhhhccCCcccccccc
Q 039985 180 WAIRLTLLFAASNGITEILKEIIHQH-PQAILLDNLNEKEQNILHVAVKRRQ-----YKVFELITKEMQLSVPKWASRID 253 (357)
Q Consensus 180 ~~G~TpLh~Aa~~G~~~iv~~Ll~~~-~~~~~~~~~d~~G~TpLh~A~~~g~-----~~iv~~Ll~~~~~~~~~~~~~~d 253 (357)
..|.||||+|+..|+.+++++|+++| ++++ .+|..|+||||+|+..++ .+++++|++ .+++++.+|
T Consensus 104 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~---~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~-----~ga~~~~~~ 175 (201)
T 3hra_A 104 RYGGNALIPAAEKGHIDNVKLLLEDGREDID---FQNDFGYTALIEAVGLREGNQLYQDIVKLLME-----NGADQSIKD 175 (201)
T ss_dssp TTSCCSHHHHHHTTCHHHHHHHHHHCCCCTT---CCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHH-----TTCCTTCCC
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHHcCCCCcC---CCCCCCCCHHHHHHHhccchhhHHHHHHHHHH-----CCCCCCccC
Confidence 66999999999999999999999999 6776 999999999999999998 999999998 688999999
Q ss_pred CCCCcHHHHHHHcCCC
Q 039985 254 KKGYTLLHHVADMKHY 269 (357)
Q Consensus 254 ~~G~TpLh~Aa~~g~~ 269 (357)
..|+||||+|+..|+.
T Consensus 176 ~~g~t~l~~A~~~~~~ 191 (201)
T 3hra_A 176 NSGRTAMDYANQKGYT 191 (201)
T ss_dssp TTSCCHHHHHHHHTCH
T ss_pred CCCCCHHHHHHHcCCH
Confidence 9999999999999973
|
| >2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.5e-30 Score=235.30 Aligned_cols=204 Identities=13% Similarity=0.090 Sum_probs=152.6
Q ss_pred CCCCCCCHHHHHHhcCCHHHHHHHHhcCcc---hhHHHhhhhhcCCCCCcHHHHHHHhc---CcHHHHHHHHHcCCCCCC
Q 039985 97 TSPANISTISLGLGKGNMLKAKKLVDFSAG---ELDELLLKKDCTNKGNMIKAKKFVDF---SAAELVELFVKKDCTIKG 170 (357)
Q Consensus 97 ~~~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~---~~~~~l~~~~~~~~g~t~pLh~A~~~---g~~~iv~~Ll~~g~~~~~ 170 (357)
.+..|.||||.|+..|+.++++.|++.+.. +++.. ....|..|.| |||+|+.. |+.++|++|+++|++...
T Consensus 9 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~--~~~~~~~g~t-pL~~A~~~~~~g~~~~v~~Ll~~ga~~~~ 85 (273)
T 2pnn_A 9 PRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDS--EFKDPETGKT-CLLKAMLNLHNGQNDTIALLLDVARKTDS 85 (273)
T ss_dssp --CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSG--GGSCTTTCCC-HHHHHHHSCBTTBCHHHHHHHHHHHHTTC
T ss_pred CCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCc--ccccCcCCCC-HHHHHHHHHhcCChHHHHHHHHhhccccc
Confidence 445699999999999999999999975322 11100 0135789999 99999987 999999999999876432
Q ss_pred C----CCCccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCC--------------CCChHHHHHHHcCCHH
Q 039985 171 V----PNHKKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNE--------------KEQNILHVAVKRRQYK 232 (357)
Q Consensus 171 ~----~~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~--------------~G~TpLh~A~~~g~~~ 232 (357)
+ ......+|..|.||||+||..|+.++|++|+++|++++ .+|. .|+||||+|+..|+.+
T Consensus 86 ~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~---~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~ 162 (273)
T 2pnn_A 86 LKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQ---AAANGDFFKKTKGRPGFYFGELPLSLAACTNQLA 162 (273)
T ss_dssp HHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTT---CCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHH
T ss_pred hhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcC---ccccccccccccccccccCCCCHHHHHHHcCCHH
Confidence 1 11111355679999999999999999999999999998 7776 7999999999999999
Q ss_pred HHHHHHhhhccCCccccccccCCCCcHHHHHHHcCCCCCCCCCCChhHHHHHhhhHHHHHHhccC-ccc-------cccc
Q 039985 233 VFELITKEMQLSVPKWASRIDKKGYTLLHHVADMKHYKEGTRPGPVLQFQEELQLFEHVKEIMPR-HYA-------MHRD 304 (357)
Q Consensus 233 iv~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~~~~~t~L~la~~l~~~~~v~~ll~~-~~~-------~~~n 304 (357)
++++|++... .+++++.+|.+|+||||+|+..|+.. ..... ...+.++.++.. .+. +.+|
T Consensus 163 ~v~~Ll~~~~--~gad~~~~d~~g~tpLh~A~~~~~~~--------~~~~~--~~~~~v~~Ll~~ga~~n~~~~~~~~~d 230 (273)
T 2pnn_A 163 IVKFLLQNSW--QPADISARDSVGNTVLHALVEVADNT--------VDNTK--FVTSMYNEILILGAKLHPTLKLEEITN 230 (273)
T ss_dssp HHHHHHHCSS--CCCCTTCCCTTSCCHHHHHHHHCCSC--------HHHHH--HHHHHHHHHHHHHHHHCTTCCGGGCCC
T ss_pred HHHHHHhccc--CCCCceeeCCCCCcHHHHHHHccCcc--------hhHHH--HHHHHHHHHHHhhhhcccccccccccC
Confidence 9999987311 36799999999999999999998732 00000 012334444422 233 3589
Q ss_pred ccCCCCHHHHHhhhh
Q 039985 305 EKNKMTASDLFNLTH 319 (357)
Q Consensus 305 ~~g~~Tp~dl~~~~~ 319 (357)
.+|. ||+++|....
T Consensus 231 ~~g~-TpL~~A~~~g 244 (273)
T 2pnn_A 231 RKGL-TPLALAASSG 244 (273)
T ss_dssp TTSC-CHHHHHHHTT
T ss_pred CCCC-CHHHHHHHhC
Confidence 9999 9999997543
|
| >1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 | Back alignment and structure |
|---|
Probab=99.96 E-value=1.9e-29 Score=210.54 Aligned_cols=144 Identities=15% Similarity=0.090 Sum_probs=134.6
Q ss_pred CCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCcC
Q 039985 102 ISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNWA 181 (357)
Q Consensus 102 ~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~ 181 (357)
.|+||.|+..|+.++++.|++.+.. .. .+..|.| |||+|+..|+.+++++|+++|++++ .++..
T Consensus 3 ~~~L~~A~~~g~~~~v~~Ll~~g~~-------~~-~~~~g~t-~L~~A~~~~~~~~v~~Ll~~g~~~~-------~~~~~ 66 (153)
T 1awc_B 3 GKKLLEAARAGQDDEVRILMANGAP-------FT-TDWLGTS-PLHLAAQYGHFSTTEVLLRAGVSRD-------ARTKV 66 (153)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHTCC-------CC-CCTTCCC-HHHHHHHHTCHHHHHHHHTTTCCTT-------CCCTT
T ss_pred cHHHHHHHHcCCHHHHHHHHHcCCC-------CC-cCCCCCC-HHHHHHHcCCHHHHHHHHHcCCCCC-------CCCCC
Confidence 4899999999999999999999886 32 5888999 9999999999999999999999887 56666
Q ss_pred cchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcHHH
Q 039985 182 IRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTLLH 261 (357)
Q Consensus 182 G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLh 261 (357)
|.||||+|+..|+.+++++|+++|++++ .+|..|+||||+|+..|+.+++++|++ .+++++.+|..|.||||
T Consensus 67 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---~~~~~g~t~L~~A~~~~~~~~v~~Ll~-----~ga~~~~~~~~g~t~l~ 138 (153)
T 1awc_B 67 DRTPLHMAASEGHANIVEVLLKHGADVN---AKDMLKMTALHWATEHNHQEVVELLIK-----YGADVHTQSKFCKTAFD 138 (153)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHTTTCCTT---CCCTTSCCHHHHHHHTTCHHHHHHHHH-----TTCCTTCCCTTSCCHHH
T ss_pred CCCHHHHHHHcChHHHHHHHHHcCCCCC---CCCCCCCCHHHHHHHcCCHHHHHHHHH-----cCCCccccCCCCCCHHH
Confidence 9999999999999999999999999998 999999999999999999999999998 68899999999999999
Q ss_pred HHHHcCCC
Q 039985 262 HVADMKHY 269 (357)
Q Consensus 262 ~Aa~~g~~ 269 (357)
+|+..|+.
T Consensus 139 ~A~~~~~~ 146 (153)
T 1awc_B 139 ISIDNGNE 146 (153)
T ss_dssp HHHHTTCH
T ss_pred HHHHcCCH
Confidence 99999973
|
| >4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.3e-29 Score=238.52 Aligned_cols=255 Identities=13% Similarity=0.105 Sum_probs=175.5
Q ss_pred cccHHHHHHHHHhhhhc--ccCC-CCCCCcCcCCCCCCCCCC------CCCCCCCCCCCCCCC------CCCCC-CCCCC
Q 039985 26 HKNANKLLKKLVKEETL--CLGD-GEQNPEISLLSPESSSTS------LPNPEISSSNPESST------SSLPN-PEIFS 89 (357)
Q Consensus 26 ~~~~~~iv~~Ll~~~~~--~~d~-~g~~p~~~~~~~~~~~~~------~~~~~~~~~~~~~~~------~~~~~-~~~~~ 89 (357)
..+..++||+||++|++ ..++ .|+||++.+....+...- ............... ..... .....
T Consensus 34 ~~g~~~~V~~LL~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (337)
T 4g8k_A 34 QNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAGSVKLLKLFLS 113 (337)
T ss_dssp HTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHT
T ss_pred HcCCHHHHHHHHHCCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhcccchhhHHhhh
Confidence 34668999999999998 4554 599999866443321000 000000000000000 00000 00001
Q ss_pred CCCCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhcCcc-hhHH--HhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHH-cC
Q 039985 90 PDPESSTTSPANISTISLGLGKGNMLKAKKLVDFSAG-ELDE--LLLKKDCTNKGNMIKAKKFVDFSAAELVELFVK-KD 165 (357)
Q Consensus 90 ~~~~~~~~~~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~-~~~~--~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~-~g 165 (357)
...+.+..+..|.||||+|+..|+.++++.|++.+++ .+.. .......+..|.| |||+|+..|+.++|++||+ .|
T Consensus 114 ~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T-~L~~A~~~g~~~~v~~LL~~~g 192 (337)
T 4g8k_A 114 KGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGAT-ALMDAAEKGHVEVLKILLDEMG 192 (337)
T ss_dssp TTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCC-HHHHHHHHTCHHHHHHHHHHSC
T ss_pred ccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCc-HHHHHHHCCCHHHHHHHHhccC
Confidence 1223344566799999999999999999999999886 0000 0012235678999 9999999999999999996 58
Q ss_pred CCCCCCCCCccCCCcCcchHHHHHHHCCC----HHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhh
Q 039985 166 CTIKGVPNHKKDKNWAIRLTLLFAASNGI----TEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEM 241 (357)
Q Consensus 166 ~~~~~~~~~~~~~~~~G~TpLh~Aa~~G~----~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~ 241 (357)
++++ .++..|.||||+++..++ ..++++|+++|++++ .+|..|+||||+|+..|+.+++++|+..
T Consensus 193 ad~n-------~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n---~~d~~g~t~L~~a~~~~~~~~v~~Ll~~- 261 (337)
T 4g8k_A 193 ADVN-------ACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVN---VRGERGKTPLILAVEKKHLGLVQRLLEQ- 261 (337)
T ss_dssp CCTT-------CCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTT---CCCGGGCCHHHHHHHTTCHHHHHHHHTS-
T ss_pred CCcC-------ccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCC---CcCCCCCCHHHHHHHhhhhHHHHHHHHh-
Confidence 8887 566679999999886554 468899999999998 9999999999999999999999999875
Q ss_pred ccCCccccccccCCCCcHHHHHHHcCCCCC---------CCCCCChhHHHHHhhhHHHHHHhc
Q 039985 242 QLSVPKWASRIDKKGYTLLHHVADMKHYKE---------GTRPGPVLQFQEELQLFEHVKEIM 295 (357)
Q Consensus 242 ~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~---------~~~~~t~L~la~~l~~~~~v~~ll 295 (357)
.+.+++.+|.+|+||||+|++.|+.+. .....+||+.|...+..+.|+.|+
T Consensus 262 ---~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n~~~~L~~A~~~~~~~iv~~Ll 321 (337)
T 4g8k_A 262 ---EHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGDLVMTARRNYDHSLVKVLL 321 (337)
T ss_dssp ---TTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSSTTCCHHHHHHHTTCHHHHHHHH
T ss_pred ---cCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 578999999999999999999998541 112234555555555555555544
|
| >2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1.6e-29 Score=228.64 Aligned_cols=160 Identities=13% Similarity=0.100 Sum_probs=132.7
Q ss_pred CCCHHHHHHhc---CCHHHHHHHHhcCcch--hHHHhh--hhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCC
Q 039985 101 NISTISLGLGK---GNMLKAKKLVDFSAGE--LDELLL--KKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPN 173 (357)
Q Consensus 101 g~t~Lh~A~~~---g~~~~vk~Ll~~~~~~--~~~~l~--~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~ 173 (357)
|.||||+|+.. |+.+++++|++.+++. ...++. ....|..|.| |||+|+..|+.++|++|+++|++++....
T Consensus 43 g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t-~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~ 121 (256)
T 2etb_A 43 GKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHS-ALHIAIEKRSLQCVKLLVENGADVHLRAC 121 (256)
T ss_dssp TBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCC-HHHHHHHTTCHHHHHHHHHTTCCTTCCCC
T ss_pred CCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcccccccccccCCC-HHHHHHHcCCHHHHHHHHHcCCCCCcccc
Confidence 77999999999 9999999999988761 000000 0124578999 99999999999999999999999873222
Q ss_pred C------ccCCCcCcchHHHHHHHCCCHHHHHHHHh---hCCCcccccccCCCCChHHHHHHH--cCCHH-------HHH
Q 039985 174 H------KKDKNWAIRLTLLFAASNGITEILKEIIH---QHPQAILLDNLNEKEQNILHVAVK--RRQYK-------VFE 235 (357)
Q Consensus 174 ~------~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~---~~~~~~~~~~~d~~G~TpLh~A~~--~g~~~-------iv~ 235 (357)
. .+..+..|.||||+|+..|+.++|++|++ +|++++ .+|..|+||||+|+. .++.+ +++
T Consensus 122 ~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n---~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~ 198 (256)
T 2etb_A 122 GRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLE---ATDSLGNTVLHALVMIADNSPENSALVIHMYD 198 (256)
T ss_dssp SGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTT---CCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHH
T ss_pred cccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcC---ccCCCCCCHHHHHHHcccCCchhhHHHHHHHH
Confidence 1 00112239999999999999999999999 999998 999999999999999 88888 999
Q ss_pred HHHhhhccCCcccc-------ccccCCCCcHHHHHHHcCCC
Q 039985 236 LITKEMQLSVPKWA-------SRIDKKGYTLLHHVADMKHY 269 (357)
Q Consensus 236 ~Ll~~~~~~~~~~~-------~~~d~~G~TpLh~Aa~~g~~ 269 (357)
+|++ .++++ +.+|..|+||||+|+..|+.
T Consensus 199 ~Ll~-----~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~ 234 (256)
T 2etb_A 199 GLLQ-----MGARLCPTVQLEEISNHQGLTPLKLAAKEGKI 234 (256)
T ss_dssp HHHH-----HHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCH
T ss_pred HHHH-----cCCCcccccccccccCCCCCCHHHHHHHhCCH
Confidence 9998 56677 89999999999999999973
|
| >3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.1e-29 Score=231.29 Aligned_cols=198 Identities=13% Similarity=0.093 Sum_probs=160.9
Q ss_pred ccHHHHHHHHHhhhhcccCCCCCCCcCcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
Q 039985 27 KNANKLLKKLVKEETLCLGDGEQNPEISLLSPESSSTSLPNPEISSSNPESSTSSLPNPEIFSPDPESSTTSPANISTIS 106 (357)
Q Consensus 27 ~~~~~iv~~Ll~~~~~~~d~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~Lh 106 (357)
.++.+++++|...+.+..|..|+||++.+....... ......+. ..+. ....|.||||
T Consensus 10 ~~~~~v~~lL~~~~~~~~d~~g~t~L~~A~~~g~~~-------~v~~Ll~~-------------g~~~--~~~~g~t~L~ 67 (285)
T 3kea_A 10 WKSKQLKSFLSSKDTFKADVHGHSASYYAIADNNVR-------LVCTLLNA-------------GALK--NLLENEFPLH 67 (285)
T ss_dssp CCHHHHHHHHHSTTTTCCCTTSCCHHHHHHHTTCHH-------HHHHHHHT-------------TGGG--SCCTTCCHHH
T ss_pred cCHHHHHHHHHhCCCCccCCCCCCHHHHHHHcCCHH-------HHHHHHhC-------------CCCC--CCCCCCCHHH
Confidence 466777888877765588999999988654332200 00000000 0000 1113899999
Q ss_pred HHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCcCc-chH
Q 039985 107 LGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNWAI-RLT 185 (357)
Q Consensus 107 ~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~G-~Tp 185 (357)
+|+..|+.+++++|++.+++ .+..|..|.| |||+|+..|+.++|++|+++|++++ .++..| .||
T Consensus 68 ~A~~~g~~~~v~~Ll~~ga~-------~~~~d~~g~t-~L~~A~~~g~~~~v~~Ll~~ga~~~-------~~~~~g~~t~ 132 (285)
T 3kea_A 68 QAATLEDTKIVKILLFSGLD-------DSQFDDKGNT-ALYYAVDSGNMQTVKLFVKKNWRLM-------FYGKTGWKTS 132 (285)
T ss_dssp HHTTSSSCHHHHHHHHTTCC-------TTCCCTTSCC-HHHHHHHTTCHHHHHHHHHHCGGGG-------GCSSSGGGSH
T ss_pred HHHHcCCHHHHHHHHHCCCC-------CCCcCCCCCc-HHHHHHHcCCHHHHHHHHhcCCCCC-------ccCCCCCCCH
Confidence 99999999999999999998 7788999999 9999999999999999999999987 556668 799
Q ss_pred HHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcH-HHHHH
Q 039985 186 LLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTL-LHHVA 264 (357)
Q Consensus 186 Lh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~Tp-Lh~Aa 264 (357)
||+|+..|+.+++++|+++|++.. .. ..|+||||+|+..|+.+++++|++ .+++++.+|..|+|| ||+|+
T Consensus 133 L~~A~~~~~~~~v~~Ll~~g~~~~---~~-~~g~t~L~~A~~~g~~~~v~~Ll~-----~gad~n~~~~~g~t~~L~~A~ 203 (285)
T 3kea_A 133 FYHAVMLNDVSIVSYFLSEIPSTF---DL-AILLSCIHITIKNGHVDMMILLLD-----YMTSTNTNNSLLFIPDIKLAI 203 (285)
T ss_dssp HHHHHHTTCHHHHHHHHTTSCTTC---CC-STHHHHHHHHHHTTCHHHHHHHHH-----HHHHTCTTCCCBCCTTHHHHH
T ss_pred HHHHHHcCCHHHHHHHHhCCCccc---cc-cCCccHHHHHHHcChHHHHHHHHH-----cCCCCCcccCCCCChHHHHHH
Confidence 999999999999999999998876 22 289999999999999999999998 578999999999998 99999
Q ss_pred HcCCCC
Q 039985 265 DMKHYK 270 (357)
Q Consensus 265 ~~g~~~ 270 (357)
..|+.+
T Consensus 204 ~~~~~~ 209 (285)
T 3kea_A 204 DNKDIE 209 (285)
T ss_dssp HHTCHH
T ss_pred HcCCHH
Confidence 999855
|
| >1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A | Back alignment and structure |
|---|
Probab=99.96 E-value=2.3e-29 Score=211.46 Aligned_cols=145 Identities=13% Similarity=0.115 Sum_probs=134.9
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCc
Q 039985 101 NISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNW 180 (357)
Q Consensus 101 g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~ 180 (357)
..||||.|+..|+.++++.|++.+.+ .+..|..|.| |||+|+. |+.+++++|+++|++++ .++.
T Consensus 5 ~~~~L~~A~~~g~~~~v~~Ll~~~~~-------~~~~~~~g~t-~L~~A~~-~~~~~v~~Ll~~g~~~~-------~~~~ 68 (162)
T 1ihb_A 5 WGNELASAAARGDLEQLTSLLQNNVN-------VNAQNGFGRT-ALQVMKL-GNPEIARRLLLRGANPD-------LKDR 68 (162)
T ss_dssp CHHHHHHHHHHTCHHHHHHHTTSCCC-------TTCCCTTSCC-HHHHCCS-SCHHHHHHHHHTTCCTT-------CCCT
T ss_pred HhhHHHHHHHcCCHHHHHHHHhCCCC-------ccccCccCcc-HHHHHHc-CcHHHHHHHHHcCCCCC-------CCCC
Confidence 56899999999999999999999988 7778999999 9999999 99999999999999987 5566
Q ss_pred CcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccc-cccccCCCCcH
Q 039985 181 AIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKW-ASRIDKKGYTL 259 (357)
Q Consensus 181 ~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~-~~~~d~~G~Tp 259 (357)
.|.||||+|+..|+.+++++|+++|++++ .+|..|+||||+|+..|+.+++++|++. +.+ ++.+|..|.||
T Consensus 69 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-----g~~~~~~~~~~g~t~ 140 (162)
T 1ihb_A 69 TGFAVIHDAARAGFLDTLQTLLEFQADVN---IEDNEGNLPLHLAAKEGHLRVVEFLVKH-----TASNVGHRNHKGDTA 140 (162)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHTTCCTT---CCCTTSCCHHHHHHHTTCHHHHHHHHHH-----SCCCTTCCCTTSCCH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCC---CcCCCCCCHHHHHHHcCCHHHHHHHHHc-----cCCCCCCcCCCCCcH
Confidence 79999999999999999999999999998 9999999999999999999999999984 444 79999999999
Q ss_pred HHHHHHcCCC
Q 039985 260 LHHVADMKHY 269 (357)
Q Consensus 260 Lh~Aa~~g~~ 269 (357)
||+|+..|+.
T Consensus 141 l~~A~~~~~~ 150 (162)
T 1ihb_A 141 CDLARLYGRN 150 (162)
T ss_dssp HHHHHHTTCH
T ss_pred HHHHHHcCCH
Confidence 9999999973
|
| >1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 | Back alignment and structure |
|---|
Probab=99.96 E-value=1.3e-29 Score=233.96 Aligned_cols=174 Identities=16% Similarity=0.166 Sum_probs=146.3
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCc
Q 039985 101 NISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNW 180 (357)
Q Consensus 101 g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~ 180 (357)
|.||||+|+..|+.+++++|++.+++ .+..|..|.| |||+|+..|+.++|++|+++|++++ .++.
T Consensus 73 g~t~L~~A~~~g~~~~v~~Ll~~ga~-------~~~~~~~g~t-pL~~A~~~g~~~~v~~Ll~~g~~~~-------~~~~ 137 (299)
T 1s70_B 73 GLTALHQACIDDNVDMVKFLVENGAN-------INQPDNEGWI-PLHAAASCGYLDIAEYLISQGAHVG-------AVNS 137 (299)
T ss_dssp CCBHHHHHHHTTCHHHHHHHHHTTCC-------TTCCCTTSCC-HHHHHHHHTCHHHHHHHHHTTCCTT-------CCCT
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCC-------CCCCCCCCCc-HHHHHHHcCCHHHHHHHHhCCCCCC-------CcCC
Confidence 77999999999999999999999998 7788999999 9999999999999999999999987 5566
Q ss_pred CcchHHHHHHHCCCHHHHHHHHhh-CCCccc-----------------------ccccCCCCChHHHHHHHcCCHHHHHH
Q 039985 181 AIRLTLLFAASNGITEILKEIIHQ-HPQAIL-----------------------LDNLNEKEQNILHVAVKRRQYKVFEL 236 (357)
Q Consensus 181 ~G~TpLh~Aa~~G~~~iv~~Ll~~-~~~~~~-----------------------~~~~d~~G~TpLh~A~~~g~~~iv~~ 236 (357)
.|.||||+|+..|+.++++.|+.. +.++.. ....+..|.||||+|+..|+.+++++
T Consensus 138 ~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~ 217 (299)
T 1s70_B 138 EGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKL 217 (299)
T ss_dssp TSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHH
T ss_pred CCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHH
Confidence 699999999999999999887754 332210 02356789999999999999999999
Q ss_pred HHhhhccCCccccccccCCCCcHHHHHHHcCCCCC--------------CCCCCChhHHHHHhhhHHHHHHhc
Q 039985 237 ITKEMQLSVPKWASRIDKKGYTLLHHVADMKHYKE--------------GTRPGPVLQFQEELQLFEHVKEIM 295 (357)
Q Consensus 237 Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~--------------~~~~~t~L~la~~l~~~~~v~~ll 295 (357)
|++ .+++++.+|..|+||||+|+..|+.+. +..+.|||++|.+ ...+.++.++
T Consensus 218 Ll~-----~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~-~~~~~l~~l~ 284 (299)
T 1s70_B 218 LIQ-----ARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADE-DILGYLEELQ 284 (299)
T ss_dssp HHT-----TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTTTSCCS-GGGHHHHHHH
T ss_pred HHH-----cCCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHH-HHHHHHHHHH
Confidence 987 688999999999999999999998651 3345599999855 3344444444
|
| >1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B | Back alignment and structure |
|---|
Probab=99.96 E-value=3.9e-29 Score=208.93 Aligned_cols=144 Identities=14% Similarity=0.140 Sum_probs=132.9
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhcCc-chhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCC
Q 039985 101 NISTISLGLGKGNMLKAKKLVDFSA-GELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKN 179 (357)
Q Consensus 101 g~t~Lh~A~~~g~~~~vk~Ll~~~~-~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~ 179 (357)
|.|+||.|+..|+.++++.|++... + .+..|..|.| |||+ +..|+.+++++|+++|++++ .+|
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~-------~~~~~~~g~t-~L~~-~~~~~~~~v~~Ll~~g~~~~-------~~~ 65 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVH-------PDALNRFGKT-ALQV-MMFGSTAIALELLKQGASPN-------VQD 65 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCC-------TTCCCTTSCC-HHHH-SCTTCHHHHHHHHHTTCCTT-------CCC
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcC-------ccccCCCCCc-HHHH-HHcCCHHHHHHHHHCCCCCC-------CcC
Confidence 4589999999999999999999832 3 5668899999 9999 99999999999999999987 566
Q ss_pred cCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcH
Q 039985 180 WAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTL 259 (357)
Q Consensus 180 ~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~Tp 259 (357)
..|.||||+|+..|+.+++++|+++|++++ .+|..|+||||+|+..|+.+++++|++ . .+++.+|.+|.||
T Consensus 66 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---~~~~~g~t~L~~A~~~~~~~~v~~Ll~-----~-~~~~~~~~~g~t~ 136 (156)
T 1bd8_A 66 TSGTSPVHDAARTGFLDTLKVLVEHGADVN---VPDGTGALPIHLAVQEGHTAVVSFLAA-----E-SDLHRRDARGLTP 136 (156)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHTTCCSC---CCCTTSCCHHHHHHHHTCHHHHHHHHT-----T-SCTTCCCTTSCCH
T ss_pred CCCCCHHHHHHHcCcHHHHHHHHHcCCCCC---CcCCCCCcHHHHHHHhChHHHHHHHHh-----c-cCCCCcCCCCCCH
Confidence 679999999999999999999999999998 999999999999999999999999987 5 7899999999999
Q ss_pred HHHHHHcCCC
Q 039985 260 LHHVADMKHY 269 (357)
Q Consensus 260 Lh~Aa~~g~~ 269 (357)
||+|+..|+.
T Consensus 137 l~~A~~~~~~ 146 (156)
T 1bd8_A 137 LELALQRGAQ 146 (156)
T ss_dssp HHHHHHSCCH
T ss_pred HHHHHHcCcH
Confidence 9999999973
|
| >1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 | Back alignment and structure |
|---|
Probab=99.96 E-value=9.3e-30 Score=239.42 Aligned_cols=196 Identities=10% Similarity=0.028 Sum_probs=143.6
Q ss_pred CHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhh-cCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCcC
Q 039985 103 STISLGLGKGNMLKAKKLVDFSAGELDELLLKKD-CTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNWA 181 (357)
Q Consensus 103 t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~-~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~ 181 (357)
+.+|+|+..+..++++.|++.+.+ .+. .|..|.| |||+|+..|+.++|++||++|++++ .+|..
T Consensus 99 ~~~~~a~~~~~~~~~~~l~~~g~d-------vn~~~d~~g~T-pLh~Aa~~g~~~~v~~Ll~~Gad~n-------~~d~~ 163 (327)
T 1sw6_A 99 QQQHVSFDSLLQEVNDAFPNTQLN-------LNIPVDEHGNT-PLHWLTSIANLELVKHLVKHGSNRL-------YGDNM 163 (327)
T ss_dssp -----CHHHHHHHHHHHCTTSCCC-------SCSCCSTTCCC-HHHHHHHTTCHHHHHHHHHTTCCTT-------BCCTT
T ss_pred chhHHHHHhhHHHHHHHHHhcCCC-------cccccCCCCCc-HHHHHHHcCCHHHHHHHHHcCCCCC-------CcCCC
Confidence 567888888888999999988887 677 7889999 9999999999999999999998887 56666
Q ss_pred cchHHHHHHHCCC---HHHHHHHHhhC-CCcccccccCCCCChHHHHHHH----cCCHHHHHHHHhhhc-----------
Q 039985 182 IRLTLLFAASNGI---TEILKEIIHQH-PQAILLDNLNEKEQNILHVAVK----RRQYKVFELITKEMQ----------- 242 (357)
Q Consensus 182 G~TpLh~Aa~~G~---~~iv~~Ll~~~-~~~~~~~~~d~~G~TpLh~A~~----~g~~~iv~~Ll~~~~----------- 242 (357)
|+||||+|+..|+ .++++.|++.+ +++. .+|..|+||||+|+. .|+.+++++|++...
T Consensus 164 g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~---~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i 240 (327)
T 1sw6_A 164 GESCLVKAVKSVNNYDSGTFEALLDYLYPCLI---LEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPI 240 (327)
T ss_dssp CCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGG---EECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCE
T ss_pred CCCHHHHHHHhcccccHHHHHHHHHhhhcccc---CCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHH
Confidence 9999999999998 68888888877 4555 889999999999998 889999999987421
Q ss_pred ----cCCccccccccCCCCcHHHHHHHcC-----CCC-CCCCCCChhHHHHHhhhHHHHHHhcc-CcccccccccCCCCH
Q 039985 243 ----LSVPKWASRIDKKGYTLLHHVADMK-----HYK-EGTRPGPVLQFQEELQLFEHVKEIMP-RHYAMHRDEKNKMTA 311 (357)
Q Consensus 243 ----~~~~~~~~~~d~~G~TpLh~Aa~~g-----~~~-~~~~~~t~L~la~~l~~~~~v~~ll~-~~~~~~~n~~g~~Tp 311 (357)
...+++++.+|..|.||||+|+... +.. ....+.||||+|...+..+.|+.|+. +.+.+.+|.+|+ ||
T Consensus 241 ~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~~~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~-Tp 319 (327)
T 1sw6_A 241 QSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGL-RP 319 (327)
T ss_dssp EEC----------------CHHHHHCSHHHHHHHTTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSC-CG
T ss_pred HhhhhcccCCcccccccCCChhHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCC-CH
Confidence 0016788888888999999886310 111 23345589999888888888888884 458899999999 99
Q ss_pred HHHHhh
Q 039985 312 SDLFNL 317 (357)
Q Consensus 312 ~dl~~~ 317 (357)
+++|.+
T Consensus 320 L~~A~~ 325 (327)
T 1sw6_A 320 VDFGAG 325 (327)
T ss_dssp GGGTCC
T ss_pred HHHHHh
Confidence 999864
|
| >4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=5.5e-29 Score=228.63 Aligned_cols=150 Identities=14% Similarity=0.115 Sum_probs=138.2
Q ss_pred CCCCCCHHHHHHhcCCHHHHHHHHhcCc-chhHHHhhhhhcCCCCCcHHHHHHH-----hcCcHHHHHHHHHcCCCCCCC
Q 039985 98 SPANISTISLGLGKGNMLKAKKLVDFSA-GELDELLLKKDCTNKGNMIKAKKFV-----DFSAAELVELFVKKDCTIKGV 171 (357)
Q Consensus 98 ~~~g~t~Lh~A~~~g~~~~vk~Ll~~~~-~~~~~~l~~~~~~~~g~t~pLh~A~-----~~g~~~iv~~Ll~~g~~~~~~ 171 (357)
+..|.||||+|+..|+.+++++|++.++ + .+..+..|.| |||+|+ ..++.+++++|++.|....
T Consensus 108 d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~-------~~~~~~~g~t-pL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~-- 177 (276)
T 4hbd_A 108 DSNGNTALHYSVSHANFPVVQQLLDSGVCK-------VDKQNRAGYS-PIMLTALATLKTQDDIETVLQLFRLGNINA-- 177 (276)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHTSCCC-------TTCCCTTSCC-HHHHGGGCCCCSHHHHHHHHHHHHHSCTTC--
T ss_pred CCCCCCHHHHHHHCCCHHHHHHHHHCCCCc-------CCCCCCCCCC-HHHHHHHHHhhhhhhHHHHHHHHHcCCCcc--
Confidence 4459999999999999999999999998 5 6678999999 999999 6789999999999997765
Q ss_pred CCCccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCcccccc
Q 039985 172 PNHKKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASR 251 (357)
Q Consensus 172 ~~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~ 251 (357)
..+..|+||||+||..|+.++|++|+++|++++ .+|..|+||||+|+..|+.+++++|++. .+++++.
T Consensus 178 -----~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n---~~d~~G~TpLh~A~~~g~~~iv~~Ll~~----~gad~~~ 245 (276)
T 4hbd_A 178 -----KASQAGQTALMLAVSHGRVDVVKALLACEADVN---VQDDDGSTALMCACEHGHKEIAGLLLAV----PSCDISL 245 (276)
T ss_dssp -----CCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT---CCCTTSCCHHHHHHHHTCHHHHHHHHTS----TTCCTTC
T ss_pred -----ccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCC---CCCCCCCCHHHHHHHCCCHHHHHHHHhc----CCCCCcC
Confidence 455569999999999999999999999999998 9999999999999999999999999874 5789999
Q ss_pred ccCCCCcHHHHHHHcCCC
Q 039985 252 IDKKGYTLLHHVADMKHY 269 (357)
Q Consensus 252 ~d~~G~TpLh~Aa~~g~~ 269 (357)
+|.+|+||||+|+..|+.
