Citrus Sinensis ID: 040085

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310------
MGTDEVQDEIPFLDFSGEVLDDFTDERWREMCGQVRDALETHGFFVMYHDKIPKSLREDMFKAMNALFDLPEETKSKYASSKPYRSYMGESPAVPLHQSFGIDNEPGIDVDTTAQAFTNLMWPQGNPSFCETLKSVTSKMLELNYTILKMVFESFGTGKLYVPHIQGSITLFRLMKYKVPPNNESAVGLIPHTDKNVLSILCENNVQGLEILNKDGVYVPVGVPDNASVVIVGDTLKAWSNGRLKAPKHRVMMSGNKERYSFGSFSMPKEGVATEVPNELVDDDHPLVYRPFKFSEFMAYFVNNISDDALEIYAGI
cccccccccccEEEccccccccccHHHHHHHHHHHHHHHHHccEEEEEcccccHHHHHHHHHHHHHHccccHHHHHHHccccccccEEEEcccccccccccccccccccccccHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccEEEEEcccccccccccccccccccccEEEEEccccccEEEEEccccEEEcccccccEEEEHHHHHHHHHcccccccccEEEEcccccEEEEEEEEccccccEEEccccccccccccccccccHHHHHHHHHHccccccccccccc
cccccccccccEEEccccccccccHHHHHHHHHHHHHHHHHcccEEEEcccccHHHHHHHHHHHHHHHcccHHHHHHHHcccccccEEEEEccccccEEEEEEEEcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHcccccccEEEEEcccccccccccccccccccccEEEEEEccccccEEEEEEcccEEEccccccEEEEEEcccEEEEccccEEEEEEEEEEEccccEEEEEEEcccccccEEcccHHHcccccccccccccHHHHHHHHHHcccccccHHHHcc
mgtdevqdeipfldfsgevlddfTDERWREMCGQVRDALETHgffvmyhdkipkSLREDMFKAMNALfdlpeetkskyasskpyrsymgespavplhqsfgidnepgidvdTTAQAFTnlmwpqgnpsfcETLKSVTSKMLELNYTILKMVFEsfgtgklyvphiqgsiTLFRLMkykvppnnesavgliphtdkNVLSILCENNvqgleilnkdgvyvpvgvpdnasvVIVGDTLKawsngrlkapkhrvmmsgnkerysfgsfsmpkegvatevpnelvdddhplvyrpfkfSEFMAYFVNNISDDALEIYAGI
mgtdevqdeipfldfsgevLDDFTDERWREMCGQVRDALETHGFFVMYHDKIPKSLREDMFKAMNALfdlpeetkskYASSKPYRSYMGESPAVPLHQSFGIDNEPGIDVDTTAQAFTNLMWPQGNPSFCETLKSVTSKMLELNYTILKMVFESFGTGKLYVPHIQGSITLFRLMKYKVPPNNESAVGLIPHTDKNVLSILCENNVQGLEILNKDGVYVPVGVPDNASVVIVGDTLkawsngrlkapkhrvmmsgNKERYSFGSFSMPKEGVATEVPNELVDDDHPLVYRPFKFSEFMAYFVNNISDDALEIYAGI
MGTDEVQDEIPFLDFSGEVLDDFTDERWREMCGQVRDALETHGFFVMYHDKIPKSLREDMFKAMNALFDLPEETKSKYASSKPYRSYMGESPAVPLHQSFGIDNEPGIDVDTTAQAFTNLMWPQGNPSFCETLKSVTSKMLELNYTILKMVFESFGTGKLYVPHIQGSITLFRLMKYKVPPNNESAVGLIPHTDKNVLSILCENNVQGLEILNKDGVYVPVGVPDNASVVIVGDTLKAWSNGRLKAPKHRVMMSGNKERYSFGSFSMPKEGVATEVPNELVDDDHPLVYRPFKFSEFMAYFVNNISDDALEIYAGI
*********IPFLDFSGEVLDDFTDERWREMCGQVRDALETHGFFVMYHDKIPKSLREDMFKAMNALF*******************************FGIDNEPGIDVDTTAQAFTNLMWPQGNPSFCETLKSVTSKMLELNYTILKMVFESFGTGKLYVPHIQGSITLFRLMKYKVPPNNESAVGLIPHTDKNVLSILCENNVQGLEILNKDGVYVPVGVPDNASVVIVGDTLKAWSNGRL*********************************NELVDDDHPLVYRPFKFSEFMAYFVNNISDDALEIY***
*****VQDEIPFLDFSGEVL*****ER**EMCGQVRDALETHGFFVMYHDKIPKSLREDMFKAMNALFDLPEETKSKY*******SYMGESPAVPLHQSFGIDNEPGIDVDTTAQAFTNLMWPQGNPSFCETLKSVTSKMLELNYTILKMVFESFGTGKLYVPHIQGSITLFRLMKYKVPPNNESAVGLIPHTDKNVLSILCENNVQGLEILNKDGVYVPVGVPDNASVVIVGDTLKAWSNGRLKAPKHRVMMSGNKERYSFGSFSMPKEGVATEVPNELVDDDHPLVYRPFKFSEFMAYFVNNISDDALEIYAGI
MGTDEVQDEIPFLDFSGEVLDDFTDERWREMCGQVRDALETHGFFVMYHDKIPKSLREDMFKAMNALFDLPEETKSKYASSKPYRSYMGESPAVPLHQSFGIDNEPGIDVDTTAQAFTNLMWPQGNPSFCETLKSVTSKMLELNYTILKMVFESFGTGKLYVPHIQGSITLFRLMKYKVPPNNESAVGLIPHTDKNVLSILCENNVQGLEILNKDGVYVPVGVPDNASVVIVGDTLKAWSNGRLKAPKHRVMMSGNKERYSFGSFSMPKEGVATEVPNELVDDDHPLVYRPFKFSEFMAYFVNNISDDALEIYAGI
****EVQDEIPFLDFSGEVLDDFTDERWREMCGQVRDALETHGFFVMYHDKIPKSLREDMFKAMNALFDLPEETKSKYASSKPYRSYMGESPAVPLHQSFGIDNEPGIDVDTTAQAFTNLMWPQGNPSFCETLKSVTSKMLELNYTILKMVFESFGTGKLYVPHIQGSITLFRLMKYKVPPNNESAVGLIPHTDKNVLSILCENNVQGLEILNKDGVYVPVGVPDNASVVIVGDTLKAWSNGRLKAPKHRVMMSGNKERYSFGSFSMPKEGVATEVPNELVDDDHPLVYRPFKFSEFMAYFVNNIS**********
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MGTDEVQDEIPFLDFSGEVLDDFTDERWREMCGQVRDALETHGFFVMYHDKIPKSLREDMFKAMNALFDLPEETKSKYASSKPYRSYMGESPAVPLHQSFGIDNEPGIDVDTTAQAFTNLMWPQGNPSFCETLKSVTSKMLELNYTILKMVFESFGTGKLYVPHIQGSITLFRLMKYKVPPNNESAVGLIPHTDKNVLSILCENNVQGLEILNKDGVYVPVGVPDNASVVIVGDTLKAWSNGRLKAPKHRVMMSGNKERYSFGSFSMPKEGVATEVPNELVDDDHPLVYRPFKFSEFMAYFVNNISDDALEIYAGI
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query316 2.2.26 [Sep-21-2011]
Q9C971355 Gibberellin 3-beta-dioxyg no no 0.939 0.836 0.259 2e-20
P51091357 Leucoanthocyanidin dioxyg N/A no 0.939 0.831 0.280 6e-19
Q39112380 Gibberellin 20 oxidase 3 no no 0.876 0.728 0.267 1e-18
O04706365 Gibberellin 20 oxidase 1- N/A no 0.939 0.813 0.257 1e-18
Q9SVS8349 Gibberellin 3-beta-dioxyg no no 0.835 0.756 0.265 2e-18
P93771372 Gibberellin 20 oxidase 1 no no 0.867 0.736 0.260 3e-18
O49561338 Gibberellin 2-beta-dioxyg no no 0.835 0.781 0.278 8e-18
O04705361 Gibberellin 20 oxidase 1- N/A no 0.939 0.822 0.253 9e-18
O04707365 Gibberellin 20 oxidase 1- N/A no 0.939 0.813 0.250 1e-17
Q9C899361 Feruloyl CoA ortho-hydrox no no 0.892 0.781 0.251 3e-17
>sp|Q9C971|G3OX4_ARATH Gibberellin 3-beta-dioxygenase 4 OS=Arabidopsis thaliana GN=At1g80330 PE=1 SV=1 Back     alignment and function desciption
 Score = 99.8 bits (247), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/320 (25%), Positives = 137/320 (42%), Gaps = 23/320 (7%)

Query: 4   DEVQDEIPFLDFSGEVLDDFTDERWREMCGQVRDALETHGFFVMYHDKIPKSLREDMFKA 63
           D V++ IP +D S             ++   + DA +T G F + +  I + L +D+   
Sbjct: 43  DAVEESIPVIDLSNP-----------DVTTLIGDASKTWGAFQIANHGISQKLLDDIESL 91

Query: 64  MNALFDLPEETKSKYASSKPYRSYMGESPAVPLHQSFGIDNEPGIDVDTTAQAFTNLMWP 123
              LFD+P E K + ASS    S  GE    P  +         I  D+    F N +WP
Sbjct: 92  SKTLFDMPSERKLEAASSDKGVSGYGEPRISPFFEKKMWSEGFTIADDSYRNHF-NTLWP 150

Query: 124 QGNPSFCETLKSVTSKMLELNYTILKMVFESFGTG--------KLYVPHIQGSITLFRLM 175
             +  +C  ++    +M +L   +L  +  S G          KL     +      RL 
Sbjct: 151 HDHTKYCGIIQEYVDEMEKLASRLLYCILGSLGVTVEDIEWAHKLEKSGSKVGRGAIRLN 210

Query: 176 KYKVPPNNESAVGLIPHTDKNVLSILCENNVQGLEILNKDGVYVPVGVPDNASVVIVGDT 235
            Y V P  E A+GL  HTD  +L+IL ++N  GL++  ++  +V V       VV +GD 
Sbjct: 211 HYPVCPEPERAMGLAAHTDSTILTILHQSNTGGLQVFREESGWVTVEPAPGVLVVNIGDL 270

Query: 236 LKAWSNGRLKAPKHRVMMSGNKERYSFGS-FSMPKEGVATEVPNELVDDDHPLVYRPFKF 294
               SNG++ +  HR  ++  + R S    +  P   V     ++L     P +YR   +
Sbjct: 271 FHILSNGKIPSVVHRAKVNHTRSRISIAYLWGGPAGDVQIAPISKLTGPAEPSLYRSITW 330

Query: 295 SEFMA--YFVNNISDDALEI 312
            E++   Y V + + DA+ +
Sbjct: 331 KEYLQIKYEVFDKAMDAIRV 350
Converts the inactive gibbberellin precursors GA9 and GA20 in the bioactives gibberellins GA4 and GA1.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: 4EC: .EC: 1EC: 1EC: .EC: 1EC: 5
>sp|P51091|LDOX_MALDO Leucoanthocyanidin dioxygenase OS=Malus domestica GN=ANS PE=2 SV=1 Back     alignment and function description
>sp|Q39112|GAOX3_ARATH Gibberellin 20 oxidase 3 OS=Arabidopsis thaliana GN=20ox3 PE=2 SV=1 Back     alignment and function description
>sp|O04706|GAO1B_WHEAT Gibberellin 20 oxidase 1-B OS=Triticum aestivum GN=GA20ox1B PE=2 SV=1 Back     alignment and function description
>sp|Q9SVS8|G3OX3_ARATH Gibberellin 3-beta-dioxygenase 3 OS=Arabidopsis thaliana GN=At4g21690 PE=2 SV=1 Back     alignment and function description
>sp|P93771|GAOX1_ORYSJ Gibberellin 20 oxidase 1 OS=Oryza sativa subsp. japonica GN=20ox1 PE=2 SV=2 Back     alignment and function description
>sp|O49561|G2OX8_ARATH Gibberellin 2-beta-dioxygenase 8 OS=Arabidopsis thaliana GN=GA2OX7 PE=1 SV=2 Back     alignment and function description
>sp|O04705|GAO1D_WHEAT Gibberellin 20 oxidase 1-D OS=Triticum aestivum GN=GA20ox1D PE=1 SV=1 Back     alignment and function description
>sp|O04707|GAO1A_WHEAT Gibberellin 20 oxidase 1-A OS=Triticum aestivum GN=GA20ox1A PE=2 SV=1 Back     alignment and function description
>sp|Q9C899|F6H2_ARATH Feruloyl CoA ortho-hydroxylase 2 OS=Arabidopsis thaliana GN=F6'H2 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query316
224143055313 2-oxoglutarate-dependent dioxygenase [Po 0.965 0.974 0.588 1e-110
224092400314 2-oxoglutarate-dependent dioxygenase [Po 0.965 0.971 0.588 1e-110
225430182316 PREDICTED: gibberellin 3-beta-dioxygenas 0.990 0.990 0.539 1e-99
255549082316 Gibberellin 2-beta-dioxygenase, putative 0.962 0.962 0.566 2e-98
356507766316 PREDICTED: gibberellin 3-beta-dioxygenas 0.955 0.955 0.544 4e-90
356515486313 PREDICTED: LOW QUALITY PROTEIN: gibberel 0.946 0.955 0.538 7e-89
296081985252 unnamed protein product [Vitis vinifera] 0.791 0.992 0.569 4e-85
356509944315 PREDICTED: gibberellin 3-beta-dioxygenas 0.952 0.955 0.5 6e-83
388508802319 unknown [Lotus japonicus] 0.984 0.974 0.484 3e-80
357436837298 2-oxoglutarate-dependent dioxygenase [Me 0.876 0.929 0.519 2e-75
>gi|224143055|ref|XP_002324836.1| 2-oxoglutarate-dependent dioxygenase [Populus trichocarpa] gi|222866270|gb|EEF03401.1| 2-oxoglutarate-dependent dioxygenase [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  404 bits (1037), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 183/311 (58%), Positives = 242/311 (77%), Gaps = 6/311 (1%)

Query: 9   EIPFLDFSGEVLD--DFTDERWREMCGQVRDALETHGFFVMYHDKIPKSLREDMFKAMNA 66
           EIPFLD S E L   +   E+W+E+C QVR+A ETHG F + +DKIP SLRE+MF A+ A
Sbjct: 6   EIPFLDISEEALAGIEVKSEKWKELCNQVREACETHGIFFLVYDKIPTSLREEMFVALKA 65

