Citrus Sinensis ID: 040171

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------33
MRTKCSFLLFFIFILPLALAKLTPNFYSSSCPEAESIIFNVVQRRFNTDRSITGALLRMHFHDCFSGNVCDASILIDSTIRSQPEKDSGSNLTVRGYEIIDEIKNAVEQKCPSTVSCADIIALATRDAVALAGGLNYSLPTGRLDGLRSNADEVNLPGTSLSVPNVLQMFAEKGFNTTETVVILGAHTVGVVHCSFFQDRLADSDMDPAFAQELSKACEASSGSDDPMTNLDRGTPTSLDSQYYNQTLFKRGVLQIDQALALDASTHDIVAHFANDEDDFQLSFANVMVKLGSLQVLTDGQGEIRQNCRAFNRDNNANKPNRGRGLKRA
ccHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHccccHHHHHHHccccccccccccccEEcccccccccccccccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccHHHHHHHHHHccccccccHHcccccccccccccccccccccccccHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHccccccccHHHHccccHHHHHHHHHccHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccc
cHHHHHHHHHHHHHHHcHccccEccccccccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHcccccccHHHcccccccccHHHccccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHcccccccccEccEEcccccHHHHHcccccccHHHHHHHHHHccccHHHHHHHccccHcccHHHHHHHHHcccccccHHHHHHHHHHccccccccccEEEcccccccccccHHHHHHHccccccHHHHHHHHccccHHHHHHHHHcHHHHHHHHHHHHHHHcccccEEHHHcEcccccccccccccccHHHHHHHcccc
MRTKCSFLLFFIFILPLALakltpnfyssscpeaeSIIFNVVQRRFNTDRSITGALLRMHFhdcfsgnvcdasilidstirsqpekdsgsnltvRGYEIIDEIKNAveqkcpstvsCADIIALATRDAVALAGglnyslptgrldglrsnadevnlpgtslsvPNVLQMFAEKGFNTTETVVILGAHTVGVVHCsffqdrladsdmdPAFAQELSKAceassgsddpmtnldrgtptsldsqyynqtlfkRGVLQIDQALALDASTHDIVAhfandeddfQLSFANVMVKLGSLqvltdgqgeirqncrafnrdnnankpnrgrglkra
MRTKCSFLLFFIFILPLALAKLTPNFYSSSCPEAESIIFNVVQRRFNTDRSITGALLRMHFHDCFSGNVCDASILIDSTirsqpekdsgsnltVRGYEIIDEIKNAVEQKCPSTVSCADIIALATRDAVALAGGLNYSLPTGRLDGLRSNADEVNLPGTSLSVPNVLQMFAEKGFNTTETVVILGAHTVGVVHCSFFQDRLADSDMDPAFAQELSKACeassgsddpmtnLDRGTPTSLDSQYYNQTLFKRGVLQIDQALALDASTHDIVAHFANDEDDFQLSFANVMVKLGSLQVLTDGQGEIRqncrafnrdnnankpnrgrglkra
MRTKCSfllffifilplalaklTPNFYSSSCPEAESIIFNVVQRRFNTDRSITGALLRMHFHDCFSGNVCDASILIDSTIRSQPEKDSGSNLTVRGYEIIDEIKNAVEQKCPSTVSCADIIALATRDAVALAGGLNYSLPTGRLDGLRSNADEVNLPGTSLSVPNVLQMFAEKGFNTTETVVILGAHTVGVVHCSFFQDRLADSDMDPAFAQELSKACEASSGSDDPMTNLDRGTPTSLDSQYYNQTLFKRGVLQIDQALALDASTHDIVAHFANDEDDFQLSFANVMVKLGSLQVLTDGQGEIRQNCRAFNRDNNANKPNRGRGLKRA
****CSFLLFFIFILPLALAKLTPNFYSSSCPEAESIIFNVVQRRFNTDRSITGALLRMHFHDCFSGNVCDASILIDSTI***********LTVRGYEIIDEIKNAVEQKCPSTVSCADIIALATRDAVALAGGLNYSLPTGRLDGLRSNADEVNLPGTSLSVPNVLQMFAEKGFNTTETVVILGAHTVGVVHCSFFQDRL****************************************QYYNQTLFKRGVLQIDQALALDASTHDIVAHFANDEDDFQLSFANVMVKLGSLQVLTDGQGEIRQNC*********************
***KCSFLLFFIFILPLALAKLTPNFYSSSCPEAESIIFNVVQRRFNTDRSITGALLRMHFHDCFSGNVCDASILIDSTIR****KDSGSNLTVRGYEIIDEIKNAVEQKCPSTVSCADIIALATRDAVALAGGLNYSLPTGRLDGLRSNADEVNLPGTSLSVPNVLQMFAEKGFNTTETVVILGAHTVGVVHCSFFQDRLADSDMDPAFAQELSKA********DPMTNLDRGTPTSLDSQYYNQTLFKRGVLQIDQALALDASTHDIVAHFANDEDDFQLSFANVMVKLGSLQVLTDGQGEIRQNCRA*******************
MRTKCSFLLFFIFILPLALAKLTPNFYSSSCPEAESIIFNVVQRRFNTDRSITGALLRMHFHDCFSGNVCDASILIDSTIRS********NLTVRGYEIIDEIKNAVEQKCPSTVSCADIIALATRDAVALAGGLNYSLPTGRLDGLRSNADEVNLPGTSLSVPNVLQMFAEKGFNTTETVVILGAHTVGVVHCSFFQDRLADSDMDPAFAQE**************MTNLDRGTPTSLDSQYYNQTLFKRGVLQIDQALALDASTHDIVAHFANDEDDFQLSFANVMVKLGSLQVLTDGQGEIRQNCRAFNRDNNANK**********
MRTKCSFLLFFIFILPLALAKLTPNFYSSSCPEAESIIFNVVQRRFNTDRSITGALLRMHFHDCFSGNVCDASILIDSTIRSQPEKD*GSNLTVRGYEIIDEIKNAVEQKCPSTVSCADIIALATRDAVALAGGLNYSLPTGRLDGLRSNADEVNLPGTSLSVPNVLQMFAEKGFNTTETVVILGAHTVGVVHCSFFQDRLADSDMDPAFAQELSKACEASSGSDDPMTNLDRGTPTSLDSQYYNQTLFKRGVLQIDQALALDASTHDIVAHFANDEDDFQLSFANVMVKLGSLQVLTDGQGEIRQNCRAFNR****************
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MRTKCSFLLFFIFILPLALAKLTPNFYSSSCPEAESIIFNVVQRRFNTDRSITGALLRMHFHDCFSGNVCDASILIDSTIRSQPEKDSGSNLTVRGYEIIDEIKNAVEQKCPSTVSCADIIALATRDAVALAGGLNYSLPTGRLDGLRSNADEVNLPGTSLSVPNVLQMFAEKGFNTTETVVILGAHTVGVVHCSFFQDRLADSDMDPAFAQELSKACEASSGSDDPMTNLDRGTPTSLDSQYYNQTLFKRGVLQIDQALALDASTHDIVAHFANDEDDFQLSFANVMVKLGSLQVLTDGQGEIRQNCRAFNRDNNANKPNRGRGLKRA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query329 2.2.26 [Sep-21-2011]
Q93V93310 Peroxidase 44 OS=Arabidop yes no 0.936 0.993 0.514 5e-88
Q43729313 Peroxidase 57 OS=Arabidop no no 0.911 0.958 0.495 3e-81
Q9SS67321 Peroxidase 28 OS=Arabidop no no 0.917 0.940 0.484 7e-79
Q9LNL0310 Peroxidase 8 OS=Arabidops no no 0.936 0.993 0.466 7e-78
Q9FMR0331 Peroxidase 60 OS=Arabidop no no 0.890 0.885 0.446 2e-64
Q9SZB9325 Peroxidase 47 OS=Arabidop no no 0.914 0.926 0.423 3e-63
P22196330 Cationic peroxidase 2 OS= N/A no 0.914 0.912 0.423 9e-63
Q43872317 Peroxidase 64 OS=Arabidop no no 0.905 0.940 0.375 2e-61
Q43387328 Peroxidase 71 OS=Arabidop no no 0.927 0.929 0.397 1e-58
Q9LT91322 Peroxidase 66 OS=Arabidop no no 0.917 0.937 0.416 7e-58
>sp|Q93V93|PER44_ARATH Peroxidase 44 OS=Arabidopsis thaliana GN=PER44 PE=2 SV=1 Back     alignment and function desciption
 Score =  324 bits (831), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 161/313 (51%), Positives = 211/313 (67%), Gaps = 5/313 (1%)

Query: 1   MRTKCSFLLFFIFILPLALAKLTPNFYSSSCPEAESIIFNVVQRRFNTDRSITGALLRMH 60
           MR+  +    F F+ P ALA+L   FYS SCP AESI+ +VV  RF +D+SIT A LRM 
Sbjct: 1   MRSITALFFLFCFLAPSALAQLRTGFYSRSCPRAESIVASVVANRFRSDKSITAAFLRMQ 60

Query: 61  FHDCFSGNVCDASILIDSTIRSQPEKDSGSNLTVRGYEIIDEIKNAVEQKCPSTVSCADI 120
           FHDCF    CDAS+LID       EK +G N +VRGYEIIDE K  +E  CP TVSCADI
Sbjct: 61  FHDCFVRG-CDASLLIDPRPGRPSEKSTGPNASVRGYEIIDEAKRQLEAACPRTVSCADI 119

Query: 121 IALATRDAVALAGGLNYSLPTGRLDGLRSNADEVNLPGTSLSVPNVLQMFAEKGFNTTET 180
           + LATRD+VALAGG  +S+PTGR DGLRSN ++VNLPG ++ V   +Q+FA +G NT + 
Sbjct: 120 VTLATRDSVALAGGPRFSVPTGRRDGLRSNPNDVNLPGPTIPVSASIQLFAAQGMNTNDM 179

Query: 181 VVIL-GAHTVGVVHCSFFQDRLADSDMDPAFAQELSKACEASSGSDDPMTNLDRGTPTSL 239
           V ++ G H+VGV HCS FQDRL+D  M+P+    L + C   S  +DP T LD+ T  ++
Sbjct: 180 VTLIGGGHSVGVAHCSLFQDRLSDRAMEPSLKSSLRRKC---SSPNDPTTFLDQKTSFTV 236

Query: 240 DSQYYNQTLFKRGVLQIDQALALDASTHDIVAHFANDEDDFQLSFANVMVKLGSLQVLTD 299
           D+  Y +   +RG+L+IDQ L LD ST  IV+ +A+    F+  FA  +VK+G+++VLT 
Sbjct: 237 DNAIYGEIRRQRGILRIDQNLGLDRSTSGIVSGYASSNTLFRKRFAEALVKMGTIKVLTG 296

