Citrus Sinensis ID: 040213

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760----

MGSEVKSDEDTDNKGQVWFVNHKFDHLVDEEAERHSDANVKNRLSALLLMRFAFKSLGVVYGDLGTSPMYVLYNTFPDGIKDTEDVIDALSLIIYTLTIIPLIKYVLIVCRANDNGQGGTFALYSLLCRHAKLRTIPNQDRSDEELTTYSRSTFHERSHAAKTKRWLEKHSCSKIVLLVLVLVGSSMVIGDGILTPAISEAVVLVAVAILVVLFSVQHFGVDKVGWLFAPIVFVWFLLIGGIGIINIWKYDSSVLKAFSPVHVYWFFRKGHTWPSLGSIILCITGTEALFADVCQFPVLSIQIAFATVVYPCLLLAYIGQAAYLMKKPDHVHDVFYRSIPDIIYWPVFVVATAAAVVASQATISATFSLIKQAVALGCFPRVKVMHTSKKYSSHIYIPEINWILMILCVAVTAGFKNQHQIGNACGFAVVIVMLVTTLIMILIMLLVWRCHWILVLIFTVLSLLVEGTYFSAMIFKIHRGGWVPLVIAAAFFISMSVWHYGTMKRHQFELQSKVPIEWILGLGPSLGLVRVPGVGLVYSELANGVPHIFAHFITNLPAIHSVVIFVCVKYIPVYTVPEGERFLVTRVGPKSFHMFHCAARYGYKDLHKRDDEFEKNLFENLFRFMRLESLMDSCMASEVYSPCDQGDSKDDANLPDPHKVTTTFSPNSIVSVVSPEYTVRTMSSSQMISQDEIDELEFLTNSRDTGVVHILGKTVMMARRDSEFYKKILIDYIFTFLRKICRENNAIFYCPRECLLNVGQVIIV

ccccccccccccccccccccccccccccHHHHHccccccccccHHHHHHHHHHHHHHcEEEccccccHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHEEEEEEEEccccccHHHHHHHHHHccccccccccccccHHHHHcccccccccccHHHHHHHHHHHcccccccHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHcccccHHHHccHHHHHHHHHHHHHHHHHHHHHcccccEEEEccHHHHHHHHHccccEEEcccHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHcHHHHHcccccccccccHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEccccccccEEEcHHHHHHHHHHHHEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHcccccccccccccEEEEcccccccHHHHHHHHHHcccccEEEEEEEEEEEcccccccccEEEEEEEccccccEEEEEEEEccccccccHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHcccEEEcEEEEEEEcccccHHHHHHHHHHHHHHHHHHcccccccccccccEEEEEEEEEc

ccccccccccccccccccccccccccccHHHHcccccccccccccHHHHHHHHHHHccEEEcccccccEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHEEEEEEcccccccHHHHHHHHHHHHccccccccccHHHHHHHHcccccccHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHEccccccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHEcccHHHHHHccHHHHHHHHHccccEEEccHEEEEEccHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEccccccEEEcHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHcHHHEEEEHcccccHHHHHHHccccccEEcccEEEEHHHHHccccHHHHHHHHccccHEEEEEEEEEEEcccccccHHHEEEEEEcccccccEEEEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccEEcccccccccHHHHHHHHHHHHHHHccEEEEEEccEEEEccccHHHHHHHHHHHHHHHHHHcccccEEEEcccHHHEEEEEEEEc

mgsevksdedtdnkgqVWFVNHkfdhlvdeeaerhsdaNVKNRLSALLLMRFAFKSLGVVygdlgtspmyvlyntfpdgikdTEDVIDALSLIIYTLTIIPLIKYVLIVCrandngqggTFALYSLLCRHAklrtipnqdrsdeelttysrstfherSHAAKTKRWLEKHSCSKIVLLVLVLVGSsmvigdgiltPAISEAVVLVAVAILVVLFSVQhfgvdkvgwLFAPIVFVWFLLIGGIGIINIWKydssvlkafspVHVYWFFrkghtwpslGSIILCITGTEALFADVCQFPVLSIQIAFATVVYPCLLLAYIGQAAYlmkkpdhvhdvfyrsipdiiywPVFVVATAAAVVASQATISATFSLIKQAVALgcfprvkvmhtskkysshiyipeINWILMILCVAVtagfknqhqigNACGFAVVIVMLVTTLIMILIMLLVWRCHWILVLIFTVLSLLVEGTYFSAMIFKIHRGGWVPLVIAAAFFISMSVWhygtmkrhqfelqskvpiewilglgpslglvrvpgvGLVYSELANGVPHIFAHFITNLPAIHSVVIFVCVkyipvytvpegerflvtrvgpksfhmFHCAarygykdlhkrDDEFEKNLFENLFRFMRLESLMDScmasevyspcdqgdskddanlpdphkvtttfspnsivsvvspeytvrtmsssqmisqDEIDELefltnsrdtgvvHILGKTVMMARRDSEFYKKILIDYIFTFLRKICRennaifycprecllnvgqviiv

mgsevksdedtdnkgqvWFVNHKFDHLVDeeaerhsdanVKNRLSALLLMRFAFKSLGVVYGDLGTSPMYVLYNTFPDGIKDTEDVIDALSLIIYTLTIIPLIKYVLIVCRANDNGQGGTFALYSLLCRHAKLrtipnqdrsdeelttysrstfhershaaktkrwlekhscSKIVLLVLVLVGSSMVIGDGILTPAISEAVVLVAVAILVVLFSVQHFGVDKVGWLFAPIVFVWFLLIGGIGIINIWKYDSSVLKAFSPVHVYWFFRKGHTWPSLGSIILCITGTEALFADVCQFPVLSIQIAFATVVYPCLLLAYIGQAAYLMKKPDHVHDVFYRSIPDIIYWPVFVVATAAAVVASQATISATFSLIKQAVALGCFPRVKVMHTSKKYSSHIYIPEINWILMILCVAVTAGFKNQHQIGNACGFAVVIVMLVTTLIMILIMLLVWRCHWILVLIFTVLSLLVEGTYFSAMIFKIHRGGWVPLVIAAAFFISMSVWHYGTMKRHQFELQSKVPIEWILGLGPSLGLVRVPGVGLVYSELANGVPHIFAHFITNLPAIHSVVIFVCVKYIPVYTVPEGERFLVTRVGPKSFHMFHCAARYGYKDLHKRDDEFEKNLFENLFRFMRLESLMDSCMASEVYSPCDQGDSKDDANLPDPHkvtttfspnsivsvVSPEYTVRTMSSSQMISQDEIDELEfltnsrdtgvvhilgktvmmarrdseFYKKILIDYIFTFLRKICRENNAIfycprecllnvgqviiv

MGSEVKSDEDTDNKGQVWFVNHKFDHLVDEEAERHSDANVKNRLSALLLMRFAFKSLGVVYGDLGTSPMYVLYNTFPDGIKDTEDVIDAlsliiytltiipliKYVLIVCRANDNGQGGTFALYSLLCRHAKLRTIPNQDRSDEELTTYSRSTFHERSHAAKTKRWLEKHSCSKIvllvlvlvGSSMVIGDGILTPAISEavvlvavailvvlFSVQHFGVDKVGWLFAPIVFVWFLLiggigiiniWKYDSSVLKAFSPVHVYWFFRKGHTWPSLGSIILCITGTEALFADVCQFPVLSIQIAFATVVYPCLLLAYIGQAAYLMKKPDHVHDVFYRSIPDIIYWPvfvvataaavvasqatisatFSLIKQAVALGCFPRVKVMHTSKKYSSHIYIPEINWILMILCVAVTAGFKNQHQIGNACGFAvvivmlvttlimilimllvWRCHWILVLIFTVLSLLVEGTYFSAMIFKIHRGGWVPLVIAAAFFISMSVWHYGTMKRHQFELQSKVPIEWIlglgpslglvrvpgvglvYSELANGVPHIFAHFITNLPAIHSVVIFVCVKYIPVYTVPEGERFLVTRVGPKSFHMFHCAARYGYKDLHKRDDEFEKNLFENLFRFMRLESLMDSCMASEVYSPCDQGDSKDDANLPDPHKVTTTFSPNSIVSVVSPEYTVRTMSSSQMISQDEIDELEFLTNSRDTGVVHILGKTVMMARRDSEFYKKILIDYIFTFLRKICRENNAIFYCPRECLLNVGQVIIV