Query: 67  LFDLPEETKSKYASSKPYRSYMGESPAVPLHQSFGIDNEPGIDVDTTAQAFTNLMWPQGN 126
           LFDLPEETK+K+ + KPYRSY+G  P +P H+SFG+D+ P +D    +QAFTNLMWP+GN
Sbjct: 66  LFDLPEETKNKHVNPKPYRSYLGNCPVIPFHESFGVDDAPTLD---ASQAFTNLMWPEGN 122

Query: 127 PSFCETLKSVTSKMLELNYTILKMVFESFGTGKLYVPHIQGSITLFRLMKYKVPPN-NES 185
           PSFCET+  ++SKM ELN+ ++KM++ESF   KLY   ++ + ++FR+MKYKVPP+  +S
Sbjct: 123 PSFCETIHGMSSKMQELNFLVMKMIYESFDIEKLYDSFVEETTSIFRIMKYKVPPSATDS 182

Query: 186 AVGLIPHTDKNVLSILCENNVQGLEILNKDGVYVPVGVPDNASVVIVGDTLKAWSNGRLK 245
           ++GL+ HTDKN ++ILC+N VQGLEI  K+G +  V VP+NA   +VGD LKAWSNGRL 
Sbjct: 183 SIGLVAHTDKNAITILCQNEVQGLEIQTKNGYWAQVMVPENAFTAVVGDALKAWSNGRLH 242

Query: 246 APKHRVMMSGNKERYSFGSFSMPKEGVATEVPNELVDDDHPLVYRPFKFSEFMAYFVNNI 305
           A +HRV++SG K+RYS G FSMPKE    EVP+ELVD +HPL YRPF +S++++YFV+ +
Sbjct: 243 AARHRVVISGEKDRYSCGLFSMPKEEAVVEVPDELVDKEHPLQYRPFNYSDYISYFVSKL 302

Query: 306 SDDALEIYAGI 316
           SDDALEIYAGI
Sbjct: 303 SDDALEIYAGI 313

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224092400|ref|XP_002309592.1| 2-oxoglutarate-dependent dioxygenase [Populus trichocarpa] gi|222855568|gb|EEE93115.1| 2-oxoglutarate-dependent dioxygenase [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225430182|ref|XP_002284931.1| PREDICTED: gibberellin 3-beta-dioxygenase 4-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|255549082|ref|XP_002515597.1| Gibberellin 2-beta-dioxygenase, putative [Ricinus communis] gi|223545541|gb|EEF47046.1| Gibberellin 2-beta-dioxygenase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356507766|ref|XP_003522635.1| PREDICTED: gibberellin 3-beta-dioxygenase 3-like [Glycine max] Back     alignment and taxonomy information
>gi|356515486|ref|XP_003526431.1| PREDICTED: LOW QUALITY PROTEIN: gibberellin 20 oxidase 1-like [Glycine max] Back     alignment and taxonomy information
>gi|296081985|emb|CBI20990.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356509944|ref|XP_003523702.1| PREDICTED: gibberellin 3-beta-dioxygenase 3-like [Glycine max] Back     alignment and taxonomy information
>gi|388508802|gb|AFK42467.1| unknown [Lotus japonicus] Back     alignment and taxonomy information
>gi|357436837|ref|XP_003588694.1| 2-oxoglutarate-dependent dioxygenase [Medicago truncatula] gi|355477742|gb|AES58945.1| 2-oxoglutarate-dependent dioxygenase [Medicago truncatula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query316
TAIR|locus:2011506317 AT1G52820 [Arabidopsis thalian 0.958 0.955 0.425 4.7e-64
TAIR|locus:2011581314 AT1G52800 [Arabidopsis thalian 0.958 0.964 0.376 9.3e-59
TAIR|locus:2011576310 AT1G52790 [Arabidopsis thalian 0.952 0.970 0.371 4.3e-54
TAIR|locus:2139389322 AOP1 [Arabidopsis thaliana (ta 0.952 0.934 0.376 1e-52
TAIR|locus:2010474322 AT1G28030 [Arabidopsis thalian 0.917 0.900 0.380 4.7e-48
TAIR|locus:2034255320 AT1G80320 [Arabidopsis thalian 0.952 0.940 0.354 1.1e-46
TAIR|locus:2196618320 AT1G15540 [Arabidopsis thalian 0.930 0.918 0.369 4.4e-45
TAIR|locus:2011586289 AT1G52810 [Arabidopsis thalian 0.493 0.539 0.360 4.6e-40
TAIR|locus:2085879349 AT3G19010 [Arabidopsis thalian 0.946 0.856 0.289 7.1e-29
TAIR|locus:2089428364 LBO1 "LATERAL BRANCHING OXIDOR 0.943 0.818 0.294 3.5e-27
TAIR|locus:2011506 AT1G52820 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 653 (234.9 bits), Expect = 4.7e-64, P = 4.7e-64
 Identities = 132/310 (42%), Positives = 192/310 (61%)

Query:    10 IPFLDFSGEVLDDFTDERWREMCGQVRDALETHGFFVMYHDKIPKSLREDMFKAMNALFD 69
             +P +DFS + L     E W      V+ AL+ +G+F    D+IP  LR+ +F A+  LFD
Sbjct:    12 LPVIDFSNKNLKPGEPE-WDLTRADVQKALQDYGYFEASFDRIPFELRKSVFGALEELFD 70

Query:    70 LPEETKSKYASSKPYRSYMGESPAVPLHQSFGIDNEPGIDVDTTAQAFTNLMWPQGNPSF 129
             LP +TK +  S KP+  Y+G+ P VPL++S GID+    D+     AFT  +WPQGN SF
Sbjct:    71 LPLQTKLRNVSKKPFHGYVGQYPMVPLYESMGIDDS---DIAEKVDAFTEKLWPQGNISF 127

Query:   130 CETLKSVTSKMLELNYTILKMVFESFGTGKLYVPHIQGSITLFRLMKYKVPPNNESAVGL 189
               T++S + K+ EL+ TI +M+ ESFG  K    H+  +  L R+MKYK P   E+ VGL
Sbjct:   128 STTIQSFSKKLSELDITIRRMIMESFGLDKYIDEHLHSTNYLLRVMKYKGPDTEETKVGL 187

Query:   190 IPHTDKNVLSILCENNVQGLEILNKDGVYVPVGVPDNASVVIVGDTLKAWSNGRLKAPKH 249
               HTDKN+++IL +N+V+GLE+  KD  ++ V    ++  V++GD+L A  NGRL +P H
Sbjct:   188 NAHTDKNIVTILYQNHVEGLEVQTKDKNWIKVKPTQDSFTVMIGDSLYALLNGRLHSPYH 247

Query:   250 RVMMSGNKERYSFGSFSMPKEGVATEVPNELVDDDHPLVYRPFKFSEFMAYFVNNI---S 306
             RVMM+G + RYS G FS+PK G     P+ELVD++HP +++PF   EF+ ++       S
Sbjct:   248 RVMMTGTETRYSLGLFSIPKAGHIVSSPDELVDEEHPRLFKPFDHVEFLQFYYTEAGQRS 307

Query:   307 DDALEIYAGI 316
               AL+ Y GI
Sbjct:   308 QSALKTYCGI 317
GO:0005737 "cytoplasm" evidence=ISM
GO:0016491 "oxidoreductase activity" evidence=IEA
GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
TAIR|locus:2011581 AT1G52800 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2011576 AT1G52790 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2139389 AOP1 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2010474 AT1G28030 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2034255 AT1G80320 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2196618 AT1G15540 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2011586 AT1G52810 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2085879 AT3G19010 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2089428 LBO1 "LATERAL BRANCHING OXIDOREDUCTASE 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.14.11LOW CONFIDENCE prediction!
4th Layer1.14.11.7LOW CONFIDENCE prediction!
4th Layer1.14.11.4LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query316
PLN02365300 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxy 2e-40
PLN02639337 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxy 1e-33
PLN02254358 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase 9e-33
COG3491322 COG3491, PcbC, Isopenicillin N synthase and relate 3e-32
PLN02758361 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxy 1e-31
PLN02750345 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxy 3e-26
PLN02912348 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxy 6e-24
PLN03178360 PLN03178, PLN03178, leucoanthocyanidin dioxygenase 9e-24
PLN02276361 PLN02276, PLN02276, gibberellin 20-oxidase 1e-23
PLN02904357 PLN02904, PLN02904, oxidoreductase 2e-21
PLN02984341 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxy 2e-21
PLN02947374 PLN02947, PLN02947, oxidoreductase 2e-19
PLN02704335 PLN02704, PLN02704, flavonol synthase 3e-19
PLN00417348 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxy 5e-19
PLN02997325 PLN02997, PLN02997, flavonol synthase 2e-18
PLN02393362 PLN02393, PLN02393, leucoanthocyanidin dioxygenase 4e-18
PLN02156335 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase 4e-18
pfam0317196 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase supe 6e-18
pfam14226113 pfam14226, DIOX_N, non-haem dioxygenase in morphin 7e-16
PTZ00273320 PTZ00273, PTZ00273, oxidase reductase; Provisional 3e-15
PLN03001262 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxy 5e-15
PLN02403303 PLN02403, PLN02403, aminocyclopropanecarboxylate o 5e-14
PLN02216357 PLN02216, PLN02216, protein SRG1 1e-13
PLN02485329 PLN02485, PLN02485, oxidoreductase 2e-13
PLN03002332 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxy 1e-12
PLN02515358 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-di 2e-11
PLN02299321 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxyl 2e-08
>gnl|CDD|177993 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information 
 Score =  143 bits (361), Expect = 2e-40
 Identities = 92/292 (31%), Positives = 141/292 (48%), Gaps = 23/292 (7%)

Query: 10  IPFLDFSGEVLDDFTDERWREMCGQVRDALETHGFFVMYHDKIPKSLREDMFKAMNALFD 69
           IP +D     L++F  +  +     +R+A E  G F + +  +  SL  +M K + +LFD
Sbjct: 6   IPTID-----LEEFPGQIEK-----LREACERWGCFRVVNHGVSLSLMAEMKKVVRSLFD 55

Query: 70  LPEETKSKYASSKPYRSYMGESPAVPLHQSFGI-DNEPGIDVDTTAQAFTNLMWPQGNPS 128
           LP+E K +         YM  S   PL+++ G+ D      VDT    F + +    +P 
Sbjct: 56  LPDEVKRRNTDVILGSGYMAPSEVNPLYEALGLYDMASPQAVDT----FCSQL--DASPH 109

Query: 129 FCETLKSVTSKMLELNYTILKMVFESFGTGKLYVPH-IQGSITLFRLMKYKVPPNNESAV 187
             ET+K     + +L   + + + ES G   L      QG  + FR+ KY   P    + 
Sbjct: 110 QRETIKKYAKAIHDLAMDLARKLAESLG---LVEGDFFQGWPSQFRINKYNFTPETVGSS 166

Query: 188 GLIPHTDKNVLSILCEN-NVQGLEILNKD-GVYVPVGVPDNASVVIVGDTLKAWSNGRLK 245
           G+  HTD   L+IL ++ NV GLE+++   G +VPV       +V +GD   AWSNGRL 
Sbjct: 167 GVQIHTDSGFLTILQDDENVGGLEVMDPSSGEFVPVDPLPGTLLVNLGDVATAWSNGRLC 226

Query: 246 APKHRVMMSGNKERYSFGSFSMPKEGVATEVPNELVDDDHPLVYRPFKFSEF 297
             KHRV       R S  SF +  +    E P E VD +HP +Y+PF + ++
Sbjct: 227 NVKHRVQCKEATMRISIASFLLGPKDDDVEAPPEFVDAEHPRLYKPFTYEDY 278

Length = 300
>gnl|CDD|178245 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215142 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|226022 COG3491, PcbC, Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>gnl|CDD|215404 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178351 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178500 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215614 PLN03178, PLN03178, leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>gnl|CDD|215156 PLN02276, PLN02276, gibberellin 20-oxidase Back     alignment and domain information
>gnl|CDD|178492 PLN02904, PLN02904, oxidoreductase Back     alignment and domain information
>gnl|CDD|215534 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215510 PLN02947, PLN02947, oxidoreductase Back     alignment and domain information
>gnl|CDD|166345 PLN02704, PLN02704, flavonol synthase Back     alignment and domain information
>gnl|CDD|177810 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178576 PLN02997, PLN02997, flavonol synthase Back     alignment and domain information
>gnl|CDD|215220 PLN02393, PLN02393, leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>gnl|CDD|177816 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|217403 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase superfamily Back     alignment and domain information
>gnl|CDD|222608 pfam14226, DIOX_N, non-haem dioxygenase in morphine synthesis N-terminal Back     alignment and domain information
>gnl|CDD|140299 PTZ00273, PTZ00273, oxidase reductase; Provisional Back     alignment and domain information
>gnl|CDD|166642 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178025 PLN02403, PLN02403, aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>gnl|CDD|215129 PLN02216, PLN02216, protein SRG1 Back     alignment and domain information
>gnl|CDD|215267 PLN02485, PLN02485, oxidoreductase Back     alignment and domain information
>gnl|CDD|178579 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178130 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>gnl|CDD|215168 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 316
PLN02276361 gibberellin 20-oxidase 100.0
PTZ00273320 oxidase reductase; Provisional 100.0
PLN02216357 protein SRG1 100.0
PLN03002332 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02254358 gibberellin 3-beta-dioxygenase 100.0
PLN02758361 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02997325 flavonol synthase 100.0
PLN02485329 oxidoreductase 100.0
PLN02515358 naringenin,2-oxoglutarate 3-dioxygenase 100.0
PLN02750345 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02393362 leucoanthocyanidin dioxygenase like protein 100.0
PLN02365300 2-oxoglutarate-dependent dioxygenase 100.0
PLN02904357 oxidoreductase 100.0
PLN03178360 leucoanthocyanidin dioxygenase; Provisional 100.0
PLN02912348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
COG3491322 PcbC Isopenicillin N synthase and related dioxygen 100.0
PLN02639337 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02947374 oxidoreductase 100.0
PLN02156335 gibberellin 2-beta-dioxygenase 100.0
PLN02299321 1-aminocyclopropane-1-carboxylate oxidase 100.0
PLN02704335 flavonol synthase 100.0
PLN00417348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
KOG0143322 consensus Iron/ascorbate family oxidoreductases [S 100.0
PLN02403303 aminocyclopropanecarboxylate oxidase 100.0
PLN02984341 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN03001262 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PF0317198 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Ent 99.93
PF14226116 DIOX_N: non-haem dioxygenase in morphine synthesis 99.91
PLN03176120 flavanone-3-hydroxylase; Provisional 99.81
PF13640100 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; 97.01
PRK05467226 Fe(II)-dependent oxygenase superfamily protein; Pr 95.87
smart00702178 P4Hc Prolyl 4-hydroxylase alpha subunit homologues 95.26
PF12851171 Tet_JBP: Oxygenase domain of the 2OGFeDO superfami 95.18
TIGR02466201 conserved hypothetical protein. This family consis 87.24
PF13759101 2OG-FeII_Oxy_5: Putative 2OG-Fe(II) oxygenase; PDB 81.73
>PLN02276 gibberellin 20-oxidase Back     alignment and domain information 
Probab=100.00  E-value=1.8e-77  Score=557.70  Aligned_cols=294  Identities=24%  Similarity=0.378  Sum_probs=262.3

Q ss_pred             CCCceeeCCCCCCCCCCHHHHHHHHHHHHHHHhhcceEEEEcCCCChHHHHHHHHHHHHhcCCCHHHHhhhcCC-CCCCC
Q 040085            8 DEIPFLDFSGEVLDDFTDERWREMCGQVRDALETHGFFVMYHDKIPKSLREDMFKAMNALFDLPEETKSKYASS-KPYRS   86 (316)
Q Consensus         8 ~~iPvIDl~~~~l~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~-~~~~G   86 (316)
                      .+||||||+.+  .++++++|.+++++|.+||++||||||+|||||.++++++++++++||+||.|+|+++... ..++|
T Consensus        39 ~~iPvIDls~~--~~~~~~~~~~~~~~l~~Ac~~~GFF~l~nHGI~~~l~~~~~~~~~~FF~LP~eeK~k~~~~~~~~~G  116 (361)
T PLN02276         39 LAVPLIDLGGF--LSGDEAATAEAARLVREACLKHGFFQVVNHGVDAALIRAAHEYMDAFFKLPLSEKQRAQRKPGESCG  116 (361)
T ss_pred             CCCCeEEChhh--cCCChHHHHHHHHHHHHHHHHCcEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHHhhccCCCCccc
Confidence            57999999984  4556667888999999999999999999999999999999999999999999999998754 46789


Q ss_pred             CCCCCC-----CCCcceeeecCCCCCCCCchhhhhccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-cc
Q 040085           87 YMGESP-----AVPLHQSFGIDNEPGIDVDTTAQAFTNLMWPQGNPSFCETLKSVTSKMLELNYTILKMVFESFGTG-KL  160 (316)
Q Consensus        87 Y~~~~~-----~~d~~E~~~~~~~~~~~~~~~~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~-~~  160 (316)
                      |.+...     ..|++|.|.++.............+.+|.||+..++||+.+++|+..|.+++..||++|+++||++ ++
T Consensus       117 Y~~~~~~~~~~~~d~~E~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~  196 (361)
T PLN02276        117 YASSHTGRFSSKLPWKETLSFGYHADGGSSPVVVDYFKSVLGEDFEQFGKVYQEYCEAMKTLSLKIMELLGISLGVDRGY  196 (361)
T ss_pred             cCccCccccCCCCCeeeeEEEeccCcccccccchhcccccCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH
Confidence            977543     247999999875211111111223456789987889999999999999999999999999999999 89


Q ss_pred             hhhhccCccceeeeccccCCCCCCCCcccccccCCCceeEEeeCCCCceEEEecCCceEeccCCCCcEEEEhhHHHHHHh
Q 040085          161 YVPHIQGSITLFRLMKYKVPPNNESAVGLIPHTDKNVLSILCENNVQGLEILNKDGVYVPVGVPDNASVVIVGDTLKAWS  240 (316)
Q Consensus       161 f~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~HtD~~~lTlL~qd~~~GLqv~~~~g~W~~V~p~~g~~vVn~Gd~l~~~T  240 (316)
                      |.+++..+.+.||++|||+++.++..+|+++|||+|+||||+||+++||||+ ++|+|++|+|+||++|||+||+|++||
T Consensus       197 f~~~~~~~~~~lrl~~YP~~~~~~~~~g~~~HTD~g~lTlL~Qd~v~GLQV~-~~g~Wi~V~p~pgalVVNiGD~L~~~T  275 (361)
T PLN02276        197 YRKFFEDGDSIMRCNYYPPCQEPELTLGTGPHCDPTSLTILHQDQVGGLQVF-VDNKWRSVRPRPGALVVNIGDTFMALS  275 (361)
T ss_pred             HHHHhcCccceeeeEeCCCCCCcccccCCccccCCceeEEEEecCCCceEEE-ECCEEEEcCCCCCeEEEEcHHHHHHHh
Confidence            9888887789999999999988888899999999999999999999999997 799999999999999999999999999


Q ss_pred             CCCCcCCCceeecCCCCceEEEEEeeCCCCCCeeeCCCCcCCCCCCCCCCCcCHHHHHHHHHhc
Q 040085          241 NGRLKAPKHRVMMSGNKERYSFGSFSMPKEGVATEVPNELVDDDHPLVYRPFKFSEFMAYFVNN  304 (316)
Q Consensus       241 nG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~~~~~~~~~~~y~~~t~~e~~~~~~~~  304 (316)
                      ||+||||+|||+.++..+||||+||++|+.|++|.|+++++++++|++|+|+||+||++.+.++
T Consensus       276 NG~~kSt~HRVv~~~~~~R~Sia~F~~P~~d~~i~pl~~~v~~~~p~~y~~~~~~ey~~~~~~~  339 (361)
T PLN02276        276 NGRYKSCLHRAVVNSERERRSLAFFLCPKEDKVVRPPQELVDREGPRKYPDFTWSDLLEFTQKH  339 (361)
T ss_pred             CCccccccceeecCCCCCEEEEEEEecCCCCCEEeCChHhcCCCCCCcCCCCCHHHHHHHHHHh
Confidence            9999999999998888899999999999999999999999999999999999999999988877

>PTZ00273 oxidase reductase; Provisional Back     alignment and domain information
>PLN02216 protein SRG1 Back     alignment and domain information
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02254 gibberellin 3-beta-dioxygenase Back     alignment and domain information
>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02997 flavonol synthase Back     alignment and domain information
>PLN02485 oxidoreductase Back     alignment and domain information
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02393 leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>PLN02365 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>PLN02904 oxidoreductase Back     alignment and domain information
>PLN03178 leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02947 oxidoreductase Back     alignment and domain information
>PLN02156 gibberellin 2-beta-dioxygenase Back     alignment and domain information
>PLN02299 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>PLN02704 flavonol synthase Back     alignment and domain information
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] Back     alignment and domain information
>PLN02403 aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit Back     alignment and domain information
>PF14226 DIOX_N: non-haem dioxygenase in morphine synthesis N-terminal; PDB: 3OOX_A 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A Back     alignment and domain information
>PLN03176 flavanone-3-hydroxylase; Provisional Back     alignment and domain information
>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A Back     alignment and domain information
>PRK05467 Fe(II)-dependent oxygenase superfamily protein; Provisional Back     alignment and domain information
>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues Back     alignment and domain information
>PF12851 Tet_JBP: Oxygenase domain of the 2OGFeDO superfamily ; InterPro: IPR024779 TETs are 2OG- and Fe(II)-dependent oxygenases that catalyse the conversion of 5 methyl-Cytosine (5-MC) to 5-hydroxymethyl-cytosine (hmC) in cultured cells and in vitro [] Back     alignment and domain information
>TIGR02466 conserved hypothetical protein Back     alignment and domain information
>PF13759 2OG-FeII_Oxy_5: Putative 2OG-Fe(II) oxygenase; PDB: 3BVC_B 2RG4_A Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query316
2brt_A355 Anthocyanidin Synthase From Arabidopsis Thaliana Co 9e-14
1gp5_A356 Anthocyanidin Synthase From Arabidopsis Thaliana Co 1e-13
3oox_A312 Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenas 1e-13
1gp4_A356 Anthocyanidin Synthase From Arabidopsis Thaliana (S 2e-12
1w9y_A319 The Structure Of Acc Oxidase Length = 319 1e-11
3on7_A280 Crystal Structure Of A Putative Oxygenase (So_2589) 6e-05
>pdb|2BRT|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Naringenin Length = 355 Back     alignment and structure 
Iteration: 1

 Score = 74.3 bits (181), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 81/303 (26%), Positives = 134/303 (44%), Gaps = 19/303 (6%)
Query: 9   EIPFLDFSGEVLDDFTDERWREMC-GQVRDALETHGFFVMYHDKIPKSLREDMFKAMNAL 67
           ++P +D      DD   E+ RE C  +++ A    G   + +  IP  L E + KA    
Sbjct: 45  QVPTIDLKNIESDD---EKIRENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEF 101
Query: 68  FDLPEETKSKYASSKPYRSYMGESPAVPLHQSFGIDNEPGIDVDTTAQAFTNL-MWPQGN 126
           F L  E K KYA+ +      G    +  + S  ++ E         +   +L +WP+  
Sbjct: 102 FSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTP 161
Query: 127 PSFCETLKSVTSKMLELNYTILKMVFESFGTGKLYVP-----HIQGSITLFRLMK---YK 178
             + E   S  +K L L  T    VF++   G    P      + G   L   MK   Y 
Sbjct: 162 SDYIEA-TSEYAKCLRLLAT---KVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYP 217
Query: 179 VPPNNESAVGLIPHTDKNVLSILCENNVQGLEILNKDGVYVPVGVPDNASVVIVGDTLKA 238
             P  E A+G+  HTD + L+ +  N V GL++  +        VPD+  V+ +GDTL+ 
Sbjct: 218 KCPQPELALGVEAHTDVSALTFILHNMVPGLQLFYEGKWVTAKCVPDSI-VMHIGDTLEI 276
Query: 239 WSNGRLKAPKHRVMMSGNKERYSFGSFSM-PKEGVATEVPNELVDDDHPLVYRPFKFSEF 297
            SNG+ K+  HR +++  K R S+  F   PK+ +  +   E+V  + P  + P  F++ 
Sbjct: 277 LSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMVSVESPAKFPPRTFAQH 336
Query: 298 MAY 300
           + +
Sbjct: 337 IEH 339
>pdb|1GP5|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Trans-Dihydroquercetin Length = 356 Back     alignment and structure
>pdb|3OOX|A Chain A, Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenase Family Protein (Cc_0200) From Caulobacter Crescentus At 1.44 A Resolution Length = 312 Back     alignment and structure
>pdb|1GP4|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana (Selenomethionine Substituted) Length = 356 Back     alignment and structure
>pdb|1W9Y|A Chain A, The Structure Of Acc Oxidase Length = 319 Back     alignment and structure
>pdb|3ON7|A Chain A, Crystal Structure Of A Putative Oxygenase (So_2589) From Shewanella Oneidensis At 2.20 A Resolution Length = 280 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query316
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 9e-53
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 3e-48
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 2e-47
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 3e-42
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 2e-40
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 5e-39
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-05
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Length = 356 Back     alignment and structure
 Score =  175 bits (447), Expect = 9e-53
 Identities = 68/317 (21%), Positives = 126/317 (39%), Gaps = 27/317 (8%)

Query: 3   TDEVQDEIPFLDFSGEVLDDFTDERWREMCGQVRDALETHGFF-VMYHDKIPKSLREDMF 61
             E   ++P +D     ++   ++       +++ A    G   ++ H  IP  L E + 
Sbjct: 40  KKEDGPQVPTIDLKN--IESDDEKIRENCIEELKKASLDWGVMHLINHG-IPADLMERVK 96

Query: 62  KAMNALFDLPEETKSKYASSKPYRSYMGESPAVPLHQSFGIDNEPGID-VDT------TA 114
           KA    F L  E K KYA+ +      G             +    ++  D         
Sbjct: 97  KAGEEFFSLSVEEKEKYANDQATGKIQG------YGSKLANNASGQLEWEDYFFHLAYPE 150

Query: 115 QAFTNLMWPQGNPSFCETLKSVTSKMLELNYTILKMVFESFGTGKLYVP-HIQGSITLFR 173
           +     +WP+    + E        +  L   + K +    G     +   + G   L  
Sbjct: 151 EKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLL 210

Query: 174 LMK---YKVP--PNNESAVGLIPHTDKNVLSILCENNVQGLEILNKDGVYVPVGVPDNAS 228
            MK   Y  P  P  E A+G+  HTD + L+ +  N V GL++   +G +V      ++ 
Sbjct: 211 QMKINYY--PKCPQPELALGVEAHTDVSALTFILHNMVPGLQLF-YEGKWVTAKCVPDSI 267

Query: 229 VVIVGDTLKAWSNGRLKAPKHRVMMSGNKERYSFGSFSMPK-EGVATEVPNELVDDDHPL 287
           V+ +GDTL+  SNG+ K+  HR +++  K R S+  F  P  + +  +   E+V  + P 
Sbjct: 268 VMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMVSVESPA 327

Query: 288 VYRPFKFSEFMAYFVNN 304
            + P  F++ + + +  
Sbjct: 328 KFPPRTFAQHIEHKLFG 344
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Length = 319 Back     alignment and structure
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Length = 312 Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Length = 331 Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Length = 311 Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Length = 280 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query316
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 100.0
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 100.0
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 100.0
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 100.0
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 100.0
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 100.0
3dkq_A243 PKHD-type hydroxylase SBAL_3634; putative oxygenas 95.14
2rg4_A216 Uncharacterized protein; rhodobacterales, oceanico 94.27
3itq_A216 Prolyl 4-hydroxylase, alpha subunit domain protei; 88.53
2hbt_A247 EGL nine homolog 1; prolyl hydroxylase, hypoxia in 86.48
2jig_A224 Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A { 85.95
3tht_A345 Alkylated DNA repair protein ALKB homolog 8; struc 84.79
2iuw_A238 Alkylated repair protein ALKB homolog 3; oxidoredu 84.4
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Back     alignment and structure
Probab=100.00  E-value=4.7e-79  Score=559.02  Aligned_cols=291  Identities=21%  Similarity=0.350  Sum_probs=259.1

Q ss_pred             CCCCceeeCCCCCCCCCCHHHHHHHHHHHHHHHhhcceEEEEcCCCChHHHHHHHHHHHHhcCCCHHHHhhhcCC-CCCC
Q 040085            7 QDEIPFLDFSGEVLDDFTDERWREMCGQVRDALETHGFFVMYHDKIPKSLREDMFKAMNALFDLPEETKSKYASS-KPYR   85 (316)
Q Consensus         7 ~~~iPvIDl~~~~l~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~-~~~~   85 (316)
                      ..+||||||+.+  .+    .+.+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++... ..++
T Consensus         4 ~~~iPvIDls~~--~~----~~~~~~~~l~~A~~~~GFf~v~nHGi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~   77 (312)
T 3oox_A            4 TSAIDPVSFSLY--AK----DFTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGVKGGAR   77 (312)
T ss_dssp             CCSSCCEETHHH--HH----CHHHHHHHHHHHHHHHSEEEEESCCSCHHHHHHHHHHHHHHHTSCHHHHGGGBSSGGGTS
T ss_pred             CCCCCeEEChHh--cc----cHHHHHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHhhhccCCCCcc
Confidence            568999999974  21    3568999999999999999999999999999999999999999999999999863 4678


Q ss_pred             CCCCCCC-------CCCcceeeecCCCCCCCCchhhhhccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 040085           86 SYMGESP-------AVPLHQSFGIDNEPGIDVDTTAQAFTNLMWPQGNPSFCETLKSVTSKMLELNYTILKMVFESFGTG  158 (316)
Q Consensus        86 GY~~~~~-------~~d~~E~~~~~~~~~~~~~~~~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~  158 (316)
                      ||.+.+.       ..|++|.|.++.+.... ......+.+|.||+.+|+||+.+++|+++|.+++..|+++|+++||++
T Consensus        78 Gy~~~g~e~~~~~~~~D~kE~~~~~~~~~~~-~~~~~~~~~n~wP~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~  156 (312)
T 3oox_A           78 GYIPFGVETAKGADHYDLKEFWHMGRDLPPG-HRFRAHMADNVWPAEIPAFKHDVSWLYNSLDGMGGKVLEAIATYLKLE  156 (312)
T ss_dssp             EEECCCCCCSTTSCSCCCCEEEEECCCCCTT-CGGGGTSCCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC
T ss_pred             ccccccceecCCCCCCCceeeeEeecCCCcC-CcchhccCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcC
Confidence            9976543       24899999987633221 112234567899999999999999999999999999999999999999


Q ss_pred             -cchhhhccCccceeeeccccCCCCCCCCcccccccCCCceeEEeeCCCCceEEEecCCceEeccCCCCcEEEEhhHHHH
Q 040085          159 -KLYVPHIQGSITLFRLMKYKVPPNNESAVGLIPHTDKNVLSILCENNVQGLEILNKDGVYVPVGVPDNASVVIVGDTLK  237 (316)
Q Consensus       159 -~~f~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~HtD~~~lTlL~qd~~~GLqv~~~~g~W~~V~p~~g~~vVn~Gd~l~  237 (316)
                       ++|.+.+..+.+.||++||||++.++..+|+++|||+|+||||+||+++||||++++|+|++|+|+||++|||+||+||
T Consensus       157 ~~~f~~~~~~~~~~lr~~~Ypp~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~  236 (312)
T 3oox_A          157 RDFFKPTVQDGNSVLRLLHYPPIPKDATGVRAGAHGDINTITLLLGAEEGGLEVLDRDGQWLPINPPPGCLVINIGDMLE  236 (312)
T ss_dssp             TTTTHHHHTTCCCEEEEEEECCCSSCCC--CEEEECCCSSEEEEECCTTSCEEEECTTSCEEECCCCSSCEEEEECHHHH
T ss_pred             HHHHHHHhcCCcceeeeEecCCCCCCcCCcCccceecCceEEEEeEcCcCceEEECCCCcEEECCCCCCeEEEEhHHHHH
Confidence             8998888888899999999998875555999999999999999999999999999999999999999999999999999


Q ss_pred             HHhCCCCcCCCceeecCC----CCceEEEEEeeCCCCCCeeeCCCCcCCCCCCCCCC-CcCHHHHHHHHHhc
Q 040085          238 AWSNGRLKAPKHRVMMSG----NKERYSFGSFSMPKEGVATEVPNELVDDDHPLVYR-PFKFSEFMAYFVNN  304 (316)
Q Consensus       238 ~~TnG~~ks~~HRV~~~~----~~~R~Si~~F~~P~~d~~i~p~~~~~~~~~~~~y~-~~t~~e~~~~~~~~  304 (316)
                      +||||+||||+|||+.++    ..+|||++||++|+.|++|.|+++++++++|++|+ ++|++||++.+++.
T Consensus       237 ~~TnG~~kS~~HRVv~~~~~~~~~~R~Sia~F~~P~~d~~i~pl~~~v~~~~p~~y~~~~t~~eyl~~r~~~  308 (312)
T 3oox_A          237 RLTNNVLPSTVHRVVNPPPERRGVPRYSTPFFLHFASDYEIKTLQNCVTAENPDRYPESITADEFLQQRLRE  308 (312)
T ss_dssp             HHTTTSSCCCCEEECCCCGGGTTSCEEECCEEECCCTTCEECCCGGGCCSSSCCSCSSCEEHHHHHHHHHHH
T ss_pred             HHhCCeecCCCceEeCCCccCCCCCEEEEEEEecCCCCcEEecCccccCCCCcccCCCCeeHHHHHHHHHHH
Confidence            999999999999998764    46799999999999999999999999999999999 99999999999875
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Back     alignment and structure
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Back     alignment and structure
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155} Back     alignment and structure
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A Back     alignment and structure
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str} Back     alignment and structure
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A* Back     alignment and structure
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A Back     alignment and structure
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A* Back     alignment and structure
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 316
d1gp6a_349 b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cr 2e-45
d1w9ya1307 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxyla 5e-42
d1dcsa_311 b.82.2.1 (A:) Deacetoxycephalosporin C synthase {S 9e-35
d1odma_329 b.82.2.1 (A:) Isopenicillin N synthase {Emericella 4e-25
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 349 Back     information, alignment and structure

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  155 bits (393), Expect = 2e-45
 Identities = 67/314 (21%), Positives = 131/314 (41%), Gaps = 9/314 (2%)

Query: 3   TDEVQDEIPFLDFSGEVLDDFTDERWREMCGQVRDALETHGFFVMYHDKIPKSLREDMFK 62
             E   ++P +D     ++   ++       +++ A    G   + +  IP  L E + K
Sbjct: 39  KKEDGPQVPTIDLKN--IESDDEKIRENCIEELKKASLDWGVMHLINHGIPADLMERVKK 96

Query: 63  AMNALFDLPEETKSKYASSKPYRSYMGESPAVPLHQSFGIDNEPGIDVDTTAQAFTNL-M 121
           A    F L  E K KYA+ +      G    +  + S  ++ E         +   +L +
Sbjct: 97  AGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSI 156

Query: 122 WPQGNPSFCETLKSVTSKMLELNYTILKMVFESFGTGKLY----VPHIQGSITLFRLMKY 177
           WP+    + E        +  L   + K +    G         V  ++  +   ++  Y
Sbjct: 157 WPKTPSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYY 216

Query: 178 KVPPNNESAVGLIPHTDKNVLSILCENNVQGLEILNKDGVYVPVGVPDNASVVIVGDTLK 237
              P  E A+G+  HTD + L+ +  N V GL++   +G +V      ++ V+ +GDTL+
Sbjct: 217 PKCPQPELALGVEAHTDVSALTFILHNMVPGLQL-FYEGKWVTAKCVPDSIVMHIGDTLE 275

Query: 238 AWSNGRLKAPKHRVMMSGNKERYSFGSFSMP-KEGVATEVPNELVDDDHPLVYRPFKFSE 296
             SNG+ K+  HR +++  K R S+  F  P K+ +  +   E+V  + P  + P  F++
Sbjct: 276 ILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMVSVESPAKFPPRTFAQ 335

Query: 297 FMAYFVNNISDDAL 310
            + + +     + L
Sbjct: 336 HIEHKLFGKEQEEL 349
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Length = 307 Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Length = 311 Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Length = 329 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query316
d1gp6a_349 Anthocyanidin synthase {Mouse-ear cress (Arabidops 100.0
d1w9ya1307 1-aminocyclopropane-1-carboxylate oxidase 1 {Petun 100.0
d1odma_329 Isopenicillin N synthase {Emericella nidulans [Tax 100.0
d1dcsa_311 Deacetoxycephalosporin C synthase {Streptomyces cl 100.0
d2iuwa1210 AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606] 91.86
d2fdia1200 Alkylated DNA repair protein AlkB {Escherichia col 83.35
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=3.2e-73  Score=526.75  Aligned_cols=288  Identities=21%  Similarity=0.336  Sum_probs=249.0

Q ss_pred             CCCCceeeCCCCCCCCCCHHHHHHHHHHHHHHHhhcceEEEEcCCCChHHHHHHHHHHHHhcCCCHHHHhhhcCCC---C
Q 040085            7 QDEIPFLDFSGEVLDDFTDERWREMCGQVRDALETHGFFVMYHDKIPKSLREDMFKAMNALFDLPEETKSKYASSK---P   83 (316)
Q Consensus         7 ~~~iPvIDl~~~~l~~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~~---~   83 (316)
                      ..+||||||+.  +.+++++.|++++++|.+||+++|||||+||||+.++++++++++++||+||.|+|+++....   .
T Consensus        43 ~~~IPvIDls~--l~~~d~~~r~~~~~~l~~A~~~~GFf~l~nHGI~~~li~~~~~~~~~FF~lP~eeK~k~~~~~~~~~  120 (349)
T d1gp6a_          43 GPQVPTIDLKN--IESDDEKIRENCIEELKKASLDWGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGK  120 (349)
T ss_dssp             SCCCCEEECTT--TTCSCHHHHHHHHHHHHHHHHHTSEEEEESCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTB
T ss_pred             CCCcCeEEChh--cCCCCHHHHHHHHHHHHHHHHhCCEEEEEccCCCHHHHHHHHHHHHHHHcCCHHHHhhhhcccccCC
Confidence            46899999999  467788789999999999999999999999999999999999999999999999999997543   2


Q ss_pred             CCCCCCCCC-----CCCcceeeecCCCCCCCCchhhhhccCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 040085           84 YRSYMGESP-----AVPLHQSFGIDNEPGIDVDTTAQAFTNLMWPQGNPSFCETLKSVTSKMLELNYTILKMVFESFGTG  158 (316)
Q Consensus        84 ~~GY~~~~~-----~~d~~E~~~~~~~~~~~~~~~~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~  158 (316)
                      +.||.....     ..++.+.+....       ........|.||+..+.|++.+++|++.|.+++..|+++++++||++
T Consensus       121 ~~~~g~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~n~wp~~~~~f~e~~~~~~~~~~~la~~ll~~la~~Lgl~  193 (349)
T d1gp6a_         121 IQGYGSKLANNASGQLEWEDYFFHLA-------YPEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKALSVGLGLE  193 (349)
T ss_dssp             CSEEECCCCCSTTCCCCSCEEEEEEE-------ESGGGCCGGGSCCSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC
T ss_pred             ccccccccccccccccchhhhhcccc-------cccccccccccccccchHHHHHHHHHHHHHHHHHhhhHHHHHHcCCC
Confidence            333322211     112222211110       01123346789999999999999999999999999999999999999


Q ss_pred             -cchhhhc---cCccceeeeccccCCCCCCCCcccccccCCCceeEEeeCCCCceEEEecCCceEeccCCCCcEEEEhhH
Q 040085          159 -KLYVPHI---QGSITLFRLMKYKVPPNNESAVGLIPHTDKNVLSILCENNVQGLEILNKDGVYVPVGVPDNASVVIVGD  234 (316)
Q Consensus       159 -~~f~~~~---~~~~~~lr~~~Yp~~~~~~~~~~~~~HtD~~~lTlL~qd~~~GLqv~~~~g~W~~V~p~~g~~vVn~Gd  234 (316)
                       ++|.+.+   ..+.+.||++|||+++.+...+|+++|||+|+||||+|+.++||||+ ++|+|++|+|.+|++|||+||
T Consensus       194 ~~~~~~~~~~~~~~~~~lrl~~Yp~~~~~~~~~g~~~HtD~g~lTlL~q~~~~GLqv~-~~g~W~~V~p~~~a~vVNvGD  272 (349)
T d1gp6a_         194 PDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLF-YEGKWVTAKCVPDSIVMHIGD  272 (349)
T ss_dssp             TTHHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEEEEEECSCCCEEEE-ETTEEEECCCCTTCEEEEECH
T ss_pred             HHHHHHHhccccccceeeeecccccccchhhccccccCCCCcceEEEeccCCcceeee-cCCceEEccCCCCCeeeeHHh
Confidence             8887665   34567899999999988888899999999999999999999999995 689999999999999999999


Q ss_pred             HHHHHhCCCCcCCCceeecCCCCceEEEEEeeCCCCCCee-eCCCCcCCCCCCCCCCCcCHHHHHHHHHhc
Q 040085          235 TLKAWSNGRLKAPKHRVMMSGNKERYSFGSFSMPKEGVAT-EVPNELVDDDHPLVYRPFKFSEFMAYFVNN  304 (316)
Q Consensus       235 ~l~~~TnG~~ks~~HRV~~~~~~~R~Si~~F~~P~~d~~i-~p~~~~~~~~~~~~y~~~t~~e~~~~~~~~  304 (316)
                      +||+||||+||||+|||+.+++.+||||+||++|+.|++| .|+++++++++|++|+|||++||++.|+..
T Consensus       273 ~l~~~TnG~~~St~HRVv~~~~~~R~Si~~F~~p~~d~~i~~pl~~~v~~~~p~~y~~~t~~e~~~~rl~~  343 (349)
T d1gp6a_         273 TLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMVSVESPAKFPPRTFAQHIEHKLFG  343 (349)
T ss_dssp             HHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCEECCCGGGCCSSSCCSSCCEEHHHHHHHHHHH
T ss_pred             HHHHHhCCCccCcCccccCCCCCCeEEEEEEecCCCcceeecCCHHHcCCCCCCCCCCccHHHHHHHHHhc
Confidence            9999999999999999999988899999999999999865 899999999999999999999999998865
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d2iuwa1 b.82.2.10 (A:70-279) AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2fdia1 b.82.2.10 (A:15-214) Alkylated DNA repair protein AlkB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure