Citrus Sinensis ID: 040291

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160
Protein Sequence
MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIPDGMEPWEDRNDFGKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAWSMEVAKKMNVRGALFWPSSAASVALLFHIPKLIDDGIIDSN
Secondary Structure (PSIPRED)
ccccEEEEEcccccccHHHHHHHHHHHHHcccEEEEEEccccHHHHHHHHcccccccccEEEEEcccccccccccccHHHHHHHHHHHcHHHHHHHHHHHHccccccccEEEEccccccHHHHHHHccccEEEEccHHHHHHHHHHcHHHHHHccccccc
Secondary Structure Prediction (SSPRO)
ccccEEEEEEccccccHHHHHHHHHHHHHcccEEEEEEccccHHHHHHHcccccccccccEEEEcccccccccccccHHHHHHHHHHHccHHHHHHHHHHHccccccEEEEEEccHHHHHHHHHHHccccEEEEccHHHHHHHHHHHHHHHHHccccccc
Coil and Loop (DISEMBL)
mnrphvlvlpipaqghvipllefsqclakqgfrvtfvntdyDHKRIMEslegkndlgeqirlvsipdgmepwedrnDFGKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAWSMEVAKKMNVRgalfwpssAASVALLFHIpkliddgiidsn
Flexible Loop (DISEMBL)
MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMeslegkndlgeqIRLVSIPDGMEPWEDRNDFGKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAWSMEVAKKMNVRGALFWPSSAASVALLFHIPkliddgiidsn
Low Complexity Region (SEG)
MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIPDGMEPWEDRNDFGKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAWSMEVAKKMNVRGALFWPSSAASVALLFHIPKLIDDGIIDSN
Disordered region (IsUnstruct)
*****VLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIPDGMEPWEDRNDFGKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAWSMEVAKKMNVRGALFWPSSAASVALLFHIPKLIDDGII***
Disordered Region (DISOPRED)
MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHK***************IRLVSIPDGMEPWEDRNDFGKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAWSMEVAKKMNVRGALFWPSSAASVALLFHIPKLIDDGII***
Disordered Region (DISEMBL)
MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIPDGMEPWEDRNDFGKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAWSMEVAKKMNVRGALFWPSSAASVALLFHIPKLIDDGIIDSN
Disordered Region (DISPRO)
*NRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIPDGMEPWEDRNDFGKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAWSMEVAKKMNVRGALFWPSSAASVALLFHIPKLIDDGIID**
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIPDGMEPWEDRNDFGKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAWSMEVAKKMNVRGALFWPSSAASVALLFHIPKLIDDGIIDSN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	160	2.2.26 [Sep-21-2011]
Q9SGA8	464	UDP-glycosyltransferase 8	yes	no	1.0	0.344	0.512	4e-40
Q9M9E7	489	UDP-glycosyltransferase 8	no	no	0.962	0.314	0.364	2e-24
Q9LMF0	479	UDP-glycosyltransferase 8	no	no	0.95	0.317	0.356	2e-23
Q9SJL0	490	UDP-glycosyltransferase 8	no	no	0.943	0.308	0.333	6e-22
Q9ZWJ3	481	UDP-glycosyltransferase 8	no	no	0.956	0.318	0.335	8e-21
Q9SK82	489	UDP-glycosyltransferase 8	no	no	0.956	0.312	0.335	3e-20
Q9LME8	487	UDP-glycosyltransferase 8	no	no	0.956	0.314	0.333	1e-19
Q9LMF1	488	UDP-glycosyltransferase 8	no	no	0.956	0.313	0.333	2e-19
Q9ZUV0	482	UDP-glycosyltransferase 8	no	no	0.868	0.288	0.312	2e-14
Q9SBL1	492	Cyanohydrin beta-glucosyl	N/A	no	0.956	0.310	0.262	5e-13

>sp|Q9SGA8|U83A1_ARATH UDP-glycosyltransferase 83A1 OS=Arabidopsis thaliana GN=UGT83A1 PE=2 SV=1

 Score =  163 bits (413), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 85/166 (51%), Positives = 118/166 (71%), Gaps = 6/166 (3%)

Query: 1   MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEG---KNDLG 57
           M RPHV+V+P PAQGHV+PL+ FS+ LAKQG ++TF+NT+++H RI+ SL     ++ +G
Sbjct: 9   MGRPHVVVIPYPAQGHVLPLISFSRYLAKQGIQITFINTEFNHNRIISSLPNSPHEDYVG 68

Query: 58  EQIRLVSIPDGME-PWEDRNDFGKLFEKVLQVMPGKLEELIEDINSREDEK--LDCFIAD 114
           +QI LVSIPDG+E   E+RN  GKL E VL+ MP K+EELIE + +       + C +AD
Sbjct: 69  DQINLVSIPDGLEDSPEERNIPGKLSESVLRFMPKKVEELIERMMAETSGGTIISCVVAD 128

Query: 115 GYMAWSMEVAKKMNVRGALFWPSSAASVALLFHIPKLIDDGIIDSN 160
             + W++EVA K  +R   F P++AAS+ L F I KLIDDG+IDS+
Sbjct: 129 QSLGWAIEVAAKFGIRRTAFCPAAAASMVLGFSIQKLIDDGLIDSD 174

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: -

>sp|Q9M9E7|U85A4_ARATH UDP-glycosyltransferase 85A4 OS=Arabidopsis thaliana GN=UGT85A4 PE=2 SV=1

 Score =  111 bits (277), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 59/162 (36%), Positives = 96/162 (59%), Gaps = 8/162 (4%)

Query: 2   NRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLG--EQ 59
            +PH + +P PAQGH+ P+L+ ++ L  +GF VTFVNTDY+H+RI++S  G + L     
Sbjct: 10  QKPHAMCIPYPAQGHINPMLKLAKLLHARGFHVTFVNTDYNHRRILQS-RGPHALNGLPS 68

Query: 60  IRLVSIPDGMEPWED---RNDFGKLFEKVLQVMPGKLEELIEDINSRED-EKLDCFIADG 115
            R  +IPDG+ PW D   + D  KL +  +       ++LI  +NS  D   + C I+D 
Sbjct: 69  FRFETIPDGL-PWTDVDAKQDMLKLIDSTINNCLAPFKDLILRLNSGSDIPPVSCIISDA 127

Query: 116 YMAWSMEVAKKMNVRGALFWPSSAASVALLFHIPKLIDDGII 157
            M+++++ A+++ +   L W +SA ++ L  H  KLI+  II
Sbjct: 128 SMSFTIDAAEELKIPVVLLWTNSATALILYLHYQKLIEKEII 169

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q9LMF0|U85A5_ARATH UDP-glycosyltransferase 85A5 OS=Arabidopsis thaliana GN=UGT85A5 PE=2 SV=1

 Score =  107 bits (268), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 57/160 (35%), Positives = 94/160 (58%), Gaps = 8/160 (5%)

Query: 3   RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLG--EQI 60
           +PHV+ +P PAQGH+ P+L+ ++ L  +GF VTFVNT+Y+H R++ S  G N L      
Sbjct: 11  KPHVVCIPFPAQGHINPMLKVAKLLYARGFHVTFVNTNYNHNRLIRS-RGPNSLDGLPSF 69

Query: 61  RLVSIPDGMEPWEDRN---DFGKLFEKVLQVMPGKLEELIEDINSRED-EKLDCFIADGY 116
           R  SIPDG+ P E+++   D   L E  ++      +EL+  IN+ +D   + C ++DG 
Sbjct: 70  RFESIPDGL-PEENKDVMQDVPTLCESTMKNCLAPFKELLRRINTTKDVPPVSCIVSDGV 128

Query: 117 MAWSMEVAKKMNVRGALFWPSSAASVALLFHIPKLIDDGI 156
           M+++++ A+++ V   LFW  SA       H  + I+ G+
Sbjct: 129 MSFTLDAAEELGVPDVLFWTPSACGFLAYLHFYRFIEKGL 168

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q9SJL0|U86A1_ARATH UDP-glycosyltransferase 86A1 OS=Arabidopsis thaliana GN=UGT86A1 PE=2 SV=1

 Score =  103 bits (256), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 55/165 (33%), Positives = 86/165 (52%), Gaps = 14/165 (8%)

Query: 3   RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGE---- 58
           +PH++++P P QGHVIP +  +  LA  GF +TFVNTD  H  I  S   ++D G+    
Sbjct: 8   KPHIMMIPYPLQGHVIPFVHLAIKLASHGFTITFVNTDSIHHHI--STAHQDDAGDIFSA 65

Query: 59  -------QIRLVSIPDGMEPWEDRN-DFGKLFEKVLQVMPGKLEELIEDINSREDEKLDC 110
                   IR  ++ DG     DR+ +  + FE +L V    +++LI  ++ R+D  + C
Sbjct: 66  ARSSGQHDIRYTTVSDGFPLDFDRSLNHDQFFEGILHVFSAHVDDLIAKLSRRDDPPVTC 125

Query: 111 FIADGYMAWSMEVAKKMNVRGALFWPSSAASVALLFHIPKLIDDG 155
            IAD +  WS  +  K N+    FW   A  + L +H+  LI +G
Sbjct: 126 LIADTFYVWSSMICDKHNLVNVSFWTEPALVLNLYYHMDLLISNG 170

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q9ZWJ3|U85A2_ARATH UDP-glycosyltransferase 85A2 OS=Arabidopsis thaliana GN=UGT85A2 PE=2 SV=1

 Score = 99.4 bits (246), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 54/161 (33%), Positives = 91/161 (56%), Gaps = 8/161 (4%)

Query: 2   NRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKN--DLGEQ 59
            + HV+ +P PAQGH+ P+++ ++ L  +GF +TFVNT Y+H R++ S  G N  D    
Sbjct: 7   QKQHVVCVPYPAQGHINPMMKVAKLLYAKGFHITFVNTVYNHNRLLRS-RGPNAVDGLPS 65

Query: 60  IRLVSIPDGMEPWED---RNDFGKLFEKVLQVMPGKLEELIEDINSRED-EKLDCFIADG 115
            R  SIPDG+ P  D     D   L E  ++      +EL+  IN+R+D   + C ++DG
Sbjct: 66  FRFESIPDGL-PETDVDVTQDIPTLCESTMKHCLAPFKELLRQINARDDVPPVSCIVSDG 124

Query: 116 YMAWSMEVAKKMNVRGALFWPSSAASVALLFHIPKLIDDGI 156
            M+++++ A+++ V   LFW +SA       +  + I+ G+
Sbjct: 125 CMSFTLDAAEELGVPEVLFWTTSACGFLAYLYYYRFIEKGL 165

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q9SK82|U85A1_ARATH UDP-glycosyltransferase 85A1 OS=Arabidopsis thaliana GN=UGT85A1 PE=1 SV=1

 Score = 97.4 bits (241), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 54/161 (33%), Positives = 88/161 (54%), Gaps = 8/161 (4%)

Query: 2   NRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLG--EQ 59
            +PHV+ +P PAQGH+ P++  ++ L  +GF VTFVNT Y+H R + S  G N L     
Sbjct: 10  QKPHVVCVPYPAQGHINPMMRVAKLLHARGFYVTFVNTVYNHNRFLRS-RGSNALDGLPS 68

Query: 60  IRLVSIPDGMEPWED---RNDFGKLFEKVLQVMPGKLEELIEDINSRED-EKLDCFIADG 115
            R  SI DG+ P  D     D   L E  ++       EL++ IN+ ++   + C ++DG
Sbjct: 69  FRFESIADGL-PETDMDATQDITALCESTMKNCLAPFRELLQRINAGDNVPPVSCIVSDG 127

Query: 116 YMAWSMEVAKKMNVRGALFWPSSAASVALLFHIPKLIDDGI 156
            M+++++VA+++ V   LFW +S  +     H    I+ G+
Sbjct: 128 CMSFTLDVAEELGVPEVLFWTTSGCAFLAYLHFYLFIEKGL 168

Involved in the O-glucosylation of trans-zeatin and dihydrozeatin. Also active in vitro on cis-zeatin. Not active on N-glucosylated substrates.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q9LME8|U85A7_ARATH UDP-glycosyltransferase 85A7 OS=Arabidopsis thaliana GN=UGT85A7 PE=2 SV=1

 Score = 95.5 bits (236), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 53/159 (33%), Positives = 90/159 (56%), Gaps = 6/159 (3%)

Query: 3   RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLG--EQI 60
           +PHV+ +P PAQGH+ P+L+ ++ L  +GF VTFVNT Y+H R++ S  G N L      
Sbjct: 11  KPHVVCVPYPAQGHINPMLKVAKLLYAKGFHVTFVNTLYNHNRLLRS-RGPNALDGFPSF 69

Query: 61  RLVSIPDGM-EPWEDRNDFG-KLFEKVLQVMPGKLEELIEDINSRED-EKLDCFIADGYM 117
           R  SIPDG+ E   DR      +   + +      +E++  IN ++D   + C ++DG M
Sbjct: 70  RFESIPDGLPETDGDRTQHTPTVCMSIEKNCLAPFKEILRRINDKDDVPPVSCIVSDGVM 129

Query: 118 AWSMEVAKKMNVRGALFWPSSAASVALLFHIPKLIDDGI 156
           +++++ A+++ V   +FW +SA     + H    I+ G+
Sbjct: 130 SFTLDAAEELGVPEVIFWTNSACGFMTILHFYLFIEKGL 168

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q9LMF1|U85A3_ARATH UDP-glycosyltransferase 85A3 OS=Arabidopsis thaliana GN=UGT85A3 PE=2 SV=2

 Score = 95.1 bits (235), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 53/159 (33%), Positives = 89/159 (55%), Gaps = 6/159 (3%)

Query: 3   RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLG--EQI 60
           +PHV+ +P PAQGH+ P+++ ++ L  +GF VTFVNT Y+H R++ S  G N L      
Sbjct: 11  KPHVVCVPYPAQGHINPMMKVAKLLHVKGFHVTFVNTVYNHNRLLRS-RGANALDGLPSF 69

Query: 61  RLVSIPDGMEPW--EDRNDFGKLFEKVLQVMPGKLEELIEDINSRED-EKLDCFIADGYM 117
           +  SIPDG+     +   D   L E   +      ++L++ I +RED   + C ++DG M
Sbjct: 70  QFESIPDGLPETGVDATQDIPALSESTTKNCLVPFKKLLQRIVTREDVPPVSCIVSDGSM 129

Query: 118 AWSMEVAKKMNVRGALFWPSSAASVALLFHIPKLIDDGI 156
           +++++VA+++ V    FW +SA       H    I+ G+
Sbjct: 130 SFTLDVAEELGVPEIHFWTTSACGFMAYLHFYLFIEKGL 168

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q9ZUV0|U86A2_ARATH UDP-glycosyltransferase 86A2 OS=Arabidopsis thaliana GN=UGT86A2 PE=2 SV=1

 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 46/147 (31%), Positives = 73/147 (49%), Gaps = 8/147 (5%)

Query: 9   LPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEG------KNDLGEQIRL 62
           +P P QGHV P +  +  LA QG  VTFVNT Y H +I    +G      +++ G  IR 
Sbjct: 22  IPYPFQGHVNPFVHLAIKLASQGITVTFVNTHYIHHQITNGSDGDIFAGVRSESGLDIRY 81

Query: 63  VSIPDGMEPWEDRNDFGKLFE-KVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAWSM 121
            ++ DG+    DR+     ++  +L V    +EEL+  +    D  ++  IAD +  W  
Sbjct: 82  ATVSDGLPVGFDRSLNHDTYQSSLLHVFYAHVEELVASLVGG-DGGVNVMIADTFFVWPS 140

Query: 122 EVAKKMNVRGALFWPSSAASVALLFHI 148
            VA+K  +    FW  +A   +L +H+
Sbjct: 141 VVARKFGLVCVSFWTEAALVFSLYYHM 167

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: -

>sp|Q9SBL1|HMNGT_SORBI Cyanohydrin beta-glucosyltransferase OS=Sorghum bicolor GN=UGT85B1 PE=1 SV=1

 Score = 73.6 bits (179), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 43/164 (26%), Positives = 86/164 (52%), Gaps = 11/164 (6%)

Query: 4   PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDL------G 57
           PHV+++P P QGHV PL++ ++ L  +G RVTFV T Y+++R++ + +G+  +       
Sbjct: 11  PHVVLVPFPGQGHVAPLMQLARLLHARGARVTFVYTQYNYRRLLRA-KGEAAVRPPATSS 69

Query: 58  EQIRLVSIPDGMEPWEDRNDFGKLFEKV----LQVMPGKLEELIEDINSREDEKLDCFIA 113
            + R+  I DG+     +ND G L + +    L      L  L +++  ++   + C + 
Sbjct: 70  ARFRIEVIDDGLSLSVPQNDVGGLVDSLRKNCLHPFRALLRRLGQEVEGQDAPPVTCVVG 129

Query: 114 DGYMAWSMEVAKKMNVRGALFWPSSAASVALLFHIPKLIDDGII 157
           D  M ++   A++  +    F+ +SA  +    H  +L++ G++
Sbjct: 130 DVVMTFAAAAAREAGIPEVQFFTASACGLLGYLHYGELVERGLV 173

Involved in the biosynthesis of the cyanogenic glucoside dhurrin. Prevents the disocciation and release of toxic hydrogen cyanide. Mandelonitrile, p-hydroxymandelonitrile, benzyl alcohol, benzoic acid and geraniol, but not hydroquinone(1,4-benzenediol), alpha-terpinol, linalool or farnesol are utilized as acceptor substrates. UDP-glucose, but not UDP-xylose or UDP-glucuronic acid can be used as sugar donor.

Sorghum bicolor (taxid: 4558)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 8

EC: 5

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	160
255570294	452	UDP-glucuronosyltransferase, putative [R	0.993	0.351	0.625	8e-54
225451709	454	PREDICTED: UDP-glycosyltransferase 83A1	1.0	0.352	0.593	9e-53
224141477	454	predicted protein [Populus trichocarpa]	1.0	0.352	0.568	5e-52
224080163	454	predicted protein [Populus trichocarpa]	1.0	0.352	0.562	2e-51
359488535	451	PREDICTED: LOW QUALITY PROTEIN: UDP-glyc	1.0	0.354	0.581	4e-51
225451707	454	PREDICTED: UDP-glycosyltransferase 83A1	0.975	0.343	0.617	2e-46
397789312	162	putative UDP-glucosyltransferase 83A, pa	0.981	0.969	0.531	5e-46
296082221	494	unnamed protein product [Vitis vinifera]	0.943	0.305	0.569	9e-46
225451705	454	PREDICTED: UDP-glycosyltransferase 83A1	0.943	0.332	0.569	1e-45
147767625	568	hypothetical protein VITISV_004920 [Viti	0.943	0.265	0.569	1e-45

>gi|255570294|ref|XP_002526107.1| UDP-glucuronosyltransferase, putative [Ricinus communis] gi|223534604|gb|EEF36301.1| UDP-glucuronosyltransferase, putative [Ricinus communis]

 Score =  214 bits (546), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 100/160 (62%), Positives = 125/160 (78%), Gaps = 1/160 (0%)

Query: 1   MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQI 60
           M + HVL +P PAQGHVIP+LE SQCL K GF +TFVNTDY+HKR++ +L G + LG+QI
Sbjct: 1   MGKLHVLAIPYPAQGHVIPMLELSQCLVKHGFEITFVNTDYNHKRVLNAL-GNDFLGDQI 59

Query: 61  RLVSIPDGMEPWEDRNDFGKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAWS 120
            LVSIPDG+E WEDRND GKL E +  VMPGKLEELI   N+ +D+K+ C IAD    W+
Sbjct: 60  SLVSIPDGLELWEDRNDLGKLTEAIFNVMPGKLEELINRSNASKDKKITCIIADANNGWA 119

Query: 121 MEVAKKMNVRGALFWPSSAASVALLFHIPKLIDDGIIDSN 160
           +EVA+KMN+R A FWP+SAA ++ LF + KLIDDGIID+N
Sbjct: 120 LEVAEKMNIRCAAFWPASAALLSSLFTVQKLIDDGIIDNN 159

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225451709|ref|XP_002276804.1| PREDICTED: UDP-glycosyltransferase 83A1 [Vitis vinifera]

 Score =  211 bits (537), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 95/160 (59%), Positives = 125/160 (78%)

Query: 1   MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQI 60
           M  PH+LV+P PAQGHVIPLLE SQ L K GF++TFVNT+++HKR+  +L  K+D+G+ I
Sbjct: 1   MGNPHILVIPYPAQGHVIPLLELSQHLVKHGFKITFVNTEFNHKRVTNALTKKDDVGDHI 60

Query: 61  RLVSIPDGMEPWEDRNDFGKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAWS 120
            LVSIPDG+E WEDRND GKL E   ++MP KLEELIE+IN  +D+ + C IAD  M W+
Sbjct: 61  HLVSIPDGLEAWEDRNDLGKLTEVGFRIMPKKLEELIEEINGSDDDNITCVIADESMGWA 120

Query: 121 MEVAKKMNVRGALFWPSSAASVALLFHIPKLIDDGIIDSN 160
           +EVA+KM ++ A+FWP+SA  +AL F + KLIDDGI+D+N
Sbjct: 121 LEVAEKMGIQRAVFWPASATLLALFFSVQKLIDDGIVDNN 160

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224141477|ref|XP_002324098.1| predicted protein [Populus trichocarpa] gi|222867100|gb|EEF04231.1| predicted protein [Populus trichocarpa]

 Score =  208 bits (530), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 91/160 (56%), Positives = 125/160 (78%)

Query: 1   MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQI 60
           M  PH++V+P PAQGHVIP +E SQCLAKQGF++TFVNT+Y+HKR++++L   N LG +I
Sbjct: 1   MGNPHIVVIPYPAQGHVIPFMELSQCLAKQGFKITFVNTEYNHKRVLKALGENNYLGSEI 60

Query: 61  RLVSIPDGMEPWEDRNDFGKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAWS 120
            LVSIPDG+EPWEDRN+ GKL + + QVMPGKL++LI  IN   +E++   I D  M W+
Sbjct: 61  SLVSIPDGLEPWEDRNELGKLTKAIFQVMPGKLQQLINRINMSGEERITGIITDWSMGWA 120

Query: 121 MEVAKKMNVRGALFWPSSAASVALLFHIPKLIDDGIIDSN 160
           +EVA+KMN+R A+FWP+S A +  +  I KL++DGIID++
Sbjct: 121 LEVAEKMNIRRAIFWPASTAVLCSMLSISKLLNDGIIDND 160

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224080163|ref|XP_002306038.1| predicted protein [Populus trichocarpa] gi|222849002|gb|EEE86549.1| predicted protein [Populus trichocarpa]

 Score =  206 bits (525), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 90/160 (56%), Positives = 125/160 (78%)

Query: 1   MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQI 60
           M +PH++V+P PAQGHVIP +E SQCL KQGF++TFV+T+Y+HKR++++L G  +LG +I
Sbjct: 1   MGKPHIVVIPYPAQGHVIPFMELSQCLVKQGFKITFVSTEYNHKRVLKALRGNINLGGEI 60

Query: 61  RLVSIPDGMEPWEDRNDFGKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAWS 120
            LVS+PDG+E   DRN+ GKL + + QVMPGKLEELI+ IN  E+EK+ C I D  M W+
Sbjct: 61  SLVSLPDGLEACGDRNELGKLSKAIFQVMPGKLEELIDRINMTEEEKITCIITDWSMGWA 120

Query: 121 MEVAKKMNVRGALFWPSSAASVALLFHIPKLIDDGIIDSN 160
           +EVA+KM +R A++WP++AA +  L  IPKL+ DGIID +
Sbjct: 121 LEVAEKMKIRRAIYWPAAAAILCSLISIPKLLSDGIIDGD 160

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359488535|ref|XP_003633773.1| PREDICTED: LOW QUALITY PROTEIN: UDP-glycosyltransferase 83A1-like [Vitis vinifera]

 Score =  205 bits (522), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 93/160 (58%), Positives = 127/160 (79%)

Query: 1   MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQI 60
           M   HVLV+P PAQGHVIP +E SQ L K GF+VTFVNTD+  +RI++S  GK+++G+QI
Sbjct: 1   MGSLHVLVMPFPAQGHVIPFMELSQNLVKHGFKVTFVNTDFSQERIVKSFTGKDNVGDQI 60

Query: 61  RLVSIPDGMEPWEDRNDFGKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAWS 120
           RLVSIPDG+E WEDRND GK  E +++VMP KLEEL+++IN R+D K+ C IADG M W+
Sbjct: 61  RLVSIPDGLEAWEDRNDMGKSCEGIVRVMPKKLEELMQEINGRDDNKITCVIADGNMGWA 120

Query: 121 MEVAKKMNVRGALFWPSSAASVALLFHIPKLIDDGIIDSN 160
           +EVA+KM ++ A+F P++AA + L + + KLIDDGI+D++
Sbjct: 121 LEVAEKMGIKRAVFLPAAAAMMVLAYRMQKLIDDGIVDND 160

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225451707|ref|XP_002279299.1| PREDICTED: UDP-glycosyltransferase 83A1 [Vitis vinifera]

 Score =  189 bits (481), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 97/157 (61%), Positives = 128/157 (81%), Gaps = 1/157 (0%)

Query: 3   RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRL 62
           +PHVL LP PAQGHVIPL+E SQ L K GF+VTFVN+D++HKR++ +L  K+D+G QIRL
Sbjct: 4   KPHVLALPYPAQGHVIPLIELSQWLVKLGFKVTFVNSDFNHKRVVNALSAKDDIGGQIRL 63

Query: 63  VSIPDGMEPWEDRNDFGKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAWSME 122
           VSIPDG+E WEDRND GKL + +L+VMPGKLEELIE+IN  +DE + C IADG + W+M 
Sbjct: 64  VSIPDGLEAWEDRNDLGKLTKAILRVMPGKLEELIEEINGSDDE-ITCVIADGNLGWAMG 122

Query: 123 VAKKMNVRGALFWPSSAASVALLFHIPKLIDDGIIDS 159
           VA+KM ++ A FWP++AA +AL+F + KL+DDGI+ +
Sbjct: 123 VAEKMGIKRAAFWPAAAALLALIFSVRKLVDDGILTN 159

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|397789312|gb|AFO67245.1| putative UDP-glucosyltransferase 83A, partial [Aralia elata]

 Score =  189 bits (479), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 84/158 (53%), Positives = 121/158 (76%), Gaps = 1/158 (0%)

Query: 4   PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESL-EGKNDLGEQIRL 62
           PH L +P PAQGHVIPL+E  Q   K+GF+VTFVNTD++HKR+M +L E   ++G+ I +
Sbjct: 4   PHALAVPFPAQGHVIPLMELVQHFVKKGFKVTFVNTDFNHKRVMNALLEKDRNVGDMIHM 63

Query: 63  VSIPDGMEPWEDRNDFGKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAWSME 122
           VS+PDG +P EDRND GKL + + +VMP KLE+LI++IN+ ++ K+ C +AD  M W+++
Sbjct: 64  VSLPDGFDPGEDRNDMGKLSKAISRVMPQKLEKLIKNINATDNNKITCLVADENMGWALK 123

Query: 123 VAKKMNVRGALFWPSSAASVALLFHIPKLIDDGIIDSN 160
           VA+KM +R   FWP+SAA +  +F IPKLI+DGII+++
Sbjct: 124 VAEKMGIRRVAFWPASAAQLGSIFSIPKLIEDGIINND 161

Source: Aralia elata

Species: Aralia elata

Genus: Aralia

Family: Araliaceae

Order: Apiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296082221|emb|CBI21226.3| unnamed protein product [Vitis vinifera]

 Score =  187 bits (476), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 86/151 (56%), Positives = 114/151 (75%)

Query: 1   MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQI 60
           M   HVL +P  AQGHVIPL+E SQ L   GF+VTFVNTD+  +RI++S  GK+D+ +QI
Sbjct: 1   MGSLHVLAIPYAAQGHVIPLMELSQNLVMHGFKVTFVNTDFSQERIVKSFAGKDDVRDQI 60

Query: 61  RLVSIPDGMEPWEDRNDFGKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAWS 120
           RLVSIPDG+E WEDRND GK  E +L+VMP KLEELI++IN  +D ++ C IADG+M W+
Sbjct: 61  RLVSIPDGLEAWEDRNDLGKACEGILRVMPKKLEELIQEINRTDDHEIACVIADGHMGWA 120

Query: 121 MEVAKKMNVRGALFWPSSAASVALLFHIPKL 151
           +EVA+K+ ++ A FWPS+AA + L F +  L
Sbjct: 121 LEVAEKLGIKRAAFWPSAAAMMVLTFRMQNL 151

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225451705|ref|XP_002279246.1| PREDICTED: UDP-glycosyltransferase 83A1 [Vitis vinifera]

 Score =  187 bits (475), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 86/151 (56%), Positives = 114/151 (75%)

Query: 1   MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQI 60
           M   HVL +P  AQGHVIPL+E SQ L   GF+VTFVNTD+  +RI++S  GK+D+ +QI
Sbjct: 1   MGSLHVLAIPYAAQGHVIPLMELSQNLVMHGFKVTFVNTDFSQERIVKSFAGKDDVRDQI 60

Query: 61  RLVSIPDGMEPWEDRNDFGKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAWS 120
           RLVSIPDG+E WEDRND GK  E +L+VMP KLEELI++IN  +D ++ C IADG+M W+
Sbjct: 61  RLVSIPDGLEAWEDRNDLGKACEGILRVMPKKLEELIQEINRTDDHEIACVIADGHMGWA 120

Query: 121 MEVAKKMNVRGALFWPSSAASVALLFHIPKL 151
           +EVA+K+ ++ A FWPS+AA + L F +  L
Sbjct: 121 LEVAEKLGIKRAAFWPSAAAMMVLTFRMQNL 151

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147767625|emb|CAN60198.1| hypothetical protein VITISV_004920 [Vitis vinifera]

 Score =  187 bits (475), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 86/151 (56%), Positives = 114/151 (75%)

Query: 1   MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQI 60
           M   HVL +P  AQGHVIPL+E SQ L   GF+VTFVNTD+  +RI++S  GK+D+ +QI
Sbjct: 1   MGSLHVLAIPYAAQGHVIPLMELSQNLVMHGFKVTFVNTDFSQERIVKSFAGKDDVRDQI 60

Query: 61  RLVSIPDGMEPWEDRNDFGKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAWS 120
           RLVSIPDG+E WEDRND GK  E +L+VMP KLEELI++IN  +D ++ C IADG+M W+
Sbjct: 61  RLVSIPDGLEAWEDRNDLGKACEGILRVMPKKLEELIQEINRTDDHEIACVIADGHMGWA 120

Query: 121 MEVAKKMNVRGALFWPSSAASVALLFHIPKL 151
           +EVA+K+ ++ A FWPS+AA + L F +  L
Sbjct: 121 LEVAEKLGIKRAAFWPSAAAMMVLTFRMQNL 151

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	160
TAIR|locus:2078608	464	AT3G02100 [Arabidopsis thalian	1.0	0.344	0.518	1.3e-38
TAIR|locus:2032105	489	UGT85A4 "AT1G78270" [Arabidops	0.956	0.312	0.366	3.1e-24
TAIR|locus:2196496	479	UGT85A5 "UDP-glucosyl transfer	0.95	0.317	0.356	3.7e-23
TAIR|locus:2196501	481	UGT85A2 "UDP-glucosyl transfer	0.95	0.316	0.331	1.3e-20
TAIR|locus:2196516	487	UGT85A7 "UDP-glucosyl transfer	0.956	0.314	0.327	3.7e-20
TAIR|locus:2057976	490	AT2G36970 [Arabidopsis thalian	0.943	0.308	0.333	6.3e-20
TAIR|locus:2009557	489	UGT85A1 [Arabidopsis thaliana	0.95	0.310	0.337	1e-19
TAIR|locus:2196490	488	UGT85A3 "AT1G22380" [Arabidops	0.956	0.313	0.345	1.3e-19
TAIR|locus:2091628	461	AT3G22250 [Arabidopsis thalian	0.912	0.316	0.307	2.7e-15
TAIR|locus:2046193	482	AT2G28080 "AT2G28080" [Arabido	0.912	0.302	0.318	1e-14

TAIR|locus:2078608 AT3G02100 [Arabidopsis thaliana (taxid:3702)]

 Score = 413 (150.4 bits), Expect = 1.3e-38, P = 1.3e-38
 Identities = 86/166 (51%), Positives = 117/166 (70%)

Query:     1 MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGK--ND-LG 57
             M RPHV+V+P PAQGHV+PL+ FS+ LAKQG ++TF+NT+++H RI+ SL      D +G
Sbjct:     9 MGRPHVVVIPYPAQGHVLPLISFSRYLAKQGIQITFINTEFNHNRIISSLPNSPHEDYVG 68

Query:    58 EQIRLVSIPDGMEPW-EDRNDFGKLFEKVLQVMPGKLEELIEDINSREDEK--LDCFIAD 114
             +QI LVSIPDG+E   E+RN  GKL E VL+ MP K+EELIE + +       + C +AD
Sbjct:    69 DQINLVSIPDGLEDSPEERNIPGKLSESVLRFMPKKVEELIERMMAETSGGTIISCVVAD 128

Query:   115 GYMAWSMEVAKKMNVRGALFWPSSAASVALLFHIPKLIDDGIIDSN 160
               + W++EVA K  +R   F P++AAS+ L F I KLIDDG+IDS+
Sbjct:   129 QSLGWAIEVAAKFGIRRTAFCPAAAASMVLGFSIQKLIDDGLIDSD 174

GO:0005634 "nucleus" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0008194 "UDP-glycosyltransferase activity" evidence=ISS

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0016758 "transferase activity, transferring hexosyl groups" evidence=IEA

TAIR|locus:2032105 UGT85A4 "AT1G78270" [Arabidopsis thaliana (taxid:3702)]

 Score = 282 (104.3 bits), Expect = 3.1e-24, P = 3.1e-24
 Identities = 59/161 (36%), Positives = 96/161 (59%)

Query:     3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLG--EQI 60
             +PH + +P PAQGH+ P+L+ ++ L  +GF VTFVNTDY+H+RI++S  G + L      
Sbjct:    11 KPHAMCIPYPAQGHINPMLKLAKLLHARGFHVTFVNTDYNHRRILQS-RGPHALNGLPSF 69

Query:    61 RLVSIPDGMEPWED---RNDFGKLFEKVLQVMPGKLEELIEDINSRED-EKLDCFIADGY 116
             R  +IPDG+ PW D   + D  KL +  +       ++LI  +NS  D   + C I+D  
Sbjct:    70 RFETIPDGL-PWTDVDAKQDMLKLIDSTINNCLAPFKDLILRLNSGSDIPPVSCIISDAS 128

Query:   117 MAWSMEVAKKMNVRGALFWPSSAASVALLFHIPKLIDDGII 157
             M+++++ A+++ +   L W +SA ++ L  H  KLI+  II
Sbjct:   129 MSFTIDAAEELKIPVVLLWTNSATALILYLHYQKLIEKEII 169

GO:0005575 "cellular_component" evidence=ND

GO:0008152 "metabolic process" evidence=IEA

GO:0008194 "UDP-glycosyltransferase activity" evidence=ISS

GO:0016758 "transferase activity, transferring hexosyl groups" evidence=IEA;ISS

GO:0015020 "glucuronosyltransferase activity" evidence=ISS

TAIR|locus:2196496 UGT85A5 "UDP-glucosyl transferase 85A5" [Arabidopsis thaliana (taxid:3702)]

 Score = 272 (100.8 bits), Expect = 3.7e-23, P = 3.7e-23
 Identities = 57/160 (35%), Positives = 94/160 (58%)

Query:     3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLG--EQI 60
             +PHV+ +P PAQGH+ P+L+ ++ L  +GF VTFVNT+Y+H R++ S  G N L      
Sbjct:    11 KPHVVCIPFPAQGHINPMLKVAKLLYARGFHVTFVNTNYNHNRLIRS-RGPNSLDGLPSF 69

Query:    61 RLVSIPDGMEPWEDRN---DFGKLFEKVLQVMPGKLEELIEDINSRED-EKLDCFIADGY 116
             R  SIPDG+ P E+++   D   L E  ++      +EL+  IN+ +D   + C ++DG 
Sbjct:    70 RFESIPDGL-PEENKDVMQDVPTLCESTMKNCLAPFKELLRRINTTKDVPPVSCIVSDGV 128

Query:   117 MAWSMEVAKKMNVRGALFWPSSAASVALLFHIPKLIDDGI 156
             M+++++ A+++ V   LFW  SA       H  + I+ G+
Sbjct:   129 MSFTLDAAEELGVPDVLFWTPSACGFLAYLHFYRFIEKGL 168

GO:0005634 "nucleus" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0016758 "transferase activity, transferring hexosyl groups" evidence=IEA

GO:0015020 "glucuronosyltransferase activity" evidence=ISS

TAIR|locus:2196501 UGT85A2 "UDP-glucosyl transferase 85A2" [Arabidopsis thaliana (taxid:3702)]

 Score = 249 (92.7 bits), Expect = 1.3e-20, P = 1.3e-20
 Identities = 53/160 (33%), Positives = 91/160 (56%)

Query:     3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLG--EQI 60
             + HV+ +P PAQGH+ P+++ ++ L  +GF +TFVNT Y+H R++ S  G N +      
Sbjct:     8 KQHVVCVPYPAQGHINPMMKVAKLLYAKGFHITFVNTVYNHNRLLRS-RGPNAVDGLPSF 66

Query:    61 RLVSIPDGMEPWED---RNDFGKLFEKVLQVMPGKLEELIEDINSRED-EKLDCFIADGY 116
             R  SIPDG+ P  D     D   L E  ++      +EL+  IN+R+D   + C ++DG 
Sbjct:    67 RFESIPDGL-PETDVDVTQDIPTLCESTMKHCLAPFKELLRQINARDDVPPVSCIVSDGC 125

Query:   117 MAWSMEVAKKMNVRGALFWPSSAASVALLFHIPKLIDDGI 156
             M+++++ A+++ V   LFW +SA       +  + I+ G+
Sbjct:   126 MSFTLDAAEELGVPEVLFWTTSACGFLAYLYYYRFIEKGL 165

GO:0005634 "nucleus" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0008194 "UDP-glycosyltransferase activity" evidence=ISS

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0016758 "transferase activity, transferring hexosyl groups" evidence=IEA

GO:0015020 "glucuronosyltransferase activity" evidence=ISS

TAIR|locus:2196516 UGT85A7 "UDP-glucosyl transferase 85A7" [Arabidopsis thaliana (taxid:3702)]

 Score = 245 (91.3 bits), Expect = 3.7e-20, P = 3.7e-20
 Identities = 52/159 (32%), Positives = 90/159 (56%)

Query:     3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLG--EQI 60
             +PHV+ +P PAQGH+ P+L+ ++ L  +GF VTFVNT Y+H R++ S  G N L      
Sbjct:    11 KPHVVCVPYPAQGHINPMLKVAKLLYAKGFHVTFVNTLYNHNRLLRS-RGPNALDGFPSF 69

Query:    61 RLVSIPDGMEPWE-DRNDFGK-LFEKVLQVMPGKLEELIEDINSRED-EKLDCFIADGYM 117
             R  SIPDG+   + DR      +   + +      +E++  IN ++D   + C ++DG M
Sbjct:    70 RFESIPDGLPETDGDRTQHTPTVCMSIEKNCLAPFKEILRRINDKDDVPPVSCIVSDGVM 129

Query:   118 AWSMEVAKKMNVRGALFWPSSAASVALLFHIPKLIDDGI 156
             +++++ A+++ V   +FW +SA     + H    I+ G+
Sbjct:   130 SFTLDAAEELGVPEVIFWTNSACGFMTILHFYLFIEKGL 168

GO:0005634 "nucleus" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0008194 "UDP-glycosyltransferase activity" evidence=ISS

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0016758 "transferase activity, transferring hexosyl groups" evidence=IEA

GO:0015020 "glucuronosyltransferase activity" evidence=ISS

TAIR|locus:2057976 AT2G36970 [Arabidopsis thaliana (taxid:3702)]

 Score = 243 (90.6 bits), Expect = 6.3e-20, P = 6.3e-20
 Identities = 55/165 (33%), Positives = 86/165 (52%)

Query:     3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGE---- 58
             +PH++++P P QGHVIP +  +  LA  GF +TFVNTD  H  I  S   ++D G+    
Sbjct:     8 KPHIMMIPYPLQGHVIPFVHLAIKLASHGFTITFVNTDSIHHHI--STAHQDDAGDIFSA 65

Query:    59 -------QIRLVSIPDGMEPWEDRN-DFGKLFEKVLQVMPGKLEELIEDINSREDEKLDC 110
                     IR  ++ DG     DR+ +  + FE +L V    +++LI  ++ R+D  + C
Sbjct:    66 ARSSGQHDIRYTTVSDGFPLDFDRSLNHDQFFEGILHVFSAHVDDLIAKLSRRDDPPVTC 125

Query:   111 FIADGYMAWSMEVAKKMNVRGALFWPSSAASVALLFHIPKLIDDG 155
              IAD +  WS  +  K N+    FW   A  + L +H+  LI +G
Sbjct:   126 LIADTFYVWSSMICDKHNLVNVSFWTEPALVLNLYYHMDLLISNG 170

GO:0008152 "metabolic process" evidence=IEA

GO:0008194 "UDP-glycosyltransferase activity" evidence=ISS

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0016758 "transferase activity, transferring hexosyl groups" evidence=IEA

GO:0009873 "ethylene mediated signaling pathway" evidence=RCA

TAIR|locus:2009557 UGT85A1 [Arabidopsis thaliana (taxid:3702)]

 Score = 241 (89.9 bits), Expect = 1.0e-19, P = 1.0e-19
 Identities = 54/160 (33%), Positives = 89/160 (55%)

Query:     3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLG--EQI 60
             +PHV+ +P PAQGH+ P++  ++ L  +GF VTFVNT Y+H R + S  G N L      
Sbjct:    11 KPHVVCVPYPAQGHINPMMRVAKLLHARGFYVTFVNTVYNHNRFLRS-RGSNALDGLPSF 69

Query:    61 RLVSIPDGMEPWEDRN---DFGKLFEKVLQVMPGKLEELIEDINSRED-EKLDCFIADGY 116
             R  SI DG+ P  D +   D   L E  ++       EL++ IN+ ++   + C ++DG 
Sbjct:    70 RFESIADGL-PETDMDATQDITALCESTMKNCLAPFRELLQRINAGDNVPPVSCIVSDGC 128

Query:   117 MAWSMEVAKKMNVRGALFWPSSAASVALLFHIPKLIDDGI 156
             M+++++VA+++ V   LFW +S  +     H    I+ G+
Sbjct:   129 MSFTLDVAEELGVPEVLFWTTSGCAFLAYLHFYLFIEKGL 168

GO:0008152 "metabolic process" evidence=IEA

GO:0008194 "UDP-glycosyltransferase activity" evidence=ISS

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0016758 "transferase activity, transferring hexosyl groups" evidence=IEA;ISS

GO:0050403 "trans-zeatin O-beta-D-glucosyltransferase activity" evidence=IDA

GO:0050502 "cis-zeatin O-beta-D-glucosyltransferase activity" evidence=IDA

GO:0015020 "glucuronosyltransferase activity" evidence=ISS

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

TAIR|locus:2196490 UGT85A3 "AT1G22380" [Arabidopsis thaliana (taxid:3702)]

 Score = 240 (89.5 bits), Expect = 1.3e-19, P = 1.3e-19
 Identities = 55/159 (34%), Positives = 90/159 (56%)

Query:     3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLG--EQI 60
             +PHV+ +P PAQGH+ P+++ ++ L  +GF VTFVNT Y+H R++ S  G N L      
Sbjct:    11 KPHVVCVPYPAQGHINPMMKVAKLLHVKGFHVTFVNTVYNHNRLLRS-RGANALDGLPSF 69

Query:    61 RLVSIPDGM-EPWEDRN-DFGKLFEKVLQVMPGKLEELIEDINSRED-EKLDCFIADGYM 117
             +  SIPDG+ E   D   D   L E   +      ++L++ I +RED   + C ++DG M
Sbjct:    70 QFESIPDGLPETGVDATQDIPALSESTTKNCLVPFKKLLQRIVTREDVPPVSCIVSDGSM 129

Query:   118 AWSMEVAKKMNVRGALFWPSSAASVALLFHIPKLIDDGI 156
             +++++VA+++ V    FW +SA       H    I+ G+
Sbjct:   130 SFTLDVAEELGVPEIHFWTTSACGFMAYLHFYLFIEKGL 168

GO:0005575 "cellular_component" evidence=ND

GO:0008152 "metabolic process" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0016758 "transferase activity, transferring hexosyl groups" evidence=IEA

GO:0015020 "glucuronosyltransferase activity" evidence=ISS

GO:0015824 "proline transport" evidence=RCA

TAIR|locus:2091628 AT3G22250 [Arabidopsis thaliana (taxid:3702)]

 Score = 200 (75.5 bits), Expect = 2.7e-15, P = 2.7e-15
 Identities = 48/156 (30%), Positives = 82/156 (52%)

Query:     3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRL 62
             +P ++ +P PAQGHV P+L  +     +GF    +  +  H+RI  + E   DLG  I  
Sbjct:     6 KPKIIFIPYPAQGHVTPMLHLASAFLSRGFSPVVMTPESIHRRISATNE---DLG--ITF 60

Query:    63 VSIPDGME-PWEDRNDFGKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAWSM 121
             +++ DG + P    +DF  +   +  +MP +LE L+ +    ED  + C + D   +W++
Sbjct:    61 LALSDGQDRPDAPPSDFFSIENSMENIMPPQLERLLLE----EDLDVACVVVDLLASWAI 116

Query:   122 EVAKKMNVRGALFWPSSAASVALLFHIPKLIDDGII 157
              VA +  V  A FWP   A+  L+  IP+L+  G++
Sbjct:   117 GVADRCGVPVAGFWPVMFAAYRLIQAIPELVRTGLV 152

GO:0008152 "metabolic process" evidence=IEA

GO:0008194 "UDP-glycosyltransferase activity" evidence=ISS

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0016758 "transferase activity, transferring hexosyl groups" evidence=IEA

TAIR|locus:2046193 AT2G28080 "AT2G28080" [Arabidopsis thaliana (taxid:3702)]

 Score = 195 (73.7 bits), Expect = 1.0e-14, P = 1.0e-14
 Identities = 49/154 (31%), Positives = 77/154 (50%)

Query:     5 HVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEG------KNDLGE 58
             H L++P P QGHV P +  +  LA QG  VTFVNT Y H +I    +G      +++ G 
Sbjct:    18 HALLIPYPFQGHVNPFVHLAIKLASQGITVTFVNTHYIHHQITNGSDGDIFAGVRSESGL 77

Query:    59 QIRLVSIPDGMEPWEDRNDFGKLFEK-VLQVMPGKLEELIEDINSREDEKLDCFIADGYM 117
              IR  ++ DG+    DR+     ++  +L V    +EEL+  +    D  ++  IAD + 
Sbjct:    78 DIRYATVSDGLPVGFDRSLNHDTYQSSLLHVFYAHVEELVASLVGG-DGGVNVMIADTFF 136

Query:   118 AWSMEVAKKMNVRGALFWPSSAASVALLFHIPKL 151
              W   VA+K  +    FW  +A   +L +H+  L
Sbjct:   137 VWPSVVARKFGLVCVSFWTEAALVFSLYYHMDLL 170

GO:0005575 "cellular_component" evidence=ND

GO:0008152 "metabolic process" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0016758 "transferase activity, transferring hexosyl groups" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	160
PLN02562	448	PLN02562, PLN02562, UDP-glycosyltransferase	9e-24
PLN02448	459	PLN02448, PLN02448, UDP-glycosyltransferase family	9e-15
PLN02534	491	PLN02534, PLN02534, UDP-glycosyltransferase	4e-13
PLN02555	480	PLN02555, PLN02555, limonoid glucosyltransferase	1e-12
PLN02863	477	PLN02863, PLN02863, UDP-glucoronosyl/UDP-glucosyl	2e-11
PLN03007	482	PLN03007, PLN03007, UDP-glucosyltransferase family	3e-11
PLN02173	449	PLN02173, PLN02173, UDP-glucosyl transferase famil	8e-10
PLN02410	451	PLN02410, PLN02410, UDP-glucoronosyl/UDP-glucosyl	7e-09
PLN02152	455	PLN02152, PLN02152, indole-3-acetate beta-glucosyl	3e-07
PLN02210	456	PLN02210, PLN02210, UDP-glucosyl transferase	1e-06
PLN02670	472	PLN02670, PLN02670, transferase, transferring glyc	2e-06
PLN02554	481	PLN02554, PLN02554, UDP-glycosyltransferase family	9e-06
COG1819	406	COG1819, COG1819, Glycosyl transferases, related t	1e-05
PLN02992	481	PLN02992, PLN02992, coniferyl-alcohol glucosyltran	5e-04
PLN00414	446	PLN00414, PLN00414, glycosyltransferase family pro	0.001
cd03784	401	cd03784, GT1_Gtf_like, This family includes the Gt	0.003

>gnl|CDD|215305 PLN02562, PLN02562, UDP-glycosyltransferase

 Score = 95.7 bits (238), Expect = 9e-24
 Identities = 50/157 (31%), Positives = 84/157 (53%), Gaps = 7/157 (4%)

Query: 1   MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQI 60
             RP ++++P PAQGHV P+L+ +     +GF    +  ++ H+RI  +L+ K      I
Sbjct: 4   TQRPKIILVPYPAQGHVTPMLKLASAFLSRGFEPVVITPEFIHRRISATLDPK----LGI 59

Query: 61  RLVSIPDGMEPWEDRNDFGKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAWS 120
             +SI DG +    R DF  +   +   MP +LE L+  ++  ED ++ C + D   +W+
Sbjct: 60  TFMSISDGQDDDPPR-DFFSIENSMENTMPPQLERLLHKLD--EDGEVACMVVDLLASWA 116

Query: 121 MEVAKKMNVRGALFWPSSAASVALLFHIPKLIDDGII 157
           + VA +  V  A FWP   A+  L+  IP+L+  G+I
Sbjct: 117 IGVADRCGVPVAGFWPVMLAAYRLIQAIPELVRTGLI 153

Length = 448

>gnl|CDD|215247 PLN02448, PLN02448, UDP-glycosyltransferase family protein

 Score = 70.0 bits (172), Expect = 9e-15
 Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 12/154 (7%)

Query: 5   HVLVLPIPAQGHVIPLLEFSQCLA--KQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRL 62
           HV+ +P P +GH+ P++   + LA  K    +TFV T+         L G +   + IR 
Sbjct: 12  HVVAMPYPGRGHINPMMNLCKLLASRKPDILITFVVTEEWL-----GLIGSDPKPDNIRF 66

Query: 63  VSIPDGMEPWEDR-NDFGKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAWSM 121
            +IP+ +     R  DF    E V+  M    E+L++ +       +   +AD Y+ W++
Sbjct: 67  ATIPNVIPSELVRAADFPGFLEAVMTKMEAPFEQLLDRLEPP----VTAIVADTYLFWAV 122

Query: 122 EVAKKMNVRGALFWPSSAASVALLFHIPKLIDDG 155
            V  + N+  A  W  SA   ++ +H   L  +G
Sbjct: 123 GVGNRRNIPVASLWTMSATFFSVFYHFDLLPQNG 156

Length = 459

>gnl|CDD|215293 PLN02534, PLN02534, UDP-glycosyltransferase

 Score = 65.3 bits (159), Expect = 4e-13
 Identities = 35/145 (24%), Positives = 74/145 (51%), Gaps = 17/145 (11%)

Query: 2   NRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIR 61
            + H +++P+ AQGH+IP+++ ++ LA++G  V+ V T  +  R  ++++   + G  IR
Sbjct: 7   KQLHFVLIPLMAQGHMIPMIDMARLLAERGVIVSLVTTPQNASRFAKTIDRARESGLPIR 66

Query: 62  LVSIP------------DGMEPWEDRNDFGKLFEKVLQVMPGKLEELIEDINSREDEKLD 109
           LV IP            + ++    R+   K ++ V      KL++ +E    +      
Sbjct: 67  LVQIPFPCKEVGLPIGCENLDTLPSRDLLRKFYDAV-----DKLQQPLERFLEQAKPPPS 121

Query: 110 CFIADGYMAWSMEVAKKMNVRGALF 134
           C I+D  ++W+ + A++ N+   +F
Sbjct: 122 CIISDKCLSWTSKTAQRFNIPRIVF 146

Length = 491

>gnl|CDD|178170 PLN02555, PLN02555, limonoid glucosyltransferase

 Score = 64.0 bits (156), Expect = 1e-12
 Identities = 41/155 (26%), Positives = 74/155 (47%), Gaps = 17/155 (10%)

Query: 4   PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQ---- 59
            HV+++  P QGHV PLL   + LA +G  VTFV T+   K++ ++    N + +     
Sbjct: 8   VHVMLVSFPGQGHVNPLLRLGKLLASKGLLVTFVTTESWGKKMRQA----NKIQDGVLKP 63

Query: 60  -----IRLVSIPDGMEPWEDRNDFGKLFEKVLQVMPGKLE--ELIEDINSREDEKLDCFI 112
                IR     DG    + R     L+   L+++ GK E   L++   + +   + C I
Sbjct: 64  VGDGFIRFEFFEDGWAEDDPRRQDLDLYLPQLELV-GKREIPNLVKR-YAEQGRPVSCLI 121

Query: 113 ADGYMAWSMEVAKKMNVRGALFWPSSAASVALLFH 147
            + ++ W  +VA+++ +  A+ W  S A  +  +H
Sbjct: 122 NNPFIPWVCDVAEELGIPSAVLWVQSCACFSAYYH 156

Length = 480

>gnl|CDD|215465 PLN02863, PLN02863, UDP-glucoronosyl/UDP-glucosyl transferase family protein

 Score = 60.3 bits (146), Expect = 2e-11
 Identities = 43/158 (27%), Positives = 77/158 (48%), Gaps = 13/158 (8%)

Query: 5   HVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRL-- 62
           HVLV P PAQGH+IPLL+ +  LA +G  +T + T  +    +  L  K+   E + L  
Sbjct: 11  HVLVFPFPAQGHMIPLLDLTHRLALRGLTITVLVTPKNLP-FLNPLLSKHPSIETLVLPF 69

Query: 63  ---VSIPDGMEPWEDRNDFGKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAW 119
               SIP G+E  +D       F  ++  +      L+    S     +   I+D ++ W
Sbjct: 70  PSHPSIPSGVENVKDLP--PSGFPLMIHALGELYAPLLSWFRSHPSPPV-AIISDMFLGW 126

Query: 120 SMEVAKKMNVRGALFWPSSAASVALLF----HIPKLID 153
           +  +A ++ +R  +F PS A ++++++     +P  I+
Sbjct: 127 TQNLACQLGIRRFVFSPSGAMALSIMYSLWREMPTKIN 164

Length = 477

>gnl|CDD|178584 PLN03007, PLN03007, UDP-glucosyltransferase family protein

 Score = 59.9 bits (145), Expect = 3e-11
 Identities = 34/146 (23%), Positives = 63/146 (43%), Gaps = 25/146 (17%)

Query: 3   RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRL 62
           + H+L  P  A GH+IP L+ ++  + +G + T + T  + K   + +E   +L   + +
Sbjct: 5   KLHILFFPFMAHGHMIPTLDMAKLFSSRGAKSTILTTPLNAKIFEKPIEAFKNLNPGLEI 64

Query: 63  -----------VSIPDGME--------PWEDRNDFGKLFEKVLQVMPGKLEELIEDINSR 103
                      + +P+G E          +D  D    F    +    +LE+L+E     
Sbjct: 65  DIQIFNFPCVELGLPEGCENVDFITSNNNDDSGDLFLKFLFSTKYFKDQLEKLLETT--- 121

Query: 104 EDEKLDCFIADGYMAWSMEVAKKMNV 129
              + DC +AD +  W+ E A+K  V
Sbjct: 122 ---RPDCLVADMFFPWATEAAEKFGV 144

Length = 482

>gnl|CDD|177830 PLN02173, PLN02173, UDP-glucosyl transferase family protein

 Score = 55.8 bits (134), Expect = 8e-10
 Identities = 38/143 (26%), Positives = 65/143 (45%), Gaps = 15/143 (10%)

Query: 3   RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRL 62
           R HVL +P P+QGH+ P+ +F + L  +GF+ T   T +    I        D    I +
Sbjct: 5   RGHVLAVPFPSQGHITPIRQFCKRLHSKGFKTTHTLTTFIFNTI------HLDPSSPISI 58

Query: 63  VSIPDGMEPWEDRNDFGKL--FEKVLQVMPGKLEELIEDI---NSREDEKLDCFIADGYM 117
            +I DG     D+  F       + LQ       + + DI   +   D  + C + D +M
Sbjct: 59  ATISDGY----DQGGFSSAGSVPEYLQNFKTFGSKTVADIIRKHQSTDNPITCIVYDSFM 114

Query: 118 AWSMEVAKKMNVRGALFWPSSAA 140
            W++++A++  +  A F+  S A
Sbjct: 115 PWALDLAREFGLAAAPFFTQSCA 137

Length = 449

>gnl|CDD|178032 PLN02410, PLN02410, UDP-glucoronosyl/UDP-glucosyl transferase family protein

 Score = 53.1 bits (127), Expect = 7e-09
 Identities = 30/143 (20%), Positives = 72/143 (50%), Gaps = 10/143 (6%)

Query: 3   RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRL 62
           R  V+++P+PAQGH+ P+++ ++ L  +GF +T   T +++          +D  +  + 
Sbjct: 7   RRRVVLVPVPAQGHISPMMQLAKTLHLKGFSITIAQTKFNY------FSPSDDFTD-FQF 59

Query: 63  VSIPDGMEPWEDRNDFG--KLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAWS 120
           V+IP+ + P  D  + G  +   K+ +      ++ +  +  ++  ++ C + D +M ++
Sbjct: 60  VTIPESL-PESDFKNLGPIEFLHKLNKECQVSFKDCLGQLVLQQGNEIACVVYDEFMYFA 118

Query: 121 MEVAKKMNVRGALFWPSSAASVA 143
              AK+  +   +F  +SA +  
Sbjct: 119 EAAAKEFKLPNVIFSTTSATAFV 141

Length = 451

>gnl|CDD|177813 PLN02152, PLN02152, indole-3-acetate beta-glucosyltransferase

 Score = 48.5 bits (115), Expect = 3e-07
 Identities = 42/145 (28%), Positives = 64/145 (44%), Gaps = 13/145 (8%)

Query: 1   MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQ-GFRVTFVNTDYDHKRIMESLEGKNDLGEQ 59
           M  PH L++  PAQGHV P L F++ L K  G RVTF        R M  +   N++ E 
Sbjct: 1   MAPPHFLLVTFPAQGHVNPSLRFARRLIKTTGTRVTFATCLSVIHRSM--IPNHNNV-EN 57

Query: 60  IRLVSIPDGMEP-----WEDRNDFGKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIAD 114
           +  ++  DG +       +D  +    FE+        L + IE  N   D  + C I  
Sbjct: 58  LSFLTFSDGFDDGVISNTDDVQNRLVNFERNGD---KALSDFIE-ANLNGDSPVTCLIYT 113

Query: 115 GYMAWSMEVAKKMNVRGALFWPSSA 139
               W+ +VA++ ++   L W   A
Sbjct: 114 ILPNWAPKVARRFHLPSVLLWIQPA 138

Length = 455

>gnl|CDD|215127 PLN02210, PLN02210, UDP-glucosyl transferase

 Score = 46.6 bits (110), Expect = 1e-06
 Identities = 31/144 (21%), Positives = 67/144 (46%), Gaps = 13/144 (9%)

Query: 5   HVLVLPIPAQGHVIPLLEFSQ--CLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRL 62
           HVL++ +  QGH+ P+L+ ++   L+ +    T   T+   + ++ ++E        + L
Sbjct: 10  HVLMVTLAFQGHINPMLKLAKHLSLSSKNLHFTLATTE-QARDLLSTVEKPR---RPVDL 65

Query: 63  VSIPDGMEPWEDRNDFGKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAWSME 122
           V   DG+ P +D      L + + +V    L ++I      E+++  C I+  +  W   
Sbjct: 66  VFFSDGL-PKDDPRAPETLLKSLNKVGAKNLSKII------EEKRYSCIISSPFTPWVPA 118

Query: 123 VAKKMNVRGALFWPSSAASVALLF 146
           VA   N+  A+ W  +  + ++ +
Sbjct: 119 VAAAHNIPCAILWIQACGAYSVYY 142

Length = 456

>gnl|CDD|178275 PLN02670, PLN02670, transferase, transferring glycosyl groups

 Score = 46.0 bits (109), Expect = 2e-06
 Identities = 42/167 (25%), Positives = 74/167 (44%), Gaps = 18/167 (10%)

Query: 2   NRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIR 61
              HV + P  A GH+IP L  S+ LA++G +++F++T  +  R+ +     + L   I 
Sbjct: 5   EVLHVAMFPWLAMGHLIPFLRLSKLLAQKGHKISFISTPRNLHRLPKI---PSQLSSSIT 61

Query: 62  LVSIP----DGMEP-WEDRNDF----GKLFEKVLQVMPGKLEELIEDINSREDEKLDCFI 112
           LVS P     G+    E   D      +L +K   ++   L   +      E  K D  I
Sbjct: 62  LVSFPLPSVPGLPSSAESSTDVPYTKQQLLKKAFDLLEPPLTTFL------ETSKPDWII 115

Query: 113 ADGYMAWSMEVAKKMNVRGALFWPSSAASVALLFHIPKLIDDGIIDS 159
            D    W   +A ++ +  A F   +AA+++ +     L++ G + S
Sbjct: 116 YDYASHWLPSIAAELGISKAFFSLFTAATLSFIGPPSSLMEGGDLRS 162

Length = 472

>gnl|CDD|215304 PLN02554, PLN02554, UDP-glycosyltransferase family protein

 Score = 44.0 bits (104), Expect = 9e-06
 Identities = 31/153 (20%), Positives = 65/153 (42%), Gaps = 10/153 (6%)

Query: 9   LPIPAQGHVIPLLEFSQCLAKQGFRVTF--------VNTDYDHKRIMESLEGKNDLGEQI 60
           +P P  GH+ P +E ++ L     R++            D      + SL   ++  +++
Sbjct: 8   IPSPGIGHLRPTVELAKLLVDSDDRLSITVIIIPSRSGDDASSSAYIASLSASSE--DRL 65

Query: 61  RLVSIPDGMEPWEDRNDFGKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAWS 120
           R   I  G +P  +   F    +     +   + +L++D ++    +L  F+ D +    
Sbjct: 66  RYEVISAGDQPTTEDPTFQSYIDNQKPKVRDAVAKLVDDSSTPSSPRLAGFVVDMFCTSM 125

Query: 121 MEVAKKMNVRGALFWPSSAASVALLFHIPKLID 153
           ++VA +  V   +F+ S+A  + L  H+  L D
Sbjct: 126 IDVANEFGVPSYMFYTSNATFLGLQLHVQMLYD 158

Length = 481

>gnl|CDD|224732 COG1819, COG1819, Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]

 Score = 44.0 bits (104), Expect = 1e-05
 Identities = 34/156 (21%), Positives = 55/156 (35%), Gaps = 12/156 (7%)

Query: 3   RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRL 62
           R  +L +   A GHV P L   + L ++G  V F +T    + +  +         +   
Sbjct: 1   RMKILFVVCGAYGHVNPCLALGKELRRRGHEVVFASTGKFKEFVEAAGLAFVAYPIRDSE 60

Query: 63  VSIPDGMEPWEDRNDFGKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAWSME 122
           ++  DG           K F ++LQ     + EL+E    RE E     + D        
Sbjct: 61  LATEDGKF------AGVKSFRRLLQQFKKLIRELLE--LLRELEPDL--VVDDARLSLGL 110

Query: 123 VAK--KMNVRGALFWPSSAASVALLFHIPKLIDDGI 156
            A+   + V G    P +    A L   P  I   +
Sbjct: 111 AARLLGIPVVGINVAPYTPLPAAGLPLPPVGIAGKL 146

Length = 406

>gnl|CDD|178572 PLN02992, PLN02992, coniferyl-alcohol glucosyltransferase

 Score = 39.2 bits (91), Expect = 5e-04
 Identities = 36/155 (23%), Positives = 62/155 (40%), Gaps = 7/155 (4%)

Query: 1   MNRPHVLVLPIPAQGHVIPLLEFSQCL-AKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQ 59
           + +PH  +   P  GHVIP++E  + L A  GF VT    + D           N  G  
Sbjct: 3   ITKPHAAMFSSPGMGHVIPVIELGKRLSANHGFHVTVFVLETDAASAQSKF--LNSTGVD 60

Query: 60  IRLVSIPDGMEPWEDRNDFGKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAW 119
           I  +  PD +    D +    +  K+  +M   +  L   I     +K    I D +   
Sbjct: 61  IVGLPSPD-ISGLVDPSAH--VVTKIGVIMREAVPTLRSKIAEMH-QKPTALIVDLFGTD 116

Query: 120 SMEVAKKMNVRGALFWPSSAASVALLFHIPKLIDD 154
           ++ +  + N+   +F  S+A  + +  + P L  D
Sbjct: 117 ALCLGGEFNMLTYIFIASNARFLGVSIYYPTLDKD 151

Length = 481

>gnl|CDD|177807 PLN00414, PLN00414, glycosyltransferase family protein

 Score = 38.1 bits (88), Expect = 0.001
 Identities = 41/148 (27%), Positives = 67/148 (45%), Gaps = 14/148 (9%)

Query: 5   HVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRL-- 62
           H  + P    GH+IP L  +  LA++G RVTF      HK+    L+  N   + I    
Sbjct: 6   HAFMYPWFGFGHMIPYLHLANKLAEKGHRVTFFLPKKAHKQ----LQPLNLFPDSIVFEP 61

Query: 63  VSIP--DGMEPW--EDRNDFGKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMA 118
           +++P  DG+ P+  E  +D     +K +      L + IE        K D    D ++ 
Sbjct: 62  LTLPPVDGL-PFGAETASDLPNSTKKPIFDAMDLLRDQIE--AKVRALKPDLIFFD-FVH 117

Query: 119 WSMEVAKKMNVRGALFWPSSAASVALLF 146
           W  E+AK+  ++   +   SAA VA++ 
Sbjct: 118 WVPEMAKEFGIKSVNYQIISAACVAMVL 145

Length = 446

>gnl|CDD|99960 cd03784, GT1_Gtf_like, This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin

 Score = 36.6 bits (85), Expect = 0.003
 Identities = 10/46 (21%), Positives = 17/46 (36%)

Query: 4  PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMES 49
            VL+  I ++G V PL+  +  L   G  V           +  +
Sbjct: 1  MRVLITTIGSRGDVQPLVALAWALRAAGHEVRVATPPEFADLVEAA 46

Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. Length = 401

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	160
PLN02562	448	UDP-glycosyltransferase	99.94
PLN02410	451	UDP-glucoronosyl/UDP-glucosyl transferase family p	99.94
PLN02173	449	UDP-glucosyl transferase family protein	99.94
PLN02152	455	indole-3-acetate beta-glucosyltransferase	99.94
PLN02448	459	UDP-glycosyltransferase family protein	99.93
PLN00164	480	glucosyltransferase; Provisional	99.93
PLN02670	472	transferase, transferring glycosyl groups	99.93
PLN02555	480	limonoid glucosyltransferase	99.93
PLN02554	481	UDP-glycosyltransferase family protein	99.92
PLN02863	477	UDP-glucoronosyl/UDP-glucosyl transferase family p	99.92
PLN02534	491	UDP-glycosyltransferase	99.92
PLN03004	451	UDP-glycosyltransferase	99.92
PLN02210	456	UDP-glucosyl transferase	99.92
PLN02207	468	UDP-glycosyltransferase	99.92
PLN02992	481	coniferyl-alcohol glucosyltransferase	99.91
PLN03007	482	UDP-glucosyltransferase family protein	99.91
PLN02167	475	UDP-glycosyltransferase family protein	99.91
PLN00414	446	glycosyltransferase family protein	99.91
PLN03015	470	UDP-glucosyl transferase	99.91
PLN02208	442	glycosyltransferase family protein	99.9
PLN02764	453	glycosyltransferase family protein	99.89
cd03784	401	GT1_Gtf_like This family includes the Gtfs, a grou	99.8
TIGR01426	392	MGT glycosyltransferase, MGT family. This model de	99.75
PF03033	139	Glyco_transf_28: Glycosyltransferase family 28 N-t	99.6
KOG1192	496	consensus UDP-glucuronosyl and UDP-glucosyl transf	99.35
PHA03392	507	egt ecdysteroid UDP-glucosyltransferase; Provision	99.3
PF00201	500	UDPGT: UDP-glucoronosyl and UDP-glucosyl transfera	99.12
COG1819	406	Glycosyl transferases, related to UDP-glucuronosyl	99.04
PF13528	318	Glyco_trans_1_3: Glycosyl transferase family 1	98.91
TIGR00661	321	MJ1255 conserved hypothetical protein. This model	98.82
PRK12446	352	undecaprenyldiphospho-muramoylpentapeptide beta-N-	98.62
COG0707	357	MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami	98.33
TIGR01133	348	murG undecaprenyldiphospho-muramoylpentapeptide be	98.14
PRK00726	357	murG undecaprenyldiphospho-muramoylpentapeptide be	98.13
cd03785	350	GT1_MurG MurG is an N-acetylglucosaminyltransferas	98.12
TIGR00215	385	lpxB lipid-A-disaccharide synthase. Lipid-A precur	98.02
cd03816	415	GT1_ALG1_like This family is most closely related	97.51
PRK00025	380	lpxB lipid-A-disaccharide synthase; Reviewed	97.51
cd03818	396	GT1_ExpC_like This family is most closely related	97.46
TIGR03590	279	PseG pseudaminic acid biosynthesis-associated prot	97.46
COG4671	400	Predicted glycosyl transferase [General function p	97.24
cd03800	398	GT1_Sucrose_synthase This family is most closely r	97.06
PF13579	160	Glyco_trans_4_4: Glycosyl transferase 4-like domai	97.04
cd03823	359	GT1_ExpE7_like This family is most closely related	97.03
PF13477	139	Glyco_trans_4_2: Glycosyl transferase 4-like	96.98
COG3980	318	spsG Spore coat polysaccharide biosynthesis protei	96.87
PLN02871	465	UDP-sulfoquinovose:DAG sulfoquinovosyltransferase	96.84
PRK10307	412	putative glycosyl transferase; Provisional	96.74
PF04007	335	DUF354: Protein of unknown function (DUF354); Inte	96.72
cd03814	364	GT1_like_2 This family is most closely related to	96.54
cd03794	394	GT1_wbuB_like This family is most closely related	96.54
PRK02261	137	methylaspartate mutase subunit S; Provisional	96.54
cd03808	359	GT1_cap1E_like This family is most closely related	96.52
PF12000	171	Glyco_trans_4_3: Gkycosyl transferase family 4 gro	96.45
cd04962	371	GT1_like_5 This family is most closely related to	96.3
TIGR02468	1050	sucrsPsyn_pln sucrose phosphate synthase/possible	96.19
TIGR02470	784	sucr_synth sucrose synthase. This model represents	96.15
cd03817	374	GT1_UGDG_like This family is most closely related	96.1
PLN00142	815	sucrose synthase	95.81
cd03802	335	GT1_AviGT4_like This family is most closely relate	95.68
cd03796	398	GT1_PIG-A_like This family is most closely related	95.59
cd03805	392	GT1_ALG2_like This family is most closely related	95.56
cd03819	355	GT1_WavL_like This family is most closely related	95.28
cd02067	119	B12-binding B12 binding domain (B12-BD). This doma	95.18
TIGR02472	439	sucr_P_syn_N sucrose-phosphate synthase, putative,	95.14
TIGR03449	405	mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino	95.06
PRK13609	380	diacylglycerol glucosyltransferase; Provisional	94.52
COG1703	323	ArgK Putative periplasmic protein kinase ArgK and	94.4
cd03801	374	GT1_YqgM_like This family is most closely related	94.37
cd04955	363	GT1_like_6 This family is most closely related to	94.3
PLN02275	371	transferase, transferring glycosyl groups	94.28
TIGR03568	365	NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase,	94.2
cd02070	201	corrinoid_protein_B12-BD B12 binding domain of cor	94.09
cd03820	348	GT1_amsD_like This family is most closely related	93.91
cd03786	363	GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th	93.76
TIGR00236	365	wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras	93.58
PRK05749	425	3-deoxy-D-manno-octulosonic-acid transferase; Revi	93.42
cd03795	357	GT1_like_4 This family is most closely related to	93.28
cd03812	358	GT1_CapH_like This family is most closely related	93.16
PLN02846	462	digalactosyldiacylglycerol synthase	92.89
COG1817	346	Uncharacterized protein conserved in archaea [Func	92.8
PF13439	177	Glyco_transf_4: Glycosyltransferase Family 4; PDB:	92.48
cd03798	377	GT1_wlbH_like This family is most closely related	91.82
cd04951	360	GT1_WbdM_like This family is most closely related	91.59
PF02441	129	Flavoprotein: Flavoprotein; InterPro: IPR003382 Th	91.53
cd03825	365	GT1_wcfI_like This family is most closely related	91.43
PRK10916	348	ADP-heptose:LPS heptosyltransferase II; Provisiona	91.17
PRK05986	191	cob(I)alamin adenolsyltransferase/cobinamide ATP-d	91.16
PRK01175	261	phosphoribosylformylglycinamidine synthase I; Prov	91.07
COG0381	383	WecB UDP-N-acetylglucosamine 2-epimerase [Cell env	91.01
COG2185	143	Sbm Methylmalonyl-CoA mutase, C-terminal domain/su	90.43
cd03821	375	GT1_Bme6_like This family is most closely related	90.28
cd03792	372	GT1_Trehalose_phosphorylase Trehalose phosphorylas	90.23
TIGR00087	244	surE 5'/3'-nucleotidase SurE. E. coli SurE is Reco	90.19
PRK08305	196	spoVFB dipicolinate synthase subunit B; Reviewed	90.15
PF02951	119	GSH-S_N: Prokaryotic glutathione synthetase, N-ter	89.79
COG0496	252	SurE Predicted acid phosphatase [General function	89.72
PRK13932	257	stationary phase survival protein SurE; Provisiona	89.61
PRK00654	466	glgA glycogen synthase; Provisional	89.61
PRK10964	322	ADP-heptose:LPS heptosyl transferase I; Provisiona	89.47
cd01425	193	RPS2 Ribosomal protein S2 (RPS2), involved in form	89.39
PRK13934	266	stationary phase survival protein SurE; Provisiona	89.17
TIGR03600	421	phage_DnaB phage replicative helicase, DnaB family	88.73
COG1519	419	KdtA 3-deoxy-D-manno-octulosonic-acid transferase	88.65
TIGR02370	197	pyl_corrinoid methyltransferase cognate corrinoid	88.51
PRK13935	253	stationary phase survival protein SurE; Provisiona	88.31
PF08660	170	Alg14: Oligosaccharide biosynthesis protein Alg14	88.21
PF02310	121	B12-binding: B12 binding domain; InterPro: IPR0061	88.14
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	87.82
PRK08506	472	replicative DNA helicase; Provisional	87.75
cd03811	353	GT1_WabH_like This family is most closely related	87.5
PLN02605	382	monogalactosyldiacylglycerol synthase	87.33
PRK13933	253	stationary phase survival protein SurE; Provisiona	87.2
cd03789	279	GT1_LPS_heptosyltransferase Lipopolysaccharide hep	86.92
PRK14099	485	glycogen synthase; Provisional	86.89
smart00851	90	MGS MGS-like domain. This domain composes the whol	86.5
PRK13931	261	stationary phase survival protein SurE; Provisiona	86.18
cd03807	365	GT1_WbnK_like This family is most closely related	86.12
TIGR02095	473	glgA glycogen/starch synthases, ADP-glucose type.	86.08
cd00561	159	CobA_CobO_BtuR ATP:corrinoid adenosyltransferase B	85.95
PRK01021	608	lpxB lipid-A-disaccharide synthase; Reviewed	85.7
cd02069	213	methionine_synthase_B12_BD B12 binding domain of m	85.62
COG1618	179	Predicted nucleotide kinase [Nucleotide transport	85.57
cd02071	122	MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 bin	85.41
PRK05595	444	replicative DNA helicase; Provisional	85.26
PRK09620	229	hypothetical protein; Provisional	85.2
cd01635	229	Glycosyltransferase_GTB_type Glycosyltransferases	84.97
cd01980	416	Chlide_reductase_Y Chlide_reductase_Y : Y subunit	84.95
TIGR03492	396	conserved hypothetical protein. This protein famil	84.94
PRK06321	472	replicative DNA helicase; Provisional	84.73
PRK00346	250	surE 5'(3')-nucleotidase/polyphosphatase; Provisio	84.41
TIGR02195	334	heptsyl_trn_II lipopolysaccharide heptosyltransfer	84.29
PRK10422	352	lipopolysaccharide core biosynthesis protein; Prov	84.27
PHA02542	473	41 41 helicase; Provisional	84.2
PRK08760	476	replicative DNA helicase; Provisional	83.72
PF02684	373	LpxB: Lipid-A-disaccharide synthetase; InterPro: I	83.43
PF06506	176	PrpR_N: Propionate catabolism activator; InterPro:	83.36
PRK11519	719	tyrosine kinase; Provisional	83.33
PF07894	284	DUF1669: Protein of unknown function (DUF1669); In	83.09
TIGR02852	187	spore_dpaB dipicolinic acid synthetase, B subunit.	82.18
cd01423	116	MGS_CPS_I_III Methylglyoxal synthase-like domain f	82.02
PF01975	196	SurE: Survival protein SurE; InterPro: IPR002828 T	81.86
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	81.77
COG1484	254	DnaC DNA replication protein [DNA replication, rec	81.76
TIGR00665	434	DnaB replicative DNA helicase. This model describe	81.66
cd03791	476	GT1_Glycogen_synthase_DULL1_like This family is mo	81.35
COG2874	235	FlaH Predicted ATPases involved in biogenesis of a	81.18
cd01424	110	MGS_CPS_II Methylglyoxal synthase-like domain from	81.04
PF12146	79	Hydrolase_4: Putative lysophospholipase; InterPro:	81.01
PF08323	245	Glyco_transf_5: Starch synthase catalytic domain;	80.96
PF04413	186	Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid	80.8
cd03799	355	GT1_amsK_like This is a family of GT1 glycosyltran	80.2
cd05844	367	GT1_like_7 Glycosyltransferases catalyze the trans	80.19
TIGR02193	319	heptsyl_trn_I lipopolysaccharide heptosyltransfera	80.1

>PLN02562 UDP-glycosyltransferase

Probab=99.94  E-value=6.6e-26  Score=180.20  Aligned_cols=146  Identities=31%  Similarity=0.623  Sum_probs=115.7

Q ss_pred             CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhHHhhhccCCCCCCCeeeeecCCCCCCCCCcccHHHHH
Q 040291            3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIPDGMEPWEDRNDFGKLF   82 (160)
Q Consensus         3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~   82 (160)
                      +.||+++|+|++||++||++||+.|+.||++||+++++.+..++.+...    ..++++++.+|++.+.+. ..++..+.
T Consensus         6 ~~HVVlvPfPaqGHi~PmL~LAk~Las~G~~VT~vtt~~~~~~~~~~~~----~~~~i~~v~lp~g~~~~~-~~~~~~l~   80 (448)
T PLN02562          6 RPKIILVPYPAQGHVTPMLKLASAFLSRGFEPVVITPEFIHRRISATLD----PKLGITFMSISDGQDDDP-PRDFFSIE   80 (448)
T ss_pred             CcEEEEEcCccccCHHHHHHHHHHHHhCCCEEEEEeCcchhhhhhhccC----CCCCEEEEECCCCCCCCc-cccHHHHH
Confidence            4699999999999999999999999999999999999987665543211    113699999998764321 12343444


Q ss_pred             HHHHHhccHHHHHHHHHHhcCCCCCccEEEecCCCccHHHHHHHhCCccEEEccchHHHHHHHHchhhHHhcC
Q 040291           83 EKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAWSMEVAKKMNVRGALFWPSSAASVALLFHIPKLIDDG  155 (160)
Q Consensus        83 ~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~~~~~~~~~~~~~~~l~~~~  155 (160)
                      ..+...+.+.++++++++...  .+++|||+|.+++|+.++|+++|||.+.|+++++..++++++++.+...+
T Consensus        81 ~a~~~~~~~~l~~ll~~l~~~--~pv~cvI~D~~~~w~~~vA~~~giP~~~f~~~~a~~~~~~~~~~~~~~~~  151 (448)
T PLN02562         81 NSMENTMPPQLERLLHKLDED--GEVACMVVDLLASWAIGVADRCGVPVAGFWPVMLAAYRLIQAIPELVRTG  151 (448)
T ss_pred             HHHHHhchHHHHHHHHHhcCC--CCcEEEEECCccHhHHHHHHHhCCCEEEEechhHHHHHHHHHHHHHhhcc
Confidence            555456788899999887431  35699999999999999999999999999999999999998888765554

>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein

Probab=99.94  E-value=7e-26  Score=179.94  Aligned_cols=145  Identities=21%  Similarity=0.407  Sum_probs=114.5

Q ss_pred             CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhHHhhhccCCCCCCCeeeeecCCCCCCCC-CcccHHHH
Q 040291            3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIPDGMEPWE-DRNDFGKL   81 (160)
Q Consensus         3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~-~~~~~~~~   81 (160)
                      +.||+++|+|++||++||++||+.|+.||+.|||++|+.+....  .     ....++++..+|++++++. +......+
T Consensus         7 ~~HVvlvPfpaqGHi~P~l~LAk~La~~G~~VT~v~T~~n~~~~--~-----~~~~~i~~~~ip~glp~~~~~~~~~~~~   79 (451)
T PLN02410          7 RRRVVLVPVPAQGHISPMMQLAKTLHLKGFSITIAQTKFNYFSP--S-----DDFTDFQFVTIPESLPESDFKNLGPIEF   79 (451)
T ss_pred             CCEEEEECCCccccHHHHHHHHHHHHcCCCEEEEEeCccccccc--c-----cCCCCeEEEeCCCCCCcccccccCHHHH
Confidence            56999999999999999999999999999999999998764211  0     1113699999998876531 22223345


Q ss_pred             HHHHHHhccHHHHHHHHHHhcCCCCCccEEEecCCCccHHHHHHHhCCccEEEccchHHHHHHHHchhhHHhc
Q 040291           82 FEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAWSMEVAKKMNVRGALFWPSSAASVALLFHIPKLIDD  154 (160)
Q Consensus        82 ~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~~~~~~~~~~~~~~~l~~~  154 (160)
                      +..+.+.+.+.++++++++....+.+++|||+|.+++|+.++|+++|||.+.|++++++.++++++++.+.+.
T Consensus        80 ~~~~~~~~~~~~~~~L~~l~~~~~~p~~cVI~D~f~~Wa~dvA~~lgIP~v~F~t~~a~~~~~~~~~~~~~~~  152 (451)
T PLN02410         80 LHKLNKECQVSFKDCLGQLVLQQGNEIACVVYDEFMYFAEAAAKEFKLPNVIFSTTSATAFVCRSVFDKLYAN  152 (451)
T ss_pred             HHHHHHHhHHHHHHHHHHHHhccCCCcEEEEECCcchHHHHHHHHcCCCEEEEEccCHHHHHHHHHHHHHHhc
Confidence            5556566777888888886432224679999999999999999999999999999999999999988777654

>PLN02173 UDP-glucosyl transferase family protein

Probab=99.94  E-value=1.9e-25  Score=177.12  Aligned_cols=140  Identities=24%  Similarity=0.507  Sum_probs=111.1

Q ss_pred             CC--CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhHHhhhccCCCCCCCeeeeecCCCCCCC--CCcc
Q 040291            1 MN--RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIPDGMEPW--EDRN   76 (160)
Q Consensus         1 m~--~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~--~~~~   76 (160)
                      |+  +.||+++|+|++||++||++|||.|+.+|+.|||++|+.+..++...      ..++++++.+|++++++  +...
T Consensus         1 ~~~~~~hvv~~P~paqGHi~P~l~lAk~La~~G~~vT~v~t~~~~~~~~~~------~~~~i~~~~ipdglp~~~~~~~~   74 (449)
T PLN02173          1 MEKMRGHVLAVPFPSQGHITPIRQFCKRLHSKGFKTTHTLTTFIFNTIHLD------PSSPISIATISDGYDQGGFSSAG   74 (449)
T ss_pred             CCCCCcEEEEecCcccccHHHHHHHHHHHHcCCCEEEEEECCchhhhcccC------CCCCEEEEEcCCCCCCccccccc
Confidence            55  36899999999999999999999999999999999999765444221      12469999999888763  2223


Q ss_pred             cHHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEecCCCccHHHHHHHhCCccEEEccchHHHHHHHHc
Q 040291           77 DFGKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAWSMEVAKKMNVRGALFWPSSAASVALLFH  147 (160)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~~~~~~~~~~~~  147 (160)
                      +...++..+.+.+.+.++++++++.... .+++|||+|.|++|+.++|+++|||.+.|++++++.++++++
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~Pv~cvV~D~f~~Wa~dVA~elgIP~v~F~~~~a~~~~~~~~  144 (449)
T PLN02173         75 SVPEYLQNFKTFGSKTVADIIRKHQSTD-NPITCIVYDSFMPWALDLAREFGLAAAPFFTQSCAVNYINYL  144 (449)
T ss_pred             CHHHHHHHHHHhhhHHHHHHHHHhhccC-CCceEEEECCcchhHHHHHHHhCCCEEEEechHHHHHHHHHh
Confidence            3445666666677888999998864321 234999999999999999999999999999999888877654

>PLN02152 indole-3-acetate beta-glucosyltransferase

Probab=99.94  E-value=3.2e-25  Score=176.03  Aligned_cols=145  Identities=25%  Similarity=0.453  Sum_probs=113.3

Q ss_pred             CCCCeEEEEcCCCCCChHHHHHHHHHHHh-CCCEEEEEeCCCC-hhhHHhhhccCCCCCCCeeeeecCCCCCCCC-C-cc
Q 040291            1 MNRPHVLVLPIPAQGHVIPLLEFSQCLAK-QGFRVTFVNTDYD-HKRIMESLEGKNDLGEQIRLVSIPDGMEPWE-D-RN   76 (160)
Q Consensus         1 m~~~~i~~~~~p~~GH~~P~l~la~~L~~-rGh~Vt~~~~~~~-~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~-~-~~   76 (160)
                      |++.||+++|+|++||++||++||+.|++ +|+.|||++|+.+ .+.+.+.    ....++++++.++++++++. . ..
T Consensus         1 ~~~~hvv~~P~p~qGHi~P~l~La~~La~~~G~~vT~v~t~~~~~~~~~~~----~~~~~~i~~~~i~dglp~g~~~~~~   76 (455)
T PLN02152          1 MAPPHFLLVTFPAQGHVNPSLRFARRLIKTTGTRVTFATCLSVIHRSMIPN----HNNVENLSFLTFSDGFDDGVISNTD   76 (455)
T ss_pred             CCCcEEEEecCcccccHHHHHHHHHHHhhCCCcEEEEEeccchhhhhhhcc----CCCCCCEEEEEcCCCCCCccccccc
Confidence            88899999999999999999999999996 6999999999854 2221111    01113699999998776542 1 23


Q ss_pred             cHHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEecCCCccHHHHHHHhCCccEEEccchHHHHHHHHchhh
Q 040291           77 DFGKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAWSMEVAKKMNVRGALFWPSSAASVALLFHIPK  150 (160)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~~~~~~~~~~~~~~~  150 (160)
                      +....+..+...+.+.++++++++.... .+++|||+|.+++|+.++|+++|||.+.|++++++.++++++++.
T Consensus        77 ~~~~~~~~~~~~~~~~l~~~l~~l~~~~-~pv~ciV~D~~~~wa~dvA~~lgIP~~~f~t~~a~~~~~~~~~~~  149 (455)
T PLN02152         77 DVQNRLVNFERNGDKALSDFIEANLNGD-SPVTCLIYTILPNWAPKVARRFHLPSVLLWIQPAFVFDIYYNYST  149 (455)
T ss_pred             cHHHHHHHHHHhccHHHHHHHHHhhccC-CCceEEEECCccHhHHHHHHHhCCCEEEEECccHHHHHHHHHhhc
Confidence            3444455555677888999998865321 356999999999999999999999999999999999999988753

>PLN02448 UDP-glycosyltransferase family protein

Probab=99.93  E-value=4.6e-25  Score=176.13  Aligned_cols=143  Identities=26%  Similarity=0.490  Sum_probs=114.6

Q ss_pred             CCeEEEEcCCCCCChHHHHHHHHHHHhC--CCEEEEEeCCCChhhHHhhhccCCCCCCCeeeeecCCCCCCCC-CcccHH
Q 040291            3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQ--GFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIPDGMEPWE-DRNDFG   79 (160)
Q Consensus         3 ~~~i~~~~~p~~GH~~P~l~la~~L~~r--Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~-~~~~~~   79 (160)
                      +.||+++|+|++||++||++||++|++|  ||+||+++++.+...+.+..     ..++++|+.+|++.+++. ...+..
T Consensus        10 ~~hVvlvp~pa~GHi~P~l~LA~~L~~~~~G~~VT~~~t~~~~~~i~~~~-----~~~gi~fv~lp~~~p~~~~~~~~~~   84 (459)
T PLN02448         10 SCHVVAMPYPGRGHINPMMNLCKLLASRKPDILITFVVTEEWLGLIGSDP-----KPDNIRFATIPNVIPSELVRAADFP   84 (459)
T ss_pred             CcEEEEECCcccccHHHHHHHHHHHHcCCCCcEEEEEeCCchHhHhhccC-----CCCCEEEEECCCCCCCccccccCHH
Confidence            5799999999999999999999999999  99999999998876665421     124799999987654431 123344


Q ss_pred             HHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEecCCCccHHHHHHHhCCccEEEccchHHHHHHHHchhhHHhc
Q 040291           80 KLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAWSMEVAKKMNVRGALFWPSSAASVALLFHIPKLIDD  154 (160)
Q Consensus        80 ~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~~~~~~~~~~~~~~~l~~~  154 (160)
                      .++..+.+.+.+.++++++++.    .++||||+|.+++|+..+|+++|||++.|+++++..++.+++++.+.+.
T Consensus        85 ~~~~~~~~~~~~~~~~~l~~~~----~~~~~VI~D~~~~wa~~vA~~lgIP~v~f~~~~a~~~~~~~~~~~~~~~  155 (459)
T PLN02448         85 GFLEAVMTKMEAPFEQLLDRLE----PPVTAIVADTYLFWAVGVGNRRNIPVASLWTMSATFFSVFYHFDLLPQN  155 (459)
T ss_pred             HHHHHHHHHhHHHHHHHHHhcC----CCcEEEEECCccHHHHHHHHHhCCCeEEEEhHHHHHHHHHHHhhhhhhc
Confidence            4455555556677888887753    3689999999999999999999999999999999999999888766543

>PLN00164 glucosyltransferase; Provisional

Probab=99.93  E-value=1e-24  Score=174.69  Aligned_cols=147  Identities=20%  Similarity=0.373  Sum_probs=111.4

Q ss_pred             CCCCeEEEEcCCCCCChHHHHHHHHHHHhCC----CEEEEEeCCCChh----hHHhhhccCCCCCCCeeeeecCCCCCCC
Q 040291            1 MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQG----FRVTFVNTDYDHK----RIMESLEGKNDLGEQIRLVSIPDGMEPW   72 (160)
Q Consensus         1 m~~~~i~~~~~p~~GH~~P~l~la~~L~~rG----h~Vt~~~~~~~~~----~~~~~~~~~~~~~~~i~~~~l~~~~~~~   72 (160)
                      |.++||+++|+|++||++||++||+.|+.||    +.|||++++.+..    ++............+++++.+|++..+.
T Consensus         1 ~~~~HVVlvPfpaqGHi~P~l~LAk~La~~g~~~~~~vT~~~t~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~p~   80 (480)
T PLN00164          1 MAAPTVVLLPVWGSGHLMSMLEAGKRLLASSGGGALSLTVLVMPPPTPESASEVAAHVRREAASGLDIRFHHLPAVEPPT   80 (480)
T ss_pred             CCCCEEEEeCCcchhHHHHHHHHHHHHHhCCCCCcEEEEEEEcCCCccchhHHHHHHHhhcccCCCCEEEEECCCCCCCC
Confidence            8899999999999999999999999999997    8999999876422    2322111100111259999998753221


Q ss_pred             CCcccHHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEecCCCccHHHHHHHhCCccEEEccchHHHHHHHHchhhHH
Q 040291           73 EDRNDFGKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAWSMEVAKKMNVRGALFWPSSAASVALLFHIPKLI  152 (160)
Q Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~~~~~~~~~~~~~~~l~  152 (160)
                       ...+...++..+.+.+.+.++++++++.    .+++|||+|.+++|+.++|+++|||.+.|++++++.++++++++.+.
T Consensus        81 -~~e~~~~~~~~~~~~~~~~l~~~L~~l~----~pv~cIV~D~f~~Wa~dVA~elgIP~v~F~t~sA~~~~~~~~~~~~~  155 (480)
T PLN00164         81 -DAAGVEEFISRYIQLHAPHVRAAIAGLS----CPVAALVVDFFCTPLLDVARELAVPAYVYFTSTAAMLALMLRLPALD  155 (480)
T ss_pred             -ccccHHHHHHHHHHhhhHHHHHHHHhcC----CCceEEEECCcchhHHHHHHHhCCCEEEEECccHHHHHHHhhhhhhc
Confidence             1112334444455677778888887751    36799999999999999999999999999999999999999988653

>PLN02670 transferase, transferring glycosyl groups

Probab=99.93  E-value=1.1e-24  Score=173.64  Aligned_cols=145  Identities=28%  Similarity=0.462  Sum_probs=109.8

Q ss_pred             CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhHHhhhccCCCCCCCeeeeecC----CCCCCCC-Cccc
Q 040291            3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIP----DGMEPWE-DRND   77 (160)
Q Consensus         3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~----~~~~~~~-~~~~   77 (160)
                      +.||+++|+|++||++||++||+.|+.||+.|||++|+.+..++.+...   ...++++++.+|    ++++++. ...+
T Consensus         6 ~~HVvl~P~paqGHi~P~l~LAk~La~~G~~vT~v~t~~n~~~~~~~~~---~~~~~i~~~~lp~p~~dglp~~~~~~~~   82 (472)
T PLN02670          6 VLHVAMFPWLAMGHLIPFLRLSKLLAQKGHKISFISTPRNLHRLPKIPS---QLSSSITLVSFPLPSVPGLPSSAESSTD   82 (472)
T ss_pred             CcEEEEeCChhhhHHHHHHHHHHHHHhCCCEEEEEeCCchHHhhhhccc---cCCCCeeEEECCCCccCCCCCCcccccc
Confidence            5699999999999999999999999999999999999987655532100   112358888887    4555431 1112


Q ss_pred             H----HHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEecCCCccHHHHHHHhCCccEEEccchHHHHHHHHchhhHHh
Q 040291           78 F----GKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAWSMEVAKKMNVRGALFWPSSAASVALLFHIPKLID  153 (160)
Q Consensus        78 ~----~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~~~~~~~~~~~~~~~l~~  153 (160)
                      .    ..++....+.+.+.+++++++      .+++|||+|.+++|+.++|+++|||++.|+++++..++++++.+.+.+
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~l~~------~~~~cvI~D~f~~wa~~vA~~~gIP~~~f~~~~a~~~~~~~~~~~~~~  156 (472)
T PLN02670         83 VPYTKQQLLKKAFDLLEPPLTTFLET------SKPDWIIYDYASHWLPSIAAELGISKAFFSLFTAATLSFIGPPSSLME  156 (472)
T ss_pred             cchhhHHHHHHHHHHhHHHHHHHHHh------CCCcEEEECCcchhHHHHHHHcCCCEEEEehhhHHHHHHHhhhHhhhh
Confidence            2    123334445667777888765      368999999999999999999999999999999999999876655544


Q ss_pred             cCC
Q 040291          154 DGI  156 (160)
Q Consensus       154 ~~~  156 (160)
                      +|.
T Consensus       157 ~~~  159 (472)
T PLN02670        157 GGD  159 (472)
T ss_pred             ccc
Confidence            443

>PLN02555 limonoid glucosyltransferase

Probab=99.93  E-value=1.7e-24  Score=172.88  Aligned_cols=146  Identities=25%  Similarity=0.482  Sum_probs=111.0

Q ss_pred             CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhHHh--hhccC--CC-CCCCeeeeecCCCCCCCC-Ccc
Q 040291            3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIME--SLEGK--ND-LGEQIRLVSIPDGMEPWE-DRN   76 (160)
Q Consensus         3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~~--~~~~~--~~-~~~~i~~~~l~~~~~~~~-~~~   76 (160)
                      ++||+++|+|++||++||++||+.|+.||..|||++|+.+..++.+  .....  .. ....++|..+|++++++. ...
T Consensus         7 ~~HVv~~PfpaqGHi~Pml~lA~~La~~G~~vT~v~T~~~~~~~~~a~~~~~~~~~~~~~~~i~~~~~pdglp~~~~~~~   86 (480)
T PLN02555          7 LVHVMLVSFPGQGHVNPLLRLGKLLASKGLLVTFVTTESWGKKMRQANKIQDGVLKPVGDGFIRFEFFEDGWAEDDPRRQ   86 (480)
T ss_pred             CCEEEEECCcccccHHHHHHHHHHHHhCCCeEEEEeccchhhhhhccccccccccccCCCCeEEEeeCCCCCCCCccccc
Confidence            5899999999999999999999999999999999999976654432  11000  00 012367776777776542 122


Q ss_pred             cHHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEecCCCccHHHHHHHhCCccEEEccchHHHHHHHHchh
Q 040291           77 DFGKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAWSMEVAKKMNVRGALFWPSSAASVALLFHIP  149 (160)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~~~~~~~~~~~~~~  149 (160)
                      +...++..+...+.+.++++++++.... .+++|||+|.+++|+.++|+++|||.++|++++++.++++++++
T Consensus        87 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~pv~ciV~D~~~~wa~~vA~~~gIP~~~F~t~~a~~~~~~~~~~  158 (480)
T PLN02555         87 DLDLYLPQLELVGKREIPNLVKRYAEQG-RPVSCLINNPFIPWVCDVAEELGIPSAVLWVQSCACFSAYYHYY  158 (480)
T ss_pred             CHHHHHHHHHHhhhHHHHHHHHHHhccC-CCceEEEECCcchHHHHHHHHcCCCeEEeecccHHHHHHHHHHh
Confidence            3444555555567788999998764322 34599999999999999999999999999999999999998875

>PLN02554 UDP-glycosyltransferase family protein

Probab=99.92  E-value=3.3e-24  Score=171.99  Aligned_cols=147  Identities=18%  Similarity=0.348  Sum_probs=104.0

Q ss_pred             CCeEEEEcCCCCCChHHHHHHHHHHHhCC--CEEEEEeCCCChhhHH--hh-hccCC-CCCCCeeeeecCCCCCCCCCcc
Q 040291            3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQG--FRVTFVNTDYDHKRIM--ES-LEGKN-DLGEQIRLVSIPDGMEPWEDRN   76 (160)
Q Consensus         3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rG--h~Vt~~~~~~~~~~~~--~~-~~~~~-~~~~~i~~~~l~~~~~~~~~~~   76 (160)
                      |.||+++|+|++||++||++|||.|+.||  ..|||++|+.+..+..  .. ..... ...++++++.+|++.+......
T Consensus         2 ~~hvvl~P~paqGHi~P~l~LAk~La~~G~~~~vT~v~t~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~~~~~~   81 (481)
T PLN02554          2 KIELVFIPSPGIGHLRPTVELAKLLVDSDDRLSITVIIIPSRSGDDASSSAYIASLSASSEDRLRYEVISAGDQPTTEDP   81 (481)
T ss_pred             ceEEEEeCCcchhhHHHHHHHHHHHHhCCCCEEEEEEeCCCccchhhhhhhhhhhcccCCCCCeEEEEcCCCCCCcccch
Confidence            78999999999999999999999999998  8999999987643211  00 00000 0123699999987643211111


Q ss_pred             cHHHHHHHHHHhccHHHHHHHHHHhcC----CCCCccEEEecCCCccHHHHHHHhCCccEEEccchHHHHHHHHchhhHH
Q 040291           77 DFGKLFEKVLQVMPGKLEELIEDINSR----EDEKLDCFIADGYMAWSMEVAKKMNVRGALFWPSSAASVALLFHIPKLI  152 (160)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~ll~~l~~~----~~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~~~~~~~~~~~~~~~l~  152 (160)
                         .+.. +...+.+.+++.++++...    .+.+++|||+|.+++|+.++|+++|||++.|++++++.+++++|++.+.
T Consensus        82 ---~~~~-~~~~~~~~~~~~l~~l~~~~~~~~~~pv~cvV~D~f~~wa~dvA~~lgIP~~~F~t~sa~~~~~~~~~~~~~  157 (481)
T PLN02554         82 ---TFQS-YIDNQKPKVRDAVAKLVDDSSTPSSPRLAGFVVDMFCTSMIDVANEFGVPSYMFYTSNATFLGLQLHVQMLY  157 (481)
T ss_pred             ---HHHH-HHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEECCcchhHHHHHHHhCCCEEEEeCCcHHHHHHHHhhhhhc
Confidence               2222 2233444555555554211    1123589999999999999999999999999999999999999998764


Q ss_pred             h
Q 040291          153 D  153 (160)
Q Consensus       153 ~  153 (160)
                      .
T Consensus       158 ~  158 (481)
T PLN02554        158 D  158 (481)
T ss_pred             c
Confidence            3

>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein

Probab=99.92  E-value=4.4e-24  Score=170.74  Aligned_cols=139  Identities=25%  Similarity=0.395  Sum_probs=103.4

Q ss_pred             CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhHHhhhccCCCCCCCeeeeecCC----CCCCCC-Cccc
Q 040291            3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIPD----GMEPWE-DRND   77 (160)
Q Consensus         3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~----~~~~~~-~~~~   77 (160)
                      ++||+++|+|++||++||++|||.|+.+|+.|||++|+.+..++.+...    ..++++++.+|.    +++++. ...+
T Consensus         9 ~~HVvl~PfpaqGHi~P~l~LAk~La~~G~~VTfv~T~~n~~~~~~~~~----~~~~i~~~~lp~P~~~~lPdG~~~~~~   84 (477)
T PLN02863          9 GTHVLVFPFPAQGHMIPLLDLTHRLALRGLTITVLVTPKNLPFLNPLLS----KHPSIETLVLPFPSHPSIPSGVENVKD   84 (477)
T ss_pred             CCEEEEecCcccchHHHHHHHHHHHHhCCCEEEEEeCCCcHHHHhhhcc----cCCCeeEEeCCCCCcCCCCCCCcChhh
Confidence            6899999999999999999999999999999999999988766543211    113577766542    233321 1111


Q ss_pred             ----HHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEecCCCccHHHHHHHhCCccEEEccchHHHHHHHHchh
Q 040291           78 ----FGKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAWSMEVAKKMNVRGALFWPSSAASVALLFHIP  149 (160)
Q Consensus        78 ----~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~~~~~~~~~~~~~~  149 (160)
                          ....+......+.+.+.++++++   . .+++|||+|.+++|+.++|+++|||++.||+++++.++++++++
T Consensus        85 ~~~~~~~~~~~a~~~~~~~~~~~l~~~---~-~~p~cvI~D~f~~Wa~dVA~e~GIP~~~F~t~sA~~~~~~~~~~  156 (477)
T PLN02863         85 LPPSGFPLMIHALGELYAPLLSWFRSH---P-SPPVAIISDMFLGWTQNLACQLGIRRFVFSPSGAMALSIMYSLW  156 (477)
T ss_pred             cchhhHHHHHHHHHHhHHHHHHHHHhC---C-CCCeEEEEcCchHhHHHHHHHcCCCEEEEeccCHHHHHHHHHHh
Confidence                11122223334555666666653   1 46799999999999999999999999999999999999998875

>PLN02534 UDP-glycosyltransferase

Probab=99.92  E-value=7.7e-24  Score=169.47  Aligned_cols=143  Identities=26%  Similarity=0.501  Sum_probs=104.0

Q ss_pred             CC-CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhHHhhhccCCCCCCCeeeeecC-----CCCCCC-C
Q 040291            1 MN-RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIP-----DGMEPW-E   73 (160)
Q Consensus         1 m~-~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~-----~~~~~~-~   73 (160)
                      |+ +.||+++|+|++||++||++||+.|++||+.|||++|+.+..++.............++|+.+|     ++++++ +
T Consensus         5 ~~~~~Hvv~vPfpaqGHi~P~l~LAk~La~~G~~vT~v~t~~n~~~~~~~~~~~~~~~~~i~~~~lp~p~~~dglp~~~~   84 (491)
T PLN02534          5 KAKQLHFVLIPLMAQGHMIPMIDMARLLAERGVIVSLVTTPQNASRFAKTIDRARESGLPIRLVQIPFPCKEVGLPIGCE   84 (491)
T ss_pred             cCCCCEEEEECCCCcchHHHHHHHHHHHHhCCCeEEEEECCCcHHHHhhhhhhccccCCCeEEEEcCCCCccCCCCCCcc
Confidence            44 4699999999999999999999999999999999999987655543221100111248898887     466544 1


Q ss_pred             Ccc-----cHHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEecCCCccHHHHHHHhCCccEEEccchHHHHHHHHc
Q 040291           74 DRN-----DFGKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAWSMEVAKKMNVRGALFWPSSAASVALLFH  147 (160)
Q Consensus        74 ~~~-----~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~~~~~~~~~~~~  147 (160)
                      ...     .....+......+.+.+++++++.    +.+++|||+|.+++|+.++|+++|||.++|++++++.++++++
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~l~~~l~~lL~~~----~~pp~cIV~D~f~~Wa~dVA~~lgIP~v~F~t~~a~~~~~~~~  159 (491)
T PLN02534         85 NLDTLPSRDLLRKFYDAVDKLQQPLERFLEQA----KPPPSCIISDKCLSWTSKTAQRFNIPRIVFHGMCCFSLLSSHN  159 (491)
T ss_pred             ccccCCcHHHHHHHHHHHHHhHHHHHHHHHhc----CCCCcEEEECCccHHHHHHHHHhCCCeEEEecchHHHHHHHHH
Confidence            111     111112222334566777777653    1468999999999999999999999999999999998887654

>PLN03004 UDP-glycosyltransferase

Probab=99.92  E-value=9e-24  Score=167.65  Aligned_cols=149  Identities=15%  Similarity=0.308  Sum_probs=106.5

Q ss_pred             CCCCeEEEEcCCCCCChHHHHHHHHHHHhCC--CEEEE--EeCCCChhhHHhhhccCCCCCCCeeeeecCCCCCCC-C--
Q 040291            1 MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQG--FRVTF--VNTDYDHKRIMESLEGKNDLGEQIRLVSIPDGMEPW-E--   73 (160)
Q Consensus         1 m~~~~i~~~~~p~~GH~~P~l~la~~L~~rG--h~Vt~--~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~-~--   73 (160)
                      |++.||+++|+|++||++||++||+.|+.||  +.||+  +++..+...+.+.........++++++.+|++.+.. .  
T Consensus         1 ~~~~Hvvl~P~p~qGHi~P~l~LA~~La~~g~~~~vti~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~~~~~~   80 (451)
T PLN03004          1 MGEEAIVLYPAPPIGHLVSMVELGKTILSKNPSLSIHIILVPPPYQPESTATYISSVSSSFPSITFHHLPAVTPYSSSST   80 (451)
T ss_pred             CCCcEEEEeCCcccchHHHHHHHHHHHHhCCCceEEEEEEecCcchhhhhhhhhccccCCCCCeEEEEcCCCCCCCCccc
Confidence            8899999999999999999999999999998  55555  444433222211110000112369999998765321 1  


Q ss_pred             CcccHHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEecCCCccHHHHHHHhCCccEEEccchHHHHHHHHchhhH
Q 040291           74 DRNDFGKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAWSMEVAKKMNVRGALFWPSSAASVALLFHIPKL  151 (160)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~~~~~~~~~~~~~~~l  151 (160)
                      ...+....+..+.+.+.+.++++++++..  +.+++|||+|.+++|+.++|+++|||.+.|++++++.+++++|+|..
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~--~~pv~cII~D~~~~Wa~~vA~~lgIP~v~F~t~sA~~~~~~~~~~~~  156 (451)
T PLN03004         81 SRHHHESLLLEILCFSNPSVHRTLFSLSR--NFNVRAMIIDFFCTAVLDITADFTFPVYFFYTSGAACLAFSFYLPTI  156 (451)
T ss_pred             cccCHHHHHHHHHHhhhHHHHHHHHhcCC--CCCceEEEECCcchhHHHHHHHhCCCEEEEeCHhHHHHHHHHHHHhc
Confidence            11122223333445677788888887632  13569999999999999999999999999999999999999998754

>PLN02210 UDP-glucosyl transferase

Probab=99.92  E-value=7.3e-24  Score=168.81  Aligned_cols=136  Identities=21%  Similarity=0.429  Sum_probs=105.4

Q ss_pred             CCeEEEEcCCCCCChHHHHHHHHH--HHhCCCEEEEEeCCCChhhHHhhhccCCCCCCCeeeeecCCCCCCCCCcccHHH
Q 040291            3 RPHVLVLPIPAQGHVIPLLEFSQC--LAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIPDGMEPWEDRNDFGK   80 (160)
Q Consensus         3 ~~~i~~~~~p~~GH~~P~l~la~~--L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~   80 (160)
                      +.||+++|+|++||++|+++||++  |++||++|||++|+.+.+++....    .....+++..++++++++.. .+...
T Consensus         8 ~~hvv~~P~pa~GHi~P~l~La~~L~L~~~G~~VT~v~t~~~~~~~~~~~----~~~~~~~~~~~~~glp~~~~-~~~~~   82 (456)
T PLN02210          8 ETHVLMVTLAFQGHINPMLKLAKHLSLSSKNLHFTLATTEQARDLLSTVE----KPRRPVDLVFFSDGLPKDDP-RAPET   82 (456)
T ss_pred             CCEEEEeCCcccccHHHHHHHHHHHHhhcCCcEEEEEeccchhhhhcccc----CCCCceEEEECCCCCCCCcc-cCHHH
Confidence            569999999999999999999999  569999999999998765542211    11235788777777665421 23334


Q ss_pred             HHHHHHHhccHHHHHHHHHHhcCCCCCccEEEecCCCccHHHHHHHhCCccEEEccchHHHHHHHHchh
Q 040291           81 LFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAWSMEVAKKMNVRGALFWPSSAASVALLFHIP  149 (160)
Q Consensus        81 ~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~~~~~~~~~~~~~~  149 (160)
                      ++..+.+.+.+.+++++++      .++||||+|.+++|+..+|+++|||.+.||++++..++++++++
T Consensus        83 ~~~~~~~~~~~~l~~~l~~------~~~~~vI~D~~~~w~~~vA~~lgIP~~~f~~~sa~~~~~~~~~~  145 (456)
T PLN02210         83 LLKSLNKVGAKNLSKIIEE------KRYSCIISSPFTPWVPAVAAAHNIPCAILWIQACGAYSVYYRYY  145 (456)
T ss_pred             HHHHHHHhhhHHHHHHHhc------CCCcEEEECCcchhHHHHHHHhCCCEEEEecccHHHHHHHHhhh
Confidence            4555555555666666654      47999999999999999999999999999999999999888764

>PLN02207 UDP-glycosyltransferase

Probab=99.92  E-value=1.4e-23  Score=167.14  Aligned_cols=151  Identities=18%  Similarity=0.332  Sum_probs=106.1

Q ss_pred             CCCCeEEEEcCCCCCChHHHHHHHHHHHhCC--CEEEEEeCCCCh-hhHHhhhccCCCCCCCeeeeecCCCCC-CC-CCc
Q 040291            1 MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQG--FRVTFVNTDYDH-KRIMESLEGKNDLGEQIRLVSIPDGME-PW-EDR   75 (160)
Q Consensus         1 m~~~~i~~~~~p~~GH~~P~l~la~~L~~rG--h~Vt~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~l~~~~~-~~-~~~   75 (160)
                      |++.|++++|+|++||++||++||+.|+.||  ..|||++++.+. ..+...........++++|+.+|+... .. ...
T Consensus         1 ~~~~hvv~~P~p~qGHi~P~l~lA~~La~~gg~~~vT~~~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~~~~~~~   80 (468)
T PLN02207          1 MRNAELIFIPTPTVGHLVPFLEFARRLIEQDDRIRITILLMKLQGQSHLDTYVKSIASSQPFVRFIDVPELEEKPTLGGT   80 (468)
T ss_pred             CCCcEEEEeCCcchhhHHHHHHHHHHHHhCCCCeEEEEEEcCCCcchhhHHhhhhccCCCCCeEEEEeCCCCCCCccccc
Confidence            8899999999999999999999999999998  999999998764 222111110001123699999986432 11 111


Q ss_pred             ccHHHHHHHHHHhccH----HHHHHHHHHhcCCCCCccEEEecCCCccHHHHHHHhCCccEEEccchHHHHHHHHchhhH
Q 040291           76 NDFGKLFEKVLQVMPG----KLEELIEDINSREDEKLDCFIADGYMAWSMEVAKKMNVRGALFWPSSAASVALLFHIPKL  151 (160)
Q Consensus        76 ~~~~~~~~~~~~~~~~----~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~~~~~~~~~~~~~~~l  151 (160)
                      .+....+..+.+.+.+    .++++++++.. .+.+++|||+|.+++|+.++|+++|||.+.|+++++..++++++++.+
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~pv~cvV~D~~~~w~~~vA~~~gip~~~f~~~~a~~~~~~~~~~~~  159 (468)
T PLN02207         81 QSVEAYVYDVIEKNIPLVRNIVMDILSSLAL-DGVKVKGFVADFFCLPMIDVAKDVSLPFYVFLTTNSGFLAMMQYLADR  159 (468)
T ss_pred             cCHHHHHHHHHHhcchhHHHHHHHHHHHhcc-CCCCeEEEEECCcchHHHHHHHHhCCCEEEEECccHHHHHHHHHhhhc
Confidence            2333333223344533    34555544321 113459999999999999999999999999999999999999988765


Q ss_pred             H
Q 040291          152 I  152 (160)
Q Consensus       152 ~  152 (160)
                      .
T Consensus       160 ~  160 (468)
T PLN02207        160 H  160 (468)
T ss_pred             c
Confidence            4

>PLN02992 coniferyl-alcohol glucosyltransferase

Probab=99.91  E-value=1.7e-23  Score=166.98  Aligned_cols=141  Identities=21%  Similarity=0.343  Sum_probs=106.7

Q ss_pred             CCCeEEEEcCCCCCChHHHHHHHHHHH-hCCCEEEEEeCCCChhhHHhhhccCCCCCCCeeeeecCC----CCCCCCCcc
Q 040291            2 NRPHVLVLPIPAQGHVIPLLEFSQCLA-KQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIPD----GMEPWEDRN   76 (160)
Q Consensus         2 ~~~~i~~~~~p~~GH~~P~l~la~~L~-~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~----~~~~~~~~~   76 (160)
                      .++||+++|+|++||++||++|||.|+ ++|++|||++|+.+..++.+...    ..++++++.+|+    ++++. . .
T Consensus         4 ~~pHVvl~P~paqGHi~P~l~LAk~La~~~g~~vT~v~t~~n~~~~~~~~~----~~~~i~~~~lp~p~~~glp~~-~-~   77 (481)
T PLN02992          4 TKPHAAMFSSPGMGHVIPVIELGKRLSANHGFHVTVFVLETDAASAQSKFL----NSTGVDIVGLPSPDISGLVDP-S-A   77 (481)
T ss_pred             CCcEEEEeCCcccchHHHHHHHHHHHHhCCCcEEEEEeCCCchhhhhhccc----cCCCceEEECCCccccCCCCC-C-c
Confidence            368999999999999999999999998 78999999999987654422211    113688888874    33211 1 1


Q ss_pred             cHHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEecCCCccHHHHHHHhCCccEEEccchHHHHHHHHchhhHH
Q 040291           77 DFGKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAWSMEVAKKMNVRGALFWPSSAASVALLFHIPKLI  152 (160)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~~~~~~~~~~~~~~~l~  152 (160)
                      +....+....+.+.+.++++++++.    .+++|||+|.+++|+.++|+++|||++.|+++++..++++.++|.+.
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~l~~~~----~~p~cvV~D~f~~Wa~dVA~elgIP~v~F~t~sA~~~~~~~~~~~~~  149 (481)
T PLN02992         78 HVVTKIGVIMREAVPTLRSKIAEMH----QKPTALIVDLFGTDALCLGGEFNMLTYIFIASNARFLGVSIYYPTLD  149 (481)
T ss_pred             cHHHHHHHHHHHhHHHHHHHHHhcC----CCCeEEEECCcchhHHHHHHHcCCCEEEEecCcHHHHHHHHhhhhhc
Confidence            2222222333456677888887642    46899999999999999999999999999999999999888887553

>PLN03007 UDP-glucosyltransferase family protein

Probab=99.91  E-value=3.3e-23  Score=166.33  Aligned_cols=140  Identities=29%  Similarity=0.545  Sum_probs=95.4

Q ss_pred             CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhHHhhhccCCCCCC----CeeeeecC---CCCCCCC-C
Q 040291            3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGE----QIRLVSIP---DGMEPWE-D   74 (160)
Q Consensus         3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~----~i~~~~l~---~~~~~~~-~   74 (160)
                      +.||+++|+|++||++|+++||++|++||++|||++++.+..++.+.........+    .+....+|   ++++.+. .
T Consensus         5 ~~hVvlvp~pa~GHi~P~L~LAk~L~~rG~~VT~vtt~~~~~~i~~~~a~~~~~~~~~~~~~~~~~~p~~~~glP~g~e~   84 (482)
T PLN03007          5 KLHILFFPFMAHGHMIPTLDMAKLFSSRGAKSTILTTPLNAKIFEKPIEAFKNLNPGLEIDIQIFNFPCVELGLPEGCEN   84 (482)
T ss_pred             CcEEEEECCCccccHHHHHHHHHHHHhCCCEEEEEECCCchhhhhhhhhhhcccCCCCcceEEEeeCCCCcCCCCCCccc
Confidence            56999999999999999999999999999999999999887655433211000011    34445555   3444321 1


Q ss_pred             c--------ccHHHHHHHHH---HhccHHHHHHHHHHhcCCCCCccEEEecCCCccHHHHHHHhCCccEEEccchHHHHH
Q 040291           75 R--------NDFGKLFEKVL---QVMPGKLEELIEDINSREDEKLDCFIADGYMAWSMEVAKKMNVRGALFWPSSAASVA  143 (160)
Q Consensus        75 ~--------~~~~~~~~~~~---~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~~~~~~~~  143 (160)
                      .        .....+...+.   ..+.+.++++++.      .++||||+|.+++|+..+|+++|||.++||+++++.++
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~------~~~~~IV~D~~~~w~~~vA~~lgIP~v~f~~~~a~~~~  158 (482)
T PLN03007         85 VDFITSNNNDDSGDLFLKFLFSTKYFKDQLEKLLET------TRPDCLVADMFFPWATEAAEKFGVPRLVFHGTGYFSLC  158 (482)
T ss_pred             ccccccccccchHHHHHHHHHHHHHHHHHHHHHHhc------CCCCEEEECCcchhHHHHHHHhCCCeEEeecccHHHHH
Confidence            0        01112222232   2223333433332      47899999999999999999999999999999998877


Q ss_pred             HHHch
Q 040291          144 LLFHI  148 (160)
Q Consensus       144 ~~~~~  148 (160)
                      .++++
T Consensus       159 ~~~~~  163 (482)
T PLN03007        159 ASYCI  163 (482)
T ss_pred             HHHHH
Confidence            76643

>PLN02167 UDP-glycosyltransferase family protein

Probab=99.91  E-value=6.4e-23  Score=164.34  Aligned_cols=151  Identities=16%  Similarity=0.296  Sum_probs=103.8

Q ss_pred             CCCCeEEEEcCCCCCChHHHHHHHHHHHhCC---CEEEEEeCCCChh-hHHhhhccCCCCCCCeeeeecCCCCCC-CCC-
Q 040291            1 MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQG---FRVTFVNTDYDHK-RIMESLEGKNDLGEQIRLVSIPDGMEP-WED-   74 (160)
Q Consensus         1 m~~~~i~~~~~p~~GH~~P~l~la~~L~~rG---h~Vt~~~~~~~~~-~~~~~~~~~~~~~~~i~~~~l~~~~~~-~~~-   74 (160)
                      |++.||+++|+|++||++||++|||.|+.||   +.||++++..... .............++|+|+.+|++..+ +.+ 
T Consensus         1 ~~~~hVv~~PfpaqGHi~P~l~LAk~La~~G~~~t~vt~~~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~p~~~~~   80 (475)
T PLN02167          1 KKEAELIFVPFPSTGHILVTIEFAKRLINLDRRIHTITILYWSLPFAPQADAFLKSLIASEPRIRLVTLPEVQDPPPMEL   80 (475)
T ss_pred             CCccEEEEeCChhhhhHHHHHHHHHHHHhCCCCeEEEEEEECCCCcchhhhHHHhhcccCCCCeEEEECCCCCCCccccc
Confidence            7899999999999999999999999999999   3567777553321 111111000011246999999865311 101 


Q ss_pred             -cccHHHHHHHHHHhccHHHHHHHHHHhcC---CCC-CccEEEecCCCccHHHHHHHhCCccEEEccchHHHHHHHHchh
Q 040291           75 -RNDFGKLFEKVLQVMPGKLEELIEDINSR---EDE-KLDCFIADGYMAWSMEVAKKMNVRGALFWPSSAASVALLFHIP  149 (160)
Q Consensus        75 -~~~~~~~~~~~~~~~~~~~~~ll~~l~~~---~~~-~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~~~~~~~~~~~~~~  149 (160)
                       .......+..+...+.+.++++++++...   .+. +++|||+|.+++|+.++|+++|||.+.|++++++.+++++++|
T Consensus        81 ~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~pv~cvV~D~f~~Wa~dVA~elgIP~v~F~t~~A~~~~~~~~~~  160 (475)
T PLN02167         81 FVKASEAYILEFVKKMVPLVRDALSTLVSSRDESDSVRVAGLVLDFFCVPLIDVGNEFNLPSYIFLTCNAGFLGMMKYLP  160 (475)
T ss_pred             cccchHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCeEEEEECCccHHHHHHHHHhCCCEEEEECccHHHHHHHHHHH
Confidence             11121222233345556677777765321   112 4699999999999999999999999999999999999999887


Q ss_pred             hH
Q 040291          150 KL  151 (160)
Q Consensus       150 ~l  151 (160)
                      ..
T Consensus       161 ~~  162 (475)
T PLN02167        161 ER  162 (475)
T ss_pred             Hh
Confidence            54

>PLN00414 glycosyltransferase family protein

Probab=99.91  E-value=4.4e-23  Score=163.82  Aligned_cols=136  Identities=26%  Similarity=0.405  Sum_probs=97.5

Q ss_pred             CC-CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhHHhhhccCCCCCCCeeeeec--C--CCCCCCC-C
Q 040291            1 MN-RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSI--P--DGMEPWE-D   74 (160)
Q Consensus         1 m~-~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l--~--~~~~~~~-~   74 (160)
                      |. ++||+++|+|++||++||++|||.|++||++|||++++.+..++....    ...+++++..+  |  ++++++. .
T Consensus         1 ~~~~~HVvlvPfpaqGHi~PmL~LAk~Las~G~~VT~vtt~~~~~~i~~~~----~~~~~i~~~~i~lP~~dGLP~g~e~   76 (446)
T PLN00414          1 MGSKFHAFMYPWFGFGHMIPYLHLANKLAEKGHRVTFFLPKKAHKQLQPLN----LFPDSIVFEPLTLPPVDGLPFGAET   76 (446)
T ss_pred             CCCCCEEEEecCcccchHHHHHHHHHHHHhCCCEEEEEeCCchhhhhcccc----cCCCceEEEEecCCCcCCCCCcccc
Confidence            44 569999999999999999999999999999999999988765553211    11135777544  3  4555431 1


Q ss_pred             cccH----HHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEecCCCccHHHHHHHhCCccEEEccchHHHHHHHHc
Q 040291           75 RNDF----GKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAWSMEVAKKMNVRGALFWPSSAASVALLFH  147 (160)
Q Consensus        75 ~~~~----~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~~~~~~~~~~~~  147 (160)
                      ..+.    ...+......+.+.++++++.      .++||||+|. ++|+.++|+++|||++.|++++++.++++++
T Consensus        77 ~~~l~~~~~~~~~~a~~~l~~~l~~~L~~------~~p~cVV~D~-~~wa~~vA~~lgIP~~~F~~~~a~~~~~~~~  146 (446)
T PLN00414         77 ASDLPNSTKKPIFDAMDLLRDQIEAKVRA------LKPDLIFFDF-VHWVPEMAKEFGIKSVNYQIISAACVAMVLA  146 (446)
T ss_pred             cccchhhHHHHHHHHHHHHHHHHHHHHhc------CCCeEEEECC-chhHHHHHHHhCCCEEEEecHHHHHHHHHhC
Confidence            1111    111122222344445555543      4679999995 8999999999999999999999999999877

>PLN03015 UDP-glucosyl transferase

Probab=99.91  E-value=8e-23  Score=162.55  Aligned_cols=148  Identities=20%  Similarity=0.282  Sum_probs=108.6

Q ss_pred             CCCCeEEEEcCCCCCChHHHHHHHHHHHhC-CCEEEEEeCCCChhhHH-hhhccCCCCCCCeeeeecCCCCCCC-CCc-c
Q 040291            1 MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQ-GFRVTFVNTDYDHKRIM-ESLEGKNDLGEQIRLVSIPDGMEPW-EDR-N   76 (160)
Q Consensus         1 m~~~~i~~~~~p~~GH~~P~l~la~~L~~r-Gh~Vt~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~l~~~~~~~-~~~-~   76 (160)
                      |.++||+++|+|++||++||++||+.|++| |..|||+++......+. ...........+++++.+|+...++ ... .
T Consensus         1 ~~~pHvvl~P~p~qGHi~P~l~LAk~La~~~g~~vT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~~l~~~~~   80 (470)
T PLN03015          1 MDQPHALLVASPGLGHLIPILELGNRLSSVLNIHVTILAVTSGSSSPTETEAIHAAAARTTCQITEIPSVDVDNLVEPDA   80 (470)
T ss_pred             CCCcEEEEECCcccccHHHHHHHHHHHHhCCCCeEEEEECCCchhhhccccccccccCCCceEEEECCCCccccCCCCCc
Confidence            788999999999999999999999999987 99999999886554321 1100000011258999888532211 010 1


Q ss_pred             cHHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEecCCCccHHHHHHHhCCc-cEEEccchHHHHHHHHchhhHH
Q 040291           77 DFGKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAWSMEVAKKMNVR-GALFWPSSAASVALLFHIPKLI  152 (160)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP-~i~~~~~~~~~~~~~~~~~~l~  152 (160)
                      +....+....+.+.+.++++++++.    .+++|||+|.+++|+.++|+++||| .+.|++++++.+++++|+|.+.
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~l~~l~----~~~~ciV~D~f~~w~~~vA~~lgIP~~~~f~~~~a~~~~~~~~l~~~~  153 (470)
T PLN03015         81 TIFTKMVVKMRAMKPAVRDAVKSMK----RKPTVMIVDFFGTALMSIADDVGVTAKYVYIPSHAWFLAVMVYLPVLD  153 (470)
T ss_pred             cHHHHHHHHHHhchHHHHHHHHhcC----CCCeEEEEcCCcHHHHHHHHHcCCCEEEEEcCHHHHHHHHHHhhhhhh
Confidence            2322233344577788999998753    3679999999999999999999999 6999999999998999988654

>PLN02208 glycosyltransferase family protein

Probab=99.90  E-value=7.7e-23  Score=162.24  Aligned_cols=137  Identities=25%  Similarity=0.441  Sum_probs=97.9

Q ss_pred             CC-CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhHHhhhccCCCCCCCeeeeecC----CCCCCCC-C
Q 040291            1 MN-RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIP----DGMEPWE-D   74 (160)
Q Consensus         1 m~-~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~----~~~~~~~-~   74 (160)
                      || ++||+++|+|++||++|+++||+.|++||++|||+++..+..++.+..    ....++++..++    ++++++. .
T Consensus         1 ~~~~~hvv~~P~paqGHi~P~l~LAk~La~~G~~VT~vtt~~~~~~i~~~~----a~~~~i~~~~l~~p~~dgLp~g~~~   76 (442)
T PLN02208          1 MEPKFHAFMFPWFAFGHMIPFLHLANKLAEKGHRVTFLLPKKAQKQLEHHN----LFPDSIVFHPLTIPPVNGLPAGAET   76 (442)
T ss_pred             CCCCCEEEEecCccccHHHHHHHHHHHHHhCCCEEEEEeccchhhhhhccc----CCCCceEEEEeCCCCccCCCCCccc
Confidence            66 469999999999999999999999999999999999987766553311    111246665543    3444431 1


Q ss_pred             cccHH----HHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEecCCCccHHHHHHHhCCccEEEccchHHHHHHHHchh
Q 040291           75 RNDFG----KLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAWSMEVAKKMNVRGALFWPSSAASVALLFHIP  149 (160)
Q Consensus        75 ~~~~~----~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~~~~~~~~~~~~~~  149 (160)
                      ..+..    ..+....+.+.+.+++++++      .++||||+| +++|+.++|+++|||++.||+++++.++ +++++
T Consensus        77 ~~~l~~~l~~~~~~~~~~~~~~l~~~L~~------~~~~cVV~D-~~~wa~~vA~e~giP~~~f~~~~a~~~~-~~~~~  147 (442)
T PLN02208         77 TSDIPISMDNLLSEALDLTRDQVEAAVRA------LRPDLIFFD-FAQWIPEMAKEHMIKSVSYIIVSATTIA-HTHVP  147 (442)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHHhh------CCCeEEEEC-CcHhHHHHHHHhCCCEEEEEhhhHHHHH-HHccC
Confidence            11221    12222233445556666654      468999999 6899999999999999999999998765 66665

>PLN02764 glycosyltransferase family protein

Probab=99.89  E-value=5.6e-22  Score=157.23  Aligned_cols=136  Identities=25%  Similarity=0.371  Sum_probs=100.1

Q ss_pred             CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhHHhhhccCCCCCCCeeeeecC--CCCCCC-CCccc--
Q 040291            3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIP--DGMEPW-EDRND--   77 (160)
Q Consensus         3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~--~~~~~~-~~~~~--   77 (160)
                      +.||+++|+|++||++||++||+.|+.||+.|||++|+.+...+.+ .. .....-.+++.++|  ++++++ +...+  
T Consensus         5 ~~Hvvl~P~paqGHi~P~l~LAk~La~~g~~vT~~tt~~~~~~~~~-~~-~~~~~~~v~~~~~p~~~glp~g~e~~~~~~   82 (453)
T PLN02764          5 KFHVLMYPWFATGHMTPFLFLANKLAEKGHTVTFLLPKKALKQLEH-LN-LFPHNIVFRSVTVPHVDGLPVGTETVSEIP   82 (453)
T ss_pred             CcEEEEECCcccccHHHHHHHHHHHHhCCCEEEEEeCcchhhhhcc-cc-cCCCCceEEEEECCCcCCCCCcccccccCC
Confidence            6899999999999999999999999999999999999987654432 10 00001126677777  565544 21111  


Q ss_pred             --HHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEecCCCccHHHHHHHhCCccEEEccchHHHHHHHHc
Q 040291           78 --FGKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAWSMEVAKKMNVRGALFWPSSAASVALLFH  147 (160)
Q Consensus        78 --~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~~~~~~~~~~~~  147 (160)
                        ....+....+.+.+.+++++++      .++||||+|. ++|+.++|+++|||++.|++++++.++++++
T Consensus        83 ~~~~~~~~~a~~~~~~~~~~~l~~------~~~~~iV~D~-~~w~~~vA~~~gIP~~~f~~~~a~~~~~~~~  147 (453)
T PLN02764         83 VTSADLLMSAMDLTRDQVEVVVRA------VEPDLIFFDF-AHWIPEVARDFGLKTVKYVVVSASTIASMLV  147 (453)
T ss_pred             hhHHHHHHHHHHHhHHHHHHHHHh------CCCCEEEECC-chhHHHHHHHhCCCEEEEEcHHHHHHHHHhc
Confidence              1112222334556778888876      3579999995 8999999999999999999999999988864

>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin

Probab=99.80  E-value=2.7e-19  Score=140.57  Aligned_cols=124  Identities=15%  Similarity=0.158  Sum_probs=92.1

Q ss_pred             CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhHHhhhccCCCCCCCeeeeecCCCCCCC----CC-----
Q 040291            4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIPDGMEPW----ED-----   74 (160)
Q Consensus         4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~----~~-----   74 (160)
                      +||+++++|+.||++|++.||++|++|||+|+|++++.+...+++         .|++|..+++.....    ..     
T Consensus         1 mrIl~~~~p~~GHv~P~l~la~~L~~rGh~V~~~t~~~~~~~v~~---------~G~~~~~~~~~~~~~~~~~~~~~~~~   71 (401)
T cd03784           1 MRVLITTIGSRGDVQPLVALAWALRAAGHEVRVATPPEFADLVEA---------AGLEFVPVGGDPDELLASPERNAGLL   71 (401)
T ss_pred             CeEEEEeCCCcchHHHHHHHHHHHHHCCCeEEEeeCHhHHHHHHH---------cCCceeeCCCCHHHHHhhhhhccccc
Confidence            599999999999999999999999999999999999987766654         588888887532211    00     


Q ss_pred             ---cccHHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEecCCCccHHHHHHHhCCccEEEccchH
Q 040291           75 ---RNDFGKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAWSMEVAKKMNVRGALFWPSSA  139 (160)
Q Consensus        75 ---~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~~~~  139 (160)
                         ..........+.+.....++++++.+..   .++||||+|.+..++..+|+++|||++.+++++.
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~pDlvi~d~~~~~~~~~A~~~giP~v~~~~~~~  136 (401)
T cd03784          72 LLGPGLLLGALRLLRREAEAMLDDLVAAARD---WGPDLVVADPLAFAGAVAAEALGIPAVRLLLGPD  136 (401)
T ss_pred             ccchHHHHHHHHHHHHHHHHHHHHHHHHhcc---cCCCEEEeCcHHHHHHHHHHHhCCCeEEeecccC
Confidence               0011122233333444455555555432   6899999999889899999999999999988764

Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.

>TIGR01426 MGT glycosyltransferase, MGT family

Probab=99.75  E-value=9.6e-18  Score=131.62  Aligned_cols=118  Identities=25%  Similarity=0.295  Sum_probs=85.9

Q ss_pred             EcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhHHhhhccCCCCCCCeeeeecCCCCCCCC-C-c---ccHHHHHH
Q 040291            9 LPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIPDGMEPWE-D-R---NDFGKLFE   83 (160)
Q Consensus         9 ~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~-~-~---~~~~~~~~   83 (160)
                      +.+|+.||++|++.||++|++|||+||+++++.+.+.+.+         .|+++..+++...... . .   .+......
T Consensus         1 ~~~p~~Ghv~P~l~lA~~L~~~Gh~V~~~~~~~~~~~v~~---------~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (392)
T TIGR01426         1 FNIPAHGHVNPTLGVVEELVARGHRVTYATTEEFAERVEA---------AGAEFVLYGSALPPPDNPPENTEEEPIDIIE   71 (392)
T ss_pred             CCCCccccccccHHHHHHHHhCCCeEEEEeCHHHHHHHHH---------cCCEEEecCCcCccccccccccCcchHHHHH
Confidence            3579999999999999999999999999999998877765         5888888875432210 0 0   22333333


Q ss_pred             HHHHhccHHHHHHHHHHhcCCCCCccEEEecCCCccHHHHHHHhCCccEEEccch
Q 040291           84 KVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAWSMEVAKKMNVRGALFWPSS  138 (160)
Q Consensus        84 ~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~~~  138 (160)
                      .+...+...+.++.+.+.+   .++||||+|.++.|+..+|+++|||+|.+.+..
T Consensus        72 ~~~~~~~~~~~~l~~~~~~---~~pDlVi~d~~~~~~~~~A~~~giP~v~~~~~~  123 (392)
T TIGR01426        72 KLLDEAEDVLPQLEEAYKG---DRPDLIVYDIASWTGRLLARKWDVPVISSFPTF  123 (392)
T ss_pred             HHHHHHHHHHHHHHHHhcC---CCCCEEEECCccHHHHHHHHHhCCCEEEEehhh
Confidence            3433333344444444332   589999999998999999999999999986543

This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.

>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=99.60  E-value=3e-16  Score=106.29  Aligned_cols=123  Identities=15%  Similarity=0.201  Sum_probs=77.9

Q ss_pred             EEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhHHhhhccCCCCCCCeeeeecCCCCCCCCCcccHHHHHHHH
Q 040291            6 VLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIPDGMEPWEDRNDFGKLFEKV   85 (160)
Q Consensus         6 i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~   85 (160)
                      |++++.++.||++|++.|+++|.+|||+|++.+++.+.+.+++         .|++|++++.+ ................
T Consensus         1 Ili~~~Gt~Ghv~P~lala~~L~~rGh~V~~~~~~~~~~~v~~---------~Gl~~~~~~~~-~~~~~~~~~~~~~~~~   70 (139)
T PF03033_consen    1 ILIATGGTRGHVYPFLALARALRRRGHEVRLATPPDFRERVEA---------AGLEFVPIPGD-SRLPRSLEPLANLRRL   70 (139)
T ss_dssp             EEEEEESSHHHHHHHHHHHHHHHHTT-EEEEEETGGGHHHHHH---------TT-EEEESSSC-GGGGHHHHHHHHHHCH
T ss_pred             CEEEEcCChhHHHHHHHHHHHHhccCCeEEEeecccceecccc---------cCceEEEecCC-cCcCcccchhhhhhhH
Confidence            6899999999999999999999999999999999999888754         58999998754 0110000011111000


Q ss_pred             HH---hccHHHHHHHHHHhc-----CC-CCCccEEEecCCCccHHHHHHHhCCccEEEccchH
Q 040291           86 LQ---VMPGKLEELIEDINS-----RE-DEKLDCFIADGYMAWSMEVAKKMNVRGALFWPSSA  139 (160)
Q Consensus        86 ~~---~~~~~~~~ll~~l~~-----~~-~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~~~~  139 (160)
                      .+   ... ...+.+++...     .. ....|+++.+.....+..+|+++|||++.....+.
T Consensus        71 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~vaE~~~iP~~~~~~~p~  132 (139)
T PF03033_consen   71 ARLIRGLE-EAMRILARFRPDLVVAAGGYVADDVIIAAPLAFAAALVAEQLGIPGVANRLFPW  132 (139)
T ss_dssp             HHHHHHHH-HHHHHHHHHHHCCCCHCTTTTECCEECHHHHHTHHHHHHHHHTS-EEEEESSGG
T ss_pred             HHHhhhhh-HHHHHhhccCcchhhhccCcccchHHHhhhhcCccceeEhhhCchHHHHhhCCc
Confidence            00   111 11122222110     01 12567888888777888999999999999766543

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....

>KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion]

Probab=99.35  E-value=1.6e-12  Score=104.94  Aligned_cols=147  Identities=23%  Similarity=0.369  Sum_probs=89.6

Q ss_pred             CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhHHhhhccCCC----CCCCeeeeecCCCCCCCCCcc--
Q 040291            3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKND----LGEQIRLVSIPDGMEPWEDRN--   76 (160)
Q Consensus         3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~----~~~~i~~~~l~~~~~~~~~~~--   76 (160)
                      +.|++++++|++||++|+.++|++|++|||+||++++.......... .....    ......+...+++++......  
T Consensus         5 ~~~~il~~~p~~sH~~~~~~la~~L~~~gh~vt~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (496)
T KOG1192|consen    5 KAHNILVPFPGQSHLNPMLQLAKRLAERGHNVTVVTPSFNALKLSKS-SKSKSIKKINPPPFEFLTIPDGLPEGWEDDDL   83 (496)
T ss_pred             cceeEEEECCcccHHHHHHHHHHHHHHcCCceEEEEeechhcccCCc-ccceeeeeeecChHHhhhhhhhhccchHHHHH
Confidence            46899999999999999999999999999999999998765432210 00000    000111111111121111000  


Q ss_pred             cHHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEecCCCccHHHHHHHhC-CccEEEccchHHHHHHHHchhh
Q 040291           77 DFGKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAWSMEVAKKMN-VRGALFWPSSAASVALLFHIPK  150 (160)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~~A~~lg-iP~i~~~~~~~~~~~~~~~~~~  150 (160)
                      ........+...+...+++....+......++||+|+|.+..|...++.+.+ |+...+++.++...++..+.+.
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~g~~~~~  158 (496)
T KOG1192|consen   84 DISESLLELNKTCEDLLRDPLEKLLLLKSEKFDLIISDPFLGLFLLLAIPSFVIPLLSFPTSSAVLLALGLPSPL  158 (496)
T ss_pred             HHHHHHHHHHHHHHHHHhchHHHHHHhhcCCccEEEechhhHHHHHhcccceEEEeecccCchHHHHhcCCcCcc
Confidence            1111123333444444555443332222234999999999888888887775 9999999999988877766553

>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional

Probab=99.30  E-value=2.2e-11  Score=98.70  Aligned_cols=127  Identities=14%  Similarity=0.295  Sum_probs=76.8

Q ss_pred             CCeEEEE-cCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhHHhhhccCCCCCCCeeeeecCCCCCCC----CC---
Q 040291            3 RPHVLVL-PIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIPDGMEPW----ED---   74 (160)
Q Consensus         3 ~~~i~~~-~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~----~~---   74 (160)
                      ..+|+.+ |.++.||+.-+.+++++|++|||+||++++..... ....      ...+++...++...+..    ..   
T Consensus        20 ~~kIl~~~P~~~~SH~~~~~~l~~~La~rGH~VTvi~p~~~~~-~~~~------~~~~~~~i~~~~~~~~~~~~~~~~~~   92 (507)
T PHA03392         20 AARILAVFPTPAYSHHSVFKVYVEALAERGHNVTVIKPTLRVY-YASH------LCGNITEIDASLSVEYFKKLVKSSAV   92 (507)
T ss_pred             cccEEEEcCCCCCcHHHHHHHHHHHHHHcCCeEEEEecccccc-cccC------CCCCEEEEEcCCChHHHHHHHhhhhH
Confidence            3567755 88999999999999999999999999998764211 1000      01355555443110000    00   


Q ss_pred             --c-c---cHHH----HHHHHHHhc-----cHHHHHHHHHHhcCCCCCccEEEecCCCccHHHHHHHh-CCccEEEccch
Q 040291           75 --R-N---DFGK----LFEKVLQVM-----PGKLEELIEDINSREDEKLDCFIADGYMAWSMEVAKKM-NVRGALFWPSS  138 (160)
Q Consensus        75 --~-~---~~~~----~~~~~~~~~-----~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~~A~~l-giP~i~~~~~~  138 (160)
                        . .   +...    ....+.+.|     .+.+.+++++    .+.+||++|+|.+..|+..+|+++ ++|.|.+++..
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~----~~~kFDlvi~e~~~~c~~~la~~~~~~p~i~~ss~~  168 (507)
T PHA03392         93 FRKRGVVADSSTVTADNYMGLVRMISDQFDLPNVKNLIAN----KNNKFDLLVTEAFLDYPLVFSHLFGDAPVIQISSGY  168 (507)
T ss_pred             HHhhhhhhhHHHHHHHHHHHHHHHHHHHHCCHHHHHHHhc----CCCceeEEEecccchhHHHHHHHhCCCCEEEEcCCC
Confidence              0 0   0000    111112222     2333444431    125899999999988888899999 99988887754


Q ss_pred             HH
Q 040291          139 AA  140 (160)
Q Consensus       139 ~~  140 (160)
                      ..
T Consensus       169 ~~  170 (507)
T PHA03392        169 GL  170 (507)
T ss_pred             Cc
Confidence            43

>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule

Probab=99.12  E-value=5.5e-13  Score=107.80  Aligned_cols=122  Identities=25%  Similarity=0.369  Sum_probs=60.0

Q ss_pred             CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhHHhhhccCCCCCCCeeeeecCCCCCCCC--C-cc----
Q 040291            4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIPDGMEPWE--D-RN----   76 (160)
Q Consensus         4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~--~-~~----   76 (160)
                      .||+++|. +.||+.++..++++|++|||+||++++.... .+...      ...++++..++.+.+..+  . ..    
T Consensus         1 ~kvLv~p~-~~SH~~~~~~l~~~L~~rGH~VTvl~~~~~~-~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (500)
T PF00201_consen    1 GKVLVFPM-AYSHFIFMRPLAEELAERGHNVTVLTPSPSS-SLNPS------KPSNIRFETYPDPYPEEEFEEIFPEFIS   72 (500)
T ss_dssp             ------------SHHHHHHHHHHHHHH-TTSEEEHHHHHH-T------------S-CCEEEE-----TT------TTHHH
T ss_pred             CEEEEeCC-CcCHHHHHHHHHHHHHhcCCceEEEEeeccc-ccccc------cccceeeEEEcCCcchHHHhhhhHHHHH
Confidence            47888884 7899999999999999999999999885422 12111      124677766665432211  0 00    


Q ss_pred             c----------HHHHHHH-------HHHhccHHH--HHHHHHHhcCCCCCccEEEecCCCccHHHHHHHhCCccEEEcc
Q 040291           77 D----------FGKLFEK-------VLQVMPGKL--EELIEDINSREDEKLDCFIADGYMAWSMEVAKKMNVRGALFWP  136 (160)
Q Consensus        77 ~----------~~~~~~~-------~~~~~~~~~--~~ll~~l~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~  136 (160)
                      .          ....+..       ....|...+  .++++.+++   .++|++|+|.+.+|+..+|+.+|+|.+.+.+
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~l~d~~l~~~l~~---~~fDlvI~d~f~~c~~~la~~l~iP~i~~~s  148 (500)
T PF00201_consen   73 KFFSESSFANSFWEMFKMLNAFFDFFSKSCEDLLSDPELMEQLKS---EKFDLVISDAFDPCGLALAHYLGIPVIIISS  148 (500)
T ss_dssp             HHHHHHCCHHHHHHHHHHHHCHHHS----E--EEEETTSTTHHHH---HHHCT-EEEEEESSHHHHHHHHHHTHHHHHH
T ss_pred             HHhhhcccchhHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHh---hccccceEeeccchhHHHHHHhcCCeEEEec
Confidence            0          1111111       111221111  122223332   4799999999999999999999999987654

This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....

>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]

Probab=99.04  E-value=6e-10  Score=88.17  Aligned_cols=120  Identities=21%  Similarity=0.236  Sum_probs=74.4

Q ss_pred             CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhHHhhhccCCCCCCCeeeeecCCCCCCC--CC-cccH-
Q 040291            3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIPDGMEPW--ED-RNDF-   78 (160)
Q Consensus         3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~--~~-~~~~-   78 (160)
                      ++||+++..|..||++|.+.||++|.+|||+|++++++.+.+.+++         .++.|..++....+.  .+ ..+. 
T Consensus         1 ~mkil~~~~~~~Ghv~p~~aL~~eL~~~gheV~~~~~~~~~~~ve~---------ag~~f~~~~~~~~~~~~~~~~~~~~   71 (406)
T COG1819           1 RMKILFVVCGAYGHVNPCLALGKELRRRGHEVVFASTGKFKEFVEA---------AGLAFVAYPIRDSELATEDGKFAGV   71 (406)
T ss_pred             CceEEEEeccccccccchHHHHHHHHhcCCeEEEEeCHHHHHHHHH---------hCcceeeccccCChhhhhhhhhhcc
Confidence            4799999999999999999999999999999999999999988876         467777665421111  10 1111 


Q ss_pred             HHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEecCCCccHHHHHHHhCCccEEEcc
Q 040291           79 GKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAWSMEVAKKMNVRGALFWP  136 (160)
Q Consensus        79 ~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~  136 (160)
                      ..+.. ..........++++-+.+   ..+|.++.|.-.+.+ .++...++|++....
T Consensus        72 ~~~~~-~~~~~~~~~~~~~~~~~e---~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  124 (406)
T COG1819          72 KSFRR-LLQQFKKLIRELLELLRE---LEPDLVVDDARLSLG-LAARLLGIPVVGINV  124 (406)
T ss_pred             chhHH-HhhhhhhhhHHHHHHHHh---cchhhhhcchhhhhh-hhhhhcccchhhhhh
Confidence            11111 111222223333333332   456777766554433 566666666665433

>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1

Probab=98.91  E-value=2.7e-08  Score=75.91  Aligned_cols=121  Identities=17%  Similarity=0.140  Sum_probs=71.7

Q ss_pred             CeEEEEcCC-CCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhHHhhhccCCCCCCCeeeeecCCC-CCCCCCcccHHHH
Q 040291            4 PHVLVLPIP-AQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIPDG-MEPWEDRNDFGKL   81 (160)
Q Consensus         4 ~~i~~~~~p-~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~-~~~~~~~~~~~~~   81 (160)
                      +||++...+ |.||+.-.+.|+++|  |||+|+|++.....+.+.+          .+....+++- ........+....
T Consensus         1 MkIl~~v~~~G~GH~~R~~~la~~L--rg~~v~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~   68 (318)
T PF13528_consen    1 MKILFYVQGHGLGHASRCLALARAL--RGHEVTFITSGPAPEFLKP----------RFPVREIPGLGPIQENGRLDRWKT   68 (318)
T ss_pred             CEEEEEeCCCCcCHHHHHHHHHHHH--ccCceEEEEcCCcHHHhcc----------ccCEEEccCceEeccCCccchHHH
Confidence            577776644 889999999999999  6999999998765433322          2344444321 1111111111111


Q ss_pred             HHHH---HHhccHHHHHHHHHHhcCCCCCccEEEecCCCccHHHHHHHhCCccEEEccchHH
Q 040291           82 FEKV---LQVMPGKLEELIEDINSREDEKLDCFIADGYMAWSMEVAKKMNVRGALFWPSSAA  140 (160)
Q Consensus        82 ~~~~---~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~~~~~  140 (160)
                      ....   .......++++.+.+..   .+||+||+|. .+.+..+|+..|||++.+......
T Consensus        69 ~~~~~~~~~~~~~~~~~~~~~l~~---~~pDlVIsD~-~~~~~~aa~~~giP~i~i~~~~~~  126 (318)
T PF13528_consen   69 VRNNIRWLARLARRIRREIRWLRE---FRPDLVISDF-YPLAALAARRAGIPVIVISNQYWF  126 (318)
T ss_pred             HHHHHHhhHHHHHHHHHHHHHHHh---cCCCEEEEcC-hHHHHHHHHhcCCCEEEEEehHHc
Confidence            1111   11112234444444443   5899999994 444667899999999987665433

>TIGR00661 MJ1255 conserved hypothetical protein

Probab=98.82  E-value=6.2e-08  Score=74.44  Aligned_cols=119  Identities=13%  Similarity=0.167  Sum_probs=66.8

Q ss_pred             eEEE-EcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhHHhhhccCCCCCCCee-eeecCC-CCCCCCCcccHHHH
Q 040291            5 HVLV-LPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIR-LVSIPD-GMEPWEDRNDFGKL   81 (160)
Q Consensus         5 ~i~~-~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~l~~-~~~~~~~~~~~~~~   81 (160)
                      ||++ +...|.||+.|.+.++++|.+ ||+|+++++......+..         .++. +...|. .........+....
T Consensus         1 ril~~~~g~G~GH~~r~~ala~~L~~-g~ev~~~~~~~~~~~~~~---------~~~~~~~~~p~~~~~~~~~~~~~~~~   70 (321)
T TIGR00661         1 KILYSVCGEGFGHTTRSVAIGEALKN-DYEVSYIASGRSKNYISK---------YGFKVFETFPGIKLKGEDGKVNIVKT   70 (321)
T ss_pred             CEEEEEeccCccHHHHHHHHHHHHhC-CCeEEEEEcCCHHHhhhh---------hcCcceeccCCceEeecCCcCcHHHH
Confidence            4555 445666999999999999999 999999987763322222         1232 222221 00000000112111


Q ss_pred             HHHHHHhccHHHHHHHHHHhcCCCCCccEEEecCCCccHHHHHHHhCCccEEEccc
Q 040291           82 FEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAWSMEVAKKMNVRGALFWPS  137 (160)
Q Consensus        82 ~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~~  137 (160)
                      ...........+.+..+.+++   .+||+||+| +-+.+..+|+.+|||.+.+..+
T Consensus        71 l~~~~~~~~~~~~~~~~~l~~---~~pDlVi~d-~~~~~~~aA~~~~iP~i~i~~q  122 (321)
T TIGR00661        71 LRNKEYSPKKAIRREINIIRE---YNPDLIISD-FEYSTVVAAKLLKIPVICISNQ  122 (321)
T ss_pred             HHhhccccHHHHHHHHHHHHh---cCCCEEEEC-CchHHHHHHHhcCCCEEEEecc
Confidence            110001101223333333333   689999999 5566678999999999976553

This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.

>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed

Probab=98.62  E-value=6.7e-07  Score=69.70  Aligned_cols=116  Identities=21%  Similarity=0.241  Sum_probs=71.7

Q ss_pred             CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhh-HHhhhccCCCCCCCeeeeecCCC-CCCCCCcccHHHH
Q 040291            4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKR-IMESLEGKNDLGEQIRLVSIPDG-MEPWEDRNDFGKL   81 (160)
Q Consensus         4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~l~~~-~~~~~~~~~~~~~   81 (160)
                      .+|++...+..||+.|.+.++++|.++||+|.|+++....+. +.+        ..++.+..++.. +..   ...+ ..
T Consensus         2 ~~i~~~~GGTGGHi~Pala~a~~l~~~g~~v~~vg~~~~~e~~l~~--------~~g~~~~~~~~~~l~~---~~~~-~~   69 (352)
T PRK12446          2 KKIVFTGGGSAGHVTPNLAIIPYLKEDNWDISYIGSHQGIEKTIIE--------KENIPYYSISSGKLRR---YFDL-KN   69 (352)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEECCCccccccCc--------ccCCcEEEEeccCcCC---CchH-HH
Confidence            368888888899999999999999999999999997654322 111        136777766531 111   1111 11


Q ss_pred             HHHHHHhccH--HHHHHHHHHhcCCCCCccEEEecCCCcc--HHHHHHHhCCccEEEccc
Q 040291           82 FEKVLQVMPG--KLEELIEDINSREDEKLDCFIADGYMAW--SMEVAKKMNVRGALFWPS  137 (160)
Q Consensus        82 ~~~~~~~~~~--~~~~ll~~l~~~~~~~~d~vI~D~~~~~--~~~~A~~lgiP~i~~~~~  137 (160)
                      +.........  ....++++      .+||+||...-...  +...|..+++|.+..-..
T Consensus        70 ~~~~~~~~~~~~~~~~i~~~------~kPdvvi~~Ggy~s~p~~~aa~~~~~p~~i~e~n  123 (352)
T PRK12446         70 IKDPFLVMKGVMDAYVRIRK------LKPDVIFSKGGFVSVPVVIGGWLNRVPVLLHESD  123 (352)
T ss_pred             HHHHHHHHHHHHHHHHHHHh------cCCCEEEecCchhhHHHHHHHHHcCCCEEEECCC
Confidence            1111111111  11223443      68999998654432  466788889999886543

>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]

Probab=98.33  E-value=1.1e-05  Score=62.92  Aligned_cols=117  Identities=20%  Similarity=0.231  Sum_probs=71.2

Q ss_pred             eEEEEcCCCCCChHHHHHHHHHHHhCCC-EEEEEeCCCChhhHHhhhccCCCCCCCeeeeecCCCCCCCC-CcccHHHHH
Q 040291            5 HVLVLPIPAQGHVIPLLEFSQCLAKQGF-RVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIPDGMEPWE-DRNDFGKLF   82 (160)
Q Consensus         5 ~i~~~~~p~~GH~~P~l~la~~L~~rGh-~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~-~~~~~~~~~   82 (160)
                      +|++...++.||+.|.+.++++|.+||+ +|.++.+....+.....       ..++.+..++.+..... ........+
T Consensus         2 ~ivl~~gGTGGHv~pAlAl~~~l~~~g~~~v~~~~~~~~~e~~l~~-------~~~~~~~~I~~~~~~~~~~~~~~~~~~   74 (357)
T COG0707           2 KIVLTAGGTGGHVFPALALAEELAKRGWEQVIVLGTGDGLEAFLVK-------QYGIEFELIPSGGLRRKGSLKLLKAPF   74 (357)
T ss_pred             eEEEEeCCCccchhHHHHHHHHHHhhCccEEEEecccccceeeecc-------ccCceEEEEecccccccCcHHHHHHHH
Confidence            5778888889999999999999999999 57777665543322111       13677777764322111 111121111


Q ss_pred             HHHHHhccHHHHHHHHHHhcCCCCCccEEEecC-CCc-cHHHHHHHhCCccEEEcc
Q 040291           83 EKVLQVMPGKLEELIEDINSREDEKLDCFIADG-YMA-WSMEVAKKMNVRGALFWP  136 (160)
Q Consensus        83 ~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~-~~~-~~~~~A~~lgiP~i~~~~  136 (160)
                      ....  .....+.++++      .+||+||.=. +.+ .+...|..+|||.+.--.
T Consensus        75 ~~~~--~~~~a~~il~~------~kPd~vig~Ggyvs~P~~~Aa~~~~iPv~ihEq  122 (357)
T COG0707          75 KLLK--GVLQARKILKK------LKPDVVIGTGGYVSGPVGIAAKLLGIPVIIHEQ  122 (357)
T ss_pred             HHHH--HHHHHHHHHHH------cCCCEEEecCCccccHHHHHHHhCCCCEEEEec
Confidence            2111  11123456665      6899999743 333 345678888999998644

>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase

Probab=98.14  E-value=6.4e-05  Score=57.88  Aligned_cols=114  Identities=20%  Similarity=0.209  Sum_probs=66.6

Q ss_pred             eEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhHHhhhccCCCCCCCeeeeecCCCCCCCCCcccHHHHHHH
Q 040291            5 HVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIPDGMEPWEDRNDFGKLFEK   84 (160)
Q Consensus         5 ~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~   84 (160)
                      ||+++.....||+.....|+++|.++||+|++++.+.....  ...     ...++++..++..-..   .......+..
T Consensus         2 ~i~~~~g~~~g~~~~~~~La~~L~~~g~eV~vv~~~~~~~~--~~~-----~~~g~~~~~i~~~~~~---~~~~~~~l~~   71 (348)
T TIGR01133         2 KVVLAAGGTGGHIFPALAVAEELIKRGVEVLWLGTKRGLEK--RLV-----PKAGIEFYFIPVGGLR---RKGSFRLIKT   71 (348)
T ss_pred             eEEEEeCccHHHHhHHHHHHHHHHhCCCEEEEEeCCCcchh--ccc-----ccCCCceEEEeccCcC---CCChHHHHHH
Confidence            79999999999999778999999999999999986432110  000     0135666655422100   1112111111


Q ss_pred             HHHhc--cHHHHHHHHHHhcCCCCCccEEEecCCCc--cHHHHHHHhCCccEEE
Q 040291           85 VLQVM--PGKLEELIEDINSREDEKLDCFIADGYMA--WSMEVAKKMNVRGALF  134 (160)
Q Consensus        85 ~~~~~--~~~~~~ll~~l~~~~~~~~d~vI~D~~~~--~~~~~A~~lgiP~i~~  134 (160)
                      .....  ...+.+++++      .+||+|++.....  .+..++...++|.+..
T Consensus        72 ~~~~~~~~~~l~~~i~~------~~pDvVi~~~~~~~~~~~~~~~~~~~p~v~~  119 (348)
T TIGR01133        72 PLKLLKAVFQARRILKK------FKPDAVIGFGGYVSGPAGLAAKLLGIPLFHH  119 (348)
T ss_pred             HHHHHHHHHHHHHHHHh------cCCCEEEEcCCcccHHHHHHHHHcCCCEEEE
Confidence            11111  0123344444      6899999865332  2344677789999863

RL J Bacteriol 1993 Mar;175(6):1841-3

>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional

Probab=98.13  E-value=6.5e-05  Score=58.28  Aligned_cols=115  Identities=17%  Similarity=0.192  Sum_probs=67.8

Q ss_pred             CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhHHhhhccCCCCCCCeeeeecCCCCCCCCCcccHHHHHH
Q 040291            4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIPDGMEPWEDRNDFGKLFE   83 (160)
Q Consensus         4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~   83 (160)
                      ++|+++..+..||...++.|+++|.++||+|++++........  ..     ...++++..++..-...   ......+.
T Consensus         2 ~~i~i~~~g~gG~~~~~~~la~~L~~~g~ev~vv~~~~~~~~~--~~-----~~~g~~~~~~~~~~~~~---~~~~~~l~   71 (357)
T PRK00726          2 KKILLAGGGTGGHVFPALALAEELKKRGWEVLYLGTARGMEAR--LV-----PKAGIEFHFIPSGGLRR---KGSLANLK   71 (357)
T ss_pred             cEEEEEcCcchHhhhHHHHHHHHHHhCCCEEEEEECCCchhhh--cc-----ccCCCcEEEEeccCcCC---CChHHHHH
Confidence            7899998888899999999999999999999999886532111  00     01356666554211011   11111111


Q ss_pred             HHHHhcc--HHHHHHHHHHhcCCCCCccEEEecCCC-cc-HHHHHHHhCCccEEE
Q 040291           84 KVLQVMP--GKLEELIEDINSREDEKLDCFIADGYM-AW-SMEVAKKMNVRGALF  134 (160)
Q Consensus        84 ~~~~~~~--~~~~~ll~~l~~~~~~~~d~vI~D~~~-~~-~~~~A~~lgiP~i~~  134 (160)
                      .......  ..+.+++++      .+||+|++.... .+ +..++...++|.+..
T Consensus        72 ~~~~~~~~~~~~~~~ik~------~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~  120 (357)
T PRK00726         72 APFKLLKGVLQARKILKR------FKPDVVVGFGGYVSGPGGLAARLLGIPLVIH  120 (357)
T ss_pred             HHHHHHHHHHHHHHHHHh------cCCCEEEECCCcchhHHHHHHHHcCCCEEEE
Confidence            1111111  123334433      589999988632 33 345567778999875

>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis

Probab=98.12  E-value=6.3e-05  Score=57.95  Aligned_cols=115  Identities=19%  Similarity=0.215  Sum_probs=67.1

Q ss_pred             eEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhHHhhhccCCCCCCCeeeeecCCCCCCCCC-cccHHHHHH
Q 040291            5 HVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIPDGMEPWED-RNDFGKLFE   83 (160)
Q Consensus         5 ~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~-~~~~~~~~~   83 (160)
                      ||++......||......+++.|.++||+|++++.......  ...     ...++++..++..-..... .........
T Consensus         1 ~~~~~~~~~gG~~~~~~~la~~l~~~G~ev~v~~~~~~~~~--~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   73 (350)
T cd03785           1 RILIAGGGTGGHIFPALALAEELRERGAEVLFLGTKRGLEA--RLV-----PKAGIPLHTIPVGGLRRKGSLKKLKAPFK   73 (350)
T ss_pred             CEEEEecCchhhhhHHHHHHHHHHhCCCEEEEEECCCcchh--hcc-----cccCCceEEEEecCcCCCChHHHHHHHHH
Confidence            57888888889999999999999999999999987543211  110     0135666655432101100 011111111


Q ss_pred             HHHHhccHHHHHHHHHHhcCCCCCccEEEecCCC--ccHHHHHHHhCCccEEE
Q 040291           84 KVLQVMPGKLEELIEDINSREDEKLDCFIADGYM--AWSMEVAKKMNVRGALF  134 (160)
Q Consensus        84 ~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~--~~~~~~A~~lgiP~i~~  134 (160)
                      . .... ..+..++++      .+||+|++..-.  ..+..+|...|+|.+..
T Consensus        74 ~-~~~~-~~~~~~i~~------~~pDvI~~~~~~~~~~~~~~a~~~~~p~v~~  118 (350)
T cd03785          74 L-LKGV-LQARKILKK------FKPDVVVGFGGYVSGPVGLAAKLLGIPLVIH  118 (350)
T ss_pred             H-HHHH-HHHHHHHHh------cCCCEEEECCCCcchHHHHHHHHhCCCEEEE
Confidence            1 1111 123344443      689999976532  23456778889999864

It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.

>TIGR00215 lpxB lipid-A-disaccharide synthase

Probab=98.02  E-value=6.5e-05  Score=59.31  Aligned_cols=111  Identities=11%  Similarity=0.092  Sum_probs=64.8

Q ss_pred             CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhHHhhhccCCCCCCCeeeeecCCCCCCCCCcccHHHHHH
Q 040291            4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIPDGMEPWEDRNDFGKLFE   83 (160)
Q Consensus         4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~   83 (160)
                      ++|++......||+.|. .++++|.++|++++|+.....  .+++.+.     ...+++..++.        ..+.+.+.
T Consensus         6 ~ki~i~aGgtsGhi~pa-al~~~l~~~~~~~~~~g~gg~--~m~~~g~-----~~~~~~~~l~v--------~G~~~~l~   69 (385)
T TIGR00215         6 PTIALVAGEASGDILGA-GLRQQLKEHYPNARFIGVAGP--RMAAEGC-----EVLYSMEELSV--------MGLREVLG   69 (385)
T ss_pred             CeEEEEeCCccHHHHHH-HHHHHHHhcCCCcEEEEEccH--HHHhCcC-----ccccChHHhhh--------ccHHHHHH
Confidence            68999998899999999 999999999999999987643  2333110     01223222221        11111111


Q ss_pred             HHHHhccHHHHHHHHHHhcCCCCCccEEE-ecCCCcc--HHHHHHHhCCccEEE
Q 040291           84 KVLQVMPGKLEELIEDINSREDEKLDCFI-ADGYMAW--SMEVAKKMNVRGALF  134 (160)
Q Consensus        84 ~~~~~~~~~~~~ll~~l~~~~~~~~d~vI-~D~~~~~--~~~~A~~lgiP~i~~  134 (160)
                      .+... ...+.+..+.+++   .+||+|| .|.-...  ....|+.+|||.+..
T Consensus        70 ~~~~~-~~~~~~~~~~l~~---~kPd~vi~~g~~~~~~~~a~aa~~~gip~v~~  119 (385)
T TIGR00215        70 RLGRL-LKIRKEVVQLAKQ---AKPDLLVGIDAPDFNLTKELKKKDPGIKIIYY  119 (385)
T ss_pred             HHHHH-HHHHHHHHHHHHh---cCCCEEEEeCCCCccHHHHHHHhhCCCCEEEE
Confidence            11111 1112223333332   6899998 6853322  233788999999986

Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA

>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=97.51  E-value=0.0044  Score=49.34  Aligned_cols=59  Identities=22%  Similarity=0.223  Sum_probs=42.3

Q ss_pred             CCCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhHHhhhccCCCCCCCeeeeecC
Q 040291            2 NRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIP   66 (160)
Q Consensus         2 ~~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~   66 (160)
                      ++.||.+++.+-.|+-.=+..+|++|+++||+|++++........+..      ...++.++.++
T Consensus         2 ~~~~~~~~~~~~~~~~~R~~~~a~~L~~~G~~V~ii~~~~~~~~~~~~------~~~~v~~~~~~   60 (415)
T cd03816           2 KRKRVCVLVLGDIGRSPRMQYHALSLAKHGWKVDLVGYLETPPHDEIL------SNPNITIHPLP   60 (415)
T ss_pred             CccEEEEEEecccCCCHHHHHHHHHHHhcCceEEEEEecCCCCCHHHh------cCCCEEEEECC
Confidence            467888888888888777889999999999999999875432111100      12578777764

The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.

>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed

Probab=97.51  E-value=0.0015  Score=51.02  Aligned_cols=37  Identities=11%  Similarity=0.161  Sum_probs=32.3

Q ss_pred             CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCC
Q 040291            4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDY   41 (160)
Q Consensus         4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~   41 (160)
                      ++|+++.....||+.|.. ++++|.++++++.++....
T Consensus         2 ~ki~i~~Ggt~G~i~~a~-l~~~L~~~~~~~~~~~~~~   38 (380)
T PRK00025          2 LRIAIVAGEVSGDLLGAG-LIRALKARAPNLEFVGVGG   38 (380)
T ss_pred             ceEEEEecCcCHHHHHHH-HHHHHHhcCCCcEEEEEcc
Confidence            489999999999999998 9999999988888876543

>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=97.46  E-value=0.0044  Score=48.80  Aligned_cols=115  Identities=12%  Similarity=0.120  Sum_probs=61.5

Q ss_pred             eEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhHHhhhccCCCCCCCeeeeecCCCCCCCCCcccHHHHHHH
Q 040291            5 HVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIPDGMEPWEDRNDFGKLFEK   84 (160)
Q Consensus         5 ~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~   84 (160)
                      ||+++---.+   -++.+||++|+++||+|++++........           .+++.+.++...............+..
T Consensus         1 ~il~~~~~~p---~~~~~la~~L~~~G~~v~~~~~~~~~~~~-----------~~v~~~~~~~~~~~~~~~~~~~~~~~~   66 (396)
T cd03818           1 RILFVHQNFP---GQFRHLAPALAAQGHEVVFLTEPNAAPPP-----------GGVRVVRYRPPRGPTSGTHPYLREFEE   66 (396)
T ss_pred             CEEEECCCCc---hhHHHHHHHHHHCCCEEEEEecCCCCCCC-----------CCeeEEEecCCCCCCCCCCccchhHHH
Confidence            4555543333   34788999999999999999887654211           146666665321111111111111111


Q ss_pred             HHHhccHHHHHHHHHHhcCCCCCccEEEecCCCccHHHHHHHh-CCccEEEc
Q 040291           85 VLQVMPGKLEELIEDINSREDEKLDCFIADGYMAWSMEVAKKM-NVRGALFW  135 (160)
Q Consensus        85 ~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~~A~~l-giP~i~~~  135 (160)
                      ........++ .+..+... +.+||+|+....+.++..+.+.+ ++|.+.+.
T Consensus        67 ~~~~~~~~~~-~~~~~~~~-~~~pdvi~~h~~~~~~~~l~~~~~~~~~v~~~  116 (396)
T cd03818          67 AVLRGQAVAR-ALLALRAK-GFRPDVIVAHPGWGETLFLKDVWPDAPLIGYF  116 (396)
T ss_pred             HHHHHHHHHH-HHHHHHhc-CCCCCEEEECCccchhhhHHHhCCCCCEEEEE
Confidence            1111111122 22222221 25899999887766677777775 48888743

ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).

>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG

Probab=97.46  E-value=0.0034  Score=47.48  Aligned_cols=51  Identities=27%  Similarity=0.364  Sum_probs=37.1

Q ss_pred             CCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhHHhhhccCCCCCCCeeeeecCC
Q 040291           11 IPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIPD   67 (160)
Q Consensus        11 ~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~   67 (160)
                      --|.||+.=.+.||++|.++|++|+|++.......... .     ...++.+..+++
T Consensus        11 ~iG~GHv~Rcl~LA~~l~~~g~~v~f~~~~~~~~~~~~-i-----~~~g~~v~~~~~   61 (279)
T TIGR03590        11 EIGLGHVMRCLTLARALHAQGAEVAFACKPLPGDLIDL-L-----LSAGFPVYELPD   61 (279)
T ss_pred             cccccHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHH-H-----HHcCCeEEEecC
Confidence            34679999999999999999999999998764432111 1     014677777654

This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.

>COG4671 Predicted glycosyl transferase [General function prediction only]

Probab=97.24  E-value=0.001  Score=51.47  Aligned_cols=57  Identities=19%  Similarity=0.395  Sum_probs=46.2

Q ss_pred             CCeEEEEc--CCCCCChHHHHHHHHHHHhC--CCEEEEEeCCCChhhHHhhhccCCCCCCCeeeeecCC
Q 040291            3 RPHVLVLP--IPAQGHVIPLLEFSQCLAKQ--GFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIPD   67 (160)
Q Consensus         3 ~~~i~~~~--~p~~GH~~P~l~la~~L~~r--Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~   67 (160)
                      ++||++++  .-|-||+.=.+.+|++|++.  |.+|++++.........        ...+++++.+|.
T Consensus         9 ~~Ri~~Yshd~~GlGHlrR~~~Ia~aLv~d~~~~~Il~IsG~~~~~~F~--------~~~gVd~V~LPs   69 (400)
T COG4671           9 RPRILFYSHDLLGLGHLRRALRIAHALVEDYLGFDILIISGGPPAGGFP--------GPAGVDFVKLPS   69 (400)
T ss_pred             cceEEEEehhhccchHHHHHHHHHHHHhhcccCceEEEEeCCCccCCCC--------CcccCceEecCc
Confidence            45999999  56779999999999999997  99999999876543321        226899999985

>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases

Probab=97.06  E-value=0.0063  Score=47.29  Aligned_cols=110  Identities=15%  Similarity=0.285  Sum_probs=58.3

Q ss_pred             CCChHHHHHHHHHHHhCCCEEEEEeCCCChhhHHhhhccCCCCCCCeeeeecCCCCCCCCCcccHHHHHHHHHHhccHHH
Q 040291           14 QGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIPDGMEPWEDRNDFGKLFEKVLQVMPGKL   93 (160)
Q Consensus        14 ~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (160)
                      .|.-..+..|+++|+++||+|++++...........     ....++.+..++..................+       .
T Consensus        21 GG~~~~~~~l~~~L~~~g~~V~v~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~   88 (398)
T cd03800          21 GGQNVYVLELARALARLGHEVDIFTRRIDDALPPIV-----ELAPGVRVVRVPAGPAEYLPKEELWPYLDEF-------A   88 (398)
T ss_pred             CceeehHHHHHHHHhccCceEEEEEecCCcccCCcc-----ccccceEEEecccccccCCChhhcchhHHHH-------H
Confidence            478889999999999999999999865432211000     0124566655542110000000111111111       1


Q ss_pred             HHHHHHHhcCCCCCccEEEecCCCc--cHHHHHHHhCCccEEEcc
Q 040291           94 EELIEDINSREDEKLDCFIADGYMA--WSMEVAKKMNVRGALFWP  136 (160)
Q Consensus        94 ~~ll~~l~~~~~~~~d~vI~D~~~~--~~~~~A~~lgiP~i~~~~  136 (160)
                      ..+.+.+.... .++|+|+......  .+..++.++|+|++....
T Consensus        89 ~~~~~~~~~~~-~~~Div~~~~~~~~~~~~~~~~~~~~~~i~~~h  132 (398)
T cd03800          89 DDLLRFLRREG-GRPDLIHAHYWDSGLVALLLARRLGIPLVHTFH  132 (398)
T ss_pred             HHHHHHHHhcC-CCccEEEEecCccchHHHHHHhhcCCceEEEee
Confidence            12222222210 2899999765432  245678899999886433

The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.

>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A

Probab=97.04  E-value=0.0013  Score=44.25  Aligned_cols=98  Identities=19%  Similarity=0.216  Sum_probs=45.7

Q ss_pred             HHHHHHHHHHhCCCEEEEEeCCCChhhHHhhhccCCCCCCCeeeeecCCCCCCCCCcccHHHHHHHHHHhccHHHHHHHH
Q 040291           19 PLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIPDGMEPWEDRNDFGKLFEKVLQVMPGKLEELIE   98 (160)
Q Consensus        19 P~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~   98 (160)
                      -+..|+++|+++||+|+++++.........       ...++++..++.....  .........        ..+.+++.
T Consensus         6 ~~~~l~~~L~~~G~~V~v~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~--~~~~~~~~~--------~~~~~~l~   68 (160)
T PF13579_consen    6 YVRELARALAARGHEVTVVTPQPDPEDDEE-------EEDGVRVHRLPLPRRP--WPLRLLRFL--------RRLRRLLA   68 (160)
T ss_dssp             HHHHHHHHHHHTT-EEEEEEE---GGG-SE-------EETTEEEEEE--S-SS--SGGGHCCHH--------HHHHHHCH
T ss_pred             HHHHHHHHHHHCCCEEEEEecCCCCccccc-------ccCCceEEeccCCccc--hhhhhHHHH--------HHHHHHHh
Confidence            367899999999999999997655432111       1146777666522111  000010111        12233331


Q ss_pred             HHhcCCCCCccEEEecCCCc-cHHHHHH-HhCCccEEEccc
Q 040291           99 DINSREDEKLDCFIADGYMA-WSMEVAK-KMNVRGALFWPS  137 (160)
Q Consensus        99 ~l~~~~~~~~d~vI~D~~~~-~~~~~A~-~lgiP~i~~~~~  137 (160)
                      . .+   .++|+|....... +...++. ..++|.+.-.-.
T Consensus        69 ~-~~---~~~Dvv~~~~~~~~~~~~~~~~~~~~p~v~~~h~  105 (160)
T PF13579_consen   69 A-RR---ERPDVVHAHSPTAGLVAALARRRRGIPLVVTVHG  105 (160)
T ss_dssp             H-CT------SEEEEEHHHHHHHHHHHHHHHT--EEEE-SS
T ss_pred             h-hc---cCCeEEEecccchhHHHHHHHHccCCcEEEEECC
Confidence            1 11   6899998665332 2344555 889999986654

>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=97.03  E-value=0.012  Score=44.61  Aligned_cols=30  Identities=23%  Similarity=0.391  Sum_probs=26.3

Q ss_pred             CCChHHHHHHHHHHHhCCCEEEEEeCCCCh
Q 040291           14 QGHVIPLLEFSQCLAKQGFRVTFVNTDYDH   43 (160)
Q Consensus        14 ~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~   43 (160)
                      .|+-.-...++++|.++||+|+++++....
T Consensus        15 gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~   44 (359)
T cd03823          15 GGAEVVAHDLAEALAKRGHEVAVLTAGEDP   44 (359)
T ss_pred             cchHHHHHHHHHHHHhcCCceEEEeCCCCC
Confidence            578888999999999999999999887543

ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).

>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like

Probab=96.98  E-value=0.035  Score=36.90  Aligned_cols=103  Identities=16%  Similarity=0.192  Sum_probs=61.7

Q ss_pred             eEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhHHhhhccCCCCCCCeeeeecCCCCCCCCCcccHHHHHHH
Q 040291            5 HVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIPDGMEPWEDRNDFGKLFEK   84 (160)
Q Consensus         5 ~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~   84 (160)
                      +|+++......|   ...+++.|.++|++|++++.....+....        ..++.+..++.+.      ......+. 
T Consensus         1 KIl~i~~~~~~~---~~~~~~~L~~~g~~V~ii~~~~~~~~~~~--------~~~i~~~~~~~~~------k~~~~~~~-   62 (139)
T PF13477_consen    1 KILLIGNTPSTF---IYNLAKELKKRGYDVHIITPRNDYEKYEI--------IEGIKVIRLPSPR------KSPLNYIK-   62 (139)
T ss_pred             CEEEEecCcHHH---HHHHHHHHHHCCCEEEEEEcCCCchhhhH--------hCCeEEEEecCCC------CccHHHHH-
Confidence            466666555555   56889999999999999999655422221        1578877764221      11112221 


Q ss_pred             HHHhccHHHHHHHHHHhcCCCCCccEEEecCCCc-cH--HHHHHHhC-CccEEEcc
Q 040291           85 VLQVMPGKLEELIEDINSREDEKLDCFIADGYMA-WS--MEVAKKMN-VRGALFWP  136 (160)
Q Consensus        85 ~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~-~~--~~~A~~lg-iP~i~~~~  136 (160)
                      +    . .+..++++      .+||+|.+-...+ +.  ..++...| +|.+....
T Consensus        63 ~----~-~l~k~ik~------~~~DvIh~h~~~~~~~~~~l~~~~~~~~~~i~~~h  107 (139)
T PF13477_consen   63 Y----F-RLRKIIKK------EKPDVIHCHTPSPYGLFAMLAKKLLKNKKVIYTVH  107 (139)
T ss_pred             H----H-HHHHHhcc------CCCCEEEEecCChHHHHHHHHHHHcCCCCEEEEec
Confidence            1    1 23445544      6899998666554 22  23556777 88886544

>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]

Probab=96.87  E-value=0.011  Score=44.63  Aligned_cols=96  Identities=24%  Similarity=0.311  Sum_probs=62.8

Q ss_pred             CeEEEEcCC----CCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhHHhhhccCCCCCCCeeeeecCCCCCCCCCcccHH
Q 040291            4 PHVLVLPIP----AQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIPDGMEPWEDRNDFG   79 (160)
Q Consensus         4 ~~i~~~~~p----~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~   79 (160)
                      +||++++-+    |.||+.=++.||++|.+||..++|++.....+.+.+.+       .++.+...        ...+  
T Consensus         1 M~V~i~~Dgg~~iGmGHV~R~l~LA~~l~k~~~~~~fl~k~~~e~~~~~~~-------~~f~~~~~--------~~~n--   63 (318)
T COG3980           1 MKVLIRCDGGLEIGMGHVMRTLTLARELEKRGFACLFLTKQDIEAIIHKVY-------EGFKVLEG--------RGNN--   63 (318)
T ss_pred             CcEEEEecCCcccCcchhhhHHHHHHHHHhcCceEEEecccchhhhhhhhh-------hhccceee--------eccc--
Confidence            477887744    57999999999999999999999999877554221110       11111000        0000  


Q ss_pred             HHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEecCCCccH---HHHHHHhCCccEEEccch
Q 040291           80 KLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAWS---MEVAKKMNVRGALFWPSS  138 (160)
Q Consensus        80 ~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~---~~~A~~lgiP~i~~~~~~  138 (160)
                                      .+++      .|+|++|.|.....+   ..+..+.+.+.+.|-.-.
T Consensus        64 ----------------~ik~------~k~d~lI~Dsygl~~dd~k~ik~e~~~k~l~fDd~~  103 (318)
T COG3980          64 ----------------LIKE------EKFDLLIFDSYGLNADDFKLIKEEAGSKILIFDDEN  103 (318)
T ss_pred             ----------------cccc------ccCCEEEEeccCCCHHHHHHHHHHhCCcEEEecCCC
Confidence                            2222      588999999877554   457778888888875543

>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase

Probab=96.84  E-value=0.015  Score=46.97  Aligned_cols=41  Identities=22%  Similarity=0.266  Sum_probs=31.3

Q ss_pred             CCCeEEEEcCCC-----CCChHHHHHHHHHHHhCCCEEEEEeCCCC
Q 040291            2 NRPHVLVLPIPA-----QGHVIPLLEFSQCLAKQGFRVTFVNTDYD   42 (160)
Q Consensus         2 ~~~~i~~~~~p~-----~GH~~P~l~la~~L~~rGh~Vt~~~~~~~   42 (160)
                      .++||+++..+.     .|=-+-+..++++|.++||+|+++++...
T Consensus        57 ~~mrI~~~~~~~~~~~~gG~~~~~~~l~~~L~~~G~eV~vlt~~~~  102 (465)
T PLN02871         57 RPRRIALFVEPSPFSYVSGYKNRFQNFIRYLREMGDEVLVVTTDEG  102 (465)
T ss_pred             CCceEEEEECCcCCcccccHHHHHHHHHHHHHHCCCeEEEEecCCC
Confidence            468999885332     24346778999999999999999997643

>PRK10307 putative glycosyl transferase; Provisional

Probab=96.74  E-value=0.025  Score=44.79  Aligned_cols=38  Identities=24%  Similarity=0.218  Sum_probs=26.9

Q ss_pred             CeEEEEcC---CCCC-ChHHHHHHHHHHHhCCCEEEEEeCCC
Q 040291            4 PHVLVLPI---PAQG-HVIPLLEFSQCLAKQGFRVTFVNTDY   41 (160)
Q Consensus         4 ~~i~~~~~---p~~G-H~~P~l~la~~L~~rGh~Vt~~~~~~   41 (160)
                      +||++++.   |-.| =-.-...|+++|.++||+|+++++..
T Consensus         1 mkIlii~~~~~P~~~g~~~~~~~l~~~L~~~G~~V~vit~~~   42 (412)
T PRK10307          1 MKILVYGINYAPELTGIGKYTGEMAEWLAARGHEVRVITAPP   42 (412)
T ss_pred             CeEEEEecCCCCCccchhhhHHHHHHHHHHCCCeEEEEecCC
Confidence            46777763   3222 11235799999999999999999764

>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length

Probab=96.72  E-value=0.036  Score=43.11  Aligned_cols=105  Identities=21%  Similarity=0.184  Sum_probs=64.0

Q ss_pred             CCChHHHHHHHHHHHhCCCEEEEEeCCCCh-hhHHhhhccCCCCCCCeeeeecCCCCCCCCCcccHH-HHHHHHHHhccH
Q 040291           14 QGHVIPLLEFSQCLAKQGFRVTFVNTDYDH-KRIMESLEGKNDLGEQIRLVSIPDGMEPWEDRNDFG-KLFEKVLQVMPG   91 (160)
Q Consensus        14 ~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~   91 (160)
                      .-|+.-+..+.++|.++||+|.+.+-+... ..+...        .++.+..+...-      .+.. ....... .   
T Consensus        10 p~hvhfFk~~I~eL~~~GheV~it~R~~~~~~~LL~~--------yg~~y~~iG~~g------~~~~~Kl~~~~~-R---   71 (335)
T PF04007_consen   10 PAHVHFFKNIIRELEKRGHEVLITARDKDETEELLDL--------YGIDYIVIGKHG------DSLYGKLLESIE-R---   71 (335)
T ss_pred             chHHHHHHHHHHHHHhCCCEEEEEEeccchHHHHHHH--------cCCCeEEEcCCC------CCHHHHHHHHHH-H---
Confidence            349999999999999999999986654322 122222        478877765321      1121 1112111 1   


Q ss_pred             HHHHHHHHHhcCCCCCccEEEecCCCccHHHHHHHhCCccEEEccchHHH
Q 040291           92 KLEELIEDINSREDEKLDCFIADGYMAWSMEVAKKMNVRGALFWPSSAAS  141 (160)
Q Consensus        92 ~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~~~~~~  141 (160)
                       ..++++.+.+   .+||++|+- ....+.-+|.-+|+|.|.|.=..-..
T Consensus        72 -~~~l~~~~~~---~~pDv~is~-~s~~a~~va~~lgiP~I~f~D~e~a~  116 (335)
T PF04007_consen   72 -QYKLLKLIKK---FKPDVAISF-GSPEAARVAFGLGIPSIVFNDTEHAI  116 (335)
T ss_pred             -HHHHHHHHHh---hCCCEEEec-CcHHHHHHHHHhCCCeEEEecCchhh
Confidence             1223333322   589999952 22446669999999999997665443

They are found in archaea and some bacteria and have no known function.

>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases

Probab=96.54  E-value=0.025  Score=42.99  Aligned_cols=29  Identities=21%  Similarity=0.227  Sum_probs=26.6

Q ss_pred             CCChHHHHHHHHHHHhCCCEEEEEeCCCC
Q 040291           14 QGHVIPLLEFSQCLAKQGFRVTFVNTDYD   42 (160)
Q Consensus        14 ~GH~~P~l~la~~L~~rGh~Vt~~~~~~~   42 (160)
                      .|+...+..|+++|.++||+|+++++...
T Consensus        14 ~G~~~~~~~l~~~L~~~g~~v~~~~~~~~   42 (364)
T cd03814          14 NGVVRTLQRLVEHLRARGHEVLVIAPGPF   42 (364)
T ss_pred             cceehHHHHHHHHHHHCCCEEEEEeCCch
Confidence            68999999999999999999999998754

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog

>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=96.54  E-value=0.037  Score=42.10  Aligned_cols=39  Identities=23%  Similarity=0.315  Sum_probs=30.6

Q ss_pred             eEEEEcCCC----CCChHHHHHHHHHHHhCCCEEEEEeCCCCh
Q 040291            5 HVLVLPIPA----QGHVIPLLEFSQCLAKQGFRVTFVNTDYDH   43 (160)
Q Consensus         5 ~i~~~~~p~----~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~   43 (160)
                      ||++++...    .|+-.-...++++|+++||+|++++.....
T Consensus         1 kIl~i~~~~~~~~~G~~~~~~~l~~~L~~~g~~v~~~~~~~~~   43 (394)
T cd03794           1 KILILSQYFPPELGGGAFRTTELAEELVKRGHEVTVITGSPNY   43 (394)
T ss_pred             CEEEEecccCCccCCcceeHHHHHHHHHhCCceEEEEecCCCc
Confidence            355555322    589999999999999999999999876543

wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.

>PRK02261 methylaspartate mutase subunit S; Provisional

Probab=96.54  E-value=0.13  Score=34.79  Aligned_cols=46  Identities=20%  Similarity=0.267  Sum_probs=41.7

Q ss_pred             CCCCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhH
Q 040291            1 MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRI   46 (160)
Q Consensus         1 m~~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~   46 (160)
                      |++++|++.+.++.+|-.-..-++..|.++|++|+++...-..+.+
T Consensus         1 ~~~~~vl~~~~~gD~H~lG~~iv~~~lr~~G~eVi~LG~~vp~e~i   46 (137)
T PRK02261          1 MKKKTVVLGVIGADCHAVGNKILDRALTEAGFEVINLGVMTSQEEF   46 (137)
T ss_pred             CCCCEEEEEeCCCChhHHHHHHHHHHHHHCCCEEEECCCCCCHHHH
Confidence            8899999999999999999999999999999999999887665544

>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=96.52  E-value=0.066  Score=40.23  Aligned_cols=40  Identities=20%  Similarity=0.203  Sum_probs=33.9

Q ss_pred             eEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChh
Q 040291            5 HVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHK   44 (160)
Q Consensus         5 ~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~   44 (160)
                      +|++++....|+......++++|.++||+|++++......
T Consensus         1 kIl~i~~~~~g~~~~~~~l~~~L~~~g~~v~~~~~~~~~~   40 (359)
T cd03808           1 KILHIVTVDGGLYSFRLPLIKALRAAGYEVHVVAPPGDEL   40 (359)
T ss_pred             CeeEEEecchhHHHHHHHHHHHHHhcCCeeEEEecCCCcc
Confidence            4677776678889999999999999999999999876543

cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.

>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria

Probab=96.45  E-value=0.048  Score=38.30  Aligned_cols=94  Identities=12%  Similarity=0.112  Sum_probs=54.3

Q ss_pred             hCCCEEEEEeCCCChhhHHhhhccCCCCCCCeeeeecCCCCCCCCCcccHHHHHHHHHHhccHHHHHHHHHHhcCCCCCc
Q 040291           29 KQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIPDGMEPWEDRNDFGKLFEKVLQVMPGKLEELIEDINSREDEKL  108 (160)
Q Consensus        29 ~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~  108 (160)
                      ++||+|++++........           +|++.+.+...-............++.-..... ...+.+.+|++. +..|
T Consensus         1 q~gh~v~fl~~~~~~~~~-----------~GV~~~~y~~~~~~~~~~~~~~~~~e~~~~rg~-av~~a~~~L~~~-Gf~P   67 (171)
T PF12000_consen    1 QRGHEVVFLTERKRPPIP-----------PGVRVVRYRPPRGPTPGTHPYVRDFEAAVLRGQ-AVARAARQLRAQ-GFVP   67 (171)
T ss_pred             CCCCEEEEEecCCCCCCC-----------CCcEEEEeCCCCCCCCCCCcccccHHHHHHHHH-HHHHHHHHHHHc-CCCC
Confidence            479999999955443221           377777764311111111111111121112222 233445555554 3689


Q ss_pred             cEEEecCCCccHHHHHHHh-CCccEEEc
Q 040291          109 DCFIADGYMAWSMEVAKKM-NVRGALFW  135 (160)
Q Consensus       109 d~vI~D~~~~~~~~~A~~l-giP~i~~~  135 (160)
                      |+||.-.-+..+..+.+.+ ++|.+.+.
T Consensus        68 DvI~~H~GWGe~Lflkdv~P~a~li~Y~   95 (171)
T PF12000_consen   68 DVIIAHPGWGETLFLKDVFPDAPLIGYF   95 (171)
T ss_pred             CEEEEcCCcchhhhHHHhCCCCcEEEEE
Confidence            9999999888889999999 89988853

This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.

>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases

Probab=96.30  E-value=0.078  Score=40.84  Aligned_cols=37  Identities=22%  Similarity=0.441  Sum_probs=30.1

Q ss_pred             eEEEEcCCC-CCChHHHHHHHHHHHhCCCEEEEEeCCC
Q 040291            5 HVLVLPIPA-QGHVIPLLEFSQCLAKQGFRVTFVNTDY   41 (160)
Q Consensus         5 ~i~~~~~p~-~GH~~P~l~la~~L~~rGh~Vt~~~~~~   41 (160)
                      ||++++.|. .|.-.-...+++.|.++||+|++++...
T Consensus         2 ki~~~~~p~~gG~~~~~~~la~~L~~~G~~v~v~~~~~   39 (371)
T cd04962           2 KIGIVCYPTYGGSGVVATELGKALARRGHEVHFITSSR   39 (371)
T ss_pred             ceeEEEEeCCCCccchHHHHHHHHHhcCCceEEEecCC
Confidence            666666544 4777889999999999999999998754

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog

>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant

Probab=96.19  E-value=0.11  Score=46.11  Aligned_cols=124  Identities=15%  Similarity=0.078  Sum_probs=68.2

Q ss_pred             CCChHHHHHHHHHHHhCC--CEEEEEeCCCChhhHHhhhccC---------------CCCCCCeeeeecCCCCCCCC-Cc
Q 040291           14 QGHVIPLLEFSQCLAKQG--FRVTFVNTDYDHKRIMESLEGK---------------NDLGEQIRLVSIPDGMEPWE-DR   75 (160)
Q Consensus        14 ~GH~~P~l~la~~L~~rG--h~Vt~~~~~~~~~~~~~~~~~~---------------~~~~~~i~~~~l~~~~~~~~-~~   75 (160)
                      .|+..=..+||++|+++|  |+|.++|-....+.+...+..+               ....++++++.+|.+..... ..
T Consensus       195 GGq~vYV~ELAraLa~~~gv~~Vdl~TR~~~~~~~~~~y~~p~e~~~~~~~~~~~~~~~~~~g~rIvRip~GP~~~~l~K  274 (1050)
T TIGR02468       195 GGQVKYVVELARALGSMPGVYRVDLLTRQVSSPDVDWSYGEPTEMLTPRSSENDGDEMGESSGAYIIRIPFGPRDKYIPK  274 (1050)
T ss_pred             CChHHHHHHHHHHHHhCCCCCEEEEEeCCcCccccccccCCccccccccccccccccccCCCCeEEEEeccCCCCCCcCH
Confidence            356667799999999998  8999988654322110011000               01235788777776543211 22


Q ss_pred             ccHHHHHHHHHHhccHHHHH----HHHHHhcCCCCCccEEEecCCCc-c-HHHHHHHhCCccEEEccc
Q 040291           76 NDFGKLFEKVLQVMPGKLEE----LIEDINSREDEKLDCFIADGYMA-W-SMEVAKKMNVRGALFWPS  137 (160)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~----ll~~l~~~~~~~~d~vI~D~~~~-~-~~~~A~~lgiP~i~~~~~  137 (160)
                      ..++..+..|.+.+...+.+    +.+.+.......||+|-+-.... . +..+++.+|||.|....+
T Consensus       275 e~L~~~l~ef~d~~l~~~~~~~~~~~~~~~~~~~~~pDvIHaHyw~sG~aa~~L~~~lgVP~V~T~HS  342 (1050)
T TIGR02468       275 EELWPYIPEFVDGALSHIVNMSKVLGEQIGSGHPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHS  342 (1050)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCEEEECcchHHHHHHHHHHhhCCCEEEECcc
Confidence            33444444444433322222    22222110112489998765442 2 467899999998886665

Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.

>TIGR02470 sucr_synth sucrose synthase

Probab=96.15  E-value=0.13  Score=44.46  Aligned_cols=115  Identities=17%  Similarity=0.171  Sum_probs=59.8

Q ss_pred             CCChHHHHHHHHH--------HHhCCC----EEEEEeCCCChhhHHhhhcc---CCCCCCCeeeeecCCCCCCCC-----
Q 040291           14 QGHVIPLLEFSQC--------LAKQGF----RVTFVNTDYDHKRIMESLEG---KNDLGEQIRLVSIPDGMEPWE-----   73 (160)
Q Consensus        14 ~GH~~P~l~la~~--------L~~rGh----~Vt~~~~~~~~~~~~~~~~~---~~~~~~~i~~~~l~~~~~~~~-----   73 (160)
                      .|+..=.++++++        |+++||    +|+++|-...... ...+..   .....++.+++.+|.+.....     
T Consensus       279 GGq~vYV~elaraL~~~~~~~La~~G~~v~~~V~I~TR~~~~~~-~~~~~~~~e~~~~~~~~~I~rvp~g~~~~~~~~~~  357 (784)
T TIGR02470       279 GGQVVYILDQVRALENEMLQRIKLQGLEITPKILIVTRLIPDAE-GTTCNQRLEKVYGTEHAWILRVPFRTENGIILRNW  357 (784)
T ss_pred             CCceeHHHHHHHHHHHHHHHHHHhcCCCccceEEEEecCCCCcc-ccccccccccccCCCceEEEEecCCCCcccccccc
Confidence            4666667777776        578999    7778775432111 000000   001125677777765432211     


Q ss_pred             -CcccHHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEecCCCc-c-HHHHHHHhCCccEEEcc
Q 040291           74 -DRNDFGKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMA-W-SMEVAKKMNVRGALFWP  136 (160)
Q Consensus        74 -~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~-~-~~~~A~~lgiP~i~~~~  136 (160)
                       ...+++..+..+.+.   ..+.+.+..    ..+||+|++-...+ + +..+|+++|||.+....
T Consensus       358 i~k~~l~p~l~~f~~~---~~~~~~~~~----~~~pDlIHahy~d~glva~lla~~lgVP~v~t~H  416 (784)
T TIGR02470       358 ISRFEIWPYLETFAED---AEKEILAEL----QGKPDLIIGNYSDGNLVASLLARKLGVTQCTIAH  416 (784)
T ss_pred             cCHHHHHHHHHHHHHH---HHHHHHHhc----CCCCCEEEECCCchHHHHHHHHHhcCCCEEEECC
Confidence             112333333333322   122222221    14799999876443 2 46789999999776543

This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.

>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=96.10  E-value=0.11  Score=39.44  Aligned_cols=33  Identities=21%  Similarity=0.315  Sum_probs=28.2

Q ss_pred             cCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCC
Q 040291           10 PIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYD   42 (160)
Q Consensus        10 ~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~   42 (160)
                      +....|+-.-...++++|+++||+|+++++...
T Consensus        10 ~p~~~G~~~~~~~l~~~L~~~g~~v~v~~~~~~   42 (374)
T cd03817          10 LPQVNGVATSIRRLAEELEKRGHEVYVVAPSYP   42 (374)
T ss_pred             cCCCCCeehHHHHHHHHHHHcCCeEEEEeCCCC
Confidence            344578999999999999999999999987654

UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.

>PLN00142 sucrose synthase

Probab=95.81  E-value=0.092  Score=45.40  Aligned_cols=108  Identities=17%  Similarity=0.154  Sum_probs=55.5

Q ss_pred             HHHHHHHhCCCEEE----EEeCCCChhhHHhhhcc---CCCCCCCeeeeecCCCCCCCC-----CcccHHHHHHHHHHhc
Q 040291           22 EFSQCLAKQGFRVT----FVNTDYDHKRIMESLEG---KNDLGEQIRLVSIPDGMEPWE-----DRNDFGKLFEKVLQVM   89 (160)
Q Consensus        22 ~la~~L~~rGh~Vt----~~~~~~~~~~~~~~~~~---~~~~~~~i~~~~l~~~~~~~~-----~~~~~~~~~~~~~~~~   89 (160)
                      +++++|+++||+|+    ++|=-..... ...+..   .....++.+++.+|.+...+.     ....++.++..+.+. 
T Consensus       319 el~~~l~~~G~~v~~~v~i~TR~i~~~~-~~~~~~~~e~v~~~~~~~I~rvP~g~~~~~l~~~i~ke~l~p~L~~f~~~-  396 (815)
T PLN00142        319 EMLLRIKQQGLDIKPQILIVTRLIPDAK-GTTCNQRLEKVSGTEHSHILRVPFRTEKGILRKWISRFDVWPYLETFAED-  396 (815)
T ss_pred             HHHHHHHhcCCCccceeEEEEeccCCcc-CCcccCcceeccCCCceEEEecCCCCCccccccccCHHHHHHHHHHHHHH-
Confidence            46688889999875    6553211110 000000   001124667766665432111     112333433333322 


Q ss_pred             cHHHHHHHHHHhcCCCCCccEEEecCCCc-c-HHHHHHHhCCccEEEccc
Q 040291           90 PGKLEELIEDINSREDEKLDCFIADGYMA-W-SMEVAKKMNVRGALFWPS  137 (160)
Q Consensus        90 ~~~~~~ll~~l~~~~~~~~d~vI~D~~~~-~-~~~~A~~lgiP~i~~~~~  137 (160)
                        ..+.+.+..    ..+||+|..-.-.+ + +..+|+++|||.+....+
T Consensus       397 --~~~~~~~~~----~~~PDlIHaHYwdsg~vA~~La~~lgVP~v~T~Hs  440 (815)
T PLN00142        397 --AASEILAEL----QGKPDLIIGNYSDGNLVASLLAHKLGVTQCTIAHA  440 (815)
T ss_pred             --HHHHHHHhc----CCCCCEEEECCccHHHHHHHHHHHhCCCEEEEccc
Confidence              222232321    14799999885543 3 467999999999987654

>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=95.68  E-value=0.2  Score=37.94  Aligned_cols=39  Identities=15%  Similarity=0.249  Sum_probs=29.9

Q ss_pred             CeEEEEcCC--------CCCChHHHHHHHHHHHhCCCEEEEEeCCCC
Q 040291            4 PHVLVLPIP--------AQGHVIPLLEFSQCLAKQGFRVTFVNTDYD   42 (160)
Q Consensus         4 ~~i~~~~~p--------~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~   42 (160)
                      +||++++..        ..|--.-...|+++|.++||+|++++....
T Consensus         1 MkI~~i~~~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~V~v~~~~~~   47 (335)
T cd03802           1 MRIALVAPPREPVPPPAYGGTERVVAALTEGLVARGHEVTLFASGDS   47 (335)
T ss_pred             CeEEEEcCCcccCCCcccCcHHHHHHHHHHHHHhcCceEEEEecCCC
Confidence            477776642        234457789999999999999999997654

aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.

>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=95.59  E-value=0.19  Score=39.59  Aligned_cols=102  Identities=17%  Similarity=0.277  Sum_probs=54.3

Q ss_pred             CChHHHHHHHHHHHhCCCEEEEEeCCCChhhHHhhhccCCCCCCCeeeeecCCCCCCCCCcccHHHHHHHHHHhccHHHH
Q 040291           15 GHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIPDGMEPWEDRNDFGKLFEKVLQVMPGKLE   94 (160)
Q Consensus        15 GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (160)
                      |--.-...++++|+++||+|+++++.........      ....++.+..+|.....  ..........     ....++
T Consensus        15 G~e~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~------~~~~~i~v~~~p~~~~~--~~~~~~~~~~-----~~~~l~   81 (398)
T cd03796          15 GVETHIYQLSQCLIKRGHKVVVITHAYGNRVGIR------YLTNGLKVYYLPFVVFY--NQSTLPTFFG-----TFPLLR   81 (398)
T ss_pred             cHHHHHHHHHHHHHHcCCeeEEEeccCCcCCCcc------cccCceeEEEecceecc--CCccccchhh-----hHHHHH
Confidence            4457789999999999999999997532111000      00135665555421100  0000111111     011233


Q ss_pred             HHHHHHhcCCCCCccEEEecCCC-cc---HHHHHHHhCCccEEEc
Q 040291           95 ELIEDINSREDEKLDCFIADGYM-AW---SMEVAKKMNVRGALFW  135 (160)
Q Consensus        95 ~ll~~l~~~~~~~~d~vI~D~~~-~~---~~~~A~~lgiP~i~~~  135 (160)
                      +.+++      .+||+|-.-... .+   +..+++.+++|.+...
T Consensus        82 ~~~~~------~~~DiIh~~~~~~~~~~~~~~~~~~~~~~~v~t~  120 (398)
T cd03796          82 NILIR------ERITIVHGHQAFSALAHEALLHARTMGLKTVFTD  120 (398)
T ss_pred             HHHHh------cCCCEEEECCCCchHHHHHHHHhhhcCCcEEEEe
Confidence            34433      589998855432 22   3456788999988743

Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.

>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=95.56  E-value=0.26  Score=38.34  Aligned_cols=38  Identities=16%  Similarity=0.169  Sum_probs=27.5

Q ss_pred             CeEEEEcCC-CC-CChHHHHHHHHHHHhCCCEEEEEeCCC
Q 040291            4 PHVLVLPIP-AQ-GHVIPLLEFSQCLAKQGFRVTFVNTDY   41 (160)
Q Consensus         4 ~~i~~~~~p-~~-GH~~P~l~la~~L~~rGh~Vt~~~~~~   41 (160)
                      ++|+++... .. |=-.-...||++|+++||+|+++++..
T Consensus         1 mkIl~~~~~~~~gG~e~~~~~la~~L~~~G~~V~v~~~~~   40 (392)
T cd03805           1 LRVAFIHPDLGIGGAERLVVDAALALQSRGHEVTIYTSHH   40 (392)
T ss_pred             CeEEEECCCCCCchHHHHHHHHHHHHHhCCCeEEEEcCCC
Confidence            367766532 22 333566899999999999999998753

ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.

>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=95.28  E-value=0.56  Score=35.74  Aligned_cols=99  Identities=22%  Similarity=0.234  Sum_probs=56.2

Q ss_pred             CCChHHHHHHHHHHHhCCCEEEEEeCCCChhhHHhhhccCCCCCCCeeeeecCCCCCCCCCcccHHHHHHHHHHhccHHH
Q 040291           14 QGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIPDGMEPWEDRNDFGKLFEKVLQVMPGKL   93 (160)
Q Consensus        14 ~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (160)
                      .|--.-...++++|+++||+|+++++..........        .++++..++..  ..    ........+     ..+
T Consensus        10 gG~e~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~--------~~~~~~~~~~~--~~----~~~~~~~~~-----~~l   70 (355)
T cd03819          10 GGVERGTLELARALVERGHRSLVASAGGRLVAELEA--------EGSRHIKLPFI--SK----NPLRILLNV-----ARL   70 (355)
T ss_pred             CcHHHHHHHHHHHHHHcCCEEEEEcCCCchHHHHHh--------cCCeEEEcccc--cc----chhhhHHHH-----HHH
Confidence            455577889999999999999999876543221111        35665554321  10    111111111     112


Q ss_pred             HHHHHHHhcCCCCCccEEEecCCC-ccH-HHHHHHhCCccEEEccc
Q 040291           94 EELIEDINSREDEKLDCFIADGYM-AWS-MEVAKKMNVRGALFWPS  137 (160)
Q Consensus        94 ~~ll~~l~~~~~~~~d~vI~D~~~-~~~-~~~A~~lgiP~i~~~~~  137 (160)
                      ..+++.      .++|+|+..... .|. ..++..+++|.+.....
T Consensus        71 ~~~~~~------~~~dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~  110 (355)
T cd03819          71 RRLIRE------EKVDIVHARSRAPAWSAYLAARRTRPPFVTTVHG  110 (355)
T ss_pred             HHHHHH------cCCCEEEECCCchhHHHHHHHHhcCCCEEEEeCC
Confidence            333333      589999976533 343 34567789999875543

WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.

>cd02067 B12-binding B12 binding domain (B12-BD)

Probab=95.18  E-value=0.5  Score=30.72  Aligned_cols=41  Identities=22%  Similarity=0.325  Sum_probs=35.0

Q ss_pred             eEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhh
Q 040291            5 HVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKR   45 (160)
Q Consensus         5 ~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~   45 (160)
                      ++++.+.++..|.....-++..|.++|++|..+...-..+.
T Consensus         1 ~vl~~~~~~e~H~lG~~~~~~~l~~~G~~V~~lg~~~~~~~   41 (119)
T cd02067           1 KVVIATVGGDGHDIGKNIVARALRDAGFEVIDLGVDVPPEE   41 (119)
T ss_pred             CEEEEeeCCchhhHHHHHHHHHHHHCCCEEEECCCCCCHHH
Confidence            57899999999999999999999999999988776544433

This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.

>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain

Probab=95.14  E-value=0.32  Score=39.07  Aligned_cols=113  Identities=12%  Similarity=0.168  Sum_probs=54.7

Q ss_pred             ChHHHHHHHHHHHhCCC--EEEEEeCCCChhhHHhhhccC-CCCCCCeeeeecCCCCCCCCCcccHHHHHHHHHHhccHH
Q 040291           16 HVIPLLEFSQCLAKQGF--RVTFVNTDYDHKRIMESLEGK-NDLGEQIRLVSIPDGMEPWEDRNDFGKLFEKVLQVMPGK   92 (160)
Q Consensus        16 H~~P~l~la~~L~~rGh--~Vt~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (160)
                      =-.-+..|+++|+++||  +|+++|...........+... .....++++..++...............+..+    ...
T Consensus        28 ~~~~v~~La~~L~~~G~~~~V~v~t~~~~~~~~~~~~~~~~~~~~~gv~v~r~~~~~~~~~~~~~~~~~~~~~----~~~  103 (439)
T TIGR02472        28 QTKYVLELARALARRSEVEQVDLVTRLIKDAKVSPDYAQPIERIAPGARIVRLPFGPRRYLRKELLWPYLDEL----ADN  103 (439)
T ss_pred             cchHHHHHHHHHHhCCCCcEEEEEeccccCcCCCCccCCCeeEeCCCcEEEEecCCCCCCcChhhhhhhHHHH----HHH
Confidence            33567899999999997  999999532110000000000 00124676666653211100101111111111    112


Q ss_pred             HHHHHHHHhcCCCCCccEEEecCCC-cc-HHHHHHHhCCccEEEcc
Q 040291           93 LEELIEDINSREDEKLDCFIADGYM-AW-SMEVAKKMNVRGALFWP  136 (160)
Q Consensus        93 ~~~ll~~l~~~~~~~~d~vI~D~~~-~~-~~~~A~~lgiP~i~~~~  136 (160)
                      +..++++   .. .+||+|-+-... .+ +..+++.+|+|++...-
T Consensus       104 l~~~~~~---~~-~~~DvIH~h~~~~~~~~~~~~~~~~~p~V~t~H  145 (439)
T TIGR02472       104 LLQHLRQ---QG-HLPDLIHAHYADAGYVGARLSRLLGVPLIFTGH  145 (439)
T ss_pred             HHHHHHH---cC-CCCCEEEEcchhHHHHHHHHHHHhCCCEEEecc
Confidence            3333332   11 369999976533 22 34567888999977554

This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.

>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase

Probab=95.06  E-value=0.29  Score=38.46  Aligned_cols=113  Identities=14%  Similarity=0.095  Sum_probs=58.0

Q ss_pred             CCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhHHhhhccCCCCCCCeeeeecCCCCCCCCCcccHHHHHHHHHHhccHH
Q 040291           13 AQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIPDGMEPWEDRNDFGKLFEKVLQVMPGK   92 (160)
Q Consensus        13 ~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (160)
                      ..|--.-...|+++|+++||+|+++++......-. ..    ....++++..++...-..   .....+...+.......
T Consensus        19 ~GG~e~~v~~la~~L~~~G~~V~v~~~~~~~~~~~-~~----~~~~~~~v~~~~~~~~~~---~~~~~~~~~~~~~~~~~   90 (405)
T TIGR03449        19 AGGMNVYILETATELARRGIEVDIFTRATRPSQPP-VV----EVAPGVRVRNVVAGPYEG---LDKEDLPTQLCAFTGGV   90 (405)
T ss_pred             CCCceehHHHHHHHHhhCCCEEEEEecccCCCCCC-cc----ccCCCcEEEEecCCCccc---CCHHHHHHHHHHHHHHH
Confidence            34666889999999999999999999754321100 00    011466666553211000   01111111111111112


Q ss_pred             HHHHHHHHhcCCCCCccEEEecCCC-cc-HHHHHHHhCCccEEEccc
Q 040291           93 LEELIEDINSREDEKLDCFIADGYM-AW-SMEVAKKMNVRGALFWPS  137 (160)
Q Consensus        93 ~~~ll~~l~~~~~~~~d~vI~D~~~-~~-~~~~A~~lgiP~i~~~~~  137 (160)
                      ++.+++..   . .++|+|-+-... .+ +..+++.+++|+|.....
T Consensus        91 ~~~~~~~~---~-~~~Diih~h~~~~~~~~~~~~~~~~~p~v~t~h~  133 (405)
T TIGR03449        91 LRAEARHE---P-GYYDLIHSHYWLSGQVGWLLRDRWGVPLVHTAHT  133 (405)
T ss_pred             HHHHhhcc---C-CCCCeEEechHHHHHHHHHHHHhcCCCEEEeccc
Confidence            22333321   1 479998755422 22 345677889998876553

Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.

>PRK13609 diacylglycerol glucosyltransferase; Provisional

Probab=94.52  E-value=0.058  Score=42.24  Aligned_cols=38  Identities=26%  Similarity=0.367  Sum_probs=31.8

Q ss_pred             CCeEEEEcCCCC-CChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291            3 RPHVLVLPIPAQ-GHVIPLLEFSQCLAKQGFRVTFVNTD   40 (160)
Q Consensus         3 ~~~i~~~~~p~~-GH~~P~l~la~~L~~rGh~Vt~~~~~   40 (160)
                      .+||++++.... ||..+...|+++|.++||+|.++.+.
T Consensus         4 ~~rili~t~~~G~GH~~~a~al~~~l~~~g~~~~~~~d~   42 (380)
T PRK13609          4 NPKVLILTAHYGNGHVQVAKTLEQTFRQKGIKDVIVCDL   42 (380)
T ss_pred             CCeEEEEEcCCCchHHHHHHHHHHHHHhcCCCcEEEEEh
Confidence            578998885554 99999999999999999987776554

>COG1703 ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism]

Probab=94.40  E-value=0.46  Score=36.43  Aligned_cols=41  Identities=17%  Similarity=0.288  Sum_probs=36.3

Q ss_pred             CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChh
Q 040291            4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHK   44 (160)
Q Consensus         4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~   44 (160)
                      .+|.+.-.|+.|--.-.-.|+++|.+|||+|-++.-+....
T Consensus        52 ~viGITG~PGaGKSTli~~L~~~l~~~G~rVaVlAVDPSSp   92 (323)
T COG1703          52 HVIGITGVPGAGKSTLIEALGRELRERGHRVAVLAVDPSSP   92 (323)
T ss_pred             cEEEecCCCCCchHHHHHHHHHHHHHCCcEEEEEEECCCCC
Confidence            46888889999999999999999999999999998766543

>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known

Probab=94.37  E-value=0.49  Score=35.41  Aligned_cols=30  Identities=27%  Similarity=0.365  Sum_probs=27.0

Q ss_pred             CCChHHHHHHHHHHHhCCCEEEEEeCCCCh
Q 040291           14 QGHVIPLLEFSQCLAKQGFRVTFVNTDYDH   43 (160)
Q Consensus        14 ~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~   43 (160)
                      .|+..-+..+++.|.+.||+|++++.....
T Consensus        14 ~G~~~~~~~l~~~L~~~g~~v~i~~~~~~~   43 (374)
T cd03801          14 GGAERHVLELARALAARGHEVTVLTPGDGG   43 (374)
T ss_pred             CcHhHHHHHHHHHHHhcCceEEEEecCCCC
Confidence            688999999999999999999999987554

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.

>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases

Probab=94.30  E-value=0.58  Score=35.74  Aligned_cols=46  Identities=24%  Similarity=0.226  Sum_probs=31.2

Q ss_pred             CCChHHHHHHHHHHHhCCCEEEEEeCCCChhhHHhhhccCCCCCCCeeeeecC
Q 040291           14 QGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIP   66 (160)
Q Consensus        14 ~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~   66 (160)
                      .|=-.-...++++|.++||+|++++..........       ...++++..++
T Consensus        15 gG~~~~~~~la~~L~~~g~~v~v~~~~~~~~~~~~-------~~~~i~~~~~~   60 (363)
T cd04955          15 GGFETFVEELAPRLVARGHEVTVYCRSPYPKQKET-------EYNGVRLIHIP   60 (363)
T ss_pred             CcHHHHHHHHHHHHHhcCCCEEEEEccCCCCCccc-------ccCCceEEEcC
Confidence            34457778999999999999999987654321111       12467776665

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog

>PLN02275 transferase, transferring glycosyl groups

Probab=94.28  E-value=2.1  Score=33.59  Aligned_cols=126  Identities=13%  Similarity=0.013  Sum_probs=66.5

Q ss_pred             CCeEEEEcCCCCCChHHHHHHHHHHHhCCC-EEEEEeCCCChhhHHhhhccCCCCCCCeeeeecCCCCCCCCCcccHHHH
Q 040291            3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGF-RVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIPDGMEPWEDRNDFGKL   81 (160)
Q Consensus         3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh-~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~   81 (160)
                      +.++.++..+-.|.-.-+..++++|+++|| +||+++........+. .     ...++++..++. .+...........
T Consensus         4 ~~~~~~~~~~~~g~~~r~~~~~~~l~~~~~~~v~vi~~~~~~~~~~~-~-----~~~~v~v~r~~~-~~~~~~~~~~~~~   76 (371)
T PLN02275          4 RGRAAVVVLGDFGRSPRMQYHALSLARQASFQVDVVAYGGSEPIPAL-L-----NHPSIHIHLMVQ-PRLLQRLPRVLYA   76 (371)
T ss_pred             ccEEEEEEecCCCCCHHHHHHHHHHHhcCCceEEEEEecCCCCCHHH-h-----cCCcEEEEECCC-cccccccccchHH
Confidence            456777777888999999999999999986 7999976543221111 0     124677777653 1111111111121


Q ss_pred             HHHHHHhccHHHHHHHHHHhcCCCCCccEEEecC-CCcc----HHHHHHHhCCccEEEccc
Q 040291           82 FEKVLQVMPGKLEELIEDINSREDEKLDCFIADG-YMAW----SMEVAKKMNVRGALFWPS  137 (160)
Q Consensus        82 ~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~-~~~~----~~~~A~~lgiP~i~~~~~  137 (160)
                      +..+.... ..+..++..+... ..+||+|++-. ...+    +..++...++|.++.+..
T Consensus        77 ~~~~~~~~-~~~~~~~~~~~~~-~~~~DvV~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~  135 (371)
T PLN02275         77 LALLLKVA-IQFLMLLWFLCVK-IPRPDVFLVQNPPSVPTLAVVKLACWLRRAKFVIDWHN  135 (371)
T ss_pred             HHHHHHHH-HHHHHHHHHHHhh-CCCCCEEEEeCCCCcHHHHHHHHHHHHhCCCEEEEcCC
Confidence            11111100 0111122211000 16899988643 3222    234566778999886554

>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing

Probab=94.20  E-value=1.3  Score=34.78  Aligned_cols=115  Identities=12%  Similarity=0.105  Sum_probs=62.1

Q ss_pred             eEEEEcCCCCCChHHHHHHHHHHHhC-CCEEEEEeCCCChhh-----HHhhhccCCCCCCCeeeee-cCCCCCCCCCccc
Q 040291            5 HVLVLPIPAQGHVIPLLEFSQCLAKQ-GFRVTFVNTDYDHKR-----IMESLEGKNDLGEQIRLVS-IPDGMEPWEDRND   77 (160)
Q Consensus         5 ~i~~~~~p~~GH~~P~l~la~~L~~r-Gh~Vt~~~~~~~~~~-----~~~~~~~~~~~~~~i~~~~-l~~~~~~~~~~~~   77 (160)
                      +|+++. +.+..+.=+.++.++|.+. ++++.++.|....+.     .....      ..++.... +.-.+.. .....
T Consensus         2 ki~~v~-GtRpe~iklapv~~~l~~~~~~~~~lv~tGqH~~~~~g~~~~~~~------~~~~~~~~~~~~~~~~-~~~~~   73 (365)
T TIGR03568         2 KICVVT-GTRADYGLLRPLLKALQDDPDLELQLIVTGMHLSPEYGNTVNEIE------KDGFDIDEKIEILLDS-DSNAG   73 (365)
T ss_pred             eEEEEE-ecChhHHHHHHHHHHHhcCCCCcEEEEEeCCCCChhhccHHHHHH------HcCCCCCCccccccCC-CCCCC
Confidence            555555 7788888899999999974 789888877644321     11000      01222110 0000110 00112


Q ss_pred             HHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEE--ecCCCcc-HHHHHHHhCCccEEEccc
Q 040291           78 FGKLFEKVLQVMPGKLEELIEDINSREDEKLDCFI--ADGYMAW-SMEVAKKMNVRGALFWPS  137 (160)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI--~D~~~~~-~~~~A~~lgiP~i~~~~~  137 (160)
                      .......    +-..+.+++++      .+||+|+  .|.+... +..+|.++|||++.+.-+
T Consensus        74 ~~~~~~~----~~~~~~~~~~~------~~Pd~vlv~GD~~~~la~alaA~~~~IPv~HveaG  126 (365)
T TIGR03568        74 MAKSMGL----TIIGFSDAFER------LKPDLVVVLGDRFEMLAAAIAAALLNIPIAHIHGG  126 (365)
T ss_pred             HHHHHHH----HHHHHHHHHHH------hCCCEEEEeCCchHHHHHHHHHHHhCCcEEEEECC
Confidence            2121111    11235556655      5789877  4555543 567899999999976443

This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.

>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins

Probab=94.09  E-value=1.3  Score=31.82  Aligned_cols=44  Identities=18%  Similarity=0.200  Sum_probs=37.7

Q ss_pred             CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhH
Q 040291            3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRI   46 (160)
Q Consensus         3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~   46 (160)
                      +.++++.+.++..|-....-++..|.++|++|+.+...-..+.+
T Consensus        82 ~~~vl~~~~~gd~H~lG~~~v~~~l~~~G~~vi~lG~~~p~~~l  125 (201)
T cd02070          82 KGKVVIGTVEGDIHDIGKNLVATMLEANGFEVIDLGRDVPPEEF  125 (201)
T ss_pred             CCeEEEEecCCccchHHHHHHHHHHHHCCCEEEECCCCCCHHHH
Confidence            56899999999999999999999999999999988765544443

A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.

>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=93.91  E-value=0.72  Score=34.35  Aligned_cols=31  Identities=29%  Similarity=0.398  Sum_probs=25.7

Q ss_pred             CCCChHHHHHHHHHHHhCCCEEEEEeCCCCh
Q 040291           13 AQGHVIPLLEFSQCLAKQGFRVTFVNTDYDH   43 (160)
Q Consensus        13 ~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~   43 (160)
                      ..|...-...++++|.++||+|++++.....
T Consensus        12 ~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~   42 (348)
T cd03820          12 AGGAERVLSNLANALAEKGHEVTIISLDKGE   42 (348)
T ss_pred             CCChHHHHHHHHHHHHhCCCeEEEEecCCCC
Confidence            3566677889999999999999999886553

AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.

>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc)

Probab=93.76  E-value=0.2  Score=38.67  Aligned_cols=36  Identities=28%  Similarity=0.432  Sum_probs=27.8

Q ss_pred             EEEEcCCCCCChHHHHHHHHHHHhC-CCEEEEEeCCCC
Q 040291            6 VLVLPIPAQGHVIPLLEFSQCLAKQ-GFRVTFVNTDYD   42 (160)
Q Consensus         6 i~~~~~p~~GH~~P~l~la~~L~~r-Gh~Vt~~~~~~~   42 (160)
                      |++++ +....+.=+.++.++|.++ |+++.++.+...
T Consensus         2 i~~~~-gtr~~~~~~~pl~~~l~~~~~~~~~~~~tg~h   38 (363)
T cd03786           2 ILVVT-GTRPEYIKLAPLIRALKKDPGFELVLVVTGQH   38 (363)
T ss_pred             EEEEE-ecCHHHHHHHHHHHHHhcCCCCCEEEEEeCCC
Confidence            44444 7777788888899999988 999998777543

The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st

>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase

Probab=93.58  E-value=1.3  Score=34.53  Aligned_cols=110  Identities=15%  Similarity=0.159  Sum_probs=60.8

Q ss_pred             eEEEEcCCCCCChHHHHHHHHHHHhC-CCEEEEEeCCCChhhHHhhhccCCCCCCCeee-eecCCCCCCCCCcccHHHHH
Q 040291            5 HVLVLPIPAQGHVIPLLEFSQCLAKQ-GFRVTFVNTDYDHKRIMESLEGKNDLGEQIRL-VSIPDGMEPWEDRNDFGKLF   82 (160)
Q Consensus         5 ~i~~~~~p~~GH~~P~l~la~~L~~r-Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~l~~~~~~~~~~~~~~~~~   82 (160)
                      +|++++ +...++.=+.++.++|.++ +.++.++.|............     .-++.. +.+.  ...  ...+.....
T Consensus         2 ~i~~~~-gtr~~~~~~~p~~~~l~~~~~~~~~~~~tg~h~~~~~~~~~-----~~~i~~~~~~~--~~~--~~~~~~~~~   71 (365)
T TIGR00236         2 KVSIVL-GTRPEAIKMAPLIRALKKYPEIDSYVIVTAQHREMLDQVLD-----LFHLPPDYDLN--IMS--PGQTLGEIT   71 (365)
T ss_pred             eEEEEE-ecCHHHHHHHHHHHHHhhCCCCCEEEEEeCCCHHHHHHHHH-----hcCCCCCeeee--cCC--CCCCHHHHH
Confidence            666655 8889999999999999987 677777776654432221100     012211 1111  101  111121111


Q ss_pred             HHHHHhccHHHHHHHHHHhcCCCCCccEEEe--cCCCc-cHHHHHHHhCCccEEE
Q 040291           83 EKVLQVMPGKLEELIEDINSREDEKLDCFIA--DGYMA-WSMEVAKKMNVRGALF  134 (160)
Q Consensus        83 ~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~--D~~~~-~~~~~A~~lgiP~i~~  134 (160)
                      ...   + ..+.+++++      .+||+|++  |.... ++..+|.++|||++.+
T Consensus        72 ~~~---~-~~l~~~l~~------~~pDiv~~~gd~~~~la~a~aa~~~~ipv~h~  116 (365)
T TIGR00236        72 SNM---L-EGLEELLLE------EKPDIVLVQGDTTTTLAGALAAFYLQIPVGHV  116 (365)
T ss_pred             HHH---H-HHHHHHHHH------cCCCEEEEeCCchHHHHHHHHHHHhCCCEEEE
Confidence            111   1 235556655      58999885  44433 3567889999999865

Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.

>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed

Probab=93.42  E-value=0.37  Score=38.37  Aligned_cols=92  Identities=11%  Similarity=0.095  Sum_probs=53.0

Q ss_pred             CCCCCChHHHHHHHHHHHhCCCEEEE----EeCCCChhhHHhhhccCCCCCCCeeeeecCCCCCCCCCcccHHHHHHHHH
Q 040291           11 IPAQGHVIPLLEFSQCLAKQGFRVTF----VNTDYDHKRIMESLEGKNDLGEQIRLVSIPDGMEPWEDRNDFGKLFEKVL   86 (160)
Q Consensus        11 ~p~~GH~~P~l~la~~L~~rGh~Vt~----~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~   86 (160)
                      ..+.|.+.-..+|+++|.++++++.+    .++.+ .+...+..      ..++.+..+|.+.+                
T Consensus        57 a~s~Ge~~~~~~l~~~l~~~~~~~~i~~t~~t~~~-~~~~~~~~------~~~~~~~~~P~d~~----------------  113 (425)
T PRK05749         57 AVSVGETRAAIPLIRALRKRYPDLPILVTTMTPTG-SERAQALF------GDDVEHRYLPYDLP----------------  113 (425)
T ss_pred             eCCHHHHHHHHHHHHHHHHhCCCCcEEEeCCCccH-HHHHHHhc------CCCceEEEecCCcH----------------
Confidence            45669999999999999998755332    22222 22222111      12444444442211                


Q ss_pred             HhccHHHHHHHHHHhcCCCCCccEEEecC--CCccHHHHHHHhCCccEEEc
Q 040291           87 QVMPGKLEELIEDINSREDEKLDCFIADG--YMAWSMEVAKKMNVRGALFW  135 (160)
Q Consensus        87 ~~~~~~~~~ll~~l~~~~~~~~d~vI~D~--~~~~~~~~A~~lgiP~i~~~  135 (160)
                          ..++.+++.      .+||+++.-.  +++.....+.+.|+|.+...
T Consensus       114 ----~~~~~~l~~------~~Pd~v~~~~~~~~~~~l~~~~~~~ip~vl~~  154 (425)
T PRK05749        114 ----GAVRRFLRF------WRPKLVIIMETELWPNLIAELKRRGIPLVLAN  154 (425)
T ss_pred             ----HHHHHHHHh------hCCCEEEEEecchhHHHHHHHHHCCCCEEEEe
Confidence                134455655      6899988432  23334456788999998864

>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases

Probab=93.28  E-value=2.4  Score=32.18  Aligned_cols=31  Identities=16%  Similarity=0.244  Sum_probs=26.7

Q ss_pred             CCCChHHHHHHHHHHHhCCCEEEEEeCCCCh
Q 040291           13 AQGHVIPLLEFSQCLAKQGFRVTFVNTDYDH   43 (160)
Q Consensus        13 ~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~   43 (160)
                      ..|.-.-...++++|.++||+|++++.....
T Consensus        13 ~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~   43 (357)
T cd03795          13 RGGIEQVIRDLAEGLAARGIEVAVLCASPEP   43 (357)
T ss_pred             CCcHHHHHHHHHHHHHhCCCceEEEecCCCC
Confidence            5578888899999999999999999887544

Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog

>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=93.16  E-value=1.9  Score=32.82  Aligned_cols=39  Identities=13%  Similarity=0.223  Sum_probs=30.3

Q ss_pred             eEEEEcC--CCCCChHHHHHHHHHHHhCCCEEEEEeCCCCh
Q 040291            5 HVLVLPI--PAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDH   43 (160)
Q Consensus         5 ~i~~~~~--p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~   43 (160)
                      ||+++..  ...|.-.-...++++|.++||+|++++.....
T Consensus         1 kIl~~~~~~~~GG~~~~~~~l~~~L~~~~~~v~~i~~~~~~   41 (358)
T cd03812           1 KILHIVGTMNRGGIETFIMNYYRNLDRSKIQFDFLVTSKEE   41 (358)
T ss_pred             CEEEEeCCCCCccHHHHHHHHHHhcCccceEEEEEEeCCCC
Confidence            3454443  45688888999999999999999999976544

capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).

>PLN02846 digalactosyldiacylglycerol synthase

Probab=92.89  E-value=0.22  Score=40.51  Aligned_cols=40  Identities=28%  Similarity=0.336  Sum_probs=31.7

Q ss_pred             CCCeEEEEcC---CCC-CChHHHHHHHHHHHhCC-CEEEEEeCCC
Q 040291            2 NRPHVLVLPI---PAQ-GHVIPLLEFSQCLAKQG-FRVTFVNTDY   41 (160)
Q Consensus         2 ~~~~i~~~~~---p~~-GH~~P~l~la~~L~~rG-h~Vt~~~~~~   41 (160)
                      +++||++++-   |.. |=..-.+.++..|+++| |+|+++.+..
T Consensus         3 ~~mrIaivTdt~lP~vnGva~s~~~~a~~L~~~G~heV~vvaP~~   47 (462)
T PLN02846          3 KKQHIAIFTTASLPWMTGTAVNPLFRAAYLAKDGDREVTLVIPWL   47 (462)
T ss_pred             CCCEEEEEEcCCCCCCCCeeccHHHHHHHHHhcCCcEEEEEecCC
Confidence            4689999984   444 55477788888999999 8999998854

>COG1817 Uncharacterized protein conserved in archaea [Function unknown]

Probab=92.80  E-value=3  Score=32.30  Aligned_cols=108  Identities=21%  Similarity=0.168  Sum_probs=66.4

Q ss_pred             CCCCChHHHHHHHHHHHhCCCEEEEEeCCCC-hhhHHhhhccCCCCCCCeeeeecCCCCCCCCCcccHH-HHHHHHHHhc
Q 040291           12 PAQGHVIPLLEFSQCLAKQGFRVTFVNTDYD-HKRIMESLEGKNDLGEQIRLVSIPDGMEPWEDRNDFG-KLFEKVLQVM   89 (160)
Q Consensus        12 p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~-~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~   89 (160)
                      .-.-|+.-+-.+.++|.++||+|.+.+-+.. ...+.+.        -|+++..+...  .+   ..+. .+.....+. 
T Consensus         8 ~n~~hvhfFk~lI~elekkG~ev~iT~rd~~~v~~LLd~--------ygf~~~~Igk~--g~---~tl~~Kl~~~~eR~-   73 (346)
T COG1817           8 GNPPHVHFFKNLIWELEKKGHEVLITCRDFGVVTELLDL--------YGFPYKSIGKH--GG---VTLKEKLLESAERV-   73 (346)
T ss_pred             CCcchhhHHHHHHHHHHhCCeEEEEEEeecCcHHHHHHH--------hCCCeEeeccc--CC---ccHHHHHHHHHHHH-
Confidence            4456888899999999999999987554432 2223232        36776665421  10   1122 122222111 


Q ss_pred             cHHHHHHHHHHhcCCCCCccEEEecCCCccHHHHHHHhCCccEEEccchHHH
Q 040291           90 PGKLEELIEDINSREDEKLDCFIADGYMAWSMEVAKKMNVRGALFWPSSAAS  141 (160)
Q Consensus        90 ~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~~~~~~  141 (160)
                       -.+.++...      .+||+.+. -..+.+.-+|--+|+|.|.|.-..-+.
T Consensus        74 -~~L~ki~~~------~kpdv~i~-~~s~~l~rvafgLg~psIi~~D~ehA~  117 (346)
T COG1817          74 -YKLSKIIAE------FKPDVAIG-KHSPELPRVAFGLGIPSIIFVDNEHAE  117 (346)
T ss_pred             -HHHHHHHhh------cCCceEee-cCCcchhhHHhhcCCceEEecCChhHH
Confidence             123344443      68999998 566778889999999999997655443

>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A

Probab=92.48  E-value=0.19  Score=34.01  Aligned_cols=30  Identities=30%  Similarity=0.432  Sum_probs=23.4

Q ss_pred             CCChHHHHHHHHHHHhCCCEEEEEeCCCCh
Q 040291           14 QGHVIPLLEFSQCLAKQGFRVTFVNTDYDH   43 (160)
Q Consensus        14 ~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~   43 (160)
                      .|=-.-...|+++|+++||+|+++++....
T Consensus        12 GG~e~~~~~l~~~l~~~G~~v~v~~~~~~~   41 (177)
T PF13439_consen   12 GGAERVVLNLARALAKRGHEVTVVSPGVKD   41 (177)
T ss_dssp             SHHHHHHHHHHHHHHHTT-EEEEEESS-TT
T ss_pred             ChHHHHHHHHHHHHHHCCCEEEEEEcCCCc
Confidence            355577899999999999999999876543

>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=91.82  E-value=1.9  Score=32.35  Aligned_cols=31  Identities=29%  Similarity=0.275  Sum_probs=27.4

Q ss_pred             CCCChHHHHHHHHHHHhCCCEEEEEeCCCCh
Q 040291           13 AQGHVIPLLEFSQCLAKQGFRVTFVNTDYDH   43 (160)
Q Consensus        13 ~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~   43 (160)
                      ..|+-.-...+++.|.+.||+|++++.....
T Consensus        13 ~~g~~~~~~~~~~~l~~~g~~v~v~~~~~~~   43 (377)
T cd03798          13 NGGGGIFVKELARALAKRGVEVTVLAPGPWG   43 (377)
T ss_pred             CchHHHHHHHHHHHHHHCCCceEEEecCCCC
Confidence            4788899999999999999999999987654

wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.

>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli

Probab=91.59  E-value=0.25  Score=37.69  Aligned_cols=36  Identities=11%  Similarity=0.235  Sum_probs=28.7

Q ss_pred             EEEEcC--CCCCChHHHHHHHHHHHhCCCEEEEEeCCC
Q 040291            6 VLVLPI--PAQGHVIPLLEFSQCLAKQGFRVTFVNTDY   41 (160)
Q Consensus         6 i~~~~~--p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~   41 (160)
                      |+++..  ...|+......|+++|.++||+|++++...
T Consensus         2 il~~~~~~~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~   39 (360)
T cd04951           2 ILYVITGLGLGGAEKQVVDLADQFVAKGHQVAIISLTG   39 (360)
T ss_pred             eEEEecCCCCCCHHHHHHHHHHhcccCCceEEEEEEeC
Confidence            455543  346889999999999999999999987543

In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have

>PF02441 Flavoprotein: Flavoprotein; InterPro: IPR003382 This entry contains a diverse range of flavoprotein enzymes, including epidermin biosynthesis protein, EpiD, which has been shown to be a flavoprotein that binds FMN []

Probab=91.53  E-value=0.34  Score=32.21  Aligned_cols=43  Identities=12%  Similarity=0.126  Sum_probs=33.3

Q ss_pred             CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhHH
Q 040291            4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIM   47 (160)
Q Consensus         4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~   47 (160)
                      +||++.-.++.+=+. ...+.++|.++|++|+++.++.-.+.+.
T Consensus         1 k~i~l~vtGs~~~~~-~~~~l~~L~~~g~~v~vv~S~~A~~~~~   43 (129)
T PF02441_consen    1 KRILLGVTGSIAAYK-APDLLRRLKRAGWEVRVVLSPSAERFVT   43 (129)
T ss_dssp             -EEEEEE-SSGGGGG-HHHHHHHHHTTTSEEEEEESHHHHHHSH
T ss_pred             CEEEEEEECHHHHHH-HHHHHHHHhhCCCEEEEEECCcHHHHhh
Confidence            477777777766666 9999999999999999999987655443

This enzyme catalyzes the removal of two reducing equivalents from the cysteine residue of the C-terminal meso-lanthionine of epidermin to form a --C==C-- double bond. This family also includes the B chain of dipicolinate synthase a small polar molecule that accumulates to high concentrations in bacterial endospores, and is thought to play a role in spore heat resistance, or the maintenance of heat resistance []. Dipicolinate synthase catalyses the formation of dipicolinic acid from dihydroxydipicolinic acid. This family also includes phenylacrylic acid decarboxylase 4.1.1 from EC [].; GO: 0003824 catalytic activity; PDB: 3QJG_L 1G63_G 1G5Q_L 1P3Y_1 1QZU_A 1E20_A 1MVN_A 1MVL_A 3ZQU_A 2EJB_A ....

>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=91.43  E-value=0.38  Score=36.72  Aligned_cols=39  Identities=18%  Similarity=0.215  Sum_probs=31.9

Q ss_pred             CeEEEEcCC-C-CCChHHHHHHHHHHHhCCCEEEEEeCCCC
Q 040291            4 PHVLVLPIP-A-QGHVIPLLEFSQCLAKQGFRVTFVNTDYD   42 (160)
Q Consensus         4 ~~i~~~~~p-~-~GH~~P~l~la~~L~~rGh~Vt~~~~~~~   42 (160)
                      +||+++... + .|+-.-...++++|.++||+|++++....
T Consensus         1 MkIl~~~~~~~~gG~~~~~~~l~~~l~~~G~~v~v~~~~~~   41 (365)
T cd03825           1 MKVLHLNTSDISGGAARAAYRLHRALQAAGVDSTMLVQEKK   41 (365)
T ss_pred             CeEEEEecCCCCCcHHHHHHHHHHHHHhcCCceeEEEeecc
Confidence            467777633 3 68889999999999999999999987654

wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.

>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional

Probab=91.17  E-value=4.7  Score=31.31  Aligned_cols=44  Identities=9%  Similarity=0.095  Sum_probs=38.6

Q ss_pred             CeEEEEcCCCCCChHHHHHHHHHHHhC--CCEEEEEeCCCChhhHH
Q 040291            4 PHVLVLPIPAQGHVIPLLEFSQCLAKQ--GFRVTFVNTDYDHKRIM   47 (160)
Q Consensus         4 ~~i~~~~~p~~GH~~P~l~la~~L~~r--Gh~Vt~~~~~~~~~~~~   47 (160)
                      +||+++-..+.|++.-..++.++|.++  +.+|++++.+...+.++
T Consensus         1 mrILii~~~~iGD~il~tP~l~~Lk~~~P~a~I~~l~~~~~~~l~~   46 (348)
T PRK10916          1 MKILVIGPSWVGDMMMSQSLYRTLKARYPQAIIDVMAPAWCRPLLS   46 (348)
T ss_pred             CcEEEEccCcccHHHhHHHHHHHHHHHCCCCeEEEEechhhHHHHh
Confidence            379999999999999999999999996  89999999877665543

>PRK05986 cob(I)alamin adenolsyltransferase/cobinamide ATP-dependent adenolsyltransferase; Validated

Probab=91.16  E-value=4.3  Score=29.12  Aligned_cols=38  Identities=13%  Similarity=0.153  Sum_probs=34.5

Q ss_pred             CCCCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEe
Q 040291            1 MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVN   38 (160)
Q Consensus         1 m~~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~   38 (160)
                      |++..|.+++.++.|=....+.++-+.+.+|++|.++-
T Consensus        20 ~~~g~v~v~~g~GkGKtt~a~g~a~ra~g~G~~V~ivQ   57 (191)
T PRK05986         20 EEKGLLIVHTGNGKGKSTAAFGMALRAVGHGKKVGVVQ   57 (191)
T ss_pred             ccCCeEEEECCCCCChHHHHHHHHHHHHHCCCeEEEEE
Confidence            45678999999999999999999999999999999874

>PRK01175 phosphoribosylformylglycinamidine synthase I; Provisional

Probab=91.07  E-value=5.1  Score=30.16  Aligned_cols=58  Identities=19%  Similarity=0.223  Sum_probs=40.3

Q ss_pred             CCCCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhHHhhhccCCCCCCCeeeeecCCCC
Q 040291            1 MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIPDGM   69 (160)
Q Consensus         1 m~~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~   69 (160)
                      |.++||+++.+|+...-.   +..++|.++|.++.++......+.. ..       ...++.+.+|.+.
T Consensus         1 ~~~~kvaVl~~pG~n~d~---e~~~Al~~aG~~v~~v~~~~~~~~~-~~-------l~~~DgLvipGGf   58 (261)
T PRK01175          1 MESIRVAVLRMEGTNCED---ETVKAFRRLGVEPEYVHINDLAAER-KS-------VSDYDCLVIPGGF   58 (261)
T ss_pred             CCCCEEEEEeCCCCCCHH---HHHHHHHHCCCcEEEEeeccccccc-cc-------hhhCCEEEECCCC
Confidence            778999999999987554   5678999999999988764321110 00       1357777777664

>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]

Probab=91.01  E-value=1.3  Score=35.03  Aligned_cols=118  Identities=17%  Similarity=0.216  Sum_probs=67.8

Q ss_pred             CCCCeEEEEcCCCCCChHHHHHHHHHHHhCC-CEEEEEeCCCChh-hHHhhhccCCCCCCCeeeeecCCC-CCCCCCccc
Q 040291            1 MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQG-FRVTFVNTDYDHK-RIMESLEGKNDLGEQIRLVSIPDG-MEPWEDRND   77 (160)
Q Consensus         1 m~~~~i~~~~~p~~GH~~P~l~la~~L~~rG-h~Vt~~~~~~~~~-~~~~~~~~~~~~~~~i~~~~l~~~-~~~~~~~~~   77 (160)
                      |.+.+|+++. +.+--+.=+.++.+++.+.+ .+..++.|....+ .+...+-    ...++..   |+- +.......+
T Consensus         1 m~~~Kv~~I~-GTRPE~iKmapli~~~~~~~~~~~~vi~TGQH~d~em~~~~l----e~~~i~~---pdy~L~i~~~~~t   72 (383)
T COG0381           1 MKMLKVLTIF-GTRPEAIKMAPLVKALEKDPDFELIVIHTGQHRDYEMLDQVL----ELFGIRK---PDYDLNIMKPGQT   72 (383)
T ss_pred             CCceEEEEEE-ecCHHHHHHhHHHHHHHhCCCCceEEEEecccccHHHHHHHH----HHhCCCC---CCcchhccccCCC
Confidence            6666776665 88888999999999999987 7777777765542 2211110    0012221   110 100001122


Q ss_pred             HHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEE--ecCCCccH-HHHHHHhCCccEEEcc
Q 040291           78 FGKLFEKVLQVMPGKLEELIEDINSREDEKLDCFI--ADGYMAWS-MEVAKKMNVRGALFWP  136 (160)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI--~D~~~~~~-~~~A~~lgiP~i~~~~  136 (160)
                      +.+.   . ...-..+.+++++      .+||+|+  .|.....+ +.+|.+.+||+..+-.
T Consensus        73 l~~~---t-~~~i~~~~~vl~~------~kPD~VlVhGDT~t~lA~alaa~~~~IpV~HvEA  124 (383)
T COG0381          73 LGEI---T-GNIIEGLSKVLEE------EKPDLVLVHGDTNTTLAGALAAFYLKIPVGHVEA  124 (383)
T ss_pred             HHHH---H-HHHHHHHHHHHHh------hCCCEEEEeCCcchHHHHHHHHHHhCCceEEEec
Confidence            2221   1 1111246667766      6899877  67766554 6788899999988643

>COG2185 Sbm Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) [Lipid metabolism]

Probab=90.43  E-value=0.95  Score=30.80  Aligned_cols=43  Identities=28%  Similarity=0.293  Sum_probs=38.0

Q ss_pred             CCCCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCCh
Q 040291            1 MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDH   43 (160)
Q Consensus         1 m~~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~   43 (160)
                      |+++||++.+.+.-||-.-.--+++.|++.|++|.........
T Consensus        10 g~rprvlvak~GlDgHd~gakvia~~l~d~GfeVi~~g~~~tp   52 (143)
T COG2185          10 GARPRVLVAKLGLDGHDRGAKVIARALADAGFEVINLGLFQTP   52 (143)
T ss_pred             CCCceEEEeccCccccccchHHHHHHHHhCCceEEecCCcCCH
Confidence            4789999999999999999999999999999999986655443

>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=90.28  E-value=0.59  Score=35.30  Aligned_cols=31  Identities=39%  Similarity=0.427  Sum_probs=27.3

Q ss_pred             CCCChHHHHHHHHHHHhCCCEEEEEeCCCCh
Q 040291           13 AQGHVIPLLEFSQCLAKQGFRVTFVNTDYDH   43 (160)
Q Consensus        13 ~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~   43 (160)
                      ..|...-...++++|.++||+|+++++....
T Consensus        13 ~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~   43 (375)
T cd03821          13 YGGPVRVVLNLSKALAKLGHEVTVATTDAGG   43 (375)
T ss_pred             cCCeehHHHHHHHHHHhcCCcEEEEecCCCC
Confidence            4689999999999999999999999886543

Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.

>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose

Probab=90.23  E-value=2.4  Score=32.96  Aligned_cols=37  Identities=16%  Similarity=0.079  Sum_probs=27.3

Q ss_pred             EEEEc--CCCCCChHHHHHHHHHHHhCCCEEEEEeCCCC
Q 040291            6 VLVLP--IPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYD   42 (160)
Q Consensus         6 i~~~~--~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~   42 (160)
                      |+++.  ..+.|=-.-...+++.|.+.||+|+++++...
T Consensus         2 i~~~~~~~~~GGv~~~~~~l~~~l~~~g~~v~~~~~~~~   40 (372)
T cd03792           2 VLHVNSTPYGGGVAEILHSLVPLMRDLGVDTRWEVIKGD   40 (372)
T ss_pred             eEEEeCCCCCCcHHHHHHHHHHHHHHcCCCceEEecCCC
Confidence            44443  34445567777999999999999999887543

The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.

>TIGR00087 surE 5'/3'-nucleotidase SurE

Probab=90.19  E-value=4.3  Score=30.25  Aligned_cols=26  Identities=23%  Similarity=0.261  Sum_probs=20.7

Q ss_pred             HHHHHHHHHHhCCCEEEEEeCCCChhh
Q 040291           19 PLLEFSQCLAKQGFRVTFVNTDYDHKR   45 (160)
Q Consensus        19 P~l~la~~L~~rGh~Vt~~~~~~~~~~   45 (160)
                      -+..|.++|.+.| +|+++.+...+..
T Consensus        15 Gi~aL~~~l~~~g-~V~VvAP~~~~Sg   40 (244)
T TIGR00087        15 GIRALYQALKELG-EVTVVAPARQRSG   40 (244)
T ss_pred             hHHHHHHHHHhCC-CEEEEeCCCCccc
Confidence            3567889999988 9999999876543

E. coli SurE is Recommended cutoffs are 15 for homology, 40 for probable orthology, and 200 for orthology with full-length homology.

>PRK08305 spoVFB dipicolinate synthase subunit B; Reviewed

Probab=90.15  E-value=0.55  Score=33.77  Aligned_cols=42  Identities=10%  Similarity=-0.071  Sum_probs=31.4

Q ss_pred             CCCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCCh
Q 040291            2 NRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDH   43 (160)
Q Consensus         2 ~~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~   43 (160)
                      +.+||++.-.++.|=+.-...++++|.++|++|+++.|+...
T Consensus         4 ~~k~IllgVTGsiaa~k~a~~lir~L~k~G~~V~vv~T~aA~   45 (196)
T PRK08305          4 KGKRIGFGLTGSHCTYDEVMPEIEKLVDEGAEVTPIVSYTVQ   45 (196)
T ss_pred             CCCEEEEEEcCHHHHHHHHHHHHHHHHhCcCEEEEEECHhHH
Confidence            456777666554444333699999999999999999988654

>PF02951 GSH-S_N: Prokaryotic glutathione synthetase, N-terminal domain; InterPro: IPR004215 Prokaryotic glutathione synthetase 6

Probab=89.79  E-value=0.79  Score=30.24  Aligned_cols=39  Identities=8%  Similarity=0.028  Sum_probs=27.1

Q ss_pred             CeEEEEcCCCCC---ChHHHHHHHHHHHhCCCEEEEEeCCCC
Q 040291            4 PHVLVLPIPAQG---HVIPLLEFSQCLAKQGFRVTFVNTDYD   42 (160)
Q Consensus         4 ~~i~~~~~p~~G---H~~P~l~la~~L~~rGh~Vt~~~~~~~   42 (160)
                      ++|+|+--|..+   .-.....++++-++|||+|.++...+.
T Consensus         1 Mki~fvmDpi~~i~~~kDTT~alm~eAq~RGhev~~~~~~dL   42 (119)
T PF02951_consen    1 MKIAFVMDPIESIKPYKDTTFALMLEAQRRGHEVFYYEPGDL   42 (119)
T ss_dssp             -EEEEEES-GGG--TTT-HHHHHHHHHHHTT-EEEEE-GGGE
T ss_pred             CeEEEEeCCHHHCCCCCChHHHHHHHHHHCCCEEEEEEcCcE
Confidence            367777666655   346788999999999999999988764

3.2.3 from EC (glutathione synthase) catalyses the conversion of gamma-L-glutamyl-L-cysteine and glycine to orthophosphate and glutathione in the presence of ATP. This is the second step in glutathione biosynthesis. The enzyme is inhibited by 7,8-dihydrofolate, methotrexate and trimethoprim. This domain is the N terminus of the enzyme.; GO: 0004363 glutathione synthase activity, 0006750 glutathione biosynthetic process; PDB: 1GLV_A 1GSA_A 1GSH_A 2GLT_A.

>COG0496 SurE Predicted acid phosphatase [General function prediction only]

Probab=89.72  E-value=2.3  Score=31.78  Aligned_cols=26  Identities=23%  Similarity=0.364  Sum_probs=20.6

Q ss_pred             HHHHHHHHHHhCCCEEEEEeCCCChhh
Q 040291           19 PLLEFSQCLAKQGFRVTFVNTDYDHKR   45 (160)
Q Consensus        19 P~l~la~~L~~rGh~Vt~~~~~~~~~~   45 (160)
                      =+..|+++|. .+++||++.+...+..
T Consensus        15 Gi~aL~~al~-~~~dV~VVAP~~~qSg   40 (252)
T COG0496          15 GIRALARALR-EGADVTVVAPDREQSG   40 (252)
T ss_pred             HHHHHHHHHh-hCCCEEEEccCCCCcc
Confidence            3567788888 9999999999876643

>PRK13932 stationary phase survival protein SurE; Provisional

Probab=89.61  E-value=2.9  Score=31.42  Aligned_cols=41  Identities=27%  Similarity=0.318  Sum_probs=27.2

Q ss_pred             CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhh
Q 040291            3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKR   45 (160)
Q Consensus         3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~   45 (160)
                      ++||++.-==|. |---+..|+++|.+.| +|+++.+...+..
T Consensus         5 ~M~ILltNDDGi-~a~Gi~aL~~~l~~~g-~V~VvAP~~~~Sg   45 (257)
T PRK13932          5 KPHILVCNDDGI-EGEGIHVLAASMKKIG-RVTVVAPAEPHSG   45 (257)
T ss_pred             CCEEEEECCCCC-CCHHHHHHHHHHHhCC-CEEEEcCCCCCCC
Confidence            567776652221 1234677888998888 7999998876543

>PRK00654 glgA glycogen synthase; Provisional

Probab=89.61  E-value=0.67  Score=37.58  Aligned_cols=37  Identities=19%  Similarity=0.196  Sum_probs=27.2

Q ss_pred             CeEEEEcC---CC---CCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291            4 PHVLVLPI---PA---QGHVIPLLEFSQCLAKQGFRVTFVNTD   40 (160)
Q Consensus         4 ~~i~~~~~---p~---~GH~~P~l~la~~L~~rGh~Vt~~~~~   40 (160)
                      +||+++++   |.   .|--.-.-.|+++|+++||+|+++++.
T Consensus         1 m~i~~vs~e~~P~~k~GGl~~~v~~L~~~L~~~G~~V~v~~p~   43 (466)
T PRK00654          1 MKILFVASECAPLIKTGGLGDVVGALPKALAALGHDVRVLLPG   43 (466)
T ss_pred             CeEEEEEcccccCcccCcHHHHHHHHHHHHHHCCCcEEEEecC
Confidence            35666552   22   244466689999999999999999975

>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional

Probab=89.47  E-value=4.2  Score=31.14  Aligned_cols=43  Identities=16%  Similarity=0.158  Sum_probs=37.9

Q ss_pred             CeEEEEcCCCCCChHHHHHHHHHHHhC--CCEEEEEeCCCChhhH
Q 040291            4 PHVLVLPIPAQGHVIPLLEFSQCLAKQ--GFRVTFVNTDYDHKRI   46 (160)
Q Consensus         4 ~~i~~~~~p~~GH~~P~l~la~~L~~r--Gh~Vt~~~~~~~~~~~   46 (160)
                      +||+++-..+.|++.-..++.+.|.++  +.+||+++.+.+...+
T Consensus         1 m~ILii~~~~iGD~v~~~p~~~~lk~~~P~a~I~~l~~~~~~~l~   45 (322)
T PRK10964          1 MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIQFDWVVEEGFAQIP   45 (322)
T ss_pred             CeEEEEeccchHHHHhHHHHHHHHHHhCCCCEEEEEECHHHHHHH
Confidence            489999999999999999999999997  9999999987765443

>cd01425 RPS2 Ribosomal protein S2 (RPS2), involved in formation of the translation initiation complex, where it might contact the messenger RNA and several components of the ribosome

Probab=89.39  E-value=1.9  Score=30.80  Aligned_cols=34  Identities=15%  Similarity=0.071  Sum_probs=25.6

Q ss_pred             CCccEEE-ecCCC-ccHHHHHHHhCCccEEEccchH
Q 040291          106 EKLDCFI-ADGYM-AWSMEVAKKMNVRGALFWPSSA  139 (160)
Q Consensus       106 ~~~d~vI-~D~~~-~~~~~~A~~lgiP~i~~~~~~~  139 (160)
                      ..||+|| .|+.. ..+..-|.++|||.|.+.-+..
T Consensus       126 ~~Pdlviv~~~~~~~~ai~Ea~~l~IP~I~i~Dtn~  161 (193)
T cd01425         126 RLPDLVIVLDPRKEHQAIREASKLGIPVIAIVDTNC  161 (193)
T ss_pred             cCCCEEEEeCCccchHHHHHHHHcCCCEEEEecCCC
Confidence            4789877 77655 3456679999999999876653

It has been shown that in Escherichia coli RPS2 is essential for the binding of ribosomal protein S1 to the 30s ribosomal subunit. In humans, most likely in all vertebrates, and perhaps in all metazoans, the protein also functions as the 67 kDa laminin receptor (LAMR1 or 67LR), which is formed from a 37 kDa precursor, and is overexpressed in many tumors. 67LR is a cell surface receptor which interacts with a variety of ligands, laminin-1 and others. It is assumed that the ligand interactions are mediated via the conserved C-terminus, which becomes extracellular as the protein undergoes conformational changes which are not well understood. Specifically, a conserved palindromic motif, LMWWML, may participate in the interactions. 67LR plays essential roles in the adhesion of cells to the basement membrane an

>PRK13934 stationary phase survival protein SurE; Provisional

Probab=89.17  E-value=5.5  Score=30.11  Aligned_cols=27  Identities=15%  Similarity=0.130  Sum_probs=21.0

Q ss_pred             HHHHHHHHHHHhCCCEEEEEeCCCChhh
Q 040291           18 IPLLEFSQCLAKQGFRVTFVNTDYDHKR   45 (160)
Q Consensus        18 ~P~l~la~~L~~rGh~Vt~~~~~~~~~~   45 (160)
                      --+..|+++|.+.| +|+++.+...+..
T Consensus        14 pGi~aL~~al~~~g-~V~VvAP~~eqSg   40 (266)
T PRK13934         14 PGLRLLYEFVSPLG-EVDVVAPETPKSA   40 (266)
T ss_pred             HHHHHHHHHHHhCC-cEEEEccCCCCcc
Confidence            44678899998888 8999988876543

>TIGR03600 phage_DnaB phage replicative helicase, DnaB family, HK022 subfamily

Probab=88.73  E-value=7.1  Score=31.31  Aligned_cols=41  Identities=17%  Similarity=0.381  Sum_probs=34.1

Q ss_pred             EEEEcCCCCCChHHHHHHHHHHH-hCCCEEEEEeCCCChhhH
Q 040291            6 VLVLPIPAQGHVIPLLEFSQCLA-KQGFRVTFVNTDYDHKRI   46 (160)
Q Consensus         6 i~~~~~p~~GH~~P~l~la~~L~-~rGh~Vt~~~~~~~~~~~   46 (160)
                      +++...|+.|=..-.+.++..++ +.|+.|.|++.+.....+
T Consensus       197 iviag~pg~GKT~~al~ia~~~a~~~g~~v~~fSlEm~~~~l  238 (421)
T TIGR03600       197 IVIGARPSMGKTTLALNIAENVALREGKPVLFFSLEMSAEQL  238 (421)
T ss_pred             EEEEeCCCCCHHHHHHHHHHHHHHhCCCcEEEEECCCCHHHH
Confidence            45666899999999999999988 679999999988765544

Members of this family are phage (or prophage-region) homologs of the bacterial homohexameric replicative helicase DnaB. Some phage may rely on host DnaB, while others encode their own verions. This model describes the largest phage-specific clade among the close homologs of DnaB, but there are, or course, other DnaB homologs from phage that fall outside the scope of this model.

>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]

Probab=88.65  E-value=7.3  Score=31.35  Aligned_cols=97  Identities=12%  Similarity=0.181  Sum_probs=63.0

Q ss_pred             EEcCCCCCChHHHHHHHHHHHhC--CCEEEEEe-CCCChhhHHhhhccCCCCCCCeeeeecCCCCCCCCCcccHHHHHHH
Q 040291            8 VLPIPAQGHVIPLLEFSQCLAKQ--GFRVTFVN-TDYDHKRIMESLEGKNDLGEQIRLVSIPDGMEPWEDRNDFGKLFEK   84 (160)
Q Consensus         8 ~~~~p~~GH~~P~l~la~~L~~r--Gh~Vt~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~   84 (160)
                      -+=..+.|=++-..+|.++|.++  ++.+++-+ |+...+.+.+.+      ...+....+|-+.+              
T Consensus        53 WiHaaSVGEv~a~~pLv~~l~~~~P~~~ilvTt~T~Tg~e~a~~~~------~~~v~h~YlP~D~~--------------  112 (419)
T COG1519          53 WIHAASVGEVLAALPLVRALRERFPDLRILVTTMTPTGAERAAALF------GDSVIHQYLPLDLP--------------  112 (419)
T ss_pred             EEEecchhHHHHHHHHHHHHHHhCCCCCEEEEecCccHHHHHHHHc------CCCeEEEecCcCch--------------
Confidence            33345678999999999999999  77777755 444444444432      13355555553321              


Q ss_pred             HHHhccHHHHHHHHHHhcCCCCCccEEE-ecC-CCccHHHHHHHhCCccEEEcc
Q 040291           85 VLQVMPGKLEELIEDINSREDEKLDCFI-ADG-YMAWSMEVAKKMNVRGALFWP  136 (160)
Q Consensus        85 ~~~~~~~~~~~ll~~l~~~~~~~~d~vI-~D~-~~~~~~~~A~~lgiP~i~~~~  136 (160)
                            ..++.+++.      .+||++| .+. +++....-+++.|+|.+.+..
T Consensus       113 ------~~v~rFl~~------~~P~l~Ii~EtElWPnli~e~~~~~~p~~LvNa  154 (419)
T COG1519         113 ------IAVRRFLRK------WRPKLLIIMETELWPNLINELKRRGIPLVLVNA  154 (419)
T ss_pred             ------HHHHHHHHh------cCCCEEEEEeccccHHHHHHHHHcCCCEEEEee
Confidence                  123445555      5788655 676 555567788999999998754

>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family

Probab=88.51  E-value=1.6  Score=31.24  Aligned_cols=45  Identities=18%  Similarity=0.087  Sum_probs=39.3

Q ss_pred             CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhHH
Q 040291            3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIM   47 (160)
Q Consensus         3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~   47 (160)
                      +.++++.+.++..|-....-++..|..+|++|+++...-..+.+.
T Consensus        84 ~~~vv~~t~~gd~H~lG~~~v~~~l~~~G~~vi~LG~~vp~e~~v  128 (197)
T TIGR02370        84 LGKVVCGVAEGDVHDIGKNIVVTMLRANGFDVIDLGRDVPIDTVV  128 (197)
T ss_pred             CCeEEEEeCCCchhHHHHHHHHHHHHhCCcEEEECCCCCCHHHHH
Confidence            468999999999999999999999999999999998876655543

This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.

>PRK13935 stationary phase survival protein SurE; Provisional

Probab=88.31  E-value=6.2  Score=29.59  Aligned_cols=25  Identities=16%  Similarity=0.303  Sum_probs=18.9

Q ss_pred             HHHHHHHHHhCCCEEEEEeCCCChhh
Q 040291           20 LLEFSQCLAKQGFRVTFVNTDYDHKR   45 (160)
Q Consensus        20 ~l~la~~L~~rGh~Vt~~~~~~~~~~   45 (160)
                      ...|.++|++ +|+|+++.+...+..
T Consensus        16 i~aL~~~l~~-~~~V~VvAP~~~qSg   40 (253)
T PRK13935         16 IIILAEYLSE-KHEVFVVAPDKERSA   40 (253)
T ss_pred             HHHHHHHHHh-CCcEEEEccCCCCcc
Confidence            6678888865 579999999876543

>PF08660 Alg14: Oligosaccharide biosynthesis protein Alg14 like; InterPro: IPR013969 Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane []

Probab=88.21  E-value=6.9  Score=27.42  Aligned_cols=31  Identities=19%  Similarity=0.265  Sum_probs=22.1

Q ss_pred             CCCCCChHHHHHHHHHH-HhCC-CEEEEEeCCC
Q 040291           11 IPAQGHVIPLLEFSQCL-AKQG-FRVTFVNTDY   41 (160)
Q Consensus        11 ~p~~GH~~P~l~la~~L-~~rG-h~Vt~~~~~~   41 (160)
                      .++.||..-|+.|.+.+ .++. ++..+++..+
T Consensus         5 ~gsGGHt~eml~L~~~~~~~~~~~~~~ivt~~d   37 (170)
T PF08660_consen    5 LGSGGHTAEMLRLLKALDNDRYQPRTYIVTEGD   37 (170)
T ss_pred             EcCcHHHHHHHHHHHHhhhhcCCCcEEEEEcCC
Confidence            46789999999999999 4454 4444444443

>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin)

Probab=88.14  E-value=2.9  Score=26.92  Aligned_cols=38  Identities=24%  Similarity=0.428  Sum_probs=33.7

Q ss_pred             eEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCC
Q 040291            5 HVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYD   42 (160)
Q Consensus         5 ~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~   42 (160)
                      |+++...+..-|-.-..-++..|.++||+|.++-....
T Consensus         2 ~v~~~~~~~~~~~lGl~~la~~l~~~G~~v~~~d~~~~   39 (121)
T PF02310_consen    2 RVVLACVPGEVHPLGLLYLAAYLRKAGHEVDILDANVP   39 (121)
T ss_dssp             EEEEEEBTTSSTSHHHHHHHHHHHHTTBEEEEEESSB-
T ss_pred             EEEEEeeCCcchhHHHHHHHHHHHHCCCeEEEECCCCC
Confidence            68889999999999999999999999999999866543

Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=87.82  E-value=4  Score=30.64  Aligned_cols=24  Identities=17%  Similarity=0.174  Sum_probs=19.6

Q ss_pred             HHHHHHHHHhCCCEEEEEeCCCCh
Q 040291           20 LLEFSQCLAKQGFRVTFVNTDYDH   43 (160)
Q Consensus        20 ~l~la~~L~~rGh~Vt~~~~~~~~   43 (160)
                      -..|+++|.++||+|+..+...+.
T Consensus        12 gr~la~~L~~~g~~v~~s~~t~~~   35 (256)
T TIGR00715        12 SRAIAKGLIAQGIEILVTVTTSEG   35 (256)
T ss_pred             HHHHHHHHHhCCCeEEEEEccCCc
Confidence            578999999999999987665543

This enzyme was found to be a monomer by gel filtration.

>PRK08506 replicative DNA helicase; Provisional

Probab=87.75  E-value=7  Score=32.03  Aligned_cols=41  Identities=15%  Similarity=0.274  Sum_probs=34.7

Q ss_pred             EEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhH
Q 040291            6 VLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRI   46 (160)
Q Consensus         6 i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~   46 (160)
                      +++...|+.|=..-.+.++...+..|+.|.|++.+.....+
T Consensus       195 ivIaarpg~GKT~fal~ia~~~~~~g~~V~~fSlEMs~~ql  235 (472)
T PRK08506        195 IIIAARPSMGKTTLCLNMALKALNQDKGVAFFSLEMPAEQL  235 (472)
T ss_pred             EEEEcCCCCChHHHHHHHHHHHHhcCCcEEEEeCcCCHHHH
Confidence            45666899999999999999998899999999988765544

>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=87.50  E-value=1.3  Score=33.01  Aligned_cols=39  Identities=26%  Similarity=0.348  Sum_probs=31.0

Q ss_pred             eEEEEcCC--CCCChHHHHHHHHHHHhCCCEEEEEeCCCCh
Q 040291            5 HVLVLPIP--AQGHVIPLLEFSQCLAKQGFRVTFVNTDYDH   43 (160)
Q Consensus         5 ~i~~~~~p--~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~   43 (160)
                      ||+++...  ..|+-.-+..++++|.+.||+|++++.....
T Consensus         1 kIl~~~~~~~~gG~~~~~~~l~~~l~~~g~~v~v~~~~~~~   41 (353)
T cd03811           1 KILFVIPSLGGGGAERVLLNLANGLDKRGYDVTLVVLRDEG   41 (353)
T ss_pred             CeEEEeecccCCCcchhHHHHHHHHHhcCceEEEEEcCCCC
Confidence            35555533  5788899999999999999999999886543

WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.

>PLN02605 monogalactosyldiacylglycerol synthase

Probab=87.33  E-value=5.2  Score=31.46  Aligned_cols=31  Identities=16%  Similarity=0.351  Sum_probs=23.8

Q ss_pred             EEEcCCCCCChHHHHHHHHHHHhC-C--CEEEEE
Q 040291            7 LVLPIPAQGHVIPLLEFSQCLAKQ-G--FRVTFV   37 (160)
Q Consensus         7 ~~~~~p~~GH~~P~l~la~~L~~r-G--h~Vt~~   37 (160)
                      .+....|.||......|.++|.++ |  .+|+++
T Consensus         3 ils~~~G~GH~~aa~al~~~~~~~~~~~~~v~~~   36 (382)
T PLN02605          3 ILMSDTGGGHRASAEAIKDAFQLEFGDEYQVFIV   36 (382)
T ss_pred             EEEEcCCcChHHHHHHHHHHHHhhcCCCeeEEEE
Confidence            345578889999999999999875 4  455554

>PRK13933 stationary phase survival protein SurE; Provisional

Probab=87.20  E-value=9.3  Score=28.66  Aligned_cols=24  Identities=17%  Similarity=0.245  Sum_probs=19.0

Q ss_pred             HHHHHHHHHhCCCEEEEEeCCCChh
Q 040291           20 LLEFSQCLAKQGFRVTFVNTDYDHK   44 (160)
Q Consensus        20 ~l~la~~L~~rGh~Vt~~~~~~~~~   44 (160)
                      +..|+++|.+ +++|+++.+...+.
T Consensus        16 l~aL~~~l~~-~~~V~VvAP~~~~S   39 (253)
T PRK13933         16 INTLAELLSK-YHEVIIVAPENQRS   39 (253)
T ss_pred             HHHHHHHHHh-CCcEEEEccCCCCc
Confidence            6788888865 67999999887654

>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS)

Probab=86.92  E-value=11  Score=28.17  Aligned_cols=43  Identities=16%  Similarity=0.213  Sum_probs=37.2

Q ss_pred             eEEEEcCCCCCChHHHHHHHHHHHhCC--CEEEEEeCCCChhhHH
Q 040291            5 HVLVLPIPAQGHVIPLLEFSQCLAKQG--FRVTFVNTDYDHKRIM   47 (160)
Q Consensus         5 ~i~~~~~p~~GH~~P~l~la~~L~~rG--h~Vt~~~~~~~~~~~~   47 (160)
                      ||+++-..+-|++.-+.++.++|.++.  -+|++++.....+.++
T Consensus         1 kILii~~~~iGD~i~~~p~l~~Lk~~~P~~~I~~l~~~~~~~l~~   45 (279)
T cd03789           1 RILVIRLSWIGDVVLATPLLRALKARYPDARITVLAPPWFAPLLE   45 (279)
T ss_pred             CEEEEecccHHHHHHHHHHHHHHHHHCCCCEEEEEEChhhHHHHh
Confidence            588888899999999999999999974  8999999987765443

Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.

>PRK14099 glycogen synthase; Provisional

Probab=86.89  E-value=1.4  Score=36.02  Aligned_cols=40  Identities=20%  Similarity=0.201  Sum_probs=31.1

Q ss_pred             CCCCeEEEEcC---CC--C-CChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291            1 MNRPHVLVLPI---PA--Q-GHVIPLLEFSQCLAKQGFRVTFVNTD   40 (160)
Q Consensus         1 m~~~~i~~~~~---p~--~-GH~~P~l~la~~L~~rGh~Vt~~~~~   40 (160)
                      |.++||++++.   |.  . |=-.-.-.|.++|+++||+|.++.+.
T Consensus         1 ~~~~~il~v~~E~~p~~k~ggl~dv~~~lp~~l~~~g~~v~v~~P~   46 (485)
T PRK14099          1 MTPLRVLSVASEIFPLIKTGGLADVAGALPAALKAHGVEVRTLVPG   46 (485)
T ss_pred             CCCcEEEEEEeccccccCCCcHHHHHHHHHHHHHHCCCcEEEEeCC
Confidence            78889998762   22  2 33366788999999999999999985

>smart00851 MGS MGS-like domain

Probab=86.50  E-value=5.6  Score=24.42  Aligned_cols=27  Identities=37%  Similarity=0.485  Sum_probs=19.6

Q ss_pred             HHHHHHHHHhCCCEEEEEeCCCChhhHHh
Q 040291           20 LLEFSQCLAKQGFRVTFVNTDYDHKRIME   48 (160)
Q Consensus        20 ~l~la~~L~~rGh~Vt~~~~~~~~~~~~~   48 (160)
                      ++++++.|.+.|+++  ++|++..+.+..
T Consensus         2 ~~~~~~~l~~lG~~i--~AT~gTa~~L~~   28 (90)
T smart00851        2 LVELAKRLAELGFEL--VATGGTAKFLRE   28 (90)
T ss_pred             HHHHHHHHHHCCCEE--EEccHHHHHHHH
Confidence            468999999999998  366665555543

This domain composes the whole protein of methylglyoxal synthetase and the domain is also found in Carbamoyl phosphate synthetase (CPS) where it forms a regulatory domain that binds to the allosteric effector ornithine. This family also includes inosicase. The known structures in this family show a common phosphate binding site PUBMED:10526357.

>PRK13931 stationary phase survival protein SurE; Provisional

Probab=86.18  E-value=9.7  Score=28.71  Aligned_cols=98  Identities=8%  Similarity=0.049  Sum_probs=49.3

Q ss_pred             HHHHHHHHHhC---CCEEEEEeCCCChhhHHhhhccCCCCCCCeeeeecCCCCCCCCCcccHHHHHHHHHHhccHHHHHH
Q 040291           20 LLEFSQCLAKQ---GFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIPDGMEPWEDRNDFGKLFEKVLQVMPGKLEEL   96 (160)
Q Consensus        20 ~l~la~~L~~r---Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   96 (160)
                      +..|+++|.+.   |++|+++.+...+....+.+    +....+++..+.++  .......+-+-.. +      .+..+
T Consensus        16 l~aL~~~l~~~~~~~~~V~VVAP~~eqSg~ghai----T~~~pl~~~~~~~~--~yav~GTPaDCV~-l------al~~~   82 (261)
T PRK13931         16 LEVLEQIATELAGPDGEVWTVAPAFEQSGVGHCI----SYTHPMMIAELGPR--RFAAEGSPADCVL-A------ALYDV   82 (261)
T ss_pred             HHHHHHHHHHhccCCCeEEEEeCCCCCCCCcccc----cCCCCeEEEEeCCC--eEEEcCchHHHHH-H------HHHHh
Confidence            45566777663   47999999987654332211    11223444444311  0000111111111 1      12223


Q ss_pred             HHHHhcCCCCCccEEEecC----------CCcc---HHHHHHHhCCccEEEcc
Q 040291           97 IEDINSREDEKLDCFIADG----------YMAW---SMEVAKKMNVRGALFWP  136 (160)
Q Consensus        97 l~~l~~~~~~~~d~vI~D~----------~~~~---~~~~A~~lgiP~i~~~~  136 (160)
                      +..      .+||+||+..          +++.   ++.-|..+|||.|.++.
T Consensus        83 ~~~------~~pDlVvSGIN~G~N~g~~v~ySGTVgAA~Ea~~~GiPsiA~S~  129 (261)
T PRK13931         83 MKD------APPDLVLSGVNRGNNSAENVLYSGTVGGAMEAALQGLPAIALSQ  129 (261)
T ss_pred             cCC------CCCCEEEECCccCCCCCcCcccchhHHHHHHHHhcCCCeEEEEe
Confidence            221      3689998743          3333   24557888999999985

>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=86.12  E-value=12  Score=27.92  Aligned_cols=32  Identities=13%  Similarity=0.182  Sum_probs=27.3

Q ss_pred             CCCCCChHHHHHHHHHHHhCCCEEEEEeCCCC
Q 040291           11 IPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYD   42 (160)
Q Consensus        11 ~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~   42 (160)
                      +...|.-.....++++|.+.||+|.+++....
T Consensus         9 ~~~gG~~~~~~~l~~~l~~~~~~v~~~~~~~~   40 (365)
T cd03807           9 LDVGGAERMLVRLLKGLDRDRFEHVVISLTDR   40 (365)
T ss_pred             ccCccHHHHHHHHHHHhhhccceEEEEecCcc
Confidence            34478999999999999999999999987543

WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.

>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type

Probab=86.08  E-value=1.6  Score=35.29  Aligned_cols=38  Identities=24%  Similarity=0.287  Sum_probs=27.3

Q ss_pred             CeEEEEcC---CC---CCChHHHHHHHHHHHhCCCEEEEEeCCC
Q 040291            4 PHVLVLPI---PA---QGHVIPLLEFSQCLAKQGFRVTFVNTDY   41 (160)
Q Consensus         4 ~~i~~~~~---p~---~GH~~P~l~la~~L~~rGh~Vt~~~~~~   41 (160)
                      +||+++++   |.   .|=-.-.-.|+++|+++||+|.++++.-
T Consensus         1 m~i~~vs~E~~P~~k~GGl~~~v~~L~~aL~~~G~~v~v~~p~y   44 (473)
T TIGR02095         1 MRVLFVAAEMAPFAKTGGLADVVGALPKALAALGHDVRVLLPAY   44 (473)
T ss_pred             CeEEEEEeccccccCcCcHHHHHHHHHHHHHHcCCeEEEEecCC
Confidence            36666652   32   2333556889999999999999999753

This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.

>cd00561 CobA_CobO_BtuR ATP:corrinoid adenosyltransferase BtuR/CobO/CobP

Probab=85.95  E-value=9.4  Score=26.49  Aligned_cols=35  Identities=20%  Similarity=0.277  Sum_probs=31.2

Q ss_pred             CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEE
Q 040291            3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFV   37 (160)
Q Consensus         3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~   37 (160)
                      +.-|-+++.++.|=....+.+|-+.+.+|++|.++
T Consensus         2 ~G~i~vy~g~G~Gkt~~a~g~~~ra~~~g~~v~~v   36 (159)
T cd00561           2 KGLIQVYTGNGKGKTTAALGLALRALGHGYRVGVV   36 (159)
T ss_pred             CCEEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEE
Confidence            45678899999999999999999999999999993

This family consists of the BtuR, CobO, CobP proteins all of which are Cob(I)alamin (vitamin B12) adenosyltransferase, which is involved in cobalamin (vitamin B12) biosynthesis. This enzyme is a homodimer, which catalyzes the adenosylation reaction: ATP + cob(I)alamin + H2O <= phosphate + diphosphate + adenosylcobalamin.

>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed

Probab=85.70  E-value=12  Score=31.68  Aligned_cols=42  Identities=12%  Similarity=0.010  Sum_probs=27.7

Q ss_pred             HHHHHHHHHhcCCCCCccEEE-ecCC--CccHHHHHHHhCC--ccEEEcc
Q 040291           92 KLEELIEDINSREDEKLDCFI-ADGY--MAWSMEVAKKMNV--RGALFWP  136 (160)
Q Consensus        92 ~~~~ll~~l~~~~~~~~d~vI-~D~~--~~~~~~~A~~lgi--P~i~~~~  136 (160)
                      .++++.+.+.+   .+||++| .|.-  ....+..+++.|+  |.+.+.+
T Consensus       298 ~~~~l~~~i~~---~kPD~vIlID~PgFNlrLAK~lkk~Gi~ipviyYVs  344 (608)
T PRK01021        298 RYRKLYKTILK---TNPRTVICIDFPDFHFLLIKKLRKRGYKGKIVHYVC  344 (608)
T ss_pred             HHHHHHHHHHh---cCCCEEEEeCCCCCCHHHHHHHHhcCCCCCEEEEEC
Confidence            34555555554   6899988 6873  3335567788896  9877644

>cd02069 methionine_synthase_B12_BD B12 binding domain of methionine synthase

Probab=85.62  E-value=2.9  Score=30.40  Aligned_cols=44  Identities=14%  Similarity=0.180  Sum_probs=38.6

Q ss_pred             CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhH
Q 040291            3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRI   46 (160)
Q Consensus         3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~   46 (160)
                      +.++++.+.++..|-....-++..|.++|++|+++...-..+.+
T Consensus        88 ~~~vvl~t~~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~~  131 (213)
T cd02069          88 KGKIVLATVKGDVHDIGKNLVGVILSNNGYEVIDLGVMVPIEKI  131 (213)
T ss_pred             CCeEEEEeCCCchhHHHHHHHHHHHHhCCCEEEECCCCCCHHHH
Confidence            56899999999999999999999999999999999876655444

This domain binds methylcobalamin, which it uses as an intermediate methyl carrier from methyltetrahydrofolate (CH3H4folate) to homocysteine (Hcy).

>COG1618 Predicted nucleotide kinase [Nucleotide transport and metabolism]

Probab=85.57  E-value=3.6  Score=28.85  Aligned_cols=56  Identities=14%  Similarity=0.205  Sum_probs=44.2

Q ss_pred             CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhHHhhhccCCCCCCCeeeeecCC
Q 040291            3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIPD   67 (160)
Q Consensus         3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~   67 (160)
                      .++|.+.-.|+.|-..-...++..|.++|++|-=+.+++..+.=.         ..|++.+.+..
T Consensus         5 ~mki~ITG~PGvGKtTl~~ki~e~L~~~g~kvgGf~t~EVR~gGk---------R~GF~Ivdl~t   60 (179)
T COG1618           5 AMKIFITGRPGVGKTTLVLKIAEKLREKGYKVGGFITPEVREGGK---------RIGFKIVDLAT   60 (179)
T ss_pred             ceEEEEeCCCCccHHHHHHHHHHHHHhcCceeeeEEeeeeecCCe---------EeeeEEEEccC
Confidence            578999999999999999999999999999998777766543211         13677777653

>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain

Probab=85.41  E-value=3  Score=27.36  Aligned_cols=42  Identities=21%  Similarity=0.292  Sum_probs=36.5

Q ss_pred             eEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhH
Q 040291            5 HVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRI   46 (160)
Q Consensus         5 ~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~   46 (160)
                      |+++.+.++..|-.-..-++.-|...|++|..+......+.+
T Consensus         1 ~vv~~~~~gd~H~lG~~~~~~~l~~~G~~vi~lG~~vp~e~~   42 (122)
T cd02071           1 RILVAKPGLDGHDRGAKVIARALRDAGFEVIYTGLRQTPEEI   42 (122)
T ss_pred             CEEEEecCCChhHHHHHHHHHHHHHCCCEEEECCCCCCHHHH
Confidence            688999999999999999999999999999999886554443

This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.

>PRK05595 replicative DNA helicase; Provisional

Probab=85.26  E-value=8.6  Score=31.17  Aligned_cols=41  Identities=17%  Similarity=0.383  Sum_probs=33.4

Q ss_pred             EEEEcCCCCCChHHHHHHHHHHH-hCCCEEEEEeCCCChhhH
Q 040291            6 VLVLPIPAQGHVIPLLEFSQCLA-KQGFRVTFVNTDYDHKRI   46 (160)
Q Consensus         6 i~~~~~p~~GH~~P~l~la~~L~-~rGh~Vt~~~~~~~~~~~   46 (160)
                      +++..-|+.|=..-.+.++..++ +.|..|.+++.+.....+
T Consensus       204 iviaarpg~GKT~~al~ia~~~a~~~g~~vl~fSlEms~~~l  245 (444)
T PRK05595        204 ILIAARPSMGKTTFALNIAEYAALREGKSVAIFSLEMSKEQL  245 (444)
T ss_pred             EEEEecCCCChHHHHHHHHHHHHHHcCCcEEEEecCCCHHHH
Confidence            44566889999999999999887 569999999988765544

>PRK09620 hypothetical protein; Provisional

Probab=85.20  E-value=1.6  Score=32.09  Aligned_cols=40  Identities=15%  Similarity=0.120  Sum_probs=28.3

Q ss_pred             CCCCeEEEEcCCCCCChHHH------------HHHHHHHHhCCCEEEEEeCC
Q 040291            1 MNRPHVLVLPIPAQGHVIPL------------LEFSQCLAKQGFRVTFVNTD   40 (160)
Q Consensus         1 m~~~~i~~~~~p~~GH~~P~------------l~la~~L~~rGh~Vt~~~~~   40 (160)
                      |+..+|++...|..=.+.|.            ..||++|.+||++|+++...
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~   52 (229)
T PRK09620          1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGY   52 (229)
T ss_pred             CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCC
Confidence            45667777766544443332            57899999999999998753

>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds

Probab=84.97  E-value=1.8  Score=30.23  Aligned_cols=26  Identities=31%  Similarity=0.552  Sum_probs=24.7

Q ss_pred             CCCChHHHHHHHHHHHhCCCEEEEEe
Q 040291           13 AQGHVIPLLEFSQCLAKQGFRVTFVN   38 (160)
Q Consensus        13 ~~GH~~P~l~la~~L~~rGh~Vt~~~   38 (160)
                      ..|+-.....+++.|.++||+|+++.
T Consensus        12 ~~G~~~~~~~l~~~L~~~g~~v~v~~   37 (229)
T cd01635          12 GGGVELVLLDLAKALARRGHEVEVVA   37 (229)
T ss_pred             CCCchhHHHHHHHHHHHcCCeEEEEE
Confidence            66999999999999999999999998

The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.

>cd01980 Chlide_reductase_Y Chlide_reductase_Y : Y subunit of chlorophyllide (chlide) reductase (BchY)

Probab=84.95  E-value=18  Score=29.00  Aligned_cols=28  Identities=14%  Similarity=0.083  Sum_probs=23.0

Q ss_pred             CCccEEEecCCCccHHHHHHHhCCccEEEcc
Q 040291          106 EKLDCFIADGYMAWSMEVAKKMNVRGALFWP  136 (160)
Q Consensus       106 ~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~  136 (160)
                      .+||++|..   +.+..+|+++|||.+.+.-
T Consensus       349 ~~pDl~Ig~---s~~~~~a~~~giP~~r~~~  376 (416)
T cd01980         349 YRPDLAIGT---TPLVQYAKEKGIPALYYTN  376 (416)
T ss_pred             cCCCEEEeC---ChhhHHHHHhCCCEEEecC
Confidence            589999977   4577899999999988543

Chlide reductase participates in photosynthetic pigment synthesis playing a role in the conversion of chlorophylls(Chl) into bacteriochlorophylls (BChl). Chlide reductase catalyzes the reduction of the B-ring of the tetrapyrolle. Chlide reductase is a three subunit enzyme (subunits are designated BchX, BchY and BchZ). The similarity between these three subunits and the subunits for nitrogenase suggests that BchX serves as an electron donor for the BchY-BchY catalytic subunits.

>TIGR03492 conserved hypothetical protein

Probab=84.94  E-value=13  Score=29.69  Aligned_cols=108  Identities=13%  Similarity=0.098  Sum_probs=53.1

Q ss_pred             CChHHHHHHHHHHHh--CCCEEE---EEeCCCChhhHHhhhccCCCCCCCeeeeecCCC-CCCCCCcccHHHHHHHHHHh
Q 040291           15 GHVIPLLEFSQCLAK--QGFRVT---FVNTDYDHKRIMESLEGKNDLGEQIRLVSIPDG-MEPWEDRNDFGKLFEKVLQV   88 (160)
Q Consensus        15 GH~~P~l~la~~L~~--rGh~Vt---~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~-~~~~~~~~~~~~~~~~~~~~   88 (160)
                      |==.--+.++++|.+  +|++|.   ++.+....+.  +..+     ..+ .+..+|.+ +........+.+....+...
T Consensus         8 ged~~a~ai~~~l~~~~~~~~v~~~p~vG~~~~~e~--~~ip-----~~g-~~~~~~sgg~~~~~~~~~~~~~~~gl~~~   79 (396)
T TIGR03492         8 GEDLIAARIAKALLQLSPDLNLEALPLVGEGRAYQN--LGIP-----IIG-PTKELPSGGFSYQSLRGLLRDLRAGLVGL   79 (396)
T ss_pred             hHHHHHHHHHHHHHhhCCCCCeEEeCcccCCHHHhh--CCCc-----eeC-CCCCCCCCCccCCCHHHHHHHHHhhHHHH
Confidence            333566889999998  699999   8887654321  0110     012 33334322 11100001112222212222


Q ss_pred             ccHHHHHHHHHHhcCCCCCccEEEecCCCccHHHHHHHhCCccEEEcc
Q 040291           89 MPGKLEELIEDINSREDEKLDCFIADGYMAWSMEVAKKMNVRGALFWP  136 (160)
Q Consensus        89 ~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~  136 (160)
                      ..... .++++..    .++|+||.=-=+. ....|...|+|++.+.+
T Consensus        80 ~~~~~-~~~~~~~----~~p~~v~~~Gg~v-~~~aA~~~~~p~~~~~~  121 (396)
T TIGR03492        80 TLGQW-RALRKWA----KKGDLIVAVGDIV-PLLFAWLSGKPYAFVGT  121 (396)
T ss_pred             HHHHH-HHHHHHh----hcCCEEEEECcHH-HHHHHHHcCCCceEEEe
Confidence            22222 2344421    3789888322111 56678888999999433

This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.

>PRK06321 replicative DNA helicase; Provisional

Probab=84.73  E-value=14  Score=30.30  Aligned_cols=41  Identities=12%  Similarity=0.246  Sum_probs=33.5

Q ss_pred             EEEEcCCCCCChHHHHHHHHHHHh-CCCEEEEEeCCCChhhH
Q 040291            6 VLVLPIPAQGHVIPLLEFSQCLAK-QGFRVTFVNTDYDHKRI   46 (160)
Q Consensus         6 i~~~~~p~~GH~~P~l~la~~L~~-rGh~Vt~~~~~~~~~~~   46 (160)
                      +++..-|+.|=..-.+.+++..+. .|..|.|++-+.....+
T Consensus       229 iiiaarPgmGKTafal~ia~~~a~~~g~~v~~fSLEMs~~ql  270 (472)
T PRK06321        229 MILAARPAMGKTALALNIAENFCFQNRLPVGIFSLEMTVDQL  270 (472)
T ss_pred             EEEEeCCCCChHHHHHHHHHHHHHhcCCeEEEEeccCCHHHH
Confidence            456668999999999999999884 59999999888766544

>PRK00346 surE 5'(3')-nucleotidase/polyphosphatase; Provisional

Probab=84.41  E-value=13  Score=27.76  Aligned_cols=26  Identities=19%  Similarity=0.248  Sum_probs=20.5

Q ss_pred             HHHHHHHHHHhCCCEEEEEeCCCChhh
Q 040291           19 PLLEFSQCLAKQGFRVTFVNTDYDHKR   45 (160)
Q Consensus        19 P~l~la~~L~~rGh~Vt~~~~~~~~~~   45 (160)
                      -+..|+++|.+. |+|+++.+...+..
T Consensus        15 Gi~aL~~~l~~~-~~V~VvAP~~~qSg   40 (250)
T PRK00346         15 GIRALAEALREL-ADVTVVAPDRERSG   40 (250)
T ss_pred             hHHHHHHHHHhC-CCEEEEeCCCCCcC
Confidence            367888999988 69999999876543

>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II

Probab=84.29  E-value=15  Score=28.19  Aligned_cols=42  Identities=12%  Similarity=0.167  Sum_probs=36.8

Q ss_pred             eEEEEcCCCCCChHHHHHHHHHHHhC--CCEEEEEeCCCChhhH
Q 040291            5 HVLVLPIPAQGHVIPLLEFSQCLAKQ--GFRVTFVNTDYDHKRI   46 (160)
Q Consensus         5 ~i~~~~~p~~GH~~P~l~la~~L~~r--Gh~Vt~~~~~~~~~~~   46 (160)
                      ||+++-..+-|++.-..++.++|.+.  +.+|++++.+...+.+
T Consensus         1 rILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~~~~~l~   44 (334)
T TIGR02195         1 KILVIGPSWVGDMVMAQSLYRLLKKRYPQAVIDVLAPAWCRPLL   44 (334)
T ss_pred             CEEEEccchhHHHHHHHHHHHHHHHHCCCCEEEEEechhhHHHH
Confidence            58899999999999999999999986  8999999987665444

This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.

>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional

Probab=84.27  E-value=18  Score=28.18  Aligned_cols=44  Identities=9%  Similarity=0.137  Sum_probs=39.3

Q ss_pred             CCeEEEEcCCCCCChHHHHHHHHHHHhC--CCEEEEEeCCCChhhH
Q 040291            3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQ--GFRVTFVNTDYDHKRI   46 (160)
Q Consensus         3 ~~~i~~~~~p~~GH~~P~l~la~~L~~r--Gh~Vt~~~~~~~~~~~   46 (160)
                      .++|+++-..+.|++.-..++.++|.++  +.+|++++.+...+.+
T Consensus         5 ~~~ILii~~~~iGD~vl~~P~l~~Lk~~~P~a~I~~l~~~~~~~l~   50 (352)
T PRK10422          5 FRRILIIKMRFHGDMLLTTPVISSLKKNYPDAKIDVLLYQDTIPIL   50 (352)
T ss_pred             CceEEEEEecccCceeeHHHHHHHHHHHCCCCeEEEEeccChHHHh
Confidence            4689999999999999999999999997  8999999998776544

>PHA02542 41 41 helicase; Provisional

Probab=84.20  E-value=8.1  Score=31.71  Aligned_cols=41  Identities=17%  Similarity=0.317  Sum_probs=34.5

Q ss_pred             EEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhH
Q 040291            6 VLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRI   46 (160)
Q Consensus         6 i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~   46 (160)
                      +++..-|+.|=..-.+.+|...++.|..|-+++-+.....+
T Consensus       193 iiIaarPgmGKTtfalniA~~~a~~g~~Vl~fSLEM~~~ql  233 (473)
T PHA02542        193 NVLLAGVNVGKSLGLCSLAADYLQQGYNVLYISMEMAEEVI  233 (473)
T ss_pred             EEEEcCCCccHHHHHHHHHHHHHhcCCcEEEEeccCCHHHH
Confidence            45666899999999999999999899999999887765543

>PRK08760 replicative DNA helicase; Provisional

Probab=83.72  E-value=10  Score=31.15  Aligned_cols=41  Identities=15%  Similarity=0.231  Sum_probs=33.5

Q ss_pred             EEEEcCCCCCChHHHHHHHHHHHh-CCCEEEEEeCCCChhhH
Q 040291            6 VLVLPIPAQGHVIPLLEFSQCLAK-QGFRVTFVNTDYDHKRI   46 (160)
Q Consensus         6 i~~~~~p~~GH~~P~l~la~~L~~-rGh~Vt~~~~~~~~~~~   46 (160)
                      +++..-|+.|=..-.+.+|...+. .|..|-|++-+.....+
T Consensus       232 ivIaarPg~GKTafal~iA~~~a~~~g~~V~~fSlEMs~~ql  273 (476)
T PRK08760        232 IILAARPAMGKTTFALNIAEYAAIKSKKGVAVFSMEMSASQL  273 (476)
T ss_pred             EEEEeCCCCChhHHHHHHHHHHHHhcCCceEEEeccCCHHHH
Confidence            456668999999999999999885 49999999888765544

>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=83.43  E-value=11  Score=29.87  Aligned_cols=39  Identities=26%  Similarity=0.240  Sum_probs=24.4

Q ss_pred             HHHHHHHHhcCCCCCccEEE-ecCC--CccHHHHHHHhCCc--cEEE
Q 040291           93 LEELIEDINSREDEKLDCFI-ADGY--MAWSMEVAKKMNVR--GALF  134 (160)
Q Consensus        93 ~~~ll~~l~~~~~~~~d~vI-~D~~--~~~~~~~A~~lgiP--~i~~  134 (160)
                      ++++.+.+.+   .+||++| .|.-  ....+..+++.|+|  .+.+
T Consensus        71 ~~~~~~~~~~---~~pd~vIlID~pgFNlrlak~lk~~~~~~~viyY  114 (373)
T PF02684_consen   71 FRKLVERIKE---EKPDVVILIDYPGFNLRLAKKLKKRGIPIKVIYY  114 (373)
T ss_pred             HHHHHHHHHH---cCCCEEEEeCCCCccHHHHHHHHHhCCCceEEEE
Confidence            3444444443   6899888 8873  33345677888988  4443

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process

>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []

Probab=83.36  E-value=5.9  Score=27.72  Aligned_cols=48  Identities=19%  Similarity=0.339  Sum_probs=32.3

Q ss_pred             HHHHHHHHHHhcCCCCCccEEEecCCCccHHHHHHHhCCccEEEccchHHHHHH
Q 040291           91 GKLEELIEDINSREDEKLDCFIADGYMAWSMEVAKKMNVRGALFWPSSAASVAL  144 (160)
Q Consensus        91 ~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~~~~~~~~~  144 (160)
                      ..+++.++++.+   .++|+||.+..   +..+|+++|+|++.+.++.-+....
T Consensus       112 ~e~~~~i~~~~~---~G~~viVGg~~---~~~~A~~~gl~~v~i~sg~esi~~A  159 (176)
T PF06506_consen  112 EEIEAAIKQAKA---EGVDVIVGGGV---VCRLARKLGLPGVLIESGEESIRRA  159 (176)
T ss_dssp             HHHHHHHHHHHH---TT--EEEESHH---HHHHHHHTTSEEEESS--HHHHHHH
T ss_pred             HHHHHHHHHHHH---cCCcEEECCHH---HHHHHHHcCCcEEEEEecHHHHHHH
Confidence            346666777665   57999998854   5689999999999998865554443

Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.

>PRK11519 tyrosine kinase; Provisional

Probab=83.33  E-value=29  Score=30.05  Aligned_cols=39  Identities=18%  Similarity=0.386  Sum_probs=31.5

Q ss_pred             CeEEEEc--CCCCCChHHHHHHHHHHHhCCCEEEEEeCCCC
Q 040291            4 PHVLVLP--IPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYD   42 (160)
Q Consensus         4 ~~i~~~~--~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~   42 (160)
                      .++++++  .|+.|=..-...||..|+.+|++|-++-.+..
T Consensus       526 ~kvi~vts~~~geGKTt~a~nLA~~la~~g~rvLlID~Dlr  566 (719)
T PRK11519        526 NNVLMMTGVSPSIGKTFVCANLAAVISQTNKRVLLIDCDMR  566 (719)
T ss_pred             ceEEEEECCCCCCCHHHHHHHHHHHHHhCCCcEEEEeCCCC
Confidence            4566555  57789999999999999999999999866543

>PF07894 DUF1669: Protein of unknown function (DUF1669); InterPro: IPR012461 This family is composed of sequences derived from hypothetical eukaryotic proteins of unknown function

Probab=83.09  E-value=2  Score=32.71  Aligned_cols=45  Identities=16%  Similarity=0.244  Sum_probs=33.8

Q ss_pred             HHHHHHHHHHhcCCCCCccEEEecCCCcc-----HHHHHHHhCCccEEEcc
Q 040291           91 GKLEELIEDINSREDEKLDCFIADGYMAW-----SMEVAKKMNVRGALFWP  136 (160)
Q Consensus        91 ~~~~~ll~~l~~~~~~~~d~vI~D~~~~~-----~~~~A~~lgiP~i~~~~  136 (160)
                      +.++++++++-+.+ .++-+||.|.|...     ...+|.+.+||++.+.-
T Consensus       133 p~IKE~vR~~I~~A-~kVIAIVMD~FTD~dIf~DLleAa~kR~VpVYiLLD  182 (284)
T PF07894_consen  133 PHIKEVVRRMIQQA-QKVIAIVMDVFTDVDIFCDLLEAANKRGVPVYILLD  182 (284)
T ss_pred             CCHHHHHHHHHHHh-cceeEEEeeccccHHHHHHHHHHHHhcCCcEEEEec
Confidence            45777777765433 68999999999854     24677799999999754

Some members of this family are annotated as being potential phospholipases but no literature was found to support this.

>TIGR02852 spore_dpaB dipicolinic acid synthetase, B subunit

Probab=82.18  E-value=2.2  Score=30.47  Aligned_cols=39  Identities=10%  Similarity=0.026  Sum_probs=30.8

Q ss_pred             eEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCCh
Q 040291            5 HVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDH   43 (160)
Q Consensus         5 ~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~   43 (160)
                      ||++.-.++.|=+.-..++.++|.++|++|+++.++.-.
T Consensus         2 ~I~lgITGs~~a~~a~~~ll~~L~~~g~~V~vI~S~~A~   40 (187)
T TIGR02852         2 RIGFGLTGSHCTLEAVMPQLEKLVDEGAEVTPIVSETVQ   40 (187)
T ss_pred             EEEEEEecHHHHHHHHHHHHHHHHhCcCEEEEEEchhHH
Confidence            566666666666666679999999999999999988654

Members of this family represent the B subunit of dipicolinic acid synthetase, an enzyme that synthesizes a small molecule that appears to confer heat stability to bacterial endospores such as those of Bacillus subtilis. The A and B subunits are together in what was originally designated the spoVF locus for stage V of endospore formation.

>cd01423 MGS_CPS_I_III Methylglyoxal synthase-like domain found in pyr1 and URA1-like carbamoyl phosphate synthetases (CPS), including ammonia-dependent CPS Type I, and glutamine-dependent CPS Type III

Probab=82.02  E-value=11  Score=24.27  Aligned_cols=87  Identities=22%  Similarity=0.178  Sum_probs=51.3

Q ss_pred             ChHHHHHHHHHHHhCCCEEEEEeCCCChhhHHhhhccCCCCCCCeeeeecCCCCCCCCCcccHHHHHHHHHHhccHHHHH
Q 040291           16 HVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIPDGMEPWEDRNDFGKLFEKVLQVMPGKLEE   95 (160)
Q Consensus        16 H~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   95 (160)
                      .-.=+.++++.|.+.|+++  +++.+..+.+..         .++....+.. ..... ..+            .+.+.+
T Consensus        11 dk~~~~~~a~~l~~~G~~i--~aT~gTa~~L~~---------~gi~~~~v~~-~~~~~-~~~------------~~~i~~   65 (116)
T cd01423          11 SKPELLPTAQKLSKLGYKL--YATEGTADFLLE---------NGIPVTPVAW-PSEEP-QND------------KPSLRE   65 (116)
T ss_pred             cchhHHHHHHHHHHCCCEE--EEccHHHHHHHH---------cCCCceEeee-ccCCC-CCC------------chhHHH
Confidence            4455789999999999888  466666555543         3454433311 00000 000            123445


Q ss_pred             HHHHHhcCCCCCccEEEecCC---------CccHHHHHHHhCCccEE
Q 040291           96 LIEDINSREDEKLDCFIADGY---------MAWSMEVAKKMNVRGAL  133 (160)
Q Consensus        96 ll~~l~~~~~~~~d~vI~D~~---------~~~~~~~A~~lgiP~i~  133 (160)
                      ++++      .++|+||.-+-         .......|-++|||+++
T Consensus        66 ~i~~------~~idlVIn~~~~~~~~~~~~~~~iRr~Av~~~ip~iT  106 (116)
T cd01423          66 LLAE------GKIDLVINLPSNRGKRVLDNDYVMRRAADDFAVPLIT  106 (116)
T ss_pred             HHHc------CCceEEEECCCCCCCccccCcEeeehhhHhhCCcccc
Confidence            5554      58999997432         23456789999999963

These are multidomain proteins, in which MGS is the C-terminal domain.

>PF01975 SurE: Survival protein SurE; InterPro: IPR002828 This entry represents a SurE-like structural domain with a 3-layer alpha/bete/alpha topology that bears some topological similarity to the N-terminal domain of the glutaminase/asparaginase family

Probab=81.86  E-value=4.5  Score=29.08  Aligned_cols=40  Identities=15%  Similarity=0.212  Sum_probs=26.6

Q ss_pred             eEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhh
Q 040291            5 HVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKR   45 (160)
Q Consensus         5 ~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~   45 (160)
                      ||++.-==+. +---+..|.++|.+.||+|+++.+...+..
T Consensus         2 ~ILlTNDDGi-~a~Gi~aL~~~L~~~g~~V~VvAP~~~~Sg   41 (196)
T PF01975_consen    2 RILLTNDDGI-DAPGIRALAKALSALGHDVVVVAPDSEQSG   41 (196)
T ss_dssp             EEEEE-SS-T-TSHHHHHHHHHHTTTSSEEEEEEESSSTTT
T ss_pred             eEEEEcCCCC-CCHHHHHHHHHHHhcCCeEEEEeCCCCCcC
Confidence            4444442222 334467899999888899999999876543

This domain is found in the stationary phase survival protein SurE, a metal ion-dependent phosphatase found in eubacteria, archaea and eukaryotes. In Escherichia coli, SurE also has activity as a nucleotidase and exopolyphosphatase, and may be involved in the stress response []. E. coli cells with mutations in the surE gene survive poorly in stationary phase []. The structure of SurE homologues have been determined from Thermotoga maritima [] and the archaea Pyrobaculum aerophilum []. The T. maritima SurE homologue has phosphatase activity that is inhibited by vanadate or tungstate, both of which bind adjacent to the divalent metal ion. This domain is found in acid phosphatases (3.1.3.2 from EC), 5'-nucleotidases (3.1.3.5 from EC), 3'-nucleotidases (3.1.3.6 from EC) and exopolyphosphatases (3.6.1.11 from EC).; GO: 0016787 hydrolase activity; PDB: 1L5X_B 2V4O_D 2V4N_A 2WQK_B 2E6G_G 2E69_D 2E6C_C 2E6B_D 2E6E_A 2E6H_A ....

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=81.77  E-value=1.9  Score=30.63  Aligned_cols=40  Identities=20%  Similarity=0.339  Sum_probs=25.5

Q ss_pred             CCCeEEEEcCCCCCChHHH------------HHHHHHHHhCCCEEEEEeCCC
Q 040291            2 NRPHVLVLPIPAQGHVIPL------------LEFSQCLAKQGFRVTFVNTDY   41 (160)
Q Consensus         2 ~~~~i~~~~~p~~GH~~P~------------l~la~~L~~rGh~Vt~~~~~~   41 (160)
                      +..+|++...|..=.+.|.            ..||+++..||++||++..+.
T Consensus         2 ~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~   53 (185)
T PF04127_consen    2 KGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPS   53 (185)
T ss_dssp             TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TT
T ss_pred             CCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCc
Confidence            3455555555554444443            578999999999999999874

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>COG1484 DnaC DNA replication protein [DNA replication, recombination, and repair]

Probab=81.76  E-value=3.4  Score=30.90  Aligned_cols=47  Identities=17%  Similarity=0.266  Sum_probs=39.5

Q ss_pred             CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhHHhh
Q 040291            3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMES   49 (160)
Q Consensus         3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~   49 (160)
                      ...++++-.||.|=..=...++.+|..+|+.|+|++.++....+...
T Consensus       105 ~~nl~l~G~~G~GKThLa~Ai~~~l~~~g~sv~f~~~~el~~~Lk~~  151 (254)
T COG1484         105 GENLVLLGPPGVGKTHLAIAIGNELLKAGISVLFITAPDLLSKLKAA  151 (254)
T ss_pred             CCcEEEECCCCCcHHHHHHHHHHHHHHcCCeEEEEEHHHHHHHHHHH
Confidence            34688888999998888999999999999999999998876655443

>TIGR00665 DnaB replicative DNA helicase

Probab=81.66  E-value=19  Score=29.00  Aligned_cols=41  Identities=17%  Similarity=0.343  Sum_probs=34.0

Q ss_pred             EEEEcCCCCCChHHHHHHHHHHHh-CCCEEEEEeCCCChhhH
Q 040291            6 VLVLPIPAQGHVIPLLEFSQCLAK-QGFRVTFVNTDYDHKRI   46 (160)
Q Consensus         6 i~~~~~p~~GH~~P~l~la~~L~~-rGh~Vt~~~~~~~~~~~   46 (160)
                      +++...|+.|=..-.+.++..++. .|..|.+++.+.....+
T Consensus       198 ~vi~g~pg~GKT~~~l~~a~~~a~~~g~~vl~~SlEm~~~~i  239 (434)
T TIGR00665       198 IILAARPSMGKTAFALNIAENAAIKEGKPVAFFSLEMSAEQL  239 (434)
T ss_pred             EEEEeCCCCChHHHHHHHHHHHHHhCCCeEEEEeCcCCHHHH
Confidence            456668899999999999999886 59999999998776554

This model describes the helicase DnaB, a homohexameric protein required for DNA replication. The homohexamer can form a ring around a single strand of DNA near a replication fork. An intein of 400 residues is found at a conserved location in DnaB of Synechocystis PCC6803, Rhodothermus marinus (both experimentally confirmed), and Mycobacterium tuberculosis. The intein removes itself by a self-splicing reaction. The seed alignment contains inteins so that the model built from the seed alignment will model a low cost at common intein insertion sites.

>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases

Probab=81.35  E-value=1.7  Score=35.05  Aligned_cols=24  Identities=25%  Similarity=0.321  Sum_probs=20.3

Q ss_pred             HHHHHHHHHHHhCCCEEEEEeCCC
Q 040291           18 IPLLEFSQCLAKQGFRVTFVNTDY   41 (160)
Q Consensus        18 ~P~l~la~~L~~rGh~Vt~~~~~~   41 (160)
                      .-.-.|+++|+++||+|+++++.-
T Consensus        20 ~~~~~L~~aL~~~G~~V~Vi~p~y   43 (476)
T cd03791          20 DVVGALPKALAKLGHDVRVIMPKY   43 (476)
T ss_pred             HHHHHHHHHHHHCCCeEEEEecCC
Confidence            445779999999999999999753

Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.

>COG2874 FlaH Predicted ATPases involved in biogenesis of archaeal flagella [Cell motility and secretion / Intracellular trafficking and secretion]

Probab=81.18  E-value=5.1  Score=29.43  Aligned_cols=32  Identities=25%  Similarity=0.483  Sum_probs=26.5

Q ss_pred             CCCChHHHHHHHHHHHhCCCEEEEEeCCCChh
Q 040291           13 AQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHK   44 (160)
Q Consensus        13 ~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~   44 (160)
                      +.|--.-..+++..+...|++||+++|+....
T Consensus        38 ~tGKSvLsqr~~YG~L~~g~~v~yvsTe~T~r   69 (235)
T COG2874          38 GTGKSVLSQRFAYGFLMNGYRVTYVSTELTVR   69 (235)
T ss_pred             CccHHHHHHHHHHHHHhCCceEEEEEechhHH
Confidence            45666777889999999999999999987643

>cd01424 MGS_CPS_II Methylglyoxal synthase-like domain from type II glutamine-dependent carbamoyl phosphate synthetase (CSP)

Probab=81.04  E-value=12  Score=23.88  Aligned_cols=84  Identities=17%  Similarity=0.117  Sum_probs=52.4

Q ss_pred             CChHHHHHHHHHHHhCCCEEEEEeCCCChhhHHhhhccCCCCCCCeeeeecCCCCCCCCCcccHHHHHHHHHHhccHHHH
Q 040291           15 GHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIPDGMEPWEDRNDFGKLFEKVLQVMPGKLE   94 (160)
Q Consensus        15 GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (160)
                      ++-.=+.++++.|.+.|+++.  ++++..+.+..         .|+....+... ..                 ..+.+.
T Consensus        10 ~~k~~~~~~~~~l~~~G~~l~--aT~gT~~~l~~---------~gi~~~~v~~~-~~-----------------~~~~i~   60 (110)
T cd01424          10 RDKPEAVEIAKRLAELGFKLV--ATEGTAKYLQE---------AGIPVEVVNKV-SE-----------------GRPNIV   60 (110)
T ss_pred             CcHhHHHHHHHHHHHCCCEEE--EchHHHHHHHH---------cCCeEEEEeec-CC-----------------CchhHH
Confidence            355668899999999999883  56665555543         36665443211 00                 112344


Q ss_pred             HHHHHHhcCCCCCccEEEecCC-------CccHHHHHHHhCCccEE
Q 040291           95 ELIEDINSREDEKLDCFIADGY-------MAWSMEVAKKMNVRGAL  133 (160)
Q Consensus        95 ~ll~~l~~~~~~~~d~vI~D~~-------~~~~~~~A~~lgiP~i~  133 (160)
                      +++++      .++|+||.-+-       ..+..-.|-++|||.++
T Consensus        61 ~~i~~------~~id~vIn~~~~~~~~~~~~~iRR~Av~~~ipl~T  100 (110)
T cd01424          61 DLIKN------GEIQLVINTPSGKRAIRDGFSIRRAALEYKVPYFT  100 (110)
T ss_pred             HHHHc------CCeEEEEECCCCCccCccHHHHHHHHHHhCCCEEe
Confidence            44443      68999997432       23356689999999985

CSP, a CarA and CarB heterodimer, catalyzes the production of carbamoyl phosphate which is subsequently employed in the metabolic pathways responsible for the synthesis of pyrimidine nucleotides or arginine. The MGS-like domain is the C-terminal domain of CarB and appears to play a regulatory role in CPS function by binding allosteric effector molecules, including UMP and ornithine.

>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length

Probab=81.01  E-value=4  Score=24.63  Aligned_cols=34  Identities=24%  Similarity=0.220  Sum_probs=29.5

Q ss_pred             CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEE
Q 040291            4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFV   37 (160)
Q Consensus         4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~   37 (160)
                      .-++++..+...|..-+.++|+.|+++|+.|...
T Consensus        16 k~~v~i~HG~~eh~~ry~~~a~~L~~~G~~V~~~   49 (79)
T PF12146_consen   16 KAVVVIVHGFGEHSGRYAHLAEFLAEQGYAVFAY   49 (79)
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHHHHhCCCEEEEE
Confidence            3577788888999999999999999999998754

Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.

>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2

Probab=80.96  E-value=1.6  Score=32.35  Aligned_cols=24  Identities=29%  Similarity=0.383  Sum_probs=19.2

Q ss_pred             HHHHHHHHHHHhCCCEEEEEeCCC
Q 040291           18 IPLLEFSQCLAKQGFRVTFVNTDY   41 (160)
Q Consensus        18 ~P~l~la~~L~~rGh~Vt~~~~~~   41 (160)
                      .-.-.|+++|+++||+|+++++.-
T Consensus        20 dv~~~L~kaL~~~G~~V~Vi~P~y   43 (245)
T PF08323_consen   20 DVVGSLPKALAKQGHDVRVIMPKY   43 (245)
T ss_dssp             HHHHHHHHHHHHTT-EEEEEEE-T
T ss_pred             HHHHHHHHHHHhcCCeEEEEEccc
Confidence            456789999999999999999864

4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A ....

>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides

Probab=80.80  E-value=9.8  Score=26.99  Aligned_cols=94  Identities=15%  Similarity=0.174  Sum_probs=44.1

Q ss_pred             CCCCCChHHHHHHHHHHHhC--CCEEEEEeCCCCh-hhHHhhhccCCCCCCCeeeeecCCCCCCCCCcccHHHHHHHHHH
Q 040291           11 IPAQGHVIPLLEFSQCLAKQ--GFRVTFVNTDYDH-KRIMESLEGKNDLGEQIRLVSIPDGMEPWEDRNDFGKLFEKVLQ   87 (160)
Q Consensus        11 ~p~~GH~~P~l~la~~L~~r--Gh~Vt~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~   87 (160)
                      ..+.|=++-..+|+++|.++  |++|.+-++...- +...+.++      +.+....+|-+.+                 
T Consensus        28 a~SvGE~~a~~~Li~~l~~~~p~~~illT~~T~tg~~~~~~~~~------~~v~~~~~P~D~~-----------------   84 (186)
T PF04413_consen   28 AASVGEVNAARPLIKRLRKQRPDLRILLTTTTPTGREMARKLLP------DRVDVQYLPLDFP-----------------   84 (186)
T ss_dssp             -SSHHHHHHHHHHHHHHTT---TS-EEEEES-CCHHHHHHGG-G------GG-SEEE---SSH-----------------
T ss_pred             ECCHHHHHHHHHHHHHHHHhCCCCeEEEEecCCchHHHHHHhCC------CCeEEEEeCccCH-----------------
Confidence            45678899999999999987  8888875553332 22322111      2333333332210                 


Q ss_pred             hccHHHHHHHHHHhcCCCCCccEEE-ecC-CCccHHHHHHHhCCccEEEcc
Q 040291           88 VMPGKLEELIEDINSREDEKLDCFI-ADG-YMAWSMEVAKKMNVRGALFWP  136 (160)
Q Consensus        88 ~~~~~~~~ll~~l~~~~~~~~d~vI-~D~-~~~~~~~~A~~lgiP~i~~~~  136 (160)
                         ...+.+++.      .+||++| .+. +++.....|++.|||.+.+..
T Consensus        85 ---~~~~rfl~~------~~P~~~i~~EtElWPnll~~a~~~~ip~~LvNa  126 (186)
T PF04413_consen   85 ---WAVRRFLDH------WRPDLLIWVETELWPNLLREAKRRGIPVVLVNA  126 (186)
T ss_dssp             ---HHHHHHHHH------H--SEEEEES----HHHHHH-----S-EEEEEE
T ss_pred             ---HHHHHHHHH------hCCCEEEEEccccCHHHHHHHhhcCCCEEEEee
Confidence               123445555      3677655 555 445566788999999998754

Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.

>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria

Probab=80.20  E-value=5  Score=30.39  Aligned_cols=38  Identities=13%  Similarity=-0.013  Sum_probs=27.0

Q ss_pred             eEEEEcCCCC-CChHHHHHHHHHHHhCCCEEEEEeCCCC
Q 040291            5 HVLVLPIPAQ-GHVIPLLEFSQCLAKQGFRVTFVNTDYD   42 (160)
Q Consensus         5 ~i~~~~~p~~-GH~~P~l~la~~L~~rGh~Vt~~~~~~~   42 (160)
                      ||++++.-.. +--.-+..+++.|.++||+|++++....
T Consensus         1 ki~~~~~~~~~~~~~~~~~~~~~L~~~g~~v~v~~~~~~   39 (355)
T cd03799           1 KIAYLVKEFPRLSETFILREILALEAAGHEVEIFSLRPP   39 (355)
T ss_pred             CEEEECCCCCCcchHHHHHHHHHHHhCCCeEEEEEecCc
Confidence            3555552222 2446688999999999999999987643

amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.

>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds

Probab=80.19  E-value=24  Score=26.92  Aligned_cols=29  Identities=14%  Similarity=0.178  Sum_probs=20.1

Q ss_pred             CCccEEEecCCC--ccHHHHHHHhCCccEEE
Q 040291          106 EKLDCFIADGYM--AWSMEVAKKMNVRGALF  134 (160)
Q Consensus       106 ~~~d~vI~D~~~--~~~~~~A~~lgiP~i~~  134 (160)
                      .+||+|..-...  ..+..+++++|+|++..
T Consensus        81 ~~~dvvh~~~~~~~~~~~~~~~~~~~p~i~~  111 (367)
T cd05844          81 HRPDLVHAHFGFDGVYALPLARRLGVPLVVT  111 (367)
T ss_pred             hCCCEEEeccCchHHHHHHHHHHcCCCEEEE
Confidence            579988864322  22456789999999874

The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center

>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I

Probab=80.10  E-value=3.9  Score=31.18  Aligned_cols=43  Identities=14%  Similarity=0.199  Sum_probs=37.9

Q ss_pred             eEEEEcCCCCCChHHHHHHHHHHHhC--CCEEEEEeCCCChhhHH
Q 040291            5 HVLVLPIPAQGHVIPLLEFSQCLAKQ--GFRVTFVNTDYDHKRIM   47 (160)
Q Consensus         5 ~i~~~~~p~~GH~~P~l~la~~L~~r--Gh~Vt~~~~~~~~~~~~   47 (160)
                      ||+++-....|++.-..++.++|.++  +.+||+++.+.+.+.++
T Consensus         1 ~ILiir~~~iGD~vl~~p~l~~Lr~~~P~a~I~~l~~~~~~~~~~   45 (319)
T TIGR02193         1 RILIVKTSSLGDVIHTLPALTDIKRALPDVEIDWVVEEGFADIVR   45 (319)
T ss_pred             CEEEEecccHHHHHHHHHHHHHHHHhCCCCEEEEEEChhHhhhhh
Confidence            58889999999999999999999998  99999999987765543

This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	160
2pq6_A	482	Crystal Structure Of Medicago Truncatula Ugt85h2- I		2e-20
2vce_A	480	Characterization And Engineering Of The Bifunctiona		4e-07

>pdb|2PQ6|A Chain A, Crystal Structure Of Medicago Truncatula Ugt85h2- Insights Into The Structural Basis Of A Multifunctional (Iso) Flavonoid Glycosyltransferase Length = 482

Iteration: 1
 Score = 94.7 bits (234), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 52/161 (32%), Positives = 90/161 (55%), Gaps = 6/161 (3%)
Query: 3   RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKN-DLGEQIR 61
           +PHV+++P P QGH+ PL + ++ L  +GF +TFVNT+Y+HKR+++S   K  D      
Sbjct: 8   KPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFN 67
Query: 62  LVSIPDGMEPWEDRNDFGK----LFEKVLQVMPGKLEELIEDIN-SREDEKLDCFIADGY 116
             SIPDG+ P E   D  +    L + V +       EL+  +N S     + C ++D  
Sbjct: 68  FESIPDGLTPMEGDGDVSQDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCC 127
Query: 117 MAWSMEVAKKMNVRGALFWPSSAASVALLFHIPKLIDDGII 157
           M+++++ A++  +   L++ SSA S+  + H    ++ GII
Sbjct: 128 MSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSFVERGII 168

>pdb|2VCE|A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants Length = 480

Iteration: 1
 Score = 50.8 bits (120), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 43/167 (25%), Positives = 72/167 (43%), Gaps = 38/167 (22%)
Query: 4   PHVLVLPIPAQGHVIPLLEFSQCLAK-QGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRL 62
           PHV ++P P  GH+IPL+EF++ L    G  VTFV             EG     ++  L
Sbjct: 7   PHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAG----------EGPPSKAQRTVL 56
Query: 63  VSIPDGME----PWEDRNDFGKLFEKVLQVMPGKLEELIEDINSREDEKL----DCFIAD 114
            S+P  +     P  D  D              ++E  I    +R + +L    D F+  
Sbjct: 57  DSLPSSISSVFLPPVDLTDLSS---------STRIESRISLTVTRSNPELRKVFDSFVEG 107
Query: 115 GYMAWSM----------EVAKKMNVRGALFWPSSAASVALLFHIPKL 151
           G +  ++          +VA + +V   +F+P++A  ++   H+PKL
Sbjct: 108 GRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKL 154

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	160
2pq6_A	482	UDP-glucuronosyl/UDP-glucosyltransferase; glycosyl	1e-56
2c1x_A	456	UDP-glucose flavonoid 3-O glycosyltransferase; WIN	2e-49
3hbf_A	454	Flavonoid 3-O-glucosyltransferase; glycosyltransfe	1e-48
2acv_A	463	Triterpene UDP-glucosyl transferase UGT71G1; glyco	4e-43
2vch_A	480	Hydroquinone glucosyltransferase; glycosyltransfer	4e-40
2iyf_A	430	OLED, oleandomycin glycosyltransferase; antibiotic	5e-10
2iya_A	424	OLEI, oleandomycin glycosyltransferase; carbohydra	7e-10
3ia7_A	402	CALG4; glycosysltransferase, calicheamicin, enediy	2e-09
3rsc_A	415	CALG2; TDP, enediyne, structural genomics, PSI-2,	3e-07
3oti_A	398	CALG3; calicheamicin, TDP, structural genomics, PS	3e-04
1rrv_A	416	Glycosyltransferase GTFD; GT-B, glycosyltransferas	9e-04

>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10 Length = 482

 Score =  183 bits (466), Expect = 1e-56
 Identities = 52/163 (31%), Positives = 89/163 (54%), Gaps = 6/163 (3%)

Query: 3   RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLG-EQIR 61
           +PHV+++P P QGH+ PL + ++ L  +GF +TFVNT+Y+HKR+++S   K   G     
Sbjct: 8   KPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFN 67

Query: 62  LVSIPDGMEPWEDR----NDFGKLFEKVLQVMPGKLEELIEDIN-SREDEKLDCFIADGY 116
             SIPDG+ P E       D   L + V +       EL+  +N S     + C ++D  
Sbjct: 68  FESIPDGLTPMEGDGDVSQDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCC 127

Query: 117 MAWSMEVAKKMNVRGALFWPSSAASVALLFHIPKLIDDGIIDS 159
           M+++++ A++  +   L++ SSA S+  + H    ++ GII  
Sbjct: 128 MSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSFVERGIIPF 170

>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A* Length = 456

 Score =  163 bits (416), Expect = 2e-49
 Identities = 32/161 (19%), Positives = 62/161 (38%), Gaps = 5/161 (3%)

Query: 2   NRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTF--VNTDYDHKRIMESLEGKNDLGEQ 59
             PHV VL  P   H  PLL   + LA       F   +T   +  I       + +   
Sbjct: 6   TNPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHD--SMHTMQCN 63

Query: 60  IRLVSIPDGM-EPWEDRNDFGKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMA 118
           I+   I DG+ E +       +  E   +  P    + +    +     + C +AD ++ 
Sbjct: 64  IKSYDISDGVPEGYVFAGRPQEDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIW 123

Query: 119 WSMEVAKKMNVRGALFWPSSAASVALLFHIPKLIDDGIIDS 159
           ++ ++A +M V    FW +   S++   +I ++ +   +  
Sbjct: 124 FAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIREKIGVSG 164

>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} PDB: 3hbj_A* Length = 454

 Score =  161 bits (410), Expect = 1e-48
 Identities = 28/162 (17%), Positives = 65/162 (40%), Gaps = 8/162 (4%)

Query: 2   NRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTF---VNTDYDHKRIMESLEGKNDLGE 58
           N  HV VL  P   H  PLL   + +A +  +VTF     T  +      S    N+   
Sbjct: 12  NLLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRS----NEFLP 67

Query: 59  QIRLVSIPDGM-EPWEDRNDFGKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYM 117
            I+  ++ DG+ + +    +  +     ++ M    + +I++  +   + + C + D + 
Sbjct: 68  NIKYYNVHDGLPKGYVSSGNPREPIFLFIKAMQENFKHVIDEAVAETGKNITCLVTDAFF 127

Query: 118 AWSMEVAKKMNVRGALFWPSSAASVALLFHIPKLIDDGIIDS 159
            +  ++A++M+ +    W +   S+    +   + +      
Sbjct: 128 WFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLIREKTGSKE 169

>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A* Length = 463

 Score =  147 bits (373), Expect = 4e-43
 Identities = 27/161 (16%), Positives = 63/161 (39%), Gaps = 7/161 (4%)

Query: 2   NRPHVLVLPIPAQGHVIPLLEFSQCLAKQ--GFRVTFVNTDYDHKRIMES-LEGKNDLGE 58
               ++ +P P  GH+   LEF++ L        +T     +      +S ++       
Sbjct: 8   KNSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVLASQP 67

Query: 59  QIRLVSIPDGMEPWEDR-NDFGKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYM 117
           QI+L+ +P+   P ++            L+ +   ++  I+ I S    K+   + D + 
Sbjct: 68  QIQLIDLPEVEPPPQELLKSPEFYILTFLESLIPHVKATIKTILSN---KVVGLVLDFFC 124

Query: 118 AWSMEVAKKMNVRGALFWPSSAASVALLFHIPKLIDDGIID 158
              ++V  +  +   LF  S+   ++L+  +     + + D
Sbjct: 125 VSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQIEEVFD 165

>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A* Length = 480

 Score =  139 bits (353), Expect = 4e-40
 Identities = 34/159 (21%), Positives = 64/159 (40%), Gaps = 4/159 (2%)

Query: 2   NRPHVLVLPIPAQGHVIPLLEFSQCLAKQ-GFRVTFVNTDYDHKRIMESLEGKNDLGEQI 60
             PHV ++P P  GH+IPL+EF++ L    G  VTFV          +     + L   I
Sbjct: 5   KTPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQR-TVLDSLPSSI 63

Query: 61  RLVSIPD-GMEPWEDRNDFGKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAW 119
             V +P   +                +     +L ++ +             + D +   
Sbjct: 64  SSVFLPPVDLTDLSSSTRIESRISLTVTRSNPELRKVFDSFVE-GGRLPTALVVDLFGTD 122

Query: 120 SMEVAKKMNVRGALFWPSSAASVALLFHIPKLIDDGIID 158
           + +VA + +V   +F+P++A  ++   H+PKL +    +
Sbjct: 123 AFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDETVSCE 161

>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus} Length = 430

 Score = 55.6 bits (134), Expect = 5e-10
 Identities = 28/145 (19%), Positives = 47/145 (32%), Gaps = 17/145 (11%)

Query: 1   MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQI 60
               H+ +  I A GHV P LE  + L  +G RVT+        ++          G   
Sbjct: 5   TTPAHIAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPVFADKV-------AATG--P 55

Query: 61  RLVSIPDGMEPWEDRNDFGK-----LFEKVLQVMPGKLEELIEDINSREDEKLDCFIADG 115
           R V     +   +   +          E  L      L +L +      D+  D  + D 
Sbjct: 56  RPVLYHSTLPGPDADPEAWGSTLLDNVEPFLNDAIQALPQLADAY---ADDIPDLVLHDI 112

Query: 116 YMAWSMEVAKKMNVRGALFWPSSAA 140
               +  +A++  V      P+  A
Sbjct: 113 TSYPARVLARRWGVPAVSLSPNLVA 137

>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus} Length = 424

 Score = 55.5 bits (134), Expect = 7e-10
 Identities = 29/150 (19%), Positives = 51/150 (34%), Gaps = 9/150 (6%)

Query: 1   MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMES-LEGKNDLGEQ 59
           +   H+    IP  GHV P L   Q L  +G RV++  TD    ++  +           
Sbjct: 10  VTPRHISFFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEFAAQVKAAGATPVV-YDSI 68

Query: 60  IRLVSIPDGMEPWEDRNDFGKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAW 119
           +   S P+   P     D        L      L +L +      D++ D  + D     
Sbjct: 69  LPKESNPEESWPE----DQESAMGLFLDEAVRVLPQLEDAY---ADDRPDLIVYDIASWP 121

Query: 120 SMEVAKKMNVRGALFWPSSAASVALLFHIP 149
           +  + +K ++      P+  A       +P
Sbjct: 122 APVLGRKWDIPFVQLSPTFVAYEGFEEDVP 151

>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora} Length = 402

 Score = 54.0 bits (130), Expect = 2e-09
 Identities = 26/157 (16%), Positives = 54/157 (34%), Gaps = 9/157 (5%)

Query: 1   MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMES-LEGKNDLGEQ 59
           M + H+L   +   GHV P L     LA++G R+T+V T      +  +  E       +
Sbjct: 2   MRQRHILFANVQGHGHVYPSLGLVSELARRGHRITYVTTPLFADEVKAAGAEVV-LYKSE 60

Query: 60  IRLVSIPDGMEPWEDRNDFGKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAW 119
                +P+ ++  +       ++ +    +    EE +       D   D  + D +   
Sbjct: 61  FDTFHVPEVVKQEDAETQLHLVYVRENVAILRAAEEAL------GDNPPDLVVYDVFPFI 114

Query: 120 SME-VAKKMNVRGALFWPSSAASVALLFHIPKLIDDG 155
           +   +A + +          AA+            +G
Sbjct: 115 AGRLLAARWDRPAVRLTGGFAANEHYSLFKELWKSNG 151

>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A* Length = 415

 Score = 47.4 bits (113), Expect = 3e-07
 Identities = 23/152 (15%), Positives = 51/152 (33%), Gaps = 19/152 (12%)

Query: 5   HVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVS 64
           H+L++ + + G ++P L     L ++G RV++V T       + +  G         +V 
Sbjct: 22  HLLIVNVASHGLILPTLTVVTELVRRGHRVSYV-TAGGFAEPVRAA-G-------ATVVP 72

Query: 65  IP------DGMEPWEDRNDFGKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGY-M 117
                   D  E +   +   +     L+     L    E +   + +  D  + D +  
Sbjct: 73  YQSEIIDADAAEVFGSDDLGVRPHLMYLRENVSVLRATAEAL---DGDVPDLVLYDDFPF 129

Query: 118 AWSMEVAKKMNVRGALFWPSSAASVALLFHIP 149
                +A +          + A++    F   
Sbjct: 130 IAGQLLAARWRRPAVRLSAAFASNEHYSFSQD 161

>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A* Length = 398

 Score = 39.0 bits (91), Expect = 3e-04
 Identities = 20/152 (13%), Positives = 44/152 (28%), Gaps = 18/152 (11%)

Query: 1   MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDY------------DHKRIME 48
                VL +  P  GH+ PL++ +      G  V     ++            D      
Sbjct: 18  GRHMRVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVAEHADRAAAAGLEVVDVAPDYS 77

Query: 49  SLEGKNDLGEQIRLVSIPDGMEPWEDRNDFGKLFEKVLQVMPGKLEELIEDINSREDEKL 108
           +++    + +     +      P  D  ++G     V + +      L++D         
Sbjct: 78  AVKVFEQVAKDNPRFAETVATRPAIDLEEWGVQIAAVNRPLVDGTMALVDDYRP------ 131

Query: 109 DCFIADGYMAWSMEVAKKMNVRGALFWPSSAA 140
           D  + +      +  A +  V       S+  
Sbjct: 132 DLVVYEQGATVGLLAADRAGVPAVQRNQSAWR 163

>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5 Length = 416

 Score = 37.5 bits (87), Expect = 9e-04
 Identities = 17/145 (11%), Positives = 39/145 (26%), Gaps = 16/145 (11%)

Query: 1   MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQI 60
           M    VL+     +G V   +  +  L   G +          +  +  + G       +
Sbjct: 1   MR---VLLSVCGTRGDVEIGVALADRLKALGVQTRMC-APPAAEERLAEV-G-------V 48

Query: 61  RLVSIPDGMEPWEDRNDFGKLFEKVLQVMPGKLEELIEDINS--REDEKLDCFIADGYMA 118
             V +                 E+  ++    +E   + +         +          
Sbjct: 49  PHVPVGLPQHMMLQEGMPPPPPEEEQRLAAMTVEMQFDAVPGAAEGCAAVVAVGDLAAAT 108

Query: 119 WSMEVAKKMNVR--GALFWPSSAAS 141
               VA+K+ +    ++  P   AS
Sbjct: 109 GVRSVAEKLGLPFFYSVPSPVYLAS 133

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	160
3hbf_A	454	Flavonoid 3-O-glucosyltransferase; glycosyltransfe	99.95
2pq6_A	482	UDP-glucuronosyl/UDP-glucosyltransferase; glycosyl	99.94
2vch_A	480	Hydroquinone glucosyltransferase; glycosyltransfer	99.9
2acv_A	463	Triterpene UDP-glucosyl transferase UGT71G1; glyco	99.9
2c1x_A	456	UDP-glucose flavonoid 3-O glycosyltransferase; WIN	99.88
2iya_A	424	OLEI, oleandomycin glycosyltransferase; carbohydra	99.84
4amg_A	400	Snogd; transferase, polyketide biosynthesis, GT1 f	99.77
3ia7_A	402	CALG4; glycosysltransferase, calicheamicin, enediy	99.74
1iir_A	415	Glycosyltransferase GTFB; rossmann fold; 1.80A {Am	99.72
2iyf_A	430	OLED, oleandomycin glycosyltransferase; antibiotic	99.72
3rsc_A	415	CALG2; TDP, enediyne, structural genomics, PSI-2,	99.68
1rrv_A	416	Glycosyltransferase GTFD; GT-B, glycosyltransferas	99.65
2yjn_A	441	ERYCIII, glycosyltransferase; transferase, cytochr	99.64
3oti_A	398	CALG3; calicheamicin, TDP, structural genomics, PS	99.59
2p6p_A	384	Glycosyl transferase; X-RAY-diffraction,urdamycina	99.59
3h4t_A	404	Glycosyltransferase GTFA, glycosyltransferase; van	99.55
4fzr_A	398	SSFS6; structural genomics, PSI-biology, protein s	99.54
3tsa_A	391	SPNG, NDP-rhamnosyltransferase; glycosyltransferas	99.5
3otg_A	412	CALG1; calicheamicin, TDP, structural genomics, PS	99.41
3s2u_A	365	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape	99.23
1f0k_A	364	MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe	98.68
3fro_A	439	GLGA glycogen synthase; glycosyltransferase family	97.43
3c48_A	438	Predicted glycosyltransferases; retaining glycosyl	97.33
2iuy_A	342	Avigt4, glycosyltransferase; antibiotics, family G	97.25
2r60_A	499	Glycosyl transferase, group 1; rossmann-fold; 1.80	97.22
3okp_A	394	GDP-mannose-dependent alpha-(1-6)-phosphatidylino	97.07
1v4v_A	376	UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, t	96.38
2jjm_A	394	Glycosyl transferase, group 1 family protein; anth	96.25
2gek_A	406	Phosphatidylinositol mannosyltransferase (PIMA); G	96.22
3dzc_A	396	UDP-N-acetylglucosamine 2-epimerase; structural ge	96.18
3ot5_A	403	UDP-N-acetylglucosamine 2-epimerase; structural ge	96.15
2iw1_A	374	Lipopolysaccharide core biosynthesis protein RFAG;	95.88
3beo_A	375	UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a	95.85
1vgv_A	384	UDP-N-acetylglucosamine 2-epimerase; structural ge	95.7
2x6q_A	416	Trehalose-synthase TRET; biosynthetic protein; 2.2	95.22
1ccw_A	137	Protein (glutamate mutase); coenzyme B12, radical	94.77
1psw_A	348	ADP-heptose LPS heptosyltransferase II; structural	94.19
2x0d_A	413	WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge	93.89
3vue_A	536	GBSS-I, granule-bound starch synthase 1, chloropla	93.35
2hy7_A	406	Glucuronosyltransferase GUMK; glycosyltransferases	92.91
3hbm_A	282	UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter je	92.69
3s28_A	816	Sucrose synthase 1; glycosyltransferase, sucrose m	92.6
3tov_A	349	Glycosyl transferase family 9; structural genomics	92.31
1rzu_A	485	Glycogen synthase 1; glycosyl-transferase, GT-B fo	92.13
2qzs_A	485	Glycogen synthase; glycosyl-transferase, GT-B fold	92.0
4hwg_A	385	UDP-N-acetylglucosamine 2-epimerase; ssgcid, struc	91.87
2wqk_A	251	5'-nucleotidase SURE; SURE protein, putative acid	91.28
1g5t_A	196	COB(I)alamin adenosyltransferase; P-loop protein,	91.21
1id1_A	153	Putative potassium channel protein; RCK domain, E.	90.66
3qjg_A	175	Epidermin biosynthesis protein EPID; structural ge	90.25
2phj_A	251	5'-nucleotidase SURE; SURE protein, putative acid	89.44
2yxb_A	161	Coenzyme B12-dependent mutase; alpha/beta, structu	89.35
1y80_A	210	Predicted cobalamin binding protein; corrinoid, fa	89.27
2i2x_B	258	MTAC, methyltransferase 1; TIM barrel and helix bu	88.72
3zqu_A	209	Probable aromatic acid decarboxylase; lyase; HET:	88.37
1mvl_A	209	PPC decarboxylase athal3A; flavoprotein, active si	88.08
3mcu_A	207	Dipicolinate synthase, B chain; NESG, structural g	87.94
3lqk_A	201	Dipicolinate synthase subunit B; flavoprotein, PSI	87.42
3ezx_A	215	MMCP 1, monomethylamine corrinoid protein 1; N ter	87.03
1p3y_1	194	MRSD protein; flavoprotein, FMN, rossmann fold, HF	85.09
2ejb_A	189	Probable aromatic acid decarboxylase; phenylacryli	85.03
2q5c_A	196	NTRC family transcriptional regulator; structural	84.98
1qzu_A	206	Hypothetical protein MDS018; alpha-beta sandwich,	84.92
3bfv_A	271	CAPA1, CAPB2, membrane protein CAPA1, protein tyro	84.79
1sbz_A	197	Probable aromatic acid decarboxylase; FMN binding,	84.55
1g63_A	181	Epidermin modifying enzyme EPID; alpha, beta prote	83.8
3cio_A	299	ETK, tyrosine-protein kinase ETK; WZC, escherichia	83.55
2lpm_A	123	Two-component response regulator; transcription re	82.93
3qxc_A	242	Dethiobiotin synthetase; DTBS, structural genomics	81.5
1e2b_A	106	Enzyme IIB-cellobiose; phosphotransferase system,	81.24
3to5_A	134	CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, p	80.68
3lrx_A	158	Putative hydrogenase; alpha-beta protein, structur	80.15

>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*

Probab=99.95  E-value=2.6e-27  Score=187.55  Aligned_cols=149  Identities=16%  Similarity=0.333  Sum_probs=111.7

Q ss_pred             CCeEEEEcCCCCCChHHHHHHHHHHHhCC--CEEEEEeCCCChhhHHhhhccCCCCCCCeeeeecCCCCCCCC-CcccHH
Q 040291            3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQG--FRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIPDGMEPWE-DRNDFG   79 (160)
Q Consensus         3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rG--h~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~-~~~~~~   79 (160)
                      +.||+++|+|++||++||++|||.|++||  +.|||++++.+..++.+..   ....++++|+.+|++++++. ...+..
T Consensus        13 ~~hvv~~P~p~~GHi~P~l~Lak~L~~~g~~~~vT~~~t~~~~~~~~~~~---~~~~~~i~~~~ipdglp~~~~~~~~~~   89 (454)
T 3hbf_A           13 LLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRS---NEFLPNIKYYNVHDGLPKGYVSSGNPR   89 (454)
T ss_dssp             CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHSCSSS---SCCCTTEEEEECCCCCCTTCCCCSCTT
T ss_pred             CCEEEEEcCCcccHHHHHHHHHHHHHhCCCCEEEEEEeCHHHHHhhhccc---ccCCCCceEEecCCCCCCCccccCChH
Confidence            67999999999999999999999999999  9999999976554432211   01135799999998877652 222222


Q ss_pred             HHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEecCCCccHHHHHHHhCCccEEEccchHHHHHHHHchhhHHhc
Q 040291           80 KLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAWSMEVAKKMNVRGALFWPSSAASVALLFHIPKLIDD  154 (160)
Q Consensus        80 ~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~~~~~~~~~~~~~~~l~~~  154 (160)
                      ..+..+.+.+.+.+++.++++.++.+.++||||+|.+++|+.++|+++|||++.||+++++.++.++|++.+.++
T Consensus        90 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~~~~~  164 (454)
T 3hbf_A           90 EPIFLFIKAMQENFKHVIDEAVAETGKNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLIREK  164 (454)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHHHHhh
Confidence            222333333344455555554221125799999999999999999999999999999999999999999988765

>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10

Probab=99.94  E-value=8e-27  Score=186.20  Aligned_cols=158  Identities=32%  Similarity=0.612  Sum_probs=117.5

Q ss_pred             CCCCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhHHhhhccCC-CCCCCeeeeecCCCCCCCC----Cc
Q 040291            1 MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKN-DLGEQIRLVSIPDGMEPWE----DR   75 (160)
Q Consensus         1 m~~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~l~~~~~~~~----~~   75 (160)
                      |+++||+++|+|++||++|+++||++|++|||+|||++++.+...+.+...... ...++++|+.++++++..+    ..
T Consensus         6 ~~~~~vl~~p~p~~GHi~P~l~La~~L~~rG~~VT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~lp~~~~~~~~~   85 (482)
T 2pq6_A            6 NRKPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIPDGLTPMEGDGDVS   85 (482)
T ss_dssp             --CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC------------CEEEEEECCCCC---------
T ss_pred             CCCCEEEEecCccchhHHHHHHHHHHHHhCCCeEEEEeCCchhhhhccccccccccCCCceEEEECCCCCCCcccccCcc
Confidence            456899999999999999999999999999999999999876554432100000 0014799999987665421    12


Q ss_pred             ccHHHHHHHHHHhccHHHHHHHHHHhcCC-CCCccEEEecCCCccHHHHHHHhCCccEEEccchHHHHHHHHchhhHHhc
Q 040291           76 NDFGKLFEKVLQVMPGKLEELIEDINSRE-DEKLDCFIADGYMAWSMEVAKKMNVRGALFWPSSAASVALLFHIPKLIDD  154 (160)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~ll~~l~~~~-~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~~~~~~~~~~~~~~~l~~~  154 (160)
                      .+...++..+.+.+.+.++++++.+.+.. +.++||||+|.++.|+..+|+++|||++.++++++...+.+++++.+...
T Consensus        86 ~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~  165 (482)
T 2pq6_A           86 QDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSFVER  165 (482)
T ss_dssp             CCHHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHHHTTHHHHHHT
T ss_pred             hhHHHHHHHHHHHhhHHHHHHHHHHhhhccCCCceEEEECCcchhHHHHHHHcCCCEEEEecccHHHHHHHHHHHHHHhc
Confidence            23444555554667788999999886420 15899999999999999999999999999999999998888888887777


Q ss_pred             CCCC
Q 040291          155 GIID  158 (160)
Q Consensus       155 ~~~~  158 (160)
                      |++|
T Consensus       166 ~~~p  169 (482)
T 2pq6_A          166 GIIP  169 (482)
T ss_dssp             TCSS
T ss_pred             CCCC
Confidence            7765

>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*

Probab=99.90  E-value=5.9e-23  Score=163.87  Aligned_cols=147  Identities=25%  Similarity=0.429  Sum_probs=109.7

Q ss_pred             CCeEEEEcCCCCCChHHHHHHHHHHHhC-CCEEEEEeCCCC--hhhHHhhhccCCCCCCCeeeeecCCCCCCC-CCcccH
Q 040291            3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQ-GFRVTFVNTDYD--HKRIMESLEGKNDLGEQIRLVSIPDGMEPW-EDRNDF   78 (160)
Q Consensus         3 ~~~i~~~~~p~~GH~~P~l~la~~L~~r-Gh~Vt~~~~~~~--~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~-~~~~~~   78 (160)
                      ++||+++|+|++||++|+++||++|++| ||+|||+++...  ...+.+...   ....+++|+.++++.... ....+.
T Consensus         6 ~~~vl~~p~p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~~~~~~~~~~~~~---~~~~~i~~~~l~~~~~~~~~~~~~~   82 (480)
T 2vch_A            6 TPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLD---SLPSSISSVFLPPVDLTDLSSSTRI   82 (480)
T ss_dssp             CCEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHHHC----CCTTEEEEECCCCCCTTSCTTCCH
T ss_pred             CcEEEEecCcchhHHHHHHHHHHHHHhCCCCEEEEEECCCcchhhhhhhhcc---ccCCCceEEEcCCCCCCCCCCchhH
Confidence            4799999999999999999999999998 999999999873  333332100   002589999998642111 111233


Q ss_pred             HHHHHHHHHhccHHHHHHHHHHhcCCCCCc-cEEEecCCCccHHHHHHHhCCccEEEccchHHHHHHHHchhhHHhc
Q 040291           79 GKLFEKVLQVMPGKLEELIEDINSREDEKL-DCFIADGYMAWSMEVAKKMNVRGALFWPSSAASVALLFHIPKLIDD  154 (160)
Q Consensus        79 ~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~-d~vI~D~~~~~~~~~A~~lgiP~i~~~~~~~~~~~~~~~~~~l~~~  154 (160)
                      ...+......+.+.++++++++.+ . .++ ||||+|.++.|+..+|+++|||++.++++++...+.++|+|.+.+.
T Consensus        83 ~~~~~~~~~~~~~~l~~ll~~~~~-~-~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~  157 (480)
T 2vch_A           83 ESRISLTVTRSNPELRKVFDSFVE-G-GRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDET  157 (480)
T ss_dssp             HHHHHHHHHTTHHHHHHHHHHHHH-T-TCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhhhHHHHHHHHHhcc-C-CCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHHHHHHHHhc
Confidence            332223344566778888887642 1 478 9999999999999999999999999999999999999998877653

>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*

Probab=99.90  E-value=7.9e-23  Score=162.47  Aligned_cols=143  Identities=18%  Similarity=0.301  Sum_probs=107.6

Q ss_pred             CCeEEEEcCCCCCChHHHHHHHHHHHhC--CCEEEEEeCCCCh-----hhHHhhhccCCCCCCCeeeeecCCC-CCCCCC
Q 040291            3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQ--GFRVTFVNTDYDH-----KRIMESLEGKNDLGEQIRLVSIPDG-MEPWED   74 (160)
Q Consensus         3 ~~~i~~~~~p~~GH~~P~l~la~~L~~r--Gh~Vt~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~~l~~~-~~~~~~   74 (160)
                      ++||+++|+|++||++|+++||++|++|  ||+|||++++...     +.+.+ ..   ...++++|+.+|++ .+..+.
T Consensus         9 ~~~vv~~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~~~~~~-~~---~~~~~i~~~~lp~~~~~~~~~   84 (463)
T 2acv_A            9 NSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKS-VL---ASQPQIQLIDLPEVEPPPQEL   84 (463)
T ss_dssp             CEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHH-HH---CSCTTEEEEECCCCCCCCGGG
T ss_pred             CCEEEEEcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhhhhhhh-cc---cCCCCceEEECCCCCCCcccc
Confidence            5799999999999999999999999999  9999999998753     11211 11   11258999999875 232111


Q ss_pred             cccHHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEecCCCccHHHHHHHhCCccEEEccchHHHHHHHHchhhHH
Q 040291           75 RNDFGKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAWSMEVAKKMNVRGALFWPSSAASVALLFHIPKLI  152 (160)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~~~~~~~~~~~~~~~l~  152 (160)
                      .......+......+.+.++++++++.   +.++||||+|.++.|+..+|+++|||++.++++++..++.++++|.+.
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~ll~~~~---~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~  159 (463)
T 2acv_A           85 LKSPEFYILTFLESLIPHVKATIKTIL---SNKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQ  159 (463)
T ss_dssp             GGSHHHHHHHHHHHTHHHHHHHHHHHC---CTTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGGGSC
T ss_pred             cCCccHHHHHHHHhhhHHHHHHHHhcc---CCCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHHHHhhc
Confidence            111111122233456667888888762   258999999999999999999999999999999999999988888653

>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*

Probab=99.88  E-value=3.1e-22  Score=158.80  Aligned_cols=150  Identities=21%  Similarity=0.321  Sum_probs=102.3

Q ss_pred             CCCeEEEEcCCCCCChHHHHHHHHHHHhCC--CEEEEEeCCCChhhHHhhhccCCCCCCCeeeeecCCCCCCCC-CcccH
Q 040291            2 NRPHVLVLPIPAQGHVIPLLEFSQCLAKQG--FRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIPDGMEPWE-DRNDF   78 (160)
Q Consensus         2 ~~~~i~~~~~p~~GH~~P~l~la~~L~~rG--h~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~-~~~~~   78 (160)
                      .++||+++|+|++||++|+++||++|++||  +.||+++++.....+.+...  .....+++++.+++++++.. .....
T Consensus         6 ~~~hvv~~p~p~~GHi~P~l~la~~L~~rGh~v~vt~~~t~~~~~~~~~~~~--~~~~~~i~~~~i~~glp~~~~~~~~~   83 (456)
T 2c1x_A            6 TNPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSM--HTMQCNIKSYDISDGVPEGYVFAGRP   83 (456)
T ss_dssp             -CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC---------CTTEEEEECCCCCCTTCCCCCCT
T ss_pred             CCCEEEEEcCcccchHHHHHHHHHHHHhCCCCeEEEEEeCchhHHHhhcccc--ccCCCceEEEeCCCCCCCcccccCCh
Confidence            358999999999999999999999999996  55688888654333322100  00124799999988765431 11112


Q ss_pred             HHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEecCCCccHHHHHHHhCCccEEEccchHHHHHHHHchhhHHh
Q 040291           79 GKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAWSMEVAKKMNVRGALFWPSSAASVALLFHIPKLID  153 (160)
Q Consensus        79 ~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~~~~~~~~~~~~~~~l~~  153 (160)
                      ......+.+.+.+.++++++++.+..+.++||||+|.++.|+..+|+++|||++.++++++..++.+.+.+.+.+
T Consensus        84 ~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~  158 (456)
T 2c1x_A           84 QEDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIRE  158 (456)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHHHHHH
T ss_pred             HHHHHHHHHHhHHHHHHHHHHHHhccCCCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHhhhHHHHh
Confidence            222222333333445555554432111589999999999999999999999999999999998888877776543

>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}

Probab=99.84  E-value=2.6e-20  Score=145.72  Aligned_cols=127  Identities=19%  Similarity=0.178  Sum_probs=93.2

Q ss_pred             CCCCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhHHhhhccCCCCCCCeeeeecCCCCCCCC-C----c
Q 040291            1 MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIPDGMEPWE-D----R   75 (160)
Q Consensus         1 m~~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~-~----~   75 (160)
                      |.++||+++++|++||++|++.|+++|++|||+||+++++...+.+.+         .+++++.++++++... .    .
T Consensus        10 m~~~~Il~~~~~~~GHv~p~l~la~~L~~~Gh~V~~~~~~~~~~~~~~---------~g~~~~~~~~~~~~~~~~~~~~~   80 (424)
T 2iya_A           10 VTPRHISFFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEFAAQVKA---------AGATPVVYDSILPKESNPEESWP   80 (424)
T ss_dssp             -CCCEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH---------HTCEEEECCCCSCCTTCTTCCCC
T ss_pred             cccceEEEEeCCCCcccchHHHHHHHHHHCCCeEEEEeCHHHHHHHHh---------CCCEEEecCccccccccchhhcc
Confidence            566899999999999999999999999999999999999887665554         3788888876543221 1    1


Q ss_pred             ccHHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEecCCCccHHHHHHHhCCccEEEccchH
Q 040291           76 NDFGKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAWSMEVAKKMNVRGALFWPSSA  139 (160)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~~~~  139 (160)
                      .+....+..+.+......+++.+.+++   .+|||||+|.+..|+..+|+++|||++.+++.++
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~  141 (424)
T 2iya_A           81 EDQESAMGLFLDEAVRVLPQLEDAYAD---DRPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFV  141 (424)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHHHHTTT---SCCSEEEEETTCTHHHHHHHHHTCCEEEEESSCC
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhc---cCCCEEEEcCcccHHHHHHHhcCCCEEEEecccc
Confidence            233232333333222334444444432   6899999999988999999999999999987653

>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*

Probab=99.77  E-value=3.1e-18  Score=132.56  Aligned_cols=124  Identities=15%  Similarity=0.120  Sum_probs=84.7

Q ss_pred             CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhHHhhhccCCCCCCCeeeeecCCCCCC-------CC--
Q 040291            3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIPDGMEP-------WE--   73 (160)
Q Consensus         3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~-------~~--   73 (160)
                      .|||+++++|+.||++|+++||++|++|||+|||++++.+.....          .++.+..+..+...       ..  
T Consensus        22 ~MRIL~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~t~~~~~~~~~----------~g~~~~~~~~~~~~~~~~~~~~~~~   91 (400)
T 4amg_A           22 SMRALFITSPGLSHILPTVPLAQALRALGHEVRYATGGDIRAVAE----------AGLCAVDVSPGVNYAKLFVPDDTDV   91 (400)
T ss_dssp             CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECSSTHHHHT----------TTCEEEESSTTCCSHHHHSCCC---
T ss_pred             CCeEEEECCCchhHHHHHHHHHHHHHHCCCEEEEEeCcchhhHHh----------cCCeeEecCCchhHhhhcccccccc
Confidence            689999999999999999999999999999999999987765332          35666665432211       00  


Q ss_pred             -Cc-----ccHHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEecCCCccHHHHHHHhCCccEEEccchH
Q 040291           74 -DR-----NDFGKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAWSMEVAKKMNVRGALFWPSSA  139 (160)
Q Consensus        74 -~~-----~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~~~~  139 (160)
                       ..     .....+...+.......+.++++.+.+   .+||+||+|.+..|+..+|+++|||++.+...+.
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~~  160 (400)
T 4amg_A           92 TDPMHSEGLGEGFFAEMFARVSAVAVDGALRTARS---WRPDLVVHTPTQGAGPLTAAALQLPCVELPLGPA  160 (400)
T ss_dssp             ---------CHHHHHHHHHHHHHHHHHHHHHHHHH---HCCSEEEECTTCTHHHHHHHHTTCCEEECCSSTT
T ss_pred             ccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHh---cCCCEEEECcchHHHHHHHHHcCCCceeeccccc
Confidence             00     001111112222222233444444433   5899999999999999999999999999876543

>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}

Probab=99.74  E-value=1.7e-17  Score=128.24  Aligned_cols=124  Identities=18%  Similarity=0.229  Sum_probs=89.4

Q ss_pred             CCCCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhHHhhhccCCCCCCCeeeeecCCCCCCCC-----Cc
Q 040291            1 MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIPDGMEPWE-----DR   75 (160)
Q Consensus         1 m~~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~-----~~   75 (160)
                      |.++||+++++++.||++|++.|+++|++|||+|+++++....+.+..         .++++..++...+...     ..
T Consensus         2 m~M~~il~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~~~~~~~~~~---------~G~~~~~~~~~~~~~~~~~~~~~   72 (402)
T 3ia7_A            2 MRQRHILFANVQGHGHVYPSLGLVSELARRGHRITYVTTPLFADEVKA---------AGAEVVLYKSEFDTFHVPEVVKQ   72 (402)
T ss_dssp             CCCCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHH---------TTCEEEECCCGGGTSSSSSSSCC
T ss_pred             CCCCEEEEEeCCCCcccccHHHHHHHHHhCCCEEEEEcCHHHHHHHHH---------cCCEEEecccccccccccccccc
Confidence            666799999999999999999999999999999999998776665544         4788888875332110     11


Q ss_pred             ccHHHHHHH-HHHhccHHHHHHHHHHhcCCCCCccEEEec-CCCccHHHHHHHhCCccEEEcc
Q 040291           76 NDFGKLFEK-VLQVMPGKLEELIEDINSREDEKLDCFIAD-GYMAWSMEVAKKMNVRGALFWP  136 (160)
Q Consensus        76 ~~~~~~~~~-~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D-~~~~~~~~~A~~lgiP~i~~~~  136 (160)
                      .+....+.. +.+.....+.++.+.+.+   .+||+||+| .+..++..+|+++|||++.+.+
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~  132 (402)
T 3ia7_A           73 EDAETQLHLVYVRENVAILRAAEEALGD---NPPDLVVYDVFPFIAGRLLAARWDRPAVRLTG  132 (402)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHHHHHTT---CCCSEEEEESTTHHHHHHHHHHHTCCEEEEES
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHhc---cCCCEEEECchHHHHHHHHHHhhCCCEEEEec
Confidence            222222222 222222334455555543   689999999 7778888899999999999864

>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5

Probab=99.72  E-value=1.8e-17  Score=129.55  Aligned_cols=122  Identities=14%  Similarity=0.161  Sum_probs=83.9

Q ss_pred             CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhHHhhhccCCCCCCCeeeeecCCCCCCC-CC-cccHHHH
Q 040291            4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIPDGMEPW-ED-RNDFGKL   81 (160)
Q Consensus         4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~-~~-~~~~~~~   81 (160)
                      +||+++++++.||++|++.|+++|++|||+|||+++....+.+.+         .+++++.++...... .. .......
T Consensus         1 M~Il~~~~~~~GHv~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~---------~g~~~~~i~~~~~~~~~~~~~~~~~~   71 (415)
T 1iir_A            1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLAE---------VGVPHVPVGPSARAPIQRAKPLTAED   71 (415)
T ss_dssp             CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH---------TTCCEEECCC-------CCSCCCHHH
T ss_pred             CeEEEEcCCCchhHHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHH---------cCCeeeeCCCCHHHHhhcccccchHH
Confidence            489999999999999999999999999999999999886655543         478998887543211 01 1111111


Q ss_pred             HHHHHHhccHHHHHHHHHHhcCCCCCccEEEecC-CCcc--HHHHHHHhCCccEEEccch
Q 040291           82 FEKVLQVMPGKLEELIEDINSREDEKLDCFIADG-YMAW--SMEVAKKMNVRGALFWPSS  138 (160)
Q Consensus        82 ~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~-~~~~--~~~~A~~lgiP~i~~~~~~  138 (160)
                      ...+   +.....+.++++.+.. .+|||||+|. +..|  +..+|+++|||++.+++++
T Consensus        72 ~~~~---~~~~~~~~~~~l~~~~-~~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~  127 (415)
T 1iir_A           72 VRRF---TTEAIATQFDEIPAAA-EGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCP  127 (415)
T ss_dssp             HHHH---HHHHHHHHHHHHHHHT-TTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSG
T ss_pred             HHHH---HHHHHHHHHHHHHHHh-cCCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCC
Confidence            1111   1112233344433111 5899999998 6678  8899999999999998766

>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}

Probab=99.72  E-value=7.5e-17  Score=126.13  Aligned_cols=126  Identities=21%  Similarity=0.207  Sum_probs=88.2

Q ss_pred             CCCCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhHHhhhccCCCCCCCeeeeecCCCCCCCC-C----c
Q 040291            1 MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIPDGMEPWE-D----R   75 (160)
Q Consensus         1 m~~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~-~----~   75 (160)
                      |.++||++++.++.||++|++.|+++|++|||+|+++++....+.+.+         .+++++.++...+... .    .
T Consensus         5 m~m~kIl~~~~~~~Gh~~p~~~la~~L~~~G~~V~~~~~~~~~~~~~~---------~g~~~~~~~~~~~~~~~~~~~~~   75 (430)
T 2iyf_A            5 TTPAHIAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPVFADKVAA---------TGPRPVLYHSTLPGPDADPEAWG   75 (430)
T ss_dssp             ---CEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHT---------TSCEEEECCCCSCCTTSCGGGGC
T ss_pred             cccceEEEEeCCCCccccchHHHHHHHHHCCCeEEEEeCHHHHHHHHh---------CCCEEEEcCCcCccccccccccc
Confidence            445799999999999999999999999999999999999876554433         4788888876433221 1    1


Q ss_pred             ccHHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEecCCCccHHHHHHHhCCccEEEccch
Q 040291           76 NDFGKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAWSMEVAKKMNVRGALFWPSS  138 (160)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~~~  138 (160)
                      .+....+..+...+...+.++.+.+++   .+||+||+|.+..++..+|+++|||++.+++.+
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~  135 (430)
T 2iyf_A           76 STLLDNVEPFLNDAIQALPQLADAYAD---DIPDLVLHDITSYPARVLARRWGVPAVSLSPNL  135 (430)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHHHHHTT---SCCSEEEEETTCHHHHHHHHHHTCCEEEEESSC
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHhhc---cCCCEEEECCccHHHHHHHHHcCCCEEEEeccc
Confidence            222222222222222234444444433   689999999987788899999999999988654

>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*

Probab=99.68  E-value=1.7e-16  Score=123.53  Aligned_cols=123  Identities=15%  Similarity=0.197  Sum_probs=87.7

Q ss_pred             CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhHHhhhccCCCCCCCeeeeecCCCCCCCCC-----ccc
Q 040291            3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIPDGMEPWED-----RND   77 (160)
Q Consensus         3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~-----~~~   77 (160)
                      ++||+++++++.||++|++.|+++|++|||+|+++++....+.+.+         .++++..++...+....     ..+
T Consensus        20 m~rIl~~~~~~~GHv~p~l~La~~L~~~Gh~V~v~~~~~~~~~~~~---------~G~~~~~~~~~~~~~~~~~~~~~~~   90 (415)
T 3rsc_A           20 MAHLLIVNVASHGLILPTLTVVTELVRRGHRVSYVTAGGFAEPVRA---------AGATVVPYQSEIIDADAAEVFGSDD   90 (415)
T ss_dssp             CCEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHH---------TTCEEEECCCSTTTCCHHHHHHSSS
T ss_pred             CCEEEEEeCCCccccccHHHHHHHHHHCCCEEEEEeCHHHHHHHHh---------cCCEEEeccccccccccchhhcccc
Confidence            4799999999999999999999999999999999998877766654         57999888754432210     001


Q ss_pred             HHHHHHH-HHHhccHHHHHHHHHHhcCCCCCccEEEec-CCCccHHHHHHHhCCccEEEccc
Q 040291           78 FGKLFEK-VLQVMPGKLEELIEDINSREDEKLDCFIAD-GYMAWSMEVAKKMNVRGALFWPS  137 (160)
Q Consensus        78 ~~~~~~~-~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D-~~~~~~~~~A~~lgiP~i~~~~~  137 (160)
                      ....+.. +.+.....+.++.+.+.+   .+||+||+| ....++..+|+++|||++.+.+.
T Consensus        91 ~~~~~~~~~~~~~~~~~~~l~~~l~~---~~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~  149 (415)
T 3rsc_A           91 LGVRPHLMYLRENVSVLRATAEALDG---DVPDLVLYDDFPFIAGQLLAARWRRPAVRLSAA  149 (415)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHHSS---SCCSEEEEESTTHHHHHHHHHHTTCCEEEEESS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhc---cCCCEEEECchhhhHHHHHHHHhCCCEEEEEec
Confidence            1111111 222222234444444443   689999999 77788888999999999998743

>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5

Probab=99.65  E-value=3.3e-16  Score=122.33  Aligned_cols=122  Identities=16%  Similarity=0.098  Sum_probs=82.9

Q ss_pred             CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhHHhhhccCCCCCCCeeeeecCCCCCCC-CC--cccHHH
Q 040291            4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIPDGMEPW-ED--RNDFGK   80 (160)
Q Consensus         4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~-~~--~~~~~~   80 (160)
                      +||++++.++.||++|++.|+++|++|||+|||++++...+.+..         .+++++.++...... ..  ......
T Consensus         1 MrIl~~~~~~~GH~~p~l~la~~L~~~Gh~V~~~~~~~~~~~v~~---------~g~~~~~~~~~~~~~~~~~~~~~~~~   71 (416)
T 1rrv_A            1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLAE---------VGVPHVPVGLPQHMMLQEGMPPPPPE   71 (416)
T ss_dssp             CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH---------HTCCEEECSCCGGGCCCTTSCCCCHH
T ss_pred             CeEEEEecCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHH---------cCCeeeecCCCHHHHHhhccccchhH
Confidence            489999999999999999999999999999999999876655544         478888887542111 00  011111


Q ss_pred             HHHHHHHhccHHHHHHHHHHhcCCCCCccEEEecCC-Ccc--HHHHHHHhCCccEEEccch
Q 040291           81 LFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGY-MAW--SMEVAKKMNVRGALFWPSS  138 (160)
Q Consensus        81 ~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~-~~~--~~~~A~~lgiP~i~~~~~~  138 (160)
                      ....+.   .....++++.+.+.. .+|||||+|.+ ..+  +..+|+++|||++.+++++
T Consensus        72 ~~~~~~---~~~~~~~~~~l~~~~-~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~  128 (416)
T 1rrv_A           72 EEQRLA---AMTVEMQFDAVPGAA-EGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSP  128 (416)
T ss_dssp             HHHHHH---HHHHHHHHHHHHHHT-TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSG
T ss_pred             HHHHHH---HHHHHHHHHHHHHHh-cCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCC
Confidence            111111   112233344433111 58999999974 456  7889999999999987665

>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}

Probab=99.64  E-value=1e-15  Score=120.45  Aligned_cols=125  Identities=13%  Similarity=0.113  Sum_probs=88.4

Q ss_pred             CCCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhHHhhhccCCCCCCCeeeeecCCCCCC-C-C------
Q 040291            2 NRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIPDGMEP-W-E------   73 (160)
Q Consensus         2 ~~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~-~-~------   73 (160)
                      ..+||++++.++.||++|++.|+++|++|||+|+|++++...+.+..         .|++++.++..... . .      
T Consensus        19 ~~mrIl~~~~~~~GHv~p~l~la~~L~~~GheV~~~~~~~~~~~v~~---------~G~~~~~i~~~~~~~~~~~~~~~~   89 (441)
T 2yjn_A           19 SHMRVVFSSMASKSHLFGLVPLAWAFRAAGHEVRVVASPALTEDITA---------AGLTAVPVGTDVDLVDFMTHAGHD   89 (441)
T ss_dssp             CCCEEEEECCSCHHHHTTTHHHHHHHHHTTCEEEEEECGGGHHHHHT---------TTCCEEECSCCCCHHHHHHHTTHH
T ss_pred             CccEEEEEcCCCcchHhHHHHHHHHHHHCCCeEEEEeCchhHHHHHh---------CCCceeecCCccchHHHhhhhhcc
Confidence            35799999999999999999999999999999999999876655543         57899888754210 0 0      


Q ss_pred             --------C-----cc--cHH---HHHHHHHHh----c-cH-HHHHHHHHHhcCCCCCccEEEecCCCccHHHHHHHhCC
Q 040291           74 --------D-----RN--DFG---KLFEKVLQV----M-PG-KLEELIEDINSREDEKLDCFIADGYMAWSMEVAKKMNV  129 (160)
Q Consensus        74 --------~-----~~--~~~---~~~~~~~~~----~-~~-~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~~A~~lgi  129 (160)
                              +     ..  ...   .....+.+.    + .. .+.++++.+++   .+||+||+|.+..++..+|+++||
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~pDlVv~d~~~~~~~~aA~~lgi  166 (441)
T 2yjn_A           90 IIDYVRSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRK---WRPDLVIWEPLTFAAPIAAAVTGT  166 (441)
T ss_dssp             HHHHHTTCCCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHH---HCCSEEEECTTCTHHHHHHHHHTC
T ss_pred             cccccccccccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHh---cCCCEEEecCcchhHHHHHHHcCC
Confidence                    0     10  111   111112111    1 12 56666655543   589999999988888999999999


Q ss_pred             ccEEEccch
Q 040291          130 RGALFWPSS  138 (160)
Q Consensus       130 P~i~~~~~~  138 (160)
                      |++.+...+
T Consensus       167 P~v~~~~~~  175 (441)
T 2yjn_A          167 PHARLLWGP  175 (441)
T ss_dssp             CEEEECSSC
T ss_pred             CEEEEecCC
Confidence            999986654

>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*

Probab=99.59  E-value=1.4e-14  Score=112.29  Aligned_cols=119  Identities=16%  Similarity=0.232  Sum_probs=83.5

Q ss_pred             CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhHHhhhccCCCCCCCeeeeecCCCCC------------
Q 040291            3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIPDGME------------   70 (160)
Q Consensus         3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~------------   70 (160)
                      .+||++++.++.||++|++.|+++|.+|||+|+++++ ...+.+..         .++++..++.+..            
T Consensus        20 ~MrIl~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~-~~~~~~~~---------~G~~~~~~~~~~~~~~~~~~~~~~~   89 (398)
T 3oti_A           20 HMRVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVA-EHADRAAA---------AGLEVVDVAPDYSAVKVFEQVAKDN   89 (398)
T ss_dssp             CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEES-SCHHHHHT---------TTCEEEESSTTCCHHHHHHHHHHHC
T ss_pred             cCEEEEEcCCCcchHhHHHHHHHHHHHCCCEEEEecc-chHHHHHh---------CCCeeEecCCccCHHHHhhhcccCC
Confidence            4799999999999999999999999999999999999 66655543         5888888874311            


Q ss_pred             ----------CCCCcccHHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEecCCCccHHHHHHHhCCccEEEccc
Q 040291           71 ----------PWEDRNDFGKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAWSMEVAKKMNVRGALFWPS  137 (160)
Q Consensus        71 ----------~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~~  137 (160)
                                ...........+......   .+.++.+.+++   .+||+||+|....++..+|+++|||++.....
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~l~~---~~pDlVv~d~~~~~~~~aA~~~giP~v~~~~~  160 (398)
T 3oti_A           90 PRFAETVATRPAIDLEEWGVQIAAVNRP---LVDGTMALVDD---YRPDLVVYEQGATVGLLAADRAGVPAVQRNQS  160 (398)
T ss_dssp             HHHHHTGGGSCCCSGGGGHHHHHHHHGG---GHHHHHHHHHH---HCCSEEEEETTCHHHHHHHHHHTCCEEEECCT
T ss_pred             ccccccccCChhhhHHHHHHHHHHHHHH---HHHHHHHHHHH---cCCCEEEECchhhHHHHHHHHcCCCEEEEecc
Confidence                      000011111222222222   23333333332   58999999988888888999999999987654

>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}

Probab=99.59  E-value=2e-14  Score=110.85  Aligned_cols=123  Identities=11%  Similarity=0.035  Sum_probs=83.7

Q ss_pred             CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhHHhhhccCCCCCCCeeeeecCCCCC-C-----------
Q 040291            4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIPDGME-P-----------   71 (160)
Q Consensus         4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~-~-----------   71 (160)
                      +||++++.++.||++|++.|+++|++|||+|+++++....+.+..         .++++..++.... .           
T Consensus         1 MrIl~~~~~~~Gh~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~---------~g~~~~~~~~~~~~~~~~~~~~~~~~   71 (384)
T 2p6p_A            1 MRILFVAAGSPATVFALAPLATAARNAGHQVVMAANQDMGPVVTG---------VGLPAVATTDLPIRHFITTDREGRPE   71 (384)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH---------TTCCEEESCSSCHHHHHHBCTTSCBC
T ss_pred             CEEEEEeCCccchHhHHHHHHHHHHHCCCEEEEEeCHHHHHHHHh---------CCCEEEEeCCcchHHHHhhhcccCcc
Confidence            489999999999999999999999999999999998876544433         4788877764320 0           


Q ss_pred             CCCcc-cHHHHH-HH-HHHhccHHHHHHHHHHhcCCCCCccEEEecCCCccHHHHHHHhCCccEEEccch
Q 040291           72 WEDRN-DFGKLF-EK-VLQVMPGKLEELIEDINSREDEKLDCFIADGYMAWSMEVAKKMNVRGALFWPSS  138 (160)
Q Consensus        72 ~~~~~-~~~~~~-~~-~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~~~  138 (160)
                      ..... .....+ .. +.......+.++.+.+++   .+||+||+|.+..++..+|+++|||++.++..+
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~  138 (384)
T 2p6p_A           72 AIPSDPVAQARFTGRWFARMAASSLPRMLDFSRA---WRPDLIVGGTMSYVAPLLALHLGVPHARQTWDA  138 (384)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HCCSEEEEETTCTHHHHHHHHHTCCEEEECCSS
T ss_pred             ccCcchHHHHHHHHHHHHhhHHHHHHHHHHHHhc---cCCcEEEECcchhhHHHHHHhcCCCEEEeccCC
Confidence            00010 111111 11 111222234444444433   589999999988888889999999999987543

>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*

Probab=99.55  E-value=5.7e-15  Score=115.11  Aligned_cols=122  Identities=16%  Similarity=0.149  Sum_probs=81.6

Q ss_pred             CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhHHhhhccCCCCCCCeeeeecCCCCCCCC--CcccHHHH
Q 040291            4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIPDGMEPWE--DRNDFGKL   81 (160)
Q Consensus         4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~--~~~~~~~~   81 (160)
                      +||++++.++.||++|++.|+++|.+|||+|+|+++....+.+++         .++++..++.......  ........
T Consensus         1 MrIli~~~gt~Ghv~p~~~La~~L~~~Gh~V~v~~~~~~~~~v~~---------~g~~~~~l~~~~~~~~~~~~~~~~~~   71 (404)
T 3h4t_A            1 MGVLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCAE---------VGVPMVPVGRAVRAGAREPGELPPGA   71 (404)
T ss_dssp             -CEEEEEESSHHHHHHHHHHHHHHHHTTCCEEEEECGGGHHHHHH---------TTCCEEECSSCSSGGGSCTTCCCTTC
T ss_pred             CeEEEEeCCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHH---------cCCceeecCCCHHHHhccccCCHHHH
Confidence            589999999999999999999999999999999999887766654         4788888864322110  00000000


Q ss_pred             HHHHHHhccHHHHHHHHHHhcCCCCCccEEEecCCCccH---HHHHHHhCCccEEEccchH
Q 040291           82 FEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAWS---MEVAKKMNVRGALFWPSSA  139 (160)
Q Consensus        82 ~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~---~~~A~~lgiP~i~~~~~~~  139 (160)
                      ...+.......++++.+.+     .++|+||+|....++   ..+|+++|||++.+..++.
T Consensus        72 ~~~~~~~~~~~~~~l~~~~-----~~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~  127 (404)
T 3h4t_A           72 AEVVTEVVAEWFDKVPAAI-----EGCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPD  127 (404)
T ss_dssp             GGGHHHHHHHHHHHHHHHH-----TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGG
T ss_pred             HHHHHHHHHHHHHHHHHHh-----cCCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCc
Confidence            1111112222233333322     368999998765544   6789999999998877654

>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*

Probab=99.54  E-value=2.1e-14  Score=111.30  Aligned_cols=123  Identities=13%  Similarity=0.115  Sum_probs=83.7

Q ss_pred             CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhHHhhhccCCCCCCCeeeeecCCCCC---------CCC
Q 040291            3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIPDGME---------PWE   73 (160)
Q Consensus         3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~---------~~~   73 (160)
                      ++||++++.++.||++|++.|+++|.+|||+|++++++...+.+..         .++++..++....         ...
T Consensus        15 ~MrIl~~~~~~~gh~~~~~~La~~L~~~GheV~v~~~~~~~~~~~~---------~G~~~~~~~~~~~~~~~~~~~~~~~   85 (398)
T 4fzr_A           15 HMRILVIAGCSEGFVMPLVPLSWALRAAGHEVLVAASENMGPTVTG---------AGLPFAPTCPSLDMPEVLSWDREGN   85 (398)
T ss_dssp             CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEEEGGGHHHHHH---------TTCCEEEEESSCCHHHHHSBCTTSC
T ss_pred             ceEEEEEcCCCcchHHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHh---------CCCeeEecCCccchHhhhhhhccCc
Confidence            5899999999999999999999999999999999998776665544         4677777653110         000


Q ss_pred             ------Cccc-HHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEecCCCccHHHHHHHhCCccEEEccc
Q 040291           74 ------DRND-FGKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAWSMEVAKKMNVRGALFWPS  137 (160)
Q Consensus        74 ------~~~~-~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~~  137 (160)
                            .... .......+.......+.++.+.+++   .+||+||+|....++..+|+++|||++.+...
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~pDlVv~d~~~~~~~~~a~~~giP~v~~~~~  153 (398)
T 4fzr_A           86 RTTMPREEKPLLEHIGRGYGRLVLRMRDEALALAER---WKPDLVLTETYSLTGPLVAATLGIPWIEQSIR  153 (398)
T ss_dssp             BCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HCCSEEEEETTCTHHHHHHHHHTCCEEEECCS
T ss_pred             ccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh---CCCCEEEECccccHHHHHHHhhCCCEEEeccC
Confidence                  0001 1111111112222223344433333   68999999987788888999999999987754

>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*

Probab=99.50  E-value=9.2e-14  Score=107.23  Aligned_cols=124  Identities=14%  Similarity=0.152  Sum_probs=80.5

Q ss_pred             CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhHHhhhccCCCCCCCeeeeec-CCCCC--C--------
Q 040291            3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSI-PDGME--P--------   71 (160)
Q Consensus         3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l-~~~~~--~--------   71 (160)
                      ++||++++.++.||++|++.|+++|.+|||+|+++++....+.+..         .++++..+ +....  .        
T Consensus         1 ~MrIl~~~~~~~gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~---------~g~~~~~~~~~~~~~~~~~~~~~~~   71 (391)
T 3tsa_A            1 HMRVLVVPLPYPTHLMAMVPLCWALQASGHEVLIAAPPELQATAHG---------AGLTTAGIRGNDRTGDTGGTTQLRF   71 (391)
T ss_dssp             CCEEEEECCSCHHHHHTTHHHHHHHHHTTCEEEEEECHHHHHHHHH---------BTCEEEEC--------------CCS
T ss_pred             CcEEEEEcCCCcchhhhHHHHHHHHHHCCCEEEEecChhhHHHHHh---------CCCceeeecCCccchhhhhhhcccc
Confidence            4799999999999999999999999999999999998765555543         46777776 32110  0        


Q ss_pred             CCC----c--ccHHHHHHHHHHhc----cHHHHHHHHHHhcCCCCCccEEEecCCCccHHHHHHHhCCccEEEccch
Q 040291           72 WED----R--NDFGKLFEKVLQVM----PGKLEELIEDINSREDEKLDCFIADGYMAWSMEVAKKMNVRGALFWPSS  138 (160)
Q Consensus        72 ~~~----~--~~~~~~~~~~~~~~----~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~~~  138 (160)
                      ...    .  ......+......+    ...+.++.+.+.+   .+||+||+|....++..+|+++|||++.+....
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~PD~Vv~~~~~~~~~~aa~~~giP~v~~~~~~  145 (391)
T 3tsa_A           72 PNPAFGQRDTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEA---WRPSVLLVDVCALIGRVLGGLLDLPVVLHRWGV  145 (391)
T ss_dssp             CCGGGGCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HCCSEEEEETTCHHHHHHHHHTTCCEEEECCSC
T ss_pred             cccccccccchhHHHHHHHHHHHHhhcchhhHHHHHHHHHh---cCCCEEEeCcchhHHHHHHHHhCCCEEEEecCC
Confidence            000    0  01111111111111    1113333333333   589999999877777889999999999985443

>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*

Probab=99.41  E-value=9e-13  Score=102.13  Aligned_cols=120  Identities=18%  Similarity=0.121  Sum_probs=80.7

Q ss_pred             CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhHHhhhccCCCCCCCeeeeecCCCC------------C
Q 040291            3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIPDGM------------E   70 (160)
Q Consensus         3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~------------~   70 (160)
                      ++||++++.++.||++|++.|+++|.++||+|+++++....+.+..         .++++..++.+.            .
T Consensus        20 ~MrIl~~~~~~~Gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~---------~g~~~~~~~~~~~~~~~~~~~~~~~   90 (412)
T 3otg_A           20 HMRVLFASLGTHGHTYPLLPLATAARAAGHEVTFATGEGFAGTLRK---------LGFEPVATGMPVFDGFLAALRIRFD   90 (412)
T ss_dssp             SCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHH---------TTCEEEECCCCHHHHHHHHHHHHHS
T ss_pred             eeEEEEEcCCCcccHHHHHHHHHHHHHCCCEEEEEccHHHHHHHHh---------cCCceeecCcccccchhhhhhhhhc
Confidence            5799999999999999999999999999999999999866444433         478888776310            0


Q ss_pred             C-CC---C----cccHHHHHHHH-HHhccHHHHHHHHHHhcCCCCCccEEEecCCCccHHHHHHHhCCccEEEccc
Q 040291           71 P-WE---D----RNDFGKLFEKV-LQVMPGKLEELIEDINSREDEKLDCFIADGYMAWSMEVAKKMNVRGALFWPS  137 (160)
Q Consensus        71 ~-~~---~----~~~~~~~~~~~-~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~~  137 (160)
                      . ..   .    .......+... .......+.+++++      .+||+||.|....++..+|+++|||++.....
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~------~~pDvVv~~~~~~~~~~aa~~~giP~v~~~~~  160 (412)
T 3otg_A           91 TDSPEGLTPEQLSELPQIVFGRVIPQRVFDELQPVIER------LRPDLVVQEISNYGAGLAALKAGIPTICHGVG  160 (412)
T ss_dssp             CSCCTTCCHHHHTTSHHHHHHTHHHHHHHHHHHHHHHH------HCCSEEEEETTCHHHHHHHHHHTCCEEEECCS
T ss_pred             ccCCccCChhHhhHHHHHHHhccchHHHHHHHHHHHHh------cCCCEEEECchhhHHHHHHHHcCCCEEEeccc
Confidence            0 00   0    00111111111 11111223334433      58999999987777788899999999987554

>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}

Probab=99.23  E-value=5.3e-11  Score=91.68  Aligned_cols=114  Identities=16%  Similarity=0.200  Sum_probs=70.4

Q ss_pred             CCCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChh-hHHhhhccCCCCCCCeeeeecCCC-CCCCCCc---c
Q 040291            2 NRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHK-RIMESLEGKNDLGEQIRLVSIPDG-MEPWEDR---N   76 (160)
Q Consensus         2 ~~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~-~~~~~~~~~~~~~~~i~~~~l~~~-~~~~~~~---~   76 (160)
                      =+.||++...+..||++|.+.||++|.+|||+|+|+++....+ .+.+.        .++++..++.. ++.....   .
T Consensus         1 M~~~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~~~g~e~~~v~~--------~g~~~~~i~~~~~~~~~~~~~~~   72 (365)
T 3s2u_A            1 MKGNVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVPK--------AGLPLHLIQVSGLRGKGLKSLVK   72 (365)
T ss_dssp             --CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTHHHHTGG--------GTCCEEECC--------------
T ss_pred             CCCcEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEECCchHhhchhhh--------cCCcEEEEECCCcCCCCHHHHHH
Confidence            0468998887777999999999999999999999998875432 22111        46777777632 2110000   1


Q ss_pred             cHHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEecCCCcc--HHHHHHHhCCccEEE
Q 040291           77 DFGKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAW--SMEVAKKMNVRGALF  134 (160)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~--~~~~A~~lgiP~i~~  134 (160)
                      ....++..+.     ....++++      .+||+||.+.....  +...|..+|||++..
T Consensus        73 ~~~~~~~~~~-----~~~~~l~~------~~PDvVi~~g~~~s~p~~laA~~~~iP~vih  121 (365)
T 3s2u_A           73 APLELLKSLF-----QALRVIRQ------LRPVCVLGLGGYVTGPGGLAARLNGVPLVIH  121 (365)
T ss_dssp             CHHHHHHHHH-----HHHHHHHH------HCCSEEEECSSSTHHHHHHHHHHTTCCEEEE
T ss_pred             HHHHHHHHHH-----HHHHHHHh------cCCCEEEEcCCcchHHHHHHHHHcCCCEEEE
Confidence            1112221111     12344554      58999998875543  345688899999974

>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*

Probab=98.68  E-value=1.9e-07  Score=70.82  Aligned_cols=117  Identities=17%  Similarity=0.181  Sum_probs=70.6

Q ss_pred             CCC--CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChh--hHHhhhccCCCCCCCeeeeecCCCCCCCCCcc
Q 040291            1 MNR--PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHK--RIMESLEGKNDLGEQIRLVSIPDGMEPWEDRN   76 (160)
Q Consensus         1 m~~--~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~--~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~   76 (160)
                      |.+  +||++++.+..||..+...|+++|+++||+|++++......  .+..         .++++..++......   .
T Consensus         2 M~~m~mkIl~~~~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~---------~g~~~~~~~~~~~~~---~   69 (364)
T 1f0k_A            2 MSGQGKRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPK---------HGIEIDFIRISGLRG---K   69 (364)
T ss_dssp             -----CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGGG---------GTCEEEECCCCCCTT---C
T ss_pred             CCCCCcEEEEEeCCCccchhHHHHHHHHHHHcCCEEEEEecCCcchhhhccc---------cCCceEEecCCccCc---C
Confidence            555  79999997777999999999999999999999999875422  1211         367776664321011   1


Q ss_pred             cHHHHHH---HHHHhccHHHHHHHHHHhcCCCCCccEEEecCCCc--cHHHHHHHhCCccEEEcc
Q 040291           77 DFGKLFE---KVLQVMPGKLEELIEDINSREDEKLDCFIADGYMA--WSMEVAKKMNVRGALFWP  136 (160)
Q Consensus        77 ~~~~~~~---~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~--~~~~~A~~lgiP~i~~~~  136 (160)
                      .....+.   ...... ..+.+++++      .+||+|+++....  .+..++...|+|++....
T Consensus        70 ~~~~~~~~~~~~~~~~-~~l~~~l~~------~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~  127 (364)
T 1f0k_A           70 GIKALIAAPLRIFNAW-RQARAIMKA------YKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQ  127 (364)
T ss_dssp             CHHHHHTCHHHHHHHH-HHHHHHHHH------HCCSEEEECSSTTHHHHHHHHHHTTCCEEEEEC
T ss_pred             ccHHHHHHHHHHHHHH-HHHHHHHHh------cCCCEEEEeCCcCchHHHHHHHHcCCCEEEEec
Confidence            1111110   000111 123334443      5899999886442  245677888999987543

>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*

Probab=97.43  E-value=0.0024  Score=48.94  Aligned_cols=133  Identities=17%  Similarity=0.133  Sum_probs=67.6

Q ss_pred             CCCeEEEEcCC-----CCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhHH---------hhhc--cCCCCCCCeeeeec
Q 040291            2 NRPHVLVLPIP-----AQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIM---------ESLE--GKNDLGEQIRLVSI   65 (160)
Q Consensus         2 ~~~~i~~~~~p-----~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~---------~~~~--~~~~~~~~i~~~~l   65 (160)
                      +++||++++.-     ..|--.-+..|+++|+++||+|+++++......-.         ....  .......++++..+
T Consensus         1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~   80 (439)
T 3fro_A            1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYRI   80 (439)
T ss_dssp             CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTCSCCEEEEEEEETTEEEEEEEEEEEETTEEEEEE
T ss_pred             CceEEEEEecccCCcccCCHHHHHHHHHHHHHHCCCeEEEEecCCCCchhhhhccccccCcccceeeeeccCCCceEEEe
Confidence            36899998832     34555678999999999999999999654321100         0000  00001135666555


Q ss_pred             CCCCCCCCC-cccHH-HHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEecCCCcc--HHHHHHHhCCccEEEcc
Q 040291           66 PDGMEPWED-RNDFG-KLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAW--SMEVAKKMNVRGALFWP  136 (160)
Q Consensus        66 ~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~--~~~~A~~lgiP~i~~~~  136 (160)
                      +...-.... ..... .+...+.... ..+..+++.+.... .+||+|.+......  +..++...|+|+|....
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~Dii~~~~~~~~~~~~~~~~~~~~~~v~~~h  153 (439)
T 3fro_A           81 GGGLLDSEDVYGPGWDGLIRKAVTFG-RASVLLLNDLLREE-PLPDVVHFHDWHTVFAGALIKKYFKIPAVFTIH  153 (439)
T ss_dssp             ESGGGGCSSTTCSHHHHHHHHHHHHH-HHHHHHHHHHTTTS-CCCSEEEEESGGGHHHHHHHHHHHCCCEEEEES
T ss_pred             cchhccccccccCCcchhhhhhHHHH-HHHHHHHHHHhccC-CCCeEEEecchhhhhhHHHHhhccCCCEEEEec
Confidence            431100000 01011 1112221111 12334444441111 58999997654332  34566788999988654

>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*

Probab=97.33  E-value=0.0017  Score=50.07  Aligned_cols=123  Identities=13%  Similarity=0.112  Sum_probs=66.3

Q ss_pred             CCeEEEEcC---C--------CCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhHHhhhccCCCCCCCeeeeecCCCCCC
Q 040291            3 RPHVLVLPI---P--------AQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIPDGMEP   71 (160)
Q Consensus         3 ~~~i~~~~~---p--------~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~   71 (160)
                      .+||+++..   |        ..|+-.....++++|.++||+|++++...........     ....++++..++.....
T Consensus        20 mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~-----~~~~~v~v~~~~~~~~~   94 (438)
T 3c48_A           20 HMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQGEIV-----RVAENLRVINIAAGPYE   94 (438)
T ss_dssp             CCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGCSEE-----EEETTEEEEEECCSCSS
T ss_pred             hheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCCCCCcccc-----cccCCeEEEEecCCCcc
Confidence            579999984   2        3578889999999999999999999876432110000     00146777666532111


Q ss_pred             CCCcccHHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEecCCCc--cHHHHHHHhCCccEEEccch
Q 040291           72 WEDRNDFGKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMA--WSMEVAKKMNVRGALFWPSS  138 (160)
Q Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~--~~~~~A~~lgiP~i~~~~~~  138 (160)
                      ..........+..+...   .++..++.   .  .+||+|++.....  .+..++..+|+|+|......
T Consensus        95 ~~~~~~~~~~~~~~~~~---~~~~~~~~---~--~~~Div~~~~~~~~~~~~~~~~~~~~p~v~~~h~~  155 (438)
T 3c48_A           95 GLSKEELPTQLAAFTGG---MLSFTRRE---K--VTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTL  155 (438)
T ss_dssp             SCCGGGGGGGHHHHHHH---HHHHHHHH---T--CCCSEEEEEHHHHHHHHHHHHHHHTCCEEEECSSC
T ss_pred             ccchhHHHHHHHHHHHH---HHHHHHhc---c--CCCCEEEeCCccHHHHHHHHHHHcCCCEEEEecCC
Confidence            10111111111111111   11111222   1  2499998764322  23446778899998865544

>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*

Probab=97.25  E-value=0.00054  Score=51.28  Aligned_cols=42  Identities=19%  Similarity=0.214  Sum_probs=33.4

Q ss_pred             CCCCeEEEEcCC----------------CCCChHHHHHHHHHHHhCCCEEEEEeCCCC
Q 040291            1 MNRPHVLVLPIP----------------AQGHVIPLLEFSQCLAKQGFRVTFVNTDYD   42 (160)
Q Consensus         1 m~~~~i~~~~~p----------------~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~   42 (160)
                      |+++||+++...                ..|.-.-...++++|.++||+|++++....
T Consensus         1 M~~mkIl~v~~~~~~~~~~~~~p~~p~~~gG~~~~~~~l~~~L~~~G~~v~v~~~~~~   58 (342)
T 2iuy_A            1 MRPLKVALVNIPLRVPGSDAWISVPPQGYGGIQWVVANLMDGLLELGHEVFLLGAPGS   58 (342)
T ss_dssp             --CCEEEEECCCCBCTTSSSBCCSSCSSSCHHHHHHHHHHHHHHHTTCEEEEESCTTS
T ss_pred             CCccEEEEEeccccccCcccccccCcccCChHHHHHHHHHHHHHHcCCeEEEEecCCC
Confidence            888999998855                256667889999999999999999987643

>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*

Probab=97.22  E-value=0.0025  Score=50.25  Aligned_cols=127  Identities=14%  Similarity=0.150  Sum_probs=67.7

Q ss_pred             CCeEEEEcCC---------------CCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhHHhhhccC-CC--CCCCeeeee
Q 040291            3 RPHVLVLPIP---------------AQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGK-ND--LGEQIRLVS   64 (160)
Q Consensus         3 ~~~i~~~~~p---------------~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~-~~--~~~~i~~~~   64 (160)
                      ++||+++..-               ..|.-.....++++|+++||+|++++......... .+... ..  ...++++..
T Consensus         7 ~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~-~~~~~~~~~~~~~gv~v~~   85 (499)
T 2r60_A            7 IKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMGVQVDIITRRIKDENWP-EFSGEIDYYQETNKVRIVR   85 (499)
T ss_dssp             CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTTCEEEEEEECCCBTTBG-GGCCSEEECTTCSSEEEEE
T ss_pred             cceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhcCCeEEEEeCCCCccccc-chhhhHHhccCCCCeEEEE
Confidence            3799998842               35667889999999999999999998754321100 00000 00  024777777


Q ss_pred             cCCCCCCCCCcccHHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEecCCCc--cHHHHHHHhCCccEEEccch
Q 040291           65 IPDGMEPWEDRNDFGKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMA--WSMEVAKKMNVRGALFWPSS  138 (160)
Q Consensus        65 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~--~~~~~A~~lgiP~i~~~~~~  138 (160)
                      ++..................+.    ..+..++++.   . .++|+|.+.....  .+..++..+|+|+|......
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~----~~l~~~l~~~---~-~~~Divh~~~~~~~~~~~~~~~~~~~p~v~~~H~~  153 (499)
T 2r60_A           86 IPFGGDKFLPKEELWPYLHEYV----NKIINFYREE---G-KFPQVVTTHYGDGGLAGVLLKNIKGLPFTFTGHSL  153 (499)
T ss_dssp             ECCSCSSCCCGGGCGGGHHHHH----HHHHHHHHHH---T-CCCSEEEEEHHHHHHHHHHHHHHHCCCEEEECSSC
T ss_pred             ecCCCcCCcCHHHHHHHHHHHH----HHHHHHHHhc---C-CCCCEEEEcCCcchHHHHHHHHhcCCcEEEEccCc
Confidence            6632111101111111111111    1223334331   0 3799998654322  13446778899998765543

>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*

Probab=97.07  E-value=0.0032  Score=47.63  Aligned_cols=107  Identities=11%  Similarity=0.110  Sum_probs=64.2

Q ss_pred             CCCCeEEEEcC--C--CCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhHHhhhccCCCCCCCeeeeecCCCCCCCCCcc
Q 040291            1 MNRPHVLVLPI--P--AQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIPDGMEPWEDRN   76 (160)
Q Consensus         1 m~~~~i~~~~~--p--~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~   76 (160)
                      |+++||++++.  +  ..|.-.-+..++++|  +||+|++++.......... ..    ...++.+..++.....    .
T Consensus         2 ~~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~~----~   70 (394)
T 3okp_A            2 SASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHA-YD----KTLDYEVIRWPRSVML----P   70 (394)
T ss_dssp             --CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHH-HH----TTCSSEEEEESSSSCC----S
T ss_pred             CCCceEEEEeCccCCccchHHHHHHHHHHHh--cCCeEEEEECCCCccchhh-hc----cccceEEEEccccccc----c
Confidence            56789999874  3  457778899999999  7999999998766431111 10    1246666665532110    0


Q ss_pred             cHHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEecCCCc--cHHHHHHHhCCccEE
Q 040291           77 DFGKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMA--WSMEVAKKMNVRGAL  133 (160)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~--~~~~~A~~lgiP~i~  133 (160)
                      .. ..        ...+.+++++      .++|+|+......  +...++.++|+|.++
T Consensus        71 ~~-~~--------~~~l~~~~~~------~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i  114 (394)
T 3okp_A           71 TP-TT--------AHAMAEIIRE------REIDNVWFGAAAPLALMAGTAKQAGASKVI  114 (394)
T ss_dssp             CH-HH--------HHHHHHHHHH------TTCSEEEESSCTTGGGGHHHHHHTTCSEEE
T ss_pred             ch-hh--------HHHHHHHHHh------cCCCEEEECCcchHHHHHHHHHhcCCCcEE
Confidence            11 00        0123445554      5899999755443  346678999998444

>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3

Probab=96.38  E-value=0.048  Score=41.06  Aligned_cols=112  Identities=10%  Similarity=0.060  Sum_probs=58.5

Q ss_pred             CeEEEEcCCCCCChHHHHHHHHHHHhC-CCEEEEEeCCCChhhHHhhhccCCCCCCCeee-eecCCCCCCCCCcccHHHH
Q 040291            4 PHVLVLPIPAQGHVIPLLEFSQCLAKQ-GFRVTFVNTDYDHKRIMESLEGKNDLGEQIRL-VSIPDGMEPWEDRNDFGKL   81 (160)
Q Consensus         4 ~~i~~~~~p~~GH~~P~l~la~~L~~r-Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~l~~~~~~~~~~~~~~~~   81 (160)
                      +||+++... .+.......++++|.++ ||+|.++.+............     ..++.+ ..++..  .  ........
T Consensus         6 mkIl~v~~~-~~~~~~~~~l~~~L~~~~g~~v~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~--~--~~~~~~~~   75 (376)
T 1v4v_A            6 KRVVLAFGT-RPEATKMAPVYLALRGIPGLKPLVLLTGQHREQLRQALS-----LFGIQEDRNLDVM--Q--ERQALPDL   75 (376)
T ss_dssp             EEEEEEECS-HHHHHHHHHHHHHHHTSTTEEEEEEECSSCHHHHHHHHH-----TTTCCCSEECCCC--S--SCCCHHHH
T ss_pred             eEEEEEEec-cHHHHHHHHHHHHHHhCCCCceEEEEcCCcHHHHHHHHH-----HcCCCcccccccC--C--CCccHHHH
Confidence            689888743 33345567889999998 899888776543322111110     013322 122211  1  11112111


Q ss_pred             HHHHHHhccHHHHHHHHHHhcCCCCCccEEEe--cCCCcc-HHHHHHHhCCccEEEc
Q 040291           82 FEKVLQVMPGKLEELIEDINSREDEKLDCFIA--DGYMAW-SMEVAKKMNVRGALFW  135 (160)
Q Consensus        82 ~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~--D~~~~~-~~~~A~~lgiP~i~~~  135 (160)
                      ....   . ..+.+++++      .+||+|+.  +....+ +..+|..+|||++...
T Consensus        76 ~~~~---~-~~l~~~l~~------~~pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~~  122 (376)
T 1v4v_A           76 AARI---L-PQAARALKE------MGADYVLVHGDTLTTFAVAWAAFLEGIPVGHVE  122 (376)
T ss_dssp             HHHH---H-HHHHHHHHH------TTCSEEEEESSCHHHHHHHHHHHHTTCCEEEET
T ss_pred             HHHH---H-HHHHHHHHH------cCCCEEEEeCChHHHHHHHHHHHHhCCCEEEEe
Confidence            1111   1 124445554      68999997  322333 3567888999988654

>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*

Probab=96.25  E-value=0.048  Score=41.31  Aligned_cols=113  Identities=15%  Similarity=0.212  Sum_probs=60.8

Q ss_pred             CCeEEEEcCCCC-CChHHHHHHHHHHHhCCCEEEEEeCCCChhhHHhhhccCCCCCCCeeeeecCCC-CCCCCCcccHHH
Q 040291            3 RPHVLVLPIPAQ-GHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIPDG-MEPWEDRNDFGK   80 (160)
Q Consensus         3 ~~~i~~~~~p~~-GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~-~~~~~~~~~~~~   80 (160)
                      ++++....+|.. |.-.-...|+++|+++||+|++++...... ...       ...++.+..++.. .+.. . .....
T Consensus        15 ~~~~~~~~~p~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~-~~~-------~~~~i~~~~~~~~~~~~~-~-~~~~~   84 (394)
T 2jjm_A           15 KLKIGITCYPSVGGSGVVGTELGKQLAERGHEIHFITSGLPFR-LNK-------VYPNIYFHEVTVNQYSVF-Q-YPPYD   84 (394)
T ss_dssp             CCEEEEECCC--CHHHHHHHHHHHHHHHTTCEEEEECSSCC-----C-------CCTTEEEECCCCC----C-C-SCCHH
T ss_pred             eeeeehhcCCCCCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCc-ccc-------cCCceEEEeccccccccc-c-ccccc
Confidence            456777777654 566788899999999999999998854321 111       1246666554321 0000 0 00111


Q ss_pred             HHHHHHHhccHHHHHHHHHHhcCCCCCccEEEecCCCcc--HHHHHHHh---CCccEEEccc
Q 040291           81 LFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAW--SMEVAKKM---NVRGALFWPS  137 (160)
Q Consensus        81 ~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~--~~~~A~~l---giP~i~~~~~  137 (160)
                      + . .    ...+.+++++      .+||+|+.......  ...++.++   ++|++.....
T Consensus        85 ~-~-~----~~~l~~~l~~------~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~  134 (394)
T 2jjm_A           85 L-A-L----ASKMAEVAQR------ENLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHG  134 (394)
T ss_dssp             H-H-H----HHHHHHHHHH------HTCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCH
T ss_pred             H-H-H----HHHHHHHHHH------cCCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEec
Confidence            0 0 0    1123344444      47999997654332  33445544   5998876554

>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*

Probab=96.22  E-value=0.033  Score=42.14  Aligned_cols=41  Identities=15%  Similarity=0.216  Sum_probs=32.3

Q ss_pred             CCeEEEEcC---CC-CCChHHHHHHHHHHHhCCCEEEEEeCCCCh
Q 040291            3 RPHVLVLPI---PA-QGHVIPLLEFSQCLAKQGFRVTFVNTDYDH   43 (160)
Q Consensus         3 ~~~i~~~~~---p~-~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~   43 (160)
                      ++||+++..   +. .|.-.-...++++|.++||+|++++.....
T Consensus        20 ~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~   64 (406)
T 2gek_A           20 HMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGHEVSVLAPASPH   64 (406)
T ss_dssp             -CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTTCEEEEEESCCTT
T ss_pred             cceEEEEeccCCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCcc
Confidence            578998873   22 466688999999999999999999987543

>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}

Probab=96.18  E-value=0.024  Score=43.76  Aligned_cols=115  Identities=11%  Similarity=0.095  Sum_probs=61.4

Q ss_pred             CCCCeEEEEcCCCCCChHHHHHHHHHHHhC-CCEEEEEeCCCChhhHHhhhccCCCCCCCeee-eecCCCCCCCCCcccH
Q 040291            1 MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQ-GFRVTFVNTDYDHKRIMESLEGKNDLGEQIRL-VSIPDGMEPWEDRNDF   78 (160)
Q Consensus         1 m~~~~i~~~~~p~~GH~~P~l~la~~L~~r-Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~l~~~~~~~~~~~~~   78 (160)
                      |++++|+++. +......=+.+|.++|.++ |+++.++.+....+.......     .-+++. ..+.  ....  ....
T Consensus        23 ~~m~ki~~v~-Gtr~~~~~~a~li~~l~~~~~~~~~~~~tG~h~~~~~~~~~-----~~~i~~~~~l~--~~~~--~~~~   92 (396)
T 3dzc_A           23 NAMKKVLIVF-GTRPEAIKMAPLVQQLCQDNRFVAKVCVTGQHREMLDQVLE-----LFSITPDFDLN--IMEP--GQTL   92 (396)
T ss_dssp             -CCEEEEEEE-CSHHHHHHHHHHHHHHHHCTTEEEEEEECCSSSHHHHHHHH-----HTTCCCSEECC--CCCT--TCCH
T ss_pred             CCCCeEEEEE-eccHhHHHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHH-----hcCCCCceeee--cCCC--CCCH
Confidence            4556888777 6666778889999999987 799987666544321111000     012210 0111  1000  1122


Q ss_pred             HHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEe-c-CCCccH-HHHHHHhCCccEEEc
Q 040291           79 GKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIA-D-GYMAWS-MEVAKKMNVRGALFW  135 (160)
Q Consensus        79 ~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~-D-~~~~~~-~~~A~~lgiP~i~~~  135 (160)
                      ...   +...+ ..+.+++++      .+||+|+. + ....++ ...|.++|||.+.+.
T Consensus        93 ~~~---~~~~~-~~l~~~l~~------~kPDvVi~~g~~~~~~~~~~aa~~~~IPv~h~~  142 (396)
T 3dzc_A           93 NGV---TSKIL-LGMQQVLSS------EQPDVVLVHGDTATTFAASLAAYYQQIPVGHVE  142 (396)
T ss_dssp             HHH---HHHHH-HHHHHHHHH------HCCSEEEEETTSHHHHHHHHHHHTTTCCEEEET
T ss_pred             HHH---HHHHH-HHHHHHHHh------cCCCEEEEECCchhHHHHHHHHHHhCCCEEEEE
Confidence            111   11111 235556655      58999884 3 333343 567889999988764

>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}

Probab=96.15  E-value=0.018  Score=44.64  Aligned_cols=112  Identities=15%  Similarity=0.186  Sum_probs=59.7

Q ss_pred             CCCCeEEEEcCCCCCChHHHHHHHHHHHhC--CCEEEEEeCCCCh---hhHHhhhccCCCCCCCeee-eecCCCCCCCCC
Q 040291            1 MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQ--GFRVTFVNTDYDH---KRIMESLEGKNDLGEQIRL-VSIPDGMEPWED   74 (160)
Q Consensus         1 m~~~~i~~~~~p~~GH~~P~l~la~~L~~r--Gh~Vt~~~~~~~~---~~~~~~~~~~~~~~~~i~~-~~l~~~~~~~~~   74 (160)
                      |++++|+++. +....+.=+.+|.++|.++  |+++.++.+....   +.....        -+++. ..+.  ...  .
T Consensus        25 m~~~kI~~v~-Gtr~~~~~~a~li~~l~~~~~~~~~~~~~tG~h~~m~~~~~~~--------~~i~~~~~l~--v~~--~   91 (403)
T 3ot5_A           25 MAKIKVMSIF-GTRPEAIKMAPLVLALEKEPETFESTVVITAQHREMLDQVLEI--------FDIKPDIDLD--IMK--K   91 (403)
T ss_dssp             -CCEEEEEEE-CSHHHHHHHHHHHHHHHTCTTTEEEEEEECC-----CHHHHHH--------TTCCCSEECC--CCC---
T ss_pred             cccceEEEEE-ecChhHHHHHHHHHHHHhCCCCCcEEEEEecCcHHHHHHHHHh--------cCCCCCcccc--cCC--C
Confidence            5556888887 5555677778999999988  6898876665331   111111        12210 1111  100  0


Q ss_pred             cccHHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEe-cC-CCcc-HHHHHHHhCCccEEEc
Q 040291           75 RNDFGKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIA-DG-YMAW-SMEVAKKMNVRGALFW  135 (160)
Q Consensus        75 ~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~-D~-~~~~-~~~~A~~lgiP~i~~~  135 (160)
                      .......   +...+ ..+.+++++      .+||+|+. +. ...+ +...|.++|||.+.+.
T Consensus        92 ~~~~~~~---~~~~~-~~l~~~l~~------~kPD~Vi~~gd~~~~l~~~laA~~~~IPv~h~~  145 (403)
T 3ot5_A           92 GQTLAEI---TSRVM-NGINEVIAA------ENPDIVLVHGDTTTSFAAGLATFYQQKMLGHVE  145 (403)
T ss_dssp             CCCHHHH---HHHHH-HHHHHHHHH------HCCSEEEEETTCHHHHHHHHHHHHTTCEEEEES
T ss_pred             CCCHHHH---HHHHH-HHHHHHHHH------cCCCEEEEECCchhHHHHHHHHHHhCCCEEEEE
Confidence            1122211   11111 235556665      58999884 33 3334 4568899999988764

>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*

Probab=95.88  E-value=0.057  Score=40.36  Aligned_cols=38  Identities=16%  Similarity=0.230  Sum_probs=30.3

Q ss_pred             CeEEEEc---CCCCCChHHHHHHHHHHHhCCCEEEEEeCCC
Q 040291            4 PHVLVLP---IPAQGHVIPLLEFSQCLAKQGFRVTFVNTDY   41 (160)
Q Consensus         4 ~~i~~~~---~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~   41 (160)
                      +||+++.   .|..|.-.-...++++|+++||+|++++...
T Consensus         1 MkIl~i~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~~   41 (374)
T 2iw1_A            1 MIVAFCLYKYFPFGGLQRDFMRIASTVAARGHHVRVYTQSW   41 (374)
T ss_dssp             -CEEEECSEECTTCHHHHHHHHHHHHHHHTTCCEEEEESEE
T ss_pred             CeEEEEEeecCCCcchhhHHHHHHHHHHhCCCeEEEEecCC
Confidence            3677774   2456777889999999999999999998763

>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A

Probab=95.85  E-value=0.15  Score=38.19  Aligned_cols=40  Identities=15%  Similarity=0.130  Sum_probs=30.8

Q ss_pred             CCCeEEEEcCCCCCChHHHHHHHHHHHhC-C-CEEEEEeCCCC
Q 040291            2 NRPHVLVLPIPAQGHVIPLLEFSQCLAKQ-G-FRVTFVNTDYD   42 (160)
Q Consensus         2 ~~~~i~~~~~p~~GH~~P~l~la~~L~~r-G-h~Vt~~~~~~~   42 (160)
                      +++||+++. ...++......++++|.++ | |+|.++++...
T Consensus         7 ~~mkIl~v~-~~~~~~~~~~~l~~~L~~~~~~~~v~~~~~~~~   48 (375)
T 3beo_A            7 ERLKVMTIF-GTRPEAIKMAPLVLELQKHPEKIESIVTVTAQH   48 (375)
T ss_dssp             SCEEEEEEE-CSHHHHHHHHHHHHHHTTCTTTEEEEEEECCSS
T ss_pred             cCceEEEEe-cCcHHHHHHHHHHHHHHhCCCCCCeEEEEcCCC
Confidence            357999887 3467778888999999987 5 88887776543

>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*

Probab=95.70  E-value=0.051  Score=40.91  Aligned_cols=110  Identities=13%  Similarity=0.102  Sum_probs=58.8

Q ss_pred             CeEEEEcCCCCCChHHHHHHHHHHHhCCC-EEEEEeCCCChh---hHHhhhccCCCCCCCeee-eecCCCCCCCCCcccH
Q 040291            4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGF-RVTFVNTDYDHK---RIMESLEGKNDLGEQIRL-VSIPDGMEPWEDRNDF   78 (160)
Q Consensus         4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh-~Vt~~~~~~~~~---~~~~~~~~~~~~~~~i~~-~~l~~~~~~~~~~~~~   78 (160)
                      +||++++. ..++...+.+|+++|.++|+ ++.++.+.....   ...+.        .++.+ ..++..  .  .....
T Consensus         1 mkIl~v~~-~~~~~~~~~~l~~~L~~~g~~~~~v~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~--~--~~~~~   67 (384)
T 1vgv_A            1 MKVLTVFG-TRPEAIKMAPLVHALAKDPFFEAKVCVTAQHREMLDQVLKL--------FSIVPDYDLNIM--Q--PGQGL   67 (384)
T ss_dssp             CEEEEEEC-SHHHHHHHHHHHHHHHHSTTCEEEEEECCSSGGGGHHHHHH--------HTCCCSEECCCC--S--TTSCH
T ss_pred             CeEEEEec-ccHHHHHHHHHHHHHHhCCCCceEEEEcCCCHHHHHHHHHH--------cCCCCCcceecC--C--CCccH
Confidence            47888763 35677888999999999994 887765533221   11111        12322 222211  1  01122


Q ss_pred             HHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEecC--CCcc-HHHHHHHhCCccEEEcc
Q 040291           79 GKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADG--YMAW-SMEVAKKMNVRGALFWP  136 (160)
Q Consensus        79 ~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~--~~~~-~~~~A~~lgiP~i~~~~  136 (160)
                      ...   .... ...+.+++++      .+||+|+.-.  ...+ +..+|...|+|++....
T Consensus        68 ~~~---~~~~-~~~l~~~l~~------~~pDvv~~~~~~~~~~~~~~~a~~~~ip~v~~~~  118 (384)
T 1vgv_A           68 TEI---TCRI-LEGLKPILAE------FKPDVVLVHGDTTTTLATSLAAFYQRIPVGHVEA  118 (384)
T ss_dssp             HHH---HHHH-HHHHHHHHHH------HCCSEEEEETTCHHHHHHHHHHHTTTCCEEEESC
T ss_pred             HHH---HHHH-HHHHHHHHHH------hCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEec
Confidence            211   1111 1234455555      5899999632  2233 34567788999987654

>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*

Probab=95.22  E-value=0.035  Score=42.45  Aligned_cols=42  Identities=10%  Similarity=0.078  Sum_probs=34.3

Q ss_pred             CCCCeEEEEcCC--CCCChHHHHHHHHHHHhCCCEEEEEeCCCC
Q 040291            1 MNRPHVLVLPIP--AQGHVIPLLEFSQCLAKQGFRVTFVNTDYD   42 (160)
Q Consensus         1 m~~~~i~~~~~p--~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~   42 (160)
                      |.++||+++...  ..|+-.....++++|.++||+|++++....
T Consensus        38 ~~~mkIl~v~~~~~~GG~~~~~~~l~~~L~~~G~~v~v~~~~~~   81 (416)
T 2x6q_A           38 LKGRSFVHVNSTSFGGGVAEILHSLVPLLRSIGIEARWFVIEGP   81 (416)
T ss_dssp             TTTCEEEEEESCSSSSTHHHHHHHHHHHHHHTTCEEEEEECCCC
T ss_pred             hhccEEEEEeCCCCCCCHHHHHHHHHHHHHhCCCeEEEEEccCC
Confidence            667899877643  357788899999999999999999887654

>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*

Probab=94.77  E-value=0.07  Score=34.99  Aligned_cols=45  Identities=13%  Similarity=0.212  Sum_probs=39.4

Q ss_pred             CCCCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhh
Q 040291            1 MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKR   45 (160)
Q Consensus         1 m~~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~   45 (160)
                      |++++|++.+.++-+|-....-++..|..+|++|..+...-..+.
T Consensus         1 ~~~~~vvla~~~~d~HdiG~~~v~~~l~~~G~~Vi~lG~~~p~e~   45 (137)
T 1ccw_A            1 MEKKTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGVLSPQEL   45 (137)
T ss_dssp             CCCCEEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEEEECHHH
T ss_pred             CCCCEEEEEeCCCchhHHHHHHHHHHHHHCCCEEEECCCCCCHHH
Confidence            888999999999999999999999999999999998876544433

>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7

Probab=94.19  E-value=0.51  Score=35.06  Aligned_cols=102  Identities=10%  Similarity=0.029  Sum_probs=64.7

Q ss_pred             CeEEEEcCCCCCChHHHHHHHHHHHhC--CCEEEEEeCCCChhhHHhhhccCCCCCCCee-eeecCCCCCCCCCcccHHH
Q 040291            4 PHVLVLPIPAQGHVIPLLEFSQCLAKQ--GFRVTFVNTDYDHKRIMESLEGKNDLGEQIR-LVSIPDGMEPWEDRNDFGK   80 (160)
Q Consensus         4 ~~i~~~~~p~~GH~~P~l~la~~L~~r--Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~l~~~~~~~~~~~~~~~   80 (160)
                      +||+++...+.|++.-..++.++|.++  |.+|++++.+...+.+..        .+.++ ++.++.  ...  ....  
T Consensus         1 mkILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~~~l~~~--------~p~i~~v~~~~~--~~~--~~~~--   66 (348)
T 1psw_A            1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLSR--------MPEVNEAIPMPL--GHG--ALEI--   66 (348)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHHTT--------CTTEEEEEEC-----------CH--
T ss_pred             CeEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhc--------CCccCEEEEecC--Ccc--ccch--
Confidence            489999988889999999999999987  999999999866554322        24453 333321  000  0000  


Q ss_pred             HHHHHHHhccHHHHHHHHHHhcCCCCCccEEEecCCC-ccHHHHHHHhCCccEE
Q 040291           81 LFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYM-AWSMEVAKKMNVRGAL  133 (160)
Q Consensus        81 ~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~-~~~~~~A~~lgiP~i~  133 (160)
                                ..+.++.+.+.+   .+||++| |... .-...++...|+|...
T Consensus        67 ----------~~~~~l~~~l~~---~~~D~vi-d~~~~~~sa~~~~~~~~~~~i  106 (348)
T 1psw_A           67 ----------GERRKLGHSLRE---KRYDRAY-VLPNSFKSALVPLFAGIPHRT  106 (348)
T ss_dssp             ----------HHHHHHHHHTTT---TTCSEEE-ECSCCSGGGHHHHHTTCSEEE
T ss_pred             ----------HHHHHHHHHHHh---cCCCEEE-ECCCChHHHHHHHHhCCCEEe
Confidence                      123345555543   5899988 4433 2345677778898743

>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*

Probab=93.89  E-value=0.046  Score=42.37  Aligned_cols=39  Identities=15%  Similarity=0.219  Sum_probs=30.0

Q ss_pred             CCeEEEEcCCCC-----CChHHHHHHHHHHHhCCCEEEEEeCCC
Q 040291            3 RPHVLVLPIPAQ-----GHVIPLLEFSQCLAKQGFRVTFVNTDY   41 (160)
Q Consensus         3 ~~~i~~~~~p~~-----GH~~P~l~la~~L~~rGh~Vt~~~~~~   41 (160)
                      ++||+++.....     |=.....+++++|+++||+|++++...
T Consensus        46 ~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~GheV~Vvt~~~   89 (413)
T 2x0d_A           46 GKRLNLLVPSINQEHMFGGISTALKLFEQFDNKKFKKRIILTDA   89 (413)
T ss_dssp             SCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTTTCEEEEEESSC
T ss_pred             CceEEEEeCCCCccccccHHHHHHHHHHHHHHcCCceEEEEecC
Confidence            578887773322     333568899999999999999999864

>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*

Probab=93.35  E-value=0.047  Score=43.91  Aligned_cols=38  Identities=21%  Similarity=0.303  Sum_probs=28.3

Q ss_pred             CCeEEEEcC---CC--CCCh-HHHHHHHHHHHhCCCEEEEEeCC
Q 040291            3 RPHVLVLPI---PA--QGHV-IPLLEFSQCLAKQGFRVTFVNTD   40 (160)
Q Consensus         3 ~~~i~~~~~---p~--~GH~-~P~l~la~~L~~rGh~Vt~~~~~   40 (160)
                      ++||+++++   |.  .|=+ .-.-.|.++|+++||+|+++++.
T Consensus         9 ~MkIl~vs~E~~P~~K~GGLadvv~~L~~aL~~~G~~V~Vi~P~   52 (536)
T 3vue_A            9 HMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPR   52 (536)
T ss_dssp             CCEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred             CcEEEEEEEeccchhccCcHHHHHHHHHHHHHHcCCeEEEEecC
Confidence            689999962   32  1222 34678999999999999999864

>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*

Probab=92.91  E-value=1.1  Score=34.35  Aligned_cols=36  Identities=25%  Similarity=0.312  Sum_probs=25.1

Q ss_pred             CCeEEEEc---CCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291            3 RPHVLVLP---IPAQGHVIPLLEFSQCLAKQGFRVTFVNTD   40 (160)
Q Consensus         3 ~~~i~~~~---~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~   40 (160)
                      ++||++++   +| .+.-.-...+++.|+++| +|++++..
T Consensus        14 ~MkIl~is~~~~p-~~~~~~~~~l~~~l~~~G-~V~vi~~~   52 (406)
T 2hy7_A           14 RPCYLVLSSHDFR-TPRRANIHFITDQLALRG-TTRFFSLR   52 (406)
T ss_dssp             CSCEEEEESSCTT-SSSCCHHHHHHHHHHHHS-CEEEEECS
T ss_pred             CceEEEEecccCC-ChhhhhHhHHHHHHHhCC-ceEEEEec
Confidence            57899887   44 232223456788999999 99999543

>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*

Probab=92.69  E-value=0.15  Score=37.70  Aligned_cols=91  Identities=21%  Similarity=0.220  Sum_probs=53.1

Q ss_pred             eEEEEc----CCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhHHhhhccCCCCCCCeeeeecCCCCCCCCCcccHHH
Q 040291            5 HVLVLP----IPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIPDGMEPWEDRNDFGK   80 (160)
Q Consensus         5 ~i~~~~----~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~   80 (160)
                      +|+|..    .-|.||+.=.+.||++|.    +|+|++.......+..         -++.+..++.        .+.. 
T Consensus         2 ki~ir~Da~~~IG~GHvmRcl~LA~~l~----~v~F~~~~~~~~~~~~---------~g~~v~~l~~--------~d~~-   59 (282)
T 3hbm_A            2 KVLFRSDSSSQIGFGHIKRDLVLAKQYS----DVSFACLPLEGSLIDE---------IPYPVYELSS--------ESIY-   59 (282)
T ss_dssp             CEEEEECCBTTTBSHHHHHHHHHHTTCS----SEEEEECCCTTCCGGG---------CCSCEEECSS--------SCHH-
T ss_pred             EEEEEEecCCCccccHHHHHHHHHHHHH----hCEEEEecCcHhHHHH---------CCCeEEEcCc--------cCHH-
Confidence            455554    345799999999999999    7999886543322221         2444444431        1111 


Q ss_pred             HHHHHHHhccHHHHHHHHHHhcCCCCCccEEEecCCCccH---HHHHHHhCCccEEE
Q 040291           81 LFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAWS---MEVAKKMNVRGALF  134 (160)
Q Consensus        81 ~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~---~~~A~~lgiP~i~~  134 (160)
                                 .+.+++++      .++|++|.|......   ..+.+..+++.+++
T Consensus        60 -----------~~~~~l~~------~~~d~lIvD~Y~~~~~~~~~lk~~~~~~i~~i   99 (282)
T 3hbm_A           60 -----------ELINLIKE------EKFELLIIDHYGISVDDEKLIKLETGVKILSF   99 (282)
T ss_dssp             -----------HHHHHHHH------HTCSEEEEECTTCCHHHHHHHHHHHCCEEEEE
T ss_pred             -----------HHHHHHHh------CCCCEEEEECCCCCHHHHHHHHHhcCcEEEEE
Confidence                       12233333      367999999866433   23444457777665

>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*

Probab=92.60  E-value=0.2  Score=42.47  Aligned_cols=108  Identities=17%  Similarity=0.178  Sum_probs=53.3

Q ss_pred             HHHHHHHhCCCEEE----EEeCCCChhhHHhhhccC---CCCCCCeeeeecCCCCCC-----CCCcccHHHHHHHHHHhc
Q 040291           22 EFSQCLAKQGFRVT----FVNTDYDHKRIMESLEGK---NDLGEQIRLVSIPDGMEP-----WEDRNDFGKLFEKVLQVM   89 (160)
Q Consensus        22 ~la~~L~~rGh~Vt----~~~~~~~~~~~~~~~~~~---~~~~~~i~~~~l~~~~~~-----~~~~~~~~~~~~~~~~~~   89 (160)
                      +|+++|+++||+||    ++|...... ....+...   ....+++++..+|.+...     .-....++..+..+.   
T Consensus       318 ela~~L~~~G~~V~~~V~v~Tr~~~~~-~g~~y~~~~e~i~~~~gv~I~RvP~~~~~g~l~~~l~k~~L~~~L~~F~---  393 (816)
T 3s28_A          318 EMLQRIKQQGLNIKPRILILTRLLPDA-VGTTCGERLERVYDSEYCDILRVPFRTEKGIVRKWISRFEVWPYLETYT---  393 (816)
T ss_dssp             HHHHHHHHTTCCCCCEEEEEEECCTTC-TTSSTTSSEEECTTCSSEEEEEECEEETTEEECSCCCTTTCGGGHHHHH---
T ss_pred             HHHHHHHHCCCccceeeEEEeCCCCCC-CCCccCCcceeecCcCCeEEEEecCCCccccccccccHHHHHHHHHHHH---
Confidence            58888899999997    666543221 10001000   011146777766632111     001112222222222   


Q ss_pred             cHHHHHHHHHHhcCCCCCccEEEecCCC-c-cHHHHHHHhCCccEEEccc
Q 040291           90 PGKLEELIEDINSREDEKLDCFIADGYM-A-WSMEVAKKMNVRGALFWPS  137 (160)
Q Consensus        90 ~~~~~~ll~~l~~~~~~~~d~vI~D~~~-~-~~~~~A~~lgiP~i~~~~~  137 (160)
                      ...+..+++..    ..+||+|.+-... . .+..+++++|||.|...-+
T Consensus       394 ~~~l~~il~~~----~~~PDVIHsH~~~sglva~llar~~gvP~V~T~Hs  439 (816)
T 3s28_A          394 EDAAVELSKEL----NGKPDLIIGNYSDGNLVASLLAHKLGVTQCTIAHA  439 (816)
T ss_dssp             HHHHHHHHHHC----SSCCSEEEEEHHHHHHHHHHHHHHHTCCEEEECSC
T ss_pred             HHHHHHHHHhc----CCCCeEEEeCCchHHHHHHHHHHHcCCCEEEEEec
Confidence            11233334331    1479999865322 1 2456889999999886544

>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}

Probab=92.31  E-value=1.1  Score=33.65  Aligned_cols=105  Identities=18%  Similarity=0.150  Sum_probs=68.5

Q ss_pred             CCCeEEEEcCCCCCChHHHHHHHHHHHhC--CCEEEEEeCCCChhhHHhhhccCCCCCCCee-eeecCCCCCCCCCcccH
Q 040291            2 NRPHVLVLPIPAQGHVIPLLEFSQCLAKQ--GFRVTFVNTDYDHKRIMESLEGKNDLGEQIR-LVSIPDGMEPWEDRNDF   78 (160)
Q Consensus         2 ~~~~i~~~~~p~~GH~~P~l~la~~L~~r--Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~l~~~~~~~~~~~~~   78 (160)
                      +.++|+++-..+.|++.-..++.++|.++  +.+|++++.+...+.++.        .+.++ ++.++..        ..
T Consensus         7 ~~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~l~~~--------~p~vd~vi~~~~~--------~~   70 (349)
T 3tov_A            7 DYKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQVMEY--------NPNIDELIVVDKK--------GR   70 (349)
T ss_dssp             TTCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGGGTSS--------CTTCSEEEEECCS--------SH
T ss_pred             CCCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhc--------CCCccEEEEeCcc--------cc
Confidence            46799999999999999999999999987  899999999877654432        25665 4444311        11


Q ss_pred             HHHHHHHHHhccHHHHHHHHHHhcCCCCCc-cEEEecCCCccHHHHHHHhCCccEE
Q 040291           79 GKLFEKVLQVMPGKLEELIEDINSREDEKL-DCFIADGYMAWSMEVAKKMNVRGAL  133 (160)
Q Consensus        79 ~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~-d~vI~D~~~~~~~~~A~~lgiP~i~  133 (160)
                      ...+.        .+.++++.+++   .+| |++|.=.-..-...++...|+|..+
T Consensus        71 ~~~~~--------~~~~l~~~Lr~---~~y~D~vidl~~~~rs~~l~~~~~a~~ri  115 (349)
T 3tov_A           71 HNSIS--------GLNEVAREINA---KGKTDIVINLHPNERTSYLAWKIHAPITT  115 (349)
T ss_dssp             HHHHH--------HHHHHHHHHHH---HCCCCEEEECCCSHHHHHHHHHHCCSEEE
T ss_pred             cccHH--------HHHHHHHHHhh---CCCCeEEEECCCChHHHHHHHHhCCCeEE
Confidence            11011        12234444443   579 9988432233355678888988644

>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A

Probab=92.13  E-value=0.17  Score=39.43  Aligned_cols=38  Identities=21%  Similarity=0.275  Sum_probs=29.3

Q ss_pred             CeEEEEcC---C---CCCChHHHHHHHHHHHhCCCEEEEEeCCC
Q 040291            4 PHVLVLPI---P---AQGHVIPLLEFSQCLAKQGFRVTFVNTDY   41 (160)
Q Consensus         4 ~~i~~~~~---p---~~GH~~P~l~la~~L~~rGh~Vt~~~~~~   41 (160)
                      +||++++.   |   ..|=-.-...|+++|+++||+|+++++..
T Consensus         1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~   44 (485)
T 1rzu_A            1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGY   44 (485)
T ss_dssp             CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECC
T ss_pred             CeEEEEeeeeccccccccHHHHHHHHHHHHHHcCCeEEEEeccc
Confidence            47888764   2   23445678899999999999999998754

>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A

Probab=92.00  E-value=0.19  Score=39.12  Aligned_cols=38  Identities=13%  Similarity=0.149  Sum_probs=29.0

Q ss_pred             CeEEEEcC---C---CCCChHHHHHHHHHHHhCCCEEEEEeCCC
Q 040291            4 PHVLVLPI---P---AQGHVIPLLEFSQCLAKQGFRVTFVNTDY   41 (160)
Q Consensus         4 ~~i~~~~~---p---~~GH~~P~l~la~~L~~rGh~Vt~~~~~~   41 (160)
                      +||++++.   |   ..|=-.-...|+++|+++||+|+++++..
T Consensus         1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~   44 (485)
T 2qzs_A            1 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAF   44 (485)
T ss_dssp             CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHHTTCEEEEEEECC
T ss_pred             CeEEEEeeeccccccCCcHHHHHHHHHHHHHHcCCEEEEEecCc
Confidence            47888864   2   23334667899999999999999998754

>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}

Probab=91.87  E-value=1.3  Score=33.92  Aligned_cols=106  Identities=18%  Similarity=0.171  Sum_probs=58.9

Q ss_pred             CCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChh-hHHhhhccCCCCCCCeeeeecCC-CCCCCCCcccHHHHHHHHHHh
Q 040291           11 IPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHK-RIMESLEGKNDLGEQIRLVSIPD-GMEPWEDRNDFGKLFEKVLQV   88 (160)
Q Consensus        11 ~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~-~~~~~~~~~~~~~~~i~~~~l~~-~~~~~~~~~~~~~~~~~~~~~   88 (160)
                      ++++--+.=+.++.++|.++ ++..++.|....+ .+.....      .++.+. -|+ .+...  ..+......   . 
T Consensus        16 ~GtRpe~~k~~p~~~~l~~~-~~~~~~~tgqh~~~~~~~~~~------~~~~i~-~~~~~l~~~--~~~~~~~~~---~-   81 (385)
T 4hwg_A           16 VGTRPELIKLCCVISEFDKH-TKHILVHTGQNYAYELNQVFF------DDMGIR-KPDYFLEVA--ADNTAKSIG---L-   81 (385)
T ss_dssp             ECSHHHHHHHHHHHHHHHHH-SEEEEEECSCHHHHHHTHHHH------C-CCCC-CCSEECCCC--CCCSHHHHH---H-
T ss_pred             EEcCHhHHHHHHHHHHHHhc-CCEEEEEeCCCCChhHHHHHH------hhCCCC-CCceecCCC--CCCHHHHHH---H-
Confidence            47778888899999999887 9988887765433 2211100      122210 111 01111  111211111   1 


Q ss_pred             ccHHHHHHHHHHhcCCCCCccEEEe--cCCCccHHHHHHHhCCccEEEcc
Q 040291           89 MPGKLEELIEDINSREDEKLDCFIA--DGYMAWSMEVAKKMNVRGALFWP  136 (160)
Q Consensus        89 ~~~~~~~ll~~l~~~~~~~~d~vI~--D~~~~~~~~~A~~lgiP~i~~~~  136 (160)
                      .-..+.+++++      .+||+||.  |....++...|.++|||.+.+..
T Consensus        82 ~~~~l~~~l~~------~kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~ea  125 (385)
T 4hwg_A           82 VIEKVDEVLEK------EKPDAVLFYGDTNSCLSAIAAKRRKIPIFHMEA  125 (385)
T ss_dssp             HHHHHHHHHHH------HCCSEEEEESCSGGGGGHHHHHHTTCCEEEESC
T ss_pred             HHHHHHHHHHh------cCCcEEEEECCchHHHHHHHHHHhCCCEEEEeC
Confidence            11235566665      58998774  44555666788999999887653

>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}

Probab=91.28  E-value=0.29  Score=35.50  Aligned_cols=39  Identities=21%  Similarity=0.261  Sum_probs=25.1

Q ss_pred             CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChh
Q 040291            4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHK   44 (160)
Q Consensus         4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~   44 (160)
                      +||++.-==|. +--=+..|+++|.+.| +|+++.+...+.
T Consensus         2 p~ILlTNDDGi-~apGi~~L~~~l~~~g-~V~VvAP~~~~S   40 (251)
T 2wqk_A            2 PTFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLS   40 (251)
T ss_dssp             CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCT
T ss_pred             CEEEEEcCCCC-CcHHHHHHHHHHHhCC-CEEEEeeCCCCc
Confidence            45555542221 2233567888999998 699999877654

>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*

Probab=91.21  E-value=2.7  Score=29.21  Aligned_cols=99  Identities=11%  Similarity=0.092  Sum_probs=61.1

Q ss_pred             CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCC----h-hhHHhhhccCCCCCCCeeeeecCCCCCCCCCccc
Q 040291            3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYD----H-KRIMESLEGKNDLGEQIRLVSIPDGMEPWEDRND   77 (160)
Q Consensus         3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~----~-~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~   77 (160)
                      +..|.+++.++.|=..-.+.+|.+.+.+|.+|-|+.--..    . ..+...        -++++.....++.-  ...+
T Consensus        28 ~g~i~v~tG~GkGKTTaA~GlalRA~g~G~rV~~vQF~Kg~~~~gE~~~l~~--------L~v~~~~~g~gf~~--~~~~   97 (196)
T 1g5t_A           28 RGIIIVFTGNGKGKTTAAFGTAARAVGHGKNVGVVQFIKGTWPNGERNLLEP--------HGVEFQVMATGFTW--ETQN   97 (196)
T ss_dssp             CCCEEEEESSSSCHHHHHHHHHHHHHHTTCCEEEEESSCCSSCCHHHHHHGG--------GTCEEEECCTTCCC--CGGG
T ss_pred             CceEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEEeeCCCCCccHHHHHHh--------CCcEEEEccccccc--CCCC
Confidence            5679999999999999999999999999999999954332    1 112221        14777766554321  1111


Q ss_pred             HHHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEecCCCc
Q 040291           78 FGKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMA  118 (160)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~  118 (160)
                      ...-.    ......++...+.+.+   .++|+||.|-+..
T Consensus        98 ~~~~~----~~a~~~l~~a~~~l~~---~~yDlvILDEi~~  131 (196)
T 1g5t_A           98 READT----AACMAVWQHGKRMLAD---PLLDMVVLDELTY  131 (196)
T ss_dssp             HHHHH----HHHHHHHHHHHHHTTC---TTCSEEEEETHHH
T ss_pred             cHHHH----HHHHHHHHHHHHHHhc---CCCCEEEEeCCCc
Confidence            11111    1112234444444432   5899999998743

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=90.66  E-value=0.2  Score=33.00  Aligned_cols=35  Identities=17%  Similarity=0.228  Sum_probs=28.7

Q ss_pred             CCCCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291            1 MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD   40 (160)
Q Consensus         1 m~~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~   40 (160)
                      |.+.|++++-   .|.+-  ..+++.|.++|++|+++...
T Consensus         1 ~~~~~vlI~G---~G~vG--~~la~~L~~~g~~V~vid~~   35 (153)
T 1id1_A            1 HRKDHFIVCG---HSILA--INTILQLNQRGQNVTVISNL   35 (153)
T ss_dssp             CCCSCEEEEC---CSHHH--HHHHHHHHHTTCCEEEEECC
T ss_pred             CCCCcEEEEC---CCHHH--HHHHHHHHHCCCCEEEEECC
Confidence            7788999884   35554  78899999999999999875

>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0

Probab=90.25  E-value=0.55  Score=32.12  Aligned_cols=41  Identities=12%  Similarity=0.066  Sum_probs=33.5

Q ss_pred             CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhh
Q 040291            4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKR   45 (160)
Q Consensus         4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~   45 (160)
                      +||++.-.++.|=+. ..++.+.|.++|++|.++.++.-.+.
T Consensus         6 k~IllgvTGs~aa~k-~~~ll~~L~~~g~~V~vv~T~~A~~f   46 (175)
T 3qjg_A            6 ENVLICLCGSVNSIN-ISHYIIELKSKFDEVNVIASTNGRKF   46 (175)
T ss_dssp             CEEEEEECSSGGGGG-HHHHHHHHTTTCSEEEEEECTGGGGG
T ss_pred             CEEEEEEeCHHHHHH-HHHHHHHHHHCCCEEEEEECcCHHHH
Confidence            678877777766665 88999999999999999999875543

>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}

Probab=89.35  E-value=0.67  Score=31.08  Aligned_cols=43  Identities=23%  Similarity=0.315  Sum_probs=37.2

Q ss_pred             CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhh
Q 040291            3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKR   45 (160)
Q Consensus         3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~   45 (160)
                      +++|++.+.++.+|-.-..-++..|..+|++|..+......+.
T Consensus        18 ~~~vlla~~~gd~HdiG~~~va~~l~~~G~eVi~lG~~~p~e~   60 (161)
T 2yxb_A           18 RYKVLVAKMGLDGHDRGAKVVARALRDAGFEVVYTGLRQTPEQ   60 (161)
T ss_dssp             SCEEEEEEESSSSCCHHHHHHHHHHHHTTCEEECCCSBCCHHH
T ss_pred             CCEEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCCHHH
Confidence            5789999999999999999999999999999999876544433

>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}

Probab=89.27  E-value=0.93  Score=31.58  Aligned_cols=44  Identities=16%  Similarity=0.162  Sum_probs=38.1

Q ss_pred             CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhH
Q 040291            3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRI   46 (160)
Q Consensus         3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~   46 (160)
                      +++|++.+.++..|-....-++..|.++|++|..+...-..+.+
T Consensus        88 ~~~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~vp~~~l  131 (210)
T 1y80_A           88 VGKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVDIEPGKF  131 (210)
T ss_dssp             CCEEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSSBCHHHH
T ss_pred             CCEEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCCCCCHHHH
Confidence            46899999999999999999999999999999998876544443

>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}

Probab=88.72  E-value=1.2  Score=32.27  Aligned_cols=42  Identities=17%  Similarity=0.134  Sum_probs=37.0

Q ss_pred             CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChh
Q 040291            3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHK   44 (160)
Q Consensus         3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~   44 (160)
                      +++|++.+.++..|-....-++..|.++|++|..+...-..+
T Consensus       123 ~~~vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~~vp~e  164 (258)
T 2i2x_B          123 KGTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGRDVPAE  164 (258)
T ss_dssp             SCEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEEECCSH
T ss_pred             CCeEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCCHH
Confidence            578999999999999999999999999999999987654433

>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0

Probab=88.37  E-value=0.79  Score=32.27  Aligned_cols=43  Identities=16%  Similarity=0.214  Sum_probs=35.8

Q ss_pred             CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhH
Q 040291            3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRI   46 (160)
Q Consensus         3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~   46 (160)
                      +.||++.-.++.|-+. ..+|.++|.++|++|.++.|+.-.+.+
T Consensus         4 ~k~IllgvTGaiaa~k-~~~ll~~L~~~g~eV~vv~T~~A~~fi   46 (209)
T 3zqu_A            4 PERITLAMTGASGAQY-GLRLLDCLVQEEREVHFLISKAAQLVM   46 (209)
T ss_dssp             CSEEEEEECSSSCHHH-HHHHHHHHHHTTCEEEEEECHHHHHHH
T ss_pred             CCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEECccHHHHH
Confidence            4688888888888777 889999999999999999998765444

>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*

Probab=88.08  E-value=0.9  Score=31.97  Aligned_cols=42  Identities=17%  Similarity=0.267  Sum_probs=35.3

Q ss_pred             CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhH
Q 040291            3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRI   46 (160)
Q Consensus         3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~   46 (160)
                      +.||++.-.++.+-+. ..++.++|.++| +|.++.++.-.+.+
T Consensus        19 ~k~IllgvTGsiaa~k-~~~ll~~L~~~g-~V~vv~T~~A~~fv   60 (209)
T 1mvl_A           19 KPRVLLAASGSVAAIK-FGNLCHCFTEWA-EVRAVVTKSSLHFL   60 (209)
T ss_dssp             CCEEEEEECSSGGGGG-HHHHHHHHHTTS-EEEEEECTGGGGTC
T ss_pred             CCEEEEEEeCcHHHHH-HHHHHHHHhcCC-CEEEEEcchHHHhc
Confidence            5789988888888776 899999999999 99999998765443

>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}

Probab=87.94  E-value=0.8  Score=32.21  Aligned_cols=41  Identities=10%  Similarity=-0.070  Sum_probs=30.9

Q ss_pred             CCCeEEEEcCCCCCChHH-HHHHHHHHHhCCCEEEEEeCCCCh
Q 040291            2 NRPHVLVLPIPAQGHVIP-LLEFSQCLAKQGFRVTFVNTDYDH   43 (160)
Q Consensus         2 ~~~~i~~~~~p~~GH~~P-~l~la~~L~~rGh~Vt~~~~~~~~   43 (160)
                      +..||++.-.++ +...- ..++.+.|.++|++|.++.|+.-.
T Consensus         4 ~~k~IllgiTGs-iaayk~~~~ll~~L~~~g~eV~vv~T~~A~   45 (207)
T 3mcu_A            4 KGKRIGFGFTGS-HCTYEEVMPHLEKLIAEGAEVRPVVSYTVQ   45 (207)
T ss_dssp             TTCEEEEEECSC-GGGGTTSHHHHHHHHHTTCEEEEEECC---
T ss_pred             CCCEEEEEEECh-HHHHHHHHHHHHHHHhCCCEEEEEEehHHH
Confidence            457888777675 44554 789999999999999999988654

>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}

Probab=87.42  E-value=1  Score=31.49  Aligned_cols=42  Identities=19%  Similarity=0.021  Sum_probs=33.4

Q ss_pred             CCCeEEEEcCCCCCChH-HHHHHHHHHHhCCCEEEEEeCCCChh
Q 040291            2 NRPHVLVLPIPAQGHVI-PLLEFSQCLAKQGFRVTFVNTDYDHK   44 (160)
Q Consensus         2 ~~~~i~~~~~p~~GH~~-P~l~la~~L~~rGh~Vt~~~~~~~~~   44 (160)
                      +..||++.-.++ +... =..++.++|.++|++|.++.++.-.+
T Consensus         6 ~~k~I~lgiTGs-~aa~~k~~~ll~~L~~~g~eV~vv~T~~A~~   48 (201)
T 3lqk_A            6 AGKHVGFGLTGS-HCTYHEVLPQMERLVELGAKVTPFVTHTVQT   48 (201)
T ss_dssp             TTCEEEEECCSC-GGGGGGTHHHHHHHHHTTCEEEEECSSCSCC
T ss_pred             CCCEEEEEEECh-HHHHHHHHHHHHHHhhCCCEEEEEEChhHHH
Confidence            456888777776 4444 78999999999999999999876543

>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}

Probab=87.03  E-value=1.5  Score=30.89  Aligned_cols=44  Identities=14%  Similarity=0.153  Sum_probs=38.4

Q ss_pred             CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhH
Q 040291            3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRI   46 (160)
Q Consensus         3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~   46 (160)
                      +++|++.+.++..|-....-++..|..+|++|..+...-..+.+
T Consensus        92 ~~~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~i  135 (215)
T 3ezx_A           92 AGLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVDVLNENV  135 (215)
T ss_dssp             CCEEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSSCCHHHH
T ss_pred             CCeEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCCCCHHHH
Confidence            47899999999999999999999999999999998776554443

>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1

Probab=85.09  E-value=0.76  Score=31.95  Aligned_cols=42  Identities=10%  Similarity=-0.024  Sum_probs=33.8

Q ss_pred             CCCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChh
Q 040291            2 NRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHK   44 (160)
Q Consensus         2 ~~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~   44 (160)
                      ++.||++.-.++.|=+. ..++.+.|.++|++|.++.++.-.+
T Consensus         7 ~~k~IllgvTGs~aa~k-~~~l~~~L~~~g~~V~vv~T~~A~~   48 (194)
T 1p3y_1            7 KDKKLLIGICGSISSVG-ISSYLLYFKSFFKEIRVVMTKTAED   48 (194)
T ss_dssp             GGCEEEEEECSCGGGGG-THHHHHHHTTTSSEEEEEECHHHHH
T ss_pred             CCCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEEchhHHH
Confidence            34688888877777665 7899999999999999999876543

>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}

Probab=85.03  E-value=1.9  Score=29.82  Aligned_cols=43  Identities=16%  Similarity=0.169  Sum_probs=35.2

Q ss_pred             CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhHH
Q 040291            4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIM   47 (160)
Q Consensus         4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~   47 (160)
                      .||++.-.++.|-+ =..++.++|.++|++|.++.|+.-.+.+.
T Consensus         2 k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~~i~   44 (189)
T 2ejb_A            2 QKIALCITGASGVI-YGIKLLQVLEELDFSVDLVISRNAKVVLK   44 (189)
T ss_dssp             CEEEEEECSSTTHH-HHHHHHHHHHHTTCEEEEEECHHHHHHHH
T ss_pred             CEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEChhHHHHhh
Confidence            57888888888855 57899999999999999999987655443

>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}

Probab=84.98  E-value=3.1  Score=28.75  Aligned_cols=49  Identities=12%  Similarity=0.205  Sum_probs=37.5

Q ss_pred             HHHHHHHHHHhcCCCCCccEEEecCCCccHHHHHHHhCCccEEEccchHHHHHHH
Q 040291           91 GKLEELIEDINSREDEKLDCFIADGYMAWSMEVAKKMNVRGALFWPSSAASVALL  145 (160)
Q Consensus        91 ~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~~~~~~~~~~  145 (160)
                      ...++.++++.+   .++|+||.|..   ...+|+++|+|.+.+.++.-+....+
T Consensus       129 ~e~~~~i~~l~~---~G~~vvVG~~~---~~~~A~~~Gl~~vli~sg~eSI~~Ai  177 (196)
T 2q5c_A          129 DEITTLISKVKT---ENIKIVVSGKT---VTDEAIKQGLYGETINSGEESLRRAI  177 (196)
T ss_dssp             GGHHHHHHHHHH---TTCCEEEECHH---HHHHHHHTTCEEEECCCCHHHHHHHH
T ss_pred             HHHHHHHHHHHH---CCCeEEECCHH---HHHHHHHcCCcEEEEecCHHHHHHHH
Confidence            456777777776   68999998844   57899999999999988665554443

>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1

Probab=84.92  E-value=1.2  Score=31.20  Aligned_cols=44  Identities=23%  Similarity=0.187  Sum_probs=32.8

Q ss_pred             CCCeEEEEcCCCCCChHHHHHHHHHHHh-CCCEEEEEeCCCChhhH
Q 040291            2 NRPHVLVLPIPAQGHVIPLLEFSQCLAK-QGFRVTFVNTDYDHKRI   46 (160)
Q Consensus         2 ~~~~i~~~~~p~~GH~~P~l~la~~L~~-rGh~Vt~~~~~~~~~~~   46 (160)
                      ++.||++.-.++.+=+. ..++.++|.+ +|++|.++.|+.-.+.+
T Consensus        18 ~~k~IllgvTGsiaa~k-~~~lv~~L~~~~g~~V~vv~T~~A~~fi   62 (206)
T 1qzu_A           18 RKFHVLVGVTGSVAALK-LPLLVSKLLDIPGLEVAVVTTERAKHFY   62 (206)
T ss_dssp             SSEEEEEEECSSGGGGT-HHHHHHHHC---CEEEEEEECTGGGGSS
T ss_pred             CCCEEEEEEeChHHHHH-HHHHHHHHhcccCCEEEEEECHhHHHHh
Confidence            45688888877777554 5899999999 89999999998765443

>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*

Probab=84.79  E-value=9.1  Score=27.60  Aligned_cols=40  Identities=18%  Similarity=0.369  Sum_probs=31.6

Q ss_pred             CCeEEEEc--CCCCCChHHHHHHHHHHHhCCCEEEEEeCCCC
Q 040291            3 RPHVLVLP--IPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYD   42 (160)
Q Consensus         3 ~~~i~~~~--~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~   42 (160)
                      ++++++++  -++.|=..-...||..|+++|.+|.++-.+..
T Consensus        81 ~~kvI~vts~kgG~GKTt~a~nLA~~lA~~G~rVLLID~D~~  122 (271)
T 3bfv_A           81 AVQSIVITSEAPGAGKSTIAANLAVAYAQAGYKTLIVDGDMR  122 (271)
T ss_dssp             CCCEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCSS
T ss_pred             CCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence            34555554  46789899999999999999999999876643

>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1

Probab=84.55  E-value=1.3  Score=30.78  Aligned_cols=43  Identities=16%  Similarity=0.177  Sum_probs=34.5

Q ss_pred             CeEEEEcCCCCCChHHHHHHHHHHHhC-CCEEEEEeCCCChhhHH
Q 040291            4 PHVLVLPIPAQGHVIPLLEFSQCLAKQ-GFRVTFVNTDYDHKRIM   47 (160)
Q Consensus         4 ~~i~~~~~p~~GH~~P~l~la~~L~~r-Gh~Vt~~~~~~~~~~~~   47 (160)
                      +||++.-.++.|-+. ..++.+.|.++ |++|.++.|+.-.+.+.
T Consensus         1 ~~IllgvTGsiaa~k-~~~ll~~L~~~~g~~V~vv~T~~A~~fi~   44 (197)
T 1sbz_A            1 MKLIVGMTGATGAPL-GVALLQALREMPNVETHLVMSKWAKTTIE   44 (197)
T ss_dssp             CEEEEEECSSSCHHH-HHHHHHHHHTCTTCEEEEEECHHHHHHHH
T ss_pred             CEEEEEEeChHHHHH-HHHHHHHHHhccCCEEEEEECchHHHHhH
Confidence            377777777777766 89999999999 99999999987655443

>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*

Probab=83.80  E-value=1.2  Score=30.59  Aligned_cols=41  Identities=7%  Similarity=0.030  Sum_probs=32.3

Q ss_pred             CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhh
Q 040291            4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKR   45 (160)
Q Consensus         4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~   45 (160)
                      .||++.-.++.|=+ =..++.++|.++|++|.++.|+.-.+.
T Consensus         3 k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~f   43 (181)
T 1g63_A            3 GKLLICATASINVI-NINHYIVELKQHFDEVNILFSPSSKNF   43 (181)
T ss_dssp             CCEEEEECSCGGGG-GHHHHHHHHTTTSSCEEEEECGGGGGT
T ss_pred             CEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEchhHHHH
Confidence            46777776776655 578999999999999999999875543

>3cio_A ETK, tyrosine-protein kinase ETK; WZC, escherichia coli tyrosine kinase domain, signaling protein, transferase, inner membrane, membrane; 2.50A {Escherichia coli}

Probab=83.55  E-value=11  Score=27.59  Aligned_cols=38  Identities=18%  Similarity=0.445  Sum_probs=30.7

Q ss_pred             CeEEEEc--CCCCCChHHHHHHHHHHHhCCCEEEEEeCCC
Q 040291            4 PHVLVLP--IPAQGHVIPLLEFSQCLAKQGFRVTFVNTDY   41 (160)
Q Consensus         4 ~~i~~~~--~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~   41 (160)
                      .++++++  -++.|=..-...||..|+++|.+|.++-.+.
T Consensus       104 ~kvI~vts~kgG~GKTtva~nLA~~lA~~G~rVLLID~D~  143 (299)
T 3cio_A          104 NNILMITGATPDSGKTFVSSTLAAVIAQSDQKVLFIDADL  143 (299)
T ss_dssp             CCEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred             CeEEEEECCCCCCChHHHHHHHHHHHHhCCCcEEEEECCC
Confidence            4555554  3678889999999999999999999987654

>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}

Probab=82.93  E-value=1.5  Score=27.87  Aligned_cols=40  Identities=23%  Similarity=0.086  Sum_probs=26.3

Q ss_pred             HHHHHHHhcCCCCCccEEEecCCCcc--HHHHHHH---hCCccEEEcc
Q 040291           94 EELIEDINSREDEKLDCFIADGYMAW--SMEVAKK---MNVRGALFWP  136 (160)
Q Consensus        94 ~~ll~~l~~~~~~~~d~vI~D~~~~~--~~~~A~~---lgiP~i~~~~  136 (160)
                      ++.++.+.+   .+||+||.|..++.  +..++++   .++|.|.++.
T Consensus        43 ~eAl~~~~~---~~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~lTa   87 (123)
T 2lpm_A           43 QEALDIARK---GQFDIAIIDVNLDGEPSYPVADILAERNVPFIFATG   87 (123)
T ss_dssp             HHHHHHHHH---CCSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCBCT
T ss_pred             HHHHHHHHh---CCCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEEec
Confidence            444444443   58999999998865  4555544   4799776543

>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A

Probab=81.50  E-value=12  Score=26.64  Aligned_cols=28  Identities=11%  Similarity=0.100  Sum_probs=24.4

Q ss_pred             CCCCCChHHHHHHHHHHHhCCCEEEEEe
Q 040291           11 IPAQGHVIPLLEFSQCLAKQGFRVTFVN   38 (160)
Q Consensus        11 ~p~~GH~~P~l~la~~L~~rGh~Vt~~~   38 (160)
                      -++.|=..-...|++.|+++|.+|.++=
T Consensus        30 ~t~vGKT~vs~gL~~~L~~~G~~V~~fK   57 (242)
T 3qxc_A           30 NTNAGKTTCARLLAQYCNACGVKTILLK   57 (242)
T ss_dssp             STTSSHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred             CCCCcHHHHHHHHHHHHHhCCCceEEEe
Confidence            3556888899999999999999999974

>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D

Probab=81.24  E-value=3.7  Score=25.40  Aligned_cols=40  Identities=10%  Similarity=0.130  Sum_probs=32.9

Q ss_pred             CCCCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291            1 MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD   40 (160)
Q Consensus         1 m~~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~   40 (160)
                      |+..+|++++..|.|--.-.-.+=+.+.++|.++.+-...
T Consensus         1 M~mkkIll~Cg~G~sTS~l~~k~~~~~~~~gi~~~i~a~~   40 (106)
T 1e2b_A            1 MEKKHIYLFSSAGMSTSLLVSKMRAQAEKYEVPVIIEAFP   40 (106)
T ss_dssp             CCCEEEEEECSSSTTTHHHHHHHHHHHHHSCCSEEEEEEC
T ss_pred             CCCcEEEEECCCchhHHHHHHHHHHHHHHCCCCeEEEEec
Confidence            7788999999999887777778888888999988875443

>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}

Probab=80.68  E-value=2.5  Score=27.21  Aligned_cols=32  Identities=13%  Similarity=0.214  Sum_probs=23.9

Q ss_pred             CCccEEEecCCCcc--HHHHHHHh-------CCccEEEccc
Q 040291          106 EKLDCFIADGYMAW--SMEVAKKM-------NVRGALFWPS  137 (160)
Q Consensus       106 ~~~d~vI~D~~~~~--~~~~A~~l-------giP~i~~~~~  137 (160)
                      .+||+||.|..++.  |..+++++       ++|.+.+...
T Consensus        56 ~~~DlillD~~MP~mdG~el~~~ir~~~~~~~ipvI~lTa~   96 (134)
T 3to5_A           56 GDFDFVVTDWNMPGMQGIDLLKNIRADEELKHLPVLMITAE   96 (134)
T ss_dssp             HCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTCCEEEEESS
T ss_pred             CCCCEEEEcCCCCCCCHHHHHHHHHhCCCCCCCeEEEEECC
Confidence            57999999998875  56666654       4787777554

>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}

Probab=80.15  E-value=1.9  Score=28.62  Aligned_cols=36  Identities=14%  Similarity=0.194  Sum_probs=27.6

Q ss_pred             CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCC
Q 040291            4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYD   42 (160)
Q Consensus         4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~   42 (160)
                      .+++++. +|.| +.|++.+++.|.++|.+|+++ ....
T Consensus        24 ~~~llIa-GG~G-ItPl~sm~~~l~~~~~~v~l~-g~r~   59 (158)
T 3lrx_A           24 GKILAIG-AYTG-IVEVYPIAKAWQEIGNDVTTL-HVTF   59 (158)
T ss_dssp             SEEEEEE-ETTH-HHHHHHHHHHHHHHTCEEEEE-EECB
T ss_pred             CeEEEEE-ccCc-HHHHHHHHHHHHhcCCcEEEE-EeCC
Confidence            4566665 3444 899999999999999999999 5543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	160
d2c1xa1	450	c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-gluc	1e-28
d2pq6a1	473	c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransfe	7e-28
d2acva1	461	c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transf	2e-24
d2vcha1	471	c.87.1.10 (A:6-476) Hydroquinone glucosyltransfera	1e-21
d1rrva_	401	c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Am	1e-11
d1pn3a_	391	c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA	4e-11
d1iira_	401	c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycol	8e-10

>d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]} Length = 450

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDPGT-like
domain: UDP glucose:flavonoid 3-o-glucosyltransferase
species: Grape (Vitis vinifera) [TaxId: 29760]

 Score =  107 bits (267), Expect = 1e-28
 Identities = 30/157 (19%), Positives = 59/157 (37%), Gaps = 1/157 (0%)

Query: 4   PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLV 63
           PHV VL  P   H  PLL   + LA       F              +  + +   I+  
Sbjct: 2   PHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMHTMQCNIKSY 61

Query: 64  SIPDGM-EPWEDRNDFGKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAWSME 122
            I DG+ E +       +  E   +  P    + +    +     + C +AD ++ ++ +
Sbjct: 62  DISDGVPEGYVFAGRPQEDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFAAD 121

Query: 123 VAKKMNVRGALFWPSSAASVALLFHIPKLIDDGIIDS 159
           +A +M V    FW +   S++   +I ++ +   +  
Sbjct: 122 MAAEMGVAWLPFWTAGPNSLSTHVYIDEIREKIGVSG 158

>d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]} Length = 473

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDPGT-like
domain: (Iso)flavonoid glycosyltransferase
species: Medicago truncatula [TaxId: 3880]

 Score =  105 bits (261), Expect = 7e-28
 Identities = 47/162 (29%), Positives = 87/162 (53%), Gaps = 6/162 (3%)

Query: 3   RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMES-LEGKNDLGEQIR 61
           +PHV+++P P QGH+ PL + ++ L  +GF +TFVNT+Y+HKR+++S      D      
Sbjct: 1   KPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFN 60

Query: 62  LVSIPDGMEPWEDRNDFGKLFEKVLQVMPGKLEELIEDI-----NSREDEKLDCFIADGY 116
             SIPDG+ P E   D  +    + Q +     +   ++     +S     + C ++D  
Sbjct: 61  FESIPDGLTPMEGDGDVSQDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCC 120

Query: 117 MAWSMEVAKKMNVRGALFWPSSAASVALLFHIPKLIDDGIID 158
           M+++++ A++  +   L++ SSA S+  + H    ++ GII 
Sbjct: 121 MSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSFVERGIIP 162

>d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]} Length = 461

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDPGT-like
domain: Triterpene UDP-glucosyl transferase UGT71G1
species: Medicago truncatula [TaxId: 3880]

 Score = 96.0 bits (237), Expect = 2e-24
 Identities = 28/161 (17%), Positives = 62/161 (38%), Gaps = 7/161 (4%)

Query: 2   NRPHVLVLPIPAQGHVIPLLEFSQCLAKQG--FRVTFVNTDYDHKRIMES-LEGKNDLGE 58
               ++ +P P  GH+   LEF++ L        +T     +      +S ++       
Sbjct: 6   KNSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVLASQP 65

Query: 59  QIRLVSIPDGM-EPWEDRNDFGKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYM 117
           QI+L+ +P+    P E            L+ +   ++  I+ I S    K+   + D + 
Sbjct: 66  QIQLIDLPEVEPPPQELLKSPEFYILTFLESLIPHVKATIKTILSN---KVVGLVLDFFC 122

Query: 118 AWSMEVAKKMNVRGALFWPSSAASVALLFHIPKLIDDGIID 158
              ++V  +  +   LF  S+   ++L+  +     + + D
Sbjct: 123 VSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQIEEVFD 163

>d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 471

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDPGT-like
domain: Hydroquinone glucosyltransferase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 87.9 bits (216), Expect = 1e-21
 Identities = 34/159 (21%), Positives = 63/159 (39%), Gaps = 4/159 (2%)

Query: 4   PHVLVLPIPAQGHVIPLLEFSQCLAKQ-GFRVTFVNTDYDHKRIMESLEGKNDLGEQIRL 62
           PHV ++P P  GH+IPL+EF++ L    G  VTFV          +     + L   I  
Sbjct: 2   PHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRT-VLDSLPSSISS 60

Query: 63  VSIPDGM-EPWEDRNDFGKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAWSM 121
           V +P                    +     +L ++ +             + D +   + 
Sbjct: 61  VFLPPVDLTDLSSSTRIESRISLTVTRSNPELRKVFDS-FVEGGRLPTALVVDLFGTDAF 119

Query: 122 EVAKKMNVRGALFWPSSAASVALLFHIPKLIDDGIIDSN 160
           +VA + +V   +F+P++A  ++   H+PKL +    +  
Sbjct: 120 DVAVEFHVPPYIFYPTTANVLSFFLHLPKLDETVSCEFR 158

>d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} Length = 401

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: TDP-vancosaminyltransferase GftD
species: Amycolatopsis orientalis [TaxId: 31958]

 Score = 59.3 bits (142), Expect = 1e-11
 Identities = 14/137 (10%), Positives = 34/137 (24%), Gaps = 11/137 (8%)

Query: 6   VLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSI 65
           VL+     +G V   +  +  L   G +          +  +  +         +  V +
Sbjct: 3   VLLSVCGTRGDVEIGVALADRLKALGVQTRMC-APPAAEERLAEVG--------VPHVPV 53

Query: 66  PDGMEPWEDRNDFGKLFEKVLQVMPGKLEELIEDINS--REDEKLDCFIADGYMAWSMEV 123
                            E+  ++    +E   + +         +              V
Sbjct: 54  GLPQHMMLQEGMPPPPPEEEQRLAAMTVEMQFDAVPGAAEGCAAVVAVGDLAAATGVRSV 113

Query: 124 AKKMNVRGALFWPSSAA 140
           A+K+ +      PS   
Sbjct: 114 AEKLGLPFFYSVPSPVY 130

>d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} Length = 391

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: TDP-epi-vancosaminyltransferase GtfA
species: Amycolatopsis orientalis [TaxId: 31958]

 Score = 57.8 bits (138), Expect = 4e-11
 Identities = 19/138 (13%), Positives = 46/138 (33%), Gaps = 15/138 (10%)

Query: 6   VLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSI 65
           VL+    ++G   PL+  +  L + G          D+      +         + +V +
Sbjct: 3   VLITGCGSRGDTEPLVALAARLRELGADARMC-LPPDYVERCAEVG--------VPMVPV 53

Query: 66  PDGMEPWEDRNDFGKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAWSM---E 122
              +       + G+L     +V+   + E  + +     E  D  +  G +  ++    
Sbjct: 54  GRAVR--AGAREPGELPPGAAEVVTEVVAEWFDKV-PAAIEGCDAVVTTGLLPAAVAVRS 110

Query: 123 VAKKMNVRGALFWPSSAA 140
           +A+K+ +       S   
Sbjct: 111 MAEKLGIPYRYTVLSPDH 128

>d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} Length = 401

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: UDP-glucosyltransferase GtfB
species: Amycolatopsis orientalis [TaxId: 31958]

 Score = 54.0 bits (128), Expect = 8e-10
 Identities = 17/145 (11%), Positives = 36/145 (24%), Gaps = 12/145 (8%)

Query: 6   VLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSI 65
           VL+    ++G   PL+  +  +   G  V       D    +  +         +  V +
Sbjct: 3   VLLATCGSRGDTEPLVALAVRVRDLGADVRMC-APPDCAERLAEVG--------VPHVPV 53

Query: 66  PDGMEPWEDRNDFG---KLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAWSME 122
                    R        +     + +  + +E+               +A      S+ 
Sbjct: 54  GPSARAPIQRAKPLTAEDVRRFTTEAIATQFDEIPAAAEGCAAVVTTGLLAAAIGVRSVA 113

Query: 123 VAKKMNVRGALFWPSSAASVALLFH 147
               +    A   PS   S      
Sbjct: 114 EKLGIPYFYAFHCPSYVPSPYYPPP 138

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	160
d2c1xa1	450	UDP glucose:flavonoid 3-o-glucosyltransferase {Gra	99.85
d2acva1	461	Triterpene UDP-glucosyl transferase UGT71G1 {Medic	99.84
d2pq6a1	473	(Iso)flavonoid glycosyltransferase {Medicago trunc	99.82
d2vcha1	471	Hydroquinone glucosyltransferase {Thale cress (Ara	99.8
d1pn3a_	391	TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi	99.66
d1rrva_	401	TDP-vancosaminyltransferase GftD {Amycolatopsis or	99.61
d1iira_	401	UDP-glucosyltransferase GtfB {Amycolatopsis orient	99.56
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	98.58
d2bisa1	437	Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI	96.91
d1ccwa_	137	Glutamate mutase, small subunit {Clostridium cochl	96.32
d1rzua_	477	Glycogen synthase 1, GlgA {Agrobacterium tumefacie	95.73
d2iw1a1	370	Lipopolysaccharide core biosynthesis protein RfaG	94.43
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	92.4
d1ep3b2	160	Dihydroorotate dehydrogenase B, PyrK subunit {Lact	90.84
d1o6ca_	377	UDP-N-acetylglucosamine 2-epimerase {Bacillus subt	90.67
d1v4va_	373	UDP-N-acetylglucosamine 2-epimerase {Thermus therm	89.95
d1j9ja_	247	SurE homolog TM1662 {Thermotoga maritima [TaxId: 2	89.78
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	88.55
d1pswa_	348	ADP-heptose LPS heptosyltransferase II {Escherichi	88.0
d7reqa2	168	Methylmalonyl-CoA mutase alpha subunit, C-terminal	87.88
d3bula2	156	Methionine synthase, C-terminal domain {Escherichi	87.57
d1f6da_	376	UDP-N-acetylglucosamine 2-epimerase {Escherichia c	87.26
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	86.31
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	86.28
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	84.74
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	84.37
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	83.09
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	82.78
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	82.26
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	81.93
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	81.78
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	81.49
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	81.19
d1tqha_	242	Carboxylesterase Est {Bacillus stearothermophilus	81.01
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	80.65
d1qzua_	181	4'-phosphopantothenoylcysteine decarboxylase (PPC	80.58
d1uxoa_	186	Hypothetical protein YdeN {Bacillus subtilis [TaxI	80.4
d1krwa_	123	NTRC receiver domain {Salmonella typhimurium [TaxI	80.39

>d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDPGT-like
domain: UDP glucose:flavonoid 3-o-glucosyltransferase
species: Grape (Vitis vinifera) [TaxId: 29760]

Probab=99.85  E-value=4.7e-21  Score=147.93  Aligned_cols=147  Identities=18%  Similarity=0.272  Sum_probs=98.2

Q ss_pred             CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhHHhhhccCCCCCCCeeeeecCCCCCCCC-CcccH---
Q 040291            3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIPDGMEPWE-DRNDF---   78 (160)
Q Consensus         3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~-~~~~~---   78 (160)
                      .+||+++|+|+.||++|++.||++|++|||+||+++.....................+++..++++.+... ...+.   
T Consensus         1 ~~hvl~~p~P~~gH~~p~l~la~~L~~rGH~Vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (450)
T d2c1xa1           1 NPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMHTMQCNIKSYDISDGVPEGYVFAGRPQED   80 (450)
T ss_dssp             CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC-------CTTEEEEECCCCCCTTCCCCCCTTHH
T ss_pred             CCEEEEECchhHhHHHHHHHHHHHHHHCCCcEEEEEccCccchhhhhcccccccCCCceeeecCCCCCcchhhccchHHH
Confidence            37999999999999999999999999999999998754332211110000011234578888887665432 11222   


Q ss_pred             -HHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEecCCCccHHHHHHHhCCccEEEccchHHHHHHHHchhhHHh
Q 040291           79 -GKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAWSMEVAKKMNVRGALFWPSSAASVALLFHIPKLID  153 (160)
Q Consensus        79 -~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~~~~~~~~~~~~~~~l~~  153 (160)
                       ..+.......+.+.+.+.++.   .. .++|+||+|.+..|+..+|+++|+|++.++++++...+....++....
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~---~~-~~~Dlvi~D~~~~~~~~~a~~~~~p~v~~~~~~~~~~~~~~~~~~~~~  152 (450)
T d2c1xa1          81 IELFTRAAPESFRQGMVMAVAE---TG-RPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIRE  152 (450)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHH---HT-CCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHHHHHH
T ss_pred             HHHHHHHHHHHhHHHHHHHHHh---CC-CCCeEEEECCccHHHHHHHHHhCCCEEEEecCchhhhhhhhccccccc
Confidence             222222222222233333332   12 689999999999999999999999999999999998888777765443

>d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDPGT-like
domain: Triterpene UDP-glucosyl transferase UGT71G1
species: Medicago truncatula [TaxId: 3880]

Probab=99.84  E-value=6.4e-21  Score=146.98  Aligned_cols=145  Identities=17%  Similarity=0.289  Sum_probs=105.7

Q ss_pred             CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEE--EeCCCChhhHHhh-hccCCCCCCCeeeeecCCCCCCCC-CcccH
Q 040291            3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTF--VNTDYDHKRIMES-LEGKNDLGEQIRLVSIPDGMEPWE-DRNDF   78 (160)
Q Consensus         3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~--~~~~~~~~~~~~~-~~~~~~~~~~i~~~~l~~~~~~~~-~~~~~   78 (160)
                      ..||+++|+|+.||++|++.||++|++|||+||+  ++++......... .........++++..++++.+... .....
T Consensus         7 ~~hil~~p~P~~GH~~P~l~lA~~L~~rGH~V~vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (461)
T d2acva1           7 NSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVLASQPQIQLIDLPEVEPPPQELLKSP   86 (461)
T ss_dssp             CEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHHHCSCTTEEEEECCCCCCCCGGGGGSH
T ss_pred             CCeEEEecChhhhHHHHHHHHHHHHHHCCCCeEEEEEeCCccchhhhhhcccccccCCCCeeEEECCCCCCchhhhhhcH
Confidence            3599999999999999999999999999998764  5554432221111 100012235788888876654332 22334


Q ss_pred             HHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEecCCCccHHHHHHHhCCccEEEccchHHHHHHHHchhh
Q 040291           79 GKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAWSMEVAKKMNVRGALFWPSSAASVALLFHIPK  150 (160)
Q Consensus        79 ~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~~~~~~~~~~~~~~~  150 (160)
                      ......+.+.+.+.++++++.+..   .++|++|.|.+..|+..+|+++|+|++.++++++...+.+.+++.
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~d~vi~d~~~~~~~~~a~~~~~p~~~~~~~~~~~~~~~~~~~~  155 (461)
T d2acva1          87 EFYILTFLESLIPHVKATIKTILS---NKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKN  155 (461)
T ss_dssp             HHHHHHHHHHTHHHHHHHHHHHCC---TTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGGG
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcc---CCCeEEEEeccchHHHHHHHHhCCCeEEEecccchhhHHhhcccc
Confidence            444445556666778888888764   689999999999999999999999999999999988888777664

>d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDPGT-like
domain: (Iso)flavonoid glycosyltransferase
species: Medicago truncatula [TaxId: 3880]

Probab=99.82  E-value=8.1e-20  Score=140.98  Aligned_cols=155  Identities=33%  Similarity=0.623  Sum_probs=104.4

Q ss_pred             CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhHHhhhccC-CCCCCCeeeeecCCCCCCCC----Cccc
Q 040291            3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGK-NDLGEQIRLVSIPDGMEPWE----DRND   77 (160)
Q Consensus         3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~l~~~~~~~~----~~~~   77 (160)
                      |+||+++|+|+.||++|+++||++|++|||+|||++++...+.+.+..... ......+++..++++.....    ....
T Consensus         1 ~~hvl~~p~p~~gH~~P~~~lA~~L~~rGH~Vt~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (473)
T d2pq6a1           1 KPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIPDGLTPMEGDGDVSQD   80 (473)
T ss_dssp             CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC------------CEEEEEECCCCC---------CC
T ss_pred             CCEEEEECchhhhHHHHHHHHHHHHHHCCCeEEEEeCcchHhHHhhccCcccccCCCCcceeecCCCCcccccccchhhh
Confidence            689999999999999999999999999999999999987666554332110 11223577777776544321    1123


Q ss_pred             HHHHHHHHHHhccHHHHHHHHHHhcCC-CCCccEEEecCCCccHHHHHHHhCCccEEEccchHHHHHHHHchhhHHhcCC
Q 040291           78 FGKLFEKVLQVMPGKLEELIEDINSRE-DEKLDCFIADGYMAWSMEVAKKMNVRGALFWPSSAASVALLFHIPKLIDDGI  156 (160)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~ll~~l~~~~-~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~~~~~~~~~~~~~~~l~~~~~  156 (160)
                      .......+...+...+.+....+.... ..++|++|.|....++..+|+++|+|++.+++.++.....+.+.+.......
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~a~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (473)
T d2pq6a1          81 VPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSFVERGI  160 (473)
T ss_dssp             HHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHHHTTHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeEEEecCcchhhHHHHHHhCCCceeeccccchhhhhhhcccccccccC
Confidence            334444443333334444444433221 2468999999999999999999999999999999988888877776655444


Q ss_pred             C
Q 040291          157 I  157 (160)
Q Consensus       157 ~  157 (160)
                      .
T Consensus       161 ~  161 (473)
T d2pq6a1         161 I  161 (473)
T ss_dssp             S
T ss_pred             C
Confidence            3

>d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDPGT-like
domain: Hydroquinone glucosyltransferase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.80  E-value=6.7e-19  Score=135.86  Aligned_cols=148  Identities=23%  Similarity=0.369  Sum_probs=102.3

Q ss_pred             CCeEEEEcCCCCCChHHHHHHHHHHHh-CCCEEEEEeCCCChhhHHhhhccCCCCCCCeeeeecCCCCCCC-CCcccHHH
Q 040291            3 RPHVLVLPIPAQGHVIPLLEFSQCLAK-QGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIPDGMEPW-EDRNDFGK   80 (160)
Q Consensus         3 ~~~i~~~~~p~~GH~~P~l~la~~L~~-rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~-~~~~~~~~   80 (160)
                      .+||+++|+|++||++|+++||++|++ |||+|||++++............. .....+....++...... ....+...
T Consensus         1 ~~hil~~p~p~~GH~~P~l~La~~L~~~rGH~Vt~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (471)
T d2vcha1           1 TPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLD-SLPSSISSVFLPPVDLTDLSSSTRIES   79 (471)
T ss_dssp             CCEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHHHC--CCTTEEEEECCCCCCTTSCTTCCHHH
T ss_pred             CCEEEEECchhHhHHHHHHHHHHHHHHccCCEEEEEeCCCcchhhhhhcccc-cCCCCcceeecCcccccccccccchHH
Confidence            379999999999999999999999975 899999999876543322111000 011234555554321111 12234444


Q ss_pred             HHHHHHHhccHHHHHHHHHHhcCCCCCccEEEecCCCccHHHHHHHhCCccEEEccchHHHHHHHHchhhHH
Q 040291           81 LFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAWSMEVAKKMNVRGALFWPSSAASVALLFHIPKLI  152 (160)
Q Consensus        81 ~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~~~~~~~~~~~~~~~~l~  152 (160)
                      .+..+...+...+++..+.+.... .++|++|.|.+..++..+++++|+|.+.++++++...+.+.+.|...
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~~~~~~~~~a~~~~~p~~~~~~~~~~~~~~~~~~~~~~  150 (471)
T d2vcha1          80 RISLTVTRSNPELRKVFDSFVEGG-RLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLD  150 (471)
T ss_dssp             HHHHHHHTTHHHHHHHHHHHHHTT-CCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcC-CCCcEEEEeccchHHHHHHHHhCCCcccccccchhhHHHhhcCcccc
Confidence            445555556666666666655433 57899999999999999999999999999999888887777666543

>d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: TDP-epi-vancosaminyltransferase GtfA
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=99.66  E-value=4e-17  Score=123.13  Aligned_cols=119  Identities=15%  Similarity=0.190  Sum_probs=83.2

Q ss_pred             CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhHHhhhccCCCCCCCeeeeecCCCCCCC-CC----cccH
Q 040291            4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIPDGMEPW-ED----RNDF   78 (160)
Q Consensus         4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~-~~----~~~~   78 (160)
                      |||++.+.++.||++|++.||++|++|||+|||++++...+.+++         .|+++++++...... ..    ....
T Consensus         1 mril~~~~gt~Ghi~P~laLA~~L~~rGh~V~~~~~~~~~~~v~~---------~g~~~~~~~~~~~~~~~~~~~~~~~~   71 (391)
T d1pn3a_           1 MRVLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCAE---------VGVPMVPVGRAVRAGAREPGELPPGA   71 (391)
T ss_dssp             CEEEEEEESSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH---------HTCCEEECSSCSSGGGSCTTCCCTTC
T ss_pred             CEEEEEcCCChhHHHHHHHHHHHHHHCCCEEEEEEChhhHhHHHH---------CCCeEEECCccHHHHhhChhhhhHHH
Confidence            699999999999999999999999999999999999888777765         478888887543211 00    0111


Q ss_pred             HHHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEecCCCcc---HHHHHHHhCCccEEEccchH
Q 040291           79 GKLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAW---SMEVAKKMNVRGALFWPSSA  139 (160)
Q Consensus        79 ~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~---~~~~A~~lgiP~i~~~~~~~  139 (160)
                      .....   ......++.+.+.+     .++|++|+|.+.++   +..+|+++++|++.+...+.
T Consensus        72 ~~~~~---~~~~~~~~~l~~~~-----~~~D~vi~~~~~~~~~~~~~~a~~~~i~~~~~~~~~~  127 (391)
T d1pn3a_          72 AEVVT---EVVAEWFDKVPAAI-----EGCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPD  127 (391)
T ss_dssp             GGGHH---HHHHHHHHHHHHHH-----TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGG
T ss_pred             HHHHH---HHHHHHHHHHHHHh-----cCCCeEEEcccCchHHHHHHHHHHcCCceEEeecccc
Confidence            11111   11122233333332     46899999988654   35689999999999876543

>d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: TDP-vancosaminyltransferase GftD
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=99.61  E-value=1.3e-15  Score=115.00  Aligned_cols=123  Identities=12%  Similarity=-0.019  Sum_probs=82.9

Q ss_pred             CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhHHhhhccCCCCCCCeeeeecCCCCCC----CCCcccHH
Q 040291            4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIPDGMEP----WEDRNDFG   79 (160)
Q Consensus         4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~----~~~~~~~~   79 (160)
                      |||+++++|+.||++|++.||++|++|||+|||++++...+.+++         .++++++++.....    ........
T Consensus         1 mrIl~~~~gt~Ghv~P~l~lA~~L~~rGh~V~~~t~~~~~~~v~~---------~g~~~~~~~~~~~~~~~~~~~~~~~~   71 (401)
T d1rrva_           1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLAE---------VGVPHVPVGLPQHMMLQEGMPPPPPE   71 (401)
T ss_dssp             CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH---------HTCCEEECSCCGGGCCCTTSCCCCHH
T ss_pred             CeEEEECCCChhHHHHHHHHHHHHHHCCCEEEEEEChhhHHHHHH---------CCCeEEEcCCcHHhhhccccccccHH
Confidence            699999999999999999999999999999999999888777765         37888877532111    11112222


Q ss_pred             HHHHHHHHhccHHHHHHHHHHhcCCCCCccEEEecCCC-ccHHHHHHHhCCccEEEccch
Q 040291           80 KLFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYM-AWSMEVAKKMNVRGALFWPSS  138 (160)
Q Consensus        80 ~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~-~~~~~~A~~lgiP~i~~~~~~  138 (160)
                      ...... ........+.++++...  .++|++|.|... .++..+|+++|+|++...+.+
T Consensus        72 ~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~~a~~~~~p~~~~~~~~  128 (401)
T d1rrva_          72 EEQRLA-AMTVEMQFDAVPGAAEG--CAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSP  128 (401)
T ss_dssp             HHHHHH-HHHHHHHHHHHHHHTTT--CSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSG
T ss_pred             HHHHHH-HHHHHHHHHHHHHHHhc--CCCeEEEEcCchhhHHHHHHHHhCCCcccccccc
Confidence            222211 11112222333333221  578999988755 456779999999999876654

>d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: UDP-glucosyltransferase GtfB
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=99.56  E-value=2.3e-14  Score=107.70  Aligned_cols=121  Identities=14%  Similarity=0.156  Sum_probs=79.9

Q ss_pred             CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhHHhhhccCCCCCCCeeeeecCCCCCCC--C-CcccHHH
Q 040291            4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIPDGMEPW--E-DRNDFGK   80 (160)
Q Consensus         4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~--~-~~~~~~~   80 (160)
                      |||+++++|++||++|++.||++|++|||+|||++++...+.+.+         .|++|.+++.+....  . .......
T Consensus         1 mkil~~~~gt~Gh~~P~lala~~L~~~Gh~V~~~~~~~~~~~v~~---------~g~~~~~i~~~~~~~~~~~~~~~~~~   71 (401)
T d1iira_           1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLAE---------VGVPHVPVGPSARAPIQRAKPLTAED   71 (401)
T ss_dssp             CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHH---------TTCCEEECCC-------CCSCCCHHH
T ss_pred             CEEEEECCCChhHHHHHHHHHHHHHHCCCEEEEEeCcchHHHHHH---------cCCeEEECCcchhhhhhccccchHHH
Confidence            589999999999999999999999999999999999888877765         589998887543221  1 1112222


Q ss_pred             HHHHHHHhccHHHHHHHHHHhcCCCCCccEEEecCCCcc---HHHHHHHhCCccEEEccch
Q 040291           81 LFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAW---SMEVAKKMNVRGALFWPSS  138 (160)
Q Consensus        81 ~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~---~~~~A~~lgiP~i~~~~~~  138 (160)
                      +...........++.+.+. .    .+++.++.+.+..+   ...+++.+++|.....+..
T Consensus        72 ~~~~~~~~~~~~~~~l~~~-~----~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~  127 (401)
T d1iira_          72 VRRFTTEAIATQFDEIPAA-A----EGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCP  127 (401)
T ss_dssp             HHHHHHHHHHHHHHHHHHH-T----TTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSG
T ss_pred             HHHHHHHHHHHHHHHHHHH-h----hcCcceEEeecchhHHHHHHHHHHhccccccccccc
Confidence            2222222222223333322 1    35677777766543   4568899999988876644

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=98.58  E-value=2.1e-07  Score=68.15  Aligned_cols=115  Identities=17%  Similarity=0.176  Sum_probs=67.3

Q ss_pred             CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCCh-hhHHhhhccCCCCCCCeeeeecCCCCCCCCCcccHHHHH
Q 040291            4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDH-KRIMESLEGKNDLGEQIRLVSIPDGMEPWEDRNDFGKLF   82 (160)
Q Consensus         4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~   82 (160)
                      .||++.+.+..||++|.+.|+++|.++||+|+|+++.... ..+...        .++.+..++......   .......
T Consensus         1 kkili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~---~~~~~~~   69 (351)
T d1f0ka_           1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPK--------HGIEIDFIRISGLRG---KGIKALI   69 (351)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGGG--------GTCEEEECCCCCCTT---CCHHHHH
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEEeCCcchhhcccc--------cCCcEEEEECCCcCC---CCHHHHH
Confidence            4788888543399999999999999999999999875432 222211        356665554321111   1111111


Q ss_pred             HH---HHHhccHHHHHHHHHHhcCCCCCccEEEecC--CCccHHHHHHHhCCccEEEcc
Q 040291           83 EK---VLQVMPGKLEELIEDINSREDEKLDCFIADG--YMAWSMEVAKKMNVRGALFWP  136 (160)
Q Consensus        83 ~~---~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~--~~~~~~~~A~~lgiP~i~~~~  136 (160)
                      ..   ..... .....++++      .++|.++...  ...+....|..+++|.+....
T Consensus        70 ~~~~~~~~~~-~~~~~i~~~------~~~~~~~~~~~~~~~~~~~~a~~~~ip~~~~~~  121 (351)
T d1f0ka_          70 AAPLRIFNAW-RQARAIMKA------YKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQ  121 (351)
T ss_dssp             TCHHHHHHHH-HHHHHHHHH------HCCSEEEECSSTTHHHHHHHHHHTTCCEEEEEC
T ss_pred             HHHHHHHHhH-HHHHHHhhc------cccceeeecccchhhhhhhhhhhcccceeeccc
Confidence            10   00111 112334444      4778777543  345566789999999998643

>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Pyrococcus abyssi [TaxId: 29292]

Probab=96.91  E-value=0.0082  Score=44.04  Aligned_cols=37  Identities=30%  Similarity=0.406  Sum_probs=27.3

Q ss_pred             CeEEEEcC---CC-CCCh-HHHHHHHHHHHhCCCEEEEEeCC
Q 040291            4 PHVLVLPI---PA-QGHV-IPLLEFSQCLAKQGFRVTFVNTD   40 (160)
Q Consensus         4 ~~i~~~~~---p~-~GH~-~P~l~la~~L~~rGh~Vt~~~~~   40 (160)
                      |||++++.   |. .|=+ .-...|+++|+++||+||++++.
T Consensus         1 MkIl~~~~~~pP~~~GG~~~~~~~La~~L~~~Gh~V~Vvtp~   42 (437)
T d2bisa1           1 MKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPS   42 (437)
T ss_dssp             CEEEEECSCCTTCCSSSHHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred             CEEEEECCccCCcccCCHHHHHHHHHHHHHHcCCEEEEEecC
Confidence            58999884   43 1323 23457999999999999999864

>d1ccwa_ c.23.6.1 (A:) Glutamate mutase, small subunit {Clostridium cochlearium [TaxId: 1494]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Cobalamin (vitamin B12)-binding domain
family: Cobalamin (vitamin B12)-binding domain
domain: Glutamate mutase, small subunit
species: Clostridium cochlearium [TaxId: 1494]

Probab=96.32  E-value=0.004  Score=39.56  Aligned_cols=45  Identities=13%  Similarity=0.212  Sum_probs=40.2

Q ss_pred             CCCCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhh
Q 040291            1 MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKR   45 (160)
Q Consensus         1 m~~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~   45 (160)
                      |++.+|++.+.++-+|.....-++..|..+|++|.++...-..+.
T Consensus         1 ~~k~kVvi~~~~gD~H~lG~~mva~~l~~~G~~V~~LG~~~p~e~   45 (137)
T d1ccwa_           1 MEKKTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGVLSPQEL   45 (137)
T ss_dssp             CCCCEEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEEEECHHH
T ss_pred             CCCCEEEEEecCCChhHHHHHHHHHHHHHCCCeEEecccccCHHH
Confidence            789999999999999999999999999999999999987544433

>d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=95.73  E-value=0.0061  Score=45.98  Aligned_cols=37  Identities=19%  Similarity=0.225  Sum_probs=26.3

Q ss_pred             CeEEEEcC---CC--CCCh-HHHHHHHHHHHhCCCEEEEEeCC
Q 040291            4 PHVLVLPI---PA--QGHV-IPLLEFSQCLAKQGFRVTFVNTD   40 (160)
Q Consensus         4 ~~i~~~~~---p~--~GH~-~P~l~la~~L~~rGh~Vt~~~~~   40 (160)
                      |||+++++   |.  .|=+ .-+..|+++|++|||+|+++++.
T Consensus         1 M~i~~v~~e~~P~~~~GGl~~vv~~La~~L~~~Gh~V~Vi~P~   43 (477)
T d1rzua_           1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPG   43 (477)
T ss_dssp             CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred             CEEEEEEEeeecccccCcHHHHHHHHHHHHHHcCCeEEEEecC
Confidence            57888863   21  1211 34568999999999999999853

>d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Lipopolysaccharide core biosynthesis protein RfaG
species: Escherichia coli [TaxId: 562]

Probab=94.43  E-value=0.019  Score=40.68  Aligned_cols=30  Identities=17%  Similarity=0.313  Sum_probs=25.8

Q ss_pred             CCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291           11 IPAQGHVIPLLEFSQCLAKQGFRVTFVNTD   40 (160)
Q Consensus        11 ~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~   40 (160)
                      +|..|--.-+..||++|+++||+|++++..
T Consensus        10 ~p~GG~e~~~~~la~~L~~~G~~V~v~~~~   39 (370)
T d2iw1a1          10 FPFGGLQRDFMRIASTVAARGHHVRVYTQS   39 (370)
T ss_dssp             CTTCHHHHHHHHHHHHHHHTTCCEEEEESE
T ss_pred             CCCCCHHHHHHHHHHHHHHCCCEEEEEecC
Confidence            466677788999999999999999999754

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=92.40  E-value=0.051  Score=37.07  Aligned_cols=41  Identities=17%  Similarity=0.353  Sum_probs=32.5

Q ss_pred             CCCeEEEEcCCCCCChHHH------------HHHHHHHHhCCCEEEEEeCCCC
Q 040291            2 NRPHVLVLPIPAQGHVIPL------------LEFSQCLAKQGFRVTFVNTDYD   42 (160)
Q Consensus         2 ~~~~i~~~~~p~~GH~~P~------------l~la~~L~~rGh~Vt~~~~~~~   42 (160)
                      +..+|++...|..-++.|.            ..||+++..||++||+++++..
T Consensus         5 ~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~   57 (223)
T d1u7za_           5 KHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS   57 (223)
T ss_dssp             TTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC
T ss_pred             CCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhcccc
Confidence            4567777777777766664            5899999999999999998654

>d1ep3b2 c.25.1.3 (B:103-262) Dihydroorotate dehydrogenase B, PyrK subunit {Lactococcus lactis, isozyme B [TaxId: 1358]}

class: Alpha and beta proteins (a/b)
fold: Ferredoxin reductase-like, C-terminal NADP-linked domain
superfamily: Ferredoxin reductase-like, C-terminal NADP-linked domain
family: Dihydroorotate dehydrogenase B, PyrK subunit
domain: Dihydroorotate dehydrogenase B, PyrK subunit
species: Lactococcus lactis, isozyme B [TaxId: 1358]

Probab=90.84  E-value=0.12  Score=32.94  Aligned_cols=37  Identities=27%  Similarity=0.393  Sum_probs=29.9

Q ss_pred             CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCC
Q 040291            3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDY   41 (160)
Q Consensus         3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~   41 (160)
                      +.|++++. +|.| +.|++.++++|.++|.+|+++-...
T Consensus         8 ~~kvllIA-gG~G-itPl~sm~~~l~~~~~~v~l~~g~r   44 (160)
T d1ep3b2           8 TDKILIIG-GGIG-VPPLYELAKQLEKTGCQMTILLGFA   44 (160)
T ss_dssp             TSEEEEEE-EGGG-SHHHHHHHHHHHHHTCEEEEEEEES
T ss_pred             CCEEEEEE-eeee-HHHHHHHHHHHHhccCceEEEEecC
Confidence            45677776 4455 9999999999999999999987544

>d1o6ca_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDP-N-acetylglucosamine 2-epimerase
domain: UDP-N-acetylglucosamine 2-epimerase
species: Bacillus subtilis [TaxId: 1423]

Probab=90.67  E-value=0.4  Score=34.82  Aligned_cols=115  Identities=14%  Similarity=0.144  Sum_probs=66.7

Q ss_pred             CCCeEEEEcCCCCCChHHHHHHHHHHHhC-CCEEEEEeCCCChhhHHhhhccCCCCCCCeee-eecCCCCCCCCCcccHH
Q 040291            2 NRPHVLVLPIPAQGHVIPLLEFSQCLAKQ-GFRVTFVNTDYDHKRIMESLEGKNDLGEQIRL-VSIPDGMEPWEDRNDFG   79 (160)
Q Consensus         2 ~~~~i~~~~~p~~GH~~P~l~la~~L~~r-Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~l~~~~~~~~~~~~~~   79 (160)
                      ++++|+++. +.+..+.-+.+|.++|.++ +.++.++.+....+.......     .-++.. ..+  ....  +.....
T Consensus         1 ~k~Ki~~v~-GtR~e~~kl~pli~~l~~~~~~~~~li~tG~H~~~~~~~~~-----~~~i~~~~~~--~~~~--~~~~~~   70 (377)
T d1o6ca_           1 KKLKVMTVF-GTRPEAIKMAPLVLELKKYPEIDSYVTVTAQHRQMLDQVLD-----AFHIKPDFDL--NIMK--ERQTLA   70 (377)
T ss_dssp             CCEEEEEEE-CSHHHHHHHHHHHHHGGGCTTEEEEEEECCSCGGGTHHHHH-----HTTCCCSEEC--CCCC--TTCCHH
T ss_pred             CCceEEEEE-EchHhHHHHHHHHHHHHhCCCCCEEEEEeCCCHHHHHHHHh-----hcCCCCceee--ecCC--CCCCHH
Confidence            367888887 8999999999999999987 689999888764321111000     011110 001  1111  111221


Q ss_pred             HHHHHHHHhccHHHHHHHHHHhcCCCCCccEEE--ecCCCcc-HHHHHHHhCCccEEEcc
Q 040291           80 KLFEKVLQVMPGKLEELIEDINSREDEKLDCFI--ADGYMAW-SMEVAKKMNVRGALFWP  136 (160)
Q Consensus        80 ~~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI--~D~~~~~-~~~~A~~lgiP~i~~~~  136 (160)
                      .....    +-..+.+++.+      .+||+||  .|.+... ++.+|..+|||.+.+-.
T Consensus        71 ~~~~~----~i~~~~~~~~~------~kpD~v~v~GDr~e~la~a~aa~~~~Ipi~Hieg  120 (377)
T d1o6ca_          71 EITSN----ALVRLDELFKD------IKPDIVLVHGDTTTTFAGSLAAFYHQIAVGHVEA  120 (377)
T ss_dssp             HHHHH----HHHHHHHHHHH------HCCSEEEEETTCHHHHHHHHHHHHTTCEEEEESC
T ss_pred             HHHHH----HHHhhhhhhhh------cccceeEeeecccccchhhhhhhhccceEEEEec
Confidence            11111    11234455555      4788655  6766654 56789999999999754

>d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDP-N-acetylglucosamine 2-epimerase
domain: UDP-N-acetylglucosamine 2-epimerase
species: Thermus thermophilus [TaxId: 274]

Probab=89.95  E-value=1.2  Score=32.09  Aligned_cols=113  Identities=10%  Similarity=0.090  Sum_probs=65.0

Q ss_pred             eEEEEcCCCCCChHHHHHHHHHHHh-CCCEEEEEeCCCChhhHHhhhccCCCCCCCeeeeecCCCCCCCCCcccHHHHHH
Q 040291            5 HVLVLPIPAQGHVIPLLEFSQCLAK-QGFRVTFVNTDYDHKRIMESLEGKNDLGEQIRLVSIPDGMEPWEDRNDFGKLFE   83 (160)
Q Consensus         5 ~i~~~~~p~~GH~~P~l~la~~L~~-rGh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~   83 (160)
                      +|+++. +.+..+.-+.++.++|.+ .++++.++.+....+.......     .-+++-..   .+..............
T Consensus         4 kI~~v~-GtR~e~~kl~pli~~l~~~~~~~~~li~tG~H~~~~~~~~~-----~~~i~~d~---~l~~~~~~~s~~~~~~   74 (373)
T d1v4va_           4 RVVLAF-GTRPEATKMAPVYLALRGIPGLKPLVLLTGQHREQLRQALS-----LFGIQEDR---NLDVMQERQALPDLAA   74 (373)
T ss_dssp             EEEEEE-CSHHHHHHHHHHHHHHHTSTTEEEEEEECSSCHHHHHHHHH-----TTTCCCSE---ECCCCSSCCCHHHHHH
T ss_pred             eEEEEE-EhhHHHHHHHHHHHHHHhCCCCCEEEEEccCChhhhhCcch-----hcCCCccc---cCCCCCCCCCHHHHHH
Confidence            676665 788999999999999987 4899999888766443222110     01222100   0111111112222211


Q ss_pred             HHHHhccHHHHHHHHHHhcCCCCCccEEE--ecCCCccH-HHHHHHhCCccEEEcc
Q 040291           84 KVLQVMPGKLEELIEDINSREDEKLDCFI--ADGYMAWS-MEVAKKMNVRGALFWP  136 (160)
Q Consensus        84 ~~~~~~~~~~~~ll~~l~~~~~~~~d~vI--~D~~~~~~-~~~A~~lgiP~i~~~~  136 (160)
                      .    +-..+.+++++      .+||+|+  .|.+...+ +.+|...+||.+.+-.
T Consensus        75 ~----~~~~~~~~l~~------~kPD~vlv~GDr~e~la~a~aa~~~~ipi~Hieg  120 (373)
T d1v4va_          75 R----ILPQAARALKE------MGADYVLVHGDTLTTFAVAWAAFLEGIPVGHVEA  120 (373)
T ss_dssp             H----HHHHHHHHHHH------TTCSEEEEESSCHHHHHHHHHHHHTTCCEEEETC
T ss_pred             H----HHHHHhhhhhh------cCcccccccccCccchhHHHHHHHhhhhheeecc
Confidence            1    11235556655      5788766  67776554 5567888999998754

>d1j9ja_ c.106.1.1 (A:) SurE homolog TM1662 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: SurE-like
superfamily: SurE-like
family: SurE-like
domain: SurE homolog TM1662
species: Thermotoga maritima [TaxId: 2336]

Probab=89.78  E-value=1.1  Score=30.51  Aligned_cols=25  Identities=16%  Similarity=0.297  Sum_probs=18.3

Q ss_pred             HHHHHHHHHhCCCEEEEEeCCCChhh
Q 040291           20 LLEFSQCLAKQGFRVTFVNTDYDHKR   45 (160)
Q Consensus        20 ~l~la~~L~~rGh~Vt~~~~~~~~~~   45 (160)
                      +..|+++| ++||+|+++.+...+..
T Consensus        16 l~~L~~~l-~~~~~V~vvAP~~~~S~   40 (247)
T d1j9ja_          16 IIVLAELL-SEEHEVFVVAPDKERSA   40 (247)
T ss_dssp             HHHHHHHH-TTTSEEEEEEESSCCTT
T ss_pred             HHHHHHHH-hcCCeEEEEecCCCCcC
Confidence            45666666 56899999999876543

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=88.55  E-value=0.19  Score=32.90  Aligned_cols=33  Identities=24%  Similarity=0.422  Sum_probs=26.5

Q ss_pred             CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291            3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD   40 (160)
Q Consensus         3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~   40 (160)
                      +.||+++-.+-.|     +.-|..|++|||+||++--.
T Consensus        43 ~k~V~IIGaGPAG-----L~AA~~la~~G~~Vtl~E~~   75 (179)
T d1ps9a3          43 KKNLAVVGAGPAG-----LAFAINAAARGHQVTLFDAH   75 (179)
T ss_dssp             CCEEEEECCSHHH-----HHHHHHHHTTTCEEEEEESS
T ss_pred             CcEEEEECccHHH-----HHHHHHHHhhccceEEEecc
Confidence            4678888766556     88899999999999998543

>d1pswa_ c.87.1.7 (A:) ADP-heptose LPS heptosyltransferase II {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: ADP-heptose LPS heptosyltransferase II
domain: ADP-heptose LPS heptosyltransferase II
species: Escherichia coli [TaxId: 562]

Probab=88.00  E-value=3  Score=28.89  Aligned_cols=105  Identities=11%  Similarity=0.102  Sum_probs=64.9

Q ss_pred             CeEEEEcCCCCCChHHHHHHHHHHHhC--CCEEEEEeCCCChhhHHhhhccCCCCCCCeee-eecCCCCCCCCCcccHHH
Q 040291            4 PHVLVLPIPAQGHVIPLLEFSQCLAKQ--GFRVTFVNTDYDHKRIMESLEGKNDLGEQIRL-VSIPDGMEPWEDRNDFGK   80 (160)
Q Consensus         4 ~~i~~~~~p~~GH~~P~l~la~~L~~r--Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~l~~~~~~~~~~~~~~~   80 (160)
                      |||+++-..+-|++.-+.++.++|.++  +.+|++++.+...+.+..        .+.++- ..++..  .  ...... 
T Consensus         1 MkILii~~~~iGD~il~~p~i~~Lk~~~P~~~I~~l~~~~~~~l~~~--------~p~id~v~~~~~~--~--~~~~~~-   67 (348)
T d1pswa_           1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLSR--------MPEVNEAIPMPLG--H--GALEIG-   67 (348)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHHTT--------CTTEEEEEEC-----------CHH-
T ss_pred             CeEEEEcCCChHHHHHHHHHHHHHHHHCCCCEEEEEEChhHHHHHhh--------CCCcCEEEEecCc--c--ccchhh-
Confidence            589999999999999999999999987  899999998776654322        245543 222110  0  000111 


Q ss_pred             HHHHHHHhccHHHHHHHHHHhcCCCCCccEEEecCCCccHHHHHHHhCCccEEEc
Q 040291           81 LFEKVLQVMPGKLEELIEDINSREDEKLDCFIADGYMAWSMEVAKKMNVRGALFW  135 (160)
Q Consensus        81 ~~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI~D~~~~~~~~~A~~lgiP~i~~~  135 (160)
                                 ...++.+.+..   .++|++|.-.-......++...+++....+
T Consensus        68 -----------~~~~l~~~l~~---~~~D~~i~~~~~~~~~~~~~~~~~~~~~~~  108 (348)
T d1pswa_          68 -----------ERRKLGHSLRE---KRYDRAYVLPNSFKSALVPLFAGIPHRTGW  108 (348)
T ss_dssp             -----------HHHHHHHHTTT---TTCSEEEECSCCSGGGHHHHHTTCSEEEEE
T ss_pred             -----------hhhhHHHHhhh---cccceEeecccccchhhHHHhhcccccccc
Confidence                       11234444443   589998843333334556677777776654

>d7reqa2 c.23.6.1 (A:561-728) Methylmalonyl-CoA mutase alpha subunit, C-terminal domain {Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Cobalamin (vitamin B12)-binding domain
family: Cobalamin (vitamin B12)-binding domain
domain: Methylmalonyl-CoA mutase alpha subunit, C-terminal domain
species: Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]

Probab=87.88  E-value=0.7  Score=29.75  Aligned_cols=44  Identities=20%  Similarity=0.234  Sum_probs=37.9

Q ss_pred             CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhH
Q 040291            3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRI   46 (160)
Q Consensus         3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~   46 (160)
                      +++|++.+...-+|-.--.-++..|.+.|++|.........+.+
T Consensus        37 ~pkVlla~~g~D~Hd~G~~~va~~l~~~G~eVi~lg~~~~~e~i   80 (168)
T d7reqa2          37 RPRILLAKMGQDGHDRGQKVIATAYADLGFDVDVGPLFQTPEET   80 (168)
T ss_dssp             CCEEEEECBTTCCCCHHHHHHHHHHHHTTCEEEECCTTBCHHHH
T ss_pred             CCeEEEEeCCccHHHHHHHHHHHHHHhCCcceecCCCcCcHHHH
Confidence            67999999999999999999999999999999987766554433

>d3bula2 c.23.6.1 (A:741-896) Methionine synthase, C-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Cobalamin (vitamin B12)-binding domain
family: Cobalamin (vitamin B12)-binding domain
domain: Methionine synthase, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=87.57  E-value=0.65  Score=29.46  Aligned_cols=44  Identities=9%  Similarity=0.098  Sum_probs=39.0

Q ss_pred             CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCCChhhH
Q 040291            3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDYDHKRI   46 (160)
Q Consensus         3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~~~~~~   46 (160)
                      +.+|++.+..+-.|-....-++..|..+|++|..+...-..+.+
T Consensus         6 ~gkivi~tv~gD~HdiG~~iv~~~l~~~G~~Vi~LG~~~p~e~~   49 (156)
T d3bula2           6 NGKMVIATVKGDVHDIGKNIVGVVLQCNNYEIVDLGVMVPAEKI   49 (156)
T ss_dssp             SCEEEEEEBTTCCCCHHHHHHHHHHHTTTCEEEECCSSBCHHHH
T ss_pred             CCEEEEEeeCCChhhHHHHHHHHHHHHCCCEEEECCCCCCHHHH
Confidence            56899999999999999999999999999999998887655443

>d1f6da_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: UDP-N-acetylglucosamine 2-epimerase
domain: UDP-N-acetylglucosamine 2-epimerase
species: Escherichia coli [TaxId: 562]

Probab=87.26  E-value=1.4  Score=31.84  Aligned_cols=113  Identities=13%  Similarity=0.087  Sum_probs=64.5

Q ss_pred             CeEEEEcCCCCCChHHHHHHHHHHHhC-CCEEEEEeCCCChhhHHhhhccCCCCCCCeee-eecCCCCCCCCCcccHHHH
Q 040291            4 PHVLVLPIPAQGHVIPLLEFSQCLAKQ-GFRVTFVNTDYDHKRIMESLEGKNDLGEQIRL-VSIPDGMEPWEDRNDFGKL   81 (160)
Q Consensus         4 ~~i~~~~~p~~GH~~P~l~la~~L~~r-Gh~Vt~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~l~~~~~~~~~~~~~~~~   81 (160)
                      ++|+++. +.+..+.=+.+|.++|.++ +.++.++.+....+.......     .-++.. ..+  ....  ........
T Consensus         1 MKi~~v~-GtR~e~~kl~pli~~l~~~~~~~~~li~tG~H~~~~~~~~~-----~~~~~~~~~~--~~~~--~~~~~~~~   70 (376)
T d1f6da_           1 MKVLTVF-GTRPEAIKMAPLVHALAKDPFFEAKVCVTAQHREMLDQVLK-----LFSIVPDYDL--NIMQ--PGQGLTEI   70 (376)
T ss_dssp             CEEEEEE-CSHHHHHHHHHHHHHHHHCTTCEEEEEECCTTGGGGHHHHH-----HTTCCCSEEC--CCCS--SSSCHHHH
T ss_pred             CeEEEEE-EhhHhHHHHHHHHHHHHhCCCCCEEEEEcCCCHHHHHHHHH-----hcCCCCCccc--ccCC--CCCCHHHH
Confidence            4677777 8999999999999999886 699999988765332111100     011110 001  0111  11122111


Q ss_pred             HHHHHHhccHHHHHHHHHHhcCCCCCccEEE--ecCCCccH-HHHHHHhCCccEEEcc
Q 040291           82 FEKVLQVMPGKLEELIEDINSREDEKLDCFI--ADGYMAWS-MEVAKKMNVRGALFWP  136 (160)
Q Consensus        82 ~~~~~~~~~~~~~~ll~~l~~~~~~~~d~vI--~D~~~~~~-~~~A~~lgiP~i~~~~  136 (160)
                      ....    -..+.+.+.+      .+||+|+  .|-+...+ +.+|..++||.+.+..
T Consensus        71 ~~~~----i~~~~~~~~~------~kPD~v~v~GDr~e~la~a~aa~~~~ipi~Hieg  118 (376)
T d1f6da_          71 TCRI----LEGLKPILAE------FKPDVVLVHGDTTTTLATSLAAFYQRIPVGHVEA  118 (376)
T ss_dssp             HHHH----HHHHHHHHHH------HCCSEEEEETTCHHHHHHHHHHHTTTCCEEEESC
T ss_pred             HHHH----HHhhHHHHHh------ccCcceeeeccccchhhHHHHHHhhCceEEEEec
Confidence            1111    1234455555      3678655  67766544 5578999999999765

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=86.31  E-value=0.7  Score=29.16  Aligned_cols=33  Identities=18%  Similarity=0.110  Sum_probs=24.5

Q ss_pred             CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291            4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD   40 (160)
Q Consensus         4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~   40 (160)
                      |||.++  ++.|  .-=..||+.|++.||+|++..-.
T Consensus         1 Mki~vi--gGaG--~iG~alA~~la~~G~~V~l~~R~   33 (212)
T d1jaya_           1 MRVALL--GGTG--NLGKGLALRLATLGHEIVVGSRR   33 (212)
T ss_dssp             CEEEEE--TTTS--HHHHHHHHHHHTTTCEEEEEESS
T ss_pred             CEEEEE--eCCc--HHHHHHHHHHHHCCCEEEEEECC
Confidence            467776  2334  35578999999999999998644

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=86.28  E-value=0.35  Score=30.29  Aligned_cols=23  Identities=26%  Similarity=0.212  Sum_probs=20.2

Q ss_pred             HHHHHHHHHHhCCCEEEEEeCCC
Q 040291           19 PLLEFSQCLAKQGFRVTFVNTDY   41 (160)
Q Consensus        19 P~l~la~~L~~rGh~Vt~~~~~~   41 (160)
                      .-+++|..|+++|++||++....
T Consensus        52 ig~e~A~~la~~G~~Vtlv~~~~   74 (156)
T d1djqa2          52 MAPSLAEKLATAGHEVTIVSGVH   74 (156)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESSC
T ss_pred             HHHHHHHHHHHcCCeEEEEecCC
Confidence            45699999999999999998765

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=84.74  E-value=0.68  Score=26.78  Aligned_cols=31  Identities=13%  Similarity=0.327  Sum_probs=26.3

Q ss_pred             CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEE
Q 040291            3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFV   37 (160)
Q Consensus         3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~   37 (160)
                      ..||-|+-..+.|    |..||+.|.++|++||-.
T Consensus         8 ~~~ihfiGigG~G----Ms~LA~~L~~~G~~VsGS   38 (96)
T d1p3da1           8 VQQIHFIGIGGAG----MSGIAEILLNEGYQISGS   38 (96)
T ss_dssp             CCEEEEETTTSTT----HHHHHHHHHHHTCEEEEE
T ss_pred             CCEEEEEEECHHH----HHHHHHHHHhCCCEEEEE
Confidence            3678888888888    678999999999999964

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=84.37  E-value=0.46  Score=31.49  Aligned_cols=32  Identities=28%  Similarity=0.430  Sum_probs=25.8

Q ss_pred             CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeC
Q 040291            3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNT   39 (160)
Q Consensus         3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~   39 (160)
                      +.||+|+-.+..|     +..|..|++||++||++--
T Consensus         6 ~~kVvVIGaGiaG-----l~~A~~L~~~G~~V~vier   37 (268)
T d1c0pa1           6 QKRVVVLGSGVIG-----LSSALILARKGYSVHILAR   37 (268)
T ss_dssp             SCEEEEECCSHHH-----HHHHHHHHHTTCEEEEEES
T ss_pred             CCcEEEECccHHH-----HHHHHHHHHCCCCEEEEeC
Confidence            4678888766666     6788899999999999863

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=83.09  E-value=0.73  Score=26.32  Aligned_cols=30  Identities=13%  Similarity=0.008  Sum_probs=23.4

Q ss_pred             CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEE
Q 040291            4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFV   37 (160)
Q Consensus         4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~   37 (160)
                      +||-|+-..+.|    |..||+.|.++|++|+-.
T Consensus         2 ~~ihfiGIgG~G----Ms~LA~~L~~~G~~VsGS   31 (89)
T d1j6ua1           2 MKIHFVGIGGIG----MSAVALHEFSNGNDVYGS   31 (89)
T ss_dssp             CEEEEETTTSHH----HHHHHHHHHHTTCEEEEE
T ss_pred             cEEEEEeECHHH----HHHHHHHHHhCCCeEEEE
Confidence            456666666655    778999999999999974

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=82.78  E-value=0.51  Score=29.47  Aligned_cols=33  Identities=27%  Similarity=0.121  Sum_probs=24.6

Q ss_pred             CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCC
Q 040291            4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDY   41 (160)
Q Consensus         4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~   41 (160)
                      |||+++-.+..|     ..+|..|++.||+||++.-..
T Consensus         1 MkI~IiGaG~iG-----~~~a~~L~~~G~~V~~~~r~~   33 (167)
T d1ks9a2           1 MKITVLGCGALG-----QLWLTALCKQGHEVQGWLRVP   33 (167)
T ss_dssp             CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSSC
T ss_pred             CEEEEECcCHHH-----HHHHHHHHHCCCceEEEEcCH
Confidence            467777555444     348999999999999987654

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=82.26  E-value=0.66  Score=27.56  Aligned_cols=33  Identities=15%  Similarity=0.147  Sum_probs=25.6

Q ss_pred             CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCC
Q 040291            4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDY   41 (160)
Q Consensus         4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~   41 (160)
                      .|++++-.+.-|     +++|..|+++|++||++-..+
T Consensus        22 ~~vvIiGgG~ig-----~E~A~~l~~~G~~Vtlve~~~   54 (116)
T d1gesa2          22 ERVAVVGAGYIG-----VELGGVINGLGAKTHLFEMFD   54 (116)
T ss_dssp             SEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSSS
T ss_pred             CEEEEECCChhh-----HHHHHHhhccccEEEEEeecc
Confidence            467776655545     899999999999999986543

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=81.93  E-value=1  Score=28.10  Aligned_cols=34  Identities=26%  Similarity=0.323  Sum_probs=24.2

Q ss_pred             CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCCC
Q 040291            3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTDY   41 (160)
Q Consensus         3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~   41 (160)
                      ..+|+++-.   |.+-.  .+|+.|+++||+||++.-..
T Consensus         2 ~K~IliiGa---G~~G~--~~a~~L~~~g~~V~v~dr~~   35 (182)
T d1e5qa1           2 TKSVLMLGS---GFVTR--PTLDVLTDSGIKVTVACRTL   35 (182)
T ss_dssp             CCEEEEECC---STTHH--HHHHHHHTTTCEEEEEESCH
T ss_pred             CCEEEEECC---CHHHH--HHHHHHHhCCCEEEEEECCh
Confidence            457777643   54433  36899999999999877543

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.78  E-value=0.56  Score=32.03  Aligned_cols=31  Identities=23%  Similarity=0.372  Sum_probs=25.2

Q ss_pred             CCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEe
Q 040291            3 RPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVN   38 (160)
Q Consensus         3 ~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~   38 (160)
                      +.||+|+-.+..|     +.-|.+|+++|++|+++=
T Consensus         5 ~~kViVIGaG~aG-----L~aA~~L~~~G~~V~VlE   35 (449)
T d2dw4a2           5 TGKVIIIGSGVSG-----LAAARQLQSFGMDVTLLE   35 (449)
T ss_dssp             CCEEEEECCBHHH-----HHHHHHHHHTTCEEEEEC
T ss_pred             CCcEEEECCCHHH-----HHHHHHHHhCCCCEEEEe
Confidence            4678888777666     777889999999999973

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.49  E-value=0.81  Score=29.77  Aligned_cols=35  Identities=17%  Similarity=0.236  Sum_probs=25.8

Q ss_pred             CCCCeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeC
Q 040291            1 MNRPHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNT   39 (160)
Q Consensus         1 m~~~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~   39 (160)
                      |...||+++-.  .|-+-  ..++++|.++||+|+.++-
T Consensus         1 m~~kkIlV~Ga--tG~iG--~~v~~~Ll~~g~~V~~~~R   35 (205)
T d1hdoa_           1 MAVKKIAIFGA--TGQTG--LTTLAQAVQAGYEVTVLVR   35 (205)
T ss_dssp             CCCCEEEEEST--TSHHH--HHHHHHHHHTTCEEEEEES
T ss_pred             CCCCEEEEECC--CCHHH--HHHHHHHHHCcCEEEEEEc
Confidence            78888887653  33221  4678899999999999874

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=81.19  E-value=0.91  Score=29.38  Aligned_cols=34  Identities=15%  Similarity=0.171  Sum_probs=29.0

Q ss_pred             CeEEEEcCC-CCCChHHHHHHHHHHHhCCCEEEEE
Q 040291            4 PHVLVLPIP-AQGHVIPLLEFSQCLAKQGFRVTFV   37 (160)
Q Consensus         4 ~~i~~~~~p-~~GH~~P~l~la~~L~~rGh~Vt~~   37 (160)
                      +|+.+.... |-|=..-...||++|+++|++|.++
T Consensus         2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~i   36 (224)
T d1byia_           2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGY   36 (224)
T ss_dssp             EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEE
Confidence            356666664 8899999999999999999999987

>d1tqha_ c.69.1.29 (A:) Carboxylesterase Est {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Carboxylesterase/lipase
domain: Carboxylesterase Est
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=81.01  E-value=1.4  Score=27.79  Aligned_cols=36  Identities=11%  Similarity=0.135  Sum_probs=28.3

Q ss_pred             eEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeCC
Q 040291            5 HVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNTD   40 (160)
Q Consensus         5 ~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~   40 (160)
                      +-+++-.+..|+-.-+..+++.|+++|++|..+--+
T Consensus        12 ~~vvliHG~~~~~~~~~~l~~~L~~~G~~v~~~D~~   47 (242)
T d1tqha_          12 RAVLLLHGFTGNSADVRMLGRFLESKGYTCHAPIYK   47 (242)
T ss_dssp             CEEEEECCTTCCTHHHHHHHHHHHHTTCEEEECCCT
T ss_pred             CeEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEeCC
Confidence            334445777888888999999999999999876543

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=80.65  E-value=0.7  Score=29.05  Aligned_cols=31  Identities=16%  Similarity=0.168  Sum_probs=22.9

Q ss_pred             CeEEEEcCCCCCChHHHHHHHHHHHhCCCEEEEEeC
Q 040291            4 PHVLVLPIPAQGHVIPLLEFSQCLAKQGFRVTFVNT   39 (160)
Q Consensus         4 ~~i~~~~~p~~GH~~P~l~la~~L~~rGh~Vt~~~~   39 (160)
                      +||+++-.+..|     ..+|+.|++.||+|+.+..
T Consensus         1 MkI~iIG~G~mG-----~~lA~~l~~~g~~V~~~d~   31 (165)
T d2f1ka2           1 MKIGVVGLGLIG-----ASLAGDLRRRGHYLIGVSR   31 (165)
T ss_dssp             CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred             CEEEEEeecHHH-----HHHHHHHHHCCCEEEEEEC
Confidence            478888544444     3578999999999997643

>d1qzua_ c.34.1.1 (A:) 4'-phosphopantothenoylcysteine decarboxylase (PPC decarboxylase, halotolerance protein Hal3a) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
superfamily: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
family: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
domain: 4'-phosphopantothenoylcysteine decarboxylase (PPC decarboxylase, halotolerance protein Hal3a)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.58  E-value=1.4  Score=28.67  Aligned_cols=45  Identities=27%  Similarity=0.234  Sum_probs=32.0

Q ss_pred             CCC-CeEEEEcCCCCCChHHHHHHHHHHHh-CCCEEEEEeCCCChhhH
Q 040291            1 MNR-PHVLVLPIPAQGHVIPLLEFSQCLAK-QGFRVTFVNTDYDHKRI   46 (160)
Q Consensus         1 m~~-~~i~~~~~p~~GH~~P~l~la~~L~~-rGh~Vt~~~~~~~~~~~   46 (160)
                      |.+ .||++.-.++-+=+. ...+.++|.+ .|++|.++.|++..+.+
T Consensus         1 m~~k~~Ill~vtGSIAayk-~~~lv~~L~~~~g~~V~vi~T~~A~~Fv   47 (181)
T d1qzua_           1 MERKFHVLVGVTGSVAALK-LPLLVSKLLDIPGLEVAVVTTERAKHFY   47 (181)
T ss_dssp             CCSSEEEEEEECSSGGGGT-HHHHHHHHC---CEEEEEEECTGGGGSS
T ss_pred             CCCCCEEEEEEecHHHHHH-HHHHHHHHHHHcCCEEEEEEChHHHhhc
Confidence            654 478888777665554 5678888887 49999999998765443

>d1uxoa_ c.69.1.31 (A:) Hypothetical protein YdeN {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: YdeN-like
domain: Hypothetical protein YdeN
species: Bacillus subtilis [TaxId: 1423]

Probab=80.40  E-value=1.4  Score=27.55  Aligned_cols=38  Identities=13%  Similarity=0.114  Sum_probs=26.7

Q ss_pred             CeEEEEc-CCCCCChHHHHHHHHHHHhCCCEEEEEeCCC
Q 040291            4 PHVLVLP-IPAQGHVIPLLEFSQCLAKQGFRVTFVNTDY   41 (160)
Q Consensus         4 ~~i~~~~-~p~~GH~~P~l~la~~L~~rGh~Vt~~~~~~   41 (160)
                      ++|+++- +.+.++-+.+..++++|+++|++|...--+.
T Consensus         2 k~V~~vHG~~~~~~~~~~~~l~~~L~~~G~~v~~~d~p~   40 (186)
T d1uxoa_           2 KQVYIIHGYRASSTNHWFPWLKKRLLADGVQADILNMPN   40 (186)
T ss_dssp             CEEEEECCTTCCTTSTTHHHHHHHHHHTTCEEEEECCSC
T ss_pred             CEEEEECCCCCCcchhHHHHHHHHHHhCCCEEEEeccCC
Confidence            4666666 3333444457788999999999998875443

>d1krwa_ c.23.1.1 (A:) NTRC receiver domain {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: NTRC receiver domain
species: Salmonella typhimurium [TaxId: 90371]

Probab=80.39  E-value=1.5  Score=26.17  Aligned_cols=41  Identities=17%  Similarity=0.246  Sum_probs=25.8

Q ss_pred             HHHHHHhcCCCCCccEEEecCCCcc--HHHHHHHh-----CCccEEEccch
Q 040291           95 ELIEDINSREDEKLDCFIADGYMAW--SMEVAKKM-----NVRGALFWPSS  138 (160)
Q Consensus        95 ~ll~~l~~~~~~~~d~vI~D~~~~~--~~~~A~~l-----giP~i~~~~~~  138 (160)
                      +.++.+.+   .+||+||.|...+.  +..+.+++     ++|.|.+....
T Consensus        38 ~a~~~l~~---~~~dlii~D~~mp~~~G~el~~~l~~~~~~~piI~~t~~~   85 (123)
T d1krwa_          38 EVLAALAS---KTPDVLLSDIRMPGMDGLALLKQIKQRHPMLPVIIMTAHS   85 (123)
T ss_dssp             HHHHHHTT---CCCSEEEECCSSSSSTTHHHHHHHHHHSSSCCEEESCCCS
T ss_pred             HHHHHHHh---CCCCEEEehhhcCCchHHHHHHHHHHhCCCCeEEEEecCC
Confidence            34444433   58999999988764  44444333     58877765543