***************QVWFVNHKFDHLVDE********NVKNRLSALLLMRFAFKSLGVVYGDLGTSPMYVLYNTFPDGIKDTEDVIDALSLIIYTLTIIPLIKYVLIVCRANDNGQGGTFALYSLLCRHAKLRTI**************************TKRWLEKHSCSKIVLLVLVLVGSSMVIGDGILTPAISEAVVLVAVAILVVLFSVQHFGVDKVGWLFAPIVFVWFLLIGGIGIINIWKYDSSVLKAFSPVHVYWFFRKGHTWPSLGSIILCITGTEALFADVCQFPVLSIQIAFATVVYPCLLLAYIGQAAYLMKKPDHVHDVFYRSIPDIIYWPVFVVATAAAVVASQATISATFSLIKQAVALGCFPRVKVMHTSKKYSSHIYIPEINWILMILCVAVTAGFKNQHQIGNACGFAVVIVMLVTTLIMILIMLLVWRCHWILVLIFTVLSLLVEGTYFSAMIFKIHRGGWVPLVIAAAFFISMSVWHYGTMKRHQFELQSKVPIEWILGLGPSLGLVRVPGVGLVYSELANGVPHIFAHFITNLPAIHSVVIFVCVKYIPVYTVPEGERFLVTRVGPKSFHMFHCAARYGYKDLHKRDDEFEKNLFENLFRFMRLESLMDSCMASEVY*******************************V*********************DELEFLTNSRDTGVVHILGKTVMMARRDSEFYKKILIDYIFTFLRKICRENNAIFYCPRECLLNVGQVII*

************************************************LMRFAFKSLGVVYGDLGTSPMYVLYNTFPDGIKDTEDVIDALSLIIYTLTIIPLIKYVLIVCRANDNGQGGTFALYSLLCRHAKLRTIPNQDRSDEELTTYSRSTFHERSHAAKTKRWLEKHSCSKIVLLVLVLVGSSMVIGDGILTPAISEAVVLVAVAILVVLFSVQHFGVDKVGWLFAPIVFVWFLLIGGIGIINIWKYDSSVLKAFSPVHVYWFFRKGHTWPSLGSIILCITGTEALFADVCQFPVLSIQIAFATVVYPCLLLAYIGQAAYLMKKPDHVHDVFYRSIPDIIYWPVFVVATAAAVVASQATISATFSLIKQAVALGCFPRVKVMHTSKKYSSHIYIPEINWILMILCVAVTAGFKNQHQIGNACGFAVVIVMLVTTLIMILIMLLVWRCHWILVLIFTVLSLLVEGTYFSAMIFKIHRGGWVPLVIAAAFFISMSVWHYGTMKRHQFELQSKVPIEWILGLGPSLGLVRVPGVGLVYSELANGVPHIFAHFITNLPAIHSVVIFVCVKYIPVYTVPEGERFLVTRVGPKSFHMFHCAARYGYKDLHKRDDEFEKNLFENLFRFMRLESLM*******************************************************************LTNSRDTGVVHILGKTVMMARRDSEFYKKILIDYIFTFLRKICRENNAIFYCPRECLLNVGQVIIV

************NKGQVWFVNHKFDHLVDEEAERHSDANVKNRLSALLLMRFAFKSLGVVYGDLGTSPMYVLYNTFPDGIKDTEDVIDALSLIIYTLTIIPLIKYVLIVCRANDNGQGGTFALYSLLCRHAKLRTIPNQDRSDEELTTYSRST*************LEKHSCSKIVLLVLVLVGSSMVIGDGILTPAISEAVVLVAVAILVVLFSVQHFGVDKVGWLFAPIVFVWFLLIGGIGIINIWKYDSSVLKAFSPVHVYWFFRKGHTWPSLGSIILCITGTEALFADVCQFPVLSIQIAFATVVYPCLLLAYIGQAAYLMKKPDHVHDVFYRSIPDIIYWPVFVVATAAAVVASQATISATFSLIKQAVALGCFPRVKVMHTSKKYSSHIYIPEINWILMILCVAVTAGFKNQHQIGNACGFAVVIVMLVTTLIMILIMLLVWRCHWILVLIFTVLSLLVEGTYFSAMIFKIHRGGWVPLVIAAAFFISMSVWHYGTMKRHQFELQSKVPIEWILGLGPSLGLVRVPGVGLVYSELANGVPHIFAHFITNLPAIHSVVIFVCVKYIPVYTVPEGERFLVTRVGPKSFHMFHCAARYGYKDLHKRDDEFEKNLFENLFRFMRLESLMDSCMASEVYSPCDQGDSKDDANLPDPHKVTTTFSPNSIVSVVSPEYTVRTMSSSQMISQDEIDELEFLTNSRDTGVVHILGKTVMMARRDSEFYKKILIDYIFTFLRKICRENNAIFYCPRECLLNVGQVIIV

*******************************************LSALLLMRFAFKSLGVVYGDLGTSPMYVLYNTFPDGIKDTEDVIDALSLIIYTLTIIPLIKYVLIVCRANDNGQGGTFALYSLLCRHAKLRTIPNQDRSDEELTTYSRSTFHERSHAAKTKRWLEKHSCSKIVLLVLVLVGSSMVIGDGILTPAISEAVVLVAVAILVVLFSVQHFGVDKVGWLFAPIVFVWFLLIGGIGIINIWKYDSSVLKAFSPVHVYWFFRKGHTWPSLGSIILCITGTEALFADVCQFPVLSIQIAFATVVYPCLLLAYIGQAAYLMKKPDHVHDVFYRSIPDIIYWPVFVVATAAAVVASQATISATFSLIKQAVALGCFPRVKVMHTSKKYSSHIYIPEINWILMILCVAVTAGFKNQHQIGNACGFAVVIVMLVTTLIMILIMLLVWRCHWILVLIFTVLSLLVEGTYFSAMIFKIHRGGWVPLVIAAAFFISMSVWHYGTMKRHQFELQSKVPIEWILGLGPSLGLVRVPGVGLVYSELANGVPHIFAHFITNLPAIHSVVIFVCVKYIPVYTVPEGERFLVTRVGPKSFHMFHCAARYGYKDLHKRDDEFEKNLFENLFRFMRLESLMD****************************************************SQMISQDEIDELEFLTNSRDTGVVHILGKTVMMARRDSEFYKKILIDYIFTFLRKICRENNAIFYCPRECLLNVGQVIIV

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		764	2.2.26 [Sep-21-2011]
O64769		792	Potassium transporter 11	yes	no	0.992	0.957	0.648	0.0
Q9SA05		796	Potassium transporter 10	no	no	0.989	0.949	0.650	0.0
Q8VXB1		793	Putative potassium transp	yes	no	0.984	0.948	0.627	0.0
Q7XLC6		791	Probable potassium transp	yes	no	0.988	0.954	0.617	0.0
Q653B6		793	Potassium transporter 18	no	no	0.994	0.958	0.611	0.0
O49423		807	Potassium transporter 9 O	no	no	0.998	0.945	0.596	0.0
Q6H4R6		877	Potassium transporter 23	no	no	0.950	0.827	0.455	0.0
Q942X8		783	Probable potassium transp	no	no	0.958	0.934	0.462	0.0
Q9M7K4		785	Potassium transporter 5 O	no	no	0.982	0.956	0.431	0.0
O80739		827	Putative potassium transp	no	no	0.933	0.862	0.455	0.0

>sp\|O64769\|POT11_ARATH Potassium transporter 11 OS=Arabidopsis thaliana GN=POT11 PE=1 SV=1	Back alignment and function desciption

 Score = 1009 bits (2610), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 512/789 (64%), Positives = 626/789 (79%), Gaps = 31/789 (3%)

Query: 1   MGSEVKSDEDTDNKGQVWFVNHKFDHLVDEEAERHSDANVKNRLSALLLMRFAFKSLGVV 60
           MG E+  +E++D +G +W ++ K D  +DEEA R  +   + + SALLL++ +F+SLGVV
Sbjct: 10  MGGEI-DEEESDERGSMWDLDQKLDQSMDEEAGRLRNMYREKKFSALLLLQLSFQSLGVV 68

Query: 61  YGDLGTSPMYVLYNTFPDGIKDTEDVIDALSLIIYTLTIIPLIKYVLIVCRANDNGQGGT 120
           YGDLGTSP+YV YNTFP GIKD ED+I ALSLIIY+LT+IPL+KYV +VC+ANDNGQGGT
Sbjct: 69  YGDLGTSPLYVFYNTFPHGIKDPEDIIGALSLIIYSLTLIPLLKYVFVVCKANDNGQGGT 128

Query: 121 FALYSLLCRHAKLRTIPNQDRSDEELTTYSRSTFHERSHAAKTKRWLEKHSCSKIVLLVL 180
           FALYSLLCRHAK++TI NQ R+DEELTTYSR+TFHE S AAKTKRWLEK +  K  LL+L
Sbjct: 129 FALYSLLCRHAKVKTIQNQHRTDEELTTYSRTTFHEHSFAAKTKRWLEKRTSRKTALLIL 188

Query: 181 VLVGSSMVIGDGILTPAISEAVVLVAVAILVV--------------------LFSVQHFG 220
           VLVG+ MVIGDGILTPAIS   VL A   L V                    LFSVQH+G
Sbjct: 189 VLVGTCMVIGDGILTPAIS---VLSAAGGLRVNLPHISNGVVVFVAVVILVSLFSVQHYG 245

Query: 221 VDKVGWLFAPIVFVWFLLIGGIGIINIWKYDSSVLKAFSPVHVYWFFRKG--HTWPSLGS 278
            D+VGWLFAPIVF+WFL I  IG+ NIWK+D+SVLKAFSPV++Y +F++G    W SLG 
Sbjct: 246 TDRVGWLFAPIVFLWFLSIASIGMYNIWKHDTSVLKAFSPVYIYRYFKRGGRDRWTSLGG 305

Query: 279 IILCITGTEALFADVCQFPVLSIQIAFATVVYPCLLLAYIGQAAYLMKKPDHVHDVFYRS 338
           I+L ITG EALFAD+  FPV ++QIAF  +V+PCLLLAY GQAAY+ + PDHV D FYRS
Sbjct: 306 IMLSITGIEALFADLSHFPVSAVQIAFTVIVFPCLLLAYSGQAAYIRRYPDHVADAFYRS 365

Query: 339 IPDIIYWPVFVVATAAAVVASQATISATFSLIKQAVALGCFPRVKVMHTSKKYSSHIYIP 398
           IP  +YWP+F++ATAAA+VASQATISATFSL+KQA+A GCFPRVKV+HTS+K+   IY+P
Sbjct: 366 IPGSVYWPMFIIATAAAIVASQATISATFSLVKQALAHGCFPRVKVVHTSRKFLGQIYVP 425

Query: 399 EINWILMILCVAVTAGFKNQHQIGNACGFAVVIVMLVTTLIMILIMLLVWRCHWILVLIF 458
           +INWILMILC+AVTAGFKNQ QIGNA G AVVIVMLVTTL+M LIM+LVWRCHW+LVLIF
Sbjct: 426 DINWILMILCIAVTAGFKNQSQIGNAYGTAVVIVMLVTTLLMTLIMILVWRCHWVLVLIF 485

Query: 459 TVLSLLVEGTYFSAMIFKIHRGGWVPLVIAAAFFISMSVWHYGTMKRHQFELQSKVPIEW 518
           TVLSL+VE TYFSAM+FKI +GGWVPLVIAAAF + M VWHYGT+KR++FE+  +V + W
Sbjct: 486 TVLSLVVECTYFSAMLFKIDQGGWVPLVIAAAFLLIMWVWHYGTLKRYEFEMHCRVSMAW 545

Query: 519 ILGLGPSLGLVRVPGVGLVYSELANGVPHIFAHFITNLPAIHSVVIFVCVKYIPVYTVPE 578
           ILGLGPSLGLVRVPGVGLVY+ELA+GVPHIF+HFITNLPAIHSVV+FVCVK +PVYTVPE
Sbjct: 546 ILGLGPSLGLVRVPGVGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKNLPVYTVPE 605

Query: 579 GERFLVTRVGPKSFHMFHCAARYGYKDLHKRDDEFEKNLFENLFRFMRLESLMD-SCMAS 637
            ERFLV R+GPK+FHMF C ARYGY+DLHK+DD+FEK LFE+LF ++RLES+M+  C  S
Sbjct: 606 EERFLVKRIGPKNFHMFRCVARYGYRDLHKKDDDFEKRLFESLFLYVRLESMMEGGCSDS 665

Query: 638 EVYSPC-DQGDSKDDANLPDPHKVTTTFSP-NSIVSVVSPEYTVRTMSSSQMISQDEIDE 695
           + YS C  Q   KD     + ++   TF   +SI S+   +    T+++S  +S   +DE
Sbjct: 666 DDYSICGSQQQLKDTLGNGNENENLATFDTFDSIESITPVKRVSNTVTASSQMSG--VDE 723

Query: 696 LEFLTNSRDTGVVHILGKTVMMARRDSEFYKKILIDYIFTFLRKICRENNAIFYCPRECL 755
           LEF+   RD GVVHI+G TV+ ARR++ FYKKI IDY++ FLRKICRE++ I+  P+E L
Sbjct: 724 LEFINGCRDAGVVHIMGNTVVRARREARFYKKIAIDYVYAFLRKICREHSVIYNVPQESL 783

Query: 756 LNVGQVIIV 764
           LNVGQ+  V
Sbjct: 784 LNVGQIFYV 792

Probable potassium transporter.
Arabidopsis thaliana (taxid: 3702)

>sp\|Q9SA05\|POT10_ARATH Potassium transporter 10 OS=Arabidopsis thaliana GN=POT10 PE=2 SV=2	Back alignment and function description

>sp\|Q8VXB1\|HAK12_ORYSJ Putative potassium transporter 12 OS=Oryza sativa subsp. japonica GN=HAK12 PE=2 SV=1	Back alignment and function description

>sp\|Q7XLC6\|HAK11_ORYSJ Probable potassium transporter 11 OS=Oryza sativa subsp. japonica GN=HAK11 PE=2 SV=3	Back alignment and function description

>sp\|Q653B6\|HAK18_ORYSJ Potassium transporter 18 OS=Oryza sativa subsp. japonica GN=HAK18 PE=2 SV=1	Back alignment and function description

>sp\|O49423\|POT9_ARATH Potassium transporter 9 OS=Arabidopsis thaliana GN=POT9 PE=2 SV=2	Back alignment and function description

>sp\|Q6H4R6\|HAK23_ORYSJ Potassium transporter 23 OS=Oryza sativa subsp. japonica GN=HAK23 PE=2 SV=1	Back alignment and function description

>sp\|Q942X8\|HAK2_ORYSJ Probable potassium transporter 2 OS=Oryza sativa subsp. japonica GN=HAK2 PE=2 SV=1	Back alignment and function description

>sp\|Q9M7K4\|POT5_ARATH Potassium transporter 5 OS=Arabidopsis thaliana GN=POT5 PE=1 SV=1	Back alignment and function description

>sp\|O80739\|POT12_ARATH Putative potassium transporter 12 OS=Arabidopsis thaliana GN=POT12 PE=1 SV=2	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		764
356528128		791	PREDICTED: potassium transporter 11-like	0.996	0.962	0.671	0.0
359472756		790	PREDICTED: potassium transporter 11-like	1.0	0.967	0.686	0.0
356510798		791	PREDICTED: potassium transporter 11-like	0.996	0.962	0.663	0.0
348161633		790	potassium trasporter 1 [Amaranthus sp. L	0.990	0.958	0.669	0.0
224125216		792	predicted protein [Populus trichocarpa]	0.993	0.958	0.673	0.0
398025471		803	putative potassium transporter KUP11, pa	0.989	0.941	0.664	0.0
356556167		790	PREDICTED: probable potassium transporte	0.990	0.958	0.670	0.0
224125212		791	predicted protein [Populus trichocarpa]	0.998	0.964	0.667	0.0
224071529		792	predicted protein [Populus trichocarpa]	0.996	0.960	0.667	0.0
297737993		743	unnamed protein product [Vitis vinifera]	0.947	0.974	0.669	0.0

>gi\|356528128\|ref\|XP_003532657.1\| PREDICTED: potassium transporter 11-like [Glycine max]	Back alignment and taxonomy information

 Score = 1090 bits (2818), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 533/794 (67%), Positives = 630/794 (79%), Gaps = 33/794 (4%)

Query: 1   MGSEVKSDEDTDNKGQVWFVNHKFDHLVDEEAERHSDANVKNRLSALLLMRFAFKSLGVV 60
           MGS V +DED DN+G +W ++ K D  +DEEA R  +   + + SALLL+R AF+SLGVV
Sbjct: 1   MGSRVDTDEDNDNRGSMWDLDQKLDQPMDEEAGRLRNMYREKKFSALLLLRLAFQSLGVV 60

Query: 61  YGDLGTSPMYVLYNTFPDGIKDTEDVIDALSLIIYTLTIIPLIKYVLIVCRANDNGQGGT 120
           YGDLGTSP+YV YNTFP+G+KD EDVI ALSLIIY+LT++PL+KYV +V RANDNGQGGT
Sbjct: 61  YGDLGTSPLYVFYNTFPNGVKDEEDVIGALSLIIYSLTLVPLLKYVFVVLRANDNGQGGT 120

Query: 121 FALYSLLCRHAKLRTIPNQDRSDEELTTYSRSTFHERSHAAKTKRWLEKHSCSKIVLLVL 180
           FALYSLLCRHAK++TIPNQ R+DEELTTYSRSTFHERS AAKTKRWLE+   +K  +L+L
Sbjct: 121 FALYSLLCRHAKIKTIPNQHRTDEELTTYSRSTFHERSFAAKTKRWLEEQESAKRAILIL 180

Query: 181 VLVGSSMVIGDGILTPAISEAVVLVAVAILVV--------------------LFSVQHFG 220
           VLVG+ MVIGDGILTPAIS   VL AV  + V                     FS+QH+G
Sbjct: 181 VLVGTCMVIGDGILTPAIS---VLSAVGGIKVNQPRMSSGVVVLVAVVILVGFFSMQHYG 237

Query: 221 VDKVGWLFAPIVFVWFLLIGGIGIINIWKYDSSVLKAFSPVHVYWFFRKG--HTWPSLGS 278
            D+V WLFAPIV +WFLLIGGIGI NIWKY S VLKAFSPV++Y +FR+G    W SLG 
Sbjct: 238 TDRVSWLFAPIVLLWFLLIGGIGIFNIWKYGSGVLKAFSPVYIYRYFRRGGKEGWTSLGG 297

Query: 279 IILCITGTEALFADVCQFPVLSIQIAFATVVYPCLLLAYIGQAAYLMKKPDHVHDVFYRS 338
           I+L ITGTEALFAD+  FPV ++Q+AF  VV+PCLLLAY GQAAYLM    H  D FYRS
Sbjct: 298 IMLSITGTEALFADLAHFPVSAVQLAFTLVVFPCLLLAYSGQAAYLMNNLTHSQDAFYRS 357

Query: 339 IPDIIYWPVFVVATAAAVVASQATISATFSLIKQAVALGCFPRVKVMHTSKKYSSHIYIP 398
           IPD IYWPVF++AT AA+VASQATI+ATFS+IKQA+ALGCFPRVKV++TSKK+   IY+P
Sbjct: 358 IPDRIYWPVFIIATLAAIVASQATITATFSIIKQALALGCFPRVKVVYTSKKFLGQIYVP 417

Query: 399 EINWILMILCVAVTAGFKNQHQIGNACGFAVVIVMLVTTLIMILIMLLVWRCHWILVLIF 458
           +INWILMILC+AVTAGF+NQ+QIGNA G AVVIVMLVTTL+MILIM+LVWRCHWILVLIF
Sbjct: 418 DINWILMILCIAVTAGFENQNQIGNAYGTAVVIVMLVTTLLMILIMILVWRCHWILVLIF 477

Query: 459 TVLSLLVEGTYFSAMIFKIHRGGWVPLVIAAAFFISMSVWHYGTMKRHQFELQSKVPIEW 518
           T LSL+VE TYFS+++FK+ +GGWVPL IA AF I MSVWHYGT+KR++FE+ SKV + W
Sbjct: 478 TGLSLIVECTYFSSVLFKVDQGGWVPLAIAGAFLIIMSVWHYGTVKRYEFEMHSKVSMAW 537

Query: 519 ILGLGPSLGLVRVPGVGLVYSELANGVPHIFAHFITNLPAIHSVVIFVCVKYIPVYTVPE 578
           ILGLGPSLGLVRVPG+GLVY+ELA+GVPHIF+HFITNLPAIHSVV+FVCVKY+PVYTVPE
Sbjct: 538 ILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPE 597

Query: 579 GERFLVTRVGPKSFHMFHCAARYGYKDLHKRDDEFEKNLFENLFRFMRLESLMDSCMASE 638
            ERFLV R+GPK+FH+F C ARYGYKDLHK+DD+FEK LFENLF F+RLES+M+ C  S+
Sbjct: 598 AERFLVKRIGPKNFHIFRCVARYGYKDLHKKDDDFEKKLFENLFTFVRLESMMEGCSDSD 657

Query: 639 VYSPCDQ-------GDSKDDANLPDPHKVTTTFSPNSIVSVVSPEY-TVRTMSSSQMISQ 690
            YS C Q       G   ++ +    +   T  S +SIV V SP +  +   SS Q  SQ
Sbjct: 658 EYSLCGQQIEHPRGGLLHNNGSTVSSNMDLTMSSVDSIVPVRSPHHMNITVRSSGQTSSQ 717

Query: 691 DEIDELEFLTNSRDTGVVHILGKTVMMARRDSEFYKKILIDYIFTFLRKICRENNAIFYC 750
            E+DELEFLT  RD GVVHILG TV+ ARR+S FYKKI +DYI+ FLRKICREN  IF  
Sbjct: 718 TEVDELEFLTICRDAGVVHILGNTVVRARRESRFYKKIAVDYIYAFLRKICRENCVIFNV 777

Query: 751 PRECLLNVGQVIIV 764
           P E LLNVGQ+  V
Sbjct: 778 PHESLLNVGQIFYV 791

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|359472756\|ref\|XP_002276261.2\| PREDICTED: potassium transporter 11-like [Vitis vinifera] gi\|147778418\|emb\|CAN60810.1\| hypothetical protein VITISV_036657 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|356510798\|ref\|XP_003524121.1\| PREDICTED: potassium transporter 11-like [Glycine max]	Back alignment and taxonomy information

>gi\|348161633\|gb\|AEP68018.1\| potassium trasporter 1 [Amaranthus sp. LHY-2011]	Back alignment and taxonomy information

>gi\|224125216\|ref\|XP_002329922.1\| predicted protein [Populus trichocarpa] gi\|222871159\|gb\|EEF08290.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|398025471\|gb\|AFO70207.1\| putative potassium transporter KUP11, partial [Alternanthera philoxeroides]	Back alignment and taxonomy information

>gi\|356556167\|ref\|XP_003546398.1\| PREDICTED: probable potassium transporter 11-like [Glycine max]	Back alignment and taxonomy information

>gi\|224125212\|ref\|XP_002329921.1\| predicted protein [Populus trichocarpa] gi\|222871158\|gb\|EEF08289.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|224071529\|ref\|XP_002303503.1\| predicted protein [Populus trichocarpa] gi\|222840935\|gb\|EEE78482.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|297737993\|emb\|CBI27194.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		764
TAIR\|locus:2029589		796	KUP10 "K+ uptake permease 10"	0.718	0.689	0.573	6.5e-234
TAIR\|locus:2044717		793	KUP11 "K+ uptake permease 11"	0.718	0.692	0.568	3.6e-233
TAIR\|locus:2119812		823	KUP9 "AT4G19960" [Arabidopsis	0.659	0.612	0.496	1.4e-185
TAIR\|locus:2195688		827	AT1G60160 [Arabidopsis thalian	0.714	0.660	0.388	5.1e-138
TAIR\|locus:2078688		789	KUP3 "AT3G02050" [Arabidopsis	0.613	0.594	0.389	1e-135
TAIR\|locus:2184722		858	KUP7 "K+ uptake permease 7" [A	0.633	0.564	0.384	1.3e-135
TAIR\|locus:2016139		782	KUP6 "K+ uptake permease 6" [A	0.544	0.531	0.415	1.2e-134
TAIR\|locus:2061838		794	KT2 "potassium transporter 2"	0.543	0.522	0.421	1.9e-134
TAIR\|locus:2142110		785	HAK5 "high affinity K+ transpo	0.969	0.943	0.362	1.4e-133
TAIR\|locus:2185515		781	KUP8 "potassium uptake 8" [Ara	0.721	0.705	0.384	3.3e-132

TAIR\|locus:2029589 KUP10 "K+ uptake permease 10" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 1686 (598.6 bits), Expect = 6.5e-234, Sum P(2) = 6.5e-234
 Identities = 322/561 (57%), Positives = 397/561 (70%)

Query:   214 FSVQHFGVDKVGWLFAPIVFVWFLLXXXXXXXXXWKYDSSVLKAFSPVHVYWFFRKG--H 271
             FSVQH+G D+VGWLFAPIVF+WFL          WK+D SVLKAFSPV+++ +F++G   
Sbjct:   238 FSVQHYGTDRVGWLFAPIVFLWFLFIASIGMFNIWKHDPSVLKAFSPVYIFRYFKRGGQD 297

Query:   272 TWPSLGSIILCITGTEALFADVCQFPVLSIQIAFATVVYPCLLLAYIGQAAYLMKKPDHV 331
              W SLG I+L ITG EALFAD+  FPV ++Q AF  +V+PCLLLAY GQAAYL K P HV
Sbjct:   298 RWTSLGGIMLSITGIEALFADLSHFPVSAVQFAFTVIVFPCLLLAYSGQAAYLRKYPHHV 357

Query:   332 HDVFYRSIPDIIYWPXXXXXXXXXXXXXXXXXXXXFSLIKQAVALGCFPRVKVMHTSKKY 391
              D FY+SIP  +YWP                    FSLIKQA+A GCFPRVKV+HTS+K+
Sbjct:   358 EDAFYQSIPKRVYWPMFIIATAAAIVASQATISATFSLIKQALAHGCFPRVKVVHTSRKF 417

Query:   392 SSHIYIPEINWILMILCVAVTAGFKNQHQIGNACGFAXXXXXXXXXXXXXXXXXXXWRCH 451
                IY+P+INWILMILC+AVTAGFKNQ+QIGNA G A                   WRCH
Sbjct:   418 LGQIYVPDINWILMILCIAVTAGFKNQNQIGNAYGTAVVIVMLVTTLLMMLIMILVWRCH 477

Query:   452 WILVLIFTVLSLLVEGTYFSAMIFKIHRGGWVPLVIAAAFFISMSVWHYGTMKRHQFELQ 511
             W+LVL+FT+LSL+VE TYFSA++FK+++GGWVPLVIAAAF + M VWHYGT+KR++FE+ 
Sbjct:   478 WVLVLLFTLLSLVVECTYFSAVLFKVNQGGWVPLVIAAAFLVIMYVWHYGTLKRYEFEMH 537

Query:   512 SKVPIEWIXXXXXXXXXXXXXXXXXXYSELANGVPHIFAHFITNLPAIHSVVIFVCVKYI 571
             SKV + WI                  Y+ELA+GVPHIF+HFITNLPA HSVVIFVCVK +
Sbjct:   538 SKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPATHSVVIFVCVKNL 597

Query:   572 PVYTVPEGERFLVTRVGPKSFHMFHCAARYGYKDLHKRDDEFEKNLFENLFRFMRLESLM 631
             PVYTVP+ ERFLV R+GPK+FHMF C ARYGY+DLHK+DD+FEK LFE+LF F+RLES+M
Sbjct:   598 PVYTVPQEERFLVKRIGPKNFHMFRCVARYGYRDLHKKDDDFEKRLFESLFLFLRLESMM 657

Query:   632 DSCMASEVYSPC--DQGDSKD--DANLPDPHKVTTTFSPNSIVSVVSPEYTVRTM----S 683
             + C  SE YS C   Q  S+D  + N  +   V+T  + +SI SV++P  T RT      
Sbjct:   658 EGCSDSEDYSVCGSQQRQSRDGVNGNGNEIRNVSTFDTFDSIESVIAPTTTKRTSHTVTG 717

Query:   684 SSQMISQDEIDELEFLTNSRDTGVVHILGKTVMMARRDSEFYKKILIDYIFTFLRKICRE 743
             SSQM      DE+EF+   RD GVVHI+G TV+ ARR++ FYK+I IDY++ FLRKICRE
Sbjct:   718 SSQMSGGG--DEVEFINGCRDAGVVHIMGNTVVRARREARFYKRIAIDYVYAFLRKICRE 775

Query:   744 NNAIFYCPRECLLNVGQVIIV 764
             N+AIF  P+E LLNVGQ+  V
Sbjct:   776 NSAIFNVPQESLLNVGQIFYV 796

GO:0005737 "cytoplasm" evidence=ISM

GO:0006813 "potassium ion transport" evidence=ISS

GO:0015079 "potassium ion transmembrane transporter activity" evidence=IEA;ISS

GO:0016020 "membrane" evidence=IEA

GO:0071805 "potassium ion transmembrane transport" evidence=IEA

TAIR\|locus:2044717 KUP11 "K+ uptake permease 11" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2119812 KUP9 "AT4G19960" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2195688 AT1G60160 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2078688 KUP3 "AT3G02050" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2184722 KUP7 "K+ uptake permease 7" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2016139 KUP6 "K+ uptake permease 6" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2061838 KT2 "potassium transporter 2" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2142110 HAK5 "high affinity K+ transporter 5" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2185515 KUP8 "potassium uptake 8" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q7XLC6	HAK11_ORYSJ	No assigned EC number	0.6173	0.9882	0.9544	yes	no
O64769	POT11_ARATH	No assigned EC number	0.6489	0.9921	0.9570	yes	no
Q8VXB1	HAK12_ORYSJ	No assigned EC number	0.6273	0.9842	0.9482	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	estExt_fgenesh4_pg.C_1270080	hypothetical protein (792 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
		Sorry, there are no predicted associations at the current settings.

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		764
PLN00150		779	PLN00150, PLN00150, potassium ion transporter fami	0.0
PLN00151		852	PLN00151, PLN00151, potassium transporter; Provisi	0.0
PLN00148		785	PLN00148, PLN00148, potassium transporter; Provisi	0.0
PLN00149		779	PLN00149, PLN00149, potassium transporter; Provisi	0.0
TIGR00794		688	TIGR00794, kup, potassium uptake protein	0.0
pfam02705		534	pfam02705, K_trans, K+ potassium transporter	0.0
COG3158		627	COG3158, Kup, K+ transporter [Inorganic ion transp	1e-138
PRK10745		622	PRK10745, trkD, potassium transport protein Kup; P	3e-91
COG0531		466	COG0531, PotE, Amino acid transporters [Amino acid	2e-06
pfam13520		425	pfam13520, AA_permease_2, Amino acid permease	0.004

>gnl\|CDD\|215078 PLN00150, PLN00150, potassium ion transporter family protein; Provisional	Back alignment and domain information

 Score =  866 bits (2238), Expect = 0.0
 Identities = 391/779 (50%), Positives = 534/779 (68%), Gaps = 36/779 (4%)

Query: 13  NKGQVWFVNHKFDHLVDEEAERHSDANVKNRLSALLLMRFAFKSLGVVYGDLGTSPMYVL 72
           N+G++W ++ +    +  +A+        +     ++M  A++SLGVVYGDLGTSP+YV 
Sbjct: 10  NQGRLWDLDQRITRPLGVDADSVRSMYFSSPNWPKVIMHLAYQSLGVVYGDLGTSPLYVF 69

Query: 73  YNTFPD-GIKDTEDVIDALSLIIYTLTIIPLIKYVLIVCRANDNGQGGTFALYSLLCRHA 131
            +TF + G+K+ +D+I ALSLIIYTLTIIPLIKYV IV RANDNG+GG+FALYSLLCR+ 
Sbjct: 70  KSTFANVGVKNNDDIIGALSLIIYTLTIIPLIKYVFIVLRANDNGEGGSFALYSLLCRYC 129

Query: 132 KLRTIPNQDRSDEELTTYSRSTFHERSHAAKTKRWLEKHSCSKIVLLVLVLVGSSMVIGD 191
            +  +PNQ  +D ELTTY        +   + +R LE     + VLL++VL+G+ MVIGD
Sbjct: 130 NISLLPNQHPTDVELTTYVVDNM---NRKTRIQRKLENSRVWQNVLLLIVLLGTCMVIGD 186

Query: 192 GILTPAIS-----------------EAVVLVAVAILVVLFSVQHFGVDKVGWLFAPIVFV 234
           GILTP+IS                   V +++  ILV+LFS+Q FG  KV +LFAPI   
Sbjct: 187 GILTPSISVLSAVVGIKAASSGLDTNLVTIISCVILVILFSLQRFGTHKVSFLFAPIFLC 246

Query: 235 WFLLIGGIGIINIWKYDSSVLKAFSPVHVYWFFR--KGHTWPSLGSIILCITGTEALFAD 292
           WF  +  IG  NI K+D SV  AF+P+++  FF       W SLG I+LC+TGTEA+FAD
Sbjct: 247 WFFSLALIGCYNIIKWDKSVFLAFNPLYIVSFFIRNGRQGWESLGGIVLCMTGTEAMFAD 306

Query: 293 VCQFPVLSIQIAFATVVYPCLLLAYIGQAAYLMKKPDHVHDVFYRSIPDIIYWPVFVVAT 352
           +  F V S+QIAF ++VYPCLLL Y+GQAAYL+K  + V+D FYRS+P  IYWP+FV+AT
Sbjct: 307 LGHFTVKSMQIAFTSLVYPCLLLTYLGQAAYLVKHMEDVNDPFYRSLPKPIYWPIFVLAT 366

Query: 353 AAAVVASQATISATFSLIKQAVALGCFPRVKVMHTSKKYSSHIYIPEINWILMILCVAVT 412
            +A++ASQA ISATFS++KQA+ALGCFPRVK++HTS K    +YIPEINWILM+LC+ +T
Sbjct: 367 CSAMIASQAMISATFSIVKQAMALGCFPRVKIVHTSNKVHGQVYIPEINWILMVLCLVIT 426

Query: 413 AGFKNQHQIGNACGFAVVIVMLVTTLIMILIMLLVWRCHWILVLIFTVLSLLVEGTYFSA 472
           AGF++  +IGNA G AVV VM++TT +M L+M+++WR H +L L+F  +  ++EG YFSA
Sbjct: 427 AGFRDTDEIGNAYGIAVVGVMIITTCLMTLVMIIIWRKHILLALLFFTVFAIIEGIYFSA 486

Query: 473 MIFKIHRGGWVPLVIAAAFFISMSVWHYGTMKRHQFELQSKVPIEWILGLGPSLGLVRVP 532
           ++FK+ +GGWVPLVIAA F   M  WHYGT KR+ +E+Q KV + W+LGLGPSLGLVRVP
Sbjct: 487 VLFKVTQGGWVPLVIAAVFGTVMYTWHYGTRKRYLYEMQHKVSVGWLLGLGPSLGLVRVP 546

Query: 533 GVGLVYSELANGVPHIFAHFITNLPAIHSVVIFVCVKYIPVYTVPEGERFLVTRVGPKSF 592
           G+GL+Y++LA+GVP +F+HFITNLPAIHS V+FVC+KY+PV TVP+ ERFL+ R+GP+++
Sbjct: 547 GIGLMYTDLAHGVPPLFSHFITNLPAIHSTVVFVCIKYLPVNTVPQDERFLIRRIGPRAY 606

Query: 593 HMFHCAARYGYKDLHKRDDEFEKNLFENLFRFMRLESLMDSC----MASEVYSPCDQGDS 648
            M+ CAARYGY DL K+DD FE+ L  +L RF+ +ES  +      MA+        G+ 
Sbjct: 607 SMYRCAARYGYTDLEKKDDNFEQLLIASLERFIEIESFREQSDLESMAASWTPEELMGEG 666

Query: 649 KDDANLPDPHKVTTTFSPNSIVSVVSPEYTVRTMSSSQMIS---QDEIDELEFLTNSRDT 705
                         T    S ++  + +   R  S    +S    D  DE+ FL   ++ 
Sbjct: 667 ------NSVGSGLFTQYDQSDINFATSQEWKRPSSQEDSVSGHSSDTQDEVAFLNKCKEA 720

Query: 706 GVVHILGKTVMMARRDSEFYKKILIDYIFTFLRKICRENNAIFYCPRECLLNVGQVIIV 764
           GVV+ILG   + AR+DS F+KK++I+YI+TFLR+I R++  +   P ECLL VG V  V
Sbjct: 721 GVVYILGNNDVKARKDSGFFKKVIINYIYTFLRRISRDSEVVLNIPHECLLKVGMVYYV 779

Length = 779

>gnl\|CDD\|215079 PLN00151, PLN00151, potassium transporter; Provisional	Back alignment and domain information

>gnl\|CDD\|215077 PLN00148, PLN00148, potassium transporter; Provisional	Back alignment and domain information

>gnl\|CDD\|177753 PLN00149, PLN00149, potassium transporter; Provisional	Back alignment and domain information

>gnl\|CDD\|129876 TIGR00794, kup, potassium uptake protein	Back alignment and domain information

>gnl\|CDD\|217193 pfam02705, K_trans, K+ potassium transporter	Back alignment and domain information

>gnl\|CDD\|225700 COG3158, Kup, K+ transporter [Inorganic ion transport and metabolism]	Back alignment and domain information

>gnl\|CDD\|182693 PRK10745, trkD, potassium transport protein Kup; Provisional	Back alignment and domain information

>gnl\|CDD\|223605 COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism]	Back alignment and domain information

>gnl\|CDD\|222193 pfam13520, AA_permease_2, Amino acid permease	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		764
PLN00151		852	potassium transporter; Provisional	100.0
PLN00150		779	potassium ion transporter family protein; Provisio	100.0
PLN00148		785	potassium transporter; Provisional	100.0
PLN00149		779	potassium transporter; Provisional	100.0
TIGR00794		688	kup potassium uptake protein. Proteins of the KUP	100.0
PRK10745		622	trkD potassium transport protein Kup; Provisional	100.0
COG3158		627	Kup K+ transporter [Inorganic ion transport and me	100.0
PF02705		534	K_trans: K+ potassium transporter; InterPro: IPR00	100.0
TIGR00911		501	2A0308 L-type amino acid transporter.	92.62
COG0531		466	PotE Amino acid transporters [Amino acid transport	82.32

>PLN00151 potassium transporter; Provisional	Back alignment and domain information

Probab=100.00  E-value=8.1e-241  Score=2037.04  Aligned_cols=746  Identities=46%  Similarity=0.831  Sum_probs=679.5

Q ss_pred             CCcceeeccccCcccchhhhccccccccc--hhhHHHHHHHHhhhcceEecccccchhhhhhccCCC-CCCCccceehhh
Q 040213           14 KGQVWFVNHKFDHLVDEEAERHSDANVKN--RLSALLLMRFAFKSLGVVYGDLGTSPMYVLYNTFPD-GIKDTEDVIDAL   90 (764)
Q Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~La~~alGVVyGDIGTSPLY~~~~~f~~-~~~~~~~vlGvl   90 (764)
                      +||||++++|+|+ ||.|+++++++++|+  +.++|.++.|||||||||||||||||||||+++|++ +.++++||+|+|
T Consensus        66 ~~~~~~~~~~~d~-~~~e~~~~~~~~~~~~~~~~~w~~l~La~qslGVVyGDIGTSPLYv~~s~F~~~~~~~~~dIlGvL  144 (852)
T PLN00151         66 RRRLIRTPPRVDS-FDVEAMEIPGAHRHDSEDLSVGRTLALAFQTLGVVFGDVGTSPLYTFSVMFSKVPIKSEEDVLGAL  144 (852)
T ss_pred             hhhHhhCCCccch-hhhcccccccccccccccccHHHHHHHHHhhhceEeCcCCCCHHHHHHHHhcCCCCCChhheeeeh
Confidence            6999999999999 999999987765433  557777799999999999999999999999999976 346999999999


Q ss_pred             HHHHHHHHHhhhheeeEEEEEecCCCCchHHHHHHHHhhccccccCCCCCCCchhhhhccccc-ccccchhhHhHHHhhh
Q 040213           91 SLIIYTLTIIPLIKYVLIVCRANDNGQGGTFALYSLLCRHAKLRTIPNQDRSDEELTTYSRST-FHERSHAAKTKRWLEK  169 (764)
Q Consensus        91 SLIfWtL~liv~iKYv~ivl~adn~GEGG~~AL~sL~~r~~~~~~~~~~~~~d~~l~~~~~~~-~~~~~~~~~~~~~le~  169 (764)
                      ||||||||||+++|||+|||||||||||||||||||+|||+|++++|||+++|+++++|+.+. +++.+++.++|++|||
T Consensus       145 SLIfWtLtLiv~iKYV~iVLrAdd~GEGGtfALySLl~R~a~~~llpnq~~~de~ls~~~~~~~~~~~~~~~~~k~~lE~  224 (852)
T PLN00151        145 SLVLYTLILIPLAKYVLVVLWANDDGEGGTFALYSLICRHAKVSLLPNQLPSDERISSFRLKLPTPELERSLKIKERLET  224 (852)
T ss_pred             HHHHHHHHHHHHHhheeEEEEecCCCCchHHHHHHHHHHhcCcCccccccchHhhhhhhcccCCccccchhHHHHHHhhh
Confidence            999999999999999999999999999999999999999999999999999999999999887 5677788899999999


Q ss_pred             ccchhHHHHHHHHHhhhhhccCccccCccc-----------------cchhhhHHHHHHHHHHhhcccccccccchhhHH
Q 040213          170 HSCSKIVLLVLVLVGSSMVIGDGILTPAIS-----------------EAVVLVAVAILVVLFSVQHFGVDKVGWLFAPIV  232 (764)
Q Consensus       170 ~~~~~~~l~~l~l~G~~l~~gDgviTPAiS-----------------~~Vv~is~~ILv~LF~~Q~~GT~kvg~~FgPIm  232 (764)
                      |+++|.+++++|++|+||+||||+||||||                 ++||||||+||++||++||+||+|||++|||||
T Consensus       225 s~~~k~~ll~l~l~GtamviGDGvlTPAISVLSAVeGL~v~~p~l~~~~VV~Is~~ILv~LF~~Q~~GT~kVg~~FgPIm  304 (852)
T PLN00151        225 SSLLKKLLLLLVLAGTSMVIGDGVLTPAMSVMSAVSGLKVGVPGFGQDAVVMISVAFLVILFSVQRFGTSKVGFAFGPAL  304 (852)
T ss_pred             hHHHHHHHHHHHHHhHHHHhcccccccchhhhhhhccccccCCcCCCCeehhHHHHHHHHHHHHHhccchhhhhhhccHH
Confidence            999999999999999999999999999999                 679999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhhcccCcceeEecCHHHHHHHHHhc--CchhhccceeeeeccchhhhccCCCCCccceeeehhhhhh
Q 040213          233 FVWFLLIGGIGIINIWKYDSSVLKAFSPVHVYWFFRKG--HTWPSLGSIILCITGTEALFADVCQFPVLSIQIAFATVVY  310 (764)
Q Consensus       233 ~vWF~~l~~~Gi~~I~~~~P~Vl~AlnP~ya~~f~~~~--~g~~~LG~V~L~iTG~EALyADmGHFg~~~Ir~aw~~~V~  310 (764)
                      ++||++|+++|+|||++|||+||+||||+|+++||.+|  .||.+||+|+||+||+|||||||||||++|||+||+++||
T Consensus       305 llWFl~i~~iGiynI~~~~p~Vl~AlnP~Y~~~Ff~~~~~~gw~~LGgVvLciTGaEALfADLGHFg~~sIqiaw~~~V~  384 (852)
T PLN00151        305 ALWFCSLGGIGIYNLVKYDSSVFRAFNPVYIYYFFKRNSTKAWSALGGCVLCATGSEAMFADLGYFSVRSIQLAFTCLVL  384 (852)
T ss_pred             HHHHHHHHHHHHHHHHhcCHHHHhhhCHHHHHHHHHhCCCceEEEecceeeeeccchhhhcccCCCCccceeeeehhhHH
Confidence            99999999999999999999999999999999999999  9999999999999999999999999999999999999999


Q ss_pred             HHHHHhhccchhhhccCCccccCcceecccCcchHHHHHHHHHHHHHHHhHHhhhhhhHHHHHHHcCCCCceeEEecCCC
Q 040213          311 PCLLLAYIGQAAYLMKKPDHVHDVFYRSIPDIIYWPVFVVATAAAVVASQATISATFSLIKQAVALGCFPRVKVMHTSKK  390 (764)
Q Consensus       311 P~L~l~Y~GQgA~Ll~~p~~~~npF~~~~P~~~~~P~~vlAtlAtIIASQA~Isg~FSi~~Qai~Lg~~Pr~~i~hTS~~  390 (764)
                      |||+|||+||||||++||++.+||||+++|+|++||+|++||+||||||||+|||+||+++||++||||||+||+|||++
T Consensus       385 P~LlL~Y~GQaA~L~~~p~~~~npFy~svP~~~~wP~~vlAtlAaIIASQA~ISgtFSii~Qai~Lg~fPRvkIvHTS~~  464 (852)
T PLN00151        385 PCLLLAYMGQAAYLMKNPDSAEQIFFSSVPSSLFWPVFLIANLAALIASRAMTTATFSCIKQSMALGCFPRLKIIHTSRK  464 (852)
T ss_pred             HHHHHHHcchHHHHhcCcccccCcHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEeCCCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCcccchhhHHHHHHHhheeEEeecCchhhhhhhhchhhhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHH
Q 040213          391 YSSHIYIPEINWILMILCVAVTAGFKNQHQIGNACGFAVVIVMLVTTLIMILIMLLVWRCHWILVLIFTVLSLLVEGTYF  470 (764)
Q Consensus       391 ~~GQIYIP~vNw~Lmi~~i~vv~~F~~s~~l~~AYGiAV~~~M~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~id~~f~  470 (764)
                      ++||||||+|||+||++|+++|++||||++||||||+||++||++||+|+++||+.+|||+++++++|+++|+++|++||
T Consensus       465 ~~GQIYIP~vNw~Lmv~~i~v~l~F~~s~~l~~AYGiAV~~vM~iTT~L~~lV~~~~W~~~~~~~~~f~~~F~~ie~~f~  544 (852)
T PLN00151        465 FMGQIYIPVINWFLLVMCLVVVCSFRSITDIGNAYGIAEVGVMMVSTILVTLVMLLIWQTNIFLVLCFPVVFLSVELVFF  544 (852)
T ss_pred             cCCceeeHHHHHHHHHHHHhheeeecCHHHHHHHhhhhhhhhhhHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhhccccCchHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCCChHHHHhcCCCCCCcccCceEEEEecCCCCcchhHH
Q 040213          471 SAMIFKIHRGGWVPLVIAAAFFISMSVWHYGTMKRHQFELQSKVPIEWILGLGPSLGLVRVPGVGLVYSELANGVPHIFA  550 (764)
Q Consensus       471 sanl~Ki~~GGW~pl~ia~~~~~iM~tW~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~avf~t~~~~~vP~~~~  550 (764)
                      |||+.||+||||+||++|++++++|++||||++++++++.++++|+++|.++.++.++.||||+|+|||++.+|+|++|.
T Consensus       545 sA~l~Ki~~GGW~Pl~la~v~~~iM~~W~yG~~~~~~~~~~~~vs~~~~~~L~~~~~~~RVpGiglf~t~~~~gvP~~f~  624 (852)
T PLN00151        545 SSVLSSVGDGGWIPLVFASVFLCIMYIWNYGSKLKYQSEVRQKLSMDLMRELGSNLGTIRAPGIGLLYNELVKGIPAIFG  624 (852)
T ss_pred             HHHHHhhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhcccCCCcccCcEEEEecCCCCCCCHHHH
Confidence            99999999999999999999999999999999999999999999999999988888888999999999999999999999


Q ss_pred             HHHhhcCccceEEEEEEEEEeeeeccCCCeEEEEEEeCCCCCCEEEEEEEeeeccCCC-CchHHHHHHHHHHHHHHhhhc
Q 040213          551 HFITNLPAIHSVVIFVCVKYIPVYTVPEGERFLVTRVGPKSFHMFHCAARYGYKDLHK-RDDEFEKNLFENLFRFMRLES  629 (764)
Q Consensus       551 h~l~~n~~lHe~vVfltV~~~~vP~V~~~eR~~v~~l~~~~~g~yRv~vrYGYmE~~~-ip~~Fe~~lv~~L~~fI~~e~  629 (764)
                      ||++|||++||++||||||++|+|+||++||+++++++++++|+|||++||||||..+ ++++||++|+++|++||++|+
T Consensus       625 h~i~~~~alHe~~Vfv~ik~~~vP~V~~~eR~lv~ri~~~~~~~yr~vvrYGY~D~~~~~~~dFe~~Lv~~l~~fi~~e~  704 (852)
T PLN00151        625 HFLTTLPAIHSTIIFVCIKYVPVPVVPQEERFLFRRVCPKDYHMFRCIARYGYKDVRKENHQAFEQLLIESLEKFIRREA  704 (852)
T ss_pred             HHHHhCCcccceEEEEEEEECcccccChhheEEEEEcCCCCCCEEEEEEEEeecccccccchHHHHHHHHHHHHHHHhhh
Confidence            9999999999999999999999999999999999999999999999999999999986 789999999999999999987


Q ss_pred             ccccccccC----------CcCCCCCCCCCCCCCCC----CCCCcccccCC--CCc-cccCCCCcccccccCcccCchhh
Q 040213          630 LMDSCMASE----------VYSPCDQGDSKDDANLP----DPHKVTTTFSP--NSI-VSVVSPEYTVRTMSSSQMISQDE  692 (764)
Q Consensus       630 ~~~~~~~~~----------~~~~~~~~~~~~~~~l~----~~~~~~~~~~~--~~~-~s~~~~~~~l~f~~~s~~~~~~v  692 (764)
                      .+..+++++          +++.....++.....+.    .+...++....  ..+ +...+..+++++    ++.++++
T Consensus       705 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~  780 (852)
T PLN00151        705 QERALESDGNDDTDDEDSVTSSRVLIAPNGSVYSLGVPLLADYRLTSKPIPEASTSEEVSPVLPSSSMS----SDEDQSL  780 (852)
T ss_pred             hhccccccccccccccccccccccccCCCcccccccccccccccccccccccccccccccccccccccc----cccCccH
Confidence            532211111          01111100000000000    00000000000  000 000000011222    2335689


Q ss_pred             HHHHHHHhhhhcCCcEEEEeecEEEecCCChhhHHHHHHHHHHHHhhhccccccccccCCCCeEEeeeEEEC
Q 040213          693 IDELEFLTNSRDTGVVHILGKTVMMARRDSEFYKKILIDYIFTFLRKICRENNAIFYCPRECLLNVGQVIIV  764 (764)
Q Consensus       693 ~~El~~L~~A~e~gvvY~LGr~~V~a~~~S~~~kk~~in~lF~FLrrN~R~~~~~l~IP~~rvVEVGm~yeI  764 (764)
                      +||+++|++|+|+|++|++||++|+|+++|+|+||+++|++|+|||||||++...|+|||+|++||||+|+|
T Consensus       781 ~~El~~l~~a~e~Gv~yilG~~~v~a~~~S~~~Kk~~in~~Y~fLRkN~R~~~~~L~iP~~~lleVGm~Y~v  852 (852)
T PLN00151        781 EYELSFIREAKESGVVYLLGHGDVRARKNSWFIKKLVINYFYAFLRKNCRRGIANLSVPHSNIMQVGMTYMV  852 (852)
T ss_pred             HHHHHHHHHHHHcCcEEEeccceEEEcCCCcHHHHHHHHHHHHHHHHhccCcccccCCChHHeEEeceEEEC
Confidence            999999999999999999999999999999999999999999999999999999999999999999999997

>PLN00150 potassium ion transporter family protein; Provisional	Back alignment and domain information

>PLN00148 potassium transporter; Provisional	Back alignment and domain information

>PLN00149 potassium transporter; Provisional	Back alignment and domain information

>TIGR00794 kup potassium uptake protein	Back alignment and domain information

>PRK10745 trkD potassium transport protein Kup; Provisional	Back alignment and domain information

>COG3158 Kup K+ transporter [Inorganic ion transport and metabolism]	Back alignment and domain information

>PF02705 K_trans: K+ potassium transporter; InterPro: IPR003855 This is a family of K+ potassium transporters that are conserved across phyla, having both bacterial (KUP) [], yeast (HAK) [], and plant (AtKT) [] sequences as members	Back alignment and domain information

>TIGR00911 2A0308 L-type amino acid transporter	Back alignment and domain information

>COG0531 PotE Amino acid transporters [Amino acid transport and metabolism]	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		764
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

 Score = 43.3 bits (101), Expect = 3e-04
 Identities = 59/466 (12%), Positives = 112/466 (24%), Gaps = 158/466 (33%)

Query: 33  ERHSDANVKNRLSALLLMRFAFKSLG-----VVYGDLGT--SPMYVLYNTFPDGIKDTED 85
           +  +  NV +RL   L +R A   L      ++ G LG+  +    +     D       
Sbjct: 124 QVFAKYNV-SRLQPYLKLRQALLELRPAKNVLIDGVLGSGKT---WVAL---DVCLS-YK 175

Query: 86  VIDALSLIIYTLTIIPLIKYVLIVCRANDNGQGGTFALYSLLCRHAKLRTIPNQDRSD-- 143
           V   +   I+ L +             N N       +   L            D S   
Sbjct: 176 VQCKMDFKIFWLNL------------KNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNI 223

Query: 144 ----EELTTYSRSTFHERSHAAKTKRWLEKHSCSKIVLLVLVLVGSSMVIGDGILTPAIS 199
                 +    R     + +              +  LLVL            +      
Sbjct: 224 KLRIHSIQAELRRLLKSKPY--------------ENCLLVL----------LNVQNAKAW 259

Query: 200 EAV-----VLV-----AVAILVVLFSVQHFGVDKVGWLFAP-----IVFVWF-------- 236
            A      +L+      V   +   +  H  +D       P     ++  +         
Sbjct: 260 NAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLP 319

Query: 237 --------LLIGGIG-----IINIWKY-------------DSSVLKAFSPV---HVYW-- 265
                     +  I       +  W               +SS L    P     ++   
Sbjct: 320 REVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESS-LNVLEPAEYRKMFDRL 378

Query: 266 -FFRKGHTWPSLGSIILCITGTEALFADV-------CQFPVLSIQIAFATVVYPCLLLAY 317
             F      P   +I+L +   + + +DV        ++ ++  Q   +T+  P + L  
Sbjct: 379 SVFPPSAHIP---TILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLEL 435

Query: 318 IGQA------------AYLMKKPDHVHDVFYRSIPDIIYWPVFVVATAAAVVASQATISA 365
             +              Y + K     D+    +    Y    +                
Sbjct: 436 KVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYS--HIGHHLKN--IEHPERMT 491

Query: 366 TFSLIKQAVALGCFPRVKVMHTS----------------KKYSSHI 395
            F ++        F   K+ H S                K Y  +I
Sbjct: 492 LFRMVFLDFR---FLEQKIRHDSTAWNASGSILNTLQQLKFYKPYI 534

PyMOL of 1vt4

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		764
3gia_A		444	Uncharacterized protein MJ0609; membrane protein,	95.47
4djk_A		511	Probable glutamate/gamma-aminobutyrate antiporter;	95.21
3l1l_A		445	Arginine/agmatine antiporter; TCDB 2.A.3.2.5, ADIC	92.68

>3gia_A Uncharacterized protein MJ0609; membrane protein, transporter, cell membrane, membrane, transmembrane, transport protein; HET: D10 BCN; 2.32A {Methanocaldococcus jannaschii} PDB: 3gi9_C* 3gi8_C	Back alignment and structure

Probab=95.47  E-value=0.063  Score=57.95  Aligned_cols=79  Identities=18%  Similarity=0.286  Sum_probs=43.5

Q ss_pred             hhhhHHHHHHHHHHhhccccccccc---chhhHHHHHHHHHHHHHHHhhcccCcceeEe-cCHHHHHHHHHhcCchhhcc
Q 040213          202 VVLVAVAILVVLFSVQHFGVDKVGW---LFAPIVFVWFLLIGGIGIINIWKYDSSVLKA-FSPVHVYWFFRKGHTWPSLG  277 (764)
Q Consensus       202 Vv~is~~ILv~LF~~Q~~GT~kvg~---~FgPIm~vWF~~l~~~Gi~~I~~~~P~Vl~A-lnP~ya~~f~~~~~g~~~LG  277 (764)
                      ...+++++++++..+.-+|....++   .+..+.++=++.+.+.|+...   +|+-+.. ++|.-...+      +..+.
T Consensus       125 ~~~~~~~~~~~~~~in~~g~~~~~~~~~~~~~~~i~~~~~~ii~~~~~~---~~~~~~~~~~~~g~~~~------~~~~~  195 (444)
T 3gia_A          125 IAITEIGIVAFFTALNFFGSKAVGRAEFFIVLVKLLILGLFIFAGLITI---HPSYVIPDLAPSAVSGM------IFASA  195 (444)
T ss_dssp             HHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---CGGGTSCCCSHHHHHHH------HHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc---ChhhcCCCCCCcchHHH------HHHHH
Confidence            3456778888888888889876654   444544444444455555443   3443322 333211111      12333


Q ss_pred             ceeeeeccchhh
Q 040213          278 SIILCITGTEAL  289 (764)
Q Consensus       278 ~V~L~iTG~EAL  289 (764)
                      ..+.+.+|-|+.
T Consensus       196 ~~~~a~~G~e~~  207 (444)
T 3gia_A          196 IFFLSYMGFGVI  207 (444)
T ss_dssp             HGGGGGTHHHHH
T ss_pred             HHHHHHHhHHHH
Confidence            456788888875

PyMOL of 3gia

>4djk_A Probable glutamate/gamma-aminobutyrate antiporter; LEUT, glutamate-GABA antiporter, transport protein; 3.10A {Escherichia coli} PDB: 4dji_A	Back alignment and structure

>3l1l_A Arginine/agmatine antiporter; TCDB 2.A.3.2.5, ADIC, Arg-bound, amino-acid transport, cell inner membrane, cell membrane, membrane; HET: ARG BNG; 3.00A {Escherichia coli} PDB: 3h5m_A* 3h6b_A 3lrb_A 3lrc_A 3ob6_A* 3hqk_A 3ncy_A	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00