Query: 300 GQGEIRQNCRAFN 312
             GEIR+NCR FN
Sbjct: 297 RSGEIRRNCRVFN 309
Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: 1EC: .EC: 1EC: .EC: 7
>sp|Q43729|PER57_ARATH Peroxidase 57 OS=Arabidopsis thaliana GN=PER57 PE=1 SV=1 Back     alignment and function description
>sp|Q9SS67|PER28_ARATH Peroxidase 28 OS=Arabidopsis thaliana GN=PER28 PE=2 SV=1 Back     alignment and function description
>sp|Q9LNL0|PER8_ARATH Peroxidase 8 OS=Arabidopsis thaliana GN=PER8 PE=2 SV=1 Back     alignment and function description
>sp|Q9FMR0|PER60_ARATH Peroxidase 60 OS=Arabidopsis thaliana GN=PER60 PE=1 SV=1 Back     alignment and function description
>sp|Q9SZB9|PER47_ARATH Peroxidase 47 OS=Arabidopsis thaliana GN=PER47 PE=2 SV=2 Back     alignment and function description
>sp|P22196|PER2_ARAHY Cationic peroxidase 2 OS=Arachis hypogaea GN=PNC2 PE=2 SV=1 Back     alignment and function description
>sp|Q43872|PER64_ARATH Peroxidase 64 OS=Arabidopsis thaliana GN=PER64 PE=1 SV=1 Back     alignment and function description
>sp|Q43387|PER71_ARATH Peroxidase 71 OS=Arabidopsis thaliana GN=PER71 PE=1 SV=1 Back     alignment and function description
>sp|Q9LT91|PER66_ARATH Peroxidase 66 OS=Arabidopsis thaliana GN=PER66 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query329
224123918311 predicted protein [Populus trichocarpa] 0.936 0.990 0.571 2e-95
255569410324 Peroxidase 44 precursor, putative [Ricin 0.914 0.929 0.568 5e-94
356504340314 PREDICTED: peroxidase 44-like [Glycine m 0.917 0.961 0.560 1e-91
357508881315 Peroxidase [Medicago truncatula] gi|1243 0.902 0.942 0.553 4e-91
356506206312 PREDICTED: peroxidase 44-like [Glycine m 0.933 0.983 0.555 5e-91
356573873320 PREDICTED: peroxidase 44-like [Glycine m 0.930 0.956 0.538 4e-88
18416663310 peroxidase 44 [Arabidopsis thaliana] gi| 0.936 0.993 0.514 3e-86
297803498312 hypothetical protein ARALYDRAFT_354185 [ 0.936 0.987 0.520 4e-86
297803500312 hypothetical protein ARALYDRAFT_913963 [ 0.936 0.987 0.520 4e-86
4538930319 putative peroxidase [Arabidopsis thalian 0.939 0.968 0.501 5e-85
>gi|224123918|ref|XP_002319196.1| predicted protein [Populus trichocarpa] gi|222857572|gb|EEE95119.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  355 bits (911), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 179/313 (57%), Positives = 219/313 (69%), Gaps = 5/313 (1%)

Query: 1   MRTKCSFLLFFIFILPLALAKLTPNFYSSSCPEAESIIFNVVQRRFNTDRSITGALLRMH 60
           M  K SFLL  +FI+P  LA L   FY  +CP+AESIIF  VQ+RFNTD+S+T ALLRMH
Sbjct: 3   MGMKSSFLLI-LFIVPAVLADLRVGFYKPTCPDAESIIFQAVQKRFNTDKSVTAALLRMH 61

Query: 61  FHDCFSGNVCDASILIDSTIRSQPEKDSGSNLTVRGYEIIDEIKNAVEQKCPSTVSCADI 120
           FHDCF    CDASILIDST ++Q EKD+G N TVR YE+IDEIK A+E KCPS VSCADI
Sbjct: 62  FHDCFVRG-CDASILIDSTTQNQAEKDAGPNQTVREYELIDEIKKALEAKCPSKVSCADI 120

Query: 121 IALATRDAVALAGGLNYSLPTGRLDGLRSNADEVNLPGTSLSVPNVLQMFAEKGFNTTET 180
           I +ATRDAV LAGG NY++PTGR DGL S A +VNLPG  + V    Q+F  KG    E 
Sbjct: 121 ITVATRDAVVLAGGPNYTVPTGRRDGLVSRAGDVNLPGPQVDVSQAFQIFRAKGLTLEEM 180

Query: 181 VVILGAHTVGVVHCSFFQDRLA-DSDMDPAFAQELSKACEASSGSDDPMTNLDRGTPTSL 239
           V++LGAHTVGV HCSFF +RL  D  MD   A  LS  C  ++ + DP   LD+GT   +
Sbjct: 181 VILLGAHTVGVAHCSFFSERLQNDPSMDANLAANLSNVC--ANPNTDPTVLLDQGTGFVV 238

Query: 240 DSQYYNQTLFKRGVLQIDQALALDASTHDIVAHFANDEDDFQLSFANVMVKLGSLQVLTD 299
           D+++Y Q L KRG++ IDQ LA+D+ST   V+ FA D + F+ SF   MVK+GS+ VL  
Sbjct: 239 DNEFYKQLLLKRGIMHIDQELAIDSSTSGFVSRFARDGNGFKQSFGKAMVKMGSVGVLVG 298

Query: 300 GQGEIRQNCRAFN 312
             GE+R+NCR FN
Sbjct: 299 NGGEVRKNCRVFN 311

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255569410|ref|XP_002525672.1| Peroxidase 44 precursor, putative [Ricinus communis] gi|223534972|gb|EEF36655.1| Peroxidase 44 precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356504340|ref|XP_003520954.1| PREDICTED: peroxidase 44-like [Glycine max] Back     alignment and taxonomy information
>gi|357508881|ref|XP_003624729.1| Peroxidase [Medicago truncatula] gi|124360457|gb|ABN08467.1| Haem peroxidase, plant/fungal/bacterial [Medicago truncatula] gi|355499744|gb|AES80947.1| Peroxidase [Medicago truncatula] Back     alignment and taxonomy information
>gi|356506206|ref|XP_003521878.1| PREDICTED: peroxidase 44-like [Glycine max] Back     alignment and taxonomy information
>gi|356573873|ref|XP_003555080.1| PREDICTED: peroxidase 44-like [Glycine max] Back     alignment and taxonomy information
>gi|18416663|ref|NP_567738.1| peroxidase 44 [Arabidopsis thaliana] gi|26397719|sp|Q93V93.1|PER44_ARATH RecName: Full=Peroxidase 44; Short=Atperox P44; AltName: Full=ATP35; Flags: Precursor gi|15724252|gb|AAL06519.1|AF412066_1 AT4g26010/F20B18_120 [Arabidopsis thaliana] gi|16226555|gb|AAL16199.1|AF428430_1 AT4g26010/F20B18_120 [Arabidopsis thaliana] gi|17530566|gb|AAL40850.1|AF452386_1 class III peroxidase ATP35 [Arabidopsis thaliana] gi|19699110|gb|AAL90921.1| AT4g26010/F20B18_120 [Arabidopsis thaliana] gi|332659744|gb|AEE85144.1| peroxidase 44 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297803498|ref|XP_002869633.1| hypothetical protein ARALYDRAFT_354185 [Arabidopsis lyrata subsp. lyrata] gi|297315469|gb|EFH45892.1| hypothetical protein ARALYDRAFT_354185 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|297803500|ref|XP_002869634.1| hypothetical protein ARALYDRAFT_913963 [Arabidopsis lyrata subsp. lyrata] gi|297315470|gb|EFH45893.1| hypothetical protein ARALYDRAFT_913963 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|4538930|emb|CAB39666.1| putative peroxidase [Arabidopsis thaliana] gi|7269452|emb|CAB79456.1| putative peroxidase [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query329
TAIR|locus:2120760310 AT4G26010 [Arabidopsis thalian 0.860 0.912 0.527 8.1e-76
TAIR|locus:2175951313 AT5G17820 [Arabidopsis thalian 0.844 0.888 0.498 4.3e-70
TAIR|locus:2096419321 AT3G03670 [Arabidopsis thalian 0.857 0.878 0.483 3.5e-68
TAIR|locus:2009318310 AT1G34510 [Arabidopsis thalian 0.860 0.912 0.486 5.6e-68
TAIR|locus:2176402331 RHS18 "root hair specific 18" 0.848 0.842 0.459 1.9e-60
TAIR|locus:2119251325 AT4G33420 [Arabidopsis thalian 0.857 0.867 0.437 8.1e-60
TAIR|locus:2165820317 PER64 "peroxidase 64" [Arabido 0.854 0.886 0.383 2.9e-55
TAIR|locus:2164366328 AT5G64120 [Arabidopsis thalian 0.851 0.853 0.420 1.3e-54
TAIR|locus:2012597315 PER4 "peroxidase 4" [Arabidops 0.872 0.911 0.393 7e-54
TAIR|locus:2166508322 AT5G51890 [Arabidopsis thalian 0.863 0.881 0.436 1.5e-53
TAIR|locus:2120760 AT4G26010 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 764 (274.0 bits), Expect = 8.1e-76, P = 8.1e-76
 Identities = 152/288 (52%), Positives = 198/288 (68%)

Query:    26 FYSSSCPEAESIIFNVVQRRFNTDRSITGALLRMHFHDCFSGNVCDASILIDSTIRSQPE 85
             FYS SCP AESI+ +VV  RF +D+SIT A LRM FHDCF    CDAS+LID       E
Sbjct:    26 FYSRSCPRAESIVASVVANRFRSDKSITAAFLRMQFHDCFVRG-CDASLLIDPRPGRPSE 84

Query:    86 KDSGSNLTVRGYEIIDEIKNAVEQKCPSTVSCADIIALATRDAVALAGGLNYSLPTGRLD 145
             K +G N +VRGYEIIDE K  +E  CP TVSCADI+ LATRD+VALAGG  +S+PTGR D
Sbjct:    85 KSTGPNASVRGYEIIDEAKRQLEAACPRTVSCADIVTLATRDSVALAGGPRFSVPTGRRD 144

Query:   146 GLRSNADEVNLPGTSLSVPNVLQMFAEKGFNTTETVVILGA-HTVGVVHCSFFQDRLADS 204
             GLRSN ++VNLPG ++ V   +Q+FA +G NT + V ++G  H+VGV HCS FQDRL+D 
Sbjct:   145 GLRSNPNDVNLPGPTIPVSASIQLFAAQGMNTNDMVTLIGGGHSVGVAHCSLFQDRLSDR 204

Query:   205 DMDPAFAQELSKACEASSGSDDPMTNLDRGTPTSLDSQYYNQTLFKRGVLQIDQALALDA 264
              M+P+    L + C   S  +DP T LD+ T  ++D+  Y +   +RG+L+IDQ L LD 
Sbjct:   205 AMEPSLKSSLRRKC---SSPNDPTTFLDQKTSFTVDNAIYGEIRRQRGILRIDQNLGLDR 261

Query:   265 STHDIVAHFANDEDDFQLSFANVMVKLGSLQVLTDGQGEIRQNCRAFN 312
             ST  IV+ +A+    F+  FA  +VK+G+++VLT   GEIR+NCR FN
Sbjct:   262 STSGIVSGYASSNTLFRKRFAEALVKMGTIKVLTGRSGEIRRNCRVFN 309
GO:0004601 "peroxidase activity" evidence=IEA;ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0006979 "response to oxidative stress" evidence=IEA
GO:0020037 "heme binding" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0006826 "iron ion transport" evidence=RCA
GO:0010054 "trichoblast differentiation" evidence=RCA
GO:0010106 "cellular response to iron ion starvation" evidence=RCA
GO:0010167 "response to nitrate" evidence=RCA
GO:0015706 "nitrate transport" evidence=RCA
TAIR|locus:2175951 AT5G17820 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2096419 AT3G03670 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2009318 AT1G34510 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2176402 RHS18 "root hair specific 18" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2119251 AT4G33420 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2165820 PER64 "peroxidase 64" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2164366 AT5G64120 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2012597 PER4 "peroxidase 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2166508 AT5G51890 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q93V93PER44_ARATH1, ., 1, 1, ., 1, ., 70.51430.93610.9935yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer1.11.1.70.914
3rd Layer1.11.10.921

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
gw1.XIII.2236.1
hypothetical protein (311 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query329
cd00693298 cd00693, secretory_peroxidase, Horseradish peroxid 1e-148
PLN03030324 PLN03030, PLN03030, cationic peroxidase; Provision 2e-76
pfam00141180 pfam00141, peroxidase, Peroxidase 7e-59
cd00314255 cd00314, plant_peroxidase_like, Heme-dependent per 2e-25
cd00692328 cd00692, ligninase, Ligninase and other manganese- 3e-13
cd00691253 cd00691, ascorbate_peroxidase, Ascorbate peroxidas 1e-11
PLN02879251 PLN02879, PLN02879, L-ascorbate peroxidase 1e-08
PLN02364250 PLN02364, PLN02364, L-ascorbate peroxidase 1 1e-08
PLN02608289 PLN02608, PLN02608, L-ascorbate peroxidase 2e-08
cd08201264 cd08201, plant_peroxidase_like_1, Uncharacterized 6e-07
>gnl|CDD|173827 cd00693, secretory_peroxidase, Horseradish peroxidase and related secretory plant peroxidases Back     alignment and domain information 
 Score =  417 bits (1075), Expect = e-148
 Identities = 148/302 (49%), Positives = 193/302 (63%), Gaps = 15/302 (4%)