T Consensus 246 ~d~~g~TpL~~A~~~g~~ 263 (276)
T 4hbd_A 246 TDRDGSTALMVALDAGQS 263 (276)
T ss_dssp CCTTSCCHHHHHHHHTCH
T ss_pred cCCCCCCHHHHHHHcCCH
Confidence 999999999999999973
|
| >3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.6e-29 Score=228.94 Aligned_cols=197 Identities=10% Similarity=0.039 Sum_probs=152.0
Q ss_pred CCCCCHHHHHHhcCCHHHHHHHHh----cCcchhHHHhhhhh----cCCCCCcHHHHHHH---hcCcHHHHHHHHHcCCC
Q 039985 99 PANISTISLGLGKGNMLKAKKLVD----FSAGELDELLLKKD----CTNKGNMIKAKKFV---DFSAAELVELFVKKDCT 167 (357)
Q Consensus 99 ~~g~t~Lh~A~~~g~~~~vk~Ll~----~~~~~~~~~l~~~~----~~~~g~t~pLh~A~---~~g~~~iv~~Ll~~g~~ 167 (357)
.+|+|+||.|++.|+.+.++.|++ .+.. .+. .+..|.| |||+|+ ..|+.++|++|++.|++
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~-------~~~~~~~~~~~g~t-~L~~A~~~~~~g~~~~v~~Ll~~g~~ 74 (260)
T 3jxi_A 3 VFNRPILFDIVSRGSPDGLEGLLSFLLTHKKR-------LTDEEFREPSTGKT-CLPKALLNLSAGRNDTIPILLDIAEK 74 (260)
T ss_dssp CCCHHHHHHHHHHTCGGGGTTHHHHHHHHTCC-------TTSGGGSCTTTCCC-HHHHHHTSCBTTBCTHHHHHHHHHHH
T ss_pred cchHHHHHHHHHhCCHHHHHHHHHHHHhcCCC-------cchhhhhccCCCCc-HHHHHHHHhhcCCHHHHHHHHHhccc
Confidence 458899999999999996665555 7766 232 3478999 999999 77999999999999875
Q ss_pred CCCC----CCCccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccC--------------CCCChHHHHHHHcC
Q 039985 168 IKGV----PNHKKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLN--------------EKEQNILHVAVKRR 229 (357)
Q Consensus 168 ~~~~----~~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d--------------~~G~TpLh~A~~~g 229 (357)
.... ....+.+|..|+||||+||..|+.++|++|+++|++++ .+| ..|+||||+|+..|
T Consensus 75 ~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~---~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g 151 (260)
T 3jxi_A 75 TGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVH---AQARGRFFQPKDEGGYFYFGELPLSLAACTN 151 (260)
T ss_dssp TTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTT---CCCEECCCSSSCCCCSCCSCSSHHHHHHHTT
T ss_pred ccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcC---ccccccccCcccccccccCCCCHHHHHHHcC
Confidence 3321 11112555679999999999999999999999999998 777 68999999999999
Q ss_pred CHHHHHHHHhhhccCCccccccccCCCCcHHHHHHHcCCCCCCCCCCChhHHHHHhhhHHHHHHhccC-ccc-------c
Q 039985 230 QYKVFELITKEMQLSVPKWASRIDKKGYTLLHHVADMKHYKEGTRPGPVLQFQEELQLFEHVKEIMPR-HYA-------M 301 (357)
Q Consensus 230 ~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~~~~~t~L~la~~l~~~~~v~~ll~~-~~~-------~ 301 (357)
+.+++++|++... .+++++.+|..|+||||+|+..|+.. .... ....+.++.++.. .+. +
T Consensus 152 ~~~~v~~Ll~~~~--~ga~~~~~d~~g~TpLh~A~~~~~~~--------~~~~--~~~~~~v~~Ll~~ga~~~~~~~~~~ 219 (260)
T 3jxi_A 152 QPHIVHYLTENGH--KQADLRRQDSRGNTVLHALVAIADNT--------RENT--KFVTKMYDLLLIKCAKLFPDTNLEA 219 (260)
T ss_dssp CHHHHHHHHHCSS--CCCCTTCCCTTSCCHHHHHHHHCCSS--------HHHH--HHHHHHHHHHHHHHHHHCTTCCGGG
T ss_pred CHHHHHHHHhccc--cCCCCcccCCCCCcHHHHHHHhccCc--------hhHH--HHHHHHHHHHHHhCcccccccchhh
Confidence 9999999987311 36799999999999999999988632 0000 0012344444432 244 6
Q ss_pred cccccCCCCHHHHHhhhh
Q 039985 302 HRDEKNKMTASDLFNLTH 319 (357)
Q Consensus 302 ~~n~~g~~Tp~dl~~~~~ 319 (357)
.+|.+|. ||+++|....
T Consensus 220 ~~d~~g~-tpL~~A~~~g 236 (260)
T 3jxi_A 220 LLNNDGL-SPLMMAAKTG 236 (260)
T ss_dssp CCCTTSC-CHHHHHHHTT
T ss_pred cccCCCC-CHHHHHHHcC
Confidence 7999999 9999997643
|
| >3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=2e-28 Score=217.73 Aligned_cols=172 Identities=12% Similarity=0.006 Sum_probs=91.6
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhh-hcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCC
Q 039985 101 NISTISLGLGKGNMLKAKKLVDFSAGELDELLLKK-DCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKN 179 (357)
Q Consensus 101 g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~-~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~ 179 (357)
|.||||+|+..|+.+++++|++.++. .. ..+..|.| |||+|+..|+.+++++|++.|++++ .++
T Consensus 42 g~t~L~~A~~~~~~~~v~~Ll~~~~~-------~~~~~~~~~~t-~L~~A~~~~~~~~v~~Ll~~g~~~~-------~~~ 106 (240)
T 3eu9_A 42 NVTLLHWAAINNRIDLVKYYISKGAI-------VDQLGGDLNST-PLHWATRQGHLSMVVQLMKYGADPS-------LID 106 (240)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCC-------TTCCBTTTTBC-HHHHHHHHTCHHHHHHHHHTTCCTT-------CCC
T ss_pred CCCHHHHHHHhCCHHHHHHHHHcCCc-------chhhcCCcCCC-hhHHHHHcCCHHHHHHHHHcCCCCc-------ccC
Confidence 44555555555555555555555554 22 22233555 5555555555555555555555544 333
Q ss_pred cCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCC-HHHHHHHHhhhccCCccccccccC-CCC
Q 039985 180 WAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQ-YKVFELITKEMQLSVPKWASRIDK-KGY 257 (357)
Q Consensus 180 ~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~-~~iv~~Ll~~~~~~~~~~~~~~d~-~G~ 257 (357)
..|.||||+|+..|+.+++++|+++|+++. .+|..|.||||+|+..++ .+++++|+. .+.+++..+. .|+
T Consensus 107 ~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~---~~~~~g~t~l~~a~~~~~~~~~~~~L~~-----~~~~~~~~~~~~g~ 178 (240)
T 3eu9_A 107 GEGCSCIHLAAQFGHTSIVAYLIAKGQDVD---MMDQNGMTPLMWAAYRTHSVDPTRLLLT-----FNVSVNLGDKYHKN 178 (240)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHTTCCTT---CCCTTSCCHHHHHHHHCCSSTTHHHHHH-----TTCCTTCCCTTTCC
T ss_pred CCCCCHHHHHHHcCHHHHHHHHHhcCCCcc---ccCCCCCcHHHHHHHhCChHHHHHHHHh-----cCCCcchhhccCCC
Confidence 345555555555555555555555555555 555555555555554444 455555544 4445555554 555
Q ss_pred cHHHHHHHcCCCCC--------------CCCCCChhHHHHHhhhHHHHHHhc
Q 039985 258 TLLHHVADMKHYKE--------------GTRPGPVLQFQEELQLFEHVKEIM 295 (357)
Q Consensus 258 TpLh~Aa~~g~~~~--------------~~~~~t~L~la~~l~~~~~v~~ll 295 (357)
||||+|+..|+.+. ...+.|||++|...+..+.++.++
T Consensus 179 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~ 230 (240)
T 3eu9_A 179 TALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQRKNVWMINHLQ 230 (240)
T ss_dssp CHHHHHHHHTCHHHHHHHHHHTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHH
T ss_pred cHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHH
Confidence 55555555555331 122235555555555555565555
|
| >3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A | Back alignment and structure |
|---|
Probab=99.96 E-value=1e-28 Score=211.61 Aligned_cols=148 Identities=18% Similarity=0.170 Sum_probs=134.2
Q ss_pred CCCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCC
Q 039985 99 PANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDK 178 (357)
Q Consensus 99 ~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~ 178 (357)
+.+.++||.|+..|+.++++.|++.+..+ .+..+..|.| |||+|+..|+.+++++|+++|++++ .+
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~------~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~g~~~~-------~~ 68 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTEND------LNQGDDHGFS-PLHWACREGRSAVVEMLIMRGARIN-------VM 68 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTTSC------TTCCCTTSCC-HHHHHHHTTCHHHHHHHHHTTCCTT-------CC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCccc------ccccCCCCCC-HHHHHHHcCcHHHHHHHHHcCCCCC-------Cc
Confidence 34789999999999999999999986542 5568899999 9999999999999999999999987 55
Q ss_pred CcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCc
Q 039985 179 NWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYT 258 (357)
Q Consensus 179 ~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~T 258 (357)
+..|.||||+|+..|+.+++++|+++|++++ .+|..|+||||+|+..|+.+++++|++ .+++++.+|..|.|
T Consensus 69 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---~~d~~g~t~L~~A~~~~~~~~v~~Ll~-----~ga~~~~~~~~g~t 140 (179)
T 3f6q_A 69 NRGDDTPLHLAASHGHRDIVQKLLQYKADIN---AVNEHGNVPLHYACFWGQDQVAEDLVA-----NGALVSICNKYGEM 140 (179)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT---CCCTTSCCHHHHHHHTTCHHHHHHHHH-----TTCCSSBCCTTSCC
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC---ccCCCCCCHHHHHHHcCCHHHHHHHHH-----CCCCcchhccCCCC
Confidence 6669999999999999999999999999998 999999999999999999999999998 68899999999999
Q ss_pred HHHHHHHcCC
Q 039985 259 LLHHVADMKH 268 (357)
Q Consensus 259 pLh~Aa~~g~ 268 (357)
|||+|+..++
T Consensus 141 pl~~A~~~~~ 150 (179)
T 3f6q_A 141 PVDKAKAPLR 150 (179)
T ss_dssp GGGGSCHHHH
T ss_pred cHHHHHHHHH
Confidence 9999998774
|
| >3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.9e-29 Score=211.02 Aligned_cols=147 Identities=16% Similarity=0.168 Sum_probs=134.5
Q ss_pred CCCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCC
Q 039985 99 PANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDK 178 (357)
Q Consensus 99 ~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~ 178 (357)
..|.|+||.|+..|+.++++.|++.+.. .....+..|.| |||+|+..|+.+++++|+++|++++ .+
T Consensus 6 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~------~~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~g~~~~-------~~ 71 (165)
T 3twr_A 6 SEADRQLLEAAKAGDVETVKKLCTVQSV------NCRDIEGRQST-PLHFAAGYNRVSVVEYLLQHGADVH-------AK 71 (165)
T ss_dssp CHHHHHHHHHHHHTCHHHHHHHCCTTTT------TCCCTTTTCCC-HHHHHHHTTCHHHHHHHHHTTCCTT-------CC
T ss_pred chhhHHHHHHHHhCCHHHHHHHHHcCCC------CccccccCCCC-HHHHHHHcChHHHHHHHHhcCCCCC-------cc
Confidence 4478999999999999999999986553 14567888999 9999999999999999999999987 56
Q ss_pred CcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCc
Q 039985 179 NWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYT 258 (357)
Q Consensus 179 ~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~T 258 (357)
|..|+||||+|+..|+.+++++|+++|++++ .+|..|+||||+|+..|+.+++++|++ .+++++.+|.+|.|
T Consensus 72 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---~~~~~g~t~L~~A~~~~~~~~v~~Ll~-----~ga~~~~~~~~g~t 143 (165)
T 3twr_A 72 DKGGLVPLHNACSYGHYEVAELLVKHGAVVN---VADLWKFTPLHEAAAKGKYEICKLLLQ-----HGADPTKKNRDGNT 143 (165)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT---CCCTTCCCHHHHHHHTTCHHHHHHHHH-----TTCCTTCCCTTSCC
T ss_pred CCCCCCHHHHHHHcCcHHHHHHHHhCCCCCC---CcCCCCCCHHHHHHHcCCHHHHHHHHH-----cCCCCcccCCCCCC
Confidence 6679999999999999999999999999998 999999999999999999999999998 68899999999999
Q ss_pred HHHHHHHcCC
Q 039985 259 LLHHVADMKH 268 (357)
Q Consensus 259 pLh~Aa~~g~ 268 (357)
|||+|+. |+
T Consensus 144 ~l~~a~~-~~ 152 (165)
T 3twr_A 144 PLDLVKD-GD 152 (165)
T ss_dssp TGGGSCT-TC
T ss_pred hhHhHhc-CC
Confidence 9999876 65
|
| >1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 | Back alignment and structure |
|---|
Probab=99.96 E-value=2.4e-29 Score=236.66 Aligned_cols=147 Identities=13% Similarity=0.067 Sum_probs=125.3
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCc---HHHHHHHHHcC-CCCCCCCCCcc
Q 039985 101 NISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSA---AELVELFVKKD-CTIKGVPNHKK 176 (357)
Q Consensus 101 g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~---~~iv~~Ll~~g-~~~~~~~~~~~ 176 (357)
|.||||+||..|+.++|++|++.+++ ++..|..|.| |||+|+..|+ .++++.|++.+ ++++
T Consensus 131 g~TpLh~Aa~~g~~~~v~~Ll~~Gad-------~n~~d~~g~T-pLh~A~~~g~~~~~~~~~~ll~~~~~~~~------- 195 (327)
T 1sw6_A 131 GNTPLHWLTSIANLELVKHLVKHGSN-------RLYGDNMGES-CLVKAVKSVNNYDSGTFEALLDYLYPCLI------- 195 (327)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCC-------TTBCCTTCCC-HHHHHHHSSHHHHTTCHHHHHHHHGGGGG-------
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCC-------CCCcCCCCCC-HHHHHHHhcccccHHHHHHHHHhhhcccc-------
Confidence 77999999999999999999999998 7889999999 9999999998 78888888886 4554
Q ss_pred CCCcCcchHHHHHHH----CCCHHHHHHHHhhCC--------------------Ccc----------------------c
Q 039985 177 DKNWAIRLTLLFAAS----NGITEILKEIIHQHP--------------------QAI----------------------L 210 (357)
Q Consensus 177 ~~~~~G~TpLh~Aa~----~G~~~iv~~Ll~~~~--------------------~~~----------------------~ 210 (357)
.+|..|+||||+|+. .|+.+++++|++.+. +++ .
T Consensus 196 ~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~~~ 275 (327)
T 1sw6_A 196 LEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANM 275 (327)
T ss_dssp EECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHHT
T ss_pred CCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHHHHHHHHhC
Confidence 566779999999999 999999999998743 211 0
Q ss_pred ccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcHHHHHHHcC
Q 039985 211 LDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTLLHHVADMK 267 (357)
Q Consensus 211 ~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g 267 (357)
++.+|..|+||||+|+..|+.++|++|++ .+++++.+|.+|+||||+|++.|
T Consensus 276 ~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~-----~Gad~~~~d~~G~TpL~~A~~~g 327 (327)
T 1sw6_A 276 LNAQDSNGDTCLNIAARLGNISIVDALLD-----YGADPFIANKSGLRPVDFGAGLE 327 (327)
T ss_dssp TTCCCTTSCCHHHHHHHHCCHHHHHHHHH-----TTCCTTCCCTTSCCGGGGTCC--
T ss_pred CCCCCCCCCCHHHHHHHcCCHHHHHHHHH-----cCCCCcccCCCCCCHHHHHHhcC
Confidence 13788899999999999999999999987 68889999999999999998765
|
| >3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-28 Score=223.12 Aligned_cols=162 Identities=15% Similarity=0.210 Sum_probs=133.3
Q ss_pred CCCCCHHHHHH---hcCCHHHHHHHHhcCcc--hhHHHhh--hhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCC
Q 039985 99 PANISTISLGL---GKGNMLKAKKLVDFSAG--ELDELLL--KKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGV 171 (357)
Q Consensus 99 ~~g~t~Lh~A~---~~g~~~~vk~Ll~~~~~--~~~~~l~--~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~ 171 (357)
..|.||||+|+ ..|+.+++++|++.++. ....++. ....|..|.| |||+|+..|+.++|++|+++|++++..
T Consensus 44 ~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t-~L~~A~~~g~~~~v~~Ll~~ga~~~~~ 122 (260)
T 3jxi_A 44 STGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQT-ALHIAIERRCKHYVELLVEKGADVHAQ 122 (260)
T ss_dssp TTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBC-HHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred CCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCCCC-HHHHHHHcCCHHHHHHHHhCCCCcCcc
Confidence 34999999999 78999999999998764 1111111 2234558999 999999999999999999999998733
Q ss_pred CCC-------ccCCCcCcchHHHHHHHCCCHHHHHHHHh---hCCCcccccccCCCCChHHHHHHHcCC---------HH
Q 039985 172 PNH-------KKDKNWAIRLTLLFAASNGITEILKEIIH---QHPQAILLDNLNEKEQNILHVAVKRRQ---------YK 232 (357)
Q Consensus 172 ~~~-------~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~---~~~~~~~~~~~d~~G~TpLh~A~~~g~---------~~ 232 (357)
... ....+..|.||||+||..|+.++|++|++ +|++++ .+|..|+||||+|+..++ .+
T Consensus 123 ~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~---~~d~~g~TpLh~A~~~~~~~~~~~~~~~~ 199 (260)
T 3jxi_A 123 ARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLR---RQDSRGNTVLHALVAIADNTRENTKFVTK 199 (260)
T ss_dssp CEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTT---CCCTTSCCHHHHHHHHCCSSHHHHHHHHH
T ss_pred ccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCc---ccCCCCCcHHHHHHHhccCchhHHHHHHH
Confidence 210 00111469999999999999999999999 899998 999999999999999888 79
Q ss_pred HHHHHHhhhccCCcccc-------ccccCCCCcHHHHHHHcCCC
Q 039985 233 VFELITKEMQLSVPKWA-------SRIDKKGYTLLHHVADMKHY 269 (357)
Q Consensus 233 iv~~Ll~~~~~~~~~~~-------~~~d~~G~TpLh~Aa~~g~~ 269 (357)
++++|++ .++++ +.+|..|+||||+|+..|+.
T Consensus 200 ~v~~Ll~-----~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~ 238 (260)
T 3jxi_A 200 MYDLLLI-----KCAKLFPDTNLEALLNNDGLSPLMMAAKTGKI 238 (260)
T ss_dssp HHHHHHH-----HHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCH
T ss_pred HHHHHHH-----hCcccccccchhhcccCCCCCHHHHHHHcCCH
Confidence 9999988 45666 78999999999999999973
|
| >2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=4.1e-28 Score=221.56 Aligned_cols=162 Identities=17% Similarity=0.189 Sum_probs=133.8
Q ss_pred CCCCCCHHHHHHhc---CCHHHHHHHHhcCcc--hhHHHhhh--hhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCC
Q 039985 98 SPANISTISLGLGK---GNMLKAKKLVDFSAG--ELDELLLK--KDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKG 170 (357)
Q Consensus 98 ~~~g~t~Lh~A~~~---g~~~~vk~Ll~~~~~--~~~~~l~~--~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~ 170 (357)
+..|.||||+|+.. |+.+++++|++.++. .+..++.. ...|..|.| |||+|+..|+.++|++|+++|++++.
T Consensus 51 ~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~t-pL~~A~~~g~~~~v~~Ll~~ga~~~~ 129 (273)
T 2pnn_A 51 PETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQT-ALHIAIERRNMTLVTLLVENGADVQA 129 (273)
T ss_dssp TTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCC-HHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred CcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcccccccCCCCC-HHHHHHHcCCHHHHHHHHHCCCCcCc
Confidence 34599999999987 999999999998765 11111111 225678999 99999999999999999999999873
Q ss_pred CCCC-------ccCCCcCcchHHHHHHHCCCHHHHHHHHh---hCCCcccccccCCCCChHHHHHHHcCC---------H
Q 039985 171 VPNH-------KKDKNWAIRLTLLFAASNGITEILKEIIH---QHPQAILLDNLNEKEQNILHVAVKRRQ---------Y 231 (357)
Q Consensus 171 ~~~~-------~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~---~~~~~~~~~~~d~~G~TpLh~A~~~g~---------~ 231 (357)
.... ....+..|.||||+|+..|+.++|++|++ +|++++ .+|..|+||||+|+..|+ .
T Consensus 130 ~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~---~~d~~g~tpLh~A~~~~~~~~~~~~~~~ 206 (273)
T 2pnn_A 130 AANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADIS---ARDSVGNTVLHALVEVADNTVDNTKFVT 206 (273)
T ss_dssp CBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTT---CCCTTSCCHHHHHHHHCCSCHHHHHHHH
T ss_pred cccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCce---eeCCCCCcHHHHHHHccCcchhHHHHHH
Confidence 3220 00112369999999999999999999999 899998 999999999999999998 7
Q ss_pred HHHHHHHhhhccCCccccc-------cccCCCCcHHHHHHHcCC
Q 039985 232 KVFELITKEMQLSVPKWAS-------RIDKKGYTLLHHVADMKH 268 (357)
Q Consensus 232 ~iv~~Ll~~~~~~~~~~~~-------~~d~~G~TpLh~Aa~~g~ 268 (357)
+++++|++ .+++++ .+|.+|+||||+|+..|+
T Consensus 207 ~~v~~Ll~-----~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~ 245 (273)
T 2pnn_A 207 SMYNEILI-----LGAKLHPTLKLEEITNRKGLTPLALAASSGK 245 (273)
T ss_dssp HHHHHHHH-----HHHHHCTTCCGGGCCCTTSCCHHHHHHHTTC
T ss_pred HHHHHHHH-----hhhhcccccccccccCCCCCCHHHHHHHhCh
Confidence 99999988 456665 599999999999999997
|
| >2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.3e-29 Score=226.81 Aligned_cols=145 Identities=8% Similarity=0.025 Sum_probs=132.4
Q ss_pred CCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCC
Q 039985 100 ANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKN 179 (357)
Q Consensus 100 ~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~ 179 (357)
.|.||||+|+..|+.+++++|++.+++ .+..|..|.| |||+|+..|+.++|++|+++|++++ .+|
T Consensus 20 ~~~t~L~~A~~~g~~~~v~~Ll~~g~~-------~~~~d~~g~t-pLh~A~~~g~~~~v~~Ll~~ga~~n-------~~d 84 (229)
T 2vge_A 20 NPLVLLLDAALTGELEVVQQAVKEMND-------PSQPNEEGIT-ALHNAICGANYSIVDFLITAGANVN-------SPD 84 (229)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHHSSC-------TTCCCTTSCC-HHHHHHHTTCHHHHHHHHHTTCCTT-------CCC
T ss_pred chhHHHHHHHHcCCHHHHHHHHhcCCC-------CCCCCCCCCC-HHHHHHHcCCHHHHHHHHHCCCCCC-------CCC
Confidence 377899999999999999999999988 7789999999 9999999999999999999999987 566
Q ss_pred cCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccC-CCCChHHHHH--HHcCCHHHHHHHHhhhccCCccccccccCCC
Q 039985 180 WAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLN-EKEQNILHVA--VKRRQYKVFELITKEMQLSVPKWASRIDKKG 256 (357)
Q Consensus 180 ~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d-~~G~TpLh~A--~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G 256 (357)
..|+||||+||..|+.+++++|+++|++++ .+| ..|+||||+| +..|+.+++++|++ .+++++.+|..|
T Consensus 85 ~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~---~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~-----~ga~~~~~~~~~ 156 (229)
T 2vge_A 85 SHGWTPLHCAASCNDTVICMALVQHGAAIF---ATTLSDGATAFEKCDPYREGYADCATYLAD-----VEQSMGLMNSGA 156 (229)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHTTTCCTT---CCCSSTTCCTGGGCCTTSTTHHHHHHHHHH-----HHHHTTTSGGGE
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCcc---cccCCCCCCHHHHHHHHhcChHHHHHHHHH-----cCCCcccccCCc
Confidence 679999999999999999999999999998 665 7999999999 99999999999998 567888888889
Q ss_pred CcHHHHHHHcC
Q 039985 257 YTLLHHVADMK 267 (357)
Q Consensus 257 ~TpLh~Aa~~g 267 (357)
.||||.++...
T Consensus 157 ~~~l~~~~~~~ 167 (229)
T 2vge_A 157 VYALWDYSAEF 167 (229)
T ss_dssp EEESSCBCCSS
T ss_pred hHHHHHHhhcc
Confidence 99988665544
|
| >4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=3.3e-28 Score=223.41 Aligned_cols=178 Identities=13% Similarity=0.086 Sum_probs=156.9
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCC-CCCCCCCCccCCC
Q 039985 101 NISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDC-TIKGVPNHKKDKN 179 (357)
Q Consensus 101 g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~-~~~~~~~~~~~~~ 179 (357)
+.+++|.|+..|+.+.++.+++...+ ...+..|.+|.| |||+|+..|+.++|++|++.|+ +++ .+|
T Consensus 76 ~~~~l~~a~~~~~~~~~~~l~~~~~~-----~~~n~~d~~g~T-~Lh~A~~~g~~~~v~~Ll~~g~~~~~-------~~~ 142 (276)
T 4hbd_A 76 CRSDAHPELVRRHLVTFRAMSARLLD-----YVVNIADSNGNT-ALHYSVSHANFPVVQQLLDSGVCKVD-------KQN 142 (276)
T ss_dssp HSTTCCHHHHHHHHHHHHHHCHHHHH-----HHHTCCCTTSCC-HHHHHHHTTCHHHHHHHHHTSCCCTT-------CCC
T ss_pred hccCCCHHHHHHHHHHHHHHHHHHHh-----hcCcCCCCCCCC-HHHHHHHCCCHHHHHHHHHCCCCcCC-------CCC
Confidence 46788999999999999999887655 236678999999 9999999999999999999998 665 556
Q ss_pred cCcchHHHHHH-----HCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccC
Q 039985 180 WAIRLTLLFAA-----SNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDK 254 (357)
Q Consensus 180 ~~G~TpLh~Aa-----~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~ 254 (357)
..|.||||+|+ ..|+.+++++|++.|.+.. ..|..|+||||+|+..|+.++|++|++ .++++|.+|.
T Consensus 143 ~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~---~~~~~g~tpLh~A~~~g~~~~v~~Ll~-----~gad~n~~d~ 214 (276)
T 4hbd_A 143 RAGYSPIMLTALATLKTQDDIETVLQLFRLGNINA---KASQAGQTALMLAVSHGRVDVVKALLA-----CEADVNVQDD 214 (276)
T ss_dssp TTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTC---CCTTTCCCHHHHHHHTTCHHHHHHHHH-----TTCCTTCCCT
T ss_pred CCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCcc---ccCCCCCCHHHHHHHcCCHHHHHHHHh-----CCCCCCCCCC
Confidence 66999999999 6799999999999998887 889999999999999999999999998 6889999999
Q ss_pred CCCcHHHHHHHcCCCCCCCCCCChhHHHHHhhhHHHHHHhcc--CcccccccccCCCCHHHHHhhhh
Q 039985 255 KGYTLLHHVADMKHYKEGTRPGPVLQFQEELQLFEHVKEIMP--RHYAMHRDEKNKMTASDLFNLTH 319 (357)
Q Consensus 255 ~G~TpLh~Aa~~g~~~~~~~~~t~L~la~~l~~~~~v~~ll~--~~~~~~~n~~g~~Tp~dl~~~~~ 319 (357)
+|+||||+|+..|+. +.++.++. +.+.+.+|.+|. ||+++|....
T Consensus 215 ~G~TpLh~A~~~g~~-------------------~iv~~Ll~~~gad~~~~d~~g~-TpL~~A~~~g 261 (276)
T 4hbd_A 215 DGSTALMCACEHGHK-------------------EIAGLLLAVPSCDISLTDRDGS-TALMVALDAG 261 (276)
T ss_dssp TSCCHHHHHHHHTCH-------------------HHHHHHHTSTTCCTTCCCTTSC-CHHHHHHHHT
T ss_pred CCCCHHHHHHHCCCH-------------------HHHHHHHhcCCCCCcCcCCCCC-CHHHHHHHcC
Confidence 999999999999973 45666665 457889999999 9999997643
|
| >3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.8e-27 Score=202.11 Aligned_cols=136 Identities=12% Similarity=0.117 Sum_probs=121.7
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCc
Q 039985 101 NISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNW 180 (357)
Q Consensus 101 g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~ 180 (357)
|.||||+|+..|+.+++++|++.+++ .+..+..|.| |||+|+..|+.+++++|+++|++++ .+|.
T Consensus 36 g~t~L~~A~~~~~~~~v~~Ll~~g~~-------~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~g~~~~-------~~~~ 100 (172)
T 3v30_A 36 GFTPLIWASAFGEIETVRFLLEWGAD-------PHILAKERES-ALSLASTGGYTDIVGLLLERDVDIN-------IYDW 100 (172)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHHTCC-------TTCCCTTCCC-HHHHHHHTTCHHHHHHHHTTTCCTT-------CCCT
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCC-------chhhcccCCC-HHHHHHHCCCHHHHHHHHHcCCCCC-------CCCC
Confidence 78999999999999999999999998 7788999999 9999999999999999999999987 5666
Q ss_pred CcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcH
Q 039985 181 AIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTL 259 (357)
Q Consensus 181 ~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~Tp 259 (357)
.|.||||+|+..|+.+++++|+++|+++. .+|..|+||||+|+..|+.+++++|++ .+..+..++..|.||
T Consensus 101 ~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~---~~~~~g~t~l~~A~~~~~~~~~~~L~~-----~~~~~~~~~~~~~~p 171 (172)
T 3v30_A 101 NGGTPLLYAVRGNHVKCVEALLARGADLT---TEADSGYTPMDLAVALGYRKVQQVIEN-----HILKLFQSNLVPADP 171 (172)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTCCTT---CCCTTSCCHHHHHHHHTCHHHHHHHHH-----HHHHHSCC-------
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCcc---ccCCCCCCHHHHHHHhCcHHHHHHHHH-----HHHHHhcccCCCCCC
Confidence 79999999999999999999999999998 999999999999999999999999998 566788888888887
|
| >1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A | Back alignment and structure |
|---|
Probab=99.95 E-value=2.9e-28 Score=204.27 Aligned_cols=142 Identities=10% Similarity=0.051 Sum_probs=116.4
Q ss_pred CCCCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccC
Q 039985 98 SPANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKD 177 (357)
Q Consensus 98 ~~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~ 177 (357)
...|.||||+|+..|+.+++++|++.+.+ .+..|..|.| |||+|+ .|+.+++++|+++|++++ .
T Consensus 9 ~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~-------~~~~~~~g~t-~L~~A~-~~~~~~v~~Ll~~g~~~~-------~ 72 (156)
T 1bi7_B 9 MEPSADWLATAAARGRVEEVRALLEAGAN-------PNAPNSYGRR-PIQVMM-MGSARVAELLLLHGAEPN-------C 72 (156)
T ss_dssp -CCSTTHHHHHHHHTCHHHHHHHHTTTCC-------TTCCCSSSCC-TTTSSC-TTCHHHHHHHHTTTCCCC-------C
T ss_pred CccchHHHHHHHHcCCHHHHHHHHHcCCC-------CCCCCCCCCC-HHHHHH-cCCHHHHHHHHHcCCCCC-------C
Confidence 34589999999999999999999999988 7788999999 999995 899999999999999987 5
Q ss_pred CCcCcch-HHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCC
Q 039985 178 KNWAIRL-TLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKG 256 (357)
Q Consensus 178 ~~~~G~T-pLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G 256 (357)
+|..|.| |||+|+..|+.+++++|+++|++++ .+|..|+||||+|+..|+.+++++|++ .+++++.+|..|
T Consensus 73 ~d~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~~---~~d~~g~tpl~~A~~~~~~~~v~~Ll~-----~ga~~~~~~~~g 144 (156)
T 1bi7_B 73 ADPATLTRPVHDAAREGFLDTLVVLHRAGARLD---VRDAWGRLPVDLAEELGHRDVARYLRA-----AAGGTRGSNHAR 144 (156)
T ss_dssp CCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCSS---CCCTTCCCHHHHHHHHTCHHHHHHHSS-----CC----------
T ss_pred cCCCCCcHHHHHHHHCCCHHHHHHHHHcCCCCc---ccCCCCCCHHHHHHHhCHHHHHHHHHH-----cCCCCCccCcCc
Confidence 6667999 9999999999999999999999998 999999999999999999999999977 789999999999
Q ss_pred CcHHHHH
Q 039985 257 YTLLHHV 263 (357)
Q Consensus 257 ~TpLh~A 263 (357)
.||.+-+
T Consensus 145 ~t~~~~~ 151 (156)
T 1bi7_B 145 IDAAEGP 151 (156)
T ss_dssp -------
T ss_pred CcccccC
Confidence 9998744
|
| >1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B | Back alignment and structure |
|---|
Probab=99.95 E-value=3.9e-28 Score=218.05 Aligned_cols=147 Identities=12% Similarity=-0.031 Sum_probs=105.8
Q ss_pred CCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCC
Q 039985 100 ANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKN 179 (357)
Q Consensus 100 ~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~ 179 (357)
.|.||||.|++.|+.++++.|++.+.+ .+ .+..|.| |||+|+..|+.++|++|++.|++++ .+|
T Consensus 4 ~g~t~L~~a~~~~~~~~~~~ll~~g~~-------~~-~~~~~~t-~L~~A~~~g~~~~v~~Ll~~g~~~~-------~~d 67 (239)
T 1ycs_B 4 TGQVSLPPGKRTNLRKTGSERIAHGMR-------VK-FNPLPLA-LLLDSSLEGEFDLVQRIIYEVDDPS-------LPN 67 (239)
T ss_dssp -----------------------------------------CHH-HHHHHHHHTCHHHHHHHTSTTSSCC-------CCC
T ss_pred cccccCchhhhhhhHHHHHHHhccCCC-------cc-cCchhhH-HHHHHHHcCCHHHHHHHHHcCCCCC-------CcC
Confidence 389999999999999999999999987 32 3467888 9999999999999999999999887 566
Q ss_pred cCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCC-c
Q 039985 180 WAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGY-T 258 (357)
Q Consensus 180 ~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~-T 258 (357)
..|.||||+||..|+.++|++|+++|++++ .+|..|+||||+|+..|+.+++++|++ .+++++.+|..|. |
T Consensus 68 ~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~---~~d~~g~tpL~~A~~~~~~~~v~~Ll~-----~ga~~~~~~~~~~~t 139 (239)
T 1ycs_B 68 DEGITALHNAVCAGHTEIVKFLVQFGVNVN---AADSDGWTPLHCAASCNNVQVCKFLVE-----SGAAVFAMTYSDMQT 139 (239)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHHHHHTCCTT---CCCTTCCCHHHHHHHTTCHHHHHHHHH-----TTCCTTCCCSSSCCC
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCC---ccCCCCCCHHHHHHHcCCHHHHHHHHH-----cCCCcceecCCCCcc
Confidence 679999999999999999999999999998 999999999999999999999999998 6889999998887 9
Q ss_pred HHHHH--HHcCCCC
Q 039985 259 LLHHV--ADMKHYK 270 (357)
Q Consensus 259 pLh~A--a~~g~~~ 270 (357)
|||+| +..|+.+
T Consensus 140 ~l~~a~~~~~g~~~ 153 (239)
T 1ycs_B 140 AADKCEEMEEGYTQ 153 (239)
T ss_dssp HHHHCCSSSTTCCC
T ss_pred hHHHHHHhhhccHH
Confidence 99999 6667644
|
| >2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.1e-26 Score=200.93 Aligned_cols=150 Identities=12% Similarity=0.045 Sum_probs=134.4
Q ss_pred hhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccc
Q 039985 134 KKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDN 213 (357)
Q Consensus 134 ~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~ 213 (357)
.+..|..|.| |||+|+..|+.+++++|+++|++++ .++..|.||||+|+..|+.+++++|+++|+++. .
T Consensus 28 ~n~~d~~g~t-~L~~A~~~g~~~~v~~Ll~~~~~~~-------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---~ 96 (192)
T 2rfm_A 28 RNYRDSYNRT-PLMVACMLGMENAIDKLVENFDKLE-------DKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVN---T 96 (192)
T ss_dssp HTCCCTTCCC-HHHHHHHHTCGGGHHHHHHHHCCTT-------CCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTT---C
T ss_pred HhCcCCCCCC-HHHHHHHcCCHHHHHHHHHhccccc-------cccccCccHHHHHHHcCCHHHHHHHHHCCCCCC---C
Confidence 4568999999 9999999999999999999999877 556669999999999999999999999999998 9
Q ss_pred cCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcHHHHHHHcCCCCCCCCCCChhHHHHHhhhHHHHHH
Q 039985 214 LNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTLLHHVADMKHYKEGTRPGPVLQFQEELQLFEHVKE 293 (357)
Q Consensus 214 ~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~~~~~t~L~la~~l~~~~~v~~ 293 (357)
+|..|+||||+|+..|+.+++++|++ .+.+++.+|..|.||||+|+..|+. +.++.
T Consensus 97 ~~~~g~t~L~~A~~~~~~~~v~~Ll~-----~g~~~~~~~~~g~t~L~~A~~~~~~-------------------~~v~~ 152 (192)
T 2rfm_A 97 KDFSGKTPLMWSIIFGYSEMSYFLLE-----HGANVNDRNLEGETPLIVASKYGRS-------------------EIVKK 152 (192)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHHHH-----TTCCSSCCCTTCCCHHHHHHHHTCH-------------------HHHHH
T ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHH-----CCCCCCCCCCCCCCHHHHHHHcCCH-------------------HHHHH
Confidence 99999999999999999999999998 6889999999999999999999973 34555
Q ss_pred hcc-CcccccccccCCCCHHHHHhhhh
Q 039985 294 IMP-RHYAMHRDEKNKMTASDLFNLTH 319 (357)
Q Consensus 294 ll~-~~~~~~~n~~g~~Tp~dl~~~~~ 319 (357)
++. ..+.+.+|..|. ||+++|....
T Consensus 153 Ll~~ga~~~~~~~~g~-t~l~~A~~~~ 178 (192)
T 2rfm_A 153 LLELGADISARDLTGL-TAEASARIFG 178 (192)
T ss_dssp HHHTTCCTTCBCTTSC-BHHHHHHHTT
T ss_pred HHHCCCCCCCcCCCCC-CHHHHHHHhC
Confidence 553 457888999999 9999997543
|
| >1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 | Back alignment and structure |
|---|
Probab=99.94 E-value=2.9e-26 Score=191.23 Aligned_cols=119 Identities=13% Similarity=0.188 Sum_probs=113.4
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCc
Q 039985 101 NISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNW 180 (357)
Q Consensus 101 g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~ 180 (357)
|.||||+|+..|+.+++++|++.+.+ .+..+..|.| |||+|+..|+.+++++|+++|++++ .+|.
T Consensus 34 g~t~L~~A~~~~~~~~v~~Ll~~g~~-------~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~g~~~~-------~~~~ 98 (153)
T 1awc_B 34 GTSPLHLAAQYGHFSTTEVLLRAGVS-------RDARTKVDRT-PLHMAASEGHANIVEVLLKHGADVN-------AKDM 98 (153)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHTTTCC-------TTCCCTTCCC-HHHHHHHHTCHHHHHHHHTTTCCTT-------CCCT
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCC-------CCCCCCCCCC-HHHHHHHcChHHHHHHHHHcCCCCC-------CCCC
Confidence 77999999999999999999999988 7788999999 9999999999999999999999987 5666
Q ss_pred CcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHH
Q 039985 181 AIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELI 237 (357)
Q Consensus 181 ~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~L 237 (357)
.|.||||+|+..|+.+++++|+++|+++. .+|..|+||||+|+.+|+.+++++|
T Consensus 99 ~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~---~~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 99 LKMTALHWATEHNHQEVVELLIKYGADVH---TQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTCCTT---CCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCcc---ccCCCCCCHHHHHHHcCCHHHHHHh
Confidence 79999999999999999999999999998 9999999999999999999999987
|
| >3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A | Back alignment and structure |
|---|
Probab=99.94 E-value=5.2e-26 Score=192.17 Aligned_cols=151 Identities=11% Similarity=0.112 Sum_probs=131.5
Q ss_pred CCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCC
Q 039985 140 KGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQ 219 (357)
Q Consensus 140 ~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~ 219 (357)
.|.| |||.|+..|+.+++++|++.+++++ .+|..|.||||+|+..|+.+++++|+++|+++. .+|..|+
T Consensus 2 ~~~t-~L~~A~~~g~~~~v~~ll~~~~~~~-------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---~~~~~g~ 70 (167)
T 3v31_A 2 ANSL-SVHQLAAQGEMLYLATRIEQENVIN-------HTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQ---LLGKGRE 70 (167)
T ss_dssp TTCC-CHHHHHHTTCHHHHHHHHHHSSCTT-------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT---CCCTTCC
T ss_pred CCcc-hHHHHHHCCCHHHHHHHHHcCCCcC-------CCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCC---CcCCCCC
Confidence 5788 9999999999999999999998876 566679999999999999999999999999998 8999999
Q ss_pred hHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcHHHHHHHcCCCCCCCCCCChhHHHHHhhhHHHHHHhcc-Cc
Q 039985 220 NILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTLLHHVADMKHYKEGTRPGPVLQFQEELQLFEHVKEIMP-RH 298 (357)
Q Consensus 220 TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~~~~~t~L~la~~l~~~~~v~~ll~-~~ 298 (357)
||||+|+..|+.+++++|++ .+.+++.+|..|+||||+|+..|+. +.++.++. +.
T Consensus 71 t~L~~A~~~~~~~~v~~Ll~-----~g~~~~~~~~~g~t~L~~A~~~~~~-------------------~~v~~Ll~~g~ 126 (167)
T 3v31_A 71 SALSLACSKGYTDIVKMLLD-----CGVDVNEYDWNGGTPLLYAVHGNHV-------------------KCVKMLLESGA 126 (167)
T ss_dssp CHHHHHHHHTCHHHHHHHHH-----HTCCTTCCCTTSCCHHHHHHHTTCH-------------------HHHHHHHHTTC
T ss_pred cHHHHHHHcCCHHHHHHHHH-----CCCCCCcCCCCCCCHHHHHHHcCCH-------------------HHHHHHHHcCC
Confidence 99999999999999999998 5789999999999999999999973 34555553 45
Q ss_pred ccccccccCCCCHHHHHhhh-hHHHHHHH
Q 039985 299 YAMHRDEKNKMTASDLFNLT-HEDQLRKA 326 (357)
Q Consensus 299 ~~~~~n~~g~~Tp~dl~~~~-~~~~~~~~ 326 (357)
+.+.+|.+|. ||+++|... +.+.++..
T Consensus 127 ~~~~~~~~g~-t~l~~A~~~~~~~~~~~L 154 (167)
T 3v31_A 127 DPTIETDSGY-NSMDLAVALGYRSVQQVI 154 (167)
T ss_dssp CTTCCCTTSC-CHHHHHHHHTCHHHHHHH
T ss_pred CCCCcCCCCC-CHHHHHHHcCcHHHHHHH
Confidence 7788999999 999999754 34444433
|
| >1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 | Back alignment and structure |
|---|
Probab=99.94 E-value=8.6e-27 Score=190.76 Aligned_cols=127 Identities=10% Similarity=0.101 Sum_probs=118.5
Q ss_pred CCCCCCCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCC
Q 039985 95 STTSPANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNH 174 (357)
Q Consensus 95 ~~~~~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~ 174 (357)
+..+..|.||||+|+..|+.+++++|++.+.+ .+..|..|.| |||+|+. |+.+++++|+++|++++
T Consensus 6 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-------~~~~~~~g~t-~L~~A~~-~~~~~v~~Ll~~g~~~~----- 71 (136)
T 1d9s_A 6 HMLGGSSDAGLATAAARGQVETVRQLLEAGAD-------PNALNRFGRR-PIQVMMM-GSAQVAELLLLHGAEPN----- 71 (136)
T ss_dssp SCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCC-------TTCCCTTCCT-TTTTSTT-SCHHHHHHHHHHTCCSS-----
T ss_pred cCCCCCCccHHHHHHHcCCHHHHHHHHHcCCC-------cCCcCCCCCC-HHHHHHc-CCHHHHHHHHHCCCCCC-----
Confidence 33455699999999999999999999999988 7788999999 9999999 99999999999999987
Q ss_pred ccCCCcC-cchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhh
Q 039985 175 KKDKNWA-IRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKE 240 (357)
Q Consensus 175 ~~~~~~~-G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~ 240 (357)
.+|.. |.||||+|+..|+.+++++|+++|+++. .+|..|+||||+|+..|+.+++++|++.
T Consensus 72 --~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~---~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ 133 (136)
T 1d9s_A 72 --CADPATLTRPVHDAAREGFLDTLVVLHRAGARLD---VCDAWGRLPVDLAEEQGHRDIARYLHAA 133 (136)
T ss_dssp --CCBTTTTBCHHHHHHHHTCHHHHHHHHHTCCCCC---CCSSSSSCHHHHHHHHTCHHHHHHHHHH
T ss_pred --CcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC---ccCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 66777 8999999999999999999999999998 9999999999999999999999999874
|
| >2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* | Back alignment and structure |
|---|
Probab=99.94 E-value=5.5e-26 Score=192.80 Aligned_cols=121 Identities=15% Similarity=0.215 Sum_probs=115.0
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCc
Q 039985 101 NISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNW 180 (357)
Q Consensus 101 g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~ 180 (357)
|.||||+|+..|+.+++++|++.+.+ .+..|..|.| |||+|+..|+.+++++|+++|++++ .+|.
T Consensus 47 g~t~L~~A~~~~~~~~v~~Ll~~g~~-------~~~~~~~g~t-~L~~A~~~~~~~~~~~Ll~~g~~~~-------~~~~ 111 (169)
T 2y1l_E 47 GWTPLHLAAFNGHLEIVEVLLKNGAD-------VNAVDHAGMT-PLRLAALFGHLEIVEVLLKNGADVN-------ANDM 111 (169)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCC-------TTCCCTTSCC-HHHHHHHTTCHHHHHHHHHTTCCTT-------CCCT
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCC-------CCccCCCCCC-HHHHHHHcCCHHHHHHHHHcCCCCC-------CCCC
Confidence 77999999999999999999999988 7778999999 9999999999999999999999987 5666
Q ss_pred CcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHh
Q 039985 181 AIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITK 239 (357)
Q Consensus 181 ~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~ 239 (357)
.|.||||+|+..|+.+++++|+++|+++. .+|..|+||||+|+..|+.+++++|++
T Consensus 112 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---~~~~~g~t~l~~A~~~~~~~~~~~L~~ 167 (169)
T 2y1l_E 112 EGHTPLHLAAMFGHLEIVEVLLKNGADVN---AQDKFGKTAFDISIDNGNEDLAEILQK 167 (169)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTCCTT---CCCTTSCCHHHHHHHTTCHHHHHHHHT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCC---CcCCCCCCHHHHHHHhCCHHHHHHHHH
Confidence 79999999999999999999999999998 999999999999999999999999976
|
| >1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A | Back alignment and structure |
|---|
Probab=99.94 E-value=3e-26 Score=192.32 Aligned_cols=122 Identities=13% Similarity=0.117 Sum_probs=114.4
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCc
Q 039985 101 NISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNW 180 (357)
Q Consensus 101 g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~ 180 (357)
|.||||+|+. |+.+++++|++.+.+ .+..+..|.| |||+|+..|+.+++++|+++|++++ .+|.
T Consensus 38 g~t~L~~A~~-~~~~~v~~Ll~~g~~-------~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~g~~~~-------~~~~ 101 (162)
T 1ihb_A 38 GRTALQVMKL-GNPEIARRLLLRGAN-------PDLKDRTGFA-VIHDAARAGFLDTLQTLLEFQADVN-------IEDN 101 (162)
T ss_dssp SCCHHHHCCS-SCHHHHHHHHHTTCC-------TTCCCTTSCC-HHHHHHHHTCHHHHHHHHHTTCCTT-------CCCT
T ss_pred CccHHHHHHc-CcHHHHHHHHHcCCC-------CCCCCCCCCC-HHHHHHHcCCHHHHHHHHHcCCCCC-------CcCC
Confidence 7899999999 999999999999988 7788999999 9999999999999999999999987 5666
Q ss_pred CcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhh
Q 039985 181 AIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKE 240 (357)
Q Consensus 181 ~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~ 240 (357)
.|.||||+|++.|+.+++++|+++|++.. +.+|..|+||||+|+..|+.+++++|++.
T Consensus 102 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~--~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~ 159 (162)
T 1ihb_A 102 EGNLPLHLAAKEGHLRVVEFLVKHTASNV--GHRNHKGDTACDLARLYGRNEVVSLMQAN 159 (162)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHHSCCCT--TCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHccCCCC--CCcCCCCCcHHHHHHHcCCHHHHHHHHHh
Confidence 79999999999999999999999999964 49999999999999999999999999883
|
| >3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.9e-27 Score=206.01 Aligned_cols=146 Identities=14% Similarity=0.062 Sum_probs=128.5
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcH----HHHHHHHHcCCCCCCCCCCcc
Q 039985 101 NISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAA----ELVELFVKKDCTIKGVPNHKK 176 (357)
Q Consensus 101 g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~----~iv~~Ll~~g~~~~~~~~~~~ 176 (357)
++++||.|++.|+.+.++.++..+.... .+..|.| |||+|+..|+. +++++||++|++++
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~~~~~--------~~~~g~T-~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn------- 69 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKGYEDK--------ESVLKSN-ILYDVLRNNNDEARYKISMFLINKGADIK------- 69 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHSSSCH--------HHHHTTT-HHHHHTTCSCHHHHHHHHHHHHHTTCCSS-------
T ss_pred cccHHHHHHHcCCHHHHHHHHhcCcccc--------cccCCCC-HHHHHHHcCCcchHHHHHHHHHHCCCCCC-------
Confidence 5689999999999999999998776511 1257999 99999999975 59999999999998
Q ss_pred CCCcCcchHHHHHHHCCC------HHHHHHHHhhCCCcccccccCCCCC-hHHHHHHHcCC-----HHHHHHHHhhhccC
Q 039985 177 DKNWAIRLTLLFAASNGI------TEILKEIIHQHPQAILLDNLNEKEQ-NILHVAVKRRQ-----YKVFELITKEMQLS 244 (357)
Q Consensus 177 ~~~~~G~TpLh~Aa~~G~------~~iv~~Ll~~~~~~~~~~~~d~~G~-TpLh~A~~~g~-----~~iv~~Ll~~~~~~ 244 (357)
.+|..|+||||+|+..|+ .+++++|+++|++++ .+|..|+ ||||+|+..+. .+++++|+..
T Consensus 70 ~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin---~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~---- 142 (186)
T 3t8k_A 70 SRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADIT---ALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQ---- 142 (186)
T ss_dssp CCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSS---SCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTS----
T ss_pred CCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCC---ccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHh----
Confidence 666779999999999997 688999999999999 9999999 99999999554 5699999873
Q ss_pred CccccccccCCCCcHHHHHHHcCCC
Q 039985 245 VPKWASRIDKKGYTLLHHVADMKHY 269 (357)
Q Consensus 245 ~~~~~~~~d~~G~TpLh~Aa~~g~~ 269 (357)
.+++++.+|..|.||||+|++.|+.
T Consensus 143 ~gad~~~~d~~G~TpL~~A~~~~~~ 167 (186)
T 3t8k_A 143 SGLQLLIKDKWGLTALEFVKRCQKP 167 (186)
T ss_dssp TTCCTTCCCTTSCCHHHHHHTTTCH
T ss_pred cCCCCcccCCCCCCHHHHHHHcCCH
Confidence 5789999999999999999999973
|
| >1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B | Back alignment and structure |
|---|
Probab=99.94 E-value=3.2e-27 Score=212.06 Aligned_cols=146 Identities=8% Similarity=-0.007 Sum_probs=130.9
Q ss_pred CCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCC
Q 039985 100 ANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKN 179 (357)
Q Consensus 100 ~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~ 179 (357)
.|.||||.|+..|+.++++.|++.+++ .+..|..|.| |||+|+..|+.++|++|+++|++++ .+|
T Consensus 36 ~~~t~L~~A~~~g~~~~v~~Ll~~g~~-------~~~~d~~g~t-~L~~A~~~g~~~~v~~Ll~~ga~~~-------~~d 100 (239)
T 1ycs_B 36 LPLALLLDSSLEGEFDLVQRIIYEVDD-------PSLPNDEGIT-ALHNAVCAGHTEIVKFLVQFGVNVN-------AAD 100 (239)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTSTTSS-------CCCCCTTSCC-HHHHHHHHTCHHHHHHHHHHTCCTT-------CCC
T ss_pred hhhHHHHHHHHcCCHHHHHHHHHcCCC-------CCCcCCCCCC-HHHHHHHcCCHHHHHHHHHcCCCCC-------ccC
Confidence 478999999999999999999999987 7788999999 9999999999999999999999987 666
Q ss_pred cCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCC-hHHHHH--HHcCCHHHHHHHHhhhccCCcccccc-----
Q 039985 180 WAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQ-NILHVA--VKRRQYKVFELITKEMQLSVPKWASR----- 251 (357)
Q Consensus 180 ~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~-TpLh~A--~~~g~~~iv~~Ll~~~~~~~~~~~~~----- 251 (357)
..|+||||+||..|+.++|++|+++|++++ .+|..|. ||||+| +..|+.+++++|+.. +++++.
T Consensus 101 ~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~---~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~-----~a~~~~~~~~~ 172 (239)
T 1ycs_B 101 SDGWTPLHCAASCNNVQVCKFLVESGAAVF---AMTYSDMQTAADKCEEMEEGYTQCSQFLYGV-----QEKMGIMNKGV 172 (239)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCCTT---CCCSSSCCCHHHHCCSSSTTCCCHHHHHHHH-----HHHTTTTGGGE
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCcc---eecCCCCcchHHHHHHhhhccHHHHHHHHHh-----hhcccccccce
Confidence 679999999999999999999999999998 7887776 999999 889999999999984 344443
Q ss_pred ----ccCCCCcHHHHHHHcCC
Q 039985 252 ----IDKKGYTLLHHVADMKH 268 (357)
Q Consensus 252 ----~d~~G~TpLh~Aa~~g~ 268 (357)
.|..|.|++++|...|.
T Consensus 173 ~~al~d~~~~~~~eLa~~~G~ 193 (239)
T 1ycs_B 173 IYALWDYEPQNDDELPMKEGD 193 (239)
T ss_dssp EEESSCBCCSSTTBCCBCSSC
T ss_pred EEEEeccCCCCCCcccccCCC
Confidence 37788999999988886
|
| >2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C | Back alignment and structure |
|---|
Probab=99.94 E-value=3.4e-26 Score=187.16 Aligned_cols=124 Identities=13% Similarity=0.087 Sum_probs=116.3
Q ss_pred CCCCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccC
Q 039985 98 SPANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKD 177 (357)
Q Consensus 98 ~~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~ 177 (357)
...|.||||+|+..|+.+++++|++.+.+ .+..|..|.| |||+|+..|+.+++++|+++|++++ .
T Consensus 11 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~-------~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~g~~~~-------~ 75 (136)
T 2jab_A 11 GSDLGKKLLEAARAGQDDEVRILMANGAD-------VNAKDEYGLT-PLYLATAHGHLEIVEVLLKNGADVN-------A 75 (136)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHHHTTCC-------TTCCCTTSCC-HHHHHHHHTCHHHHHHHHHTTCCTT-------C
T ss_pred cccccHHHHHHHHhCCHHHHHHHHHcCCC-------CCCcCCCCCC-HHHHHHHcCCHHHHHHHHHcCCCCC-------c
Confidence 34588999999999999999999999988 7778999999 9999999999999999999999987 5
Q ss_pred CCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHh
Q 039985 178 KNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITK 239 (357)
Q Consensus 178 ~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~ 239 (357)
+|..|.||||+|+..|+.+++++|+++|+++. .+|..|+||||+|+..|+.+++++|++
T Consensus 76 ~d~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---~~~~~g~tpl~~A~~~~~~~~~~~Ll~ 134 (136)
T 2jab_A 76 VDAIGFTPLHLAAFIGHLEIAEVLLKHGADVN---AQDKFGKTAFDISIGNGNEDLAEILQK 134 (136)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTT---CCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCc---CcCCCCCCHHHHHHHCCCHHHHHHHHH
Confidence 66679999999999999999999999999998 999999999999999999999999986
|
| >3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* | Back alignment and structure |
|---|
Probab=99.93 E-value=5.5e-26 Score=191.63 Aligned_cols=152 Identities=18% Similarity=0.169 Sum_probs=129.9
Q ss_pred cCCCCCcHHHHHHHhcCcHHHHHHHHHcCC-CCCCCCCCccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccC
Q 039985 137 CTNKGNMIKAKKFVDFSAAELVELFVKKDC-TIKGVPNHKKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLN 215 (357)
Q Consensus 137 ~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~-~~~~~~~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d 215 (357)
.|..|.| |||.|+..|+.++++.|++.+. ++. ..+..|.||||+|+..|+.+++++|+++|+++. .+|
T Consensus 4 ~~~~~~~-~l~~A~~~g~~~~v~~ll~~~~~~~~-------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---~~~ 72 (165)
T 3twr_A 4 GNSEADR-QLLEAAKAGDVETVKKLCTVQSVNCR-------DIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVH---AKD 72 (165)
T ss_dssp --CHHHH-HHHHHHHHTCHHHHHHHCCTTTTTCC-------CTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT---CCC
T ss_pred CcchhhH-HHHHHHHhCCHHHHHHHHHcCCCCcc-------ccccCCCCHHHHHHHcChHHHHHHHHhcCCCCC---ccC
Confidence 3566778 9999999999999999998654 332 455568999999999999999999999999998 999
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcHHHHHHHcCCCCCCCCCCChhHHHHHhhhHHHHHHhc
Q 039985 216 EKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTLLHHVADMKHYKEGTRPGPVLQFQEELQLFEHVKEIM 295 (357)
Q Consensus 216 ~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~~~~~t~L~la~~l~~~~~v~~ll 295 (357)
..|+||||+|+..|+.+++++|++ .+.+++.+|..|+||||+|+..|+. +.++.++
T Consensus 73 ~~g~t~L~~A~~~~~~~~v~~Ll~-----~g~~~~~~~~~g~t~L~~A~~~~~~-------------------~~v~~Ll 128 (165)
T 3twr_A 73 KGGLVPLHNACSYGHYEVAELLVK-----HGAVVNVADLWKFTPLHEAAAKGKY-------------------EICKLLL 128 (165)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHH-----TTCCTTCCCTTCCCHHHHHHHTTCH-------------------HHHHHHH
T ss_pred CCCCCHHHHHHHcCcHHHHHHHHh-----CCCCCCCcCCCCCCHHHHHHHcCCH-------------------HHHHHHH
Confidence 999999999999999999999998 6889999999999999999999973 3455555
Q ss_pred c-CcccccccccCCCCHHHHHhhhhHHHHH
Q 039985 296 P-RHYAMHRDEKNKMTASDLFNLTHEDQLR 324 (357)
Q Consensus 296 ~-~~~~~~~n~~g~~Tp~dl~~~~~~~~~~ 324 (357)
. ..+.+.+|.+|+ ||++++.+.+.+.++
T Consensus 129 ~~ga~~~~~~~~g~-t~l~~a~~~~~~i~~ 157 (165)
T 3twr_A 129 QHGADPTKKNRDGN-TPLDLVKDGDTDIQD 157 (165)
T ss_dssp HTTCCTTCCCTTSC-CTGGGSCTTCHHHHH
T ss_pred HcCCCCcccCCCCC-ChhHhHhcCChHHHH
Confidence 3 347888999999 999999876665443
|
| >3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A | Back alignment and structure |
|---|
Probab=99.93 E-value=9.6e-26 Score=192.98 Aligned_cols=133 Identities=13% Similarity=0.072 Sum_probs=124.0
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCc
Q 039985 101 NISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNW 180 (357)
Q Consensus 101 g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~ 180 (357)
|.||||+|+..|+.+++++|++.+++ .+..|..|.| |||+|+..|+.+++++|+++|++++ .+|.
T Consensus 39 g~t~L~~A~~~~~~~~v~~Ll~~g~~-------~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~g~~~~-------~~d~ 103 (179)
T 3f6q_A 39 GFSPLHWACREGRSAVVEMLIMRGAR-------INVMNRGDDT-PLHLAASHGHRDIVQKLLQYKADIN-------AVNE 103 (179)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCC-------TTCCCTTCCC-HHHHHHHTTCHHHHHHHHHTTCCTT-------CCCT
T ss_pred CCCHHHHHHHcCcHHHHHHHHHcCCC-------CCCcCCCCCC-HHHHHHHcCCHHHHHHHHHcCCCCC-------ccCC
Confidence 78999999999999999999999998 7788999999 9999999999999999999999987 5666
Q ss_pred CcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCC
Q 039985 181 AIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKG 256 (357)
Q Consensus 181 ~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G 256 (357)
.|.||||+|+..|+.+++++|+++|+++. .+|..|+||||+|+..++.+++++|++ .+++++..+..+
T Consensus 104 ~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~---~~~~~g~tpl~~A~~~~~~~~~~~L~~-----~g~~~~~~~~~~ 171 (179)
T 3f6q_A 104 HGNVPLHYACFWGQDQVAEDLVANGALVS---ICNKYGEMPVDKAKAPLRELLRERAEK-----MGQNLNRIPYKD 171 (179)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTCCSS---BCCTTSCCGGGGSCHHHHHHHHHHHHH-----TTCCCSCBCCCC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCcc---hhccCCCCcHHHHHHHHHHHHHHHHHH-----hhcCcccCCccc
Confidence 79999999999999999999999999998 999999999999999999999999988 677777776554
|
| >1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 | Back alignment and structure |
|---|
Probab=99.93 E-value=3.8e-25 Score=177.05 Aligned_cols=123 Identities=19% Similarity=0.262 Sum_probs=115.9
Q ss_pred CCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCC
Q 039985 100 ANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKN 179 (357)
Q Consensus 100 ~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~ 179 (357)
.|.||||+|+..|+.++++.|++.+.+ .+..+..|.| |||+|+..|+.+++++|+++|++++ .++
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~-------~~~~~~~g~t-~L~~A~~~~~~~~~~~Ll~~g~~~~-------~~~ 65 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGAD-------VNAKDKNGRT-PLHLAARNGHLEVVKLLLEAGADVN-------AKD 65 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCC-------TTCCCTTSCC-HHHHHHHHTCHHHHHHHHHTTCCTT-------CCC
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCC-------CCCcCCCCCc-HHHHHHHcCcHHHHHHHHHcCCCCc-------ccC
Confidence 389999999999999999999999887 6778999999 9999999999999999999999887 556
Q ss_pred cCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhh
Q 039985 180 WAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKE 240 (357)
Q Consensus 180 ~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~ 240 (357)
..|.||||+|+..|+.+++++|+++|+++. .+|..|+||||+|+..|+.+++++|++.
T Consensus 66 ~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~---~~~~~g~t~l~~A~~~~~~~~~~~Ll~~ 123 (126)
T 1n0r_A 66 KNGRTPLHLAARNGHLEVVKLLLEAGADVN---AKDKNGRTPLHLAARNGHLEVVKLLLEA 123 (126)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHTTCCTT---CCCTTSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred CCCCcHHHHHHHcChHHHHHHHHHcCCCCc---ccCCCCCCHHHHHHHcCcHHHHHHHHHc
Confidence 669999999999999999999999999998 9999999999999999999999999873
|
| >1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A | Back alignment and structure |
|---|
Probab=99.93 E-value=6.6e-26 Score=189.87 Aligned_cols=143 Identities=8% Similarity=0.008 Sum_probs=111.9
Q ss_pred hhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCccccccc
Q 039985 135 KDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNL 214 (357)
Q Consensus 135 ~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~ 214 (357)
...+..|.| |||+|+..|+.++|++|+++|++++ .++..|.||||+|+ .|+.+++++|+++|++++ .+
T Consensus 6 ~~~~~~~~t-~L~~A~~~g~~~~v~~Ll~~g~~~~-------~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~---~~ 73 (156)
T 1bi7_B 6 GSSMEPSAD-WLATAAARGRVEEVRALLEAGANPN-------APNSYGRRPIQVMM-MGSARVAELLLLHGAEPN---CA 73 (156)
T ss_dssp ----CCSTT-HHHHHHHHTCHHHHHHHHTTTCCTT-------CCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCC---CC
T ss_pred cCCCccchH-HHHHHHHcCCHHHHHHHHHcCCCCC-------CCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCC---Cc
Confidence 456788999 9999999999999999999999887 55667999999986 999999999999999998 99
Q ss_pred CCCCCh-HHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcHHHHHHHcCCCCCCCCCCChhHHHHHhhhHHHHHH
Q 039985 215 NEKEQN-ILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTLLHHVADMKHYKEGTRPGPVLQFQEELQLFEHVKE 293 (357)
Q Consensus 215 d~~G~T-pLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~~~~~t~L~la~~l~~~~~v~~ 293 (357)
|..|+| |||+|+..|+.+++++|++ .+++++.+|..|+||||+|+..|+. +.++.
T Consensus 74 d~~g~ttpL~~A~~~~~~~~v~~Ll~-----~ga~~~~~d~~g~tpl~~A~~~~~~-------------------~~v~~ 129 (156)
T 1bi7_B 74 DPATLTRPVHDAAREGFLDTLVVLHR-----AGARLDVRDAWGRLPVDLAEELGHR-------------------DVARY 129 (156)
T ss_dssp CTTTCCCHHHHHHHHTCHHHHHHHHH-----HTCCSSCCCTTCCCHHHHHHHHTCH-------------------HHHHH
T ss_pred CCCCCcHHHHHHHHCCCHHHHHHHHH-----cCCCCcccCCCCCCHHHHHHHhCHH-------------------HHHHH
Confidence 999999 9999999999999999998 6789999999999999999999973 45666
Q ss_pred hcc-CcccccccccCCCCHHHH
Q 039985 294 IMP-RHYAMHRDEKNKMTASDL 314 (357)
Q Consensus 294 ll~-~~~~~~~n~~g~~Tp~dl 314 (357)
++. +.+.+.+|..|. ||.+-
T Consensus 130 Ll~~ga~~~~~~~~g~-t~~~~ 150 (156)
T 1bi7_B 130 LRAAAGGTRGSNHARI-DAAEG 150 (156)
T ss_dssp HSSCC-----------------
T ss_pred HHHcCCCCCccCcCcC-ccccc
Confidence 664 347888999999 88763
|
| >1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 | Back alignment and structure |
|---|
Probab=99.92 E-value=3.2e-25 Score=181.40 Aligned_cols=118 Identities=8% Similarity=0.028 Sum_probs=110.9
Q ss_pred hhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccc
Q 039985 134 KKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDN 213 (357)
Q Consensus 134 ~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~ 213 (357)
.+..+..|.| |||+|+..|+.+++++|+++|++++ .+|..|+||||+|+. |+.+++++|+++|++++ .
T Consensus 5 ~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~g~~~~-------~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~---~ 72 (136)
T 1d9s_A 5 IHMLGGSSDA-GLATAAARGQVETVRQLLEAGADPN-------ALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPN---C 72 (136)
T ss_dssp CSCCCCCCSC-HHHHHHHTTCHHHHHHHHHTTCCTT-------CCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSS---C
T ss_pred ccCCCCCCcc-HHHHHHHcCCHHHHHHHHHcCCCcC-------CcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCC---C
Confidence 4567899999 9999999999999999999999887 556679999999999 99999999999999998 8
Q ss_pred cCCC-CChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcHHHHHHHcCC
Q 039985 214 LNEK-EQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTLLHHVADMKH 268 (357)
Q Consensus 214 ~d~~-G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~ 268 (357)
+|.. |+||||+|+..|+.+++++|++ .+++++.+|..|.||||+|+..|+
T Consensus 73 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~-----~ga~~~~~d~~g~tpl~~A~~~~~ 123 (136)
T 1d9s_A 73 ADPATLTRPVHDAAREGFLDTLVVLHR-----AGARLDVCDAWGRLPVDLAEEQGH 123 (136)
T ss_dssp CBTTTTBCHHHHHHHHTCHHHHHHHHH-----TCCCCCCCSSSSSCHHHHHHHHTC
T ss_pred cCCCCCCCHHHHHHHcCCHHHHHHHHH-----cCCCCCccCCCCCCHHHHHHHcCC
Confidence 9999 9999999999999999999998 688999999999999999999997
|
| >2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.92 E-value=2e-25 Score=207.72 Aligned_cols=140 Identities=14% Similarity=0.092 Sum_probs=120.1
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhh------cCCCCCcHHHHHHHhc---CcHHHHHHHHHcCCCCCCC
Q 039985 101 NISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKD------CTNKGNMIKAKKFVDF---SAAELVELFVKKDCTIKGV 171 (357)
Q Consensus 101 g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~------~~~~g~t~pLh~A~~~---g~~~iv~~Ll~~g~~~~~~ 171 (357)
+.++||.|+..|+.+.++.|++.+.+ .+. .+..|.| |||+|+.. |+.++|++|+++|++++
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~g~d-------~~~~~~~~~~~~~g~t-~Lh~A~~~~~~~~~~iv~~Ll~~gadvn-- 220 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFANGQD-------FGQPLPGPDAQAPEEL-VLHLAVKVANQASLPLVDFIIQNGGHLD-- 220 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTCC-------TTSCEECSSSCSCEEC-HHHHHHHTCCTTTHHHHHHHHHHSSCTT--
T ss_pred hHHHHhhhhhccCHHHHHHHHhcCCc-------ccccCCCcccCCCCcc-HHHHHHHhcccCcHHHHHHHHhcCCCCC--
Confidence 44679999999999999999999887 444 5889999 99999997 89999999999999987
Q ss_pred CCCccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCcccccc
Q 039985 172 PNHKKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASR 251 (357)
Q Consensus 172 ~~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~ 251 (357)
.+|..|.||||+|+..|+.++|++|+++|+++. .+|..|+||||+|+..|+.+++++|++. +++
T Consensus 221 -----~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~---~~d~~G~TpL~~A~~~~~~~iv~~Ll~~-----ga~--- 284 (301)
T 2b0o_E 221 -----AKAADGNTALHYAALYNQPDCLKLLLKGRALVG---TVNEAGETALDIARKKHHKECEELLEQA-----QAG--- 284 (301)
T ss_dssp -----CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCCS---CCCTTSCCHHHHHHHHTCHHHHHHHHHH-----HHH---
T ss_pred -----CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC---CcCCCCCCHHHHHHHcCCHHHHHHHHHh-----cCC---
Confidence 566679999999999999999999999999998 9999999999999999999999999884 332
Q ss_pred ccCCCCcHHHHHHHcCCC
Q 039985 252 IDKKGYTLLHHVADMKHY 269 (357)
Q Consensus 252 ~d~~G~TpLh~Aa~~g~~ 269 (357)
.|.||||+|+..|+.
T Consensus 285 ---~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 285 ---TFAFPLHVDYSWVIS 299 (301)
T ss_dssp ---TTSSCCC--------
T ss_pred ---CCCChhHHHHhcCCc
Confidence 689999999999863
|
| >1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B | Back alignment and structure |
|---|
Probab=99.92 E-value=1.6e-24 Score=180.73 Aligned_cols=123 Identities=11% Similarity=0.150 Sum_probs=114.7
Q ss_pred CCCCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccC
Q 039985 98 SPANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKD 177 (357)
Q Consensus 98 ~~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~ 177 (357)
+..|.||||+ +..|+.++++.|++.+++ .+..|..|.| |||+|+..|+.+++++|+++|++++ .
T Consensus 33 ~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~-------~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~g~~~~-------~ 96 (156)
T 1bd8_A 33 NRFGKTALQV-MMFGSTAIALELLKQGAS-------PNVQDTSGTS-PVHDAARTGFLDTLKVLVEHGADVN-------V 96 (156)
T ss_dssp CTTSCCHHHH-SCTTCHHHHHHHHHTTCC-------TTCCCTTSCC-HHHHHHHTTCHHHHHHHHHTTCCSC-------C
T ss_pred CCCCCcHHHH-HHcCCHHHHHHHHHCCCC-------CCCcCCCCCC-HHHHHHHcCcHHHHHHHHHcCCCCC-------C
Confidence 3459999999 999999999999999998 7788999999 9999999999999999999999987 5
Q ss_pred CCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhh
Q 039985 178 KNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKE 240 (357)
Q Consensus 178 ~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~ 240 (357)
+|..|.||||+|+..|+.+++++|+++ +++. .+|..|+||||+|+..|+.+++++|+++
T Consensus 97 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~---~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 97 PDGTGALPIHLAVQEGHTAVVSFLAAE-SDLH---RRDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTT---CCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred cCCCCCcHHHHHHHhChHHHHHHHHhc-cCCC---CcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 666799999999999999999999999 8887 9999999999999999999999999863
|
| >3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A | Back alignment and structure |
|---|
Probab=99.92 E-value=1.4e-26 Score=208.82 Aligned_cols=166 Identities=14% Similarity=0.107 Sum_probs=126.2
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCc
Q 039985 101 NISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNW 180 (357)
Q Consensus 101 g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~ 180 (357)
+.++++.++..|+.+.++.+..... ..+..|.| |||+|+..|+.++|++|++ |++++ .+|.
T Consensus 15 ~~~~~l~~~~~g~~~~~~~~~~~~~----------~~~~~g~t-~L~~A~~~g~~~~v~~Ll~-~~~~~-------~~d~ 75 (244)
T 3ui2_A 15 GAMEYLIEWKDGHSPSWVPSSYIAA----------DVVSEYET-PWWTAARKADEQALSQLLE-DRDVD-------AVDE 75 (244)
T ss_dssp TEEEEEEEESSCCCCEEEEGGGSCH----------HHHHHHHH-HHHHHHTTTCHHHHHHTTT-TCCTT-------CBCT
T ss_pred CccHHHHHHHcCCCccccccccccc----------ccccCCCC-HHHHHHHcCCHHHHHHHHc-CCCCC-------CcCC
Confidence 3455555555555544333332222 23456778 9999999999999999998 77776 5566
Q ss_pred CcchHHHHHHHCCCHHHHHHHHhhCCCcccccccC-CCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcH
Q 039985 181 AIRLTLLFAASNGITEILKEIIHQHPQAILLDNLN-EKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTL 259 (357)
Q Consensus 181 ~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d-~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~Tp 259 (357)
.|+||||+||..|+.++|++|+++|++++ .+| ..|+||||+|+..|+.+++++|+. .+++++.+|..|+||
T Consensus 76 ~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~---~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-----~ga~~~~~d~~g~t~ 147 (244)
T 3ui2_A 76 NGRTALLFVAGLGSDKCVRLLAEAGADLD---HRDMRGGLTALHMAAGYVRPEVVEALVE-----LGADIEVEDERGLTA 147 (244)
T ss_dssp TSCBHHHHHHHHTCHHHHHHHHHTTCCTT---CCCSSSCCCHHHHHHHTTCHHHHHHHHH-----TTCCTTCCCTTCCCH
T ss_pred CCCCHHHHHHHCCCHHHHHHHHHcCCCCC---cCCCCCCCCHHHHHHHcCCHHHHHHHHH-----CCCCCCCCCCCCCcH
Confidence 68999999999999999999999998887 666 779999999999999999999987 678888899999999
Q ss_pred HHHHHHcCCCCCCCCCCChhHHHHHhhhHHHHHHhcc
Q 039985 260 LHHVADMKHYKEGTRPGPVLQFQEELQLFEHVKEIMP 296 (357)
Q Consensus 260 Lh~Aa~~g~~~~~~~~~t~L~la~~l~~~~~v~~ll~ 296 (357)
||+|+..++.. ...++|+.+...+..+.++.++.
T Consensus 148 l~~A~~~~~~~---~~~~~l~~a~~~g~~~iv~~L~~ 181 (244)
T 3ui2_A 148 LELAREILKTT---PKGNPMQFGRRIGLEKVINVLEG 181 (244)
T ss_dssp HHHHHHHHTTC---CCSSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcc---CCCCHHHHHHHcChHHHHHHHHH
Confidence 99998877642 45588988888877777666653
|
| >3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A | Back alignment and structure |
|---|
Probab=99.92 E-value=4.7e-25 Score=189.69 Aligned_cols=139 Identities=14% Similarity=0.137 Sum_probs=122.4
Q ss_pred cCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccC-
Q 039985 137 CTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLN- 215 (357)
Q Consensus 137 ~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d- 215 (357)
.+..|.| |||+|+..|+.+++++|++ |++++ .+|..|+||||+||..|+.+++++|+++|++++ .+|
T Consensus 40 ~~~~g~t-~L~~A~~~g~~~~v~~Ll~-~~~~~-------~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~---~~~~ 107 (183)
T 3deo_A 40 VVSEYET-PWWTAARKADEQALSQLLE-DRDVD-------AVDENGRTALLFVAGLGSDKCVRLLAEAGADLD---HRDM 107 (183)
T ss_dssp HHHHHHH-HHHHHHHTTCHHHHHHHTT-TSCTT-------CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT---CCCS
T ss_pred CCCCCCC-HHHHHHHcCCHHHHHHHHh-cCCCC-------CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC---cCCC
Confidence 4567888 9999999999999999999 88877 566679999999999999999999999999998 777
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcHHHHHHHcCCCCCCCCCCChhHHHHHhhhHHHHHHhc
Q 039985 216 EKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTLLHHVADMKHYKEGTRPGPVLQFQEELQLFEHVKEIM 295 (357)
Q Consensus 216 ~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~~~~~t~L~la~~l~~~~~v~~ll 295 (357)
..|+||||+|+..|+.+++++|++ .+++++.+|.+|+||||+|++.++.. ...++|+.+...+..+.++.+.
T Consensus 108 ~~g~tpL~~A~~~~~~~~v~~Ll~-----~ga~~~~~d~~g~tpl~~A~~~~~~~---~~~~~l~~a~~~~~~~i~~~L~ 179 (183)
T 3deo_A 108 RGGLTALHMAAGYVRPEVVEALVE-----LGADIEVEDERGLTALELAREILKTT---PKGNPMQFGRRIGLEKVINVLE 179 (183)
T ss_dssp SSSCCHHHHHHHTTCHHHHHHHHH-----HTCCTTCCCTTSCCHHHHHHHHHHTC---CCCSHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHhcCcHHHHHHHHH-----cCCCCcCCCCCCCCHHHHHHHhccCc---ccccHHHHHHHcCHHHHHHHHH
Confidence 899999999999999999999998 67899999999999999999988753 4457888888877766655543
|
| >2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C | Back alignment and structure |
|---|
Probab=99.91 E-value=1.4e-24 Score=177.55 Aligned_cols=117 Identities=15% Similarity=0.096 Sum_probs=107.8
Q ss_pred cCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCC
Q 039985 137 CTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNE 216 (357)
Q Consensus 137 ~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~ 216 (357)
....|.| |||+|+..|+.+++++|+++|++++ .+|..|.||||+||..|+.+++++|+++|++++ .+|.
T Consensus 10 ~~~~~~t-~l~~A~~~g~~~~v~~Ll~~g~~~~-------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---~~d~ 78 (136)
T 2jab_A 10 HGSDLGK-KLLEAARAGQDDEVRILMANGADVN-------AKDEYGLTPLYLATAHGHLEIVEVLLKNGADVN---AVDA 78 (136)
T ss_dssp --CHHHH-HHHHHHHHTCHHHHHHHHHTTCCTT-------CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT---CCCT
T ss_pred ccccccH-HHHHHHHhCCHHHHHHHHHcCCCCC-------CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC---cCCC
Confidence 4556777 9999999999999999999999987 556679999999999999999999999999998 8999
Q ss_pred CCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcHHHHHHHcCCC
Q 039985 217 KEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTLLHHVADMKHY 269 (357)
Q Consensus 217 ~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~ 269 (357)
.|+||||+|+..|+.+++++|++ .+++++.+|.+|+||||+|+..|+.
T Consensus 79 ~g~t~L~~A~~~~~~~~v~~Ll~-----~g~~~~~~~~~g~tpl~~A~~~~~~ 126 (136)
T 2jab_A 79 IGFTPLHLAAFIGHLEIAEVLLK-----HGADVNAQDKFGKTAFDISIGNGNE 126 (136)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHH-----TTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHH-----cCCCCcCcCCCCCCHHHHHHHCCCH
Confidence 99999999999999999999998 6789999999999999999999973
|
| >3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 | Back alignment and structure |
|---|
Probab=99.91 E-value=7.6e-25 Score=179.13 Aligned_cols=117 Identities=13% Similarity=0.091 Sum_probs=109.6
Q ss_pred hcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccC
Q 039985 136 DCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLN 215 (357)
Q Consensus 136 ~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d 215 (357)
..|..|.| |||+|+..|+.+++++|++.|++++ .+|..|.||||+|+..|+.+++++|+++|+++. .+|
T Consensus 5 ~~~~~g~t-~L~~A~~~~~~~~~~~Ll~~g~~~~-------~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~---~~~ 73 (137)
T 3c5r_A 5 FTNHRGET-LLHIASIKGDIPSVEYLLQNGSDPN-------VKDHAGWTPLHEACNHGHLKVVELLLQHKALVN---TTG 73 (137)
T ss_dssp CCCTTCCC-HHHHHHHHTCHHHHHHHHHTTCCSC-------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT---CCC
T ss_pred CcCCCCCC-HHHHHHHcCCHHHHHHHHHcCCCCC-------cCCCCCCCHHHHHHHcCCHHHHHHHHHcCCccc---CcC
Confidence 46889999 9999999999999999999999887 566679999999999999999999999999998 999
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcHHHHHHHcCC
Q 039985 216 EKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTLLHHVADMKH 268 (357)
Q Consensus 216 ~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~ 268 (357)
..|+||||+|+..|+.+++++|++ .+++++.+|..|.||||+|+..+.
T Consensus 74 ~~g~t~L~~A~~~~~~~~v~~Ll~-----~ga~~~~~~~~g~tpl~~A~~~~~ 121 (137)
T 3c5r_A 74 YQNDSPLHDAAKNGHVDIVKLLLS-----YGASRNAVNIFGLRPVDYTDDESM 121 (137)
T ss_dssp GGGCCHHHHHHHTTCHHHHHHHHH-----TTCCTTCCCTTSCCGGGGCCCHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHH-----cCCCCCCCCCCCCCHHHHHhhccH
Confidence 999999999999999999999998 688999999999999999987664
|
| >3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 | Back alignment and structure |
|---|
Probab=99.91 E-value=4.8e-25 Score=180.32 Aligned_cols=124 Identities=14% Similarity=0.130 Sum_probs=114.4
Q ss_pred CCCCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccC
Q 039985 98 SPANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKD 177 (357)
Q Consensus 98 ~~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~ 177 (357)
+..|.||||+|+..|+.+++++|++.+.+ .+..|..|.| |||+|+..|+.+++++|+++|++++ .
T Consensus 7 ~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-------~~~~~~~g~t-~L~~A~~~~~~~~~~~Ll~~g~~~~-------~ 71 (137)
T 3c5r_A 7 NHRGETLLHIASIKGDIPSVEYLLQNGSD-------PNVKDHAGWT-PLHEACNHGHLKVVELLLQHKALVN-------T 71 (137)
T ss_dssp CTTCCCHHHHHHHHTCHHHHHHHHHTTCC-------SCCCCTTSCC-HHHHHHHTTCHHHHHHHHHTTCCTT-------C
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCC-------CCcCCCCCCC-HHHHHHHcCCHHHHHHHHHcCCccc-------C
Confidence 44599999999999999999999999988 7788999999 9999999999999999999999987 5
Q ss_pred CCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHh
Q 039985 178 KNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITK 239 (357)
Q Consensus 178 ~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~ 239 (357)
+|..|.||||+|+..|+.+++++|+++|+++. .+|..|+||||+|+..++.+++++|.+
T Consensus 72 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~---~~~~~g~tpl~~A~~~~~~~~l~~l~~ 130 (137)
T 3c5r_A 72 TGYQNDSPLHDAAKNGHVDIVKLLLSYGASRN---AVNIFGLRPVDYTDDESMKSLLLLPEK 130 (137)
T ss_dssp CCGGGCCHHHHHHHTTCHHHHHHHHHTTCCTT---CCCTTSCCGGGGCCCHHHHHHHSCC--
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC---CCCCCCCCHHHHHhhccHHHHHhhccc
Confidence 66679999999999999999999999999998 999999999999999999888888754
|
| >3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A | Back alignment and structure |
|---|
Probab=99.91 E-value=9.6e-25 Score=175.26 Aligned_cols=113 Identities=13% Similarity=0.116 Sum_probs=100.9
Q ss_pred CCCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCC
Q 039985 99 PANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDK 178 (357)
Q Consensus 99 ~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~ 178 (357)
..|.||||+|+..|+.++++.|++.+.+ .+..|..|.| |||+|+..|+.+++++|+++|++++ .+
T Consensus 5 ~~~~~~l~~A~~~~~~~~v~~ll~~~~~-------~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~g~~~~-------~~ 69 (123)
T 3aaa_C 5 SMCDKEFMWALKNGDLDEVKDYVAKGED-------VNRTLEGGRK-PLHYAADCGQLEILEFLLLKGADIN-------AP 69 (123)
T ss_dssp --CHHHHHHHHHTTCHHHHHHHHHTTCC-------TTSCCTTSSC-HHHHHHHTTCHHHHHHHHTTTCCTT-------CC
T ss_pred cccchHHHHHHHcCCHHHHHHHHHcCCC-------cCccCCCCCc-HHHHHHHcCCHHHHHHHHHcCCCCC-------cC
Confidence 4578999999999999999999999887 6778899999 9999999999999999999999887 56
Q ss_pred CcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcC
Q 039985 179 NWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRR 229 (357)
Q Consensus 179 ~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g 229 (357)
|..|+||||+|+..|+.+++++|+++|+++. .+|..|+||||+|+..+
T Consensus 70 d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~---~~~~~g~t~l~~A~~~~ 117 (123)
T 3aaa_C 70 DKHHITPLLSAVYEGHVSCVKLLLSKGADKT---VKGPDGLTAFEATDNQA 117 (123)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT---CCCTTSCCHHHHCCCHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC---CcCCCCCCHHHHhCCHH
Confidence 6679999999999999999999999999988 89999999999994433
|
| >2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 | Back alignment and structure |
|---|
Probab=99.91 E-value=5.5e-26 Score=217.61 Aligned_cols=145 Identities=10% Similarity=-0.011 Sum_probs=117.8
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCc
Q 039985 101 NISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNW 180 (357)
Q Consensus 101 g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~ 180 (357)
+.||||+|++.|+.++|++|++.++.+.. ....+..|.| |||+|+..|+.++|++|+++|++....... .+
T Consensus 92 ~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~----~~~~~~~~~t-pL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~--~~-- 162 (376)
T 2aja_A 92 SEVICFVAAITGCSSALDTLCLLLTSDEI----VKVIQAENYQ-AFRLAAENGHLHVLNRLCELAPTEIMAMIQ--AE-- 162 (376)
T ss_dssp HHHHHHHHHHHCCHHHHHHHTTC--CCSS----CC--CHHHHH-HHHHHHHTTCHHHHHHHHHSCTTTHHHHHS--HH--
T ss_pred cCCHHHHHHHcCCHHHHHHHHHcCCcHHH----HHHhccCCCC-HHHHHHHcCCHHHHHHHHhCCCCccccccC--CC--
Confidence 56999999999999999999999873100 1234556788 999999999999999999999753200000 22
Q ss_pred CcchHHHHHHHCCCHHHHHHHHhhCCCcccccc--cCCCCChHHHHHH-HcCCHHHHHHHHhhhccCCccccccccCCCC
Q 039985 181 AIRLTLLFAASNGITEILKEIIHQHPQAILLDN--LNEKEQNILHVAV-KRRQYKVFELITKEMQLSVPKWASRIDKKGY 257 (357)
Q Consensus 181 ~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~--~d~~G~TpLh~A~-~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~ 257 (357)
+.||||+||..|+.++|++|+++|+++. . .|..|+||||+|+ .+|+.++|++|++. +. .|.
T Consensus 163 -~~TpLh~Aa~~G~~eiv~~Ll~~ga~~~---~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~-----ga-------~~~ 226 (376)
T 2aja_A 163 -NYHAFRLAAENGHLHVLNRLCELAPTEA---TAMIQAENYYAFRWAAVGRGHHNVINFLLDC-----PV-------MLA 226 (376)
T ss_dssp -HHHHHHHHHHTTCHHHHHHHHHSCGGGH---HHHHHHHHHHHHHHHHSTTCCHHHHHHHTTS-----HH-------HHH
T ss_pred -CCCHHHHHHHCCCHHHHHHHHHcCCccc---hhccCCCCCCHHHHHHHHCCCHHHHHHHHhC-----CC-------ccc
Confidence 3899999999999999999999999987 6 8899999999999 99999999999873 22 389
Q ss_pred cHHHHHHHcCCCC
Q 039985 258 TLLHHVADMKHYK 270 (357)
Q Consensus 258 TpLh~Aa~~g~~~ 270 (357)
||||+|+..|+.+
T Consensus 227 taL~~Aa~~g~~e 239 (376)
T 2aja_A 227 YAEIHEFEYGEKY 239 (376)
T ss_dssp HHHHCTTTTTTTT
T ss_pred hHHHHHHHCCCHH
Confidence 9999999999876
|
| >3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A | Back alignment and structure |
|---|
Probab=99.91 E-value=4e-24 Score=171.59 Aligned_cols=113 Identities=15% Similarity=0.070 Sum_probs=102.9
Q ss_pred CCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCC
Q 039985 138 TNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEK 217 (357)
Q Consensus 138 ~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~ 217 (357)
+..|.| |||+|+..|+.+++++|++.|++++ .+|..|+||||+||..|+.+++++|+++|++++ .+|..
T Consensus 4 ~~~~~~-~l~~A~~~~~~~~v~~ll~~~~~~~-------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---~~d~~ 72 (123)
T 3aaa_C 4 GSMCDK-EFMWALKNGDLDEVKDYVAKGEDVN-------RTLEGGRKPLHYAADCGQLEILEFLLLKGADIN---APDKH 72 (123)
T ss_dssp ---CHH-HHHHHHHTTCHHHHHHHHHTTCCTT-------SCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTT---CCCTT
T ss_pred ccccch-HHHHHHHcCCHHHHHHHHHcCCCcC-------ccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC---cCCCC
Confidence 456778 9999999999999999999999877 556669999999999999999999999999998 99999
Q ss_pred CChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcHHHHHHHc
Q 039985 218 EQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTLLHHVADM 266 (357)
Q Consensus 218 G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~ 266 (357)
|+||||+|+..|+.+++++|++ .+++++.+|.+|.||||+|+..
T Consensus 73 g~tpL~~A~~~~~~~~v~~Ll~-----~ga~~~~~~~~g~t~l~~A~~~ 116 (123)
T 3aaa_C 73 HITPLLSAVYEGHVSCVKLLLS-----KGADKTVKGPDGLTAFEATDNQ 116 (123)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHH-----TTCCTTCCCTTSCCHHHHCCCH
T ss_pred CCCHHHHHHHcCCHHHHHHHHH-----cCCCCCCcCCCCCCHHHHhCCH
Confidence 9999999999999999999998 6789999999999999999543
|
| >3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A | Back alignment and structure |
|---|
Probab=99.91 E-value=1.3e-24 Score=192.34 Aligned_cols=121 Identities=12% Similarity=0.112 Sum_probs=93.5
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHc-CCCCCCCCCCccCCC
Q 039985 101 NISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKK-DCTIKGVPNHKKDKN 179 (357)
Q Consensus 101 g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~-g~~~~~~~~~~~~~~ 179 (357)
|.||||+||..|+.++++.|++.+.+ .+..|..|.| |||+|+..|+.++|++|++. |++++ .+|
T Consensus 73 g~t~L~~A~~~g~~~~v~~Ll~~g~~-------~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~~g~~~~-------~~d 137 (222)
T 3ehr_A 73 IDNPLHEAAKRGNLSWLRECLDNRVG-------VNGLDKAGST-ALYWACHGGHKDIVEMLFTQPNIELN-------QQN 137 (222)
T ss_dssp ESCHHHHHHHHTCHHHHHHHHHTTCC-------TTCCCTTSCC-HHHHHHHTTCHHHHHHHTTSTTCCCC-------CCC
T ss_pred cccccccccccCcHHHHHHHHhCCCC-------ccccCCCCCC-HHHHHHHcCCHHHHHHHHcCCCCCcc-------ccC
Confidence 57888888888888888888887776 6667778888 88888888888888888887 77766 555
Q ss_pred cCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHh
Q 039985 180 WAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITK 239 (357)
Q Consensus 180 ~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~ 239 (357)
..|+||||+|+..|+.++|++|+++|+++. .+|..|+||||+|+..|+.++++.|+.
T Consensus 138 ~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~---~~~~~g~t~l~~A~~~~~~~~l~~l~~ 194 (222)
T 3ehr_A 138 KLGDTALHAAAWKGYADIVQLLLAKGARTD---LRNIEKKLAFDMATNAACASLLKKKQG 194 (222)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHHHHHTCCSC---CCCTTSCCHHHHCCSHHHHHHHC----
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCc---cccCCCCCHHHHhcchhHHHHHHHHhc
Confidence 568888888888888888888888888877 778888888888888888888887766
|
| >3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A | Back alignment and structure |
|---|
Probab=99.90 E-value=2.6e-24 Score=193.90 Aligned_cols=129 Identities=9% Similarity=0.049 Sum_probs=116.3
Q ss_pred CCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCC
Q 039985 100 ANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKN 179 (357)
Q Consensus 100 ~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~ 179 (357)
.|.||||+|+..|+.++++.|++ +.+ .+..|..|.| |||+|+..|+.++|++|+++|++++ .++
T Consensus 44 ~g~t~L~~A~~~g~~~~v~~Ll~-~~~-------~~~~d~~g~t-~L~~A~~~g~~~~v~~Ll~~ga~~~-------~~~ 107 (244)
T 3ui2_A 44 EYETPWWTAARKADEQALSQLLE-DRD-------VDAVDENGRT-ALLFVAGLGSDKCVRLLAEAGADLD-------HRD 107 (244)
T ss_dssp HHHHHHHHHHTTTCHHHHHHTTT-TCC-------TTCBCTTSCB-HHHHHHHHTCHHHHHHHHHTTCCTT-------CCC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHc-CCC-------CCCcCCCCCC-HHHHHHHCCCHHHHHHHHHcCCCCC-------cCC
Confidence 48899999999999999999999 776 7778999999 9999999999999999999999987 333
Q ss_pred -cCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCc
Q 039985 180 -WAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYT 258 (357)
Q Consensus 180 -~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~T 258 (357)
..|+||||+||..|+.++|++|+++|++++ .+|..|+||||+|+..+ .+..+.|
T Consensus 108 ~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~---~~d~~g~t~l~~A~~~~----------------------~~~~~~~ 162 (244)
T 3ui2_A 108 MRGGLTALHMAAGYVRPEVVEALVELGADIE---VEDERGLTALELAREIL----------------------KTTPKGN 162 (244)
T ss_dssp SSSCCCHHHHHHHTTCHHHHHHHHHTTCCTT---CCCTTCCCHHHHHHHHH----------------------TTCCCSS
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC---CCCCCCCcHHHHHHHHH----------------------hccCCCC
Confidence 459999999999999999999999999998 99999999999998622 1256899
Q ss_pred HHHHHHHcCCC
Q 039985 259 LLHHVADMKHY 269 (357)
Q Consensus 259 pLh~Aa~~g~~ 269 (357)
|||+|+..|+.
T Consensus 163 ~l~~a~~~g~~ 173 (244)
T 3ui2_A 163 PMQFGRRIGLE 173 (244)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHcChH
Confidence 99999999973
|
| >3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.6e-24 Score=187.54 Aligned_cols=121 Identities=13% Similarity=0.078 Sum_probs=112.2
Q ss_pred CCCHHHHHHhcCCH----HHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCc------HHHHHHHHHcCCCCCC
Q 039985 101 NISTISLGLGKGNM----LKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSA------AELVELFVKKDCTIKG 170 (357)
Q Consensus 101 g~t~Lh~A~~~g~~----~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~------~~iv~~Ll~~g~~~~~ 170 (357)
|.||||+|+.+|+. +++++|++.|++ ++..|..|+| |||+|+..|+ .++|++|+++|++++
T Consensus 38 g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gad-------vn~~d~~g~T-pLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin- 108 (186)
T 3t8k_A 38 KSNILYDVLRNNNDEARYKISMFLINKGAD-------IKSRTKEGTT-LFFPLFQGGGNDITGTTELCKIFLEKGADIT- 108 (186)
T ss_dssp TTTHHHHHTTCSCHHHHHHHHHHHHHTTCC-------SSCCCTTCCC-THHHHHHHCTTCHHHHHHHHHHHHHTTCCSS-
T ss_pred CCCHHHHHHHcCCcchHHHHHHHHHHCCCC-------CCCCCCCCCc-HHHHHHHcCCcchhhHHHHHHHHHHCCCCCC-
Confidence 99999999999986 489999999999 8889999999 9999999987 689999999999998
Q ss_pred CCCCccCCCcCcc-hHHHHHHHCC-----CHHHHHHHHh-hCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHh
Q 039985 171 VPNHKKDKNWAIR-LTLLFAASNG-----ITEILKEIIH-QHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITK 239 (357)
Q Consensus 171 ~~~~~~~~~~~G~-TpLh~Aa~~G-----~~~iv~~Ll~-~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~ 239 (357)
.+|..|. ||||+|+..| +.+++++|++ +|++++ .+|..|+||||+|+..|+.++|++|+.
T Consensus 109 ------~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~---~~d~~G~TpL~~A~~~~~~~~v~~L~~ 175 (186)
T 3t8k_A 109 ------ALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLL---IKDKWGLTALEFVKRCQKPIALKMMED 175 (186)
T ss_dssp ------SCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTT---CCCTTSCCHHHHHHTTTCHHHHHHHHH
T ss_pred ------ccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCc---ccCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 6777799 9999999955 4579999999 999998 999999999999999999999999987
|
| >1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 | Back alignment and structure |
|---|
Probab=99.90 E-value=2e-23 Score=166.92 Aligned_cols=114 Identities=23% Similarity=0.282 Sum_probs=106.9
Q ss_pred CCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCC
Q 039985 140 KGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQ 219 (357)
Q Consensus 140 ~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~ 219 (357)
+|.| |||+|+..|+.+++++|+++|++++ .++..|.||||+|+..|+.+++++|+++|+++. .+|..|+
T Consensus 1 ~g~t-~L~~A~~~~~~~~v~~Ll~~~~~~~-------~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~---~~~~~g~ 69 (126)
T 1n0r_A 1 NGRT-PLHLAARNGHLEVVKLLLEAGADVN-------AKDKNGRTPLHLAARNGHLEVVKLLLEAGADVN---AKDKNGR 69 (126)
T ss_dssp CCCC-HHHHHHHHTCHHHHHHHHHHTCCTT-------CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT---CCCTTSC
T ss_pred CCcc-HHHHHHHcCcHHHHHHHHHcCCCCC-------CcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCc---ccCCCCC
Confidence 4889 9999999999999999999999887 555669999999999999999999999999998 9999999
Q ss_pred hHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcHHHHHHHcCCC
Q 039985 220 NILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTLLHHVADMKHY 269 (357)
Q Consensus 220 TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~ 269 (357)
||||+|+..|+.+++++|++ .+.+++.+|..|.||||+|+..|+.
T Consensus 70 t~l~~A~~~~~~~~~~~Ll~-----~g~~~~~~~~~g~t~l~~A~~~~~~ 114 (126)
T 1n0r_A 70 TPLHLAARNGHLEVVKLLLE-----AGADVNAKDKNGRTPLHLAARNGHL 114 (126)
T ss_dssp CHHHHHHHTTCHHHHHHHHH-----TTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred cHHHHHHHcChHHHHHHHHH-----cCCCCcccCCCCCCHHHHHHHcCcH
Confidence 99999999999999999998 6789999999999999999999973
|
| >2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.90 E-value=3.9e-24 Score=191.09 Aligned_cols=134 Identities=10% Similarity=-0.049 Sum_probs=109.3
Q ss_pred HHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCcCcchHHHHHHHCCCHH
Q 039985 117 AKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNWAIRLTLLFAASNGITE 196 (357)
Q Consensus 117 vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~G~TpLh~Aa~~G~~~ 196 (357)
++.|++.+.... ..+..+..|.| |||+|+..|+.++|++|++.|++++ .+|..|+||||+||..|+.+
T Consensus 1 v~~ll~~~~~~~----~~~~~~~~~~t-~L~~A~~~g~~~~v~~Ll~~g~~~~-------~~d~~g~tpLh~A~~~g~~~ 68 (229)
T 2vge_A 1 MRSVLRKAGSPR----KARRARLNPLV-LLLDAALTGELEVVQQAVKEMNDPS-------QPNEEGITALHNAICGANYS 68 (229)
T ss_dssp ---------CCC----CCCCTTSCHHH-HHHHHHHHTCHHHHHHHHHHSSCTT-------CCCTTSCCHHHHHHHTTCHH
T ss_pred CeehhccCCCCc----cccccccchhH-HHHHHHHcCCHHHHHHHHhcCCCCC-------CCCCCCCCHHHHHHHcCCHH
Confidence 356777766500 02234556677 9999999999999999999999887 56667999999999999999
Q ss_pred HHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCcccccccc-CCCCcHHHHH--HHcCCCC
Q 039985 197 ILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRID-KKGYTLLHHV--ADMKHYK 270 (357)
Q Consensus 197 iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d-~~G~TpLh~A--a~~g~~~ 270 (357)
+|++|+++|++++ .+|..|+||||+|+..|+.+++++|++ .+++++.+| .+|+||||+| +..|+.+
T Consensus 69 ~v~~Ll~~ga~~n---~~d~~g~tpLh~A~~~g~~~~v~~Ll~-----~ga~~~~~~~~~g~tpL~~A~a~~~~~~~ 137 (229)
T 2vge_A 69 IVDFLITAGANVN---SPDSHGWTPLHCAASCNDTVICMALVQ-----HGAAIFATTLSDGATAFEKCDPYREGYAD 137 (229)
T ss_dssp HHHHHHHTTCCTT---CCCTTCCCHHHHHHHTTCHHHHHHHHT-----TTCCTTCCCSSTTCCTGGGCCTTSTTHHH
T ss_pred HHHHHHHCCCCCC---CCCCCCCCHHHHHHHcCCHHHHHHHHH-----cCCCcccccCCCCCCHHHHHHHHhcChHH
Confidence 9999999999998 999999999999999999999999987 688999987 6999999999 8887643
|
| >3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A | Back alignment and structure |
|---|
Probab=99.90 E-value=5.5e-24 Score=183.00 Aligned_cols=128 Identities=9% Similarity=0.060 Sum_probs=115.3
Q ss_pred CCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCC
Q 039985 100 ANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKN 179 (357)
Q Consensus 100 ~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~ 179 (357)
.|.||||+|+..|+.++++.|++ +.+ .+..|..|.| |||+|+..|+.+++++|+++|++++ .++
T Consensus 43 ~g~t~L~~A~~~g~~~~v~~Ll~-~~~-------~~~~d~~g~t-~L~~A~~~~~~~~v~~Ll~~ga~~~-------~~~ 106 (183)
T 3deo_A 43 EYETPWWTAARKADEQALSQLLE-DRD-------VDAVDENGRT-ALLFVAGLGSDKCVRLLAEAGADLD-------HRD 106 (183)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHTT-TSC-------TTCCCTTSCC-HHHHHHHHTCHHHHHHHHHTTCCTT-------CCC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHh-cCC-------CCCcCCCCCC-HHHHHHHcCCHHHHHHHHHcCCCCC-------cCC
Confidence 48899999999999999999999 776 6778999999 9999999999999999999999987 333
Q ss_pred -cCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCc
Q 039985 180 -WAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYT 258 (357)
Q Consensus 180 -~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~T 258 (357)
..|+||||+|+..|+.+++++|+++|+++. .+|..|+||||+|+..++. ..+.|
T Consensus 107 ~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~---~~d~~g~tpl~~A~~~~~~----------------------~~~~~ 161 (183)
T 3deo_A 107 MRGGLTALHMAAGYVRPEVVEALVELGADIE---VEDERGLTALELAREILKT----------------------TPKGN 161 (183)
T ss_dssp SSSSCCHHHHHHHTTCHHHHHHHHHHTCCTT---CCCTTSCCHHHHHHHHHHT----------------------CCCCS
T ss_pred CCCCCCHHHHHHhcCcHHHHHHHHHcCCCCc---CCCCCCCCHHHHHHHhccC----------------------ccccc
Confidence 459999999999999999999999999998 9999999999999874321 35789
Q ss_pred HHHHHHHcCC
Q 039985 259 LLHHVADMKH 268 (357)
Q Consensus 259 pLh~Aa~~g~ 268 (357)
||++|+..|+
T Consensus 162 ~l~~a~~~~~ 171 (183)
T 3deo_A 162 PMQFGRRIGL 171 (183)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHcCH
Confidence 9999999886
|
| >3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A | Back alignment and structure |
|---|
Probab=99.89 E-value=9.5e-24 Score=186.77 Aligned_cols=118 Identities=9% Similarity=0.063 Sum_probs=109.5
Q ss_pred hhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCcCcchHHHHHHHCCCHHHHHHHHhh-CCCcccccc
Q 039985 135 KDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNWAIRLTLLFAASNGITEILKEIIHQ-HPQAILLDN 213 (357)
Q Consensus 135 ~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~-~~~~~~~~~ 213 (357)
...+..|.| |||+|+..|+.++|++|++.|++++ .+|..|+||||+||..|+.++|++|+++ |++++ .
T Consensus 67 ~~~~~~g~t-~L~~A~~~g~~~~v~~Ll~~g~~~~-------~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~---~ 135 (222)
T 3ehr_A 67 AEQAESIDN-PLHEAAKRGNLSWLRECLDNRVGVN-------GLDKAGSTALYWACHGGHKDIVEMLFTQPNIELN---Q 135 (222)
T ss_dssp HHHEEEESC-HHHHHHHHTCHHHHHHHHHTTCCTT-------CCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCC---C
T ss_pred ccccccccc-ccccccccCcHHHHHHHHhCCCCcc-------ccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCcc---c
Confidence 345778899 9999999999999999999999987 5666799999999999999999999999 88888 9
Q ss_pred cCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcHHHHHHHcCC
Q 039985 214 LNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTLLHHVADMKH 268 (357)
Q Consensus 214 ~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~ 268 (357)
+|..|+||||+|+..|+.+++++|++ .+++++.+|.+|.||||+|+..|+
T Consensus 136 ~d~~g~tpL~~A~~~~~~~~v~~Ll~-----~ga~~~~~~~~g~t~l~~A~~~~~ 185 (222)
T 3ehr_A 136 QNKLGDTALHAAAWKGYADIVQLLLA-----KGARTDLRNIEKKLAFDMATNAAC 185 (222)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHHHH-----HTCCSCCCCTTSCCHHHHCCSHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHH-----cCCCCccccCCCCCHHHHhcchhH
Confidence 99999999999999999999999998 678999999999999999998775
|
| >3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A | Back alignment and structure |
|---|
Probab=99.89 E-value=5.6e-23 Score=196.14 Aligned_cols=149 Identities=11% Similarity=0.039 Sum_probs=115.6
Q ss_pred CCCCHHHHHHhc-CCHHHHHHHHhcCcchhHHHhhhhhcC--CCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCcc
Q 039985 100 ANISTISLGLGK-GNMLKAKKLVDFSAGELDELLLKKDCT--NKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKK 176 (357)
Q Consensus 100 ~g~t~Lh~A~~~-g~~~~vk~Ll~~~~~~~~~~l~~~~~~--~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~ 176 (357)
.+.|+||.|+.. |+.++++.|++.+++ .+..+ ..|.| |||+|+..|+.++|++|+++|++++
T Consensus 198 ~~~t~L~~Aa~~~g~~~~v~~LL~~Gad-------vn~~~~~~~g~T-pLh~Aa~~g~~~iv~~LL~~Gadvn------- 262 (368)
T 3jue_A 198 HPGALLFRASGHPPSLPTMADALAHGAD-------VNWVNGGQDNAT-PLIQATAANSLLACEFLLQNGANVN------- 262 (368)
T ss_dssp CHHHHHHHHTSSSCCHHHHHHHHHTTCC-------TTCCCTTTTCCC-HHHHHHHTTCHHHHHHHHHTTCCTT-------
T ss_pred CCCcHHHHHHHccCCHHHHHHHHHcCCC-------CCccccccCCCC-HHHHHHHCCCHHHHHHHHHcCCCCC-------
Confidence 456899999999 999999999999998 56666 89999 9999999999999999999999988
Q ss_pred CCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCC
Q 039985 177 DKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKG 256 (357)
Q Consensus 177 ~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G 256 (357)
.+|..|+||||+|+..|+.++|++|+++|+++. .+|..|+||||+|+..|+.+++++|+.... ........+..+
T Consensus 263 ~~d~~G~TpLh~A~~~g~~~~v~~LL~~Gad~~---~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~--~~~~~~~~~~~~ 337 (368)
T 3jue_A 263 QADSAGRGPLHHATILGHTGLACLFLKRGADLG---ARDSEGRDPLTIAMETANADIVTLLRLAKM--REAEAAQGQAGD 337 (368)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT---CCCTTSCCHHHHHHHTTCHHHHHHHHHHHC--------------
T ss_pred CCCCCCCCHHHHHHHcCcHHHHHHHHHCcCCCC---CcCCCCCCHHHHHHHCCCHHHHHHHHHcCC--CcccccccCCCC
Confidence 566679999999999999999999999999998 999999999999999999999999987532 344555667788
Q ss_pred CcHHHHHHHcCC
Q 039985 257 YTLLHHVADMKH 268 (357)
Q Consensus 257 ~TpLh~Aa~~g~ 268 (357)
.|+|+++.....
T Consensus 338 ~t~l~i~~~~~~ 349 (368)
T 3jue_A 338 ETYLDIFRDFSL 349 (368)
T ss_dssp ------------
T ss_pred CCHHHHHHHHHh
Confidence 999988876653
|
| >1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 | Back alignment and structure |
|---|
Probab=99.88 E-value=9.1e-23 Score=187.55 Aligned_cols=127 Identities=13% Similarity=0.143 Sum_probs=113.6
Q ss_pred CCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhc---CcHHHHHHHHHcCCCCCCCCCCccCC
Q 039985 102 ISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDF---SAAELVELFVKKDCTIKGVPNHKKDK 178 (357)
Q Consensus 102 ~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~---g~~~iv~~Ll~~g~~~~~~~~~~~~~ 178 (357)
.++||.|+..|+.+.++.+++.+.+ ++..+.....+..|.| |||+|+.. |+.++|++|+++|++++ .+
T Consensus 131 l~~l~~a~~~~d~~~~~~ll~~g~~-~~~~~~l~~~~~~g~t-~Lh~A~~~~~~~~~~~v~~Ll~~ga~in-------~~ 201 (278)
T 1dcq_A 131 LHSLCEAVKTRDIFGLLQAYADGVD-LTEKIPLANGHEPDET-ALHLAVRSVDRTSLHIVDFLVQNSGNLD-------KQ 201 (278)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCC-TTSBCCCSSCSSTTCB-HHHHHHHHCCTTTHHHHHHHHHHCSCTT-------CC
T ss_pred hhhhhhHhhhcccHHHHHHHHhhcc-hhhhccccccccCCCC-cchHHHHhcccchHHHHHHHHHCCCCcc-------cc
Confidence 4689999999999999999999887 1111113345789999 99999999 89999999999999988 66
Q ss_pred CcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhh
Q 039985 179 NWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKE 240 (357)
Q Consensus 179 ~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~ 240 (357)
|..|+||||+||..|+.++|++|+++|++++ .+|..|+||||+|+..|+.+++++|++.
T Consensus 202 d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~---~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ 260 (278)
T 1dcq_A 202 TGKGSTALHYCCLTDNAECLKLLLRGKASIE---IANESGETPLDIAKRLKHEHCEELLTQA 260 (278)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT---CCCTTSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC---CccCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 6679999999999999999999999999998 9999999999999999999999999885
|
| >1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 | Back alignment and structure |
|---|
Probab=99.86 E-value=1.6e-21 Score=148.62 Aligned_cols=90 Identities=20% Similarity=0.290 Sum_probs=83.8
Q ss_pred CCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCC
Q 039985 140 KGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQ 219 (357)
Q Consensus 140 ~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~ 219 (357)
+|+| |||+|+..|+.+++++|+++|++++ .+|..|+||||+|+..|+.+++++|+++|+++. .+|..|+
T Consensus 1 ~g~t-~L~~A~~~~~~~~v~~Ll~~g~~~n-------~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~---~~d~~g~ 69 (93)
T 1n0q_A 1 NGRT-PLHLAARNGHLEVVKLLLEAGADVN-------AKDKNGRTPLHLAARNGHLEVVKLLLEAGADVN---AKDKNGR 69 (93)
T ss_dssp --CC-HHHHHHHHTCHHHHHHHHHTTCCTT-------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT---CCCTTSC
T ss_pred CCCc-HHHHHHHcCCHHHHHHHHHcCCCCc-------ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC---ccCCCCC
Confidence 4788 9999999999999999999999987 666679999999999999999999999999998 9999999
Q ss_pred hHHHHHHHcCCHHHHHHHHhh
Q 039985 220 NILHVAVKRRQYKVFELITKE 240 (357)
Q Consensus 220 TpLh~A~~~g~~~iv~~Ll~~ 240 (357)
||||+|+..|+.+++++|++.
T Consensus 70 t~l~~A~~~~~~~~~~~Ll~~ 90 (93)
T 1n0q_A 70 TPLHLAARNGHLEVVKLLLEA 90 (93)
T ss_dssp CHHHHHHHTTCHHHHHHHHHT
T ss_pred CHHHHHHHcCCHHHHHHHHHc
Confidence 999999999999999999873
|
| >2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.86 E-value=5.9e-22 Score=156.83 Aligned_cols=107 Identities=17% Similarity=0.145 Sum_probs=99.6
Q ss_pred cCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCC
Q 039985 137 CTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNE 216 (357)
Q Consensus 137 ~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~ 216 (357)
.|.+|.| |||+|+..|+.+++++|+++|++++ .+|..|.||||+|+..|+.+++++|+++|+++. .+|.
T Consensus 5 ~d~~g~t-~L~~A~~~~~~~~~~~Ll~~g~~~~-------~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~---~~d~ 73 (115)
T 2l6b_A 5 GSKDGNT-PLHNAAKNGHAEEVKKLLSKGADVN-------ARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVN---ARSK 73 (115)
T ss_dssp CSCSSCC-HHHHHHHHTCHHHHHHHTTTTCCSS-------CCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTT---CCCT
T ss_pred cCCCCCC-HHHHHHHcCCHHHHHHHHHcCCCCC-------CcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCc---ccCC
Confidence 6889999 9999999999999999999999887 556669999999999999999999999999998 9999
Q ss_pred CCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcH
Q 039985 217 KEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTL 259 (357)
Q Consensus 217 ~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~Tp 259 (357)
.|+||||+|+..|+.+++++|++ .++++|.++..|.||
T Consensus 74 ~g~tpl~~A~~~~~~~~~~~Ll~-----~ga~~n~~~~~~~~~ 111 (115)
T 2l6b_A 74 DGNTPEHLAKKNGHHEIVKLLDA-----KGADVNARSWGSSHH 111 (115)
T ss_dssp TCCCTTHHHHTTTCHHHHHHHHT-----TSSSHHHHSCCCC--
T ss_pred CCCCHHHHHHHCCCHHHHHHHHH-----cCCCCCcCCcccccc
Confidence 99999999999999999999987 789999999999998
|
| >1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 | Back alignment and structure |
|---|
Probab=99.86 E-value=3e-21 Score=147.10 Aligned_cols=92 Identities=20% Similarity=0.241 Sum_probs=86.3
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCc
Q 039985 101 NISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNW 180 (357)
Q Consensus 101 g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~ 180 (357)
|.||||+|+..|+.+++++|++.+++ .+..|..|.| |||+|+..|+.+++++|+++|++++ .+|.
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~g~~-------~n~~d~~g~t-~L~~A~~~~~~~~v~~Ll~~ga~~~-------~~d~ 66 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLEAGAD-------VNAKDKNGRT-PLHLAARNGHLEVVKLLLEAGADVN-------AKDK 66 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCC-------TTCCCTTSCC-HHHHHHHTTCHHHHHHHHHTTCCTT-------CCCT
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCC-------CcccCCCCCC-HHHHHHHcCCHHHHHHHHHcCCCCC-------ccCC
Confidence 88999999999999999999999998 7889999999 9999999999999999999999987 5666
Q ss_pred CcchHHHHHHHCCCHHHHHHHHhhCCC
Q 039985 181 AIRLTLLFAASNGITEILKEIIHQHPQ 207 (357)
Q Consensus 181 ~G~TpLh~Aa~~G~~~iv~~Ll~~~~~ 207 (357)
.|.||||+|+..|+.+++++|+++|++
T Consensus 67 ~g~t~l~~A~~~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 67 NGRTPLHLAARNGHLEVVKLLLEAGAY 93 (93)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 799999999999999999999999975
|
| >2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.86 E-value=2.5e-21 Score=180.01 Aligned_cols=115 Identities=15% Similarity=0.036 Sum_probs=104.0
Q ss_pred HHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCcCcchHHHHHHHC---CCHHHHHHHHhhCCCcccccccCCCCChH
Q 039985 145 KAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNWAIRLTLLFAASN---GITEILKEIIHQHPQAILLDNLNEKEQNI 221 (357)
Q Consensus 145 pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~G~TpLh~Aa~~---G~~~iv~~Ll~~~~~~~~~~~~d~~G~Tp 221 (357)
+|+.|+..|+.+.|+.|++.|++++...... ..+..|.||||+|+.. |+.+++++|+++|++++ .+|..|+||
T Consensus 154 ~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~-~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn---~~d~~G~Tp 229 (301)
T 2b0o_E 154 RLWTAICNRDLLSVLEAFANGQDFGQPLPGP-DAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLD---AKAADGNTA 229 (301)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTSCEECS-SSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTT---CCCTTCCCH
T ss_pred HHhhhhhccCHHHHHHHHhcCCcccccCCCc-ccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCC---CCCCCCCCH
Confidence 7999999999999999999999987321110 1456699999999997 89999999999999998 999999999
Q ss_pred HHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcHHHHHHHcCC
Q 039985 222 LHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTLLHHVADMKH 268 (357)
Q Consensus 222 Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~ 268 (357)
||+|+..|+.+++++|++ .+++++.+|.+|.||||+|+..|+
T Consensus 230 Lh~A~~~g~~~~v~~Ll~-----~gad~~~~d~~G~TpL~~A~~~~~ 271 (301)
T 2b0o_E 230 LHYAALYNQPDCLKLLLK-----GRALVGTVNEAGETALDIARKKHH 271 (301)
T ss_dssp HHHHHHTTCHHHHHHHHH-----TTCCCSCCCTTSCCHHHHHHHHTC
T ss_pred HHHHHHcCCHHHHHHHHH-----cCCCCCCcCCCCCCHHHHHHHcCC
Confidence 999999999999999998 688999999999999999999997
|
| >3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A | Back alignment and structure |
|---|
Probab=99.85 E-value=5.3e-21 Score=182.47 Aligned_cols=145 Identities=11% Similarity=-0.010 Sum_probs=108.0
Q ss_pred CCCcHHHHHHHhc-CcHHHHHHHHHcCCCCCCCCCCccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCC
Q 039985 140 KGNMIKAKKFVDF-SAAELVELFVKKDCTIKGVPNHKKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKE 218 (357)
Q Consensus 140 ~g~t~pLh~A~~~-g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G 218 (357)
.+.| +||+|+.. |+.+++++|+++|++++... .+..|.||||+||..|+.++|++|+++|++++ .+|..|
T Consensus 198 ~~~t-~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~-----~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn---~~d~~G 268 (368)
T 3jue_A 198 HPGA-LLFRASGHPPSLPTMADALAHGADVNWVN-----GGQDNATPLIQATAANSLLACEFLLQNGANVN---QADSAG 268 (368)
T ss_dssp CHHH-HHHHHTSSSCCHHHHHHHHHTTCCTTCCC-----TTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT---CCCTTS
T ss_pred CCCc-HHHHHHHccCCHHHHHHHHHcCCCCCccc-----cccCCCCHHHHHHHCCCHHHHHHHHHcCCCCC---CCCCCC
Confidence 4456 99999999 99999999999999987322 11459999999999999999999999999998 999999
Q ss_pred ChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcHHHHHHHcCCCCCCCCCCChhHHHHHhhhHHHHHHhcc--
Q 039985 219 QNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTLLHHVADMKHYKEGTRPGPVLQFQEELQLFEHVKEIMP-- 296 (357)
Q Consensus 219 ~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~~~~~t~L~la~~l~~~~~v~~ll~-- 296 (357)
+||||+|+..|+.+++++|++ .+++++.+|.+|.||||+|+..|+.+ .++.|+.
T Consensus 269 ~TpLh~A~~~g~~~~v~~LL~-----~Gad~~~~d~~G~TpL~~A~~~g~~~-------------------iv~lLl~~~ 324 (368)
T 3jue_A 269 RGPLHHATILGHTGLACLFLK-----RGADLGARDSEGRDPLTIAMETANAD-------------------IVTLLRLAK 324 (368)
T ss_dssp CCHHHHHHHHTCHHHHHHHHH-----TTCCTTCCCTTSCCHHHHHHHTTCHH-------------------HHHHHHHHH
T ss_pred CCHHHHHHHcCcHHHHHHHHH-----CcCCCCCcCCCCCCHHHHHHHCCCHH-------------------HHHHHHHcC
Confidence 999999999999999999998 68899999999999999999999732 2222221
Q ss_pred --CcccccccccCCCCHHHHHhhh
Q 039985 297 --RHYAMHRDEKNKMTASDLFNLT 318 (357)
Q Consensus 297 --~~~~~~~n~~g~~Tp~dl~~~~ 318 (357)
.......+..+. |+++++..-
T Consensus 325 ~~~~~~~~~~~~~~-t~l~i~~~~ 347 (368)
T 3jue_A 325 MREAEAAQGQAGDE-TYLDIFRDF 347 (368)
T ss_dssp C-----------------------
T ss_pred CCcccccccCCCCC-CHHHHHHHH
Confidence 123345566788 999988643
|
| >2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 | Back alignment and structure |
|---|
Probab=99.85 E-value=2.1e-22 Score=192.72 Aligned_cols=169 Identities=10% Similarity=-0.026 Sum_probs=127.3
Q ss_pred CCHHHHHHh-cCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCc
Q 039985 102 ISTISLGLG-KGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNW 180 (357)
Q Consensus 102 ~t~Lh~A~~-~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~ 180 (357)
.+++++|+. .++.++++++++.+.. +.| |||+|+..|+.++|++|+++|+..... . ..+.
T Consensus 66 ll~~~~a~~~~~~~~~~~~l~~~g~~--------------~~T-~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~-~---~~~~ 126 (376)
T 2aja_A 66 LLCLYYAHYNRNAKQLWSDAHKKGIK--------------SEV-ICFVAAITGCSSALDTLCLLLTSDEIV-K---VIQA 126 (376)
T ss_dssp HHHHHHHHTTTTCTTHHHHHHHHTCC--------------HHH-HHHHHHHHCCHHHHHHHTTC--CCSSC-C-----CH
T ss_pred HHHHHHHHhcCCCHHHHHHHHHcCCC--------------cCC-HHHHHHHcCCHHHHHHHHHcCCcHHHH-H---Hhcc
Confidence 367888776 5778888888877665 346 999999999999999999998832211 1 2334
Q ss_pred CcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCcccccc--ccCCCCc
Q 039985 181 AIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASR--IDKKGYT 258 (357)
Q Consensus 181 ~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~--~d~~G~T 258 (357)
.|.||||+||+.|+.++|++|+++|++....+..+.+ +||||+||.+|+.++|++|++ .+++++. +|.+|.|
T Consensus 127 ~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~-----~ga~~~~~~~d~~g~T 200 (376)
T 2aja_A 127 ENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCE-----LAPTEATAMIQAENYY 200 (376)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHH-----SCGGGHHHHHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHH-----cCCccchhccCCCCCC
Confidence 5899999999999999999999999863200133333 999999999999999999998 6778777 8999999
Q ss_pred HHHHHH-HcCCCCCC----C---CCCChhHHHHHhhhHHHHHHhc
Q 039985 259 LLHHVA-DMKHYKEG----T---RPGPVLQFQEELQLFEHVKEIM 295 (357)
Q Consensus 259 pLh~Aa-~~g~~~~~----~---~~~t~L~la~~l~~~~~v~~ll 295 (357)
|||+|+ ..|+.+.. . .+.|||+.|...+..+.++.++
T Consensus 201 pL~~Aa~~~G~~eiv~~Ll~~ga~~~taL~~Aa~~g~~evv~lL~ 245 (376)
T 2aja_A 201 AFRWAAVGRGHHNVINFLLDCPVMLAYAEIHEFEYGEKYVNPFIA 245 (376)
T ss_dssp HHHHHHSTTCCHHHHHHHTTSHHHHHHHHHCTTTTTTTTHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHhCCCccchHHHHHHHCCCHHHHHHHH
Confidence 999999 99986521 1 1226777777666666555555
|
| >3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E* | Back alignment and structure |
|---|
Probab=99.84 E-value=2.1e-20 Score=185.50 Aligned_cols=116 Identities=15% Similarity=0.038 Sum_probs=105.4
Q ss_pred HHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCcCcchHHHHHHH---CCCHHHHHHHHhhCCCcccccccCCCCChH
Q 039985 145 KAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNWAIRLTLLFAAS---NGITEILKEIIHQHPQAILLDNLNEKEQNI 221 (357)
Q Consensus 145 pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~G~TpLh~Aa~---~G~~~iv~~Ll~~~~~~~~~~~~d~~G~Tp 221 (357)
.||.|+..|+.++|+.||+.|++++...... ..+..|.||||+||. .|+.++|++|+++|++++ .+|..|+||
T Consensus 135 ~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~-~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn---~~d~~g~Tp 210 (497)
T 3lvq_E 135 RLWTAICNRDLLSVLEAFANGQDFGQPLPGP-DAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLD---AKAADGNTA 210 (497)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCSSSCBCCS-SSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTT---CCCSSSCCH
T ss_pred HHHHHHhccCHHHHHHHHhhcccccCCCCCc-ccccccchHHHHHHHhcccccHHHHHHHHHcCCCCC---ccCCCCCcH
Confidence 8999999999999999999999987432211 346679999999966 999999999999999998 999999999
Q ss_pred HHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcHHHHHHHcCCC
Q 039985 222 LHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTLLHHVADMKHY 269 (357)
Q Consensus 222 Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~ 269 (357)
||+|+..|+.++|++|++ .+++++.+|.+|+||||+|+..|+.
T Consensus 211 Lh~A~~~g~~~~v~~Ll~-----~ga~~~~~d~~g~tpl~~A~~~~~~ 253 (497)
T 3lvq_E 211 LHYAALYNQPDCLKLLLK-----GRALVGTVNEAGETALDIARKKHHK 253 (497)
T ss_dssp HHHHTTTTCHHHHHHHHH-----TCCCCSCCCTTCCCHHHHHHHTTCH
T ss_pred HHHHHHcCCHHHHHHHHH-----cCCCCCCcCCCCCCHHHHHHHcCCH
Confidence 999999999999999998 7899999999999999999999984
|
| >1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 | Back alignment and structure |
|---|
Probab=99.83 E-value=4.1e-20 Score=169.79 Aligned_cols=162 Identities=11% Similarity=0.019 Sum_probs=126.3
Q ss_pred CCCCCCHHHHHHhcCCHHHHHHHHhcCcc----------hhH---H----HhhhhhcCCC-------CCcHHHHHHHhcC
Q 039985 98 SPANISTISLGLGKGNMLKAKKLVDFSAG----------ELD---E----LLLKKDCTNK-------GNMIKAKKFVDFS 153 (357)
Q Consensus 98 ~~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~----------~~~---~----~l~~~~~~~~-------g~t~pLh~A~~~g 153 (357)
+.++.+.|+.+...||..+.+.+...-+. ... . .......... ..+ +|+.|+..|
T Consensus 63 d~~~~~~l~~~~~~GN~~~n~i~e~~l~~~~~~kP~~~s~~~~~~~fI~aKYl~~~f~~~~~~~~~~~l~-~l~~a~~~~ 141 (278)
T 1dcq_A 63 DVLGTSELLLAKNIGNAGFNEIMECCLPSEDPVKPNPGSDMIARKDYITAKYMERRYARKKHADTAAKLH-SLCEAVKTR 141 (278)
T ss_dssp SCCCGGGGHHHHHSCHHHHHHHHTTTCCSSSCCSCCTTCCHHHHHHHHHHHHTTCTTSCCCSSSHHHHHH-HHHHHHHTT
T ss_pred CCCCHHHHHHHHHcCcHHHHHHHHhhCChhhcCCCCCCCCHHHHHHHHHHHHHHhhcccccccccchhhh-hhhhHhhhc
Confidence 34577899999999998775555322111 000 0 0000011111 124 899999999
Q ss_pred cHHHHHHHHHcCCCCCCCCCCccCCCcCcchHHHHHHHC---CCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCC
Q 039985 154 AAELVELFVKKDCTIKGVPNHKKDKNWAIRLTLLFAASN---GITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQ 230 (357)
Q Consensus 154 ~~~iv~~Ll~~g~~~~~~~~~~~~~~~~G~TpLh~Aa~~---G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~ 230 (357)
+.+.++.+++.|+++...... +..+..|.||||+||.. |+.+++++|+++|++++ .+|..|+||||+|+..|+
T Consensus 142 d~~~~~~ll~~g~~~~~~~~l-~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in---~~d~~g~TpLh~A~~~g~ 217 (278)
T 1dcq_A 142 DIFGLLQAYADGVDLTEKIPL-ANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLD---KQTGKGSTALHYCCLTDN 217 (278)
T ss_dssp CHHHHHHHHHTTCCTTSBCCC-SSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTT---CCCTTCCCHHHHHHHTTC
T ss_pred ccHHHHHHHHhhcchhhhccc-cccccCCCCcchHHHHhcccchHHHHHHHHHCCCCcc---ccCCCCCCHHHHHHHcCC
Confidence 999999999999986533211 13456699999999999 99999999999999998 999999999999999999
Q ss_pred HHHHHHHHhhhccCCccccccccCCCCcHHHHHHHcCCC
Q 039985 231 YKVFELITKEMQLSVPKWASRIDKKGYTLLHHVADMKHY 269 (357)
Q Consensus 231 ~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~ 269 (357)
.++|++|++ .+++++.+|.+|.||||+|+..|+.
T Consensus 218 ~~~v~~Ll~-----~gad~~~~d~~g~tpL~~A~~~~~~ 251 (278)
T 1dcq_A 218 AECLKLLLR-----GKASIEIANESGETPLDIAKRLKHE 251 (278)
T ss_dssp HHHHHHHHH-----TTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred HHHHHHHHH-----cCCCCCCccCCCCCHHHHHHHcCCH
Confidence 999999998 7889999999999999999999973
|
| >2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.83 E-value=8e-21 Score=150.26 Aligned_cols=108 Identities=18% Similarity=0.137 Sum_probs=97.8
Q ss_pred CCCCCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCcc
Q 039985 97 TSPANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKK 176 (357)
Q Consensus 97 ~~~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~ 176 (357)
.+..|.||||+|+..|+.++++.|++.+.+ .+..|..|.| |||+|+..|+.+++++|+++|++++
T Consensus 5 ~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-------~~~~d~~g~t-~L~~A~~~~~~~~~~~Ll~~g~~~~------- 69 (115)
T 2l6b_A 5 GSKDGNTPLHNAAKNGHAEEVKKLLSKGAD-------VNARSKDGNT-PLHLAAKNGHAEIVKLLLAKGADVN------- 69 (115)
T ss_dssp CSCSSCCHHHHHHHHTCHHHHHHHTTTTCC-------SSCCCSSSCC-TTHHHHTTTCHHHHHHHTTTTCCTT-------
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-------CCCcCCCCCC-HHHHHHHcCcHHHHHHHHHcCCCCc-------
Confidence 345699999999999999999999999988 7778999999 9999999999999999999999987
Q ss_pred CCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHH
Q 039985 177 DKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNIL 222 (357)
Q Consensus 177 ~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpL 222 (357)
.+|..|.||||+|+..|+.+++++|+++|++++ .++..|.||-
T Consensus 70 ~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~n---~~~~~~~~~~ 112 (115)
T 2l6b_A 70 ARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVN---ARSWGSSHHH 112 (115)
T ss_dssp CCCTTCCCTTHHHHTTTCHHHHHHHHTTSSSHH---HHSCCCC---
T ss_pred ccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCC---cCCccccccc
Confidence 566679999999999999999999999999998 8899999873
|
| >2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A | Back alignment and structure |
|---|
Probab=99.79 E-value=2.8e-19 Score=140.65 Aligned_cols=93 Identities=12% Similarity=0.157 Sum_probs=83.7
Q ss_pred hhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccc
Q 039985 134 KKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDN 213 (357)
Q Consensus 134 ~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~ 213 (357)
....|.+|.| |||+|+..|+.+++++|+++|++++ .+|..|.||||+||..|+.+++++|+++|+++. .
T Consensus 17 ~~~~~~~g~t-~L~~A~~~g~~~~v~~Ll~~g~~i~-------~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~---~ 85 (110)
T 2zgd_A 17 GSHMGSDLGK-KLLEAARAGQDDEVRILMANGADVA-------AKDKNGSTPLHLAARNGHLEVVKLLLEAGADVX---A 85 (110)
T ss_dssp -----CCHHH-HHHHHHHHTCHHHHHHHHHTTCCTT-------CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT---C
T ss_pred ccccCCccch-HHHHHHHcCCHHHHHHHHHcCCCCC-------ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc---c
Confidence 3456788999 9999999999999999999999887 556679999999999999999999999999998 9
Q ss_pred cCCCCChHHHHHHHcCCHHHHHHH
Q 039985 214 LNEKEQNILHVAVKRRQYKVFELI 237 (357)
Q Consensus 214 ~d~~G~TpLh~A~~~g~~~iv~~L 237 (357)
+|..|+||||+|+..|+.+++++|
T Consensus 86 ~d~~g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 86 QDKFGKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred cccCCCcHHHHHHHcCCHHHHHHh
Confidence 999999999999999999999987
|
| >2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A | Back alignment and structure |
|---|
Probab=99.74 E-value=6.4e-18 Score=132.85 Aligned_cols=91 Identities=10% Similarity=0.068 Sum_probs=82.3
Q ss_pred CCCCCCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCc
Q 039985 96 TTSPANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHK 175 (357)
Q Consensus 96 ~~~~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~ 175 (357)
..+..|.|+||+|+..|+.++++.|++.+++ .+..|..|.| |||+|+..|+.+++++|+++|++++
T Consensus 19 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-------i~~~d~~g~t-pLh~A~~~~~~~~v~~Ll~~ga~~~------ 84 (110)
T 2zgd_A 19 HMGSDLGKKLLEAARAGQDDEVRILMANGAD-------VAAKDKNGST-PLHLAARNGHLEVVKLLLEAGADVX------ 84 (110)
T ss_dssp ---CCHHHHHHHHHHHTCHHHHHHHHHTTCC-------TTCCCTTCCC-HHHHHHHTTCHHHHHHHHHTTCCTT------
T ss_pred ccCCccchHHHHHHHcCCHHHHHHHHHcCCC-------CCccCCCCCC-HHHHHHHcCCHHHHHHHHHcCCCcc------
Confidence 3455699999999999999999999999988 7778999999 9999999999999999999999987
Q ss_pred cCCCcCcchHHHHHHHCCCHHHHHHH
Q 039985 176 KDKNWAIRLTLLFAASNGITEILKEI 201 (357)
Q Consensus 176 ~~~~~~G~TpLh~Aa~~G~~~iv~~L 201 (357)
.+|..|.||||+|+..|+.+++++|
T Consensus 85 -~~d~~g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 85 -AQDKFGKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp -CCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred -ccccCCCcHHHHHHHcCCHHHHHHh
Confidence 5666799999999999999999987
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 357 | |||
| d1uoha_ | 223 | 26S proteasome non-ATPase regulatory subunit 10, g | 99.98 | |
| d1oy3d_ | 255 | Transcription factor inhibitor I-kappa-B-beta, IKB | 99.97 | |
| d1oy3d_ | 255 | Transcription factor inhibitor I-kappa-B-beta, IKB | 99.97 | |
| d1ixva_ | 229 | 26S proteasome non-ATPase regulatory subunit 10, g | 99.96 | |
| d1s70b_ | 291 | Myosin phosphatase targeting subunit 1, MYPT1 {Chi | 99.96 | |
| d1uoha_ | 223 | 26S proteasome non-ATPase regulatory subunit 10, g | 99.95 | |
| d1iknd_ | 221 | I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606 | 99.95 | |
| d1ihba_ | 156 | p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606] | 99.95 | |
| d1ot8a_ | 209 | Neurogenic locus notch receptor domain {Fruit fly | 99.95 | |
| d1iknd_ | 221 | I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606 | 99.94 | |
| d2fo1e1 | 277 | Lin-12 {Caenorhabditis elegans [TaxId: 6239]} | 99.94 | |
| d1s70b_ | 291 | Myosin phosphatase targeting subunit 1, MYPT1 {Chi | 99.94 | |
| d1awcb_ | 153 | GA bindinig protein (GABP) beta 1 {Mouse (Mus musc | 99.94 | |
| d1bd8a_ | 156 | Cell cycle inhibitor p19ink4D {Human (Homo sapiens | 99.94 | |
| d1n11a_ | 408 | Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} | 99.93 | |
| d2fo1e1 | 277 | Lin-12 {Caenorhabditis elegans [TaxId: 6239]} | 99.93 | |
| d1ixva_ | 229 | 26S proteasome non-ATPase regulatory subunit 10, g | 99.93 | |
| d1k1aa_ | 228 | bcl-3 {Human (Homo sapiens) [TaxId: 9606]} | 99.93 | |
| d1bi7b_ | 125 | Cell cycle inhibitor p16ink4A {Human (Homo sapiens | 99.93 | |
| d1n11a_ | 408 | Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} | 99.92 | |
| d1myoa_ | 118 | Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116] | 99.92 | |
| d1myoa_ | 118 | Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116] | 99.91 | |
| d1ycsb1 | 130 | 53BP2 {Human (Homo sapiens) [TaxId: 9606]} | 99.91 | |
| d1bi7b_ | 125 | Cell cycle inhibitor p16ink4A {Human (Homo sapiens | 99.9 | |
| d1awcb_ | 153 | GA bindinig protein (GABP) beta 1 {Mouse (Mus musc | 99.9 | |
| d1bd8a_ | 156 | Cell cycle inhibitor p19ink4D {Human (Homo sapiens | 99.9 | |
| d1sw6a_ | 301 | Swi6 ankyrin-repeat fragment {Baker's yeast (Sacch | 99.9 | |
| d1k1aa_ | 228 | bcl-3 {Human (Homo sapiens) [TaxId: 9606]} | 99.9 | |
| d2ajaa1 | 346 | Hypothetical protein LPG2416 {Legionella pneumophi | 99.9 | |
| d2ajaa1 | 346 | Hypothetical protein LPG2416 {Legionella pneumophi | 99.9 | |
| d1wdya_ | 285 | RNase L, 2-5a-dependent ribonuclease {Human (Homo | 99.89 | |
| d1ihba_ | 156 | p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606] | 99.89 | |
| d1dcqa1 | 154 | Pyk2-associated protein beta {Mouse (Mus musculus) | 99.89 | |
| d1ot8a_ | 209 | Neurogenic locus notch receptor domain {Fruit fly | 99.89 | |
| d1ycsb1 | 130 | 53BP2 {Human (Homo sapiens) [TaxId: 9606]} | 99.88 | |
| d1sw6a_ | 301 | Swi6 ankyrin-repeat fragment {Baker's yeast (Sacch | 99.88 | |
| d1wdya_ | 285 | RNase L, 2-5a-dependent ribonuclease {Human (Homo | 99.86 | |
| d1dcqa1 | 154 | Pyk2-associated protein beta {Mouse (Mus musculus) | 99.85 |
| >d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.98 E-value=3.8e-31 Score=233.14 Aligned_cols=182 Identities=16% Similarity=0.147 Sum_probs=149.9
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCc
Q 039985 101 NISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNW 180 (357)
Q Consensus 101 g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~ 180 (357)
|+||||+||..|+.+++++|++.... ....+..+.+ +++.++..++.+++++|+++|++++ .+|.
T Consensus 37 G~TpLh~Aa~~g~~e~~~~l~~~~~~-------~~~~~~~~~~-~~~~~~~~~~~~i~~~Ll~~~~d~~-------~~d~ 101 (223)
T d1uoha_ 37 SRTALHWACSAGHTEIVEFLLQLGVP-------VNDKDDAGWS-PLHIAASAGRDEIVKALLGKGAQVN-------AVNQ 101 (223)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHHTCC-------SCCCCTTCCC-HHHHHHHHTCHHHHHHHHHTTCCTT-------CCCT
T ss_pred CCCHHHHHHHhhhhcccccccccccc-------cccccccccc-cccccccccccchhHHHhccCceeE-------eeCC
Confidence 66888888888888888888888776 5556777888 8888888888888888888888776 5556
Q ss_pred CcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcHH
Q 039985 181 AIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTLL 260 (357)
Q Consensus 181 ~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpL 260 (357)
.|.||||+|+..|+.+++++|+++|+++. .+|..|.||||+|+..++.+++++|+. .+.+++.+|.+|+|||
T Consensus 102 ~g~tpL~~A~~~~~~e~~~~Ll~~g~d~~---~~~~~~~t~L~~a~~~~~~~~~~~L~~-----~~~~i~~~d~~g~TpL 173 (223)
T d1uoha_ 102 NGCTPLHYAASKNRHEIAVMLLEGGANPD---AKDHYEATAMHRAAAKGNLKMIHILLY-----YKASTNIQDTEGNTPL 173 (223)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHTTCCTT---CCCTTSCCHHHHHHHTTCHHHHHHHHH-----TTCCSCCCCTTCCCHH
T ss_pred CCCchhhHHHHcCCHHHHHHHHHCCCCCC---CcCCCCCccchhhhhcCCcchhhhhcc-----ccceeeeccCCCCcee
Confidence 68889998888888888888888888887 888888889998888888888888876 6678888888889999
Q ss_pred HHHHHcCCCCCCCCCCChhHHHHHhhhHHHHHHhc-cCcccccccccCCCCHHHHHhhhhHHHHHH
Q 039985 261 HHVADMKHYKEGTRPGPVLQFQEELQLFEHVKEIM-PRHYAMHRDEKNKMTASDLFNLTHEDQLRK 325 (357)
Q Consensus 261 h~Aa~~g~~~~~~~~~t~L~la~~l~~~~~v~~ll-~~~~~~~~n~~g~~Tp~dl~~~~~~~~~~~ 325 (357)
|+|++.|+ .+.|+.++ .+.+.+.+|++|+ ||+++|...+...++.
T Consensus 174 ~~Aa~~g~-------------------~~~v~~LL~~Gad~~~~d~~g~-tpl~~A~~~~~~i~~~ 219 (223)
T d1uoha_ 174 HLACDEER-------------------VEEAKLLVSQGASIYIENKEEK-TPLQVAKGGLGLILKR 219 (223)
T ss_dssp HHHHHTTC-------------------HHHHHHHHHTTCCSCCCCTTSC-CHHHHCCTTHHHHHHH
T ss_pred ccccccCc-------------------HHHHHHHHHCCCCCCCCCCCCC-CHHHHHHCCCHHHHhc
Confidence 98888886 34566666 3458899999999 9999998777665543
|
| >d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Transcription factor inhibitor I-kappa-B-beta, IKBB species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.97 E-value=3.2e-30 Score=230.41 Aligned_cols=184 Identities=15% Similarity=0.067 Sum_probs=151.8
Q ss_pred CCCCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccC
Q 039985 98 SPANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKD 177 (357)
Q Consensus 98 ~~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~ 177 (357)
+..|.||||+||+.|+.+++++|++.+++ . ...+..|..|.| |||+|+..|+.+++++|+++|++++ .
T Consensus 6 ~~~G~t~Lh~A~~~~~~~~v~~Ll~~~a~-~---~~i~~~~~~g~T-pL~~A~~~g~~~iv~~Ll~~ga~i~-------~ 73 (255)
T d1oy3d_ 6 TEDGDTALHLAVIHQHEPFLDFLLGFSAG-H---EYLDLQNDLGQT-ALHLAAILGEASTVEKLYAAGAGVL-------V 73 (255)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHHHHTT-S---GGGGCCCTTSCC-HHHHHHHHTCHHHHHHHHHTTCCSS-------C
T ss_pred CcCCCCHHHHHHHcCCHHHHHHHHHcCCC-c---ccccCcCCCCCC-ccchHHhhccccccccccccccccc-------c
Confidence 34599999999999999999999998765 1 114567899999 9999999999999999999999987 5
Q ss_pred CCcCcchHHHHHHHCCCHHHHHHHHhhCCCccc--------------------------------------------ccc
Q 039985 178 KNWAIRLTLLFAASNGITEILKEIIHQHPQAIL--------------------------------------------LDN 213 (357)
Q Consensus 178 ~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~--------------------------------------------~~~ 213 (357)
+|..|.||||+|+..|+.+++++|++.+..... ++.
T Consensus 74 ~d~~g~tpL~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~ 153 (255)
T d1oy3d_ 74 AERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEA 153 (255)
T ss_dssp CCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTC
T ss_pred cccccchhhhhhhccCchHHHHHHHhhccchhcccchhhhhHHhhhcccchHHHHHHHhhcchhHHHHHHhhhcCccccc
Confidence 666799999999999999999999876532110 046
Q ss_pred cCCCCChHHHHHHHcCCHHHHHHHHhhhccCCcccc-ccccCCCCcHHHHHHHcCCCCCCCCCCChhHHHHHhhhHHHHH
Q 039985 214 LNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWA-SRIDKKGYTLLHHVADMKHYKEGTRPGPVLQFQEELQLFEHVK 292 (357)
Q Consensus 214 ~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~-~~~d~~G~TpLh~Aa~~g~~~~~~~~~t~L~la~~l~~~~~v~ 292 (357)
+|..|+||||+||..++.+++++|++. +... +.++..|.||||+|++.|+. +.++
T Consensus 154 ~d~~g~TpLh~A~~~~~~~~v~~Ll~~-----~~~~~~~~~~~g~TpL~~A~~~~~~-------------------~~v~ 209 (255)
T d1oy3d_ 154 ENYDGHTPLHVAVIHKDAEMVRLLRDA-----GADLNKPEPTCGRTPLHLAVEAQAA-------------------SVLE 209 (255)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHH-----TCCTTCCCTTTCCCHHHHHHHTTCH-------------------HHHH
T ss_pred ccccCcccccccccccccccccchhcc-----cccccccccccccccccccccccHH-------------------HHHH
Confidence 788999999999999999999999984 3344 45678899999999999973 3455
Q ss_pred Hhcc-CcccccccccCCCCHHHHHhhh
Q 039985 293 EIMP-RHYAMHRDEKNKMTASDLFNLT 318 (357)
Q Consensus 293 ~ll~-~~~~~~~n~~g~~Tp~dl~~~~ 318 (357)
.++. ..+++.+|++|+ ||+++|...
T Consensus 210 ~Ll~~gadin~~d~~g~-t~L~~A~~~ 235 (255)
T d1oy3d_ 210 LLLKAGADPTARMYGGR-TPLGSALLR 235 (255)
T ss_dssp HHHHTTCCTTCCCTTSC-CHHHHHHTS
T ss_pred HHHHCCCCCCCCCCCCC-CHHHHHHHC
Confidence 5553 348889999999 999998643
|
| >d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Transcription factor inhibitor I-kappa-B-beta, IKBB species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.97 E-value=3.8e-30 Score=229.88 Aligned_cols=154 Identities=15% Similarity=0.051 Sum_probs=136.1
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCC---------
Q 039985 101 NISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGV--------- 171 (357)
Q Consensus 101 g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~--------- 171 (357)
|.||||+||..|+.+++++|++.+++ .+..|.+|.| |||+|+..++.+++++|++.+......
T Consensus 45 g~TpL~~A~~~g~~~iv~~Ll~~ga~-------i~~~d~~g~t-pL~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~~ 116 (255)
T d1oy3d_ 45 GQTALHLAAILGEASTVEKLYAAGAG-------VLVAERGGHT-ALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQS 116 (255)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTTCC-------SSCCCTTSCC-HHHHHTTTTCHHHHHHHSSSCCSSCCCC--------
T ss_pred CCCccchHHhhccccccccccccccc-------ccccccccch-hhhhhhccCchHHHHHHHhhccchhcccchhhhhHH
Confidence 78999999999999999999999998 7789999999 999999999999999998865421100
Q ss_pred -------------------------------CCCccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCCh
Q 039985 172 -------------------------------PNHKKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQN 220 (357)
Q Consensus 172 -------------------------------~~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~T 220 (357)
....+.+|..|.||||+||..|+.+++++|++.+++.. ...+..|.|
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~~~~~~~--~~~~~~g~T 194 (255)
T d1oy3d_ 117 QDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLN--KPEPTCGRT 194 (255)
T ss_dssp ---------------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTT--CCCTTTCCC
T ss_pred hhhcccchHHHHHHHhhcchhHHHHHHhhhcCcccccccccCcccccccccccccccccchhccccccc--ccccccccc
Confidence 00112457789999999999999999999999999998 667889999
Q ss_pred HHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcHHHHHHHcCCC
Q 039985 221 ILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTLLHHVADMKHY 269 (357)
Q Consensus 221 pLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~ 269 (357)
|||+|+..|+.+++++|++ .+++++.+|.+|+||||+|+..|+.
T Consensus 195 pL~~A~~~~~~~~v~~Ll~-----~gadin~~d~~g~t~L~~A~~~~~~ 238 (255)
T d1oy3d_ 195 PLHLAVEAQAASVLELLLK-----AGADPTARMYGGRTPLGSALLRPNP 238 (255)
T ss_dssp HHHHHHHTTCHHHHHHHHH-----TTCCTTCCCTTSCCHHHHHHTSSCH
T ss_pred cccccccccHHHHHHHHHH-----CCCCCCCCCCCCCCHHHHHHHCCCH
Confidence 9999999999999999988 6789999999999999999999973
|
| >d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.96 E-value=2.1e-28 Score=214.93 Aligned_cols=199 Identities=15% Similarity=0.094 Sum_probs=136.3
Q ss_pred CCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCcC
Q 039985 102 ISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNWA 181 (357)
Q Consensus 102 ~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~ 181 (357)
.+|||+||..|+.++++.|++..+.. .+.+|.+|.| |||+|+..|+.++|++|+++|++++... ..+..
T Consensus 1 n~pLh~A~~~g~~~~v~~Ll~~~~~~------~~~~d~~G~T-pL~~A~~~g~~~iv~~Ll~~ga~~~~~~----~~~~~ 69 (229)
T d1ixva_ 1 NYPLHQACMENEFFKVQELLHSKPSL------LLQKDQDGRI-PLHWSVSFQAHEITSFLLSKMENVNLDD----YPDDS 69 (229)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHHCGGG------TTCCCTTSCC-HHHHHHHTTCHHHHHHHHTTCTTCCGGG----CCCTT
T ss_pred CHhHHHHHHcCCHHHHHHHHHcCCCc------ccccCCCCCC-HHHHHHHcCCccccchhhhhhccccccc----ccccc
Confidence 37999999999999999999876652 5568899999 9999999999999999999998765221 22334
Q ss_pred cchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcHHH
Q 039985 182 IRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTLLH 261 (357)
Q Consensus 182 G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLh 261 (357)
|.||+|+|+..+..++++.++..+.... ....+..+.|||+.++..++.+++++|+. .+...+.+|.+|+||||
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~l~~-----~~~~~~~~~~~g~t~l~ 143 (229)
T d1ixva_ 70 GWTPFHIACSVGNLEVVKSLYDRPLKPD-LNKITNQGVTCLHLAVGKKWFEVSQFLIE-----NGASVRIKDKFNQIPLH 143 (229)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHSSSSCCC-TTCCCTTSCCHHHHHHHTTCHHHHHHHHH-----TTCCSCCCCTTSCCHHH
T ss_pred cccccccccccccccccccccccccccc-ccccccccccccccccccchhhhhhhhhh-----hcccccccCCCCCCccc
Confidence 6666666666666666666665554332 02345556666666666666666666655 34455555666666666
Q ss_pred HHHHcCCCC---------------CCCCCCChhHHHHHhhhHHHHHHhcc--CcccccccccCCCCHHHHHhhh
Q 039985 262 HVADMKHYK---------------EGTRPGPVLQFQEELQLFEHVKEIMP--RHYAMHRDEKNKMTASDLFNLT 318 (357)
Q Consensus 262 ~Aa~~g~~~---------------~~~~~~t~L~la~~l~~~~~v~~ll~--~~~~~~~n~~g~~Tp~dl~~~~ 318 (357)
+|+..|+.+ ....+.|||++|...+..+.|+.|+. +.+++.+|++|+ ||+++|.+.
T Consensus 144 ~a~~~~~~~~~~~Ll~~~~~~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~~~gad~~~~d~~g~-t~l~~A~~~ 216 (229)
T d1ixva_ 144 RAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGA-KAEDVALNE 216 (229)
T ss_dssp HHHHHTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCCCTTSC-CTGGGCSCH
T ss_pred hhhhcccccccccccccccccccccccccCCchhhhcccccHHHHHHHHHhcCCCCCCcCCCCC-CHHHHHhhH
Confidence 666555432 11223366666666556677888774 458899999999 999999743
|
| >d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Myosin phosphatase targeting subunit 1, MYPT1 species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.96 E-value=1.4e-28 Score=223.86 Aligned_cols=206 Identities=15% Similarity=0.076 Sum_probs=159.2
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCc
Q 039985 101 NISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNW 180 (357)
Q Consensus 101 g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~ 180 (357)
|.|+||.||..|+.++|++||+.|++ ++..|.+|.| |||+|+..|+.++|++|+++|++.. ..+.
T Consensus 40 ~~t~l~~A~~~G~~~~v~~Ll~~Gad-------vn~~d~~G~T-~L~~A~~~g~~eiv~~Ll~~~~~~~-------~~~~ 104 (291)
T d1s70b_ 40 DGAVFLAACSSGDTEEVLRLLERGAD-------INYANVDGLT-ALHQACIDDNVDMVKFLVENGANIN-------QPDN 104 (291)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHCCC-------TTCBCTTCCB-HHHHHHHTTCHHHHHHHHHTTCCTT-------CCCT
T ss_pred CchHHHHHHHcCCHHHHHHHHHCCCC-------CCccCCCCCc-HHHHHHhcCCceeeeeecccccccc-------cccc
Confidence 56999999999999999999999998 7789999999 9999999999999999999998865 3444
Q ss_pred CcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccC----------------
Q 039985 181 AIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLS---------------- 244 (357)
Q Consensus 181 ~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~---------------- 244 (357)
.+.||||+|+..|+.++++.|+++|+... ..|..|.+|+++|+..++.++++.++...+..
T Consensus 105 ~~~~~L~~a~~~~~~~~~~~l~~~~~~~~---~~~~~~~~~~~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~ 181 (291)
T d1s70b_ 105 EGWIPLHAAASCGYLDIAEYLISQGAHVG---AVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDA 181 (291)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHTTCCTT---CCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccchhhcccccCcccc---cccccCccccccccccccchhccccccccccccccccccccccccccc
Confidence 58999999999999999999999998776 66777777777777777777666665432110
Q ss_pred ------CccccccccCCCCcHHHHHHHcCCCC--------------CCCCCCChhHHHHHhhhHHHHHHhcc-Ccccccc
Q 039985 245 ------VPKWASRIDKKGYTLLHHVADMKHYK--------------EGTRPGPVLQFQEELQLFEHVKEIMP-RHYAMHR 303 (357)
Q Consensus 245 ------~~~~~~~~d~~G~TpLh~Aa~~g~~~--------------~~~~~~t~L~la~~l~~~~~v~~ll~-~~~~~~~ 303 (357)
........+..|.||||+|+..|+.+ ....+.|||++|...+..+.|+.|+. +.+++.+
T Consensus 182 ~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~g~din~~~~~g~TpL~~A~~~g~~~iv~lLl~~Gadv~~~ 261 (291)
T d1s70b_ 182 RQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAV 261 (291)
T ss_dssp HHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred hhhhcccccccccccCCCCChhhHHHHcCChhhhcccccceecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCc
Confidence 01233445666777777777776543 11233367777777777778888884 4588999
Q ss_pred cccCCCCHHHHHhhhhHHHHHH
Q 039985 304 DEKNKMTASDLFNLTHEDQLRK 325 (357)
Q Consensus 304 n~~g~~Tp~dl~~~~~~~~~~~ 325 (357)
|++|+ ||+++|.+....++++
T Consensus 262 d~~G~-TaL~~A~e~~~~~L~~ 282 (291)
T d1s70b_ 262 NKVGQ-TAFDVADEDILGYLEE 282 (291)
T ss_dssp CTTSC-CTTTSCCSGGGHHHHH
T ss_pred CCCCC-CHHHHHHHHHHHHHHH
Confidence 99999 9999998754444443
|
| >d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=2.3e-27 Score=208.61 Aligned_cols=146 Identities=13% Similarity=0.079 Sum_probs=135.6
Q ss_pred CCCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCC
Q 039985 99 PANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDK 178 (357)
Q Consensus 99 ~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~ 178 (357)
..+.++++.|+..|+.++++.|++.+.+ .+..|.+|.| |||+|+..|+.+++++|+++|++++ .+
T Consensus 68 ~~~~~~~~~~~~~~~~~i~~~Ll~~~~d-------~~~~d~~g~t-pL~~A~~~~~~e~~~~Ll~~g~d~~-------~~ 132 (223)
T d1uoha_ 68 DAGWSPLHIAASAGRDEIVKALLGKGAQ-------VNAVNQNGCT-PLHYAASKNRHEIAVMLLEGGANPD-------AK 132 (223)
T ss_dssp TTCCCHHHHHHHHTCHHHHHHHHHTTCC-------TTCCCTTCCC-HHHHHHHHTCHHHHHHHHHTTCCTT-------CC
T ss_pred ccccccccccccccccchhHHHhccCce-------eEeeCCCCCc-hhhHHHHcCCHHHHHHHHHCCCCCC-------Cc
Confidence 3478999999999999999999999987 7789999999 9999999999999999999999887 55
Q ss_pred CcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCc
Q 039985 179 NWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYT 258 (357)
Q Consensus 179 ~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~T 258 (357)
+..|.||||+|+..|+.+++++|++.+.+++ .+|..|+||||+|+..|+.++|++|++ .|++++.+|.+|+|
T Consensus 133 ~~~~~t~L~~a~~~~~~~~~~~L~~~~~~i~---~~d~~g~TpL~~Aa~~g~~~~v~~LL~-----~Gad~~~~d~~g~t 204 (223)
T d1uoha_ 133 DHYEATAMHRAAAKGNLKMIHILLYYKASTN---IQDTEGNTPLHLACDEERVEEAKLLVS-----QGASIYIENKEEKT 204 (223)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHTTCCSC---CCCTTCCCHHHHHHHTTCHHHHHHHHH-----TTCCSCCCCTTSCC
T ss_pred CCCCCccchhhhhcCCcchhhhhccccceee---eccCCCCceeccccccCcHHHHHHHHH-----CCCCCCCCCCCCCC
Confidence 6669999999999999999999999999988 999999999999999999999999997 68899999999999
Q ss_pred HHHHHHHcCC
Q 039985 259 LLHHVADMKH 268 (357)
Q Consensus 259 pLh~Aa~~g~ 268 (357)
|||+|+ .|+
T Consensus 205 pl~~A~-~~~ 213 (223)
T d1uoha_ 205 PLQVAK-GGL 213 (223)
T ss_dssp HHHHCC-TTH
T ss_pred HHHHHH-CCC
Confidence 999984 453
|
| >d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: I-kappa-B-alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=7.5e-28 Score=211.15 Aligned_cols=158 Identities=14% Similarity=0.095 Sum_probs=140.9
Q ss_pred CCCCCCCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCC
Q 039985 95 STTSPANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNH 174 (357)
Q Consensus 95 ~~~~~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~ 174 (357)
+..+..|+||||+|+..|+.+++++|++.+++ ....|..|.| |||+|+..|+.++++.|++.+.........
T Consensus 33 n~~d~~g~TpLh~A~~~~~~~iv~~L~~~g~d-------~~~~d~~g~t-~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 104 (221)
T d1iknd_ 33 NFQNNLQQTPLHLAVITNQPEIAEALLGAGCD-------PELRDFRGNT-PLHLACEQGCLASVGVLTQSCTTPHLHSIL 104 (221)
T ss_dssp CCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCC-------SCCCCTTCCC-HHHHHHHHTCHHHHHHHHHSTTTTSSSCGG
T ss_pred ccCCCCCCcccccccccccccccccccccccc-------cccccccccc-ccccccccccccccchhhhhcccccccccc
Confidence 44556799999999999999999999999998 7788999999 999999999999999999988765533222
Q ss_pred ccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccC
Q 039985 175 KKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDK 254 (357)
Q Consensus 175 ~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~ 254 (357)
. .....|.||||+|+..|+.+++++|+..++..+ ...+.+|+||||+|+..|+.+++++|++ .+++++.+|.
T Consensus 105 ~-~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~--~~~~~~G~T~L~~A~~~g~~~~v~~Ll~-----~gad~~~~~~ 176 (221)
T d1iknd_ 105 K-ATNYNGHTCLHLASIHGYLGIVELLVSLGADVN--AQEPCNGRTALHLAVDLQNPDLVSLLLK-----CGADVNRVTY 176 (221)
T ss_dssp G-CCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTT--CCCTTTCCCHHHHHHHTTCHHHHHHHHT-----TTCCSCCCCT
T ss_pred c-ccccccchhhhHHhhcCChhheeeecccCcccc--cccccCCCCccccccccccHHHHHHHHh-----cCCcccccCC
Confidence 2 445568999999999999999999999999998 5566789999999999999999999987 6889999999
Q ss_pred CCCcHHHHHHHcCC
Q 039985 255 KGYTLLHHVADMKH 268 (357)
Q Consensus 255 ~G~TpLh~Aa~~g~ 268 (357)
+|+||||+|+..++
T Consensus 177 ~G~tpl~~A~~~~~ 190 (221)
T d1iknd_ 177 QGYSPYQLTWGRPS 190 (221)
T ss_dssp TCCCGGGGCTTSSC
T ss_pred CCCCHHHHHHHCCC
Confidence 99999999999987
|
| >d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: p18ink4C(ink6) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=1.8e-27 Score=196.93 Aligned_cols=145 Identities=13% Similarity=0.149 Sum_probs=134.6
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCc
Q 039985 101 NISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNW 180 (357)
Q Consensus 101 g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~ 180 (357)
| ++||+||..|+.++|+.|++.+++ ++..|.+|.| |||+|+ .|+.+++++|+++|++++ .++.
T Consensus 2 ~-~~Lh~Aa~~g~~~~v~~Ll~~g~d-------~n~~d~~g~T-pL~~A~-~~~~ei~~~Ll~~~a~~~-------~~~~ 64 (156)
T d1ihba_ 2 G-NELASAAARGDLEQLTSLLQNNVN-------VNAQNGFGRT-ALQVMK-LGNPEIARRLLLRGANPD-------LKDR 64 (156)
T ss_dssp H-HHHHHHHHHTCHHHHHHHTTSCCC-------TTCCCTTSCC-HHHHCC-SSCHHHHHHHHHTTCCTT-------CCCT
T ss_pred h-HHHHHHHHcCCHHHHHHHHHCCCC-------cCccCCcccc-cccccc-cccccccccccccccccc-------cccc
Confidence 5 899999999999999999999998 7789999999 999886 789999999999999987 5556
Q ss_pred CcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcHH
Q 039985 181 AIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTLL 260 (357)
Q Consensus 181 ~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpL 260 (357)
.|.|||+.++..|+.++++.|++.+.+.. ..|..|.+|||+|+..++.+++++|+.+ .+.+.+.+|.+|.|||
T Consensus 65 ~~~~~l~~~~~~~~~~~~~~l~~~~~~~~---~~~~~~~~~l~~a~~~~~~~~~~~Ll~~----~~~~~~~~d~~g~TpL 137 (156)
T d1ihba_ 65 TGFAVIHDAARAGFLDTLQTLLEFQADVN---IEDNEGNLPLHLAAKEGHLRVVEFLVKH----TASNVGHRNHKGDTAC 137 (156)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHTTCCTT---CCCTTSCCHHHHHHHTTCHHHHHHHHHH----SCCCTTCCCTTSCCHH
T ss_pred cCccccccccccccccccccccccccccc---cccccccccccccccccccccccccccc----ccccccccCCCCCCHH
Confidence 69999999999999999999999999988 8999999999999999999999999986 4458899999999999
Q ss_pred HHHHHcCCC
Q 039985 261 HHVADMKHY 269 (357)
Q Consensus 261 h~Aa~~g~~ 269 (357)
|+|++.|+.
T Consensus 138 ~~A~~~~~~ 146 (156)
T d1ihba_ 138 DLARLYGRN 146 (156)
T ss_dssp HHHHHTTCH
T ss_pred HHHHHcCCH
Confidence 999999973
|
| >d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Neurogenic locus notch receptor domain species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.95 E-value=5.6e-27 Score=202.81 Aligned_cols=146 Identities=17% Similarity=0.177 Sum_probs=122.3
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHH------------------------------
Q 039985 101 NISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFV------------------------------ 150 (357)
Q Consensus 101 g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~------------------------------ 150 (357)
|.||||+||..|+.++++.|++.++. ++..+..+.+ +++.++
T Consensus 23 G~t~L~~A~~~g~~e~v~~Ll~~g~~-------~n~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (209)
T d1ot8a_ 23 GETSLHLAARFARADAAKRLLDAGAD-------ANSQDNTGRT-PLHAAVAADAMGVFQILLRNRATNLNARMHDGTTPL 94 (209)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCC-------TTCCCTTSCC-HHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTCCCHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHhhccc-------cccccccccc-cccccccccccccccccccccccccccccccccccc
Confidence 55999999999999999999998876 4444444444 444444
Q ss_pred ----hcCcHHHHHHHHHcCCCCCCCCCCccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHH
Q 039985 151 ----DFSAAELVELFVKKDCTIKGVPNHKKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAV 226 (357)
Q Consensus 151 ----~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~ 226 (357)
......+.+.|+..+++++ .++..|.||||+|+.+|..++++.|++++.+++ ..|..|.||||+|+
T Consensus 95 ~~~~~~~~~~~~~~L~~~~~~~~-------~~~~~~~t~l~~~~~~~~~~~~~~l~~~~~~~~---~~d~~g~TpL~~A~ 164 (209)
T d1ot8a_ 95 ILAARLAIEGMVEDLITADADIN-------AADNSGKTALHWAAAVNNTEAVNILLMHHANRD---AQDDKDETPLFLAA 164 (209)
T ss_dssp HHHHHTTCTTHHHHHHHTTCCTT-------CBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTT---CCCTTCCCHHHHHH
T ss_pred cccccccchhhhhhhhhhccccc-------ccCCCCCCcchhhcccCcceeeeeecccccccc---ccccccccccchhc
Confidence 4445556666666666655 556679999999999999999999999999998 89999999999999
Q ss_pred HcCCHHHHHHHHhhhccCCccccccccCCCCcHHHHHHHcCCC
Q 039985 227 KRRQYKVFELITKEMQLSVPKWASRIDKKGYTLLHHVADMKHY 269 (357)
Q Consensus 227 ~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~ 269 (357)
..|+.++|++|++ .+++++.+|.+|+||||+|++.|+.
T Consensus 165 ~~g~~~~v~~Ll~-----~gad~n~~d~~g~Tpl~~A~~~~~~ 202 (209)
T d1ot8a_ 165 REGSYEASKALLD-----NFANREITDHMDRLPRDVASERLHH 202 (209)
T ss_dssp HTTCHHHHHHHHH-----TTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred cccHHHHHHHHHH-----CCCCCCCcCCCCCCHHHHHHHcCCH
Confidence 9999999999998 6789999999999999999999984
|
| >d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: I-kappa-B-alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=1.6e-27 Score=208.96 Aligned_cols=180 Identities=14% Similarity=0.065 Sum_probs=146.2
Q ss_pred CCCCHHHHHHhcCCHHHHHH----HHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCc
Q 039985 100 ANISTISLGLGKGNMLKAKK----LVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHK 175 (357)
Q Consensus 100 ~g~t~Lh~A~~~g~~~~vk~----Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~ 175 (357)
.|.||||+|+..|+.++++. +...+.. .+..|.+|+| |||+|+..|+.+++++|+++|++++
T Consensus 1 dG~t~Lh~A~~~g~~~~~~~li~~~~~~~~~-------in~~d~~g~T-pLh~A~~~~~~~iv~~L~~~g~d~~------ 66 (221)
T d1iknd_ 1 DGDSFLHLAIIHEEKALTMEVIRQVKGDLAF-------LNFQNNLQQT-PLHLAVITNQPEIAEALLGAGCDPE------ 66 (221)
T ss_dssp CCCCTTHHHHHTTCSSSSSCCCC-----CCC-------CCCCCTTCCC-HHHHHHHTTCHHHHHCCCSCCCCSC------
T ss_pred CCChHHHHHHHcCCHHHHHHHHHHHHhCCCC-------cccCCCCCCc-ccccccccccccccccccccccccc------
Confidence 48999999999999755554 4445555 6678999999 9999999999999999999999987
Q ss_pred cCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcc---cccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccc
Q 039985 176 KDKNWAIRLTLLFAASNGITEILKEIIHQHPQAI---LLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRI 252 (357)
Q Consensus 176 ~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~---~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~ 252 (357)
.+|..|.||||+|+..|+.++++.|++.+.... ........|.||||.|+..++.+++++|+. .+..++.+
T Consensus 67 -~~d~~g~t~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~-----~~~~~~~~ 140 (221)
T d1iknd_ 67 -LRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVS-----LGADVNAQ 140 (221)
T ss_dssp -CCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHH-----HTCCTTCC
T ss_pred -ccccccccccccccccccccccchhhhhcccccccccccccccccchhhhHHhhcCChhheeeecc-----cCcccccc
Confidence 566679999999999999999999999876543 113456678999999999999999999987 45566655
Q ss_pred -cCCCCcHHHHHHHcCCCCCCCCCCChhHHHHHhhhHHHHHHhcc-CcccccccccCCCCHHHHHhhhh
Q 039985 253 -DKKGYTLLHHVADMKHYKEGTRPGPVLQFQEELQLFEHVKEIMP-RHYAMHRDEKNKMTASDLFNLTH 319 (357)
Q Consensus 253 -d~~G~TpLh~Aa~~g~~~~~~~~~t~L~la~~l~~~~~v~~ll~-~~~~~~~n~~g~~Tp~dl~~~~~ 319 (357)
+.+|+||||+|++.|+. +.++.|+. +.+.+.+|.+|+ ||+++|.+..
T Consensus 141 ~~~~G~T~L~~A~~~g~~-------------------~~v~~Ll~~gad~~~~~~~G~-tpl~~A~~~~ 189 (221)
T d1iknd_ 141 EPCNGRTALHLAVDLQNP-------------------DLVSLLLKCGADVNRVTYQGY-SPYQLTWGRP 189 (221)
T ss_dssp CTTTCCCHHHHHHHTTCH-------------------HHHHHHHTTTCCSCCCCTTCC-CGGGGCTTSS
T ss_pred cccCCCCccccccccccH-------------------HHHHHHHhcCCcccccCCCCC-CHHHHHHHCC
Confidence 46799999999999973 34666663 458899999999 9999987543
|
| >d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Lin-12 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.94 E-value=2.6e-27 Score=213.29 Aligned_cols=181 Identities=17% Similarity=0.092 Sum_probs=132.8
Q ss_pred CCCCHHHHHHhcCCHHHHHHHH--------hcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCC
Q 039985 100 ANISTISLGLGKGNMLKAKKLV--------DFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGV 171 (357)
Q Consensus 100 ~g~t~Lh~A~~~g~~~~vk~Ll--------~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~ 171 (357)
+|+||||+||..|+.++|+.|+ +.|++ ++..|.+|.| |||+|+..|+.++|++|+++|++++
T Consensus 32 ~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~l~~Gad-------vn~~d~~G~T-pLh~A~~~g~~~iv~~Ll~~Gad~n-- 101 (277)
T d2fo1e1 32 HNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGAD-------VNAMDCDENT-PLMLAVLARRRRLVAYLMKAGADPT-- 101 (277)
T ss_dssp SCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCC-------TTCCCTTSCC-HHHHHHHHTCHHHHHHHHHTTCCSC--
T ss_pred CCccHHHHHHHcCCHHHHHHHHhcchhHHHHcCCC-------ccccCCCCCe-eeccccccccccccccccccccccc--
Confidence 5999999999999999998875 44555 6778999999 9999999999999999999999987
Q ss_pred CCCccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccc----------------------------------------
Q 039985 172 PNHKKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILL---------------------------------------- 211 (357)
Q Consensus 172 ~~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~---------------------------------------- 211 (357)
.+|..|.||||+|+..|+.++++.++..+.....+
T Consensus 102 -----~~~~~g~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (277)
T d2fo1e1 102 -----IYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDG 176 (277)
T ss_dssp -----CCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCS
T ss_pred -----cccccccccccchhhhcchhhhhhhhhcccccccccccccccchhHHHHHhcccccccccccccccccccccccc
Confidence 56667999999999999999999887653211101
Q ss_pred ----cccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcHHHHHHHcCCCCCCCCCCChhHHHHHhhh
Q 039985 212 ----DNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTLLHHVADMKHYKEGTRPGPVLQFQEELQL 287 (357)
Q Consensus 212 ----~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~~~~~t~L~la~~l~~ 287 (357)
...+..|+||||+++..++.+++++++.. .+.+.+.+|..|+||||+|++.| .
T Consensus 177 ~~~~~~~~~~g~t~L~~~~~~~~~~~~~~~l~~----~~~~~~~~d~~g~tpL~~A~~~g-------------------~ 233 (277)
T d2fo1e1 177 AARKDSEKYKGRTALHYAAQVSNMPIVKYLVGE----KGSNKDKQDEDGKTPIMLAAQEG-------------------R 233 (277)
T ss_dssp GGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHH----SCCCTTCCCTTCCCHHHHHHHHT-------------------C
T ss_pred cccccccccCCCCcccccccccccccccccccc----ccccccccCCCCCCHHHHHHHcC-------------------C
Confidence 22334455555555555555555554433 34445555555555555555555 4
Q ss_pred HHHHHHhcc-CcccccccccCCCCHHHHHhhhh
Q 039985 288 FEHVKEIMP-RHYAMHRDEKNKMTASDLFNLTH 319 (357)
Q Consensus 288 ~~~v~~ll~-~~~~~~~n~~g~~Tp~dl~~~~~ 319 (357)
.+.|+.++. +.+++.+|++|. ||+++|....
T Consensus 234 ~~iv~~Ll~~gadin~~d~~G~-T~L~~A~~~~ 265 (277)
T d2fo1e1 234 IEVVMYLIQQGASVEAVDATDH-TARQLAQANN 265 (277)
T ss_dssp HHHHHHHHHTTCCSSCCCSSSC-CHHHHHHHTT
T ss_pred HHHHHHHHHCcCCCCCcCCCCC-CHHHHHHHcC
Confidence 566777774 458889999999 9999997644
|
| >d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Myosin phosphatase targeting subunit 1, MYPT1 species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=99.94 E-value=6.6e-27 Score=212.64 Aligned_cols=149 Identities=16% Similarity=0.141 Sum_probs=108.8
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCC--------
Q 039985 101 NISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVP-------- 172 (357)
Q Consensus 101 g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~-------- 172 (357)
|.||||+|+..|+.+++++|++.+.+ ....+..+.+ ||++|+..++.++++.|+++|.......
T Consensus 73 G~T~L~~A~~~g~~eiv~~Ll~~~~~-------~~~~~~~~~~-~L~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 144 (291)
T d1s70b_ 73 GLTALHQACIDDNVDMVKFLVENGAN-------INQPDNEGWI-PLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLD 144 (291)
T ss_dssp CCBHHHHHHHTTCHHHHHHHHHTTCC-------TTCCCTTSCC-HHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred CCcHHHHHHhcCCceeeeeecccccc-------cccccccccc-cccccccccccchhhcccccCcccccccccCccccc
Confidence 44666666666666666666666555 3444555555 6666666666666666665554322110
Q ss_pred ---------------------------------------------CCccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCC
Q 039985 173 ---------------------------------------------NHKKDKNWAIRLTLLFAASNGITEILKEIIHQHPQ 207 (357)
Q Consensus 173 ---------------------------------------------~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~ 207 (357)
......+..|.||||+|+..|+.++++.|+++|++
T Consensus 145 ~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~g~d 224 (291)
T d1s70b_ 145 IAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYD 224 (291)
T ss_dssp HCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCC
T ss_pred cccccccchhccccccccccccccccccccccccccchhhhcccccccccccCCCCChhhHHHHcCChhhhcccccceec
Confidence 00113345689999999999999999999999999
Q ss_pred cccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcHHHHHHH
Q 039985 208 AILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTLLHHVAD 265 (357)
Q Consensus 208 ~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~ 265 (357)
++ .+|..|+||||+|+..|+.++|++|++ .|++++.+|.+|+||||+|++
T Consensus 225 in---~~~~~g~TpL~~A~~~g~~~iv~lLl~-----~Gadv~~~d~~G~TaL~~A~e 274 (291)
T d1s70b_ 225 VN---IKDYDGWTPLHAAAHWGKEEACRILVE-----NLCDMEAVNKVGQTAFDVADE 274 (291)
T ss_dssp TT---CCCTTCCCHHHHHHHTTCHHHHHHHHH-----TTCCTTCCCTTSCCTTTSCCS
T ss_pred cc---ccccCCCCHHHHHHHcCCHHHHHHHHH-----CCCCCCCcCCCCCCHHHHHHH
Confidence 88 889999999999999999999999987 688999999999999999975
|
| >d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: GA bindinig protein (GABP) beta 1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.94 E-value=3.1e-26 Score=188.71 Aligned_cols=144 Identities=15% Similarity=0.090 Sum_probs=132.0
Q ss_pred CCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCcC
Q 039985 102 ISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNWA 181 (357)
Q Consensus 102 ~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~ 181 (357)
.||||.||+.|+.++|+.||+.+++ .. .|..|.| |||+|+..++.++++.++....... ..+..
T Consensus 3 ~t~L~~Aa~~g~~~~v~~LL~~ga~-------~~-~~~~g~t-~L~~a~~~~~~~~~~~~~~~~~~~~-------~~~~~ 66 (153)
T d1awcb_ 3 GKKLLEAARAGQDDEVRILMANGAP-------FT-TDWLGTS-PLHLAAQYGHFSTTEVLLRAGVSRD-------ARTKV 66 (153)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHTCC-------CC-CCTTCCC-HHHHHHHHTCHHHHHHHHTTTCCTT-------CCCTT
T ss_pred CHHHHHHHHCCCHHHHHHHHHcCCC-------cc-cccCCCc-ccccccccccccccccccccccccc-------ccccc
Confidence 3899999999999999999999987 33 6899999 9999999999999999999877765 33334
Q ss_pred cchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcHHH
Q 039985 182 IRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTLLH 261 (357)
Q Consensus 182 G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLh 261 (357)
+.++++.++...+.+++++|+.++++.. .+|.+|+||||+|+..|+.++|++|++ .+++++.+|.+|.||||
T Consensus 67 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~---~~~~~g~T~L~~A~~~g~~~iv~~ll~-----~gad~~~~d~~g~Tpl~ 138 (153)
T d1awcb_ 67 DRTPLHMAASEGHANIVEVLLKHGADVN---AKDMLKMTALHWATEHNHQEVVELLIK-----YGADVHTQSKFCKTAFD 138 (153)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHTTTCCTT---CCCTTSCCHHHHHHHTTCHHHHHHHHH-----TTCCTTCCCTTSCCHHH
T ss_pred cccccccccccccceeeecccccCCccc---cccccCchHHHhhhhcchhheeeeccc-----cccCCcccCCCCCCHHH
Confidence 7899999999999999999999999998 899999999999999999999999988 68899999999999999
Q ss_pred HHHHcCCC
Q 039985 262 HVADMKHY 269 (357)
Q Consensus 262 ~Aa~~g~~ 269 (357)
+|+..|+.
T Consensus 139 ~A~~~g~~ 146 (153)
T d1awcb_ 139 ISIDNGNE 146 (153)
T ss_dssp HHHHTTCH
T ss_pred HHHHcCCH
Confidence 99999983
|
| >d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Cell cycle inhibitor p19ink4D species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=3.4e-26 Score=189.84 Aligned_cols=142 Identities=13% Similarity=0.141 Sum_probs=128.3
Q ss_pred CHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCcCc
Q 039985 103 STISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNWAI 182 (357)
Q Consensus 103 t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~G 182 (357)
++||.||..|+.++|+.|++.+..+ ++..|..|.| |||+|+. |+.+++++|++++.+++ .++..|
T Consensus 4 ~~L~~Aa~~g~~~~vk~lL~~~~~~------~n~~d~~g~t-~L~~A~~-~~~~~v~~Ll~~~~~~~-------~~~~~~ 68 (156)
T d1bd8a_ 4 DRLSGAAARGDVQEVRRLLHRELVH------PDALNRFGKT-ALQVMMF-GSTAIALELLKQGASPN-------VQDTSG 68 (156)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCC------TTCCCTTSCC-HHHHSCT-TCHHHHHHHHHTTCCTT-------CCCTTS
T ss_pred HHHHHHHHcCCHHHHHHHHHhCCCC------CCccCCCCCc-ccccccc-ccccccccccccccccc-------cccccc
Confidence 4699999999999999999875431 5678999999 9999874 88999999999999887 445569
Q ss_pred chHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcHHHH
Q 039985 183 RLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTLLHH 262 (357)
Q Consensus 183 ~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLh~ 262 (357)
.+||+.|+..++.++++++++++++++ .+|..|+||||+|+..|+.+++++|+. +++++.+|.+|+||||+
T Consensus 69 ~~~l~~~~~~~~~~~~~~~l~~~~~~n---~~~~~~~t~L~~A~~~~~~~i~~~L~~------~~~~~~~d~~G~TpL~~ 139 (156)
T d1bd8a_ 69 TSPVHDAARTGFLDTLKVLVEHGADVN---VPDGTGALPIHLAVQEGHTAVVSFLAA------ESDLHRRDARGLTPLEL 139 (156)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCSC---CCCTTSCCHHHHHHHHTCHHHHHHHHT------TSCTTCCCTTSCCHHHH
T ss_pred ccccccccccccccccccccccccccc---cccCCCCeeeccccccccccccccccc------cccccccCCCCCCHHHH
Confidence 999999999999999999999999998 899999999999999999999999863 56889999999999999
Q ss_pred HHHcCC
Q 039985 263 VADMKH 268 (357)
Q Consensus 263 Aa~~g~ 268 (357)
|++.|+
T Consensus 140 A~~~g~ 145 (156)
T d1bd8a_ 140 ALQRGA 145 (156)
T ss_dssp HHHSCC
T ss_pred HHHcCC
Confidence 999997
|
| >d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Ankyrin-R species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.93 E-value=3e-26 Score=217.32 Aligned_cols=148 Identities=13% Similarity=0.135 Sum_probs=137.7
Q ss_pred CCCCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccC
Q 039985 98 SPANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKD 177 (357)
Q Consensus 98 ~~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~ 177 (357)
...|.||||.|+..++.++++.+++.... .+..+..|.| ||+.|+..++.+++++|+++|++++ .
T Consensus 228 ~~~~~t~l~~a~~~~~~~~~~~~~~~~~~-------~~~~~~~g~~-~l~~a~~~~~~~i~~~Ll~~g~~~~-------~ 292 (408)
T d1n11a_ 228 SVQGVTPLHLAAQEGHAEMVALLLSKQAN-------GNLGNKSGLT-PLHLVAQEGHVPVADVLIKHGVMVD-------A 292 (408)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHTTTCC-------TTCCCTTCCC-HHHHHHHHTCHHHHHHHHHHTCCTT-------C
T ss_pred CCCCCCHHHHHHHhCcHhHhhhhhccccc-------cccccCCCCC-hhhhhhhcCcHHHHHHHHHCCCccc-------c
Confidence 44588999999999999999999998887 6678899999 9999999999999999999999987 3
Q ss_pred CCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCC
Q 039985 178 KNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGY 257 (357)
Q Consensus 178 ~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~ 257 (357)
.+..+.||||.|+..++.++++.+++.|++++ .+|.+|+||||+|+++|+.++|++|++ .|+++|.+|.+|+
T Consensus 293 ~~~~~~t~L~~~~~~~~~~~~~~ll~~g~~in---~~d~~G~T~Lh~A~~~g~~~iv~~Ll~-----~GAd~n~~d~~G~ 364 (408)
T d1n11a_ 293 TTRMGYTPLHVASHYGNIKLVKFLLQHQADVN---AKTKLGYSPLHQAAQQGHTDIVTLLLK-----NGASPNEVSSDGT 364 (408)
T ss_dssp CCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTT---CCCTTSCCHHHHHHHTTCHHHHHHHHH-----TTCCSCCCCSSSC
T ss_pred ccccccccchhhcccCcceeeeeecccccccc---ccCCCCCCHHHHHHHcCCHHHHHHHHH-----CCCCCCCCCCCCC
Confidence 44458999999999999999999999999998 999999999999999999999999998 7889999999999
Q ss_pred cHHHHHHHcCC
Q 039985 258 TLLHHVADMKH 268 (357)
Q Consensus 258 TpLh~Aa~~g~ 268 (357)
||||+|++.|+
T Consensus 365 t~L~~A~~~~~ 375 (408)
T d1n11a_ 365 TPLAIAKRLGY 375 (408)
T ss_dssp CHHHHHHHTTC
T ss_pred CHHHHHHHcCC
Confidence 99999999998
|
| >d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Lin-12 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.93 E-value=3.1e-26 Score=206.07 Aligned_cols=215 Identities=11% Similarity=0.078 Sum_probs=157.1
Q ss_pred cHHHHHHHHHhhhhcccC-CCCCCCcCcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
Q 039985 28 NANKLLKKLVKEETLCLG-DGEQNPEISLLSPESSSTSLPNPEISSSNPESSTSSLPNPEIFSPDPESSTTSPANISTIS 106 (357)
Q Consensus 28 ~~~~iv~~Ll~~~~~~~d-~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~Lh 106 (357)
++.+|++.|.+.+.+..| ..|+||++.+..-... +.......... ........+.+..+..|+||||
T Consensus 12 ~~~~~~~~l~~~~~n~~~~~~g~T~Lh~A~~~g~~-------~~v~~Ll~~~~-----~~~l~~Gadvn~~d~~G~TpLh 79 (277)
T d2fo1e1 12 GSYAITEPITRESVNIIDPRHNRTVLHWIASNSSA-------EKSEDLIVHEA-----KECIAAGADVNAMDCDENTPLM 79 (277)
T ss_dssp SSSCCCSCCSTTTTTTCCCSSCCCHHHHHHCTTCC-------SCCTTHHHHHH-----HHHHHTCCCTTCCCTTSCCHHH
T ss_pred CCHHHHHHHHhcCCCcCCCCCCccHHHHHHHcCCH-------HHHHHHHhcch-----hHHHHcCCCccccCCCCCeeec
Confidence 334566777777777555 4699999865443331 11100000000 0000011233445567999999
Q ss_pred HHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCC---CCC--------------
Q 039985 107 LGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDC---TIK-------------- 169 (357)
Q Consensus 107 ~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~---~~~-------------- 169 (357)
+|+..|+.+++++|++.|++ ++..|.+|.| ||++|+..++.++++.+...+. .++
T Consensus 80 ~A~~~g~~~iv~~Ll~~Gad-------~n~~~~~g~t-~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (277)
T d2fo1e1 80 LAVLARRRRLVAYLMKAGAD-------PTIYNKSERS-ALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVA 151 (277)
T ss_dssp HHHHHTCHHHHHHHHHTTCC-------SCCCCTTCCC-HHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHH
T ss_pred cccccccccccccccccccc-------cccccccccc-cccchhhhcchhhhhhhhhcccccccccccccccchhHHHHH
Confidence 99999999999999999998 7788999999 9999999999999998876532 000
Q ss_pred -----------------------CCCCCccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHH
Q 039985 170 -----------------------GVPNHKKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAV 226 (357)
Q Consensus 170 -----------------------~~~~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~ 226 (357)
......+..+..|.||||+++..|+.+++++++....... ..+|..|+||||+|+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~~~~~~~~~~~~~~l~~~~~~~--~~~d~~g~tpL~~A~ 229 (277)
T d2fo1e1 152 HNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNK--DKQDEDGKTPIMLAA 229 (277)
T ss_dssp HSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCT--TCCCTTCCCHHHHHH
T ss_pred hcccccccccccccccccccccccccccccccccCCCCccccccccccccccccccccccccc--cccCCCCCCHHHHHH
Confidence 0001111335569999999999999999998766544444 489999999999999
Q ss_pred HcCCHHHHHHHHhhhccCCccccccccCCCCcHHHHHHHcCCC
Q 039985 227 KRRQYKVFELITKEMQLSVPKWASRIDKKGYTLLHHVADMKHY 269 (357)
Q Consensus 227 ~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~ 269 (357)
..|+.++|++|++ .+++++.+|.+|+||||+|++.|+.
T Consensus 230 ~~g~~~iv~~Ll~-----~gadin~~d~~G~T~L~~A~~~~~~ 267 (277)
T d2fo1e1 230 QEGRIEVVMYLIQ-----QGASVEAVDATDHTARQLAQANNHH 267 (277)
T ss_dssp HHTCHHHHHHHHH-----TTCCSSCCCSSSCCHHHHHHHTTCH
T ss_pred HcCCHHHHHHHHH-----CcCCCCCcCCCCCCHHHHHHHcCCH
Confidence 9999999999998 6889999999999999999999973
|
| >d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.93 E-value=8.8e-26 Score=197.95 Aligned_cols=153 Identities=14% Similarity=0.029 Sum_probs=99.5
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCc
Q 039985 101 NISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNW 180 (357)
Q Consensus 101 g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~ 180 (357)
|.||||+|+..|+.+++++|++.+++ ++. ....+..|.+ |+|+++..+..++++.++..+...... ..+.
T Consensus 34 G~TpL~~A~~~g~~~iv~~Ll~~ga~-~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 103 (229)
T d1ixva_ 34 GRIPLHWSVSFQAHEITSFLLSKMEN-VNL---DDYPDDSGWT-PFHIACSVGNLEVVKSLYDRPLKPDLN-----KITN 103 (229)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHTTCTT-CCG---GGCCCTTSCC-HHHHHHHHTCHHHHHHHHSSSSCCCTT-----CCCT
T ss_pred CCCHHHHHHHcCCccccchhhhhhcc-ccc---cccccccccc-ccccccccccccccccccccccccccc-----cccc
Confidence 66777777777777777777777664 111 2245566677 777777777777777777666544321 2233
Q ss_pred CcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcHH
Q 039985 181 AIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTLL 260 (357)
Q Consensus 181 ~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpL 260 (357)
.+.|||+.++..++.+++++|+..+.+.. .+|..|+||||+|+..|+.+++++|+.. ...+++.+|.+|+|||
T Consensus 104 ~~~~~l~~~~~~~~~~~~~~l~~~~~~~~---~~~~~g~t~l~~a~~~~~~~~~~~Ll~~----~~~~in~~d~~g~TpL 176 (229)
T d1ixva_ 104 QGVTCLHLAVGKKWFEVSQFLIENGASVR---IKDKFNQIPLHRAASVGSLKLIELLCGL----GKSAVNWQDKQGWTPL 176 (229)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTCCSC---CCCTTSCCHHHHHHHHTCHHHHHHHHTT----TCCCSCCCCTTSCCHH
T ss_pred ccccccccccccchhhhhhhhhhhccccc---ccCCCCCCccchhhhccccccccccccc----ccccccccccccCCch
Confidence 36677777777777777777777666665 6666777777777777777777777653 3356666777777777
Q ss_pred HHHHHcCCCC
Q 039985 261 HHVADMKHYK 270 (357)
Q Consensus 261 h~Aa~~g~~~ 270 (357)
|+|+..|+.+
T Consensus 177 h~A~~~~~~~ 186 (229)
T d1ixva_ 177 FHALAEGHGD 186 (229)
T ss_dssp HHHHHTTCHH
T ss_pred hhhcccccHH
Confidence 7777666643
|
| >d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: bcl-3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.93 E-value=8.8e-25 Score=188.21 Aligned_cols=180 Identities=13% Similarity=0.088 Sum_probs=129.3
Q ss_pred CCCCHHHHHHhcCCHHHHHHHHh----cCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCc
Q 039985 100 ANISTISLGLGKGNMLKAKKLVD----FSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHK 175 (357)
Q Consensus 100 ~g~t~Lh~A~~~g~~~~vk~Ll~----~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~ 175 (357)
.|.||||+||.+|+.++++.|++ .+.+ .+..|.+|.| |||+|+..|+.+++++|+++|++.+
T Consensus 2 dG~TpLh~A~~~g~~~~v~~Ll~~~~~~g~~-------in~~d~~g~T-pL~~A~~~~~~~iv~~Ll~~ga~~~------ 67 (228)
T d1k1aa_ 2 DGDTPLHIAVVQGNLPAVHRLVNLFQQGGRE-------LDIYNNLRQT-PLHLAVITTLPSVVRLLVTAGASPM------ 67 (228)
T ss_dssp TTCCHHHHHHHTTCHHHHHHHHHHHHHTTCC-------SCCCCTTSCC-HHHHHHHTTCHHHHHHHHHTTCCTT------
T ss_pred CCccHHHHHHHcCCHHHHHHHHHHHHHCCCC-------CCccCCCCCc-cceehhccccccccccccccccccc------
Confidence 49999999999999999999885 5555 6678999999 9999999999999999999999876
Q ss_pred cCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCccc-c----------------------------------cccCCCCCh
Q 039985 176 KDKNWAIRLTLLFAASNGITEILKEIIHQHPQAIL-L----------------------------------DNLNEKEQN 220 (357)
Q Consensus 176 ~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~-~----------------------------------~~~d~~G~T 220 (357)
..+..|.++++.|...++.++++.+......... . ...+..|.+
T Consensus 68 -~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 146 (228)
T d1k1aa_ 68 -ALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRS 146 (228)
T ss_dssp -CCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCC
T ss_pred -ccccccccccccccccccccchhhhhhccccccccccccccccccccccccccccchhhhhhhccccccccccccchhh
Confidence 3334477888888888888777776654432210 0 233344555
Q ss_pred HHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcHHHHHHHcCCCCCCCCCCChhHHHHHhhhHHHHHHhcc-Ccc
Q 039985 221 ILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTLLHHVADMKHYKEGTRPGPVLQFQEELQLFEHVKEIMP-RHY 299 (357)
Q Consensus 221 pLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~~~~~t~L~la~~l~~~~~v~~ll~-~~~ 299 (357)
|||.|+..+...+++.++. .+...+.+|..|+||||+|+..|+ .+.++.|+. +.+
T Consensus 147 ~l~~a~~~~~~~~~~~~~~-----~~~~~~~~d~~g~t~L~~A~~~g~-------------------~~~v~~Ll~~Gad 202 (228)
T d1k1aa_ 147 PLIHAVENNSLSMVQLLLQ-----HGANVNAQMYSGSSALHSASGRGL-------------------LPLVRTLVRSGAD 202 (228)
T ss_dssp HHHHHHHTTCHHHHHHHHH-----TTCCTTCBCTTSCBHHHHHHHHTC-------------------HHHHHHHHHTTCC
T ss_pred HHHHHHHhhhhhhhhhhhh-----hccccccccccCcchHHHHHHcCC-------------------HHHHHHHHHCCCC
Confidence 5555555555555555554 344555555555555555555554 556777774 348
Q ss_pred cccccccCCCCHHHHHhhhh
Q 039985 300 AMHRDEKNKMTASDLFNLTH 319 (357)
Q Consensus 300 ~~~~n~~g~~Tp~dl~~~~~ 319 (357)
++.+|.+|. ||+++|.+..
T Consensus 203 ~n~~d~~G~-TpL~~A~~~~ 221 (228)
T d1k1aa_ 203 SSLKNCHND-TPLMVARSRR 221 (228)
T ss_dssp TTCCCTTSC-CTTTTCSSHH
T ss_pred CCCCCCCCC-CHHHHHHhCC
Confidence 899999999 9999997533
|
| >d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Cell cycle inhibitor p16ink4A species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.93 E-value=3.3e-26 Score=183.31 Aligned_cols=120 Identities=12% Similarity=0.099 Sum_probs=109.6
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCc
Q 039985 101 NISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNW 180 (357)
Q Consensus 101 g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~ 180 (357)
+.++||+|+.+|+.++|++|++.+++ ++..|..|.| |||+|+ .|+.+++++|+++|++++ .++.
T Consensus 3 ~~~~L~~Aa~~G~~~~v~~Ll~~gad-------~n~~~~~g~t-~l~~a~-~g~~~~v~~Ll~~ga~~~-------~~~~ 66 (125)
T d1bi7b_ 3 SADWLATAAARGRVEEVRALLEAGAN-------PNAPNSYGRR-PIQVMM-MGSARVAELLLLHGAEPN-------CADP 66 (125)
T ss_dssp STTHHHHHHHHTCHHHHHHHHTTTCC-------TTCCCSSSCC-TTTSSC-TTCHHHHHHHHTTTCCCC-------CCCT
T ss_pred ChhHHHHHHHCCCHHHHHHHHHcCCc-------cccccccccc-cccccc-cccccccccccccccccc-------cccc
Confidence 56899999999999999999999988 7789999999 999775 799999999999999987 3333
Q ss_pred Cc-chHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHh
Q 039985 181 AI-RLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITK 239 (357)
Q Consensus 181 ~G-~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~ 239 (357)
.| .||||+||+.|+.+++++|+++|+++. .+|..|+||||+|+++|+.+++++|++
T Consensus 67 ~~~~~~L~~A~~~g~~~~v~~Ll~~ga~~~---~~d~~G~T~l~~A~~~g~~~~v~~Lls 123 (125)
T d1bi7b_ 67 ATLTRPVHDAAREGFLDTLVVLHRAGARLD---VRDAWGRLPVDLAEELGHRDVARYLRA 123 (125)
T ss_dssp TTCCCHHHHHHHHTCHHHHHHHHHHTCCSS---CCCTTCCCHHHHHHHHTCHHHHHHHSS
T ss_pred cccccccccccccccccccccccccccccc---cccCCCCCHHHHHHHcCCHHHHHHHHh
Confidence 34 479999999999999999999999998 999999999999999999999999964
|
| >d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Ankyrin-R species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.92 E-value=5e-24 Score=201.89 Aligned_cols=180 Identities=15% Similarity=0.130 Sum_probs=118.6
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCc
Q 039985 101 NISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNW 180 (357)
Q Consensus 101 g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~ 180 (357)
|.||||.++...+.++...++..... ....+..|.| |||+|+..+..++++.++..+...+ ..+.
T Consensus 198 ~~t~l~~~~~~~~~~~~~~l~~~~~~-------~~~~~~~~~t-~l~~a~~~~~~~~~~~~~~~~~~~~-------~~~~ 262 (408)
T d1n11a_ 198 GYTPLHIAAKQNQVEVARSLLQYGGS-------ANAESVQGVT-PLHLAAQEGHAEMVALLLSKQANGN-------LGNK 262 (408)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCC-------TTCCCTTCCC-HHHHHHHTTCHHHHHHHHTTTCCTT-------CCCT
T ss_pred CCCcchhhhccchhhhhhhhhhcccc-------ccccCCCCCC-HHHHHHHhCcHhHhhhhhccccccc-------cccC
Confidence 45555555555555555555544444 3334556666 6777766666677666666665554 3344
Q ss_pred CcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcHH
Q 039985 181 AIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTLL 260 (357)
Q Consensus 181 ~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpL 260 (357)
.|.||||.|+..++.+++++|+++|+++. ..+..+.||||.|+..++.++++++++ .+.++|.+|.+|+|||
T Consensus 263 ~g~~~l~~a~~~~~~~i~~~Ll~~g~~~~---~~~~~~~t~L~~~~~~~~~~~~~~ll~-----~g~~in~~d~~G~T~L 334 (408)
T d1n11a_ 263 SGLTPLHLVAQEGHVPVADVLIKHGVMVD---ATTRMGYTPLHVASHYGNIKLVKFLLQ-----HQADVNAKTKLGYSPL 334 (408)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHHTCCTT---CCCSSCCCHHHHHHHSSCSHHHHHHHH-----TTCCTTCCCTTSCCHH
T ss_pred CCCChhhhhhhcCcHHHHHHHHHCCCccc---cccccccccchhhcccCcceeeeeecc-----ccccccccCCCCCCHH
Confidence 46677777777777777777777777666 666666777777777777777777765 4566677777777777
Q ss_pred HHHHHcCCCCCCCCCCChhHHHHHhhhHHHHHHhcc-CcccccccccCCCCHHHHHhhh-hHHHH
Q 039985 261 HHVADMKHYKEGTRPGPVLQFQEELQLFEHVKEIMP-RHYAMHRDEKNKMTASDLFNLT-HEDQL 323 (357)
Q Consensus 261 h~Aa~~g~~~~~~~~~t~L~la~~l~~~~~v~~ll~-~~~~~~~n~~g~~Tp~dl~~~~-~~~~~ 323 (357)
|+|++.|+ .+.|+.|+. +++++.+|++|+ ||+++|.+. |.+.+
T Consensus 335 h~A~~~g~-------------------~~iv~~Ll~~GAd~n~~d~~G~-t~L~~A~~~~~~~iv 379 (408)
T d1n11a_ 335 HQAAQQGH-------------------TDIVTLLLKNGASPNEVSSDGT-TPLAIAKRLGYISVT 379 (408)
T ss_dssp HHHHHTTC-------------------HHHHHHHHHTTCCSCCCCSSSC-CHHHHHHHTTCHHHH
T ss_pred HHHHHcCC-------------------HHHHHHHHHCCCCCCCCCCCCC-CHHHHHHHcCCHHHH
Confidence 77777665 456777774 458899999999 999999865 44433
|
| >d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Myotrophin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.92 E-value=9.5e-26 Score=178.83 Aligned_cols=105 Identities=17% Similarity=0.087 Sum_probs=99.9
Q ss_pred HHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHH
Q 039985 145 KAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHV 224 (357)
Q Consensus 145 pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~ 224 (357)
||++|+..|+.++|++|+++|++++ .++..|+||||+||..|+.+++++|+++|++++ .+|..|+||||+
T Consensus 5 pL~~A~~~g~~~~v~~Ll~~g~d~n-------~~~~~g~t~lh~A~~~~~~~~~~~ll~~g~din---~~d~~g~tpLh~ 74 (118)
T d1myoa_ 5 EFMWALKNGDLDEVKDYVAKGEDVN-------RTLEGGRKPLHYAADCGQLEILEFLLLKGADIN---APDKHHITPLLS 74 (118)
T ss_dssp HHHHHHHTTCHHHHHHHHTTTCCCC-------CCSSSSCCTTHHHHHHSTTTHHHHHHHSSCTTT---CCSSSCSCHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHhhhccc-------cccccccccccccccccccccccccccccceee---ecccccccchhh
Confidence 9999999999999999999999987 566679999999999999999999999999998 999999999999
Q ss_pred HHHcCCHHHHHHHHhhhccCCccccccccCCCCcHHHHHH
Q 039985 225 AVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTLLHHVA 264 (357)
Q Consensus 225 A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa 264 (357)
|+.+|+.+++++|++ .|++++.+|.+|+||||+|.
T Consensus 75 A~~~~~~~~v~~Ll~-----~Gad~~~~d~~G~t~l~~a~ 109 (118)
T d1myoa_ 75 AVYEGHVSCVKLLLS-----KGADKTVKGPDGLTALEATD 109 (118)
T ss_dssp HHTTTCCHHHHHHHT-----TCCCSSSSSSSTCCCCCTCS
T ss_pred hhhcCchhhhhhhhc-----ccccceeeCCCCCCHHHHHh
Confidence 999999999999988 68899999999999999984
|
| >d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Myotrophin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.91 E-value=7.7e-26 Score=179.36 Aligned_cols=107 Identities=15% Similarity=0.130 Sum_probs=101.1
Q ss_pred CCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCcC
Q 039985 102 ISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNWA 181 (357)
Q Consensus 102 ~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~ 181 (357)
.|||++|+++|+.++++.|++.+++ .+..|..|.| |||+|+..|+.+++++|+++|++++ .+|..
T Consensus 3 ~tpL~~A~~~g~~~~v~~Ll~~g~d-------~n~~~~~g~t-~lh~A~~~~~~~~~~~ll~~g~din-------~~d~~ 67 (118)
T d1myoa_ 3 DKEFMWALKNGDLDEVKDYVAKGED-------VNRTLEGGRK-PLHYAADCGQLEILEFLLLKGADIN-------APDKH 67 (118)
T ss_dssp HHHHHHHHHTTCHHHHHHHHTTTCC-------CCCCSSSSCC-TTHHHHHHSTTTHHHHHHHSSCTTT-------CCSSS
T ss_pred ChHHHHHHHCCCHHHHHHHHHhhhc-------cccccccccc-cccccccccccccccccccccceee-------ecccc
Confidence 3799999999999999999999998 7788999999 9999999999999999999999987 56667
Q ss_pred cchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHH
Q 039985 182 IRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAV 226 (357)
Q Consensus 182 G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~ 226 (357)
|+||||+|+.+|+.++|++|+++|++++ .+|.+|+||||+|.
T Consensus 68 g~tpLh~A~~~~~~~~v~~Ll~~Gad~~---~~d~~G~t~l~~a~ 109 (118)
T d1myoa_ 68 HITPLLSAVYEGHVSCVKLLLSKGADKT---VKGPDGLTALEATD 109 (118)
T ss_dssp CSCHHHHHHTTTCCHHHHHHHTTCCCSS---SSSSSTCCCCCTCS
T ss_pred cccchhhhhhcCchhhhhhhhcccccce---eeCCCCCCHHHHHh
Confidence 9999999999999999999999999998 99999999999983
|
| >d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: 53BP2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.91 E-value=1.5e-24 Score=174.74 Aligned_cols=120 Identities=10% Similarity=0.052 Sum_probs=108.7
Q ss_pred CHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCcCc
Q 039985 103 STISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNWAI 182 (357)
Q Consensus 103 t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~G 182 (357)
++||.||..|+.++|+.|++.+++ ++.+|.+|+| |||+|+..|+.+++++|++.|++++ .+|.+|
T Consensus 3 ~lL~~A~~~G~~~~v~~Ll~~g~d-------~n~~d~~g~t-~Lh~A~~~~~~~~~~~ll~~g~~~~-------~~d~~g 67 (130)
T d1ycsb1 3 ALLLDSSLEGEFDLVQRIIYEVDD-------PSLPNDEGIT-ALHNAVCAGHTEIVKFLVQFGVNVN-------AADSDG 67 (130)
T ss_dssp HHHHHHHHHTCHHHHHHHTSTTSS-------CCCCCTTSCC-HHHHHHHHTCHHHHHHHHHHTCCTT-------CCCTTC
T ss_pred HHHHHHHHcCCHHHHHHHHHcCCC-------cccccccccc-ccccccccccccccccccccccccc-------cccccC
Confidence 579999999999999999999998 7889999999 9999999999999999999999987 566679
Q ss_pred chHHHHHHHCCCHHHHHHHHhhCCCcccccccC-CCCChHHHHH--HHcCCHHHHHHHHhh
Q 039985 183 RLTLLFAASNGITEILKEIIHQHPQAILLDNLN-EKEQNILHVA--VKRRQYKVFELITKE 240 (357)
Q Consensus 183 ~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d-~~G~TpLh~A--~~~g~~~iv~~Ll~~ 240 (357)
+||||+||.+|+.++|++|+++|++++ ..+ ..|+||++++ +..|+.+++++|+..
T Consensus 68 ~tpLh~A~~~g~~~~v~~Ll~~ga~v~---~~~~~~~~~~~~~~~a~~~g~~eiv~~L~~~ 125 (130)
T d1ycsb1 68 WTPLHCAASCNNVQVCKFLVESGAAVF---AMTYSDMQTAADKCEEMEEGYTQCSQFLYGV 125 (130)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTT---CCCSSSCCCHHHHCCSSSTTCCCHHHHHHHH
T ss_pred cccccccchhhHHHHHHHHHHcCCCcc---cccCCCCCCHHHHHHHHHcChHHHHHHHHhH
Confidence 999999999999999999999999998 554 5688887765 577999999999763
|
| >d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Cell cycle inhibitor p16ink4A species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.90 E-value=2.7e-24 Score=172.02 Aligned_cols=112 Identities=9% Similarity=0.024 Sum_probs=101.8
Q ss_pred CCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCC-
Q 039985 141 GNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQ- 219 (357)
Q Consensus 141 g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~- 219 (357)
+.+ +||+|+..|+.++|++|+++|++++ .+|..|.||||+|+ .|+.+++++|+++|++++ .+|..|.
T Consensus 3 ~~~-~L~~Aa~~G~~~~v~~Ll~~gad~n-------~~~~~g~t~l~~a~-~g~~~~v~~Ll~~ga~~~---~~~~~~~~ 70 (125)
T d1bi7b_ 3 SAD-WLATAAARGRVEEVRALLEAGANPN-------APNSYGRRPIQVMM-MGSARVAELLLLHGAEPN---CADPATLT 70 (125)
T ss_dssp STT-HHHHHHHHTCHHHHHHHHTTTCCTT-------CCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCC---CCCTTTCC
T ss_pred Chh-HHHHHHHCCCHHHHHHHHHcCCccc-------cccccccccccccc-cccccccccccccccccc---cccccccc
Confidence 456 9999999999999999999999987 56667999999775 799999999999999998 7888776
Q ss_pred hHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcHHHHHHHcCCC
Q 039985 220 NILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTLLHHVADMKHY 269 (357)
Q Consensus 220 TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~ 269 (357)
||||+|+++|+.+++++|++ .+++++.+|.+|+||||+|++.|+.
T Consensus 71 ~~L~~A~~~g~~~~v~~Ll~-----~ga~~~~~d~~G~T~l~~A~~~g~~ 115 (125)
T d1bi7b_ 71 RPVHDAAREGFLDTLVVLHR-----AGARLDVRDAWGRLPVDLAEELGHR 115 (125)
T ss_dssp CHHHHHHHHTCHHHHHHHHH-----HTCCSSCCCTTCCCHHHHHHHHTCH
T ss_pred cccccccccccccccccccc-----cccccccccCCCCCHHHHHHHcCCH
Confidence 69999999999999999998 6789999999999999999999973
|
| >d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: GA bindinig protein (GABP) beta 1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.90 E-value=2.1e-23 Score=171.48 Aligned_cols=119 Identities=13% Similarity=0.188 Sum_probs=110.7
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCc
Q 039985 101 NISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNW 180 (357)
Q Consensus 101 g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~ 180 (357)
|.||||+|+..++.++++.++..... ....+..+.+ +++.++...+.+++++|+.++++.. .++.
T Consensus 34 g~t~L~~a~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~-------~~~~ 98 (153)
T d1awcb_ 34 GTSPLHLAAQYGHFSTTEVLLRAGVS-------RDARTKVDRT-PLHMAASEGHANIVEVLLKHGADVN-------AKDM 98 (153)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHTTTCC-------TTCCCTTCCC-HHHHHHHHTCHHHHHHHHTTTCCTT-------CCCT
T ss_pred CCcccccccccccccccccccccccc-------cccccccccc-ccccccccccceeeecccccCCccc-------cccc
Confidence 77999999999999999999998887 5567788889 9999999999999999999998876 5566
Q ss_pred CcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHH
Q 039985 181 AIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELI 237 (357)
Q Consensus 181 ~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~L 237 (357)
.|+||||+||..|+.++|++|+++|++++ .+|.+|+||||+|+.+|+.+++++|
T Consensus 99 ~g~T~L~~A~~~g~~~iv~~ll~~gad~~---~~d~~g~Tpl~~A~~~g~~eiv~lL 152 (153)
T d1awcb_ 99 LKMTALHWATEHNHQEVVELLIKYGADVH---TQSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTCCTT---CCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred cCchHHHhhhhcchhheeeeccccccCCc---ccCCCCCCHHHHHHHcCCHHHHHhC
Confidence 79999999999999999999999999998 9999999999999999999999987
|
| >d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Cell cycle inhibitor p19ink4D species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.90 E-value=1.4e-23 Score=173.78 Aligned_cols=121 Identities=11% Similarity=0.151 Sum_probs=110.7
Q ss_pred CCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCC
Q 039985 100 ANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKN 179 (357)
Q Consensus 100 ~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~ 179 (357)
.|+||||+|+ .|+.++++.|++.+.+ .+..+..|.+ |++.++..++.+++++++++|++++ .+|
T Consensus 35 ~g~t~L~~A~-~~~~~~v~~Ll~~~~~-------~~~~~~~~~~-~l~~~~~~~~~~~~~~~l~~~~~~n-------~~~ 98 (156)
T d1bd8a_ 35 FGKTALQVMM-FGSTAIALELLKQGAS-------PNVQDTSGTS-PVHDAARTGFLDTLKVLVEHGADVN-------VPD 98 (156)
T ss_dssp TSCCHHHHSC-TTCHHHHHHHHHTTCC-------TTCCCTTSCC-HHHHHHHTTCHHHHHHHHHTTCCSC-------CCC
T ss_pred CCCccccccc-cccccccccccccccc-------cccccccccc-ccccccccccccccccccccccccc-------ccc
Confidence 3889999987 5899999999999888 6778889999 9999999999999999999999887 555
Q ss_pred cCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhh
Q 039985 180 WAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKE 240 (357)
Q Consensus 180 ~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~ 240 (357)
..|.||||+||+.|+.+++++|+ .|+++. .+|.+|+||||+|+..|+.+++++|+++
T Consensus 99 ~~~~t~L~~A~~~~~~~i~~~L~-~~~~~~---~~d~~G~TpL~~A~~~g~~~iv~~Ll~h 155 (156)
T d1bd8a_ 99 GTGALPIHLAVQEGHTAVVSFLA-AESDLH---RRDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHHH-TTSCTT---CCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred CCCCeeecccccccccccccccc-cccccc---ccCCCCCCHHHHHHHcCCHHHHHHHHhh
Confidence 66999999999999999999887 688887 9999999999999999999999999864
|
| >d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Swi6 ankyrin-repeat fragment species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.90 E-value=3.5e-24 Score=196.76 Aligned_cols=144 Identities=13% Similarity=0.113 Sum_probs=114.1
Q ss_pred CCCCCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcH-------HHHHHHHHcCCCCCC
Q 039985 98 SPANISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAA-------ELVELFVKKDCTIKG 170 (357)
Q Consensus 98 ~~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~-------~iv~~Ll~~g~~~~~ 170 (357)
+..|+||||+||..|+.++|++|++.+++ .+.+|..|+| |||.|+..++. +++++|.. .+.
T Consensus 104 D~~G~T~LH~Aa~~g~~~~v~~Ll~~gad-------~~~~d~~G~T-pL~~A~~~~~~~~~~~~~~ll~~l~~---~~~- 171 (301)
T d1sw6a_ 104 DEHGNTPLHWLTSIANLELVKHLVKHGSN-------RLYGDNMGES-CLVKAVKSVNNYDSGTFEALLDYLYP---CLI- 171 (301)
T ss_dssp STTCCCHHHHHHHTTCHHHHHHHHHTTCC-------TTBCCTTCCC-HHHHHHHSSHHHHTTCHHHHHHHHGG---GGG-
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHCCCC-------CCcCCccccc-HHHHhhhcccchhhhhHHHHHHHHhh---hhh-
Confidence 45699999999999999999999999998 7889999999 99999987752 44444432 222
Q ss_pred CCCCccCCCcCcchHHHHHHHCCC----HH--------HHHHHHhhCCCcc-----------------------------
Q 039985 171 VPNHKKDKNWAIRLTLLFAASNGI----TE--------ILKEIIHQHPQAI----------------------------- 209 (357)
Q Consensus 171 ~~~~~~~~~~~G~TpLh~Aa~~G~----~~--------iv~~Ll~~~~~~~----------------------------- 209 (357)
.+|..|+||||+|+..+. .. ++..+++.+....
T Consensus 172 ------~~d~~g~t~lh~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (301)
T d1sw6a_ 172 ------LEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLK 245 (301)
T ss_dssp ------EECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHH
T ss_pred ------hcccccCCHHHHHHHHhCccccHHHHHHHHHHHHHHHHhcCCcchhcccccccchhHHHHhcchHHHHHHHhhH
Confidence 445569999999886554 22 3334444443210
Q ss_pred -----cccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcHHHHHH
Q 039985 210 -----LLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTLLHHVA 264 (357)
Q Consensus 210 -----~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa 264 (357)
.++.+|.+|+||||+||++|+.++|++|++ .+++++.+|++|.||||+|+
T Consensus 246 ~~~~~~in~~D~~G~TpLh~A~~~g~~~iv~~Ll~-----~GAd~~~~n~~G~Tpl~~A~ 300 (301)
T d1sw6a_ 246 WIIANMLNAQDSNGDTCLNIAARLGNISIVDALLD-----YGADPFIANKSGLRPVDFGA 300 (301)
T ss_dssp HHHHHTTTCCCTTSCCHHHHHHHHCCHHHHHHHHH-----TTCCTTCCCTTSCCGGGGTC
T ss_pred HHHhcCccCCCCCCCCHHHHHHHcCCHHHHHHHHH-----CCCCCCCCCCCCCCHHHHcC
Confidence 014789999999999999999999999998 78999999999999999996
|
| >d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: bcl-3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.90 E-value=2.6e-23 Score=178.84 Aligned_cols=152 Identities=11% Similarity=0.017 Sum_probs=125.7
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCC--------
Q 039985 101 NISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVP-------- 172 (357)
Q Consensus 101 g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~-------- 172 (357)
|.||||+|+..|+.++++.|++.++. .+..+..|.+ +++.|...++.++++.+...........
T Consensus 40 g~TpL~~A~~~~~~~iv~~Ll~~ga~-------~~~~~~~~~~-~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (228)
T d1k1aa_ 40 RQTPLHLAVITTLPSVVRLLVTAGAS-------PMALDRHGQT-AAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGL 111 (228)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCC-------TTCCCTTSCC-HHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSC
T ss_pred CCccceehhccccccccccccccccc-------cccccccccc-ccccccccccccchhhhhhccccccccccccccccc
Confidence 77999999999999999999999887 5566777777 8888877777777777666432111000
Q ss_pred -----------------------CCccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcC
Q 039985 173 -----------------------NHKKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRR 229 (357)
Q Consensus 173 -----------------------~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g 229 (357)
.........|.+|||.|+..+...+++.+++++.+.. .+|..|.||||+|+..|
T Consensus 112 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~---~~d~~g~t~L~~A~~~g 188 (228)
T d1k1aa_ 112 TALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVN---AQMYSGSSALHSASGRG 188 (228)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT---CBCTTSCBHHHHHHHHT
T ss_pred cccccccccccchhhhhhhccccccccccccchhhHHHHHHHhhhhhhhhhhhhhccccc---cccccCcchHHHHHHcC
Confidence 0001234468999999999999999999999999988 89999999999999999
Q ss_pred CHHHHHHHHhhhccCCccccccccCCCCcHHHHHHHcCC
Q 039985 230 QYKVFELITKEMQLSVPKWASRIDKKGYTLLHHVADMKH 268 (357)
Q Consensus 230 ~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~ 268 (357)
+.+++++|++ .|++++.+|.+|+||||+|++.|+
T Consensus 189 ~~~~v~~Ll~-----~Gad~n~~d~~G~TpL~~A~~~~~ 222 (228)
T d1k1aa_ 189 LLPLVRTLVR-----SGADSSLKNCHNDTPLMVARSRRV 222 (228)
T ss_dssp CHHHHHHHHH-----TTCCTTCCCTTSCCTTTTCSSHHH
T ss_pred CHHHHHHHHH-----CCCCCCCCCCCCCCHHHHHHhCCC
Confidence 9999999998 688999999999999999998886
|
| >d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Pseudo ankyrin repeat-like family: Pseudo ankyrin repeat domain: Hypothetical protein LPG2416 species: Legionella pneumophila [TaxId: 446]
Probab=99.90 E-value=1.2e-25 Score=210.95 Aligned_cols=160 Identities=8% Similarity=-0.032 Sum_probs=113.0
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCc
Q 039985 101 NISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNW 180 (357)
Q Consensus 101 g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~ 180 (357)
|+||||+||++|+.++|++|++.+++ ......+.+|.| |||+|+..||.++|++|++.|+...... ..+.
T Consensus 126 g~taL~~Aa~~G~~~~v~~Ll~~g~~-----~~~~~~~~~g~t-~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~----~~~~ 195 (346)
T d2ajaa1 126 NYQAFRLAAENGHLHVLNRLCELAPT-----EIMAMIQAENYH-AFRLAAENGHLHVLNRLCELAPTEATAM----IQAE 195 (346)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHSCTT-----THHHHHSHHHHH-HHHHHHHTTCHHHHHHHHHSCGGGHHHH----HHHH
T ss_pred CCCHHHHHHHCCCHHHHHHHHHcCCC-----ccccccccCCCC-hhHHHHHHhhHHHHHHHHHcCCcccccc----cccC
Confidence 66899999999999999999998887 112233456888 9999999999999999999887643110 1223
Q ss_pred CcchHHHHHHHCCCHHHHHHHHhhCCCcccc------------------------------cccCC--------------
Q 039985 181 AIRLTLLFAASNGITEILKEIIHQHPQAILL------------------------------DNLNE-------------- 216 (357)
Q Consensus 181 ~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~------------------------------~~~d~-------------- 216 (357)
.|.||||.|+++||.++|++|+++|+++..- .....
T Consensus 196 ~~~t~l~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~ 275 (346)
T d2ajaa1 196 NYYAFRWAAVGRGHHNVINFLLDCPVMLAYAEIHEFEYGEKYVNPFIARHVNRLKEMHDAFKLSNPDGVFDLVTKSECLQ 275 (346)
T ss_dssp HHHHHHHHHSTTCCHHHHHHHTTSHHHHHHHHHCTTTTTTTTHHHHHHHHHHHHHHHHTTTTTTSSSSCCCCSSHHHHHH
T ss_pred CCcchhhHHhhcCHHHHHHHHHhCCCCcchHHHHHHHcCcHhhhHHHHHhhccchHHHHHHHHhcccccHhHHhcccccc
Confidence 3677888888899999999998876543200 00011
Q ss_pred --CCChHHHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcHHHHHHHcCCCC
Q 039985 217 --KEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTLLHHVADMKHYK 270 (357)
Q Consensus 217 --~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~ 270 (357)
.+.++|+.|+..|+.+++++|++...+......+..+.+|+||||+||+.||.+
T Consensus 276 ~~~~~~~l~~a~~~~~ld~v~~Ll~~~~~~~~~~~~~~~~~g~T~LhlA~~~Gn~e 331 (346)
T d2ajaa1 276 GFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQG 331 (346)
T ss_dssp HHHHHHHHHHHCCGGGHHHHHHHHTSTTTGGGSSCCSSTTCCCHHHHHHHHHTCTT
T ss_pred cchhhhHHHHHhcCChHHHHHHHHhCcChhhhcccccCCCCCCcHHHHHHHcCcHH
Confidence 123678888888888999999875433223344556678999999999999853
|
| >d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: alpha-alpha superhelix superfamily: Pseudo ankyrin repeat-like family: Pseudo ankyrin repeat domain: Hypothetical protein LPG2416 species: Legionella pneumophila [TaxId: 446]
Probab=99.90 E-value=9.8e-26 Score=211.53 Aligned_cols=201 Identities=10% Similarity=-0.029 Sum_probs=139.8
Q ss_pred CCCCHHHHHHhcCCHHHHHH---HHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCcc
Q 039985 100 ANISTISLGLGKGNMLKAKK---LVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKK 176 (357)
Q Consensus 100 ~g~t~Lh~A~~~g~~~~vk~---Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~ 176 (357)
.|.||||+||++|+.++++. |++.++. .+..|.+|.| |||+|+..||.++|++|+++|++++..
T Consensus 89 ~~~t~L~~Aa~~g~~~~~~~~~~L~~~~~~-------in~~~~~g~t-aL~~Aa~~G~~~~v~~Ll~~g~~~~~~----- 155 (346)
T d2ajaa1 89 KSEVICFVAAITGCSSALDTLCLLLTSDEI-------VKVIQAENYQ-AFRLAAENGHLHVLNRLCELAPTEIMA----- 155 (346)
T ss_dssp CHHHHHHHHHHHCCHHHHHHHTTC--CCSS-------CC--CHHHHH-HHHHHHHTTCHHHHHHHHHSCTTTHHH-----
T ss_pred CCCcHHHHHHHhCCHHHHHHHHHHHhCCCc-------ccccCCCCCC-HHHHHHHCCCHHHHHHHHHcCCCcccc-----
Confidence 48899999999999877665 7888887 7778999999 999999999999999999999987621
Q ss_pred CCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCccccccc----
Q 039985 177 DKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRI---- 252 (357)
Q Consensus 177 ~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~---- 252 (357)
+.+.+|.||||+||++||.++|++|++.|++....+..+.+|.||||.|+.+||.++|++|++ .+++++..
T Consensus 156 ~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~iv~~Ll~-----~ga~~~~~~~~~ 230 (346)
T d2ajaa1 156 MIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLD-----CPVMLAYAEIHE 230 (346)
T ss_dssp HHSHHHHHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTT-----SHHHHHHHHHCT
T ss_pred ccccCCCChhHHHHHHhhHHHHHHHHHcCCcccccccccCCCcchhhHHhhcCHHHHHHHHHh-----CCCCcchHHHHH
Confidence 122349999999999999999999999998764112455677889999999999999999987 34333322
Q ss_pred ---cCCCCcHHHHHHHcCCCCC------CCCCC-----------------ChhHHHHHhhhHHHHHHhccCcc------c
Q 039985 253 ---DKKGYTLLHHVADMKHYKE------GTRPG-----------------PVLQFQEELQLFEHVKEIMPRHY------A 300 (357)
Q Consensus 253 ---d~~G~TpLh~Aa~~g~~~~------~~~~~-----------------t~L~la~~l~~~~~v~~ll~~~~------~ 300 (357)
...+.++++.+...+..+. ....+ +++..+...+..+.++.++.... .
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~ld~v~~Ll~~~~~~~~~~~ 310 (346)
T d2ajaa1 231 FEYGEKYVNPFIARHVNRLKEMHDAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPT 310 (346)
T ss_dssp TTTTTTTHHHHHHHHHHHHHHHHTTTTTTSSSSCCCCSSHHHHHHHHHHHHHHHHHCCGGGHHHHHHHHTSTTTGGGSSC
T ss_pred HHcCcHhhhHHHHHhhccchHHHHHHHHhcccccHhHHhcccccccchhhhHHHHHhcCChHHHHHHHHhCcChhhhccc
Confidence 2344566666654443210 00000 22333333345566776664321 1
Q ss_pred ccccccCCCCHHHHHhhhh
Q 039985 301 MHRDEKNKMTASDLFNLTH 319 (357)
Q Consensus 301 ~~~n~~g~~Tp~dl~~~~~ 319 (357)
...+.+|. ||+++|.+..
T Consensus 311 ~~~~~~g~-T~LhlA~~~G 328 (346)
T d2ajaa1 311 ATIPGDAN-ELLRLALRLG 328 (346)
T ss_dssp CSSTTCCC-HHHHHHHHHT
T ss_pred ccCCCCCC-cHHHHHHHcC
Confidence 23335688 9999998644
|
| >d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: RNase L, 2-5a-dependent ribonuclease species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.89 E-value=1e-21 Score=176.87 Aligned_cols=199 Identities=16% Similarity=0.118 Sum_probs=149.3
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCc
Q 039985 101 NISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNW 180 (357)
Q Consensus 101 g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~ 180 (357)
|+||||+|+..|+.++++.|++.+.. ....+..+.+ |.++|+..+..+....+++...+.. ..+.
T Consensus 39 g~tpL~~A~~~~~~eiv~~L~~~~~~-------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~ 103 (285)
T d1wdya_ 39 GWTPLHNAVQMSREDIVELLLRHGAD-------PVLRKKNGAT-PFLLAAIAGSVKLLKLFLSKGADVN-------ECDF 103 (285)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCC-------TTCCCTTCCC-HHHHHHHHTCHHHHHHHHHTTCCTT-------CBCT
T ss_pred CCCHHHHHHHcCCHHHhhhhcccccc-------ccccccccch-hhHHHhhcCCccccchhhhhccccc-------cccc
Confidence 77999999999999999999988877 5556667777 8888888888888888887765543 3344
Q ss_pred CcchHHHHHHHCCCHHHHHHHHhhCCCccc-------ccccCCCCChHHHHHHHcCCHHHHHHHHhhhccCCcccccccc
Q 039985 181 AIRLTLLFAASNGITEILKEIIHQHPQAIL-------LDNLNEKEQNILHVAVKRRQYKVFELITKEMQLSVPKWASRID 253 (357)
Q Consensus 181 ~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~-------~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d 253 (357)
.|.|+|++|+..|+..+++.++....+... ....+..|.||||+|+.+|+.+++++|+.+ .+.+++.+|
T Consensus 104 ~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~----~~~~i~~~~ 179 (285)
T d1wdya_ 104 YGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDE----MGADVNACD 179 (285)
T ss_dssp TCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHT----SCCCTTCCC
T ss_pred CCCchhHHHHHhcchhhhhhhhhhcccccccccchhhhhhhcccCchHHHHHHHcCCHHHHHHHHhc----cCCCccccc
Confidence 578888888888888888888877665430 023455688888888888888888888875 456778888
Q ss_pred CCCCcHHHHHHHcCCCC------------------CCCCCCChhHHHHHhhhHHHHHHhcc--CcccccccccCCCCHHH
Q 039985 254 KKGYTLLHHVADMKHYK------------------EGTRPGPVLQFQEELQLFEHVKEIMP--RHYAMHRDEKNKMTASD 313 (357)
Q Consensus 254 ~~G~TpLh~Aa~~g~~~------------------~~~~~~t~L~la~~l~~~~~v~~ll~--~~~~~~~n~~g~~Tp~d 313 (357)
..|.++++.+...+... ....+.|||+.+...+..+.++.++. +.+++.+|.+|. ||++
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~i~~~Li~~ga~~n~~~~~g~t~L~~a~~~~~~~~v~~lL~~~g~din~~d~~G~-TpL~ 258 (285)
T d1wdya_ 180 NMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGK-TALL 258 (285)
T ss_dssp TTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSC-CHHH
T ss_pred CCCCcccccccccccchHHHHHHHHHHHCCCCCCccCCCCCCccchhhhcCcHHHHHHHHHcCCCCCcCCCCCCC-CHHH
Confidence 88888777766555322 12234478888877777788888874 447888999999 9999
Q ss_pred HHhhhh
Q 039985 314 LFNLTH 319 (357)
Q Consensus 314 l~~~~~ 319 (357)
+|.+..
T Consensus 259 ~A~~~~ 264 (285)
T d1wdya_ 259 LAVELK 264 (285)
T ss_dssp HHHHTT
T ss_pred HHHHcC
Confidence 997644
|
| >d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: p18ink4C(ink6) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.89 E-value=5.5e-23 Score=169.51 Aligned_cols=122 Identities=13% Similarity=0.123 Sum_probs=111.8
Q ss_pred CCCHHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCc
Q 039985 101 NISTISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNW 180 (357)
Q Consensus 101 g~t~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~ 180 (357)
|.||||+|+ .|+.+++++|++.+++ .+..+..|.+ ||+.++..++.++++.|++.+.+++ ..+.
T Consensus 34 g~TpL~~A~-~~~~ei~~~Ll~~~a~-------~~~~~~~~~~-~l~~~~~~~~~~~~~~l~~~~~~~~-------~~~~ 97 (156)
T d1ihba_ 34 GRTALQVMK-LGNPEIARRLLLRGAN-------PDLKDRTGFA-VIHDAARAGFLDTLQTLLEFQADVN-------IEDN 97 (156)
T ss_dssp SCCHHHHCC-SSCHHHHHHHHHTTCC-------TTCCCTTSCC-HHHHHHHHTCHHHHHHHHHTTCCTT-------CCCT
T ss_pred ccccccccc-cccccccccccccccc-------cccccccCcc-ccccccccccccccccccccccccc-------cccc
Confidence 779999886 7999999999999998 7788999999 9999999999999999999998876 5556
Q ss_pred CcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhh
Q 039985 181 AIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKE 240 (357)
Q Consensus 181 ~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~ 240 (357)
.|.+|||+|+..|+.+++++|+++++... +.+|..|+||||+|+..|+.+++++|+++
T Consensus 98 ~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~--~~~d~~g~TpL~~A~~~~~~~iv~~Ll~~ 155 (156)
T d1ihba_ 98 EGNLPLHLAAKEGHLRVVEFLVKHTASNV--GHRNHKGDTACDLARLYGRNEVVSLMQAN 155 (156)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHHSCCCT--TCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred ccccccccccccccccccccccccccccc--cccCCCCCCHHHHHHHcCCHHHHHHHHhc
Confidence 69999999999999999999999998544 49999999999999999999999999873
|
| >d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Pyk2-associated protein beta species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.89 E-value=6.9e-23 Score=169.82 Aligned_cols=125 Identities=13% Similarity=0.138 Sum_probs=108.6
Q ss_pred HHHHHHhcCCHHHHHHHHhcCcchhHHHhhhhhcCCCCCcHHHHHHHhc---CcHHHHHHHHHcCCCCCCCCCCccCCCc
Q 039985 104 TISLGLGKGNMLKAKKLVDFSAGELDELLLKKDCTNKGNMIKAKKFVDF---SAAELVELFVKKDCTIKGVPNHKKDKNW 180 (357)
Q Consensus 104 ~Lh~A~~~g~~~~vk~Ll~~~~~~~~~~l~~~~~~~~g~t~pLh~A~~~---g~~~iv~~Ll~~g~~~~~~~~~~~~~~~ 180 (357)
.|+.|++.+++..+..++..+.+ +...+.....+..|.| |||+|+.. |+.++|++|+++|++++ .+|.
T Consensus 9 ~L~~Av~~~dl~~l~~~~~~g~d-~~~~~~~~~~~~~g~t-~Lh~A~~~~~~~~~~iv~~Ll~~gadin-------~~d~ 79 (154)
T d1dcqa1 9 SLCEAVKTRDIFGLLQAYADGVD-LTEKIPLANGHEPDET-ALHLAVRSVDRTSLHIVDFLVQNSGNLD-------KQTG 79 (154)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCC-TTSBCCCSSCSSTTCB-HHHHHHHHCCTTTHHHHHHHHHHCSCTT-------CCCT
T ss_pred HHHHHHHhCCHHHHHHHHHcCCC-cCCCCCcccCCCCCCc-hHHHHHHhcCCCCHHHHHHHHHcCCChh-------hhhh
Confidence 56788999999999999988775 1111112335778999 99999975 67899999999999987 6667
Q ss_pred CcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHHhh
Q 039985 181 AIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELITKE 240 (357)
Q Consensus 181 ~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll~~ 240 (357)
.|+||||+||..|+.+++++|+++|+++. .+|..|+||||+|+++|+.+++++|++.
T Consensus 80 ~g~TpLh~A~~~~~~~~v~~Ll~~gad~~---~~d~~g~tpL~~A~~~~~~~i~~~L~~~ 136 (154)
T d1dcqa1 80 KGSTALHYCCLTDNAECLKLLLRGKASIE---IANESGETPLDIAKRLKHEHCEELLTQA 136 (154)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCCTT---CCCTTSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred hhccccccccccccccccccccccCcccc---ccCCCCCCHHHHHHHcCCHHHHHHHHHh
Confidence 79999999999999999999999999998 9999999999999999999999999885
|
| >d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Neurogenic locus notch receptor domain species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.89 E-value=7.1e-23 Score=176.63 Aligned_cols=164 Identities=13% Similarity=0.114 Sum_probs=129.7
Q ss_pred HHHHHHHHhcCcchhHHHhhhhh-cCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCcCcchHHHHHH--
Q 039985 114 MLKAKKLVDFSAGELDELLLKKD-CTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNWAIRLTLLFAA-- 190 (357)
Q Consensus 114 ~~~vk~Ll~~~~~~~~~~l~~~~-~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~G~TpLh~Aa-- 190 (357)
.++|+.|++.|++ .+. .|.+|.| |||+||..|+.+++++|++.|++++ .++..+.++++.++
T Consensus 2 ~~~v~~Ll~~g~d-------in~~~d~~G~t-~L~~A~~~g~~e~v~~Ll~~g~~~n-------~~~~~~~~~~~~~~~~ 66 (209)
T d1ot8a_ 2 AQVISDLLAQGAE-------LNATMDKTGET-SLHLAARFARADAAKRLLDAGADAN-------SQDNTGRTPLHAAVAA 66 (209)
T ss_dssp HHHHHHHHHHHHH-------HHHHHHHHCCC-HHHHHHHTTCHHHHHHHHHTTCCTT-------CCCTTSCCHHHHHHHT
T ss_pred HHHHHHHHHCCCC-------cCcCcCCCCCC-HHHHHHHcCCHHHHHHHHhhccccc-------cccccccccccccccc
Confidence 4899999999998 443 5899999 9999999999999999999999876 23333445555544
Q ss_pred --------------------------------HCCCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHH
Q 039985 191 --------------------------------SNGITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELIT 238 (357)
Q Consensus 191 --------------------------------~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll 238 (357)
......+.+.|+..++++. .+|..|+||||+|+.+++.++++.|+
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~---~~~~~~~t~l~~~~~~~~~~~~~~l~ 143 (209)
T d1ot8a_ 67 DAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADIN---AADNSGKTALHWAAAVNNTEAVNILL 143 (209)
T ss_dssp TCHHHHHHHHTCTTCCTTCCCTTCCCHHHHHHHTTCTTHHHHHHHTTCCTT---CBCTTSCBHHHHHHHTTCHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccccccccchhhhhhhhhhccccc---ccCCCCCCcchhhcccCcceeeeeec
Confidence 4455566666777777766 78888999999999999999998887
Q ss_pred hhhccCCccccccccCCCCcHHHHHHHcCCCCCCCCCCChhHHHHHhhhHHHHHHhcc-CcccccccccCCCCHHHHHhh
Q 039985 239 KEMQLSVPKWASRIDKKGYTLLHHVADMKHYKEGTRPGPVLQFQEELQLFEHVKEIMP-RHYAMHRDEKNKMTASDLFNL 317 (357)
Q Consensus 239 ~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~~~~~~~~t~L~la~~l~~~~~v~~ll~-~~~~~~~n~~g~~Tp~dl~~~ 317 (357)
. .+.+++.+|.+|+||||+|+..|+ .+.++.|+. +.+.+.+|.+|+ ||+++|.+
T Consensus 144 ~-----~~~~~~~~d~~g~TpL~~A~~~g~-------------------~~~v~~Ll~~gad~n~~d~~g~-Tpl~~A~~ 198 (209)
T d1ot8a_ 144 M-----HHANRDAQDDKDETPLFLAAREGS-------------------YEASKALLDNFANREITDHMDR-LPRDVASE 198 (209)
T ss_dssp H-----TTCCTTCCCTTCCCHHHHHHHTTC-------------------HHHHHHHHHTTCCTTCCCTTSC-CHHHHHHH
T ss_pred c-----ccccccccccccccccchhccccH-------------------HHHHHHHHHCCCCCCCcCCCCC-CHHHHHHH
Confidence 7 566788888899999999998886 345666664 357889999999 99999876
Q ss_pred hhH
Q 039985 318 THE 320 (357)
Q Consensus 318 ~~~ 320 (357)
...
T Consensus 199 ~~~ 201 (209)
T d1ot8a_ 199 RLH 201 (209)
T ss_dssp TTC
T ss_pred cCC
Confidence 543
|
| >d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: 53BP2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.88 E-value=8.2e-23 Score=164.44 Aligned_cols=110 Identities=14% Similarity=-0.033 Sum_probs=99.5
Q ss_pred HHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCcCcchHHHHHHHCCCHHHHHHHHhhCCCcccccccCCCCChHHHH
Q 039985 145 KAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNWAIRLTLLFAASNGITEILKEIIHQHPQAILLDNLNEKEQNILHV 224 (357)
Q Consensus 145 pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~G~TpLh~Aa~~G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~ 224 (357)
+|+.|+..|+.++|++|+++|++++ .+|..|+||||+||..|+.+++++|++.|++++ .+|.+|+||||+
T Consensus 4 lL~~A~~~G~~~~v~~Ll~~g~d~n-------~~d~~g~t~Lh~A~~~~~~~~~~~ll~~g~~~~---~~d~~g~tpLh~ 73 (130)
T d1ycsb1 4 LLLDSSLEGEFDLVQRIIYEVDDPS-------LPNDEGITALHNAVCAGHTEIVKFLVQFGVNVN---AADSDGWTPLHC 73 (130)
T ss_dssp HHHHHHHHTCHHHHHHHTSTTSSCC-------CCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTT---CCCTTCCCHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCcc-------ccccccccccccccccccccccccccccccccc---cccccCcccccc
Confidence 8999999999999999999999987 666679999999999999999999999999998 999999999999
Q ss_pred HHHcCCHHHHHHHHhhhccCCccccccccC-CCCcHHHHHH--HcCCC
Q 039985 225 AVKRRQYKVFELITKEMQLSVPKWASRIDK-KGYTLLHHVA--DMKHY 269 (357)
Q Consensus 225 A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~-~G~TpLh~Aa--~~g~~ 269 (357)
|+.+|+.++|++|++ .+++++.++. +|+||++++. ..|+.
T Consensus 74 A~~~g~~~~v~~Ll~-----~ga~v~~~~~~~~~~~~~~~~a~~~g~~ 116 (130)
T d1ycsb1 74 AASCNNVQVCKFLVE-----SGAAVFAMTYSDMQTAADKCEEMEEGYT 116 (130)
T ss_dssp HHHTTCHHHHHHHHH-----TTCCTTCCCSSSCCCHHHHCCSSSTTCC
T ss_pred cchhhHHHHHHHHHH-----cCCCcccccCCCCCCHHHHHHHHHcChH
Confidence 999999999999998 6788888774 6899987764 55553
|
| >d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Swi6 ankyrin-repeat fragment species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.88 E-value=4.3e-23 Score=189.43 Aligned_cols=146 Identities=16% Similarity=0.121 Sum_probs=111.1
Q ss_pred cCCCCCcHHHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCcCcchHHHHHHHCCCH-------HHHHHHHhhCCCcc
Q 039985 137 CTNKGNMIKAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNWAIRLTLLFAASNGIT-------EILKEIIHQHPQAI 209 (357)
Q Consensus 137 ~~~~g~t~pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~G~TpLh~Aa~~G~~-------~iv~~Ll~~~~~~~ 209 (357)
.|.+|+| |||+||..|+.++|++|+++|++++ .+|..|+||||.||..|+. +++++|.. +..
T Consensus 103 ~D~~G~T-~LH~Aa~~g~~~~v~~Ll~~gad~~-------~~d~~G~TpL~~A~~~~~~~~~~~~~~ll~~l~~---~~~ 171 (301)
T d1sw6a_ 103 VDEHGNT-PLHWLTSIANLELVKHLVKHGSNRL-------YGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYP---CLI 171 (301)
T ss_dssp CSTTCCC-HHHHHHHTTCHHHHHHHHHTTCCTT-------BCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGG---GGG
T ss_pred cCCCCCC-HHHHHHHcCCHHHHHHHHHCCCCCC-------cCCcccccHHHHhhhcccchhhhhHHHHHHHHhh---hhh
Confidence 3889999 9999999999999999999999988 6677799999999987763 44444432 344
Q ss_pred cccccCCCCChHHHHHHHcCC----HHHHH--------HHHhhhccC--------------------------------C
Q 039985 210 LLDNLNEKEQNILHVAVKRRQ----YKVFE--------LITKEMQLS--------------------------------V 245 (357)
Q Consensus 210 ~~~~~d~~G~TpLh~A~~~g~----~~iv~--------~Ll~~~~~~--------------------------------~ 245 (357)
.+|..|+||||+++..+. ..+++ .++...... .
T Consensus 172 ---~~d~~g~t~lh~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (301)
T d1sw6a_ 172 ---LEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWII 248 (301)
T ss_dssp ---EECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHH
T ss_pred ---hcccccCCHHHHHHHHhCccccHHHHHHHHHHHHHHHHhcCCcchhcccccccchhHHHHhcchHHHHHHHhhHHHH
Confidence 789999999999987654 23333 333321100 0
Q ss_pred ccccccccCCCCcHHHHHHHcCCCCCCCCCCChhHHHHHhhhHHHHHHhcc-CcccccccccCCCCHHHHHh
Q 039985 246 PKWASRIDKKGYTLLHHVADMKHYKEGTRPGPVLQFQEELQLFEHVKEIMP-RHYAMHRDEKNKMTASDLFN 316 (357)
Q Consensus 246 ~~~~~~~d~~G~TpLh~Aa~~g~~~~~~~~~t~L~la~~l~~~~~v~~ll~-~~~~~~~n~~g~~Tp~dl~~ 316 (357)
...+|.+|.+|+||||+||+.|+. +.|+.|+. +.+.+++|++|+ ||+|+|.
T Consensus 249 ~~~in~~D~~G~TpLh~A~~~g~~-------------------~iv~~Ll~~GAd~~~~n~~G~-Tpl~~A~ 300 (301)
T d1sw6a_ 249 ANMLNAQDSNGDTCLNIAARLGNI-------------------SIVDALLDYGADPFIANKSGL-RPVDFGA 300 (301)
T ss_dssp HHTTTCCCTTSCCHHHHHHHHCCH-------------------HHHHHHHHTTCCTTCCCTTSC-CGGGGTC
T ss_pred hcCccCCCCCCCCHHHHHHHcCCH-------------------HHHHHHHHCCCCCCCCCCCCC-CHHHHcC
Confidence 113789999999999999999973 45666664 458899999999 9999873
|
| >d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: RNase L, 2-5a-dependent ribonuclease species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.86 E-value=5.7e-21 Score=171.90 Aligned_cols=232 Identities=12% Similarity=0.100 Sum_probs=159.1
Q ss_pred hhccccHHHHHHHHHhhhhc---ccCCCCCCCcCcCCCCCCCCC------CCCCCCCCCCCCCCCCCC---CCC----CC
Q 039985 23 KQMHKNANKLLKKLVKEETL---CLGDGEQNPEISLLSPESSST------SLPNPEISSSNPESSTSS---LPN----PE 86 (357)
Q Consensus 23 ~~~~~~~~~iv~~Ll~~~~~---~~d~~g~~p~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~---~~~----~~ 86 (357)
++...+..++|++||++|++ ..+..|+||++.+........ ..............+... ... ..
T Consensus 11 ~Ai~~~~~e~vk~Ll~~G~din~~~~~~g~tpL~~A~~~~~~eiv~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (285)
T d1wdya_ 11 KAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKL 90 (285)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHH
T ss_pred HHHHcCCHHHHHHHHHCCCCcCccCCCCCCCHHHHHHHcCCHHHhhhhccccccccccccccchhhHHHhhcCCccccch
Confidence 44455777999999999998 334579999875433222000 000000000000000000 000 00
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHhcCCHHHHHHHHhcCcch---hHHHhhhhhcCCCCCcHHHHHHHhcCcHHHHHHHHH
Q 039985 87 IFSPDPESSTTSPANISTISLGLGKGNMLKAKKLVDFSAGE---LDELLLKKDCTNKGNMIKAKKFVDFSAAELVELFVK 163 (357)
Q Consensus 87 ~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~vk~Ll~~~~~~---~~~~l~~~~~~~~g~t~pLh~A~~~g~~~iv~~Ll~ 163 (357)
..............|.++|+.|+..|+...++.++...... ..........+..|.| |||+|+..|+.+++++|++
T Consensus 91 ~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t-~L~~A~~~~~~~~~~~Ll~ 169 (285)
T d1wdya_ 91 FLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGAT-ALMDAAEKGHVEVLKILLD 169 (285)
T ss_dssp HHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCC-HHHHHHHHTCHHHHHHHHH
T ss_pred hhhhcccccccccCCCchhHHHHHhcchhhhhhhhhhcccccccccchhhhhhhcccCch-HHHHHHHcCCHHHHHHHHh
Confidence 00001112223445889999999999999999998865540 0000113456788999 9999999999999999997
Q ss_pred c-CCCCCCCCCCccCCCcCcchHHHHHHHC----CCHHHHHHHHhhCCCcccccccCCCCChHHHHHHHcCCHHHHHHHH
Q 039985 164 K-DCTIKGVPNHKKDKNWAIRLTLLFAASN----GITEILKEIIHQHPQAILLDNLNEKEQNILHVAVKRRQYKVFELIT 238 (357)
Q Consensus 164 ~-g~~~~~~~~~~~~~~~~G~TpLh~Aa~~----G~~~iv~~Ll~~~~~~~~~~~~d~~G~TpLh~A~~~g~~~iv~~Ll 238 (357)
+ |++++ ..+..|.++++.+... +..+++++|+++|++++ .+|..|+||||+|+..|+.++|++||
T Consensus 170 ~~~~~i~-------~~~~~~~~~~~~~~~~~~~~~~~~i~~~Li~~ga~~n---~~~~~g~t~L~~a~~~~~~~~v~~lL 239 (285)
T d1wdya_ 170 EMGADVN-------ACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVN---VRGERGKTPLILAVEKKHLGLVQRLL 239 (285)
T ss_dssp TSCCCTT-------CCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSS---CCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred ccCCCcc-------cccCCCCcccccccccccchHHHHHHHHHHHCCCCCC---ccCCCCCCccchhhhcCcHHHHHHHH
Confidence 5 67776 4555688887765543 34579999999999998 89999999999999999999999999
Q ss_pred hhhccCCccccccccCCCCcHHHHHHHcCCC
Q 039985 239 KEMQLSVPKWASRIDKKGYTLLHHVADMKHY 269 (357)
Q Consensus 239 ~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~ 269 (357)
.. .+.+++.+|.+|+||||+|++.|+.
T Consensus 240 ~~----~g~din~~d~~G~TpL~~A~~~~~~ 266 (285)
T d1wdya_ 240 EQ----EHIEINDTDSDGKTALLLAVELKLK 266 (285)
T ss_dssp HS----SSCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred Hc----CCCCCcCCCCCCCCHHHHHHHcCCH
Confidence 85 5789999999999999999999973
|
| >d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: beta-hairpin-alpha-hairpin repeat superfamily: Ankyrin repeat family: Ankyrin repeat domain: Pyk2-associated protein beta species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.85 E-value=4.5e-21 Score=158.72 Aligned_cols=116 Identities=11% Similarity=0.012 Sum_probs=102.2
Q ss_pred HHHHHHhcCcHHHHHHHHHcCCCCCCCCCCccCCCcCcchHHHHHHH---CCCHHHHHHHHhhCCCcccccccCCCCChH
Q 039985 145 KAKKFVDFSAAELVELFVKKDCTIKGVPNHKKDKNWAIRLTLLFAAS---NGITEILKEIIHQHPQAILLDNLNEKEQNI 221 (357)
Q Consensus 145 pLh~A~~~g~~~iv~~Ll~~g~~~~~~~~~~~~~~~~G~TpLh~Aa~---~G~~~iv~~Ll~~~~~~~~~~~~d~~G~Tp 221 (357)
.|..|+..++...+..++..|.++....... ..+..|+||||+|++ .|+.++|++|+++|++++ .+|.+|+||
T Consensus 9 ~L~~Av~~~dl~~l~~~~~~g~d~~~~~~~~-~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadin---~~d~~g~Tp 84 (154)
T d1dcqa1 9 SLCEAVKTRDIFGLLQAYADGVDLTEKIPLA-NGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLD---KQTGKGSTA 84 (154)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTSBCCCS-SCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTT---CCCTTCCCH
T ss_pred HHHHHHHhCCHHHHHHHHHcCCCcCCCCCcc-cCCCCCCchHHHHHHhcCCCCHHHHHHHHHcCCChh---hhhhhhccc
Confidence 5678899999999999999998876332222 445669999999997 478999999999999998 999999999
Q ss_pred HHHHHHcCCHHHHHHHHhhhccCCccccccccCCCCcHHHHHHHcCCC
Q 039985 222 LHVAVKRRQYKVFELITKEMQLSVPKWASRIDKKGYTLLHHVADMKHY 269 (357)
Q Consensus 222 Lh~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~d~~G~TpLh~Aa~~g~~ 269 (357)
||+||..|+.+++++|++ .+++++.+|.+|.||||+|++.|+.
T Consensus 85 Lh~A~~~~~~~~v~~Ll~-----~gad~~~~d~~g~tpL~~A~~~~~~ 127 (154)
T d1dcqa1 85 LHYCCLTDNAECLKLLLR-----GKASIEIANESGETPLDIAKRLKHE 127 (154)
T ss_dssp HHHHHHTTCHHHHHHHHH-----TTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred cccccccccccccccccc-----cCccccccCCCCCCHHHHHHHcCCH
Confidence 999999999999999998 6889999999999999999999973
|