Citrus Sinensis ID: 040402

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------
IWSCHRPLDSLSPAEFTLVQTIVKTSYPSNNLSFHYVGLDEPDKAVVYSWLSNSKIKIPRRAIVIDLSRRSIVSDKVYTGHGFPLLTLEEQRTGAAPVLAYEPFKASVKKRGLNISDVESKRELKFPCFYTDQGTVNMFLRPIEGITIVVDIEEMKVTQYNDREVAPIPKSEPTEYRWSKLKPPFGPRLNSVTTLPTGPGFKIDGNTVKWANWVFNVGFDARVGTIISTASIYDVDMHKYRRPLKDCPPNAVFIDGYFTSQDGAPIQTPNAICIFERHTGDVMWRHTEAEMPGDVREVRPEVSLVVRMVATVGNYDYVIDWEFKPSGSIKLGCKVRPVEYTHIDQIKEDQQGKLVADNTIGVNHDHFLNYYLDLDIDGYANSFEKTKLTVEKETAKTEFEARLKLDTKPMEFAMVNPNKKTKIGHPVGYRLLPGLVVGPLLTDDDYPQIRAGFTDYNIWVTPYNKSEKYSGGNYVDQSHGDDTLLQWTDGNREIENKDIVLWYTMGIHHAPCQEDFPVMPTVSGGFELRPTNFFEYNPVLKVIPPKHVQWPNCTGKHQPVSTLNIWW
ccccccccccccHHHHHHHHHHHHHccccccEEEEEEEcccccHHHHHccccccccccccEEEEEEcccccEEEEEEEcccccccccHHHHHHHHHHHcccHHHHHHHHHccccccccccccEEEEEEEEEEcccccccccccccEEEEEEccccEEEEEEccccccccccccccccccccccccccccccccccccccEEEEEccEEEEcccEEEEEEcccccEEEEEEEEEccccccccccccccccccEEEEEEEEcccccEEEEcccEEEEEEcccccEEEEccccccccEEEEEEcEEEEEEEEEEEcccccEEEEEEEccEEEEEEEEEEEEEEEEEccccccccccccccccEEccccEEEEEEEccccccccccEEEEEEEEEEcccccHHHHHccccccccEEEEEcccccccccccEEEEEccccccccccccccHHHHccccccccEEEEEcccccccccccccccccccccHHHHcccccccccccEEEEEEEEEEEccccccccccccEEEEEEEEccccccccccccccccccccccccccccccccccEEEc
ccccccccccccHHHHHHHHHHHHHccccccEEEEEEEEccccHHHHHHHccccccccccEEEEEEccccEEEEEEEcccccEccccHHHHHHHccHHHHcHHHHHHHHHccccHHHEcccEEEEEEEEEEccccccHHHcEcccEEEEEEccccEEEEEEEcccccccccccccccHHHcccccccccccEEEccccccEEEEccEEEEccEEEEEEEEcccEEEEEEEEEEEccccEEEEEcccEccccEEEEEEEEcccccEEEEEEEEEEEEEEcccEEEEEccccccccEEEEEEEEEEEEEEEEEEcEEEEcccccEEEEEEEEEcccEEEcccccHHHccccccEEEEEccEEEEcEEEEEEEEEEEcccccEcccccEEEEEEEEEccEHHHHcEccccccEEEEEEEEEEEcccccEEEEEEEcccccccccccccHHHHHcHHHHccEEEEEcccccccccccccEcccccccHHHHHHHccEcccEEEEEEEEEEEEEcccHHHccccccEEEEcEEEEccccccccccccccccEccccccccccccccccEEcc
iwschrpldslspaeFTLVQTIVKtsypsnnlsfhyvgldepdkAVVYSWLSnskikiprrAIVIDLsrrsivsdkvytghgfplltleeqrtgaapvlayepfkasvkkrglnisdveskrelkfpcfytdqgtvnmflrpieGITIVVDIEEMkvtqyndrevapipksepteyrwsklkppfgprlnsvttlptgpgfkidgntvkWANWVFNVGFDARVGTIISTasiydvdmhkyrrplkdcppnavfidgyftsqdgapiqtpnaICIFErhtgdvmwrhteaempgdvrevrpEVSLVVRMVATVgnydyvidwefkpsgsiklgckvrpveythidqikedqqgklvadntigvnhdhFLNYYLDLDIDGYANSFEKTKLTVEKETAKTEFEARLkldtkpmefamvnpnkktkighpvgyrllpglvvgplltdddypqiragftdyniwvtpynksekysggnyvdqshgddtllqwtdgnreienKDIVLWYTMgihhapcqedfpvmptvsggfelrptnffeynpvlkvippkhvqwpnctgkhqpvstlniww
iwschrpldslspaEFTLVQTIVKTSYPSNNLSFHYVGLDEPDKAVVYSWLsnskikiprraividlsrrsivsdkvyTGHGFPLLTLEEQRTGAAPVLAyepfkasvkkrglnisdveskrelkfpcfytdqgtvnmflrPIEGITIVVDIEEMKVtqyndrevapipksepteyrwsklkppfgprlnsvTTLPTGPGFKIDGNTVKWANWVFNVGFDARVGTIISTASIYDVDMHKYRRPLKDCPPNAVFIDGYFTSQDGAPIQTPNAICIFERHTGDVMWRHTEaempgdvrevrpEVSLVVRMVATVGNYDYVIDWEFKPSGSIKLGCKVRPVEYTHidqikedqqgkLVADNTIGVNHDHFLNYYLDLDIDGYANSFEKTKltveketaktefearlkldtkpmefamvnpnkktkighpVGYRLLPGLVVGPLLTDDDYPQIRAGFTDYNIWVTPYNKSEKYSGGNYVDQSHGDDTLLQWTDGNREIENKDIVLWYTMGIHHAPCQEDFPVMPTVSGGFELRPTNFFEYNPVLKVippkhvqwpnctgkhqpvstlniww
IWSCHRPLDSLSPAEFTLVQTIVKTSYPSNNLSFHYVGLDEPDKAVVYSWLSNSKIKIPRRAIVIDLSRRSIVSDKVYTGHGFPLLTLEEQRTGAAPVLAYEPFKASVKKRGLNISDVESKRELKFPCFYTDQGTVNMFLRPIEGITIVVDIEEMKVTQYNDREVAPIPKSEPTEYRWSKLKPPFGPRLNSVTTLPTGPGFKIDGNTVKWANWVFNVGFDARVGTIISTASIYDVDMHKYRRPLKDCPPNAVFIDGYFTSQDGAPIQTPNAICIFERHTGDVMWRHTEAEMPGDVREVRPEVSLVVRMVATVGNYDYVIDWEFKPSGSIKLGCKVRPVEYTHIDQIKEDQQGKLVADNTIGVNHDHFLNYYLDLDIDGYANSFEKTKLTVEKETAKTEFEARLKLDTKPMEFAMVNPNKKTKIGHpvgyrllpglvvgpllTDDDYPQIRAGFTDYNIWVTPYNKSEKYSGGNYVDQSHGDDTLLQWTDGNREIENKDIVLWYTMGIHHAPCQEDFPVMPTVSGGFELRPTNFFEYNPVLKVIPPKHVQWPNCTGKHQPVSTLNIWW
*************AEFTLVQTIVKTSYPSNNLSFHYVGLDEPDKAVVYSWLSNSKIKIPRRAIVIDLSRRSIVSDKVYTGHGFPLLTLEEQRTGAAPVLAYEPFKASVKKRGLNISDVESKRELKFPCFYTDQGTVNMFLRPIEGITIVVDIEEMKVTQYND***************W******FGPRLNSVTTLPTGPGFKIDGNTVKWANWVFNVGFDARVGTIISTASIYDVDMHKYRRPLKDCPPNAVFIDGYFTSQDGAPIQTPNAICIFERHTGDVMWRHTEAEMPGDVREVRPEVSLVVRMVATVGNYDYVIDWEFKPSGSIKLGCKVRPVEYTHIDQIKEDQQGKLVADNTIGVNHDHFLNYYLDLDIDGYANSFEKTKLTVE***********L*******EFAMVNPNKKTKIGHPVGYRLLPGLVVGPLLTDDDYPQIRAGFTDYNIWVTPYNKSEKYSGGNYVDQSHGDDTLLQWTDGNREIENKDIVLWYTMGIHHAPCQEDFPVMPTVSGGFELRPTNFFEYNPVLKVIPPKHVQWPNCTGKHQPVSTLNIW*
*WSCHRPLDSLSPAEFTLVQTIVKTSYPSNNLSFHYVGLDEPDKAVVYSWLSNSKIKIPRRAIVIDLSRRSIVSDKVYTGHGFPLLTLEEQRTGAAPVLAYEPFKASVKKRGLNISDVESKRELKFPCFYTDQGTVNMFLRPIEGITIVVDIEEMKVTQYNDREVAPIPKSEPT*************************GFKIDGNTVKWANWVFNVGFDARVGTIISTASIYDVDMHKYRRPLKDCPPNAVFIDGYFTSQDGAPIQTPNAICIFERHTGDVMWRHTEAEMPGDVREVRPEVSLVVRMVATVGNYDYVIDWEFKPSGSIKLGCKVRPVEYTHIDQIKEDQQGKLVADNTIGVNHDHFLNYYLDLDIDGYANSFEKTKLTVEKETAKTEFEARLKLDTKPMEFAMVNPNKKTKIGHPVGYRLLPGLVVGPLLT**DYPQIRAGFTDYNIWVTPYNKSEKYSGGNYVDQSHGDDTLLQWTDGNREIENKDIVLWYTMGIHHAPCQEDFPVMPTVSGGFELRPTNFFEYNPVLKVIP**************PVSTLNIWW
IWSCHRPLDSLSPAEFTLVQTIVKTSYPSNNLSFHYVGLDEPDKAVVYSWLSNSKIKIPRRAIVIDLSRRSIVSDKVYTGHGFPLLTLEEQRTGAAPVLAYEPFKASVKKRGLNISDVESKRELKFPCFYTDQGTVNMFLRPIEGITIVVDIEEMKVTQYNDREVAPIPKSEPTEYRWSKLKPPFGPRLNSVTTLPTGPGFKIDGNTVKWANWVFNVGFDARVGTIISTASIYDVDMHKYRRPLKDCPPNAVFIDGYFTSQDGAPIQTPNAICIFERHTGDVMWRHTEAEMPGDVREVRPEVSLVVRMVATVGNYDYVIDWEFKPSGSIKLGCKVRPVEYTHIDQIKEDQQGKLVADNTIGVNHDHFLNYYLDLDIDGYANSFEKTKLTVEKETAKTEFEARLKLDTKPMEFAMVNPNKKTKIGHPVGYRLLPGLVVGPLLTDDDYPQIRAGFTDYNIWVTPYNKSEKYSGGNYVDQSHGDDTLLQWTDGNREIENKDIVLWYTMGIHHAPCQEDFPVMPTVSGGFELRPTNFFEYNPVLKVIPPKHVQWPNCTGKHQPVSTLNIWW
****HRPLDSLSPAEFTLVQTIVKTSYPSNNLSFHYVGLDEPDKAVVYSWLSNSKIKIPRRAIVIDLSRRSIVSDKVYTGHGFPLLTLEEQRTGAAPVLAYEPFKASVKKRGLNISDVESKRELKFPCFYTDQGTVNMFLRPIEGITIVVDIEEMKVTQYNDREVAPIPKSEPTEYRWSKLKPPFGPRLNSVTTLPTGPGFKIDGNTVKWANWVFNVGFDARVGTIISTASIYDVDMHKYRRPLKDCPPNAVFIDGYFTSQDGAPIQTPNAICIFERHTGDVMWRHTEAEMPGDVREVRPEVSLVVRMVATVGNYDYVIDWEFKPSGSIKLGCKVRPVEYTHIDQIKEDQQGKLVADNTIGVNHDHFLNYYLDLDIDGYANSFEKTKLTVEKETAKTEFEARLKLDTKPMEFAMVNPNKKTKIGHPVGYRLLPGLVVGPLLTDDDYPQIRAGFTDYNIWVTPYNKSEKYSGGNYVDQSHGDDTLLQWTDGNREIENKDIVLWYTMGIHHAPCQEDFPVMPTVSGGFELRPTNFFEYNPVLKVIPPKHVQWPNCTG*****STL**WW
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
IWSCHRPLDSLSPAEFTLVQTIVKTSYPSNNLSFHYVGLDEPDKAVVYSWLSNSKIKIPRRAIVIDLSRRSIVSDKVYTGHGFPLLTLEEQRTGAAPVLAYEPFKASVKKRGLNISDVESKRELKFPCFYTDQGTVNMFLRPIEGITIVVDIEEMKVTQYNDREVAPIPKSEPTEYRWSKLKPPFGPRLNSVTTLPTGPGFKIDGNTVKWANWVFNVGFDARVGTIISTASIYDVDMHKYRRPLKDCPPNAVFIDGYFTSQDGAPIQTPNAICIFERHTGDVMWRHTEAEMPGDVREVRPEVSLVVRMVATVGNYDYVIDWEFKPSGSIKLGCKVRPVEYTHIDQIKEDQQGKLVADNTIGVNHDHFLNYYLDLDIDGYANSFEKTKLTVEKETAKTEFEARLKLDTKPMEFAMVNPNKKTKIGHPVGYRLLPGLVVGPLLTDDDYPQIRAGFTDYNIWVTPYNKSEKYSGGNYVDQSHGDDTLLQWTDGNREIENKDIVLWYTMGIHHAPCQEDFPVMPTVSGGFELRPTNFFEYNPVLKVIPPKHVQWPNCTGKHQPVSTLNIWW
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query567 2.2.26 [Sep-21-2011]
Q43077674 Primary amine oxidase OS= N/A no 0.968 0.814 0.472 1e-167
P49252667 Primary amine oxidase (Fr N/A no 0.968 0.823 0.474 1e-166
Q8H1H9712 Primary amine oxidase OS= no no 0.966 0.769 0.406 1e-131
P46883757 Primary amine oxidase OS= N/A no 0.927 0.694 0.285 2e-58
P49250755 Primary amine oxidase OS= yes no 0.924 0.694 0.291 1e-57
P80695752 Primary amine oxidase OS= yes no 0.924 0.696 0.280 7e-54
Q59118684 Histamine oxidase OS=Arth N/A no 0.941 0.780 0.275 2e-50
Q07123648 Copper methylamine oxidas N/A no 0.924 0.808 0.272 5e-48
Q07121648 Primary amine oxidase OS= N/A no 0.924 0.808 0.272 5e-48
P46881638 Phenylethylamine oxidase N/A no 0.938 0.833 0.254 6e-41
>sp|Q43077|AMO_PEA Primary amine oxidase OS=Pisum sativum PE=1 SV=1 Back     alignment and function desciption
 Score =  589 bits (1518), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 305/645 (47%), Positives = 407/645 (63%), Gaps = 96/645 (14%)

Query: 4   CHRPLDSLSPAEFTLVQTIVKTSYP--SNNLSFHYVGLDEPDKAVVYSWLSN-SKIKIPR 60
              PLD L+  EF  VQTIV+  YP  +N L+FHY+GLD+P+K  V  + ++ + + IPR
Sbjct: 31  VQHPLDPLTKEEFLAVQTIVQNKYPISNNRLAFHYIGLDDPEKDHVLRYETHPTLVSIPR 90

Query: 61  R------------AIVIDLSRRSIVSDKVYTGHGFPLLTLEEQRTGAAPVLAYEPFKASV 108
           +             I+I+L  RSIVSD ++ G+GFP+L+++EQ       L Y PF  SV
Sbjct: 91  KIFVVAIINSQTHEILINLRIRSIVSDNIHNGYGFPILSVDEQSLAIKLPLKYPPFIDSV 150

Query: 109 KKRGLNISDV-------------ESKRELKFPCFYTDQGTVNMFLRPIEGITIVVDIEEM 155
           KKRGLN+S++             ++ R ++  CF   + TVN+++RPI GITIV D++ M
Sbjct: 151 KKRGLNLSEIVCSSFTMGWFGEEKNVRTVRLDCF-MKESTVNIYVRPITGITIVADLDLM 209

Query: 156 KVTQYNDREVAPIPKSEPTEYRWSKLKPPFGPRLNSVTT-LPTGPGFKIDGNTVKWANWV 214
           K+ +Y+DR++  +P +E TEY+ SK  PPFGP+ +S+T+  P GPGF+I+G++V WANW 
Sbjct: 210 KIVEYHDRDIEAVPTAENTEYQVSKQSPPFGPKQHSLTSHQPQGPGFQINGHSVSWANWK 269

Query: 215 FNVGFDARVGTIISTASIYDVDMHKYRR-------------------------------- 242
           F++GFD R G +IS ASIYD++ HK RR                                
Sbjct: 270 FHIGFDVRAGIVISLASIYDLEKHKSRRVLYKGYISELFVPYQDPTEEFYFKTFFDSGEF 329

Query: 243 ----------PLKDCPPNAVFIDGYFTSQDGAPIQTPNAICIFERHTGDVMWRHTEAEMP 292
                     P +DCPP+A FID Y  S +G PI   NAIC+FE++ G++MWRHTE  +P
Sbjct: 330 GFGLSTVSLIPNRDCPPHAQFIDTYVHSANGTPILLKNAICVFEQY-GNIMWRHTENGIP 388

Query: 293 GD-VREVRPEVSLVVRMVATVGNYDYVIDWEFKPSGSIKLG------CKVRPVEYTHIDQ 345
            + + E R EV+L+VR + TVGNYD VIDWEFK SGSIK         +++     H D+
Sbjct: 389 NESIEESRTEVNLIVRTIVTVGNYDNVIDWEFKASGSIKPSIALSGILEIKGTNIKHKDE 448

Query: 346 IKEDQQGKLVADNTIGVNHDHFLNYYLDLDIDGYANSFEKTKL----------------T 389
           IKED  GKLV+ N+IG+ HDHF  YYLD DIDG  NSFEKT L                T
Sbjct: 449 IKEDLHGKLVSANSIGIYHDHFYIYYLDFDIDGTHNSFEKTSLKTVRIKDGSSKRKSYWT 508

Query: 390 VEKETAKTEFEARLKLDTKPMEFAMVNPNKKTKIGHPVGYRLLPGLVVGPLLTDDDYPQI 449
            E +TAKTE +A++ +   P E  +VNPN KT +G+ VGYRL+P +   PLLT+DDYPQI
Sbjct: 509 TETQTAKTESDAKITIGLAPAELVVVNPNIKTAVGNEVGYRLIPAIPAHPLLTEDDYPQI 568

Query: 450 RAGFTDYNIWVTPYNKSEKYSGGNYVDQSHGDDTLLQWTDGNREIENKDIVLWYTMGIHH 509
           R  FT+YN+WVT YN++EK++GG YVD S GDDTL  WT  NREI NKDIV+W+ +GIHH
Sbjct: 569 RGAFTNYNVWVTAYNRTEKWAGGLYVDHSRGDDTLAVWTKQNREIVNKDIVMWHVVGIHH 628

Query: 510 APCQEDFPVMPTVSGGFELRPTNFFEYNPVLKVIPPKHVQWPNCT 554
            P QEDFP+MP +S  FELRPTNFFE NPVLK + P+ V WP C+
Sbjct: 629 VPAQEDFPIMPLLSTSFELRPTNFFERNPVLKTLSPRDVAWPGCS 673

Pisum sativum (taxid: 3888)
EC: 1EC: .EC: 4EC: .EC: 3EC: .EC: 2EC: 1
>sp|P49252|AMO_LENCU Primary amine oxidase (Fragment) OS=Lens culinaris PE=1 SV=3 Back     alignment and function description
>sp|Q8H1H9|AMO_ARATH Primary amine oxidase OS=Arabidopsis thaliana GN=At1g62810 PE=2 SV=1 Back     alignment and function description
>sp|P46883|AMO_ECOLI Primary amine oxidase OS=Escherichia coli (strain K12) GN=tynA PE=1 SV=1 Back     alignment and function description
>sp|P49250|AMO_ENTAE Primary amine oxidase OS=Enterobacter aerogenes GN=maoA PE=1 SV=1 Back     alignment and function description
>sp|P80695|AMO_KLEOK Primary amine oxidase OS=Klebsiella oxytoca (strain ATCC 8724 / DSM 4798 / JCM 20051 / NBRC 3318 / NRRL B-199 / KCTC 1686) GN=maoA PE=1 SV=2 Back     alignment and function description
>sp|Q59118|AMOH_ARTGO Histamine oxidase OS=Arthrobacter globiformis PE=1 SV=3 Back     alignment and function description
>sp|Q07123|AMO2_ARTS1 Copper methylamine oxidase OS=Arthrobacter sp. (strain P1) GN=maoII PE=1 SV=1 Back     alignment and function description
>sp|Q07121|AMO1_ARTS1 Primary amine oxidase OS=Arthrobacter sp. (strain P1) GN=maoI PE=1 SV=1 Back     alignment and function description
>sp|P46881|PAOX_ARTGO Phenylethylamine oxidase OS=Arthrobacter globiformis PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query567
225432636 674 PREDICTED: primary amine oxidase [Vitis 0.975 0.820 0.570 0.0
147806124654 hypothetical protein VITISV_012123 [Viti 0.971 0.842 0.564 0.0
225432632667 PREDICTED: primary amine oxidase [Vitis 0.971 0.826 0.543 0.0
147794975644 hypothetical protein VITISV_029120 [Viti 0.924 0.813 0.546 0.0
356574406 677 PREDICTED: primary amine oxidase-like [G 0.977 0.818 0.530 0.0
357444253 675 Primary amine oxidase [Medicago truncatu 0.971 0.816 0.526 0.0
356574404 1162 PREDICTED: primary amine oxidase-like [G 0.971 0.474 0.521 0.0
356575837 675 PREDICTED: primary amine oxidase-like [G 0.971 0.816 0.532 0.0
225432644 676 PREDICTED: primary amine oxidase [Vitis 0.962 0.807 0.525 0.0
147832635 1265 hypothetical protein VITISV_040530 [Viti 0.961 0.430 0.518 0.0
>gi|225432636|ref|XP_002278244.1| PREDICTED: primary amine oxidase [Vitis vinifera] gi|297737034|emb|CBI26235.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  720 bits (1859), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/650 (57%), Positives = 447/650 (68%), Gaps = 97/650 (14%)

Query: 3   SCHRPLDSLSPAEFTLVQTIVKTSYP--SNNLSFHYVGLDEPDKAVVYSWLSN---SKIK 57
           S H PLDSL+P+EF  VQ IV  S P  S+N++F YVGLDEPDK  + SWLSN   + + 
Sbjct: 25  SHHHPLDSLTPSEFRQVQAIVNGSNPGSSHNVTFQYVGLDEPDKPALLSWLSNPNSTTLP 84

Query: 58  IPRRA------------IVIDLSRRSIVSDKVYTGHGFPLLTLEEQRTGAAPVLAYEPFK 105
            PRRA            I++DLS +SIVSDKVY+GHG+PLLT EEQ   +   L Y PF 
Sbjct: 85  PPRRAFVITRLHSQTHEIIVDLSTQSIVSDKVYSGHGYPLLTSEEQTAASELPLTYPPFI 144

Query: 106 ASVKKRGLNISDV-------------ESKRELKFPCFYTDQGTVNMFLRPIEGITIVVDI 152
           AS++KR L +SDV             +S+R LK  CFYTD GT N+++RPIEG+TIVVD+
Sbjct: 145 ASIRKRKLKLSDVVCSTFTVGWFGEEKSRRVLKILCFYTD-GTANLYMRPIEGVTIVVDL 203

Query: 153 EEMKVTQYNDREVAPIPKSEPTEYRWSKLKPPFGPRLNSVTTL-PTGPGFKIDGNTVKWA 211
           +EMK+T+Y+DR   P+P++E TEYR SK KPPFGPRLN V+++ P GPGFKIDG+ ++WA
Sbjct: 204 DEMKITEYHDRLTVPMPEAEGTEYRLSKQKPPFGPRLNGVSSMQPDGPGFKIDGHNIRWA 263

Query: 212 NWVFNVGFDARVGTIISTASIYDVDMHKYRR----------------------------- 242
           NW F+V FDAR G IIS ASIYD+    +RR                             
Sbjct: 264 NWDFHVSFDARAGLIISLASIYDLQKRTFRRVLYRGYLSELFVPYMDPTEEWYYKTFFDL 323

Query: 243 -------------PLKDCPPNAVFIDGYFTSQDGAPIQTPNAICIFERHTGDVMWRHTEA 289
                        PL DCP NAVF+DGY+  QDG P++  NA CIFE+  G +MWRHTE 
Sbjct: 324 GEFGFGLCTVPLQPLADCPSNAVFMDGYYAGQDGKPVKISNAFCIFEQQAGRIMWRHTEV 383

Query: 290 EMPGD-VREVRPEVSLVVRMVATVGNYDYVIDWEFKPSGSIKLGC------KVRPVEYTH 342
           E+PG+ +REVRPEVSLVVRMVATVGNYDY++DWEFKPSGSIKLG       +V+ V YTH
Sbjct: 384 EIPGEEIREVRPEVSLVVRMVATVGNYDYILDWEFKPSGSIKLGVGLTGILEVKGVSYTH 443

Query: 343 IDQIKEDQQGKLVADNTIGVNHDHFLNYYLDLDIDGYANSFEKTKL-------------- 388
             QIKED  G L+A NTIGVNHDHFL Y+LDLD+DG ANSF K  L              
Sbjct: 444 TSQIKEDVYGTLLAHNTIGVNHDHFLTYHLDLDVDGDANSFVKANLETKRVKDNISPRKS 503

Query: 389 --TVEKETAKTEFEARLKLDTKPMEFAMVNPNKKTKIGHPVGYRLLPGLVVGPLLTDDDY 446
             TV  ETAKTE +A+++L  KP E  +VNPNKKTK+G+ VGYRL+PG +  PLL+DDDY
Sbjct: 504 YWTVVSETAKTESDAQIQLGLKPAELIVVNPNKKTKLGNYVGYRLIPGSLSSPLLSDDDY 563

Query: 447 PQIRAGFTDYNIWVTPYNKSEKYSGGNYVDQSHGDDTLLQWTDGNREIENKDIVLWYTMG 506
           PQIR  FT Y++W+TPYNKSEK++GG Y+DQS GDDTL  W+  NREIENKDIVLWYT+G
Sbjct: 564 PQIRGAFTKYDVWITPYNKSEKWAGGLYMDQSRGDDTLAVWSQRNREIENKDIVLWYTIG 623

Query: 507 IHHAPCQEDFPVMPTVSGGFELRPTNFFEYNPVLKVIPPKHVQWPNCTGK 556
            HH PCQEDFPVMPT+SGGFELRPTNFFE NPVLK  PP +  WPNCT K
Sbjct: 624 FHHVPCQEDFPVMPTLSGGFELRPTNFFERNPVLKTKPPTYGHWPNCTTK 673

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|147806124|emb|CAN76699.1| hypothetical protein VITISV_012123 [Vitis vinifera] Back     alignment and taxonomy information
>gi|225432632|ref|XP_002278182.1| PREDICTED: primary amine oxidase [Vitis vinifera] gi|297737032|emb|CBI26233.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|147794975|emb|CAN73878.1| hypothetical protein VITISV_029120 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356574406|ref|XP_003555339.1| PREDICTED: primary amine oxidase-like [Glycine max] Back     alignment and taxonomy information
>gi|357444253|ref|XP_003592404.1| Primary amine oxidase [Medicago truncatula] gi|355481452|gb|AES62655.1| Primary amine oxidase [Medicago truncatula] Back     alignment and taxonomy information
>gi|356574404|ref|XP_003555338.1| PREDICTED: primary amine oxidase-like [Glycine max] Back     alignment and taxonomy information
>gi|356575837|ref|XP_003556043.1| PREDICTED: primary amine oxidase-like [Glycine max] Back     alignment and taxonomy information
>gi|225432644|ref|XP_002278327.1| PREDICTED: primary amine oxidase [Vitis vinifera] gi|297737038|emb|CBI26239.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|147832635|emb|CAN68223.1| hypothetical protein VITISV_040530 [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query567
TAIR|locus:2028666741 AT1G31670 [Arabidopsis thalian 0.550 0.421 0.556 6.9e-145
TAIR|locus:2026267712 CuAO1 "COPPER AMINE OXIDASE1" 0.298 0.237 0.523 1.6e-116
UNIPROTKB|Q43077674 Q43077 "Primary amine oxidase" 0.493 0.415 0.454 1.6e-113
TAIR|locus:2080173687 AT3G43670 [Arabidopsis thalian 0.340 0.280 0.453 4.1e-111
TAIR|locus:2139069741 AT4G12290 [Arabidopsis thalian 0.298 0.228 0.488 6.9e-105
TAIR|locus:2028636677 AT1G31690 [Arabidopsis thalian 0.319 0.267 0.552 2e-102
TAIR|locus:2028606681 AT1G31710 [Arabidopsis thalian 0.312 0.259 0.548 2.8e-101
TAIR|locus:2129520650 AO1 "amine oxidase 1" [Arabido 0.282 0.246 0.540 2.8e-84
TAIR|locus:2139054300 AT4G12280 [Arabidopsis thalian 0.303 0.573 0.473 1.2e-67
UNIPROTKB|P46883757 tynA "TynA" [Escherichia coli 0.259 0.194 0.368 4.2e-46
TAIR|locus:2028666 AT1G31670 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 939 (335.6 bits), Expect = 6.9e-145, Sum P(2) = 6.9e-145
 Identities = 182/327 (55%), Positives = 224/327 (68%)

Query:   243 PLKDCPPNAVFIDGYFTSQDGAPIQTPNAICIFERHTGDVMWRHTEAEMPGDVREVRPEV 302
             P  DCP NA F+DG F SQDG PI+  N +CIFE++ GD+MWRHTE E+PG   +VRP+V
Sbjct:   417 PYTDCPGNAAFMDGVFASQDGTPIKITNVMCIFEKYAGDIMWRHTEIEIPG--LKVRPDV 474

Query:   303 SLVVRMVATVGNYDYVIDWEFKPSGSIKLGC------KVRPVEYTHIDQIKEDQ-QGKLV 355
             SLVVRMV TVGNYDY++D+EFKPSGSIK+G       +V+PV+Y +  +IKED   G +V
Sbjct:   475 SLVVRMVTTVGNYDYIVDYEFKPSGSIKIGVGLTGVLEVKPVKYVNTSEIKEDDIHGTIV 534

Query:   356 ADNTIGVNHDHFLNYYLDLDIDGYANSFEKTKLTVEKETAKTEFEARLKLDT----KPME 411
             ADNTIGVNHDHF+ Y LDLDIDG  NSF +++L V K T K+    R    T    K  E
Sbjct:   535 ADNTIGVNHDHFVTYRLDLDIDGTDNSFVRSEL-VTKRTPKSVNTPRKSYWTTKRLKAEE 593

Query:   412 FAMVNPNKKTKIGHXXXXXXXXXXXXXX-XXTDDDYPQIRAGFTDYNIWVTPYNKSEKYS 470
               +VNP++KTK G+                   DDYPQIRA FT+YN+W+TPYN +E ++
Sbjct:   594 LLVVNPSRKTKHGNEVGYRLLHGPASEGPLLAQDDYPQIRAAFTNYNVWITPYNNTEVWA 653

Query:   471 GGNYVDQSHGDDTLLQWTDGNREIENKDIVLWYTMGIHHAPCQEDFPVMPTVSGGFELRP 530
              G Y D+S GDDTL  W+  NR+IE  DIV+WYT+G HH PCQEDFP MPT+ GGFELRP
Sbjct:   654 SGLYADRSQGDDTLAVWSQRNRKIEKTDIVMWYTVGFHHVPCQEDFPTMPTLFGGFELRP 713

Query:   531 TNFFEYNPVLKVIPPKHVQWPNCTGKH 557
             TNFFE NP LK  P K    P CT ++
Sbjct:   714 TNFFEQNPDLKTKPIKLNTTPTCTARN 740
GO:0005507 "copper ion binding" evidence=IEA;ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0008131 "primary amine oxidase activity" evidence=IEA
GO:0009308 "amine metabolic process" evidence=IEA
GO:0048038 "quinone binding" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
TAIR|locus:2026267 CuAO1 "COPPER AMINE OXIDASE1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q43077 Q43077 "Primary amine oxidase" [Pisum sativum (taxid:3888)] Back     alignment and assigned GO terms
TAIR|locus:2080173 AT3G43670 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2139069 AT4G12290 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2028636 AT1G31690 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2028606 AT1G31710 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2129520 AO1 "amine oxidase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2139054 AT4G12280 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|P46883 tynA "TynA" [Escherichia coli K-12 (taxid:83333)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.4.3.210.914
3rd Layer1.4.3LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00019973001
RecName- Full=Copper amine oxidase; EC=1.4.3.6; (674 aa)
(Vitis vinifera)
Predicted Functional Partners:
ODC
SubName- Full=Chromosome chr18 scaffold_1, whole genome shotgun sequence; (134 aa)
      • 0.483
ABP1
SubName- Full=Chromosome chr7 scaffold_31, whole genome shotgun sequence; (179 aa)
      • 0.480
APX
SubName- Full=Chromosome chr8 scaffold_29, whole genome shotgun sequence; (245 aa)
      • 0.480

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query567
PLN02566646 PLN02566, PLN02566, amine oxidase (copper-containi 0.0
pfam01179411 pfam01179, Cu_amine_oxid, Copper amine oxidase, en 1e-137
PRK11504647 PRK11504, tynA, tyramine oxidase; Provisional 1e-126
COG3733654 COG3733, TynA, Cu2+-containing amine oxidase [Seco 1e-113
PRK14696721 PRK14696, tynA, tyramine oxidase; Provisional 4e-78
pfam02728101 pfam02728, Cu_amine_oxidN3, Copper amine oxidase, 1e-14
pfam0272786 pfam02727, Cu_amine_oxidN2, Copper amine oxidase, 2e-11
>gnl|CDD|215306 PLN02566, PLN02566, amine oxidase (copper-containing) Back     alignment and domain information 
 Score =  642 bits (1657), Expect = 0.0
 Identities = 306/638 (47%), Positives = 394/638 (61%), Gaps = 105/638 (16%)

Query: 1   IWSCHRPLDSLSPAEFTLVQTIVKTSYPSN--NLSFHYVGLDEPDKAVVYSWLSNSKIK- 57
           + S + PLD L+P E   ++ IV+ S+  N  NL+FH++ L+EP+K  V  WLS++    
Sbjct: 17  VASLYHPLDPLNPQEINKIRLIVQKSHLGNLPNLTFHFLDLEEPEKRDVLKWLSSNPSNK 76

Query: 58  -IPRRA-------------IVIDLSRRSIVSDKVYTGHGFPLLTLEEQRTGAAPVLAYEP 103
             P R              +++DL+  SI S +VYTGHG+P LT  E    +   L Y  
Sbjct: 77  SPPPRRAKVVVRAGGETYELIVDLATGSITSSRVYTGHGYPPLTFIELFQASKLPLKYPK 136

Query: 104 FKASVKKRGLNISDVE-------------SKRELKFPCFYTDQGTVNMFLRPIEGITIVV 150
           FK S+ +RGLNIS+V              +KR LK  CFY   G+VN+F RPIEGI+I++
Sbjct: 137 FKKSILRRGLNISEVSCIPFTVGWYGETVTKRALKISCFYRG-GSVNVFARPIEGISILI 195

Query: 151 DIEEMKVTQYNDREVAPIPKSEPTEYRWSKLKPPFGPRLNSVTTLPTGPGFKIDGNTVKW 210
           D++ M++ +Y+DR  AP+PK+E T++R +K KP       S     +  GF I G+ VKW
Sbjct: 196 DVDSMQIIKYSDRFRAPLPKAEGTDFR-TKHKP------FSFPCNVSDSGFTILGHRVKW 248

Query: 211 ANWVFNVGFDARVGTIISTASIYDVDMHKYRR---------------------------- 242
           ANW F+VGFDAR G  ISTAS++D  + ++RR                            
Sbjct: 249 ANWDFHVGFDARAGVTISTASVFDAKVKRFRRVLYRGHVSETFVPYMDPTSEWYFRTFMD 308

Query: 243 --------------PLKDCPPNAVFIDGYFTSQDGAPIQTPNAICIFERHTGDVMWRHTE 288
                         PL DCP NAV++DGY    DG   +  N ICIFER++GDV +RHTE
Sbjct: 309 IGEFGFGRSAVTLQPLIDCPANAVYLDGYVAGADGQAQKMTNVICIFERYSGDVAFRHTE 368

Query: 289 AEMPGDV-REVRPEVSLVVRMVATVGNYDYVIDWEFKPSGSIKLGC------KVRPVEYT 341
             +PG V R   PE+SLVVRMVAT+GNYDY++DWEFK SGSIK+G       +++   YT
Sbjct: 369 INVPGRVIRSGEPEISLVVRMVATLGNYDYILDWEFKKSGSIKVGVDLTGVLEMKATSYT 428

Query: 342 HIDQIKEDQQGKLVADNTIGVNHDHFLNYYLDLDIDGYANSFEKTKL------------- 388
           + DQI +D  G LVA+NTI VNHDHFL YYLDLD+DG  NSF K KL             
Sbjct: 429 NNDQITKDVYGTLVAENTIAVNHDHFLTYYLDLDVDGNGNSFVKAKLQTARVTAVNASSP 488

Query: 389 -----TVEKETAKTEFEARLKLDTKPMEFAMVNPNKKTKIGHPVGYRLLPGLVVGPLLTD 443
                TV KETAKTE E R++L ++P E  +VNPNKKTK+G+ VGYRL+ G  V  LL+D
Sbjct: 489 RKSYWTVVKETAKTEAEGRIRLGSEPAELLIVNPNKKTKLGNQVGYRLITGQPVTSLLSD 548

Query: 444 DDYPQIRAGFTDYNIWVTPYNKSEKYSGGNYVDQSHGDDTLLQWTDGNREIENKDIVLWY 503
           DDYPQIRA +T Y +WVT YNKSE+++GG Y D+S GDD L  W+  NREIENKDIVLWY
Sbjct: 549 DDYPQIRAAYTKYQVWVTAYNKSERWAGGFYADRSRGDDGLAVWSSRNREIENKDIVLWY 608

Query: 504 TMGIHHAPCQEDFPVMPTVSGGFELRPTNFFEYNPVLK 541
           T+G HH P QEDFPVMPT+ GGFELRP NFFE NP+L+
Sbjct: 609 TVGFHHIPYQEDFPVMPTLHGGFELRPANFFESNPLLR 646

Length = 646
>gnl|CDD|216347 pfam01179, Cu_amine_oxid, Copper amine oxidase, enzyme domain Back     alignment and domain information
>gnl|CDD|236919 PRK11504, tynA, tyramine oxidase; Provisional Back     alignment and domain information
>gnl|CDD|226256 COG3733, TynA, Cu2+-containing amine oxidase [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|184793 PRK14696, tynA, tyramine oxidase; Provisional Back     alignment and domain information
>gnl|CDD|202361 pfam02728, Cu_amine_oxidN3, Copper amine oxidase, N3 domain Back     alignment and domain information
>gnl|CDD|145726 pfam02727, Cu_amine_oxidN2, Copper amine oxidase, N2 domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 567
PRK11504647 tynA tyramine oxidase; Provisional 100.0
PLN02566646 amine oxidase (copper-containing) 100.0
PRK14696721 tynA tyramine oxidase; Provisional 100.0
COG3733654 TynA Cu2+-containing amine oxidase [Secondary meta 100.0
KOG1186670 consensus Copper amine oxidase [Secondary metaboli 100.0
PF01179413 Cu_amine_oxid: Copper amine oxidase, enzyme domain 100.0
PF02728101 Cu_amine_oxidN3: Copper amine oxidase, N3 domain; 99.75
PF0272786 Cu_amine_oxidN2: Copper amine oxidase, N2 domain; 99.6
>PRK11504 tynA tyramine oxidase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=5.6e-162  Score=1337.95  Aligned_cols=539  Identities=35%  Similarity=0.587  Sum_probs=503.4

Q ss_pred             CCCCCCCCCHHHHHHHHHHHHhcCC-CCCeeEEEEEccCCChHHhhhhhcCCCCCCCceEEE--------------EECC
Q 040402            4 CHRPLDSLSPAEFTLVQTIVKTSYP-SNNLSFHYVGLDEPDKAVVYSWLSNSKIKIPRRAIV--------------IDLS   68 (567)
Q Consensus         4 ~~HPldpLs~~Ei~~a~~~l~~~~~-~~~~~f~~I~L~EP~K~~vl~~l~~~~~~p~R~A~v--------------V~L~   68 (567)
                      ++|||||||++||++|++||+++.+ +..++|.+|+|.||+|++|++|++|.+  ++|+|+|              |||+
T Consensus        12 ~~HPLdpLt~~Ei~~a~~iv~~~~~~~~~~~F~~i~L~EP~K~~v~~~~~g~~--~~R~a~v~~~~~~~~~~~e~vVdL~   89 (647)
T PRK11504         12 VSHPLDPLTAAEIEAAVAILRAEGLLGESTRFVSIELAEPPKAEVLAFDPGDP--IDRRAFVVLYDRATGKTYEAVVSLT   89 (647)
T ss_pred             CCCCCCCCCHHHHHHHHHHHHhccccCCceEEEEeeccCCCHHHHHhhhcCCC--CCcEEEEEEEECCCCcEEEEEEECC
Confidence            4699999999999999999999875 689999999999999999999999864  4799999              8899


Q ss_pred             CCcEEEEEEecCCCCCCCCHHHHHHHHhhhccCHHHHHHHHHcCCC-cccc--------------c-CceEEEEEEEeee
Q 040402           69 RRSIVSDKVYTGHGFPLLTLEEQRTGAAPVLAYEPFKASVKKRGLN-ISDV--------------E-SKRELKFPCFYTD  132 (567)
Q Consensus        69 ~~~v~~~~~~~~~~~p~~~~eE~~~~~~~~~~~p~~~~a~~~rgl~-~~~v--------------~-~rR~~~~~~~~~~  132 (567)
                      +++|++++.++ ++||+++.+||.+++++|++||.|++||++|||+ +++|              + +||++|++||+|.
T Consensus        90 ~~~V~~~~~~~-~~~p~~~~~e~~~~e~~~~~dp~~~~ai~~rgl~~~~~V~~dpw~~G~~~~~~~~~~Rl~~~~~~~r~  168 (647)
T PRK11504         90 AGEVVSWEEIP-GVQPPILLEEFEECEEVVRADPRWQAALAKRGITDFDLVMVDPWSAGYFGEPEERGRRLARGLAFVRA  168 (647)
T ss_pred             CCEEEEEEECC-CccCCcCHHHHHHHHHHHhcCHHHHHHHHHcCCCCcceEEEcCccccccCCCCcCCceEEEEEEEEec
Confidence            99999998876 6799999999999999999999999999999995 5656              2 5999999999998


Q ss_pred             CCCCCcccCCCCCeEEEEecCCceEEEEeCCccccCCCCCCCCCCcCCCCCCCCCCCCCCcc-CCCCCeeEEeCcEEeec
Q 040402          133 QGTVNMFLRPIEGITIVVDIEEMKVTQYNDREVAPIPKSEPTEYRWSKLKPPFGPRLNSVTT-LPTGPGFKIDGNTVKWA  211 (567)
Q Consensus       133 ~~~~n~yahPi~gl~~~vD~~~~~v~~i~d~~~~~~p~~~~~~y~~~~~~~~~r~~~kP~~i-qPeG~sf~v~g~~V~w~  211 (567)
                      ++++|+||||||||.++||++++||++|+|.+..|+|+.+ ++|.++++. ++|+++||++| ||||+||+|+|++|+||
T Consensus       169 ~~~~n~Ya~Pi~G~~~vvDl~~~~vv~i~d~g~~p~p~~~-~~Y~~~~~~-~~r~dlkPl~i~QPeG~sF~v~g~~V~W~  246 (647)
T PRK11504        169 DPGDNGYARPIEGLVAVVDLNTMEVLRVEDHGVVPIPAED-GNYDPEFIP-PLRTDLKPLEITQPEGPSFTVDGNEVEWQ  246 (647)
T ss_pred             CCCccccccccCceEEEEECCCCEEEEEecCCCCCCCCCC-CCCChhHcc-ccccCCCCcceeCCCCCcEEEcCCEEEEC
Confidence            8889999999999999999999999999998877888765 699988764 78999999999 99999999999999999


Q ss_pred             ceEEEEeecCCccceEEccEEecCCCCcccC------------------------------------------CCCCCCC
Q 040402          212 NWVFNVGFDARVGTIISTASIYDVDMHKYRR------------------------------------------PLKDCPP  249 (567)
Q Consensus       212 ~W~f~~~f~~reGl~L~~v~~~d~r~~~~R~------------------------------------------~G~DCpg  249 (567)
                      ||+||+|||+||||+||||+|+|  .|..|+                                          +||||||
T Consensus       247 ~W~f~vgf~~reGlvL~dv~y~d--~g~~R~v~YrlslsEm~VPYgdp~p~~~~k~~fD~GeyG~G~~an~L~lGcDCpg  324 (647)
T PRK11504        247 KWSFRVGFNPREGLVLHQVSYDD--GGRERPILYRASLSEMVVPYGDPSPTHYWKNAFDAGEYGLGRLANSLELGCDCLG  324 (647)
T ss_pred             CcEEEEecCCCCceEEEEEEEcC--CCCcceEEEEeeeeeeeeecCCCCcchhhceeeeccccCCcccccccccCCCCCC
Confidence            99999999999999999999998  222222                                          9999999


Q ss_pred             CcEEeeeEEEcCCCceeEeCcceEEeeecCCCccccccccCCCCceeeeeeceEEEEEEEEEeeccceEEEEEEeeCccE
Q 040402          250 NAVFIDGYFTSQDGAPIQTPNAICIFERHTGDVMWRHTEAEMPGDVREVRPEVSLVVRMVATVGNYDYVIDWEFKPSGSI  329 (567)
Q Consensus       250 ~a~YlD~~~~~~~g~p~~~~naiCi~E~d~~g~l~kH~~~~~~~~~~~~r~~~~LVvr~i~TVgNYdYi~~~~F~~dGtI  329 (567)
                      +|+|||+++.+++|+|++++|||||||+| +|+||||++++++..  .+|++++||||+|+|||||||||+|+|||||+|
T Consensus       325 ~i~Y~D~~~~~~~G~p~~~~naICihE~D-~GilwkHt~~r~~~~--~v~r~r~LVvr~I~TVgNYdYi~~w~F~qdG~I  401 (647)
T PRK11504        325 EIRYFDAVLADSDGEPYTIKNAICMHEED-YGILWKHTDFRTGSA--EVRRSRRLVISFFATVGNYDYGFYWYFYQDGTI  401 (647)
T ss_pred             CCEEcceEEecCCCCeEEecCEEEEeeec-CCeeeeeeccCCCcE--EEEeccEEEEEEEEecccccEEEEEEEecCceE
Confidence            99999999999999999999999999999 779999999997665  344555999999999999999999999999999


Q ss_pred             EEEEEEeeeEEeeccccc---cCCCCccccCCcccccccEEEeeeeeecccCCCCeEEEEEE---------------EEE
Q 040402          330 KLGCKVRPVEYTHIDQIK---EDQQGKLVADNTIGVNHDHFLNYYLDLDIDGYANSFEKTKL---------------TVE  391 (567)
Q Consensus       330 e~~v~v~atg~~~~~~~~---~~~yG~~V~~~~~a~~HqH~f~~RlD~dIdG~~Nsv~~~d~---------------~~~  391 (567)
                      |++|  +||||+++....   +.+||++|+|+++|++|||+|||||||||||.+|||++.|+               +++
T Consensus       402 e~eV--~aTGil~t~~~~~~~~~~yGt~V~~~v~a~~HqH~f~~RlD~dIDG~~Nsv~~~d~~~~p~~~~np~g~~~~~~  479 (647)
T PRK11504        402 EFEV--KLTGIVFTAAVPPGETPPYGTLVAPGLYAPNHQHFFNARLDMDVDGPGNSVYEVNSVPVPMGPDNPHGNAFYTR  479 (647)
T ss_pred             EEEE--EeeeEEEeeeeCCCccCCCcceecCCcccccceEEEEEEEcccccCCCceEEEEEeEecCCCCCCccceEEEEE
Confidence            9987  999999987662   46899999999999999999999999999999999999998               889


Q ss_pred             EEeeeChHhHhhccCC-CCcEEEEEcCCCCCCCCCceeEEEecCCCcCCCCCCCCcccccccccceeeEEeecCCCCCCC
Q 040402          392 KETAKTEFEARLKLDT-KPMEFAMVNPNKKTKIGHPVGYRLLPGLVVGPLLTDDDYPQIRAGFTDYNIWVTPYNKSEKYS  470 (567)
Q Consensus       392 ~~~~~tE~~a~~~~~~-~~r~~~i~N~~~~N~~G~p~gYkl~p~~~~~~l~~~~s~~~~ra~fa~~~lwVT~y~~~E~~a  470 (567)
                      +++++||++|++++++ ++|+|+|+|++++|++|+|+||||+|++++++|++++|+..+||+||+||||||+|+|+|+||
T Consensus       480 ~t~l~tE~~a~~~~~~~~~R~~~ivN~~~~N~~G~pvgYkl~p~~~~~~l~~~~s~~~~ra~fa~~~lwVT~y~d~E~~a  559 (647)
T PRK11504        480 ETLLETESEAARDADPSTGRYWKIVNPNKKNRLGEPVAYKLVPGGNPPLLADPGSSIRQRAGFATHHLWVTPYDPDERYA  559 (647)
T ss_pred             EEEecchhhhhhccCCCCccEEEEECCCCcCCCCCeeeEEEccCCCccccCCCCchhhhcchhhhCcEEEeccCCCcccc
Confidence            9999999999999999 999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCcCccCCCCCCChhhhccCCCceeeCCeEEEEEeccccCCCCCCCCCccceeeeEEEEeCCCCCCCCcccCCCCCCCCC
Q 040402          471 GGNYVDQSHGDDTLLQWTDGNREIENKDIVLWYTMGIHHAPCQEDFPVMPTVSGGFELRPTNFFEYNPVLKVIPPKHVQW  550 (567)
Q Consensus       471 sg~y~~q~~~~~~l~~~~~~~e~i~~~DiV~W~t~G~~H~Pr~ED~Pvmp~~~~~f~L~P~nFFd~nP~ldvp~~~~~~~  550 (567)
                      ||+|++|+.+++||++|+++||+|+|+|||+|||||+||+||+|||||||++++||+|||+|||++||+||||++.++..
T Consensus       560 ag~y~~Qs~~~~gl~~~~~~~~~i~~~DiVlW~t~G~~HvPr~ED~PvMP~~~~gf~L~P~nFF~~NPaldvp~s~~~~~  639 (647)
T PRK11504        560 AGDYPNQSAGGDGLPAYIAADRSIENTDVVLWYTFGITHVPRPEDWPVMPVDYAGFKLKPVGFFDRNPALDLPPEPPAAC  639 (647)
T ss_pred             CCCCcccCCCCCCHHHHhcCCCccccCceEEEEecCcccCCChhhCCCCccceEEEEEEcCCCCCCCccccCCCcccccc
Confidence            99999999998999999999999999999999999999999999999999999999999999999999999999988655


Q ss_pred             CCCC
Q 040402          551 PNCT  554 (567)
Q Consensus       551 ~~~~  554 (567)
                      ++|.
T Consensus       640 ~~~~  643 (647)
T PRK11504        640 HEHG  643 (647)
T ss_pred             cccC
Confidence            5443

>PLN02566 amine oxidase (copper-containing) Back     alignment and domain information
>PRK14696 tynA tyramine oxidase; Provisional Back     alignment and domain information
>COG3733 TynA Cu2+-containing amine oxidase [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>KOG1186 consensus Copper amine oxidase [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PF01179 Cu_amine_oxid: Copper amine oxidase, enzyme domain; InterPro: IPR015798 Amine oxidases (AO) are enzymes that catalyse the oxidation of a wide range of biogenic amines including many neurotransmitters, histamine and xenobiotic amines Back     alignment and domain information
>PF02728 Cu_amine_oxidN3: Copper amine oxidase, N3 domain; InterPro: IPR015802 Amine oxidases (AO) are enzymes that catalyse the oxidation of a wide range of biogenic amines including many neurotransmitters, histamine and xenobiotic amines Back     alignment and domain information
>PF02727 Cu_amine_oxidN2: Copper amine oxidase, N2 domain; InterPro: IPR015800 Amine oxidases (AO) are enzymes that catalyse the oxidation of a wide range of biogenic amines including many neurotransmitters, histamine and xenobiotic amines Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query567
1w2z_A649 Psao And Xenon Length = 649 1e-159
1ksi_A642 Crystal Structure Of A Eukaryotic (Pea Seedling) Co 1e-159
2wgq_A727 Zinc Substituted E Coli Copper Amine Oxidase, A Mod 2e-54
1qal_A721 The Active Site Base Controls Cofactor Reactivity I 1e-53
1jrq_A727 X-Ray Structure Analysis Of The Role Of The Conserv 2e-53
1qaf_A721 The Active Site Base Controls Cofactor Reactivity I 2e-53
1oac_A727 Crystal Structure Of A Quinoenzyme: Copper Amine Ox 2e-53
1qak_A722 The Active Site Base Controls Cofactor Reactivity I 2e-53
1ivu_A638 Crystal Structure Of Copper Amine Oxidase From Arth 6e-38
1sih_A646 Agao In Covalent Complex With The Inhibitor Moba (" 3e-37
2cwt_A638 Catalytic Base Deletion In Copper Amine Oxidase Fro 4e-37
2yx9_A638 Crystal Structure Of D298k Copper Amine Oxidase Fro 4e-37
1ivv_A638 Crystal Structure Of Copper Amine Oxidase From Arth 4e-37
1ui7_A638 Site-Directed Mutagenesis Of His433 Involved In Bin 6e-37
2e2u_A628 Substrate Schiff-Base Analogue Of Copper Amine Oxid 7e-37
1ui8_A638 Site-directed Mutagenesis Of His592 Involved In Bin 5e-36
3sx1_A692 Hansenula Polymorpha Copper Amine Oxidase-1 In Its 2e-35
1ekm_A656 Crystal Structure At 2.5 A Resolution Of Zinc-Subst 3e-35
3n9h_A692 Crystal Structural Of Mutant Y305a In The Copper Am 1e-34
1a2v_A655 Copper Amine Oxidase From Hansenula Polymorpha Leng 2e-34
2oov_C660 Crystal Structure Of Hansenula Polymorpha Amine Oxi 8e-34
2oov_A660 Crystal Structure Of Hansenula Polymorpha Amine Oxi 5e-33
3nbj_B657 Crystal Structure Of Y305f Mutant Of The Copper Ami 9e-32
3nbb_B663 Crystal Structure Of Mutant Y305f Expressed In E. C 2e-31
3loy_A633 Crystal Structure Of A Copper-Containing Benzylamin 1e-30
3hi7_A731 Crystal Structure Of Human Diamine Oxidase Length = 2e-27
3ala_A748 Crystal Structure Of Vascular Adhesion Protein-1 In 9e-24
1us1_A763 Crystal Structure Of Human Vascular Adhesion Protei 9e-24
2c10_A735 The Structure Of A Truncated, Soluble Version Of Se 1e-23
1tu5_A746 Crystal Structure Of Bovine Plasma Copper-Containin 9e-22
3pgb_A797 Crystal Structure Of Aspergillus Nidulans Amine Oxi 1e-16
1n9e_A787 Crystal Structure Of Pichia Pastoris Lysyl Oxidase 2e-08
1rky_A747 Pplo + Xe Length = 747 3e-08
>pdb|1W2Z|A Chain A, Psao And Xenon Length = 649 Back     alignment and structure 
Iteration: 1

 Score =  559 bits (1441), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 295/645 (45%), Positives = 395/645 (61%), Gaps = 96/645 (14%)
Query: 4   CHRPLDSLSPAEFTLVQTIVKTSYP--SNNLSFHYVGLDEPDKAVVYSWLSN-SKIKIPR 60
              PLD L+  EF  VQTIV+  YP  +N L+FHY+GLD+P+K  V  + ++ + + IPR
Sbjct: 6   VQHPLDPLTKEEFLAVQTIVQNKYPISNNRLAFHYIGLDDPEKDHVLRYETHPTLVSIPR 65
Query: 61  R------------AIVIDLSRRSIVSDKVYTGHGFPLLTLEEQRTGAAPVLAYEPFKASV 108
           +             I+I+L  RSIVSD ++ G+GFP+L+++EQ       L Y PF  SV
Sbjct: 66  KIFVVAIINSQTHEILINLRIRSIVSDNIHNGYGFPILSVDEQSLAIKLPLKYPPFIDSV 125
Query: 109 KKRGLNISDV-------------ESKRELKFPCFYTDQGTVNMFLRPIEGITIVVDIEEM 155
           KKRGLN+S++             ++ R ++  CF   + TVN+++RPI GITIV D++ M
Sbjct: 126 KKRGLNLSEIVCSSFTMGWFGEEKNVRTVRLDCF-MKESTVNIYVRPITGITIVADLDLM 184
Query: 156 KVTQYNDREVAPIPKSEPTEYRWSKLKPPFGPRLNSVTT-LPTGPGFKIDGNTVKWANWV 214
           K+ +Y+DR++  +P +E TEY+ SK  PPFGP+ +S+T+  P GPGF+I+G++V WANW 
Sbjct: 185 KIVEYHDRDIEAVPTAENTEYQVSKQSPPFGPKQHSLTSHQPQGPGFQINGHSVSWANWK 244
Query: 215 FNVGFDARVGTIISTASIYDVDMHKYRR-------------------------------- 242
           F++GFD R G +IS ASIYD++ HK RR                                
Sbjct: 245 FHIGFDVRAGIVISLASIYDLEKHKSRRVLYKGYISELFVPYQDPTEEFYFKTFFDSGEF 304
Query: 243 ----------PLKDCPPNAVFIDGYFTSQDGAPIQTPNAICIFERHTGDVMWRHTEAEMP 292
                     P +DCPP+A FID Y  S +G PI   NAIC+FE++ G++MWRHTE  +P
Sbjct: 305 GFGLSTVSLIPNRDCPPHAQFIDTYVHSANGTPILLKNAICVFEQY-GNIMWRHTENGIP 363
Query: 293 GD-VREVRPEVSLVVRMVATVGNYDYVIDWEFKPSGSIKLG------CKVRPVEYTHIDQ 345
            + + E R EV+L+VR + TVGN D VIDWEFK SGSIK         +++     H D+
Sbjct: 364 NESIEESRTEVNLIVRTIVTVGNXDNVIDWEFKASGSIKPSIALSGILEIKGTNIKHKDE 423
Query: 346 IKEDQQGKLVADNTIGVNHDHFLNYYLDLDIDGYANSFEKTKL----------------T 389
           IKED  GKLV+ N+IG+ HDHF  YYLD DIDG  NSFEKT L                T
Sbjct: 424 IKEDLHGKLVSANSIGIYHDHFYIYYLDFDIDGTHNSFEKTSLKTVRIKDGSSKRKSYWT 483
Query: 390 VEKETAKTEFEARLKLDTKPMEFAMVNPNKKTKIGHXXXXXXXXXXXXXXXXTDDDYPQI 449
            E +TAKTE +A++ +   P E  +VNPN KT +G+                T+DDYPQI
Sbjct: 484 TETQTAKTESDAKITIGLAPAELVVVNPNIKTAVGNEVGYRLIPAIPAHPLLTEDDYPQI 543
Query: 450 RAGFTDYNIWVTPYNKSEKYSGGNYVDQSHGDDTLLQWTDGNREIENKDIVLWYTMGIHH 509
           R  FT+YN+WVT YN++EK++GG YVD S GDDTL  WT  NREI NKDIV+W+ +GIHH
Sbjct: 544 RGAFTNYNVWVTAYNRTEKWAGGLYVDHSRGDDTLAVWTKQNREIVNKDIVMWHVVGIHH 603
Query: 510 APCQEDFPVMPTVSGGFELRPTNFFEYNPVLKVIPPKHVQWPNCT 554
            P QEDFP+MP +S  FELRPTNFFE NPVLK + P+ V WP C+
Sbjct: 604 VPAQEDFPIMPLLSTSFELRPTNFFERNPVLKTLSPRDVAWPGCS 648
>pdb|1KSI|A Chain A, Crystal Structure Of A Eukaryotic (Pea Seedling) Copper-Containing Amine Oxidase At 2.2a Resolution Length = 642 Back     alignment and structure
>pdb|2WGQ|A Chain A, Zinc Substituted E Coli Copper Amine Oxidase, A Model For The Precursor For 2,4,5-Trihydroxyphenylalaninequinone Formation Length = 727 Back     alignment and structure
>pdb|1QAL|A Chain A, The Active Site Base Controls Cofactor Reactivity In Escherichia Coli Amine Oxidase : X-Ray Crystallographic Studies With Mutational Variants Length = 721 Back     alignment and structure
>pdb|1JRQ|A Chain A, X-Ray Structure Analysis Of The Role Of The Conserved Tyrosine-369 In Active Site Of E. Coli Amine Oxidase Length = 727 Back     alignment and structure
>pdb|1QAF|A Chain A, The Active Site Base Controls Cofactor Reactivity In Escherichia Coli Amine Oxidase : X-Ray Crystallographic Studies With Mutational Variants Length = 721 Back     alignment and structure
>pdb|1OAC|A Chain A, Crystal Structure Of A Quinoenzyme: Copper Amine Oxidase Of Escherichia Coli At 2 Angstroems Resolution Length = 727 Back     alignment and structure
>pdb|1QAK|A Chain A, The Active Site Base Controls Cofactor Reactivity In Escherichia Coli Amine Oxidase : X-ray Crystallographic Studies With Mutational Variants Length = 722 Back     alignment and structure
>pdb|1IVU|A Chain A, Crystal Structure Of Copper Amine Oxidase From Arthrobacter Globiformis: Initial Intermediate In Topaquinone Biogenesis Length = 638 Back     alignment and structure
>pdb|1SIH|A Chain A, Agao In Covalent Complex With The Inhibitor Moba ("4-(4- Methylphenoxy)-2-Butyn-1-Amine") Length = 646 Back     alignment and structure
>pdb|2CWT|A Chain A, Catalytic Base Deletion In Copper Amine Oxidase From Arthrobacter Globiformis Length = 638 Back     alignment and structure
>pdb|2YX9|A Chain A, Crystal Structure Of D298k Copper Amine Oxidase From Arthrobacter Globiformis Length = 638 Back     alignment and structure
>pdb|1IVV|A Chain A, Crystal Structure Of Copper Amine Oxidase From Arthrobacter Globiformis: Early Intermediate In Topaquinone Biogenesis Length = 638 Back     alignment and structure
>pdb|1UI7|A Chain A, Site-Directed Mutagenesis Of His433 Involved In Binding Of Copper Ion In Arthrobacter Globiformis Amine Oxidase Length = 638 Back     alignment and structure
>pdb|2E2U|A Chain A, Substrate Schiff-Base Analogue Of Copper Amine Oxidase From Arthrobacter Globiformis Formed With 4-Hydroxybenzylhydrazine Length = 628 Back     alignment and structure
>pdb|1UI8|A Chain A, Site-directed Mutagenesis Of His592 Involved In Binding Of Copper Ion In Arthrobacter Globiformis Amine Oxidase Length = 638 Back     alignment and structure
>pdb|3SX1|A Chain A, Hansenula Polymorpha Copper Amine Oxidase-1 In Its Apo Form Length = 692 Back     alignment and structure
>pdb|1EKM|A Chain A, Crystal Structure At 2.5 A Resolution Of Zinc-Substituted Copper Amine Oxidase Of Hansenula Polymorpha Expressed In Escherichia Coli Length = 656 Back     alignment and structure
>pdb|3N9H|A Chain A, Crystal Structural Of Mutant Y305a In The Copper Amine Oxidase From Hansenula Polymorpha Length = 692 Back     alignment and structure
>pdb|1A2V|A Chain A, Copper Amine Oxidase From Hansenula Polymorpha Length = 655 Back     alignment and structure
>pdb|2OOV|C Chain C, Crystal Structure Of Hansenula Polymorpha Amine Oxidase To 1.7 Angstroms Length = 660 Back     alignment and structure
>pdb|2OOV|A Chain A, Crystal Structure Of Hansenula Polymorpha Amine Oxidase To 1.7 Angstroms Length = 660 Back     alignment and structure
>pdb|3LOY|A Chain A, Crystal Structure Of A Copper-Containing Benzylamine Oxidase From Hansenula Polymorpha Length = 633 Back     alignment and structure
>pdb|3HI7|A Chain A, Crystal Structure Of Human Diamine Oxidase Length = 731 Back     alignment and structure
>pdb|3ALA|A Chain A, Crystal Structure Of Vascular Adhesion Protein-1 In Space Group C2 Length = 748 Back     alignment and structure
>pdb|1US1|A Chain A, Crystal Structure Of Human Vascular Adhesion Protein-1 Length = 763 Back     alignment and structure
>pdb|2C10|A Chain A, The Structure Of A Truncated, Soluble Version Of Semicarbazide-Sensitive Amine Oxidase Length = 735 Back     alignment and structure
>pdb|1TU5|A Chain A, Crystal Structure Of Bovine Plasma Copper-Containing Amine Oxidase Length = 746 Back     alignment and structure
>pdb|3PGB|A Chain A, Crystal Structure Of Aspergillus Nidulans Amine Oxidase Length = 797 Back     alignment and structure
>pdb|1N9E|A Chain A, Crystal Structure Of Pichia Pastoris Lysyl Oxidase Pplo Length = 787 Back     alignment and structure
>pdb|1RKY|A Chain A, Pplo + Xe Length = 747 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query567
1ksi_A642 Copper amine oxidase; PEA seedling, oxidoreductase 1e-153
1w6g_A646 Phenylethylamine oxidase; copper containing, metal 1e-137
3sxx_A692 Peroxisomal primary amine oxidase; oxidoreductase, 1e-130
1spu_A727 Copper amine oxidase; oxidoreductase, TPQ, peripla 1e-124
3loy_A633 Copper amine oxidase; TPQ, oxidoreductase; HET: TP 1e-121
1tu5_A746 Copper amine oxidase, liver isozyme; oxidoreductas 1e-112
1w7c_A747 Lysyl oxidase; AMNE oxidase, copper, oxidoreductas 1e-106
3hi7_A731 Amiloride-sensitive amine oxidase; oxidoreductase, 1e-105
3pgb_A797 Putative uncharacterized protein; oxidoreductase, 1e-102
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-05
>3sxx_A Peroxisomal primary amine oxidase; oxidoreductase, peroxisome; HET: GOL; 1.27A {Pichia angusta} PDB: 3sx1_A* 3t0u_A 3n9h_A* 3nbj_A* 3nbb_A* 2oqe_C* 2oov_C* 2oqe_A* 2oov_A* 1ekm_A 1a2v_A* Length = 692 Back     alignment and structure
>1spu_A Copper amine oxidase; oxidoreductase, TPQ, periplasmic, signal; HET: PAQ; 2.00A {Escherichia coli} SCOP: b.30.2.1 d.17.2.1 d.17.2.1 d.82.1.1 PDB: 1d6y_A* 1d6u_A* 1d6z_A* 2wgq_A 1oac_A* 1dyu_A* 2w0q_A* 2wo0_A* 2wof_A* 2woh_A* 1lvn_A* 1jrq_A* 1qak_A* 1qaf_A* 1qal_A* Length = 727 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query567
1ksi_A642 Copper amine oxidase; PEA seedling, oxidoreductase 100.0
3sxx_A692 Peroxisomal primary amine oxidase; oxidoreductase, 100.0
3loy_A633 Copper amine oxidase; TPQ, oxidoreductase; HET: TP 100.0
1w6g_A646 Phenylethylamine oxidase; copper containing, metal 100.0
1spu_A727 Copper amine oxidase; oxidoreductase, TPQ, peripla 100.0
1tu5_A746 Copper amine oxidase, liver isozyme; oxidoreductas 100.0
1w7c_A747 Lysyl oxidase; AMNE oxidase, copper, oxidoreductas 100.0
3hi7_A731 Amiloride-sensitive amine oxidase; oxidoreductase, 100.0
3pgb_A797 Putative uncharacterized protein; oxidoreductase, 100.0
>3sxx_A Peroxisomal primary amine oxidase; oxidoreductase, peroxisome; HET: GOL; 1.27A {Pichia angusta} PDB: 3sx1_A* 3t0u_A 3n9h_A* 3nbj_A* 3nbb_A* 2oqe_C* 2oov_C* 2oqe_A* 2oov_A* 1ekm_A 1a2v_A* Back     alignment and structure
>1spu_A Copper amine oxidase; oxidoreductase, TPQ, periplasmic, signal; HET: PAQ; 2.00A {Escherichia coli} SCOP: b.30.2.1 d.17.2.1 d.17.2.1 d.82.1.1 PDB: 1d6y_A* 1d6u_A* 1d6z_A* 2wgq_A 1oac_A* 1dyu_A* 2w0q_A* 2wo0_A* 2wof_A* 2woh_A* 1lvn_A* 1jrq_A* 1qak_A* 1qaf_A* 1qal_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 567
d1w2za1441 b.30.2.1 (A:207-647) Copper amine oxidase, domain 1e-136
d1w6ga1417 b.30.2.1 (A:212-628) Copper amine oxidase, domain 1e-119
d2oqea1436 b.30.2.1 (A:237-672) Copper amine oxidase, domain 1e-115
d1d6za1424 b.30.2.1 (A:301-724) Copper amine oxidase, domain 1e-111
d1w7ca1460 b.30.2.1 (A:316-775) Lysyl oxidase PplO, domain 3 1e-105
d1w2za3108 d.17.2.1 (A:99-206) Copper amine oxidase, domains 1e-25
d1w2za293 d.17.2.1 (A:6-98) Copper amine oxidase, domains 1 9e-21
d1w6ga3115 d.17.2.1 (A:97-211) Copper amine oxidase, domains 2e-18
d2oqea298 d.17.2.1 (A:18-115) Copper amine oxidase, domains 6e-18
d1d6za295 d.17.2.1 (A:91-185) Copper amine oxidase, domains 2e-16
d1d6za3115 d.17.2.1 (A:186-300) Copper amine oxidase, domains 7e-16
d2oqea3121 d.17.2.1 (A:116-236) Copper amine oxidase, domains 7e-15
d1w6ga288 d.17.2.1 (A:9-96) Copper amine oxidase, domains 1 1e-12
>d1w2za1 b.30.2.1 (A:207-647) Copper amine oxidase, domain 3 {Pea seedling (Pisum sativum) [TaxId: 3888]} Length = 441 Back     information, alignment and structure

class: All beta proteins
fold: Supersandwich
superfamily: Amine oxidase catalytic domain
family: Amine oxidase catalytic domain
domain: Copper amine oxidase, domain 3
species: Pea seedling (Pisum sativum) [TaxId: 3888]

 Score =  401 bits (1032), Expect = e-136
 Identities = 223/441 (50%), Positives = 278/441 (63%), Gaps = 67/441 (15%)

Query: 179 SKLKPPFGPRLNSVT-TLPTGPGFKIDGNTVKWANWVFNVGFDARVGTIISTASIYDVDM 237
           SK  PPFGP+ +S+T   P GPGF+I+G++V WANW F++GFD R G +IS ASIYD++ 
Sbjct: 2   SKQSPPFGPKQHSLTSHQPQGPGFQINGHSVSWANWKFHIGFDVRAGIVISLASIYDLEK 61

Query: 238 HKYRR------------------------------------------PLKDCPPNAVFID 255
           HK RR                                          P +DCPP+A FID
Sbjct: 62  HKSRRVLYKGYISELFVPYQDPTEEFYFKTFFDSGEFGFGLSTVSLIPNRDCPPHAQFID 121

Query: 256 GYFTSQDGAPIQTPNAICIFERHTGDVMWRHTEAEMPGD-VREVRPEVSLVVRMVATVGN 314
            Y  S +G PI   NAIC+FE++   +MWRHTE  +P + + E R EV+L+VR + TVGN
Sbjct: 122 TYVHSANGTPILLKNAICVFEQYGN-IMWRHTENGIPNESIEESRTEVNLIVRTIVTVGN 180

Query: 315 YDYVIDWEFKPSGSIKLGCK------VRPVEYTHIDQIKEDQQGKLVADNTIGVNHDHFL 368
           YD VIDWEFK SGSIK          ++     H D+IKED  GKLV+ N+IG+ HDHF 
Sbjct: 181 YDNVIDWEFKASGSIKPSIALSGILEIKGTNIKHKDEIKEDLHGKLVSANSIGIYHDHFY 240

Query: 369 NYYLDLDIDGYANSFEKTKL----------------TVEKETAKTEFEARLKLDTKPMEF 412
            YYLD DIDG  NSFEKT L                T E +TAKTE +A++ +   P E 
Sbjct: 241 IYYLDFDIDGTHNSFEKTSLKTVRIKDGSSKRKSYWTTETQTAKTESDAKITIGLAPAEL 300

Query: 413 AMVNPNKKTKIGHPVGYRLLPGLVVGPLLTDDDYPQIRAGFTDYNIWVTPYNKSEKYSGG 472
            +VNPN KT +G+ VGYRL+P +   PLLT+DDYPQIR  FT+YN+WVT YN++EK++GG
Sbjct: 301 VVVNPNIKTAVGNEVGYRLIPAIPAHPLLTEDDYPQIRGAFTNYNVWVTAYNRTEKWAGG 360

Query: 473 NYVDQSHGDDTLLQWTDGNREIENKDIVLWYTMGIHHAPCQEDFPVMPTVSGGFELRPTN 532
            YVD S GDDTL  WT  NREI NKDIV+W+ +GIHH P QEDFP+MP +S  FELRPTN
Sbjct: 361 LYVDHSRGDDTLAVWTKQNREIVNKDIVMWHVVGIHHVPAQEDFPIMPLLSTSFELRPTN 420

Query: 533 FFEYNPVLKVIPPKHVQWPNC 553
           FFE NPVLK + P+ V WP C
Sbjct: 421 FFERNPVLKTLSPRDVAWPGC 441
>d1w6ga1 b.30.2.1 (A:212-628) Copper amine oxidase, domain 3 {Arthrobacter globiformis [TaxId: 1665]} Length = 417 Back     information, alignment and structure
>d2oqea1 b.30.2.1 (A:237-672) Copper amine oxidase, domain 3 {Yeast (Hansenula polymorpha) [TaxId: 4905]} Length = 436 Back     information, alignment and structure
>d1d6za1 b.30.2.1 (A:301-724) Copper amine oxidase, domain 3 {Escherichia coli [TaxId: 562]} Length = 424 Back     information, alignment and structure
>d1w7ca1 b.30.2.1 (A:316-775) Lysyl oxidase PplO, domain 3 {Yeast (Pichia pastoris) [TaxId: 4922]} Length = 460 Back     information, alignment and structure
>d1w2za3 d.17.2.1 (A:99-206) Copper amine oxidase, domains 1 and 2 {Pea seedling (Pisum sativum) [TaxId: 3888]} Length = 108 Back     information, alignment and structure
>d1w2za2 d.17.2.1 (A:6-98) Copper amine oxidase, domains 1 and 2 {Pea seedling (Pisum sativum) [TaxId: 3888]} Length = 93 Back     information, alignment and structure
>d1w6ga3 d.17.2.1 (A:97-211) Copper amine oxidase, domains 1 and 2 {Arthrobacter globiformis [TaxId: 1665]} Length = 115 Back     information, alignment and structure
>d2oqea2 d.17.2.1 (A:18-115) Copper amine oxidase, domains 1 and 2 {Yeast (Hansenula polymorpha) [TaxId: 4905]} Length = 98 Back     information, alignment and structure
>d1d6za2 d.17.2.1 (A:91-185) Copper amine oxidase, domains 1 and 2 {Escherichia coli [TaxId: 562]} Length = 95 Back     information, alignment and structure
>d1d6za3 d.17.2.1 (A:186-300) Copper amine oxidase, domains 1 and 2 {Escherichia coli [TaxId: 562]} Length = 115 Back     information, alignment and structure
>d2oqea3 d.17.2.1 (A:116-236) Copper amine oxidase, domains 1 and 2 {Yeast (Hansenula polymorpha) [TaxId: 4905]} Length = 121 Back     information, alignment and structure
>d1w6ga2 d.17.2.1 (A:9-96) Copper amine oxidase, domains 1 and 2 {Arthrobacter globiformis [TaxId: 1665]} Length = 88 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query567
d1w2za1441 Copper amine oxidase, domain 3 {Pea seedling (Pisu 100.0
d1w6ga1417 Copper amine oxidase, domain 3 {Arthrobacter globi 100.0
d2oqea1436 Copper amine oxidase, domain 3 {Yeast (Hansenula p 100.0
d1d6za1424 Copper amine oxidase, domain 3 {Escherichia coli [ 100.0
d1w7ca1460 Lysyl oxidase PplO, domain 3 {Yeast (Pichia pastor 100.0
d1w2za3108 Copper amine oxidase, domains 1 and 2 {Pea seedlin 99.9
d1w6ga3115 Copper amine oxidase, domains 1 and 2 {Arthrobacte 99.87
d2oqea3121 Copper amine oxidase, domains 1 and 2 {Yeast (Hans 99.85
d1d6za3115 Copper amine oxidase, domains 1 and 2 {Escherichia 99.84
d2oqea298 Copper amine oxidase, domains 1 and 2 {Yeast (Hans 99.79
d1d6za295 Copper amine oxidase, domains 1 and 2 {Escherichia 99.75
d1w2za293 Copper amine oxidase, domains 1 and 2 {Pea seedlin 99.74
d1w6ga288 Copper amine oxidase, domains 1 and 2 {Arthrobacte 99.54
d1w7ca2127 Lysyl oxidase PplO, domains 1 and 2 {Yeast (Pichia 99.0
d1w7ca3146 Lysyl oxidase PplO, domains 1 and 2 {Yeast (Pichia 85.74
>d1w2za1 b.30.2.1 (A:207-647) Copper amine oxidase, domain 3 {Pea seedling (Pisum sativum) [TaxId: 3888]} Back     information, alignment and structure
class: All beta proteins
fold: Supersandwich
superfamily: Amine oxidase catalytic domain
family: Amine oxidase catalytic domain
domain: Copper amine oxidase, domain 3
species: Pea seedling (Pisum sativum) [TaxId: 3888]

Probab=100.00  E-value=3.2e-124  Score=1004.55  Aligned_cols=370  Identities=59%  Similarity=1.074  Sum_probs=351.1

Q ss_pred             CCCCCCCCCCCCcc-CCCCCeeEEeCcEEeecceEEEEeecCCccceEEccEEecC-CCCcccC----------------
Q 040402          181 LKPPFGPRLNSVTT-LPTGPGFKIDGNTVKWANWVFNVGFDARVGTIISTASIYDV-DMHKYRR----------------  242 (567)
Q Consensus       181 ~~~~~r~~~kP~~i-qPeG~sf~v~g~~V~w~~W~f~~~f~~reGl~L~~v~~~d~-r~~~~R~----------------  242 (567)
                      +++++|+++||++| ||||+||+|+|++|+||+|+|++|||+||||+||||+|+|+ ++.++|+                
T Consensus         4 ~~p~~~~~~kp~~i~QPeG~sf~v~g~~V~W~~W~f~v~f~~r~GlvL~~v~~~D~~~~~gr~I~yrlsl~Em~vpY~dp   83 (441)
T d1w2za1           4 QSPPFGPKQHSLTSHQPQGPGFQINGHSVSWANWKFHIGFDVRAGIVISLASIYDLEKHKSRRVLYKGYISELFVPYQDP   83 (441)
T ss_dssp             CCSCCCCCCCCCEEECTTCCSEEEETTEEEETTEEEEEEEETTTEEEEEEEEEEETTTTEEEEEEEEEEEEEEEEEBCCC
T ss_pred             cCCCCCCCCCCceeECCCCCCEEEeCCEEEeCCCEEEEEecCCCcceEEeeEEeeccCCCceEEEEEeeeeeeEEeCCCC
Confidence            46678999999999 99999999999999999999999999999999999999997 6666555                


Q ss_pred             -------------------------CCCCCCCCcEEeeeEEEcCCCceeEeCcceEEeeecCCCccccccccCCCCc-ee
Q 040402          243 -------------------------PLKDCPPNAVFIDGYFTSQDGAPIQTPNAICIFERHTGDVMWRHTEAEMPGD-VR  296 (567)
Q Consensus       243 -------------------------~G~DCpg~a~YlD~~~~~~~g~p~~~~naiCi~E~d~~g~l~kH~~~~~~~~-~~  296 (567)
                                               +|||||++|+|||+++.+++|+|++++|||||||+| +|++|||++++.++. +.
T Consensus        84 ~~~~~~k~~~D~g~yG~G~~a~~L~~G~DCpg~a~y~d~~~~~~~g~p~~~~naiCifE~d-~G~~~kH~~~~~~~~~~~  162 (441)
T d1w2za1          84 TEEFYFKTFFDSGEFGFGLSTVSLIPNRDCPPHAQFIDTYVHSANGTPILLKNAICVFEQY-GNIMWRHTENGIPNESIE  162 (441)
T ss_dssp             STTTTTCEECHHHHHCTTTTBCCCCTTTTSCTTCEEEEEEEECTTSCEEEEEEEEEEEEEC-CCEEEEEEECCSTTCCEE
T ss_pred             CchhhhceeEcccCccccccccccccCCCCCCCCEEcceEEECCCCCEEeccCeEEEEecc-CCceeeeecccCCCcceE
Confidence                                     899999999999999999999999999999999999 679999999988777 78


Q ss_pred             eeeeceEEEEEEEEEeeccceEEEEEEeeCccEEEEEEEeeeEEeecccc--------ccCCCCccccCCcccccccEEE
Q 040402          297 EVRPEVSLVVRMVATVGNYDYVIDWEFKPSGSIKLGCKVRPVEYTHIDQI--------KEDQQGKLVADNTIGVNHDHFL  368 (567)
Q Consensus       297 ~~r~~~~LVvr~i~TVgNYdYi~~~~F~~dGtIe~~v~v~atg~~~~~~~--------~~~~yG~~V~~~~~a~~HqH~f  368 (567)
                      ++|++++||||+|+|||||||||+|+|||||+||++|  +||||+++...        ++..||++|+|+++|++|||+|
T Consensus       163 ~~r~~~~LVvr~i~TVgNYdYi~~~~F~~dGtIe~eV--~aTGil~~~~~~~~~~~~~~~~~yGt~v~p~v~g~~HqH~f  240 (441)
T d1w2za1         163 ESRTEVNLIVRTIVTVGNYDNVIDWEFKASGSIKPSI--ALSGILEIKGTNIKHKDEIKEDLHGKLVSANSIGIYHDHFY  240 (441)
T ss_dssp             EEEECCEEEEEEEEEETTEEEEEEEEECTTSCEEEEE--EEEECCCEEECSCCSGGGCCSCCSEEEEETTEEEECEEEEE
T ss_pred             eeecceeEEEEEEEEecceeEEEEEEEecCceEEEEE--EeeeEEEEeeecccccCccccCCcceeeccCccccceeeEE
Confidence            8999999999999999999999999999999999987  99999986443        2356999999999999999999


Q ss_pred             eeeeeecccCCCCeEEEEEE----------------EEEEEeeeChHhHhhccCCCCcEEEEEcCCCCCCCCCceeEEEe
Q 040402          369 NYYLDLDIDGYANSFEKTKL----------------TVEKETAKTEFEARLKLDTKPMEFAMVNPNKKTKIGHPVGYRLL  432 (567)
Q Consensus       369 ~~RlD~dIdG~~Nsv~~~d~----------------~~~~~~~~tE~~a~~~~~~~~r~~~i~N~~~~N~~G~p~gYkl~  432 (567)
                      ||||||||||++|||++.|+                +++++++++|.+|++.++..+|+|+|+|++++|++|+|+||||+
T Consensus       241 ~~RlD~dIdG~~Nsv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~a~~~~~~~~~~~~v~N~~~~N~~G~p~gYkL~  320 (441)
T d1w2za1         241 IYYLDFDIDGTHNSFEKTSLKTVRIKDGSSKRKSYWTTETQTAKTESDAKITIGLAPAELVVVNPNIKTAVGNEVGYRLI  320 (441)
T ss_dssp             EEEEEECTTSSCBEEEEEEEEEEECCSSSCSCSEEEEEEEEECCBGGGGCBCTTSSCEEEEEEEEEEECTTSCEEEEEEE
T ss_pred             EEEEecccCCCCCceEEEEeEeccCCCCCCCCcceEEEEEEEeechhhhhhccCcCcceEEEeCCCccCcCCCceeEEEc
Confidence            99999999999999999988                56778888898888888778899999999999999999999999


Q ss_pred             cCCCcCCCCCCCCcccccccccceeeEEeecCCCCCCCCCcCccCCCCCCChhhhccCCCceeeCCeEEEEEeccccCCC
Q 040402          433 PGLVVGPLLTDDDYPQIRAGFTDYNIWVTPYNKSEKYSGGNYVDQSHGDDTLLQWTDGNREIENKDIVLWYTMGIHHAPC  512 (567)
Q Consensus       433 p~~~~~~l~~~~s~~~~ra~fa~~~lwVT~y~~~E~~asg~y~~q~~~~~~l~~~~~~~e~i~~~DiV~W~t~G~~H~Pr  512 (567)
                      |++++++++.++|+..+||+||+|+||||||+|+|+||||+|++|+.++++|+.|+++||+|+|||||+|+|||+||+||
T Consensus       321 p~~~~~~l~~~~s~~~~ra~fa~~~lwVT~y~d~E~~aag~y~~q~~~~~gl~~~~~~~~~i~~~DiV~W~t~G~~H~Pr  400 (441)
T d1w2za1         321 PAIPAHPLLTEDDYPQIRGAFTNYNVWVTAYNRTEKWAGGLYVDHSRGDDTLAVWTKQNREIVNKDIVMWHVVGIHHVPA  400 (441)
T ss_dssp             CCSCCCCCSCTTSHHHHHTGGGGCSEEEEECCTTCCCTTCSCCBTCCSTTSHHHHGGGCCBCSSBCEEEEEEEEEEECCC
T ss_pred             cCCCCcccCCCCchhhhhhhhhhCcEEEecCCccccCcCCCCcccCCCCCCccchhcCCCcccCCCEEEEEeCCcccCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCccceeeeEEEEeCCCCCCCCcccCCCCCCCCCCCC
Q 040402          513 QEDFPVMPTVSGGFELRPTNFFEYNPVLKVIPPKHVQWPNC  553 (567)
Q Consensus       513 ~ED~Pvmp~~~~~f~L~P~nFFd~nP~ldvp~~~~~~~~~~  553 (567)
                      +|||||||++++||+|||+|||++||+||+|++.+...++|
T Consensus       401 ~ED~Pvmp~~~~gf~L~P~nFF~~nPald~~~~~~~~~~~~  441 (441)
T d1w2za1         401 QEDFPIMPLLSTSFELRPTNFFERNPVLKTLSPRDVAWPGC  441 (441)
T ss_dssp             GGGSSSCCCEEEECEEEEESSSSSCTTTTCCCCCCCCTTCC
T ss_pred             hhhcCCcceeeeeEEEECCCCCCCCCccCCCCcccccCCCC
Confidence            99999999999999999999999999999999999999998
>d1w6ga1 b.30.2.1 (A:212-628) Copper amine oxidase, domain 3 {Arthrobacter globiformis [TaxId: 1665]} Back     information, alignment and structure
>d2oqea1 b.30.2.1 (A:237-672) Copper amine oxidase, domain 3 {Yeast (Hansenula polymorpha) [TaxId: 4905]} Back     information, alignment and structure
>d1d6za1 b.30.2.1 (A:301-724) Copper amine oxidase, domain 3 {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1w7ca1 b.30.2.1 (A:316-775) Lysyl oxidase PplO, domain 3 {Yeast (Pichia pastoris) [TaxId: 4922]} Back     information, alignment and structure
>d1w2za3 d.17.2.1 (A:99-206) Copper amine oxidase, domains 1 and 2 {Pea seedling (Pisum sativum) [TaxId: 3888]} Back     information, alignment and structure
>d1w6ga3 d.17.2.1 (A:97-211) Copper amine oxidase, domains 1 and 2 {Arthrobacter globiformis [TaxId: 1665]} Back     information, alignment and structure
>d2oqea3 d.17.2.1 (A:116-236) Copper amine oxidase, domains 1 and 2 {Yeast (Hansenula polymorpha) [TaxId: 4905]} Back     information, alignment and structure
>d1d6za3 d.17.2.1 (A:186-300) Copper amine oxidase, domains 1 and 2 {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2oqea2 d.17.2.1 (A:18-115) Copper amine oxidase, domains 1 and 2 {Yeast (Hansenula polymorpha) [TaxId: 4905]} Back     information, alignment and structure
>d1d6za2 d.17.2.1 (A:91-185) Copper amine oxidase, domains 1 and 2 {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1w2za2 d.17.2.1 (A:6-98) Copper amine oxidase, domains 1 and 2 {Pea seedling (Pisum sativum) [TaxId: 3888]} Back     information, alignment and structure
>d1w6ga2 d.17.2.1 (A:9-96) Copper amine oxidase, domains 1 and 2 {Arthrobacter globiformis [TaxId: 1665]} Back     information, alignment and structure
>d1w7ca2 d.17.2.1 (A:43-169) Lysyl oxidase PplO, domains 1 and 2 {Yeast (Pichia pastoris) [TaxId: 4922]} Back     information, alignment and structure
>d1w7ca3 d.17.2.1 (A:170-315) Lysyl oxidase PplO, domains 1 and 2 {Yeast (Pichia pastoris) [TaxId: 4922]} Back     information, alignment and structure