Query: 21  KLTPNFYSSSCPEAESIIFNVVQRRFNTDRSITGALLRMHFHDCFSGNV--CDASILIDS 78
           +L+  FYS SCP AESI+ +VV+     D  +  ALLR+HFHDCF   V  CDAS+L+DS
Sbjct: 1   QLSVGFYSKSCPNAESIVRSVVRAAVKADPRLAAALLRLHFHDCF---VRGCDASVLLDS 57

Query: 79  TIRSQPEKDSGSNLTVRGYEIIDEIKNAVEQKCPSTVSCADIIALATRDAVALAGGLNYS 138
           T  +  EKD+  NL++RG+++ID+IK A+E  CP  VSCADI+ALA RDAV LAGG +Y 
Sbjct: 58  TANNTSEKDAPPNLSLRGFDVIDDIKAALEAACPGVVSCADILALAARDAVVLAGGPSYE 117

Query: 139 LPTGRLDGLRSNADEV-NLPGTSLSVPNVLQMFAEKGFNTTETVVILGAHTVGVVHCSFF 197
           +P GR DG  S+A++V NLP    SV  ++ +FA KG   T+ V + GAHT+G  HCS F
Sbjct: 118 VPLGRRDGRVSSANDVGNLPSPFFSVSQLISLFASKGLTVTDLVALSGAHTIGRAHCSSF 177

Query: 198 QDRL--------ADSDMDPAFAQELSKACEASSGSDDPMTNLDRGTPTSLDSQYYNQTLF 249
            DRL         D  +DPA+A +L K C  + G DD +  LD GTP + D+ YY   L 
Sbjct: 178 SDRLYNFSGTGDPDPTLDPAYAAQLRKKC-PAGGDDDTLVPLDPGTPNTFDNSYYKNLLA 236

Query: 250 KRGVLQIDQALALDASTHDIVAHFANDEDDFQLSFANVMVKLGSLQVLTDGQGEIRQNCR 309
            RG+L  DQAL  D  T  IV  +A ++D F   FA  MVK+G++ VLT  QGEIR+NCR
Sbjct: 237 GRGLLTSDQALLSDPRTRAIVNRYAANQDAFFRDFAAAMVKMGNIGVLTGSQGEIRKNCR 296

Query: 310 AF 311
             
Sbjct: 297 VV 298

Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. Length = 298
>gnl|CDD|215545 PLN03030, PLN03030, cationic peroxidase; Provisional Back     alignment and domain information
>gnl|CDD|215745 pfam00141, peroxidase, Peroxidase Back     alignment and domain information
>gnl|CDD|173823 cd00314, plant_peroxidase_like, Heme-dependent peroxidases similar to plant peroxidases Back     alignment and domain information
>gnl|CDD|173826 cd00692, ligninase, Ligninase and other manganese-dependent fungal peroxidases Back     alignment and domain information
>gnl|CDD|173825 cd00691, ascorbate_peroxidase, Ascorbate peroxidases and cytochrome C peroxidases Back     alignment and domain information
>gnl|CDD|178467 PLN02879, PLN02879, L-ascorbate peroxidase Back     alignment and domain information
>gnl|CDD|166005 PLN02364, PLN02364, L-ascorbate peroxidase 1 Back     alignment and domain information
>gnl|CDD|178218 PLN02608, PLN02608, L-ascorbate peroxidase Back     alignment and domain information
>gnl|CDD|173829 cd08201, plant_peroxidase_like_1, Uncharacterized family of plant peroxidase-like proteins Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 329
PLN03030324 cationic peroxidase; Provisional 100.0
cd00693298 secretory_peroxidase Horseradish peroxidase and re 100.0
PF00141230 peroxidase: Peroxidase; InterPro: IPR002016 Peroxi 100.0
PLN02608289 L-ascorbate peroxidase 100.0
cd00691253 ascorbate_peroxidase Ascorbate peroxidases and cyt 100.0
PLN02364250 L-ascorbate peroxidase 1 100.0
cd00692328 ligninase Ligninase and other manganese-dependent 100.0
PLN02879251 L-ascorbate peroxidase 100.0
cd00314255 plant_peroxidase_like Heme-dependent peroxidases s 100.0
cd00649409 catalase_peroxidase_1 N-terminal catalytic domain 100.0
TIGR00198 716 cat_per_HPI catalase/peroxidase HPI. Note that the 100.0
PRK15061 726 catalase/hydroperoxidase HPI(I); Provisional 100.0
cd08201264 plant_peroxidase_like_1 Uncharacterized family of 100.0
cd08200297 catalase_peroxidase_2 C-terminal non-catalytic dom 100.0
PRK15061726 catalase/hydroperoxidase HPI(I); Provisional 100.0
TIGR00198716 cat_per_HPI catalase/peroxidase HPI. Note that the 100.0
COG0376 730 KatG Catalase (peroxidase I) [Inorganic ion transp 99.97
COG0376730 KatG Catalase (peroxidase I) [Inorganic ion transp 99.51
>PLN03030 cationic peroxidase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=1.3e-104  Score=761.13  Aligned_cols=304  Identities=42%  Similarity=0.708  Sum_probs=283.2

Q ss_pred             hHHHHHHHHHhhhhhccCCCccccccCCccHHHHHHHHHHHHHhhCCCcHHHHHHHHhhcccCCCCCCcceeccCCCCCC
Q 040171            4 KCSFLLFFIFILPLALAKLTPNFYSSSCPEAESIIFNVVQRRFNTDRSITGALLRMHFHDCFSGNVCDASILIDSTIRSQ   83 (329)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~L~~~fY~~sCP~~e~iV~~~v~~~~~~~~~~a~~llRL~FHDcfv~~GcDgSill~~~~~~~   83 (329)
                      ++.++|++...++++.++|+++||++|||++|+||+++|++.+.+||+++|++|||+||||||+ ||||||||+++   .
T Consensus         7 ~~~~~~~~~~~~~~~~~~L~~~fY~~sCP~aE~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv~-GCDaSvLl~~~---~   82 (324)
T PLN03030          7 ILFFLLAMMATTLVQGQGTRVGFYSTTCPQAESIVRKTVQSHFQSNPAIAPGLLRMHFHDCFVR-GCDASILIDGS---N   82 (324)
T ss_pred             HHHHHHHHHhcccchhccCccchhhCcCCCHHHHHHHHHHHHHhhCcccchhhhhhhhhhheec-CCceEEeeCCC---c
Confidence            3444444445555566789999999999999999999999999999999999999999999999 99999999964   3


Q ss_pred             CCCCCCCCCCCchhHHHHHHHHHHhhhCCCCCCHHHHHHHhHHHHHHHhCCCCcccCCCCCCCCCCCCCCC-CCCCCCCC
Q 040171           84 PEKDSGSNLTVRGYEIIDEIKNAVEQKCPSTVSCADIIALATRDAVALAGGLNYSLPTGRLDGLRSNADEV-NLPGTSLS  162 (329)
Q Consensus        84 ~E~~~~~N~~L~g~~~Id~iK~~le~~cp~~VScADilalAar~av~~~GGP~~~v~~GR~D~~~s~~~~~-~LP~p~~~  162 (329)
                      .||++++|.+|+||++|+.||++||+.||++|||||||||||||||+++|||.|+|++||||+++|.+.++ +||.|+.+
T Consensus        83 ~Ek~a~~N~~l~Gf~~i~~iK~~~e~~CPg~VSCADilalAarDaV~~~gGP~~~v~~GRrDg~~s~~~~~~~LP~p~~~  162 (324)
T PLN03030         83 TEKTALPNLLLRGYDVIDDAKTQLEAACPGVVSCADILALAARDSVVLTNGLTWPVPTGRRDGRVSLASDASNLPGFTDS  162 (324)
T ss_pred             ccccCCCCcCcchHHHHHHHHHHHHhhCCCcccHHHHHHHHhhccccccCCCceeeeccccCCCCCCcccccCCcCCCCC
Confidence            69999999999999999999999999999999999999999999999999999999999999999887777 79999999


Q ss_pred             HHHHHHHHHHcCCCcccceeecccceeccccccccCCcC---------CCCCCCHHHHHHHHhhCCCCCCCCCCCCCCCC
Q 040171          163 VPNVLQMFAEKGFNTTETVVILGAHTVGVVHCSFFQDRL---------ADSDMDPAFAQELSKACEASSGSDDPMTNLDR  233 (329)
Q Consensus       163 ~~~l~~~F~~~Gls~~dlVaLsGaHTiG~~hc~~f~~Rl---------~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~lD~  233 (329)
                      +++|++.|+++||+.+|||+||||||||++||.+|.+||         +||+||+.|+++|++.||..+... ..+++|+
T Consensus       163 ~~~l~~~F~~~Gl~~~DlVaLsGAHTiG~ahC~~f~~Rlynf~~~~~~~Dp~~d~~~~~~L~~~Cp~~~~~~-~~~~lD~  241 (324)
T PLN03030        163 IDVQKQKFAAKGLNTQDLVTLVGGHTIGTTACQFFRYRLYNFTTTGNGADPSIDASFVPQLQALCPQNGDGS-RRIALDT  241 (324)
T ss_pred             HHHHHHHHHHcCCCHHHheeeeeccccceeeeeccccccccccCCCCCCCCchhHHHHHHHhccCCCCCCCC-ccccCCC
Confidence            999999999999999999999999999999999999998         389999999999999999643332 4678999


Q ss_pred             CCCcccChHHHHHhhhcccCccchhhhccCcchHHHHhhhccCh----hHHHHHHHHHHHHHhcCCCCCCCCcccccccc
Q 040171          234 GTPTSLDSQYYNQTLFKRGVLQIDQALALDASTHDIVAHFANDE----DDFQLSFANVMVKLGSLQVLTDGQGEIRQNCR  309 (329)
Q Consensus       234 ~tp~~FDN~Yy~~l~~~~gll~SD~~L~~d~~t~~~V~~yA~d~----~~F~~~Fa~Am~Km~~lgv~tg~~GeiR~~C~  309 (329)
                      .||.+|||+||++|+.++|+|+|||+|++|++|+++|++||.|+    +.|+++|++||+|||+|+|+||.+|||||+|+
T Consensus       242 ~Tp~~FDn~Yy~nll~~rGlL~SDq~L~~d~~T~~~V~~~A~~~~~~~~~F~~~Fa~AmvKMg~i~VlTG~~GEIRk~C~  321 (324)
T PLN03030        242 GSSNRFDASFFSNLKNGRGILESDQKLWTDASTRTFVQRFLGVRGLAGLNFNVEFGRSMVKMSNIGVKTGTNGEIRKVCS  321 (324)
T ss_pred             CCCcccccHHHHHHHhcCCCcCCchHhhcCccHHHHHHHHhcccccchhhhHHHHHHHHHHHccCCCCCCCCCceecccc
Confidence            99999999999999999999999999999999999999999885    59999999999999999999999999999999


Q ss_pred             ccc
Q 040171          310 AFN  312 (329)
Q Consensus       310 ~~n  312 (329)
                      .+|
T Consensus       322 ~vN  324 (324)
T PLN03030        322 AIN  324 (324)
T ss_pred             ccC
Confidence            998

>cd00693 secretory_peroxidase Horseradish peroxidase and related secretory plant peroxidases Back     alignment and domain information
>PF00141 peroxidase: Peroxidase; InterPro: IPR002016 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions Back     alignment and domain information
>PLN02608 L-ascorbate peroxidase Back     alignment and domain information
>cd00691 ascorbate_peroxidase Ascorbate peroxidases and cytochrome C peroxidases Back     alignment and domain information
>PLN02364 L-ascorbate peroxidase 1 Back     alignment and domain information
>cd00692 ligninase Ligninase and other manganese-dependent fungal peroxidases Back     alignment and domain information
>PLN02879 L-ascorbate peroxidase Back     alignment and domain information
>cd00314 plant_peroxidase_like Heme-dependent peroxidases similar to plant peroxidases Back     alignment and domain information
>cd00649 catalase_peroxidase_1 N-terminal catalytic domain of catalase-peroxidases Back     alignment and domain information
>TIGR00198 cat_per_HPI catalase/peroxidase HPI Back     alignment and domain information
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional Back     alignment and domain information
>cd08201 plant_peroxidase_like_1 Uncharacterized family of plant peroxidase-like proteins Back     alignment and domain information
>cd08200 catalase_peroxidase_2 C-terminal non-catalytic domain of catalase-peroxidases Back     alignment and domain information
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional Back     alignment and domain information
>TIGR00198 cat_per_HPI catalase/peroxidase HPI Back     alignment and domain information
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query329
3hdl_A304 Crystal Structure Of Highly Glycosylated Peroxidase 1e-57
1sch_A294 Peanut Peroxidase Length = 294 1e-55
1pa2_A306 Arabidopsis Thaliana Peroxidase A2 Length = 306 5e-53
1gwu_A309 Recombinant Horseradish Peroxidase C1a Ala140gly Le 3e-51
3atj_A309 Heme Ligand Mutant Of Recombinant Horseradish Perox 8e-51
2ylj_A306 Horse Radish Peroxidase, Mutant S167y Length = 306 9e-51
6atj_A308 Recombinant Horseradish Peroxidase C Complex With F 1e-50
2atj_A308 Recombinant Horseradish Peroxidase Complex With Ben 1e-50
1atj_A306 Recombinant Horseradish Peroxidase C1a Length = 306 2e-50
1w4w_A323 Ferric Horseradish Peroxidase C1a In Complex With F 2e-50
1gwo_A309 Recombinant Horseradish Peroxidase C1a Ala170gln Le 2e-50
1gw2_A308 Recombinant Horseradish Peroxidase C1a Thr171ser In 3e-50
1bgp_A309 Crystal Structure Of Barley Grain Peroxidase 1 Leng 8e-50
4atj_A309 Distal Heme Pocket Mutant (H42e) Of Recombinant Hor 1e-49
1gx2_A309 Recombinant Horseradish Peroxidase Phe209ser Comple 2e-49
4a5g_A308 Raphanus Sativus Anionic Peroxidase. Length = 308 2e-49
1kzm_A308 Distal Heme Pocket Mutant (r38s/h42e) Of Recombinan 7e-49
1fhf_A304 The Structure Of Soybean Peroxidase Length = 304 4e-47
1qgj_A300 Arabidopsis Thaliana Peroxidase N Length = 300 7e-43
3riw_A271 The Crystal Structure Of Leishmania Major Peroxidas 4e-12
4ged_A268 Crystal Structure Of The Leishmania Major Peroxidas 5e-12
3riv_A271 The Crystal Structure Of Leishmania Major Peroxidas 5e-12
1apx_A249 Crystal Structure Of Recombinant Ascorbate Peroxida 3e-09
4g05_A317 The Crystal Structures Of Several Mutants Of Pleuro 2e-06
4fdq_A315 The Crystal Structures Of Several Mutants Of Pleuro 3e-06
4fcn_A319 The Crystal Structures Of Several Mutants Of Pleuro 3e-06
2cl4_X261 Ascorbate Peroxidase R172a Mutant Length = 261 3e-06
1oaf_A261 Ascobate Peroxidase From Soybean Cytosol In Complex 5e-06
2vka_A317 Site-directed Mutagenesis Of The Catalytic Tryptoph 5e-06
2xif_A249 The Structure Of Ascorbate Peroxidase Compound Ii L 6e-06
2vcf_X264 Structure Of Isoniazid (Inh) Bound To Cytosolic Soy 6e-06
2y6b_A249 Ascorbate Peroxidase R38k Mutant Length = 249 1e-05
3fm6_A331 Crystal Structure Analysis Of Fungal Versatile Pero 2e-05
3fm4_A331 Crystal Structure Analysis Of Fungal Versatile Pero 2e-05
2ggn_X261 Conformational Mobility In The Active Site Of A Hem 2e-05
3zcg_A261 Ascorbate Peroxidase W41a-h42c Mutant Length = 261 2e-05
3zch_A261 Ascorbate Peroxidase W41a-h42m Mutant Length = 261 3e-05
2vcs_A261 Structure Of Isoniazid (Inh) Bound To Cytosolic Soy 3e-05
2boq_A331 Crystal Structure Of Versatile Peroxidase Length = 3e-05
3fkg_A331 Crystal Structure Analysis Of Fungal Versatile Pero 3e-05
1iyn_A295 Crystal Structure Of Chloroplastic Ascorbate Peroxi 3e-05
4fcs_A315 The Crystal Structures Of Several Mutants Of Pleuro 3e-05
3fm1_A331 Crystal Structure Analysis Of Fungal Versatile Pero 3e-05
2w23_A316 Structure Of Mutant W169y Of Pleurotus Eryngii Vers 3e-05
3zcy_A249 Ascorbate Peroxidase W41a-h42y Mutant Length = 249 3e-05
3fjw_A331 Crystal Structure Analysis Of Fungal Versatile Pero 3e-05
4fef_A315 The Crystal Structures Of Several Mutants Of Pleuro 3e-05
2y6a_A249 Ascorbate Peroxidase R38a Mutant Length = 249 4e-05
3fmu_A331 Crystal Structure Analysis Of Fungal Versatile Pero 4e-05
1jci_A294 Stabilization Of The Engineered Cation-Binding Loop 2e-04
1sog_A294 Cyrstal Structure Of Cytochrome C Peroxidase Mutant 3e-04
>pdb|3HDL|A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree Length = 304 Back     alignment and structure 
Iteration: 1

 Score =  220 bits (560), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 126/299 (42%), Positives = 171/299 (57%), Gaps = 13/299 (4%)
Query: 26  FYSSSCPEAESIIFNVVQRRFNTDRSITGALLRMHFHDCFSGNVCDASILIDSTIRSQPE 85
           FY++SCP AES++   V   F  +  I   L+RMHFHDCF    CDAS+L+DST  +  E
Sbjct: 6   FYNTSCPTAESLVQQAVAAAFANNSGIAPGLIRMHFHDCFVRG-CDASVLLDSTANNTAE 64
Query: 86  KDS-GSNLTVRGYEIIDEIKNAVEQKCPSTVSCADIIALATRDAVALAGGLNYSLPTGRL 144
           KD+  +N ++RG+E+I   K+AVE  CP TVSCADI+A A RD+  LAG + Y +P+GR 
Sbjct: 65  KDAIPNNPSLRGFEVITAAKSAVEAACPQTVSCADILAFAARDSANLAGNITYQVPSGRR 124
Query: 145 DGLRSNADEVN--LPGTSLSVPNVLQMFAEKGFNTTETVVILGAHTVGVVHCSFFQDRL- 201
           DG  S A E N  +P    +   ++  FA K     E V + GAH++GV HCS F +RL 
Sbjct: 125 DGTVSLASEANAQIPSPLFNATQLINSFANKTLTADEMVTLSGAHSIGVAHCSSFTNRLY 184
Query: 202 -------ADSDMDPAFAQELSKACEASSGSDDPMT-NLDRGTPTSLDSQYYNQTLFKRGV 253
                   D  + P++A  L   C A+S    P+T +LD  TP+ LD+ YY       G+
Sbjct: 185 NFNSGSGIDPTLSPSYAALLRNTCPANSTRFTPITVSLDIITPSVLDNMYYTGVQLTLGL 244
Query: 254 LQIDQALALDASTHDIVAHFANDEDDFQLSFANVMVKLGSLQVLTDGQGEIRQNCRAFN 312
           L  DQAL  +A+    V   A +   +   FA  MVK+G ++VLT  QGEIR NC   N
Sbjct: 245 LTSDQALVTEANLSAAVKANAMNLTAWASKFAQAMVKMGQIEVLTGTQGEIRTNCSVVN 303
>pdb|1SCH|A Chain A, Peanut Peroxidase Length = 294 Back     alignment and structure
>pdb|1PA2|A Chain A, Arabidopsis Thaliana Peroxidase A2 Length = 306 Back     alignment and structure
>pdb|1GWU|A Chain A, Recombinant Horseradish Peroxidase C1a Ala140gly Length = 309 Back     alignment and structure
>pdb|3ATJ|A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|2YLJ|A Chain A, Horse Radish Peroxidase, Mutant S167y Length = 306 Back     alignment and structure
>pdb|6ATJ|A Chain A, Recombinant Horseradish Peroxidase C Complex With Ferulic Acid Length = 308 Back     alignment and structure
>pdb|2ATJ|A Chain A, Recombinant Horseradish Peroxidase Complex With Benzhydroxamic Acid Length = 308 Back     alignment and structure
>pdb|1ATJ|A Chain A, Recombinant Horseradish Peroxidase C1a Length = 306 Back     alignment and structure
>pdb|1W4W|A Chain A, Ferric Horseradish Peroxidase C1a In Complex With Formate Length = 323 Back     alignment and structure
>pdb|1GWO|A Chain A, Recombinant Horseradish Peroxidase C1a Ala170gln Length = 309 Back     alignment and structure
>pdb|1GW2|A Chain A, Recombinant Horseradish Peroxidase C1a Thr171ser In Complex With Ferulic Acid Length = 308 Back     alignment and structure
>pdb|1BGP|A Chain A, Crystal Structure Of Barley Grain Peroxidase 1 Length = 309 Back     alignment and structure
>pdb|4ATJ|A Chain A, Distal Heme Pocket Mutant (H42e) Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|1GX2|A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With Benzhydroxamic Acid Length = 309 Back     alignment and structure
>pdb|4A5G|A Chain A, Raphanus Sativus Anionic Peroxidase. Length = 308 Back     alignment and structure
>pdb|1KZM|A Chain A, Distal Heme Pocket Mutant (r38s/h42e) Of Recombinant Horseradish Peroxidase C (hrp C) Length = 308 Back     alignment and structure
>pdb|1FHF|A Chain A, The Structure Of Soybean Peroxidase Length = 304 Back     alignment and structure
>pdb|1QGJ|A Chain A, Arabidopsis Thaliana Peroxidase N Length = 300 Back     alignment and structure
>pdb|3RIW|A Chain A, The Crystal Structure Of Leishmania Major Peroxidase Mutant C197t Length = 271 Back     alignment and structure
>pdb|4GED|A Chain A, Crystal Structure Of The Leishmania Major Peroxidase-Cytochrome C Complex Length = 268 Back     alignment and structure
>pdb|3RIV|A Chain A, The Crystal Structure Of Leishmania Major Peroxidase Length = 271 Back     alignment and structure
>pdb|1APX|A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase Length = 249 Back     alignment and structure
>pdb|4G05|A Chain A, The Crystal Structures Of Several Mutants Of Pleurotus Eryngii Versatile Peroxidase Length = 317 Back     alignment and structure
>pdb|4FDQ|A Chain A, The Crystal Structures Of Several Mutants Of Pleurotus Eryngii Versatile Peroxidase Length = 315 Back     alignment and structure
>pdb|4FCN|A Chain A, The Crystal Structures Of Several Mutants Of Pleurotus Eryngii Versatile Peroxidase Length = 319 Back     alignment and structure
>pdb|2CL4|X Chain X, Ascorbate Peroxidase R172a Mutant Length = 261 Back     alignment and structure
>pdb|1OAF|A Chain A, Ascobate Peroxidase From Soybean Cytosol In Complex With Ascorbate Length = 261 Back     alignment and structure
>pdb|2VKA|A Chain A, Site-directed Mutagenesis Of The Catalytic Tryptophan Environment In Pleurotus Eryngii Versatile Peroxidase Length = 317 Back     alignment and structure
>pdb|2XIF|A Chain A, The Structure Of Ascorbate Peroxidase Compound Ii Length = 249 Back     alignment and structure
>pdb|2VCF|X Chain X, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean Ascorbate Peroxidase Length = 264 Back     alignment and structure
>pdb|2Y6B|A Chain A, Ascorbate Peroxidase R38k Mutant Length = 249 Back     alignment and structure
>pdb|3FM6|A Chain A, Crystal Structure Analysis Of Fungal Versatile Peroxidase From Pleurotus Eryngii Length = 331 Back     alignment and structure
>pdb|3FM4|A Chain A, Crystal Structure Analysis Of Fungal Versatile Peroxidase From Pleurotus Eryngii Length = 331 Back     alignment and structure
>pdb|2GGN|X Chain X, Conformational Mobility In The Active Site Of A Heme Peroxidase Length = 261 Back     alignment and structure
>pdb|3ZCG|A Chain A, Ascorbate Peroxidase W41a-h42c Mutant Length = 261 Back     alignment and structure
>pdb|3ZCH|A Chain A, Ascorbate Peroxidase W41a-h42m Mutant Length = 261 Back     alignment and structure
>pdb|2VCS|A Chain A, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean Ascorbate Peroxidase Mutant H42a Length = 261 Back     alignment and structure
>pdb|2BOQ|A Chain A, Crystal Structure Of Versatile Peroxidase Length = 331 Back     alignment and structure
>pdb|3FKG|A Chain A, Crystal Structure Analysis Of Fungal Versatile Peroxidase From Pleurotus Eryngii Length = 331 Back     alignment and structure
>pdb|1IYN|A Chain A, Crystal Structure Of Chloroplastic Ascorbate Peroxidase From Tobacco Plants And Structural Insights For Its Instability Length = 295 Back     alignment and structure
>pdb|4FCS|A Chain A, The Crystal Structures Of Several Mutants Of Pleurotus Eryngii Versatile Peroxidase Length = 315 Back     alignment and structure
>pdb|3FM1|A Chain A, Crystal Structure Analysis Of Fungal Versatile Peroxidase From Pleurotus Eryngii Length = 331 Back     alignment and structure
>pdb|2W23|A Chain A, Structure Of Mutant W169y Of Pleurotus Eryngii Versatile Peroxidase (Vp) Length = 316 Back     alignment and structure
>pdb|3ZCY|A Chain A, Ascorbate Peroxidase W41a-h42y Mutant Length = 249 Back     alignment and structure
>pdb|3FJW|A Chain A, Crystal Structure Analysis Of Fungal Versatile Peroxidase From Pleurotus Eryngii Length = 331 Back     alignment and structure
>pdb|4FEF|A Chain A, The Crystal Structures Of Several Mutants Of Pleurotus Eryngii Versatile Peroxidase Length = 315 Back     alignment and structure
>pdb|2Y6A|A Chain A, Ascorbate Peroxidase R38a Mutant Length = 249 Back     alignment and structure
>pdb|3FMU|A Chain A, Crystal Structure Analysis Of Fungal Versatile Peroxidase From Pleurotus Eryngii Length = 331 Back     alignment and structure
>pdb|1JCI|A Chain A, Stabilization Of The Engineered Cation-Binding Loop In Cytochrome C Peroxidase (Ccp) Length = 294 Back     alignment and structure
>pdb|1SOG|A Chain A, Cyrstal Structure Of Cytochrome C Peroxidase Mutant: Ccpk2m2 Length = 294 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query329
3hdl_A304 Royal PALM TREE peroxidase; glycosylated, oxidored 1e-138
1sch_A294 PNP, peanut peroxidase, major cationic isozyme; ca 1e-138
1fhf_A304 SEED coat peroxidase; oxidoreductase; HET: HEM; 2. 1e-135
1bgp_A309 Barley grain peroxidase; chromoprotein, oxidoreduc 1e-135
1pa2_A306 Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45 1e-134
1gwu_A309 Peroxidase C1A; oxidoreductase, glycoprotein, heme 1e-133
1qgj_A300 Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A 1e-129
1iyn_A295 Chloroplastic ascorbate peroxidase; hydrogen perox 2e-65
2vcn_A261 Ascorbate peroxidase; INH, APX, isoniazid, oxidore 2e-64
3fmu_A331 VersatIle peroxidase VPL2; class II (fungal) perox 3e-56
3m5q_A357 Manganese peroxidase 1; heme, Mn(II)-binding site, 5e-54
2e39_A344 Peroxidase; heme protein, coordination geometry of 8e-53
3q3u_A338 Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A 7e-49
1llp_A343 LIP4.15, lignin peroxidase; heme protein, glyco pr 2e-48
3riv_A271 Ascorbate peroxidase; alpha helical bundle, heme p 3e-22
3e2o_A294 CCP, cytochrome C peroxidase; cytochrome C peroxid 6e-18
3rrw_A268 Thylakoid lumenal 29 kDa protein, chloroplastic; c 3e-07
>3hdl_A Royal PALM TREE peroxidase; glycosylated, oxidoreductase; HET: HEM MES NAG FUC MAN; 1.85A {Roystonea regia} Length = 304 Back     alignment and structure
 Score =  393 bits (1012), Expect = e-138
 Identities = 127/305 (41%), Positives = 171/305 (56%), Gaps = 17/305 (5%)

Query: 22  LTPNFYSSSCPEAESIIFNVVQRRFNTDRSITGALLRMHFHDCFSGNV--CDASILIDST 79
           L   FY++SCP AES++   V   F  +  I   L+RMHFHDCF   V  CDAS+L+DST
Sbjct: 2   LQIGFYNTSCPTAESLVQQAVAAAFANNSGIAPGLIRMHFHDCF---VRGCDASVLLDST 58

Query: 80  IRSQPEKDSGSN-LTVRGYEIIDEIKNAVEQKCPSTVSCADIIALATRDAVALAGGLNYS 138
             +  EKD+  N  ++RG+E+I   K+AVE  CP TVSCADI+A A RD+  LAG + Y 
Sbjct: 59  ANNTAEKDAIPNNPSLRGFEVITAAKSAVEAACPQTVSCADILAFAARDSANLAGNITYQ 118

Query: 139 LPTGRLDGLRSNADEV--NLPGTSLSVPNVLQMFAEKGFNTTETVVILGAHTVGVVHCSF 196
           +P+GR DG  S A E    +P    +   ++  FA K     E V + GAH++GV HCS 
Sbjct: 119 VPSGRRDGTVSLASEANAQIPSPLFNATQLINSFANKTLTADEMVTLSGAHSIGVAHCSS 178

Query: 197 FQDRL--------ADSDMDPAFAQELSKACEASSGSDDPMT-NLDRGTPTSLDSQYYNQT 247
           F +RL         D  + P++A  L   C A+S    P+T +LD  TP+ LD+ YY   
Sbjct: 179 FTNRLYNFNSGSGIDPTLSPSYAALLRNTCPANSTRFTPITVSLDIITPSVLDNMYYTGV 238

Query: 248 LFKRGVLQIDQALALDASTHDIVAHFANDEDDFQLSFANVMVKLGSLQVLTDGQGEIRQN 307
               G+L  DQAL  +A+    V   A +   +   FA  MVK+G ++VLT  QGEIR N
Sbjct: 239 QLTLGLLTSDQALVTEANLSAAVKANAMNLTAWASKFAQAMVKMGQIEVLTGTQGEIRTN 298

Query: 308 CRAFN 312
           C   N
Sbjct: 299 CSVVN 303
>1sch_A PNP, peanut peroxidase, major cationic isozyme; calcium binding, glycosylation, oxidoreductase; HET: NAG HEM; 2.56A {Arachis hypogaea} SCOP: a.93.1.1 Length = 294 Back     alignment and structure
>1fhf_A SEED coat peroxidase; oxidoreductase; HET: HEM; 2.80A {Glycine max} SCOP: a.93.1.1 Length = 304 Back     alignment and structure
>1bgp_A Barley grain peroxidase; chromoprotein, oxidoreductase; HET: HEM; 1.90A {Hordeum vulgare} SCOP: a.93.1.1 Length = 309 Back     alignment and structure
>1pa2_A Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45A {Arabidopsis thaliana} SCOP: a.93.1.1 PDB: 1qo4_A* Length = 306 Back     alignment and structure
>1gwu_A Peroxidase C1A; oxidoreductase, glycoprotein, heme, multigene family, signal,; HET: HEM; 1.31A {Armoracia rusticana} SCOP: a.93.1.1 PDB: 1w4w_A* 1w4y_A* 1gwo_A* 2atj_A* 1gwt_A* 3atj_A* 1gx2_A* 7atj_A* 1h55_A* 1h58_A* 1h5a_A* 1h5c_A* 1h5d_A* 1h5e_A* 1h5f_A* 1h57_A* 1h5h_A* 1h5i_A* 1h5j_A* 1h5k_A* ... Length = 309 Back     alignment and structure
>1qgj_A Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A {Arabidopsis thaliana} SCOP: a.93.1.1 Length = 300 Back     alignment and structure
>1iyn_A Chloroplastic ascorbate peroxidase; hydrogen peroxide, tobacco plant, stromal ascorbate peroxidase, oxidoreductase; HET: HEM; 1.60A {Nicotiana tabacum} SCOP: a.93.1.1 Length = 295 Back     alignment and structure
>2vcn_A Ascorbate peroxidase; INH, APX, isoniazid, oxidoreductase; HET: HEM ISZ; 1.20A {Glycine max} PDB: 2ggn_X* 2ghd_X* 2ghe_X* 2ghc_X* 2vnx_X* 2vnz_X* 2vo2_X* 2wd4_A* 1oaf_A* 1oag_A* 1v0h_X* 2ghh_X* 2ghk_X* 2vcf_X* 2cl4_X* 2vcs_A* 2xi6_A* 2xif_A* 2xih_A* 2xj6_A* ... Length = 261 Back     alignment and structure
>3fmu_A VersatIle peroxidase VPL2; class II (fungal) peroxidases, protoporphyrin IX, electron T lignin peroxidase, lignin degradation; HET: HEM; 1.04A {Pleurotus eryngii} PDB: 3fjw_A* 2boq_A* 3fm1_A* 3fm4_A* 3fm6_A* 3fkg_A* 2w23_A* 2vka_A* Length = 331 Back     alignment and structure
>3m5q_A Manganese peroxidase 1; heme, Mn(II)-binding site, Ca(II)-binding site, glycosylation, ultrahigh resolution, calcium; HET: NAG MAN HEM; 0.93A {Phanerochaete chrysosporium} PDB: 1mnp_A* 1yyg_A* 1yzp_A* 1yzr_A* 1yyd_A* 3m8m_A* 1mn1_A* 1mn2_A* Length = 357 Back     alignment and structure
>2e39_A Peroxidase; heme protein, coordination geometry of heme iron, ARP, perox oxidoreductase; HET: NAG MAN HEM; 1.30A {'arthromyces ramosus'} SCOP: a.93.1.1 PDB: 1arp_A* 1arv_A* 1arw_A* 1arx_A* 1ary_A* 1c8i_A* 1ck6_A* 1gza_A* 1gzb_A* 1hsr_A* 1aru_A* 2e3a_A* 2e3b_A* 1lyk_A* 1lyc_A* 1ly9_A* 1h3j_A* 1ly8_A* Length = 344 Back     alignment and structure
>3q3u_A Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A {Trametes cervina} Length = 338 Back     alignment and structure
>1llp_A LIP4.15, lignin peroxidase; heme protein, glyco protein,, oxidoreductase; HET: NAG MAN A2G HEM; 1.70A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1lga_A* 1b80_A* 1b82_A* 1b85_A* 1qpa_A* Length = 343 Back     alignment and structure
>3riv_A Ascorbate peroxidase; alpha helical bundle, heme peroxidase, oxidoreductase; HET: HEM; 1.76A {Leishmania major} PDB: 3riw_A* Length = 271 Back     alignment and structure
>3e2o_A CCP, cytochrome C peroxidase; cytochrome C peroxidase (CCP), heme, hydrogen peroxide, iron, metal-binding, mitochondrion; HET: HEM; 1.06A {Saccharomyces cerevisiae} PDB: 1z53_A* 1kok_A* 1sbm_A* 1sdq_A* 1s73_A* 1zby_A* 1zbz_A* 2b0z_A* 2b10_A* 2b11_A* 2b12_A* 2cyp_A* 2ycg_A* 2v23_A* 1ebe_A* 3r98_A* 3r99_A* 1mkr_A* 1mk8_A* 1mkq_A* ... Length = 294 Back     alignment and structure
>3rrw_A Thylakoid lumenal 29 kDa protein, chloroplastic; chloroplast thylakoid lumen, plant protein; 2.50A {Arabidopsis thaliana} Length = 268 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query329
3hdl_A304 Royal PALM TREE peroxidase; glycosylated, oxidored 100.0
1sch_A294 PNP, peanut peroxidase, major cationic isozyme; ca 100.0
1pa2_A306 Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45 100.0
1fhf_A304 SEED coat peroxidase; oxidoreductase; HET: HEM; 2. 100.0
1gwu_A309 Peroxidase C1A; oxidoreductase, glycoprotein, heme 100.0
1bgp_A309 Barley grain peroxidase; chromoprotein, oxidoreduc 100.0
1qgj_A300 Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A 100.0
1iyn_A295 Chloroplastic ascorbate peroxidase; hydrogen perox 100.0
1llp_A343 LIP4.15, lignin peroxidase; heme protein, glyco pr 100.0
2e39_A344 Peroxidase; heme protein, coordination geometry of 100.0
2cca_A 740 Peroxidase/catalase T; oxidoreductase, catalase-pe 100.0
3m5q_A357 Manganese peroxidase 1; heme, Mn(II)-binding site, 100.0
3fmu_A331 VersatIle peroxidase VPL2; class II (fungal) perox 100.0
2vcn_A261 Ascorbate peroxidase; INH, APX, isoniazid, oxidore 100.0
1ub2_A 720 Catalase-peroxidase; KATG, cyanobacteria, oxidored 100.0
1itk_A 731 Catalase-peroxidase; heme protein, oxidoreductase; 100.0
3q3u_A338 Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A 100.0
3riv_A271 Ascorbate peroxidase; alpha helical bundle, heme p 100.0
3e2o_A294 CCP, cytochrome C peroxidase; cytochrome C peroxid 100.0
3ut2_A 764 Catalase-peroxidase 2; KATG, fungal, heme enzyme, 100.0
3n3r_A 748 Catalase-peroxidase; E198A variant, tuberclosis, i 100.0
3vli_A 737 Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1 100.0
1u2k_A309 Peroxidase/catalase HPI; KATG, catalase-peroxidase 100.0
2cca_A740 Peroxidase/catalase T; oxidoreductase, catalase-pe 100.0
1itk_A731 Catalase-peroxidase; heme protein, oxidoreductase; 100.0
3rrw_A268 Thylakoid lumenal 29 kDa protein, chloroplastic; c 100.0
1ub2_A720 Catalase-peroxidase; KATG, cyanobacteria, oxidored 100.0
3vli_A737 Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1 100.0
3n3r_A748 Catalase-peroxidase; E198A variant, tuberclosis, i 100.0
3ut2_A764 Catalase-peroxidase 2; KATG, fungal, heme enzyme, 100.0
>3hdl_A Royal PALM TREE peroxidase; glycosylated, oxidoreductase; HET: HEM MES NAG FUC MAN; 1.85A {Roystonea regia} SCOP: a.93.1.0 Back     alignment and structure
Probab=100.00  E-value=1.4e-105  Score=764.39  Aligned_cols=289  Identities=43%  Similarity=0.729  Sum_probs=279.8

Q ss_pred             CCccccccCCccHHHHHHHHHHHHHhhCCCcHHHHHHHHhhcccCCCCCCcceeccCCCCCCCCCCCCCCC-CCchhHHH
Q 040171           22 LTPNFYSSSCPEAESIIFNVVQRRFNTDRSITGALLRMHFHDCFSGNVCDASILIDSTIRSQPEKDSGSNL-TVRGYEII  100 (329)
Q Consensus        22 L~~~fY~~sCP~~e~iV~~~v~~~~~~~~~~a~~llRL~FHDcfv~~GcDgSill~~~~~~~~E~~~~~N~-~L~g~~~I  100 (329)
                      |+++||++|||++|+||+++|++++.+||+++|+|||||||||||+ ||||||||++++++.+|+++++|. +|+||++|
T Consensus         2 L~~~fY~~sCP~~e~iVr~~v~~~~~~d~~~aa~llRL~FHDCfv~-GCDgSiLld~t~~~~~Ek~~~~N~~~lrgf~vi   80 (304)
T 3hdl_A            2 LQIGFYNTSCPTAESLVQQAVAAAFANNSGIAPGLIRMHFHDCFVR-GCDASVLLDSTANNTAEKDAIPNNPSLRGFEVI   80 (304)
T ss_dssp             CEETTTTTTCTTHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHTTT-SSSSGGGCCCBTTBCCGGGSTTTTTTCCCHHHH
T ss_pred             CccChhhCcCcCHHHHHHHHHHHHHHhCCcchHHHHHHheecccCC-CCCeeeeecCCCCCcccccCCCcccchHHHHHH
Confidence            7899999999999999999999999999999999999999999999 999999999998888999999999 89999999


Q ss_pred             HHHHHHHhhhCCCCCCHHHHHHHhHHHHHHHhCCCCcccCCCCCCCCCCCCCCC--CCCCCCCCHHHHHHHHHHcCCCcc
Q 040171          101 DEIKNAVEQKCPSTVSCADIIALATRDAVALAGGLNYSLPTGRLDGLRSNADEV--NLPGTSLSVPNVLQMFAEKGFNTT  178 (329)
Q Consensus       101 d~iK~~le~~cp~~VScADilalAar~av~~~GGP~~~v~~GR~D~~~s~~~~~--~LP~p~~~~~~l~~~F~~~Gls~~  178 (329)
                      |.||++||+.||++||||||||||||+||+++|||.|+|++||+|++++....+  +||+|+.++++|++.|++|||+++
T Consensus        81 d~iK~~le~~Cp~~VScADilalAardav~~~GGP~~~v~~GRrD~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~  160 (304)
T 3hdl_A           81 TAAKSAVEAACPQTVSCADILAFAARDSANLAGNITYQVPSGRRDGTVSLASEANAQIPSPLFNATQLINSFANKTLTAD  160 (304)
T ss_dssp             HHHHHHHHHHSTTTSCHHHHHHHHHHHHHHHHHCCCCCCEECCCBCSCCCHHHHHHHSCCTTCCHHHHHHHHHTTTCCHH
T ss_pred             HHHHHHHHhhCCCCccHHHHHHHHHhhhhhccCCCccccccCccCCCCCCccccccCCCCCCCCHHHHHHHHHHcCCCHH
Confidence            999999999999999999999999999999999999999999999999988765  799999999999999999999999


Q ss_pred             cceeecccceeccccccccCCcC--------CCCCCCHHHHHHHHhhCCCCCC--CCCCCCCCCCCCCcccChHHHHHhh
Q 040171          179 ETVVILGAHTVGVVHCSFFQDRL--------ADSDMDPAFAQELSKACEASSG--SDDPMTNLDRGTPTSLDSQYYNQTL  248 (329)
Q Consensus       179 dlVaLsGaHTiG~~hc~~f~~Rl--------~dp~~d~~~~~~L~~~Cp~~~~--~~~~~~~lD~~tp~~FDN~Yy~~l~  248 (329)
                      ||||||||||||++||.+|.+||        +||+||+.|++.|++.||..++  +. +.++||+.||.+|||+||++|+
T Consensus       161 d~VaLsGaHTiG~ahC~~f~~Rly~f~~~~~~DP~ld~~~a~~L~~~Cp~~~~~~~~-~~~~lD~~TP~~FDN~Yy~nL~  239 (304)
T 3hdl_A          161 EMVTLSGAHSIGVAHCSSFTNRLYNFNSGSGIDPTLSPSYAALLRNTCPANSTRFTP-ITVSLDIITPSVLDNMYYTGVQ  239 (304)
T ss_dssp             HHHHHGGGGGSSEEEGGGTGGGTSSCSSSSSSCTTSCHHHHHHHHHHSCTTCCTTSC-CEEESCSSSTTSCSTHHHHHHH
T ss_pred             HhhhhhccccccccccchhhhhhcccCCCCCCCCcccHHHHHHHhccCCCCCCCCCc-cccCCCCCCcccccHHHHHHHH
Confidence            99999999999999999999999        4999999999999999997654  33 5678999999999999999999


Q ss_pred             hcccCccchhhhccCcchHHHHhhhccChhHHHHHHHHHHHHHhcCCCCCCCCccccccccccc
Q 040171          249 FKRGVLQIDQALALDASTHDIVAHFANDEDDFQLSFANVMVKLGSLQVLTDGQGEIRQNCRAFN  312 (329)
Q Consensus       249 ~~~gll~SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv~tg~~GeiR~~C~~~n  312 (329)
                      .++|||+|||+|+.|++|+++|++||.||+.|+++|++||+||++|+|+||.+||||++|+.+|
T Consensus       240 ~~~glL~SDq~L~~d~~t~~~V~~yA~~~~~F~~~Fa~AmvKmg~igv~tg~~GeIR~~C~~~N  303 (304)
T 3hdl_A          240 LTLGLLTSDQALVTEANLSAAVKANAMNLTAWASKFAQAMVKMGQIEVLTGTQGEIRTNCSVVN  303 (304)
T ss_dssp             TTCCCSHHHHGGGSSHHHHHHHHHHHHCHHHHHHHHHHHHHHHTTTTCCCTTSSBCCSBTTBCC
T ss_pred             hCcCCCCCCHHHhcCccHHHHHHHhccCHHHHHHHHHHHHHHHHhcCCCCCCCCeeeCCccccC
Confidence            9999999999999999999999999999999999999999999999999999999999999999
>1sch_A PNP, peanut peroxidase, major cationic isozyme; calcium binding, glycosylation, oxidoreductase; HET: NAG HEM; 2.56A {Arachis hypogaea} SCOP: a.93.1.1 Back     alignment and structure
>1pa2_A Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45A {Arabidopsis thaliana} SCOP: a.93.1.1 PDB: 1qo4_A* Back     alignment and structure
>1fhf_A SEED coat peroxidase; oxidoreductase; HET: HEM; 2.80A {Glycine max} SCOP: a.93.1.1 Back     alignment and structure
>1gwu_A Peroxidase C1A; oxidoreductase, glycoprotein, heme, multigene family, signal,; HET: HEM; 1.31A {Armoracia rusticana} SCOP: a.93.1.1 PDB: 1w4w_A* 1w4y_A* 1gwo_A* 2atj_A* 1gwt_A* 3atj_A* 1gx2_A* 7atj_A* 1h55_A* 1h58_A* 1h5a_A* 1h5c_A* 1h5d_A* 1h5e_A* 1h5f_A* 1h57_A* 1h5h_A* 1h5i_A* 1h5j_A* 1h5k_A* ... Back     alignment and structure
>1bgp_A Barley grain peroxidase; chromoprotein, oxidoreductase; HET: HEM; 1.90A {Hordeum vulgare} SCOP: a.93.1.1 Back     alignment and structure
>1qgj_A Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A {Arabidopsis thaliana} SCOP: a.93.1.1 Back     alignment and structure
>1iyn_A Chloroplastic ascorbate peroxidase; hydrogen peroxide, tobacco plant, stromal ascorbate peroxidase, oxidoreductase; HET: HEM; 1.60A {Nicotiana tabacum} SCOP: a.93.1.1 Back     alignment and structure
>1llp_A LIP4.15, lignin peroxidase; heme protein, glyco protein,, oxidoreductase; HET: NAG MAN A2G HEM; 1.70A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1lga_A* 1b80_A* 1b82_A* 1b85_A* 1qpa_A* Back     alignment and structure
>2e39_A Peroxidase; heme protein, coordination geometry of heme iron, ARP, perox oxidoreductase; HET: NAG MAN HEM; 1.30A {'arthromyces ramosus'} SCOP: a.93.1.1 PDB: 1arp_A* 1arv_A* 1arw_A* 1arx_A* 1ary_A* 1c8i_A* 1ck6_A* 1gza_A* 1gzb_A* 1hsr_A* 1aru_A* 2e3a_A* 2e3b_A* 1lyk_A* 1lyc_A* 1ly9_A* 1h3j_A* 1ly8_A* Back     alignment and structure
>2cca_A Peroxidase/catalase T; oxidoreductase, catalase-peroxidase, KATG, heme, hydrogen peroxide, iron, metal-binding, organic radical; HET: HEM; 2.0A {Mycobacterium tuberculosis} SCOP: a.93.1.3 a.93.1.3 PDB: 1sj2_A* 2ccd_A* Back     alignment and structure
>3m5q_A Manganese peroxidase 1; heme, Mn(II)-binding site, Ca(II)-binding site, glycosylation, ultrahigh resolution, calcium; HET: NAG MAN HEM; 0.93A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1mnp_A* 1yyg_A* 1yzp_A* 1yzr_A* 1yyd_A* 3m8m_A* 1mn1_A* 1mn2_A* Back     alignment and structure
>3fmu_A VersatIle peroxidase VPL2; class II (fungal) peroxidases, protoporphyrin IX, electron T lignin peroxidase, lignin degradation; HET: HEM; 1.04A {Pleurotus eryngii} PDB: 3fjw_A* 2boq_A* 3fm1_A* 3fm4_A* 3fm6_A* 3fkg_A* 2w23_A* 2vka_A* 4fcn_A* 4g05_A* 4fcs_A* 4fef_A* 4fdq_A* Back     alignment and structure
>2vcn_A Ascorbate peroxidase; INH, APX, isoniazid, oxidoreductase; HET: HEM ISZ; 1.20A {Glycine max} PDB: 2ggn_X* 2ghd_X* 2ghe_X* 2ghc_X* 2vnx_X* 2vnz_X* 2vo2_X* 2wd4_A* 1oaf_A* 1oag_A* 1v0h_X* 2ghh_X* 2ghk_X* 2vcf_X* 2cl4_X* 2vcs_A* 2xi6_A* 2xif_A* 2xih_A* 2xj6_A* ... Back     alignment and structure
>1ub2_A Catalase-peroxidase; KATG, cyanobacteria, oxidoreductase; HET: HEM; 2.40A {Synechococcus elongatus} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>1itk_A Catalase-peroxidase; heme protein, oxidoreductase; HET: HEM; 2.00A {Haloarcula marismortui} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>3q3u_A Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A {Trametes cervina} SCOP: a.93.1.0 Back     alignment and structure
>3riv_A Ascorbate peroxidase; alpha helical bundle, heme peroxidase, oxidoreductase; HET: HEM; 1.76A {Leishmania major} PDB: 3riw_A* 4ged_A* Back     alignment and structure
>3e2o_A CCP, cytochrome C peroxidase; cytochrome C peroxidase (CCP), heme, hydrogen peroxide, iron, metal-binding, mitochondrion; HET: HEM; 1.06A {Saccharomyces cerevisiae} SCOP: a.93.1.1 PDB: 4a71_A* 1z53_A* 1kok_A* 1sbm_A* 1sdq_A* 1s73_A* 1zby_A* 1zbz_A* 2b0z_A* 2b10_A* 2b11_A* 2b12_A* 2cyp_A* 2ycg_A* 4a6z_A* 2v23_A* 1ebe_A* 3r98_A* 3r99_A* 1mkr_A* ... Back     alignment and structure
>3ut2_A Catalase-peroxidase 2; KATG, fungal, heme enzyme, oxidoreducta; HET: TOX HEM; 1.55A {Magnaporthe oryzae 70-15} Back     alignment and structure
>3n3r_A Catalase-peroxidase; E198A variant, tuberclosis, isonicotini hydrazide binding, oxidoreductase; HET: TOX HEM; 1.60A {Burkholderia pseudomallei} PDB: 3n3s_A* 3n3o_A* 2fxj_A* 3n3p_A* 2fxg_A* 3n3n_A* 2fxh_A* 2dv2_A* 3n3q_A* 2dv1_A* 1x7u_A* 1mwv_A* 2b2o_A* 2b2q_A* 2b2r_A* 2b2s_A* Back     alignment and structure
>3vli_A Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1.70A {Haloarcula marismortui} PDB: 3vlh_A* 3vlj_A* 3vlk_A* 3vll_A* 3uw8_A* 3vlm_A* 1itk_A* Back     alignment and structure
>1u2k_A Peroxidase/catalase HPI; KATG, catalase-peroxidase, C-terminal domain, oxidoreductase; 2.00A {Escherichia coli} SCOP: a.93.1.3 PDB: 1u2l_A 1u2j_A Back     alignment and structure
>2cca_A Peroxidase/catalase T; oxidoreductase, catalase-peroxidase, KATG, heme, hydrogen peroxide, iron, metal-binding, organic radical; HET: HEM; 2.0A {Mycobacterium tuberculosis} SCOP: a.93.1.3 a.93.1.3 PDB: 1sj2_A* 2ccd_A* Back     alignment and structure
>1itk_A Catalase-peroxidase; heme protein, oxidoreductase; HET: HEM; 2.00A {Haloarcula marismortui} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>3rrw_A Thylakoid lumenal 29 kDa protein, chloroplastic; chloroplast thylakoid lumen, plant protein; 2.50A {Arabidopsis thaliana} Back     alignment and structure
>1ub2_A Catalase-peroxidase; KATG, cyanobacteria, oxidoreductase; HET: HEM; 2.40A {Synechococcus elongatus} SCOP: a.93.1.3 a.93.1.3 Back     alignment and structure
>3vli_A Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1.70A {Haloarcula marismortui} PDB: 3vlh_A* 3vlj_A* 3vlk_A* 3vll_A* 3uw8_A* 3vlm_A* 1itk_A* Back     alignment and structure
>3n3r_A Catalase-peroxidase; E198A variant, tuberclosis, isonicotini hydrazide binding, oxidoreductase; HET: TOX HEM; 1.60A {Burkholderia pseudomallei} PDB: 3n3s_A* 3n3o_A* 2fxj_A* 3n3p_A* 2fxg_A* 3n3n_A* 2fxh_A* 2dv2_A* 3n3q_A* 2dv1_A* 1x7u_A* 1mwv_A* 2b2o_A* 2b2q_A* 2b2r_A* 2b2s_A* Back     alignment and structure
>3ut2_A Catalase-peroxidase 2; KATG, fungal, heme enzyme, oxidoreducta; HET: TOX HEM; 1.55A {Magnaporthe oryzae 70-15} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 329
d1fhfa_304 a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine m 1e-103
d1scha_294 a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hy 1e-101
d1pa2a_306 a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (A 1e-101
d1bgpa_309 a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vu 2e-99
d1gwua_307 a.93.1.1 (A:) Plant peroxidase {Horseradish (Armor 8e-96
d1qgja_300 a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (A 6e-95
d1yyda1357 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) { 2e-51
d1llpa_343 a.93.1.1 (A:) Fungal peroxidase (ligninase) {White 5e-51
d2e39a1336 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) { 2e-48
d1oafa_250 a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glyci 9e-39
d2euta1291 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {B 1e-38
d1iyna_275 a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco 1e-38
d1mwva1406 a.93.1.3 (A:35-440) Catalase-peroxidase KatG {Burk 0.001
>d1fhfa_ a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine max) [TaxId: 3847]} Length = 304 Back     information, alignment and structure

class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Plant peroxidase
species: Soybean (Glycine max) [TaxId: 3847]

 Score =  303 bits (778), Expect = e-103
 Identities = 114/304 (37%), Positives = 168/304 (55%), Gaps = 15/304 (4%)

Query: 22  LTPNFYSSSCPEAESIIFNVVQRRFNTDRSITGALLRMHFHDCFSGNVCDASILIDSTIR 81
           LTP FY  +CP    I+F V+     TD  I  +L+R+HFHDCF    CD S+L+++T  
Sbjct: 2   LTPTFYRETCPNLFPIVFGVIFDASFTDPRIGASLMRLHFHDCFVQG-CDGSVLLNNTDT 60

Query: 82  SQPEKDSGSNLT-VRGYEIIDEIKNAVEQKCPSTVSCADIIALATRDAVALAGGLNYSLP 140
            + E+D+  N+  +RG +++++IK AVE  CP TVSCADI+A+A   A  L GG  + +P
Sbjct: 61  IESEQDALPNINSIRGLDVVNDIKTAVENSCPDTVSCADILAIAAEIASVLGGGPGWPVP 120

Query: 141 TGRLDGLRSNADEV--NLPGTSLSVPNVLQMFAEKGFNTTETVVILGAHTVGVVHCSFFQ 198
            GR D L +N      NLP    ++  +   FA +G NT + V + G HT G   CS F 
Sbjct: 121 LGRRDSLTANRTLANQNLPAPFFNLTQLKASFAVQGLNTLDLVTLSGGHTFGRARCSTFI 180

Query: 199 DRL--------ADSDMDPAFAQELSKACEASSGSDDPMTNLDRGTPTSLDSQYYNQTLFK 250
           +RL         D  ++  + + L   C   + + D +TNLD  TP   D++YY+  L  
Sbjct: 181 NRLYNFSNTGNPDPTLNTTYLEVLRARCP-QNATGDNLTNLDLSTPDQFDNRYYSNLLQL 239

Query: 251 RGVLQIDQALALD--ASTHDIVAHFANDEDDFQLSFANVMVKLGSLQVLTDGQGEIRQNC 308
            G+LQ DQ L     A T  IV  F+++++ F  +F   M+K+G++ VLT  +GEIR  C
Sbjct: 240 NGLLQSDQELFSTPGADTIPIVNSFSSNQNTFFSNFRVSMIKMGNIGVLTGDEGEIRLQC 299

Query: 309 RAFN 312
              N
Sbjct: 300 NFVN 303
>d1scha_ a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hypogaea) [TaxId: 3818]} Length = 294 Back     information, alignment and structure
>d1pa2a_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase A2 [TaxId: 3702]} Length = 306 Back     information, alignment and structure
>d1bgpa_ a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vulgare), peroxidase 1 [TaxId: 4513]} Length = 309 Back     information, alignment and structure
>d1gwua_ a.93.1.1 (A:) Plant peroxidase {Horseradish (Armoracia rusticana) [TaxId: 3704]} Length = 307 Back     information, alignment and structure
>d1qgja_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase N [TaxId: 3702]} Length = 300 Back     information, alignment and structure
>d1yyda1 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) {Basidomycetos fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Length = 357 Back     information, alignment and structure
>d1llpa_ a.93.1.1 (A:) Fungal peroxidase (ligninase) {White rot basidiomycete (Phanerochaete chrysosporium) [TaxId: 5306]} Length = 343 Back     information, alignment and structure
>d2e39a1 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) {Arthromyces ramosus [TaxId: 5451]} Length = 336 Back     information, alignment and structure
>d1oafa_ a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glycine max) [TaxId: 3847]} Length = 250 Back     information, alignment and structure
>d2euta1 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 291 Back     information, alignment and structure
>d1iyna_ a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 275 Back     information, alignment and structure
>d1mwva1 a.93.1.3 (A:35-440) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Length = 406 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query329
d1fhfa_304 Plant peroxidase {Soybean (Glycine max) [TaxId: 38 100.0
d1pa2a_306 Plant peroxidase {Mouse-ear cress (Arabidopsis tha 100.0
d1bgpa_309 Plant peroxidase {Barley (Hordeum vulgare), peroxi 100.0
d1qgja_300 Plant peroxidase {Mouse-ear cress (Arabidopsis tha 100.0
d1gwua_307 Plant peroxidase {Horseradish (Armoracia rusticana 100.0
d1scha_294 Plant peroxidase {Peanut (Arachis hypogaea) [TaxId 100.0
d1iyna_275 Ascorbate peroxidase {Common tobacco (Nicotiana ta 100.0
d1yyda1357 Fungal peroxidase (ligninase) {Basidomycetos fungu 100.0
d1oafa_250 Ascorbate peroxidase {Soybean (Glycine max) [TaxId 100.0
d2e39a1336 Fungal peroxidase (ligninase) {Arthromyces ramosus 100.0
d1llpa_343 Fungal peroxidase (ligninase) {White rot basidiomy 100.0
d2euta1291 Cytochrome c peroxidase, CCP {Baker's yeast (Sacch 100.0
d1mwva2308 Catalase-peroxidase KatG {Burkholderia pseudomalle 100.0
d1u2ka_292 Catalase-peroxidase KatG {Burkholderia pseudomalle 100.0
d1itka2308 Catalase-peroxidase KatG {Archaeon Haloarcula mari 100.0
d1ub2a2294 Catalase-peroxidase KatG {Synechococcus sp. pcc 79 100.0
d1itka1406 Catalase-peroxidase KatG {Archaeon Haloarcula mari 100.0
d1mwva1406 Catalase-peroxidase KatG {Burkholderia pseudomalle 100.0
d2ccaa1410 Catalase-peroxidase KatG {Mycobacterium tuberculos 100.0
d1ub2a1406 Catalase-peroxidase KatG {Synechococcus sp. pcc 79 100.0
d2ccaa2285 Catalase-peroxidase KatG {Mycobacterium tuberculos 100.0
>d1fhfa_ a.93.1.1 (A:) Plant peroxidase {Soybean (Glycine max) [TaxId: 3847]} Back     information, alignment and structure
class: All alpha proteins
fold: Heme-dependent peroxidases
superfamily: Heme-dependent peroxidases
family: CCP-like
domain: Plant peroxidase
species: Soybean (Glycine max) [TaxId: 3847]

Probab=100.00  E-value=7.8e-101  Score=731.49  Aligned_cols=290  Identities=39%  Similarity=0.704  Sum_probs=279.9

Q ss_pred             CCCccccccCCccHHHHHHHHHHHHHhhCCCcHHHHHHHHhhcccCCCCCCcceeccCCCCCCCCCCCCCCCC-CchhHH
Q 040171           21 KLTPNFYSSSCPEAESIIFNVVQRRFNTDRSITGALLRMHFHDCFSGNVCDASILIDSTIRSQPEKDSGSNLT-VRGYEI   99 (329)
Q Consensus        21 ~L~~~fY~~sCP~~e~iV~~~v~~~~~~~~~~a~~llRL~FHDcfv~~GcDgSill~~~~~~~~E~~~~~N~~-L~g~~~   99 (329)
                      ||+.+||++|||++|+||+++|++.+.+||+++|+||||+||||||+ ||||||||+++.++.+|+++++|.+ ++||++
T Consensus         1 qL~~~~Y~~sCp~~e~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv~-GCDgSill~~~~~~~~E~~~~~N~~~~~g~~~   79 (304)
T d1fhfa_           1 QLTPTFYRETCPNLFPIVFGVIFDASFTDPRIGASLMRLHFHDCFVQ-GCDGSVLLNNTDTIESEQDALPNINSIRGLDV   79 (304)
T ss_dssp             CCBTTTTTTTSTTHHHHHHHHHHHTTSSCTTHHHHHHHHHHHHHTTT-CSSSGGGCCCCSSCCCGGGSTTTTTTCCCHHH
T ss_pred             CCCCccccccCcCHHHHHHHHHHHHHHhCCchhHHHHHHHHHhhccC-CCCeeEeecCCCCccccccCCcccccchhHHH
Confidence            79999999999999999999999999999999999999999999999 9999999999888889999999986 599999


Q ss_pred             HHHHHHHHhhhCCCCCCHHHHHHHhHHHHHHHhCCCCcccCCCCCCCCCCCCCCC--CCCCCCCCHHHHHHHHHHcCCCc
Q 040171          100 IDEIKNAVEQKCPSTVSCADIIALATRDAVALAGGLNYSLPTGRLDGLRSNADEV--NLPGTSLSVPNVLQMFAEKGFNT  177 (329)
Q Consensus       100 Id~iK~~le~~cp~~VScADilalAar~av~~~GGP~~~v~~GR~D~~~s~~~~~--~LP~p~~~~~~l~~~F~~~Gls~  177 (329)
                      ||.||++||..||++||||||||||||+||+++|||.|+|++||+|+++|+..++  +||.|+.++++|++.|++||||.
T Consensus        80 id~iK~~le~~cp~~VScADIlalAardAv~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~  159 (304)
T d1fhfa_          80 VNDIKTAVENSCPDTVSCADILAIAAEIASVLGGGPGWPVPLGRRDSLTANRTLANQNLPAPFFNLTQLKASFAVQGLNT  159 (304)
T ss_dssp             HHHHHHHHHTTSTTTSCHHHHHHHHHHHHHHTTTCCCCCCCBCCCBCSCCCHHHHHHHSCCTTCCHHHHHHHHHHTTCCH
T ss_pred             HHHHHHHHHhhCCCccCHHHHHHHHHhhhhhhcCCCcccccCCCcCcCccccccccccCCCCCCCHHHHHHHHHHcCCCH
Confidence            9999999999999999999999999999999999999999999999999987655  79999999999999999999999


Q ss_pred             ccceeecccceeccccccccCCcC--------CCCCCCHHHHHHHHhhCCCCCCCCCCCCCCCCCCCcccChHHHHHhhh
Q 040171          178 TETVVILGAHTVGVVHCSFFQDRL--------ADSDMDPAFAQELSKACEASSGSDDPMTNLDRGTPTSLDSQYYNQTLF  249 (329)
Q Consensus       178 ~dlVaLsGaHTiG~~hc~~f~~Rl--------~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~lD~~tp~~FDN~Yy~~l~~  249 (329)
                      +||||||||||||++||.+|..|+        +||++++.|+..|++.||..+... +++.+|..||.+|||+||++++.
T Consensus       160 ~d~VaLsGaHTiG~ahc~~~~~rl~~~~~~~~~d~~~~~~~~~~L~~~c~~~~~~~-~~~~~d~~tp~~fDn~Yy~~l~~  238 (304)
T d1fhfa_         160 LDLVTLSGGHTFGRARCSTFINRLYNFSNTGNPDPTLNTTYLEVLRARCPQNATGD-NLTNLDLSTPDQFDNRYYSNLLQ  238 (304)
T ss_dssp             HHHHHHGGGGGSCEEEGGGTGGGTSCGGGSSSCCTTSCHHHHHHHHHHSCSSCSSC-CEEESCSSSTTSCSTHHHHHHHT
T ss_pred             HHHHHHhhhhhhcccccccccccccCCCCCCCCCcccCHHHHHHHHHhcCCCCCCC-cccccCCCCCCccccHHHHHHhh
Confidence            999999999999999999999998        689999999999999999876555 78889999999999999999999


Q ss_pred             cccCccchhhhccCc--chHHHHhhhccChhHHHHHHHHHHHHHhcCCCCCCCCccccccccccc
Q 040171          250 KRGVLQIDQALALDA--STHDIVAHFANDEDDFQLSFANVMVKLGSLQVLTDGQGEIRQNCRAFN  312 (329)
Q Consensus       250 ~~gll~SD~~L~~d~--~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv~tg~~GeiR~~C~~~n  312 (329)
                      ++|+|+||++|+.|+  +|+++|++||.||++|+++|++||+||++|+||||.+||||++|+.+|
T Consensus       239 ~~glL~SD~~L~~dp~~~t~~~V~~yA~d~~~F~~~F~~Am~Km~~lgv~tg~~GeiR~~C~~~N  303 (304)
T d1fhfa_         239 LNGLLQSDQELFSTPGADTIPIVNSFSSNQNTFFSNFRVSMIKMGNIGVLTGDEGEIRLQCNFVN  303 (304)
T ss_dssp             TCCSSHHHHTTTSSTTCSSHHHHHHHHHCHHHHHHHHHHHHHHHTTTTCCCTTSSBCCSBTTBCC
T ss_pred             cCcccHhhHHHHhCCCchHHHHHHHHhhCHHHHHHHHHHHHHHHhcCCCCCCCCCcccCcccCcC
Confidence            999999999999996  799999999999999999999999999999999999999999999998
>d1pa2a_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase A2 [TaxId: 3702]} Back     information, alignment and structure
>d1bgpa_ a.93.1.1 (A:) Plant peroxidase {Barley (Hordeum vulgare), peroxidase 1 [TaxId: 4513]} Back     information, alignment and structure
>d1qgja_ a.93.1.1 (A:) Plant peroxidase {Mouse-ear cress (Arabidopsis thaliana), peroxidase N [TaxId: 3702]} Back     information, alignment and structure
>d1gwua_ a.93.1.1 (A:) Plant peroxidase {Horseradish (Armoracia rusticana) [TaxId: 3704]} Back     information, alignment and structure
>d1scha_ a.93.1.1 (A:) Plant peroxidase {Peanut (Arachis hypogaea) [TaxId: 3818]} Back     information, alignment and structure
>d1iyna_ a.93.1.1 (A:) Ascorbate peroxidase {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Back     information, alignment and structure
>d1yyda1 a.93.1.1 (A:1-357) Fungal peroxidase (ligninase) {Basidomycetos fungus (Phanerochaete chrysosporium) [TaxId: 5306]} Back     information, alignment and structure
>d1oafa_ a.93.1.1 (A:) Ascorbate peroxidase {Soybean (Glycine max) [TaxId: 3847]} Back     information, alignment and structure
>d2e39a1 a.93.1.1 (A:9-344) Fungal peroxidase (ligninase) {Arthromyces ramosus [TaxId: 5451]} Back     information, alignment and structure
>d1llpa_ a.93.1.1 (A:) Fungal peroxidase (ligninase) {White rot basidiomycete (Phanerochaete chrysosporium) [TaxId: 5306]} Back     information, alignment and structure
>d2euta1 a.93.1.1 (A:4-294) Cytochrome c peroxidase, CCP {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1mwva2 a.93.1.3 (A:441-748) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d1u2ka_ a.93.1.3 (A:) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d1itka2 a.93.1.3 (A:424-731) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} Back     information, alignment and structure
>d1ub2a2 a.93.1.3 (A:427-720) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]} Back     information, alignment and structure
>d1itka1 a.93.1.3 (A:18-423) Catalase-peroxidase KatG {Archaeon Haloarcula marismortui [TaxId: 2238]} Back     information, alignment and structure
>d1mwva1 a.93.1.3 (A:35-440) Catalase-peroxidase KatG {Burkholderia pseudomallei [TaxId: 28450]} Back     information, alignment and structure
>d2ccaa1 a.93.1.3 (A:26-435) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1ub2a1 a.93.1.3 (A:21-426) Catalase-peroxidase KatG {Synechococcus sp. pcc 7942 [TaxId: 1140]} Back     information, alignment and structure
>d2ccaa2 a.93.1.3 (A:436-720) Catalase-peroxidase KatG {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure