Citrus Sinensis ID: 040421
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 407 | 2.2.26 [Sep-21-2011] | |||||||
| Q9SDZ9 | 465 | Purple acid phosphatase 2 | N/A | no | 0.977 | 0.855 | 0.753 | 0.0 | |
| Q09131 | 464 | Purple acid phosphatase O | no | no | 0.977 | 0.857 | 0.741 | 0.0 | |
| Q38924 | 469 | Fe(3+)-Zn(2+) purple acid | yes | no | 0.975 | 0.846 | 0.727 | 1e-180 | |
| Q9SIV9 | 468 | Purple acid phosphatase 1 | no | no | 0.990 | 0.861 | 0.719 | 1e-178 | |
| Q9SE00 | 473 | Purple acid phosphatase 1 | N/A | no | 0.972 | 0.837 | 0.705 | 1e-172 | |
| P80366 | 432 | Fe(3+)-Zn(2+) purple acid | N/A | no | 0.977 | 0.921 | 0.693 | 1e-169 | |
| Q9C510 | 466 | Purple acid phosphatase 6 | no | no | 0.997 | 0.871 | 0.627 | 1e-153 | |
| O23244 | 466 | Purple acid phosphatase 2 | no | no | 0.985 | 0.860 | 0.628 | 1e-152 | |
| Q9C927 | 396 | Purple acid phosphatase 5 | no | no | 0.918 | 0.944 | 0.611 | 1e-142 | |
| Q93WP4 | 481 | Phosphoenolpyruvate phosp | N/A | no | 0.968 | 0.819 | 0.601 | 1e-139 |
| >sp|Q9SDZ9|PPAF2_IPOBA Purple acid phosphatase 2 OS=Ipomoea batatas GN=PAP2 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 651 bits (1679), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 300/398 (75%), Positives = 343/398 (86%)
Query: 1 VHITQGDHEGKGVIVSWVTPDEPGSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHH 60
VHITQGDH GK +IVSWVT DEPGS+ V+YW+ENS K+ A G + TY YFNYTS IHH
Sbjct: 59 VHITQGDHVGKAMIVSWVTVDEPGSSKVVYWSENSQHKKVARGNIRTYTYFNYTSGYIHH 118
Query: 61 CTIEDLEFDTKYYYEVGVGNATRQFSFTTPPGVGPDVPYTFGLIGDLGQTYYSNRTLTHY 120
CTI +LE++TKYYYEVG+GN TR F FTTPP VGPDVPYTFGLIGDLGQ++ SNRTLTHY
Sbjct: 119 CTIRNLEYNTKYYYEVGIGNTTRSFWFTTPPEVGPDVPYTFGLIGDLGQSFDSNRTLTHY 178
Query: 121 ELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHEIDFAPQ 180
E NPIKGQ VLFVGDLSYAD+YP HDN RWDTWGRF+ER+ AYQPWIWT GNHEIDFAP+
Sbjct: 179 ERNPIKGQAVLFVGDLSYADNYPNHDNVRWDTWGRFVERSTAYQPWIWTAGNHEIDFAPE 238
Query: 181 LGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRRASAHIIVMSCYSAFGKYTPQYKWLEKE 240
+GE PFKPF R+H+PY+A ST FWY I+RASA+IIV+S YSA+GKYTPQYKWLE+E
Sbjct: 239 IGETKPFKPFTKRYHVPYKASGSTETFWYPIKRASAYIIVLSSYSAYGKYTPQYKWLEEE 298
Query: 241 FPKVNRSETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAYER 300
PKVNR+ETPWLIVLMH P YNSY +HYMEGE MRV+YEPWFV++KVD+VFA HVHAYER
Sbjct: 299 LPKVNRTETPWLIVLMHSPWYNSYNYHYMEGETMRVMYEPWFVQHKVDLVFAGHVHAYER 358
Query: 301 SERMSNIAYNVTNALCSPVSDQSAPVYITIGDGGNQEGLAKEMTEPQPRYSAYREASFGH 360
SER+SN+AY++ N C+PV DQSAPVYITIGDGGN EGLA MT+PQP YSA+REASFGH
Sbjct: 359 SERVSNVAYDIVNGKCTPVRDQSAPVYITIGDGGNLEGLATNMTDPQPEYSAFREASFGH 418
Query: 361 GILDVKNRTHAYFGWHRNQDDYAVEADSVWLHNRYWKP 398
LD+KNRTHAY+ WHRNQD YAVEADS+W+ NR+W P
Sbjct: 419 ATLDIKNRTHAYYSWHRNQDGYAVEADSMWVSNRFWHP 456
|
Ipomoea batatas (taxid: 4120) EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 2 |
| >sp|Q09131|PPAF_SOYBN Purple acid phosphatase OS=Glycine max GN=PAP PE=1 SV=2 | Back alignment and function description |
|---|
Score = 638 bits (1646), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 295/398 (74%), Positives = 342/398 (85%)
Query: 1 VHITQGDHEGKGVIVSWVTPDEPGSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHH 60
VHITQGD GK VIVSWVT DEPGS+ V YW+ENS K+ A G ++TY +FNY+S IHH
Sbjct: 57 VHITQGDLVGKAVIVSWVTVDEPGSSEVHYWSENSDKKKIAEGKLVTYRFFNYSSGFIHH 116
Query: 61 CTIEDLEFDTKYYYEVGVGNATRQFSFTTPPGVGPDVPYTFGLIGDLGQTYYSNRTLTHY 120
TI +LE+ TKYYYEVG+GN TRQF F TPP +GPDVPYTFGLIGDLGQ++ SN+TL+HY
Sbjct: 117 TTIRNLEYKTKYYYEVGLGNTTRQFWFVTPPEIGPDVPYTFGLIGDLGQSFDSNKTLSHY 176
Query: 121 ELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHEIDFAPQ 180
ELNP KGQTVLFVGDLSYAD+YP HDN RWD+WGRF ER+ AYQPWIWT GNHE FAP+
Sbjct: 177 ELNPRKGQTVLFVGDLSYADNYPNHDNIRWDSWGRFTERSVAYQPWIWTAGNHENHFAPE 236
Query: 181 LGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRRASAHIIVMSCYSAFGKYTPQYKWLEKE 240
+GE +PFKP+ +R+H+PY+A ST+PFWYSI+RASAHIIV++ YSA+GKYTPQYKWLEKE
Sbjct: 237 IGETVPFKPYTHRYHVPYKASQSTSPFWYSIKRASAHIIVLASYSAYGKYTPQYKWLEKE 296
Query: 241 FPKVNRSETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAYER 300
PKVNR+ETPWLIVLMH P YNSY +HYMEGE MRV+YEPWFV+YKVDVVFA HVHAYER
Sbjct: 297 LPKVNRTETPWLIVLMHSPWYNSYNYHYMEGETMRVMYEPWFVQYKVDVVFAGHVHAYER 356
Query: 301 SERMSNIAYNVTNALCSPVSDQSAPVYITIGDGGNQEGLAKEMTEPQPRYSAYREASFGH 360
SER+SN+AYN+ N LC+PV+D+SAPVYITIGDGG EGLA MTEPQP+YSA+REASFGH
Sbjct: 357 SERVSNVAYNIVNGLCAPVNDKSAPVYITIGDGGTLEGLATNMTEPQPKYSAFREASFGH 416
Query: 361 GILDVKNRTHAYFGWHRNQDDYAVEADSVWLHNRYWKP 398
I D+ NRTHA++ WHRNQD AVEADS+W NRYW P
Sbjct: 417 AIFDITNRTHAHYSWHRNQDGVAVEADSLWSFNRYWHP 454
|
Glycine max (taxid: 3847) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q38924|PPA12_ARATH Fe(3+)-Zn(2+) purple acid phosphatase 12 OS=Arabidopsis thaliana GN=PAP12 PE=2 SV=3 | Back alignment and function description |
|---|
Score = 632 bits (1630), Expect = e-180, Method: Compositional matrix adjust.
Identities = 289/397 (72%), Positives = 334/397 (84%)
Query: 1 VHITQGDHEGKGVIVSWVTPDEPGSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHH 60
VH+TQG+HEG GVI+SWVTP +PGS TV YW EN ++QA V TY +FNYTS IHH
Sbjct: 63 VHVTQGNHEGNGVIISWVTPVKPGSKTVQYWCENEKSRKQAEATVNTYRFFNYTSGYIHH 122
Query: 61 CTIEDLEFDTKYYYEVGVGNATRQFSFTTPPGVGPDVPYTFGLIGDLGQTYYSNRTLTHY 120
C I+DLEFDTKYYYE+G G +R+F F PP GPDVPYTFGLIGDLGQTY SN TL+HY
Sbjct: 123 CLIDDLEFDTKYYYEIGSGKWSRRFWFFIPPKSGPDVPYTFGLIGDLGQTYDSNSTLSHY 182
Query: 121 ELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHEIDFAPQ 180
E+NP KGQ VLFVGDLSYAD YP HDNNRWDTWGRF+ER+ AYQPWIWT GNHEIDF P
Sbjct: 183 EMNPGKGQAVLFVGDLSYADRYPNHDNNRWDTWGRFVERSVAYQPWIWTAGNHEIDFVPD 242
Query: 181 LGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRRASAHIIVMSCYSAFGKYTPQYKWLEKE 240
+GE PFKPF NR+H P++A S +P WYSI+RASA+IIVMSCYS++G YTPQYKWLEKE
Sbjct: 243 IGEIEPFKPFMNRYHTPHKASGSISPLWYSIKRASAYIIVMSCYSSYGIYTPQYKWLEKE 302
Query: 241 FPKVNRSETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAYER 300
VNR+ETPWLIVL+H P Y+SYVHHYMEGE +RV+YE WFV+YKVDVVFA HVHAYER
Sbjct: 303 LQGVNRTETPWLIVLVHSPFYSSYVHHYMEGETLRVMYEQWFVKYKVDVVFAGHVHAYER 362
Query: 301 SERMSNIAYNVTNALCSPVSDQSAPVYITIGDGGNQEGLAKEMTEPQPRYSAYREASFGH 360
SER+SNIAYN+ N LC P+SD+SAP+YITIGDGGN EGL +M +PQP+YSA+REASFGH
Sbjct: 363 SERVSNIAYNIVNGLCEPISDESAPIYITIGDGGNSEGLLTDMMQPQPKYSAFREASFGH 422
Query: 361 GILDVKNRTHAYFGWHRNQDDYAVEADSVWLHNRYWK 397
G+L++KNRTHAYF W+RNQD AV ADSVWL NR+W+
Sbjct: 423 GLLEIKNRTHAYFSWNRNQDGNAVAADSVWLLNRFWR 459
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q9SIV9|PPA10_ARATH Purple acid phosphatase 10 OS=Arabidopsis thaliana GN=PAP10 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 624 bits (1609), Expect = e-178, Method: Compositional matrix adjust.
Identities = 290/403 (71%), Positives = 334/403 (82%)
Query: 1 VHITQGDHEGKGVIVSWVTPDEPGSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHH 60
VHITQGD EGK VIVSWVT + GSN V+YW ENST K +AHG TY ++NYTS IHH
Sbjct: 62 VHITQGDVEGKAVIVSWVTQEAKGSNKVIYWKENSTKKHKAHGKTNTYKFYNYTSGFIHH 121
Query: 61 CTIEDLEFDTKYYYEVGVGNATRQFSFTTPPGVGPDVPYTFGLIGDLGQTYYSNRTLTHY 120
C I +LE+DTKYYY +GVG R+F F TPP +GPDVPYTFGLIGDLGQ+Y SN TLTHY
Sbjct: 122 CPIRNLEYDTKYYYVLGVGQTERKFWFFTPPEIGPDVPYTFGLIGDLGQSYDSNITLTHY 181
Query: 121 ELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHEIDFAPQ 180
E NP KGQ VLFVGD+SYAD YP HDN RWD+WGRF ER+ AYQPWIWT GNHE+DFAP+
Sbjct: 182 ENNPTKGQAVLFVGDISYADTYPDHDNRRWDSWGRFAERSTAYQPWIWTTGNHELDFAPE 241
Query: 181 LGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRRASAHIIVMSCYSAFGKYTPQYKWLEKE 240
+GE PFKPF +R+ PYR+ ST PFWYSI+R A+IIV++ YSA+GKYTPQY+WLE+E
Sbjct: 242 IGENRPFKPFTHRYRTPYRSSGSTEPFWYSIKRGPAYIIVLASYSAYGKYTPQYQWLEEE 301
Query: 241 FPKVNRSETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAYER 300
FPKVNR+ETPWLIVLMH P YNSY +HYMEGE MRV+YE WFV+YKVDVVFA HVHAYER
Sbjct: 302 FPKVNRTETPWLIVLMHSPWYNSYDYHYMEGETMRVMYEAWFVKYKVDVVFAGHVHAYER 361
Query: 301 SERMSNIAYNVTNALCSPVSDQSAPVYITIGDGGNQEGLAKEMTEPQPRYSAYREASFGH 360
SER+SNIAYNV N +C+PV DQSAPVYITIGDGGN EGLA +MTEPQP+YSA+REASFGH
Sbjct: 362 SERVSNIAYNVVNGICTPVKDQSAPVYITIGDGGNIEGLATKMTEPQPKYSAFREASFGH 421
Query: 361 GILDVKNRTHAYFGWHRNQDDYAVEADSVWLHNRYWKPSGELP 403
I +KNRTHA++GWHRN D YAVE D +W +NR+W P + P
Sbjct: 422 AIFSIKNRTHAHYGWHRNHDGYAVEGDRMWFYNRFWHPVDDSP 464
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q9SE00|PPAF1_IPOBA Purple acid phosphatase 1 OS=Ipomoea batatas GN=PAP1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 605 bits (1560), Expect = e-172, Method: Compositional matrix adjust.
Identities = 280/397 (70%), Positives = 329/397 (82%), Gaps = 1/397 (0%)
Query: 1 VHITQGDHEGKGVIVSWVTP-DEPGSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIH 59
VHITQGD+EG+GVI+SW TP D+ G+N V+YW+ENS +++A G V+TY Y+NYTS IH
Sbjct: 66 VHITQGDYEGRGVIISWTTPYDKAGANKVVYWSENSKSQKRAMGTVVTYKYYNYTSAFIH 125
Query: 60 HCTIEDLEFDTKYYYEVGVGNATRQFSFTTPPGVGPDVPYTFGLIGDLGQTYYSNRTLTH 119
HCTI+DLE+DTKYYY +G G+A RQF F TPP GPDVPY FGLIGD+GQT+ SN TLTH
Sbjct: 126 HCTIKDLEYDTKYYYRLGFGDAKRQFWFVTPPKPGPDVPYVFGLIGDIGQTHDSNTTLTH 185
Query: 120 YELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHEIDFAP 179
YE N KGQ VLF+GDLSY++ +P HDNNRWDTWGRF ER+ AYQPWIWT GNHEID+AP
Sbjct: 186 YEQNSAKGQAVLFMGDLSYSNRWPNHDNNRWDTWGRFSERSVAYQPWIWTAGNHEIDYAP 245
Query: 180 QLGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRRASAHIIVMSCYSAFGKYTPQYKWLEK 239
+GE PF PF NR+ P+ A S P WY+I+RASAHIIV+S YS F KY+PQYKW
Sbjct: 246 DIGEYQPFVPFTNRYPTPHEASGSGDPLWYAIKRASAHIIVLSSYSGFVKYSPQYKWFTS 305
Query: 240 EFPKVNRSETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAYE 299
E KVNRSETPWLIVL+H PLYNSY HYMEGE MR ++EP+FV YKVD+VF+ HVH+YE
Sbjct: 306 ELEKVNRSETPWLIVLVHAPLYNSYEAHYMEGEAMRAIFEPYFVYYKVDIVFSGHVHSYE 365
Query: 300 RSERMSNIAYNVTNALCSPVSDQSAPVYITIGDGGNQEGLAKEMTEPQPRYSAYREASFG 359
RSER+SN+AYN+ NA C+PVSD+SAPVYITIGDGGN EGLA EMT+PQP YSA+REASFG
Sbjct: 366 RSERVSNVAYNIVNAKCTPVSDESAPVYITIGDGGNSEGLASEMTQPQPSYSAFREASFG 425
Query: 360 HGILDVKNRTHAYFGWHRNQDDYAVEADSVWLHNRYW 396
HGI D+KNRTHA+F WHRNQD +VEADS+WL NRYW
Sbjct: 426 HGIFDIKNRTHAHFSWHRNQDGASVEADSLWLLNRYW 462
|
Ipomoea batatas (taxid: 4120) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|P80366|PPAF_PHAVU Fe(3+)-Zn(2+) purple acid phosphatase OS=Phaseolus vulgaris PE=1 SV=2 | Back alignment and function description |
|---|
Score = 593 bits (1530), Expect = e-169, Method: Compositional matrix adjust.
Identities = 276/398 (69%), Positives = 324/398 (81%)
Query: 1 VHITQGDHEGKGVIVSWVTPDEPGSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHH 60
VHITQGD G+ +I+SWVT DEPGS+ V YW+E + K+ A G + TY +FNY+S IHH
Sbjct: 30 VHITQGDLVGRAMIISWVTMDEPGSSAVRYWSEKNGRKRIAKGKMSTYRFFNYSSGFIHH 89
Query: 61 CTIEDLEFDTKYYYEVGVGNATRQFSFTTPPGVGPDVPYTFGLIGDLGQTYYSNRTLTHY 120
TI L+++TKYYYEVG+ N TR+FSF TPP G DVPYTFGLIGDLGQ++ SN TL+HY
Sbjct: 90 TTIRKLKYNTKYYYEVGLRNTTRRFSFITPPQTGLDVPYTFGLIGDLGQSFDSNTTLSHY 149
Query: 121 ELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHEIDFAPQ 180
EL+P KGQTVLFVGDLSYAD YP HDN RWDTWGRF ER+ AYQPWIWT GNHEI+FAP+
Sbjct: 150 ELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTERSVAYQPWIWTAGNHEIEFAPE 209
Query: 181 LGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRRASAHIIVMSCYSAFGKYTPQYKWLEKE 240
+ E PFKPF+ R+H+PY A ST+PFWYSI+RASAHIIV+S + A+G+ TPQY WL+KE
Sbjct: 210 INETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHIIVLSSHIAYGRGTPQYTWLKKE 269
Query: 241 FPKVNRSETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAYER 300
KV RSETPWLIVLMH PLYNSY HH+MEGE MR +E WFV+YKVDVVFA HVHAYER
Sbjct: 270 LRKVKRSETPWLIVLMHSPLYNSYNHHFMEGEAMRTKFEAWFVKYKVDVVFAGHVHAYER 329
Query: 301 SERMSNIAYNVTNALCSPVSDQSAPVYITIGDGGNQEGLAKEMTEPQPRYSAYREASFGH 360
SER+SNIAY +T+ LC+PV DQSAPVYITIGD GN + M +PQP YSA+REASFGH
Sbjct: 330 SERVSNIAYKITDGLCTPVKDQSAPVYITIGDAGNYGVIDSNMIQPQPEYSAFREASFGH 389
Query: 361 GILDVKNRTHAYFGWHRNQDDYAVEADSVWLHNRYWKP 398
G+ D+KNRTHA+F W+RNQD AVEADSVW NR+W P
Sbjct: 390 GMFDIKNRTHAHFSWNRNQDGVAVEADSVWFFNRHWYP 427
|
Phaseolus vulgaris (taxid: 3885) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q9C510|PPA6_ARATH Purple acid phosphatase 6 OS=Arabidopsis thaliana GN=PAP6 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 542 bits (1397), Expect = e-153, Method: Compositional matrix adjust.
Identities = 259/413 (62%), Positives = 316/413 (76%), Gaps = 7/413 (1%)
Query: 1 VHITQGDHEGKGVIVSWVTP-DEPGSNTVLYW-AENST----LKQQAHGIVLTYNYFNYT 54
VH+TQGDH+G+G+IVSWVTP + GSN V YW A N + K++AH +Y +++Y+
Sbjct: 53 VHLTQGDHDGRGMIVSWVTPLNLAGSNVVTYWIATNGSDVKPAKKRAHASTKSYRFYDYS 112
Query: 55 SNCIHHCTIEDLEFDTKYYYEVGVGNATRQFSFTTPPGVGPDVPYTFGLIGDLGQTYYSN 114
S +HH TI+ LE+DTKY YEVG + RQFSFTTPP +GPDVPYTFG+IGDLGQTY SN
Sbjct: 113 SGFLHHATIKGLEYDTKYIYEVGTDKSVRQFSFTTPPKIGPDVPYTFGIIGDLGQTYASN 172
Query: 115 RTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHE 174
TL HY NP KGQ VLF GDLSYADD+P HD +WDTWGRF+E AAYQP+I+ GNHE
Sbjct: 173 ETLYHYMSNP-KGQAVLFAGDLSYADDHPNHDQRKWDTWGRFMEPCAAYQPFIFAAGNHE 231
Query: 175 IDFAPQLGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRRASAHIIVMSCYSAFGKYTPQY 234
IDF P +GE FKP+ +R+ Y+A ST+P WYS+RRASAHIIV+S YSA+GKYTPQY
Sbjct: 232 IDFVPNIGEPHAFKPYTHRYPNAYKASQSTSPLWYSVRRASAHIIVLSSYSAYGKYTPQY 291
Query: 235 KWLEKEFPKVNRSETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAH 294
WLE+E VNR ETPWLIV++H P YNS +HYMEGE MRV++E W V KVD+V + H
Sbjct: 292 IWLEQELKNVNREETPWLIVIVHSPWYNSNNYHYMEGESMRVMFESWLVNSKVDLVLSGH 351
Query: 295 VHAYERSERMSNIAYNVTNALCSPVSDQSAPVYITIGDGGNQEGLAKEMTEPQPRYSAYR 354
VHAYERSER+SNI YN+TN L SPV D +AP+YITIGDGGN EG+A +PQP YSAYR
Sbjct: 352 VHAYERSERISNIKYNITNGLSSPVKDPNAPIYITIGDGGNIEGIANSFVDPQPSYSAYR 411
Query: 355 EASFGHGILDVKNRTHAYFGWHRNQDDYAVEADSVWLHNRYWKPSGELPRAAI 407
EASFGH +L++ NRTHA + WHRNQD+ V ADS+ LHNR++ P E+ + I
Sbjct: 412 EASFGHAVLEIMNRTHAQYTWHRNQDNEPVAADSIMLHNRHFFPVEEIVSSNI 464
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|O23244|PPA25_ARATH Purple acid phosphatase 25 OS=Arabidopsis thaliana GN=PAP25 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 538 bits (1385), Expect = e-152, Method: Compositional matrix adjust.
Identities = 256/407 (62%), Positives = 309/407 (75%), Gaps = 6/407 (1%)
Query: 1 VHITQGDHEGKGVIVSWVTP-DEPGSNTVLYW----AENSTLKQQAHGIVLTYNYFNYTS 55
VHI QGD+ G+G+I+SWVTP + GSN V YW + K++ H +Y +++YTS
Sbjct: 54 VHIVQGDYNGRGIIISWVTPLNLAGSNVVTYWKAVDGDVKPKKKRGHASTSSYRFYDYTS 113
Query: 56 NCIHHCTIEDLEFDTKYYYEVGVGNATRQFSFTTPPGVGPDVPYTFGLIGDLGQTYYSNR 115
+HH TI+ LE+DTKY YEVG + RQFSFT+PP VGPDVPYTFG+IGDLGQT SN
Sbjct: 114 GFLHHATIKGLEYDTKYIYEVGTDGSVRQFSFTSPPKVGPDVPYTFGIIGDLGQTLASNE 173
Query: 116 TLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHEI 175
TL HY NP KGQ VLF GDLSYADD+P HD +WD+WGRF+E AAYQ +I+ GNHEI
Sbjct: 174 TLYHYMSNP-KGQAVLFPGDLSYADDHPNHDQRKWDSWGRFVEPCAAYQTFIYAAGNHEI 232
Query: 176 DFAPQLGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRRASAHIIVMSCYSAFGKYTPQYK 235
DF P +GE FKP+ +R+H Y+A S +P WYSIRRASAHIIV+S YSA+GKYTPQY
Sbjct: 233 DFVPNIGEPHAFKPYIHRYHNAYKASKSISPLWYSIRRASAHIIVLSSYSAYGKYTPQYV 292
Query: 236 WLEKEFPKVNRSETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHV 295
WLE+E KVNR ETPWLIV++H P YNS +HYMEGE MR ++E WFV KVD+V + HV
Sbjct: 293 WLEQELKKVNREETPWLIVMVHSPWYNSNNYHYMEGESMRAMFESWFVNSKVDLVLSGHV 352
Query: 296 HAYERSERMSNIAYNVTNALCSPVSDQSAPVYITIGDGGNQEGLAKEMTEPQPRYSAYRE 355
H+YERSER+SNI YN+TN L PV D SAP+YITIGDGGN EG+A T+PQP YSAYRE
Sbjct: 353 HSYERSERVSNIKYNITNGLSYPVKDPSAPIYITIGDGGNIEGIANSFTDPQPSYSAYRE 412
Query: 356 ASFGHGILDVKNRTHAYFGWHRNQDDYAVEADSVWLHNRYWKPSGEL 402
ASFGH +L++ NRTHAY+ WHRNQD+ V ADS+ LHNRY+ P EL
Sbjct: 413 ASFGHAVLEIYNRTHAYYTWHRNQDNEPVAADSIMLHNRYFFPVEEL 459
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q9C927|PPA5_ARATH Purple acid phosphatase 5 OS=Arabidopsis thaliana GN=PAP5 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 506 bits (1302), Expect = e-142, Method: Compositional matrix adjust.
Identities = 247/404 (61%), Positives = 300/404 (74%), Gaps = 30/404 (7%)
Query: 1 VHITQGDHEGKGVIVSWVTP-DEPGSNTVLYWAENSTLKQQAHGIVLT--YNYFNYTSNC 57
VHITQGDH G+G+I+SWVT +E GSN V YW +S I T Y YF+YTS
Sbjct: 18 VHITQGDHNGRGMIISWVTSLNEDGSNVVTYWIASSDGSDNKSVIATTSSYRYFDYTSGY 77
Query: 58 IHHCTIEDLEFDTKYYYEVGVGNATRQFSFTTPPGVGPDVPYTFGLIGDLGQTYYSNRTL 117
+HH I++LE+ TKY+YE+G G +TRQF+ T PP VGPDVPYTFG+IGDLGQTY SN+TL
Sbjct: 78 LHHAIIKELEYKTKYFYELGTGRSTRQFNLT-PPKVGPDVPYTFGVIGDLGQTYASNQTL 136
Query: 118 THYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHEIDF 177
+Y NP KGQ VLF GDLSYADD+P HD ++WD++GRF+E +AAYQPWIW GNHEID+
Sbjct: 137 YNYMSNP-KGQAVLFAGDLSYADDHPNHDQSKWDSYGRFVEPSAAYQPWIWAAGNHEIDY 195
Query: 178 APQLGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRRASAHIIVMSCYSAFGKYTPQYKWL 237
A +GE PFKP+ NR+H+PYRA + KYTPQ WL
Sbjct: 196 AQSIGETQPFKPYKNRYHVPYRA-------------------------SQNKYTPQNSWL 230
Query: 238 EKEFPKVNRSETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHA 297
+ EF KVNRSETPWLIVL+H P YNS +HYMEGE MRV +EPWFVE KVD+VFA HVHA
Sbjct: 231 QDEFKKVNRSETPWLIVLVHAPWYNSNNYHYMEGESMRVTFEPWFVENKVDIVFAGHVHA 290
Query: 298 YERSERMSNIAYNVTNALCSPVSDQSAPVYITIGDGGNQEGLAKEMTEPQPRYSAYREAS 357
YERSER+SNI YN+T+ + +PV DQ+APVYITIGDGGN EG+A T+PQP YSA+REAS
Sbjct: 291 YERSERVSNIQYNITDGMSTPVKDQNAPVYITIGDGGNIEGIANIFTDPQPSYSAFREAS 350
Query: 358 FGHGILDVKNRTHAYFGWHRNQDDYAVEADSVWLHNRYWKPSGE 401
FGH +L++KNRTHA++ WHRN++D AV ADS+WL NRY+ P E
Sbjct: 351 FGHALLEIKNRTHAHYTWHRNKEDEAVIADSIWLKNRYYLPEEE 394
|
Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 2 |
| >sp|Q93WP4|PEPP_ALLCE Phosphoenolpyruvate phosphatase OS=Allium cepa GN=ACPEPP PE=1 SV=1 | Back alignment and function description |
|---|
Score = 494 bits (1273), Expect = e-139, Method: Compositional matrix adjust.
Identities = 238/396 (60%), Positives = 299/396 (75%), Gaps = 2/396 (0%)
Query: 1 VHITQGDHEGKGVIVSWVTPDEPGSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHH 60
VHITQGD++GK VIVSWVT +PG + V+Y ++ A G Y Y++YTS IHH
Sbjct: 63 VHITQGDYDGKAVIVSWVTFIDPGKSEVVYGTSPNSYDHSAQGKTTNYTYYDYTSGYIHH 122
Query: 61 CTIEDLEFDTKYYYEVGVGNATRQFSFTTPPGVGPDVPYTFGLIGDLGQTYYSNRTLTHY 120
C ++ LE+DTKYYY++G G+A R+F F TPP + PD YTFG+IGDLGQTY S TL HY
Sbjct: 123 CLLDKLEYDTKYYYKIGKGDAAREFWFHTPPQIHPDASYTFGIIGDLGQTYNSLSTLEHY 182
Query: 121 ELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHEIDFAPQ 180
+ KGQTVLFVGDLSYAD Y ++ RWD+WGRF+ER+ AYQPWIWTVGNHEI++ P
Sbjct: 183 MKS--KGQTVLFVGDLSYADRYSCNNGTRWDSWGRFVERSVAYQPWIWTVGNHEIEYRPD 240
Query: 181 LGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRRASAHIIVMSCYSAFGKYTPQYKWLEKE 240
LGE PF+ + NR+ P+ A S++P WYSIRRASAHIIV+S YS F KYTPQ+ WL +E
Sbjct: 241 LGEVFPFRAYLNRYPTPHLASASSSPLWYSIRRASAHIIVLSSYSPFVKYTPQWLWLSEE 300
Query: 241 FPKVNRSETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAYER 300
+V+R +TPWLIVLMH PLYNS HYMEGE MRV +E WFV+YKVD+VFA HVHAYER
Sbjct: 301 LTRVDREKTPWLIVLMHAPLYNSNEAHYMEGESMRVAFESWFVQYKVDLVFAGHVHAYER 360
Query: 301 SERMSNIAYNVTNALCSPVSDQSAPVYITIGDGGNQEGLAKEMTEPQPRYSAYREASFGH 360
S R+SNI YN+T+ P+ D+SAPVYIT+GDGGNQEGLA+ +E QP YSA+RE+S+GH
Sbjct: 361 SYRISNIVYNITSGNRYPIPDKSAPVYITVGDGGNQEGLAERFSESQPDYSAFRESSYGH 420
Query: 361 GILDVKNRTHAYFGWHRNQDDYAVEADSVWLHNRYW 396
L+++NRTHA++ W+RN D + D + N+YW
Sbjct: 421 STLELRNRTHAFYQWNRNDDGKHIPVDRIIFRNQYW 456
|
Phosphoenolpyruvate phosphatase that probably operates in the vacuole to release phosphate from phosphoenolpyruvate (PEP) under phosphorus starvation. Allium cepa (taxid: 4679) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: 6 EC: 0 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 407 | ||||||
| 224085758 | 467 | predicted protein [Populus trichocarpa] | 1.0 | 0.871 | 0.800 | 0.0 | |
| 27597231 | 468 | purple acid phosphatase [Nicotiana tabac | 0.982 | 0.854 | 0.795 | 0.0 | |
| 357601486 | 481 | PAP1 [Gossypium hirsutum] | 0.980 | 0.829 | 0.794 | 0.0 | |
| 225458131 | 467 | PREDICTED: purple acid phosphatase 2 [Vi | 0.972 | 0.847 | 0.800 | 0.0 | |
| 225458133 | 468 | PREDICTED: purple acid phosphatase 2 [Vi | 0.985 | 0.856 | 0.793 | 0.0 | |
| 358248816 | 444 | uncharacterized protein LOC100794124 [Gl | 1.0 | 0.916 | 0.791 | 0.0 | |
| 4210712 | 427 | purple acid phosphatase [Ipomoea batatas | 1.0 | 0.953 | 0.761 | 0.0 | |
| 317106670 | 471 | JHL18I08.7 [Jatropha curcas] | 1.0 | 0.864 | 0.771 | 0.0 | |
| 225427698 | 472 | PREDICTED: purple acid phosphatase 2 iso | 0.985 | 0.849 | 0.773 | 0.0 | |
| 356518396 | 444 | PREDICTED: purple acid phosphatase 2-lik | 0.972 | 0.891 | 0.782 | 0.0 |
| >gi|224085758|ref|XP_002307690.1| predicted protein [Populus trichocarpa] gi|222857139|gb|EEE94686.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 707 bits (1824), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/407 (80%), Positives = 360/407 (88%)
Query: 1 VHITQGDHEGKGVIVSWVTPDEPGSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHH 60
VHITQGDHEGKGVIVSWVTPDEPGS TVLYWAENS LK A G +L Y YFNYTS IHH
Sbjct: 61 VHITQGDHEGKGVIVSWVTPDEPGSKTVLYWAENSELKNSADGFILKYRYFNYTSGYIHH 120
Query: 61 CTIEDLEFDTKYYYEVGVGNATRQFSFTTPPGVGPDVPYTFGLIGDLGQTYYSNRTLTHY 120
CTI+DLEFDTKYYYEVG+GN TRQF F TPP GPDVPYTFGLIGDLGQT+ SNRT+THY
Sbjct: 121 CTIKDLEFDTKYYYEVGIGNTTRQFWFITPPRPGPDVPYTFGLIGDLGQTHDSNRTVTHY 180
Query: 121 ELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHEIDFAPQ 180
ELNP KGQT+LFVGDLSYADDYPFHDN+RWDTWGRF+ER+AAYQPWIWT GNHEIDF P+
Sbjct: 181 ELNPTKGQTLLFVGDLSYADDYPFHDNSRWDTWGRFVERSAAYQPWIWTAGNHEIDFVPE 240
Query: 181 LGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRRASAHIIVMSCYSAFGKYTPQYKWLEKE 240
+GE PFKP+ +R+H+PYRA ST+P WYSI+RASA+IIV+S YSA+GKYTPQYKWLEKE
Sbjct: 241 IGERKPFKPYTHRYHVPYRASGSTSPMWYSIKRASAYIIVLSSYSAYGKYTPQYKWLEKE 300
Query: 241 FPKVNRSETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAYER 300
PKVNR+ETPWLIVLMHCP+YNSY HHYMEGE MRV+YEPWFVE+KVDVVFA HVHAYER
Sbjct: 301 LPKVNRTETPWLIVLMHCPMYNSYAHHYMEGETMRVMYEPWFVEFKVDVVFAGHVHAYER 360
Query: 301 SERMSNIAYNVTNALCSPVSDQSAPVYITIGDGGNQEGLAKEMTEPQPRYSAYREASFGH 360
SER+SN+AYN+ N LC+P+ DQSAP+YITIGDGGN EGL MTEPQP YSA+RE SFGH
Sbjct: 361 SERISNVAYNIVNGLCAPIRDQSAPIYITIGDGGNLEGLVTSMTEPQPSYSAFREPSFGH 420
Query: 361 GILDVKNRTHAYFGWHRNQDDYAVEADSVWLHNRYWKPSGELPRAAI 407
GILD+KNRTHAYFGWHRNQD YAVEADSVWLHNR+W P AA+
Sbjct: 421 GILDIKNRTHAYFGWHRNQDGYAVEADSVWLHNRFWNPLRASSVAAL 467
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|27597231|dbj|BAC55156.1| purple acid phosphatase [Nicotiana tabacum] | Back alignment and taxonomy information |
|---|
Score = 687 bits (1772), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/400 (79%), Positives = 353/400 (88%)
Query: 1 VHITQGDHEGKGVIVSWVTPDEPGSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHH 60
V+ITQGDHEGKGVI SW TPDEPGSN+VLYWAENS +K A G V++Y Y+NYTS IHH
Sbjct: 63 VYITQGDHEGKGVIASWTTPDEPGSNSVLYWAENSNVKSSAEGFVVSYRYYNYTSGYIHH 122
Query: 61 CTIEDLEFDTKYYYEVGVGNATRQFSFTTPPGVGPDVPYTFGLIGDLGQTYYSNRTLTHY 120
CTI+DLEFDTKYYYEVG+ N TR+F F TPP GPDVPYTFGLIGDLGQTY SN TLTHY
Sbjct: 123 CTIKDLEFDTKYYYEVGLENTTRKFWFVTPPKPGPDVPYTFGLIGDLGQTYDSNSTLTHY 182
Query: 121 ELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHEIDFAPQ 180
ELNP+KGQT+LFVGDLSYAD+YPFH+N RWDTWGRFIER+AAYQPWIWT GNHE+DF P+
Sbjct: 183 ELNPLKGQTMLFVGDLSYADNYPFHNNIRWDTWGRFIERSAAYQPWIWTAGNHELDFVPE 242
Query: 181 LGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRRASAHIIVMSCYSAFGKYTPQYKWLEKE 240
+GE+ PF P+ +RF PYR ST+P WYSI+RASA+IIVMS YSAFG YTPQ+KWL+ E
Sbjct: 243 IGESKPFLPYKHRFSTPYRVSDSTSPLWYSIKRASAYIIVMSSYSAFGTYTPQWKWLKNE 302
Query: 241 FPKVNRSETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAYER 300
PKVNRSETPWLIVLMHCP+Y+SYVHHYMEGE MRV+YEPWFV YKVDVVFA HVHAYER
Sbjct: 303 LPKVNRSETPWLIVLMHCPMYSSYVHHYMEGETMRVMYEPWFVNYKVDVVFAGHVHAYER 362
Query: 301 SERMSNIAYNVTNALCSPVSDQSAPVYITIGDGGNQEGLAKEMTEPQPRYSAYREASFGH 360
SER+SN+AYN+ N CSPV D+SAPVYITIGDGGNQEGLA EMT+PQPRYSAYREASFGH
Sbjct: 363 SERISNVAYNIINRKCSPVRDESAPVYITIGDGGNQEGLATEMTQPQPRYSAYREASFGH 422
Query: 361 GILDVKNRTHAYFGWHRNQDDYAVEADSVWLHNRYWKPSG 400
GILD+KNRTHAYFGWHRN D YAVEADS+WL NRYWK G
Sbjct: 423 GILDIKNRTHAYFGWHRNNDGYAVEADSLWLFNRYWKLDG 462
|
Source: Nicotiana tabacum Species: Nicotiana tabacum Genus: Nicotiana Family: Solanaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357601486|gb|AET86953.1| PAP1 [Gossypium hirsutum] | Back alignment and taxonomy information |
|---|
Score = 686 bits (1771), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/399 (79%), Positives = 349/399 (87%)
Query: 1 VHITQGDHEGKGVIVSWVTPDEPGSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHH 60
VHITQGDH G VIVSWVTPDEPGSN+V YWAENS LK A GIVLTY YFNYTS IHH
Sbjct: 64 VHITQGDHLGNAVIVSWVTPDEPGSNSVFYWAENSELKNSAQGIVLTYKYFNYTSGFIHH 123
Query: 61 CTIEDLEFDTKYYYEVGVGNATRQFSFTTPPGVGPDVPYTFGLIGDLGQTYYSNRTLTHY 120
CTI DLEFDTKYYYEVG+GN++R+F F TPP +GPDVPYTFGLIGDLGQT+ SN TLTHY
Sbjct: 124 CTIRDLEFDTKYYYEVGIGNSSRRFWFVTPPAIGPDVPYTFGLIGDLGQTHDSNSTLTHY 183
Query: 121 ELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHEIDFAPQ 180
ELNP KGQT+LF+GDLSYAD YPFHDN RWDTWGRFIERNAAYQPWIWT GNHEID P
Sbjct: 184 ELNPAKGQTLLFLGDLSYADAYPFHDNARWDTWGRFIERNAAYQPWIWTAGNHEIDVVPA 243
Query: 181 LGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRRASAHIIVMSCYSAFGKYTPQYKWLEKE 240
+ EAIPFKP+ +R+H+PY A ST+P WYSI+RAS +IIV+S YSA+G TPQYKWLE+E
Sbjct: 244 IREAIPFKPYTHRYHVPYTASGSTSPLWYSIKRASTYIIVLSSYSAYGTSTPQYKWLERE 303
Query: 241 FPKVNRSETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAYER 300
PKVNR+ETPWLIVLMH P YNSYVHHYMEGE MRV++EPWFVEYKVDVVFA HVHAYER
Sbjct: 304 LPKVNRTETPWLIVLMHSPFYNSYVHHYMEGESMRVMFEPWFVEYKVDVVFAGHVHAYER 363
Query: 301 SERMSNIAYNVTNALCSPVSDQSAPVYITIGDGGNQEGLAKEMTEPQPRYSAYREASFGH 360
SER+SNIAYN+ N LC+P+ D SAPVY+TIGDGGN EGL EMTEPQP YSAYREASFGH
Sbjct: 364 SERISNIAYNIVNGLCTPIKDPSAPVYLTIGDGGNLEGLVTEMTEPQPNYSAYREASFGH 423
Query: 361 GILDVKNRTHAYFGWHRNQDDYAVEADSVWLHNRYWKPS 399
GIL++KNRTHAYFGWHRNQD YAVEADS+WL+NRYW S
Sbjct: 424 GILEIKNRTHAYFGWHRNQDGYAVEADSLWLNNRYWSVS 462
|
Source: Gossypium hirsutum Species: Gossypium hirsutum Genus: Gossypium Family: Malvaceae Order: Malvales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225458131|ref|XP_002280873.1| PREDICTED: purple acid phosphatase 2 [Vitis vinifera] gi|147782289|emb|CAN60822.1| hypothetical protein VITISV_037054 [Vitis vinifera] gi|302142576|emb|CBI19779.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 684 bits (1765), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/396 (80%), Positives = 352/396 (88%)
Query: 1 VHITQGDHEGKGVIVSWVTPDEPGSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHH 60
VHITQGD+EG V+VSW TPDEPGS+TVLYWAENS K A GIVLTY YFNYTS IHH
Sbjct: 61 VHITQGDYEGNAVLVSWTTPDEPGSSTVLYWAENSKTKSHAKGIVLTYKYFNYTSGYIHH 120
Query: 61 CTIEDLEFDTKYYYEVGVGNATRQFSFTTPPGVGPDVPYTFGLIGDLGQTYYSNRTLTHY 120
CTI++L FDTKYYYEVG+GN+TRQF F TPP GPDVPYTFGLIGDLGQTY+SNRTLTHY
Sbjct: 121 CTIKNLTFDTKYYYEVGIGNSTRQFWFVTPPRAGPDVPYTFGLIGDLGQTYHSNRTLTHY 180
Query: 121 ELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHEIDFAPQ 180
EL+PIKGQTVL+VGDLSYADDYPFHDN RWDTWGRF ER+AAYQPWIWT GNHEIDFAP
Sbjct: 181 ELSPIKGQTVLYVGDLSYADDYPFHDNVRWDTWGRFTERSAAYQPWIWTAGNHEIDFAPD 240
Query: 181 LGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRRASAHIIVMSCYSAFGKYTPQYKWLEKE 240
LGE+ PFKP+ NR+H+P+ A ST+P WYSI+RASA+IIVMS YSA+ KYTPQYKWL E
Sbjct: 241 LGESKPFKPYTNRYHVPFLASASTSPLWYSIKRASAYIIVMSSYSAYDKYTPQYKWLANE 300
Query: 241 FPKVNRSETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAYER 300
KVNR+ETPWLIVL+HCP+YNSY+HHYMEGE MRV+YE WFVEYK+DVVFA HVHAYER
Sbjct: 301 LLKVNRTETPWLIVLIHCPIYNSYIHHYMEGETMRVMYEAWFVEYKIDVVFAGHVHAYER 360
Query: 301 SERMSNIAYNVTNALCSPVSDQSAPVYITIGDGGNQEGLAKEMTEPQPRYSAYREASFGH 360
SER+SNIAY++ N C+P+ ++SAPVYITIGDGGNQEGLA MTEPQP YSAYREASFGH
Sbjct: 361 SERISNIAYDIVNGNCTPIPNESAPVYITIGDGGNQEGLATGMTEPQPSYSAYREASFGH 420
Query: 361 GILDVKNRTHAYFGWHRNQDDYAVEADSVWLHNRYW 396
GILD+KNRTHAYFGW+RNQD YAVEADSVWL NRYW
Sbjct: 421 GILDIKNRTHAYFGWNRNQDAYAVEADSVWLQNRYW 456
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225458133|ref|XP_002280883.1| PREDICTED: purple acid phosphatase 2 [Vitis vinifera] gi|302142575|emb|CBI19778.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 684 bits (1764), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 318/401 (79%), Positives = 350/401 (87%)
Query: 1 VHITQGDHEGKGVIVSWVTPDEPGSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHH 60
VHITQGD+EG VI+SW+TPDEPGSNTVLYWAEN K A+GIVLTY YF YTS IHH
Sbjct: 61 VHITQGDYEGNAVIISWITPDEPGSNTVLYWAENGKHKSHANGIVLTYKYFKYTSGYIHH 120
Query: 61 CTIEDLEFDTKYYYEVGVGNATRQFSFTTPPGVGPDVPYTFGLIGDLGQTYYSNRTLTHY 120
CTI +L FDTKYYYEVG+GN TRQF F TPP GPDVPYTFGLIGDLGQTY SNRTLTHY
Sbjct: 121 CTIRNLVFDTKYYYEVGIGNTTRQFWFVTPPRAGPDVPYTFGLIGDLGQTYDSNRTLTHY 180
Query: 121 ELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHEIDFAPQ 180
EL+ IKGQ +L+VGDLSYADDYPFHDN RWDTWGRFIER+ AYQPWIWTVGNHEIDFAP
Sbjct: 181 ELSTIKGQALLYVGDLSYADDYPFHDNIRWDTWGRFIERSCAYQPWIWTVGNHEIDFAPD 240
Query: 181 LGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRRASAHIIVMSCYSAFGKYTPQYKWLEKE 240
+GE PFKP+ R+ +P+ A ST+P WYSI+RASA+IIVMS YSAFGK TPQYKWL E
Sbjct: 241 IGETKPFKPYEYRYQVPFEASKSTSPLWYSIKRASAYIIVMSSYSAFGKSTPQYKWLSYE 300
Query: 241 FPKVNRSETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAYER 300
PKVNR+ETPWLIVLMHCP+YNSY+HHYMEGE MRV+YEPWFVEYKVDVVFA HVHAYER
Sbjct: 301 LPKVNRTETPWLIVLMHCPMYNSYIHHYMEGESMRVIYEPWFVEYKVDVVFAGHVHAYER 360
Query: 301 SERMSNIAYNVTNALCSPVSDQSAPVYITIGDGGNQEGLAKEMTEPQPRYSAYREASFGH 360
SER+SNIAYN+ N C+P+ D+SAPVYITIGDGGNQ+GLA MTEPQP YSAYREASFGH
Sbjct: 361 SERVSNIAYNIVNGKCTPIHDESAPVYITIGDGGNQKGLATGMTEPQPSYSAYREASFGH 420
Query: 361 GILDVKNRTHAYFGWHRNQDDYAVEADSVWLHNRYWKPSGE 401
GILD++NRTHAYFGW+RNQD YAVEADSVWLHNRYW + E
Sbjct: 421 GILDIRNRTHAYFGWNRNQDAYAVEADSVWLHNRYWTSTQE 461
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|358248816|ref|NP_001239689.1| uncharacterized protein LOC100794124 [Glycine max] gi|304421392|gb|ADM32495.1| phytase [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 682 bits (1760), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/407 (79%), Positives = 351/407 (86%)
Query: 1 VHITQGDHEGKGVIVSWVTPDEPGSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHH 60
VHITQGDH GKGVI+SW++P EPGS+TV+YWAENS K QAHG LTY YFNYTS IHH
Sbjct: 37 VHITQGDHVGKGVIISWISPHEPGSSTVIYWAENSEFKWQAHGFFLTYKYFNYTSGYIHH 96
Query: 61 CTIEDLEFDTKYYYEVGVGNATRQFSFTTPPGVGPDVPYTFGLIGDLGQTYYSNRTLTHY 120
CT+ +LEFDTKYYYEVG+GN TRQF F TPP VGPDVPYTFGLIGDLGQTY SNRTLTHY
Sbjct: 97 CTVHNLEFDTKYYYEVGIGNTTRQFWFKTPPPVGPDVPYTFGLIGDLGQTYNSNRTLTHY 156
Query: 121 ELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHEIDFAPQ 180
E +P KGQT+L+VGDLSYADDYP HDN RWDTWGRF ER AAYQPWIWT GNHEIDFAPQ
Sbjct: 157 EQSPAKGQTILYVGDLSYADDYPLHDNIRWDTWGRFTERIAAYQPWIWTAGNHEIDFAPQ 216
Query: 181 LGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRRASAHIIVMSCYSAFGKYTPQYKWLEKE 240
LGE PFKP+ R+H+PY+A ST+P WYSI+RASA+IIVMS YSA GKYTPQYKWLEKE
Sbjct: 217 LGETRPFKPYTARYHVPYKASDSTSPLWYSIKRASAYIIVMSSYSALGKYTPQYKWLEKE 276
Query: 241 FPKVNRSETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAYER 300
PKVNR+ETPWLIVLMH P+YNSYV HYMEGE +RV+YE WFVEYKVDVVFA HVHAYER
Sbjct: 277 LPKVNRTETPWLIVLMHSPIYNSYVTHYMEGETVRVMYEKWFVEYKVDVVFAGHVHAYER 336
Query: 301 SERMSNIAYNVTNALCSPVSDQSAPVYITIGDGGNQEGLAKEMTEPQPRYSAYREASFGH 360
SER+SNIAYNV N LC P++DQSAPVYITIGDGGN EGLA MTEPQP YSAYREASFGH
Sbjct: 337 SERVSNIAYNVVNGLCRPINDQSAPVYITIGDGGNLEGLATAMTEPQPSYSAYREASFGH 396
Query: 361 GILDVKNRTHAYFGWHRNQDDYAVEADSVWLHNRYWKPSGELPRAAI 407
GILD+KNRTHA+F W+RNQD YAV ADSVWLHNRYW + AA
Sbjct: 397 GILDIKNRTHAHFSWNRNQDGYAVVADSVWLHNRYWNHPEQTSLAAF 443
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|4210712|emb|CAA07280.1| purple acid phosphatase [Ipomoea batatas] | Back alignment and taxonomy information |
|---|
Score = 678 bits (1750), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 310/407 (76%), Positives = 356/407 (87%)
Query: 1 VHITQGDHEGKGVIVSWVTPDEPGSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHH 60
VHITQGD+EGKGVI+SWVTP+EPGS TV+YWAENS++K++A G+V+TY Y+NYTS IHH
Sbjct: 21 VHITQGDYEGKGVIISWVTPEEPGSKTVVYWAENSSVKRRADGVVVTYKYYNYTSGYIHH 80
Query: 61 CTIEDLEFDTKYYYEVGVGNATRQFSFTTPPGVGPDVPYTFGLIGDLGQTYYSNRTLTHY 120
CTI+DLE+DTKYYYE+G+G+A RQF F TPP GPDVPYTFGLIGDLGQTY SN TLTHY
Sbjct: 81 CTIKDLEYDTKYYYELGLGDAKRQFWFVTPPKPGPDVPYTFGLIGDLGQTYDSNTTLTHY 140
Query: 121 ELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHEIDFAPQ 180
ELNP+KGQ++LFVGDLSYAD YP HDNNRWDTWGRF+ER+ AYQPWIWT GNHEIDF P
Sbjct: 141 ELNPVKGQSLLFVGDLSYADRYPNHDNNRWDTWGRFVERSTAYQPWIWTAGNHEIDFVPD 200
Query: 181 LGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRRASAHIIVMSCYSAFGKYTPQYKWLEKE 240
+GE +PFKPF +RF +P+ + ST+P WYSI+RASAHIIVMS YSA+G YTPQ+KWL+ E
Sbjct: 201 IGETVPFKPFTHRFFMPFESSGSTSPLWYSIKRASAHIIVMSSYSAYGTYTPQWKWLQGE 260
Query: 241 FPKVNRSETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAYER 300
PKVNRSETPWLIVLMHCP+Y+SYVHHYMEGE MRVLYEPWFVEYKVDVVFA HVH+YER
Sbjct: 261 LPKVNRSETPWLIVLMHCPMYSSYVHHYMEGETMRVLYEPWFVEYKVDVVFAGHVHSYER 320
Query: 301 SERMSNIAYNVTNALCSPVSDQSAPVYITIGDGGNQEGLAKEMTEPQPRYSAYREASFGH 360
+ER+SN+AYN+ N LCSP +D SAPVYITIGDGGN EGLA EMT+PQP YSAYREASFGH
Sbjct: 321 TERVSNVAYNIVNGLCSPKNDSSAPVYITIGDGGNSEGLATEMTQPQPSYSAYREASFGH 380
Query: 361 GILDVKNRTHAYFGWHRNQDDYAVEADSVWLHNRYWKPSGELPRAAI 407
GI D+KNRTHA+FGWHRNQD AVE DS+W NRYW E +A+
Sbjct: 381 GIFDIKNRTHAHFGWHRNQDGLAVEGDSLWFINRYWMSKEEASVSAV 427
|
Source: Ipomoea batatas Species: Ipomoea batatas Genus: Ipomoea Family: Convolvulaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|317106670|dbj|BAJ53173.1| JHL18I08.7 [Jatropha curcas] | Back alignment and taxonomy information |
|---|
Score = 674 bits (1738), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/407 (77%), Positives = 348/407 (85%)
Query: 1 VHITQGDHEGKGVIVSWVTPDEPGSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHH 60
VHITQGD+E VIVSWVTPDEPGS++V YWAENS +K G+V+ Y YFNYTS IHH
Sbjct: 65 VHITQGDYEANSVIVSWVTPDEPGSSSVQYWAENSEIKNSVEGLVVRYKYFNYTSGYIHH 124
Query: 61 CTIEDLEFDTKYYYEVGVGNATRQFSFTTPPGVGPDVPYTFGLIGDLGQTYYSNRTLTHY 120
CTI+DLEFDTKY Y+VG GNA RQF F TPP GPDVPYTFGLIGDLGQT+ SNRTL HY
Sbjct: 125 CTIKDLEFDTKYQYQVGTGNAIRQFWFVTPPKSGPDVPYTFGLIGDLGQTHDSNRTLAHY 184
Query: 121 ELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHEIDFAPQ 180
EL+PIKGQT+LFVGDLSYADDYPFH+N RWDTWGRFIERNAAYQPWIWT GNHE+D+APQ
Sbjct: 185 ELSPIKGQTLLFVGDLSYADDYPFHNNIRWDTWGRFIERNAAYQPWIWTAGNHELDWAPQ 244
Query: 181 LGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRRASAHIIVMSCYSAFGKYTPQYKWLEKE 240
GE PFKP+ NRFH+PYR ST+P WYSI+RASA+IIVMS YSAFGKYTPQY+WL E
Sbjct: 245 FGERKPFKPYLNRFHVPYRECGSTSPLWYSIKRASAYIIVMSSYSAFGKYTPQYRWLINE 304
Query: 241 FPKVNRSETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAYER 300
PKVNRSETPWLIVLMH P+YNSY HHYMEGE MRV+YE WFV+YKVDVVFA HVHAYER
Sbjct: 305 LPKVNRSETPWLIVLMHAPMYNSYAHHYMEGETMRVMYEEWFVKYKVDVVFAGHVHAYER 364
Query: 301 SERMSNIAYNVTNALCSPVSDQSAPVYITIGDGGNQEGLAKEMTEPQPRYSAYREASFGH 360
SER+SNI YN+ N LC+P SDQSAPVYITIGDGGN EGL EMTEPQP YSA+REASFGH
Sbjct: 365 SERISNIEYNIVNGLCTPKSDQSAPVYITIGDGGNLEGLVTEMTEPQPSYSAFREASFGH 424
Query: 361 GILDVKNRTHAYFGWHRNQDDYAVEADSVWLHNRYWKPSGELPRAAI 407
G+LD++NR+HA+F W+RNQD YAVEADSVWL NRYW P AA+
Sbjct: 425 GLLDIRNRSHAFFSWNRNQDGYAVEADSVWLINRYWSSFERSPTAAL 471
|
Source: Jatropha curcas Species: Jatropha curcas Genus: Jatropha Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225427698|ref|XP_002263937.1| PREDICTED: purple acid phosphatase 2 isoform 1 [Vitis vinifera] gi|297744760|emb|CBI38022.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 671 bits (1730), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 310/401 (77%), Positives = 354/401 (88%)
Query: 1 VHITQGDHEGKGVIVSWVTPDEPGSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHH 60
VHITQGDHEG+GVIVSWVT DEPGSNTVLYW+ENS K +A GI++TY ++NYTS IHH
Sbjct: 66 VHITQGDHEGRGVIVSWVTVDEPGSNTVLYWSENSKRKNRAEGIMVTYKFYNYTSGYIHH 125
Query: 61 CTIEDLEFDTKYYYEVGVGNATRQFSFTTPPGVGPDVPYTFGLIGDLGQTYYSNRTLTHY 120
CTI++LEF+TKYYY VG+G+ R+F F TPP VGPDVPYTFGLIGDLGQ+Y SN TLTHY
Sbjct: 126 CTIKNLEFNTKYYYVVGIGHTPRKFWFVTPPKVGPDVPYTFGLIGDLGQSYDSNMTLTHY 185
Query: 121 ELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHEIDFAPQ 180
ELNP KG+TVLFVGDLSYAD+YP HDN RWDTWGRF ER+ AYQPWIWT GNHEIDF P+
Sbjct: 186 ELNPAKGKTVLFVGDLSYADNYPNHDNVRWDTWGRFTERSTAYQPWIWTAGNHEIDFVPE 245
Query: 181 LGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRRASAHIIVMSCYSAFGKYTPQYKWLEKE 240
+GE IPFKP+++R+H+PYRA STAPFWYSI+RASA+IIV++ YSA+GKYTPQYKWLEKE
Sbjct: 246 IGEFIPFKPYSHRYHVPYRASDSTAPFWYSIKRASAYIIVLASYSAYGKYTPQYKWLEKE 305
Query: 241 FPKVNRSETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAYER 300
PKVNRSETPWLIVLMH P YNSY +HYMEGE MRV+YEPWFV+YKVDVVFA HVHAYER
Sbjct: 306 LPKVNRSETPWLIVLMHSPWYNSYNYHYMEGETMRVMYEPWFVQYKVDVVFAGHVHAYER 365
Query: 301 SERMSNIAYNVTNALCSPVSDQSAPVYITIGDGGNQEGLAKEMTEPQPRYSAYREASFGH 360
SER+SNIAYNV N +C+PV+DQSAPVYITIGDGGN EGLA MTEPQP+YSAYREASFGH
Sbjct: 366 SERVSNIAYNVINGICTPVNDQSAPVYITIGDGGNLEGLATNMTEPQPKYSAYREASFGH 425
Query: 361 GILDVKNRTHAYFGWHRNQDDYAVEADSVWLHNRYWKPSGE 401
I D+KNRTHA++ WHRNQD YAV+ADS+W NR+W P +
Sbjct: 426 AIFDIKNRTHAHYSWHRNQDGYAVKADSLWFFNRFWHPEDD 466
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356518396|ref|XP_003527865.1| PREDICTED: purple acid phosphatase 2-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 664 bits (1714), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 310/396 (78%), Positives = 346/396 (87%)
Query: 1 VHITQGDHEGKGVIVSWVTPDEPGSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHH 60
VHITQGDH GKGVI+SW+TP EPGS+TV YWAENS + +AHG L Y YFNYTS IHH
Sbjct: 37 VHITQGDHVGKGVIISWITPHEPGSSTVKYWAENSEFELKAHGFYLAYKYFNYTSGYIHH 96
Query: 61 CTIEDLEFDTKYYYEVGVGNATRQFSFTTPPGVGPDVPYTFGLIGDLGQTYYSNRTLTHY 120
CTI +LEFDTKYYYEVG+GN TRQF F TPP VGP+VPYTFGLIGDLGQTY SN TLTHY
Sbjct: 97 CTIHNLEFDTKYYYEVGIGNTTRQFWFKTPPPVGPNVPYTFGLIGDLGQTYNSNTTLTHY 156
Query: 121 ELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHEIDFAPQ 180
E NP+KGQT+L+VGDLSYADD+P+HDN +WDTWGRF ER AAYQPWIWT GNHEIDFAP+
Sbjct: 157 EKNPVKGQTILYVGDLSYADDFPYHDNTKWDTWGRFTERIAAYQPWIWTAGNHEIDFAPE 216
Query: 181 LGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRRASAHIIVMSCYSAFGKYTPQYKWLEKE 240
LGE PFKP+ R+HLPY A ST+P WYSI+RAS +IIV+S YSAFGKYTPQYKWL KE
Sbjct: 217 LGETRPFKPYTCRYHLPYTASNSTSPLWYSIKRASTYIIVLSSYSAFGKYTPQYKWLVKE 276
Query: 241 FPKVNRSETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAYER 300
PKVNR+ETPWLIVLMH P+YNSYV+HYMEGE +RVLYE WFVEYKVDVVFA HVHAYER
Sbjct: 277 LPKVNRTETPWLIVLMHSPMYNSYVNHYMEGETVRVLYEKWFVEYKVDVVFAGHVHAYER 336
Query: 301 SERMSNIAYNVTNALCSPVSDQSAPVYITIGDGGNQEGLAKEMTEPQPRYSAYREASFGH 360
S+R+SNIAY++ N L +P++DQSAPVYITIGDGGN EGLA MTEPQP YSAYREASFGH
Sbjct: 337 SKRVSNIAYSIVNGLHNPINDQSAPVYITIGDGGNIEGLATAMTEPQPSYSAYREASFGH 396
Query: 361 GILDVKNRTHAYFGWHRNQDDYAVEADSVWLHNRYW 396
GILD+KNRTHAYF W+RNQD YAV ADS+WL+NRYW
Sbjct: 397 GILDIKNRTHAYFSWNRNQDGYAVVADSIWLYNRYW 432
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 407 | ||||||
| UNIPROTKB|Q09131 | 464 | PAP "Purple acid phosphatase" | 0.977 | 0.857 | 0.741 | 5.3e-175 | |
| TAIR|locus:2005533 | 469 | PAP12 "AT2G27190" [Arabidopsis | 0.975 | 0.846 | 0.727 | 1.4e-172 | |
| TAIR|locus:2042689 | 468 | PAP10 "AT2G16430" [Arabidopsis | 0.990 | 0.861 | 0.719 | 8e-172 | |
| TAIR|locus:2010753 | 466 | PAP6 "purple acid phosphatase | 0.985 | 0.860 | 0.632 | 3.1e-147 | |
| TAIR|locus:2115345 | 466 | PAP25 "purple acid phosphatase | 0.985 | 0.860 | 0.631 | 5.7e-146 | |
| TAIR|locus:2184657 | 475 | PAP26 "AT5G34850" [Arabidopsis | 0.968 | 0.829 | 0.584 | 8.8e-134 | |
| TAIR|locus:2053149 | 441 | PAP11 "purple acid phosphatase | 0.724 | 0.668 | 0.655 | 4.8e-131 | |
| TAIR|locus:2075341 | 388 | PAP19 "purple acid phosphatase | 0.407 | 0.427 | 0.660 | 5.8e-80 | |
| TAIR|locus:2085770 | 437 | PAP18 "purple acid phosphatase | 0.899 | 0.837 | 0.416 | 8.4e-74 | |
| TAIR|locus:2011501 | 396 | PAP5 "purple acid phosphatase | 0.656 | 0.674 | 0.491 | 7.7e-71 |
| UNIPROTKB|Q09131 PAP "Purple acid phosphatase" [Glycine max (taxid:3847)] | Back alignment and assigned GO terms |
|---|
Score = 1700 (603.5 bits), Expect = 5.3e-175, P = 5.3e-175
Identities = 295/398 (74%), Positives = 342/398 (85%)
Query: 1 VHITQGDHEGKGVIVSWVTPDEPGSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHH 60
VHITQGD GK VIVSWVT DEPGS+ V YW+ENS K+ A G ++TY +FNY+S IHH
Sbjct: 57 VHITQGDLVGKAVIVSWVTVDEPGSSEVHYWSENSDKKKIAEGKLVTYRFFNYSSGFIHH 116
Query: 61 CTIEDLEFDTKYYYEVGVGNATRQFSFTTPPGVGPDVPYTFGLIGDLGQTYYSNRTLTHY 120
TI +LE+ TKYYYEVG+GN TRQF F TPP +GPDVPYTFGLIGDLGQ++ SN+TL+HY
Sbjct: 117 TTIRNLEYKTKYYYEVGLGNTTRQFWFVTPPEIGPDVPYTFGLIGDLGQSFDSNKTLSHY 176
Query: 121 ELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHEIDFAPQ 180
ELNP KGQTVLFVGDLSYAD+YP HDN RWD+WGRF ER+ AYQPWIWT GNHE FAP+
Sbjct: 177 ELNPRKGQTVLFVGDLSYADNYPNHDNIRWDSWGRFTERSVAYQPWIWTAGNHENHFAPE 236
Query: 181 LGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRRASAHIIVMSCYSAFGKYTPQYKWLEKE 240
+GE +PFKP+ +R+H+PY+A ST+PFWYSI+RASAHIIV++ YSA+GKYTPQYKWLEKE
Sbjct: 237 IGETVPFKPYTHRYHVPYKASQSTSPFWYSIKRASAHIIVLASYSAYGKYTPQYKWLEKE 296
Query: 241 FPKVNRSETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAYER 300
PKVNR+ETPWLIVLMH P YNSY +HYMEGE MRV+YEPWFV+YKVDVVFA HVHAYER
Sbjct: 297 LPKVNRTETPWLIVLMHSPWYNSYNYHYMEGETMRVMYEPWFVQYKVDVVFAGHVHAYER 356
Query: 301 SERMSNIAYNVTNALCSPVSDQSAPVYITIGDGGNQEGLAKEMTEPQPRYSAYREASFGH 360
SER+SN+AYN+ N LC+PV+D+SAPVYITIGDGG EGLA MTEPQP+YSA+REASFGH
Sbjct: 357 SERVSNVAYNIVNGLCAPVNDKSAPVYITIGDGGTLEGLATNMTEPQPKYSAFREASFGH 416
Query: 361 GILDVKNRTHAYFGWHRNQDDYAVEADSVWLHNRYWKP 398
I D+ NRTHA++ WHRNQD AVEADS+W NRYW P
Sbjct: 417 AIFDITNRTHAHYSWHRNQDGVAVEADSLWSFNRYWHP 454
|
|
| TAIR|locus:2005533 PAP12 "AT2G27190" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1677 (595.4 bits), Expect = 1.4e-172, P = 1.4e-172
Identities = 289/397 (72%), Positives = 334/397 (84%)
Query: 1 VHITQGDHEGKGVIVSWVTPDEPGSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHH 60
VH+TQG+HEG GVI+SWVTP +PGS TV YW EN ++QA V TY +FNYTS IHH
Sbjct: 63 VHVTQGNHEGNGVIISWVTPVKPGSKTVQYWCENEKSRKQAEATVNTYRFFNYTSGYIHH 122
Query: 61 CTIEDLEFDTKYYYEVGVGNATRQFSFTTPPGVGPDVPYTFGLIGDLGQTYYSNRTLTHY 120
C I+DLEFDTKYYYE+G G +R+F F PP GPDVPYTFGLIGDLGQTY SN TL+HY
Sbjct: 123 CLIDDLEFDTKYYYEIGSGKWSRRFWFFIPPKSGPDVPYTFGLIGDLGQTYDSNSTLSHY 182
Query: 121 ELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHEIDFAPQ 180
E+NP KGQ VLFVGDLSYAD YP HDNNRWDTWGRF+ER+ AYQPWIWT GNHEIDF P
Sbjct: 183 EMNPGKGQAVLFVGDLSYADRYPNHDNNRWDTWGRFVERSVAYQPWIWTAGNHEIDFVPD 242
Query: 181 LGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRRASAHIIVMSCYSAFGKYTPQYKWLEKE 240
+GE PFKPF NR+H P++A S +P WYSI+RASA+IIVMSCYS++G YTPQYKWLEKE
Sbjct: 243 IGEIEPFKPFMNRYHTPHKASGSISPLWYSIKRASAYIIVMSCYSSYGIYTPQYKWLEKE 302
Query: 241 FPKVNRSETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAYER 300
VNR+ETPWLIVL+H P Y+SYVHHYMEGE +RV+YE WFV+YKVDVVFA HVHAYER
Sbjct: 303 LQGVNRTETPWLIVLVHSPFYSSYVHHYMEGETLRVMYEQWFVKYKVDVVFAGHVHAYER 362
Query: 301 SERMSNIAYNVTNALCSPVSDQSAPVYITIGDGGNQEGLAKEMTEPQPRYSAYREASFGH 360
SER+SNIAYN+ N LC P+SD+SAP+YITIGDGGN EGL +M +PQP+YSA+REASFGH
Sbjct: 363 SERVSNIAYNIVNGLCEPISDESAPIYITIGDGGNSEGLLTDMMQPQPKYSAFREASFGH 422
Query: 361 GILDVKNRTHAYFGWHRNQDDYAVEADSVWLHNRYWK 397
G+L++KNRTHAYF W+RNQD AV ADSVWL NR+W+
Sbjct: 423 GLLEIKNRTHAYFSWNRNQDGNAVAADSVWLLNRFWR 459
|
|
| TAIR|locus:2042689 PAP10 "AT2G16430" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1670 (592.9 bits), Expect = 8.0e-172, P = 8.0e-172
Identities = 290/403 (71%), Positives = 334/403 (82%)
Query: 1 VHITQGDHEGKGVIVSWVTPDEPGSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHH 60
VHITQGD EGK VIVSWVT + GSN V+YW ENST K +AHG TY ++NYTS IHH
Sbjct: 62 VHITQGDVEGKAVIVSWVTQEAKGSNKVIYWKENSTKKHKAHGKTNTYKFYNYTSGFIHH 121
Query: 61 CTIEDLEFDTKYYYEVGVGNATRQFSFTTPPGVGPDVPYTFGLIGDLGQTYYSNRTLTHY 120
C I +LE+DTKYYY +GVG R+F F TPP +GPDVPYTFGLIGDLGQ+Y SN TLTHY
Sbjct: 122 CPIRNLEYDTKYYYVLGVGQTERKFWFFTPPEIGPDVPYTFGLIGDLGQSYDSNITLTHY 181
Query: 121 ELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHEIDFAPQ 180
E NP KGQ VLFVGD+SYAD YP HDN RWD+WGRF ER+ AYQPWIWT GNHE+DFAP+
Sbjct: 182 ENNPTKGQAVLFVGDISYADTYPDHDNRRWDSWGRFAERSTAYQPWIWTTGNHELDFAPE 241
Query: 181 LGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRRASAHIIVMSCYSAFGKYTPQYKWLEKE 240
+GE PFKPF +R+ PYR+ ST PFWYSI+R A+IIV++ YSA+GKYTPQY+WLE+E
Sbjct: 242 IGENRPFKPFTHRYRTPYRSSGSTEPFWYSIKRGPAYIIVLASYSAYGKYTPQYQWLEEE 301
Query: 241 FPKVNRSETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAYER 300
FPKVNR+ETPWLIVLMH P YNSY +HYMEGE MRV+YE WFV+YKVDVVFA HVHAYER
Sbjct: 302 FPKVNRTETPWLIVLMHSPWYNSYDYHYMEGETMRVMYEAWFVKYKVDVVFAGHVHAYER 361
Query: 301 SERMSNIAYNVTNALCSPVSDQSAPVYITIGDGGNQEGLAKEMTEPQPRYSAYREASFGH 360
SER+SNIAYNV N +C+PV DQSAPVYITIGDGGN EGLA +MTEPQP+YSA+REASFGH
Sbjct: 362 SERVSNIAYNVVNGICTPVKDQSAPVYITIGDGGNIEGLATKMTEPQPKYSAFREASFGH 421
Query: 361 GILDVKNRTHAYFGWHRNQDDYAVEADSVWLHNRYWKPSGELP 403
I +KNRTHA++GWHRN D YAVE D +W +NR+W P + P
Sbjct: 422 AIFSIKNRTHAHYGWHRNHDGYAVEGDRMWFYNRFWHPVDDSP 464
|
|
| TAIR|locus:2010753 PAP6 "purple acid phosphatase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1438 (511.3 bits), Expect = 3.1e-147, P = 3.1e-147
Identities = 258/408 (63%), Positives = 314/408 (76%)
Query: 1 VHITQGDHEGKGVIVSWVTP-DEPGSNTVLYW-AENST----LKQQAHGIVLTYNYFNYT 54
VH+TQGDH+G+G+IVSWVTP + GSN V YW A N + K++AH +Y +++Y+
Sbjct: 53 VHLTQGDHDGRGMIVSWVTPLNLAGSNVVTYWIATNGSDVKPAKKRAHASTKSYRFYDYS 112
Query: 55 SNCIHHCTIEDLEFDTKYYYEVGVGNATRQFSFTTPPGVGPDVPYTFGLIGDLGQTYYSN 114
S +HH TI+ LE+DTKY YEVG + RQFSFTTPP +GPDVPYTFG+IGDLGQTY SN
Sbjct: 113 SGFLHHATIKGLEYDTKYIYEVGTDKSVRQFSFTTPPKIGPDVPYTFGIIGDLGQTYASN 172
Query: 115 RTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHE 174
TL HY NP KGQ VLF GDLSYADD+P HD +WDTWGRF+E AAYQP+I+ GNHE
Sbjct: 173 ETLYHYMSNP-KGQAVLFAGDLSYADDHPNHDQRKWDTWGRFMEPCAAYQPFIFAAGNHE 231
Query: 175 IDFAPQLGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRRASAHIIVMSCYSAFGKYTPQY 234
IDF P +GE FKP+ +R+ Y+A ST+P WYS+RRASAHIIV+S YSA+GKYTPQY
Sbjct: 232 IDFVPNIGEPHAFKPYTHRYPNAYKASQSTSPLWYSVRRASAHIIVLSSYSAYGKYTPQY 291
Query: 235 KWLEKEFPKVNRSETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAH 294
WLE+E VNR ETPWLIV++H P YNS +HYMEGE MRV++E W V KVD+V + H
Sbjct: 292 IWLEQELKNVNREETPWLIVIVHSPWYNSNNYHYMEGESMRVMFESWLVNSKVDLVLSGH 351
Query: 295 VHAYERSERMSNIAYNVTNALCSPVSDQSAPVYITIGDGGNQEGLAKEMTEPQPRYSAYR 354
VHAYERSER+SNI YN+TN L SPV D +AP+YITIGDGGN EG+A +PQP YSAYR
Sbjct: 352 VHAYERSERISNIKYNITNGLSSPVKDPNAPIYITIGDGGNIEGIANSFVDPQPSYSAYR 411
Query: 355 EASFGHGILDVKNRTHAYFGWHRNQDDYAVEADSVWLHNRYWKPSGEL 402
EASFGH +L++ NRTHA + WHRNQD+ V ADS+ LHNR++ P E+
Sbjct: 412 EASFGHAVLEIMNRTHAQYTWHRNQDNEPVAADSIMLHNRHFFPVEEI 459
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| TAIR|locus:2115345 PAP25 "purple acid phosphatase 25" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1426 (507.0 bits), Expect = 5.7e-146, P = 5.7e-146
Identities = 257/407 (63%), Positives = 311/407 (76%)
Query: 1 VHITQGDHEGKGVIVSWVTP-DEPGSNTVLYW-AENSTLK---QQAHGIVLTYNYFNYTS 55
VHI QGD+ G+G+I+SWVTP + GSN V YW A + +K ++ H +Y +++YTS
Sbjct: 54 VHIVQGDYNGRGIIISWVTPLNLAGSNVVTYWKAVDGDVKPKKKRGHASTSSYRFYDYTS 113
Query: 56 NCIHHCTIEDLEFDTKYYYEVGVGNATRQFSFTTPPGVGPDVPYTFGLIGDLGQTYYSNR 115
+HH TI+ LE+DTKY YEVG + RQFSFT+PP VGPDVPYTFG+IGDLGQT SN
Sbjct: 114 GFLHHATIKGLEYDTKYIYEVGTDGSVRQFSFTSPPKVGPDVPYTFGIIGDLGQTLASNE 173
Query: 116 TLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHEI 175
TL HY NP KGQ VLF GDLSYADD+P HD +WD+WGRF+E AAYQ +I+ GNHEI
Sbjct: 174 TLYHYMSNP-KGQAVLFPGDLSYADDHPNHDQRKWDSWGRFVEPCAAYQTFIYAAGNHEI 232
Query: 176 DFAPQLGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRRASAHIIVMSCYSAFGKYTPQYK 235
DF P +GE FKP+ +R+H Y+A S +P WYSIRRASAHIIV+S YSA+GKYTPQY
Sbjct: 233 DFVPNIGEPHAFKPYIHRYHNAYKASKSISPLWYSIRRASAHIIVLSSYSAYGKYTPQYV 292
Query: 236 WLEKEFPKVNRSETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHV 295
WLE+E KVNR ETPWLIV++H P YNS +HYMEGE MR ++E WFV KVD+V + HV
Sbjct: 293 WLEQELKKVNREETPWLIVMVHSPWYNSNNYHYMEGESMRAMFESWFVNSKVDLVLSGHV 352
Query: 296 HAYERSERMSNIAYNVTNALCSPVSDQSAPVYITIGDGGNQEGLAKEMTEPQPRYSAYRE 355
H+YERSER+SNI YN+TN L PV D SAP+YITIGDGGN EG+A T+PQP YSAYRE
Sbjct: 353 HSYERSERVSNIKYNITNGLSYPVKDPSAPIYITIGDGGNIEGIANSFTDPQPSYSAYRE 412
Query: 356 ASFGHGILDVKNRTHAYFGWHRNQDDYAVEADSVWLHNRYWKPSGEL 402
ASFGH +L++ NRTHAY+ WHRNQD+ V ADS+ LHNRY+ P EL
Sbjct: 413 ASFGHAVLEIYNRTHAYYTWHRNQDNEPVAADSIMLHNRYFFPVEEL 459
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| TAIR|locus:2184657 PAP26 "AT5G34850" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1311 (466.6 bits), Expect = 8.8e-134, P = 8.8e-134
Identities = 232/397 (58%), Positives = 291/397 (73%)
Query: 1 VHITQGDHEGKGVIVSWVTPDEPGSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHH 60
VHITQGD++GK VI+SWVTPDEPGS+ V Y A + A G Y ++ Y S IHH
Sbjct: 57 VHITQGDYDGKAVIISWVTPDEPGSSQVHYGAVQGKYEFVAQGTYHNYTFYKYKSGFIHH 116
Query: 61 CTIEDLEFDTKYYYEVGVGNATRQFSFTTPPGVGPDVPYTFGLIGDLGQTYYSNRTLTHY 120
C + DLE DTKYYY++ G ++R+F F TPP V PD Y FG+IGD+GQT+ S TL HY
Sbjct: 117 CLVSDLEHDTKYYYKIESGESSREFWFVTPPHVHPDASYKFGIIGDMGQTFNSLSTLEHY 176
Query: 121 ELNPIKGQTVLFVGDLSYADDYPFHDNN-RWDTWGRFIERNAAYQPWIWTVGNHEIDFAP 179
+ Q VLF+GDLSYAD Y ++D RWD+WGRF+ER+ AYQPW+W+ GNHE+D+ P
Sbjct: 177 MESG--AQAVLFLGDLSYADRYQYNDVGVRWDSWGRFVERSTAYQPWLWSAGNHEVDYMP 234
Query: 180 QLGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRRASAHIIVMSCYSAFGKYTPQYKWLEK 239
+GE PF+ + R+ PY A S++P WY++RRASAHIIV+S YS F KYTPQ+ WL +
Sbjct: 235 YMGEVTPFRNYLQRYTTPYLASKSSSPLWYAVRRASAHIIVLSSYSPFVKYTPQWHWLSE 294
Query: 240 EFPKVNRSETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAYE 299
E +V+R +TPWLIVLMH P+YNS H+MEGE MR +E WFV++KVDV+FA HVHAYE
Sbjct: 295 ELTRVDREKTPWLIVLMHVPIYNSNEAHFMEGESMRAAFEEWFVQHKVDVIFAGHVHAYE 354
Query: 300 RSERMSNIAYNVTNALCSPVSDQSAPVYITIGDGGNQEGLAKEMTEPQPRYSAYREASFG 359
RS R+SN+ YNV++ PV D+SAPVYIT+GDGGNQEGLA TEPQP YSA+REAS+G
Sbjct: 355 RSYRISNVRYNVSSGDRYPVPDKSAPVYITVGDGGNQEGLAGRFTEPQPDYSAFREASYG 414
Query: 360 HGILDVKNRTHAYFGWHRNQDDYAVEADSVWLHNRYW 396
H LD+KNRTHA + W+RN D V D LHN+YW
Sbjct: 415 HSTLDIKNRTHAIYHWNRNDDGKKVATDEFVLHNQYW 451
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| TAIR|locus:2053149 PAP11 "purple acid phosphatase 11" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1114 (397.2 bits), Expect = 4.8e-131, Sum P(2) = 4.8e-131
Identities = 194/296 (65%), Positives = 239/296 (80%)
Query: 106 DLGQTYYSNRTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQP 165
DLGQTY SN+TL +Y NP KGQ VLFVGDLSYADD+P HD +WD++GRF+E +AAYQP
Sbjct: 145 DLGQTYASNQTLYNYMSNP-KGQAVLFVGDLSYADDHPNHDQRKWDSYGRFVEPSAAYQP 203
Query: 166 WIWTVGNHEIDFAPQLGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRRASAHIIVMSCYS 225
W W GN+EID+A + E PFKP+ NR+H+PY+A ST+P WYSI+RAS +IIV+S YS
Sbjct: 204 WSWAAGNYEIDYAQSISETQPFKPYKNRYHVPYKASQSTSPLWYSIKRASTYIIVLSSYS 263
Query: 226 AFGKYTPQYKWLEKEFPKVNRSETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEY 285
A+ KYTPQ WL+ E KVNRSET WLIVL+H P YNS +HYMEGE MRV +EPWFVE
Sbjct: 264 AYDKYTPQNSWLQDELKKVNRSETSWLIVLVHAPWYNSNNYHYMEGESMRVTFEPWFVEN 323
Query: 286 KVDVVFAAHVHAYERSERMSNIAYNVTNALCSPVSDQSAPVYITIGDGGNQEGLAKEMTE 345
KVD+VFA HVHAYERS+R+SNI YN+T+ + +PV DQ+AP+YITIGDGGN EG+A T+
Sbjct: 324 KVDIVFAGHVHAYERSKRISNIHYNITDGMSTPVKDQNAPIYITIGDGGNIEGIANSFTD 383
Query: 346 PQPRYSAYREASFGHGILDVKNRTHAYFGWHRNQDDYAVEADSVWLHNRYWKPSGE 401
PQP YSA+REASFGH +L++KNRTHA++ WHRN++D AV ADS+WL RY+ P E
Sbjct: 384 PQPSYSAFREASFGHALLEIKNRTHAHYTWHRNKEDEAVIADSIWLKKRYYLPEEE 439
|
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| TAIR|locus:2075341 PAP19 "purple acid phosphatase 19" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 621 (223.7 bits), Expect = 5.8e-80, Sum P(2) = 5.8e-80
Identities = 113/171 (66%), Positives = 138/171 (80%)
Query: 230 YTPQYKWLEKEFPKVNRSETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDV 289
Y+P + ++ E KVNRSETPWLIVL+H P YNS +HYMEGE MRV +EPWFVE KVD+
Sbjct: 212 YSPLTQLMD-ELKKVNRSETPWLIVLVHAPWYNSNNYHYMEGESMRVTFEPWFVENKVDI 270
Query: 290 VFAAHVHAYERSERMSNIAYNVTNALCSPVSDQSAPVYITIGDGGNQEGLAKEMTEPQPR 349
VFA HVHAYERSER+SNI YN+T+ + +PV DQ+APVYITIGDGGN EG+A +PQP
Sbjct: 271 VFAGHVHAYERSERISNIQYNITDGMSTPVKDQNAPVYITIGDGGNIEGIANNFIDPQPS 330
Query: 350 YSAYREASFGHGILDVKNRTHAYFGWHRNQDDY----AVEADSVWLHNRYW 396
YSA+REASFGH IL++KNRTHA++ WHRN++D AV ADS+WL NRY+
Sbjct: 331 YSAFREASFGHAILEIKNRTHAHYTWHRNKEDEFIPEAVIADSIWLKNRYY 381
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| TAIR|locus:2085770 PAP18 "purple acid phosphatase 18" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 745 (267.3 bits), Expect = 8.4e-74, P = 8.4e-74
Identities = 164/394 (41%), Positives = 219/394 (55%)
Query: 1 VHIT-QGDHEGKGVIVSWVTPDEPGSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIH 59
VHI+ GD K + V+WVT D+ + V Y G +Y+Y Y S IH
Sbjct: 50 VHISLAGD---KHMRVTWVTNDKSSPSFVEYGTSPGKYSYLGQGESTSYSYIMYRSGKIH 106
Query: 60 HCTIEDLEFDTKYYYEVGVGNATRQFSFTTPPGVGPDVPYTFGLIGDLGQTYYSNRTLTH 119
H I LE DT YYY G G +F TPP P TF + GDLGQT ++ TL H
Sbjct: 107 HTVIGPLEADTVYYYRCG-GEGP-EFHLKTPPA---QFPITFAVAGDLGQTGWTKSTLDH 161
Query: 120 YELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHEIDFAP 179
++ K L GDLSYAD Y H +WDT+G ++ A+ +PW+ T GNHE + P
Sbjct: 162 --IDQCKYAVHLLPGDLSYAD-YMQH---KWDTFGELVQPLASVRPWMVTQGNHEKESIP 215
Query: 180 QLGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRRASAHIIVMSCYSAFGKYTPQYKWLEK 239
+ + F F +R+ +PY S + +YS A H I++ Y+ + +Y+ QY WL+
Sbjct: 216 FIVDE--FVSFNSRWKMPYEESGSNSNLYYSFEVAGVHAIMLGSYTDYDRYSDQYSWLKA 273
Query: 240 EFPKVNRSETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAYE 299
+ KV+R TPWLIVL H P YNS H EG+ M EP VD+VF HVHAYE
Sbjct: 274 DLSKVDRERTPWLIVLFHVPWYNSNNAHQHEGDEMMAEMEPLLYASGVDIVFTGHVHAYE 333
Query: 300 RSERMSNIAYNVTNALCSPVSDQSAPVYITIGDGGNQEGLAKEMTEPQPRYSAYREASFG 359
R++R++N SD PV+ITIGDGGN+EGLA++ +P P +S +REASFG
Sbjct: 334 RTKRVNN-----------GKSDPCGPVHITIGDGGNREGLARKYKDPSPEWSVFREASFG 382
Query: 360 HGILDVKNRTHAYFGWHRNQDDYAVEADSVWLHN 393
HG L + N THA + WHRN DD +D VWL++
Sbjct: 383 HGELQMVNSTHALWTWHRNDDDEPTRSDEVWLNS 416
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| TAIR|locus:2011501 PAP5 "purple acid phosphatase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 717 (257.5 bits), Expect = 7.7e-71, P = 7.7e-71
Identities = 139/283 (49%), Positives = 185/283 (65%)
Query: 1 VHITQGDHEGKGVIVSWVTP-DEPGSNTVLYWAENSTLKQQAHGIVLT--YNYFNYTSNC 57
VHITQGDH G+G+I+SWVT +E GSN V YW +S I T Y YF+YTS
Sbjct: 18 VHITQGDHNGRGMIISWVTSLNEDGSNVVTYWIASSDGSDNKSVIATTSSYRYFDYTSGY 77
Query: 58 IHHCTIEDLEFDTKYYYEVGVGNATRQFSFTTPPGVGPDVPYTFGLIGDLGQTYYSNRTL 117
+HH I++LE+ TKY+YE+G G +TRQF+ T PP VGPDVPYTFG+IGDLGQTY SN+TL
Sbjct: 78 LHHAIIKELEYKTKYFYELGTGRSTRQFNLT-PPKVGPDVPYTFGVIGDLGQTYASNQTL 136
Query: 118 THYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHEIDF 177
+Y NP KGQ VLF GDLSYADD+P HD ++WD++GRF+E +AAYQPWIW GNHEID+
Sbjct: 137 YNYMSNP-KGQAVLFAGDLSYADDHPNHDQSKWDSYGRFVEPSAAYQPWIWAAGNHEIDY 195
Query: 178 APQLGEAIPFKPFANRFHLPYRAP---YSTAPFWYS-----IRRASAHIIVMSCYSAFGK 229
A +GE PFKP+ NR+H+PYRA Y+ W + R+ +++ ++ +
Sbjct: 196 AQSIGETQPFKPYKNRYHVPYRASQNKYTPQNSWLQDEFKKVNRSETPWLIVLVHAPWYN 255
Query: 230 YTPQYKWLEKEFPKVNRSETPWLIVLMHCPLYNSYVHHYMEGE 272
+ Y ++E E +V PW + ++ +VH Y E
Sbjct: 256 -SNNYHYMEGESMRVTFE--PWFVENKVDIVFAGHVHAYERSE 295
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q93WP4 | PEPP_ALLCE | 3, ., 1, ., 3, ., 6, 0 | 0.6010 | 0.9680 | 0.8191 | N/A | no |
| Q38924 | PPA12_ARATH | 3, ., 1, ., 3, ., 2 | 0.7279 | 0.9754 | 0.8464 | yes | no |
| Q09131 | PPAF_SOYBN | 3, ., 1, ., 3, ., 2 | 0.7412 | 0.9778 | 0.8577 | no | no |
| Q9SDZ9 | PPAF2_IPOBA | 3, ., 1, ., 3, ., 2 | 0.7537 | 0.9778 | 0.8559 | N/A | no |
| Q9SIV9 | PPA10_ARATH | 3, ., 1, ., 3, ., 2 | 0.7196 | 0.9901 | 0.8611 | no | no |
| Q9SE00 | PPAF1_IPOBA | 3, ., 1, ., 3, ., 2 | 0.7052 | 0.9729 | 0.8372 | N/A | no |
| P80366 | PPAF_PHAVU | 3, ., 1, ., 3, ., 2 | 0.6934 | 0.9778 | 0.9212 | N/A | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| estExt_fgenesh4_pg.C_LG_V1468 | hypothetical protein (467 aa) | ||||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 407 | |||
| cd00839 | 294 | cd00839, MPP_PAPs, purple acid phosphatases of the | 1e-109 | |
| PLN02533 | 427 | PLN02533, PLN02533, probable purple acid phosphata | 1e-85 | |
| pfam00149 | 185 | pfam00149, Metallophos, Calcineurin-like phosphoes | 3e-24 | |
| pfam14008 | 62 | pfam14008, Metallophos_C, Iron/zinc purple acid ph | 1e-18 | |
| cd00838 | 131 | cd00838, MPP_superfamily, metallophosphatase super | 3e-07 | |
| COG1409 | 301 | COG1409, Icc, Predicted phosphohydrolases [General | 7e-04 | |
| cd07378 | 277 | cd07378, MPP_ACP5, Homo sapiens acid phosphatase 5 | 9e-04 | |
| TIGR04123 | 208 | TIGR04123, P_estr_lig_assc, metallophosphoesterase | 0.002 |
| >gnl|CDD|163615 cd00839, MPP_PAPs, purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 322 bits (827), Expect = e-109
Identities = 127/305 (41%), Positives = 164/305 (53%), Gaps = 17/305 (5%)
Query: 95 PDVPYTFGLIGDLGQ-TYYSNRTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTW 153
D P+ F + GD+GQ T S TL H E +L VGDL+YAD Y +RWDT+
Sbjct: 1 DDTPFKFAVFGDMGQNTNNSTNTLDHLEKELGNYDAILHVGDLAYADGYNN--GSRWDTF 58
Query: 154 GRFIERNAAYQPWIWTVGNHEIDFAPQLGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRR 213
R IE A+Y P++ T GNHE D+ + K F RF P+ ST+ WYS
Sbjct: 59 MRQIEPLASYVPYMVTPGNHEADYNFSFYK---IKAFFPRFRFPHSPSGSTSNLWYSFDV 115
Query: 214 ASAHIIVMSCYSAF---GKYTPQYKWLEKEFPKVNRSETPWLIVLMHCPLYNSYVHHYM- 269
H + +S F G +PQY WLE + KV+RS+TPW+IV+ H P+Y S H
Sbjct: 116 GPVHFVSLSTEVDFYGDGPGSPQYDWLEADLAKVDRSKTPWIIVMGHRPMYCSNTDHDDC 175
Query: 270 -EGEPMRVLYEPWFVEYKVDVVFAAHVHAYERSERMSNIAYNVTNALCSPVSDQSAPVYI 328
EGE MR E F +Y VD+V + HVHAYER+ + N C+P S+ PV+I
Sbjct: 176 IEGEKMRAALEDLFYKYGVDLVLSGHVHAYERTCPVYNGTVVGD---CNPYSNPKGPVHI 232
Query: 329 TIGDGGNQEGLAKEMTEPQPRYSAYREASFGHGILDVKNRTHAYFGWHRNQDDYAVEADS 388
IG GGN EGL P P +SA+RE+ +G G L V N TH +F W RN D V DS
Sbjct: 233 VIGAGGNDEGLDPFSAPP-PAWSAFRESDYGFGRLTVHNSTHLHFEWIRNDDG--VVIDS 289
Query: 389 VWLHN 393
W+
Sbjct: 290 FWIIK 294
|
Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 294 |
| >gnl|CDD|215292 PLN02533, PLN02533, probable purple acid phosphatase | Back alignment and domain information |
|---|
Score = 266 bits (682), Expect = 1e-85
Identities = 144/380 (37%), Positives = 211/380 (55%), Gaps = 25/380 (6%)
Query: 15 VSWVTPDEPGSNTVLYWAENSTLKQQAHGIVLTYNYF-NYTSNCIHHCTIEDLEFDTKYY 73
+SW+T D +V+Y + + A+G +Y+Y Y S I+ I L+ +T YY
Sbjct: 59 ISWITQDSI-PPSVVYGTVSGKYEGSANGTSSSYHYLLIYRSGQINDVVIGPLKPNTVYY 117
Query: 74 YEVGVGNATRQFSFTTPPGVGPDVPYTFGLIGDLGQTYYSNRTLTHYELNPIKGQTVLFV 133
Y+ G ++T++FSF TPP P F + GDLG + ++ TL H ++ +
Sbjct: 118 YKCGGPSSTQEFSFRTPPS---KFPIKFAVSGDLGTSEWTKSTLEH--VSKWDYDVFILP 172
Query: 134 GDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHEIDFAPQLGEAIPFKPFANR 193
GDLSYA+ Y WDT+GR ++ A+ +PW+ T GNHE++ P L F + R
Sbjct: 173 GDLSYANFY----QPLWDTFGRLVQPLASQRPWMVTHGNHELEKIPIL-HPEKFTAYNAR 227
Query: 194 FHLPYRAPYSTAPFWYSIRRASAHIIVMSCYSAFGKYTPQYKWLEKEFPKVNRSETPWLI 253
+ +P+ ST+ +YS HII++ Y+ F + QY+WLE K++R TPW++
Sbjct: 228 WRMPFEESGSTSNLYYSFNVYGVHIIMLGSYTDFEPGSEQYQWLENNLKKIDRKTTPWVV 287
Query: 254 VLMHCPLYNSYVHHYMEGEP--MRVLYEPWFVEYKVDVVFAAHVHAYERSERMSNIAYNV 311
++H P YNS H E E M+ E + +VD+VFA HVHAYER +R+
Sbjct: 288 AVVHAPWYNSNEAHQGEKESVGMKESMETLLYKARVDLVFAGHVHAYERFDRVYQGKT-- 345
Query: 312 TNALCSPVSDQSAPVYITIGDGGNQEGLAKEMTEPQPRYSAYREASFGHGILDVKNRTHA 371
D+ PVYITIGDGGN+EGLA + +P+P S +REASFGHG L+V +
Sbjct: 346 ---------DKCGPVYITIGDGGNREGLATKYIDPKPDISLFREASFGHGQLNVVDANTM 396
Query: 372 YFGWHRNQDDYAVEADSVWL 391
+ WHRN DD +V +DSVWL
Sbjct: 397 EWTWHRNDDDQSVASDSVWL 416
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Length = 427 |
| >gnl|CDD|215750 pfam00149, Metallophos, Calcineurin-like phosphoesterase | Back alignment and domain information |
|---|
Score = 98.7 bits (245), Expect = 3e-24
Identities = 37/201 (18%), Positives = 49/201 (24%), Gaps = 18/201 (8%)
Query: 100 TFGLIGDLGQTYYSNRTLT--HYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFI 157
+IGDL L L K VLF+GDL F
Sbjct: 1 RILVIGDLHGGLDDLDLLLLLLELLGEPKPDLVLFLGDLVDRGPPSLEVLALL-----FA 55
Query: 158 ERNAAYQPWIWTVGNHEIDFAPQLGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRRASAH 217
+ A P GNH+ D T
Sbjct: 56 LKLKAPGPVYLVRGNHDFDSGNSELGFYLECAGLPYVLGNGDVSNGTVEIIGL------- 108
Query: 218 IIVMSCYSAFGKYTPQYKWLEKEFPKVNRSETPWLIVLMHCPLYNSYVHHYMEGEPMRVL 277
S G ++LE + + I+L+H PL S
Sbjct: 109 ----SSLYGKGGGLVWEEFLELLDLLLLAALVDGKILLVHGPLSPSLDSGDDIYLFGEEA 164
Query: 278 YEPWFVEYKVDVVFAAHVHAY 298
E + VD+V H H
Sbjct: 165 LEDLLKDNGVDLVLRGHTHVP 185
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This family includes a diverse range of phosphoesterases, including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this superfamily centre around the metal chelating residues. Length = 185 |
| >gnl|CDD|206178 pfam14008, Metallophos_C, Iron/zinc purple acid phosphatase-like protein C | Back alignment and domain information |
|---|
Score = 78.7 bits (195), Expect = 1e-18
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Query: 323 SAPVYITIGDGGNQEGLAKEMTEPQPRYSAYREASFGHGILDVKNRTHAYFGWHRNQD 380
APV+I +G GN +PQP +SA+R++ +G+G L V NRTH Y+ + R+ D
Sbjct: 1 KAPVHIVVGAAGNGLD---PFPDPQPPWSAFRDSDYGYGRLTVHNRTHLYWEFVRSDD 55
|
This domain is found at the C-terminus of Purple acid phosphatase proteins. Length = 62 |
| >gnl|CDD|163614 cd00838, MPP_superfamily, metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 48.8 bits (116), Expect = 3e-07
Identities = 19/94 (20%), Positives = 29/94 (30%), Gaps = 7/94 (7%)
Query: 227 FGKYTPQYKWLEKEFPKVNRSETPWL-------IVLMHCPLYNSYVHHYMEGEPMRVLYE 279
G + L + P I+L H P Y+ + +P
Sbjct: 37 VGDGPDPEEVLAAALALLLLLGIPVYVVPGNHDILLTHGPPYDPLDELSPDEDPGSEALL 96
Query: 280 PWFVEYKVDVVFAAHVHAYERSERMSNIAYNVTN 313
+Y VD+V + H H YER E +
Sbjct: 97 ELLEKYGVDLVLSGHTHVYERREPDGGGTLYINP 130
|
Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 131 |
| >gnl|CDD|224327 COG1409, Icc, Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Score = 41.1 bits (96), Expect = 7e-04
Identities = 42/188 (22%), Positives = 57/188 (30%), Gaps = 25/188 (13%)
Query: 155 RFIERNAAYQPWIWTVGNHEIDFAPQLGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRRA 214
+ R P I GNH D GEA + F A A R
Sbjct: 57 ELLARLELPAPVIVVPGNH--DARVVNGEAFSDQFF------NRYAVLVGACSSGGWRVI 108
Query: 215 SAHIIVMSC-YSAFGKYTPQYKWLEKEFPKVNRSETPWLIVLMHCPLYNSYVHHYME--- 270
V G Q WLE+ ++VL H PL +
Sbjct: 109 GLDSSVPGVPLGRLGAE--QLDWLEEALAAAPERAKDTVVVLHHHPLPSPGTGVDRVALR 166
Query: 271 --GEPMRVLYEPWFVEYKVDVVFAAHVH------AYERSERMSNIAYNVTNALCSPVSDQ 322
GE + VL V +V + H+H R+S++ A CS V
Sbjct: 167 DAGELLDVLIAH---GNDVRLVLSGHIHLAAQTVYQLNGTRLSDLLVGAGPATCSQVFRG 223
Query: 323 SAPVYITI 330
SA + T+
Sbjct: 224 SATAFNTL 231
|
Length = 301 |
| >gnl|CDD|163621 cd07378, MPP_ACP5, Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Score = 40.4 bits (95), Expect = 9e-04
Identities = 23/64 (35%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
Query: 233 QYKWLEKEFPKVNRSETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFA 292
Q WLEK S W IV+ H P+Y+S H R+L P +YKVD +
Sbjct: 153 QLAWLEKTL---AASTADWKIVVGHHPIYSSGEHGPTSCLVDRLL--PLLKKYKVDAYLS 207
Query: 293 AHVH 296
H H
Sbjct: 208 GHDH 211
|
Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 277 |
| >gnl|CDD|234479 TIGR04123, P_estr_lig_assc, metallophosphoesterase, DNA ligase-associated | Back alignment and domain information |
|---|
Score = 39.1 bits (92), Expect = 0.002
Identities = 14/66 (21%), Positives = 26/66 (39%), Gaps = 14/66 (21%)
Query: 128 QTVLFVGDLSYADDYPFHDN-NR----WDTWGRFIERNAAYQPWIWTVGNHEIDFAPQLG 182
+ ++ +GDL FHD + + + +A W+ GNH+ AP
Sbjct: 66 RRLIVLGDL-------FHDRYGAERLTLEDFAAWRRLHAGLD-WVLIEGNHDR-LAPDPP 116
Query: 183 EAIPFK 188
E + +
Sbjct: 117 EDLGGE 122
|
Members of this protein family are an uncharacterized putative metallophosphoesterase associated with a DNA ligase, a helicase, and a putative exonuclease. It may play a role in DNA repair. Its system is present in about 12 % of prokaryotic reference genomes. Length = 208 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 407 | |||
| KOG1378 | 452 | consensus Purple acid phosphatase [Carbohydrate tr | 100.0 | |
| PLN02533 | 427 | probable purple acid phosphatase | 100.0 | |
| cd00839 | 294 | MPP_PAPs purple acid phosphatases of the metalloph | 100.0 | |
| PTZ00422 | 394 | glideosome-associated protein 50; Provisional | 100.0 | |
| cd07378 | 277 | MPP_ACP5 Homo sapiens acid phosphatase 5 and relat | 100.0 | |
| KOG2679 | 336 | consensus Purple (tartrate-resistant) acid phospha | 100.0 | |
| cd07395 | 262 | MPP_CSTP1 Homo sapiens CSTP1 and related proteins, | 99.96 | |
| PF09423 | 453 | PhoD: PhoD-like phosphatase; InterPro: IPR018946 T | 99.95 | |
| cd07402 | 240 | MPP_GpdQ Enterobacter aerogenes GpdQ and related p | 99.93 | |
| cd07396 | 267 | MPP_Nbla03831 Homo sapiens Nbla03831 and related p | 99.92 | |
| PRK11148 | 275 | cyclic 3',5'-adenosine monophosphate phosphodieste | 99.9 | |
| COG3540 | 522 | PhoD Phosphodiesterase/alkaline phosphatase D [Ino | 99.89 | |
| cd07401 | 256 | MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metal | 99.89 | |
| cd07399 | 214 | MPP_YvnB Bacillus subtilis YvnB and related protei | 99.85 | |
| cd00842 | 296 | MPP_ASMase acid sphingomyelinase and related prote | 99.81 | |
| cd08163 | 257 | MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related | 99.75 | |
| PF00149 | 200 | Metallophos: Calcineurin-like phosphoesterase; Int | 99.74 | |
| cd07383 | 199 | MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase | 99.7 | |
| cd07393 | 232 | MPP_DR1119 Deinococcus radiodurans DR1119 and rela | 99.69 | |
| cd07392 | 188 | MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and rel | 99.66 | |
| TIGR03767 | 496 | P_acnes_RR metallophosphoesterase, PPA1498 family. | 99.66 | |
| TIGR03729 | 239 | acc_ester putative phosphoesterase. Members of thi | 99.64 | |
| cd07385 | 223 | MPP_YkuE_C Bacillus subtilis YkuE and related prot | 99.59 | |
| cd07400 | 144 | MPP_YydB Bacillus subtilis YydB and related protei | 99.58 | |
| cd07404 | 166 | MPP_MS158 Microscilla MS158 and related proteins, | 99.56 | |
| COG1409 | 301 | Icc Predicted phosphohydrolases [General function | 99.54 | |
| TIGR03768 | 492 | RPA4764 metallophosphoesterase, RPA4764 family. Th | 99.52 | |
| cd00840 | 223 | MPP_Mre11_N Mre11 nuclease, N-terminal metallophos | 99.5 | |
| cd07388 | 224 | MPP_Tt1561 Thermus thermophilus Tt1561 and related | 99.5 | |
| PRK11340 | 271 | phosphodiesterase YaeI; Provisional | 99.46 | |
| PF14008 | 62 | Metallophos_C: Iron/zinc purple acid phosphatase-l | 99.45 | |
| cd00838 | 131 | MPP_superfamily metallophosphatase superfamily, me | 99.37 | |
| KOG1432 | 379 | consensus Predicted DNA repair exonuclease SIA1 [G | 99.37 | |
| PF12850 | 156 | Metallophos_2: Calcineurin-like phosphoesterase su | 99.3 | |
| cd07379 | 135 | MPP_239FB Homo sapiens 239FB and related proteins, | 99.22 | |
| COG1408 | 284 | Predicted phosphohydrolases [General function pred | 99.22 | |
| PRK05340 | 241 | UDP-2,3-diacylglucosamine hydrolase; Provisional | 99.1 | |
| cd08166 | 195 | MPP_Cdc1_like_1 uncharacterized subgroup related t | 99.09 | |
| cd07389 | 228 | MPP_PhoD Bacillus subtilis PhoD and related protei | 99.08 | |
| cd07397 | 238 | MPP_DevT Myxococcus xanthus DevT and related prote | 99.08 | |
| cd00841 | 155 | MPP_YfcE Escherichia coli YfcE and related protein | 99.07 | |
| cd07394 | 178 | MPP_Vps29 Homo sapiens Vps29 and related proteins, | 99.01 | |
| TIGR00040 | 158 | yfcE phosphoesterase, MJ0936 family. Members of th | 99.0 | |
| COG1768 | 230 | Predicted phosphohydrolase [General function predi | 99.0 | |
| cd07403 | 129 | MPP_TTHA0053 Thermus thermophilus TTHA0053 and rel | 98.97 | |
| cd08165 | 156 | MPP_MPPE1 human MPPE1 and related proteins, metall | 98.97 | |
| cd07384 | 171 | MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and re | 98.97 | |
| COG2129 | 226 | Predicted phosphoesterases, related to the Icc pro | 98.96 | |
| PF14582 | 255 | Metallophos_3: Metallophosphoesterase, calcineurin | 98.93 | |
| TIGR01854 | 231 | lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. | 98.9 | |
| TIGR00583 | 405 | mre11 DNA repair protein (mre11). All proteins in | 98.88 | |
| PRK09453 | 182 | phosphodiesterase; Provisional | 98.78 | |
| cd00845 | 252 | MPP_UshA_N_like Escherichia coli UshA-like family, | 98.74 | |
| KOG3770 | 577 | consensus Acid sphingomyelinase and PHM5 phosphate | 98.73 | |
| cd08164 | 193 | MPP_Ted1 Saccharomyces cerevisiae Ted1 and related | 98.68 | |
| cd07398 | 217 | MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and relat | 98.64 | |
| cd07406 | 257 | MPP_CG11883_N Drosophila melanogaster CG11883 and | 98.61 | |
| cd07410 | 277 | MPP_CpdB_N Escherichia coli CpdB and related prote | 98.57 | |
| cd00844 | 262 | MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-t | 98.52 | |
| COG0420 | 390 | SbcD DNA repair exonuclease [DNA replication, reco | 98.47 | |
| COG0622 | 172 | Predicted phosphoesterase [General function predic | 98.41 | |
| cd07408 | 257 | MPP_SA0022_N Staphylococcus aureus SA0022 and rela | 98.31 | |
| cd07382 | 255 | MPP_DR1281 Deinococcus radiodurans DR1281 and rela | 98.31 | |
| cd07412 | 288 | MPP_YhcR_N Bacillus subtilis YhcR endonuclease and | 98.3 | |
| cd07411 | 264 | MPP_SoxB_N Thermus thermophilus SoxB and related p | 98.26 | |
| cd07407 | 282 | MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and | 98.25 | |
| cd07409 | 281 | MPP_CD73_N CD73 ecto-5'-nucleotidase and related p | 98.23 | |
| TIGR00619 | 253 | sbcd exonuclease SbcD. This family is based on the | 98.21 | |
| PRK04036 | 504 | DNA polymerase II small subunit; Validated | 98.2 | |
| KOG3662 | 410 | consensus Cell division control protein/predicted | 98.19 | |
| cd07386 | 243 | MPP_DNA_pol_II_small_archeal_C archeal DNA polymer | 98.17 | |
| cd07405 | 285 | MPP_UshA_N Escherichia coli UshA and related prote | 98.14 | |
| TIGR00282 | 266 | metallophosphoesterase, MG_246/BB_0505 family. A m | 98.14 | |
| COG2908 | 237 | Uncharacterized protein conserved in bacteria [Fun | 98.13 | |
| PRK09419 | 1163 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 98.12 | |
| cd07425 | 208 | MPP_Shelphs Shewanella-like phosphatases, metallop | 98.06 | |
| PRK10966 | 407 | exonuclease subunit SbcD; Provisional | 98.04 | |
| PHA02546 | 340 | 47 endonuclease subunit; Provisional | 98.04 | |
| COG0737 | 517 | UshA 5'-nucleotidase/2',3'-cyclic phosphodiesteras | 97.94 | |
| PRK09558 | 551 | ushA bifunctional UDP-sugar hydrolase/5'-nucleotid | 97.92 | |
| cd07380 | 150 | MPP_CWF19_N Schizosaccharomyces pombe CWF19 and re | 97.91 | |
| cd08162 | 313 | MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA | 97.85 | |
| TIGR01530 | 550 | nadN NAD pyrophosphatase/5'-nucleotidase NadN. Thi | 97.78 | |
| cd07391 | 172 | MPP_PF1019 Pyrococcus furiosus PF1019 and related | 97.71 | |
| PHA02239 | 235 | putative protein phosphatase | 97.59 | |
| cd07424 | 207 | MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase do | 97.44 | |
| PRK00166 | 275 | apaH diadenosine tetraphosphatase; Reviewed | 97.41 | |
| PRK11907 | 814 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 97.38 | |
| TIGR00024 | 225 | SbcD_rel_arch putative phosphoesterase, SbcD/Mre11 | 97.32 | |
| PRK09419 | 1163 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 97.31 | |
| COG1692 | 266 | Calcineurin-like phosphoesterase [General function | 97.29 | |
| cd07423 | 234 | MPP_PrpE Bacillus subtilis PrpE and related protei | 97.29 | |
| PRK13625 | 245 | bis(5'-nucleosyl)-tetraphosphatase PrpE; Provision | 97.11 | |
| PRK09968 | 218 | serine/threonine-specific protein phosphatase 2; P | 97.11 | |
| cd07390 | 168 | MPP_AQ1575 Aquifex aeolicus AQ1575 and related pro | 97.03 | |
| PRK09418 | 780 | bifunctional 2',3'-cyclic nucleotide 2'-phosphodie | 96.99 | |
| PRK11439 | 218 | pphA serine/threonine protein phosphatase 1; Provi | 96.97 | |
| KOG2863 | 456 | consensus RNA lariat debranching enzyme [RNA proce | 96.97 | |
| cd07387 | 257 | MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2 | 96.96 | |
| cd07422 | 257 | MPP_ApaH Escherichia coli ApaH and related protein | 96.87 | |
| TIGR01390 | 626 | CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphod | 96.83 | |
| cd07413 | 222 | MPP_PA3087 Pseudomonas aeruginosa PA3087 and relat | 96.8 | |
| cd07381 | 239 | MPP_CapA CapA and related proteins, metallophospha | 96.77 | |
| cd00144 | 225 | MPP_PPP_family phosphoprotein phosphatases of the | 96.71 | |
| smart00854 | 239 | PGA_cap Bacterial capsule synthesis protein PGA_ca | 96.64 | |
| PRK09420 | 649 | cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosp | 96.64 | |
| cd07421 | 304 | MPP_Rhilphs Rhilph phosphatases, metallophosphatas | 96.62 | |
| COG1407 | 235 | Predicted ICC-like phosphoesterases [General funct | 96.53 | |
| TIGR00668 | 279 | apaH bis(5'-nucleosyl)-tetraphosphatase (symmetric | 96.43 | |
| KOG3325 | 183 | consensus Membrane coat complex Retromer, subunit | 96.21 | |
| PF00041 | 85 | fn3: Fibronectin type III domain; InterPro: IPR003 | 96.13 | |
| COG5555 | 392 | Cytolysin, a secreted calcineurin-like phosphatase | 95.96 | |
| KOG2310 | 646 | consensus DNA repair exonuclease MRE11 [Replicatio | 95.77 | |
| cd07420 | 321 | MPP_RdgC Drosophila melanogaster RdgC and related | 95.77 | |
| KOG4419 | 602 | consensus 5' nucleotidase [Nucleotide transport an | 95.67 | |
| cd07416 | 305 | MPP_PP2B PP2B, metallophosphatase domain. PP2B (ca | 95.61 | |
| smart00156 | 271 | PP2Ac Protein phosphatase 2A homologues, catalytic | 95.12 | |
| PF13277 | 253 | YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C. | 95.07 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 95.07 | |
| cd07418 | 377 | MPP_PP7 PP7, metallophosphatase domain. PP7 is a p | 95.03 | |
| cd07415 | 285 | MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein | 94.97 | |
| cd07414 | 293 | MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzyme | 94.71 | |
| COG1311 | 481 | HYS2 Archaeal DNA polymerase II, small subunit/DNA | 94.67 | |
| PTZ00239 | 303 | serine/threonine protein phosphatase 2A; Provision | 94.31 | |
| COG4186 | 186 | Predicted phosphoesterase or phosphohydrolase [Gen | 94.27 | |
| PTZ00480 | 320 | serine/threonine-protein phosphatase; Provisional | 94.27 | |
| cd07417 | 316 | MPP_PP5_C PP5, C-terminal metallophosphatase domai | 93.85 | |
| KOG3947 | 305 | consensus Phosphoesterases [General function predi | 93.51 | |
| PF09587 | 250 | PGA_cap: Bacterial capsule synthesis protein PGA_c | 93.25 | |
| PTZ00244 | 294 | serine/threonine-protein phosphatase PP1; Provisio | 93.02 | |
| cd07419 | 311 | MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase a | 92.54 | |
| cd00063 | 93 | FN3 Fibronectin type 3 domain; One of three types | 91.95 | |
| smart00060 | 83 | FN3 Fibronectin type 3 domain. One of three types | 88.73 | |
| PF04042 | 209 | DNA_pol_E_B: DNA polymerase alpha/epsilon subunit | 84.22 | |
| KOG4221 | 1381 | consensus Receptor mediating netrin-dependent axon | 82.19 |
| >KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-76 Score=556.04 Aligned_cols=388 Identities=41% Similarity=0.662 Sum_probs=333.5
Q ss_pred CeeeccCCCCCcEEEEEEcCCCCCCCEEEEeecCCCC-----ceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEE
Q 040421 1 VHITQGDHEGKGVIVSWVTPDEPGSNTVLYWAENSTL-----KQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYE 75 (407)
Q Consensus 1 v~l~~g~~~~~~~~v~W~t~~~~~~~~v~y~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~ 75 (407)
|||++++... +|+|+|.|.+. ....|+||...... ...+.+.+..+...++..+++|+|+|++|+|+|+|||+
T Consensus 48 vhlS~~~~~~-~m~VswvT~~~-~~~~V~Yg~~~~~~~~~~~~~~~~~~~~~y~~~~~~sg~ih~~~~~~L~~~t~YyY~ 125 (452)
T KOG1378|consen 48 VHLSFTDNLN-EMRVSWVTGDG-EENVVRYGEVKDKLDNSAARGMTEAWTDGYANGWRDSGYIHDAVMKNLEPNTRYYYQ 125 (452)
T ss_pred EEEeccCCCC-cEEEEEeCCCC-CCceEEEeecCCCccccccccceEEEecccccccceeeeEeeeeecCCCCCceEEEE
Confidence 7999999865 99999999864 34999999865542 22333333333333467899999999999999999999
Q ss_pred eCcC-CceeeEEEEcCCCCCCCCCcEEEEEecCCCCCCchhhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHH
Q 040421 76 VGVG-NATRQFSFTTPPGVGPDVPYTFGLIGDLGQTYYSNRTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWG 154 (407)
Q Consensus 76 v~~~-~~s~~~~F~T~p~~~~~~~~~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~ 154 (407)
|+++ .||++++|+|+| ++..+.+|+++||++.......++....++. ++|+|||+||++|+++..+ .+||+|.
T Consensus 126 ~Gs~~~wS~~f~F~t~p--~~~~~~~~~i~GDlG~~~~~~s~~~~~~~~~-k~d~vlhiGDlsYa~~~~n---~~wD~f~ 199 (452)
T KOG1378|consen 126 VGSDLKWSEIFSFKTPP--GQDSPTRAAIFGDMGCTEPYTSTLRNQEENL-KPDAVLHIGDLSYAMGYSN---WQWDEFG 199 (452)
T ss_pred eCCCCCcccceEeECCC--CccCceeEEEEccccccccccchHhHHhccc-CCcEEEEecchhhcCCCCc---cchHHHH
Confidence 9997 589999999998 3458999999999999887766777666663 7999999999999988643 6999999
Q ss_pred HHHhhhhccCCeEEccCCCccccCCCCCCcccccccccccccCCCCCCCCCCeEEEEecCcEEEEEEeccccC--CCChH
Q 040421 155 RFIERNAAYQPWIWTVGNHEIDFAPQLGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRRASAHIIVMSCYSAF--GKYTP 232 (407)
Q Consensus 155 ~~~~~~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ysf~~g~v~fi~Lds~~~~--~~~~~ 232 (407)
++++++++.+|+|++.||||..+.+.. .|.+|.++|.||.+++.+..+.||||++|++|||+|+|+.++ ....+
T Consensus 200 r~vEp~As~vPymv~~GNHE~d~~~~~----~F~~y~~Rf~mP~~~s~s~~~l~YSfd~G~vhfv~lsse~~~~~~~~~~ 275 (452)
T KOG1378|consen 200 RQVEPIASYVPYMVCSGNHEIDWPPQP----CFVPYSARFNMPGNSSESDSNLYYSFDVGGVHFVVLSTETYYNFLKGTA 275 (452)
T ss_pred hhhhhhhccCceEEecccccccCCCcc----cccccceeeccCCCcCCCCCceeEEEeeccEEEEEEeccccccccccch
Confidence 999999999999999999999765433 588999999999998887888999999999999999998875 34689
Q ss_pred HHHHHHHhccccCCCCCCeEEEEeeccccccCCC-CCCCCh--hHHHHHHHHHHhCCCcEEEecccccccccccccccee
Q 040421 233 QYKWLEKEFPKVNRSETPWLIVLMHCPLYNSYVH-HYMEGE--PMRVLYEPWFVEYKVDVVFAAHVHAYERSERMSNIAY 309 (407)
Q Consensus 233 Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~-~~~~~~--~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~~~~~~ 309 (407)
|++||+++|++++|.+.||+||++|+|+|++... +.++++ .+|..|++||.+++||++|+||.|+|||++|+++.++
T Consensus 276 QY~WL~~dL~~v~r~~tPWlIv~~HrP~Y~S~~~~~~reG~~~~~~~~LE~l~~~~~VDvvf~GHvH~YER~~piyn~~~ 355 (452)
T KOG1378|consen 276 QYQWLERDLASVDRKKTPWLIVQGHRPMYCSSNDAHYREGEFESMREGLEPLFVKYKVDVVFWGHVHRYERFCPIYNNTC 355 (452)
T ss_pred HHHHHHHHHHHhcccCCCeEEEEecccceecCCchhhccCcchhhHHHHHHHHHHhceeEEEeccceehhccchhhccee
Confidence 9999999999998776899999999999998874 556665 7889999999999999999999999999999999987
Q ss_pred eccCCcccccCCCCCceEEEeCCCCCCCCCcccCCCCCCCccceeeCcceEEEEEEeeccEEEEEEEEcCCCceeeeeeE
Q 040421 310 NVTNALCSPVSDQSAPVYITIGDGGNQEGLAKEMTEPQPRYSAYREASFGHGILDVKNRTHAYFGWHRNQDDYAVEADSV 389 (407)
Q Consensus 310 ~~~~g~~~~~~~~~g~~~iv~G~gG~~~~~~~~~~~~~p~~~~~~~~~~Gf~~l~v~~~~~~~~~~~~~~~g~~~~~D~~ 389 (407)
....+ +.++.++.+|+||++|+||+.++... ...++|+||++|+.+|||++|++.|+||+.++++++.|++.++.|+|
T Consensus 356 ~~~~~-~~~~~d~~aPvyI~~G~~G~~e~~~~-~~~~~p~~Sa~R~~dfG~~~L~v~N~TH~~~~~~~~~d~~g~~~D~f 433 (452)
T KOG1378|consen 356 GTGWG-PVHLVDGMAPIYITVGDGGNHEHLDP-FSSPQPEWSAFREGDFGYTRLTAKNGTHAHVHWVRNSDASGVVIDSF 433 (452)
T ss_pred eccCC-cccccCCCCCEEEEEccCCcccccCc-ccCCCCcccccccccCCeEEEEEecCceEEEEEEeccCCCceEeeeE
Confidence 76666 78889999999999999999887643 34479999999999999999999999999999999877655567999
Q ss_pred EEEecccCCCCCC
Q 040421 390 WLHNRYWKPSGEL 402 (407)
Q Consensus 390 ~i~~~~~~~~~~~ 402 (407)
+|.|+.+.+....
T Consensus 434 wl~k~~~~~~~~~ 446 (452)
T KOG1378|consen 434 WLIKDYRDMVVGV 446 (452)
T ss_pred EEEcccCcccccc
Confidence 9999988876553
|
|
| >PLN02533 probable purple acid phosphatase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-73 Score=555.14 Aligned_cols=374 Identities=39% Similarity=0.712 Sum_probs=316.7
Q ss_pred CeeeccCCCCCcEEEEEEcCCCCCCCEEEEeecCCCCceEEEEEEEEEEe-cCCcceeEEEEEEcCCCCCCEEEEEeCcC
Q 040421 1 VHITQGDHEGKGVIVSWVTPDEPGSNTVLYWAENSTLKQQAHGIVLTYNY-FNYTSNCIHHCTIEDLEFDTKYYYEVGVG 79 (407)
Q Consensus 1 v~l~~g~~~~~~~~v~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~~ 79 (407)
|||+++. .++|+|+|.|.+. ..+.|+||++++.+..++.+++.+|.. ....++++|+|+|+||+|+|+|+|||+..
T Consensus 47 vhls~~~--~~~m~V~W~T~~~-~~~~V~yG~~~~~l~~~a~g~~~~~~~~~~~~~g~iH~v~l~~L~p~T~Y~Yrvg~~ 123 (427)
T PLN02533 47 VHISLVG--PDKMRISWITQDS-IPPSVVYGTVSGKYEGSANGTSSSYHYLLIYRSGQINDVVIGPLKPNTVYYYKCGGP 123 (427)
T ss_pred EEEEEcC--CCeEEEEEECCCC-CCCEEEEecCCCCCcceEEEEEEEEeccccccCCeEEEEEeCCCCCCCEEEEEECCC
Confidence 7999997 4799999999864 568999999988888888888877764 23457899999999999999999999987
Q ss_pred CceeeEEEEcCCCCCCCCCcEEEEEecCCCCCCchhhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhh
Q 040421 80 NATRQFSFTTPPGVGPDVPYTFGLIGDLGQTYYSNRTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIER 159 (407)
Q Consensus 80 ~~s~~~~F~T~p~~~~~~~~~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~ 159 (407)
.+|+.++|+|+|.. .++||+++||+|.......+++++.+. +|||||++||++|+++ .+..|+.|++++++
T Consensus 124 ~~s~~~~F~T~p~~---~~~~f~v~GDlG~~~~~~~tl~~i~~~--~pD~vl~~GDl~y~~~----~~~~wd~f~~~i~~ 194 (427)
T PLN02533 124 SSTQEFSFRTPPSK---FPIKFAVSGDLGTSEWTKSTLEHVSKW--DYDVFILPGDLSYANF----YQPLWDTFGRLVQP 194 (427)
T ss_pred CCccceEEECCCCC---CCeEEEEEEeCCCCcccHHHHHHHHhc--CCCEEEEcCccccccc----hHHHHHHHHHHhhh
Confidence 77899999998853 689999999998765555677777664 8999999999999754 25689999999999
Q ss_pred hhccCCeEEccCCCccccCCCCCCcccccccccccccCCCCCCCCCCeEEEEecCcEEEEEEeccccCCCChHHHHHHHH
Q 040421 160 NAAYQPWIWTVGNHEIDFAPQLGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRRASAHIIVMSCYSAFGKYTPQYKWLEK 239 (407)
Q Consensus 160 ~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ysf~~g~v~fi~Lds~~~~~~~~~Q~~WL~~ 239 (407)
+.+.+|+|+++||||....+.. ....|..|..+|.||..+.+...+.||||++|++|||+||++.++....+|++||++
T Consensus 195 l~s~~P~m~~~GNHE~~~~~~~-~~~~f~~y~~rf~mP~~~~g~~~~~yYSfd~g~vhfI~Lds~~~~~~~~~Q~~WLe~ 273 (427)
T PLN02533 195 LASQRPWMVTHGNHELEKIPIL-HPEKFTAYNARWRMPFEESGSTSNLYYSFNVYGVHIIMLGSYTDFEPGSEQYQWLEN 273 (427)
T ss_pred HhhcCceEEeCccccccccccc-cCcCccchhhcccCCccccCCCCCceEEEEECCEEEEEEeCCccccCchHHHHHHHH
Confidence 9999999999999998643211 123467788999999876666678999999999999999999877778999999999
Q ss_pred hccccCCCCCCeEEEEeeccccccCCCCCCC--ChhHHHHHHHHHHhCCCcEEEeccccccccccccccceeeccCCccc
Q 040421 240 EFPKVNRSETPWLIVLMHCPLYNSYVHHYME--GEPMRVLYEPWFVEYKVDVVFAAHVHAYERSERMSNIAYNVTNALCS 317 (407)
Q Consensus 240 ~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~--~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~~~~~~~~~~g~~~ 317 (407)
+|+++++++.+|+||++|+|+|++...+... ...+++.|++||++++||++|+||+|.|||++|+++++ +
T Consensus 274 dL~~~~r~~~pwiIv~~H~P~y~s~~~~~~~~~~~~~r~~le~Ll~~~~VdlvlsGH~H~YeR~~p~~~~~-------~- 345 (427)
T PLN02533 274 NLKKIDRKTTPWVVAVVHAPWYNSNEAHQGEKESVGMKESMETLLYKARVDLVFAGHVHAYERFDRVYQGK-------T- 345 (427)
T ss_pred HHHhhcccCCCEEEEEeCCCeeecccccCCcchhHHHHHHHHHHHHHhCCcEEEecceecccccccccCCc-------c-
Confidence 9999877788999999999999876543222 24578899999999999999999999999999987654 2
Q ss_pred ccCCCCCceEEEeCCCCCCCCCcccCCCCCCCccceeeCcceEEEEEEeeccEEEEEEEEcCCCceeeeeeEEEEecccC
Q 040421 318 PVSDQSAPVYITIGDGGNQEGLAKEMTEPQPRYSAYREASFGHGILDVKNRTHAYFGWHRNQDDYAVEADSVWLHNRYWK 397 (407)
Q Consensus 318 ~~~~~~g~~~iv~G~gG~~~~~~~~~~~~~p~~~~~~~~~~Gf~~l~v~~~~~~~~~~~~~~~g~~~~~D~~~i~~~~~~ 397 (407)
+++|++||++|+||+.++....+..++|+|+++++..|||++|+|.|.+++.|+|+++.+|+.++.|+|+|.|--..
T Consensus 346 ---~~~gpvyiv~G~gG~~e~~~~~~~~~~~~~s~~r~~~~G~~~l~v~n~t~l~~~~~~~~~~~~~~~D~~~i~~~~~~ 422 (427)
T PLN02533 346 ---DKCGPVYITIGDGGNREGLATKYIDPKPDISLFREASFGHGQLNVVDANTMEWTWHRNDDDQSVASDSVWLKSLLTE 422 (427)
T ss_pred ---CCCCCEEEEeCCCccccccccccCCCCCCceeEEeccCCEEEEEEEcCCeEEEEEEecCCCCceeeeEEEEEeccCC
Confidence 46899999999999988764455667889999999999999999999999999999988886545899999986544
Q ss_pred C
Q 040421 398 P 398 (407)
Q Consensus 398 ~ 398 (407)
|
T Consensus 423 ~ 423 (427)
T PLN02533 423 P 423 (427)
T ss_pred C
Confidence 4
|
|
| >cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-49 Score=370.87 Aligned_cols=287 Identities=44% Similarity=0.770 Sum_probs=223.6
Q ss_pred CCCcEEEEEecCCCC-CCchhhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccCCeEEccCCCc
Q 040421 96 DVPYTFGLIGDLGQT-YYSNRTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHE 174 (407)
Q Consensus 96 ~~~~~f~~~gD~~~~-~~~~~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD 174 (407)
..++||+++||+|.. .....+++++.+...+|||||++||++|+.+.. ...+|+.|++.++++...+|+++++||||
T Consensus 2 ~~~~~f~v~gD~~~~~~~~~~~~~~l~~~~~~~d~vl~~GDl~~~~~~~--~~~~~~~~~~~~~~~~~~~P~~~~~GNHD 79 (294)
T cd00839 2 DTPFKFAVFGDMGQNTNNSTNTLDHLEKELGNYDAILHVGDLAYADGYN--NGSRWDTFMRQIEPLASYVPYMVTPGNHE 79 (294)
T ss_pred CCcEEEEEEEECCCCCCCcHHHHHHHHhccCCccEEEEcCchhhhcCCc--cchhHHHHHHHHHHHHhcCCcEEcCcccc
Confidence 368999999999974 445677888777424899999999999976532 23689999999999988999999999999
Q ss_pred cccCCCCCCcccccccccccccCCCCCCCCCCeEEEEecCcEEEEEEeccccC---CCChHHHHHHHHhccccCCCCCCe
Q 040421 175 IDFAPQLGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRRASAHIIVMSCYSAF---GKYTPQYKWLEKEFPKVNRSETPW 251 (407)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ysf~~g~v~fi~Lds~~~~---~~~~~Q~~WL~~~L~~~~~~~~~~ 251 (407)
......... ...+..++.++........+.||+|++|++|||+|||+... ....+|++||+++|+++++.+.+|
T Consensus 80 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~Ysf~~g~v~fi~Lds~~~~~~~~~~~~q~~WL~~~L~~~~~~~~~~ 156 (294)
T cd00839 80 ADYNFSFYK---IKAFFPRFRFPHSPSGSTSNLWYSFDVGPVHFVSLSTEVDFYGDGPGSPQYDWLEADLAKVDRSKTPW 156 (294)
T ss_pred cccCCCCcc---cccccccccccCCCCCCCCCceEEEeeCCEEEEEEecccccccCCCCcHHHHHHHHHHHHhcccCCCe
Confidence 964321110 01111123334333344567899999999999999997654 457899999999999876556789
Q ss_pred EEEEeeccccccCCCCCC--CChhHHHHHHHHHHhCCCcEEEeccccccccccccccceeeccCCcccccCCCCCceEEE
Q 040421 252 LIVLMHCPLYNSYVHHYM--EGEPMRVLYEPWFVEYKVDVVFAAHVHAYERSERMSNIAYNVTNALCSPVSDQSAPVYIT 329 (407)
Q Consensus 252 ~iv~~H~P~~~~~~~~~~--~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~g~~~iv 329 (407)
+||++|+|+|+....... .....++.|.+||++++|+++|+||+|.|+|++|+++++.. +.+..+.+++|++||+
T Consensus 157 ~iv~~H~P~~~~~~~~~~~~~~~~~~~~l~~ll~~~~v~~vl~GH~H~y~r~~p~~~~~~~---~~~~~~~~~~g~~yiv 233 (294)
T cd00839 157 IIVMGHRPMYCSNTDHDDCIEGEKMRAALEDLFYKYGVDLVLSGHVHAYERTCPVYNGTVV---GDCNPYSNPKGPVHIV 233 (294)
T ss_pred EEEEeccCcEecCccccccchhHHHHHHHHHHHHHhCCCEEEEccceeeEeechhhCCEec---cccccccCCCccEEEE
Confidence 999999999987654322 23567889999999999999999999999999999876521 3444567889999999
Q ss_pred eCCCCCCCCCcccCCCCCCCccceeeCcceEEEEEEeeccEEEEEEEEcCCCceeeeeeEEEEe
Q 040421 330 IGDGGNQEGLAKEMTEPQPRYSAYREASFGHGILDVKNRTHAYFGWHRNQDDYAVEADSVWLHN 393 (407)
Q Consensus 330 ~G~gG~~~~~~~~~~~~~p~~~~~~~~~~Gf~~l~v~~~~~~~~~~~~~~~g~~~~~D~~~i~~ 393 (407)
+|+||+....... ..+.++|++++...+||++|++.++++|.++|+++.+|+++ |+|+|.|
T Consensus 234 ~G~~G~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~t~l~~~~~~~~~g~v~--D~f~i~k 294 (294)
T cd00839 234 IGAGGNDEGLDPF-SAPPPAWSAFRESDYGFGRLTVHNSTHLHFEWIRNDDGVVI--DSFWIIK 294 (294)
T ss_pred ECCCccccCcCcc-cCCCCCceEEEeccCCEEEEEEEecCeEEEEEEECCCCeEE--EEEEEeC
Confidence 9999998764211 11235789888889999999998888999999998899986 9999986
|
Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver |
| >PTZ00422 glideosome-associated protein 50; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-39 Score=301.69 Aligned_cols=259 Identities=14% Similarity=0.206 Sum_probs=194.5
Q ss_pred CCCcEEEEEecCCCCCCchhh----HHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhH-HHHHHhhhh--ccCCeEE
Q 040421 96 DVPYTFGLIGDLGQTYYSNRT----LTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDT-WGRFIERNA--AYQPWIW 168 (407)
Q Consensus 96 ~~~~~f~~~gD~~~~~~~~~~----l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~-~~~~~~~~~--~~~P~~~ 168 (407)
...++|+++||+|.+...+.. |.++.++ .++||||.+||++ .+|..+.++.+|+. |.+.+.... .++||++
T Consensus 24 ~~~l~F~~vGDwG~g~~~Q~~VA~~M~~~~~~-~~~~FVls~GDNF-~~Gv~sv~Dp~f~~~FE~vY~~~s~~L~~Pwy~ 101 (394)
T PTZ00422 24 KAQLRFASLGNWGTGSKQQKLVASYLKQYAKN-ERVTFLVSPGSNF-PGGVDGLNDPKWKHCFENVYSEESGDMQIPFFT 101 (394)
T ss_pred CCeEEEEEEecCCCCchhHHHHHHHHHHHHHh-CCCCEEEECCccc-cCCCCCccchhHHhhHhhhccCcchhhCCCeEE
Confidence 468999999999986655544 3445555 4899999999999 67877777888876 556665544 5789999
Q ss_pred ccCCCccccCCCCCCccc-c---------------c---ccccccccCCCCCCCCCCeEEEE----ec------------
Q 040421 169 TVGNHEIDFAPQLGEAIP-F---------------K---PFANRFHLPYRAPYSTAPFWYSI----RR------------ 213 (407)
Q Consensus 169 ~~GNHD~~~~~~~~~~~~-~---------------~---~~~~~f~~P~~~~~~~~~~~ysf----~~------------ 213 (407)
|+||||+..+. .++.. + . ....+|.||. .||++ ..
T Consensus 102 vLGNHDy~Gn~--~AQi~r~~~~y~~~~~~~~~~y~~~~~~~~RW~mP~--------~yY~~~~~f~~~~~~~~~~~~~~ 171 (394)
T PTZ00422 102 VLGQADWDGNY--NAELLKGQNVYLNGHGQTDIEYDSNNDIYPKWIMPN--------YWYHYFTHFTDTSGPSLLKSGHK 171 (394)
T ss_pred eCCcccccCCc--hhhhccccccccccccccccccccccccCCCccCCc--------hhheeeeeeecccccccccccCC
Confidence 99999996432 12111 1 0 1236888885 57754 21
Q ss_pred -CcEEEEEEecccc-----CC-CChHHHHHHHHhccccCCCCCCeEEEEeeccccccCCCCCCCChhHHHHHHHHHHhCC
Q 040421 214 -ASAHIIVMSCYSA-----FG-KYTPQYKWLEKEFPKVNRSETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYK 286 (407)
Q Consensus 214 -g~v~fi~Lds~~~-----~~-~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~ 286 (407)
..+.||+|||..- +. ....|++||+++|+.+ ++.++|+||++|||+|+++.++ ....+++.|+|||++|+
T Consensus 172 ~~~v~fifiDT~~l~~~~~~~~~~~~~w~~L~~~L~~a-~k~a~WkIVvGHhPIySsG~hg--~~~~L~~~L~PLL~ky~ 248 (394)
T PTZ00422 172 DMSVAFIFIDTWILSSSFPYKKVSERAWQDLKATLEYA-PKIADYIIVVGDKPIYSSGSSK--GDSYLSYYLLPLLKDAQ 248 (394)
T ss_pred CCEEEEEEEECchhcccCCccccCHHHHHHHHHHHHhh-ccCCCeEEEEecCceeecCCCC--CCHHHHHHHHHHHHHcC
Confidence 2389999999531 11 2467899999999654 2567899999999999988643 34668899999999999
Q ss_pred CcEEEeccccccccccccccceeeccCCcccccCCCCCceEEEeCCCCCCCCCcccCCCCCCCccceeeCcceEEEEEEe
Q 040421 287 VDVVFAAHVHAYERSERMSNIAYNVTNALCSPVSDQSAPVYITIGDGGNQEGLAKEMTEPQPRYSAYREASFGHGILDVK 366 (407)
Q Consensus 287 vdlvl~GH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~g~~~iv~G~gG~~~~~~~~~~~~~p~~~~~~~~~~Gf~~l~v~ 366 (407)
||++|+||+|+|||.. .+++.||++|+||...+. . . ..++++.|....+||+.+++
T Consensus 249 VdlYisGHDH~lq~i~-------------------~~gt~yIvSGaGs~~~~~--~-~-~~~~~s~F~~~~~GF~~~~l- 304 (394)
T PTZ00422 249 VDLYISGYDRNMEVLT-------------------DEGTAHINCGSGGNSGRK--S-I-MKNSKSLFYSEDIGFCIHEL- 304 (394)
T ss_pred cCEEEEccccceEEec-------------------CCCceEEEeCccccccCC--C-C-CCCCCcceecCCCCEEEEEE-
Confidence 9999999999999985 256889999999886542 1 1 23357888888899999998
Q ss_pred eccEEEEEEEEcCCCceeeeeeEEEEecc
Q 040421 367 NRTHAYFGWHRNQDDYAVEADSVWLHNRY 395 (407)
Q Consensus 367 ~~~~~~~~~~~~~~g~~~~~D~~~i~~~~ 395 (407)
+++.++++|+.+.+|+++ +++++.++.
T Consensus 305 ~~~~l~~~fid~~~GkvL--~~~~~~~~~ 331 (394)
T PTZ00422 305 NAEGMVTKFVSGNTGEVL--YTHKQPLKK 331 (394)
T ss_pred ecCEEEEEEEeCCCCcEE--EEeeecccc
Confidence 566799999865789987 999886653
|
|
| >cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-35 Score=274.01 Aligned_cols=248 Identities=21% Similarity=0.381 Sum_probs=176.3
Q ss_pred cEEEEEecCCCC-CCch----hhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhh-hHHHHHHhhhhccCCeEEccCC
Q 040421 99 YTFGLIGDLGQT-YYSN----RTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRW-DTWGRFIERNAAYQPWIWTVGN 172 (407)
Q Consensus 99 ~~f~~~gD~~~~-~~~~----~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~-~~~~~~~~~~~~~~P~~~~~GN 172 (407)
++|+++||+|.. ...+ ..+.++++. .+|||||++||++|+++........| +.|.+.++.+...+|+++++||
T Consensus 1 ~~f~~~gD~g~~~~~~~~~~~~~~~~~~~~-~~~dfvv~~GD~~y~~g~~~~~~~~~~~~~~~~~~~~~~~~P~~~v~GN 79 (277)
T cd07378 1 LRFLALGDWGGGGTAGQKAVAKAMAKVAAE-LGPDFILSLGDNFYDDGVGSVDDPRFETTFEDVYSAPSLQVPWYLVLGN 79 (277)
T ss_pred CeEEEEeecCCCCCHHHHHHHHHHHHHHHh-cCCCEEEeCCCccccCCCCCCcchHHHHHHHHHccchhhcCCeEEecCC
Confidence 589999999986 2322 233444444 48999999999999887543333444 3455555555567999999999
Q ss_pred CccccCCCCCCcccccc--cccccccCCCCCCCCCCeEEEEecC------cEEEEEEeccccC---------------CC
Q 040421 173 HEIDFAPQLGEAIPFKP--FANRFHLPYRAPYSTAPFWYSIRRA------SAHIIVMSCYSAF---------------GK 229 (407)
Q Consensus 173 HD~~~~~~~~~~~~~~~--~~~~f~~P~~~~~~~~~~~ysf~~g------~v~fi~Lds~~~~---------------~~ 229 (407)
||+..+ ......+.. +..+|.+| ..||+|+++ +++||+|||.... ..
T Consensus 80 HD~~~~--~~~~~~~~~~~~~~~~~~~--------~~~y~~~~~~~~~~~~~~~i~LDt~~~~~~~~~~~~~~~~~~~~~ 149 (277)
T cd07378 80 HDYSGN--VSAQIDYTKRPNSPRWTMP--------AYYYRVSFPFPSSDTTVEFIMIDTVPLCGNSDDIASPYGPPNGKL 149 (277)
T ss_pred cccCCC--chheeehhccCCCCCccCc--------chheEEEeecCCCCCEEEEEEEeChhHcCccccccccccCcchhh
Confidence 998532 111111111 13334444 468999988 7999999996421 13
Q ss_pred ChHHHHHHHHhccccCCCCCCeEEEEeeccccccCCCCCCCChhHHHHHHHHHHhCCCcEEEecccccccccccccccee
Q 040421 230 YTPQYKWLEKEFPKVNRSETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAYERSERMSNIAY 309 (407)
Q Consensus 230 ~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~~~~~~ 309 (407)
..+|++||+++|+++ ..+|+||++|||+++..... .....++.|.+++++++|+++|+||.|.+++..+
T Consensus 150 ~~~Q~~wL~~~L~~~---~~~~~iv~~H~P~~~~~~~~--~~~~~~~~l~~l~~~~~v~~vl~GH~H~~~~~~~------ 218 (277)
T cd07378 150 AEEQLAWLEKTLAAS---TADWKIVVGHHPIYSSGEHG--PTSCLVDRLLPLLKKYKVDAYLSGHDHNLQHIKD------ 218 (277)
T ss_pred HHHHHHHHHHHHHhc---CCCeEEEEeCccceeCCCCC--CcHHHHHHHHHHHHHcCCCEEEeCCcccceeeec------
Confidence 578999999999985 33799999999999765422 2256788999999999999999999999998863
Q ss_pred eccCCcccccCCCCCceEEEeCCCCCCCCCcccCCCCCCCccceeeCcceEEEEEEeeccEEEEEEEEcCCC
Q 040421 310 NVTNALCSPVSDQSAPVYITIGDGGNQEGLAKEMTEPQPRYSAYREASFGHGILDVKNRTHAYFGWHRNQDD 381 (407)
Q Consensus 310 ~~~~g~~~~~~~~~g~~~iv~G~gG~~~~~~~~~~~~~p~~~~~~~~~~Gf~~l~v~~~~~~~~~~~~~~~g 381 (407)
...++.||++|+||...+.........|.|..++...+||++|+|.+ ..++++|+. .||
T Consensus 219 -----------~~~~~~~i~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~Gy~~i~v~~-~~l~~~~~~-~~g 277 (277)
T cd07378 219 -----------DGSGTSFVVSGAGSKARPSVKHIDKVPQFFSGFTSSGGGFAYLELTK-EELTVRFYD-ADG 277 (277)
T ss_pred -----------CCCCcEEEEeCCCcccCCCCCccCcccccccccccCCCCEEEEEEec-CEEEEEEEC-CCC
Confidence 13578999999998876532221212234677777889999999964 569999974 565
|
Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma |
| >KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-32 Score=238.42 Aligned_cols=262 Identities=17% Similarity=0.273 Sum_probs=178.3
Q ss_pred CCCCcEEEEEecCCCCCCchh-----hHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhH-HHHHHhhhhccCCeEE
Q 040421 95 PDVPYTFGLIGDLGQTYYSNR-----TLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDT-WGRFIERNAAYQPWIW 168 (407)
Q Consensus 95 ~~~~~~f~~~gD~~~~~~~~~-----~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~-~~~~~~~~~~~~P~~~ 168 (407)
++..++|+++||+|......+ .+.++.+. .+.||||.+||++|.+|..+..+..++. |.+.+..-..+.|||.
T Consensus 40 ~dgslsflvvGDwGr~g~~nqs~va~qmg~ige~-l~idfvlS~GDNfYd~G~~~~~Dp~Fq~sF~nIYT~pSLQkpWy~ 118 (336)
T KOG2679|consen 40 SDGSLSFLVVGDWGRRGSFNQSQVALQMGEIGEK-LDIDFVLSTGDNFYDTGLTSENDPRFQDSFENIYTAPSLQKPWYS 118 (336)
T ss_pred CCCceEEEEEcccccCCchhHHHHHHHHHhHHHh-ccceEEEecCCcccccCCCCCCChhHHhhhhhcccCcccccchhh
Confidence 468999999999996543221 22334444 4899999999999999987666665544 4444433334579999
Q ss_pred ccCCCccccCCCCCCccc--ccccccccccCCCCCCCCCCeEEE------EecCcEEEEEEeccc-------cCC-----
Q 040421 169 TVGNHEIDFAPQLGEAIP--FKPFANRFHLPYRAPYSTAPFWYS------IRRASAHIIVMSCYS-------AFG----- 228 (407)
Q Consensus 169 ~~GNHD~~~~~~~~~~~~--~~~~~~~f~~P~~~~~~~~~~~ys------f~~g~v~fi~Lds~~-------~~~----- 228 (407)
++||||+..+ ..++.. +.....+|..|.. ||. +..-++.++++|+.. ++.
T Consensus 119 vlGNHDyrGn--V~AQls~~l~~~d~RW~c~rs--------f~~~ae~ve~f~v~~~~f~~d~~~~~~~~~ydw~~v~PR 188 (336)
T KOG2679|consen 119 VLGNHDYRGN--VEAQLSPVLRKIDKRWICPRS--------FYVDAEIVEMFFVDTTPFMDDTFTLCTDDVYDWRGVLPR 188 (336)
T ss_pred hccCccccCc--hhhhhhHHHHhhccceecccH--------HhhcceeeeeeccccccchhhheecccccccccccCChH
Confidence 9999999743 223322 3444566665532 111 111233444444321 111
Q ss_pred --CChHHHHHHHHhccccCCCCCCeEEEEeeccccccCCCCCCCChhHHHHHHHHHHhCCCcEEEecccccccccccccc
Q 040421 229 --KYTPQYKWLEKEFPKVNRSETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAYERSERMSN 306 (407)
Q Consensus 229 --~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~~~ 306 (407)
....++.||+..|++ +.++|+||++|||+.+.+.+ +...+++++|.|||++++||++++||+|+.|+....
T Consensus 189 ~~~~~~~l~~le~~L~~---S~a~wkiVvGHh~i~S~~~H--G~T~eL~~~LlPiL~~n~VdlY~nGHDHcLQhis~~-- 261 (336)
T KOG2679|consen 189 VKYLRALLSWLEVALKA---SRAKWKIVVGHHPIKSAGHH--GPTKELEKQLLPILEANGVDLYINGHDHCLQHISSP-- 261 (336)
T ss_pred HHHHHHHHHHHHHHHHH---hhcceEEEecccceehhhcc--CChHHHHHHHHHHHHhcCCcEEEecchhhhhhccCC--
Confidence 125789999999998 67889999999999988765 456789999999999999999999999999998621
Q ss_pred ceeeccCCcccccCCCCCceEEEeCCCCCCCCCcccCC-CCCCCccceeeCcceEEEEEEeeccEEEEEEEEcCCCceee
Q 040421 307 IAYNVTNALCSPVSDQSAPVYITIGDGGNQEGLAKEMT-EPQPRYSAYREASFGHGILDVKNRTHAYFGWHRNQDDYAVE 385 (407)
Q Consensus 307 ~~~~~~~g~~~~~~~~~g~~~iv~G~gG~~~~~~~~~~-~~~p~~~~~~~~~~Gf~~l~v~~~~~~~~~~~~~~~g~~~~ 385 (407)
..++-|+++|+|...-.. .... ...|+...|...+-||..+++ ....+++.|++ .-|+++
T Consensus 262 ---------------e~~iqf~tSGagSkaw~g-~~~~~~~~p~~lkF~YdgqGfmsv~i-s~~e~~vvfyD-~~G~~L- 322 (336)
T KOG2679|consen 262 ---------------ESGIQFVTSGAGSKAWRG-TDHNPEVNPKELKFYYDGQGFMSVEI-SHSEARVVFYD-VSGKVL- 322 (336)
T ss_pred ---------------CCCeeEEeeCCcccccCC-CccCCccChhheEEeeCCCceEEEEE-ecceeEEEEEe-ccCceE-
Confidence 355667777766554221 1111 224555667667779999999 45678898986 579986
Q ss_pred eeeEEEEec
Q 040421 386 ADSVWLHNR 394 (407)
Q Consensus 386 ~D~~~i~~~ 394 (407)
.++...|+
T Consensus 323 -hk~~t~kr 330 (336)
T KOG2679|consen 323 -HKWSTSKR 330 (336)
T ss_pred -EEeecccc
Confidence 66665554
|
|
| >cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.96 E-value=8e-29 Score=229.58 Aligned_cols=231 Identities=18% Similarity=0.200 Sum_probs=157.9
Q ss_pred CCcEEEEEecCCCCCC--c---------------hhhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhh
Q 040421 97 VPYTFGLIGDLGQTYY--S---------------NRTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIER 159 (407)
Q Consensus 97 ~~~~f~~~gD~~~~~~--~---------------~~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~ 159 (407)
++++|+++||+|.+.. . ...++.+.+...+|||||++||+++..........+|+.+.+.++.
T Consensus 3 ~~~~f~~~sD~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~~~~~~~~~~~~~~~~~~~~~~ 82 (262)
T cd07395 3 GPFYFIQGADPQLGLIKKNLEGGGDEWDEEIKLTEQAVQAINKLNPKPKFVVVCGDLVNAMPGDELRERQVSDLKDVLSL 82 (262)
T ss_pred CCEEEEEecCCccchhhccccCchhhhhhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCCCCcchhhHHHHHHHHHHHHhh
Confidence 5899999999998731 1 1112223332238999999999997643211112346666777776
Q ss_pred hhccCCeEEccCCCccccCCCCCCcccccccccccccCCCCCCCCCCeEEEEecCcEEEEEEeccccC------CCChHH
Q 040421 160 NAAYQPWIWTVGNHEIDFAPQLGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRRASAHIIVMSCYSAF------GKYTPQ 233 (407)
Q Consensus 160 ~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ysf~~g~v~fi~Lds~~~~------~~~~~Q 233 (407)
+...+|+++++||||+...+.. ..+..|...| ++.+|+|++++++||+|||.... ....+|
T Consensus 83 ~~~~vp~~~i~GNHD~~~~~~~---~~~~~f~~~~----------g~~~y~~~~~~~~~i~lds~~~~~~~~~~~~~~~q 149 (262)
T cd07395 83 LDPDIPLVCVCGNHDVGNTPTE---ESIKDYRDVF----------GDDYFSFWVGGVFFIVLNSQLFFDPSEVPELAQAQ 149 (262)
T ss_pred ccCCCcEEEeCCCCCCCCCCCh---hHHHHHHHHh----------CCcceEEEECCEEEEEeccccccCccccccchHHH
Confidence 6667899999999998532111 1112222222 23589999999999999995421 124789
Q ss_pred HHHHHHhccccCCCCCCeEEEEeeccccccCCCCC----CCChhHHHHHHHHHHhCCCcEEEecccccccccccccccee
Q 040421 234 YKWLEKEFPKVNRSETPWLIVLMHCPLYNSYVHHY----MEGEPMRVLYEPWFVEYKVDVVFAAHVHAYERSERMSNIAY 309 (407)
Q Consensus 234 ~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~----~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~~~~~~ 309 (407)
++||+++|+++.+.+.+++||++|+|++....... ......++.|.++|++++|+++||||+|.+.+..
T Consensus 150 l~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~v~~GH~H~~~~~~------- 222 (262)
T cd07395 150 DVWLEEQLEIAKESDCKHVIVFQHIPWFLEDPDEEDSYFNIPKSVRKPLLDKFKKAGVKAVFSGHYHRNAGGR------- 222 (262)
T ss_pred HHHHHHHHHHHHhccCCcEEEEECcCCccCCCCCCcccCCcCHHHHHHHHHHHHhcCceEEEECccccCCceE-------
Confidence 99999999986434567899999999986443211 1234567899999999999999999999887643
Q ss_pred eccCCcccccCCCCCceEEEeCCCCCCCCCcccCCCCCCCccceeeCcceEEEEEEeeccEEEEEEE
Q 040421 310 NVTNALCSPVSDQSAPVYITIGDGGNQEGLAKEMTEPQPRYSAYREASFGHGILDVKNRTHAYFGWH 376 (407)
Q Consensus 310 ~~~~g~~~~~~~~~g~~~iv~G~gG~~~~~~~~~~~~~p~~~~~~~~~~Gf~~l~v~~~~~~~~~~~ 376 (407)
-+++.|++++++|.... ...+||..++++.++ ++++|+
T Consensus 223 ------------~~g~~~~~~~~~~~~~~----------------~~~~g~~~~~v~~~~-~~~~~~ 260 (262)
T cd07395 223 ------------YGGLEMVVTSAIGAQLG----------------NDKSGLRIVKVTEDK-IVHEYY 260 (262)
T ss_pred ------------ECCEEEEEcCceecccC----------------CCCCCcEEEEECCCc-eeeeee
Confidence 14567888887775321 123799999996554 788876
|
CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th |
| >PF09423 PhoD: PhoD-like phosphatase; InterPro: IPR018946 This entry contains a number of putative proteins as well as Alkaline phosphatase D which catalyses the reaction: |
Back alignment and domain information |
|---|
Probab=99.95 E-value=2.9e-26 Score=228.24 Aligned_cols=288 Identities=19% Similarity=0.233 Sum_probs=146.5
Q ss_pred eeccCCCCCcEEEEEEcCCC----------CCCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEE
Q 040421 3 ITQGDHEGKGVIVSWVTPDE----------PGSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKY 72 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~----------~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 72 (407)
++.|++++++ +|.|..-.. +....+++++.+........+.+.. .....+++++.|+||+|+|.|
T Consensus 3 vasGdp~~~s-vilWtR~~~~~~~~~~~~~~~~V~~~va~d~~~~~~~~~~~~~~----~~~~d~t~~v~v~gL~p~t~Y 77 (453)
T PF09423_consen 3 VASGDPTPDS-VILWTRVTPPAAAGGMPKAPVPVRWEVATDPEFSNVVRSGTVTT----TAERDFTVKVDVTGLQPGTRY 77 (453)
T ss_dssp EEEE---SS--EEEEEE--SBGGTB---SS-EEEEEEEESSTTSSSEEEEEEEEE-----GGGTTEEEEEE-S--TT-EE
T ss_pred ccccCCCCCE-EEEEEEecCcccCCCCCCCcEEEEEEEECCCCccceEEecceec----ccCCCeEeecccCCCCCCceE
Confidence 5678876555 555776544 2233444555544333333344322 235789999999999999999
Q ss_pred EEEeCcC---CceeeEEEEcCCCCCCCCCcEEEEEecCCCCCCchhhHHHhhhCCCCCceEEEcCCccccCCC---CC--
Q 040421 73 YYEVGVG---NATRQFSFTTPPGVGPDVPYTFGLIGDLGQTYYSNRTLTHYELNPIKGQTVLFVGDLSYADDY---PF-- 144 (407)
Q Consensus 73 ~Y~v~~~---~~s~~~~F~T~p~~~~~~~~~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~y~~~~---~~-- 144 (407)
+||+... ..++.++|+|+|.. ....+||++++|.+.......++..+.+. .+|||+||+||++|.+.. ..
T Consensus 78 ~Y~~~~~~~~~~s~~g~~rT~p~~-~~~~~r~a~~SC~~~~~~~~~~~~~~a~~-~~~D~~l~lGD~IY~d~~~~~~~~~ 155 (453)
T PF09423_consen 78 YYRFVVDGGGQTSPVGRFRTAPDG-DPDPFRFAFGSCQNYEDGYFPAYRRIAER-DDPDFVLHLGDQIYEDGGGGYGNLS 155 (453)
T ss_dssp EEEEEE--TTEE---EEEE--TT------EEEEEE----CCC---HHHHHHTT--S--SEEEE-S-SS----TTSS--TT
T ss_pred EEEEEEecCCCCCCceEEEcCCCC-CCCceEEEEECCCCcccChHHHHHhhhcc-CCCcEEEEeCCeeeccCCccccccc
Confidence 9999883 56789999999654 34579999999998765556777888774 389999999999999862 00
Q ss_pred -----------CCchhhhHHH---------HHHhhhhccCCeEEccCCCccccCCCCCCc-------ccc--------cc
Q 040421 145 -----------HDNNRWDTWG---------RFIERNAAYQPWIWTVGNHEIDFAPQLGEA-------IPF--------KP 189 (407)
Q Consensus 145 -----------~~~~~~~~~~---------~~~~~~~~~~P~~~~~GNHD~~~~~~~~~~-------~~~--------~~ 189 (407)
......+.|. ..++.+.+.+|+++++.+||+..+...... ..+ .+
T Consensus 156 ~~~~~r~~~p~~~~~~l~~yR~~y~~~~~~p~l~~~~~~~P~~~iwDDHdi~nn~~~~~~~~~~~~~~~~~~~~~~a~~a 235 (453)
T PF09423_consen 156 RRPIGRAPEPAHEAETLDDYRRRYRQYRSDPDLRRLHANVPWIMIWDDHDIGNNWWGDGAENHQDTSGDFQDRRRAAYQA 235 (453)
T ss_dssp ---S-----SSSS--SHHHHHHHHHHHHT-HHHHHHHHHSEEEE---STTTSTT-BTTB-STT---HHHHHHHHHHHHHH
T ss_pred ccccccccccccccccHHHHHHHHHHHcCCHHHHHHhhcccEEEEccCceecccccCCccccccccccchHHHHHHHHHH
Confidence 0001111221 234456678999999999999533221111 001 11
Q ss_pred cccccccCCCC---CCCCCCeEEEEecCc-EEEEEEecccc-----C----------------CCChHHHHHHHHhcccc
Q 040421 190 FANRFHLPYRA---PYSTAPFWYSIRRAS-AHIIVMSCYSA-----F----------------GKYTPQYKWLEKEFPKV 244 (407)
Q Consensus 190 ~~~~f~~P~~~---~~~~~~~~ysf~~g~-v~fi~Lds~~~-----~----------------~~~~~Q~~WL~~~L~~~ 244 (407)
|.+. +|... .......|++|.+|+ +.|++||+... . -.+.+|++||++.|++
T Consensus 236 y~e~--~p~r~~~~~~~~~~~y~~~~~G~~~~~~~LD~R~~R~~~~~~~~~~~~~~~~~~~~~mLG~~Q~~wL~~~L~~- 312 (453)
T PF09423_consen 236 YFEY--QPVRNPDPPGDQGRIYRSFRYGDLVEFFMLDTRSYRSPPPCDGPGDTCPAADDPSRTMLGEEQWDWLEDWLAS- 312 (453)
T ss_dssp HHHH--S---GGG-BTTB----EEEEETTTEEEEE--SSSS----CCCSSEE--HHHH-TT--SS-HHHHHHHHHHHHH-
T ss_pred HHhh--cCccCCCccCCCCceEEEEecCCceeEEEEechhccccccccccccccccccCCccCcCCHHHHHHHHHHHhc-
Confidence 2221 23221 112345689999999 99999998421 0 1368999999999998
Q ss_pred CCCCCCeEEEEeeccccccCCC-----------CCCCChhHHHHHHHHHHhCCCc--EEEecccccccccc
Q 040421 245 NRSETPWLIVLMHCPLYNSYVH-----------HYMEGEPMRVLYEPWFVEYKVD--VVFAAHVHAYERSE 302 (407)
Q Consensus 245 ~~~~~~~~iv~~H~P~~~~~~~-----------~~~~~~~~~~~l~~l~~~~~vd--lvl~GH~H~y~r~~ 302 (407)
+.++|+||+.-.|+...... .+..-...|++|..+|.+.++. ++|+|+.|...-..
T Consensus 313 --s~a~~kvi~s~v~~~~~~~~~~~~~~~~~~d~W~g~~~er~~Ll~~l~~~~~~~vV~LSGDvH~~~~~~ 381 (453)
T PF09423_consen 313 --SQATWKVIGSSVPFSPLNFPDAAEGLPFNMDSWDGYPAERQRLLDFLRESGIRNVVFLSGDVHASAASR 381 (453)
T ss_dssp ----SSEEEEE-SS--S---SS-SS-S--EETTSGGGSHHHHHHHHHHHHHTT---EEEEE-SSSSEEEEE
T ss_pred --CCCcEEEEEeCCceecccccccccccccCCCchhhCHHHHHHHHHHHHhhCCCCEEEEecCcchheeee
Confidence 55889999998887543221 1222345788999999988775 89999999876554
|
|
| >cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.6e-25 Score=202.51 Aligned_cols=219 Identities=16% Similarity=0.138 Sum_probs=146.3
Q ss_pred EEEEEecCCCCCCc---------hhhHH----HhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccCCe
Q 040421 100 TFGLIGDLGQTYYS---------NRTLT----HYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPW 166 (407)
Q Consensus 100 ~f~~~gD~~~~~~~---------~~~l~----~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 166 (407)
||++++|+|.+... ...++ .+.+...+||+||++||+++... ...|+.+.+.++.+ .+|+
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~~~-----~~~~~~~~~~l~~~--~~p~ 73 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGVDTAASLEAVLAHINALHPRPDLVLVTGDLTDDGS-----PESYERLRELLAAL--PIPV 73 (240)
T ss_pred CEEEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCCCC-----HHHHHHHHHHHhhc--CCCE
Confidence 69999999987531 12233 33333238999999999996522 34566666776665 6899
Q ss_pred EEccCCCccccCCCCCCcccccccccccccCCCCCCCCCCeEEEEecCcEEEEEEeccccC----CCChHHHHHHHHhcc
Q 040421 167 IWTVGNHEIDFAPQLGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRRASAHIIVMSCYSAF----GKYTPQYKWLEKEFP 242 (407)
Q Consensus 167 ~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ysf~~g~v~fi~Lds~~~~----~~~~~Q~~WL~~~L~ 242 (407)
++++||||... .+...|..... .....+|+|+.++++||+||+.... ....+|++||++.|+
T Consensus 74 ~~v~GNHD~~~-----------~~~~~~~~~~~---~~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~ql~wL~~~L~ 139 (240)
T cd07402 74 YLLPGNHDDRA-----------AMRAVFPELPP---APGFVQYVVDLGGWRLILLDSSVPGQHGGELCAAQLDWLEAALA 139 (240)
T ss_pred EEeCCCCCCHH-----------HHHHhhccccc---cccccceeEecCCEEEEEEeCCCCCCcCCEECHHHHHHHHHHHH
Confidence 99999999831 11112211100 1234678999999999999986432 135789999999999
Q ss_pred ccCCCCCCeEEEEeeccccccCCCCC-CCChhHHHHHHHHHHhC-CCcEEEeccccccccccccccceeeccCCcccccC
Q 040421 243 KVNRSETPWLIVLMHCPLYNSYVHHY-MEGEPMRVLYEPWFVEY-KVDVVFAAHVHAYERSERMSNIAYNVTNALCSPVS 320 (407)
Q Consensus 243 ~~~~~~~~~~iv~~H~P~~~~~~~~~-~~~~~~~~~l~~l~~~~-~vdlvl~GH~H~y~r~~~~~~~~~~~~~g~~~~~~ 320 (407)
++. .+++|+++|+|++....... ......++.+.+++.++ +|+++|+||.|......
T Consensus 140 ~~~---~~~~il~~H~pp~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~v~~GH~H~~~~~~------------------ 198 (240)
T cd07402 140 EAP---DKPTLVFLHHPPFPVGIAWMDAIGLRNAEALAAVLARHPNVRAILCGHVHRPIDGS------------------ 198 (240)
T ss_pred hCC---CCCEEEEECCCCccCCchhhhhhhCCCHHHHHHHHhcCCCeeEEEECCcCchHHeE------------------
Confidence 852 45789999999976532110 01112367889999999 99999999999976553
Q ss_pred CCCCceEEEeCCCCCCCCCcccCCCCCCCccceeeCcceEEEEEEeec
Q 040421 321 DQSAPVYITIGDGGNQEGLAKEMTEPQPRYSAYREASFGHGILDVKNR 368 (407)
Q Consensus 321 ~~~g~~~iv~G~gG~~~~~~~~~~~~~p~~~~~~~~~~Gf~~l~v~~~ 368 (407)
.+|+.++++|+.|..... .+...+..+..+||..+.+.++
T Consensus 199 -~~g~~~~~~gs~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~ 238 (240)
T cd07402 199 -WGGIPLLTAPSTCHQFAP-------DLDDFALDALAPGYRALSLHED 238 (240)
T ss_pred -ECCEEEEEcCcceeeecC-------CCCcccccccCCCCcEEEEecC
Confidence 256778899988775321 2223333344578888877543
|
GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa |
| >cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.92 E-value=3e-24 Score=199.05 Aligned_cols=197 Identities=17% Similarity=0.240 Sum_probs=130.6
Q ss_pred cEEEEEecCCCCCCc----------hhh----HHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccC
Q 040421 99 YTFGLIGDLGQTYYS----------NRT----LTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQ 164 (407)
Q Consensus 99 ~~f~~~gD~~~~~~~----------~~~----l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (407)
|||++++|+|..... ... ++.+.+. +||+||++||+++.... .....|+.+.+.++.+ .+
T Consensus 1 ~r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~~i~~~--~~d~vv~~GDlv~~~~~--~~~~~~~~~~~~l~~l--~~ 74 (267)
T cd07396 1 FRFGIIADIQYADEDDTRPRYYRNSLEKLEEAVEEWNRE--SLDFVVQLGDIIDGDNA--RAEEALDAVLAILDRL--KG 74 (267)
T ss_pred CeEEEEeccccccCCCcccchHHHhHHHHHHHHHHHHcC--CCCEEEECCCeecCCCc--hHHHHHHHHHHHHHhc--CC
Confidence 799999999955321 122 3333333 79999999999964321 1124455555555554 48
Q ss_pred CeEEccCCCccccCCCCCCcccccccccccccCCCCCCCCCCeEEEEecCcEEEEEEecccc------------------
Q 040421 165 PWIWTVGNHEIDFAPQLGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRRASAHIIVMSCYSA------------------ 226 (407)
Q Consensus 165 P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ysf~~g~v~fi~Lds~~~------------------ 226 (407)
|+++++||||..... ..+.. .... ...+..||+|++++++||+||+...
T Consensus 75 p~~~v~GNHD~~~~~--------~~~~~-~~~~----~~~~~~yysf~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~ 141 (267)
T cd07396 75 PVHHVLGNHDLYNPS--------REYLL-LYTL----LGLGAPYYSFSPGGIRFIVLDGYDISALGRPEDTPKAENADDN 141 (267)
T ss_pred CEEEecCcccccccc--------Hhhhh-cccc----cCCCCceEEEecCCcEEEEEeCCccccccCCCCChhhhhHHHh
Confidence 999999999985211 00100 0000 1134569999999999999999531
Q ss_pred --------------C--CCChHHHHHHHHhccccCCCCCCeEEEEeeccccccCCCCCCCChhHHHHHHHHHHhC-CCcE
Q 040421 227 --------------F--GKYTPQYKWLEKEFPKVNRSETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEY-KVDV 289 (407)
Q Consensus 227 --------------~--~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~-~vdl 289 (407)
+ ....+|++||+++|+++.. +..++||++|+|++...... ......++.+.++++++ +|++
T Consensus 142 ~~~~~~~~~~~~~~~~G~l~~~Ql~WL~~~L~~~~~-~~~~viV~~Hhp~~~~~~~~-~~~~~~~~~~~~ll~~~~~V~~ 219 (267)
T cd07396 142 SNLGLYLSEPRFVDWNGGIGEEQLQWLRNELQEADA-NGEKVIIFSHFPLHPESTSP-HGLLWNHEEVLSILRAYGCVKA 219 (267)
T ss_pred chhhhhccCccceeccCcCCHHHHHHHHHHHHHHHh-cCCeEEEEEeccCCCCCCCc-cccccCHHHHHHHHHhCCCEEE
Confidence 0 1247899999999997532 33578999999987654311 11112256788999996 8999
Q ss_pred EEeccccccccccccccceeeccCCcccccCCCCCceEEEeCCCCC
Q 040421 290 VFAAHVHAYERSERMSNIAYNVTNALCSPVSDQSAPVYITIGDGGN 335 (407)
Q Consensus 290 vl~GH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~g~~~iv~G~gG~ 335 (407)
+|+||+|.+.... .+|+.|+++|+-..
T Consensus 220 v~~GH~H~~~~~~-------------------~~gi~~~~~~a~~~ 246 (267)
T cd07396 220 CISGHDHEGGYAQ-------------------RHGIHFLTLEGMVE 246 (267)
T ss_pred EEcCCcCCCCccc-------------------cCCeeEEEechhhc
Confidence 9999999987543 36778888887554
|
Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.4e-22 Score=187.25 Aligned_cols=238 Identities=13% Similarity=0.133 Sum_probs=143.4
Q ss_pred EEcCCCCCCCCCcEEEEEecCCCCCC---------chh----hHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHH
Q 040421 87 FTTPPGVGPDVPYTFGLIGDLGQTYY---------SNR----TLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTW 153 (407)
Q Consensus 87 F~T~p~~~~~~~~~f~~~gD~~~~~~---------~~~----~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~ 153 (407)
.+|.+.. ..++||+.++|+|.... ... +++.+.+...+|||||++||++... ..+.++.+
T Consensus 5 ~~~~~~~--~~~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~~~-----~~~~~~~~ 77 (275)
T PRK11148 5 LTLPLAG--EARVRILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQHEFDLIVATGDLAQDH-----SSEAYQHF 77 (275)
T ss_pred cccccCC--CCCEEEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhCCCCCEEEECCCCCCCC-----CHHHHHHH
Confidence 4555543 36899999999996321 112 2333433323799999999999632 13455666
Q ss_pred HHHHhhhhccCCeEEccCCCccccCCCCCCcccccccccccccCCCCCCCCCCeEEEEecCcEEEEEEeccccC---C-C
Q 040421 154 GRFIERNAAYQPWIWTVGNHEIDFAPQLGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRRASAHIIVMSCYSAF---G-K 229 (407)
Q Consensus 154 ~~~~~~~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ysf~~g~v~fi~Lds~~~~---~-~ 229 (407)
.+.++.+ .+|+++++||||... .+...+. ..+ ....++.+..++++||+|||.... + .
T Consensus 78 ~~~l~~l--~~Pv~~v~GNHD~~~-----------~~~~~~~--~~~---~~~~~~~~~~~~~~~i~Lds~~~g~~~G~l 139 (275)
T PRK11148 78 AEGIAPL--RKPCVWLPGNHDFQP-----------AMYSALQ--DAG---ISPAKHVLIGEHWQILLLDSQVFGVPHGEL 139 (275)
T ss_pred HHHHhhc--CCcEEEeCCCCCChH-----------HHHHHHh--hcC---CCccceEEecCCEEEEEecCCCCCCcCCEe
Confidence 6666665 479999999999831 1111111 000 111233344456999999995421 1 3
Q ss_pred ChHHHHHHHHhccccCCCCCCeEEEEeeccccccCCCC-CCCChhHHHHHHHHHHhC-CCcEEEeccccccccccccccc
Q 040421 230 YTPQYKWLEKEFPKVNRSETPWLIVLMHCPLYNSYVHH-YMEGEPMRVLYEPWFVEY-KVDVVFAAHVHAYERSERMSNI 307 (407)
Q Consensus 230 ~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~-~~~~~~~~~~l~~l~~~~-~vdlvl~GH~H~y~r~~~~~~~ 307 (407)
..+|++||+++|+++ +.+..||++|||++..+... ......-.+.|.++++++ +|+++|+||+|......
T Consensus 140 ~~~ql~wL~~~L~~~---~~~~~vv~~hH~P~~~~~~~~d~~~l~n~~~l~~ll~~~~~v~~vl~GH~H~~~~~~----- 211 (275)
T PRK11148 140 SEYQLEWLERKLADA---PERHTLVLLHHHPLPAGCAWLDQHSLRNAHELAEVLAKFPNVKAILCGHIHQELDLD----- 211 (275)
T ss_pred CHHHHHHHHHHHhhC---CCCCeEEEEcCCCCCCCcchhhccCCCCHHHHHHHHhcCCCceEEEecccChHHhce-----
Confidence 579999999999874 22356666776554433211 011112346889999998 89999999999854332
Q ss_pred eeeccCCcccccCCCCCceEEEeCCCCCCCCCcccCCCCCCCccceeeCcceEEEEEEeeccEEEEEEEEc
Q 040421 308 AYNVTNALCSPVSDQSAPVYITIGDGGNQEGLAKEMTEPQPRYSAYREASFGHGILDVKNRTHAYFGWHRN 378 (407)
Q Consensus 308 ~~~~~~g~~~~~~~~~g~~~iv~G~gG~~~~~~~~~~~~~p~~~~~~~~~~Gf~~l~v~~~~~~~~~~~~~ 378 (407)
.+|+.++++++.+..... ..+.+ ......+||..+++.+++.+..+..+-
T Consensus 212 --------------~~gi~~~~~ps~~~q~~~------~~~~~-~~~~~~~g~~~~~l~~~g~~~~~~~~~ 261 (275)
T PRK11148 212 --------------WNGRRLLATPSTCVQFKP------HCTNF-TLDTVAPGWRELELHADGSLETEVHRL 261 (275)
T ss_pred --------------ECCEEEEEcCCCcCCcCC------CCCcc-ccccCCCcEEEEEEcCCCcEEEEEEEc
Confidence 256667777766643211 01111 112234699999996665566555543
|
|
| >COG3540 PhoD Phosphodiesterase/alkaline phosphatase D [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.3e-22 Score=189.12 Aligned_cols=283 Identities=18% Similarity=0.226 Sum_probs=187.7
Q ss_pred eeccCCCCCcEEEEEEcCC-------CCCCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEE
Q 040421 3 ITQGDHEGKGVIVSWVTPD-------EPGSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYE 75 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~-------~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~ 75 (407)
++.|++. ..-.|.|..-+ .+....++++++++..+.+..++... .....+.+++.+.||+|++.|+||
T Consensus 43 VaSGDp~-~~svviWTRl~P~p~~~g~~v~V~wEvs~~~~f~~ivr~gt~~a----~p~~dhtv~v~~~gL~P~~~yfYR 117 (522)
T COG3540 43 VASGDPT-ATSVVIWTRLDPEPLNGGRPVPVIWEVSTDENFSNIVRKGTVIA----SPELDHTVHVDLRGLSPDQDYFYR 117 (522)
T ss_pred cccCCCC-CCeEEEEEccCCccccCCCCcceEEEecCCccHHHHHhcCCccC----CcccCceEEEeccCCCCCceEEEE
Confidence 4567765 45566787653 14457888888887554443343322 224678999999999999999999
Q ss_pred eCcC-CceeeEEEEcCCCCCCCCCcEEEEEecC---CCCCCchhhHHHhhhCCCCCceEEEcCCccccCCCCCCC-----
Q 040421 76 VGVG-NATRQFSFTTPPGVGPDVPYTFGLIGDL---GQTYYSNRTLTHYELNPIKGQTVLFVGDLSYADDYPFHD----- 146 (407)
Q Consensus 76 v~~~-~~s~~~~F~T~p~~~~~~~~~f~~~gD~---~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~----- 146 (407)
+..+ ..|+.++|+|+|..+ ..++|+.+||. +.+.+...+.+.|.+. +|||+||+||.+|+++.....
T Consensus 118 f~~~~~~spvGrtrTapa~~--~~i~~~~fa~ascQ~~~~gy~~aY~~ma~~--~~D~viH~GDyIYeyg~~~~~~~~~~ 193 (522)
T COG3540 118 FKAGDERSPVGRTRTAPAPG--RAIRFVWFADASCQGWEIGYMTAYKTMAKE--EPDFVIHLGDYIYEYGPIPDEVSLNS 193 (522)
T ss_pred EeeCCccccccccccCCCCC--CcchhhhhhhccccccccchhHHHHHHHhc--CCCEEEEcCCeeeccCCccccccccc
Confidence 9886 568999999999875 45666666555 4444444566667666 799999999999998853100
Q ss_pred -------------chhhhHHH---------HHHhhhhccCCeEEccCCCccccCCCCCCcc--c--------------cc
Q 040421 147 -------------NNRWDTWG---------RFIERNAAYQPWIWTVGNHEIDFAPQLGEAI--P--------------FK 188 (407)
Q Consensus 147 -------------~~~~~~~~---------~~~~~~~~~~P~~~~~GNHD~~~~~~~~~~~--~--------------~~ 188 (407)
-...+.|. ..++...+..||++.+.+||..++...+..+ + +.
T Consensus 194 ~~~~~~~~~~~~ei~TLddYR~rya~y~~D~nLqaahA~~Pwi~~WDDHEv~NN~~~~~~~nD~~~~~k~~~~r~a~A~q 273 (522)
T COG3540 194 WKNVVVTQHKSKEIETLDDYRGRYAYYKTDENLQAAHAAFPWIVQWDDHEVANNWSNSIDENDSRYDEKDFVLRAAAARQ 273 (522)
T ss_pred ccccccCCCCCcceeeHHHHhhHHhhhcccHHHHHhhccCCEEEEeccccccccccccccccCCCCChHHHHHHHHHHHH
Confidence 01112222 2234455679999999999996432211111 1 11
Q ss_pred ccccccccCCCCCCC--CCCeEEEEecCc-EEEEEEeccccC----------------------CCChHHHHHHHHhccc
Q 040421 189 PFANRFHLPYRAPYS--TAPFWYSIRRAS-AHIIVMSCYSAF----------------------GKYTPQYKWLEKEFPK 243 (407)
Q Consensus 189 ~~~~~f~~P~~~~~~--~~~~~ysf~~g~-v~fi~Lds~~~~----------------------~~~~~Q~~WL~~~L~~ 243 (407)
+|.+ .||...... ....|-+|.||+ +.|.+||+...- -.+..|.+||+..|.+
T Consensus 274 AyyE--~mPiR~~~~p~~~~lYR~~tyG~La~~~~LDtR~YR~dqp~~dg~~~~~q~~~~~~~~mlG~~QeqWLk~~L~~ 351 (522)
T COG3540 274 AYYE--HMPIRYSSLPTDGRLYRSFTYGPLADLFVLDTRSYRTDQPCGDGNPPNCQAVAGSAATMLGEQQEQWLKRGLGA 351 (522)
T ss_pred HHHH--hCccccccCCccceeeeeeccccccceeeeehhhhccccccCCCCcchhhhhhCccccchhhHHHHHHHhhhhh
Confidence 2322 356543321 246889999999 589999984210 1367899999999998
Q ss_pred cCCCCCCeEEEEeeccccc----cCC--CC-------CCCChhHHHHHHHHHHhCCCc--EEEeccccccc
Q 040421 244 VNRSETPWLIVLMHCPLYN----SYV--HH-------YMEGEPMRVLYEPWFVEYKVD--VVFAAHVHAYE 299 (407)
Q Consensus 244 ~~~~~~~~~iv~~H~P~~~----~~~--~~-------~~~~~~~~~~l~~l~~~~~vd--lvl~GH~H~y~ 299 (407)
+++.|+|+..-.|+-- ... .. +.....-|+.|..++...++. ++|+|++|...
T Consensus 352 ---SkatWnVia~q~~~~~~~~d~~~a~~~~~a~~D~wdGy~~~RerLl~fi~~~~~~N~V~LtgDvH~~w 419 (522)
T COG3540 352 ---SKATWNVIAQQMPLGLVVFDGSPATEGQEANADGWDGYPAGRERLLRFIADRKIRNTVVLTGDVHYSW 419 (522)
T ss_pred ---cchhhhhhhhhcceeEeecCCCccccCccccccCcCCCcccHHHHHHHHHhcCCCCcEEEechhHHHH
Confidence 7889999999988721 110 00 011123588999999998775 89999999643
|
|
| >cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.9e-22 Score=182.78 Aligned_cols=190 Identities=18% Similarity=0.240 Sum_probs=120.9
Q ss_pred EEEEecCCCCCCchhh-------HHHhhhCCCCCceEEEcCCccccCCCC----CCCchhhhHHHHHHhhhhc--cCCeE
Q 040421 101 FGLIGDLGQTYYSNRT-------LTHYELNPIKGQTVLFVGDLSYADDYP----FHDNNRWDTWGRFIERNAA--YQPWI 167 (407)
Q Consensus 101 f~~~gD~~~~~~~~~~-------l~~~~~~~~~~d~vl~~GD~~y~~~~~----~~~~~~~~~~~~~~~~~~~--~~P~~ 167 (407)
|+.++|+|.+....+. +...++. .+||+||++||++...... ......|+.|++.+..... ..|++
T Consensus 2 ~~~iSDlH~g~~~~~~~~~~~~~~~~~i~~-~~pd~i~~~GD~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 80 (256)
T cd07401 2 FVHISDIHVSSFHPPNRAQDETFCSNFIDV-IKPALVLATGDLTDNKTGNKLPSYQYQEEWQKYYNILKESSVINKEKWF 80 (256)
T ss_pred EEEecccccCCcCchhhhhHHHHHHHHHHh-hCCCEEEEccccccccccCCCcccccHHHHHHHHHHHHHhCCCCcceEE
Confidence 7889999987532111 1222333 3899999999999643211 1124567777777655432 58999
Q ss_pred EccCCCccccCCCCCCcccccccccccccCCCCCCCCCCeEEE--EecCcEEEEEEecccc----------CCCChHHHH
Q 040421 168 WTVGNHEIDFAPQLGEAIPFKPFANRFHLPYRAPYSTAPFWYS--IRRASAHIIVMSCYSA----------FGKYTPQYK 235 (407)
Q Consensus 168 ~~~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys--f~~g~v~fi~Lds~~~----------~~~~~~Q~~ 235 (407)
.++||||......... ....|.+...... ....+|. +..|+++||+|||... ....++|++
T Consensus 81 ~v~GNHD~~~~~~~~~--~~~~~~~y~~~~~-----~~~~~~~~~~~~~~~~~I~Ldt~~~~~~~~~~~~~g~l~~~ql~ 153 (256)
T cd07401 81 DIRGNHDLFNIPSLDS--ENNYYRKYSATGR-----DGSFSFSHTTRFGNYSFIGVDPTLFPGPKRPFNFFGSLDKKLLD 153 (256)
T ss_pred EeCCCCCcCCCCCccc--hhhHHHHhheecC-----CCccceEEEecCCCEEEEEEcCccCCCCCCCCceeccCCHHHHH
Confidence 9999999942211111 1111211111110 0112333 3358999999999632 123589999
Q ss_pred HHHHhccccCCCCCCeEEEEeeccccccCCCCCCCChhHHHHHHHHHHhCCCcEEEecccccccccccc
Q 040421 236 WLEKEFPKVNRSETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAYERSERM 304 (407)
Q Consensus 236 WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~ 304 (407)
||+++|+++ .+.+++||++|+|++...... ....+ .+.++|++++|+++||||.|.+++..|+
T Consensus 154 wL~~~L~~~--~~~~~~IV~~HhP~~~~~~~~---~~~~~-~~~~ll~~~~v~~vl~GH~H~~~~~~p~ 216 (256)
T cd07401 154 RLEKELEKS--TNSNYTIWFGHYPTSTIISPS---AKSSS-KFKDLLKKYNVTAYLCGHLHPLGGLEPV 216 (256)
T ss_pred HHHHHHHhc--ccCCeEEEEEcccchhccCCC---cchhH-HHHHHHHhcCCcEEEeCCccCCCcceee
Confidence 999999875 344689999999986533211 11222 3899999999999999999999997775
|
TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.85 E-value=6.3e-21 Score=170.72 Aligned_cols=151 Identities=19% Similarity=0.254 Sum_probs=108.7
Q ss_pred cEEEEEecCCCCCCc-h----hhHHHhhhCC--CCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhh-ccCCeEEcc
Q 040421 99 YTFGLIGDLGQTYYS-N----RTLTHYELNP--IKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNA-AYQPWIWTV 170 (407)
Q Consensus 99 ~~f~~~gD~~~~~~~-~----~~l~~~~~~~--~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~-~~~P~~~~~ 170 (407)
|||++++|+|..... . ..++.+++.. .+||+||++||+++... ...+|+.+.+.++.+. ..+|+++++
T Consensus 1 f~~~~~~D~q~~~~~~~~~~~~~~~~i~~~~~~~~~d~iv~~GDl~~~~~----~~~~~~~~~~~~~~l~~~~~p~~~~~ 76 (214)
T cd07399 1 FTLAVLPDTQYYTESYPEVFDAQTDWIVDNAEALNIAFVLHLGDIVDDGD----NDAEWEAADKAFARLDKAGIPYSVLA 76 (214)
T ss_pred CEEEEecCCCcCCcCCHHHHHHHHHHHHHHHHHcCCCEEEECCCccCCCC----CHHHHHHHHHHHHHHHHcCCcEEEEC
Confidence 699999999986432 1 1222232211 37999999999996432 1467888888888876 569999999
Q ss_pred CCCccccCCCCCCcccccccccccccCCCCCCCCCCeEEEEecCcEEEEEEeccccCCCChHHHHHHHHhccccCCCCCC
Q 040421 171 GNHEIDFAPQLGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRRASAHIIVMSCYSAFGKYTPQYKWLEKEFPKVNRSETP 250 (407)
Q Consensus 171 GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ysf~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~ 250 (407)
||||. ++.+|+ ....+|++||++.|++. +.+
T Consensus 77 GNHD~------------------------------------------~~~ld~----~~~~~ql~WL~~~L~~~---~~~ 107 (214)
T cd07399 77 GNHDL------------------------------------------VLALEF----GPRDEVLQWANEVLKKH---PDR 107 (214)
T ss_pred CCCcc------------------------------------------hhhCCC----CCCHHHHHHHHHHHHHC---CCC
Confidence 99993 222332 12479999999999974 335
Q ss_pred eEEEEeeccccccCCCCCCC-----ChhHHHHHHHHHHhC-CCcEEEecccccccccc
Q 040421 251 WLIVLMHCPLYNSYVHHYME-----GEPMRVLYEPWFVEY-KVDVVFAAHVHAYERSE 302 (407)
Q Consensus 251 ~~iv~~H~P~~~~~~~~~~~-----~~~~~~~l~~l~~~~-~vdlvl~GH~H~y~r~~ 302 (407)
++||++|||++......... ....++.|.++++++ +|+++|+||.|.+.+..
T Consensus 108 ~~iv~~H~p~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~V~~v~~GH~H~~~~~~ 165 (214)
T cd07399 108 PAILTTHAYLNCDDSRPDSIDYDSDVNDGQQIWDKLVKKNDNVFMVLSGHVHGAGRTT 165 (214)
T ss_pred CEEEEecccccCCCCcCcccccccccccHHHHHHHHHhCCCCEEEEEccccCCCceEE
Confidence 79999999998655322111 123456788999999 79999999999998775
|
YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for |
| >cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.7e-19 Score=170.06 Aligned_cols=195 Identities=19% Similarity=0.211 Sum_probs=123.0
Q ss_pred EEecCCCCCCc---hhhHHHhhhCCCCCceEEEcCCccccCCCCCCCch----hhhHHHHHHhhhhccCCeEEccCCCcc
Q 040421 103 LIGDLGQTYYS---NRTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNN----RWDTWGRFIERNAAYQPWIWTVGNHEI 175 (407)
Q Consensus 103 ~~gD~~~~~~~---~~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~----~~~~~~~~~~~~~~~~P~~~~~GNHD~ 175 (407)
-+|+.++.... ..+++.+.+...+|||||++||++..+........ .+..+.+.++.....+|+++++||||.
T Consensus 42 ~~G~~~CD~p~~l~~s~l~~i~~~~~~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pv~~~~GNHD~ 121 (296)
T cd00842 42 PWGDYGCDSPWRLVESALEAIKKNHPKPDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKAFPDTPVYPALGNHDS 121 (296)
T ss_pred CCcCcCCCCcHHHHHHHHHHHHHhCCCCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHhCCCCCEEEcCCCCCC
Confidence 36777654431 23444454443489999999999976543211111 234455666666678999999999998
Q ss_pred ccCCCCCC----cccccccccccc--cCCCCC-CCCCCeEEEEe-cCcEEEEEEeccccC-----------CCChHHHHH
Q 040421 176 DFAPQLGE----AIPFKPFANRFH--LPYRAP-YSTAPFWYSIR-RASAHIIVMSCYSAF-----------GKYTPQYKW 236 (407)
Q Consensus 176 ~~~~~~~~----~~~~~~~~~~f~--~P~~~~-~~~~~~~ysf~-~g~v~fi~Lds~~~~-----------~~~~~Q~~W 236 (407)
........ ...+..+...|. +|.... ....+.||++. .+++++|+|||.... .....|++|
T Consensus 122 ~p~~~~~~~~~~~~~~~~~~~~w~~~l~~~~~~~~~~ggYY~~~~~~~l~vI~Lnt~~~~~~~~~~~~~~~~~~~~Ql~W 201 (296)
T cd00842 122 YPVNQFPPNNSPSWLYDALAELWKSWLPEEAEETFKKGGYYSVPVKPGLRVISLNTNLYYKKNFWLLGSNETDPAGQLQW 201 (296)
T ss_pred CcccccCCcccccHHHHHHHHHHHhhcCHHHHHHhhcceEEEEEcCCCeEEEEEeCccccccChhhhccCCCCHHHHHHH
Confidence 53211110 111111222222 232111 11245789988 789999999996321 123689999
Q ss_pred HHHhccccCCCCCCeEEEEeeccccccCCCCCCCChhHHHHHHHHHHhCC--CcEEEeccccccccc
Q 040421 237 LEKEFPKVNRSETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYK--VDVVFAAHVHAYERS 301 (407)
Q Consensus 237 L~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~--vdlvl~GH~H~y~r~ 301 (407)
|+++|+++.+ +...++|++|+|+....... .....+.|.+|+++|. |.++|+||+|..+-.
T Consensus 202 L~~~L~~a~~-~~~~v~I~~HiPp~~~~~~~---~~~~~~~~~~ii~~y~~~i~~~~~GH~H~d~~~ 264 (296)
T cd00842 202 LEDELQEAEQ-AGEKVWIIGHIPPGVNSYDT---LENWSERYLQIINRYSDTIAGQFFGHTHRDEFR 264 (296)
T ss_pred HHHHHHHHHH-CCCeEEEEeccCCCCccccc---chHHHHHHHHHHHHHHHhhheeeecccccceEE
Confidence 9999998642 23467889999997644321 1345678999999997 778999999986544
|
Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but |
| >cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.75 E-value=1e-17 Score=153.34 Aligned_cols=168 Identities=20% Similarity=0.251 Sum_probs=106.2
Q ss_pred HhhhCCCCCceEEEcCCccccCCCCCCCchhhhH----HHHHHhhhhccCCeEEccCCCccccCCCCCCccccccccccc
Q 040421 119 HYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDT----WGRFIERNAAYQPWIWTVGNHEIDFAPQLGEAIPFKPFANRF 194 (407)
Q Consensus 119 ~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~----~~~~~~~~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f 194 (407)
.+.+. .+||+||++||++.... .....+|.+ |.+.+..+....|++.++||||+.+..... ......|.+.|
T Consensus 39 ~~~~~-l~PD~vv~lGDL~d~G~--~~~~~~~~~~~~rf~~i~~~~~~~~pv~~VpGNHDig~~~~~~-~~~~~rf~~~F 114 (257)
T cd08163 39 YMQKQ-LKPDSTIFLGDLFDGGR--DWADEYWKKEYNRFMRIFDPSPGRKMVESLPGNHDIGFGNGVV-LPVRQRFEKYF 114 (257)
T ss_pred HHHHh-cCCCEEEEecccccCCe--eCcHHHHHHHHHHHHHHhcCCCccceEEEeCCCcccCCCCCCC-HHHHHHHHHHh
Confidence 34444 38999999999986422 112344533 333333333347999999999985432110 11123344444
Q ss_pred ccCCCCCCCCCCeEEEEecCcEEEEEEeccccC-----CCChHHHHHHHHhccccCCCCCCeEEEEeeccccccCCCCCC
Q 040421 195 HLPYRAPYSTAPFWYSIRRASAHIIVMSCYSAF-----GKYTPQYKWLEKEFPKVNRSETPWLIVLMHCPLYNSYVHHYM 269 (407)
Q Consensus 195 ~~P~~~~~~~~~~~ysf~~g~v~fi~Lds~~~~-----~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~ 269 (407)
. ..++++++|+++||+|||.... .....|.+||++.|+... ....+||++|+|+|......++
T Consensus 115 g----------~~~~~~~~~~~~fV~Lds~~l~~~~~~~~~~~~~~~l~~~l~~~~--~~~p~ILl~H~Plyr~~~~~cg 182 (257)
T cd08163 115 G----------PTSRVIDVGNHTFVILDTISLSNKDDPDVYQPPREFLHSFSAMKV--KSKPRILLTHVPLYRPPNTSCG 182 (257)
T ss_pred C----------CCceEEEECCEEEEEEccccccCCcccccchhHHHHHHhhhhccC--CCCcEEEEeccccccCCCCCCC
Confidence 2 2358899999999999996321 134679999999988642 3346899999999865432211
Q ss_pred ---C---------Chh----H-HHHHHHHHHhCCCcEEEecccccccccc
Q 040421 270 ---E---------GEP----M-RVLYEPWFVEYKVDVVFAAHVHAYERSE 302 (407)
Q Consensus 270 ---~---------~~~----~-~~~l~~l~~~~~vdlvl~GH~H~y~r~~ 302 (407)
+ +.. + .+.-..||++.+..+||+||+|.|-.+.
T Consensus 183 ~~re~~~~~~~~~g~~yq~~l~~~~s~~il~~~~P~~vfsGhdH~~C~~~ 232 (257)
T cd08163 183 PLRESKTPLPYGYGYQYQNLLEPSLSEVILKAVQPVIAFSGDDHDYCEVV 232 (257)
T ss_pred CccccCCCCCCCCCccceeecCHHHHHHHHHhhCCcEEEecCCCccceeE
Confidence 0 000 1 1233467888899999999999987664
|
Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site |
| >PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11 | Back alignment and domain information |
|---|
Probab=99.74 E-value=6.4e-19 Score=151.93 Aligned_cols=190 Identities=20% Similarity=0.200 Sum_probs=97.9
Q ss_pred cEEEEEecCCCCCCch----hhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHH-HHHhhhhccCCeEEccCCC
Q 040421 99 YTFGLIGDLGQTYYSN----RTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWG-RFIERNAAYQPWIWTVGNH 173 (407)
Q Consensus 99 ~~f~~~gD~~~~~~~~----~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~-~~~~~~~~~~P~~~~~GNH 173 (407)
|||+++||+|...... ..+...... .++|+||++||+++.... ...+.... ..........|+++++|||
T Consensus 1 ~ri~~isD~H~~~~~~~~~~~~~~~~~~~-~~~d~ii~~GD~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~GNH 75 (200)
T PF00149_consen 1 MRILVISDLHGGYDDDSDAFRKLDEIAAE-NKPDFIIFLGDLVDGGNP----SEEWRAQFWFFIRLLNPKIPVYFILGNH 75 (200)
T ss_dssp EEEEEEEBBTTTHHHHCHHHHHHHHHHHH-TTTSEEEEESTSSSSSSH----HHHHHHHHHHHHHHHHTTTTEEEEE-TT
T ss_pred CeEEEEcCCCCCCcchhHHHHHHHHHhcc-CCCCEEEeeccccccccc----cccchhhhccchhhhhcccccccccccc
Confidence 6999999999876433 223333333 389999999999976431 11111111 1233345678999999999
Q ss_pred ccccCCCCCCcccccccccccccCCCCCCCCCCeEEEEecCcEEEEEEeccccCCCC---hHHHHHHHHhccccCCCCCC
Q 040421 174 EIDFAPQLGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRRASAHIIVMSCYSAFGKY---TPQYKWLEKEFPKVNRSETP 250 (407)
Q Consensus 174 D~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ysf~~g~v~fi~Lds~~~~~~~---~~Q~~WL~~~L~~~~~~~~~ 250 (407)
|+.................. ..........+........................ ..++.|+...++. ...+
T Consensus 76 D~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 150 (200)
T PF00149_consen 76 DYYSGNSFYGFYDYQFEDYY--GNYNYYYSYFNNKVIFDNDNFWFNSGNNEYPDYGMEAQQEWWLWLLLLLEA---KNDD 150 (200)
T ss_dssp SSHHHHHHHHHHHHHHSSEE--ECSSEEECTESSEEEEEETTEEEEEHCCHTHHSEHHHHHHHHHHHHHHHHE---EEES
T ss_pred ccceeccccccccccccccc--cccccccccCcceeeecccccccccccccccccccccchhccccccccccc---cccc
Confidence 99521100000000000000 00000000000001111111222222111111111 2233344344333 4567
Q ss_pred eEEEEeeccccccCCCCCC--CChhHHHHHHHHHHhCCCcEEEecccccc
Q 040421 251 WLIVLMHCPLYNSYVHHYM--EGEPMRVLYEPWFVEYKVDVVFAAHVHAY 298 (407)
Q Consensus 251 ~~iv~~H~P~~~~~~~~~~--~~~~~~~~l~~l~~~~~vdlvl~GH~H~y 298 (407)
++||++|+|+++....... .....++.+..++.+++|+++|+||+|.|
T Consensus 151 ~~iv~~H~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~GH~H~~ 200 (200)
T PF00149_consen 151 PVIVFTHHPPYSSSSDSSSYGNESKGREALEELLKKYNVDLVLSGHTHRY 200 (200)
T ss_dssp EEEEEESSSSSTTSSSTHHHSSEEEHHHHHHHHHHHTTCSEEEEESSSSE
T ss_pred ceeEEEecCCCCccccccccchhhccHHHHHHHHhhCCCCEEEeCceecC
Confidence 9999999999876643210 11346778899999999999999999986
|
The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C .... |
| >cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.8e-16 Score=140.70 Aligned_cols=151 Identities=17% Similarity=0.135 Sum_probs=98.6
Q ss_pred CcEEEEEecCCCCCCc------------hhhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhh-ccC
Q 040421 98 PYTFGLIGDLGQTYYS------------NRTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNA-AYQ 164 (407)
Q Consensus 98 ~~~f~~~gD~~~~~~~------------~~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~-~~~ 164 (407)
.|||++++|+|..... ...+.++++. .+||+||++||+++..... ...+..+.++++.+. ..+
T Consensus 2 ~~ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~d~vv~~GDl~~~~~~~---~~~~~~~~~~~~~l~~~~~ 77 (199)
T cd07383 2 KFKILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDA-EKPDLVVLTGDLITGENTN---DNSTSALDKAVSPMIDRKI 77 (199)
T ss_pred ceEEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhh-cCCCEEEECCccccCCCCc---hHHHHHHHHHHHHHHHcCC
Confidence 6899999999986532 1223344444 4899999999999764321 113445555555554 368
Q ss_pred CeEEccCCCccccCCCCCCcccccccccccccCCCCCCCCCCeEEEEecCcEEEEEEeccccCCCChHHHHHHHHhcccc
Q 040421 165 PWIWTVGNHEIDFAPQLGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRRASAHIIVMSCYSAFGKYTPQYKWLEKEFPKV 244 (407)
Q Consensus 165 P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ysf~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~ 244 (407)
|+++++||||.. . .....|++||+++|++.
T Consensus 78 p~~~~~GNHD~~-------------------------------------------------g-~l~~~ql~wL~~~l~~~ 107 (199)
T cd07383 78 PWAATFGNHDGY-------------------------------------------------D-WIRPSQIEWFKETSAAL 107 (199)
T ss_pred CEEEECccCCCC-------------------------------------------------C-CCCHHHHHHHHHHHHHH
Confidence 999999999910 0 12468999999999885
Q ss_pred C--CCCCCeEEEEeeccccccCCCC---------CCC---ChhHHHHHH-HHHHhCCCcEEEecccccccccc
Q 040421 245 N--RSETPWLIVLMHCPLYNSYVHH---------YME---GEPMRVLYE-PWFVEYKVDVVFAAHVHAYERSE 302 (407)
Q Consensus 245 ~--~~~~~~~iv~~H~P~~~~~~~~---------~~~---~~~~~~~l~-~l~~~~~vdlvl~GH~H~y~r~~ 302 (407)
. +....+.++++|+|+....... ..+ .......+. .+.+..+|+++|+||+|.++...
T Consensus 108 ~~~~~~~~~~l~f~H~P~~~~~~~~~~~~~~~g~~~d~~~~~~~~~~~~~~~~~~~~v~~v~~GH~H~~~~~~ 180 (199)
T cd07383 108 KKKYGKPIPSLAFFHIPLPEYREVWEGKGKVPGINNEKVCCPKINSGLFKALLERGDVKGVFCGHDHGNDFCG 180 (199)
T ss_pred hhccCCCCcceEEEecChHHHHhhhcccCCCCccCCcccCCCcCCcHHHHHHHHcCCeEEEEeCCCCCcceec
Confidence 2 2244589999999986542210 001 011222344 44466799999999999987654
|
DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP |
| >cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.7e-16 Score=143.95 Aligned_cols=168 Identities=16% Similarity=0.162 Sum_probs=102.0
Q ss_pred CCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccCCeEEccCCCccccCCCCCCcccccccccccccCCCCCCCCC
Q 040421 126 KGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHEIDFAPQLGEAIPFKPFANRFHLPYRAPYSTA 205 (407)
Q Consensus 126 ~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~ 205 (407)
+||+||++||++.... .......++.++.+ ..|+++|+||||+. ... ...+.+.+ +..+. .-
T Consensus 41 ~~D~viiaGDl~~~~~-----~~~~~~~l~~l~~l--~~~v~~V~GNHD~~-~~~------~~~~~~~l--~~~~~--~~ 102 (232)
T cd07393 41 PEDIVLIPGDISWAMK-----LEEAKLDLAWIDAL--PGTKVLLKGNHDYW-WGS------ASKLRKAL--EESRL--AL 102 (232)
T ss_pred CCCEEEEcCCCccCCC-----hHHHHHHHHHHHhC--CCCeEEEeCCcccc-CCC------HHHHHHHH--HhcCe--EE
Confidence 8999999999984321 11222233334433 34889999999983 111 01111111 11000 00
Q ss_pred CeEEEEecCcEEEEEEeccc----cC-------------CCChHHHHHHHHhccccCCC-CCCeEEEEeeccccccCCCC
Q 040421 206 PFWYSIRRASAHIIVMSCYS----AF-------------GKYTPQYKWLEKEFPKVNRS-ETPWLIVLMHCPLYNSYVHH 267 (407)
Q Consensus 206 ~~~ysf~~g~v~fi~Lds~~----~~-------------~~~~~Q~~WL~~~L~~~~~~-~~~~~iv~~H~P~~~~~~~~ 267 (407)
....++.++++.|++++... .+ .....|+.||++.|+++... ...++|+++|+|++.....
T Consensus 103 ~~n~~~~~~~i~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~L~~~~~~~~~~~~i~~~H~p~~~~~~~- 181 (232)
T cd07393 103 LFNNAYIDDDVAICGTRGWDNPGNPWPPINETLKVEEDEKIFERELERLELSLKAAKKREKEKIKIVMLHYPPANENGD- 181 (232)
T ss_pred eccCcEEECCEEEEEEEeeCCCCCccccccccccchhHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCcCCCCC-
Confidence 01234556789999886311 10 01256899999999875322 2247999999998764321
Q ss_pred CCCChhHHHHHHHHHHhCCCcEEEeccccccccccccccceeeccCCcccccCCCCCceEEEeCCC
Q 040421 268 YMEGEPMRVLYEPWFVEYKVDVVFAAHVHAYERSERMSNIAYNVTNALCSPVSDQSAPVYITIGDG 333 (407)
Q Consensus 268 ~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~g~~~iv~G~g 333 (407)
.+.+..++++++++++|+||+|..++..|+... .+|+.|.++.++
T Consensus 182 -------~~~~~~~~~~~~v~~vl~GH~H~~~~~~~~~~~--------------~~gi~~~~~~~~ 226 (232)
T cd07393 182 -------DSPISKLIEEYGVDICVYGHLHGVGRDRAINGE--------------RGGIRYQLVSAD 226 (232)
T ss_pred -------HHHHHHHHHHcCCCEEEECCCCCCcccccccce--------------ECCEEEEEEcch
Confidence 135678889999999999999999998876432 256667766654
|
DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat |
| >cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.2e-15 Score=133.88 Aligned_cols=167 Identities=11% Similarity=0.037 Sum_probs=100.0
Q ss_pred EEEEecCCCCCCchhhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccCCeEEccCCCccccCCC
Q 040421 101 FGLIGDLGQTYYSNRTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHEIDFAPQ 180 (407)
Q Consensus 101 f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~~~~~ 180 (407)
|+++||+|.+...... ..+ +. .++|+||++||++.... ......+ +.++. ...|+++++||||.....
T Consensus 1 i~~~sD~H~~~~~~~~-~~~-~~-~~~D~vv~~GDl~~~~~-----~~~~~~~-~~l~~--~~~p~~~v~GNHD~~~~~- 68 (188)
T cd07392 1 ILAISDIHGDVEKLEA-IIL-KA-EEADAVIVAGDITNFGG-----KEAAVEI-NLLLA--IGVPVLAVPGNCDTPEIL- 68 (188)
T ss_pred CEEEEecCCCHHHHHH-HHh-hc-cCCCEEEECCCccCcCC-----HHHHHHH-HHHHh--cCCCEEEEcCCCCCHHHH-
Confidence 5789999986532222 222 33 38999999999996421 1122222 33333 357999999999974110
Q ss_pred CCCcccccccccccccCCCCCCCCCCeEEEEecCcEEEEEEecccc------CCCChHHHHHHHHhccccCCCCCCeEEE
Q 040421 181 LGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRRASAHIIVMSCYSA------FGKYTPQYKWLEKEFPKVNRSETPWLIV 254 (407)
Q Consensus 181 ~~~~~~~~~~~~~f~~P~~~~~~~~~~~ysf~~g~v~fi~Lds~~~------~~~~~~Q~~WL~~~L~~~~~~~~~~~iv 254 (407)
......... ..+ ..+.+++++|+++++... .....+|++|+ +.|+. ...+.+|+
T Consensus 69 -------~~~~~~~~~-------~~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~-~~l~~---~~~~~~il 128 (188)
T cd07392 69 -------GLLTSAGLN-------LHG--KVVEVGGYTFVGIGGSNPTPFNTPIELSEEEIVSD-GRLNN---LLAKNLIL 128 (188)
T ss_pred -------HhhhcCcEe-------cCC--CEEEECCEEEEEeCCCCCCCCCCccccCHHHHHHh-hhhhc---cCCCCeEE
Confidence 000000000 011 234567899999987421 12346789998 44443 33457899
Q ss_pred EeeccccccCCCCCCCC-hhHHHHHHHHHHhCCCcEEEeccccccc
Q 040421 255 LMHCPLYNSYVHHYMEG-EPMRVLYEPWFVEYKVDVVFAAHVHAYE 299 (407)
Q Consensus 255 ~~H~P~~~~~~~~~~~~-~~~~~~l~~l~~~~~vdlvl~GH~H~y~ 299 (407)
++|+|++.......... ..-.+.+..++++++++++|+||.|.-.
T Consensus 129 v~H~pp~~~~~d~~~~~~~~g~~~l~~li~~~~~~~~l~GH~H~~~ 174 (188)
T cd07392 129 VTHAPPYGTAVDRVSGGFHVGSKAIRKFIEERQPLLCICGHIHESR 174 (188)
T ss_pred EECCCCcCCcccccCCCCccCCHHHHHHHHHhCCcEEEEecccccc
Confidence 99999976311110101 1123578888999999999999999754
|
PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina |
| >TIGR03767 P_acnes_RR metallophosphoesterase, PPA1498 family | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.4e-15 Score=146.58 Aligned_cols=94 Identities=14% Similarity=0.191 Sum_probs=71.4
Q ss_pred CCeEEEEe-cCcEEEEEEeccccC-----CCChHHHHHHHHhccccCCCCCCeEEEEeeccccccCCCCC-----CCChh
Q 040421 205 APFWYSIR-RASAHIIVMSCYSAF-----GKYTPQYKWLEKEFPKVNRSETPWLIVLMHCPLYNSYVHHY-----MEGEP 273 (407)
Q Consensus 205 ~~~~ysf~-~g~v~fi~Lds~~~~-----~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~-----~~~~~ 273 (407)
+..||+|+ .++++||+|||.... ...++|++||+++|++ .+.+++||++|||++....... .....
T Consensus 290 G~~YYSFd~~ggvrfIvLDSt~~~G~~~G~L~eeQL~WLeqeLa~---a~~k~VVVf~HHPp~s~g~~~~Dp~~pg~~~~ 366 (496)
T TIGR03767 290 GTGYYTFDIAGGVRGISMDTTNRAGGDEGSLGQTQFKWIKDTLRA---SSDTLFVLFSHHTSWSMVNELTDPVDPGEKRH 366 (496)
T ss_pred CCceEEEEeECCEEEEEEeCCCcCCCcCCccCHHHHHHHHHHHhc---CCCCCEEEEECCCCcccccccccccccccccc
Confidence 56799999 899999999996431 2368999999999997 3446899999999987543110 01112
Q ss_pred HHHHHHHHHHhC-CCcEEEeccccccccc
Q 040421 274 MRVLYEPWFVEY-KVDVVFAAHVHAYERS 301 (407)
Q Consensus 274 ~~~~l~~l~~~~-~vdlvl~GH~H~y~r~ 301 (407)
..++|.++|++| +|.++||||.|.-...
T Consensus 367 n~~eLldLL~~ypnV~aVfsGHvH~n~i~ 395 (496)
T TIGR03767 367 LGTELVSLLLEHPNVLAWVNGHTHSNKIT 395 (496)
T ss_pred CHHHHHHHHhcCCCceEEEECCcCCCccc
Confidence 346899999998 8999999999976543
|
This model describes a small collection of probable metallophosphoresterases, related to pfam00149 but with long inserts separating some of the shared motifs such that the homology is apparent only through multiple sequence alignment. Members of this protein family, in general, have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. Members include YP_056203.1 from Propionibacterium acnes KPA171202. |
| >TIGR03729 acc_ester putative phosphoesterase | Back alignment and domain information |
|---|
Probab=99.64 E-value=4.3e-15 Score=135.59 Aligned_cols=176 Identities=14% Similarity=0.157 Sum_probs=103.1
Q ss_pred EEEEEecCCCCCCc---hhhHHH----hhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccCCeEEccCC
Q 040421 100 TFGLIGDLGQTYYS---NRTLTH----YELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGN 172 (407)
Q Consensus 100 ~f~~~gD~~~~~~~---~~~l~~----~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GN 172 (407)
||++++|.|..... ...+++ +.+. ++|+||++||++... .....+++.+..+ ...|+++++||
T Consensus 1 ki~~iSDlH~~~~~~~~~~~l~~~~~~~~~~--~~d~vv~~GDl~~~~-------~~~~~~~~~l~~~-~~~pv~~v~GN 70 (239)
T TIGR03729 1 KIAFSSDLHIDLNHFDTEEMLETLAQYLKKQ--KIDHLHIAGDISNDF-------QRSLPFIEKLQEL-KGIKVTFNAGN 70 (239)
T ss_pred CEEEEEeecCCCCCCCHHHHHHHHHHHHHhc--CCCEEEECCccccch-------hhHHHHHHHHHHh-cCCcEEEECCC
Confidence 68999999975322 222222 3333 799999999999421 1122334433332 35899999999
Q ss_pred CccccCCCCCCcccccccccccccCCCCCCCCCCeEEEEecCcEEEEEEeccccC-------------------------
Q 040421 173 HEIDFAPQLGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRRASAHIIVMSCYSAF------------------------- 227 (407)
Q Consensus 173 HD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ysf~~g~v~fi~Lds~~~~------------------------- 227 (407)
||+..... +..+...+. + ....+.++.+..++++|++++...++
T Consensus 71 HD~~~~~~------~~~~~~~~~-~----~~l~~~~~~~~~~~~~~ig~~gw~d~~~~~~~~~~~~~~~~~d~~~~~~~~ 139 (239)
T TIGR03729 71 HDMLKDLT------YEEIESNDS-P----LYLHNRFIDIPNTQWRIIGNNGWYDYSFSNDKTSKEILRWKKSFWFDRRIK 139 (239)
T ss_pred CCCCCCCC------HHHHHhccc-h----hhhcccccccCCCceEEEeeccceecccccccCHHHHHHhhhcEEeecccC
Confidence 99841110 011111110 0 00112233344467888888842111
Q ss_pred -C-----CChHHHHHHHHhccccCCCCCCeEEEEeeccccccCC------CCCCC-C-hhHHHHHHHHHHhCCCcEEEec
Q 040421 228 -G-----KYTPQYKWLEKEFPKVNRSETPWLIVLMHCPLYNSYV------HHYME-G-EPMRVLYEPWFVEYKVDVVFAA 293 (407)
Q Consensus 228 -~-----~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~------~~~~~-~-~~~~~~l~~l~~~~~vdlvl~G 293 (407)
. ...+|++||++.|+++. .+.+||++|||+..... ..+.. . ......|.+++++++++++|+|
T Consensus 140 ~~~~~~~~~~~~l~~l~~~l~~~~---~~~~ivvtH~pP~~~~~~~~~~~~~~~~~~~~~~s~~l~~li~~~~v~~~i~G 216 (239)
T TIGR03729 140 RPMSDPERTAIVLKQLKKQLNQLD---NKQVIFVTHFVPHRDFIYVPMDHRRFDMFNAFLGSQHFGQLLVKYEIKDVIFG 216 (239)
T ss_pred CCCChHHHHHHHHHHHHHHHHhcC---CCCEEEEEcccchHHHhcCCCCCcchhhhhhccChHHHHHHHHHhCCCEEEEC
Confidence 0 12578999999998742 24589999999855221 11110 0 1113678899999999999999
Q ss_pred cccccc
Q 040421 294 HVHAYE 299 (407)
Q Consensus 294 H~H~y~ 299 (407)
|.|.-.
T Consensus 217 H~H~~~ 222 (239)
T TIGR03729 217 HLHRRF 222 (239)
T ss_pred CccCCC
Confidence 999764
|
Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system. |
| >cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.1e-14 Score=131.52 Aligned_cols=198 Identities=15% Similarity=0.060 Sum_probs=109.5
Q ss_pred CcEEEEEecCCCCCCch-----hhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccCCeEEccCC
Q 040421 98 PYTFGLIGDLGQTYYSN-----RTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGN 172 (407)
Q Consensus 98 ~~~f~~~gD~~~~~~~~-----~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GN 172 (407)
++||++++|+|...... +.++.+.+ .+||+||++||+++.... .. +.+.+.++.+....|+++++||
T Consensus 1 ~~~i~~~sDlH~~~~~~~~~~~~~~~~~~~--~~~d~vl~~GD~~~~~~~----~~--~~~~~~l~~l~~~~~v~~v~GN 72 (223)
T cd07385 1 GLRIAHLSDLHLGPFVSRERLERLVEKINA--LKPDLVVLTGDLVDGSVD----VL--ELLLELLKKLKAPLGVYAVLGN 72 (223)
T ss_pred CCEEEEEeecCCCccCCHHHHHHHHHHHhc--cCCCEEEEcCcccCCcch----hh--HHHHHHHhccCCCCCEEEECCC
Confidence 47999999999875421 22233333 389999999999965321 11 3455666666667899999999
Q ss_pred CccccCCCCCCcccccccccccccCCCCCCCCCCeEEEEecCcEEEEEEeccccCCCChHHHHHHHHhccccCCCCCCeE
Q 040421 173 HEIDFAPQLGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRRASAHIIVMSCYSAFGKYTPQYKWLEKEFPKVNRSETPWL 252 (407)
Q Consensus 173 HD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ysf~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~ 252 (407)
||+...... .+........+. ...+....++.++..+..+-.. .......++.+.++.. .+.++.
T Consensus 73 HD~~~~~~~----~~~~~l~~~~v~-----~L~~~~~~~~~~~~~i~i~G~~----~~~~~~~~~~~~~~~~--~~~~~~ 137 (223)
T cd07385 73 HDYYSGDEE----NWIEALESAGIT-----VLRNESVEISVGGATIGIAGVD----DGLGRRPDLEKALKGL--DEDDPN 137 (223)
T ss_pred cccccCchH----HHHHHHHHcCCE-----EeecCcEEeccCCeEEEEEecc----CccccCCCHHHHHhCC--CCCCCE
Confidence 998532110 000010000010 0122344555555433333211 1112234566666653 344579
Q ss_pred EEEeeccccccCCCCCCCChhHHHHHHHHHHhCCCcEEEecccccccccccccccee---eccCCcccccCCCCCceEEE
Q 040421 253 IVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAYERSERMSNIAY---NVTNALCSPVSDQSAPVYIT 329 (407)
Q Consensus 253 iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~~~~~~---~~~~g~~~~~~~~~g~~~iv 329 (407)
|++.|.|.+.. .+.+.++|++++||+|..|...|...... ....-....+..++..+||.
T Consensus 138 I~l~H~P~~~~-----------------~~~~~~~dl~l~GHtHggqi~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~Vs 200 (223)
T cd07385 138 ILLAHQPDTAE-----------------EAAAWGVDLQLSGHTHGGQIRLPGIGPLVLSKLARPYDYGLYRKGGSQLYVS 200 (223)
T ss_pred EEEecCCChhH-----------------HhcccCccEEEeccCCCCEEeccccccccchhhcCcccceEEEECCEEEEEc
Confidence 99999985321 12567999999999999997766543210 00000001123345567777
Q ss_pred eCCCCC
Q 040421 330 IGDGGN 335 (407)
Q Consensus 330 ~G~gG~ 335 (407)
+|.|..
T Consensus 201 ~G~G~~ 206 (223)
T cd07385 201 RGLGTW 206 (223)
T ss_pred CCccCC
Confidence 777654
|
YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia |
| >cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.58 E-value=2.1e-14 Score=120.58 Aligned_cols=117 Identities=21% Similarity=0.183 Sum_probs=83.1
Q ss_pred EEEEecCCCCCCchhh----------HHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhcc-CCeEEc
Q 040421 101 FGLIGDLGQTYYSNRT----------LTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAY-QPWIWT 169 (407)
Q Consensus 101 f~~~gD~~~~~~~~~~----------l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~-~P~~~~ 169 (407)
|+.++|+|.+...... +.+..+. .++|+|+++||+++... ...|+.+.++++.+... .|++.+
T Consensus 1 il~isD~Hl~~~~~~~~~~~~~~l~~~~~~~~~-~~~d~vi~~GDl~~~~~-----~~~~~~~~~~~~~l~~~~~~~~~v 74 (144)
T cd07400 1 ILHLSDLHFGPERKPELLALLSLLDRLLAEIKA-LDPDLVVITGDLTQRGL-----PEEFEEAREFLDALPAPLEPVLVV 74 (144)
T ss_pred CeEeCccCCCCCcchhHHHHHHHHHHHHHHHhc-cCCCEEEECCCCCCCCC-----HHHHHHHHHHHHHccccCCcEEEe
Confidence 5789999987542111 1112223 48999999999997532 35666777777776544 699999
Q ss_pred cCCCccccCCCCCCcccccccccccccCCCCCCCCCCeEEEEecCcEEEEEEeccccCCCChHHHHHHHHhccccCCCCC
Q 040421 170 VGNHEIDFAPQLGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRRASAHIIVMSCYSAFGKYTPQYKWLEKEFPKVNRSET 249 (407)
Q Consensus 170 ~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ysf~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~ 249 (407)
+||||.
T Consensus 75 ~GNHD~-------------------------------------------------------------------------- 80 (144)
T cd07400 75 PGNHDV-------------------------------------------------------------------------- 80 (144)
T ss_pred CCCCeE--------------------------------------------------------------------------
Confidence 999995
Q ss_pred CeEEEEeeccccccCCCCCCCChhHHHHHHHHHHhCCCcEEEeccccccccc
Q 040421 250 PWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAYERS 301 (407)
Q Consensus 250 ~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~ 301 (407)
|+++|+|++...... ......++.+.+++++++++++|+||+|.....
T Consensus 81 ---iv~~Hhp~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~l~GH~H~~~~~ 128 (144)
T cd07400 81 ---IVVLHHPLVPPPGSG-RERLLDAGDALKLLAEAGVDLVLHGHKHVPYVG 128 (144)
T ss_pred ---EEEecCCCCCCCccc-cccCCCHHHHHHHHHHcCCCEEEECCCCCcCee
Confidence 899999997654321 111114567899999999999999999987644
|
YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv |
| >cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.56 E-value=4.1e-14 Score=121.81 Aligned_cols=145 Identities=16% Similarity=0.251 Sum_probs=86.9
Q ss_pred EEEEecCCCCCCchhhH-HHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccCCeEEccCCCccccCC
Q 040421 101 FGLIGDLGQTYYSNRTL-THYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHEIDFAP 179 (407)
Q Consensus 101 f~~~gD~~~~~~~~~~l-~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~~~~ 179 (407)
|+++||+|.+....... .+.... .++|+++++||+++... ...+...........|+++++||||+..
T Consensus 1 ~~~iSDlH~~~~~~~~~~~~~~~~-~~~d~li~~GDi~~~~~--------~~~~~~~~~~~~~~~~v~~v~GNHD~~~-- 69 (166)
T cd07404 1 IQYLSDLHLEFEDNLADLLNFPIA-PDADILVLAGDIGYLTD--------APRFAPLLLALKGFEPVIYVPGNHEFYV-- 69 (166)
T ss_pred CceEccccccCccccccccccCCC-CCCCEEEECCCCCCCcc--------hHHHHHHHHhhcCCccEEEeCCCcceEE--
Confidence 57899999875433222 122223 48999999999996421 1122222233345689999999999820
Q ss_pred CCCCcccccccccccccCCCCCCCCCCeEEEEecCcEEEEEEeccccCCCChHHHHHHHHhccccCCCCCCeEEEEeecc
Q 040421 180 QLGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRRASAHIIVMSCYSAFGKYTPQYKWLEKEFPKVNRSETPWLIVLMHCP 259 (407)
Q Consensus 180 ~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ysf~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P 259 (407)
.+ .. ...||.+.. ...++.+|+.++++ +.+||++|||
T Consensus 70 ---------~~---~G---------~~~w~~~~~---------------~~~~~~~~~~~d~~-------~~~vv~~Hhp 106 (166)
T cd07404 70 ---------RI---IG---------TTLWSDISL---------------FGEAAARMRMNDFR-------GKTVVVTHHA 106 (166)
T ss_pred ---------EE---Ee---------eecccccCc---------------cchHHHHhCCCCCC-------CCEEEEeCCC
Confidence 00 00 011222211 12245556655554 3689999999
Q ss_pred ccccCCCC-CC---CChhHHHHHHHHHHhCCCcEEEeccccccc
Q 040421 260 LYNSYVHH-YM---EGEPMRVLYEPWFVEYKVDVVFAAHVHAYE 299 (407)
Q Consensus 260 ~~~~~~~~-~~---~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~ 299 (407)
++...... .. .+...++.+..++++++|+++++||+|...
T Consensus 107 P~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~i~GH~H~~~ 150 (166)
T cd07404 107 PSPLSLAPQYGDSLVNAAFAVDLDDLILADPIDLWIHGHTHFNF 150 (166)
T ss_pred CCccccCccccCCCcchhhhhccHhHHhhcCCCEEEECCccccc
Confidence 98754321 11 122345567788889999999999999864
|
MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t |
| >COG1409 Icc Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.4e-13 Score=129.66 Aligned_cols=180 Identities=18% Similarity=0.194 Sum_probs=110.2
Q ss_pred cEEEEEecCCCCC--C-chhhHHHh---hhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccCCeEEccCC
Q 040421 99 YTFGLIGDLGQTY--Y-SNRTLTHY---ELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGN 172 (407)
Q Consensus 99 ~~f~~~gD~~~~~--~-~~~~l~~~---~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GN 172 (407)
++|+.++|.|... . ....+.++ ++. .+||+||++||+++. + ....+....++++......|++++|||
T Consensus 1 ~~i~~isD~H~~~~~~~~~~~~~~~~~~i~~-~~~D~~v~tGDl~~~-~----~~~~~~~~~~~l~~~~~~~~~~~vpGN 74 (301)
T COG1409 1 MRIAHISDLHLGALGVDSEELLEALLAAIEQ-LKPDLLVVTGDLTND-G----EPEEYRRLKELLARLELPAPVIVVPGN 74 (301)
T ss_pred CeEEEEecCcccccccchHHHHHHHHHHHhc-CCCCEEEEccCcCCC-C----CHHHHHHHHHHHhhccCCCceEeeCCC
Confidence 5899999999882 2 22233222 222 388999999999975 2 134455556666644456799999999
Q ss_pred CccccCCCCCCcccccccccccccCCCCCCCCCCeEEEEec-CcEEEEEEeccccC----CCChHHHHHHHHhccccCCC
Q 040421 173 HEIDFAPQLGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRR-ASAHIIVMSCYSAF----GKYTPQYKWLEKEFPKVNRS 247 (407)
Q Consensus 173 HD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ysf~~-g~v~fi~Lds~~~~----~~~~~Q~~WL~~~L~~~~~~ 247 (407)
||..... ...+...+.... ..+-.... +.++++.+|+.... .....|+.||++.|++....
T Consensus 75 HD~~~~~-------~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~d~~~~~~~~G~~~~~q~~~l~~~l~~~~~~ 140 (301)
T COG1409 75 HDARVVN-------GEAFSDQFFNRY-------AVLVGACSSGGWRVIGLDSSVPGVPLGRLGAEQLDWLEEALAAAPER 140 (301)
T ss_pred CcCCchH-------HHHhhhhhcccC-------cceEeeccCCceEEEEecCCCCCCCCCEECHHHHHHHHHHHHhCccc
Confidence 9985211 011111111110 01111112 67899999996431 24689999999999985322
Q ss_pred CCCeEEEEeeccccccCCCCCCCChhHHHHHHHHHHhCC--CcEEEecccccc
Q 040421 248 ETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYK--VDVVFAAHVHAY 298 (407)
Q Consensus 248 ~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~--vdlvl~GH~H~y 298 (407)
....+|+++|||+.................+..++..++ |+++|+||.|.-
T Consensus 141 ~~~~~v~~~hh~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~vl~GH~H~~ 193 (301)
T COG1409 141 AKDTVVVLHHHPLPSPGTGVDRVALRDAGELLDVLIAHGNDVRLVLSGHIHLA 193 (301)
T ss_pred cCceEEEecCCCCCCCCCccceeeeecchhHHHHHHhcCCceEEEEeCccccc
Confidence 112457777777665443221111222345667788887 999999999976
|
|
| >TIGR03768 RPA4764 metallophosphoesterase, RPA4764 family | Back alignment and domain information |
|---|
Probab=99.52 E-value=2.2e-13 Score=130.15 Aligned_cols=92 Identities=16% Similarity=0.259 Sum_probs=64.0
Q ss_pred CCeEEEEe-cCcE--EEEEEecccc---------C--CCChHHHHHHHHhccccCCCCCCeEEEEeeccccccCC-CC--
Q 040421 205 APFWYSIR-RASA--HIIVMSCYSA---------F--GKYTPQYKWLEKEFPKVNRSETPWLIVLMHCPLYNSYV-HH-- 267 (407)
Q Consensus 205 ~~~~ysf~-~g~v--~fi~Lds~~~---------~--~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~-~~-- 267 (407)
+..||+|+ .|++ ++|+||+... + ....+|++||+++|+.+. .+.+++|+++|+|+.+... ..
T Consensus 291 G~~yYsFd~~g~vplrvIvLDSt~~~~~~s~pG~~~G~Ld~eQLaWLe~~La~a~-a~~p~VVV~hHpPi~t~gi~~md~ 369 (492)
T TIGR03768 291 DFACYSFVPKSDVPLKVIVLDDTQSEHDGSHDIHGHGSLDAKRWDWLKAELARGQ-ADGQLMIIAAHIPIAVSPIGSEME 369 (492)
T ss_pred CcceeEEecCCCcceEEEEECCCccccccCCCCCcceeeCHHHHHHHHHHHHhCc-CCCceEEEEeCCCcccCCccchhh
Confidence 34599999 5845 9999998531 1 135899999999999863 2456788888888765221 10
Q ss_pred CC----------CChhHHHHHHHHHHhC-CCcEEEeccccc
Q 040421 268 YM----------EGEPMRVLYEPWFVEY-KVDVVFAAHVHA 297 (407)
Q Consensus 268 ~~----------~~~~~~~~l~~l~~~~-~vdlvl~GH~H~ 297 (407)
+. .+...-.+|..+|++| +|.++||||.|.
T Consensus 370 w~~~~~~~~~~L~n~~~~~eLlaLL~~hPnVla~LsGHvHr 410 (492)
T TIGR03768 370 WWLGAADANPDLQNAVSLTGLVTTLQKYPNLLMWIAGHRHL 410 (492)
T ss_pred hccccccccccccccccHHHHHHHHhcCCCeEEEEcCCccc
Confidence 00 0111124789999999 688999999995
|
This model describes a small collection of probable metallophosphoresterases, related to pfam00149. Members of this protein family usually have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. This model and TIGR03767 divide a narrow clade of pfam00149-related enzymes. |
| >cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.50 E-value=2.6e-13 Score=122.47 Aligned_cols=188 Identities=13% Similarity=0.058 Sum_probs=103.9
Q ss_pred EEEEEecCCCCCCc------------hhhHHHhh---hCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhh-cc
Q 040421 100 TFGLIGDLGQTYYS------------NRTLTHYE---LNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNA-AY 163 (407)
Q Consensus 100 ~f~~~gD~~~~~~~------------~~~l~~~~---~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~-~~ 163 (407)
||++++|+|.+... ..+++++. .+ .++|+||++||++.... .....+..+.+.++.+. ..
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~d~i~~~GD~~~~~~---~~~~~~~~~~~~~~~~~~~~ 76 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIE-EKVDFVLIAGDLFDSNN---PSPEALELLIEALRRLKEAG 76 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHh-cCCCEEEECCcccCCCC---CCHHHHHHHHHHHHHHHHCC
Confidence 68999999987431 11233322 22 38999999999996532 12234555666666654 47
Q ss_pred CCeEEccCCCccccCCCCCCcccccccccccccCCCCCCCCCCeEEEEecCcEEEEEEeccccCCCChHHHHHHHHhccc
Q 040421 164 QPWIWTVGNHEIDFAPQLGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRRASAHIIVMSCYSAFGKYTPQYKWLEKEFPK 243 (407)
Q Consensus 164 ~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ysf~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~ 243 (407)
+|+++++||||...... .......+....... ............+..+++.|++++.... .....+.+++++.+.+
T Consensus 77 ~~v~~~~GNHD~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~i~g~~~~~~-~~~~~~~~~~~~~~~~ 152 (223)
T cd00840 77 IPVFIIAGNHDSPSRLG--ALSPLLALSGLHLVG-VEEDVLTPLLLPKGGTGVAIYGLPYLRR-SRLRDLLADAELRPRP 152 (223)
T ss_pred CCEEEecCCCCCccccc--cccchHhhCcEEEEc-ccCcceeEEEeccCCeEEEEEECCCCCH-HHHHHHHHHHHHHhhc
Confidence 89999999999853211 000000011100000 0000011122334455688888875322 1123344444555544
Q ss_pred cCCCCCCeEEEEeeccccccCCCCCCCChhHHHHHHHHHHhCCCcEEEeccccccccc
Q 040421 244 VNRSETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAYERS 301 (407)
Q Consensus 244 ~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~ 301 (407)
. .+..+.|+++|.|+.......... .......+...++|++++||.|..+..
T Consensus 153 ~--~~~~~~Il~~H~~~~~~~~~~~~~----~~~~~~~~~~~~~d~v~~GH~H~~~~~ 204 (223)
T cd00840 153 L--DPDDFNILLLHGGVAGAGPSDSER----APFVPEALLPAGFDYVALGHIHRPQII 204 (223)
T ss_pred c--CCCCcEEEEEeeeeecCCCCcccc----cccCcHhhcCcCCCEEECCCcccCeee
Confidence 3 345579999999986543221100 123344566789999999999987643
|
Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi |
| >cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.50 E-value=5.9e-13 Score=118.84 Aligned_cols=175 Identities=9% Similarity=0.054 Sum_probs=101.0
Q ss_pred CCcEEEEEecCCCCCCchhhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhc-cCCeEEccCCCcc
Q 040421 97 VPYTFGLIGDLGQTYYSNRTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAA-YQPWIWTVGNHEI 175 (407)
Q Consensus 97 ~~~~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~-~~P~~~~~GNHD~ 175 (407)
...|+++++|+|.+....+.+.+..++ .++|+||++||++.... ..+.+.++++.+.. ..|+++++||||.
T Consensus 3 ~~~kIl~iSDiHgn~~~le~l~~~~~~-~~~D~vv~~GDl~~~g~-------~~~~~~~~l~~l~~l~~pv~~V~GNhD~ 74 (224)
T cd07388 3 TVRYVLATSNPKGDLEALEKLVGLAPE-TGADAIVLIGNLLPKAA-------KSEDYAAFFRILGEAHLPTFYVPGPQDA 74 (224)
T ss_pred ceeEEEEEEecCCCHHHHHHHHHHHhh-cCCCEEEECCCCCCCCC-------CHHHHHHHHHHHHhcCCceEEEcCCCCh
Confidence 357899999999754333333333333 38999999999996421 12233334443322 4799999999996
Q ss_pred ccCCCCCCcccccccccccccCCCCCCCCCCeEEEEec-CcEEEEEEeccccC--CCChHHH----HHHHH----hcccc
Q 040421 176 DFAPQLGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRR-ASAHIIVMSCYSAF--GKYTPQY----KWLEK----EFPKV 244 (407)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ysf~~-g~v~fi~Lds~~~~--~~~~~Q~----~WL~~----~L~~~ 244 (407)
....... ..|......|..- ...... ..+ |+++|+.|+..... ...++|. .||.+ .+..
T Consensus 75 ~v~~~l~-----~~~~~~~~~p~~~--~lh~~~--~~~~g~~~~~GlGGs~~~~~e~sE~e~~~~~~~~~~~~l~~~~~- 144 (224)
T cd07388 75 PLWEYLR-----EAYNAELVHPEIR--NVHETF--AFWRGPYLVAGVGGEIADEGEPEEHEALRYPAWVAEYRLKALWE- 144 (224)
T ss_pred HHHHHHH-----HHhcccccCccce--ecCCCe--EEecCCeEEEEecCCcCCCCCcCHHHHhhhhhhHHHHHHHHHHh-
Confidence 3100000 0111000112100 011122 233 66999999975432 2234442 56433 3333
Q ss_pred CCCCCCeEEEEeeccccccCCCCCCCChhHHHHHHHHHHhCCCcEEEecccc
Q 040421 245 NRSETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVH 296 (407)
Q Consensus 245 ~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H 296 (407)
...+..|+++|+||+..+..+ .-.+.+..++++++..+++|||.|
T Consensus 145 --~~~~~~VLv~H~PP~g~g~~h-----~GS~alr~~I~~~~P~l~i~GHih 189 (224)
T cd07388 145 --LKDYRKVFLFHTPPYHKGLNE-----QGSHEVAHLIKTHNPLVVLVGGKG 189 (224)
T ss_pred --CCCCCeEEEECCCCCCCCCCc-----cCHHHHHHHHHHhCCCEEEEcCCc
Confidence 233478999999999874222 123477789999999999999999
|
This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets, |
| >PRK11340 phosphodiesterase YaeI; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.2e-12 Score=121.58 Aligned_cols=168 Identities=13% Similarity=0.102 Sum_probs=95.6
Q ss_pred CCCcEEEEEecCCCCCC-chhhHHHh---hhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccCCeEEccC
Q 040421 96 DVPYTFGLIGDLGQTYY-SNRTLTHY---ELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVG 171 (407)
Q Consensus 96 ~~~~~f~~~gD~~~~~~-~~~~l~~~---~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~G 171 (407)
..++||++++|+|.+.. ....++++ .+. .+||+|+++||+++.+. ...++.+.+.++.+.+..|+|+|+|
T Consensus 47 ~~~~rI~~lSDlH~~~~~~~~~l~~~v~~i~~-~~pDlVli~GD~~d~~~-----~~~~~~~~~~L~~L~~~~pv~~V~G 120 (271)
T PRK11340 47 AAPFKILFLADLHYSRFVPLSLISDAIALGIE-QKPDLILLGGDYVLFDM-----PLNFSAFSDVLSPLAECAPTFACFG 120 (271)
T ss_pred CCCcEEEEEcccCCCCcCCHHHHHHHHHHHHh-cCCCEEEEccCcCCCCc-----cccHHHHHHHHHHHhhcCCEEEecC
Confidence 35799999999998632 22223322 222 38999999999985221 1234566777777776789999999
Q ss_pred CCccccCCCCCCcccccccccccccCCCCCCCCCCeEEEEecCc--EEEEEEeccccCCCChHHHHHHHHhccccCCCCC
Q 040421 172 NHEIDFAPQLGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRRAS--AHIIVMSCYSAFGKYTPQYKWLEKEFPKVNRSET 249 (407)
Q Consensus 172 NHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ysf~~g~--v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~ 249 (407)
|||+...... ...+.+.+. ..+..-..+....+..++ +.++.+|.... +... ..+.+++ .
T Consensus 121 NHD~~~~~~~-----~~~~~~~l~--~~gi~lL~n~~~~i~~~~~~i~i~G~~d~~~---~~~~---~~~~~~~-----~ 182 (271)
T PRK11340 121 NHDRPVGTEK-----NHLIGETLK--SAGITVLFNQATVIATPNRQFELVGTGDLWA---GQCK---PPPASEA-----N 182 (271)
T ss_pred CCCcccCccc-----hHHHHHHHH--hcCcEEeeCCeEEEeeCCcEEEEEEecchhc---cCCC---hhHhcCC-----C
Confidence 9998421100 001111110 000011123344454443 66777763211 1111 1122222 2
Q ss_pred CeEEEEeeccccccCCCCCCCChhHHHHHHHHHHhCCCcEEEecccccccccccc
Q 040421 250 PWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAYERSERM 304 (407)
Q Consensus 250 ~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~ 304 (407)
...|++.|.|-.- +.+.+.++||+||||+|.-|-..|.
T Consensus 183 ~~~IlL~H~P~~~-----------------~~~~~~~~dL~lsGHTHGGQi~lP~ 220 (271)
T PRK11340 183 LPRLVLAHNPDSK-----------------EVMRDEPWDLMLCGHTHGGQLRVPL 220 (271)
T ss_pred CCeEEEEcCCChh-----------------HhhccCCCCEEEeccccCCeEEccc
Confidence 3689999999431 1234678999999999987766554
|
|
| >PF14008 Metallophos_C: Iron/zinc purple acid phosphatase-like protein C; PDB: 3KBP_B 1KBP_B 4KBP_C 2QFP_B 2QFR_A 1XZW_B | Back alignment and domain information |
|---|
Probab=99.45 E-value=2.3e-13 Score=95.99 Aligned_cols=62 Identities=35% Similarity=0.634 Sum_probs=40.5
Q ss_pred CCceEEEeCCCCCCCCCcccCCCCCCCccceeeCcceEEEEEEeeccEEEEEEEEcCCCceeeeeeE
Q 040421 323 SAPVYITIGDGGNQEGLAKEMTEPQPRYSAYREASFGHGILDVKNRTHAYFGWHRNQDDYAVEADSV 389 (407)
Q Consensus 323 ~g~~~iv~G~gG~~~~~~~~~~~~~p~~~~~~~~~~Gf~~l~v~~~~~~~~~~~~~~~g~~~~~D~~ 389 (407)
++|||||+|+||+... .+..++|+|++++...+||++|++.|.++|.|+|+++.||+|+ |+|
T Consensus 1 kapVhiv~G~aG~~l~---~~~~~~~~wsa~r~~~~Gy~~l~v~N~T~l~~e~i~~~~g~v~--D~f 62 (62)
T PF14008_consen 1 KAPVHIVVGAAGNGLD---PFPYPPPEWSAFRDSEYGYGRLTVANATHLHWEFIRSDDGSVL--DEF 62 (62)
T ss_dssp TS-EEEEE--S-T-------B-SS--TTEEEEE---EEEEEEE-SSSEEEEEEEETTS-T-C--EE-
T ss_pred CCCEEEEECcCCCCcc---cccCCCCCeeeeeccccCEEEEEEEcCCeEEEEEEECCCCcEe--cCC
Confidence 4789999999999432 3556788999999999999999999999999999999999986 987
|
|
| >cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.37 E-value=7.7e-12 Score=102.16 Aligned_cols=117 Identities=24% Similarity=0.271 Sum_probs=81.8
Q ss_pred EEEecCCCCCCchhhHH--HhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccCCeEEccCCCccccCC
Q 040421 102 GLIGDLGQTYYSNRTLT--HYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHEIDFAP 179 (407)
Q Consensus 102 ~~~gD~~~~~~~~~~l~--~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~~~~ 179 (407)
+++||+|.......... ...+. .++|+||++||+++... ...+..+...........|+++++||||
T Consensus 1 ~~~gD~h~~~~~~~~~~~~~~~~~-~~~~~vi~~GD~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~GNHD----- 69 (131)
T cd00838 1 AVISDIHGNLEALEAVLEAALAAA-EKPDFVLVLGDLVGDGP-----DPEEVLAAALALLLLLGIPVYVVPGNHD----- 69 (131)
T ss_pred CeeecccCCccchHHHHHHHHhcc-cCCCEEEECCcccCCCC-----CchHHHHHHHHHhhcCCCCEEEeCCCce-----
Confidence 36899998765433322 22233 48999999999997543 1223333223333446799999999999
Q ss_pred CCCCcccccccccccccCCCCCCCCCCeEEEEecCcEEEEEEeccccCCCChHHHHHHHHhccccCCCCCCeEEEEeecc
Q 040421 180 QLGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRRASAHIIVMSCYSAFGKYTPQYKWLEKEFPKVNRSETPWLIVLMHCP 259 (407)
Q Consensus 180 ~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ysf~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P 259 (407)
|+++|.|
T Consensus 70 -------------------------------------------------------------------------i~~~H~~ 76 (131)
T cd00838 70 -------------------------------------------------------------------------ILLTHGP 76 (131)
T ss_pred -------------------------------------------------------------------------EEEeccC
Confidence 8999999
Q ss_pred ccccCCCCCCCChhHHHHHHHHHHhCCCcEEEecccccccccc
Q 040421 260 LYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAYERSE 302 (407)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~ 302 (407)
++.............+..+..++.+.+++++|+||.|.+.+..
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~ 119 (131)
T cd00838 77 PYDPLDELSPDEDPGSEALLELLEKYGVDLVLSGHTHVYERRE 119 (131)
T ss_pred CCCCchhhcccchhhHHHHHHHHHHhCCCEEEeCCeecccccc
Confidence 8776543222222246788889999999999999999999875
|
Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me |
| >KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.8e-10 Score=105.15 Aligned_cols=196 Identities=18% Similarity=0.231 Sum_probs=106.2
Q ss_pred CCCcEEEEEecCCCCCC-----------------c---hhhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHH
Q 040421 96 DVPYTFGLIGDLGQTYY-----------------S---NRTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGR 155 (407)
Q Consensus 96 ~~~~~f~~~gD~~~~~~-----------------~---~~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~ 155 (407)
.+.|||+.++|+|.+.. . ..-++++++. ++||||+++||+++.... ...-..+.+
T Consensus 51 ~g~fKIlqvaDlH~g~g~~~~c~d~~p~~~~~csD~nTt~F~~rvL~s-E~PDlVVfTGD~i~g~~t----~Da~~sl~k 125 (379)
T KOG1432|consen 51 DGTFKILQVADLHFGFGRETRCRDVLPSEEACCSDLNTTNFVSRVLAS-EKPDLVVFTGDNIFGHST----QDAATSLMK 125 (379)
T ss_pred CCceEEEEeeccccccCCCccccccCcchhhhhcCccHHHHHHHHHhc-cCCCEEEEeCCccccccc----HhHHHHHHH
Confidence 47899999999998643 0 1224566666 499999999999976331 122233556
Q ss_pred HHhhh-hccCCeEEccCCCccccCCCCCCcccccccccccccCCC--------CCC--CCCCeEEEEe-cC---------
Q 040421 156 FIERN-AAYQPWIWTVGNHEIDFAPQLGEAIPFKPFANRFHLPYR--------APY--STAPFWYSIR-RA--------- 214 (407)
Q Consensus 156 ~~~~~-~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~--------~~~--~~~~~~ysf~-~g--------- 214 (407)
.++|. ...+||.+++||||-...-.. .+ ...+.. .+|.. +.. ..+-..|... +|
T Consensus 126 AvaP~I~~~IPwA~~lGNHDdes~ltr-~q--l~~~i~--~lP~s~~~v~p~dg~~~~~~g~gnyn~~i~~~~ds~~~~~ 200 (379)
T KOG1432|consen 126 AVAPAIDRKIPWAAVLGNHDDESDLTR-LQ--LMKFIS--KLPYSLSQVNPPDGHMYIIDGFGNYNLQIEGAIDSELENK 200 (379)
T ss_pred HhhhHhhcCCCeEEEecccccccccCH-HH--HHHHHh--cCCCccccCCCcccceeeeecccceEEEeccCCCcccccC
Confidence 66654 467999999999997522100 00 000100 01111 100 0000111111 11
Q ss_pred -cEEEEEEecccc---------CC-CChHHHHHHHHhccc---cCCCCCC-eEEEEeecccc--ccCCCCC------CCC
Q 040421 215 -SAHIIVMSCYSA---------FG-KYTPQYKWLEKEFPK---VNRSETP-WLIVLMHCPLY--NSYVHHY------MEG 271 (407)
Q Consensus 215 -~v~fi~Lds~~~---------~~-~~~~Q~~WL~~~L~~---~~~~~~~-~~iv~~H~P~~--~~~~~~~------~~~ 271 (407)
-.-+++||+... |+ ....|..||+..-.. .+..-.| .-+++.|.|+- ..-.... .++
T Consensus 201 sv~~lyfld~~~~~s~~~~~~~Ydwik~sq~~wl~~~~~~~~~~~~~~~P~p~La~~HIP~~E~~~~~~~tp~~g~~~E~ 280 (379)
T KOG1432|consen 201 SVFNLYFLDSSSYTSVPPLLPGYDWIKESQLEWLSDTSKEFKEPNSKYNPQPGLAFFHIPLPEFLELESKTPLIGVFQEG 280 (379)
T ss_pred ceeeEEEEecCCcccccccccCccchhhhhHHHHhhhhhhhhcccCccCCCCceEEEEcccHHHhhccCCCcccceeecc
Confidence 124567776432 11 136799999887622 1111122 46889999973 2222110 010
Q ss_pred ---hhHHHHHHHHHH-hCCCcEEEeccccccccc
Q 040421 272 ---EPMRVLYEPWFV-EYKVDVVFAAHVHAYERS 301 (407)
Q Consensus 272 ---~~~~~~l~~l~~-~~~vdlvl~GH~H~y~r~ 301 (407)
......+...|. ..+|++|++||+|.-.--
T Consensus 281 ~~~~~~~sg~~~~L~~r~~Vk~vf~GHdHvNDfC 314 (379)
T KOG1432|consen 281 VSASKHNSGFLTTLVNRGNVKGVFCGHDHVNDFC 314 (379)
T ss_pred ccccccccHHHHHHHhccCcceEEecccccccee
Confidence 112234556666 789999999999975443
|
|
| >PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [] | Back alignment and domain information |
|---|
Probab=99.30 E-value=1.6e-11 Score=104.17 Aligned_cols=154 Identities=20% Similarity=0.219 Sum_probs=89.0
Q ss_pred cEEEEEecCCCCCCchh-hHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccCCeEEccCCCcccc
Q 040421 99 YTFGLIGDLGQTYYSNR-TLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHEIDF 177 (407)
Q Consensus 99 ~~f~~~gD~~~~~~~~~-~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~~ 177 (407)
+||+++||+|.+..... .++.+ + ++|+|+++||++.. .++.+.++.+ |++++.||||...
T Consensus 1 Mki~~~sD~H~~~~~~~~~~~~~--~--~~d~vi~~GDi~~~-----------~~~~~~~~~~----~~~~v~GNHD~~~ 61 (156)
T PF12850_consen 1 MKIAVISDLHGNLDALEAVLEYI--N--EPDFVIILGDIFDP-----------EEVLELLRDI----PVYVVRGNHDNWA 61 (156)
T ss_dssp EEEEEEE--TTTHHHHHHHHHHH--T--TESEEEEES-SCSH-----------HHHHHHHHHH----EEEEE--CCHSTH
T ss_pred CEEEEEeCCCCChhHHHHHHHHh--c--CCCEEEECCCchhH-----------HHHHHHHhcC----CEEEEeCCccccc
Confidence 68999999998644322 23323 2 79999999999831 3445555443 9999999999631
Q ss_pred CCCCCCcccccccccccccCCCCCCCCCCeEEEEecCcEEEEEEeccccCCCChHHHHHHHHhccccCCCCCCeEEEEee
Q 040421 178 APQLGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRRASAHIIVMSCYSAFGKYTPQYKWLEKEFPKVNRSETPWLIVLMH 257 (407)
Q Consensus 178 ~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ysf~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H 257 (407)
+...... .. +.+.+.. .-....|+++|
T Consensus 62 ------------~~~~~~~---------~~-----------------------------~~~~~~~---~~~~~~i~~~H 88 (156)
T PF12850_consen 62 ------------FPNENDE---------EY-----------------------------LLDALRL---TIDGFKILLSH 88 (156)
T ss_dssp ------------HHSEECT---------CS-----------------------------SHSEEEE---EETTEEEEEES
T ss_pred ------------chhhhhc---------cc-----------------------------cccceee---eecCCeEEEEC
Confidence 1111000 00 1111111 11246888889
Q ss_pred ccccccCCCCCCCChhHHHHHHHHHHhCCCcEEEeccccccccccccccceeeccCCcccccCCCCCceEEEeCCCCCCC
Q 040421 258 CPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAYERSERMSNIAYNVTNALCSPVSDQSAPVYITIGDGGNQE 337 (407)
Q Consensus 258 ~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~g~~~iv~G~gG~~~ 337 (407)
.+++.... ..+.+..++...+++++++||.|..+... .+++.++..|+-+...
T Consensus 89 ~~~~~~~~--------~~~~~~~~~~~~~~~~~~~GH~H~~~~~~-------------------~~~~~~~~~Gs~~~~~ 141 (156)
T PF12850_consen 89 GHPYDVQW--------DPAELREILSRENVDLVLHGHTHRPQVFK-------------------IGGIHVINPGSIGGPR 141 (156)
T ss_dssp STSSSSTT--------THHHHHHHHHHTTSSEEEESSSSSEEEEE-------------------ETTEEEEEE-GSSS-S
T ss_pred CCCccccc--------ChhhhhhhhcccCCCEEEcCCcccceEEE-------------------ECCEEEEECCcCCCCC
Confidence 87665321 12345677889999999999999977654 1456677777765432
Q ss_pred CCcccCCCCCCCccceeeCcceEEEEEEee
Q 040421 338 GLAKEMTEPQPRYSAYREASFGHGILDVKN 367 (407)
Q Consensus 338 ~~~~~~~~~~p~~~~~~~~~~Gf~~l~v~~ 367 (407)
. .. ..+|+++++.+
T Consensus 142 ~---------------~~-~~~~~i~~~~~ 155 (156)
T PF12850_consen 142 H---------------GD-QSGYAILDIED 155 (156)
T ss_dssp S---------------SS-SEEEEEEEETT
T ss_pred C---------------CC-CCEEEEEEEec
Confidence 1 01 36899998854
|
; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A .... |
| >cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.22 E-value=1.1e-10 Score=96.67 Aligned_cols=117 Identities=15% Similarity=0.087 Sum_probs=74.2
Q ss_pred EEEEEecCCCCCCchhhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccCCeEEccCCCccccCC
Q 040421 100 TFGLIGDLGQTYYSNRTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHEIDFAP 179 (407)
Q Consensus 100 ~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~~~~ 179 (407)
||+++||+|.... .... .++|+++++||++.... ...++.+.+.++.+.. .++++++||||...
T Consensus 1 ~i~~isD~H~~~~-------~~~~-~~~D~vi~~GD~~~~~~-----~~~~~~~~~~l~~~~~-~~~~~v~GNHD~~~-- 64 (135)
T cd07379 1 RFVCISDTHSRHR-------TISI-PDGDVLIHAGDLTERGT-----LEELQKFLDWLKSLPH-PHKIVIAGNHDLTL-- 64 (135)
T ss_pred CEEEEeCCCCCCC-------cCcC-CCCCEEEECCCCCCCCC-----HHHHHHHHHHHHhCCC-CeEEEEECCCCCcC--
Confidence 5899999997643 1222 38999999999985321 2333444555554321 23578999999720
Q ss_pred CCCCcccccccccccccCCCCCCCCCCeEEEEecCcEEEEEEeccccCCCChHHHHHHHHhccccCCCCCCeEEEEeecc
Q 040421 180 QLGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRRASAHIIVMSCYSAFGKYTPQYKWLEKEFPKVNRSETPWLIVLMHCP 259 (407)
Q Consensus 180 ~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ysf~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P 259 (407)
. + . .+.|+++|.|
T Consensus 65 --------~----------------------------------------------------~-----~--~~~ilv~H~~ 77 (135)
T cd07379 65 --------D----------------------------------------------------P-----E--DTDILVTHGP 77 (135)
T ss_pred --------C----------------------------------------------------C-----C--CCEEEEECCC
Confidence 0 1 1 2568889999
Q ss_pred ccccCCCCCCCChhHHHHHHHHHHhCCCcEEEeccccccc
Q 040421 260 LYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAYE 299 (407)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~ 299 (407)
++............-.+.+..++++++++++|+||+|...
T Consensus 78 p~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~GH~H~~~ 117 (135)
T cd07379 78 PYGHLDLVSSGQRVGCEELLNRVQRVRPKLHVFGHIHEGY 117 (135)
T ss_pred CCcCccccccCcccCCHHHHHHHHHHCCcEEEEcCcCCcC
Confidence 8765432111011112456677888999999999999864
|
239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme |
| >COG1408 Predicted phosphohydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.22 E-value=1.3e-10 Score=107.66 Aligned_cols=84 Identities=15% Similarity=0.135 Sum_probs=60.8
Q ss_pred EEEcCCCCCCCCCcEEEEEecCCCCCCchh---hHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhc
Q 040421 86 SFTTPPGVGPDVPYTFGLIGDLGQTYYSNR---TLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAA 162 (407)
Q Consensus 86 ~F~T~p~~~~~~~~~f~~~gD~~~~~~~~~---~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~ 162 (407)
.-.++.......+++++.++|.|....... .+.++... .||+|+++||++... .......+.+.++++.+
T Consensus 32 ~i~~~~~~~~~~~~~iv~lSDlH~~~~~~~~~~~~~~i~~~--~~DlivltGD~~~~~-----~~~~~~~~~~~L~~L~~ 104 (284)
T COG1408 32 TILTPKLPASLQGLKIVQLSDLHSLPFREEKLALLIAIANE--LPDLIVLTGDYVDGD-----RPPGVAALALFLAKLKA 104 (284)
T ss_pred EeecCCCCcccCCeEEEEeehhhhchhhHHHHHHHHHHHhc--CCCEEEEEeeeecCC-----CCCCHHHHHHHHHhhhc
Confidence 334444444567899999999998754422 22233333 679999999999641 13456677888888888
Q ss_pred cCCeEEccCCCccc
Q 040421 163 YQPWIWTVGNHEID 176 (407)
Q Consensus 163 ~~P~~~~~GNHD~~ 176 (407)
..++++++||||+.
T Consensus 105 ~~gv~av~GNHd~~ 118 (284)
T COG1408 105 PLGVFAVLGNHDYG 118 (284)
T ss_pred cCCEEEEecccccc
Confidence 99999999999995
|
|
| >PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.10 E-value=3.8e-10 Score=103.13 Aligned_cols=177 Identities=14% Similarity=0.084 Sum_probs=92.4
Q ss_pred cEEEEEecCCCCCCchh---hH-HHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhcc-CCeEEccCCC
Q 040421 99 YTFGLIGDLGQTYYSNR---TL-THYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAY-QPWIWTVGNH 173 (407)
Q Consensus 99 ~~f~~~gD~~~~~~~~~---~l-~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~-~P~~~~~GNH 173 (407)
+|+++++|+|.+..... .+ +.+.....++|+|+++||++..-..............+.++.+... +|+++++|||
T Consensus 1 M~i~~iSDlHl~~~~~~~~~~~~~~l~~~~~~~d~l~i~GDl~d~~~g~~~~~~~~~~~~~~l~~l~~~g~~v~~v~GNH 80 (241)
T PRK05340 1 MPTLFISDLHLSPERPAITAAFLRFLRGEARQADALYILGDLFEAWIGDDDPSPFAREIAAALKALSDSGVPCYFMHGNR 80 (241)
T ss_pred CcEEEEeecCCCCCChhHHHHHHHHHHhhhccCCEEEEccceeccccccCcCCHHHHHHHHHHHHHHHcCCeEEEEeCCC
Confidence 47999999998754322 22 2222222389999999999953110000012223445566666544 8999999999
Q ss_pred ccccCCCCCCcccccccccccc---cCCCCCCCCCCeEEEEecCcEEEEEEeccccCCCChHHHHHHHHhccccCCCCCC
Q 040421 174 EIDFAPQLGEAIPFKPFANRFH---LPYRAPYSTAPFWYSIRRASAHIIVMSCYSAFGKYTPQYKWLEKEFPKVNRSETP 250 (407)
Q Consensus 174 D~~~~~~~~~~~~~~~~~~~f~---~P~~~~~~~~~~~ysf~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~ 250 (407)
|.... ..+.+... +| ....+++++.++++.-... +...+..++++.+.+...
T Consensus 81 D~~~~---------~~~~~~~g~~~l~---------~~~~~~~~g~~i~l~HGd~-~~~~d~~y~~~r~~~r~~------ 135 (241)
T PRK05340 81 DFLLG---------KRFAKAAGMTLLP---------DPSVIDLYGQRVLLLHGDT-LCTDDKAYQRFRRKVRNP------ 135 (241)
T ss_pred chhhh---------HHHHHhCCCEEeC---------CcEEEEECCEEEEEECCcc-cccCCHHHHHHHHHHhCH------
Confidence 97421 11111111 12 1234566777666654421 112334455555554431
Q ss_pred eEEEEeeccccccCCC---------------CCC-CChhHHHHHHHHHHhCCCcEEEecccccccc
Q 040421 251 WLIVLMHCPLYNSYVH---------------HYM-EGEPMRVLYEPWFVEYKVDVVFAAHVHAYER 300 (407)
Q Consensus 251 ~~iv~~H~P~~~~~~~---------------~~~-~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r 300 (407)
+...++|.+++..... ... ......+.+.+++++++++++++||+|.-..
T Consensus 136 ~~~~~~~~~p~~~~~~ia~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GH~H~~~~ 201 (241)
T PRK05340 136 WLQWLFLALPLSIRLRIAAKMRAKSKAANQSKSLEIMDVNPEAVAALMEKHGVDTLIHGHTHRPAI 201 (241)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHHhcCCCcccccCCCHHHHHHHHHHhCCCEEEECcccCcce
Confidence 2222233333211000 000 0001124577888999999999999997654
|
|
| >cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.09 E-value=3.3e-10 Score=98.18 Aligned_cols=108 Identities=19% Similarity=0.312 Sum_probs=68.5
Q ss_pred CCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhh---hccCCeEEccCCCccccCCCCCCcccccccccccccCCCCC
Q 040421 125 IKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERN---AAYQPWIWTVGNHEIDFAPQLGEAIPFKPFANRFHLPYRAP 201 (407)
Q Consensus 125 ~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~---~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~ 201 (407)
.+||+|+++||+++.... .....|.+..+.+..+ ...+|++.++||||.+..... ....-.++|.
T Consensus 41 l~PD~Vi~lGDL~D~G~~--~~~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG~~~~~----~~~~~v~RF~------ 108 (195)
T cd08166 41 VQPDIVIFLGDLMDEGSI--ANDDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIGGEEED----PIESKIRRFE------ 108 (195)
T ss_pred cCCCEEEEeccccCCCCC--CCHHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcCCCCCC----cCHHHHHHHH------
Confidence 489999999999976542 1233444433333333 235899999999999632100 0001112221
Q ss_pred CCCCCeEEEEecCcEEEEEEeccccCCCChHHHHHHHHhccccCCCCCCeEEEEeeccccccCCCCCCCChhHHHHHHHH
Q 040421 202 YSTAPFWYSIRRASAHIIVMSCYSAFGKYTPQYKWLEKEFPKVNRSETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPW 281 (407)
Q Consensus 202 ~~~~~~~ysf~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l 281 (407)
.+| |+++|.|+..... ..+..+
T Consensus 109 -----~~F-------------------------------------------i~lsH~P~~~~~~----------~~~~~~ 130 (195)
T cd08166 109 -----KYF-------------------------------------------IMLSHVPLLAEGG----------QALKHV 130 (195)
T ss_pred -----Hhh-------------------------------------------eeeeccccccccc----------HHHHHH
Confidence 011 8999999876442 155678
Q ss_pred HHhCCCcEEEecccccccccc
Q 040421 282 FVEYKVDVVFAAHVHAYERSE 302 (407)
Q Consensus 282 ~~~~~vdlvl~GH~H~y~r~~ 302 (407)
+.+++++++|+||.|.+....
T Consensus 131 ~~~~~p~~Ifs~H~H~s~~~~ 151 (195)
T cd08166 131 VTDLDPDLIFSAHRHKSSIFM 151 (195)
T ss_pred HHhcCceEEEEcCccceeeEE
Confidence 889999999999999876653
|
A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R |
| >cd07389 MPP_PhoD Bacillus subtilis PhoD and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.08 E-value=2.5e-09 Score=96.91 Aligned_cols=164 Identities=16% Similarity=0.073 Sum_probs=98.1
Q ss_pred EEEEEecCCCCCCchhhHHHhh---hCCCCCceEEEcCCccccCCCCCC--------------CchhhhHHH--------
Q 040421 100 TFGLIGDLGQTYYSNRTLTHYE---LNPIKGQTVLFVGDLSYADDYPFH--------------DNNRWDTWG-------- 154 (407)
Q Consensus 100 ~f~~~gD~~~~~~~~~~l~~~~---~~~~~~d~vl~~GD~~y~~~~~~~--------------~~~~~~~~~-------- 154 (407)
||++.++.+...........+. .. .+|||+|++||.+|.+..... ....-+.+.
T Consensus 1 r~a~~SC~~~~~~~~~~~~~~~~~~~~-~~~d~~l~~GD~IY~d~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~Y~~~~~ 79 (228)
T cd07389 1 RFAFGSCNKYESGYFNAYRALAYDHSE-EDPDLFLHLGDQIYADDVGGLMPALIEGRPLEPAHEALTLEEYRERYRQYRS 79 (228)
T ss_pred CEEEEECCCCCCCCcHHHHHHhhhccc-cCCCEEEEcCCeecccCCCcccccccCCcCcCCcccccCHHHHHHHHHHHcC
Confidence 5788888877655444444443 23 389999999999999863210 001111121
Q ss_pred -HHHhhhhccCCeEEccCCCccccCCCCCCc-------------ccccccccccccCCCCCC--CCCCeEEEEecCcE-E
Q 040421 155 -RFIERNAAYQPWIWTVGNHEIDFAPQLGEA-------------IPFKPFANRFHLPYRAPY--STAPFWYSIRRASA-H 217 (407)
Q Consensus 155 -~~~~~~~~~~P~~~~~GNHD~~~~~~~~~~-------------~~~~~~~~~f~~P~~~~~--~~~~~~ysf~~g~v-~ 217 (407)
..++.+.+.+|++.++.+||+..+...... .....|...+..+..... .....|+++.+|.. .
T Consensus 80 ~p~~~~~~~~~p~~~iwDDHDi~~n~~~~~~~~~~~~~~~~~~~~a~~ay~e~~~~~~~~~~~~~~~~~y~~~~~G~~~~ 159 (228)
T cd07389 80 DPDLQRLLAQVPTIGIWDDHDIGDNWGGDGAWVQDSPVFYARKAAARQAYLEFQPVRNPSPRRGGRGGIYRSFRFGDLVD 159 (228)
T ss_pred CHHHHHHhhcCCEEEeccccccccccccccccccCcchHHHHHHHHHHHHHHHcCCCCCCccCCCCceEEEEEecCCcce
Confidence 223456678999999999999643221100 011233333333322221 34568999999996 9
Q ss_pred EEEEeccccCCCChHHHHHHHHhccccCCCCCCeEEEEeeccccccCCCCCCCChhHHHHHHHHHHhCC--CcEEEeccc
Q 040421 218 IIVMSCYSAFGKYTPQYKWLEKEFPKVNRSETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYK--VDVVFAAHV 295 (407)
Q Consensus 218 fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~--vdlvl~GH~ 295 (407)
|++||+...- ..+......|+.+..++.+.+ -.++|||++
T Consensus 160 ~~~lD~R~~R--------------------------------------d~W~~~~~er~~l~~~~~~~~~~~vv~lSGDv 201 (228)
T cd07389 160 LILLDTRTYR--------------------------------------DSWDGYPAERERLLDLLAKRKIKNVVFLSGDV 201 (228)
T ss_pred EEEEeccccc--------------------------------------ccccccHHHHHHHHHHHHHhCCCCeEEEecHH
Confidence 9999985431 122233456667777655543 348999999
Q ss_pred ccccccc
Q 040421 296 HAYERSE 302 (407)
Q Consensus 296 H~y~r~~ 302 (407)
|...-..
T Consensus 202 H~~~~~~ 208 (228)
T cd07389 202 HLAEASD 208 (228)
T ss_pred HHHHHhh
Confidence 9766554
|
PhoD (also known as alkaline phosphatase D/APaseD in Bacillus subtilis) is a secreted phosphodiesterase encoded by phoD of the Pho regulon in Bacillus subtilis. PhoD homologs are found in prokaryotes, eukaryotes, and archaea. PhoD contains a twin arginine (RR) motif and is transported by the Tat (Twin-arginine translocation) translocation pathway machinery (TatAyCy). This family also includes the Fusarium oxysporum Fso1 protein. PhoD belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF |
| >cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.08 E-value=4.1e-09 Score=94.45 Aligned_cols=64 Identities=22% Similarity=0.314 Sum_probs=42.5
Q ss_pred cEEEEEecCCCCCCchhhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccCCeEEccCCCcccc
Q 040421 99 YTFGLIGDLGQTYYSNRTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHEIDF 177 (407)
Q Consensus 99 ~~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~~ 177 (407)
+||+++||.|..... ..+..+ +. .+||+||++||++.. . ..+.+.+..+ ..|+++++||||...
T Consensus 1 ~rIa~isDiHg~~~~-~~~~~l-~~-~~pD~Vl~~GDi~~~--------~--~~~~~~l~~l--~~p~~~V~GNHD~~~ 64 (238)
T cd07397 1 LRIAIVGDVHGQWDL-EDIKAL-HL-LQPDLVLFVGDFGNE--------S--VQLVRAISSL--PLPKAVILGNHDAWY 64 (238)
T ss_pred CEEEEEecCCCCchH-HHHHHH-hc-cCCCEEEECCCCCcC--------h--HHHHHHHHhC--CCCeEEEcCCCcccc
Confidence 589999999976432 222333 33 389999999999732 1 1233333332 369999999999854
|
DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy |
| >cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.4e-09 Score=92.30 Aligned_cols=58 Identities=21% Similarity=0.180 Sum_probs=39.8
Q ss_pred EEEEEecCCCCCCchhhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccCCeEEccCCCcc
Q 040421 100 TFGLIGDLGQTYYSNRTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHEI 175 (407)
Q Consensus 100 ~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~ 175 (407)
|++++||+|... ..++++.+...++|.|+++||++..... .. +....|++.++||||.
T Consensus 1 ~i~~isD~H~~~---~~~~~~~~~~~~~d~ii~~GD~~~~~~~----~~-----------~~~~~~~~~V~GNhD~ 58 (155)
T cd00841 1 KIGVISDTHGSL---ELLEKALELFGDVDLIIHAGDVLYPGPL----NE-----------LELKAPVIAVRGNCDG 58 (155)
T ss_pred CEEEEecCCCCH---HHHHHHHHHhcCCCEEEECCcccccccc----ch-----------hhcCCcEEEEeCCCCC
Confidence 589999999764 3344444432248999999999864221 10 2235699999999997
|
YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph |
| >cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=99.01 E-value=7.6e-08 Score=83.45 Aligned_cols=61 Identities=18% Similarity=0.167 Sum_probs=40.0
Q ss_pred EEEEEecCCCCCCc---hhhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccCCeEEccCCCcc
Q 040421 100 TFGLIGDLGQTYYS---NRTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHEI 175 (407)
Q Consensus 100 ~f~~~gD~~~~~~~---~~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~ 175 (407)
+++++||+|.+... ...+.++.+. .++|.|+|+||++.. ..+ +.++.+ ..|++.|.||||.
T Consensus 1 ~i~viSDtHl~~~~~~~~~~~~~~~~~-~~~d~iih~GDi~~~--------~~~----~~l~~~--~~~~~~V~GN~D~ 64 (178)
T cd07394 1 LVLVIGDLHIPHRASDLPAKFKKLLVP-GKIQHVLCTGNLCSK--------ETY----DYLKTI--APDVHIVRGDFDE 64 (178)
T ss_pred CEEEEEecCCCCCchhhHHHHHHHhcc-CCCCEEEECCCCCCH--------HHH----HHHHhh--CCceEEEECCCCc
Confidence 47899999955432 2234445444 379999999999831 222 233332 2379999999997
|
Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl |
| >TIGR00040 yfcE phosphoesterase, MJ0936 family | Back alignment and domain information |
|---|
Probab=99.00 E-value=9.6e-09 Score=87.53 Aligned_cols=63 Identities=16% Similarity=-0.001 Sum_probs=42.4
Q ss_pred cEEEEEecCCCCCCchhhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccCCeEEccCCCcc
Q 040421 99 YTFGLIGDLGQTYYSNRTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHEI 175 (407)
Q Consensus 99 ~~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~ 175 (407)
+|++++||+|......+.+.+..+...++|.|+++||++. . ...+.++.+ ..|+++|.||||.
T Consensus 1 m~i~viSD~H~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~--------~----~~~~~l~~~--~~~~~~V~GN~D~ 63 (158)
T TIGR00040 1 MKILVISDTHGPLRATELPVELFNLESNVDLVIHAGDLTS--------P----FVLKEFEDL--AAKVIAVRGNNDG 63 (158)
T ss_pred CEEEEEecccCCcchhHhHHHHHhhccCCCEEEEcCCCCC--------H----HHHHHHHHh--CCceEEEccCCCc
Confidence 5899999999765443444444443237999999999971 1 122333332 3589999999996
|
Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required. |
| >COG1768 Predicted phosphohydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.00 E-value=6.7e-09 Score=86.27 Aligned_cols=157 Identities=19% Similarity=0.178 Sum_probs=82.7
Q ss_pred HHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccCCeEEccCCCccccCCCCCCcccccccccccccC
Q 040421 118 THYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHEIDFAPQLGEAIPFKPFANRFHLP 197 (407)
Q Consensus 118 ~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~P 197 (407)
+++......-|.|++.||+..+..... . ..=++++..+.. --+.+.||||+.+. ... ...+ .+|
T Consensus 35 k~W~~~v~~eDiVllpGDiSWaM~l~e---a--~~Dl~~i~~LPG--~K~m~rGNHDYWw~-s~s------kl~n--~lp 98 (230)
T COG1768 35 KHWRSKVSPEDIVLLPGDISWAMRLEE---A--EEDLRFIGDLPG--TKYMIRGNHDYWWS-SIS------KLNN--ALP 98 (230)
T ss_pred HHHHhcCChhhEEEecccchhheechh---h--hhhhhhhhcCCC--cEEEEecCCccccc-hHH------HHHh--hcC
Confidence 344443224489999999998765421 1 111455554422 34779999999542 111 0000 011
Q ss_pred CCCCCCCCCeEEEEecCcEEEEEEe---cc-ccCCCChHH--------HHHHHHhccccCCCCCCeEEEEeeccccccCC
Q 040421 198 YRAPYSTAPFWYSIRRASAHIIVMS---CY-SAFGKYTPQ--------YKWLEKEFPKVNRSETPWLIVLMHCPLYNSYV 265 (407)
Q Consensus 198 ~~~~~~~~~~~ysf~~g~v~fi~Ld---s~-~~~~~~~~Q--------~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~ 265 (407)
..- .. ..-.|.+++..++..- +- .++....+| +.-|+..+.++-++.....|||.|.|+++...
T Consensus 99 ~~l--~~--~n~~f~l~n~aI~G~RgW~s~~~~~e~~te~Deki~~RE~~RLrlsa~a~l~k~~~~fivM~HYPP~s~~~ 174 (230)
T COG1768 99 PIL--FY--LNNGFELLNYAIVGVRGWDSPSFDSEPLTEQDEKIFLREIGRLRLSADAALPKGVSKFIVMTHYPPFSDDG 174 (230)
T ss_pred chH--hh--hccceeEeeEEEEEeecccCCCCCcCccchhHHHHHHHHHHHHHHHHHHhcccCcCeEEEEEecCCCCCCC
Confidence 100 00 0011334444443322 11 112222222 33344322222224455789999999998654
Q ss_pred CCCCCChhHHHHHHHHHHhCCCcEEEecccccccccc
Q 040421 266 HHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAYERSE 302 (407)
Q Consensus 266 ~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~ 302 (407)
.. + .+..++++++|+.++.||.|--.|-.
T Consensus 175 t~---~-----~~sevlee~rv~~~lyGHlHgv~~p~ 203 (230)
T COG1768 175 TP---G-----PFSEVLEEGRVSKCLYGHLHGVPRPN 203 (230)
T ss_pred CC---c-----chHHHHhhcceeeEEeeeccCCCCCC
Confidence 32 1 46678889999999999999877654
|
|
| >cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.97 E-value=2.7e-09 Score=87.55 Aligned_cols=50 Identities=12% Similarity=0.051 Sum_probs=32.9
Q ss_pred EEEEeeccccccCCCCCCCChhHHHHHHHHHHhCCCcEEEecccccccccc
Q 040421 252 LIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAYERSE 302 (407)
Q Consensus 252 ~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~ 302 (407)
.|+++|+|++....... ....-.+.+..++.+++++++|+||.|......
T Consensus 58 ~Ilv~H~pp~~~~~~~~-~~~~g~~~l~~~l~~~~~~~vl~GH~H~~~~~~ 107 (129)
T cd07403 58 DILLTHAPPAGIGDGED-FAHRGFEAFLDFIDRFRPKLFIHGHTHLNYGYQ 107 (129)
T ss_pred CEEEECCCCCcCcCccc-ccccCHHHHHHHHHHHCCcEEEEcCcCCCcCcc
Confidence 57888888764332110 011124567788888999999999999755443
|
TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.97 E-value=2e-09 Score=91.30 Aligned_cols=54 Identities=20% Similarity=0.372 Sum_probs=34.9
Q ss_pred hhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhh---ccCCeEEccCCCccc
Q 040421 120 YELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNA---AYQPWIWTVGNHEID 176 (407)
Q Consensus 120 ~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~---~~~P~~~~~GNHD~~ 176 (407)
+++. .+||+|+++||++..... .....|..+...+..+. ...|+++++||||..
T Consensus 33 ~i~~-~~pd~vv~~GDl~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~ 89 (156)
T cd08165 33 SLWL-LQPDVVFVLGDLFDEGKW--STDEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIG 89 (156)
T ss_pred HHHh-cCCCEEEECCCCCCCCcc--CCHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcC
Confidence 3344 489999999999965321 12244545444333332 247999999999984
|
MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to |
| >cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.97 E-value=1.4e-09 Score=93.65 Aligned_cols=56 Identities=25% Similarity=0.432 Sum_probs=36.1
Q ss_pred HHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhh-------ccCCeEEccCCCccc
Q 040421 118 THYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNA-------AYQPWIWTVGNHEID 176 (407)
Q Consensus 118 ~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~-------~~~P~~~~~GNHD~~ 176 (407)
..+.+. .+||+|+++||++..... .....|.+..+.+..+. ..+|++.++||||..
T Consensus 38 ~~~i~~-~~pd~vi~lGDl~d~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g 100 (171)
T cd07384 38 KTALQR-LKPDVVLFLGDLFDGGRI--ADSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIG 100 (171)
T ss_pred HHHHHh-cCCCEEEEeccccCCcEe--CCHHHHHHHHHHHHHHhcccccccCCceEEEECCccccC
Confidence 344444 499999999999964321 12234554443333332 268999999999985
|
Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit |
| >COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.96 E-value=2.5e-08 Score=86.84 Aligned_cols=179 Identities=15% Similarity=0.139 Sum_probs=104.0
Q ss_pred CcEEEEEecCCCCCCchhhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhh-ccCCeEEccCCCccc
Q 040421 98 PYTFGLIGDLGQTYYSNRTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNA-AYQPWIWTVGNHEID 176 (407)
Q Consensus 98 ~~~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~-~~~P~~~~~GNHD~~ 176 (407)
.+|+++++|.|........+....++ .++|+++.+||++|..-. +...-.+-.. ++.+. ..+|+++++||-|-.
T Consensus 3 ~mkil~vtDlHg~~~~~~k~~~~~~~-~~~D~lviaGDlt~~~~~---~~~~~~~~~~-~e~l~~~~~~v~avpGNcD~~ 77 (226)
T COG2129 3 KMKILAVTDLHGSEDSLKKLLNAAAD-IRADLLVIAGDLTYFHFG---PKEVAEELNK-LEALKELGIPVLAVPGNCDPP 77 (226)
T ss_pred cceEEEEeccccchHHHHHHHHHHhh-ccCCEEEEecceehhhcC---chHHHHhhhH-HHHHHhcCCeEEEEcCCCChH
Confidence 68999999999887655555555555 389999999999933211 1111111100 33333 468999999998863
Q ss_pred cCCCCCCcccccccccccccCCCCCCCCCCeEEEEecCcEEEEEEeccc--cC----CCChHH-HHHHHHhccccCCCCC
Q 040421 177 FAPQLGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRRASAHIIVMSCYS--AF----GKYTPQ-YKWLEKEFPKVNRSET 249 (407)
Q Consensus 177 ~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ysf~~g~v~fi~Lds~~--~~----~~~~~Q-~~WL~~~L~~~~~~~~ 249 (407)
.-. ....+ ..... .+ -+...+++.|+.+-... .+ ...+++ +.-|++-++.++. .
T Consensus 78 ~v~--------~~l~~-~~~~v------~~--~v~~i~~~~~~G~Ggsn~tp~nt~~e~~E~~I~s~l~~~v~~~~~-~- 138 (226)
T COG2129 78 EVI--------DVLKN-AGVNV------HG--RVVEIGGYGFVGFGGSNPTPFNTPREFSEDEIYSKLKSLVKKADN-P- 138 (226)
T ss_pred HHH--------HHHHh-ccccc------cc--ceEEecCcEEEEecccCCCCCCCccccCHHHHHHHHHHHHhcccC-c-
Confidence 110 00000 00000 01 34667787787743211 11 112222 3445555555321 1
Q ss_pred CeEEEEeeccccccCCCCCCCC--hhHHHHHHHHHHhCCCcEEEecccccccccc
Q 040421 250 PWLIVLMHCPLYNSYVHHYMEG--EPMRVLYEPWFVEYKVDVVFAAHVHAYERSE 302 (407)
Q Consensus 250 ~~~iv~~H~P~~~~~~~~~~~~--~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~ 302 (407)
-.|+++|.|||..... ...+ ..-...+..++++.+..+.+|||.|-+.-..
T Consensus 139 -~~Il~~HaPP~gt~~d-~~~g~~hvGS~~vr~~ieefqP~l~i~GHIHEs~G~d 191 (226)
T COG2129 139 -VNILLTHAPPYGTLLD-TPSGYVHVGSKAVRKLIEEFQPLLGLHGHIHESRGID 191 (226)
T ss_pred -ceEEEecCCCCCcccc-CCCCccccchHHHHHHHHHhCCceEEEeeeccccccc
Confidence 1299999999976543 1122 1234577889999999999999999855443
|
|
| >PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A | Back alignment and domain information |
|---|
Probab=98.93 E-value=6.9e-09 Score=90.02 Aligned_cols=179 Identities=15% Similarity=0.129 Sum_probs=87.1
Q ss_pred CcEEEEEecCCCCCCchhhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhh--------------------------
Q 040421 98 PYTFGLIGDLGQTYYSNRTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWD-------------------------- 151 (407)
Q Consensus 98 ~~~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~-------------------------- 151 (407)
.-++++++|.+........+...+++ ..||+|+++||++-... ....|.
T Consensus 5 ~~kilA~s~~~g~~e~l~~l~~~~~e-~~~D~~v~~G~~~~~~a----~~~e~~~a~~~~r~p~k~~i~~e~~~~~e~~~ 79 (255)
T PF14582_consen 5 VRKILAISNFRGDFELLERLVEVIPE-KGPDAVVFVGDLLKAEA----RSDEYERAQEEQREPDKSEINEEECYDSEALD 79 (255)
T ss_dssp --EEEEEE--TT-HHHHHHHHHHHHH-HT-SEEEEES-SS-TCH----HHHHHHHHHHTT----THHHHHHHHHHHHHHH
T ss_pred chhheeecCcchHHHHHHHHHhhccc-cCCCEEEEeccccccch----hhhHHHHHhhhccCcchhhhhhhhhhhHHHHH
Confidence 34789999988765444445455555 38999999999984321 123444
Q ss_pred HHHHHHhhhhccCCeEEccCCCccccCCCCCCcccccccccccccCCCCCCCCCCeEEEEecCcEEEEEEecccc-CC--
Q 040421 152 TWGRFIERNAAYQPWIWTVGNHEIDFAPQLGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRRASAHIIVMSCYSA-FG-- 228 (407)
Q Consensus 152 ~~~~~~~~~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ysf~~g~v~fi~Lds~~~-~~-- 228 (407)
.|++.+.. ..+|.+++|||||....-... .+|....-.|.-- .. ...+.+.-|...++.+-..-. ..
T Consensus 80 ~ff~~L~~--~~~p~~~vPG~~Dap~~~~lr-----~a~~~e~v~p~~~--~v-H~sf~~~~g~y~v~G~GGeI~~~~~~ 149 (255)
T PF14582_consen 80 KFFRILGE--LGVPVFVVPGNMDAPERFFLR-----EAYNAEIVTPHIH--NV-HESFFFWKGEYLVAGMGGEITDDQRE 149 (255)
T ss_dssp HHHHHHHC--C-SEEEEE--TTS-SHHHHHH-----HHHHCCCC-TTEE--E--CTCEEEETTTEEEEEE-SEEESSS-B
T ss_pred HHHHHHHh--cCCcEEEecCCCCchHHHHHH-----HHhccceecccee--ee-eeeecccCCcEEEEecCccccCCCcc
Confidence 44444443 368999999999973100000 0111111111100 00 012333345577777655311 00
Q ss_pred ------CChHHHHHHHHhccccCCCCCCeEEEEeeccc-cccCCCCCCCChhHHHHHHHHHHhCCCcEEEeccccccc
Q 040421 229 ------KYTPQYKWLEKEFPKVNRSETPWLIVLMHCPL-YNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAYE 299 (407)
Q Consensus 229 ------~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~-~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~ 299 (407)
.......|..+.|..++ ..-+|+++|.|+ +..+..+. -.+.+..++++++.++||+||.|--.
T Consensus 150 ~~~~LrYP~weaey~lk~l~elk---~~r~IlLfhtpPd~~kg~~h~-----GS~~V~dlIk~~~P~ivl~Ghihe~~ 219 (255)
T PF14582_consen 150 EEFKLRYPAWEAEYSLKFLRELK---DYRKILLFHTPPDLHKGLIHV-----GSAAVRDLIKTYNPDIVLCGHIHESH 219 (255)
T ss_dssp CSSS-EEEHHHHHHHHGGGGGCT---SSEEEEEESS-BTBCTCTBTT-----SBHHHHHHHHHH--SEEEE-SSS-EE
T ss_pred ccccccchHHHHHHHHHHHHhcc---cccEEEEEecCCccCCCcccc-----cHHHHHHHHHhcCCcEEEecccccch
Confidence 01234556667777642 235677799999 44332221 22467789999999999999999654
|
|
| >TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase | Back alignment and domain information |
|---|
Probab=98.90 E-value=2.4e-08 Score=90.56 Aligned_cols=75 Identities=17% Similarity=0.057 Sum_probs=46.0
Q ss_pred EEEecCCCCCCch----hhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhc-cCCeEEccCCCccc
Q 040421 102 GLIGDLGQTYYSN----RTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAA-YQPWIWTVGNHEID 176 (407)
Q Consensus 102 ~~~gD~~~~~~~~----~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~-~~P~~~~~GNHD~~ 176 (407)
++++|+|.+.... ..++.+.+...+||+|+++||++..--.........+.+.+.++.+.. ..|+++++||||+.
T Consensus 2 ~~iSDlHl~~~~~~~~~~~l~~l~~~~~~~d~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L~~~~~~v~~v~GNHD~~ 81 (231)
T TIGR01854 2 LFISDLHLSPERPDITALFLDFLREEARKADALYILGDLFEAWIGDDDPSTLARSVAQAIRQVSDQGVPCYFMHGNRDFL 81 (231)
T ss_pred eEEEecCCCCCChhHHHHHHHHHHhhhccCCEEEEcCceeccccCCCCCCHHHHHHHHHHHHHHHCCCeEEEEcCCCchh
Confidence 5799999875322 233444433237999999999995210000011222344556666654 48999999999984
|
This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown. |
| >TIGR00583 mre11 DNA repair protein (mre11) | Back alignment and domain information |
|---|
Probab=98.88 E-value=1.6e-07 Score=91.30 Aligned_cols=44 Identities=16% Similarity=0.035 Sum_probs=30.5
Q ss_pred CCcEEEEEecCCCCCCc---------hhhHHHhh---hCCCCCceEEEcCCccccCC
Q 040421 97 VPYTFGLIGDLGQTYYS---------NRTLTHYE---LNPIKGQTVLFVGDLSYADD 141 (407)
Q Consensus 97 ~~~~f~~~gD~~~~~~~---------~~~l~~~~---~~~~~~d~vl~~GD~~y~~~ 141 (407)
..+||++++|+|.+... ..++.+++ .. .++|+||++||++....
T Consensus 2 ~~mKIlh~SD~HlG~~~~~~~r~~D~~~~f~eil~~a~~-~~vD~VLiaGDLFd~~~ 57 (405)
T TIGR00583 2 DTIRILVSTDNHVGYGENDPVRGDDSWNTFEEVLQIAKE-QDVDMILLGGDLFHENK 57 (405)
T ss_pred CceEEEEEcCCCCCCccCCchhhhhHHHHHHHHHHHHHH-cCCCEEEECCccCCCCC
Confidence 46899999999987421 22333322 22 38999999999997643
|
All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria. |
| >PRK09453 phosphodiesterase; Provisional | Back alignment and domain information |
|---|
Probab=98.78 E-value=3.7e-07 Score=79.63 Aligned_cols=74 Identities=9% Similarity=0.030 Sum_probs=44.1
Q ss_pred cEEEEEecCCCCCCchhhHHHhhhCCCCCceEEEcCCccccCCCCCCC--chhhhHHHHHHhhhhccCCeEEccCCCccc
Q 040421 99 YTFGLIGDLGQTYYSNRTLTHYELNPIKGQTVLFVGDLSYADDYPFHD--NNRWDTWGRFIERNAAYQPWIWTVGNHEID 176 (407)
Q Consensus 99 ~~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~--~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~ 176 (407)
+|++++||+|......+.+.+..+. .++|.|+++||++..... ... ....++..+.++.+ ..|++++.||||..
T Consensus 1 mri~viSD~Hg~~~~~~~~l~~~~~-~~~d~ii~lGDi~~~~~~-~~~~~~~~~~~~~~~l~~~--~~~v~~V~GNhD~~ 76 (182)
T PRK09453 1 MKLMFASDTHGSLPATEKALELFAQ-SGADWLVHLGDVLYHGPR-NPLPEGYAPKKVAELLNAY--ADKIIAVRGNCDSE 76 (182)
T ss_pred CeEEEEEeccCCHHHHHHHHHHHHh-cCCCEEEEcccccccCcC-CCCccccCHHHHHHHHHhc--CCceEEEccCCcch
Confidence 5899999999654322333333333 389999999999853211 000 00122333334332 35899999999973
|
|
| >cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.74 E-value=7.7e-08 Score=88.55 Aligned_cols=175 Identities=14% Similarity=0.085 Sum_probs=86.3
Q ss_pred cEEEEEecCCCCC------Cchhh----HHHhhhCCCCCc-eEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccCCeE
Q 040421 99 YTFGLIGDLGQTY------YSNRT----LTHYELNPIKGQ-TVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWI 167 (407)
Q Consensus 99 ~~f~~~gD~~~~~------~~~~~----l~~~~~~~~~~d-~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P~~ 167 (407)
++|+.++|+|... ..... ++++.++ ++| +++.+||++...... +........+.++. .-.-+
T Consensus 1 l~i~~~sD~hg~~~~~~~~~g~~~l~~~v~~~~~~--~~~~l~v~~GD~~~~~~~~--~~~~~~~~~~~l~~---~g~d~ 73 (252)
T cd00845 1 LTILHTNDLHGHFEPAGGVGGAARLATLIKEERAE--NENTLLLDAGDNFDGSPPS--TATKGEANIELMNA---LGYDA 73 (252)
T ss_pred CEEEEecccccCccccCCcCCHHHHHHHHHHHHhc--CCCeEEEeCCccCCCccch--hccCCcHHHHHHHh---cCCCE
Confidence 5899999999553 22222 3344443 566 789999999654321 11112223333333 23556
Q ss_pred EccCCCccccCCCCCCcccccccccccccC-------CCC---CCCCCCeEEEEecCcE--EEEEEeccccCC-------
Q 040421 168 WTVGNHEIDFAPQLGEAIPFKPFANRFHLP-------YRA---PYSTAPFWYSIRRASA--HIIVMSCYSAFG------- 228 (407)
Q Consensus 168 ~~~GNHD~~~~~~~~~~~~~~~~~~~f~~P-------~~~---~~~~~~~~ysf~~g~v--~fi~Lds~~~~~------- 228 (407)
+++||||+..... .+.........| ..+ .......|-.++.+++ -|+.+.+.....
T Consensus 74 ~~~GNHe~d~g~~-----~l~~~~~~~~~~~l~aNv~~~~~~~~~~~~~~~~i~~~~g~kIgiiG~~~~~~~~~~~~~~~ 148 (252)
T cd00845 74 VTIGNHEFDYGLD-----ALAELYKDANFPVLSANLYDKDTGTGPPWAKPYKIIEVDGVKIGVIGLTTPDTPTYTPLGWI 148 (252)
T ss_pred EeeccccccccHH-----HHHHHHHhCCCCEEEEeeeccCCCCCCCCcCCeEEEEECCEEEEEEEeccccceeecCCCcc
Confidence 7889999853211 011111111111 000 0001123455677775 455554421100
Q ss_pred ---CChHHHHHHHHhccccCCCCCCeEEEEeeccccccCCCCCCCChhHHHHHHHHHHhCCCcEEEecccccccc
Q 040421 229 ---KYTPQYKWLEKEFPKVNRSETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAYER 300 (407)
Q Consensus 229 ---~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r 300 (407)
......+.+++..+. .+.+...+|++.|.|... ...+...+ .+||++|+||.|..+.
T Consensus 149 ~~~~~~~~~~~~~~~~~~-~~~~~D~vIvl~H~g~~~------------~~~la~~~--~giDlvlggH~H~~~~ 208 (252)
T cd00845 149 IGLPFEDLAEAVAVAEEL-LAEGADVIILLSHLGLDD------------DEELAEEV--PGIDVILGGHTHHLLE 208 (252)
T ss_pred cCceecCHHHHHHHHHHH-HhCCCCEEEEEeccCccc------------hHHHHhcC--CCccEEEcCCcCcccC
Confidence 001122333321121 124667899999987532 01222112 5899999999998654
|
This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich |
| >KOG3770 consensus Acid sphingomyelinase and PHM5 phosphate metabolism protein [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.73 E-value=5.8e-08 Score=95.55 Aligned_cols=179 Identities=17% Similarity=0.240 Sum_probs=99.7
Q ss_pred hhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhh---hHHHHHHhhhhccCCeEEccCCCccccCCCCCCc--cc---
Q 040421 115 RTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRW---DTWGRFIERNAAYQPWIWTVGNHEIDFAPQLGEA--IP--- 186 (407)
Q Consensus 115 ~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~---~~~~~~~~~~~~~~P~~~~~GNHD~~~~~~~~~~--~~--- 186 (407)
.+|.++.++..++|+|+++||++--+.+....+... ....+.+......+|+|+++||||.-....+... ..
T Consensus 199 s~L~~ike~~~~iD~I~wTGD~~~H~~w~~t~~~~l~~~~~l~~~~~e~FpdvpvypalGNhe~~P~N~F~~~~~~~~~~ 278 (577)
T KOG3770|consen 199 SALDHIKENHKDIDYIIWTGDNVAHDVWAQTEEENLSMLSRLTSLLSEYFPDVPVYPALGNHEIHPVNLFAPGSVPKRHS 278 (577)
T ss_pred HHHHHHHhcCCCCCEEEEeCCCCcccchhhhHHHHHHHHHHHHHHHHHhCCCCceeeecccCCCCcHhhcCCCCCcchhh
Confidence 345566666445999999999995543221111111 1123334455568999999999998532111100 00
Q ss_pred ----ccccccccc--cCCCC-CCCCCCeEEEEe-cCcEEEEEEeccccC----------CCChHHHHHHHHhccccCCCC
Q 040421 187 ----FKPFANRFH--LPYRA-PYSTAPFWYSIR-RASAHIIVMSCYSAF----------GKYTPQYKWLEKEFPKVNRSE 248 (407)
Q Consensus 187 ----~~~~~~~f~--~P~~~-~~~~~~~~ysf~-~g~v~fi~Lds~~~~----------~~~~~Q~~WL~~~L~~~~~~~ 248 (407)
|..+...|. +|... .....+.+|.-. +++.++|+||+..-+ ..-..|++|+..+|.+++ ++
T Consensus 279 ~~wly~~~~~~W~~wlp~e~~~t~~kga~Y~~~~~~Glr~IslNt~~c~~~N~~L~~n~tdp~~~lqWf~~~L~~ae-~~ 357 (577)
T KOG3770|consen 279 QLWLYKHLAGAWSTWLPAEAKETFLKGAYYLVLVIDGLRLISLNTNYCSAPNFWLYANQTDPIDQLQWFVDQLQEAE-SA 357 (577)
T ss_pred hhHHHHHHHhhhhccCCHHHHhhhhcCcEEEEeecCCceEEEeccccccccceeeeecCCCchHHhhHHHHHHHHHH-hc
Confidence 011111111 23221 112234566543 588999999995321 224678999999999875 34
Q ss_pred CCeEEEEeeccccccCCCCCCCChhHHHHHHHHHHhCC--CcEEEeccccccc
Q 040421 249 TPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYK--VDVVFAAHVHAYE 299 (407)
Q Consensus 249 ~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~--vdlvl~GH~H~y~ 299 (407)
..-+=+++|.|+-... +..+ -...+-.++.++. +...|.||.|.=+
T Consensus 358 GekVhil~HIPpG~~~---c~~~--ws~~f~~iv~r~~~tI~gqf~GH~h~d~ 405 (577)
T KOG3770|consen 358 GEKVHILGHIPPGDGV---CLEG--WSINFYRIVNRFRSTIAGQFYGHTHIDE 405 (577)
T ss_pred CCEEEEEEeeCCCCcc---hhhh--hhHHHHHHHHHHHHhhhhhccccCccee
Confidence 4457788999974311 1111 1223444555552 4467999999644
|
|
| >cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.68 E-value=6e-08 Score=84.05 Aligned_cols=56 Identities=23% Similarity=0.459 Sum_probs=34.7
Q ss_pred HHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHH-HHHHhhhh-------------------ccCCeEEccCCCcccc
Q 040421 118 THYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTW-GRFIERNA-------------------AYQPWIWTVGNHEIDF 177 (407)
Q Consensus 118 ~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~-~~~~~~~~-------------------~~~P~~~~~GNHD~~~ 177 (407)
+.+... .+||.|+++||++.. ++. .+.+|... .++.+-+. ..+|++.++||||..+
T Consensus 37 ~~~~~~-l~Pd~V~fLGDLfd~-~w~--~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~i~V~GNHDIG~ 112 (193)
T cd08164 37 SMMQFW-LKPDAVVVLGDLFSS-QWI--DDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPLINIAGNHDVGY 112 (193)
T ss_pred HHHHHh-cCCCEEEEeccccCC-Ccc--cHHHHHHHHHHHHHHhcCCcccccccccccccccccCCceEEEECCcccCCC
Confidence 334444 499999999999954 432 23445332 22222111 1389999999999964
|
Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the |
| >cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.64 E-value=7.4e-08 Score=86.48 Aligned_cols=182 Identities=12% Similarity=-0.005 Sum_probs=87.4
Q ss_pred EEEecCCCCCCchh---hHHHhhhCC--CCCceEEEcCCccccCCCCCCC-chhhhH-HHHHHhhhhccCCeEEccCCCc
Q 040421 102 GLIGDLGQTYYSNR---TLTHYELNP--IKGQTVLFVGDLSYADDYPFHD-NNRWDT-WGRFIERNAAYQPWIWTVGNHE 174 (407)
Q Consensus 102 ~~~gD~~~~~~~~~---~l~~~~~~~--~~~d~vl~~GD~~y~~~~~~~~-~~~~~~-~~~~~~~~~~~~P~~~~~GNHD 174 (407)
++++|.|.+..... .+....+.. .++|.++++||++..-...... ...... +...++......+++.++||||
T Consensus 1 ~~iSDlHlg~~~~~~~~~~~~~~~~~~~~~~~~lvl~GDi~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~v~GNHD 80 (217)
T cd07398 1 LFISDLHLGDGGPAADFLLLFLLAALALGEADALYLLGDIFDLWFGDDEVVPPAAHEVLAALLRLADRGTRVYYVPGNHD 80 (217)
T ss_pred CEeeeecCCCCCCCHHHHHHHHHhhhccCCCCEEEEeccEEEEEecCCCCCChHHHHHHHHHHHHHHCCCeEEEECCCch
Confidence 36899998764322 122222221 3899999999999532110000 111111 2334444456789999999999
Q ss_pred cccCCCCCCcccccccccccccCCCCCCCCCCeEEEEecCcEEEEEEeccccCCCChHHHHHHHHhccccCCCCCCeEEE
Q 040421 175 IDFAPQLGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRRASAHIIVMSCYSAFGKYTPQYKWLEKEFPKVNRSETPWLIV 254 (407)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ysf~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv 254 (407)
..... .+........ .......+.+++.+++++-... +........|+...+.... ..+.++
T Consensus 81 ~~~~~---------~~~~~~~~~~-----~~~~~~~~~~~g~~~~~~HG~~-~d~~~~~~~~~~~~~~~~~---~~~~~~ 142 (217)
T cd07398 81 FLLGD---------FFAEELGLIL-----LPDPLVHLELDGKRILLEHGDQ-FDTDDRAYQLLRRLGRNPY---DQLLFL 142 (217)
T ss_pred HHHHh---------HHHHHcCCEE-----eccceEEEeeCCeEEEEECCCc-CchhHHHHHHHHHHhCcHH---HHHHHh
Confidence 85210 0111100000 0011114667788888876532 2333444445544332200 000000
Q ss_pred Eeeccc---------cc----cCCCC--CCCChhHHHHHHHHHHhCCCcEEEeccccccccc
Q 040421 255 LMHCPL---------YN----SYVHH--YMEGEPMRVLYEPWFVEYKVDVVFAAHVHAYERS 301 (407)
Q Consensus 255 ~~H~P~---------~~----~~~~~--~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~ 301 (407)
..+.+. .. ..... ........+.+..++++++++++++||+|.....
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GH~H~~~~~ 204 (217)
T cd07398 143 NRPLNRRRGIAGGLRWSSRYLKKKVKKAVAIIDVFEEAVARLARRKGVDGVICGHTHRPALH 204 (217)
T ss_pred cchHHHHHHHHHhhhhhhHHHHhCccchHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCCeE
Confidence 000000 00 00000 0011223455667778899999999999986544
|
YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l |
| >cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.61 E-value=5.1e-07 Score=83.27 Aligned_cols=174 Identities=17% Similarity=0.188 Sum_probs=85.1
Q ss_pred cEEEEEecCCCCC-------CchhhH----HHhhhCCCCCc-eEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccCCe
Q 040421 99 YTFGLIGDLGQTY-------YSNRTL----THYELNPIKGQ-TVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPW 166 (407)
Q Consensus 99 ~~f~~~gD~~~~~-------~~~~~l----~~~~~~~~~~d-~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 166 (407)
++|+.+.|+|.-. .....+ +++.++ +++ ++|.+||++...... .....+...+.++.+ -.-
T Consensus 1 ~~il~~nd~~~~~~~~~~~~gG~~rl~~~i~~~r~~--~~~~l~l~~GD~~~g~~~~--~~~~g~~~~~~l~~l---~~d 73 (257)
T cd07406 1 FTILHFNDVYEIAPLDGGPVGGAARFATLRKQLRKE--NPNTLVLFSGDVLSPSLLS--TATKGKQMVPVLNAL---GVD 73 (257)
T ss_pred CeEEEEccceeecccCCCCcCCHHHHHHHHHHHHhc--CCCEEEEECCCccCCccch--hhcCCccHHHHHHhc---CCc
Confidence 4778888887311 112233 333333 566 999999999543211 111122333444433 133
Q ss_pred EEccCCCccccCCCCCCcccccccccccccC---------CC-CCCCCCCeEEEEecCcE--EEEEEeccccC------C
Q 040421 167 IWTVGNHEIDFAPQLGEAIPFKPFANRFHLP---------YR-APYSTAPFWYSIRRASA--HIIVMSCYSAF------G 228 (407)
Q Consensus 167 ~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~P---------~~-~~~~~~~~~ysf~~g~v--~fi~Lds~~~~------~ 228 (407)
+.++||||+..... .+.........| .. ..-..-+.|.-++.+++ -|+.+.+.... .
T Consensus 74 ~~~~GNHefd~g~~-----~l~~~~~~~~~~~L~aNi~~~~~~~~~~~~~~~~i~~~~g~kIgviG~~~~~~~~~~~~~~ 148 (257)
T cd07406 74 LACFGNHEFDFGED-----QLQKRLGESKFPWLSSNVFDATGGGPLPNGKESAIIERAGVKIGLLGLVEEEWLETLTIDP 148 (257)
T ss_pred EEeecccccccCHH-----HHHHHHhhCCCCEEEEEEEECCCCcccCCCCCeEEEEECCeEEEEEEEecccccccccCCC
Confidence 66899999953211 001000000000 00 00001245677788885 45555543211 0
Q ss_pred ---CChHHHHHHHHhccccCCCCCCeEEEEeeccccccCCCCCCCChhHHHHHHHHHHh-CCCcEEEeccccccc
Q 040421 229 ---KYTPQYKWLEKEFPKVNRSETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVE-YKVDVVFAAHVHAYE 299 (407)
Q Consensus 229 ---~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~-~~vdlvl~GH~H~y~ 299 (407)
....-.+.+++.++...+.++..+|++.|.+... .. .+.++ .+||++|+||.|..+
T Consensus 149 ~~~~~~d~~~~~~~~v~~~~~~~~D~iVvl~H~g~~~--------d~-------~la~~~~~iD~IlgGH~H~~~ 208 (257)
T cd07406 149 EYVRYRDYVETARELVDELREQGADLIIALTHMRLPN--------DK-------RLAREVPEIDLILGGHDHEYI 208 (257)
T ss_pred CcceEcCHHHHHHHHHHHHHhCCCCEEEEEeccCchh--------hH-------HHHHhCCCCceEEecccceeE
Confidence 0112223333333222225678999999987421 11 22333 479999999999866
|
CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th |
| >cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.57 E-value=1.2e-06 Score=81.73 Aligned_cols=59 Identities=17% Similarity=0.129 Sum_probs=35.0
Q ss_pred HHHHHHhccccCCCCCCeEEEEeeccccccCCCCCCCChhHHHHHHHHHHh-CCCcEEEeccccccc
Q 040421 234 YKWLEKEFPKVNRSETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVE-YKVDVVFAAHVHAYE 299 (407)
Q Consensus 234 ~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~-~~vdlvl~GH~H~y~ 299 (407)
.++..++|++ .++..+|+++|.+....... ....+. ....|.++ .+||++|+||.|...
T Consensus 172 ~~~~v~~lr~---~~~D~IIvl~H~g~~~~~~~-~~~~~~---~~~~la~~~~~vD~IlgGHsH~~~ 231 (277)
T cd07410 172 AKKYVPKLRA---EGADVVVVLAHGGFERDLEE-SLTGEN---AAYELAEEVPGIDAILTGHQHRRF 231 (277)
T ss_pred HHHHHHHHHH---cCCCEEEEEecCCcCCCccc-ccCCcc---HHHHHHhcCCCCcEEEeCCCcccc
Confidence 4455555554 46779999999986543210 011111 12234444 589999999999754
|
CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos |
| >cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.52 E-value=1.7e-06 Score=79.37 Aligned_cols=183 Identities=17% Similarity=0.146 Sum_probs=96.7
Q ss_pred EEEEecCCCCCCch-hhHHHhhhC-CCCCceEEEcCCccccCCCCCCCc---------hhhhHHHHHHhhhh-ccCCeEE
Q 040421 101 FGLIGDLGQTYYSN-RTLTHYELN-PIKGQTVLFVGDLSYADDYPFHDN---------NRWDTWGRFIERNA-AYQPWIW 168 (407)
Q Consensus 101 f~~~gD~~~~~~~~-~~l~~~~~~-~~~~d~vl~~GD~~y~~~~~~~~~---------~~~~~~~~~~~~~~-~~~P~~~ 168 (407)
|++.||.|...... ..+..+.+. ..++|++|++||+..... ..+. ..+..|.+.++... ..+|+++
T Consensus 1 i~v~Gd~HG~~~~~~~~~~~~~~~~~~~~D~lI~~GDf~~~~~--~~d~~~~~~p~k~~~~~~f~~~~~g~~~~p~~t~f 78 (262)
T cd00844 1 IAVEGCCHGELDKIYETLEKIEKKEGTKVDLLICCGDFQAVRN--EADLKCMAVPPKYRKMGDFYKYYSGEKKAPILTIF 78 (262)
T ss_pred CEEEecCCccHHHHHHHHHHHHHhcCCCCcEEEEcCCCCCcCC--cchhhhhccchhhhhhhhHHHHhcCCccCCeeEEE
Confidence 57899999853221 223333322 137999999999953221 1110 12334444444332 4678899
Q ss_pred ccCCCccccCCCCCCcccccccccccccCCCCCCCCCCeE-----EEEecCcEEEEEEeccc---cCC--------CChH
Q 040421 169 TVGNHEIDFAPQLGEAIPFKPFANRFHLPYRAPYSTAPFW-----YSIRRASAHIIVMSCYS---AFG--------KYTP 232 (407)
Q Consensus 169 ~~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~-----ysf~~g~v~fi~Lds~~---~~~--------~~~~ 232 (407)
+.||||... .+. .++..+ -...+.+ ..+++++++|..|.... ++. ..+.
T Consensus 79 i~GNHE~~~-----------~l~---~l~~gg-~v~~Ni~~Lg~~~v~~~~GlrIaGLsG~~~~~~~~~~~~~~~~~t~~ 143 (262)
T cd00844 79 IGGNHEASN-----------YLW---ELPYGG-WVAPNIYYLGYAGVVNFGGLRIAGLSGIYKSHDYRKGHFERPPYSED 143 (262)
T ss_pred ECCCCCCHH-----------HHH---hhcCCC-eecCcEEEecCCCEEEECCeEEEEecccccccccccccccCCCCCHH
Confidence 999999621 010 011100 0001122 23556889999987622 111 1122
Q ss_pred HHHHH-------HHhccccCCCCCCeEEEEeeccccccCCCCCCC---------------ChhHHHHHHHHHHhCCCcEE
Q 040421 233 QYKWL-------EKEFPKVNRSETPWLIVLMHCPLYNSYVHHYME---------------GEPMRVLYEPWFVEYKVDVV 290 (407)
Q Consensus 233 Q~~WL-------~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~---------------~~~~~~~l~~l~~~~~vdlv 290 (407)
++..+ .+.|... ...--|+++|.|+.......... +..-...+..++++.+...+
T Consensus 144 ~~rs~y~~r~~~~~kl~~~---~~~vDIlLSHdWP~gI~~~~~~~~l~~~~~~~~~~~~~~~~Gs~~~~~ll~~lkPryh 220 (262)
T cd00844 144 TKRSAYHVRNIEVFKLKQL---KQPIDIFLSHDWPRGIYKHGDKKQLLRKKPFFRQDIESGTLGSPAAEELLKHLKPRYW 220 (262)
T ss_pred HHHHhhhhhHHHHHHHHhc---CCCCcEEEeCCCCcchhhccchHHhhhcCccchhcccccCCCCHHHHHHHHHhCCCEE
Confidence 33221 0112211 11235899999987654321100 01122457789999999999
Q ss_pred Eeccccc-cccccc
Q 040421 291 FAAHVHA-YERSER 303 (407)
Q Consensus 291 l~GH~H~-y~r~~~ 303 (407)
|+||.|. |++..|
T Consensus 221 f~gH~H~~f~~~~~ 234 (262)
T cd00844 221 FSAHLHVKFAALVP 234 (262)
T ss_pred EEecCCcccceecC
Confidence 9999998 776654
|
Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s |
| >COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=98.47 E-value=5e-07 Score=88.63 Aligned_cols=73 Identities=19% Similarity=0.119 Sum_probs=49.9
Q ss_pred cEEEEEecCCCCCC---c-------hh----hHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhh-cc
Q 040421 99 YTFGLIGDLGQTYY---S-------NR----TLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNA-AY 163 (407)
Q Consensus 99 ~~f~~~gD~~~~~~---~-------~~----~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~-~~ 163 (407)
+||+.++|+|.+.. . .. .+..+.++ ++||||++||+...... ....-..+.++++.+. ..
T Consensus 1 mkilHtSD~HLG~~~~~~~~r~~d~~~~f~~~l~~a~~~--~vD~vliAGDlFd~~~P---s~~a~~~~~~~l~~l~~~~ 75 (390)
T COG0420 1 MKILHTSDWHLGSKQLNLPSRLEDQKKAFDELLEIAKEE--KVDFVLIAGDLFDTNNP---SPRALKLFLEALRRLKDAG 75 (390)
T ss_pred CeeEEecccccchhhccCccchHHHHHHHHHHHHHHHHc--cCCEEEEccccccCCCC---CHHHHHHHHHHHHHhccCC
Confidence 58999999999821 1 11 22333343 88999999999976432 2233344566666554 47
Q ss_pred CCeEEccCCCccc
Q 040421 164 QPWIWTVGNHEID 176 (407)
Q Consensus 164 ~P~~~~~GNHD~~ 176 (407)
+|++++.||||..
T Consensus 76 Ipv~~I~GNHD~~ 88 (390)
T COG0420 76 IPVVVIAGNHDSP 88 (390)
T ss_pred CcEEEecCCCCch
Confidence 9999999999985
|
|
| >COG0622 Predicted phosphoesterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.41 E-value=1.7e-05 Score=67.85 Aligned_cols=64 Identities=16% Similarity=-0.007 Sum_probs=41.9
Q ss_pred cEEEEEecCCCCCCchhhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccCCeEEccCCCccc
Q 040421 99 YTFGLIGDLGQTYYSNRTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHEID 176 (407)
Q Consensus 99 ~~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~ 176 (407)
++++++||+|..........++... .++|+|||+||.+.... ...+... -..++++|.||.|..
T Consensus 2 m~ilviSDtH~~~~~~~~~~~~~~~-~~~d~vih~GD~~~~~~--------~~~l~~~-----~~~~i~~V~GN~D~~ 65 (172)
T COG0622 2 MKILVISDTHGPLRAIEKALKIFNL-EKVDAVIHAGDSTSPFT--------LDALEGG-----LAAKLIAVRGNCDGE 65 (172)
T ss_pred cEEEEEeccCCChhhhhHHHHHhhh-cCCCEEEECCCcCCccc--------hHHhhcc-----cccceEEEEccCCCc
Confidence 6899999999876422222223332 48999999999995422 1111111 135899999999984
|
|
| >cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.31 E-value=5e-06 Score=76.71 Aligned_cols=181 Identities=13% Similarity=0.104 Sum_probs=86.2
Q ss_pred cEEEEEecCCCCCC-------chhhHHHhhhCC--CCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccCCeEEc
Q 040421 99 YTFGLIGDLGQTYY-------SNRTLTHYELNP--IKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWT 169 (407)
Q Consensus 99 ~~f~~~gD~~~~~~-------~~~~l~~~~~~~--~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~ 169 (407)
++|+.++|+|.... ....+..++++. .+++++|.+||++...... .........+.+..+ ... +.+
T Consensus 1 i~il~~~D~H~~~~~~~~~~~g~~~l~~~i~~~~~~~~~l~l~~GD~~~gs~~~--~~~~g~~~~~~ln~~--g~d-~~~ 75 (257)
T cd07408 1 ITILHTNDIHGRIDEDDNNGIGYAKLATYKKEMNKLDNDLLVDAGDAIQGLPIS--DLDKGETIIKIMNAV--GYD-AVT 75 (257)
T ss_pred CEEEEeccCcccccCCCCccccHHHHHHHHHHHHhcCCEEEEeCCCcCCCchhh--hhcCCcHHHHHHHhc--CCc-EEc
Confidence 57899999996421 122333322211 1568999999998543211 111112233333332 223 457
Q ss_pred cCCCccccCCCCCCcccccccccccccCCC---------CCCCCCCeEEEEecC-c--EEEEEEecccc--CC--C----
Q 040421 170 VGNHEIDFAPQLGEAIPFKPFANRFHLPYR---------APYSTAPFWYSIRRA-S--AHIIVMSCYSA--FG--K---- 229 (407)
Q Consensus 170 ~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~---------~~~~~~~~~ysf~~g-~--v~fi~Lds~~~--~~--~---- 229 (407)
+||||+.+... .+....+.+.+|.- +.... ..|.-++.+ + +-||.+-+... .. .
T Consensus 76 ~GNHefd~G~~-----~l~~~~~~~~~~~l~aNv~~~~~~~~~~-~py~i~~~~~G~kIgviG~~~~~~~~~~~~~~~~~ 149 (257)
T cd07408 76 PGNHEFDYGLD-----RLKELSKEADFPFLSANVYDNDTGKRVF-KPYKIKELGNGVKVGVIGLTTPETATKTHPKNVKD 149 (257)
T ss_pred cccccccCCHH-----HHHHHHhhCCCCEEEEEEEEcCCCCccc-CCEEEEEcCCCCEEEEEeecCcCcccccCccccCC
Confidence 89999964211 01111111111111 10011 224445666 5 55666654311 00 0
Q ss_pred --ChHHHHHHH----HhccccCCCCCCeEEEEeeccccccCCCCCCCChhHHHHHHHHHHhCCCcEEEeccccccccc
Q 040421 230 --YTPQYKWLE----KEFPKVNRSETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAYERS 301 (407)
Q Consensus 230 --~~~Q~~WL~----~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~ 301 (407)
...-.+-++ ..|++ .++..+|++.|.+....... . ....+.. .-.+||++|.||.|.....
T Consensus 150 ~~~~d~~~~~~~~~v~~l~~---~~~D~iIvl~H~G~~~~~~~----~--~~~~la~--~~~giDvIigGH~H~~~~~ 216 (257)
T cd07408 150 VTFEDPIEEAKKVIVAALKA---KGADVIVALGHLGVDRTSSP----W--TSTELAA--NVTGIDLIIDGHSHTTIEI 216 (257)
T ss_pred cEEecHHHHHHHHHHHHHHh---CCCCEEEEEeCcCcCCCCCC----c--cHHHHHH--hCCCceEEEeCCCcccccC
Confidence 011122232 33332 46779999999886543110 0 1112222 1248999999999986543
|
SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet |
| >cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.31 E-value=2.8e-05 Score=71.01 Aligned_cols=170 Identities=15% Similarity=0.147 Sum_probs=86.3
Q ss_pred EEEEEecCCCCCCc---hhhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccCCeEEccCCCccc
Q 040421 100 TFGLIGDLGQTYYS---NRTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHEID 176 (407)
Q Consensus 100 ~f~~~gD~~~~~~~---~~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~ 176 (407)
||+++||.=..... ...|.++.++ .++||++..||++.... .-. ....+.+..+ .+- ..++|||++.
T Consensus 1 ~ilfigdi~g~~G~~~~~~~l~~lk~~-~~~D~vi~NgEn~~gg~--gl~----~~~~~~L~~~--G~D-~iTlGNH~fD 70 (255)
T cd07382 1 KILFIGDIVGKPGRKAVKEHLPKLKKE-YKIDFVIANGENAAGGK--GIT----PKIAKELLSA--GVD-VITMGNHTWD 70 (255)
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHHHHH-CCCCEEEECCccccCCC--CCC----HHHHHHHHhc--CCC-EEEecccccC
Confidence 58899998544322 2334455544 37899999999986421 111 2223333322 223 4577999996
Q ss_pred cCCCCCCccccccccccc---ccCCCCC-CCCCCeEEEEecCcEEEEEEecccc--CCCChHHHHHHHHhccccCCCCCC
Q 040421 177 FAPQLGEAIPFKPFANRF---HLPYRAP-YSTAPFWYSIRRASAHIIVMSCYSA--FGKYTPQYKWLEKEFPKVNRSETP 250 (407)
Q Consensus 177 ~~~~~~~~~~~~~~~~~f---~~P~~~~-~~~~~~~ysf~~g~v~fi~Lds~~~--~~~~~~Q~~WL~~~L~~~~~~~~~ 250 (407)
.. +. ..+.+.. -.|.|-+ ......|.-++.+++++-+++-... ......-++-+++.+++.. .+.+
T Consensus 71 ~g----el---~~~l~~~~~~l~~aN~~~~~pg~~~~i~~~~G~kIaVigl~g~~~~~~~~~P~~~~~~~v~~lk-~~~D 142 (255)
T cd07382 71 KK----EI---LDFIDEEPRLLRPANYPPGTPGRGYGVVEVNGKKIAVINLMGRVFMPPLDNPFRAADELLEELK-EEAD 142 (255)
T ss_pred cc----hH---HHHHhcCcCceEeeecCCCCCCCCeEEEEECCEEEEEEEEecccCCCcCCCHHHHHHHHHHHHh-cCCC
Confidence 32 11 1111111 1122211 1122346677777766555443211 1111222333555554432 2567
Q ss_pred eEEEEeeccccccCCCCCCCChhHHHHHHHHHHhCCCcEEEeccccccc
Q 040421 251 WLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAYE 299 (407)
Q Consensus 251 ~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~ 299 (407)
.+||.+|.-.- ..+..+.. .-.-+||+++.||+|...
T Consensus 143 ~IIV~~H~g~t-----------sEk~ala~-~ldg~VdvIvGtHTHv~t 179 (255)
T cd07382 143 IIFVDFHAEAT-----------SEKIALGW-YLDGRVSAVVGTHTHVQT 179 (255)
T ss_pred EEEEEECCCCC-----------HHHHHHHH-hCCCCceEEEeCCCCccC
Confidence 89999997421 11122322 123369999999999753
|
DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. |
| >cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.30 E-value=9.6e-06 Score=76.05 Aligned_cols=52 Identities=21% Similarity=0.077 Sum_probs=30.3
Q ss_pred CCCCeEEEEeeccccccCCCCCCCChhHHHHHHHHHHh--CCCcEEEecccccccc
Q 040421 247 SETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVE--YKVDVVFAAHVHAYER 300 (407)
Q Consensus 247 ~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~--~~vdlvl~GH~H~y~r 300 (407)
.++..+|++.|........... ..........++.+ .++|++|+||.|....
T Consensus 190 ~~~D~IIvL~H~G~~~~~~~~~--~~~~~~~~~~l~~~~~~~iD~IlgGHsH~~~~ 243 (288)
T cd07412 190 GGVDAIVVLAHEGGSTKGGDDT--CSAASGPIADIVNRLDPDVDVVFAGHTHQAYN 243 (288)
T ss_pred CCCCEEEEEeCCCCCCCCCCcc--ccccChhHHHHHhhcCCCCCEEEeCccCcccc
Confidence 4677899999987643221110 00011122333444 4799999999998653
|
YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi |
| >cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.26 E-value=3.6e-06 Score=78.00 Aligned_cols=147 Identities=15% Similarity=0.112 Sum_probs=71.1
Q ss_pred CCceE-EEcCCccccCCCCCCCchhhhHHHHHHhhhhccCCeEEccCCCccccCCCCCCcccccccccccccCCC-----
Q 040421 126 KGQTV-LFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHEIDFAPQLGEAIPFKPFANRFHLPYR----- 199 (407)
Q Consensus 126 ~~d~v-l~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~----- 199 (407)
.+|.+ +.+||++...... .........+.+.. +++.++.||||+.+... .+....+.+..|.-
T Consensus 50 ~~~~l~l~~GD~~~gs~~~--~~~~g~~~~~~l~~----~g~da~~GNHefd~g~~-----~l~~~~~~~~~~~l~aN~~ 118 (264)
T cd07411 50 NPNTLLLDGGDTWQGSGEA--LYTRGQAMVDALNA----LGVDAMVGHWEFTYGPE-----RVRELFGRLNWPFLAANVY 118 (264)
T ss_pred CCCeEEEeCCCccCCChHH--hhcCChhHHHHHHh----hCCeEEecccccccCHH-----HHHHHHhhCCCCEEEEEEE
Confidence 67876 5799999543210 01111222333332 56666569999864211 01111111111110
Q ss_pred ----CCCCCCCeEEEEecCcE--EEEEEeccccCC--C--------ChHHHHHHHHhcccc-CCCCCCeEEEEeeccccc
Q 040421 200 ----APYSTAPFWYSIRRASA--HIIVMSCYSAFG--K--------YTPQYKWLEKEFPKV-NRSETPWLIVLMHCPLYN 262 (407)
Q Consensus 200 ----~~~~~~~~~ysf~~g~v--~fi~Lds~~~~~--~--------~~~Q~~WL~~~L~~~-~~~~~~~~iv~~H~P~~~ 262 (407)
+.. .-..|.-++.+++ .+|.+.+..... . .....+.+++.+++. ...+...+|++.|.+...
T Consensus 119 ~~~~~~~-~~~~~~i~~~~g~kVgviG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~iI~l~H~g~~~ 197 (264)
T cd07411 119 DDEAGER-VFPPYRIKEVGGVKIGVIGQTFPYVPIANPPRFTPGLTFGIREEELQEVVVKLRREEGVDVVVLLSHNGLPV 197 (264)
T ss_pred eCCCCCc-ccCCEEEEEECCEEEEEEEeccCCcccccCcCCCCCcEECCHHHHHHHHHHHHHHhCCCCEEEEEecCCchh
Confidence 000 1123555677774 566665431100 0 112334444432221 124677999999987421
Q ss_pred cCCCCCCCChhHHHHHHHHHHh-CCCcEEEeccccccc
Q 040421 263 SYVHHYMEGEPMRVLYEPWFVE-YKVDVVFAAHVHAYE 299 (407)
Q Consensus 263 ~~~~~~~~~~~~~~~l~~l~~~-~~vdlvl~GH~H~y~ 299 (407)
.. .+.++ .+||++|+||.|...
T Consensus 198 --------~~-------~la~~~~~iDlilgGH~H~~~ 220 (264)
T cd07411 198 --------DV-------ELAERVPGIDVILSGHTHERT 220 (264)
T ss_pred --------hH-------HHHhcCCCCcEEEeCcccccc
Confidence 01 12223 479999999999643
|
SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy |
| >cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.25 E-value=0.0001 Score=68.61 Aligned_cols=185 Identities=13% Similarity=0.105 Sum_probs=90.1
Q ss_pred CCcEEEEEecCCCCCC----------c----hhhHHHhhhC--CCCCc-eEEEcCCccccCCCCCCCchhhhHHHHHHhh
Q 040421 97 VPYTFGLIGDLGQTYY----------S----NRTLTHYELN--PIKGQ-TVLFVGDLSYADDYPFHDNNRWDTWGRFIER 159 (407)
Q Consensus 97 ~~~~f~~~gD~~~~~~----------~----~~~l~~~~~~--~~~~d-~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~ 159 (407)
..++|+..+|+|.... . ...++++.+. ..+++ ++|.+||.+............+....+++..
T Consensus 4 ~~ltILhtnD~Hg~l~~~~~~~~~~~~~gg~a~~i~~~~~~~~~~~~~~Llld~GD~~qGs~~~~~~~~~g~~~~~~mN~ 83 (282)
T cd07407 4 GDINFLHTTDTHGWLGGHLNDPNYSADWGDFASFVEHMREKADQKGVDLLLVDTGDLHDGNGLSDASPPPGSYSNPIFRM 83 (282)
T ss_pred ceEEEEEEcccccCCcCcCCcccccCCHHHHHHHHHHHHHHHHhcCCCEEEEeCCCccCCeeceeeecCCChHHHHHHHh
Confidence 5789999999996421 0 1112222211 12444 6788999997644321111133333444443
Q ss_pred hhccCCe-EEccCCCccccCCCCCCcccccccccccccCCC--------CCC---CCCCeEEEEecC-cE--EEEEEecc
Q 040421 160 NAAYQPW-IWTVGNHEIDFAPQLGEAIPFKPFANRFHLPYR--------APY---STAPFWYSIRRA-SA--HIIVMSCY 224 (407)
Q Consensus 160 ~~~~~P~-~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~--------~~~---~~~~~~ysf~~g-~v--~fi~Lds~ 224 (407)
+++ .+++||||+...... ...+..+.+....|.- +.. .....|.-+..+ ++ -+|.|-+.
T Consensus 84 ----mgyDa~tlGNHEFd~g~~~--l~~l~~~~~~~~fp~l~aNi~~~~~~~~~~~~~~~y~i~~~~~G~kIgiiGltt~ 157 (282)
T cd07407 84 ----MPYDLLTIGNHELYNYEVA--DDEYEGFVPSWGDRYLTSNVDITDDSGLLVPIGSRYRKFTTKHGLRVLAFGFLFD 157 (282)
T ss_pred ----cCCcEEeecccccCccccH--HHHHHHHHhhcCCCEEEEEEEEeCCCCcccccccceEEEEcCCCcEEEEEEEecc
Confidence 333 568999999532110 0000001010111100 000 011235556665 64 45666443
Q ss_pred ccC-------CCC--hHHHHHHHHhccccCCCCCCeEEEEeeccccccCCCCCCCChhHHHHHHHHHHhC-CCc-EEEec
Q 040421 225 SAF-------GKY--TPQYKWLEKEFPKVNRSETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEY-KVD-VVFAA 293 (407)
Q Consensus 225 ~~~-------~~~--~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~-~vd-lvl~G 293 (407)
..- ... ..+.+|+.+.|++ .++..+|+++|...-... ...+....+.++. ++| ++|+|
T Consensus 158 ~~~~~~~~~f~d~~~~~~~~~v~~~l~~---~~~DvIIvlsH~G~~~d~--------~~~~~~~~la~~~~~id~~Ii~G 226 (282)
T cd07407 158 FKGAANGVTVQPVADVVQEPWFQDAINN---EDVDLILVLGHMPVRDDA--------EFKVLHDAIRKIFPDTPIQFLGG 226 (282)
T ss_pred cccCCCCcEEcCHHHHHHHHHHHHHHHh---cCCCEEEEEeCCCCCCCc--------cHHHHHHHHHHhCCCCCEEEEeC
Confidence 210 011 1223488777864 457789999998854321 1111112234444 577 79999
Q ss_pred ccccc
Q 040421 294 HVHAY 298 (407)
Q Consensus 294 H~H~y 298 (407)
|.|..
T Consensus 227 HsH~~ 231 (282)
T cd07407 227 HSHVR 231 (282)
T ss_pred Ccccc
Confidence 99975
|
YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at |
| >cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.23 E-value=1.1e-05 Score=75.47 Aligned_cols=78 Identities=17% Similarity=0.119 Sum_probs=43.9
Q ss_pred eEEEEecCcE--EEEEEecccc--CC---C---ChHHHHHHHHhccccCCCCCCeEEEEeeccccccCCCCCCCChhHHH
Q 040421 207 FWYSIRRASA--HIIVMSCYSA--FG---K---YTPQYKWLEKEFPKVNRSETPWLIVLMHCPLYNSYVHHYMEGEPMRV 276 (407)
Q Consensus 207 ~~ysf~~g~v--~fi~Lds~~~--~~---~---~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~ 276 (407)
.|.-++.+++ -||.+-+... .. . .....+.+++.+++....++..+|++.|...-. ..
T Consensus 131 p~~i~~~~G~kIgviG~~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~lr~~~~D~II~l~H~G~~~------------d~ 198 (281)
T cd07409 131 PSTILTVGGEKIGIIGYTTPDTTELSSPGGKVKFLDEIEAAQKEADKLKAQGVNKIIALSHSGYEV------------DK 198 (281)
T ss_pred CeEEEEECCEEEEEEEEecCcccccccCCCceEECCHHHHHHHHHHHHHhcCCCEEEEEeccCchh------------HH
Confidence 3555677775 4555544221 00 0 122334455555443324577899999986321 11
Q ss_pred HHHHHHHh-CCCcEEEeccccccc
Q 040421 277 LYEPWFVE-YKVDVVFAAHVHAYE 299 (407)
Q Consensus 277 ~l~~l~~~-~~vdlvl~GH~H~y~ 299 (407)
.+.++ .+||++|+||.|...
T Consensus 199 ---~la~~~~giD~IiggH~H~~~ 219 (281)
T cd07409 199 ---EIARKVPGVDVIVGGHSHTFL 219 (281)
T ss_pred ---HHHHcCCCCcEEEeCCcCccc
Confidence 22333 479999999999864
|
CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si |
| >TIGR00619 sbcd exonuclease SbcD | Back alignment and domain information |
|---|
Probab=98.21 E-value=3.4e-06 Score=77.50 Aligned_cols=74 Identities=14% Similarity=0.105 Sum_probs=47.9
Q ss_pred cEEEEEecCCCCCCc---------hhhHHHh---hhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhc-c-C
Q 040421 99 YTFGLIGDLGQTYYS---------NRTLTHY---ELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAA-Y-Q 164 (407)
Q Consensus 99 ~~f~~~gD~~~~~~~---------~~~l~~~---~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~-~-~ 164 (407)
+||++++|+|.+... ...++++ +.+ .++|+||++||++..... .......+.++++.+.. . +
T Consensus 1 mkilh~SD~Hlg~~~~~~~~~~~~~~~l~~l~~~~~~-~~~D~lli~GDi~d~~~p---~~~~~~~~~~~l~~l~~~~~i 76 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVSRLAEQKAFLDDLLEFAKA-EQIDALLVAGDVFDTANP---PAEAQELFNAFFRNLSDANPI 76 (253)
T ss_pred CEEEEEhhhcCCCccCCCChHHHHHHHHHHHHHHHHH-cCCCEEEECCccCCCCCC---CHHHHHHHHHHHHHHHhcCCc
Confidence 689999999987431 1123332 223 389999999999965321 11222334555555543 3 8
Q ss_pred CeEEccCCCccc
Q 040421 165 PWIWTVGNHEID 176 (407)
Q Consensus 165 P~~~~~GNHD~~ 176 (407)
|+++++||||..
T Consensus 77 ~v~~i~GNHD~~ 88 (253)
T TIGR00619 77 PIVVISGNHDSA 88 (253)
T ss_pred eEEEEccCCCCh
Confidence 999999999984
|
This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). |
| >PRK04036 DNA polymerase II small subunit; Validated | Back alignment and domain information |
|---|
Probab=98.20 E-value=1.7e-05 Score=79.86 Aligned_cols=81 Identities=14% Similarity=0.176 Sum_probs=51.6
Q ss_pred CCCcEEEEEecCCCCCCc--h---hhHHHhhh-C-------CCCCceEEEcCCccccCCC-CCCC--------chhhhHH
Q 040421 96 DVPYTFGLIGDLGQTYYS--N---RTLTHYEL-N-------PIKGQTVLFVGDLSYADDY-PFHD--------NNRWDTW 153 (407)
Q Consensus 96 ~~~~~f~~~gD~~~~~~~--~---~~l~~~~~-~-------~~~~d~vl~~GD~~y~~~~-~~~~--------~~~~~~~ 153 (407)
...+++++++|.|.+... . ..+..+.. . ..+++.+|++||++...+. +... ....+.+
T Consensus 241 ~~~~~i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~~~~~~~l 320 (504)
T PRK04036 241 DEKVYAVFISDVHVGSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDIYEQYEAA 320 (504)
T ss_pred CCccEEEEEcccCCCCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhhHHHHHHH
Confidence 467899999999987542 1 12222222 0 1378999999999964221 1100 0112345
Q ss_pred HHHHhhhhccCCeEEccCCCccc
Q 040421 154 GRFIERNAAYQPWIWTVGNHEID 176 (407)
Q Consensus 154 ~~~~~~~~~~~P~~~~~GNHD~~ 176 (407)
.++++.+...+|+++++||||..
T Consensus 321 ~~~L~~L~~~i~V~~ipGNHD~~ 343 (504)
T PRK04036 321 AEYLKQIPEDIKIIISPGNHDAV 343 (504)
T ss_pred HHHHHhhhcCCeEEEecCCCcch
Confidence 56667777788999999999974
|
|
| >KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=98.19 E-value=1.2e-05 Score=76.92 Aligned_cols=117 Identities=15% Similarity=0.191 Sum_probs=72.1
Q ss_pred CCCcEEEEEecCCCCCCc-----h---------hhHH---HhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHh
Q 040421 96 DVPYTFGLIGDLGQTYYS-----N---------RTLT---HYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIE 158 (407)
Q Consensus 96 ~~~~~f~~~gD~~~~~~~-----~---------~~l~---~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~ 158 (407)
+..+|++.++|.|.-.+. . .-+. .+.+...+||.++++||++.+..+ ..+++|.+..+-++
T Consensus 46 ~n~~ki~~vaDPQilg~~~~~~~~~~Ldk~~~D~~lrr~f~~~~~~lkPdvvffLGDLfDeG~~--~~~eEf~~~~~Rfk 123 (410)
T KOG3662|consen 46 ENSTKILLVADPQILGNWPKKFLVSWLDKYGNDWYLRRSFDMSQWRLKPDVVFFLGDLFDEGQW--AGDEEFKKRYERFK 123 (410)
T ss_pred CCceEEEEecCchhcCCCCCccccchHHhhhhHHHHHHHHHHHHhccCCCEEEEeccccccCcc--CChHHHHHHHHHHH
Confidence 578999999999975421 0 0111 122223599999999999975433 23456655433344
Q ss_pred hhh---ccCCeEEccCCCccccCCCCCCcccccccccccccCCCCCCCCCCeEEEEecCcEEEEEEeccc
Q 040421 159 RNA---AYQPWIWTVGNHEIDFAPQLGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRRASAHIIVMSCYS 225 (407)
Q Consensus 159 ~~~---~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ysf~~g~v~fi~Lds~~ 225 (407)
.+. ..+|.+.++||||.++... .......+|.- ..++...+|+.+++.|+++|++.
T Consensus 124 kIf~~k~~~~~~~i~GNhDIGf~~~-----~~~~~i~Rfe~------~fg~~~r~f~v~~~tf~~~d~~~ 182 (410)
T KOG3662|consen 124 KIFGRKGNIKVIYIAGNHDIGFGNE-----LIPEWIDRFES------VFGPTERRFDVGNLTFVMFDSNA 182 (410)
T ss_pred HhhCCCCCCeeEEeCCccccccccc-----cchhHHHHHHH------hhcchhhhhccCCceeEEeeehh
Confidence 332 3689999999999974321 11112223211 01234567899999999999864
|
|
| >cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.17 E-value=3.1e-05 Score=70.81 Aligned_cols=75 Identities=13% Similarity=0.190 Sum_probs=46.1
Q ss_pred EEEecCCCCCCc--h---hhHHHhhhCC----CCCceEEEcCCccccCCC-CCCC--------chhhhHHHHHHhhhhcc
Q 040421 102 GLIGDLGQTYYS--N---RTLTHYELNP----IKGQTVLFVGDLSYADDY-PFHD--------NNRWDTWGRFIERNAAY 163 (407)
Q Consensus 102 ~~~gD~~~~~~~--~---~~l~~~~~~~----~~~d~vl~~GD~~y~~~~-~~~~--------~~~~~~~~~~~~~~~~~ 163 (407)
++++|.|.+... . ..+.++.+.. .++|.|+++||++..... .... .+.+..+.++++.+...
T Consensus 2 ~~iSDlHl~~~~~~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~ 81 (243)
T cd07386 2 VFISDVHVGSKTFLEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEYLSDVPSH 81 (243)
T ss_pred EEecccCCCchhhhHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHHHHhcccC
Confidence 578999976432 1 1222222221 257999999999964210 0000 11234456666777777
Q ss_pred CCeEEccCCCccc
Q 040421 164 QPWIWTVGNHEID 176 (407)
Q Consensus 164 ~P~~~~~GNHD~~ 176 (407)
+|+++++||||..
T Consensus 82 ~~v~~ipGNHD~~ 94 (243)
T cd07386 82 IKIIIIPGNHDAV 94 (243)
T ss_pred CeEEEeCCCCCcc
Confidence 9999999999984
|
The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera |
| >cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.14 E-value=2e-05 Score=73.76 Aligned_cols=51 Identities=16% Similarity=0.139 Sum_probs=30.3
Q ss_pred CCCCeEEEEeeccccccCCCCCCCChhHHHHHHHHHHhCCCcEEEeccccccc
Q 040421 247 SETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAYE 299 (407)
Q Consensus 247 ~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~ 299 (407)
.++..+|++.|......... .........+...+...++|++|.||.|...
T Consensus 172 ~~~D~VI~lsH~G~~~~~~~--~~~~~~~~~lA~~~~~~giD~IigGHsH~~~ 222 (285)
T cd07405 172 EKPDIVIAATHMGHYDNGEH--GSNAPGDVEMARALPAGGLDLIVGGHSQDPV 222 (285)
T ss_pred cCCCEEEEEecccccCCccc--cccCchHHHHHHhcCCCCCCEEEeCCCCccc
Confidence 35678999999987532211 0111111233333333589999999999854
|
UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs |
| >TIGR00282 metallophosphoesterase, MG_246/BB_0505 family | Back alignment and domain information |
|---|
Probab=98.14 E-value=0.00015 Score=66.56 Aligned_cols=197 Identities=17% Similarity=0.124 Sum_probs=101.7
Q ss_pred cEEEEEecCCCCCCc---hhhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccCCeEEccCCCcc
Q 040421 99 YTFGLIGDLGQTYYS---NRTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHEI 175 (407)
Q Consensus 99 ~~f~~~gD~~~~~~~---~~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~ 175 (407)
+||+++||.=..... ...|..+.++ .++||++..||++-. +. ... ....+.+.. ..+-++ +.|||++
T Consensus 1 m~ilfiGDi~G~~Gr~~l~~~L~~lk~~-~~~D~vIaNgEn~~g-G~-Gi~----~~~~~~L~~--~GvDvi-T~GNH~~ 70 (266)
T TIGR00282 1 IKFLFIGDVYGKAGRKIVKNNLPQLKSK-YQADLVIANGENTTH-GK-GLT----LKIYEFLKQ--SGVNYI-TMGNHTW 70 (266)
T ss_pred CeEEEEEecCCHHHHHHHHHHHHHHHHh-CCCCEEEEcCcccCC-CC-CCC----HHHHHHHHh--cCCCEE-Eccchhc
Confidence 589999998543211 2334455554 378999999999853 21 111 112222222 234444 5599999
Q ss_pred ccCCCCCCcccccccccccccCCCCCCCCCCeEEEEecCcEEEEEEeccc-cCC-C--ChHHHHHHHHhccccCCCCCCe
Q 040421 176 DFAPQLGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRRASAHIIVMSCYS-AFG-K--YTPQYKWLEKEFPKVNRSETPW 251 (407)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ysf~~g~v~fi~Lds~~-~~~-~--~~~Q~~WL~~~L~~~~~~~~~~ 251 (407)
+...............+..+.|.. ..+..+..+..++.++-+++-.. .+. . ...-+.-+++.+++.. .+++.
T Consensus 71 Dkge~~~~i~~~~~~lrpanyp~~---~pG~g~~i~~~nG~kiaVinl~G~~fm~~~~~~~Pf~~~d~~i~~lk-~~~d~ 146 (266)
T TIGR00282 71 FQKLILDVVINQKDLVRPLNFDTS---FAGKGSLVFEFNGAKIAVTNLQGTSVNLPFKTTNPFKVLKELINMLK-KDCDL 146 (266)
T ss_pred cCcHHHHHHhccccccccCCCCCC---CCCCCcEEEEECCEEEEEEECCCcccCCccccCCHHHHHHHHHHhhh-cCCCE
Confidence 632100000000001111122221 12234555677776666655421 111 1 1112223333333322 24678
Q ss_pred EEEEeeccccccCCCCCCCChhHHHHHHHHHHhCCCcEEEeccccccccccccccceeeccCCcccccCCCCCceEEE-e
Q 040421 252 LIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAYERSERMSNIAYNVTNALCSPVSDQSAPVYIT-I 330 (407)
Q Consensus 252 ~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~g~~~iv-~ 330 (407)
+||.+|.-. ... +.....+-+-+|++|+.-|+|...--..+ -++||-||+ .
T Consensus 147 IIVd~Haea-----------tsE-K~a~~~~ldg~vsaVvGtHtHV~TaD~~i----------------l~~gtayitD~ 198 (266)
T TIGR00282 147 IFVDFHAET-----------TSE-KNAFGMAFDGYVTAVVGTHTHVPTADLRI----------------LPKGTAYITDV 198 (266)
T ss_pred EEEEeCCCC-----------HHH-HHHHHHHhCCCccEEEeCCCCCCCCccee----------------CCCCCEEEecC
Confidence 999999642 112 34456677889999999999975433222 147788987 5
Q ss_pred CCCCCCC
Q 040421 331 GDGGNQE 337 (407)
Q Consensus 331 G~gG~~~ 337 (407)
|.-|...
T Consensus 199 Gm~G~~~ 205 (266)
T TIGR00282 199 GMTGPFG 205 (266)
T ss_pred CcccCcc
Confidence 6666543
|
A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase. |
| >COG2908 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=98.13 E-value=4.8e-06 Score=73.57 Aligned_cols=70 Identities=16% Similarity=0.127 Sum_probs=42.8
Q ss_pred EEecCCCCCCch---hhHHHhhh-CCCCCceEEEcCCccccCCCCCCCchhhhHHHH----HHhhhh-ccCCeEEccCCC
Q 040421 103 LIGDLGQTYYSN---RTLTHYEL-NPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGR----FIERNA-AYQPWIWTVGNH 173 (407)
Q Consensus 103 ~~gD~~~~~~~~---~~l~~~~~-~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~----~~~~~~-~~~P~~~~~GNH 173 (407)
+++|.|.+.... ..+...++ ...+.|.+.++||++. ++... ..|.++.+ .+..++ ...|+|.++|||
T Consensus 2 FISDlHL~~~~p~~t~~fl~Fl~~~a~~ad~lyilGDifd--~w~g~--~~~~~~~~~V~~~l~~~a~~G~~v~~i~GN~ 77 (237)
T COG2908 2 FISDLHLGPKRPALTAFFLDFLREEAAQADALYILGDIFD--GWIGD--DEPPQLHRQVAQKLLRLARKGTRVYYIHGNH 77 (237)
T ss_pred eeeccccCCCCcHHHHHHHHHHHhccccCcEEEEechhhh--hhhcC--CcccHHHHHHHHHHHHHHhcCCeEEEecCch
Confidence 589999984332 22233333 3235699999999994 43322 24544432 233333 359999999999
Q ss_pred ccc
Q 040421 174 EID 176 (407)
Q Consensus 174 D~~ 176 (407)
|+.
T Consensus 78 Dfl 80 (237)
T COG2908 78 DFL 80 (237)
T ss_pred HHH
Confidence 974
|
|
| >PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=98.12 E-value=3e-05 Score=86.18 Aligned_cols=190 Identities=16% Similarity=0.108 Sum_probs=91.0
Q ss_pred CCCcEEEEEecCCCCCCchhh----HHHhhhCCCCCceEEE-cCCccccCCCCCCCchhhhHHHHHHhhhhccCCeEEcc
Q 040421 96 DVPYTFGLIGDLGQTYYSNRT----LTHYELNPIKGQTVLF-VGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTV 170 (407)
Q Consensus 96 ~~~~~f~~~gD~~~~~~~~~~----l~~~~~~~~~~d~vl~-~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~ 170 (407)
...++|+.++|+|........ ++++.+. +|+.+++ +||++...... .........+.+..+ -.-+.++
T Consensus 658 ~~~l~Il~~nD~Hg~l~g~~r~~~~i~~~r~~--~~~~l~ld~GD~~~gs~~~--~~~~g~~~~~~ln~l---g~d~~~~ 730 (1163)
T PRK09419 658 NWELTILHTNDFHGHLDGAAKRVTKIKEVKEE--NPNTILVDAGDVYQGSLYS--NLLKGLPVLKMMKEM---GYDASTF 730 (1163)
T ss_pred ceEEEEEEEeecccCCCCHHHHHHHHHHHHhh--CCCeEEEecCCCCCCcchh--hhcCChHHHHHHhCc---CCCEEEe
Confidence 356999999999965433333 3333333 6777655 99998543211 111122333343332 2346699
Q ss_pred CCCccccCCC-----CCCcc---cccccc-ccccc-------CCCCC-CCCCCeEEEEecCcE--EEEEEecccc--C--
Q 040421 171 GNHEIDFAPQ-----LGEAI---PFKPFA-NRFHL-------PYRAP-YSTAPFWYSIRRASA--HIIVMSCYSA--F-- 227 (407)
Q Consensus 171 GNHD~~~~~~-----~~~~~---~~~~~~-~~f~~-------P~~~~-~~~~~~~ysf~~g~v--~fi~Lds~~~--~-- 227 (407)
||||+.+... ..... .-..|. ..|.+ ...+. ...-..|.-++.+++ -||.|-+... .
T Consensus 731 GNHEfd~g~~~l~~~l~~~~~~~~~~~~~~~~fp~l~aNv~~~~~~~~~~~~~py~I~e~~G~kIgiiGltt~~~~~~~~ 810 (1163)
T PRK09419 731 GNHEFDWGPDVLPDWLKGGGDPKNRHQFEKPDFPFVASNIYVKKTGKLVSWAKPYILVEVNGKKVGFIGLTTPETAYKTS 810 (1163)
T ss_pred cccccccChHHHHHHHHhcccccccccccCCCCCEEEEEEEeCCCCccccccCCEEEEEECCEEEEEEEecccccccccC
Confidence 9999864321 00000 000000 00110 00000 001124556677774 5666654211 0
Q ss_pred ----C--CChHHHHHHHHhccccC-CCCCCeEEEEeeccccccCCCCCCCChhHHHHHHHHHHhC-CCcEEEeccccccc
Q 040421 228 ----G--KYTPQYKWLEKEFPKVN-RSETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEY-KVDVVFAAHVHAYE 299 (407)
Q Consensus 228 ----~--~~~~Q~~WL~~~L~~~~-~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~-~vdlvl~GH~H~y~ 299 (407)
. ......+.+++.+++.. ..++..+|++.|......... ..+ ....|.++. +||++|.||.|..-
T Consensus 811 p~~~~~l~f~d~~e~~~~~v~~Lr~~~~~D~VV~LsH~G~~~d~~~--~~~-----~~~~lA~~v~gIDvIigGHsH~~~ 883 (1163)
T PRK09419 811 PGNVKNLEFKDPAEAAKKWVKELKEKEKVDAIIALTHLGSNQDRTT--GEI-----TGLELAKKVKGVDAIISAHTHTLV 883 (1163)
T ss_pred CCCcCCcEEcCHHHHHHHHHHHHHhhcCCCEEEEEecCCccccccc--ccc-----HHHHHHHhCCCCCEEEeCCCCccc
Confidence 0 01122223333322221 146779999999986432211 111 123344443 79999999999753
|
|
| >cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=98.06 E-value=6.9e-06 Score=73.09 Aligned_cols=68 Identities=19% Similarity=0.070 Sum_probs=39.6
Q ss_pred EEEecCCCCCCchhhHHHhhhC-------CCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhh-----hccCCeEEc
Q 040421 102 GLIGDLGQTYYSNRTLTHYELN-------PIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERN-----AAYQPWIWT 169 (407)
Q Consensus 102 ~~~gD~~~~~~~~~~l~~~~~~-------~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~-----~~~~P~~~~ 169 (407)
+++||+|........+-+...- ..+.|.++++||++.... +. .+..+.+..+ ....+++++
T Consensus 1 ~vi~DIHG~~~~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vdrG~----~~---~~vl~~l~~l~~~~~~~~~~v~~l 73 (208)
T cd07425 1 VAIGDLHGDLDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGP----DV---IEILWLLYKLEQEAAKAGGKVHFL 73 (208)
T ss_pred CEEeCccCCHHHHHHHHHHCCCCCccccccCCCcEEEEECCCcCCCc----CH---HHHHHHHHHHHHHHHhcCCeEEEe
Confidence 3689999875433222211110 126799999999996422 11 1223333222 234689999
Q ss_pred cCCCccc
Q 040421 170 VGNHEID 176 (407)
Q Consensus 170 ~GNHD~~ 176 (407)
+||||..
T Consensus 74 ~GNHE~~ 80 (208)
T cd07425 74 LGNHELM 80 (208)
T ss_pred eCCCcHH
Confidence 9999984
|
This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal |
| >PRK10966 exonuclease subunit SbcD; Provisional | Back alignment and domain information |
|---|
Probab=98.04 E-value=7.9e-06 Score=80.11 Aligned_cols=74 Identities=12% Similarity=0.065 Sum_probs=45.8
Q ss_pred cEEEEEecCCCCCCc--h-------hhHHH---hhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhc-cCC
Q 040421 99 YTFGLIGDLGQTYYS--N-------RTLTH---YELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAA-YQP 165 (407)
Q Consensus 99 ~~f~~~gD~~~~~~~--~-------~~l~~---~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~-~~P 165 (407)
+||++++|+|.+... . ..+.. ++.. .+||+||++||++..... .......+.+++..+.. .+|
T Consensus 1 mkilh~SDlHlG~~~~~~~~~~~~~~~l~~l~~~i~~-~~~D~viIaGDifD~~~p---~~~a~~~~~~~l~~L~~~~~~ 76 (407)
T PRK10966 1 MRILHTSDWHLGQNFYSKSRAAEHQAFLDWLLEQVQE-HQVDAIIVAGDIFDTGSP---PSYARELYNRFVVNLQQTGCQ 76 (407)
T ss_pred CEEEEEcccCCCCcccCcccHHHHHHHHHHHHHHHHh-cCCCEEEECCccccCCCC---cHHHHHHHHHHHHHHHhcCCc
Confidence 589999999987421 0 11222 2223 389999999999954321 11111223344444432 589
Q ss_pred eEEccCCCccc
Q 040421 166 WIWTVGNHEID 176 (407)
Q Consensus 166 ~~~~~GNHD~~ 176 (407)
+++++||||..
T Consensus 77 v~~I~GNHD~~ 87 (407)
T PRK10966 77 LVVLAGNHDSV 87 (407)
T ss_pred EEEEcCCCCCh
Confidence 99999999974
|
|
| >PHA02546 47 endonuclease subunit; Provisional | Back alignment and domain information |
|---|
Probab=98.04 E-value=1.4e-05 Score=76.78 Aligned_cols=75 Identities=17% Similarity=0.047 Sum_probs=45.7
Q ss_pred cEEEEEecCCCCCCc---------hhhHHHh---hhCCCCCceEEEcCCccccCCCCCCCchhhhHHHH-HHhhhh-ccC
Q 040421 99 YTFGLIGDLGQTYYS---------NRTLTHY---ELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGR-FIERNA-AYQ 164 (407)
Q Consensus 99 ~~f~~~gD~~~~~~~---------~~~l~~~---~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~-~~~~~~-~~~ 164 (407)
+||+.+||+|.+... ...++++ +.+ .++|+||++||++..... ..........+ +++.+. ..+
T Consensus 1 MKilhiSD~HLG~~~~~~~~~~~~~~~l~~ii~~a~~-~~vD~VliaGDlfD~~~~--~~~~~~~~~~~~l~~~L~~~gi 77 (340)
T PHA02546 1 MKILLIGDQHLGVRKDDPWFQNYQLKFIKQAIEYSKA-HGITTWIQLGDTFDVRKA--ITQNTMNFVREKIFDLLKEAGI 77 (340)
T ss_pred CeEEEEeeecCCCcCCChhhHHHHHHHHHHHHHHHHH-cCCCEEEECCcccCCCCC--CCHHHHHHHHHHHHHHHHHCCC
Confidence 589999999987432 1223332 222 389999999999954321 11122221222 233342 368
Q ss_pred CeEEccCCCccc
Q 040421 165 PWIWTVGNHEID 176 (407)
Q Consensus 165 P~~~~~GNHD~~ 176 (407)
|+++++||||..
T Consensus 78 ~v~~I~GNHD~~ 89 (340)
T PHA02546 78 TLHVLVGNHDMY 89 (340)
T ss_pred eEEEEccCCCcc
Confidence 999999999974
|
|
| >COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.94 E-value=0.00017 Score=73.47 Aligned_cols=189 Identities=14% Similarity=0.101 Sum_probs=97.1
Q ss_pred CCCCCcEEEEEecCCCCCC------------chhh----HHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHH
Q 040421 94 GPDVPYTFGLIGDLGQTYY------------SNRT----LTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFI 157 (407)
Q Consensus 94 ~~~~~~~f~~~gD~~~~~~------------~~~~----l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~ 157 (407)
.....++|+...|+|.... .... +++..++ .+..++|.+||++........ ........+.|
T Consensus 22 ~~~~~l~ilhtnD~H~~l~~~~~~~~~~~~~g~~~~~~~v~~~ra~-~~~~llld~GD~~~G~~l~~~-~~~g~~~~~~m 99 (517)
T COG0737 22 AETVKLTILHTNDLHGHLEPYDYDDDGDTDGGLARIATLVKQLRAE-NKNVLLLDAGDLIQGSPLSDY-LTKGEPTVDLL 99 (517)
T ss_pred cCceeEEEEEeccccccceeccccccCcccccHHHHHHHHHHHHhh-cCCeEEEeCCcccCCcccccc-ccCCChHHHHH
Confidence 3457899999999997543 1212 2233333 255789999999976443221 12233334444
Q ss_pred hhhhccCCeEEccCCCccccCCCCCCcccccccccccccC--------CCC-CCCCCCeEEEEecCcE--EEEEEeccc-
Q 040421 158 ERNAAYQPWIWTVGNHEIDFAPQLGEAIPFKPFANRFHLP--------YRA-PYSTAPFWYSIRRASA--HIIVMSCYS- 225 (407)
Q Consensus 158 ~~~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~P--------~~~-~~~~~~~~ysf~~g~v--~fi~Lds~~- 225 (407)
..+. .=..++||||+.+... .+..+......| ... ....-+.|.-++.+++ -+|.+.+..
T Consensus 100 N~m~---yDa~tiGNHEFd~g~~-----~l~~~~~~~~fp~l~aNv~~~~~~~~~~~~Py~I~~~~g~KIgiIG~~~~~~ 171 (517)
T COG0737 100 NALG---YDAMTLGNHEFDYGLE-----ALARLLDEAKFPVLSANVYDKNSTGPPFFKPYAIKEVGGVKIGIIGLTTPTI 171 (517)
T ss_pred hhcC---CcEEeecccccccCHH-----HHHHHHhccCCceEEeeeEecCCCCccCcCCeEEEecCCeEEEEEEecCCcc
Confidence 4321 2256999999964311 001111111111 000 0112245777888874 566666411
Q ss_pred -cC---C-----CChHHHHHHHHhccccCCCCCCeEEEEeeccccccCCCCCCCChhHHHHHHHHHHhCCCcEEEecccc
Q 040421 226 -AF---G-----KYTPQYKWLEKEFPKVNRSETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVH 296 (407)
Q Consensus 226 -~~---~-----~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H 296 (407)
.+ . ......+++++.+.+.....+..+|++.|.+........... ........ .++|+++.||.|
T Consensus 172 ~~~~~~~~~~~~~f~d~~e~~~~~i~elk~~~vD~iI~LsH~G~~~d~~~~~~~-~~~~~~~~-----~~iD~i~~GH~H 245 (517)
T COG0737 172 PTWEKPNAIEGVTFRDPIEAAKKYIPELKGEGVDVIIALSHLGIEDDLELASEV-PGDVDVAV-----PGIDLIIGGHSH 245 (517)
T ss_pred cccccccccCCcEEcCHHHHHHHHHHHHHhcCCCEEEEEeccCcCccccccccc-cccccccc-----cCcceEeccCCc
Confidence 11 1 112344555555544332337789999999976543221100 00000000 349999999999
Q ss_pred cc
Q 040421 297 AY 298 (407)
Q Consensus 297 ~y 298 (407)
.+
T Consensus 246 ~~ 247 (517)
T COG0737 246 TV 247 (517)
T ss_pred cc
Confidence 64
|
|
| >PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed | Back alignment and domain information |
|---|
Probab=97.92 E-value=0.0001 Score=75.57 Aligned_cols=194 Identities=14% Similarity=0.056 Sum_probs=88.4
Q ss_pred CCCcEEEEEecCCCCCC-------chhh----HHHhhhC---CCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhh
Q 040421 96 DVPYTFGLIGDLGQTYY-------SNRT----LTHYELN---PIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNA 161 (407)
Q Consensus 96 ~~~~~f~~~gD~~~~~~-------~~~~----l~~~~~~---~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~ 161 (407)
...++|+.++|+|.... .... ++++.++ ....-++|.+||++...... .-.......+++..+
T Consensus 32 ~~~ltil~tnD~Hg~~~~~~~~~~G~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~~Gs~~s--~~~~g~~~i~~mN~~- 108 (551)
T PRK09558 32 TYKITILHTNDHHGHFWRNEYGEYGLAAQKTLVDQIRKEVAAEGGSVLLLSGGDINTGVPES--DLQDAEPDFRGMNLI- 108 (551)
T ss_pred ceEEEEEEecccCCCccccccCCccHHHHHHHHHHHHHHhhccCCCEEEEcCCccccceEhh--hhcCCchhHHHHhcC-
Confidence 35799999999997532 1122 2223211 11346889999998542210 001111223333322
Q ss_pred ccCCeEEccCCCccccCCCC-C---CcccccccccccccCCCCCCCCCCeEEEEecCcE--EEEEEecccc--C------
Q 040421 162 AYQPWIWTVGNHEIDFAPQL-G---EAIPFKPFANRFHLPYRAPYSTAPFWYSIRRASA--HIIVMSCYSA--F------ 227 (407)
Q Consensus 162 ~~~P~~~~~GNHD~~~~~~~-~---~~~~~~~~~~~f~~P~~~~~~~~~~~ysf~~g~v--~fi~Lds~~~--~------ 227 (407)
-.=..++||||+.+.... . ....|.-..........+.. .-..|.-++.+++ -||.+-+... +
T Consensus 109 --g~Da~tlGNHEFD~G~~~L~~~~~~a~fp~l~aNv~~~~~g~~-~~~py~i~~~~G~kIgiiG~~t~~~~~~~~~~~~ 185 (551)
T PRK09558 109 --GYDAMAVGNHEFDNPLSVLRKQEKWAKFPFLSANIYQKSTGER-LFKPYAIFDRQGLKIAVIGLTTEDTAKIGNPEYF 185 (551)
T ss_pred --CCCEEcccccccCcCHHHHHHhhccCCCCEEEEEEEECCCCCc-ccCCeEEEEECCEEEEEEEEeccccccccCCCCc
Confidence 122557899999753210 0 00011000000000110111 1134556677875 4555543211 0
Q ss_pred -----CCChHHHHHHHHhccccCCCCCCeEEEEeeccccccCCCCCCCChhHHHHHHHHHHhCCCcEEEeccccccc
Q 040421 228 -----GKYTPQYKWLEKEFPKVNRSETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAYE 299 (407)
Q Consensus 228 -----~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~ 299 (407)
....+..+-+-++|++. .+...+|++.|.......... ........+..-+...+||++|.||.|..-
T Consensus 186 ~~~~f~d~~e~a~~~v~~Lk~~--~~~D~IV~LsH~G~~~~~~~~--~~~~~d~~la~~~~~~~IDvIlgGHsH~~~ 258 (551)
T PRK09558 186 TDIEFRDPAEEAKKVIPELKQT--EKPDVIIALTHMGHYDDGEHG--SNAPGDVEMARSLPAGGLDMIVGGHSQDPV 258 (551)
T ss_pred CCceECCHHHHHHHHHHHHHhc--cCCCEEEEEeccccccCCccC--CCCccHHHHHHhCCccCceEEEeCCCCccc
Confidence 00111222233334421 467799999998875322110 000001122222222379999999999753
|
|
| >cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.91 E-value=3.7e-05 Score=64.34 Aligned_cols=66 Identities=17% Similarity=0.202 Sum_probs=40.3
Q ss_pred EEEecCCCCCCc-hhhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhh-hhccCCeEEccCCCc
Q 040421 102 GLIGDLGQTYYS-NRTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIER-NAAYQPWIWTVGNHE 174 (407)
Q Consensus 102 ~~~gD~~~~~~~-~~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~-~~~~~P~~~~~GNHD 174 (407)
+++||.+..... ...++++.+...+.|++|++||..-... +. ..|...+.. ....+|.|++-|||+
T Consensus 1 LV~G~~~G~l~~~~~kv~~~~~k~gpFd~~ic~Gdff~~~~----~~---~~~~~y~~g~~~~pipTyf~ggn~~ 68 (150)
T cd07380 1 LVCGDVNGRLKALFEKVNTINKKKGPFDALLCVGDFFGDDE----DD---EELEAYKDGSKKVPIPTYFLGGNNP 68 (150)
T ss_pred CeeecCCccHHHHHHHHHHHhcccCCeeEEEEecCccCCcc----ch---hhHHHHhcCCccCCCCEEEECCCCC
Confidence 367888765322 2334444433357899999999985322 11 234444332 335689999999997
|
CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site |
| >cd08162 MPP_PhoA_N Synechococcus sp | Back alignment and domain information |
|---|
Probab=97.85 E-value=0.00013 Score=68.98 Aligned_cols=39 Identities=18% Similarity=0.135 Sum_probs=26.1
Q ss_pred CCCCeEEEEeeccccccCCCCCCCChhHHHHHHHHHHhC-CCcEEEeccccccc
Q 040421 247 SETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEY-KVDVVFAAHVHAYE 299 (407)
Q Consensus 247 ~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~-~vdlvl~GH~H~y~ 299 (407)
++...+|+++|..-+. .+ ..|.++. +||++|.||.|.+-
T Consensus 206 ~gvD~II~LsH~g~~~---------~d-----~~lA~~v~gIDvIigGHsH~~l 245 (313)
T cd08162 206 QGINKIILLSHLQQIS---------IE-----QALAALLSGVDVIIAGGSNTLL 245 (313)
T ss_pred CCCCEEEEEecccccc---------hH-----HHHHhcCCCCCEEEeCCCCccC
Confidence 4577899999973111 11 1244443 79999999999763
|
strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat |
| >TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.00023 Score=72.80 Aligned_cols=146 Identities=18% Similarity=0.144 Sum_probs=70.1
Q ss_pred CCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccCCeEEccCCCccccCCCCCCcccccccccccccCCC------
Q 040421 126 KGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHEIDFAPQLGEAIPFKPFANRFHLPYR------ 199 (407)
Q Consensus 126 ~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~------ 199 (407)
+.-++|.+||++...... .-.....-.+++..+ --=..++||||+.+... .+..+.+...+|.-
T Consensus 49 ~n~l~ldaGD~~~gs~~~--~~~~g~~~i~~~N~~---g~Da~~lGNHEFd~G~~-----~l~~~~~~~~fp~l~aNv~~ 118 (550)
T TIGR01530 49 KNALVLHAGDAIIGTLYF--TLFGGRADAALMNAA---GFDFFTLGNHEFDAGNE-----GLKEFLEPLEIPVLSANVIP 118 (550)
T ss_pred CCeEEEECCCCCCCccch--hhcCCHHHHHHHhcc---CCCEEEeccccccCCHH-----HHHHHHHhCCCCEEEEeeec
Confidence 346889999999643221 011112222333322 22366899999964321 01111111111110
Q ss_pred -CCC---CCCCeEEEEecCc--EEEEEEecccc-C---CCC------h--HHHHHHHHhccccCCCCCCeEEEEeecccc
Q 040421 200 -APY---STAPFWYSIRRAS--AHIIVMSCYSA-F---GKY------T--PQYKWLEKEFPKVNRSETPWLIVLMHCPLY 261 (407)
Q Consensus 200 -~~~---~~~~~~ysf~~g~--v~fi~Lds~~~-~---~~~------~--~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~ 261 (407)
... ..-..|.-++.++ +-||.|.+... . ... + +-.+-..+.|++ .+...+|++.|...-
T Consensus 119 ~~~~~~~~~~~p~~i~~~~g~kIgiiGl~~~~~~~~~~~~~~~~~f~d~~~~~~~~v~~Lk~---~g~D~II~lsH~g~~ 195 (550)
T TIGR01530 119 DAASILHGKWKPSAIFERAGEKIAIIGLDTVKKTVESSSPGKDIKFIDEIAAAQIAANALKQ---QGINKIILLSHAGFE 195 (550)
T ss_pred CCCcccccCcCceEEEEECCeEEEEEEeecCcccccccCCCCceEECCHHHHHHHHHHHHHh---CCCCEEEEEecCCcH
Confidence 000 0113455667777 56777754211 0 000 1 112222234443 457789999997531
Q ss_pred ccCCCCCCCChhHHHHHHHHHHh-CCCcEEEeccccccc
Q 040421 262 NSYVHHYMEGEPMRVLYEPWFVE-YKVDVVFAAHVHAYE 299 (407)
Q Consensus 262 ~~~~~~~~~~~~~~~~l~~l~~~-~~vdlvl~GH~H~y~ 299 (407)
. . ..+.++ -+||++|+||+|.+-
T Consensus 196 ~--------d-------~~la~~~~~iD~IigGHsH~~~ 219 (550)
T TIGR01530 196 K--------N-------CEIAQKINDIDVIVSGDSHYLL 219 (550)
T ss_pred H--------H-------HHHHhcCCCCCEEEeCCCCccc
Confidence 1 0 123333 279999999999854
|
This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc. |
| >cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.71 E-value=5e-05 Score=65.56 Aligned_cols=49 Identities=18% Similarity=0.201 Sum_probs=31.4
Q ss_pred CCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccCCeEEccCCCccc
Q 040421 125 IKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHEID 176 (407)
Q Consensus 125 ~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~ 176 (407)
.+||.++++||+++.... .....+... ..+......+|+++++||||..
T Consensus 40 ~~~d~lii~GDl~~~~~~--~~~~~~~~~-~~~~~~~~~~~v~~i~GNHD~~ 88 (172)
T cd07391 40 YGPERLIILGDLKHSFGG--LSRQEFEEV-AFLRLLAKDVDVILIRGNHDGG 88 (172)
T ss_pred cCCCEEEEeCcccccccc--cCHHHHHHH-HHHHhccCCCeEEEEcccCccc
Confidence 489999999999965321 111222221 1233334568999999999984
|
This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro |
| >PHA02239 putative protein phosphatase | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.00014 Score=65.92 Aligned_cols=72 Identities=14% Similarity=0.208 Sum_probs=41.6
Q ss_pred cEEEEEecCCCCCCch-hhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccCCeEEccCCCccc
Q 040421 99 YTFGLIGDLGQTYYSN-RTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHEID 176 (407)
Q Consensus 99 ~~f~~~gD~~~~~~~~-~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~ 176 (407)
++++++||.|...... +.++.+.......|.++++||++..... .. +....+++.+....++++++||||..
T Consensus 1 m~~~~IsDIHG~~~~l~~ll~~i~~~~~~~d~li~lGD~iDrG~~---s~---~v~~~l~~~~~~~~~~~~l~GNHE~~ 73 (235)
T PHA02239 1 MAIYVVPDIHGEYQKLLTIMDKINNERKPEETIVFLGDYVDRGKR---SK---DVVNYIFDLMSNDDNVVTLLGNHDDE 73 (235)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHhhcCCCCCEEEEecCcCCCCCC---hH---HHHHHHHHHhhcCCCeEEEECCcHHH
Confidence 4789999999653222 2223332221135999999999964321 11 11222222222345899999999974
|
|
| >cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.00022 Score=63.54 Aligned_cols=63 Identities=19% Similarity=0.107 Sum_probs=39.8
Q ss_pred EEEEEecCCCCCCchhhHHHhhhC---CCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccCCeEEccCCCccc
Q 040421 100 TFGLIGDLGQTYYSNRTLTHYELN---PIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHEID 176 (407)
Q Consensus 100 ~f~~~gD~~~~~~~~~~l~~~~~~---~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~ 176 (407)
|++++||+|.... .+.++.+. ..++|.++++||+++... .. .+..+.+. . .+++++.||||..
T Consensus 2 ri~~isDiHg~~~---~l~~~l~~~~~~~~~d~~~~~GD~v~~g~----~~---~~~~~~l~---~-~~~~~v~GNhe~~ 67 (207)
T cd07424 2 RDFVVGDIHGHYS---LLQKALDAVGFDPARDRLISVGDLIDRGP----ES---LACLELLL---E-PWFHAVRGNHEQM 67 (207)
T ss_pred CEEEEECCCCCHH---HHHHHHHHcCCCCCCCEEEEeCCcccCCC----CH---HHHHHHHh---c-CCEEEeECCChHH
Confidence 6899999996543 33333221 126899999999996432 11 12233332 2 4689999999974
|
PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all |
| >PRK00166 apaH diadenosine tetraphosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.00026 Score=65.52 Aligned_cols=68 Identities=24% Similarity=0.320 Sum_probs=42.3
Q ss_pred cEEEEEecCCCCCCchhh-HHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccCCeEEccCCCccc
Q 040421 99 YTFGLIGDLGQTYYSNRT-LTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHEID 176 (407)
Q Consensus 99 ~~f~~~gD~~~~~~~~~~-l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~ 176 (407)
++++++||+|........ ++++.-+ .+.|.++++||++.... +. .+..+.+..+ ..++++++||||..
T Consensus 1 M~~~vIGDIHG~~~~l~~ll~~~~~~-~~~D~li~lGDlVdrGp----~s---~~vl~~l~~l--~~~~~~VlGNHD~~ 69 (275)
T PRK00166 1 MATYAIGDIQGCYDELQRLLEKIDFD-PAKDTLWLVGDLVNRGP----DS---LEVLRFVKSL--GDSAVTVLGNHDLH 69 (275)
T ss_pred CcEEEEEccCCCHHHHHHHHHhcCCC-CCCCEEEEeCCccCCCc----CH---HHHHHHHHhc--CCCeEEEecChhHH
Confidence 468999999976543332 2222212 26799999999996432 11 2233333333 34688999999984
|
|
| >PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.0019 Score=68.27 Aligned_cols=47 Identities=21% Similarity=0.158 Sum_probs=28.2
Q ss_pred CCCCeEEEEeeccccccCCCCCCCChhHHHHHHHHHHhCCCcEEEecccccc
Q 040421 247 SETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAY 298 (407)
Q Consensus 247 ~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y 298 (407)
..+..||++.|..+-...... ..+... ..|.+--+||++|.||.|..
T Consensus 308 ~GaDvIIaLsH~G~~~d~~~~--~~En~~---~~LA~v~GIDaIvgGHsH~~ 354 (814)
T PRK11907 308 AGADIVLVLSHSGIGDDQYEV--GEENVG---YQIASLSGVDAVVTGHSHAE 354 (814)
T ss_pred cCCCEEEEEeCCCcccccccc--cccchh---hHHhcCCCCCEEEECCCCCc
Confidence 467899999998864321110 111111 12323358999999999984
|
|
| >TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.00043 Score=62.24 Aligned_cols=70 Identities=20% Similarity=0.251 Sum_probs=46.4
Q ss_pred cEEEEEecCCCCCCc--------------hhhHHHhh---hCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhh
Q 040421 99 YTFGLIGDLGQTYYS--------------NRTLTHYE---LNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNA 161 (407)
Q Consensus 99 ~~f~~~gD~~~~~~~--------------~~~l~~~~---~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~ 161 (407)
-+.++++|.|.+... .+.++++. +. .+||.+|++||+...... ...++.+.+.++.+
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~-~~~d~vIi~GDl~h~~~~----~~~~~~~~~~l~~~- 88 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADK-YGIEALIINGDLKHEFKK----GLEWRFIREFIEVT- 88 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhh-cCCCEEEEcCccccccCC----hHHHHHHHHHHHhc-
Confidence 467899999987421 12344333 33 379999999999965331 13455555555553
Q ss_pred ccCCeEEccCCCcc
Q 040421 162 AYQPWIWTVGNHEI 175 (407)
Q Consensus 162 ~~~P~~~~~GNHD~ 175 (407)
..+++.++||||.
T Consensus 89 -~~~v~~V~GNHD~ 101 (225)
T TIGR00024 89 -FRDLILIRGNHDA 101 (225)
T ss_pred -CCcEEEECCCCCC
Confidence 3599999999996
|
Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal. |
| >PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.0019 Score=72.01 Aligned_cols=48 Identities=17% Similarity=0.173 Sum_probs=30.6
Q ss_pred CCCCeEEEEeeccccccCCCCCCCChhHHHHHHHHHHh-CCCcEEEeccccccc
Q 040421 247 SETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVE-YKVDVVFAAHVHAYE 299 (407)
Q Consensus 247 ~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~-~~vdlvl~GH~H~y~ 299 (407)
.++..+|++.|...-..... ...+ .....|.++ -+||++|.||.|..-
T Consensus 233 ~gaDvII~l~H~G~~~~~~~--~~~e---n~~~~la~~~~gID~Il~GHsH~~~ 281 (1163)
T PRK09419 233 GGADVIVALAHSGIESEYQS--SGAE---DSVYDLAEKTKGIDAIVAGHQHGLF 281 (1163)
T ss_pred cCCCEEEEEeccCcCCCCCC--CCcc---hHHHHHHHhCCCCcEEEeCCCcccc
Confidence 46789999999986432211 1111 122345544 389999999999864
|
|
| >COG1692 Calcineurin-like phosphoesterase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.042 Score=48.92 Aligned_cols=194 Identities=19% Similarity=0.252 Sum_probs=104.9
Q ss_pred cEEEEEecCCCCCCc---hhhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccCCeEEccCCCcc
Q 040421 99 YTFGLIGDLGQTYYS---NRTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHEI 175 (407)
Q Consensus 99 ~~f~~~gD~~~~~~~---~~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~ 175 (407)
+|++++||+=..... ..-|..+.++ -++||+|..|-++-.. ..-.|+.+..+++. .+- +.++|||=|
T Consensus 1 mriLfiGDvvGk~Gr~~v~~~Lp~lk~k-yk~dfvI~N~ENaa~G-----~Git~k~y~~l~~~---G~d-viT~GNH~w 70 (266)
T COG1692 1 MRILFIGDVVGKPGRKAVKEHLPQLKSK-YKIDFVIVNGENAAGG-----FGITEKIYKELLEA---GAD-VITLGNHTW 70 (266)
T ss_pred CeEEEEecccCcchHHHHHHHhHHHHHh-hcCcEEEEcCccccCC-----cCCCHHHHHHHHHh---CCC-EEecccccc
Confidence 589999998654432 1234445555 4899999999998532 12344555555442 233 458999998
Q ss_pred ccCCCCCCcccccccccccccCCCCCC-CCCCeEEEEecCcEEEEEEecccc--CC-CChHHHHHHHHhccccCCCCCCe
Q 040421 176 DFAPQLGEAIPFKPFANRFHLPYRAPY-STAPFWYSIRRASAHIIVMSCYSA--FG-KYTPQYKWLEKEFPKVNRSETPW 251 (407)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~f~~P~~~~~-~~~~~~ysf~~g~v~fi~Lds~~~--~~-~~~~Q~~WL~~~L~~~~~~~~~~ 251 (407)
... .. ..|..-..++--|.|-+. ..+..|.-|+..+.++.+++-... .. ..+.-+.-+++.|...+ .+.+.
T Consensus 71 d~~-ei---~~~i~~~~~ilRP~N~p~~~~G~G~~~f~~ng~ki~V~Nl~Grv~m~~~~d~PF~~~d~l~~~~~-~~~~~ 145 (266)
T COG1692 71 DQK-EI---LDFIDNADRILRPANYPDGTPGKGSRIFKINGKKLAVINLMGRVFMPPALDNPFKAADKLLDEIK-LGTDL 145 (266)
T ss_pred cch-HH---HHHhhcccceeccCCCCCCCCcceEEEEEeCCcEEEEEEeeccccCccccCCHHHHHHHHHHhCc-cCCce
Confidence 521 10 011111122333444322 223456667776766666554211 11 12223444555555532 34578
Q ss_pred EEEEeeccccccCCCCCCCChhHHHHHHHHHHhCCCcEEEeccccccccccccccceeeccCCcccccCCCCCceEEE-e
Q 040421 252 LIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAYERSERMSNIAYNVTNALCSPVSDQSAPVYIT-I 330 (407)
Q Consensus 252 ~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~g~~~iv-~ 330 (407)
+||-+|.-.-+... +| -++-+-+|.+|+.=|+|.-..-..+ -++|+-||. .
T Consensus 146 iiVDFHAEtTSEK~-----------a~-g~yldGrvsavvGTHTHV~TaD~rI----------------L~~GTayiTDv 197 (266)
T COG1692 146 IIVDFHAETTSEKN-----------AF-GWYLDGRVSAVVGTHTHVPTADERI----------------LPKGTAYITDV 197 (266)
T ss_pred EEEEccccchhhhh-----------hh-heEEcCeEEEEEeccCcccccccee----------------cCCCcEEEecC
Confidence 99999964322111 11 1233457889999999975443332 247788886 4
Q ss_pred CCCCC
Q 040421 331 GDGGN 335 (407)
Q Consensus 331 G~gG~ 335 (407)
|.-|.
T Consensus 198 GMtG~ 202 (266)
T COG1692 198 GMTGP 202 (266)
T ss_pred ccccc
Confidence 44444
|
|
| >cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.00041 Score=63.03 Aligned_cols=71 Identities=24% Similarity=0.283 Sum_probs=42.7
Q ss_pred cEEEEEecCCCCCCchhh-HHHhhhCC--------CCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccCCeEEc
Q 040421 99 YTFGLIGDLGQTYYSNRT-LTHYELNP--------IKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWT 169 (407)
Q Consensus 99 ~~f~~~gD~~~~~~~~~~-l~~~~~~~--------~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~ 169 (407)
.|++++||.|........ ++++.-.+ .+.|.++++||++.... .-.+-.+++..+.....++++
T Consensus 1 ~~i~vigDIHG~~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDrG~-------~s~evl~~l~~l~~~~~~~~v 73 (234)
T cd07423 1 GPFDIIGDVHGCYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDRGP-------DSPEVLRLVMSMVAAGAALCV 73 (234)
T ss_pred CCeEEEEECCCCHHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCCCC-------CHHHHHHHHHHHhhCCcEEEE
Confidence 379999999987543332 23221110 13589999999996422 112233444444333468899
Q ss_pred cCCCccc
Q 040421 170 VGNHEID 176 (407)
Q Consensus 170 ~GNHD~~ 176 (407)
.||||..
T Consensus 74 ~GNHE~~ 80 (234)
T cd07423 74 PGNHDNK 80 (234)
T ss_pred ECCcHHH
Confidence 9999974
|
PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp |
| >PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.00086 Score=61.33 Aligned_cols=71 Identities=18% Similarity=0.218 Sum_probs=40.9
Q ss_pred cEEEEEecCCCCCCchhh-HHHhhhCC-------CCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccCCeEEcc
Q 040421 99 YTFGLIGDLGQTYYSNRT-LTHYELNP-------IKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTV 170 (407)
Q Consensus 99 ~~f~~~gD~~~~~~~~~~-l~~~~~~~-------~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~ 170 (407)
+|++++||+|........ ++++.-.. ..-|.++++||++.... +. .+-.+.+..+.....++++.
T Consensus 1 ~~~~vIGDIHG~~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliDRGp----~S---~~vl~~~~~~~~~~~~~~l~ 73 (245)
T PRK13625 1 MKYDIIGDIHGCYQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDRGP----HS---LRMIEIVWELVEKKAAYYVP 73 (245)
T ss_pred CceEEEEECccCHHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccCCCc----Ch---HHHHHHHHHHhhCCCEEEEe
Confidence 478999999976543222 22221110 13478999999997532 11 11222233333345789999
Q ss_pred CCCccc
Q 040421 171 GNHEID 176 (407)
Q Consensus 171 GNHD~~ 176 (407)
||||..
T Consensus 74 GNHE~~ 79 (245)
T PRK13625 74 GNHCNK 79 (245)
T ss_pred CccHHH
Confidence 999963
|
|
| >PRK09968 serine/threonine-specific protein phosphatase 2; Provisional | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.0007 Score=60.73 Aligned_cols=66 Identities=18% Similarity=0.158 Sum_probs=40.1
Q ss_pred cEEEEEecCCCCCCchhhH-HHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccCCeEEccCCCccc
Q 040421 99 YTFGLIGDLGQTYYSNRTL-THYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHEID 176 (407)
Q Consensus 99 ~~f~~~gD~~~~~~~~~~l-~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~ 176 (407)
-|++++||+|........+ +.+.-. .+.|.++++||++..... . .+..+.+. . ..++.+.||||..
T Consensus 15 ~ri~visDiHg~~~~l~~~l~~~~~~-~~~d~l~~lGD~vdrG~~----~---~~~l~~l~---~-~~~~~v~GNHE~~ 81 (218)
T PRK09968 15 RHIWVVGDIHGEYQLLQSRLHQLSFC-PETDLLISVGDNIDRGPE----S---LNVLRLLN---Q-PWFISVKGNHEAM 81 (218)
T ss_pred CeEEEEEeccCCHHHHHHHHHhcCCC-CCCCEEEECCCCcCCCcC----H---HHHHHHHh---h-CCcEEEECchHHH
Confidence 3899999999764333222 222112 267999999999965321 1 11222222 2 2578899999973
|
|
| >cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0013 Score=56.42 Aligned_cols=42 Identities=21% Similarity=0.234 Sum_probs=28.3
Q ss_pred CCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccCCeEEccCCCccc
Q 040421 125 IKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHEID 176 (407)
Q Consensus 125 ~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~ 176 (407)
.++|.|+++||++.... ... +.+.++.+ ..|++.++||||..
T Consensus 41 ~~~d~vi~~GDl~~~~~-----~~~---~~~~l~~~--~~~~~~v~GNHD~~ 82 (168)
T cd07390 41 GPDDTVYHLGDFSFGGK-----AGT---ELELLSRL--NGRKHLIKGNHDSS 82 (168)
T ss_pred CCCCEEEEeCCCCCCCC-----hHH---HHHHHHhC--CCCeEEEeCCCCch
Confidence 47899999999996422 111 13333332 35899999999974
|
This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d |
| >PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.023 Score=60.23 Aligned_cols=47 Identities=21% Similarity=0.196 Sum_probs=28.4
Q ss_pred CCCCeEEEEeeccccccCCCCCCCChhHHHHHHHHHHhC-CCcEEEeccccccc
Q 040421 247 SETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEY-KVDVVFAAHVHAYE 299 (407)
Q Consensus 247 ~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~-~vdlvl~GH~H~y~ 299 (407)
..+..+|++.|..+-.... ..+.+. .-. .+++. +||++|.||.|..-
T Consensus 243 ~GaDvIIaLsH~G~~~d~~---~~~~en--a~~-~l~~v~gID~IlgGHsH~~~ 290 (780)
T PRK09418 243 EGADVIVALAHSGVDKSGY---NVGMEN--ASY-YLTEVPGVDAVLMGHSHTEV 290 (780)
T ss_pred cCCCEEEEEeccCcccccc---cccchh--hhH-HHhcCCCCCEEEECCCCCcc
Confidence 4577899999987643211 111111 111 13443 89999999999764
|
|
| >PRK11439 pphA serine/threonine protein phosphatase 1; Provisional | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.0011 Score=59.59 Aligned_cols=66 Identities=21% Similarity=0.181 Sum_probs=40.1
Q ss_pred cEEEEEecCCCCCCchh-hHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccCCeEEccCCCccc
Q 040421 99 YTFGLIGDLGQTYYSNR-TLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHEID 176 (407)
Q Consensus 99 ~~f~~~gD~~~~~~~~~-~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~ 176 (407)
-|++++||.|....... .++++... .+.|-++++||++.... +. .+-.+.+.. ..++.+.||||..
T Consensus 17 ~ri~vigDIHG~~~~L~~lL~~i~~~-~~~D~li~lGDlvDrGp----~s---~~vl~~l~~----~~~~~v~GNHE~~ 83 (218)
T PRK11439 17 RHIWLVGDIHGCFEQLMRKLRHCRFD-PWRDLLISVGDLIDRGP----QS---LRCLQLLEE----HWVRAVRGNHEQM 83 (218)
T ss_pred CeEEEEEcccCCHHHHHHHHHhcCCC-cccCEEEEcCcccCCCc----CH---HHHHHHHHc----CCceEeeCchHHH
Confidence 38999999998654332 23333222 25789999999996532 11 112222222 2467899999964
|
|
| >KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.0038 Score=58.12 Aligned_cols=177 Identities=20% Similarity=0.217 Sum_probs=94.7
Q ss_pred cEEEEEecCCCCCCc-hhhHHHhhhC-CCCCceEEEcCCccccCCCCC----CCchhhhHHHHHHh----hhhccCCeEE
Q 040421 99 YTFGLIGDLGQTYYS-NRTLTHYELN-PIKGQTVLFVGDLSYADDYPF----HDNNRWDTWGRFIE----RNAAYQPWIW 168 (407)
Q Consensus 99 ~~f~~~gD~~~~~~~-~~~l~~~~~~-~~~~d~vl~~GD~~y~~~~~~----~~~~~~~~~~~~~~----~~~~~~P~~~ 168 (407)
+|++|-|++|..-+. ..++..+.+. ..+.|++|++||.-.-.+... .-...+..+..+++ ...+.+|.++
T Consensus 1 MrIaVqGCcHG~Ld~iYkti~~~ek~~~tkVDLLlccGDFQavRn~~D~~siavPpKy~~m~~F~~YYsge~~APVlTIF 80 (456)
T KOG2863|consen 1 MRIAVQGCCHGELDNIYKTISLIEKRGNTKVDLLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKYYSGEIKAPVLTIF 80 (456)
T ss_pred CceeeecccchhHHHHHHHHHHHHHcCCCCccEEEEccchHhhcchhhcccccCCHHHHHHHHHHHHhCCcccCceeEEE
Confidence 589999999976432 3444544433 147899999999854322110 01223333333332 3456788899
Q ss_pred ccCCCccccCCCCCCcccccccccccccCCCCCCCCCCeEE-----EEecCcEEEEEEecc---ccCCC-------C---
Q 040421 169 TVGNHEIDFAPQLGEAIPFKPFANRFHLPYRAPYSTAPFWY-----SIRRASAHIIVMSCY---SAFGK-------Y--- 230 (407)
Q Consensus 169 ~~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~y-----sf~~g~v~fi~Lds~---~~~~~-------~--- 230 (407)
+=||||.. +|. ..+|..|= ...+.|| ...+|++|+-.|..- .+|.. +
T Consensus 81 IGGNHEAs------------nyL--~eLpyGGw-VApNIyYlG~agVv~~~gvRIggiSGI~k~~dy~kgh~E~ppyn~s 145 (456)
T KOG2863|consen 81 IGGNHEAS------------NYL--QELPYGGW-VAPNIYYLGYAGVVNFGGVRIGGISGIYKEHDYRKGHFEWPPYNNS 145 (456)
T ss_pred ecCchHHH------------HHH--HhcccCce-eccceEEeeecceEEECCEEEeeccchhhhhhcccCCCCCCCccch
Confidence 99999973 121 11222110 0112333 356789999988862 22211 0
Q ss_pred -------hHHHHHHHHhccccCCCCCCeEEEEeeccccccCCCCCCCCh-------hH----------HHHHHHHHHhCC
Q 040421 231 -------TPQYKWLEKEFPKVNRSETPWLIVLMHCPLYNSYVHHYMEGE-------PM----------RVLYEPWFVEYK 286 (407)
Q Consensus 231 -------~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~-------~~----------~~~l~~l~~~~~ 286 (407)
-.+.+= ..|++ -+.+--|.++|.=+-+-.. +++.. -+ ...++.||++-+
T Consensus 146 tiRsiYHvR~~dV--~~Lkq---lk~piDIfLSHDWP~GI~~--yGd~~~LLr~KPFFrqeie~~~LGSp~~~eLL~~Lk 218 (456)
T KOG2863|consen 146 TIRSIYHVRISDV--AKLKQ---LKHPIDIFLSHDWPRGIYY--YGDKKQLLRLKPFFRQEIEEGKLGSPALEELLEDLK 218 (456)
T ss_pred hhhhhhhhhhhhh--HHHHh---hcCcceEEeecCCCcchhh--cCCHHHHHhcCcHHHHHHhcCCcCChHHHHHHHHhC
Confidence 112221 12222 1234457777754322111 11111 01 235678999999
Q ss_pred CcEEEeccccc
Q 040421 287 VDVVFAAHVHA 297 (407)
Q Consensus 287 vdlvl~GH~H~ 297 (407)
...+|+.|.|.
T Consensus 219 P~yWfsAHLH~ 229 (456)
T KOG2863|consen 219 PQYWFSAHLHV 229 (456)
T ss_pred cchhhhhhHhh
Confidence 99999999996
|
|
| >cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.016 Score=52.99 Aligned_cols=136 Identities=13% Similarity=0.127 Sum_probs=75.3
Q ss_pred EEEEecCCCCCCch-----hhHHHhhh-C---------CCCCceEEEcCCccccCCCCCC---------------Cchhh
Q 040421 101 FGLIGDLGQTYYSN-----RTLTHYEL-N---------PIKGQTVLFVGDLSYADDYPFH---------------DNNRW 150 (407)
Q Consensus 101 f~~~gD~~~~~~~~-----~~l~~~~~-~---------~~~~d~vl~~GD~~y~~~~~~~---------------~~~~~ 150 (407)
+++++|.+.+.... +.+..++. + ..+..-+|++||.+...+.... .....
T Consensus 2 i~~vSgL~ig~~~~~~~~l~ll~d~L~G~~g~~~~~~~~s~I~rlIIaGn~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (257)
T cd07387 2 IALVSGLGLGGNAESSLSLQLLVDWLTGQLGDEEEQSSASSIVRLIIAGNSLSKSTQGKDSQTKARYLTKKSSAASVEAV 81 (257)
T ss_pred EEEEcccccCCCccchHHHHHHHHHhcCCCCCccccccccceEEEEEECCcccccccccchhhhhhccccccchhhHHHH
Confidence 67889998775421 22222221 1 1244579999999975431100 02234
Q ss_pred hHHHHHHhhhhccCCeEEccCCCccccCCCCCCcccccccccccccCCCC----CCCCCCeEEEEecCcEEEEEEeccc-
Q 040421 151 DTWGRFIERNAAYQPWIWTVGNHEIDFAPQLGEAIPFKPFANRFHLPYRA----PYSTAPFWYSIRRASAHIIVMSCYS- 225 (407)
Q Consensus 151 ~~~~~~~~~~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~----~~~~~~~~ysf~~g~v~fi~Lds~~- 225 (407)
+.+.+++..+...+|+...|||||-.. .... +.++.. ..| |... -....|. |.|++++++|++.....
T Consensus 82 ~~ld~~l~~l~~~i~V~imPG~~Dp~~-~~lP-Qqplh~--~lf--p~s~~~~~~~~vtNP-~~~~i~g~~vLgtsGqni 154 (257)
T cd07387 82 KELDNFLSQLASSVPVDLMPGEFDPAN-HSLP-QQPLHR--CLF--PKSSNYSTLNLVTNP-YEFSIDGVRVLGTSGQNV 154 (257)
T ss_pred HHHHHHHHhhhcCCeEEECCCCCCccc-ccCC-CCCCCH--HHh--hcccccCCcEEeCCC-eEEEECCEEEEEECCCCH
Confidence 455667777888999999999999742 1111 111100 011 1100 0011122 56888999999988753
Q ss_pred ----cCCCChHHHHHHHHhccc
Q 040421 226 ----AFGKYTPQYKWLEKEFPK 243 (407)
Q Consensus 226 ----~~~~~~~Q~~WL~~~L~~ 243 (407)
.+...+.-++.|++.|+.
T Consensus 155 ~Di~ky~~~~~~l~~me~~L~w 176 (257)
T cd07387 155 DDILKYSSLESRLDILERTLKW 176 (257)
T ss_pred HHHHHhCCCCCHHHHHHHHHHh
Confidence 133444557778887764
|
PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily |
| >cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.0017 Score=59.49 Aligned_cols=65 Identities=23% Similarity=0.291 Sum_probs=40.1
Q ss_pred EEEecCCCCCCchhh-HHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccCCeEEccCCCccc
Q 040421 102 GLIGDLGQTYYSNRT-LTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHEID 176 (407)
Q Consensus 102 ~~~gD~~~~~~~~~~-l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~ 176 (407)
.++||.|......+. ++++.-+ .+.|.++++||++.... + -.+..+++..+. ..+..++||||..
T Consensus 2 yvIGDIHG~~~~L~~LL~~i~~~-~~~D~Li~lGDlVdRGp----~---s~evl~~l~~l~--~~v~~VlGNHD~~ 67 (257)
T cd07422 2 YAIGDIQGCYDELQRLLEKINFD-PAKDRLWLVGDLVNRGP----D---SLETLRFVKSLG--DSAKTVLGNHDLH 67 (257)
T ss_pred EEEECCCCCHHHHHHHHHhcCCC-CCCCEEEEecCcCCCCc----C---HHHHHHHHHhcC--CCeEEEcCCchHH
Confidence 579999986543332 2333222 25799999999996532 1 122334444332 3678999999984
|
ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa |
| >TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.0064 Score=63.18 Aligned_cols=46 Identities=17% Similarity=0.236 Sum_probs=28.0
Q ss_pred CCCCeEEEEeeccccccCCCCCCCChhHHHHHHHHHHh-CCCcEEEecccccc
Q 040421 247 SETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVE-YKVDVVFAAHVHAY 298 (407)
Q Consensus 247 ~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~-~~vdlvl~GH~H~y 298 (407)
..+..+|++.|...-...... ..+... ..+.+ -+||++|+||.|..
T Consensus 194 ~gaDvII~LsH~G~~~d~~~~--~~en~~----~~l~~v~gID~Il~GHsH~~ 240 (626)
T TIGR01390 194 KGADIIVALAHSGISADPYQP--GAENSA----YYLTKVPGIDAVLFGHSHAV 240 (626)
T ss_pred cCCCEEEEEeccCcCCCcccc--ccchHH----HHHhcCCCCCEEEcCCCCcc
Confidence 457799999998864321100 111111 12344 38999999999974
|
2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a |
| >cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.0021 Score=57.81 Aligned_cols=69 Identities=19% Similarity=0.244 Sum_probs=40.1
Q ss_pred EEEEecCCCCCCchh-hHHHhhhCC------CCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccCCeEEccCCC
Q 040421 101 FGLIGDLGQTYYSNR-TLTHYELNP------IKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNH 173 (407)
Q Consensus 101 f~~~gD~~~~~~~~~-~l~~~~~~~------~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNH 173 (407)
+.++||+|....... .++++.... ...|.++++||++.... +. .+-.+.+..+...-.++.+.|||
T Consensus 1 ~~vIGDIHG~~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDRGp----~S---~~vl~~l~~l~~~~~~~~l~GNH 73 (222)
T cd07413 1 YDFIGDIHGHAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDRGP----EI---RELLEIVKSMVDAGHALAVMGNH 73 (222)
T ss_pred CEEEEeccCCHHHHHHHHHHcCCCccccccCCCCCEEEEeCcccCCCC----CH---HHHHHHHHHhhcCCCEEEEEccC
Confidence 357999998654332 223322110 13579999999996532 11 22233333333334688999999
Q ss_pred ccc
Q 040421 174 EID 176 (407)
Q Consensus 174 D~~ 176 (407)
|..
T Consensus 74 E~~ 76 (222)
T cd07413 74 EFN 76 (222)
T ss_pred cHH
Confidence 974
|
PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of |
| >cd07381 MPP_CapA CapA and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.013 Score=53.29 Aligned_cols=61 Identities=16% Similarity=0.224 Sum_probs=37.2
Q ss_pred HHHHhccccCCCCCCeEEEEeeccccccCCCCCCCChhHHHHHHHHHHhCCCcEEEecccccccccc
Q 040421 236 WLEKEFPKVNRSETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAYERSE 302 (407)
Q Consensus 236 WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~ 302 (407)
-+++.++++. .++..+||+.|...-.. ......+..+...+.+.++|+|+.||.|..+-..
T Consensus 163 ~~~~~i~~lr-~~~D~vIv~~H~G~e~~-----~~p~~~~~~la~~l~~~G~D~IiG~H~Hv~q~~E 223 (239)
T cd07381 163 RIAADIAEAK-KKADIVIVSLHWGVEYS-----YYPTPEQRELARALIDAGADLVIGHHPHVLQGIE 223 (239)
T ss_pred HHHHHHHHHh-hcCCEEEEEecCcccCC-----CCCCHHHHHHHHHHHHCCCCEEEcCCCCcCCCeE
Confidence 3444444432 23779999999754211 1112233355555556799999999999887543
|
CapA is one of three membrane-associated enzymes in Bacillus anthracis that is required for synthesis of gamma-polyglutamic acid (PGA), a major component of the bacterial capsule. The YwtB and PgsA proteins of Bacillus subtilis are closely related to CapA and are also included in this alignment model. CapA belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal |
| >cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.0023 Score=57.53 Aligned_cols=66 Identities=20% Similarity=0.071 Sum_probs=38.3
Q ss_pred EEecCCCCCCchhhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhc-cCCeEEccCCCccc
Q 040421 103 LIGDLGQTYYSNRTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAA-YQPWIWTVGNHEID 176 (407)
Q Consensus 103 ~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~-~~P~~~~~GNHD~~ 176 (407)
++||+|........+-+.... .+.|.+|++||++.... . ..+....+..+.. ..+++.+.||||..
T Consensus 2 ~igDiHg~~~~l~~~l~~~~~-~~~d~li~lGD~vdrg~----~---~~~~l~~l~~~~~~~~~~~~l~GNHe~~ 68 (225)
T cd00144 2 VIGDIHGCLDDLLRLLEKIGF-PPNDKLIFLGDYVDRGP----D---SVEVIDLLLALKILPDNVILLRGNHEDM 68 (225)
T ss_pred EEeCCCCCHHHHHHHHHHhCC-CCCCEEEEECCEeCCCC----C---cHHHHHHHHHhcCCCCcEEEEccCchhh
Confidence 689999654322222111222 26899999999996532 1 1122233322211 35799999999984
|
The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate |
| >smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.024 Score=51.57 Aligned_cols=50 Identities=22% Similarity=0.258 Sum_probs=32.7
Q ss_pred CCCeEEEEeeccccccCCCCCCCChhHHHHHHHHHHhCCCcEEEecccccccccc
Q 040421 248 ETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAYERSE 302 (407)
Q Consensus 248 ~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~ 302 (407)
++..+||+.|-..-... .....+..+...+.+.++|+|+.||.|..+...
T Consensus 172 ~~D~vIv~~H~G~e~~~-----~p~~~~~~~A~~l~~~G~DvIiG~H~H~~~~~e 221 (239)
T smart00854 172 KADVVIVSLHWGVEYQY-----EPTDEQRELAHALIDAGADVVIGHHPHVLQPIE 221 (239)
T ss_pred cCCEEEEEecCccccCC-----CCCHHHHHHHHHHHHcCCCEEEcCCCCcCCceE
Confidence 57799999997652111 111222344445555799999999999887554
|
This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein. |
| >PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.033 Score=58.13 Aligned_cols=46 Identities=15% Similarity=0.150 Sum_probs=27.5
Q ss_pred CCCCeEEEEeeccccccCCCCCCCChhHHHHHHHHHHh-CCCcEEEecccccc
Q 040421 247 SETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVE-YKVDVVFAAHVHAY 298 (407)
Q Consensus 247 ~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~-~~vdlvl~GH~H~y 298 (407)
..+..+|++.|...-...... ..+.. ... +.+ -+||++|.||.|..
T Consensus 217 ~gaDvII~LsH~G~~~d~~~~--~aen~---~~~-l~~v~gID~Il~GHsH~~ 263 (649)
T PRK09420 217 KGADIVVAIPHSGISADPYKA--MAENS---VYY-LSEVPGIDAIMFGHSHAV 263 (649)
T ss_pred cCCCEEEEEecCCcCCCCccc--cccch---hHH-HhcCCCCCEEEeCCCCcc
Confidence 457799999998763221100 01111 111 233 47999999999975
|
|
| >cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.0037 Score=57.76 Aligned_cols=70 Identities=16% Similarity=0.213 Sum_probs=41.0
Q ss_pred EEEEEecCCCCCCchhh-HHHhhhCC----CCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhcc---CCeEEccC
Q 040421 100 TFGLIGDLGQTYYSNRT-LTHYELNP----IKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAY---QPWIWTVG 171 (407)
Q Consensus 100 ~f~~~gD~~~~~~~~~~-l~~~~~~~----~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~---~P~~~~~G 171 (407)
+++++||+|........ ++.+.+.. ...+.+|++||++.... +. .+..+++..+... ..++++.|
T Consensus 3 ~iyaIGDIHG~~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGP----dS---~eVld~L~~l~~~~~~~~vv~LrG 75 (304)
T cd07421 3 VVICVGDIHGYISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGP----ET---RKVIDFLISLPEKHPKQRHVFLCG 75 (304)
T ss_pred eEEEEEeccCCHHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCC----CH---HHHHHHHHHhhhcccccceEEEec
Confidence 68899999987544332 33333221 13568999999996532 11 2223333333222 24788999
Q ss_pred CCccc
Q 040421 172 NHEID 176 (407)
Q Consensus 172 NHD~~ 176 (407)
|||..
T Consensus 76 NHE~~ 80 (304)
T cd07421 76 NHDFA 80 (304)
T ss_pred CChHH
Confidence 99963
|
Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol |
| >COG1407 Predicted ICC-like phosphoesterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.0064 Score=54.25 Aligned_cols=75 Identities=17% Similarity=0.111 Sum_probs=47.9
Q ss_pred CcEEEEEecCCCCCCc-----------------hhhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhh
Q 040421 98 PYTFGLIGDLGQTYYS-----------------NRTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERN 160 (407)
Q Consensus 98 ~~~f~~~gD~~~~~~~-----------------~~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~ 160 (407)
.-+.++++|.|.+... ...++++++. .+|+-+|.+||+-.+-+. .....|.....+++.+
T Consensus 19 ~~~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~-~~p~~lIilGD~KH~~~~--~~~~e~~~~~~f~~~~ 95 (235)
T COG1407 19 LGRTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIER-YGPKRLIILGDLKHEFGK--SLRQEKEEVREFLELL 95 (235)
T ss_pred cCcEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHh-cCCCEEEEcCccccccCc--cccccHHHHHHHHHHh
Confidence 3478899999987531 1123334454 489999999999876542 1233444434444443
Q ss_pred hccCCeEEccCCCccc
Q 040421 161 AAYQPWIWTVGNHEID 176 (407)
Q Consensus 161 ~~~~P~~~~~GNHD~~ 176 (407)
... -++++.||||-.
T Consensus 96 ~~~-evi~i~GNHD~~ 110 (235)
T COG1407 96 DER-EVIIIRGNHDNG 110 (235)
T ss_pred ccC-cEEEEeccCCCc
Confidence 332 599999999974
|
|
| >TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical) | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.005 Score=56.73 Aligned_cols=67 Identities=24% Similarity=0.299 Sum_probs=40.5
Q ss_pred EEEEEecCCCCCCchhh-HHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccCCeEEccCCCccc
Q 040421 100 TFGLIGDLGQTYYSNRT-LTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHEID 176 (407)
Q Consensus 100 ~f~~~gD~~~~~~~~~~-l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~ 176 (407)
+..++||.|........ ++++.-+ ...|-++++||++.... + -.+-.+++..+. ..+..+.||||..
T Consensus 2 ~~YvIGDIHGc~daL~~LL~~i~f~-~~~D~l~~lGDlVdRGP----~---slevL~~l~~l~--~~~~~VlGNHD~~ 69 (279)
T TIGR00668 2 ATYLIGDLHGCYDELQALLERVEFD-PGQDTLWLTGDLVARGP----G---SLEVLRYVKSLG--DAVRLVLGNHDLH 69 (279)
T ss_pred cEEEEEcccCCHHHHHHHHHHhCcC-CCCCEEEEeCCccCCCC----C---HHHHHHHHHhcC--CCeEEEEChhHHH
Confidence 46789999987544333 3333223 25689999999997532 1 122233343332 2356899999973
|
Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase. |
| >KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.049 Score=44.43 Aligned_cols=85 Identities=14% Similarity=0.219 Sum_probs=54.7
Q ss_pred HHHHHHHhCCCcEEEeccccccccccccccceeeccCCcccccCCCCCceEEEeCCCCCCCCCcccCCCCCCCccceeeC
Q 040421 277 LYEPWFVEYKVDVVFAAHVHAYERSERMSNIAYNVTNALCSPVSDQSAPVYITIGDGGNQEGLAKEMTEPQPRYSAYREA 356 (407)
Q Consensus 277 ~l~~l~~~~~vdlvl~GH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~g~~~iv~G~gG~~~~~~~~~~~~~p~~~~~~~~ 356 (407)
.|.-|-++.+||+.+.||+|.++... .+|-.||--|++-.... ..+..+ .
T Consensus 98 sL~~LaRqldvDILl~G~Th~f~Aye-------------------~eg~ffvnPGSaTGAfn----~~~t~~-------~ 147 (183)
T KOG3325|consen 98 SLALLARQLDVDILLTGHTHKFEAYE-------------------HEGKFFVNPGSATGAFN----VSDTDI-------I 147 (183)
T ss_pred HHHHHHHhcCCcEEEeCCceeEEEEE-------------------eCCcEEeCCCcccCCCc----ccccCC-------C
Confidence 45566777899999999999998775 25556777777633211 111111 2
Q ss_pred cceEEEEEEeeccEEEEEEEEcCCCceeeeeeEEEEe
Q 040421 357 SFGHGILDVKNRTHAYFGWHRNQDDYAVEADSVWLHN 393 (407)
Q Consensus 357 ~~Gf~~l~v~~~~~~~~~~~~~~~g~~~~~D~~~i~~ 393 (407)
.+-|..|++...+.+.+- ++--||+|- .|.+...|
T Consensus 148 ~PSFvLmDiqg~~~v~Yv-Y~lidgeVk-Vdki~ykK 182 (183)
T KOG3325|consen 148 VPSFVLMDIQGSTVVTYV-YRLIDGEVK-VDKIEYKK 182 (183)
T ss_pred CCceEEEEecCCEEEEEE-eeeeCCcEE-EEEEEecC
Confidence 467999999655544333 344578874 78877654
|
|
| >PF00041 fn3: Fibronectin type III domain; InterPro: IPR003961 Fibronectins are multi-domain glycoproteins found in a soluble form in plasma, and in an insoluble form in loose connective tissue and basement membranes [] | Back alignment and domain information |
|---|
Probab=96.13 E-value=0.015 Score=42.91 Aligned_cols=66 Identities=26% Similarity=0.302 Sum_probs=41.7
Q ss_pred eeccCCCCCcEEEEEEcCCCC----CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 3 ITQGDHEGKGVIVSWVTPDEP----GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
|.+.....+++.|.|..+... ..-.|+|....+... ... .... .-...++|.+|+|+|.|.++|..
T Consensus 6 l~v~~~~~~sv~v~W~~~~~~~~~~~~y~v~~~~~~~~~~-~~~---~~~~------~~~~~~~i~~L~p~t~Y~~~v~a 75 (85)
T PF00041_consen 6 LSVSNISPTSVTVSWKPPSSGNGPITGYRVEYRSVNSTSD-WQE---VTVP------GNETSYTITGLQPGTTYEFRVRA 75 (85)
T ss_dssp EEEEEECSSEEEEEEEESSSTSSSESEEEEEEEETTSSSE-EEE---EEEE------TTSSEEEEESCCTTSEEEEEEEE
T ss_pred eEEEECCCCEEEEEEECCCCCCCCeeEEEEEEEeccccee-eee---eeee------eeeeeeeeccCCCCCEEEEEEEE
Confidence 445555678999999998411 234677766654331 111 1111 11236788999999999999975
|
They contain multiple copies of 3 repeat regions (types I, II and III), which bind to a variety of substances including heparin, collagen, DNA, actin, fibrin and fibronectin receptors on cell surfaces. The wide variety of these substances means that fibronectins are involved in a number of important functions: e.g., wound healing; cell adhesion; blood coagulation; cell differentiation and migration; maintenance of the cellular cytoskeleton; and tumour metastasis []. The role of fibronectin in cell differentiation is demonstrated by the marked reduction in the expression of its gene when neoplastic transformation occurs. Cell attachment has been found to be mediated by the binding of the tetrapeptide RGDS to integrins on the cell surface [], although related sequences can also display cell adhesion activity. Plasma fibronectin occurs as a dimer of 2 different subunits, linked together by 2 disulphide bonds near the C terminus. The difference in the 2 chains occurs in the type III repeat region and is caused by alternative splicing of the mRNA from one gene []. The observation that, in a given protein, an individual repeat of one of the 3 types (e.g., the first FnIII repeat) shows much less similarity to its subsequent tandem repeats within that protein than to its equivalent repeat between fibronectins from other species, has suggested that the repeating structure of fibronectin arose at an early stage of evolution. It also seems to suggest that the structure is subject to high selective pressure []. The fibronectin type III repeat region is an approximately 100 amino acid domain, different tandem repeats of which contain binding sites for DNA, heparin and the cell surface []. The superfamily of sequences believed to contain FnIII repeats represents 45 different families, the majority of which are involved in cell surface binding in some manner, or are receptor protein tyrosine kinases, or cytokine receptors.; GO: 0005515 protein binding; PDB: 1UEM_A 1TDQ_A 1X5I_A 2IC2_B 2IBG_C 2IBB_A 3R8Q_A 2FNB_A 1FNH_A 2EDB_A .... |
| >COG5555 Cytolysin, a secreted calcineurin-like phosphatase [Cell motility and secretion] | Back alignment and domain information |
|---|
Probab=95.96 E-value=0.021 Score=51.67 Aligned_cols=172 Identities=15% Similarity=0.157 Sum_probs=94.9
Q ss_pred ceEEEcCCccccCCCCCCC---chhhhHHHHHHh----hhhccCCeEEccCCCccccCCC-----C--CCccccc-cc--
Q 040421 128 QTVLFVGDLSYADDYPFHD---NNRWDTWGRFIE----RNAAYQPWIWTVGNHEIDFAPQ-----L--GEAIPFK-PF-- 190 (407)
Q Consensus 128 d~vl~~GD~~y~~~~~~~~---~~~~~~~~~~~~----~~~~~~P~~~~~GNHD~~~~~~-----~--~~~~~~~-~~-- 190 (407)
--++..||++...+....+ ..+...|...++ +....+|+|.-+||||..-..- + .+...|. .|
T Consensus 128 lGlV~ggDitddgggq~~qprEg~ql~qf~~RYsq~vG~~h~H~PvYvGlgnhdldq~gpph~~DWyRrElrdyve~~Hr 207 (392)
T COG5555 128 LGLVEGGDITDDGGGQSFQPREGNQLKQFELRYSQDVGNIHMHYPVYVGLGNHDLDQKGPPHSLDWYRRELRDYVENYHR 207 (392)
T ss_pred eeEEeecceeccCCCcccCccccchhhchHhhhccCCCCceeeeeeEeccCchhhcccCCCCchhHHHHHHHHHHHhhcC
Confidence 3467788999876643322 222333322222 2334589999999999853210 0 0000000 00
Q ss_pred ccccccCCCCCC--CCCCeEEEEecCcEEEEEEecccc-CCC-ChHHHHHHHHhccccCCCCCCeEEEEeeccc--cccC
Q 040421 191 ANRFHLPYRAPY--STAPFWYSIRRASAHIIVMSCYSA-FGK-YTPQYKWLEKEFPKVNRSETPWLIVLMHCPL--YNSY 264 (407)
Q Consensus 191 ~~~f~~P~~~~~--~~~~~~ysf~~g~v~fi~Lds~~~-~~~-~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~--~~~~ 264 (407)
...|.-|.-.+. ..-...||++.|++|.+-+-.... -.. ...-+-||+.+|...... .+-++++.|.-. +++.
T Consensus 208 ~~vf~Kppvp~atYd~l~d~ySwdwgglhlvh~hrf~Gd~~~ga~sslpwlk~dl~~~aad-grpv~LfqhyGwdtfste 286 (392)
T COG5555 208 SDVFWKPPVPPATYDQLKDRYSWDWGGLHLVHYHRFIGDAEPGANSSLPWLKVDLIYSAAD-GRPVYLFQHYGWDTFSTE 286 (392)
T ss_pred cCcccCCCCCcccccccchheeccccceeEEEEeeeccccCCCccccCcceeccceeeccC-CCceeehhhhCccceecc
Confidence 111111111111 122456899999998887765211 011 123467999999875433 345888888865 3322
Q ss_pred CCCC--------C------CChhHHHHHHHHHHhCCCcEEEecccccccc
Q 040421 265 VHHY--------M------EGEPMRVLYEPWFVEYKVDVVFAAHVHAYER 300 (407)
Q Consensus 265 ~~~~--------~------~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r 300 (407)
.++. + .....|..+...++-|+|...+.||.|.+..
T Consensus 287 awdpAsrT~Dd~Gsgaphww~a~er~all~~lqGYNvvg~fhGhkhd~~m 336 (392)
T COG5555 287 AWDPASRTLDDTGSGAPHWWPAPERGALLFFLQGYNVVGTFHGHKHDFNM 336 (392)
T ss_pred ccCchhcccccCCCCCCCCCCCCCcchHHHhhcCceeEEeccccccccce
Confidence 2110 0 1134577888889999999999999998743
|
|
| >KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=95.77 E-value=0.024 Score=55.81 Aligned_cols=45 Identities=16% Similarity=0.073 Sum_probs=33.4
Q ss_pred CCCcEEEEEecCCCCCCc---------hhhHHH---hhhCCCCCceEEEcCCccccCC
Q 040421 96 DVPYTFGLIGDLGQTYYS---------NRTLTH---YELNPIKGQTVLFVGDLSYADD 141 (407)
Q Consensus 96 ~~~~~f~~~gD~~~~~~~---------~~~l~~---~~~~~~~~d~vl~~GD~~y~~~ 141 (407)
...+||++..|.|.++.. ..++.. ++++ .+.|+||.+||++.++.
T Consensus 11 entirILVaTD~HlGY~EkD~vrg~DSf~tFeEIl~iA~e-~~VDmiLlGGDLFHeNk 67 (646)
T KOG2310|consen 11 ENTIRILVATDNHLGYGEKDAVRGDDSFVTFEEILEIAQE-NDVDMILLGGDLFHENK 67 (646)
T ss_pred ccceEEEEeecCccccccCCcccccchHHHHHHHHHHHHh-cCCcEEEecCcccccCC
Confidence 368999999999998642 233333 3444 48999999999998765
|
|
| >cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.77 E-value=0.017 Score=54.68 Aligned_cols=70 Identities=16% Similarity=0.031 Sum_probs=38.7
Q ss_pred EEEEEecCCCCCCchhhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhh--ccCCeEEccCCCccc
Q 040421 100 TFGLIGDLGQTYYSNRTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNA--AYQPWIWTVGNHEID 176 (407)
Q Consensus 100 ~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~--~~~P~~~~~GNHD~~ 176 (407)
++.++||+|........+-+....+...+-+|++||++.... ...+. ..++-.+. ..--++.+.||||..
T Consensus 52 ~~~vvGDiHG~~~dL~~il~~~g~~~~~~~~lFLGDyVDRG~------~s~Ev-l~ll~~lk~~~p~~v~llRGNHE~~ 123 (321)
T cd07420 52 QVTICGDLHGKLDDLFLIFYKNGLPSPENPYVFNGDFVDRGK------RSIEI-LIILFAFFLVYPNEVHLNRGNHEDH 123 (321)
T ss_pred CeEEEEeCCCCHHHHHHHHHHcCCCCccceEEEeccccCCCC------CcHHH-HHHHHHHhhcCCCcEEEecCchhhh
Confidence 678999999865432222111112112367999999997532 11122 22222222 123488899999985
|
RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all |
| >KOG4419 consensus 5' nucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.67 E-value=0.076 Score=53.17 Aligned_cols=182 Identities=15% Similarity=0.115 Sum_probs=90.4
Q ss_pred CCCcEEEEEecCCCCCCc-------------h----hhHHHhhhCCCCCce-EEEcCCccccCCCCCCC--chhhhHHHH
Q 040421 96 DVPYTFGLIGDLGQTYYS-------------N----RTLTHYELNPIKGQT-VLFVGDLSYADDYPFHD--NNRWDTWGR 155 (407)
Q Consensus 96 ~~~~~f~~~gD~~~~~~~-------------~----~~l~~~~~~~~~~d~-vl~~GD~~y~~~~~~~~--~~~~~~~~~ 155 (407)
....+|..-+|+|....+ . ..++++.+. ..+|. ++-+||.-...|+.... +..|..++-
T Consensus 40 ~~~~nf~hTtdthG~~~~h~~~~~~~~~~G~f~~f~~~~k~~a~~-~~~dvl~~dtGD~hdGtg~sd~~~~~g~~t~~l~ 118 (602)
T KOG4419|consen 40 WGQPNFIHTTDTHGWLGSHLRDARYDADFGDFAAFALRMKELADR-KGVDVLLVDTGDLHDGTGLSDATDPPGIYTNFLF 118 (602)
T ss_pred cccccceeeccccccccccccchhhhhhhhhHHHHHHHHHHHHhc-cCCCEEEEecccccCCceeeeccCCchHHHHHHH
Confidence 356788888888765321 1 123344333 35664 56699998776653221 113333322
Q ss_pred HHhhhhccCC-eEEccCCCccccCCCCCCcccccccccccccCCCC-----------CCCCCCeEEEEec-CcEEEEEEe
Q 040421 156 FIERNAAYQP-WIWTVGNHEIDFAPQLGEAIPFKPFANRFHLPYRA-----------PYSTAPFWYSIRR-ASAHIIVMS 222 (407)
Q Consensus 156 ~~~~~~~~~P-~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~-----------~~~~~~~~ysf~~-g~v~fi~Ld 222 (407)
+..| =..++||||.... ..... .+..|...|..|... -......++.|.- .+++...+-
T Consensus 119 ------~~~~yD~l~lGNHEl~~~-~ve~l-~~~~f~~~~k~~~la~Nv~~~~~~~~~~p~~~~~~t~~t~~~~~v~~vG 190 (602)
T KOG4419|consen 119 ------KMMPYDILTLGNHELYQA-NVENL-TEEYFLPAWKGPYLASNVQIFDSSNSFVPFGLEYATFLTPHGVVVLAVG 190 (602)
T ss_pred ------hcCccchhhhcchhhhhh-hhhcc-chhhhhhhhccceeecceEEecCchhhccccccceEEeccCceEEEEEE
Confidence 2233 2458999999532 11100 001122222222111 1122344555532 333332222
Q ss_pred ccc-cCC-----------CChHHHHHHHHhccccCCCCCCeEEEEeeccccccCCCCCCCChhHHHHHHHHHHh-C-CCc
Q 040421 223 CYS-AFG-----------KYTPQYKWLEKEFPKVNRSETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVE-Y-KVD 288 (407)
Q Consensus 223 s~~-~~~-----------~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~-~-~vd 288 (407)
.-. .++ ..-.|.+|-.+.++. .+.+-+++++|.|.-... .++.+...+.+ + +++
T Consensus 191 ~~~~~f~~~~n~~~v~~veei~~~~~~~~m~~~---~~idlii~lgH~~~~~~~---------e~~~~~~~ir~~~p~t~ 258 (602)
T KOG4419|consen 191 FLCASFSGAANRTVVVPVEEITQSEWEQDMVNT---TDIDLIIALGHSPVRDDD---------EWKSLHAEIRKVHPNTP 258 (602)
T ss_pred EeeccccccCCCcccccHHHHhccchHHHHhhc---cCccEEEEecccccccch---------hhhhHHHHHhhhCCCCc
Confidence 110 111 113467787777776 567789999999853211 11223333444 4 678
Q ss_pred E-EEecccccc
Q 040421 289 V-VFAAHVHAY 298 (407)
Q Consensus 289 l-vl~GH~H~y 298 (407)
+ ||.||.|..
T Consensus 259 IqviGGHshir 269 (602)
T KOG4419|consen 259 IQVIGGHSHIR 269 (602)
T ss_pred eEEECchhhhh
Confidence 8 999999964
|
|
| >cd07416 MPP_PP2B PP2B, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.61 E-value=0.023 Score=53.58 Aligned_cols=69 Identities=17% Similarity=0.178 Sum_probs=39.2
Q ss_pred EEEEEecCCCCCCchhhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhcc--CCeEEccCCCccc
Q 040421 100 TFGLIGDLGQTYYSNRTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAY--QPWIWTVGNHEID 176 (407)
Q Consensus 100 ~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~--~P~~~~~GNHD~~ 176 (407)
+++++||+|........+-..... ...+-+|++||++..... .-+-...+-.+... .-++.+.||||..
T Consensus 44 ~i~ViGDIHG~~~dL~~l~~~~g~-~~~~~ylFLGDyVDRG~~-------s~Evi~lL~~lki~~p~~v~lLRGNHE~~ 114 (305)
T cd07416 44 PVTVCGDIHGQFYDLLKLFEVGGS-PANTRYLFLGDYVDRGYF-------SIECVLYLWALKILYPKTLFLLRGNHECR 114 (305)
T ss_pred CEEEEEeCCCCHHHHHHHHHhcCC-CCCceEEEECCccCCCCC-------hHHHHHHHHHHHhhcCCCEEEEeCCCcHH
Confidence 588999999765433222222222 144789999999965321 11112222222222 3478899999984
|
PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G |
| >smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain | Back alignment and domain information |
|---|
Probab=95.12 E-value=0.043 Score=50.89 Aligned_cols=69 Identities=13% Similarity=0.055 Sum_probs=39.5
Q ss_pred cEEEEEecCCCCCCchh-hHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhh--ccCCeEEccCCCcc
Q 040421 99 YTFGLIGDLGQTYYSNR-TLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNA--AYQPWIWTVGNHEI 175 (407)
Q Consensus 99 ~~f~~~gD~~~~~~~~~-~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~--~~~P~~~~~GNHD~ 175 (407)
-+++++||.|....... .+... .. ...+-++++||++..... . -+-...+..+. ...-++.+.||||.
T Consensus 28 ~~i~vvGDiHG~~~~l~~ll~~~-~~-~~~~~~vfLGD~VDrG~~----s---~e~l~~l~~lk~~~p~~v~llrGNHE~ 98 (271)
T smart00156 28 APVTVCGDIHGQFDDLLRLFDLN-GP-PPDTNYVFLGDYVDRGPF----S---IEVILLLFALKILYPNRVVLLRGNHES 98 (271)
T ss_pred CCEEEEEeCcCCHHHHHHHHHHc-CC-CCCceEEEeCCccCCCCC----h---HHHHHHHHHHHhcCCCCEEEEeccccH
Confidence 36889999997654332 22222 22 245788999999964321 1 11122222221 22357899999998
Q ss_pred c
Q 040421 176 D 176 (407)
Q Consensus 176 ~ 176 (407)
.
T Consensus 99 ~ 99 (271)
T smart00156 99 R 99 (271)
T ss_pred H
Confidence 4
|
Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members. |
| >PF13277 YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C | Back alignment and domain information |
|---|
Probab=95.07 E-value=0.34 Score=43.80 Aligned_cols=192 Identities=18% Similarity=0.224 Sum_probs=85.7
Q ss_pred EEEecCCCCCCc---hhhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccCCeEEccCCCccccC
Q 040421 102 GLIGDLGQTYYS---NRTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHEIDFA 178 (407)
Q Consensus 102 ~~~gD~~~~~~~---~~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~~~ 178 (407)
+++||.=..... ...|..+.++ .++||||..|.++.. |. . -..+.+.++++ ..+- ..+.|||=|...
T Consensus 1 LfiGDIvG~~Gr~~v~~~Lp~L~~~-~~~DfVIaNgENaa~-G~-G---it~~~~~~L~~---~GvD-viT~GNH~wdkk 70 (253)
T PF13277_consen 1 LFIGDIVGKPGRRAVKEHLPELKEE-YGIDFVIANGENAAG-GF-G---ITPKIAEELFK---AGVD-VITMGNHIWDKK 70 (253)
T ss_dssp EEE-EBBCHHHHHHHHHHHHHHGG---G-SEEEEE-TTTTT-TS-S-----HHHHHHHHH---HT-S-EEE--TTTTSST
T ss_pred CeEEecCCHHHHHHHHHHHHHHHhh-cCCCEEEECCcccCC-CC-C---CCHHHHHHHHh---cCCC-EEecCcccccCc
Confidence 357776432211 2334556666 489999999999853 21 1 11122222222 2333 448999998521
Q ss_pred CCCCCcccccccccccccCCCCCC-CCCCeEEEEecCcEEEEEEecccc--CCCChHHHHHHHHhccccCCCCCCeEEEE
Q 040421 179 PQLGEAIPFKPFANRFHLPYRAPY-STAPFWYSIRRASAHIIVMSCYSA--FGKYTPQYKWLEKEFPKVNRSETPWLIVL 255 (407)
Q Consensus 179 ~~~~~~~~~~~~~~~f~~P~~~~~-~~~~~~ysf~~g~v~fi~Lds~~~--~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~ 255 (407)
+...+-.-..+.--|.|-+. ..+..|..++.++.++-+++-... .....--+..+++.|++. +.+.+.+||=
T Consensus 71 ----ei~~~i~~~~~ilRPaN~p~~~pG~G~~i~~~~g~kv~ViNl~Gr~fm~~~~~PF~~~d~~l~~l-~~~~~~iiVD 145 (253)
T PF13277_consen 71 ----EIFDFIDKEPRILRPANYPPGTPGRGYRIFEKNGKKVAVINLMGRVFMPPIDCPFRAADRLLEEL-KEETDIIIVD 145 (253)
T ss_dssp ----THHHHHHH-SSEE--TTS-TT-SSBSEEEEEETTEEEEEEEEE--TTS---S-HHHHHHHHHHH------SEEEEE
T ss_pred ----HHHHHHhcCCCcEECCCCCCCCCcCcEEEEEECCEEEEEEECcccccCCCCCChHHHHHHHHHhc-cccCCEEEEE
Confidence 11111111122223444332 345668888888888777775321 111222233344444332 2467789999
Q ss_pred eeccccccCCCCCCCChhHHHHHHHHHHhCCCcEEEeccccccccccccccceeeccCCcccccCCCCCceEEE-eCCCC
Q 040421 256 MHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAYERSERMSNIAYNVTNALCSPVSDQSAPVYIT-IGDGG 334 (407)
Q Consensus 256 ~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~g~~~iv-~G~gG 334 (407)
+|.=. .....+ .-.+-.-+|.+|+.=|+|.-..-..+ -++||-||+ .|.-|
T Consensus 146 FHAEa-----------TSEK~A-~g~~lDGrvsaV~GTHTHVqTaDerI----------------Lp~GTaYiTDvGMtG 197 (253)
T PF13277_consen 146 FHAEA-----------TSEKQA-MGWYLDGRVSAVVGTHTHVQTADERI----------------LPGGTAYITDVGMTG 197 (253)
T ss_dssp EE-S------------HHHHHH-HHHHHBTTBSEEEEESSSS-BS--EE-----------------TTS-EEES---EBE
T ss_pred eecCc-----------HHHHHH-HHHHhCCcEEEEEeCCCCccCchhhc----------------cCCCCEEEecCcccc
Confidence 99532 112222 23455678999999999975322222 147788885 44444
Q ss_pred CC
Q 040421 335 NQ 336 (407)
Q Consensus 335 ~~ 336 (407)
..
T Consensus 198 ~~ 199 (253)
T PF13277_consen 198 PY 199 (253)
T ss_dssp ES
T ss_pred Cc
Confidence 43
|
|
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=95.07 E-value=0.096 Score=54.25 Aligned_cols=79 Identities=24% Similarity=0.437 Sum_probs=52.0
Q ss_pred eeccCCCCCcEEEEEEcCCCCCC----CEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 3 ITQGDHEGKGVIVSWVTPDEPGS----NTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
|-+.....+++++.|.-++.+.. ..|+|-++...... .. . ...-...++|+||+|+|.|-+||..
T Consensus 449 ~r~~~~~~~sitlsW~~p~~png~ildYEvky~ek~~~e~~-~~----~------~~t~~~~~ti~gL~p~t~YvfqVRa 517 (996)
T KOG0196|consen 449 LRQVSRTSDSITLSWSEPDQPNGVILDYEVKYYEKDEDERS-YS----T------LKTKTTTATITGLKPGTVYVFQVRA 517 (996)
T ss_pred EEEeeeccCceEEecCCCCCCCCcceeEEEEEeeccccccc-ee----E------EecccceEEeeccCCCcEEEEEEEE
Confidence 44445567899999999875543 35566655421110 00 0 0112446899999999999999964
Q ss_pred ------CCceeeEEEEcCCC
Q 040421 79 ------GNATRQFSFTTPPG 92 (407)
Q Consensus 79 ------~~~s~~~~F~T~p~ 92 (407)
|..|....|.|.+.
T Consensus 518 rT~aG~G~~S~~~~fqT~~~ 537 (996)
T KOG0196|consen 518 RTAAGYGPYSGKHEFQTLPS 537 (996)
T ss_pred ecccCCCCCCCceeeeecCc
Confidence 35688889999875
|
|
| >cd07418 MPP_PP7 PP7, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=95.03 E-value=0.042 Score=52.97 Aligned_cols=71 Identities=15% Similarity=0.039 Sum_probs=38.3
Q ss_pred cEEEEEecCCCCCCchhhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhc--cCCeEEccCCCccc
Q 040421 99 YTFGLIGDLGQTYYSNRTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAA--YQPWIWTVGNHEID 176 (407)
Q Consensus 99 ~~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~--~~P~~~~~GNHD~~ 176 (407)
-++.++||+|........+-.....+..-+.+|++||++..... . -+-...+..+.. ..-++.+.||||..
T Consensus 66 ~~i~VvGDIHG~~~dL~~ll~~~g~~~~~~~ylFLGDyVDRGp~------S-lEvl~lL~~lki~~p~~v~lLRGNHE~~ 138 (377)
T cd07418 66 CEVVVVGDVHGQLHDVLFLLEDAGFPDQNRFYVFNGDYVDRGAW------G-LETFLLLLSWKVLLPDRVYLLRGNHESK 138 (377)
T ss_pred CCEEEEEecCCCHHHHHHHHHHhCCCCCCceEEEeccccCCCCC------h-HHHHHHHHHHhhccCCeEEEEeeecccc
Confidence 36899999997654322221111111112458999999964321 1 111222222222 23478999999985
|
PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, |
| >cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=94.97 E-value=0.042 Score=51.30 Aligned_cols=69 Identities=19% Similarity=0.128 Sum_probs=38.7
Q ss_pred EEEEEecCCCCCCchhhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhh--ccCCeEEccCCCccc
Q 040421 100 TFGLIGDLGQTYYSNRTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNA--AYQPWIWTVGNHEID 176 (407)
Q Consensus 100 ~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~--~~~P~~~~~GNHD~~ 176 (407)
.+.++||.|........+-..... ...+-+|++||++..... --+....+..+. ....++.+.||||..
T Consensus 43 ~i~vvGDIHG~~~dL~~ll~~~~~-~~~~~~lfLGDyVDRG~~-------s~evl~ll~~lk~~~p~~v~llrGNHE~~ 113 (285)
T cd07415 43 PVTVCGDIHGQFYDLLELFRVGGD-PPDTNYLFLGDYVDRGYY-------SVETFLLLLALKVRYPDRITLLRGNHESR 113 (285)
T ss_pred CEEEEEeCCCCHHHHHHHHHHcCC-CCCCeEEEEeEECCCCcC-------HHHHHHHHHHHhhcCCCcEEEEecccchH
Confidence 488899999765433222112222 144678899999964321 111122222222 234589999999974
|
PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2 |
| >cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain | Back alignment and domain information |
|---|
Probab=94.71 E-value=0.056 Score=50.67 Aligned_cols=68 Identities=19% Similarity=0.217 Sum_probs=38.1
Q ss_pred EEEEEecCCCCCCchh-hHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhc--cCCeEEccCCCccc
Q 040421 100 TFGLIGDLGQTYYSNR-TLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAA--YQPWIWTVGNHEID 176 (407)
Q Consensus 100 ~f~~~gD~~~~~~~~~-~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~--~~P~~~~~GNHD~~ 176 (407)
.++++||+|....... .+.. ... ...+-+|++||++..... . .+. ...+..+.. ..-++.+.||||..
T Consensus 51 ~i~viGDIHG~~~~L~~l~~~-~~~-~~~~~~lfLGDyVDRG~~----s--~e~-i~ll~~lk~~~p~~i~llrGNHE~~ 121 (293)
T cd07414 51 PLKICGDIHGQYYDLLRLFEY-GGF-PPESNYLFLGDYVDRGKQ----S--LET-ICLLLAYKIKYPENFFLLRGNHECA 121 (293)
T ss_pred ceEEEEecCCCHHHHHHHHHh-cCC-CCcceEEEEeeEecCCCC----c--HHH-HHHHHHhhhhCCCcEEEEecccchh
Confidence 5889999997643332 2222 222 144678899999965321 1 111 122222221 22478899999984
|
PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg |
| >COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=94.67 E-value=0.093 Score=51.41 Aligned_cols=81 Identities=14% Similarity=0.192 Sum_probs=52.9
Q ss_pred CCCcEEEEEecCCCCCCch-----hhHHHhhhCC----CCCceEEEcCCccccCCCCC-CC--------chhhhHHHHHH
Q 040421 96 DVPYTFGLIGDLGQTYYSN-----RTLTHYELNP----IKGQTVLFVGDLSYADDYPF-HD--------NNRWDTWGRFI 157 (407)
Q Consensus 96 ~~~~~f~~~gD~~~~~~~~-----~~l~~~~~~~----~~~d~vl~~GD~~y~~~~~~-~~--------~~~~~~~~~~~ 157 (407)
...+++++++|.|.+.... ..+-.+..-+ .+...++.+||.+..-|... .. ..+++.+.+++
T Consensus 223 ~e~v~v~~isDih~GSk~F~~~~f~~fi~wl~g~~~~a~~vkyliiagd~VDGigiYpgq~~eL~i~di~~qy~~~A~~L 302 (481)
T COG1311 223 DERVYVALISDIHRGSKEFLEDEFEKFIDWLNGPGDLASRVKYLIIAGDVVDGIGIYPGQEEELVIADIYEQYEELAEFL 302 (481)
T ss_pred CcceEEEEEeeeecccHHHHHHHHHHHHHHhcCCcccccceEEEEEecccccccccccCcccccccccchHHHHHHHHHH
Confidence 4678899999999875321 1111222211 24478999999997544321 11 23566667777
Q ss_pred hhhhccCCeEEccCCCccc
Q 040421 158 ERNAAYQPWIWTVGNHEID 176 (407)
Q Consensus 158 ~~~~~~~P~~~~~GNHD~~ 176 (407)
..+...+-++..|||||..
T Consensus 303 ~~vp~~I~v~i~PGnhDa~ 321 (481)
T COG1311 303 DQVPEHIKVFIMPGNHDAV 321 (481)
T ss_pred hhCCCCceEEEecCCCCcc
Confidence 7777778899999999983
|
|
| >PTZ00239 serine/threonine protein phosphatase 2A; Provisional | Back alignment and domain information |
|---|
Probab=94.31 E-value=0.081 Score=49.77 Aligned_cols=23 Identities=9% Similarity=0.086 Sum_probs=19.9
Q ss_pred HHHHHHHHHhCCCcEEEeccccc
Q 040421 275 RVLYEPWFVEYKVDVVFAAHVHA 297 (407)
Q Consensus 275 ~~~l~~l~~~~~vdlvl~GH~H~ 297 (407)
.+.+...+++.+.++++=||.-.
T Consensus 215 ~~~~~~Fl~~n~l~~iiR~He~~ 237 (303)
T PTZ00239 215 AKVTKEFCRLNDLTLICRAHQLV 237 (303)
T ss_pred HHHHHHHHHHCCCcEEEEcChhh
Confidence 46788899999999999999854
|
|
| >COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.27 E-value=0.14 Score=42.28 Aligned_cols=67 Identities=21% Similarity=0.198 Sum_probs=40.3
Q ss_pred EEEEEecCCCCCCc--------------hhhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccCC
Q 040421 100 TFGLIGDLGQTYYS--------------NRTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQP 165 (407)
Q Consensus 100 ~f~~~gD~~~~~~~--------------~~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P 165 (407)
.+.++||+|.+... ...+..+.+-...-|.+.++||++.... .-......++.|.. -
T Consensus 5 mmyfisDtHfgh~nvi~~~pfsn~~ehd~vil~N~nntv~p~D~lwhLGDl~~~~n-------~~~~a~~IlerLnG--r 75 (186)
T COG4186 5 MMYFISDTHFGHKNVISMRPFSNPDEHDEVILSNWNNTVGPDDVLWHLGDLSSGAN-------RERAAGLILERLNG--R 75 (186)
T ss_pred EEEEecccccCCcceeecCCCCCHHHHhHHHHHhHHhcCCccceEEEecccccccc-------hhhHHHHHHHHcCC--c
Confidence 46778999876421 1123334433323488999999985421 12334555565544 3
Q ss_pred eEEccCCCcc
Q 040421 166 WIWTVGNHEI 175 (407)
Q Consensus 166 ~~~~~GNHD~ 175 (407)
...++||||-
T Consensus 76 khlv~GNhDk 85 (186)
T COG4186 76 KHLVPGNHDK 85 (186)
T ss_pred EEEeeCCCCC
Confidence 4889999997
|
|
| >PTZ00480 serine/threonine-protein phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.27 E-value=0.072 Score=50.36 Aligned_cols=69 Identities=22% Similarity=0.303 Sum_probs=38.1
Q ss_pred EEEEEecCCCCCCchhhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhc--cCCeEEccCCCccc
Q 040421 100 TFGLIGDLGQTYYSNRTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAA--YQPWIWTVGNHEID 176 (407)
Q Consensus 100 ~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~--~~P~~~~~GNHD~~ 176 (407)
+++++||+|........+-.....+ ..+-.|++||++..... ..+. ...+..+.. ...++.+.||||..
T Consensus 60 ~i~vvGDIHG~~~dL~~l~~~~g~~-~~~~ylfLGDyVDRG~~------s~ev-l~ll~~lki~~p~~v~llRGNHE~~ 130 (320)
T PTZ00480 60 PLKICGDVHGQYFDLLRLFEYGGYP-PESNYLFLGDYVDRGKQ------SLET-ICLLLAYKIKYPENFFLLRGNHECA 130 (320)
T ss_pred CeEEEeecccCHHHHHHHHHhcCCC-CcceEEEeceecCCCCC------cHHH-HHHHHHhcccCCCceEEEecccchh
Confidence 5888999997643322221122221 34678899999965321 1111 222222221 23578999999984
|
|
| >cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=93.85 E-value=0.11 Score=49.28 Aligned_cols=71 Identities=18% Similarity=0.192 Sum_probs=38.0
Q ss_pred cEEEEEecCCCCCCchhhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhh--hccCCeEEccCCCccc
Q 040421 99 YTFGLIGDLGQTYYSNRTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERN--AAYQPWIWTVGNHEID 176 (407)
Q Consensus 99 ~~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~--~~~~P~~~~~GNHD~~ 176 (407)
-++.++||+|........+-.....+..-|-+|++||++..... .-+. ...+-.+ ....-++.+.||||..
T Consensus 60 ~~~~VvGDIHG~~~dL~~ll~~~g~~~~~~~ylFLGDyVDRG~~------S~Ev-l~ll~~lki~~p~~v~lLRGNHE~~ 132 (316)
T cd07417 60 EKITVCGDTHGQFYDLLNIFELNGLPSETNPYLFNGDFVDRGSF------SVEV-ILTLFAFKLLYPNHFHLNRGNHETD 132 (316)
T ss_pred ceeEEeecccCCHHHHHHHHHhcCCCCccCeEEEEeeEecCCCC------hHHH-HHHHHHhhhccCCceEEEeeccchH
Confidence 47899999997643322111111111123579999999965321 1111 1222122 1223468899999974
|
Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel |
| >KOG3947 consensus Phosphoesterases [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.51 E-value=2.1 Score=39.05 Aligned_cols=67 Identities=19% Similarity=0.270 Sum_probs=41.2
Q ss_pred CCCcEEEEEecCCCCCCchhhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccCCe---EEccCC
Q 040421 96 DVPYTFGLIGDLGQTYYSNRTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPW---IWTVGN 172 (407)
Q Consensus 96 ~~~~~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P~---~~~~GN 172 (407)
....||+.++|+|..... +... ..-|+++++||...- + ..+....|.+.+ .+.|. +++.||
T Consensus 59 ~~~~r~VcisdtH~~~~~------i~~~-p~gDvlihagdfT~~-g----~~~ev~~fn~~~----gslph~yKIVIaGN 122 (305)
T KOG3947|consen 59 PGYARFVCISDTHELTFD------INDI-PDGDVLIHAGDFTNL-G----LPEEVIKFNEWL----GSLPHEYKIVIAGN 122 (305)
T ss_pred CCceEEEEecCcccccCc------cccC-CCCceEEeccCCccc-c----CHHHHHhhhHHh----ccCcceeeEEEeec
Confidence 367899999999965432 1222 367999999999842 1 112222233322 23343 678999
Q ss_pred CccccC
Q 040421 173 HEIDFA 178 (407)
Q Consensus 173 HD~~~~ 178 (407)
||...+
T Consensus 123 HELtFd 128 (305)
T KOG3947|consen 123 HELTFD 128 (305)
T ss_pred cceeec
Confidence 999654
|
|
| >PF09587 PGA_cap: Bacterial capsule synthesis protein PGA_cap; InterPro: IPR019079 CapA is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria | Back alignment and domain information |
|---|
Probab=93.25 E-value=0.21 Score=45.78 Aligned_cols=64 Identities=13% Similarity=0.205 Sum_probs=43.8
Q ss_pred HHHHHHHhccccCCCCCCeEEEEeeccccccCCCCCCCChhHHHHHHHHHHhCCCcEEEecccccccccc
Q 040421 233 QYKWLEKEFPKVNRSETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAYERSE 302 (407)
Q Consensus 233 Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~ 302 (407)
+.+.+.++++++. .+..++||++|.-.-. . ......+..+...+-+.++|+|+.+|.|..|-..
T Consensus 169 ~~~~i~~~i~~~r-~~~D~vIv~~HwG~e~----~-~~p~~~q~~~a~~lidaGaDiIiG~HpHv~q~~E 232 (250)
T PF09587_consen 169 GIERIKEDIREAR-KKADVVIVSLHWGIEY----E-NYPTPEQRELARALIDAGADIIIGHHPHVIQPVE 232 (250)
T ss_pred hHHHHHHHHHHHh-cCCCEEEEEeccCCCC----C-CCCCHHHHHHHHHHHHcCCCEEEeCCCCcccceE
Confidence 3477888887765 5678999999974211 1 1112233455555556899999999999988665
|
Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein []. |
| >PTZ00244 serine/threonine-protein phosphatase PP1; Provisional | Back alignment and domain information |
|---|
Probab=93.02 E-value=0.094 Score=49.13 Aligned_cols=23 Identities=13% Similarity=0.211 Sum_probs=19.7
Q ss_pred HHHHHHHHHhCCCcEEEeccccc
Q 040421 275 RVLYEPWFVEYKVDVVFAAHVHA 297 (407)
Q Consensus 275 ~~~l~~l~~~~~vdlvl~GH~H~ 297 (407)
.+.....+++++.++++=||.-.
T Consensus 224 ~~~~~~Fl~~n~l~~iiR~Hq~~ 246 (294)
T PTZ00244 224 EDIVNDFLDMVDMDLIVRAHQVM 246 (294)
T ss_pred HHHHHHHHHHcCCcEEEEcCccc
Confidence 45778899999999999999854
|
|
| >cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain | Back alignment and domain information |
|---|
Probab=92.54 E-value=0.25 Score=46.80 Aligned_cols=22 Identities=14% Similarity=0.181 Sum_probs=18.9
Q ss_pred HHHHHHHHHhCCCcEEEecccc
Q 040421 275 RVLYEPWFVEYKVDVVFAAHVH 296 (407)
Q Consensus 275 ~~~l~~l~~~~~vdlvl~GH~H 296 (407)
.+++...++++++++++=||.=
T Consensus 242 ~~~~~~Fl~~n~l~~iiRgHe~ 263 (311)
T cd07419 242 PDRVHRFLEENDLQMIIRAHEC 263 (311)
T ss_pred HHHHHHHHHHCCCeEEEEechh
Confidence 4677889999999999999973
|
Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most |
| >cd00063 FN3 Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin | Back alignment and domain information |
|---|
Probab=91.95 E-value=0.76 Score=33.38 Aligned_cols=62 Identities=23% Similarity=0.327 Sum_probs=36.1
Q ss_pred CCCCCcEEEEEEcCCCC----CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 7 DHEGKGVIVSWVTPDEP----GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 7 ~~~~~~~~v~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
.....++.|.|...... ....|.|............. ...-...+.|.+|.|++.|.++|..
T Consensus 11 ~~~~~~~~v~W~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~----------~~~~~~~~~i~~l~p~~~Y~~~v~a 76 (93)
T cd00063 11 DVTSTSVTLSWTPPEDDGGPITGYVVEYREKGSGDWKEVEV----------TPGSETSYTLTGLKPGTEYEFRVRA 76 (93)
T ss_pred EecCCEEEEEECCCCCCCCcceeEEEEEeeCCCCCCEEeec----------cCCcccEEEEccccCCCEEEEEEEE
Confidence 33458999999987432 12344444433111111110 0023456788999999999999954
|
Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. |
| >smart00060 FN3 Fibronectin type 3 domain | Back alignment and domain information |
|---|
Probab=88.73 E-value=1.9 Score=30.09 Aligned_cols=61 Identities=21% Similarity=0.297 Sum_probs=34.4
Q ss_pred CCcEEEEEEcCCCCC--CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 10 GKGVIVSWVTPDEPG--SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 10 ~~~~~v~W~t~~~~~--~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
++++.|+|..+.... ...+.|........ ....... .....+...|.+|+|++.|.++|..
T Consensus 14 ~~~~~v~W~~~~~~~~~~y~~~~~~~~~~~~--~~~~~~~------~~~~~~~~~i~~L~~~~~Y~v~v~a 76 (83)
T smart00060 14 STSVTLSWEPPPDDGITGYIVGYRVEYREEG--SSWKEVN------VTPSSTSYTLTGLKPGTEYEFRVRA 76 (83)
T ss_pred CCEEEEEECCCCCCCCCccEEEEEEEEecCC--CccEEEE------ecCCccEEEEeCcCCCCEEEEEEEE
Confidence 348999998653221 24555655432111 0000000 0011467889999999999999864
|
One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. |
| >PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast | Back alignment and domain information |
|---|
Probab=84.22 E-value=0.6 Score=41.36 Aligned_cols=76 Identities=8% Similarity=0.057 Sum_probs=39.7
Q ss_pred EEEEecCCCCCCc--hhhHHHhhhC---CCCCceEEEcCCccccCCCCC--CC---chhh-hHH----HHHHhhhhccCC
Q 040421 101 FGLIGDLGQTYYS--NRTLTHYELN---PIKGQTVLFVGDLSYADDYPF--HD---NNRW-DTW----GRFIERNAAYQP 165 (407)
Q Consensus 101 f~~~gD~~~~~~~--~~~l~~~~~~---~~~~d~vl~~GD~~y~~~~~~--~~---~~~~-~~~----~~~~~~~~~~~P 165 (407)
|++++|.+.+... .+.+.++.+. ..+|+.+|++|+.+....... .. .... ..+ .+.++.+...++
T Consensus 1 Iv~~Sg~~~~~~~~~~~~L~~~l~~~~~~~~p~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 80 (209)
T PF04042_consen 1 IVFASGPFLDSDNLSLEPLRDLLSGVEDASKPDVLILMGPFIDSPHPYISSGSVPDSYSFEEDFLKELDSFLESILPSTQ 80 (209)
T ss_dssp EEEEES--CTTT-HHHHHHHHHHHCCCHCTTECEEEEES-SCBTTSHHHHHT---HHCCHHHHHHHHCHHHHCCCHCCSE
T ss_pred CEEEecCccCCCHhHHHHHHHHHHhccccCCCcEEEEeCCCcCccccccccccccccccccHHHHHHHHHHHhhcccccE
Confidence 5788998887432 3444444321 137999999999996533110 00 0011 111 222334456789
Q ss_pred eEEccCCCccc
Q 040421 166 WIWTVGNHEID 176 (407)
Q Consensus 166 ~~~~~GNHD~~ 176 (407)
++.+||+||..
T Consensus 81 vvlvPg~~D~~ 91 (209)
T PF04042_consen 81 VVLVPGPNDPT 91 (209)
T ss_dssp EEEE--TTCTT
T ss_pred EEEeCCCcccc
Confidence 99999999985
|
In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G. |
| >KOG4221 consensus Receptor mediating netrin-dependent axon guidance [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=82.19 E-value=2.3 Score=46.49 Aligned_cols=76 Identities=21% Similarity=0.298 Sum_probs=42.9
Q ss_pred eeccCCCCCcEEEEEEcCCCCCC------CEEEEeecCCCCc---eEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEE
Q 040421 3 ITQGDHEGKGVIVSWVTPDEPGS------NTVLYWAENSTLK---QQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYY 73 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~~~------~~v~y~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~ 73 (407)
|.+-.+.+++++|.|..+..... -.++|+..+.... ..+.+ ..+. -.+.+|+|+|.|.
T Consensus 622 l~lev~sStsVrVsW~pP~~~t~ng~itgYkIRy~~~~~~~~~~~t~v~~-----------n~~~--~l~~~Lep~T~Y~ 688 (1381)
T KOG4221|consen 622 LSLEVVSSTSVRVSWLPPPSETQNGQITGYKIRYRKLSREDEVNETVVKG-----------NTTQ--YLFNGLEPNTQYR 688 (1381)
T ss_pred eEEEecCCCeEEEEccCCCcccccceEEEEEEEecccCcccccceeeccc-----------chhh--hHhhcCCCCceEE
Confidence 44445567889999988753322 1344444332211 11111 1122 2457899999999
Q ss_pred EEeCc------CCceeeEEEEcCC
Q 040421 74 YEVGV------GNATRQFSFTTPP 91 (407)
Q Consensus 74 Y~v~~------~~~s~~~~F~T~p 91 (407)
+||.. +..|....+.|+-
T Consensus 689 vrIsa~t~nGtGpaS~w~~aeT~~ 712 (1381)
T KOG4221|consen 689 VRISAMTVNGTGPASEWVSAETPE 712 (1381)
T ss_pred EEEEEeccCCCCCcccceeccCcc
Confidence 99954 3456666777753
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 407 | ||||
| 1xzw_A | 426 | Sweet Potato Purple Acid PhosphatasePHOSPHATE COMPL | 1e-173 | ||
| 4dsy_A | 426 | Crystal Structure Of Red Kidney Bean Purple Acid Ph | 1e-172 | ||
| 2qfp_A | 424 | Crystal Structure Of Red Kidney Bean Purple Acid Ph | 1e-171 | ||
| 1kbp_A | 432 | Kidney Bean Purple Acid Phosphatase Length = 432 | 1e-171 |
| >pdb|1XZW|A Chain A, Sweet Potato Purple Acid PhosphatasePHOSPHATE COMPLEX Length = 426 | Back alignment and structure |
|
| >pdb|4DSY|A Chain A, Crystal Structure Of Red Kidney Bean Purple Acid Phosphatase In Complex With Maybridge Fragment Cc24201 Length = 426 | Back alignment and structure |
|
| >pdb|2QFP|A Chain A, Crystal Structure Of Red Kidney Bean Purple Acid Phosphatase In Complex With Fluoride Length = 424 | Back alignment and structure |
|
| >pdb|1KBP|A Chain A, Kidney Bean Purple Acid Phosphatase Length = 432 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 407 | |||
| 2qfp_A | 424 | Purple acid phosphatase; binuclear, Fe-Zn, hydrola | 1e-153 | |
| 1xzw_A | 426 | Purple acid phosphatase; hydrolase; HET: NAG FUC M | 1e-149 | |
| 1ute_A | 313 | Protein (II purple acid phosphatase); tartrate res | 2e-31 | |
| 3tgh_A | 342 | Glideosome-associated protein 50; phosphatase fold | 2e-23 | |
| 2nxf_A | 322 | Putative dimetal phosphatase; dinuclear metal cent | 2e-05 | |
| 1uen_A | 125 | KIAA0343 protein; immunoglobulin-like beta-sandwic | 2e-05 | |
| 2dm4_A | 108 | Sortilin-related receptor; beta-sandwich, sorting | 4e-05 | |
| 2ede_A | 114 | Netrin receptor DCC; tumor suppressor protein DCC, | 4e-05 | |
| 2xmo_A | 443 | LMO2642 protein; phosphodiesterase, hydrolase; 1.7 | 5e-05 | |
| 2dlh_A | 121 | Receptor-type tyrosine-protein phosphatase delta; | 1e-04 | |
| 1x4x_A | 106 | Fibronectin type-III domain containing protein 3A; | 1e-04 | |
| 3ib7_A | 330 | ICC protein; metallophosphoesterase, alpha-beta fo | 2e-04 | |
| 1wfo_A | 130 | Sidekick 2; FN3, cell adhesion, structural genomic | 2e-04 | |
| 3d03_A | 274 | Phosphohydrolase; glycerophosphodiesterase, metall | 4e-04 | |
| 3p4l_A | 211 | Neogenin; iron homeostasis, hemojuvelin receptor, | 5e-04 | |
| 1va9_A | 122 | DOWN syndrome cell adhesion molecule like- protein | 6e-04 |
| >2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A* Length = 424 | Back alignment and structure |
|---|
Score = 437 bits (1125), Expect = e-153
Identities = 279/401 (69%), Positives = 326/401 (81%)
Query: 1 VHITQGDHEGKGVIVSWVTPDEPGSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHH 60
VHITQGD G+ +I+SWVT DEPGS+ V YW+E + K+ A G + TY +FNY+S IHH
Sbjct: 22 VHITQGDLVGRAMIISWVTMDEPGSSAVRYWSEKNGRKRIAKGKMSTYRFFNYSSGFIHH 81
Query: 61 CTIEDLEFDTKYYYEVGVGNATRQFSFTTPPGVGPDVPYTFGLIGDLGQTYYSNRTLTHY 120
TI L+++TKYYYEVG+ N TR+FSF TPP G DVPYTFGLIGDLGQ++ SN TL+HY
Sbjct: 82 TTIRKLKYNTKYYYEVGLRNTTRRFSFITPPQTGLDVPYTFGLIGDLGQSFDSNTTLSHY 141
Query: 121 ELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHEIDFAPQ 180
EL+P KGQTVLFVGDLSYAD YP HDN RWDTWGRF ER+ AYQPWIWT GNHEI+FAP+
Sbjct: 142 ELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTERSVAYQPWIWTAGNHEIEFAPE 201
Query: 181 LGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRRASAHIIVMSCYSAFGKYTPQYKWLEKE 240
+ E PFKPF+ R+H+PY A ST+PFWYSI+RASAHIIV+S YSA+G+ TPQY WL+KE
Sbjct: 202 INETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHIIVLSSYSAYGRGTPQYTWLKKE 261
Query: 241 FPKVNRSETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAYER 300
KV RSETPWLIVLMH PLYNSY HH+MEGE MR +E WFV+YKVDVVFA HVHAYER
Sbjct: 262 LRKVKRSETPWLIVLMHSPLYNSYNHHFMEGEAMRTKFEAWFVKYKVDVVFAGHVHAYER 321
Query: 301 SERMSNIAYNVTNALCSPVSDQSAPVYITIGDGGNQEGLAKEMTEPQPRYSAYREASFGH 360
SER+SNIAY +TN LC+PV DQSAPVYITIGD GN + M +PQP YSA+REASFGH
Sbjct: 322 SERVSNIAYKITNGLCTPVKDQSAPVYITIGDAGNYGVIDSNMIQPQPEYSAFREASFGH 381
Query: 361 GILDVKNRTHAYFGWHRNQDDYAVEADSVWLHNRYWKPSGE 401
G+ D+KNRTHA+F W+RNQD AVEADSVW NR+W P +
Sbjct: 382 GMFDIKNRTHAHFSWNRNQDGVAVEADSVWFFNRHWYPVDD 422
|
| >1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1 Length = 426 | Back alignment and structure |
|---|
Score = 428 bits (1101), Expect = e-149
Identities = 280/397 (70%), Positives = 328/397 (82%), Gaps = 1/397 (0%)
Query: 1 VHITQGDHEGKGVIVSWVTP-DEPGSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIH 59
VHITQGD+EG+GVI+SW TP D+ G+N V YW+ENS +++A G V+TY Y+NYTS IH
Sbjct: 28 VHITQGDYEGRGVIISWTTPYDKAGANKVFYWSENSKSQKRAMGTVVTYKYYNYTSAFIH 87
Query: 60 HCTIEDLEFDTKYYYEVGVGNATRQFSFTTPPGVGPDVPYTFGLIGDLGQTYYSNRTLTH 119
HCTI+DLE+DTKYYY +G G+A RQF F TPP GPDVPY FGLIGD+GQT+ SN TLTH
Sbjct: 88 HCTIKDLEYDTKYYYRLGFGDAKRQFWFVTPPKPGPDVPYVFGLIGDIGQTHDSNTTLTH 147
Query: 120 YELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHEIDFAP 179
YE N KGQ VLF+GDLSY++ +P HDNNRWDTWGRF ER+ AYQPWIWT GNHEID+AP
Sbjct: 148 YEQNSAKGQAVLFMGDLSYSNRWPNHDNNRWDTWGRFSERSVAYQPWIWTAGNHEIDYAP 207
Query: 180 QLGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRRASAHIIVMSCYSAFGKYTPQYKWLEK 239
+GE PF PF NR+ P+ A S P WY+I+RASAHIIV+S YS F KY+PQYKW
Sbjct: 208 DIGEYQPFVPFTNRYPTPHEASGSGDPLWYAIKRASAHIIVLSSYSGFVKYSPQYKWFTS 267
Query: 240 EFPKVNRSETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAYE 299
E KVNRSETPWLIVL+H PLYNSY HYMEGE MR ++EP+FV YKVD+VF+ HVH+YE
Sbjct: 268 ELEKVNRSETPWLIVLVHAPLYNSYEAHYMEGEAMRAIFEPYFVYYKVDIVFSGHVHSYE 327
Query: 300 RSERMSNIAYNVTNALCSPVSDQSAPVYITIGDGGNQEGLAKEMTEPQPRYSAYREASFG 359
RSER+SN+AYN+ NA C+PVSD+SAPVYITIGDGGN EGLA EMT+PQP YSA+REASFG
Sbjct: 328 RSERVSNVAYNIVNAKCTPVSDESAPVYITIGDGGNSEGLASEMTQPQPSYSAFREASFG 387
Query: 360 HGILDVKNRTHAYFGWHRNQDDYAVEADSVWLHNRYW 396
HGI D+KNRTHA+F WHRNQD +VEADS+WL NRYW
Sbjct: 388 HGIFDIKNRTHAHFSWHRNQDGASVEADSLWLLNRYW 424
|
| >1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A* Length = 313 | Back alignment and structure |
|---|
Score = 120 bits (302), Expect = 2e-31
Identities = 42/287 (14%), Positives = 83/287 (28%), Gaps = 55/287 (19%)
Query: 95 PDVPYTFGLIGDLGQTYYSNRTLTHYELN---------PIKGQTVLFVGDLSYADDYPFH 145
P F +GD G + N + +L +GD Y
Sbjct: 3 PTPILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDA 62
Query: 146 DNNRWDTW--GRFIERNAAYQPWIWTVGNHEIDFAPQLGEAIPFKPFANRFHLPYRAPYS 203
+ R+ F + + PW GNH+ I + + R++ P +PY
Sbjct: 63 KDKRFQETFEDVFSDPSLRNVPWHVLAGNHDHLGNVS--AQIAYSKISKRWNFP--SPYY 118
Query: 204 TAPFWYSIRRASAHIIVM-----------------SCYSAFGKYTPQYKWLEKEFPKVNR 246
F S I ++ Q W++K+ +
Sbjct: 119 RLRFKIPRSNVSVAIFMLDTVTLCGNSDDFVSQQPERPRNLALARTQLAWIKKQ---LAA 175
Query: 247 SETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAYERSERMSN 306
++ +++V H P+++ H + P +KV H H + +
Sbjct: 176 AKEDYVLVAGHYPVWSIAEHGPTHC--LVKQLLPLLTTHKVTAYLCGHDHNLQYLQ---- 229
Query: 307 IAYNVTNALCSPVSDQSAPVYITIGDGGNQEGLAKEMTEPQPRYSAY 353
D++ ++ G G + K + + Y +
Sbjct: 230 --------------DENGLGFVLSGAGNFMDPSKKHLRKVPNGYLRF 262
|
| >3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7} Length = 342 | Back alignment and structure |
|---|
Score = 98.8 bits (245), Expect = 2e-23
Identities = 40/322 (12%), Positives = 90/322 (27%), Gaps = 66/322 (20%)
Query: 98 PYTFGLIGDLGQTYYSNRTLTHYELNPIKGQTVLFV---GDLSYADDYPFHDNNRWDTWG 154
F +GD G+ Y IK + V F+ G D ++ W
Sbjct: 3 QLRFASLGDWGKDTKGQILNAKYFKQFIKNERVTFIVSPGSNFI-DGVKGLNDPAWKNLY 61
Query: 155 RFI---ERNAAYQPWIWTVGNHEIDFAPQ-----------------LGEAIPFKPFANRF 194
+ E+ Y P+ +G + E ++
Sbjct: 62 EDVYSEEKGDMYMPFFTVLGTRDWTGNYNAQLLKGQGIYIEKNGETSIEKDADATNYPKW 121
Query: 195 HLP---------YRAPYSTAPFWYSIRRASAHIIVMSCYSAFGKYTP------QYKWLEK 239
+P + + + +A I + + + + L+
Sbjct: 122 IMPNYWYHYFTHFTVSSGPSIVKTGHKDLAAAFIFIDTWVLSSNFPYKKIHEKAWNDLKS 181
Query: 240 EFPKVNRSETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAYE 299
+ V + ++IV+ P+Y+S + P + +VD+ + H + E
Sbjct: 182 QL-SVAKKIADFIIVVGDQPIYSSGYSRGSSY--LAYYLLPLLKDAEVDLYISGHDNNME 238
Query: 300 RSERMSNIAYNVTNALCSPVSDQSAPVYITIGDGGNQEGLAKEMTEPQPRYSAYREASFG 359
E + +IT G G +G + + S + + G
Sbjct: 239 VIE-------------------DNDMAHITCGSGSMSQGKSG----MKNSKSLFFSSDIG 275
Query: 360 HGILDVKNRTHAYFGWHRNQDD 381
+ ++ + + ++
Sbjct: 276 FCVHEL-SNNGIVTKFVSSKKG 296
|
| >2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12 Length = 322 | Back alignment and structure |
|---|
Score = 45.3 bits (106), Expect = 2e-05
Identities = 34/300 (11%), Positives = 63/300 (21%), Gaps = 70/300 (23%)
Query: 100 TFGLIGDL--------------GQTYYSNRTLTHY----ELNPIKGQTVLFVGDLSYADD 141
TFGLI D+ + YY + + Q V+ +GD+ +
Sbjct: 7 TFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRERVQCVVQLGDIIDGHN 66
Query: 142 YPFHDNNRWDTWGRFIERNAAYQ-PWIWTVGNHEIDFAPQLGEAIPFKPFANRFHLPYRA 200
+ + A GNHE + A R +
Sbjct: 67 RR--RDASDRALDTVMAELDACSVDVHHVWGNHEFYNFSRPSLLSSRLNSAQRTGTDTGS 124
Query: 201 PYSTAP-FWYSIRRASA-HIIVMSCYSAFGKYTP-------------------------- 232
+ Y A +++ Y
Sbjct: 125 DLIGDDIYAYEFSPAPNFRFVLLDAYDLSVIGREEESEKHTHSWRILTQHNHNLQDLNLP 184
Query: 233 --------------------QYKWLEKEFPKVNRSETPWLIVLMHCPLYNSYVHHYMEGE 272
Q +WL+ + + ++ H P++
Sbjct: 185 PVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDHKQERV-LIFSHLPVHPCAADPICLAW 243
Query: 273 PMRVLYEPWFVEYKVDVVFAAHVHAYERSERMSNIAYNVTNALCSPVSDQSAPVYITIGD 332
+ V A H H R S + + A + +
Sbjct: 244 NHEAVLSVLRSHQSVLCFIAGHDHDGGRCTDSSGAQHITLEGVIETPPHSHAFATAYLYE 303
|
| >1uen_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, NG-CAM related cell adhesion molecule, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 125 | Back alignment and structure |
|---|
Score = 42.8 bits (101), Expect = 2e-05
Identities = 22/95 (23%), Positives = 29/95 (30%), Gaps = 15/95 (15%)
Query: 13 VIVSWVTPDEPGSN------TVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDL 66
V W + YW S+ K+ I F + H + L
Sbjct: 31 AEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQGSK---THGMLPGL 87
Query: 67 EFDTKYYYEV------GVGNATRQFSFTTPPGVGP 95
E + Y V G G A+ F TP G GP
Sbjct: 88 EPFSHYTLNVRVVNGKGEGPASPDRVFNTPEGSGP 122
|
| >2dm4_A Sortilin-related receptor; beta-sandwich, sorting protein-related receptor containing LDLR class A repeats, sorla; NMR {Homo sapiens} Length = 108 | Back alignment and structure |
|---|
Score = 41.7 bits (98), Expect = 4e-05
Identities = 21/93 (22%), Positives = 29/93 (31%), Gaps = 23/93 (24%)
Query: 13 VIVSWVTPDEPGSN----TVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEF 68
++ W P V Y S + SN I++L
Sbjct: 26 IVGHWAPPIHTHGLIREYIVEYSRSGSK----------MWASQRAASN---FTEIKNLLV 72
Query: 69 DTKYYYEV------GVGNATRQFSFTTPPGVGP 95
+T Y V G+GN + S TT G GP
Sbjct: 73 NTLYTVRVAAVTSRGIGNWSDSKSITTIKGSGP 105
|
| >2ede_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 114 | Back alignment and structure |
|---|
Score = 41.6 bits (98), Expect = 4e-05
Identities = 22/93 (23%), Positives = 32/93 (34%), Gaps = 18/93 (19%)
Query: 13 VIVSWVTPDEPGSN----TVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEF 68
VIVSW P E + Y + + ++ + + I DL
Sbjct: 27 VIVSWQPPLEANGKITAYILFYTLDKNIPIDDWIMETISGDRLTHQ--------IMDLNL 78
Query: 69 DTKYYYEV------GVGNATRQFSFTTPPGVGP 95
DT YY+ + GVG + F T GP
Sbjct: 79 DTMYYFRIQARNSKGVGPLSDPILFRTLKVSGP 111
|
| >2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes} Length = 443 | Back alignment and structure |
|---|
Score = 44.4 bits (104), Expect = 5e-05
Identities = 32/224 (14%), Positives = 62/224 (27%), Gaps = 45/224 (20%)
Query: 130 VLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQ----PWIWTVGNHEI------DFAP 179
++ GDL+ +N + ++ + GNH+I F
Sbjct: 96 LIISGDLT--------NNGEKTSHEELAKKLTQVEKNGTQVFVVPGNHDINNPWARKFEK 147
Query: 180 QLGEAIPFKPFANRFHLPYRAPYSTA------PFWYSIRRASAHIIVM---SCYSAFGKY 230
+ + Y A Y +S ++M + Y +
Sbjct: 148 DKQLPTDTISPTDFSKIYSDFGYEDAISSDEFSLSYLAAPSSKVWLLMLDTAIYKTNMQQ 207
Query: 231 TP----------QYKWLEKEFPKVNRSETPWLIVLMHCPLYNSYVHHYMEGEPMRV--LY 278
W+++ ++ LI ++H L + +G +
Sbjct: 208 GNPTTEGGLTAGTLDWIKESSALAKKNGAK-LIPVLHHNLT-DHNDVIQKGYTINYNQQV 265
Query: 279 EPWFVEYKVDVVFAAHVH----AYERSERMSNIAYNVTNALCSP 318
E +D + H+H +S I VTNAL
Sbjct: 266 IDALTEGAMDFSLSGHIHTQNIRSAKSTDGKEITDIVTNALSVF 309
|
| >2dlh_A Receptor-type tyrosine-protein phosphatase delta; protein-tyrosine phosphatase delta, R-PTP-delta, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 121 | Back alignment and structure |
|---|
Score = 40.5 bits (95), Expect = 1e-04
Identities = 19/93 (20%), Positives = 29/93 (31%), Gaps = 19/93 (20%)
Query: 13 VIVSWVTPDEPGSN----TVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEF 68
++V W P+EP V Y + + N+ + TI +L
Sbjct: 35 ILVQWKEPEEPNGQIQGYRVYYTMDPTQHV---------NNWMKHNVADSQITTIGNLVP 85
Query: 69 DTKYYYEV------GVGNATRQFSFTTPPGVGP 95
Y +V G G + T G GP
Sbjct: 86 QKTYSVKVLAFTSIGDGPLSSDIQVITQTGSGP 118
|
| >1x4x_A Fibronectin type-III domain containing protein 3A; FN3, immunoglobulin-like beta- sandwich fold, KIAA0970, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 106 | Back alignment and structure |
|---|
Score = 40.0 bits (94), Expect = 1e-04
Identities = 20/92 (21%), Positives = 27/92 (29%), Gaps = 21/92 (22%)
Query: 13 VIVSWVTPDEPGSNT---VLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFD 69
V+W P G++ L W Q + I+ L
Sbjct: 24 AQVNWEVPLSNGTDVTEYRLEWGGVEGSMQICYCGPGL------------SYEIKGLSPA 71
Query: 70 TKYYY------EVGVGNATRQFSFTTPPGVGP 95
T YY VG G + + TPP GP
Sbjct: 72 TTYYCRVQALSVVGAGPFSEVVACVTPPSSGP 103
|
| >3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A Length = 330 | Back alignment and structure |
|---|
Score = 42.2 bits (99), Expect = 2e-04
Identities = 34/203 (16%), Positives = 61/203 (30%), Gaps = 42/203 (20%)
Query: 130 VLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQ-----PWIWTVGNHEIDFAPQLGEA 184
++F GDL+ D + + + +W +GNH D +L +
Sbjct: 70 IVFTGDLA--------DKGEPAAYRKLRGLVEPFAAQLGAELVWVMGNH--DDRAELRKF 119
Query: 185 IPFKPFANRFHLPYRAPYSTAPFWYSIRRASAHIIVM-SCY--SAFGKYTP-QYKWLEKE 240
+ S AP IIV+ + G+ Q WL +E
Sbjct: 120 LL------------DEAPSMAPLDRVCMIDGLRIIVLDTSVPGHHHGEIRASQLGWLAEE 167
Query: 241 FPKVNRSETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVE----YKVDVVFAAHVH 296
+ ++ L H P+ + + + V + A H+H
Sbjct: 168 LAT--PAPDGTILALHHPPI----PSVLDMAVTVELRDQAALGRVLRGTDVRAILAGHLH 221
Query: 297 AYERSERMSNIAYNVTNALCSPV 319
Y + I +V +A C
Sbjct: 222 -YSTNATFVGIPVSVASATCYTQ 243
|
| >1wfo_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 130 | Back alignment and structure |
|---|
Score = 40.1 bits (94), Expect = 2e-04
Identities = 15/94 (15%), Positives = 26/94 (27%), Gaps = 19/94 (20%)
Query: 13 VIVSWVTPDEPGSN----TVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEF 68
V + W P P + + +T ++ T L+
Sbjct: 44 VRLIWQPPAAPNGIILAYQITHRLNTTTANTATVEVLAPSA---------RQYTATGLKP 94
Query: 69 DTKYYYEV------GVGNATRQFSFTTPPGVGPD 96
++ Y + + G G A TT GP
Sbjct: 95 ESVYLFRITAQTRKGWGEAAEALVVTTEKRSGPS 128
|
| >3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A Length = 274 | Back alignment and structure |
|---|
Score = 40.9 bits (96), Expect = 4e-04
Identities = 29/198 (14%), Positives = 58/198 (29%), Gaps = 31/198 (15%)
Query: 130 VLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQ-PWIWTVGNHEIDFAPQLGEAIPFK 188
V+ GD+ + R + + + + P GNH D E +
Sbjct: 45 VVVSGDIV--------NCGRPEEYQVARQILGSLNYPLYLIPGNH--DDKALFLEYLQ-- 92
Query: 189 PFANRFHLPYRAPYSTAPFWYSIRRASAHIIVM-SCY--SAFGKYTP-QYKWLEKEFPKV 244
L + ++ + ++ + S ++ G T WLE + +
Sbjct: 93 ------PLCPQLGSDANNMRCAVDDFATRLLFIDSSRAGTSKGWLTDETISWLEAQLFE- 145
Query: 245 NRSETPWLIVLMHCPL--YNSYVHHYMEGEPMRVLYEPWFVEYK-VDVVFAAHVHAYERS 301
+ P I + H PL N+ + R+L + + +F H H
Sbjct: 146 -GGDKPATIFMHHPPLPLGNAQMDPIACENGHRLL--ALVERFPSLTRIFCGHNH-SLTM 201
Query: 302 ERMSNIAYNVTNALCSPV 319
+ + V
Sbjct: 202 TQYRQALISTLPGTVHQV 219
|
| >3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A Length = 211 | Back alignment and structure |
|---|
Score = 40.2 bits (94), Expect = 5e-04
Identities = 18/90 (20%), Positives = 32/90 (35%), Gaps = 18/90 (20%)
Query: 13 VIVSWVTPDEPGSN----TVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEF 68
+IV+W P E + Y + + + N + I++L
Sbjct: 124 IIVNWQPPSEANGKITGYIIYYSTDVNAEIHDWVIEPVVGNRLTHQ--------IQELTL 175
Query: 69 DTKYYYEV------GVGNATRQFSFTTPPG 92
DT YY+++ G+G + F TP
Sbjct: 176 DTPYYFKIQARNSKGMGPMSEAVQFRTPKA 205
|
| >1va9_A DOWN syndrome cell adhesion molecule like- protein 1B; FNIII domain, dscaml1 protein, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 122 | Back alignment and structure |
|---|
Score = 38.5 bits (90), Expect = 6e-04
Identities = 14/93 (15%), Positives = 31/93 (33%), Gaps = 18/93 (19%)
Query: 13 VIVSWVTPDEPGSN------TVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDL 66
+ V+W P + N + Y + Q + + + T+++L
Sbjct: 32 IQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQYSIVEMK------ATGDSEVYTLDNL 85
Query: 67 EFDTKYYYEV------GVGNATRQFSFTTPPGV 93
+ +Y V G G ++ + + TT
Sbjct: 86 KKFAQYGVVVQAFNRAGTGPSSSEINATTLESG 118
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 407 | |||
| 2qfp_A | 424 | Purple acid phosphatase; binuclear, Fe-Zn, hydrola | 100.0 | |
| 1xzw_A | 426 | Purple acid phosphatase; hydrolase; HET: NAG FUC M | 100.0 | |
| 2yeq_A | 527 | Apased, PHOD, alkaline phosphatase D; hydrolase, p | 100.0 | |
| 3tgh_A | 342 | Glideosome-associated protein 50; phosphatase fold | 100.0 | |
| 1ute_A | 313 | Protein (II purple acid phosphatase); tartrate res | 100.0 | |
| 3ib7_A | 330 | ICC protein; metallophosphoesterase, alpha-beta fo | 99.92 | |
| 3d03_A | 274 | Phosphohydrolase; glycerophosphodiesterase, metall | 99.9 | |
| 2nxf_A | 322 | Putative dimetal phosphatase; dinuclear metal cent | 99.89 | |
| 2xmo_A | 443 | LMO2642 protein; phosphodiesterase, hydrolase; 1.7 | 99.8 | |
| 1uf3_A | 228 | Hypothetical protein TT1561; metallo-dependent pho | 99.59 | |
| 2yvt_A | 260 | Hypothetical protein AQ_1956; structural genomics, | 99.55 | |
| 2q8u_A | 336 | Exonuclease, putative; structural genomics, joint | 99.55 | |
| 1z2w_A | 192 | Vacuolar protein sorting 29; VPS29, retromer, phos | 99.46 | |
| 2a22_A | 215 | Vacuolar protein sorting 29; alpha-beta-BETA-alpha | 99.43 | |
| 3av0_A | 386 | DNA double-strand break repair protein MRE11; DNA | 99.38 | |
| 3ck2_A | 176 | Conserved uncharacterized protein (predicted phosp | 99.35 | |
| 3rl5_A | 296 | Metallophosphoesterase mpped2; alpha-beta fold, me | 99.34 | |
| 1nnw_A | 252 | Hypothetical protein; structural genomics, PSI, pr | 99.34 | |
| 3tho_B | 379 | Exonuclease, putative; adenosine triphosphate, bac | 99.32 | |
| 3qfm_A | 270 | SAPH, putative uncharacterized protein; sandwich f | 99.28 | |
| 3rqz_A | 246 | Metallophosphoesterase; PSI-biology, midwest cente | 99.15 | |
| 4fbw_A | 417 | DNA repair protein RAD32; DNA double-strand break | 99.12 | |
| 1xm7_A | 195 | Hypothetical protein AQ_1665; structural genomics, | 99.12 | |
| 3t1i_A | 431 | Double-strand break repair protein MRE11A; DNA rep | 99.11 | |
| 1s3l_A | 190 | Hypothetical protein MJ0936; phosphodiesterase, nu | 99.11 | |
| 2kkn_A | 178 | Uncharacterized protein; protein phosphatase 2A ho | 99.11 | |
| 4fbk_A | 472 | DNA repair and telomere maintenance protein NBS1, | 99.08 | |
| 1ii7_A | 333 | MRE11 nuclease; RAD50, DNA double-strand break rep | 98.99 | |
| 1su1_A | 208 | Hypothetical protein YFCE; structural genomics, ph | 98.8 | |
| 1hp1_A | 516 | 5'-nucleotidase; metallophosphatase, dinuclear, me | 98.64 | |
| 2z1a_A | 552 | 5'-nucleotidase; metal-binding, nucleotide-binding | 98.63 | |
| 3qfk_A | 527 | Uncharacterized protein; structural genomics, cent | 98.49 | |
| 4h2g_A | 546 | 5'-nucleotidase; dimer, hydrolase, phosphatase, ex | 98.43 | |
| 3ztv_A | 579 | NAD nucleotidase, NADN; hydrolase, NAD pyrophospha | 98.39 | |
| 3ive_A | 509 | Nucleotidase; structural genomics, PSI-2, protein | 98.35 | |
| 2wdc_A | 562 | SOXB, sulfur oxidation protein SOXB; sulfur-sulfur | 98.28 | |
| 1t71_A | 281 | Phosphatase, conserved HYPO; crystal, X-RAY crysta | 98.24 | |
| 3c9f_A | 557 | 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, p | 97.98 | |
| 2z06_A | 252 | Putative uncharacterized protein TTHA0625; metal b | 97.96 | |
| 1t70_A | 255 | Phosphatase; crystal, X-RAY crystallography, struc | 97.89 | |
| 3gve_A | 341 | YFKN protein; alpha-beta-BETA-alpha sandwich, stru | 97.83 | |
| 3jyf_A | 339 | 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- n | 97.7 | |
| 4h1s_A | 530 | 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo | 97.56 | |
| 1g5b_A | 221 | Serine/threonine protein phosphatase; bacteriophag | 97.41 | |
| 2dfj_A | 280 | Diadenosinetetraphosphatase; helices and strands m | 97.3 | |
| 2ede_A | 114 | Netrin receptor DCC; tumor suppressor protein DCC, | 97.2 | |
| 2edd_A | 123 | Netrin receptor DCC; tumor suppressor protein DCC, | 97.18 | |
| 1x5l_A | 111 | Ephrin type-A receptor 8; FN3 domain, structural g | 97.17 | |
| 2qjc_A | 262 | Diadenosine tetraphosphatase, putative; putative d | 97.17 | |
| 1x4y_A | 114 | Biregional cell adhesion molecule-related/DOWN- re | 97.08 | |
| 2djs_A | 108 | Ephrin type-B receptor 1; tyrosine-protein kinase | 97.02 | |
| 2ie4_C | 309 | PP2A-alpha;, serine/threonine-protein phosphatase | 96.96 | |
| 2edy_A | 103 | Receptor-type tyrosine-protein phosphatase F; LAR | 96.95 | |
| 2dm4_A | 108 | Sortilin-related receptor; beta-sandwich, sorting | 96.93 | |
| 1x4x_A | 106 | Fibronectin type-III domain containing protein 3A; | 96.88 | |
| 1x5a_A | 107 | Ephrin type-A receptor 1; tyrosine-protein kinase | 96.87 | |
| 3e0j_A | 476 | DNA polymerase subunit delta-2; DNA polymerase del | 96.85 | |
| 1x5f_A | 120 | Neogenin; RGM binding, fibronectin type III domain | 96.78 | |
| 3h63_A | 315 | Serine/threonine-protein phosphatase 5; metalloenz | 96.77 | |
| 2haz_A | 105 | N-CAM 1, neural cell adhesion molecule 1; fibronec | 96.77 | |
| 1x5j_A | 113 | Neogenin; RGM binding, fibronectin type III domain | 96.77 | |
| 1fjm_A | 330 | Protein serine/threonine phosphatase-1 (alpha ISO | 96.73 | |
| 2db8_A | 110 | Tripartite motif protein 9, isoform 2; ring finger | 96.72 | |
| 3icf_A | 335 | PPT, serine/threonine-protein phosphatase T; IRO m | 96.71 | |
| 2ee2_A | 119 | Contactin-1; neural cell surface protein F3, glyco | 96.64 | |
| 2z72_A | 342 | Protein-tyrosine-phosphatase; cold-active enzyme, | 96.63 | |
| 2e7h_A | 109 | Ephrin type-B receptor 4; FN3 domain, tyrosine- pr | 96.62 | |
| 2dle_A | 104 | Receptor-type tyrosine-protein phosphatase ETA; pr | 96.62 | |
| 2ed8_A | 106 | Netrin receptor DCC; tumor suppressor protein DCC, | 96.6 | |
| 1wk0_A | 137 | KIAA0970 protein; fibronectin type III domain, str | 96.59 | |
| 1wao_1 | 477 | Serine/threonine protein phosphatase 5; hydrolase, | 96.55 | |
| 2dkm_A | 104 | Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, | 96.54 | |
| 2crz_A | 110 | Fibronectin type-III domain containing protein 3A; | 96.53 | |
| 2ed7_A | 119 | Netrin receptor DCC; tumor suppressor protein DCC, | 96.52 | |
| 1x5z_A | 115 | Receptor-type tyrosine-protein phosphatase delta; | 96.48 | |
| 3e7a_A | 299 | PP-1A, serine/threonine-protein phosphatase PP1-al | 96.47 | |
| 1x5g_A | 116 | Neogenin; RGM binding, fibronectin type III domain | 96.46 | |
| 3ll8_A | 357 | Serine/threonine-protein phosphatase 2B catalytic | 96.41 | |
| 1x5x_A | 109 | Fibronectin type-III domain containing protein 3A; | 96.4 | |
| 2rb8_A | 104 | Tenascin; beta sheet,loop design, alternative spli | 96.35 | |
| 1wfo_A | 130 | Sidekick 2; FN3, cell adhesion, structural genomic | 96.34 | |
| 3n1f_C | 102 | Cell adhesion molecule-related/DOWN-regulated BY; | 96.33 | |
| 1aui_A | 521 | Calcineurin, serine/threonine phosphatase 2B; hydr | 96.32 | |
| 2kbg_A | 114 | N-CAM 2, neural cell adhesion molecule 2; fibronec | 96.3 | |
| 2dju_A | 106 | Receptor-type tyrosine-protein phosphatase F; LAR | 96.27 | |
| 2ee3_A | 108 | Collagen alpha-1(XX) chain; KIAA1510, structural g | 96.21 | |
| 1wfu_A | 120 | Unnamed protein product; FN3 domain, similar to 17 | 96.19 | |
| 3b83_A | 100 | Ten-D3; beta sheet, computational redesigned prote | 96.19 | |
| 2cui_A | 112 | Tenascin-X; fibronectin type III domain, extracell | 96.14 | |
| 1ujt_A | 120 | KIAA1568 protein; fibronectin type III domain, str | 96.09 | |
| 2ibg_A | 214 | CG9211-PA, GH03927P; IHOG, fibronectin type III, p | 96.07 | |
| 3tes_A | 98 | Tencon; fibronectin type III domain, FN3, consensu | 96.0 | |
| 1va9_A | 122 | DOWN syndrome cell adhesion molecule like- protein | 95.96 | |
| 2ed9_A | 124 | Netrin receptor DCC; tumor suppressor protein DCC, | 95.94 | |
| 2dn7_A | 107 | Receptor-type tyrosine-protein phosphatase F; LAR | 95.85 | |
| 2dmk_A | 127 | Midline 2 isoform 2; midline defect 2, tripartite | 95.84 | |
| 2yrz_A | 118 | Integrin beta-4; GP150, CD104 antigen, structural | 95.8 | |
| 2dlh_A | 121 | Receptor-type tyrosine-protein phosphatase delta; | 95.77 | |
| 2gee_A | 203 | Hypothetical protein; fibronectin, EIIIB, cancer, | 95.77 | |
| 3p4l_A | 211 | Neogenin; iron homeostasis, hemojuvelin receptor, | 95.75 | |
| 1x5h_A | 132 | Neogenin; RGM binding, fibronectin type III domain | 95.74 | |
| 3teu_A | 98 | Fibcon; FN3 domain, fibronectin TPYE III domain, c | 95.74 | |
| 2e3v_A | 122 | Neural cell adhesion molecule 1, 140 kDa isoform; | 95.71 | |
| 2edx_A | 134 | Protein tyrosine phosphatase, receptor type, F; LA | 95.71 | |
| 1x3d_A | 118 | Fibronectin type-III domain containing protein 3A; | 95.7 | |
| 2cum_A | 105 | Tenascin-X; hexabrachion-like, fibronectin type II | 95.69 | |
| 3k2m_C | 101 | Monobody HA4; engineered binding protein, antibody | 95.67 | |
| 2cuh_A | 115 | Tenascin-X; fibronectin type III domain, extracell | 95.63 | |
| 1x4z_A | 121 | Biregional cell adhesion molecule-related/DOWN- re | 95.37 | |
| 2h41_A | 95 | Fibronectin; beta sandwich, cell adhesion, structu | 95.36 | |
| 3f7q_A | 234 | Integrin beta-4, GP150; hemidesmosome, cell adhesi | 95.32 | |
| 1qr4_A | 186 | Protein (tenascin); fibronectin type-III, heparin, | 95.29 | |
| 3t04_D | 103 | Monobody 7C12; engineered binding protein, antibod | 95.29 | |
| 1wis_A | 124 | KIAA1514 protein; FNIII domain, sidekick-2, struct | 95.28 | |
| 2yuw_A | 110 | Myosin binding protein C, SLOW type; fibronectin I | 95.16 | |
| 2crm_A | 120 | Fibronectin type-III domain containing protein 3A; | 95.11 | |
| 2ic2_A | 115 | CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin t | 95.08 | |
| 1k85_A | 88 | Chitinase A1; fibronectin type III domain, chitin | 95.07 | |
| 1uc6_A | 109 | CNTF receptor, ciliary neurotrophic factor recepto | 95.03 | |
| 2dbj_A | 124 | Proto-oncogene tyrosine-protein kinase MER precurs | 95.0 | |
| 3qht_C | 97 | Monobody YSMB-1; fibronectin type III, yeast small | 94.97 | |
| 3qwq_B | 114 | Adnectin; cell surface receptor, tyrosine kinase, | 94.96 | |
| 1v5j_A | 108 | KIAA1355 protein, RSGI RUH-008; FN3 domain, human | 94.94 | |
| 1uem_A | 117 | KIAA1568 protein; immunoglobulin-like beta-sandwic | 94.9 | |
| 1uen_A | 125 | KIAA0343 protein; immunoglobulin-like beta-sandwic | 94.86 | |
| 1x5y_A | 111 | Myosin binding protein C, fast-type; fast MYBP-C, | 94.86 | |
| 2ocf_D | 121 | Fibronectin; estrogen receptor, LBD, monobody, est | 94.85 | |
| 1j8k_A | 94 | Fibronectin; EDA, TYPEIII domain, protein binding; | 94.77 | |
| 1uey_A | 127 | KIAA0343 protein; immunoglobulin-like beta-sandwic | 94.7 | |
| 1bpv_A | 112 | Titin, A71, connectin; fibronectin type III; NMR { | 94.69 | |
| 1wfn_A | 119 | Sidekick 2; FN3, cell adhesion, structural genomic | 94.67 | |
| 2qbw_A | 195 | PDZ-fibronectin fusion protein; fibronectin PDZ, u | 94.63 | |
| 2vkw_A | 209 | Neural cell adhesion molecule 1,140 kDa isoform; a | 94.56 | |
| 3r8q_A | 290 | Fibronectin; heparin, FNIII, heparin binding, cell | 94.33 | |
| 1wf5_A | 121 | Sidekick 2 protein; FNIII domain, structural genom | 94.2 | |
| 3n06_B | 210 | PRL-R, prolactin receptor; PH dependence, hematopo | 94.08 | |
| 1bqu_A | 215 | Protein (GP130); cytokine receptor, glycoprotein 1 | 94.05 | |
| 2yux_A | 120 | Myosin-binding protein C, SLOW-type; fibronectin I | 94.01 | |
| 2ha1_A | 201 | Fibronectin; beta sandwich, protein-protein comple | 93.8 | |
| 3mpc_A | 103 | FN3-like protein; fibronectin, FN(III), unknown fu | 93.79 | |
| 1cd9_B | 215 | G-CSF-R, protein (G-CSF receptor); class1 cytokine | 93.75 | |
| 3lpw_A | 197 | A77-A78 domain from titin; intracellular FNIII-tan | 93.66 | |
| 3p4l_A | 211 | Neogenin; iron homeostasis, hemojuvelin receptor, | 93.56 | |
| 1tdq_A | 283 | Tenascin-R; extracellular matrix, lecticans, tenas | 93.55 | |
| 2w1n_A | 238 | O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrol | 93.51 | |
| 3fl7_A | 536 | Ephrin receptor; ATP-binding, kinase, nucleotide-b | 93.48 | |
| 3t1w_A | 375 | Four-domain fibronectin fragment; human fibronecti | 93.39 | |
| 3mtr_A | 215 | N-CAM-1, NCAM-1, neural cell adhesion molecule 1; | 93.26 | |
| 1qr4_A | 186 | Protein (tenascin); fibronectin type-III, heparin, | 93.24 | |
| 1i1r_A | 303 | GP130, interleukin-6 receptor beta chain; cytokine | 93.13 | |
| 2jll_A | 389 | NCAM2, neural cell adhesion molecule 2; immunoglob | 93.11 | |
| 1tdq_A | 283 | Tenascin-R; extracellular matrix, lecticans, tenas | 93.03 | |
| 1cfb_A | 205 | Drosophila neuroglian; neural adhesion molecule; H | 92.96 | |
| 3l5i_A | 290 | Interleukin-6 receptor subunit beta; cytokine rece | 92.92 | |
| 2vkw_A | 209 | Neural cell adhesion molecule 1,140 kDa isoform; a | 92.89 | |
| 2gee_A | 203 | Hypothetical protein; fibronectin, EIIIB, cancer, | 92.82 | |
| 3r8q_A | 290 | Fibronectin; heparin, FNIII, heparin binding, cell | 92.63 | |
| 1cfb_A | 205 | Drosophila neuroglian; neural adhesion molecule; H | 92.54 | |
| 3lpw_A | 197 | A77-A78 domain from titin; intracellular FNIII-tan | 92.51 | |
| 2edb_A | 116 | Netrin receptor DCC; tumor suppressor protein DCC, | 92.15 | |
| 1q38_A | 89 | Fibronectin; amyloid fibril, anastellin, extracell | 91.33 | |
| 2b5i_B | 214 | Interleukin-2 receptor beta chain; four-helix bund | 91.17 | |
| 2d9q_B | 313 | Granulocyte colony-stimulating factor receptor; cy | 91.08 | |
| 3up1_A | 223 | Interleukin-7 receptor subunit alpha; cytokine rec | 90.81 | |
| 2ha1_A | 201 | Fibronectin; beta sandwich, protein-protein comple | 90.75 | |
| 1fnf_A | 368 | Fibronectin; RGD, extracellular matrix, cell adhes | 90.72 | |
| 1oww_A | 98 | FN, fibronectin first type III module, CIG; fibron | 90.56 | |
| 1axi_B | 236 | HGHBP, growth hormone receptor; complex (hormone-r | 90.09 | |
| 1eer_B | 227 | Epobp, erythropoietin receptor; signal transductio | 89.88 | |
| 3f7q_A | 234 | Integrin beta-4, GP150; hemidesmosome, cell adhesi | 89.77 | |
| 2ekj_A | 105 | Collagen alpha-1(XX) chain; KIAA1510, structural g | 89.38 | |
| 3t1w_A | 375 | Four-domain fibronectin fragment; human fibronecti | 89.23 | |
| 1wj3_A | 117 | KIAA1496 protein; beta sandwich, PANG, structural | 89.07 | |
| 3csg_A | 461 | MBP, maltose-binding protein monobody YS1 fusion, | 88.92 | |
| 2ibg_A | 214 | CG9211-PA, GH03927P; IHOG, fibronectin type III, p | 88.76 | |
| 1fnf_A | 368 | Fibronectin; RGD, extracellular matrix, cell adhes | 88.37 | |
| 1n26_A | 325 | IL-6 receptor alpha chain; transmembrane, glycopro | 88.19 | |
| 3lqm_A | 201 | Interleukin-10 receptor subunit beta; IL-10R2, com | 87.01 | |
| 1x5i_A | 126 | Neogenin; RGM binding, fibronectin type III domain | 86.66 | |
| 1zlg_A | 680 | Anosmin 1; insulin-like growth factor receptor Cys | 86.6 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 85.66 | |
| 4doh_R | 221 | Interleukin-20 receptor subunit alpha; IL10 family | 84.67 | |
| 3s98_A | 306 | Interferon alpha/beta receptor 1; human, type I in | 84.25 | |
| 3l5i_A | 290 | Interleukin-6 receptor subunit beta; cytokine rece | 84.19 | |
| 2jll_A | 389 | NCAM2, neural cell adhesion molecule 2; immunoglob | 84.14 | |
| 3v6o_A | 206 | Leptin receptor; receptor-antibody complex, cytoki | 83.89 | |
| 3tgx_A | 219 | Interleukin-21 receptor; class I cytokine, class I | 83.48 | |
| 3se4_A | 414 | Interferon alpha/beta receptor 1; type I interfero | 83.47 | |
| 1iar_B | 207 | Protein (interleukin-4 receptor alpha chain); cyto | 82.65 | |
| 2q7n_A | 488 | Leukemia inhibitory factor receptor; cytokine cell | 82.46 | |
| 3l5h_A | 589 | Interleukin-6 receptor subunit beta; IG-like, FNII | 82.14 | |
| 4doh_B | 206 | Interleukin-20 receptor subunit beta; IL10 family | 82.09 | |
| 1zlg_A | 680 | Anosmin 1; insulin-like growth factor receptor Cys | 81.85 | |
| 3e0g_A | 483 | Leukemia inhibitory factor receptor; IG domain, cy | 81.64 |
| >2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-73 Score=563.46 Aligned_cols=401 Identities=70% Similarity=1.238 Sum_probs=344.1
Q ss_pred CeeeccCCCCCcEEEEEEcCCCCCCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCcCC
Q 040421 1 VHITQGDHEGKGVIVSWVTPDEPGSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGVGN 80 (407)
Q Consensus 1 v~l~~g~~~~~~~~v~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~~~ 80 (407)
|||++|++++++|+|+|.|.+.++.+.|+|++.++.+..++.|++++|.+.....+++|+|+|+||+|||+|+|||+.++
T Consensus 22 v~l~~~~~~~~~~~v~W~t~~~~~~~~V~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Yrv~~~~ 101 (424)
T 2qfp_A 22 VHITQGDLVGRAMIISWVTMDEPGSSAVRYWSEKNGRKRIAKGKMSTYRFFNYSSGFIHHTTIRKLKYNTKYYYEVGLRN 101 (424)
T ss_dssp EEEEECSSSSSCEEEEEEESSSCCCCCEEEEESSSCCCEEECCEEECCBCSSCBCCEEEEEEECSCCTTCEEEEEECCSS
T ss_pred EEEEecCCCCCeEEEEEECCCCCCCCEEEEEeCCCCCceEEEEEEEEEEecCCCCCEEEEEEECCCCCCCEEEEEECCCC
Confidence 69999999889999999998777789999999988777778787776665455678999999999999999999999988
Q ss_pred ceeeEEEEcCCCCCCCCCcEEEEEecCCCCCCchhhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhh
Q 040421 81 ATRQFSFTTPPGVGPDVPYTFGLIGDLGQTYYSNRTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERN 160 (407)
Q Consensus 81 ~s~~~~F~T~p~~~~~~~~~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~ 160 (407)
+|+.++|+|+|.+++..++||+++||+|.......+++++.+...+|||||++||++|.++....+...|+.|.++++++
T Consensus 102 ~s~~~~f~T~p~~~~~~~~~f~~igD~~~~~~~~~~l~~~~~~~~~~D~vl~~GDl~y~~~~~~~~~~~~~~~~~~l~~~ 181 (424)
T 2qfp_A 102 TTRRFSFITPPQTGLDVPYTFGLIGDLGQSFDSNTTLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTERS 181 (424)
T ss_dssp SCEEEEEECCCCCCTTCCEEEEEECSCTTBHHHHHHHHHHHTCSSCCCEEEECSCCSCGGGSGGGCTHHHHHHHHHHHHH
T ss_pred ccceEEEECCCCCCCCCCeEEEEEEeCCCCCChHHHHHHHHhCCCCCCEEEEcCccccccccccccchHHHHHHHHHHHH
Confidence 89999999999877778999999999998754455677776653489999999999998764333456899999999988
Q ss_pred hccCCeEEccCCCccccCCCCCCcccccccccccccCCCCCCCCCCeEEEEecCcEEEEEEeccccCCCChHHHHHHHHh
Q 040421 161 AAYQPWIWTVGNHEIDFAPQLGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRRASAHIIVMSCYSAFGKYTPQYKWLEKE 240 (407)
Q Consensus 161 ~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ysf~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~ 240 (407)
.+.+|+++++||||+...+..++...|..|..+|.||..++....+.||+|++|+++||+||+...++...+|++||+++
T Consensus 182 ~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ys~~~g~~~~i~Ldt~~~~~~~~~Q~~WL~~~ 261 (424)
T 2qfp_A 182 VAYQPWIWTAGNHEIEFAPEINETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHIIVLSSYSAYGRGTPQYTWLKKE 261 (424)
T ss_dssp HTTSCEEECCCHHHHCCBGGGTBCSTTHHHHHHCCCCGGGGTCSSTTSEEEEETTEEEEECCTTSCCSTTSHHHHHHHHH
T ss_pred HhcCCeEeecCCcccccCCcccccccchhhhhhccCCccccCCCCCcEEEEEECCEEEEEecCCccCCCcHHHHHHHHHH
Confidence 88899999999999964332233334667888899997665556788999999999999999987766678999999999
Q ss_pred ccccCCCCCCeEEEEeeccccccCCCCCCCChhHHHHHHHHHHhCCCcEEEeccccccccccccccceeeccCCcccccC
Q 040421 241 FPKVNRSETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAYERSERMSNIAYNVTNALCSPVS 320 (407)
Q Consensus 241 L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~~~~~~~~~~g~~~~~~ 320 (407)
|+++++++++|+||++|+|+++....++.++..+++.|+++|++++|+++|+||+|.|+|++|+++..+.+.+|.|.++.
T Consensus 262 L~~~~~~~~~~~Iv~~H~P~~~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~~g~~~~~~ 341 (424)
T 2qfp_A 262 LRKVKRSETPWLIVLMHSPLYNSYNHHFMEGEAMRTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKITNGLCTPVK 341 (424)
T ss_dssp HHHCCTTTCCEEEEECSSCSSCCBSTTTTTTHHHHHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSSSCCCSCEE
T ss_pred HhhhcccCCCEEEEEeCcCceecCcccccccHHHHHHHHHHHHHhCCcEEEECChhhhheeccccCcceeccCCcccccc
Confidence 99976666789999999999987655555567789999999999999999999999999999998888777889998888
Q ss_pred CCCCceEEEeCCCCCCCCCcccCCCCCCCccceeeCcceEEEEEEeeccEEEEEEEEcCCCceeeeeeEEEEecccCCCC
Q 040421 321 DQSAPVYITIGDGGNQEGLAKEMTEPQPRYSAYREASFGHGILDVKNRTHAYFGWHRNQDDYAVEADSVWLHNRYWKPSG 400 (407)
Q Consensus 321 ~~~g~~~iv~G~gG~~~~~~~~~~~~~p~~~~~~~~~~Gf~~l~v~~~~~~~~~~~~~~~g~~~~~D~~~i~~~~~~~~~ 400 (407)
++++++||++|+||+.++....+..++|+|++|+...+||++|++.|++++.++|+++.||++++.|+|+|.|++++|..
T Consensus 342 ~~~~~vyi~~G~gg~~~~~~~~~~~~~p~~s~~~~~~~G~~~l~v~n~t~~~~~~~~~~~g~~~~~D~~~i~~~~~~~~~ 421 (424)
T 2qfp_A 342 DQSAPVYITIGDAGNYGVIDSNMIQPQPEYSAFREASFGHGMFDIKNRTHAHFSWNRNQDGVAVEADSVWFFNRHWYPVD 421 (424)
T ss_dssp CTTSCEEEEECCSCTTSCCCCCBCSSCCTTEEEEECCCEEEEEEECSSSEEEEEEEETTSCTTCCSEEEEEECTTTCCCC
T ss_pred CCCCcEEEEecCCCCccccCccCCCCCCCcceEEecCCCEEEEEEEcCcEEEEEEEECCCCCEEeeeEEEEEeccccccc
Confidence 89999999999999987654345567889999999899999999999999999999999999877899999999999976
Q ss_pred C
Q 040421 401 E 401 (407)
Q Consensus 401 ~ 401 (407)
+
T Consensus 422 ~ 422 (424)
T 2qfp_A 422 D 422 (424)
T ss_dssp C
T ss_pred c
Confidence 5
|
| >1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-73 Score=561.08 Aligned_cols=398 Identities=70% Similarity=1.267 Sum_probs=340.0
Q ss_pred CeeeccCCCCCcEEEEEEcC-CCCCCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCcC
Q 040421 1 VHITQGDHEGKGVIVSWVTP-DEPGSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGVG 79 (407)
Q Consensus 1 v~l~~g~~~~~~~~v~W~t~-~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~~ 79 (407)
|||+++++++++|+|+|.|. ..++.+.|+|+++++.+..++.++.++|++.+...+++|+|+|+||+|||+|+|||+.+
T Consensus 28 v~l~~~~~~~~~~~v~W~t~~~~~~~~~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Yrv~~g 107 (426)
T 1xzw_A 28 VHITQGDYEGRGVIISWTTPYDKAGANKVFYWSENSKSQKRAMGTVVTYKYYNYTSAFIHHCTIKDLEYDTKYYYRLGFG 107 (426)
T ss_dssp EEEEECSSSSSCEEEEEEESSCCTTTTEEEEEETTCCCCEEEECEEECCEETTEECCEEEEEEECCCCTTCEEEEEECCG
T ss_pred EEEEECCCCCCeEEEEEEeCCCCCCCCEEEEecCCCCCceEEEEEEEEEEecCCcCCEEEEEEECCCCCCCEEEEEECCC
Confidence 69999999889999999998 77788999999998877778888777676555567899999999999999999999987
Q ss_pred CceeeEEEEcCCCCCCCCCcEEEEEecCCCCCCchhhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhh
Q 040421 80 NATRQFSFTTPPGVGPDVPYTFGLIGDLGQTYYSNRTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIER 159 (407)
Q Consensus 80 ~~s~~~~F~T~p~~~~~~~~~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~ 159 (407)
.+|+.++|+|+|.+++..++||+++||+|.......+++++.+...+|||||++||++|.++....+...|+.|.+.+++
T Consensus 108 ~~s~~~~f~T~p~~~~~~~~~f~~~gD~~~~~~~~~~l~~i~~~~~~~D~vl~~GD~~y~~~~~~~~~~~~~~~~~~l~~ 187 (426)
T 1xzw_A 108 DAKRQFWFVTPPKPGPDVPYVFGLIGDIGQTHDSNTTLTHYEQNSAKGQAVLFMGDLSYSNRWPNHDNNRWDTWGRFSER 187 (426)
T ss_dssp GGCEEEEEECCCCCCTTCCEEEEEECSCTTBHHHHHHHHHHHHCTTCCSEEEECSCCCCGGGSGGGCTHHHHHHHHHHHH
T ss_pred CccceeEEECCCCCCCCCCeEEEEEEeCCCCCchHHHHHHHHhCCCCCCEEEeCCChhhcccCCcccchHHHHHHHHHHH
Confidence 78999999999987777899999999999765445667777765348999999999999876433335679999999999
Q ss_pred hhccCCeEEccCCCccccCCCCCCcccccccccccccCCCCCCCCCCeEEEEecCcEEEEEEeccccCCCChHHHHHHHH
Q 040421 160 NAAYQPWIWTVGNHEIDFAPQLGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRRASAHIIVMSCYSAFGKYTPQYKWLEK 239 (407)
Q Consensus 160 ~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ysf~~g~v~fi~Lds~~~~~~~~~Q~~WL~~ 239 (407)
+.+.+|+++++||||+...+..++...+..|..+|.||.++++...+.||+|++|+++||+||+...+..+.+|++||++
T Consensus 188 l~~~~P~~~v~GNHD~~~~~~~~~~~~~~~~~~~f~~p~~~~~~~~~~~ys~~~g~~~~i~Ldt~~~~~~~~~Q~~WL~~ 267 (426)
T 1xzw_A 188 SVAYQPWIWTAGNHEIDYAPDIGEYQPFVPFTNRYPTPHEASGSGDPLWYAIKRASAHIIVLSSYSGFVKYSPQYKWFTS 267 (426)
T ss_dssp HHTTSCEECCCCGGGCCCBGGGTBCSTTHHHHHHSCCCCGGGTCSSTTSEEEEETTEEEEECCTTSCCSTTSHHHHHHHH
T ss_pred HHhcCCEEEeccccccccCCccccccCChhheEEEeCCcccCCCCCCCeEEEEECCEEEEEeeCcccCCCCHHHHHHHHH
Confidence 88899999999999996432222233566788889999876656678899999999999999998777778999999999
Q ss_pred hccccCCCCCCeEEEEeeccccccCCCCCCCChhHHHHHHHHHHhCCCcEEEeccccccccccccccceeeccCCccccc
Q 040421 240 EFPKVNRSETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAYERSERMSNIAYNVTNALCSPV 319 (407)
Q Consensus 240 ~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~~~~~~~~~~g~~~~~ 319 (407)
+|+++++++++|+||++|+|+|+....+..++..+++.|+++|++++|+++|+||+|.|+|++|+++.++.+.+|.|.++
T Consensus 268 ~L~~~~~~~~~w~Iv~~H~P~~~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~~~r~~p~~~~~~~~~~g~~~~~ 347 (426)
T 1xzw_A 268 ELEKVNRSETPWLIVLVHAPLYNSYEAHYMEGEAMRAIFEPYFVYYKVDIVFSGHVHSYERSERVSNVAYNIVNAKCTPV 347 (426)
T ss_dssp HHHHCCTTTCCEEEEECSSCSSCCBSTTTTTTHHHHHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSTTCCCCCE
T ss_pred HHHhhhhcCCCEEEEEeccCceeCCCcccCCCHHHHHHHHHHHHHhCCCEEEEcChhhheeeeeecCccccccCCccccc
Confidence 99997666788999999999998765455566778999999999999999999999999999999998877778888888
Q ss_pred CCCCCceEEEeCCCCCCCCCcccCCCCCCCccceeeCcceEEEEEEeeccEEEEEEEEcCCCceeeeeeEEEEecccCC
Q 040421 320 SDQSAPVYITIGDGGNQEGLAKEMTEPQPRYSAYREASFGHGILDVKNRTHAYFGWHRNQDDYAVEADSVWLHNRYWKP 398 (407)
Q Consensus 320 ~~~~g~~~iv~G~gG~~~~~~~~~~~~~p~~~~~~~~~~Gf~~l~v~~~~~~~~~~~~~~~g~~~~~D~~~i~~~~~~~ 398 (407)
.++++++||++|+||+.++....+..++|+|++|+...+||++|+|.|++++.++|+++.||++++.|+|+|.|++|.|
T Consensus 348 ~~~~g~~yi~~G~gG~~~~~~~~~~~~~p~~s~~~~~~~G~~~l~v~n~t~~~~~~~~~~dg~~~~~D~~~i~~~~~~~ 426 (426)
T 1xzw_A 348 SDESAPVYITIGDGGNSEGLASEMTQPQPSYSAFREASFGHGIFDIKNRTHAHFSWHRNQDGASVEADSLWLLNRYWAS 426 (426)
T ss_dssp ECTTSCEEEEECCSCCTTCCCCCBCSSCCTTEEEEECCCEEEEEEECSSSEEEEEEEETTSCTTCCSEEEEEECSCC--
T ss_pred cCCCccEEEEeCCCccccccccccCCCCCCceeEEecCCCeEEEEEEcCCeEEEEEEECCCCCEEEeEEEEEEecccCC
Confidence 8899999999999999876533455578899999998999999999999999999999999996557999999999875
|
| >2yeq_A Apased, PHOD, alkaline phosphatase D; hydrolase, phosphodiesterase; HET: PE5; 1.93A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-39 Score=324.92 Aligned_cols=367 Identities=16% Similarity=0.160 Sum_probs=237.9
Q ss_pred eeccCCCCCcEEEEEEcCCCC---------CCCEEEEeecCCC--CceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCE
Q 040421 3 ITQGDHEGKGVIVSWVTPDEP---------GSNTVLYWAENST--LKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTK 71 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~---------~~~~v~y~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~ 71 (407)
++.|++.++++ |.|.+.... ....|+|....+. ......+.+... ....++|+|.|+||+|+|.
T Consensus 13 vasGDp~~~~v-ilWtr~~p~~~~~~~~~~~~~~v~~eva~d~~f~~~v~~g~~~a~----~~~~~t~~v~v~gL~P~t~ 87 (527)
T 2yeq_A 13 VASGDPLSDSV-VLWTRLAPDPLNGGGMPKQAVPVKWEVAKDEHFRKIVRKGTEMAK----PSLAHSVHVEADGLEPNKV 87 (527)
T ss_dssp EEEECCCSSCE-EEEEECCSBGGGTBCCCSSCEEEEEEEESSTTSSSEEEEEEEEEC----GGGTTEEEEEECSCCTTCE
T ss_pred ccccCCCCCeE-EEEEecCCcccCCCCCCCCceEEEEEEecCCccccceEeeeEEec----CCCceEEEeecCCcCCCCE
Confidence 56788877777 779996421 2346666554433 334444544332 3578999999999999999
Q ss_pred EEEEeCcC-CceeeEEEEcCCCCCCC-CCcEEEEEecCCCCCCchhhHHHhhhCCCCCceEEEcCCccccCCCCCC----
Q 040421 72 YYYEVGVG-NATRQFSFTTPPGVGPD-VPYTFGLIGDLGQTYYSNRTLTHYELNPIKGQTVLFVGDLSYADDYPFH---- 145 (407)
Q Consensus 72 Y~Y~v~~~-~~s~~~~F~T~p~~~~~-~~~~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~---- 145 (407)
|+||+..+ .+|++++|+|+|.+++. .++||+++||.+.......++.++.+. +|||+||+||++|+++....
T Consensus 88 Y~Yr~~~~~~~S~~g~frT~P~~~~~~~~~rfa~~sc~~~~~g~~~~~~~ia~~--~~D~vlhlGD~iY~d~~~~~~~~~ 165 (527)
T 2yeq_A 88 YYYRFKTGHELSPVGKTKTLPAPGANVPQMTFAFASCQQYEHGYYTAYKHMAKE--KLDLVFHLGDYIYEYGPNEYVSKT 165 (527)
T ss_dssp EEEEEEETTEECCCEEEECCCCTTCCCCCEEEEEECCCCGGGCCCHHHHHHTTS--CCSEEEECSCSSCCCCTTSSCCTT
T ss_pred EEEEEEeCCCcCCCceEEcCCCCCCCCCCeEEEEEecCCCCCCccHHHHHHHhc--CCCEEEecCCcccCCCCCcccccc
Confidence 99999876 46899999999987553 689999999998754445677777764 89999999999999874210
Q ss_pred ---------CchhhhHHHH---------HHhhhhccCCeEEccCCCccccCCCCCCccc------c-----ccccccc-c
Q 040421 146 ---------DNNRWDTWGR---------FIERNAAYQPWIWTVGNHEIDFAPQLGEAIP------F-----KPFANRF-H 195 (407)
Q Consensus 146 ---------~~~~~~~~~~---------~~~~~~~~~P~~~~~GNHD~~~~~~~~~~~~------~-----~~~~~~f-~ 195 (407)
+...++.|.. .++.+.+.+|+++++||||+..+...+.... | .++..+| .
T Consensus 166 ~~~R~~~~~e~~tl~~yr~~y~~~~~dp~lq~~~a~~P~i~~wDDHE~~nn~~~~~~~~~~~~~~f~~rr~~A~~ay~e~ 245 (527)
T 2yeq_A 166 GNVRTHNSAEIITLQDYRNRHAQYRSDANLKAAHAAFPWVVTWDDHEVENNYANKIPEKGQSVEAFVLRRAAAYQAYYEH 245 (527)
T ss_dssp CCCSCCSSSSCCSHHHHHHHHHHHHTCHHHHHHHHHSEEEECCCSTTTSTTCBTTBCSTTCCHHHHHHHHHHHHHHHHHH
T ss_pred cccccCCcccccCHHHHHHHHHHHhCCHHHHHHHhcCCEEEecccccccCCCCCCcccccCCcccHHHHHHHHHHHHHHh
Confidence 0011222222 2456677899999999999964311110000 0 1222233 3
Q ss_pred cCCCC----CCCCCCeEEEEecCc-EEEEEEeccccC----------------------CCChHHHHHHHHhccccCCCC
Q 040421 196 LPYRA----PYSTAPFWYSIRRAS-AHIIVMSCYSAF----------------------GKYTPQYKWLEKEFPKVNRSE 248 (407)
Q Consensus 196 ~P~~~----~~~~~~~~ysf~~g~-v~fi~Lds~~~~----------------------~~~~~Q~~WL~~~L~~~~~~~ 248 (407)
||... .+.....||+|++|+ ++||+||+...- ..+.+|++||+++|++ ++
T Consensus 246 ~P~~~~~~p~~~~~~~y~sf~~G~lv~~i~LDtR~yr~~~~~~~~~~~~~~~~~~~~~~~lG~~Q~~WL~~~L~~---s~ 322 (527)
T 2yeq_A 246 MPLRISSLPNGPDMQLYRHFTYGNLASFNVLDTRQYRDDQANNDGNKPPSDESRNPNRTLLGKEQEQWLFNNLGS---ST 322 (527)
T ss_dssp SCCCGGGCCBTTBCCCCEEEEETTTEEEEECCSSSSCCCCGGGSSEECCCHHHHCTTCCSSCHHHHHHHHHHHHH---CC
T ss_pred CCCCcccCCCCCCceEEEEEEcCCcceEEEEeccccccccccccccccccccccCCcccccCHHHHHHHHHHHhc---CC
Confidence 45431 112456899999999 999999995311 1368999999999997 56
Q ss_pred CCeEEEEeeccccccCCC----------CCCCChhHHHHHHHHHHhCCCc--EEEeccccccccccccccceeeccCCcc
Q 040421 249 TPWLIVLMHCPLYNSYVH----------HYMEGEPMRVLYEPWFVEYKVD--VVFAAHVHAYERSERMSNIAYNVTNALC 316 (407)
Q Consensus 249 ~~~~iv~~H~P~~~~~~~----------~~~~~~~~~~~l~~l~~~~~vd--lvl~GH~H~y~r~~~~~~~~~~~~~g~~ 316 (407)
++|+||++|+|++..... .+......|+.|.++|.+++|+ +||+||+|.+++.......
T Consensus 323 a~W~Iv~s~~p~~~~~~~~g~~~~~~~D~W~g~~~~R~~Ll~~l~~~~v~n~vvLsGDvH~~~~~~~~~~~--------- 393 (527)
T 2yeq_A 323 AHWNVLAQQIFFAKWNFGTSASPIYSMDSWDGYPAQRERVINFIKSKNLNNVVVLTGDVHASWASNLHVDF--------- 393 (527)
T ss_dssp SSEEEEECSSCCSCCCSSCSSSCCEETTSGGGSHHHHHHHHHHHHHTTCCCEEEEECSSSSEEEEEEESST---------
T ss_pred CCeEEEEeCCcccccccCCCcccccCccchhccHHHHHHHHHHHHHhCCCCEEEEEcchHHHhHhhccccc---------
Confidence 889999999999875421 1112245789999999999984 9999999999998632110
Q ss_pred cccCCCC----CceEEEeCC--CCCCCCCc---ccCCCCCCCccceeeCcceEEEEEEeeccEEEEEEEEcC-----CCc
Q 040421 317 SPVSDQS----APVYITIGD--GGNQEGLA---KEMTEPQPRYSAYREASFGHGILDVKNRTHAYFGWHRNQ-----DDY 382 (407)
Q Consensus 317 ~~~~~~~----g~~~iv~G~--gG~~~~~~---~~~~~~~p~~~~~~~~~~Gf~~l~v~~~~~~~~~~~~~~-----~g~ 382 (407)
.+++ ++-+++++- +|...... ..+...+| ...|.....||.+|+| +...++++|+... ++.
T Consensus 394 ---~~p~~~~~~~ef~~ssi~s~~~g~~~~~~~~~~~~~np-~~~~~~~~~Gy~~v~v-t~~~~~~~~~~v~~v~~~~~~ 468 (527)
T 2yeq_A 394 ---EKTSSKIFGAEFVGTSITSGGNGADKRADTDQILKENP-HIQFFNDYRGYVRCTV-TPHQWKADYRVMPFVTEPGAA 468 (527)
T ss_dssp ---TCTTSCEEEEEEECCCSSTTCSCBSBCTTHHHHHHHCT-TEEEEEBCEEEEEEEE-ETTEEEEEEEEESCSSSSCCC
T ss_pred ---cCCCCCceEEEEEcCCeeCCCCcccchhhhhhhhhcCC-cceeeeCCCCEEEEEE-eccEEEEEEEEeCCccCCCCc
Confidence 1112 233332222 11110000 00001233 3345556789999999 4667888886433 344
Q ss_pred eeeeeeEEEEe
Q 040421 383 AVEADSVWLHN 393 (407)
Q Consensus 383 ~~~~D~~~i~~ 393 (407)
+...=+|++..
T Consensus 469 ~~~~~~~~~~~ 479 (527)
T 2yeq_A 469 ISTRASFVYQK 479 (527)
T ss_dssp CEEEEEEEECS
T ss_pred ceeeeEEEEeC
Confidence 44445566533
|
| >3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-40 Score=310.26 Aligned_cols=259 Identities=14% Similarity=0.199 Sum_probs=190.0
Q ss_pred CCcEEEEEecCCCCCCchhh----HHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhH-HHHHHhhh--hccCCeEEc
Q 040421 97 VPYTFGLIGDLGQTYYSNRT----LTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDT-WGRFIERN--AAYQPWIWT 169 (407)
Q Consensus 97 ~~~~f~~~gD~~~~~~~~~~----l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~-~~~~~~~~--~~~~P~~~~ 169 (407)
..+||+++||+|.+...+.. |.++.+. .+|||||++||++|. |..+.++..|.+ |.+.++.+ ...+||+++
T Consensus 2 ~~l~f~~igD~g~g~~~q~~va~~m~~~~~~-~~pd~vl~~GD~~y~-G~~~~~d~~~~~~f~~~~~~~~~~~~~P~~~v 79 (342)
T 3tgh_A 2 CQLRFASLGDWGKDTKGQILNAKYFKQFIKN-ERVTFIVSPGSNFID-GVKGLNDPAWKNLYEDVYSEEKGDMYMPFFTV 79 (342)
T ss_dssp CCEEEEECCSCBSCCHHHHHHHHHHHHHHHH-TTCCEEEECSCSBTT-CCCSTTCTHHHHHTTTTSCCGGGTTCSEEEEC
T ss_pred ceEEEEEEecCCCCCchHHHHHHHHHHHHhh-cCCCEEEECCCcccC-CCCcCccHHHHHHHHHHhhhhhhhhCCCEEEe
Confidence 47999999999986544332 3334444 489999999999998 654334556654 33344333 346899999
Q ss_pred cCCCccccCCCCCCcccc-------------------cccccccccCCCCCCCCCCeEEEE----ec---------C---
Q 040421 170 VGNHEIDFAPQLGEAIPF-------------------KPFANRFHLPYRAPYSTAPFWYSI----RR---------A--- 214 (407)
Q Consensus 170 ~GNHD~~~~~~~~~~~~~-------------------~~~~~~f~~P~~~~~~~~~~~ysf----~~---------g--- 214 (407)
+||||+..+. ..+..+ .....+|.||. .||++ .. |
T Consensus 80 lGNHD~~~~~--~aq~~~~~~~~~~~~~~~~~~~~~~~~~~~rw~~P~--------~yY~~~~~f~~~~~~~~~~~g~~~ 149 (342)
T 3tgh_A 80 LGTRDWTGNY--NAQLLKGQGIYIEKNGETSIEKDADATNYPKWIMPN--------YWYHYFTHFTVSSGPSIVKTGHKD 149 (342)
T ss_dssp CCHHHHTSCH--HHHHHHHHC---------------CCCSSCEEECSS--------SSEEEEEEEEEC---------CEE
T ss_pred CCCCccCCCc--hHhhhhhhcccccccccccccccccccCCCCccCCc--------ceEEEEEEeeccccccccccCCCC
Confidence 9999996321 111111 22457788885 57765 22 3
Q ss_pred -cEEEEEEeccccCC----------CChHHHHHHHHhccccCCCCCCeEEEEeeccccccCCCCCCCChhHHHHHHHHHH
Q 040421 215 -SAHIIVMSCYSAFG----------KYTPQYKWLEKEFPKVNRSETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFV 283 (407)
Q Consensus 215 -~v~fi~Lds~~~~~----------~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~ 283 (407)
.++||+|||..... ...+|++||+++|+. ++|+||++|||+|+.+.. .....+++.|.++|+
T Consensus 150 ~~v~fi~LDT~~l~~~~~~~~~~~~~~~~Ql~WLe~~L~~-----~~~~IV~~HhP~~~~~~~--~~~~~l~~~l~~ll~ 222 (342)
T 3tgh_A 150 LAAAFIFIDTWVLSSNFPYKKIHEKAWNDLKSQLSVAKKI-----ADFIIVVGDQPIYSSGYS--RGSSYLAYYLLPLLK 222 (342)
T ss_dssp EEEEEEECCTTTTSTTCSCHHHHHHHHHHHHHHHHHHHHH-----CSEEEEECSSCSSCSSTT--CCCHHHHHHTHHHHH
T ss_pred ceEEEEEEeCcccccCCcccccchHHHHHHHHHHHHhhcc-----CCcEEEEECCCCCCCCCC--CCcHHHHHHHHHHHH
Confidence 48999999964221 125899999999943 469999999999987643 334667899999999
Q ss_pred hCCCcEEEeccccccccccccccceeeccCCcccccCCCCCceEEEeCCCCCCCCCcccCCCCCCCccceeeCcceEEEE
Q 040421 284 EYKVDVVFAAHVHAYERSERMSNIAYNVTNALCSPVSDQSAPVYITIGDGGNQEGLAKEMTEPQPRYSAYREASFGHGIL 363 (407)
Q Consensus 284 ~~~vdlvl~GH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~g~~~iv~G~gG~~~~~~~~~~~~~p~~~~~~~~~~Gf~~l 363 (407)
+++|+++|+||+|.|+|..+ +++.||++|+||..... .. ..++|+.|+...+||+++
T Consensus 223 ~~~VdlvlsGH~H~~~~~~~-------------------~g~~~iv~Ga~g~~~~~--~~--~~~~~s~f~~~~~Gf~~l 279 (342)
T 3tgh_A 223 DAEVDLYISGHDNNMEVIED-------------------NDMAHITCGSGSMSQGK--SG--MKNSKSLFFSSDIGFCVH 279 (342)
T ss_dssp HTTCCEEEECSSSSEEEEEE-------------------TTEEEEEECCSSCCCCC--CS--SCCTTEEEEECSSEEEEE
T ss_pred HcCCCEEEECCCcceeEEee-------------------CCcEEEEeCcccccccc--CC--CCCCcceeecCCCcEEEE
Confidence 99999999999999999973 45899999999875431 11 234688888888999999
Q ss_pred EEeeccEEEEEEEEcCCCceeeeeeEEEEecccCCCC
Q 040421 364 DVKNRTHAYFGWHRNQDDYAVEADSVWLHNRYWKPSG 400 (407)
Q Consensus 364 ~v~~~~~~~~~~~~~~~g~~~~~D~~~i~~~~~~~~~ 400 (407)
++ +++.+.++|+.+.+|+++ |+|+|.|+..++.+
T Consensus 280 ~v-~~~~l~~~~~~~~~G~vl--d~~~i~k~~~~~~~ 313 (342)
T 3tgh_A 280 EL-SNNGIVTKFVSSKKGEVI--YTHKLNIKKKKTLD 313 (342)
T ss_dssp EE-ETTEEEEEEEETTTTEEE--EEEEEECCCCSSCC
T ss_pred EE-ECCEEEEEEEECCCCcEE--EEEEEECCCCcccc
Confidence 99 466799999876899986 99999998766544
|
| >1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-33 Score=265.87 Aligned_cols=263 Identities=16% Similarity=0.253 Sum_probs=175.3
Q ss_pred CCcEEEEEecCCCCCCc----------hhhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhh----c
Q 040421 97 VPYTFGLIGDLGQTYYS----------NRTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNA----A 162 (407)
Q Consensus 97 ~~~~f~~~gD~~~~~~~----------~~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~----~ 162 (407)
..+||+++||+|..... ...+.++++. .+|||||++||++|..+........ |.+.++.+. .
T Consensus 5 ~~~~~~~isD~h~~~~~~~~~~~~~~~~~~l~~~~~~-~~~d~vv~~GD~~~~~g~~~~~~~~---~~~~~~~~~~~~~l 80 (313)
T 1ute_A 5 PILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKT-LGADFILSLGDNFYFTGVHDAKDKR---FQETFEDVFSDPSL 80 (313)
T ss_dssp CCEEEEEECSCCCCSSTTSSCHHHHHHHHHHHHHHHH-HCCSEEEECSCCSTTTCCSSTTCTH---HHHHTTTTSCSGGG
T ss_pred CceEEEEEcccCCCCCccccCchHHHHHHHHHHHHHh-cCCCEEEECCCccCcCCCCCcchHH---HHHHHHHHcCchhh
Confidence 58999999999987421 1223333333 3899999999999987643222223 333333321 2
Q ss_pred -cCCeEEccCCCccccCCCCCCcccccccccccccCCCCCCCCCCeEEEEec------CcEEEEEEeccccC--------
Q 040421 163 -YQPWIWTVGNHEIDFAPQLGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRR------ASAHIIVMSCYSAF-------- 227 (407)
Q Consensus 163 -~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ysf~~------g~v~fi~Lds~~~~-------- 227 (407)
.+|+++++||||+..+ ......|.....+|.+| ..||++.+ ++++||+||+....
T Consensus 81 ~~~p~~~v~GNHD~~~~--~~~~~~~~~~~~~~~~~--------~~~y~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~ 150 (313)
T 1ute_A 81 RNVPWHVLAGNHDHLGN--VSAQIAYSKISKRWNFP--------SPYYRLRFKIPRSNVSVAIFMLDTVTLCGNSDDFVS 150 (313)
T ss_dssp TTCCEEECCCHHHHHSC--HHHHHHGGGTSTTEECC--------SSSEEEEEECTTSSCEEEEEECCHHHHHCCGGGSTT
T ss_pred cCCCEEEECCCCccCCC--ccccccccccCCCccCc--------ccceEEEEecCCCCceEEEEEEEChHHhCcCccccc
Confidence 6899999999998531 11111122223445555 35788887 48999999985410
Q ss_pred ---------CCChHHHHHHHHhccccCCCCCCeEEEEeeccccccCCCCCCCChhHHHHHHHHHHhCCCcEEEecccccc
Q 040421 228 ---------GKYTPQYKWLEKEFPKVNRSETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAY 298 (407)
Q Consensus 228 ---------~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y 298 (407)
....+|++||++.|++. +.+|+||++|+|+++.... .....+++.|.++|++++|+++|+||+|.+
T Consensus 151 ~~~~~~~~~~~~~~q~~wL~~~L~~~---~~~~~iv~~H~p~~~~~~~--~~~~~~~~~l~~~l~~~~v~~~l~GH~H~~ 225 (313)
T 1ute_A 151 QQPERPRNLALARTQLAWIKKQLAAA---KEDYVLVAGHYPVWSIAEH--GPTHCLVKQLLPLLTTHKVTAYLCGHDHNL 225 (313)
T ss_dssp CSCCSCSCHHHHHHHHHHHHHHHHHC---CCSEEEEECSSCSSCCSSS--CCCHHHHHHTHHHHHHTTCSEEEECSSSSE
T ss_pred cccCCccccchHHHHHHHHHHHHHhC---CCCeEEEEECCCCccCCCC--CCcHHHHHHHHHHHHHcCCcEEEECChhhh
Confidence 01468999999999984 3479999999999876542 223456788999999999999999999999
Q ss_pred ccccccccceeeccCCcccccCCCCCceEEEeCCCCCCCCCcccCCCCCCCccceeeC----cceEEEEEEeeccEEEEE
Q 040421 299 ERSERMSNIAYNVTNALCSPVSDQSAPVYITIGDGGNQEGLAKEMTEPQPRYSAYREA----SFGHGILDVKNRTHAYFG 374 (407)
Q Consensus 299 ~r~~~~~~~~~~~~~g~~~~~~~~~g~~~iv~G~gG~~~~~~~~~~~~~p~~~~~~~~----~~Gf~~l~v~~~~~~~~~ 374 (407)
++..+ .+|+.||++|++|.............+.+..|... ..||++|++. ++.+.++
T Consensus 226 ~~~~~------------------~~g~~~i~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gy~~l~v~-~~~~~~~ 286 (313)
T 1ute_A 226 QYLQD------------------ENGLGFVLSGAGNFMDPSKKHLRKVPNGYLRFHFGAENSLGGFAYVEIT-PKEMSVT 286 (313)
T ss_dssp EEEEC------------------TTCCEEEEECBSSCCCCCCTTGGGSCTTCEEEEECCTTSCCEEEEEEEC-SSCEEEE
T ss_pred hhccC------------------CCCceEEEECCCcCcCccccccccCCCcccceeccCcCCCCceEEEEEE-cCEEEEE
Confidence 98863 25788999999886533210000001124444332 3799999995 5568999
Q ss_pred EEEcCCCceeeeeeEEEEecccCCCCC
Q 040421 375 WHRNQDDYAVEADSVWLHNRYWKPSGE 401 (407)
Q Consensus 375 ~~~~~~g~~~~~D~~~i~~~~~~~~~~ 401 (407)
|+. .+|+++ |+|+|.|+. .|++.
T Consensus 287 ~~~-~~g~~~--~~~~l~~~~-~~~~~ 309 (313)
T 1ute_A 287 YIE-ASGKSL--FKTKLPRRA-RSEHQ 309 (313)
T ss_dssp EEE-TTSCEE--EEEEECCCC------
T ss_pred EEc-CCCcEE--EEEEecccc-Cchhh
Confidence 986 589976 999998864 34433
|
| >3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A | Back alignment and structure |
|---|
Probab=99.92 E-value=7.1e-24 Score=201.54 Aligned_cols=240 Identities=16% Similarity=0.133 Sum_probs=156.4
Q ss_pred CCCcEEEEEecCCCCCCc---------hh----hHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhc
Q 040421 96 DVPYTFGLIGDLGQTYYS---------NR----TLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAA 162 (407)
Q Consensus 96 ~~~~~f~~~gD~~~~~~~---------~~----~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~ 162 (407)
...+||++++|+|..... .. .++.+.+...++|+||++||+++... ...+..+.+.++.+..
T Consensus 23 ~~~~ri~~iSD~H~~~~~~~~~~~~~~~~~l~~~l~~i~~~~~~~d~vi~~GDl~~~~~-----~~~~~~~~~~l~~l~~ 97 (330)
T 3ib7_A 23 RPDYVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLADKGE-----PAAYRKLRGLVEPFAA 97 (330)
T ss_dssp CCSEEEEEECCCCBCSSSCCBTTTBCHHHHHHHHHHHHHHHTCCCSEEEECSCCBTTCC-----HHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEEeCCccCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCC-----HHHHHHHHHHHHHHHh
Confidence 468999999999975321 22 23334431138999999999996422 3456666677776633
Q ss_pred --cCCeEEccCCCccccCCCCCCcccccccccccccCCCCCCCCCCeEEEEecCcEEEEEEeccccC----CCChHHHHH
Q 040421 163 --YQPWIWTVGNHEIDFAPQLGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRRASAHIIVMSCYSAF----GKYTPQYKW 236 (407)
Q Consensus 163 --~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ysf~~g~v~fi~Lds~~~~----~~~~~Q~~W 236 (407)
.+|+++++||||+.. .+...+... .......+|++++++++|++||+.... ....+|++|
T Consensus 98 ~~~~pv~~v~GNHD~~~-----------~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~q~~w 163 (330)
T 3ib7_A 98 QLGAELVWVMGNHDDRA-----------ELRKFLLDE---APSMAPLDRVCMIDGLRIIVLDTSVPGHHHGEIRASQLGW 163 (330)
T ss_dssp HHTCEEEECCCTTSCHH-----------HHHHHHHCC---CCCCSCCCEEEEETTEEEEECCCCCTTCCSBCCCHHHHHH
T ss_pred hcCCCEEEeCCCCCCHH-----------HHHHHhccc---ccccCCcceEEEeCCEEEEEecCCCCCCCCCccCHHHHHH
Confidence 689999999999731 121111110 011235679999999999999996421 246899999
Q ss_pred HHHhccccCCCCCCeEEEEeeccccccCCCCC-CCChhHHHHHHHHHHhCCCcEEEeccccccccccccccceeeccCCc
Q 040421 237 LEKEFPKVNRSETPWLIVLMHCPLYNSYVHHY-MEGEPMRVLYEPWFVEYKVDVVFAAHVHAYERSERMSNIAYNVTNAL 315 (407)
Q Consensus 237 L~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~-~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~~~~~~~~~~g~ 315 (407)
|++.|+... ...+|+++|||++....... ......++.+.+++++++++++|+||+|..+...
T Consensus 164 l~~~l~~~~---~~~~iv~~Hh~p~~~~~~~~~~~~~~~~~~l~~~l~~~~v~~v~~GH~H~~~~~~------------- 227 (330)
T 3ib7_A 164 LAEELATPA---PDGTILALHHPPIPSVLDMAVTVELRDQAALGRVLRGTDVRAILAGHLHYSTNAT------------- 227 (330)
T ss_dssp HHHHTTSCC---TTCEEEECSSCSSCCSSGGGGGGSBSCHHHHHHHHTTSSEEEEEECSSSSCEEEE-------------
T ss_pred HHHHHHhcc---cCCeEEEEECCCCCCCccccccccccCHHHHHHHHhccCceEEEECCCCCcccce-------------
Confidence 999999852 23488899999876542211 0111235678899999999999999999887443
Q ss_pred ccccCCCCCceEEEeCCCCCCCCCcccCCCCCCCccceeeCcceEEEEEEeeccEEEEEEEEcCCCc
Q 040421 316 CSPVSDQSAPVYITIGDGGNQEGLAKEMTEPQPRYSAYREASFGHGILDVKNRTHAYFGWHRNQDDY 382 (407)
Q Consensus 316 ~~~~~~~~g~~~iv~G~gG~~~~~~~~~~~~~p~~~~~~~~~~Gf~~l~v~~~~~~~~~~~~~~~g~ 382 (407)
.+++.++++|+.+..... ..+. ..........||..|++.+++ +.++++.-..+.
T Consensus 228 ------~~g~~~~~~gs~~~~~~~----~~~~-g~~~~~~~~~gy~iv~i~~~~-~~~~~v~~~~~~ 282 (330)
T 3ib7_A 228 ------FVGIPVSVASATCYTQDL----TVAA-GGTRGRDGAQGCNLVHVYPDT-VVHSVIPLGGGE 282 (330)
T ss_dssp ------ETTEEEEECCCSSCEECT----TSCT-TCCCEESCSCEEEEEEECSSC-EEEEEEECSCCC
T ss_pred ------ECCEEEEecCcceeccCC----CCCC-cceeccCCCCceEEEEEECCC-eEEEEeccCCCC
Confidence 145678888877653221 0011 112222345799999996544 778887644433
|
| >3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A | Back alignment and structure |
|---|
Probab=99.90 E-value=4.2e-23 Score=190.91 Aligned_cols=233 Identities=11% Similarity=0.045 Sum_probs=147.2
Q ss_pred cEEEEEecCCCCCC---------chhhHH----HhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccCC
Q 040421 99 YTFGLIGDLGQTYY---------SNRTLT----HYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQP 165 (407)
Q Consensus 99 ~~f~~~gD~~~~~~---------~~~~l~----~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P 165 (407)
+||++++|+|.... ....++ .+.+...++|+||++||+++... ...++.+.+.++.+ .+|
T Consensus 1 mri~~iSD~H~~~~~~~~~g~~~~~~~l~~~l~~~~~~~~~~d~vi~~GDl~~~~~-----~~~~~~~~~~l~~l--~~p 73 (274)
T 3d03_A 1 MLLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPDAVVVSGDIVNCGR-----PEEYQVARQILGSL--NYP 73 (274)
T ss_dssp CEEEEECCCCBCSTTCCBTTTBCHHHHHHHHHHHHHTCSSCCSEEEEESCCBSSCC-----HHHHHHHHHHHTTC--SSC
T ss_pred CEEEEEecCCcCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCC-----HHHHHHHHHHHHhc--CCC
Confidence 58999999998742 122333 33333126899999999996421 23455566666654 579
Q ss_pred eEEccCCCccccCCCCCCccccccccccc-ccCCCCCCCCCCeEEEEecCcEEEEEEeccccC----CCChHHHHHHHHh
Q 040421 166 WIWTVGNHEIDFAPQLGEAIPFKPFANRF-HLPYRAPYSTAPFWYSIRRASAHIIVMSCYSAF----GKYTPQYKWLEKE 240 (407)
Q Consensus 166 ~~~~~GNHD~~~~~~~~~~~~~~~~~~~f-~~P~~~~~~~~~~~ysf~~g~v~fi~Lds~~~~----~~~~~Q~~WL~~~ 240 (407)
+++++||||.... .. ..+...| .++.+ .+..+|+++.++++|++||+.... ....+|++||++.
T Consensus 74 ~~~v~GNHD~~~~--~~-----~~~~~~~~~~~~~----~~~~~~~~~~~~~~~i~ld~~~~~~~~~~~~~~~~~wl~~~ 142 (274)
T 3d03_A 74 LYLIPGNHDDKAL--FL-----EYLQPLCPQLGSD----ANNMRCAVDDFATRLLFIDSSRAGTSKGWLTDETISWLEAQ 142 (274)
T ss_dssp EEEECCTTSCHHH--HH-----HHHGGGSGGGCSC----GGGCCEEECSSSSEEEECCCCCTTCSSBCCCHHHHHHHHHH
T ss_pred EEEECCCCCCHHH--HH-----HHhhhhhcCcccC----CCceEEEEEeCCEEEEEEeCCCCCCCCCeeCHHHHHHHHHH
Confidence 9999999998421 00 0111111 11111 023578999999999999996421 2367999999999
Q ss_pred ccccCCCCCCeEEEEeeccccccCCCCC-CCChhHHHHHHHHHHhC-CCcEEEeccccccccccccccceeeccCCcccc
Q 040421 241 FPKVNRSETPWLIVLMHCPLYNSYVHHY-MEGEPMRVLYEPWFVEY-KVDVVFAAHVHAYERSERMSNIAYNVTNALCSP 318 (407)
Q Consensus 241 L~~~~~~~~~~~iv~~H~P~~~~~~~~~-~~~~~~~~~l~~l~~~~-~vdlvl~GH~H~y~r~~~~~~~~~~~~~g~~~~ 318 (407)
|++. +.+++|+++|+|++....... .......+.+.++++++ +|+++|+||+|..+...
T Consensus 143 l~~~---~~~~~iv~~H~p~~~~~~~~~~~~~~~~~~~l~~~l~~~~~v~~vl~GH~H~~~~~~---------------- 203 (274)
T 3d03_A 143 LFEG---GDKPATIFMHHPPLPLGNAQMDPIACENGHRLLALVERFPSLTRIFCGHNHSLTMTQ---------------- 203 (274)
T ss_dssp HHHH---TTSCEEEEESSCSSCCSCTTTGGGSBTTTHHHHHHHHHCTTEEEEEECSSSSCEEEE----------------
T ss_pred HHhC---CCCCEEEEECCCCcccCCcccCcccCcCHHHHHHHHHhCCCceEEEeCCCCCchhhe----------------
Confidence 9874 345899999999987543210 00112245788999999 89999999999987653
Q ss_pred cCCCCCceEEEeCCCCCCCCCcccCCCCCCCc-cceeeCcceEEEEEEeeccEEEEEEEEc
Q 040421 319 VSDQSAPVYITIGDGGNQEGLAKEMTEPQPRY-SAYREASFGHGILDVKNRTHAYFGWHRN 378 (407)
Q Consensus 319 ~~~~~g~~~iv~G~gG~~~~~~~~~~~~~p~~-~~~~~~~~Gf~~l~v~~~~~~~~~~~~~ 378 (407)
.+++.++++++.+..... . .+.+ ..+.....||..+++.++ .+.++|++.
T Consensus 204 ---~~g~~~~~~pg~~~~~~~----~--~~~~~~~~~~~~~gy~i~~i~~~-~~~~~~~~~ 254 (274)
T 3d03_A 204 ---YRQALISTLPGTVHQVPY----C--HADTDPYYDLSPASCLMHRQVGE-QWVSYQHSL 254 (274)
T ss_dssp ---ETTEEEEECCCSSCBCCC----C--SSCCSCEEBCCCCEEEEEEEETT-EEEEEEEEC
T ss_pred ---ECCEEEEEcCCcceeecc----C--CCccccccccCCCceEEEEEeCC-cEEEEEEec
Confidence 134445565544322111 0 1111 223344589999999654 588888764
|
| >2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12 | Back alignment and structure |
|---|
Probab=99.89 E-value=8.8e-23 Score=192.83 Aligned_cols=228 Identities=15% Similarity=0.131 Sum_probs=144.2
Q ss_pred CCCcEEEEEecCCCCCCc----------------hhhHHH----hhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHH
Q 040421 96 DVPYTFGLIGDLGQTYYS----------------NRTLTH----YELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGR 155 (407)
Q Consensus 96 ~~~~~f~~~gD~~~~~~~----------------~~~l~~----~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~ 155 (407)
...+||++++|+|..... ...+++ +.+ .+||+||++||+++.... .....++.+..
T Consensus 3 ~~~~~i~~isD~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~d~vi~~GD~~~~~~~--~~~~~~~~~~~ 78 (322)
T 2nxf_A 3 DPVFTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRR--ERVQCVVQLGDIIDGHNR--RRDASDRALDT 78 (322)
T ss_dssp CCSEEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHH--TTCSEEEECSCCBCTHHH--HTTCHHHHHHH
T ss_pred CCceEEEEEeeccccccCcccccccchHHHHHHHHHHHHHHHHHHHh--cCCCEEEECCCccCCCCC--cchHHHHHHHH
Confidence 357999999999987521 022322 333 389999999999964320 00112344433
Q ss_pred HHhhhh-ccCCeEEccCCCccccCCCCCCcccccccccccc-------------cCCCCCCCCCCeEEEEec-CcEEEEE
Q 040421 156 FIERNA-AYQPWIWTVGNHEIDFAPQLGEAIPFKPFANRFH-------------LPYRAPYSTAPFWYSIRR-ASAHIIV 220 (407)
Q Consensus 156 ~~~~~~-~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~-------------~P~~~~~~~~~~~ysf~~-g~v~fi~ 220 (407)
+++.+. ..+|+++++||||....+. ..+...+. +|. .+..||+|+. ++++||+
T Consensus 79 ~~~~l~~~~~p~~~v~GNHD~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~y~~~~~~~~~~i~ 146 (322)
T 2nxf_A 79 VMAELDACSVDVHHVWGNHEFYNFSR-------PSLLSSRLNSAQRTGTDTGSDLIG-----DDIYAYEFSPAPNFRFVL 146 (322)
T ss_dssp HHHHHHTTCSEEEECCCHHHHHHCCH-------HHHHTSTTCCCC------CEECGG-----GTCCCEEEEEETTEEEEE
T ss_pred HHHHHHhcCCcEEEecCCCCcccCCH-------HHHhhhhCCcccccccccccccCC-----CCceEEEEecCCCEEEEE
Confidence 443333 2579999999999831100 01111111 221 2346899998 8999999
Q ss_pred Eecccc----------------------------------------------CCCChHHHHHHHHhccccCCCCCCeEEE
Q 040421 221 MSCYSA----------------------------------------------FGKYTPQYKWLEKEFPKVNRSETPWLIV 254 (407)
Q Consensus 221 Lds~~~----------------------------------------------~~~~~~Q~~WL~~~L~~~~~~~~~~~iv 254 (407)
||+... .....+|++||+++|+.+.+ +..++||
T Consensus 147 ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~q~~wL~~~L~~~~~-~~~~~iv 225 (322)
T 2nxf_A 147 LDAYDLSVIGREEESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDH-KQERVLI 225 (322)
T ss_dssp CCTTSBCSSSSCTTSHHHHHHHHHHHHHCCCTTCTTSCSCSSSGGGGCSTTCCBCCHHHHHHHHHHHHHHHH-HTCEEEE
T ss_pred EcCceecccccCCCChhhHHHHHHHhhcCcccccccCccccccccccccccCCccCHHHHHHHHHHHHHHHh-cCCcEEE
Confidence 998541 01237899999999987532 1347899
Q ss_pred EeeccccccCCCCCCCChhHHHHHHHHHHhC-CCcEEEeccccccccccccccceeeccCCcccccCCCCCceEEEeCCC
Q 040421 255 LMHCPLYNSYVHHYMEGEPMRVLYEPWFVEY-KVDVVFAAHVHAYERSERMSNIAYNVTNALCSPVSDQSAPVYITIGDG 333 (407)
Q Consensus 255 ~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~-~vdlvl~GH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~g~~~iv~G~g 333 (407)
++|+|++....... .....++.+.++++++ +|+++|+||+|.+++... .+|+.|+++|+.
T Consensus 226 ~~H~p~~~~~~~~~-~~~~~~~~~~~ll~~~~~v~~~~~GH~H~~~~~~~------------------~~g~~~i~~~~~ 286 (322)
T 2nxf_A 226 FSHLPVHPCAADPI-CLAWNHEAVLSVLRSHQSVLCFIAGHDHDGGRCTD------------------SSGAQHITLEGV 286 (322)
T ss_dssp EESSCCCTTSSCGG-GSCTTHHHHHHHHHTCTTEEEEEECSCTTCEEEEC------------------TTSCEEEECCCG
T ss_pred EEccCCCCCCCCcc-ccccCHHHHHHHHhcCCCeEEEEcCCcCCCCceec------------------cCCceEEEecch
Confidence 99999987553210 0111356788999999 799999999999987641 245677776654
Q ss_pred CCCCCCcccCCCCCCCccceeeCcceEEEEEEeeccEEEEEEEE
Q 040421 334 GNQEGLAKEMTEPQPRYSAYREASFGHGILDVKNRTHAYFGWHR 377 (407)
Q Consensus 334 G~~~~~~~~~~~~~p~~~~~~~~~~Gf~~l~v~~~~~~~~~~~~ 377 (407)
-. . + ....||..+++.+ ..+.++.+.
T Consensus 287 ~~--~---------~------~~~~~y~~v~~~~-~~~~~~~~~ 312 (322)
T 2nxf_A 287 IE--T---------P------PHSHAFATAYLYE-DRMVMKGRG 312 (322)
T ss_dssp GG--C---------C------TTSCEEEEEEECS-SEEEEEEEE
T ss_pred hh--C---------C------CCCCcEEEEEEEC-CeEEEEecc
Confidence 11 0 0 1236899999964 457665443
|
| >2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.80 E-value=1.8e-18 Score=171.04 Aligned_cols=199 Identities=12% Similarity=0.086 Sum_probs=121.9
Q ss_pred CCCcEEEEEecCCCCCCc-----------------------hhhHHHhh---hCCCCCceEEEcCCccccCCCCCCCchh
Q 040421 96 DVPYTFGLIGDLGQTYYS-----------------------NRTLTHYE---LNPIKGQTVLFVGDLSYADDYPFHDNNR 149 (407)
Q Consensus 96 ~~~~~f~~~gD~~~~~~~-----------------------~~~l~~~~---~~~~~~d~vl~~GD~~y~~~~~~~~~~~ 149 (407)
...+||++++|+|..... ...+++++ +. .+||+||++||+++... ...
T Consensus 37 ~~~~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~d~vi~~GDl~~~~~-----~~~ 110 (443)
T 2xmo_A 37 DRNLSMVVTTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFLADVES-KKTDVLIISGDLTNNGE-----KTS 110 (443)
T ss_dssp CCCEEEEEECCCCBCCGGGBCCCHHHHHHHHTSTTCCGGGHHHHHHHHHHHHHH-HTCSEEEEESCCBSSCC-----HHH
T ss_pred CCCeEEEEEeCCCCCCccccccchhhhcccccccccccccHHHHHHHHHHHHHH-cCCCEEEECCCCCCCCC-----HHH
Confidence 468999999999985321 22333322 12 37999999999996421 234
Q ss_pred hhHHHHHHhhhhc-cCCeEEccCCCccccCCCCC--Cc-------ccccccccccccCCCC----CCCCCCeEEEEecCc
Q 040421 150 WDTWGRFIERNAA-YQPWIWTVGNHEIDFAPQLG--EA-------IPFKPFANRFHLPYRA----PYSTAPFWYSIRRAS 215 (407)
Q Consensus 150 ~~~~~~~~~~~~~-~~P~~~~~GNHD~~~~~~~~--~~-------~~~~~~~~~f~~P~~~----~~~~~~~~ysf~~g~ 215 (407)
++.+.+.++.+.. .+|+++++||||+....... .. .....|...|...... .......|+.+..++
T Consensus 111 ~~~~~~~l~~l~~~~~~~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~ 190 (443)
T 2xmo_A 111 HEELAKKLTQVEKNGTQVFVVPGNHDINNPWARKFEKDKQLPTDTISPTDFSKIYSDFGYEDAISSDEFSLSYLAAPSSK 190 (443)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCTTTSSCTTCEEEETTEEEECCCCCHHHHHHHTCCCCCTTCSEECSSSSCEEECSBSS
T ss_pred HHHHHHHHHHHHhCCCeEEEECCcCCCCCccccccCCcccccccccCHHHHHHHhhhcChhhhhccCCCCceEEEecCCC
Confidence 5556666666533 68999999999985311000 00 0001111222110000 000122344455789
Q ss_pred EEEEEEecccc------------CCCChHHHHHHHHhccccCCCCCCeEEEEeeccccccCCCCC-CCChhHHHHHHHHH
Q 040421 216 AHIIVMSCYSA------------FGKYTPQYKWLEKEFPKVNRSETPWLIVLMHCPLYNSYVHHY-MEGEPMRVLYEPWF 282 (407)
Q Consensus 216 v~fi~Lds~~~------------~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~-~~~~~~~~~l~~l~ 282 (407)
++||+||+... .....+|++||++.|+.+.. ....+||++|+|++....... ......++.+.+++
T Consensus 191 ~~~i~Lds~~~~~~~~~~~~~~~g~~~~~ql~wL~~~L~~~~~-~~~~~Iv~~H~p~~~~~~~~~~~~~~~~~~~l~~ll 269 (443)
T 2xmo_A 191 VWLLMLDTAIYKTNMQQGNPTTEGGLTAGTLDWIKESSALAKK-NGAKLIPVLHHNLTDHNDVIQKGYTINYNQQVIDAL 269 (443)
T ss_dssp EEEEECCCBCCTTHHHHTSCCCCBCCCHHHHHHHHHHHHHHHH-TTCEEEEECSSBSSCSSCC--CCSBCTTHHHHHHHH
T ss_pred EEEEEeeCCCcCcccccCCCCcCCccCHHHHHHHHHHHHHHHH-cCCeEEEEECCCCcccccccccccccccHHHHHHHH
Confidence 99999999632 12357999999999987532 234689999999976532110 00112356788999
Q ss_pred HhCCCcEEEeccccccccc
Q 040421 283 VEYKVDVVFAAHVHAYERS 301 (407)
Q Consensus 283 ~~~~vdlvl~GH~H~y~r~ 301 (407)
++++|+++|+||+|..+..
T Consensus 270 ~~~~v~lvl~GH~H~~~~~ 288 (443)
T 2xmo_A 270 TEGAMDFSLSGHIHTQNIR 288 (443)
T ss_dssp HHTTCCEEEECSSCSCEEE
T ss_pred HHcCCeEEEECCcccCchh
Confidence 9999999999999987654
|
| >1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6 | Back alignment and structure |
|---|
Probab=99.59 E-value=1.8e-15 Score=135.39 Aligned_cols=171 Identities=8% Similarity=-0.024 Sum_probs=96.1
Q ss_pred CcEEEEEecCCCCCCchhhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccCCeEEccCCCcccc
Q 040421 98 PYTFGLIGDLGQTYYSNRTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHEIDF 177 (407)
Q Consensus 98 ~~~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~~ 177 (407)
.+||+++||+|.+....+.+.+..+. .++|+||++||++.... ....+..+++.++.+ ..|+++++||||...
T Consensus 5 ~mri~~iSD~H~~~~~~~~~~~~~~~-~~~D~vi~~GDl~~~~~----~~~~~~~~~~~l~~~--~~pv~~v~GNHD~~~ 77 (228)
T 1uf3_A 5 VRYILATSNPMGDLEALEKFVKLAPD-TGADAIALIGNLMPKAA----KSRDYAAFFRILSEA--HLPTAYVPGPQDAPI 77 (228)
T ss_dssp CCEEEEEECCTTCHHHHHHHHTHHHH-HTCSEEEEESCSSCTTC----CHHHHHHHHHHHGGG--CSCEEEECCTTSCSH
T ss_pred eEEEEEEeeccCCHHHHHHHHHHHhh-cCCCEEEECCCCCCCCC----CHHHHHHHHHHHHhc--CCcEEEECCCCCchh
Confidence 58999999999864322222222222 27999999999995421 122333344444332 579999999999842
Q ss_pred CCCCCCccccccccccc----ccCCCCCCCCCCeEEEEecC-cEEEEEEeccc--cCCCCh--------HHHHHHHHhcc
Q 040421 178 APQLGEAIPFKPFANRF----HLPYRAPYSTAPFWYSIRRA-SAHIIVMSCYS--AFGKYT--------PQYKWLEKEFP 242 (407)
Q Consensus 178 ~~~~~~~~~~~~~~~~f----~~P~~~~~~~~~~~ysf~~g-~v~fi~Lds~~--~~~~~~--------~Q~~WL~~~L~ 242 (407)
. ......+ ..|... ...+. .+.++ ++.|+.+++.. .+.... .+.+|+++.|+
T Consensus 78 ~---------~~~~~~~~~~~~~~~~~--~l~~~--~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 144 (228)
T 1uf3_A 78 W---------EYLREAANVELVHPEMR--NVHET--FTFWRGPYLVAGVGGEIADEGEPEEHEALRYPAWVAEYRLKALW 144 (228)
T ss_dssp H---------HHHHHHHHHHHHCTTEE--ECBTS--EEEETTTEEEEEECSEEESSSCCBSSSSCEEEHHHHHHHHGGGG
T ss_pred H---------HHHHhhhhhhccCcceE--Ecccc--eEeeCCCcEEecCCCCcCCCCccChhhcccchhhhHHHHHHHHH
Confidence 0 0011110 011100 00011 23445 88999887532 111111 22345556665
Q ss_pred ccCCCCCCeEEEEeeccccccCCCCCCCChhHHHHHHHHHHhCCCcEEEecccc
Q 040421 243 KVNRSETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVH 296 (407)
Q Consensus 243 ~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H 296 (407)
+.. ..+.|+++|+|++...... .+ ...+..++++++++++++||+|
T Consensus 145 ~~~---~~~~il~~H~p~~~~~~~~--~~---~~~~~~~~~~~~~~~~~~GH~H 190 (228)
T 1uf3_A 145 ELK---DYPKIFLFHTMPYHKGLNE--QG---SHEVAHLIKTHNPLLVLVAGKG 190 (228)
T ss_dssp GSC---SCCEEEEESSCBCBTTTBT--TS---BHHHHHHHHHHCCSEEEECCSS
T ss_pred hCC---CCCeEEEEccCcccCCccc--cC---HHHHHHHHHHhCCCEEEEcccc
Confidence 532 2368999999987642111 11 1356677888899999999999
|
| >2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6 | Back alignment and structure |
|---|
Probab=99.55 E-value=2.7e-14 Score=130.63 Aligned_cols=184 Identities=10% Similarity=0.043 Sum_probs=97.2
Q ss_pred CcEEEEEecCCCCCCchhh-HHHhhhCCCCCceEEEcCCccccCCCCC-----------CCchh--------hhHHHHHH
Q 040421 98 PYTFGLIGDLGQTYYSNRT-LTHYELNPIKGQTVLFVGDLSYADDYPF-----------HDNNR--------WDTWGRFI 157 (407)
Q Consensus 98 ~~~f~~~gD~~~~~~~~~~-l~~~~~~~~~~d~vl~~GD~~y~~~~~~-----------~~~~~--------~~~~~~~~ 157 (407)
.+||+++||+|.+...... ++.+.+. ++|+||++||++....... ..... .+.+.+.+
T Consensus 5 ~mri~~iSDlH~~~~~~~~~l~~~~~~--~~D~vi~~GDl~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l 82 (260)
T 2yvt_A 5 PRKVLAIKNFKERFDLLPKLKGVIAEK--QPDILVVVGNILKNEALEKEYERAHLARREPNRKVIHENEHYIIETLDKFF 82 (260)
T ss_dssp CCEEEEEECCTTCGGGHHHHHHHHHHH--CCSEEEEESCCCCCHHHHHHHHHHHHTTCCCCTHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEeecCCChHHHHHHHHHHHhc--CCCEEEECCCCCCccCcchhhhhhhhhhcccchhhhhHHHHHHHHHHHHHH
Confidence 5899999999987544333 3333333 8999999999985321000 00000 02233444
Q ss_pred hhhhc-cCCeEEccCCCccccCCCCCCcccccccccccc-cCCCCCCCCCCeEEEEecCcEEEEEEeccccC-CCChHHH
Q 040421 158 ERNAA-YQPWIWTVGNHEIDFAPQLGEAIPFKPFANRFH-LPYRAPYSTAPFWYSIRRASAHIIVMSCYSAF-GKYTPQY 234 (407)
Q Consensus 158 ~~~~~-~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~-~P~~~~~~~~~~~ysf~~g~v~fi~Lds~~~~-~~~~~Q~ 234 (407)
+.+.. ..|+++++||||..... .+........ .|.. ....+ ...+.+++++|++++..... ....+++
T Consensus 83 ~~l~~~~~pv~~v~GNHD~~~~~------~~~~~~~~~~~~~~~--~~l~~-~~~~~~~~~~i~g~~~~~~~~~~~~~~~ 153 (260)
T 2yvt_A 83 REIGELGVKTFVVPGKNDAPLKI------FLRAAYEAETAYPNI--RVLHE-GFAGWRGEFEVIGFGGLLTEHEFEEDFV 153 (260)
T ss_dssp HHHHTTCSEEEEECCTTSCCHHH------HHHHHHHTTTTCTTE--EECSS-EEEEETTTEEEEEECSEEESSCCBSSSS
T ss_pred HHHHhcCCcEEEEcCCCCchhhh------hHHHHhhhccCCcce--EEecC-cceEEECCEEEEecCCCcCCCCcCHHHH
Confidence 44433 57999999999984200 0000000000 0000 00011 12367889999999853211 0111222
Q ss_pred ---------HHHHHhccccCCCCCCeEEEEeeccccccCCCCC--CCChhHHHHHHHHHHhCCCcEEEecccc
Q 040421 235 ---------KWLEKEFPKVNRSETPWLIVLMHCPLYNSYVHHY--MEGEPMRVLYEPWFVEYKVDVVFAAHVH 296 (407)
Q Consensus 235 ---------~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~--~~~~~~~~~l~~l~~~~~vdlvl~GH~H 296 (407)
+|| +.|++. .....|+++|+|++....... .........+.+++++++++++++||+|
T Consensus 154 ~~~~~~~~~~~l-~~l~~~---~~~~~Il~~H~pp~~~~~d~~~~~~~~~~~~~l~~~~~~~~~~~vl~GH~H 222 (260)
T 2yvt_A 154 LKYPRWYVEYIL-KFVNEL---KPRRLVTIFYTPPIGEFVDRTPEDPKHHGSAVVNTIIKSLNPEVAIVGHVG 222 (260)
T ss_dssp CEEEHHHHHHHG-GGGGGS---CCCEEEEEESSCCSCSSTTCBTTBSCCCSCHHHHHHHHHHCCSEEEECSSC
T ss_pred hhcchhhHHHHH-HHHHhc---CCCCEEEEECCCccccccccCcccccccCcHHHHHHHHHhCCCEEEECCcc
Confidence 455 444442 123569999999875311100 0000112356678888999999999999
|
| >2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A | Back alignment and structure |
|---|
Probab=99.55 E-value=1.1e-14 Score=138.49 Aligned_cols=190 Identities=13% Similarity=0.100 Sum_probs=98.2
Q ss_pred CCCcEEEEEecCCCC----CC--c-------hhhHHHhh---hCCCCCceEEEcCC-ccccCCCCCCCchhhhHHHHHHh
Q 040421 96 DVPYTFGLIGDLGQT----YY--S-------NRTLTHYE---LNPIKGQTVLFVGD-LSYADDYPFHDNNRWDTWGRFIE 158 (407)
Q Consensus 96 ~~~~~f~~~gD~~~~----~~--~-------~~~l~~~~---~~~~~~d~vl~~GD-~~y~~~~~~~~~~~~~~~~~~~~ 158 (407)
...+||+.++|+|.+ .. . ...+++++ .. .++|+||++|| ++. .+.+ .......+.++++
T Consensus 16 ~~~mrilh~SD~HlG~~~~~~~~~~~r~~~~~~~l~~lv~~~~~-~~~D~vliaGD~l~d-~~~~--~~~~~~~~~~~l~ 91 (336)
T 2q8u_A 16 LKELKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEK-REVDLILLTGDLLHS-RNNP--SVVALHDLLDYLK 91 (336)
T ss_dssp CCEEEEEEEECCCBTCEECTTTCCEECHHHHHHHHHHHHHHHHH-HTCSEEEEESCSBSC-SSCC--CHHHHHHHHHHHH
T ss_pred cCceEEEEECcccCCCCccccccCcChhHHHHHHHHHHHHHHHH-hCCCEEEECCccccC-CCCC--CHHHHHHHHHHHH
Confidence 368999999999976 21 1 12333332 22 38999999999 553 3321 1222344566666
Q ss_pred hhhccCCeEEccCCCccccCCCCCCcccccccccc----cccCCCCCCCCCCeEEEEecCcEEEEEEeccccC-------
Q 040421 159 RNAAYQPWIWTVGNHEIDFAPQLGEAIPFKPFANR----FHLPYRAPYSTAPFWYSIRRASAHIIVMSCYSAF------- 227 (407)
Q Consensus 159 ~~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~----f~~P~~~~~~~~~~~ysf~~g~v~fi~Lds~~~~------- 227 (407)
.+...+|+++++||||... .. .+..+... +.+-.+.. ....+.+..+++.|++++.....
T Consensus 92 ~L~~~~pv~~i~GNHD~~~---~~---~~~~~l~~~g~nv~v~~~~~---~~~~~~~~~~~v~i~glp~~~~~~~~~~~~ 162 (336)
T 2q8u_A 92 RMMRTAPVVVLPGNHDWKG---LK---LFGNFVTSISSDITFVMSFE---PVDVEAKRGQKVRILPFPYPDESEALRKNE 162 (336)
T ss_dssp HHHHHSCEEECCC---------CH---HHHHHHHHHCSSEEECCSSS---CEEEECTTSCEEEEEEECCC-------CCS
T ss_pred HHHhcCCEEEECCCCCccc---cc---cHHHHHHhcCCEEEEEeccc---ccCceEEeCCCEEEEECCCCCHHHHHHHhh
Confidence 6643389999999999842 11 01111110 11111100 00011222356888888753211
Q ss_pred CCChHHHHHHHHhccccCCCCCCeEEEEeeccccccCCCCCCCChh-H-HHHHHHHHHhCCCcEEEeccccccccc
Q 040421 228 GKYTPQYKWLEKEFPKVNRSETPWLIVLMHCPLYNSYVHHYMEGEP-M-RVLYEPWFVEYKVDVVFAAHVHAYERS 301 (407)
Q Consensus 228 ~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~-~-~~~l~~l~~~~~vdlvl~GH~H~y~r~ 301 (407)
....+|++|+.+.|...-.....+.|+++|.|+...... ..+. + ...+...+.+.++|++++||.|..+..
T Consensus 163 ~~~~~~~~~~~~~l~~~~~~~~~~~Ill~H~~~~~~~~~---~~~~~~~~~~v~~~l~~~~~d~v~~GH~H~~~~~ 235 (336)
T 2q8u_A 163 GDFRFFLESRLNKLYEEALKKEDFAIFMGHFTVEGLAGY---AGIEQGREIIINRALIPSVVDYAALGHIHSFREI 235 (336)
T ss_dssp SHHHHHHHHHHHHHHHHHHTCSSEEEEEEESEETTCC-----------CCCEECGGGSCTTSSEEEEESCSSCEEE
T ss_pred HHHHHHHHHHHHHHHHhccCCCCCEEEEECccccCCCCC---CCccchhhcccCHHHccccCCEEEEccccCceEe
Confidence 112467889888876420012358999999998753211 0000 0 001212234568999999999988765
|
| >1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A | Back alignment and structure |
|---|
Probab=99.46 E-value=1.9e-12 Score=112.83 Aligned_cols=181 Identities=13% Similarity=0.127 Sum_probs=109.0
Q ss_pred CCCcEEEEEecCCCCCC---chhhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccCCeEEccCC
Q 040421 96 DVPYTFGLIGDLGQTYY---SNRTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGN 172 (407)
Q Consensus 96 ~~~~~f~~~gD~~~~~~---~~~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GN 172 (407)
...+||+++||+|.... ....+.++.+. .++|+||++||++. ....+.++.+ ..|+++++||
T Consensus 8 ~~mm~i~~iSD~H~~~~~~~~~~~l~~~~~~-~~~d~ii~~GDl~~------------~~~~~~l~~~--~~~~~~v~GN 72 (192)
T 1z2w_A 8 RDRMLVLVLGDLHIPHRCNSLPAKFKKLLVP-GKIQHILCTGNLCT------------KESYDYLKTL--AGDVHIVRGD 72 (192)
T ss_dssp ---CEEEEECCCCBTTTCSSCCHHHHTTCCT-TSCSEEEECSCCBS------------HHHHHHHHHH--CSEEEECCCT
T ss_pred ccceEEEEEecCCCCccchhHHHHHHHHhcc-CCCCEEEEcCCCCC------------HHHHHHHHhc--CCCEEEEcCC
Confidence 34589999999997532 22334444433 37999999999982 1223334433 2589999999
Q ss_pred CccccCCCCCCcccccccccccccCCCCCCCCCCeEEEEecCcEEEEEEeccccCCCChHHHHHHHHhccccCCCCCCeE
Q 040421 173 HEIDFAPQLGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRRASAHIIVMSCYSAFGKYTPQYKWLEKEFPKVNRSETPWL 252 (407)
Q Consensus 173 HD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ysf~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~ 252 (407)
||... .+|. ...++. ..++
T Consensus 73 hD~~~-----------------~lp~---------~~~~~~-----------------------------------~~~~ 91 (192)
T 1z2w_A 73 FDENL-----------------NYPE---------QKVVTV-----------------------------------GQFK 91 (192)
T ss_dssp TCCCT-----------------TSCS---------EEEEEE-----------------------------------TTEE
T ss_pred cCccc-----------------cCCc---------ceEEEE-----------------------------------CCEE
Confidence 99731 1121 111110 1267
Q ss_pred EEEeeccccccCCCCCCCChhHHHHHHHHHHhCCCcEEEeccccccccccccccceeeccCCcccccCCCCCceEEEeCC
Q 040421 253 IVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAYERSERMSNIAYNVTNALCSPVSDQSAPVYITIGD 332 (407)
Q Consensus 253 iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~g~~~iv~G~ 332 (407)
|+++|.+++.... + .+.+..++++.+++++++||+|...... .+++.++-.|+
T Consensus 92 i~l~Hg~~~~~~~-----~---~~~l~~~~~~~~~d~vi~GHtH~~~~~~-------------------~~~~~~inpGS 144 (192)
T 1z2w_A 92 IGLIHGHQVIPWG-----D---MASLALLQRQFDVDILISGHTHKFEAFE-------------------HENKFYINPGS 144 (192)
T ss_dssp EEEECSCCCCBTT-----C---HHHHHHHHHHHSSSEEECCSSCCCEEEE-------------------ETTEEEEECCC
T ss_pred EEEECCCcCCCCC-----C---HHHHHHHHHhcCCCEEEECCcCcCccEe-------------------ECCEEEEECCc
Confidence 8888955443211 1 2345667777899999999999754321 14566777777
Q ss_pred CCCCCCCcccCCCCCCCccceeeCcceEEEEEEeeccEEEEEEEEcCCCceeeeeeEEEEe
Q 040421 333 GGNQEGLAKEMTEPQPRYSAYREASFGHGILDVKNRTHAYFGWHRNQDDYAVEADSVWLHN 393 (407)
Q Consensus 333 gG~~~~~~~~~~~~~p~~~~~~~~~~Gf~~l~v~~~~~~~~~~~~~~~g~~~~~D~~~i~~ 393 (407)
.+.+.. ... .....+|+.+++.+ ..+.++++.-.++++ ...++++.|
T Consensus 145 ~~~~~~---~~~---------~~~~~~y~il~~~~-~~~~~~~~~~~~~~~-~v~~~~~~~ 191 (192)
T 1z2w_A 145 ATGAYN---ALE---------TNIIPSFVLMDIQA-STVVTYVYQLIGDDV-KVERIEYKK 191 (192)
T ss_dssp TTCCCC---SSC---------SCCCCEEEEEEEET-TEEEEEEEEEETTEE-EEEEEEEEC
T ss_pred ccccCC---CCC---------cCCCCcEEEEEEEC-CEEEEEEEEccCCEE-EEEEEEEcc
Confidence 654321 000 01246899999964 458888876555554 467777765
|
| >2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=99.43 E-value=6.3e-12 Score=111.61 Aligned_cols=188 Identities=14% Similarity=0.128 Sum_probs=109.8
Q ss_pred CcEEEEEecCCCCCCc---hhhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccCCeEEccCCCc
Q 040421 98 PYTFGLIGDLGQTYYS---NRTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHE 174 (407)
Q Consensus 98 ~~~f~~~gD~~~~~~~---~~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD 174 (407)
.+||+++||+|.+... ...+.++.+. .++|+|+++||++. .+..+.++.+ ..|+++++||||
T Consensus 25 ~m~i~~iSD~H~~~~~~~l~~~l~~~~~~-~~~D~vi~~GDl~~------------~~~l~~l~~~--~~~v~~V~GNHD 89 (215)
T 2a22_A 25 GDLVLLIGDLKIPYGAKELPSNFRELLAT-DKINYVLCTGNVCS------------QEYVEMLKNI--TKNVYIVSGDLD 89 (215)
T ss_dssp CEEEEEECCCCTTTTCSSCCGGGHHHHHC-TTCCEEEECSCCCC------------HHHHHHHHHH--CSCEEECCCTTC
T ss_pred CcEEEEEecCCCCCChHHHHHHHHHHHhc-CCCCEEEECCCCCC------------HHHHHHHHHc--CCCEEEecCCCc
Confidence 5899999999986432 2445555444 38999999999982 1233444443 358999999999
Q ss_pred cccCCCCCCcccccccccccccCCCCCCCCCCeEEEEecCcEEEEEEeccccCCCChHHHHHHHHhccccCCCCCCeEEE
Q 040421 175 IDFAPQLGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRRASAHIIVMSCYSAFGKYTPQYKWLEKEFPKVNRSETPWLIV 254 (407)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ysf~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv 254 (407)
.... .....|. ..+.. ...++. ...+|+
T Consensus 90 ~~~~----------~~~~~~~-----------------------------~~lp~--------~~~~~~-----~~~~i~ 117 (215)
T 2a22_A 90 SAIF----------NPDPESN-----------------------------GVFPE--------YVVVQI-----GEFKIG 117 (215)
T ss_dssp CSCC----------BCCGGGT-----------------------------BCCCS--------EEEEEE-----TTEEEE
T ss_pred Cccc----------ccChhhH-----------------------------hhCCc--------eEEEec-----CCeEEE
Confidence 8421 0000000 00000 000111 126788
Q ss_pred EeeccccccCCCCCCCChhHHHHHHHHHHhCCCcEEEeccccccccccccccceeeccCCcccccCCCCCceEEEeCCCC
Q 040421 255 LMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAYERSERMSNIAYNVTNALCSPVSDQSAPVYITIGDGG 334 (407)
Q Consensus 255 ~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~g~~~iv~G~gG 334 (407)
++|.+++.... + .+.+..++++.+++++++||+|...... .+++.++-.|+.+
T Consensus 118 l~Hg~~~~~~~-----~---~~~l~~~~~~~~~d~vl~GHtH~~~~~~-------------------~~~~~~inpGS~~ 170 (215)
T 2a22_A 118 LMHGNQVLPWD-----D---PGSLEQWQRRLDCDILVTGHTHKLRVFE-------------------KNGKLFLNPGTAT 170 (215)
T ss_dssp EECSTTSSSTT-----C---HHHHHHHHHHHTCSEEEECSSCCCEEEE-------------------ETTEEEEECCCSS
T ss_pred EEcCCccCCCC-----C---HHHHHHHHhhcCCCEEEECCcCCCccEe-------------------eCCEEEEECCccc
Confidence 99965543211 1 2355667777899999999999754321 1455677777765
Q ss_pred CCCCCcccCCCCCCCccceeeCcceEEEEEEeeccEEEEEEEEcCCCceeeeeeEEEEe
Q 040421 335 NQEGLAKEMTEPQPRYSAYREASFGHGILDVKNRTHAYFGWHRNQDDYAVEADSVWLHN 393 (407)
Q Consensus 335 ~~~~~~~~~~~~~p~~~~~~~~~~Gf~~l~v~~~~~~~~~~~~~~~g~~~~~D~~~i~~ 393 (407)
.+.. ... .....+|+.+++.+ ..+.++++.-.+|++ ...+..+.|
T Consensus 171 ~~~~---~~~---------~~~~~~y~il~i~~-~~i~~~~~~~~~~~~-~v~~~~~~~ 215 (215)
T 2a22_A 171 GAFS---ALT---------PDAPPSFMLMALQG-NKVVLYVYDLRDGKT-NVAMSEFSK 215 (215)
T ss_dssp CCCC---TTS---------TTCCCEEEEEEEET-TEEEEEEEEEETTEE-EEEEEEEEC
T ss_pred ccCC---CCC---------CCCCCcEEEEEEeC-CcEEEEEEEecCCeE-EEEEEEeeC
Confidence 4321 000 01236899999964 458888876555654 356666654
|
| >3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A* | Back alignment and structure |
|---|
Probab=99.38 E-value=7.3e-12 Score=121.23 Aligned_cols=177 Identities=16% Similarity=0.048 Sum_probs=94.6
Q ss_pred CCCcEEEEEecCCCCCCc----------hhhHHHhh---hCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhc
Q 040421 96 DVPYTFGLIGDLGQTYYS----------NRTLTHYE---LNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAA 162 (407)
Q Consensus 96 ~~~~~f~~~gD~~~~~~~----------~~~l~~~~---~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~ 162 (407)
...+||++++|+|.+... ...+.+++ .. .++|+||++||++.... .....+..+.+.++.+..
T Consensus 18 ~~~mrilhiSD~Hlg~~~~~~~~r~~~~~~~l~~~v~~~~~-~~~D~VliaGDl~d~~~---p~~~~~~~~~~~l~~L~~ 93 (386)
T 3av0_A 18 GSHMMFVHIADNHLGYRQYNLDDREKDIYDSFKLCIKKILE-IKPDVVLHSGDLFNDLR---PPVKALRIAMQAFKKLHE 93 (386)
T ss_dssp CCCCEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHT-TCCSEEEECSCSBSSSS---CCHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEEccCCCCccccCcchhhHHHHHHHHHHHHHHHH-cCCCEEEECCCCCCCCC---CCHHHHHHHHHHHHHHHh
Confidence 468999999999987431 01233322 23 38999999999985432 112344556666766654
Q ss_pred -cCCeEEccCCCccccCCCCCCcccccccccccccCCCCCCCCCCeEEEEecCcEEEEEEeccccCCCChH---HHHHHH
Q 040421 163 -YQPWIWTVGNHEIDFAPQLGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRRASAHIIVMSCYSAFGKYTP---QYKWLE 238 (407)
Q Consensus 163 -~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ysf~~g~v~fi~Lds~~~~~~~~~---Q~~WL~ 238 (407)
.+|+++++||||...... .......+...+..-. ...++..+-+++.+++++..... .... +++|+.
T Consensus 94 ~~~pv~~v~GNHD~~~~~~--~~~~~~~l~~~v~~l~------~~~v~~~~~~~v~i~gl~~~~~~-~~~~~~~~l~~l~ 164 (386)
T 3av0_A 94 NNIKVYIVAGNHEMPRRLG--EESPLALLKDYVKILD------GKDVINVNGEEIFICGTYYHKKS-KREEMLDKLKNFE 164 (386)
T ss_dssp TTCEEEECCCGGGSCSSTT--SCCGGGGGTTTCEECS------EEEEEEETTEEEEEEEECCCCST-THHHHHHHHHHHH
T ss_pred cCCcEEEEcCCCCCCcccc--ccCHHHHHHHHeEEcC------CCcEEEeCCCCEEEEeCCCCCHH-HHHHHHHHHHHhh
Confidence 489999999999842111 0000000111011100 01122222246888888864321 1122 333343
Q ss_pred HhccccCCCCCCeEEEEeeccccccCCCCCCCChhHHHHHHHHHHhCCCcEEEeccccccc
Q 040421 239 KEFPKVNRSETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAYE 299 (407)
Q Consensus 239 ~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~ 299 (407)
..+. ...+.|+++|+|+.......+. . .+. .+. ++|++++||+|..+
T Consensus 165 ~~~~-----~~~~~Ill~H~~~~~~~~~~~~--~----~~~-~l~--~~d~v~~GH~H~~~ 211 (386)
T 3av0_A 165 SEAK-----NYKKKILMLHQGINPYIPLDYE--L----EHF-DLP--KFSYYALGHIHKRI 211 (386)
T ss_dssp HHHH-----TCSSEEEEECCCCTTTSSSSCS--S----CGG-GSC--CCSEEEECSCCSCE
T ss_pred hhcc-----cCCCEEEEECcCccccCCCCcc--c----CHH-Hhh--hCCeEEccCCCCCc
Confidence 3332 2246899999997542111110 0 011 122 39999999999874
|
| >3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=99.35 E-value=2.7e-11 Score=104.03 Aligned_cols=162 Identities=12% Similarity=0.034 Sum_probs=100.5
Q ss_pred CCcEEEEEecCCCCCCchhhHHHhhhCC-CCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccCCeEEccCCCcc
Q 040421 97 VPYTFGLIGDLGQTYYSNRTLTHYELNP-IKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHEI 175 (407)
Q Consensus 97 ~~~~f~~~gD~~~~~~~~~~l~~~~~~~-~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~ 175 (407)
..+|++++||+|.. ...++++.+.. .++|+|+++||+.+. .++.+.. |+++++||||.
T Consensus 5 ~~m~i~~isD~H~~---~~~~~~~~~~~~~~~d~i~~~GD~~~~----------------~l~~l~~--~~~~v~GNhD~ 63 (176)
T 3ck2_A 5 AKQTIIVMSDSHGD---SLIVEEVRDRYVGKVDAVFHNGDSELR----------------PDSPLWE--GIRVVKGNMDF 63 (176)
T ss_dssp CCEEEEEECCCTTC---HHHHHHHHHHHTTTSSEEEECSCCCSC----------------TTCGGGT--TEEECCCTTCC
T ss_pred cCcEEEEEecCCCC---HHHHHHHHHHhhcCCCEEEECCCCchH----------------HHHhhhC--CeEEecCcccc
Confidence 35899999999954 23333333211 178999999997421 1122222 89999999997
Q ss_pred ccCCCCCCcccccccccccccCCCCCCCCCCeEEEEecCcEEEEEEeccccCCCChHHHHHHHHhccccCCCCCCeEEEE
Q 040421 176 DFAPQLGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRRASAHIIVMSCYSAFGKYTPQYKWLEKEFPKVNRSETPWLIVL 255 (407)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ysf~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~ 255 (407)
.. .+|. .. .+.- ...+|++
T Consensus 64 ~~-----------------~~p~---------~~------------------------------~~~~-----~~~~i~~ 82 (176)
T 3ck2_A 64 YA-----------------GYPE---------RL------------------------------VTEL-----GSTKIIQ 82 (176)
T ss_dssp ST-----------------TCCS---------EE------------------------------EEEE-----TTEEEEE
T ss_pred hh-----------------cCCc---------EE------------------------------EEEE-----CCeEEEE
Confidence 31 0121 00 0110 1257889
Q ss_pred eeccccccCCCCCCCChhHHHHHHHHHHhCCCcEEEeccccccccccccccceeeccCCcccccCCCCCceEEEeCCCCC
Q 040421 256 MHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAYERSERMSNIAYNVTNALCSPVSDQSAPVYITIGDGGN 335 (407)
Q Consensus 256 ~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~g~~~iv~G~gG~ 335 (407)
+|.|++.... .. +.+..++++++++++++||+|...... .+++.++-.|+.|.
T Consensus 83 ~Hg~~~~~~~----~~----~~l~~~~~~~~~d~vi~GHtH~~~~~~-------------------~~~~~~inpGs~~~ 135 (176)
T 3ck2_A 83 THGHLFDINF----NF----QKLDYWAQEEEAAICLYGHLHVPSAWL-------------------EGKILFLNPGSISQ 135 (176)
T ss_dssp ECSGGGTTTT----CS----HHHHHHHHHTTCSEEECCSSCCEEEEE-------------------ETTEEEEEECCSSS
T ss_pred ECCCccCCCC----CH----HHHHHHHHhcCCCEEEECCcCCCCcEE-------------------ECCEEEEECCCCCc
Confidence 9998865321 11 345677788999999999999764332 14566777777664
Q ss_pred CCCCcccCCCCCCCccceeeCcceEEEEEEeeccEEEEEEEEcCCCcee
Q 040421 336 QEGLAKEMTEPQPRYSAYREASFGHGILDVKNRTHAYFGWHRNQDDYAV 384 (407)
Q Consensus 336 ~~~~~~~~~~~~p~~~~~~~~~~Gf~~l~v~~~~~~~~~~~~~~~g~~~ 384 (407)
+.. .. ...+|+.+++. +..+.+++++ .+|+++
T Consensus 136 ~~~-------~~--------~~~~y~il~~~-~~~~~v~~~~-~~~~~~ 167 (176)
T 3ck2_A 136 PRG-------TI--------RECLYARVEID-DSYFKVDFLT-RDHEVY 167 (176)
T ss_dssp CCT-------TC--------CSCCEEEEEEC-SSEEEEEEEC-TTSCBC
T ss_pred CCC-------CC--------CCCeEEEEEEc-CCEEEEEEEE-ECCEEc
Confidence 311 01 12689999995 4568888876 568765
|
| >3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A* | Back alignment and structure |
|---|
Probab=99.34 E-value=5.9e-12 Score=116.00 Aligned_cols=204 Identities=14% Similarity=0.088 Sum_probs=106.3
Q ss_pred CCCCcEEEEEecCCCCCCchhhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccCCeEEccCCCc
Q 040421 95 PDVPYTFGLIGDLGQTYYSNRTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHE 174 (407)
Q Consensus 95 ~~~~~~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD 174 (407)
....+||+++||+|..... + +. .++|+||++||++.... ......+.+.++.+. ..|+++++||||
T Consensus 56 ~~~~mri~~iSD~H~~~~~---l----~i-~~~D~vi~aGDl~~~g~-----~~e~~~~~~~L~~l~-~~~v~~V~GNHD 121 (296)
T 3rl5_A 56 PAGHTRFVCISDTRSRTDG---I----QM-PYGDILLHTGDFTELGL-----PSEVKKFNDWLGNLP-YEYKIVIAGNHE 121 (296)
T ss_dssp CTTEEEEEEEBCCTTCCTT---C----CC-CSCSEEEECSCCSSSCC-----HHHHHHHHHHHHTSC-CSEEEECCCTTC
T ss_pred CCCCeEEEEEeeCCCCcch---h----cc-CCCCEEEECCcccCCCC-----HHHHHHHHHHHHhCC-CCeEEEEcCCcc
Confidence 3467999999999987532 1 22 37999999999996421 233444555555542 246899999999
Q ss_pred cccCCCCCCc---ccccccc----------ccc-ccCCCCCCCCCCeEEEEecCcEEEEEEeccccCCCC---hHHHHHH
Q 040421 175 IDFAPQLGEA---IPFKPFA----------NRF-HLPYRAPYSTAPFWYSIRRASAHIIVMSCYSAFGKY---TPQYKWL 237 (407)
Q Consensus 175 ~~~~~~~~~~---~~~~~~~----------~~f-~~P~~~~~~~~~~~ysf~~g~v~fi~Lds~~~~~~~---~~Q~~WL 237 (407)
+..+...-+. ..+..+. ..+ .++.+ .-...+. +..+++++|++......+... .++.+++
T Consensus 122 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~L~~~--~~~i~Gl~i~Gsp~tP~~~~~~f~~~~~~~~ 198 (296)
T 3rl5_A 122 LTFDKEFMADLVKQDYYRFPSVSKLKPEDFDNVQSLLTN-SIYLQDS--EVTVKGFRIYGAPWTPWFNGWGFNLPRGQSL 198 (296)
T ss_dssp GGGCHHHHHHHTTSCGGGSHHHHTCCHHHHTTTGGGCTT-SEECSSE--EEEETTEEEEEECCBCC--CCTTBCCTTHHH
T ss_pred cccchhhhhhhhcccccccccccccccchhhhHhhhcCC-eEEecCC--cEEECCEEEEEecCCCCCCCcCCCcchHHHH
Confidence 9533110000 0000000 000 01110 0001122 344578999885543222211 1122233
Q ss_pred HHhccccCCCCCCeEEEEeeccccccCCCCCCCC-hhHHHHHHHHH-HhCCCcEEEeccccccccccccccceeeccCCc
Q 040421 238 EKEFPKVNRSETPWLIVLMHCPLYNSYVHHYMEG-EPMRVLYEPWF-VEYKVDVVFAAHVHAYERSERMSNIAYNVTNAL 315 (407)
Q Consensus 238 ~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~-~~~~~~l~~l~-~~~~vdlvl~GH~H~y~r~~~~~~~~~~~~~g~ 315 (407)
.+.+... .....|+++|.|++.......... ..-.+.+..++ ++++.+++++||+|.......
T Consensus 199 ~~~~~~i---p~~~dILvTH~PP~g~~D~~~~~~~~~G~~~L~~~i~~~~~p~l~v~GH~H~~~~~~~------------ 263 (296)
T 3rl5_A 199 LDKWNLI---PEGTDILMTHGPPLGFRDWVPKELQRVGCVELLNTVQRRVRPKLHVFGGIHEGYGTMT------------ 263 (296)
T ss_dssp HHHHTTS---CTTCSEEEESSCBTTSSCEEGGGTEECSBHHHHHHHHHTTCCSEEEECSCGGGCEEEE------------
T ss_pred HHHHhhC---CCCCeEEEECCCccccccccccccCcCChHHHHHHHHHhcCCCEEEECCccCCCceEE------------
Confidence 3333332 123468999999987532110000 00113455555 689999999999997432211
Q ss_pred ccccCCCCCceEEEeCCCCCC
Q 040421 316 CSPVSDQSAPVYITIGDGGNQ 336 (407)
Q Consensus 316 ~~~~~~~~g~~~iv~G~gG~~ 336 (407)
.+++++|-.|+-|..
T Consensus 264 ------~g~t~vvNpGs~~~~ 278 (296)
T 3rl5_A 264 ------DGYTTYINASTCTVS 278 (296)
T ss_dssp ------CSSCEEEECBCSCTT
T ss_pred ------ECCEEEEECCcCCcC
Confidence 245667767766653
|
| >1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A | Back alignment and structure |
|---|
Probab=99.34 E-value=4.4e-12 Score=115.39 Aligned_cols=190 Identities=8% Similarity=-0.086 Sum_probs=99.0
Q ss_pred cEEEEEecCCCCCCch-hhHHHhh---hCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccCCeEEccCCCc
Q 040421 99 YTFGLIGDLGQTYYSN-RTLTHYE---LNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHE 174 (407)
Q Consensus 99 ~~f~~~gD~~~~~~~~-~~l~~~~---~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD 174 (407)
+||+++||+|...... ..++.+. ....++|+||++||++.... .. .+..+.+..+....|+++++||||
T Consensus 2 m~i~~isD~H~~~~~l~~~l~~~~~~~~~~~~~d~ii~~GD~~~~g~----~~---~~~~~~l~~l~~~~~~~~v~GNhD 74 (252)
T 1nnw_A 2 VYVAVLANIAGNLPALTAALSRIEEMREEGYEIEKYYILGNIVGLFP----YP---KEVIEVIKDLTKKENVKIIRGKYD 74 (252)
T ss_dssp CEEEEEECCTTCHHHHHHHHHHHHHHHHTTCCEEEEEEESCSSSSSS----CH---HHHHHHHHHHHHHSCEEEECCHHH
T ss_pred cEEEEEeecCCCHHHHHHHHHHHHhhhhccCCCCEEEEeCccCCCCC----CH---HHHHHHHHhhHhhcCeeEEecchH
Confidence 6899999999753322 2233333 32116899999999995321 11 233444444443368999999999
Q ss_pred cccCCCCCCcccccccccccccCCCCCCCCCCeEEEEecCcEEEEEEecc--ccCCCChHHHHHHHHhccccCCCCCCeE
Q 040421 175 IDFAPQLGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRRASAHIIVMSCY--SAFGKYTPQYKWLEKEFPKVNRSETPWL 252 (407)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ysf~~g~v~fi~Lds~--~~~~~~~~Q~~WL~~~L~~~~~~~~~~~ 252 (407)
.......... ..+. +. . .++..... ..+. ..-....+|++||++........-....
T Consensus 75 ~~~~~~~~~~---~~~~-----~~--------~--~~~~~~~~---~~~~~~~~~~l~~~~~~~L~~lp~~~~~~~~~~~ 133 (252)
T 1nnw_A 75 QIIAMSDPHA---TDPG-----YI--------D--KLELPGHV---KKALKFTWEKLGHEGREYLRDLPIYLVDKIGGNE 133 (252)
T ss_dssp HHHHHSCTTC---SSSG-----GG--------G--GSSCCHHH---HHHHHHHHHHHHHHHHHHHHTSCSCEEEEETTEE
T ss_pred HHhhcccccc---CCcc-----cc--------c--chhhhHHH---HHHHHHHHHHCCHHHHHHHHhCCceEEEeeCCcE
Confidence 7421000000 0000 00 0 00000000 0000 0001235788999874432211112247
Q ss_pred EEEeeccccccCCCCCCCChhHHHHHHHHHHhC-CCcEEEeccccccccccccccceeeccCCcccccCCCCCceEEEeC
Q 040421 253 IVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEY-KVDVVFAAHVHAYERSERMSNIAYNVTNALCSPVSDQSAPVYITIG 331 (407)
Q Consensus 253 iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~-~vdlvl~GH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~g~~~iv~G 331 (407)
|+++|++++...... .......+.+..++.++ +++++++||+|...... .+++.+|..|
T Consensus 134 i~~~H~~p~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~vi~GHtH~~~~~~-------------------~~~~~~in~G 193 (252)
T 1nnw_A 134 VFGVYGSPINPFDGE-VLAEQPTSYYEAIMRPVKDYEMLIVASPMYPVDAM-------------------TRYGRVVCPG 193 (252)
T ss_dssp EEEESSCSSCTTTCC-CCSSCCHHHHHHHHGGGTTSSEEEESTTCSEEEEE-------------------ETTEEEEEEC
T ss_pred EEEEcCCCCCCcccc-cCCCCCHHHHHHHHhcCCCCCEEEECCccccceEe-------------------cCCeEEEECC
Confidence 888898874322111 11111124667788888 99999999999754332 1456778888
Q ss_pred CCCCC
Q 040421 332 DGGNQ 336 (407)
Q Consensus 332 ~gG~~ 336 (407)
+.|.+
T Consensus 194 s~~~~ 198 (252)
T 1nnw_A 194 SVGFP 198 (252)
T ss_dssp CSSSC
T ss_pred CccCC
Confidence 87653
|
| >3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C | Back alignment and structure |
|---|
Probab=99.32 E-value=9e-12 Score=120.21 Aligned_cols=190 Identities=13% Similarity=0.101 Sum_probs=100.6
Q ss_pred cEEEEEecCCCCCC----c---------hhhHHHhh---hCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhc
Q 040421 99 YTFGLIGDLGQTYY----S---------NRTLTHYE---LNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAA 162 (407)
Q Consensus 99 ~~f~~~gD~~~~~~----~---------~~~l~~~~---~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~ 162 (407)
+||++++|+|.+.. . ...++++. .. .+||+||++||++++... .....+..+.+.++.+..
T Consensus 1 mrilh~SD~Hlg~~~~~~~~g~~~~~~~~~~l~~l~~~~~~-~~~D~vliaGDl~hd~~~--~~~~~~~~~~~~l~~l~~ 77 (379)
T 3tho_B 1 MKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEK-REVDLILLTGDLLHSRNN--PSVVALHDLLDYLKRMMR 77 (379)
T ss_dssp CEEEEECCCCBTCEECSSSSCEECHHHHHHHHHHHHHHHHH-HTCSEEEECSCCBSCSSS--CCHHHHHHHHHHHHHHHH
T ss_pred CeEEEEcccCCCCCccccccCcChhHHHHHHHHHHHHHHHh-cCCCEEEECCCccccCCC--CCHHHHHHHHHHHHHHHh
Confidence 68999999998754 1 12333332 22 389999999999943221 122344556666666654
Q ss_pred cCCeEEccCCCccccCCCCCCcccccccccccccCCCCCCCCCCeEEEEe--cC-cEEEEEEeccccCC----CChHHHH
Q 040421 163 YQPWIWTVGNHEIDFAPQLGEAIPFKPFANRFHLPYRAPYSTAPFWYSIR--RA-SAHIIVMSCYSAFG----KYTPQYK 235 (407)
Q Consensus 163 ~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ysf~--~g-~v~fi~Lds~~~~~----~~~~Q~~ 235 (407)
.+|+++++||||.... ..+..... .++.+..-.....-+.+. .| .+.+..+.-..... ....+.+
T Consensus 78 ~~~v~~i~GNHD~~~~------~~~~~~~~--~~~~~~~~~~~~~~v~l~~~~G~~v~i~glp~~~~~~~~~~~~~~~~~ 149 (379)
T 3tho_B 78 TAPVVVLPGNQDWKGL------KLFGNFVT--SISSDITFVMSFEPVDVEAKRGQKVRILPFPYPDESEALRKNEGDFRF 149 (379)
T ss_dssp HSCEEECCCTTSCTTH------HHHHHHHH--TTCSSEEECCSSCCEEEECTTCCEEEEEEECCCCCC----CHHHHHHH
T ss_pred CCCEEEEcCCCccccC------cccccccc--ccCCcceeecccceEEEEcCCCCEEEEEECCCCCHHHHhhhhccchHH
Confidence 4899999999996310 00000000 011110000000112232 23 47777775422110 1246788
Q ss_pred HHHHhcccc---CCCCCCeEEEEeeccccccCCCCCCCCh-hHHHHHHHHHHhCCCcEEEeccccccccc
Q 040421 236 WLEKEFPKV---NRSETPWLIVLMHCPLYNSYVHHYMEGE-PMRVLYEPWFVEYKVDVVFAAHVHAYERS 301 (407)
Q Consensus 236 WL~~~L~~~---~~~~~~~~iv~~H~P~~~~~~~~~~~~~-~~~~~l~~l~~~~~vdlvl~GH~H~y~r~ 301 (407)
|+.+.|+.. ......+.|+++|.++...... ...+ .+...+...+...++|+++.||.|..+..
T Consensus 150 ~l~~~l~~~~~~~~~~~~~~I~l~H~~v~g~~~~--~~se~~~~~~v~~~~~~~~~dyvalGH~H~~q~~ 217 (379)
T 3tho_B 150 FLESRLNKLYEEALKKEDFAIFMGHFTVEGLAGY--AGIEQGREIIINRALIPSVVDYAALGHIHSFREI 217 (379)
T ss_dssp HHHHHHHHHHHHHHTCSSEEEEEEESCBSCCCC---------CSCCBCGGGSCTTSSEEEEESCSSCEEE
T ss_pred HHHHHHHHHHHHhcCCCCCeEEEEeccccCCccC--CCCccccccccCHHHcCcCCCEEEcccccCCeEe
Confidence 998888721 1123457899999997543220 0000 00012222233468999999999998644
|
| >3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A* | Back alignment and structure |
|---|
Probab=99.28 E-value=4.4e-11 Score=109.83 Aligned_cols=220 Identities=10% Similarity=0.053 Sum_probs=116.9
Q ss_pred CCCcEEEEEecCCCCCCchh-hHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccCCeEEccCCCc
Q 040421 96 DVPYTFGLIGDLGQTYYSNR-TLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHE 174 (407)
Q Consensus 96 ~~~~~f~~~gD~~~~~~~~~-~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD 174 (407)
....|++++||+|....... .++.+.+. ++|.|+++||++.... ...+..+.++.+ .|+++++||||
T Consensus 9 ~~~~~i~~iSDiHg~~~~l~~vl~~~~~~--~~D~ii~~GDlv~~g~-------~~~~~~~~l~~~---~~~~~v~GNhD 76 (270)
T 3qfm_A 9 MDMTKIALLSDIHGNTTALEAVLADARQL--GVDEYWLLGDILMPGT-------GRRRILDLLDQL---PITARVLGNWE 76 (270)
T ss_dssp --CEEEEEECCCTTCHHHHHHHHHHHHHT--TCCEEEECSCCSSSSS-------CSHHHHHHHHTS---CEEEECCCHHH
T ss_pred ccccEEEEEecCCCCHHHHHHHHHHHHhc--CCCEEEEcCCCCCCCC-------CHHHHHHHHHcc---CCEEEEcCChH
Confidence 35789999999997543222 23333333 7999999999995421 113334444433 47899999999
Q ss_pred cccCCCCCCcccccccccccccCCCCCCCCCCeEEEEecCcEEEEEEeccccCCCChHHHHHHHHhccccCCCCCCeEEE
Q 040421 175 IDFAPQLGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRRASAHIIVMSCYSAFGKYTPQYKWLEKEFPKVNRSETPWLIV 254 (407)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ysf~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv 254 (407)
..... .....+.++.. ...+. .. .+. ...-....++++||++.-......-....|+
T Consensus 77 ~~~~~---------~~~~~~~~~~~-----~~~~~----~~----~~~-~~~~~L~~~~~~~L~~LP~~~~~~~~g~~i~ 133 (270)
T 3qfm_A 77 DSLWH---------GVRKELDSTRP-----SQRYL----LR----QCQ-YVLEEISLEEIEVLHNQPLQIHRQFGDLTVG 133 (270)
T ss_dssp HHHHH---------HHTTCSCTTSH-----HHHHH----HH----HHH-HHHTTSCHHHHHHHHSCCSEEEEEETTEEEE
T ss_pred HHHHH---------hhccccCCCcH-----HHHHH----HH----HHH-HHHHHcCHHHHHHHHhCCCceEEEECCcEEE
Confidence 84210 00000000000 00000 00 000 0011245788999986543321111225677
Q ss_pred EeeccccccCCCCCCCChhHHHHHHHHHHhCCCcEEEeccccccccccccccceeeccCCcccccCCCCCceEEEeCCCC
Q 040421 255 LMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAYERSERMSNIAYNVTNALCSPVSDQSAPVYITIGDGG 334 (407)
Q Consensus 255 ~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~g~~~iv~G~gG 334 (407)
++|..+..... .......-.+.+..++.+.++|++|+||+|...... ..++..+|-.|+.|
T Consensus 134 lvHg~p~~~~~-~~~~~~~~~~~l~~~~~~~~~d~~i~GHtH~~~~~~------------------~~~~~~~iNpGSvg 194 (270)
T 3qfm_A 134 ISHHLPDKNWG-RELIHTGKQEEFDRLVTHPPCDIAVYGHIHQQLLRY------------------GTGGQLIVNPGSIG 194 (270)
T ss_dssp EESSBTTBSSS-STTSTTCCHHHHHHTTTTTTCSEEECCSSCSEEEEE------------------CTTSCEEEEECCSS
T ss_pred EEECCCCCCCC-ceecCCCcHHHHHHHhcccCCCEEEECCcCchHhee------------------ccCCEEEEECCCcc
Confidence 88876543211 111111123466777888899999999999533221 02466788899988
Q ss_pred CCCCCcccCCCCCCCccceeeCcceEEEEEEeeccEEEEEEEEc
Q 040421 335 NQEGLAKEMTEPQPRYSAYREASFGHGILDVKNRTHAYFGWHRN 378 (407)
Q Consensus 335 ~~~~~~~~~~~~~p~~~~~~~~~~Gf~~l~v~~~~~~~~~~~~~ 378 (407)
.+... .+.++ ......|++|++.+++...++|.+.
T Consensus 195 ~pr~~-----~~~~~----~~~~asyaild~~~~~~~~v~~~rv 229 (270)
T 3qfm_A 195 QPFFL-----DAQLR----KDLRAQYMILEFDDKGLVDMDFRRV 229 (270)
T ss_dssp SCCCS-----STTGG----GCCCEEEEEEEEETTEEEEEEEEEE
T ss_pred CCCCC-----Ccccc----CCCCCEEEEEEecCCCceEEEEEEe
Confidence 75321 01000 0123679999996555456777653
|
| >3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} SCOP: d.159.1.0 | Back alignment and structure |
|---|
Probab=99.15 E-value=1.6e-10 Score=104.69 Aligned_cols=153 Identities=15% Similarity=0.178 Sum_probs=85.2
Q ss_pred CCcEEEEEecCCCCCCchhhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccCCeEEccCCCccc
Q 040421 97 VPYTFGLIGDLGQTYYSNRTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHEID 176 (407)
Q Consensus 97 ~~~~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~ 176 (407)
..+|++++||+|... ..+.++.+...++|.++++||++.... .-.+..+.+..+ .++++++||||..
T Consensus 2 ~~mri~~isDiHg~~---~~l~~~l~~~~~~d~ii~~GDl~~~g~-------~~~~~~~~l~~~---~~~~~v~GNhD~~ 68 (246)
T 3rqz_A 2 NAMRILIISDVHANL---VALEAVLSDAGRVDDIWSLGDIVGYGP-------RPRECVELVRVL---APNISVIGNHDWA 68 (246)
T ss_dssp CCCCEEEECCCTTCH---HHHHHHHHHHCSCSEEEECSCCSSSSS-------CHHHHHHHHHHH---CSSEECCCHHHHH
T ss_pred CCcEEEEEeecCCCH---HHHHHHHHhccCCCEEEECCCcCCCCC-------CHHHHHHHHHhc---CCCEEEeCchHHH
Confidence 368999999999543 334433332127899999999995321 112334444433 2368999999985
Q ss_pred cCCCCCCcccccccccccccCCCCCCCCCCeEEEEecCcEEEEEEeccccCCCChHHHHHHHHhccccCCCCCCeEEEEe
Q 040421 177 FAPQLGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRRASAHIIVMSCYSAFGKYTPQYKWLEKEFPKVNRSETPWLIVLM 256 (407)
Q Consensus 177 ~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ysf~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~ 256 (407)
...... . ..+. + ... ..+.. ..-....++++||++....... . .++++
T Consensus 69 ~~~~~~-------~-~~~~-~---------------~~~---~~~~~-~~~~l~~~~~~~L~~lp~~~~~-~---~i~~~ 116 (246)
T 3rqz_A 69 CIGRLS-------L-DEFN-P---------------VAR---FASYW-TTMQLQAEHLQYLESLPNRMID-G---DWTVV 116 (246)
T ss_dssp HTCCCC-------C-C--C-G---------------GGG---CHHHH-HHHHCCHHHHHHHHHCCSEEEE-T---TEEEE
T ss_pred HhccCC-------c-cccC-H---------------HHH---HHHHH-HHHHcCHHHHHHHHhCCcEEEE-C---CEEEE
Confidence 311000 0 0000 0 000 00000 0002356889999875443221 1 47778
Q ss_pred eccccccCCCCCCCChhHHHHHHHHHHhCCCcEEEecccccc
Q 040421 257 HCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAY 298 (407)
Q Consensus 257 H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y 298 (407)
|.++..... .+... ...+..+|++++++++|+||+|.-
T Consensus 117 Hg~p~~~~~-~~~~~---~~~~~~~l~~~~~~l~i~GHtH~p 154 (246)
T 3rqz_A 117 HGSPRHPIW-EYIYN---ARIAALNFPAFDTPLCFVGHTHVP 154 (246)
T ss_dssp SSCSSSTTT-CCCCS---HHHHHHHGGGCCSSEEECCSSSSE
T ss_pred ECCcCCccc-cccCC---hHHHHHHHhccCCCEEEECCcCcc
Confidence 887764321 11111 245677889999999999999963
|
| >4fbw_A DNA repair protein RAD32; DNA double-strand break repair, nuclease, hydrolase; HET: DNA; 2.20A {Schizosaccharomyces pombe} PDB: 4fcx_B* | Back alignment and structure |
|---|
Probab=99.12 E-value=4.4e-09 Score=101.49 Aligned_cols=247 Identities=11% Similarity=0.025 Sum_probs=121.0
Q ss_pred CCCCcEEEEEecCCCCCCc---------hhhHHH----hhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhh--
Q 040421 95 PDVPYTFGLIGDLGQTYYS---------NRTLTH----YELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIER-- 159 (407)
Q Consensus 95 ~~~~~~f~~~gD~~~~~~~---------~~~l~~----~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~-- 159 (407)
+...+||++++|+|.+... ...+++ +.+ .+||+||++||++..... .......+.+.++.
T Consensus 10 ~~~~mrilhiSDlHLg~~~~~~~~~~d~~~~l~~lv~~~~~--~~~D~VliaGDLfd~~~p---~~~~~~~~~~~lr~~~ 84 (417)
T 4fbw_A 10 NENTIRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARE--RDVDMILLGGDIFHDNKP---SRKALYQALRSLRLNC 84 (417)
T ss_dssp CTTCEEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHH--TTCSEEEECSCCBSSSSC---CHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEEEcCCCCCcccccccchhHHHHHHHHHHHHHh--cCCCEEEEcCccccCCCC---CHHHHHHHHHHHHHhc
Confidence 3468999999999987431 122333 333 389999999999865321 22223333444333
Q ss_pred ----------h----------------------hccCCeEEccCCCccccCCCCCCcccccccccccccCCC----CCC-
Q 040421 160 ----------N----------------------AAYQPWIWTVGNHEIDFAPQLGEAIPFKPFANRFHLPYR----APY- 202 (407)
Q Consensus 160 ----------~----------------------~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~----~~~- 202 (407)
| ...+|+|++.||||....... ......+..|.. +..
T Consensus 85 ~g~~~~~~e~L~d~~~~~~~~~~~~~n~~d~~~~~gIpV~~I~GNHD~~~~~~~------~s~~~lL~~~g~v~l~g~~~ 158 (417)
T 4fbw_A 85 LGDKPCELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDPSGDGR------YSALDILQVTGLVNYFGRVP 158 (417)
T ss_dssp BSSCCCCCEECC------------CCGGGCTTBCBSSCEEECCCGGGC-----C------CCHHHHHHHTTSCEECCCCC
T ss_pred ccCCcccceeccchhhhcccccccccccccccccCCCeEEEEecCCCCcccccc------ccHHHHhccCCeEEEeCCcc
Confidence 2 136899999999998421110 000011111110 000
Q ss_pred CCCCe---EEEEecCc--EEEEEEeccccCCCChHH-HHHHHHhccc-cC---CCCCCeEEEEeeccccccCCCCCCCCh
Q 040421 203 STAPF---WYSIRRAS--AHIIVMSCYSAFGKYTPQ-YKWLEKEFPK-VN---RSETPWLIVLMHCPLYNSYVHHYMEGE 272 (407)
Q Consensus 203 ~~~~~---~ysf~~g~--v~fi~Lds~~~~~~~~~Q-~~WL~~~L~~-~~---~~~~~~~iv~~H~P~~~~~~~~~~~~~ 272 (407)
..++. -..+.-|. +.+..+.- .. ++. ..++.+.... .. .....+.|++.|..........+. .
T Consensus 159 ~~~~i~~~pv~l~~g~~~valyG~~~----~~-d~rl~r~~~~~~v~~~~p~~~~~~~~nIlvlH~~~~~~~~~~yi-p- 231 (417)
T 4fbw_A 159 ENDNIVVSPILLQKGFTKLALYGISN----VR-DERLYHSFRENKVKFLRPDLYRDEWFNLLTVHQNHSAHTPTSYL-P- 231 (417)
T ss_dssp ---CEEECCEEEEETTEEEEEEEECC----CC-HHHHHHHHHTTCEEEEEESTTTTTSEEEEEEESCSSCSSSSSSC-C-
T ss_pred cCCceeEEeEEEEecCceEEEEeccC----Cc-hhhhhhhhhhhhhhhcCcccccCCceEEEEecCCccCCCCcccC-c-
Confidence 00000 01122233 34444432 11 222 1344333222 11 123457899999876543221110 1
Q ss_pred hHHHHHHHHHHhCCCcEEEeccccccccccccccceeeccCCcccccCCCCCceEEEeCCCCCCCCCcccCCCCCCCccc
Q 040421 273 PMRVLYEPWFVEYKVDVVFAAHVHAYERSERMSNIAYNVTNALCSPVSDQSAPVYITIGDGGNQEGLAKEMTEPQPRYSA 352 (407)
Q Consensus 273 ~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~g~~~iv~G~gG~~~~~~~~~~~~~p~~~~ 352 (407)
.-+...++|+|+.||.|..+...... ..+++..+-.|+..... .+.
T Consensus 232 -------~~l~~~~~DyvalGH~H~~~~~~~~~---------------~~~g~~i~~PGS~~~~s------------~~e 277 (417)
T 4fbw_A 232 -------ESFIQDFYDFVLWGHEHECLIDGSYN---------------PTQKFTVVQPGSTIATS------------LSP 277 (417)
T ss_dssp -------GGGSCTTCSEEEEESCCSCEEEEEEE---------------TTTTEEEEECCCSSCSS------------CCH
T ss_pred -------hhHhhcCCCEEEecCccccceecccc---------------CCCCEEEEECCCCCcCC------------Ccc
Confidence 12445689999999999876442100 01333344445443211 010
Q ss_pred eeeCcceEEEEEEeeccEEEEEEEEcCCCceeeeeeEEEEec
Q 040421 353 YREASFGHGILDVKNRTHAYFGWHRNQDDYAVEADSVWLHNR 394 (407)
Q Consensus 353 ~~~~~~Gf~~l~v~~~~~~~~~~~~~~~g~~~~~D~~~i~~~ 394 (407)
-.....||..|++.+ ..+.++++.-..-......++.|...
T Consensus 278 ~E~~~kg~~lvei~~-~~~~~e~i~l~~~Rpf~~~~v~L~~~ 318 (417)
T 4fbw_A 278 GETAPKHCGILNITG-KDFHLEKIRLRTVRPFIMKDIILSEV 318 (417)
T ss_dssp HHHSCCEEEEEEEET-TEEEEEEEECSSSCCEEEEEEEGGGC
T ss_pred ccCCCCEEEEEEEEC-CEEEEEEEECCCcccEEEEEEEeecc
Confidence 001247999999964 45888887643334344566666543
|
| >1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initi midwest center for structural genomics, PSI, MCSG, unknown; 2.40A {Aquifex aeolicus} SCOP: d.159.1.8 | Back alignment and structure |
|---|
Probab=99.12 E-value=2.4e-10 Score=99.75 Aligned_cols=140 Identities=17% Similarity=0.177 Sum_probs=83.4
Q ss_pred CcEEEEEecCCCCCCchh----------h----HHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhcc
Q 040421 98 PYTFGLIGDLGQTYYSNR----------T----LTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAY 163 (407)
Q Consensus 98 ~~~f~~~gD~~~~~~~~~----------~----l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (407)
.++|+++||+|.+..... . ++.+.+...++|+|+++||++... ..+....+.++.+.
T Consensus 1 ~~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vi~~GDl~~~~-------~~~~~~~~~l~~l~-- 71 (195)
T 1xm7_A 1 NAMMYFISDTHFYHENIINLNPEVRFKGFEIVILTNLLKVLKPEDTLYHLGDFTWHF-------NDKNEYLRIWKALP-- 71 (195)
T ss_dssp CCCEEEEBCCCBTCTTHHHHSTTTCCTTHHHHHHHHHHTTCCTTCEEEECSCCBSCS-------CCTTSHHHHHHHSS--
T ss_pred CcEEEEEeccccCCCccccccCCCCHHHHHHHHHHHHHHhCCCCCEEEECCCCCCCc-------hhHHHHHHHHHHCC--
Confidence 368999999997643211 1 122222223799999999999642 11233445555542
Q ss_pred CCeEEccCCCccccCCCCCCcccccccccccccCCCCCCCCCCeEEEEecCcEEEEEEeccccCCCChHHHHHHHHhccc
Q 040421 164 QPWIWTVGNHEIDFAPQLGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRRASAHIIVMSCYSAFGKYTPQYKWLEKEFPK 243 (407)
Q Consensus 164 ~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ysf~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~ 243 (407)
.|+++++||||... ..+...| -+ +. +..|| ++
T Consensus 72 ~~~~~v~GNhD~~~----------~~~~~~~--------------~~----------l~----------~~~~l----~~ 103 (195)
T 1xm7_A 72 GRKILVMGNHDKDK----------ESLKEYF--------------DE----------IY----------DFYKI----IE 103 (195)
T ss_dssp SEEEEECCTTCCCH----------HHHTTTC--------------SE----------EE----------SSEEE----EE
T ss_pred CCEEEEeCCCCCch----------hhhhhhh--------------hc----------hh----------HHHHH----Hh
Confidence 48999999999731 0111111 00 10 11122 11
Q ss_pred cCCCCCCeEEEEeeccccccCCCCCCCChhHHHHHHHHHHhCCCcEEEeccccccccc
Q 040421 244 VNRSETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAYERS 301 (407)
Q Consensus 244 ~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~ 301 (407)
. ...+|+++|+|++......+ ....+.+..++.+++++++|+||+|.....
T Consensus 104 ~----~~~~i~~~H~~~~~~~~~~~---~~~~~~l~~~~~~~~~~~vi~GHtH~~~~~ 154 (195)
T 1xm7_A 104 H----KGKRILLSHYPAKDPITERY---PDRQEMVREIYFKENCDLLIHGHVHWNREG 154 (195)
T ss_dssp E----TTEEEEEESSCSSCSSCCSC---HHHHHHHHHHHHHTTCSEEEECCCCCCSCC
T ss_pred c----CCcEEEEEccCCcCCCcccc---cchHHHHHHHHHHcCCcEEEECCcCCCCcc
Confidence 1 12689999999876443211 223567888899999999999999976543
|
| >3t1i_A Double-strand break repair protein MRE11A; DNA repair, MRN complex, metallophosphatase, exonuclease, endonuclease, RAD50, NBS1, hydrolase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.11 E-value=6.8e-09 Score=100.59 Aligned_cols=78 Identities=15% Similarity=0.164 Sum_probs=51.9
Q ss_pred CCCCcEEEEEecCCCCCCch---------hhHHHhh---hCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhh--
Q 040421 95 PDVPYTFGLIGDLGQTYYSN---------RTLTHYE---LNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERN-- 160 (407)
Q Consensus 95 ~~~~~~f~~~gD~~~~~~~~---------~~l~~~~---~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~-- 160 (407)
....+||++++|+|.+.... ..+++++ .. .+||+||++||++.... ........+.+.++.+
T Consensus 29 ~~~~mrilhiSDlHLg~~~~~~~~~~d~~~~l~~ll~~~~~-~~~D~VliaGDlfd~~~---~~~~~~~~~~~~L~r~~~ 104 (431)
T 3t1i_A 29 DENTFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQE-NEVDFILLGGDLFHENK---PSRKTLHTCLELLRKYCM 104 (431)
T ss_dssp GGGEEEEEEECCCCBTTTSSCTTTTTHHHHHHHHHHHHHHH-TTCSEEEECSCCBSSSS---CCHHHHHHHHHHHHHHHB
T ss_pred CCCCEEEEEEeccCCCCcccccchhhhHHHHHHHHHHHHhh-cCCCEEEEcCccccCCC---CCHHHHHHHHHHHHHHhc
Confidence 35789999999999874321 1233322 22 38999999999986532 1223444455555543
Q ss_pred --------------------------------hccCCeEEccCCCccc
Q 040421 161 --------------------------------AAYQPWIWTVGNHEID 176 (407)
Q Consensus 161 --------------------------------~~~~P~~~~~GNHD~~ 176 (407)
...+|++++.||||..
T Consensus 105 ~~~~~~~~~lsd~~~~~~~~~~~~~ny~d~n~~~~ipV~~I~GNHD~~ 152 (431)
T 3t1i_A 105 GDRPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSIHGNHDDP 152 (431)
T ss_dssp CSSCCCCEECSCC------------------CCBCSCEEECCCSSSCC
T ss_pred cCCcccceeccchhhccccccccccccccccccCCCcEEEEccCCCCc
Confidence 1369999999999984
|
| >1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A | Back alignment and structure |
|---|
Probab=99.11 E-value=2.8e-10 Score=98.78 Aligned_cols=65 Identities=17% Similarity=0.138 Sum_probs=41.4
Q ss_pred CCC-cEEEEEecCCCCCCch-hhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccCCeEEccCCC
Q 040421 96 DVP-YTFGLIGDLGQTYYSN-RTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNH 173 (407)
Q Consensus 96 ~~~-~~f~~~gD~~~~~~~~-~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNH 173 (407)
... +||+++||+|...... +.++.+.+. ++|+|+++||++. . ...+.++.+ ..|+++++|||
T Consensus 22 ~~g~m~i~~iSD~Hg~~~~l~~~l~~~~~~--~~D~ii~~GDl~~--------~----~~~~~l~~l--~~~~~~V~GNh 85 (190)
T 1s3l_A 22 FQGHMKIGIMSDTHDHLPNIRKAIEIFNDE--NVETVIHCGDFVS--------L----FVIKEFENL--NANIIATYGNN 85 (190)
T ss_dssp ----CEEEEECCCTTCHHHHHHHHHHHHHS--CCSEEEECSCCCS--------T----HHHHHGGGC--SSEEEEECCTT
T ss_pred hcCCeEEEEEeeCCCCHHHHHHHHHHHhhc--CCCEEEECCCCCC--------H----HHHHHHHhc--CCCEEEEeCCC
Confidence 344 9999999999542211 223333333 7999999999972 1 123333332 46999999999
Q ss_pred ccc
Q 040421 174 EID 176 (407)
Q Consensus 174 D~~ 176 (407)
|..
T Consensus 86 D~~ 88 (190)
T 1s3l_A 86 DGE 88 (190)
T ss_dssp CCC
T ss_pred cch
Confidence 974
|
| >2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=99.11 E-value=3.2e-09 Score=91.01 Aligned_cols=63 Identities=16% Similarity=0.040 Sum_probs=41.5
Q ss_pred CCcEEEEEecCCCCCC---chhhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccCCeEEccCCC
Q 040421 97 VPYTFGLIGDLGQTYY---SNRTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNH 173 (407)
Q Consensus 97 ~~~~f~~~gD~~~~~~---~~~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNH 173 (407)
..+||+++||+|...+ ..+.++++. . ++|+|+++||++.. +..+.++.+ ..|+++++|||
T Consensus 21 ~mmri~~iSD~Hg~~~~~~l~~~l~~~~-~--~~D~ii~~GD~~~~------------~~~~~l~~~--~~~v~~V~GNh 83 (178)
T 2kkn_A 21 GVKRFLLISDSHVPVRMASLPDEILNSL-K--EYDGVIGLGDYVDL------------DTVILLEKF--SKEFYGVHGNM 83 (178)
T ss_dssp -CEEEEEECCCCBTTTTCCCCHHHHHGG-G--GCSEEEESSCBSCH------------HHHHHHHHH--TSSEEECCCSS
T ss_pred cceEEEEEecccCCCCHHHHHHHHHHHh-c--CCCEEEECCCCCCH------------HHHHHHHhc--CCCEEEEECCC
Confidence 3489999999994221 123334333 2 79999999999831 233344443 25999999999
Q ss_pred ccc
Q 040421 174 EID 176 (407)
Q Consensus 174 D~~ 176 (407)
|..
T Consensus 84 D~~ 86 (178)
T 2kkn_A 84 DYP 86 (178)
T ss_dssp SCG
T ss_pred CcH
Confidence 973
|
| >4fbk_A DNA repair and telomere maintenance protein NBS1, protein RAD32 chimeric protein; DNA double-strand break repair, nuclease; HET: DNA; 2.38A {Schizosaccharomyces pombe} PDB: 4fbq_A* | Back alignment and structure |
|---|
Probab=99.08 E-value=6e-09 Score=101.35 Aligned_cols=77 Identities=13% Similarity=0.033 Sum_probs=49.9
Q ss_pred CCCCcEEEEEecCCCCCCc---------hhhHHH----hhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhh--
Q 040421 95 PDVPYTFGLIGDLGQTYYS---------NRTLTH----YELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIER-- 159 (407)
Q Consensus 95 ~~~~~~f~~~gD~~~~~~~---------~~~l~~----~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~-- 159 (407)
....+||++++|+|.+... ...+++ +.+. +||+||++||++..... .......+.+.++.
T Consensus 73 ~~~~mrilhiSDlHLG~~~~~~~~~~d~~~~l~~lv~~~~~~--~~D~VliaGDLfd~~~p---s~~a~~~~~~~Lr~~~ 147 (472)
T 4fbk_A 73 SENTIRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARER--DVDMILLGGDIFHDNKP---SRKALYQALRSLRLNC 147 (472)
T ss_dssp CTTCEEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHT--TCSEEEECSCSBSSSSC---CHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEEecccCCCcccCcccchhHHHHHHHHHHHHHhc--CCCEEEEcCccccCCCC---CHHHHHHHHHHHHHhc
Confidence 3578999999999987432 122332 3333 89999999999865331 22223333444332
Q ss_pred ----------h----------------------hccCCeEEccCCCccc
Q 040421 160 ----------N----------------------AAYQPWIWTVGNHEID 176 (407)
Q Consensus 160 ----------~----------------------~~~~P~~~~~GNHD~~ 176 (407)
| ...+|+|++.||||..
T Consensus 148 ~g~~~~~~e~L~d~~~~~~~~~~~~vn~~dp~~~~gIpVf~I~GNHD~~ 196 (472)
T 4fbk_A 148 LGDKPCELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDP 196 (472)
T ss_dssp BSSCCCCCEEEEEC-----CCCSCSSSTTCTTBCBSSCEEECCCCCCSC
T ss_pred ccCCcchheecchhhhhcccccccccccccccccCCCcEEEEecCCCCc
Confidence 1 1368999999999984
|
| >1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A | Back alignment and structure |
|---|
Probab=98.99 E-value=2.6e-09 Score=101.16 Aligned_cols=74 Identities=15% Similarity=0.160 Sum_probs=49.8
Q ss_pred cEEEEEecCCCCCCch----------hhHHHhh---hCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhc-cC
Q 040421 99 YTFGLIGDLGQTYYSN----------RTLTHYE---LNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAA-YQ 164 (407)
Q Consensus 99 ~~f~~~gD~~~~~~~~----------~~l~~~~---~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~-~~ 164 (407)
+||++++|+|.+.... ..+++++ .. .++|+||++||++.... .....+..+.+.++.+.. .+
T Consensus 1 mkilh~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~D~vl~~GDl~d~~~---~~~~~~~~~~~~l~~l~~~~~ 76 (333)
T 1ii7_A 1 MKFAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQ-ENVDFILIAGDLFHSSR---PSPGTLKKAIALLQIPKEHSI 76 (333)
T ss_dssp CEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHH-TTCSEEEEESCSBSSSS---CCHHHHHHHHHHHHHHHTTTC
T ss_pred CEEEEEcccCCCCcccCCchhhHHHHHHHHHHHHHHHh-cCCCEEEECCCcCCCCC---CCHHHHHHHHHHHHHHHHCCC
Confidence 5899999999875320 2222222 22 38999999999986432 112344556666766653 58
Q ss_pred CeEEccCCCccc
Q 040421 165 PWIWTVGNHEID 176 (407)
Q Consensus 165 P~~~~~GNHD~~ 176 (407)
|+++++||||..
T Consensus 77 ~v~~v~GNHD~~ 88 (333)
T 1ii7_A 77 PVFAIEGNHDRT 88 (333)
T ss_dssp CEEEECCTTTCC
T ss_pred cEEEeCCcCCCc
Confidence 999999999984
|
| >1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7 | Back alignment and structure |
|---|
Probab=98.80 E-value=6.7e-08 Score=84.99 Aligned_cols=74 Identities=12% Similarity=0.095 Sum_probs=45.9
Q ss_pred CcEEEEEecCCCCCCchh-hHHHhhhCCCCCceEEEcCCccccCCCCCCCchhh--hHHHHHHhhhhccCCeEEccCCCc
Q 040421 98 PYTFGLIGDLGQTYYSNR-TLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRW--DTWGRFIERNAAYQPWIWTVGNHE 174 (407)
Q Consensus 98 ~~~f~~~gD~~~~~~~~~-~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~--~~~~~~~~~~~~~~P~~~~~GNHD 174 (407)
.+|++++||+|....... .++.+.+. ++|+|+++||++..... ......| .+..+.++.+. .|+++++||||
T Consensus 25 mmki~~iSD~H~~~~~l~~~l~~~~~~--~~d~vi~~GDl~~~g~~-~~~~~~~~~~~~~~~l~~~~--~~v~~V~GNHD 99 (208)
T 1su1_A 25 MMKLMFASDIHGSLPATERVLELFAQS--GAQWLVILGDVLNHGPR-NALPEGYAPAKVVERLNEVA--HKVIAVRGNCD 99 (208)
T ss_dssp CCEEEEECCCTTBHHHHHHHHHHHHHH--TCSEEEECSCCSCCCTT-SCCCTTBCHHHHHHHHHTTG--GGEEECCCTTC
T ss_pred cEEEEEEEcCCCCHHHHHHHHHHHHhc--CCCEEEECCCccccCcc-cccccccCHHHHHHHHHhcC--CceEEEECCCc
Confidence 489999999997532222 22333333 78999999999964221 1111121 34455555442 58999999999
Q ss_pred cc
Q 040421 175 ID 176 (407)
Q Consensus 175 ~~ 176 (407)
..
T Consensus 100 ~~ 101 (208)
T 1su1_A 100 SE 101 (208)
T ss_dssp CH
T ss_pred hH
Confidence 74
|
| >1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A | Back alignment and structure |
|---|
Probab=98.64 E-value=3.5e-08 Score=99.00 Aligned_cols=188 Identities=13% Similarity=0.091 Sum_probs=91.9
Q ss_pred CCcEEEEEecCCCCCCc-------hhh----HHHhhhCC--CCC-ceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhc
Q 040421 97 VPYTFGLIGDLGQTYYS-------NRT----LTHYELNP--IKG-QTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAA 162 (407)
Q Consensus 97 ~~~~f~~~gD~~~~~~~-------~~~----l~~~~~~~--~~~-d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~ 162 (407)
..++|+.++|+|..... ... ++++.+.. .++ +++|.+||++..... ......+...+.+..+.
T Consensus 7 ~~l~Il~~~D~H~~~~~~~~~~~G~~~~~~~v~~~r~~~~~~~~~~lvl~~GD~~~g~~~--~~~~~~~~~~~~ln~lg- 83 (516)
T 1hp1_A 7 YKITVLHTNDHHGHFWRNEYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPE--SDLQDAEPDFRGMNLVG- 83 (516)
T ss_dssp EEEEEEEECCCTTCCSCCTTSCCCHHHHHHHHHHHHHHHHHHTCEEEEEECSCCSSSCHH--HHTTTTHHHHHHHHHHT-
T ss_pred eEEEEEEecccccCccCCCCCCcCHHHHHHHHHHHHHhhhccCCCEEEEeCCccCCCcch--hhhcCCcHHHHHHhccC-
Confidence 57999999999975321 112 23332210 135 799999999843210 00011223344444432
Q ss_pred cCCeEEccCCCccccCCCCCCcccccccccccccCCCC-------CC-CCCCeEEEEecCc--EEEEEEecccc--CC-C
Q 040421 163 YQPWIWTVGNHEIDFAPQLGEAIPFKPFANRFHLPYRA-------PY-STAPFWYSIRRAS--AHIIVMSCYSA--FG-K 229 (407)
Q Consensus 163 ~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~-------~~-~~~~~~ysf~~g~--v~fi~Lds~~~--~~-~ 229 (407)
+-++++||||+.+.. ..+........+|.-. .+ .....|..++.++ +.|+.+.+... +. .
T Consensus 84 --~d~~~~GNHEfd~g~-----~~l~~~~~~~~~~~l~aNv~~~~~g~~~~~~~~i~~~~G~kIgiiG~~~~~~~~~~~p 156 (516)
T 1hp1_A 84 --YDAMAIGNHEFDNPL-----TVLRQQEKWAKFPLLSANIYQKSTGERLFKPWALFKRQDLKIAVIGLTTDDTAKIGNP 156 (516)
T ss_dssp --CCEEECCGGGGSSCH-----HHHHHHHHHCSSCEECSSEEETTTTEESSBSEEEEEETTEEEEEEEEECTTTTTSSSC
T ss_pred --CCEEeeccccccCCH-----HHHHHHHhhCCCCEEEeEEEECCCCCcccCCeEEEEECCEEEEEEEecccCcccccCc
Confidence 447899999995321 0001111111111100 00 0112345567776 56666665321 11 0
Q ss_pred ----------ChHH-HHHHHHhccccCCCCCCeEEEEeeccccccCCCCCCCChhHHHHHHHHHHhCCCcEEEecccccc
Q 040421 230 ----------YTPQ-YKWLEKEFPKVNRSETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAY 298 (407)
Q Consensus 230 ----------~~~Q-~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y 298 (407)
..+. .+|+++ |++. .+...+|+++|.|....... ..+......+...+...+||++|+||.|..
T Consensus 157 ~~~~~~~~~d~~~~~~~~v~~-l~~~--~~~d~iI~l~H~g~~~~~~~--~~~~~~~~~la~~~~~~~iDlilgGHtH~~ 231 (516)
T 1hp1_A 157 EYFTDIEFRKPADEAKLVIQE-LQQT--EKPDIIIAATHMGHYDNGEH--GSNAPGDVEMARALPAGSLAMIVGGHSQDP 231 (516)
T ss_dssp CSCTTEEECCHHHHHHHHHHH-HHHH--TCCSEEEEEEESCCCGGGCC--TTSCCCHHHHHHHSCTTSSSEEECCSSCCB
T ss_pred CccCCcEEeCHHHHHHHHHHH-HHhc--CCCCEEEEEecCCccCCCcc--cccCchHHHHHHhCCCCceeEEECCCCCcc
Confidence 0122 334433 4421 24568999999998543221 111011123333444456999999999975
Q ss_pred c
Q 040421 299 E 299 (407)
Q Consensus 299 ~ 299 (407)
.
T Consensus 232 ~ 232 (516)
T 1hp1_A 232 V 232 (516)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >2z1a_A 5'-nucleotidase; metal-binding, nucleotide-binding, hydrolase, structural genomics, NPPSFA; HET: THM; 1.75A {Thermus thermophilus} SCOP: d.114.1.1 d.159.1.2 | Back alignment and structure |
|---|
Probab=98.63 E-value=6.1e-08 Score=97.98 Aligned_cols=175 Identities=15% Similarity=0.090 Sum_probs=89.6
Q ss_pred CCCcEEEEEecCCCCCC--------------chhh----HHHhhhCCCCCc-eEEEcCCccccCCCCCCCchhhhHHHHH
Q 040421 96 DVPYTFGLIGDLGQTYY--------------SNRT----LTHYELNPIKGQ-TVLFVGDLSYADDYPFHDNNRWDTWGRF 156 (407)
Q Consensus 96 ~~~~~f~~~gD~~~~~~--------------~~~~----l~~~~~~~~~~d-~vl~~GD~~y~~~~~~~~~~~~~~~~~~ 156 (407)
...++|+.++|+|.... .... ++++.+. .|| ++|.+||++...... .........+.
T Consensus 27 ~~~l~Il~~~D~H~~~~~~~~~~~~~~~~~gg~~~~~~~v~~~r~~--~~~~l~l~~GD~~~gs~~~--~~~~~~~~~~~ 102 (552)
T 2z1a_A 27 GFTLTLVHTNDTHAHLEPVELTLSGEKTPVGGVARRVALFDRVWAR--AKNPLFLDAGDVFQGTLYF--NQYRGLADRYF 102 (552)
T ss_dssp -CEEEEEEECCCTTCCSCEEEECSSSEEEECCHHHHHHHHHHHHHH--SSSEEEEECSCCSSSSHHH--HHHTTHHHHHH
T ss_pred CeeEEEEEEcccccCcccccccCcccccccCCHHHHHHHHHHHHhh--CCCEEEEeCCCCCCCcHHH--HHhCCcHHHHH
Confidence 35799999999996421 1122 2333333 566 889999999532100 00011223333
Q ss_pred HhhhhccCCeEEccCCCccccCCCCCCcccccccccccccCCCCC-----C-----CCCCeEEEEecCc--EEEEEEecc
Q 040421 157 IERNAAYQPWIWTVGNHEIDFAPQLGEAIPFKPFANRFHLPYRAP-----Y-----STAPFWYSIRRAS--AHIIVMSCY 224 (407)
Q Consensus 157 ~~~~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~-----~-----~~~~~~ysf~~g~--v~fi~Lds~ 224 (407)
+..+ -+-++++||||+.+.. ..+..+.+....|.-.. . .....|..++.++ +.|+.+.+.
T Consensus 103 ln~l---g~d~~~lGNHEfd~g~-----~~l~~~l~~~~~~~L~aNv~~~~~~~~~~~~~~~~i~~~~G~kIgiiG~~~~ 174 (552)
T 2z1a_A 103 MHRL---RYRAMALGNHEFDLGP-----GPLADFLKGARFKVVSANVDASREPRLKGLFAPYAVVVVGGERVGIIGLTTP 174 (552)
T ss_dssp HHHT---TCCEEECCGGGGTTCH-----HHHHHHHTTCCSEEECTTEECTTCGGGTTSCBSEEEEEETTEEEEEEEEECT
T ss_pred HHhc---CCCccccccccccCCH-----HHHHHHHhhCCCCEEEEEEecCCCcccccccCCeEEEEECCEEEEEEEeccc
Confidence 3332 2447899999995321 00111111111111000 0 0123455677776 566666653
Q ss_pred cc--CC---------CChHHHHHHHHhccccCCCCCCeEEEEeeccccccCCCCCCCChhHHHHHHHHHHh-CCCcEEEe
Q 040421 225 SA--FG---------KYTPQYKWLEKEFPKVNRSETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVE-YKVDVVFA 292 (407)
Q Consensus 225 ~~--~~---------~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~-~~vdlvl~ 292 (407)
.. +. ...++.+.+.+.|++ .+...+|+++|.|.... ..+.++ .+||++|+
T Consensus 175 ~~~~~~~~~~~~~~~d~~~~~~~~v~~l~~---~~~d~iIvL~H~g~~~d---------------~~la~~~~gvDlIlg 236 (552)
T 2z1a_A 175 DTREISNPGPTVAFLDPYESAQKAVYELLA---KGVNKIVVLSHLGYGED---------------LKLARRLVGVQVIVG 236 (552)
T ss_dssp THHHHSCCCTTCEECCHHHHHHHHHHHHHH---TTCCCEEEEEESCHHHH---------------HHHHTTCSSCCEEEE
T ss_pred chhhccCCCCCcEECCHHHHHHHHHHHHHh---cCCCEEEEEeCCCcchH---------------HHHHHhCCCccEEEe
Confidence 21 00 111334444444543 34568999999985321 122333 58999999
Q ss_pred cccccccc
Q 040421 293 AHVHAYER 300 (407)
Q Consensus 293 GH~H~y~r 300 (407)
||.|....
T Consensus 237 GHtH~~~~ 244 (552)
T 2z1a_A 237 GHSHTLLG 244 (552)
T ss_dssp CSSCCCBS
T ss_pred CCcCcccc
Confidence 99998654
|
| >3qfk_A Uncharacterized protein; structural genomics, center for structural genomics of infec diseases, csgid, phosphoesterase, hydrolase; HET: MSE AKG; 2.05A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=98.49 E-value=1.2e-06 Score=88.07 Aligned_cols=192 Identities=14% Similarity=0.140 Sum_probs=88.4
Q ss_pred CCCcEEEEEecCCCCCCc-------------hhh----HHHhhhCCCCCc-eEEEcCCccccCCCCCCC---chhhhHHH
Q 040421 96 DVPYTFGLIGDLGQTYYS-------------NRT----LTHYELNPIKGQ-TVLFVGDLSYADDYPFHD---NNRWDTWG 154 (407)
Q Consensus 96 ~~~~~f~~~gD~~~~~~~-------------~~~----l~~~~~~~~~~d-~vl~~GD~~y~~~~~~~~---~~~~~~~~ 154 (407)
...++|+.++|+|..... ... ++++.+. .++ ++|.+||++......... ........
T Consensus 17 ~~~l~Il~tnD~Hg~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~--~~~~l~l~~GD~~~gs~~~~~~~~~~~~~~~~~ 94 (527)
T 3qfk_A 17 GSNIAFYVVSDVHGYIFPTDFTSRNQYQPMGLLLANHVIEQDRRQ--YDQSFKIDNGDFLQGSPFCNYLIAHSGSSQPLV 94 (527)
T ss_dssp -CEEEEEEECCCTTCCSSCCSSSTTCCCSCSHHHHHHHHHHHHTT--SSEEEEEECSCCSSSSHHHHHHHHTTCSSHHHH
T ss_pred CCcEEEEEEeccCCCccCcccccCCCcCCCcHHHHHHHHHHHHhc--CCCEEEEECCCcCCCcHHHHHHhhcccCcchHH
Confidence 368999999999965310 112 3333333 455 778899999532110000 00012233
Q ss_pred HHHhhhhccCCeEEccCCCccccCCCCCCcccccccccccccCCCCC-------CCCCCeEEEEecCc--EEEEEEeccc
Q 040421 155 RFIERNAAYQPWIWTVGNHEIDFAPQLGEAIPFKPFANRFHLPYRAP-------YSTAPFWYSIRRAS--AHIIVMSCYS 225 (407)
Q Consensus 155 ~~~~~~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~-------~~~~~~~ysf~~g~--v~fi~Lds~~ 225 (407)
+.+..+ -+-++++||||+.+... .+..+.+...+|.-.. ......|.-++.++ +-||.+.+..
T Consensus 95 ~~ln~l---g~D~~t~GNHefd~G~~-----~l~~~~~~~~~p~l~aNv~~~g~p~~~~py~i~e~~G~kIgviG~~~~~ 166 (527)
T 3qfk_A 95 DFYNRM---AFDFGTLGNHEFNYGLP-----YLKDTLRRLNYPVLCANIYENDSTLTDNGVKYFQVGDQTVGVIGLTTQF 166 (527)
T ss_dssp HHHHHT---CCCEECCCGGGGTTCHH-----HHHHHHHHCSSCBCCSSEEETTEESSSCSEEEEEETTEEEEEEEEECTT
T ss_pred HHHHhc---CCcEEeccccccccCHH-----HHHHHHHhCCCCEEEeEeeeCCCCccCCCEEEEEECCEEEEEEEeccCC
Confidence 333332 23467899999853210 0011111111111100 00112355667777 4566665532
Q ss_pred c--CCC--------ChHHHHHHHHhccccCCCCCCeEEEEeeccccccCCCCC-C---CChhHHHHHHHHHHhCCCcEEE
Q 040421 226 A--FGK--------YTPQYKWLEKEFPKVNRSETPWLIVLMHCPLYNSYVHHY-M---EGEPMRVLYEPWFVEYKVDVVF 291 (407)
Q Consensus 226 ~--~~~--------~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~-~---~~~~~~~~l~~l~~~~~vdlvl 291 (407)
. +.. .....+.+++.+++.. .++..+|+++|.+.-....... . .++.....+..-+ ..+||++|
T Consensus 167 ~~~~~~~~~~~g~~~~d~~~~~~~~v~~l~-~~~D~iIvl~H~G~~~d~~~~~~~~~~~~e~~~~~la~~~-~~giDlIl 244 (527)
T 3qfk_A 167 IPHWEQPEHIQSLTFHSAFEILQQYLPEMK-RHADIIVVCYHGGFEKDLESGTPTEVLTGENEGYAMLEAF-SKDIDIFI 244 (527)
T ss_dssp GGGTSCHHHHTTEEECCHHHHHHHHHHHHH-HHCSEEEEEEECCCSBCTTTCCBSSCCSSSCCHHHHHHHH-GGGCSEEE
T ss_pred cccccCccccCCcEEcCHHHHHHHHHHHHH-hCCCEEEEEeCcCcccccccCccccccccchHHHHHHHhc-CCCCcEEE
Confidence 1 110 1112333333333322 3456899999987643211000 0 1111111222222 24899999
Q ss_pred eccccccc
Q 040421 292 AAHVHAYE 299 (407)
Q Consensus 292 ~GH~H~y~ 299 (407)
+||.|...
T Consensus 245 gGHtH~~~ 252 (527)
T 3qfk_A 245 TGHQHRQI 252 (527)
T ss_dssp CCSSCCEE
T ss_pred ECCCCccc
Confidence 99999854
|
| >4h2g_A 5'-nucleotidase; dimer, hydrolase, phosphatase, extracellular; HET: ADN; 1.55A {Homo sapiens} PDB: 4h2f_A* 4h1y_P* 4h2i_A* 4h1s_A* 4h2b_A* | Back alignment and structure |
|---|
Probab=98.43 E-value=6.9e-07 Score=90.09 Aligned_cols=179 Identities=15% Similarity=0.106 Sum_probs=87.3
Q ss_pred CCCcEEEEEecCCCCCCc-----------------hhh----HHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHH
Q 040421 96 DVPYTFGLIGDLGQTYYS-----------------NRT----LTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWG 154 (407)
Q Consensus 96 ~~~~~f~~~gD~~~~~~~-----------------~~~----l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~ 154 (407)
...++|+.++|+|..... ... ++++.+. ...+++|.+||++...... .........
T Consensus 23 ~~~l~Il~~nD~Hg~~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~-~~~~l~l~~GD~~~g~~~~--~~~~g~~~~ 99 (546)
T 4h2g_A 23 PWELTILHTNDVHSRLEQTSEDSSKCVDASRCMGGVARLFTKVQQIRRA-EPNVLLLDAGDQYQGTIWF--TVYKGAEVA 99 (546)
T ss_dssp CEEEEEEEECCCTTCCSCBCTTSSBCSSGGGCBCCHHHHHHHHHHHHHH-CSSEEEEECSCCSSSSHHH--HHHTTHHHH
T ss_pred ceEEEEEEecccccCCcccccccccccccccccCCHHHHHHHHHHHHhh-CCCEEEEECCccCCCchhh--hhhCChHHH
Confidence 357999999999964211 122 2333333 1336999999999542110 001112233
Q ss_pred HHHhhhhccCCeEEccCCCccccCCCCCCccccc-ccccccccCCCCCC----C--------CCCeEEEEecCcE--EEE
Q 040421 155 RFIERNAAYQPWIWTVGNHEIDFAPQLGEAIPFK-PFANRFHLPYRAPY----S--------TAPFWYSIRRASA--HII 219 (407)
Q Consensus 155 ~~~~~~~~~~P~~~~~GNHD~~~~~~~~~~~~~~-~~~~~f~~P~~~~~----~--------~~~~~ysf~~g~v--~fi 219 (407)
+.+..+. +-++++||||+.+... .+. .+.+....|.-... . ....|.-++.+++ -||
T Consensus 100 ~~ln~lg---~d~~~~GNHEfd~g~~-----~l~~~~~~~~~~~~l~aNv~~~~~~~p~~~~~~~~~~i~~~~G~kIgii 171 (546)
T 4h2g_A 100 HFMNALR---YDAMALGNHEFDNGVE-----GLIEPLLKEAKFPILSANIKAKGPLASQISGLYLPYKVLPVGDEVVGIV 171 (546)
T ss_dssp HHHHHHT---CSEEECCGGGGTTHHH-----HHHTTTTTTCSSCEECSSEEECHHHHHHHBTTBBSEEEEEETTEEEEEE
T ss_pred HHHHhcC---CcEEeccCcccccCHH-----HHHHHHHhhcCCCEEEEEeecCCCCCccccccCCCeEEEEECCEEEEEE
Confidence 4444332 3367899999853210 001 11111111111000 0 1134556777775 456
Q ss_pred EEecccc--CC-C-----ChHHHHHHHHhccccCCCCCCeEEEEeeccccccCCCCCCCChhHHHHHHHHHHhCCCcEEE
Q 040421 220 VMSCYSA--FG-K-----YTPQYKWLEKEFPKVNRSETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVF 291 (407)
Q Consensus 220 ~Lds~~~--~~-~-----~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl 291 (407)
.+.+... +. . .....+.+++.+++....++..+|+++|.+.... ..+...+ .+||++|
T Consensus 172 G~~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~l~~~g~D~iI~l~H~g~~~d------------~~la~~~--~giDlIl 237 (546)
T 4h2g_A 172 GYTSKETPFLSNPGTNLVFEDEITALQPEVDKLKTLNVNKIIALGHSGFEMD------------KLIAQKV--RGVDVVV 237 (546)
T ss_dssp EEECTTHHHHSCCCSSEEECCHHHHHHHHHHHHHHTTCCCEEEEEESCHHHH------------HHHHHHS--TTCCEEE
T ss_pred EecccccccccCCCCCcEEccHHHHHHHHHHHHHhcCCCEEEEEeccCccch------------HHHHHhC--CCCcEEE
Confidence 6654210 00 0 0122333333333221134678999999875310 1222112 3799999
Q ss_pred eccccccc
Q 040421 292 AAHVHAYE 299 (407)
Q Consensus 292 ~GH~H~y~ 299 (407)
+||.|...
T Consensus 238 gGHtH~~~ 245 (546)
T 4h2g_A 238 GGHSNTFL 245 (546)
T ss_dssp CCSSCCCC
T ss_pred eCCcCccc
Confidence 99999854
|
| >3ztv_A NAD nucleotidase, NADN; hydrolase, NAD pyrophosphatase, NMN nucleotidase, periplasmi enzyme, CD73; HET: ADN; 1.30A {Haemophilus influenzae} PDB: 3zu0_A* | Back alignment and structure |
|---|
Probab=98.39 E-value=1.2e-06 Score=89.01 Aligned_cols=177 Identities=15% Similarity=0.096 Sum_probs=86.6
Q ss_pred CCCcEEEEEecCCCCCCc------------------hhh----HHHhhhCCCCC-ceEEEcCCccccCCCCCCCchhhhH
Q 040421 96 DVPYTFGLIGDLGQTYYS------------------NRT----LTHYELNPIKG-QTVLFVGDLSYADDYPFHDNNRWDT 152 (407)
Q Consensus 96 ~~~~~f~~~gD~~~~~~~------------------~~~----l~~~~~~~~~~-d~vl~~GD~~y~~~~~~~~~~~~~~ 152 (407)
...++|+.++|+|..... ... ++++.+. .+ .++|.+||++....... ......
T Consensus 10 ~~~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~~~~gG~arla~~i~~~r~~--~~~~l~l~~GD~~~gs~~~~--~~~g~~ 85 (579)
T 3ztv_A 10 AVELSILHINDHHSYLEPHETRINLNGQQTKVDIGGFSAVNAKLNKLRKK--YKNPLVLHAGDAITGTLYFT--LFGGSA 85 (579)
T ss_dssp CEEEEEEEECCCTTCCSCEEEEEEETTEEEEEEECCHHHHHHHHHHHHHH--SSSEEEEECSCCSCSSHHHH--TTTTHH
T ss_pred ceEEEEEEeCccccCccCCccccccCCcccccccCCHHHHHHHHHHHHhh--CCCEEEEeCCCCCCCceeee--ecCCHH
Confidence 356999999999965322 112 2333333 34 48999999996421100 011222
Q ss_pred HHHHHhhhhccCCeEEccCCCccccCCCCCCcccccccccccccCC---C-----CCC--CCCCeEEEEecCc--EEEEE
Q 040421 153 WGRFIERNAAYQPWIWTVGNHEIDFAPQLGEAIPFKPFANRFHLPY---R-----APY--STAPFWYSIRRAS--AHIIV 220 (407)
Q Consensus 153 ~~~~~~~~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~P~---~-----~~~--~~~~~~ysf~~g~--v~fi~ 220 (407)
..+.|..+ -+-++++||||+.+.. ..+..+.+...+|. | +.. ..-..|.-++.++ +-||.
T Consensus 86 ~~~~ln~l---g~D~~tlGNHEfd~G~-----~~l~~~~~~~~fp~l~aNv~~~~~~~~~~~~~py~i~~~~G~kIgviG 157 (579)
T 3ztv_A 86 DAAVMNAG---NFHYFTLGNHEFDAGN-----EGLLKLLEPLKIPVLSANVIPDKSSILYNKWKPYDIFTVDGEKIAIIG 157 (579)
T ss_dssp HHHHHHHH---TCSEEECCSGGGTTHH-----HHHHHHHTTCCSCEECSSEEECTTSTTTTSCBSEEEEEETTEEEEEEE
T ss_pred HHHHHHhc---CcCeeeccccccccCH-----HHHHHHHHhcCCCeeeeeEeccCCcccccccCCeEEEEECCEEEEEEE
Confidence 33444433 2345789999985321 00111111111111 0 000 0112355567777 56677
Q ss_pred Eec-cc-----cCCC---ChHHHHHHHHhccccCCCCCCeEEEEeeccccccCCCCCCCChhHHHHHHHHHHh-CCCcEE
Q 040421 221 MSC-YS-----AFGK---YTPQYKWLEKEFPKVNRSETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVE-YKVDVV 290 (407)
Q Consensus 221 Lds-~~-----~~~~---~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~-~~vdlv 290 (407)
+.+ .. .... .....+-+++.+++........+|+++|.+.-. ... +.++ -+||++
T Consensus 158 ~t~~~~~~~~~~p~~~~~f~d~~~~~~~~v~~lk~~g~d~iI~l~H~G~~~------------d~~---la~~~~giDlI 222 (579)
T 3ztv_A 158 LDTVNKTVNSSSPGKDVKFYDEIATAQIMANALKQQGINKIILLSHAGSEK------------NIE---IAQKVNDIDVI 222 (579)
T ss_dssp EECSHHHHHHSCCCTTEEECCHHHHHHHHHHHHHTTTCCCEEEEEETCHHH------------HHH---HHHHCSSCCEE
T ss_pred EEcCCccccccCCCCCceEcCHHHHHHHHHHHHHhCCCCEEEEEeccCchh------------hHH---HHHhCCCCCEE
Confidence 743 10 0000 112223333333332223466899999987421 012 2222 379999
Q ss_pred Eeccccccc
Q 040421 291 FAAHVHAYE 299 (407)
Q Consensus 291 l~GH~H~y~ 299 (407)
|+||.|...
T Consensus 223 lgGHtH~~~ 231 (579)
T 3ztv_A 223 VTGDSHYLY 231 (579)
T ss_dssp EECSSCCEE
T ss_pred EeCCCCccc
Confidence 999999865
|
| >3ive_A Nucleotidase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: CTN; 1.70A {Escherichia coli O6} PDB: 3ivd_A* | Back alignment and structure |
|---|
Probab=98.35 E-value=1.5e-06 Score=86.91 Aligned_cols=186 Identities=13% Similarity=0.061 Sum_probs=85.7
Q ss_pred CCcEEEEEecCCCCCCc---------------hhh----HHHhhhCCCCCceEEE-cCCccccCCCCCCCchhhhHHHHH
Q 040421 97 VPYTFGLIGDLGQTYYS---------------NRT----LTHYELNPIKGQTVLF-VGDLSYADDYPFHDNNRWDTWGRF 156 (407)
Q Consensus 97 ~~~~f~~~gD~~~~~~~---------------~~~----l~~~~~~~~~~d~vl~-~GD~~y~~~~~~~~~~~~~~~~~~ 156 (407)
..++|+.++|+|..... ... ++++.+. .++.+++ +||++...... .........+.
T Consensus 5 ~~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~gG~a~la~~i~~~r~~--~~~~llldaGD~~~g~~~~--~~~~g~~~~~~ 80 (509)
T 3ive_A 5 KDVTIIYTNDLHAHVEPYKVPWIADGKRDIGGWANITTLVKQEKAK--NKATWFFDAGDYFTGPYIS--SLTKGKAIIDI 80 (509)
T ss_dssp EEEEEEEECCCTTCCSCBCCTTSGGGTSCBCCHHHHHHHHHHHHHH--CSSEEEEECSCCSSSSHHH--HTTTTHHHHHH
T ss_pred eEEEEEEEccccCCccCcccccccCCCcCcCCHHHHHHHHHHHHhc--CCCeEEEECCCCCCCchhh--hhcCChHHHHH
Confidence 46899999999964211 122 2333333 5666555 99998532110 00111223333
Q ss_pred HhhhhccCCeEEccCCCccccCCCCCCcccccccccccccCCC---------CCCCCCCeEEEEecCc--EEEEEEeccc
Q 040421 157 IERNAAYQPWIWTVGNHEIDFAPQLGEAIPFKPFANRFHLPYR---------APYSTAPFWYSIRRAS--AHIIVMSCYS 225 (407)
Q Consensus 157 ~~~~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~---------~~~~~~~~~ysf~~g~--v~fi~Lds~~ 225 (407)
+.. --+-++++||||+.+... .+..+.+....|.- +.......|.-++.++ +-||.+-+..
T Consensus 81 ln~---lg~D~~tlGNHEfd~G~~-----~l~~~l~~~~~p~l~aNv~~~~~~~p~~~~py~i~e~~G~kIgiiG~t~~~ 152 (509)
T 3ive_A 81 MNT---MPFDAVTIGNHEFDHGWD-----NTLLQLSQAKFPIVQGNIFYQNSSKSFWDKPYTIIEKDGVKIGVIGLHGVF 152 (509)
T ss_dssp HTT---SCCSEECCCGGGGTTCHH-----HHHHHHTTCSSCBCCCSEEETTSCCBSSSCSEEEEEETTEEEEEEEEECHH
T ss_pred HHh---cCCcEEeecccccccCHH-----HHHHHHhhCCCCEEEEEEEECCCCCccCcCCeEEEEECCEEEEEEecccCc
Confidence 332 235577899999854210 00011111111110 0000023355667777 4566664311
Q ss_pred -----cC----C--CChHHHHHHHHhccccCCCCCCeEEEEeeccccccCCCCC----CCChhHHHHHHHHHHh-CCCcE
Q 040421 226 -----AF----G--KYTPQYKWLEKEFPKVNRSETPWLIVLMHCPLYNSYVHHY----MEGEPMRVLYEPWFVE-YKVDV 289 (407)
Q Consensus 226 -----~~----~--~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~----~~~~~~~~~l~~l~~~-~~vdl 289 (407)
.+ . ......+.+++.+++.. .++..+|+++|.+.-....... ..+.... ..+.++ .+||+
T Consensus 153 ~~~~~~~~~~~~g~~~~d~~~~~~~~v~~Lk-~~~D~iIvl~H~G~~~~~~~~~~~~~~~~~~~d---~~la~~~~giDl 228 (509)
T 3ive_A 153 AFNDTVSAATRVGIEARDEIKWLQRYIDELK-GKVDLTVALIHEGVPARQSSMGGTDVRRALDKD---IQTASQVKGLDI 228 (509)
T ss_dssp HHHHHSCGGGCTTEEECCHHHHHHHHHHHHT-TTCSEEEEEEECSSCCCCCCC---CCCCCCHHH---HHHHHHCSSCCE
T ss_pred ccccccccccCCCCEEcCHHHHHHHHHHHHH-hcCCEEEEEeccCcCCccccccccccccccchH---HHHHhcCCCCcE
Confidence 00 0 01122333333333322 2367899999988532111100 0011111 123333 37999
Q ss_pred EEecccccc
Q 040421 290 VFAAHVHAY 298 (407)
Q Consensus 290 vl~GH~H~y 298 (407)
+|+||.|..
T Consensus 229 IlgGHtH~~ 237 (509)
T 3ive_A 229 LITGHAHVG 237 (509)
T ss_dssp EEEESSCCC
T ss_pred EEeCCcCcc
Confidence 999999964
|
| >2wdc_A SOXB, sulfur oxidation protein SOXB; sulfur-sulfur hydrolysis, sulfur oxidation pathway, Cys S-thiosulfonate, hydrolase; 1.50A {Thermus thermophilus} PDB: 2wdd_A* 2wde_A 2wdf_A | Back alignment and structure |
|---|
Probab=98.28 E-value=3.1e-06 Score=85.45 Aligned_cols=144 Identities=13% Similarity=0.060 Sum_probs=71.4
Q ss_pred Cc-eEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccCCeEEccCCCccccCCCCCCcccccccccccccCCCCC----
Q 040421 127 GQ-TVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHEIDFAPQLGEAIPFKPFANRFHLPYRAP---- 201 (407)
Q Consensus 127 ~d-~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~---- 201 (407)
|| ++|.+||++..... ..........+++..+ ..+++ + ||||+.+.. ..+..+.+.+..|.-..
T Consensus 123 pd~Lll~~GD~~~gs~~--~~~~~g~~~~~~ln~l--g~d~~-~-GNHEfd~G~-----~~l~~~l~~~~~p~L~aNv~~ 191 (562)
T 2wdc_A 123 GKALVLDGGDTWTNSGL--SLLTRGEAVVRWQNLV--GVDHM-V-SHWEWTLGR-----ERVEELLGLFRGEFLSYNIVD 191 (562)
T ss_dssp CCEEEEECSCCSSSSHH--HHHHTTHHHHHHHHHH--TCCEE-C-CSGGGGGCH-----HHHHHHHHHCCSEECCSSCEE
T ss_pred CCEEEEeCCCCCCcchh--hhhhCCHHHHHHHHhh--CCcEE-e-cchhcccCH-----HHHHHHHHhCCCCEEEEEEEe
Confidence 78 89999999953210 0000112334445444 34654 7 999985321 00111111111111100
Q ss_pred ---C-CCCCeEEEEecCc--EEEEEEeccc-----------c--CCCChHHHHHHHHhccccCCCCCCeEEEEeeccccc
Q 040421 202 ---Y-STAPFWYSIRRAS--AHIIVMSCYS-----------A--FGKYTPQYKWLEKEFPKVNRSETPWLIVLMHCPLYN 262 (407)
Q Consensus 202 ---~-~~~~~~ysf~~g~--v~fi~Lds~~-----------~--~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~ 262 (407)
+ ..-..|.-++.++ +.+|.+.+.. . +....+..+-+.+.|++ .+...+|+++|.|...
T Consensus 192 ~~~~~~~~~py~i~e~~G~kIgiiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~---~~~d~iIvLsH~g~~~ 268 (562)
T 2wdc_A 192 DLFGDPLFPAYRIHRVGPYALAVVGASYPYVKVSHPESFTEGLSFALDERRLQEAVDKARA---EGANAVVLLSHNGMQL 268 (562)
T ss_dssp TTTCCBSSCSEEEEEETTEEEEEEEECCTTHHHHSCGGGGTTEECCCCHHHHHHHHHHHHH---TTCSEEEEEECSCHHH
T ss_pred cCCCCcccCCeEEEEECCeEEEEEeeccCcccccccccccCCcEEeCHHHHHHHHHHHHHH---CCCCEEEEEeCCCCcc
Confidence 0 0112345566776 5666665421 0 11122333333333443 3566899999998532
Q ss_pred cCCCCCCCChhHHHHHHHHHHh-CCCcEEEeccccccc
Q 040421 263 SYVHHYMEGEPMRVLYEPWFVE-YKVDVVFAAHVHAYE 299 (407)
Q Consensus 263 ~~~~~~~~~~~~~~~l~~l~~~-~~vdlvl~GH~H~y~ 299 (407)
. ..+.++ .+||++|+||.|...
T Consensus 269 d---------------~~la~~~~giDlIlgGHtH~~~ 291 (562)
T 2wdc_A 269 D---------------AALAERIRGIDLILSGHTHDLT 291 (562)
T ss_dssp H---------------HHHHTTSSSCCEEEECSSCCCC
T ss_pred h---------------HHHHhcCCCCcEEEeCCCCCCC
Confidence 0 123334 489999999999754
|
| >1t71_A Phosphatase, conserved HYPO; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI; 2.10A {Mycoplasma pneumoniae M129} SCOP: d.159.1.9 | Back alignment and structure |
|---|
Probab=98.24 E-value=2.3e-05 Score=71.37 Aligned_cols=177 Identities=14% Similarity=0.061 Sum_probs=89.5
Q ss_pred CCcEEEEEecCCCCCCc---hhhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccCCeEEccCCC
Q 040421 97 VPYTFGLIGDLGQTYYS---NRTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNH 173 (407)
Q Consensus 97 ~~~~f~~~gD~~~~~~~---~~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNH 173 (407)
..+||+++||.+..... ...+.++.++ .++|+++..||.+..... ......+.+..+ ..- ..++|||
T Consensus 3 ~~m~ilf~GDv~G~~G~~~l~~~l~~lr~~-~~~d~vi~Ngen~~gG~g------~~~~~~~~ln~~--G~D-a~TlGNH 72 (281)
T 1t71_A 3 NSIKFIFLGDVYGKAGRNIIKNNLAQLKSK-YQADLVIVNAENTTHGKG------LSLKHYEFLKEA--GVN-YITMGNH 72 (281)
T ss_dssp CCCEEEEECEEBHHHHHHHHHTTHHHHHHH-HTCSEEEEECTBTTTTSS------CCHHHHHHHHHH--TCC-EEECCTT
T ss_pred ceEEEEEECCcCChHHHHHHHHHHHHHHHh-cCCCEEEEcCCCCCCCCC------cCHHHHHHHHhc--CCC-EEEEccC
Confidence 36899999999844211 1223444433 157999999999864311 112223333332 122 4588999
Q ss_pred ccccCCCCCCccccccc---ccccccCCCCCCC-CCCeEEEEecCcE--EEEEEeccccCC--CChHHHHHHHHhccccC
Q 040421 174 EIDFAPQLGEAIPFKPF---ANRFHLPYRAPYS-TAPFWYSIRRASA--HIIVMSCYSAFG--KYTPQYKWLEKEFPKVN 245 (407)
Q Consensus 174 D~~~~~~~~~~~~~~~~---~~~f~~P~~~~~~-~~~~~ysf~~g~v--~fi~Lds~~~~~--~~~~Q~~WL~~~L~~~~ 245 (407)
|+.+.+ +..+|-.- ...-++|...... .+..|.-++.+++ -+|.|-+...+. ..+.-.+.+++.++
T Consensus 73 efD~g~---~~~~~l~~~~~v~~aN~p~~~~~~~~g~g~~I~e~~G~kIgVIgl~g~~~f~~~~~~~pf~~a~~~v~--- 146 (281)
T 1t71_A 73 TWFQKL---DLAVVINKKDLVRPLNLDTSFAFHNLGQGSLVFEFNKAKIRITNLLGTSVPLPFKTTNPFKVLKELIL--- 146 (281)
T ss_dssp TTCCGG---GHHHHTTCTTEECBSCBCTTSTTTTSSBSEEEEECSSCEEEEEEEECTTSCCSSCBCCHHHHHHHHHT---
T ss_pred cccCCc---cHHHHhhhcCEEeeccCCcccccccCCCCeEEEEECCEEEEEEEeeccccccCccccCHHHHHHHHHh---
Confidence 996431 11111000 0001122211000 2235666777775 455554432122 12223445555555
Q ss_pred CCCCCeEEEEeeccccccCCCCCCCChhHHHHHHHHHHhCCCcEEEeccccccccc
Q 040421 246 RSETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAYERS 301 (407)
Q Consensus 246 ~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~ 301 (407)
+.+.+.+||.+|.-. ....+.+.. .-.-+||+|+.||+|.....
T Consensus 147 ~~~~diIIv~~H~g~-----------t~Ek~~la~-~~dg~VD~VvGgHTHv~t~d 190 (281)
T 1t71_A 147 KRDCDLHIVDFHAET-----------TSEKNAFCM-AFDGYVTTIFGTHTHVPSAD 190 (281)
T ss_dssp TCCCSEEEEEEECSC-----------HHHHHHHHH-HHTTTSSEEEEESSSSCCTT
T ss_pred hcCCCEEEEEeCCCc-----------hHHHHHHHH-hCCCCeEEEEeCCCCcCCCc
Confidence 256789999999421 111122222 12346999999999986543
|
| >3c9f_A 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, protein STR initiative, PSI-2, NEW YORK SGX research center for structu genomics, nysgxrc; 1.90A {Candida albicans} SCOP: d.114.1.1 d.159.1.2 | Back alignment and structure |
|---|
Probab=97.98 E-value=5e-05 Score=76.36 Aligned_cols=186 Identities=12% Similarity=0.107 Sum_probs=88.7
Q ss_pred CCCcEEEEEecCCCCCCc-------------hhhH----HHhhhCCCCCc-eEEEcCCccccCCCCCCCchhhhHHHHHH
Q 040421 96 DVPYTFGLIGDLGQTYYS-------------NRTL----THYELNPIKGQ-TVLFVGDLSYADDYPFHDNNRWDTWGRFI 157 (407)
Q Consensus 96 ~~~~~f~~~gD~~~~~~~-------------~~~l----~~~~~~~~~~d-~vl~~GD~~y~~~~~~~~~~~~~~~~~~~ 157 (407)
...++|+.++|+|..... ...+ ++..+. .+++ ++|.+||++.................+.|
T Consensus 13 ~~~l~ILhtnD~Hg~~~~~~~~~~~~~~~Gg~a~l~~~i~~~~~~-~~~~~LlldaGD~~~Gs~~~~~~~~~g~~~~~~l 91 (557)
T 3c9f_A 13 WNDINFVHTTDTHGWYSGHINQPLYHANWGDFISFTTHMRRIAHS-RNQDLLLIDSGDRHDGNGLSDITSPNGLKSTPIF 91 (557)
T ss_dssp CCSEEEEEECCCTTCTTCCSSCGGGCCCHHHHHHHHHHHHHHHHH-TTCEEEEEECSCCCSSCHHHHSSSSTTTTTHHHH
T ss_pred ceEEEEEEEcccccCccCcccccccccccchHHHHHHHHHHHHHh-cCCCEEEEecCCCCCCccchhhcccCCHHHHHHH
Confidence 468999999999975321 1112 222212 2677 57999999954221100000122223344
Q ss_pred hhhhccCCeEEccCCCccccCCCCCCcccccccccccccCCCCC--------CC---CCCeEEEEec--Cc--EEEEEEe
Q 040421 158 ERNAAYQPWIWTVGNHEIDFAPQLGEAIPFKPFANRFHLPYRAP--------YS---TAPFWYSIRR--AS--AHIIVMS 222 (407)
Q Consensus 158 ~~~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~--------~~---~~~~~ysf~~--g~--v~fi~Ld 222 (407)
..+. .=++++||||+.+... ....+....+....|.-.+ +. ....|.-++. ++ +-||.+.
T Consensus 92 n~lg---~Da~tlGNHEfD~G~~--~l~~~~~~l~~a~fp~L~ANv~~~~~~g~~~~~~~py~I~e~~~~G~kIgiiGlt 166 (557)
T 3c9f_A 92 IKQD---YDLLTIGNHELYLWEN--SKQEYETVVNHFQDKYVCSNVDIRLDNGLFVPLGLKYKYFTTPIRGIRVMAFGFL 166 (557)
T ss_dssp TTSC---CSEECCCGGGSSSHHH--HHHHHHHHHHHTTTTBBCSSEEEECTTSCEEESSBSCEEEECTTTCCEEEEEECC
T ss_pred HhcC---CCEEeecchhcccchH--HHHHHHHHHHhCCCCEEEeecccccccCCccccCCCeEEEEEccCCEEEEEEEee
Confidence 3322 3366899999963210 0000111111111121110 00 1123556676 66 4555555
Q ss_pred ccccCC-----C-ChHH--H-HHHHHhccccCCCCCCeEEEEeeccccccCCCCCCCChhHHHHHHHHHHh--CCCcE-E
Q 040421 223 CYSAFG-----K-YTPQ--Y-KWLEKEFPKVNRSETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVE--YKVDV-V 290 (407)
Q Consensus 223 s~~~~~-----~-~~~Q--~-~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~--~~vdl-v 290 (407)
+...-. . ...+ . +|+++.++ .++..+||++|.+.-... .+ . ......+.+ .++|+ +
T Consensus 167 ~~~~~~~~~~~~~d~~e~i~~~~v~~l~~----~~~D~IIvL~H~G~~~~~------d~-~-~~~~~~lA~~~~giDilI 234 (557)
T 3c9f_A 167 FDFKRFNSGTRVTPMAETIHEPWFQEALK----HEVDLIIIVGHTPISHNW------GE-F-YQVHQYLRQFFPDTIIQY 234 (557)
T ss_dssp CCCCCCCTTEEECCHHHHTTSHHHHHHTT----SCCSEEEEECSSCCCTTT------CH-H-HHHHHHHHHHCTTSEEEE
T ss_pred cCCCCCCCCcEECCHHHHHHHHHHHHHHh----cCCCEEEEecccCccccC------cc-c-cHHHHHHHHhCCCCCEEE
Confidence 421100 0 1112 2 47766553 356789999999862100 11 1 122222222 58995 9
Q ss_pred Eeccccccc
Q 040421 291 FAAHVHAYE 299 (407)
Q Consensus 291 l~GH~H~y~ 299 (407)
|+||.|...
T Consensus 235 lgGHtH~~~ 243 (557)
T 3c9f_A 235 FGGHSHIRD 243 (557)
T ss_dssp EECSSCCEE
T ss_pred ECCCCCCCC
Confidence 999999873
|
| >2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus} SCOP: d.159.1.10 PDB: 2cv9_A | Back alignment and structure |
|---|
Probab=97.96 E-value=0.00014 Score=64.96 Aligned_cols=170 Identities=12% Similarity=0.155 Sum_probs=83.3
Q ss_pred cEEEEEecCCCCCCc---hhhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccCCeEEccCCCcc
Q 040421 99 YTFGLIGDLGQTYYS---NRTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHEI 175 (407)
Q Consensus 99 ~~f~~~gD~~~~~~~---~~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~ 175 (407)
+|++++||.=..... ...+.++.++ . |++|..|..+..... -. ....+.+..+ ..-. .++||||+
T Consensus 1 m~ilfiGDi~g~~G~~~v~~~l~~lr~~--~-d~vi~ngen~~~G~g--~~----~~~~~~l~~~--G~D~-~T~GNHef 68 (252)
T 2z06_A 1 MRVLFIGDVMAEPGLRAVGLHLPDIRDR--Y-DLVIANGENAARGKG--LD----RRSYRLLREA--GVDL-VSLGNHAW 68 (252)
T ss_dssp CEEEEECCBCHHHHHHHHHHHHHHHGGG--C-SEEEEECTTTTTTSS--CC----HHHHHHHHHH--TCCE-EECCTTTT
T ss_pred CEEEEEEecCCcccHHHHHHHHHHHHhh--C-CEEEEeCCCccCCCC--cC----HHHHHHHHhC--CCCE-EEeccEee
Confidence 589999997432211 1234444444 4 888887766643211 11 2223333332 2333 48899999
Q ss_pred ccCCCCCCcccccccccccccCCCCC-CCCCCeEEEEecCcEEEEEEe--ccccCCCChHHHHHHHHhccccCCCCCCeE
Q 040421 176 DFAPQLGEAIPFKPFANRFHLPYRAP-YSTAPFWYSIRRASAHIIVMS--CYSAFGKYTPQYKWLEKEFPKVNRSETPWL 252 (407)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~f~~P~~~~-~~~~~~~ysf~~g~v~fi~Ld--s~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~ 252 (407)
... +..+|-.-.. .-.|.|-+ +.....|.-++.++.++-+++ +.........-.+-+++.+++.. .+.+
T Consensus 69 D~~----~l~~~l~~~~-~vrpaN~~~~~pg~~~~i~~~~G~kIgVi~l~g~~~~~~~~~pf~~~~~~v~~lk---~d~I 140 (252)
T 2z06_A 69 DHK----EVYALLESEP-VVRPLNYPPGTPGKGFWRLEVGGESLLFVQVMGRIFMDPLDDPFRALDRLLEEEK---ADYV 140 (252)
T ss_dssp SCT----THHHHHHHSS-EECCTTSCSSCSSCSEEEEEETTEEEEEEEEECCTTSCCCCCHHHHHHHHHHHCC---CSEE
T ss_pred ECc----hHHHHhccCC-ceEeecCCCCCCCCCeEEEEECCEEEEEEEcccccCccccCCHHHHHHHHHHHhC---CCEE
Confidence 632 1111110001 11233221 111345667888876655554 32211122222333444444431 6689
Q ss_pred EEEeeccccccCCCCCCCChhHHHHHHHHHHhCCCcEEEecccccccc
Q 040421 253 IVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAYER 300 (407)
Q Consensus 253 iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r 300 (407)
||.+|.-. ....+.+. .+-.-+||+|+.||+|....
T Consensus 141 Iv~~H~g~-----------tsek~~la-~~~dg~Vd~VvGgHTHv~t~ 176 (252)
T 2z06_A 141 LVEVHAEA-----------TSEKMALA-HYLDGRASAVLGTHTHVPTL 176 (252)
T ss_dssp EEEEECSC-----------HHHHHHHH-HHHBTTBSEEEEESSCSCBS
T ss_pred EEEeCCCc-----------HHHHHHHH-HhCCCCeEEEEcCCCCcCCC
Confidence 99999532 11112222 22234699999999998543
|
| >1t70_A Phosphatase; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI, protein STR initiative; 2.30A {Deinococcus radiodurans} SCOP: d.159.1.9 | Back alignment and structure |
|---|
Probab=97.89 E-value=0.00052 Score=61.50 Aligned_cols=171 Identities=12% Similarity=0.068 Sum_probs=85.6
Q ss_pred cEEEEEecCCCCCCchhh----HHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccCCeEEccCCCc
Q 040421 99 YTFGLIGDLGQTYYSNRT----LTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHE 174 (407)
Q Consensus 99 ~~f~~~gD~~~~~~~~~~----l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD 174 (407)
+|++++||.=... .... +.++.++ . |++|..|+.+..... - . ....+.+..+ ..- ..++||||
T Consensus 1 m~ilf~GDv~g~~-G~~~~~~~l~~lr~~--~-d~vi~nge~~~~G~g--~-~---~~~~~~l~~~--G~D-a~TlGNHe 67 (255)
T 1t70_A 1 MRVLFIGDVFGQP-GRRVLQNHLPTIRPQ--F-DFVIVNMENSAGGFG--M-H---RDAARGALEA--GAG-CLTLGNHA 67 (255)
T ss_dssp CEEEEECCBBHHH-HHHHHHHHHHHHGGG--C-SEEEEECTBTTTTSS--C-C---HHHHHHHHHH--TCS-EEECCTTT
T ss_pred CEEEEEeccCChH-HHHHHHHHHHHHHhh--C-CEEEECCCCccCCcC--C-C---HHHHHHHHhC--CCC-EEEecccc
Confidence 5899999974221 1222 3344443 4 999988888754311 0 1 1223333332 223 44789999
Q ss_pred cccCCCCCCccccccccc-ccccCCCCC--CCCCCeEEEEecCcEE--EEEEeccccCCCChHHHHHHHHhccccCCCCC
Q 040421 175 IDFAPQLGEAIPFKPFAN-RFHLPYRAP--YSTAPFWYSIRRASAH--IIVMSCYSAFGKYTPQYKWLEKEFPKVNRSET 249 (407)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~-~f~~P~~~~--~~~~~~~ysf~~g~v~--fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~ 249 (407)
+... +...+-.-.. +.-.|.|-+ +..+..|.-++.++.+ +|.|-+.........-.+-+++.+++. +.
T Consensus 68 fD~~----~l~~~l~~~~~~~~~~aN~~~~~~pg~g~~I~~~~G~kIgVigl~g~~~~~~~~~p~~~~~~~v~~l---~~ 140 (255)
T 1t70_A 68 WHHK----DIYPMLSEDTYPIVRPLNYADPGTPGVGWRTFDVNGEKLTVVNLLGRVFMEAVDNPFRTMDALLERD---DL 140 (255)
T ss_dssp TSST----THHHHHHTTCSCEECCSCCCCTTCSSCSEEEEECSSSEEEEEEEECCTTSCCCSCHHHHHHHHTTCS---SC
T ss_pred ccCc----hHHHHHhhCCCcEEEEeccCCCCCCCCCeEEEEECCEEEEEEEeecCcCcccccCHHHHHHHHHHHh---CC
Confidence 9632 1111100011 111233321 1123456667777754 455544321112233344456666554 46
Q ss_pred CeEEEEeeccccccCCCCCCCChhHHHHHHHHHHhCCCcEEEeccccccccc
Q 040421 250 PWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAYERS 301 (407)
Q Consensus 250 ~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~ 301 (407)
+.+||.+|.-. ....+.+.. .-.-+||+++.||+|.....
T Consensus 141 d~IIv~~H~e~-----------t~Ek~~la~-~~dg~vd~VvGgHTHv~~~d 180 (255)
T 1t70_A 141 GTVFVDFHAEA-----------TSEKEAMGW-HLAGRVAAVIGTHTHVPTAD 180 (255)
T ss_dssp CEEEEEEECSC-----------HHHHHHHHH-HHTTSSSEEEEESSCSCBSC
T ss_pred CEEEEEeCCCC-----------hHHHHHHHH-hCCCCeEEEEeCCCCcCCCc
Confidence 68999999421 111222322 22346999999999976543
|
| >3gve_A YFKN protein; alpha-beta-BETA-alpha sandwich, structural genomics, PSI-2, structure initiative; HET: CIT; 1.25A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=97.83 E-value=9.2e-05 Score=69.80 Aligned_cols=49 Identities=14% Similarity=0.087 Sum_probs=28.3
Q ss_pred CCCCeEEEEeeccccccCCCCCCCChhHHHHHHHHHHhCCCcEEEeccccccc
Q 040421 247 SETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAYE 299 (407)
Q Consensus 247 ~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~ 299 (407)
.++..+|+++|...-........++ ....|..-+ -+||++|.||.|...
T Consensus 206 ~g~D~II~l~H~G~~~d~~~~~~e~--~~~~lA~~v--~giD~IigGHsH~~~ 254 (341)
T 3gve_A 206 EGADVIIALAHTGIEKQAQSSGAEN--AVFDLATKT--KGIDAIISGHQHGLF 254 (341)
T ss_dssp TTCSEEEEEECCCCCSSCCCTTCSS--CHHHHHHHC--SCCCEEEECSSCCEE
T ss_pred cCCCEEEEEeccCccccccccccch--hHHHHHhcC--CCCcEEEECCCCccC
Confidence 4577999999987633211100111 111222222 489999999999853
|
| >3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=97.70 E-value=0.00046 Score=64.86 Aligned_cols=47 Identities=19% Similarity=0.217 Sum_probs=27.4
Q ss_pred CCCCeEEEEeeccccccCCCCCCCChhHHHHHHHHHHh-CCCcEEEeccccccc
Q 040421 247 SETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVE-YKVDVVFAAHVHAYE 299 (407)
Q Consensus 247 ~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~-~~vdlvl~GH~H~y~ 299 (407)
.++..+|+++|...-........++. . .++.+ -+||++|.||.|...
T Consensus 200 ~g~D~II~l~H~G~~~d~~~~~~en~--~----~~~~~v~gID~IlgGHsH~~~ 247 (339)
T 3jyf_A 200 KGADVVVVVAHSGLSADPYQAMAENS--V----YYLSQVPGVDAIMFGHAHAVF 247 (339)
T ss_dssp TTCSEEEEEECCCCCCSCCCTTCSCC--H----HHHTTSTTCCEEEECSSCSEE
T ss_pred cCCCEEEEEeccCccccccccccchh--H----HHHhhCCCCCEEEeCCCcccc
Confidence 45778999999876221110001111 1 11223 489999999999854
|
| >4h1s_A 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.56 E-value=0.00036 Score=69.95 Aligned_cols=75 Identities=15% Similarity=0.103 Sum_probs=41.6
Q ss_pred eEEEEecCcE--EEEEEeccc------c-----CCCChHHHHHHHHhccccCCCCCCeEEEEeeccccccCCCCCCCChh
Q 040421 207 FWYSIRRASA--HIIVMSCYS------A-----FGKYTPQYKWLEKEFPKVNRSETPWLIVLMHCPLYNSYVHHYMEGEP 273 (407)
Q Consensus 207 ~~ysf~~g~v--~fi~Lds~~------~-----~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~ 273 (407)
.|.-++.+++ -||.+-+.. . +...-+..+...++|++ .++..+|+++|...-
T Consensus 135 py~I~~~~g~kIgviGltt~~~~~~~~~~~~~~f~d~v~~~~~~v~~Lr~---~g~D~II~LsH~G~~------------ 199 (530)
T 4h1s_A 135 PYKVLPVGDEVVGIVGYTSKETPFLSNPGTNLVFEDEITALQPEVDKLKT---LNVNKIIALGHSGFE------------ 199 (530)
T ss_dssp SEEEEEETTEEEEEEEEECTTHHHHSCCCTTEEECCHHHHHHHHHHHHHH---TTCCCEEEEEESCHH------------
T ss_pred ceEEEEeccEEEeeccccccceeeeccCCCCcccCcHHHHHHHHHhhhhh---cCCCEEEEeccCCch------------
Confidence 3556777775 556665521 0 01111223333344544 456789999996531
Q ss_pred HHHHHHHHHHhC-CCcEEEeccccccc
Q 040421 274 MRVLYEPWFVEY-KVDVVFAAHVHAYE 299 (407)
Q Consensus 274 ~~~~l~~l~~~~-~vdlvl~GH~H~y~ 299 (407)
... .+.++. +||++|.||+|.+-
T Consensus 200 ~d~---~la~~v~giD~IlgGHsH~~~ 223 (530)
T 4h1s_A 200 MDK---LIAQKVRGVDVVVGGHSNTFL 223 (530)
T ss_dssp HHH---HHHHHSTTCCEEECCSSCCCB
T ss_pred HHH---HHHhcCCCCCeeccCCcccee
Confidence 111 233333 79999999999753
|
| >1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=97.41 E-value=8.8e-05 Score=65.42 Aligned_cols=68 Identities=24% Similarity=0.234 Sum_probs=42.0
Q ss_pred CCcEEEEEecCCCCCCchh-hHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccCCeEEccCCCcc
Q 040421 97 VPYTFGLIGDLGQTYYSNR-TLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHEI 175 (407)
Q Consensus 97 ~~~~f~~~gD~~~~~~~~~-~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~ 175 (407)
...+++++||+|....... .++.+... .++|.++++||++.... . . . +.++.+. ..++++++||||.
T Consensus 11 ~~~~i~visDiHg~~~~l~~~l~~~~~~-~~~d~~i~~GD~~~~g~----~-~--~---~~~~~l~-~~~~~~v~GNhd~ 78 (221)
T 1g5b_A 11 KYRNIWVVGDLHGCYTNLMNKLDTIGFD-NKKDLLISVGDLVDRGA----E-N--V---ECLELIT-FPWFRAVRGNHEQ 78 (221)
T ss_dssp GCSCEEEECCCTTCHHHHHHHHHHHTCC-TTTCEEEECSCCSSSSS----C-H--H---HHHGGGG-STTEEECCCHHHH
T ss_pred CCceEEEEEcCCCCHHHHHHHHHHccCC-CCCCEEEEeCCccCCCC----C-h--H---HHHHHHh-cCCEEEEccCcHH
Confidence 3579999999996532222 22222222 26899999999995421 1 1 1 2222222 3589999999997
Q ss_pred c
Q 040421 176 D 176 (407)
Q Consensus 176 ~ 176 (407)
.
T Consensus 79 ~ 79 (221)
T 1g5b_A 79 M 79 (221)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=97.30 E-value=0.00018 Score=65.83 Aligned_cols=68 Identities=22% Similarity=0.275 Sum_probs=40.8
Q ss_pred cEEEEEecCCCCCCchhh-HHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccCCeEEccCCCccc
Q 040421 99 YTFGLIGDLGQTYYSNRT-LTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHEID 176 (407)
Q Consensus 99 ~~f~~~gD~~~~~~~~~~-l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~ 176 (407)
++++++||+|........ ++.+... .++|.++++||++.... .. .+..+.+..+. .+++.++||||..
T Consensus 1 M~i~vigDiHG~~~~l~~ll~~~~~~-~~~d~~v~lGD~vdrG~----~s---~~~l~~l~~l~--~~~~~v~GNHe~~ 69 (280)
T 2dfj_A 1 MATYLIGDVHGCYDELIALLHKVEFT-PGKDTLWLTGDLVARGP----GS---LDVLRYVKSLG--DSVRLVLGNHDLH 69 (280)
T ss_dssp -CEEEECCCCSCHHHHHHHHHHTTCC-TTTCEEEECSCCSSSSS----CH---HHHHHHHHHTG--GGEEECCCHHHHH
T ss_pred CeEEEEecCCCCHHHHHHHHHHhCCC-CCCCEEEEeCCcCCCCC----cc---HHHHHHHHhCC--CceEEEECCCcHH
Confidence 478999999975422222 2222221 26799999999996421 11 22333333332 3799999999974
|
| >2ede_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.20 E-value=0.002 Score=49.77 Aligned_cols=76 Identities=28% Similarity=0.428 Sum_probs=49.4
Q ss_pred CCCcEEEEEEcCCCCC----CCEEEEeecCCCC---ceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc---
Q 040421 9 EGKGVIVSWVTPDEPG----SNTVLYWAENSTL---KQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV--- 78 (407)
Q Consensus 9 ~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~--- 78 (407)
.++++.|.|..+.... ...|+|....+.. +.... . ......++|++|+|+|.|.+||..
T Consensus 23 ~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~--~---------~~~~~~~~i~~L~p~t~Y~~~V~A~n~ 91 (114)
T 2ede_A 23 KPRAVIVSWQPPLEANGKITAYILFYTLDKNIPIDDWIMET--I---------SGDRLTHQIMDLNLDTMYYFRIQARNS 91 (114)
T ss_dssp CSSCEEEEEECCSSCSSCCSEEEEEEESCSSSCTTTSEEEE--E---------ETTCCEEEECSCCSSCEEEEEEEEECS
T ss_pred CCCEEEEEECCCCCCCCceeEEEEEEEeCCCCCccceEEEE--E---------CCCceEEEEcCCCCCCEEEEEEEEEeC
Confidence 5689999999875322 3467776643321 11111 0 012335788999999999999954
Q ss_pred ---CCceeeEEEEcCCCCCC
Q 040421 79 ---GNATRQFSFTTPPGVGP 95 (407)
Q Consensus 79 ---~~~s~~~~F~T~p~~~~ 95 (407)
+.+|....|+|.+.+.+
T Consensus 92 ~G~g~~S~~~~~~T~~~~pp 111 (114)
T 2ede_A 92 KGVGPLSDPILFRTLKVSGP 111 (114)
T ss_dssp SCBCCCCCCEEEECCCSSCC
T ss_pred CcCcCCcccEEEEecCCCCC
Confidence 35678889999876543
|
| >2edd_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.18 E-value=0.00095 Score=52.84 Aligned_cols=75 Identities=21% Similarity=0.128 Sum_probs=49.3
Q ss_pred ccCCCCCcEEEEEEcCCCCC--------CCEEEEeecCCC--CceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEE
Q 040421 5 QGDHEGKGVIVSWVTPDEPG--------SNTVLYWAENST--LKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYY 74 (407)
Q Consensus 5 ~g~~~~~~~~v~W~t~~~~~--------~~~v~y~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 74 (407)
......+++.|.|....... ...|+|...... ....+.. ....++|+||+|+|.|.+
T Consensus 27 ~~~~s~tsi~lsW~~p~~~~~~i~~~~~~Y~v~y~~~~~~~~~~~~~~~-------------~~~~~~v~gL~P~T~Y~f 93 (123)
T 2edd_A 27 AVALTHDAVRVSWADNSVPKNQKTSEVRLYTVRWRTSFSASAKYKSEDT-------------TSLSYTATGLKPNTMYEF 93 (123)
T ss_dssp EEEEETTEEEEEEECSSSCSSCCCSCCCCEEEEEEETTCTTCCCCCEEE-------------SSSEEEEESCCTTCEEEE
T ss_pred EEEcCCCeEEEEecCCCCCcccccCcCceEEEEEEECCCCCccEEEEeC-------------CceEEEecCCCCCCEEEE
Confidence 33345689999999653222 456788876321 1111111 123578999999999999
Q ss_pred EeCc------CCceeeEEEEcCCC
Q 040421 75 EVGV------GNATRQFSFTTPPG 92 (407)
Q Consensus 75 ~v~~------~~~s~~~~F~T~p~ 92 (407)
+|.. +.+|....|+|.+.
T Consensus 94 ~V~A~n~~g~g~~S~~v~~~T~~~ 117 (123)
T 2edd_A 94 SVMVTKNRRSSTWSMTAHATTYEA 117 (123)
T ss_dssp EEEECCSSSCCCCCCCEEEECCCS
T ss_pred EEEEeCCCcccCCCCCEEEEccCC
Confidence 9954 35788889999865
|
| >1x5l_A Ephrin type-A receptor 8; FN3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.17 E-value=0.0015 Score=50.13 Aligned_cols=82 Identities=20% Similarity=0.384 Sum_probs=52.5
Q ss_pred eeccCCCCCcEEEEEEcCCCC----CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 3 ITQGDHEGKGVIVSWVTPDEP----GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
|.......+++.|.|..+... ....|+|.............. .-...++|++|+|+|.|.+||..
T Consensus 17 l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~-----------~~~~~~~i~~L~p~t~Y~~~V~A 85 (111)
T 1x5l_A 17 IRQERAGQTSVSLLWQEPEQPNGIILEYEIKYYEKDKEMQSYSTLK-----------AVTTRATVSGLKPGTRYVFQVRA 85 (111)
T ss_dssp EECSCBCSSCEEEEECCCSCCCSCCCEEEEEEEESSSCCSSCEEEE-----------ESSSEEEECSCCTTCEEEECEEE
T ss_pred EEEEEcCCCEEEEEECCCCCCCCEEEEEEEEEEECCCCceeEEEec-----------CCCCEEEEcCCCCCCEEEEEEEE
Confidence 444455678999999876432 234677776542221111100 11235688999999999999954
Q ss_pred ------CCceeeEEEEcCCCCCC
Q 040421 79 ------GNATRQFSFTTPPGVGP 95 (407)
Q Consensus 79 ------~~~s~~~~F~T~p~~~~ 95 (407)
+.+|....|+|++.+++
T Consensus 86 ~n~~G~g~~S~~~~~~T~~~~~p 108 (111)
T 1x5l_A 86 RTSAGCGRFSQAMEVETGKPSGP 108 (111)
T ss_dssp EETTEECCCCCCEEEECCCTTSC
T ss_pred EeCCcCCCCcccEEEEcCCCCCC
Confidence 35778889999876543
|
| >2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=97.17 E-value=0.00029 Score=63.83 Aligned_cols=68 Identities=21% Similarity=0.160 Sum_probs=39.9
Q ss_pred CcEEEEEecCCCCCCchhhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccCCeEEccCCCccc
Q 040421 98 PYTFGLIGDLGQTYYSNRTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHEID 176 (407)
Q Consensus 98 ~~~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~ 176 (407)
..+++++||+|........+-+........|.+|++||++.... .. .+..+.+.. .++++++||||..
T Consensus 18 ~~~i~visDiHg~~~~l~~~l~~~~~~~~~d~ii~~GD~vd~g~----~~---~~~l~~l~~----~~~~~v~GNHd~~ 85 (262)
T 2qjc_A 18 TGRVIIVGDIHGCRAQLEDLLRAVSFKQGSDTLVAVGDLVNKGP----DS---FGVVRLLKR----LGAYSVLGNHDAK 85 (262)
T ss_dssp CSCEEEECCCTTCHHHHHHHHHHHTCCTTTSEEEECSCCSSSSS----CH---HHHHHHHHH----HTCEECCCHHHHH
T ss_pred CCeEEEEeCCCCCHHHHHHHHHHHhccCCCCEEEEecCCCCCCC----CH---HHHHHHHHH----CCCEEEeCcChHH
Confidence 34899999999543222222112222112499999999996421 11 122333322 4899999999974
|
| >1x4y_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.08 E-value=0.0037 Score=48.36 Aligned_cols=81 Identities=12% Similarity=0.143 Sum_probs=50.9
Q ss_pred eeccCCCCCcEEEEEEcCCC------CCCCEEEEeecCCC---CceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEE
Q 040421 3 ITQGDHEGKGVIVSWVTPDE------PGSNTVLYWAENST---LKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYY 73 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~------~~~~~v~y~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~ 73 (407)
|.......+++.|.|.-... ...-.|.|...... ..... .+. .. ...++|++|+|+|.|.
T Consensus 15 ~~~~~~~~~si~l~W~~p~~~~~~g~i~gY~v~y~~~~~~~~~~~~~~--~~~-------~~--~~~~~i~~L~p~t~Y~ 83 (114)
T 1x4y_A 15 TFTDAVNETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKKD--MVE-------GD--RYWHSISHLQPETSYD 83 (114)
T ss_dssp EEEECSSSSCEEEEEECCCTTSCCCCCCEEEEEECCTTSCSGGGCCCE--EEE-------TT--CCEEEECSCCTTCEEE
T ss_pred EEEEecCCCEEEEEEeCCCchhcCCccceEEEEEEECCCCCCcceeeE--ecC-------Cc--EeEEEcCCCCCCCEEE
Confidence 34445567899999998741 12246777655432 11111 100 01 1347899999999999
Q ss_pred EEeCc------CCceeeEEEEcCCCCC
Q 040421 74 YEVGV------GNATRQFSFTTPPGVG 94 (407)
Q Consensus 74 Y~v~~------~~~s~~~~F~T~p~~~ 94 (407)
++|.. +.+|....|+|.+.+.
T Consensus 84 ~~V~A~n~~G~g~~S~~v~~~T~~~~~ 110 (114)
T 1x4y_A 84 IKMQCFNEGGESEFSNVMICETKARSG 110 (114)
T ss_dssp EEEEEECTTCCCCCCCCEEEECCCCCC
T ss_pred EEEEEEcCCccCCCcCCEEEEeCCCCC
Confidence 99953 3567888999987543
|
| >2djs_A Ephrin type-B receptor 1; tyrosine-protein kinase receptor EPH-2, NET, HEK6, ELK, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=97.02 E-value=0.0012 Score=50.60 Aligned_cols=78 Identities=17% Similarity=0.316 Sum_probs=48.8
Q ss_pred ccCCCCCcEEEEEEcCCCCC----CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc--
Q 040421 5 QGDHEGKGVIVSWVTPDEPG----SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV-- 78 (407)
Q Consensus 5 ~g~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~-- 78 (407)
......+++.|.|.-+.... ...|+|.............. .-...++|++|+|+|.|.+||..
T Consensus 16 ~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~-----------~~~~~~~l~~L~p~t~Y~~~V~A~n 84 (108)
T 2djs_A 16 QVSATMRSITLSWPQPEQPNGIILDYEIRYYEKEHNEFNSSMAR-----------SQTNTARIDGLRPGMVYVVQVRART 84 (108)
T ss_dssp EEEECSSEEEEECCCCSCCSSCEEEEEEEEEETTSCSTTCEEEE-----------ESSSEEEEESCCTTCEEEEEEEEEE
T ss_pred EEecCCCEEEEEECCCCCCCCeEEEEEEEEEECCCCCcceeEEe-----------cCccEEEEcCCCCCCEEEEEEEEEe
Confidence 33445689999999875432 23566666543222111100 11234678999999999999964
Q ss_pred ----CCceeeEEEEcCCCC
Q 040421 79 ----GNATRQFSFTTPPGV 93 (407)
Q Consensus 79 ----~~~s~~~~F~T~p~~ 93 (407)
+.+|....|+|++..
T Consensus 85 ~~G~g~~S~~~~~~T~~~~ 103 (108)
T 2djs_A 85 VAGYGKFSGKMCFQTLTDS 103 (108)
T ss_dssp SSCEEEECCCEEEECCCSS
T ss_pred CCEECCCCCCEEEEeCCCC
Confidence 246777889998754
|
| >2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C* | Back alignment and structure |
|---|
Probab=96.96 E-value=0.00086 Score=62.05 Aligned_cols=71 Identities=15% Similarity=0.075 Sum_probs=41.7
Q ss_pred CcEEEEEecCCCCCCchhhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhc--cCCeEEccCCCcc
Q 040421 98 PYTFGLIGDLGQTYYSNRTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAA--YQPWIWTVGNHEI 175 (407)
Q Consensus 98 ~~~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~--~~P~~~~~GNHD~ 175 (407)
..+++++||+|........+-+.... ...+.++++||++.... .. .+-...+..+.. .-.++.+.||||.
T Consensus 49 ~~~i~viGDIHG~~~~L~~ll~~~~~-~~~~~~vflGD~VDRG~----~s---~evl~lL~~lk~~~p~~v~~lrGNHE~ 120 (309)
T 2ie4_C 49 RCPVTVCGDVHGQFHDLMELFRIGGK-SPDTNYLFMGDYVDRGY----YS---VETVTLLVALKVRYRERITILRGNHES 120 (309)
T ss_dssp CSSEEEECCCTTCHHHHHHHHHHHCC-TTTSCEEECSCCSSSST----TH---HHHHHHHHHHHHHCTTTEEECCCTTSS
T ss_pred cCCEEEEecCCCCHHHHHHHHHHcCC-CCCCEEEEeCCccCCCC----Ch---HHHHHHHHHHHhhCCCcEEEEeCCCCH
Confidence 35799999999754332222222222 25677899999996432 11 122333333322 2358999999998
Q ss_pred c
Q 040421 176 D 176 (407)
Q Consensus 176 ~ 176 (407)
.
T Consensus 121 ~ 121 (309)
T 2ie4_C 121 R 121 (309)
T ss_dssp T
T ss_pred H
Confidence 4
|
| >2edy_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.95 E-value=0.00074 Score=51.11 Aligned_cols=76 Identities=24% Similarity=0.225 Sum_probs=47.5
Q ss_pred eeccCCCCCcEEEEEEcCC--CC----CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEe
Q 040421 3 ITQGDHEGKGVIVSWVTPD--EP----GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEV 76 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~--~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v 76 (407)
|.......+++.|.|.... .. ..-.|+|............+ -...+.|+||+|+|.|.++|
T Consensus 15 l~~~~~~~~si~l~W~~p~~~~~~g~i~~Y~i~~~~~~~~~~~~~~~-------------~~~~~~i~~L~p~t~Y~~~V 81 (103)
T 2edy_A 15 LHVTGLTTSTTELAWDPPVLAERNGRIISYTVVFRDINSQQELQNIT-------------TDTRFTLTGLKPDTTYDIKV 81 (103)
T ss_dssp EECSSBCSSCEECEEECCCTTSCSSCCCEEEEEEEETTSCCEEEEEE-------------SSSCCEECSCCTTCCEEEEC
T ss_pred eEEEecCCCEEEEEECCCCCcCCCCcEeEEEEEEEECCCCccEEEcC-------------CcceEEEcCCCCCCEEEEEE
Confidence 4455556789999999872 11 23467777665422211111 12235789999999999999
Q ss_pred Cc------CCceeeEEEEcCC
Q 040421 77 GV------GNATRQFSFTTPP 91 (407)
Q Consensus 77 ~~------~~~s~~~~F~T~p 91 (407)
.. +.+|....|+|.|
T Consensus 82 ~A~n~~G~g~~S~~~~~~T~p 102 (103)
T 2edy_A 82 RAWTSKGSGPLSPSIQSRTMP 102 (103)
T ss_dssp CEECSSCBCCCCCCCCCCCCC
T ss_pred EEECCCCCCCCCCCEEEEecc
Confidence 64 2456666677754
|
| >2dm4_A Sortilin-related receptor; beta-sandwich, sorting protein-related receptor containing LDLR class A repeats, sorla; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.93 E-value=0.0038 Score=47.67 Aligned_cols=71 Identities=21% Similarity=0.243 Sum_probs=47.1
Q ss_pred CCCCcEEEEEEcCCCCCC----CEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc-----
Q 040421 8 HEGKGVIVSWVTPDEPGS----NTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV----- 78 (407)
Q Consensus 8 ~~~~~~~v~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~----- 78 (407)
...+++.|.|.-+..... ..|+|....+..+..... . ...++|++|+|+|.|.+||..
T Consensus 21 ~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~-----------~--~~~~~l~~L~p~t~Y~~~V~A~n~~G 87 (108)
T 2dm4_A 21 EAEGVIVGHWAPPIHTHGLIREYIVEYSRSGSKMWASQRA-----------A--SNFTEIKNLLVNTLYTVRVAAVTSRG 87 (108)
T ss_dssp TCSSCEEEEEECCSCCSSCEEEEEEEEEETTCSCCEEEEE-----------S--SSEEEECSCCSSCEEEEEEEEEESSC
T ss_pred cCCCEEEEEEcCCCCCCCcEEEEEEEEEECCCCCeEEecC-----------C--ccEEEeCCCCCCCEEEEEEEEECCCc
Confidence 356899999998753222 456676665433332211 0 125789999999999999964
Q ss_pred -CCceeeEEEEcCC
Q 040421 79 -GNATRQFSFTTPP 91 (407)
Q Consensus 79 -~~~s~~~~F~T~p 91 (407)
+.+|....|+|.+
T Consensus 88 ~g~~S~~~~~~T~~ 101 (108)
T 2dm4_A 88 IGNWSDSKSITTIK 101 (108)
T ss_dssp EEEECCCEEEECCS
T ss_pred eeCCCCCEEEECCC
Confidence 2467778888854
|
| >1x4x_A Fibronectin type-III domain containing protein 3A; FN3, immunoglobulin-like beta- sandwich fold, KIAA0970, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.88 E-value=0.0019 Score=49.32 Aligned_cols=73 Identities=21% Similarity=0.289 Sum_probs=46.7
Q ss_pred CCCCcEEEEEEcCCCCC----CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc-----
Q 040421 8 HEGKGVIVSWVTPDEPG----SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV----- 78 (407)
Q Consensus 8 ~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~----- 78 (407)
...+++.|.|..+...+ ...|+|............+ ....++|++|+|+|.|.+||..
T Consensus 19 ~s~~sv~l~W~~p~~~g~~i~~Y~v~~~~~~~~~~~~~~~-------------~~~~~~v~~L~p~t~Y~frV~A~n~~G 85 (106)
T 1x4x_A 19 RSATCAQVNWEVPLSNGTDVTEYRLEWGGVEGSMQICYCG-------------PGLSYEIKGLSPATTYYCRVQALSVVG 85 (106)
T ss_dssp EETTEEEEECCCCSCSSSCCCEEEEEEESSTTSCCEEEEE-------------SCSEEEEESCCSSCEEEEEEEEECSSC
T ss_pred cCCCEEEEEEcCCCCCCCcceEEEEEEEcCCCceEEEEeC-------------CcceEEEcCCCCCCEEEEEEEEEcCCc
Confidence 34689999999875322 2356666544322111111 1124678999999999999954
Q ss_pred -CCceeeEEEEcCCCC
Q 040421 79 -GNATRQFSFTTPPGV 93 (407)
Q Consensus 79 -~~~s~~~~F~T~p~~ 93 (407)
+.+|....++|.+..
T Consensus 86 ~g~~S~~v~~~T~~~~ 101 (106)
T 1x4x_A 86 AGPFSEVVACVTPPSS 101 (106)
T ss_dssp CCCBCCCEEEECCCCC
T ss_pred CCCCcCCEEEECCCCC
Confidence 246788889997653
|
| >1x5a_A Ephrin type-A receptor 1; tyrosine-protein kinase receptor, ESK, fibronectin type III (FN3) domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.87 E-value=0.0028 Score=48.65 Aligned_cols=75 Identities=21% Similarity=0.345 Sum_probs=47.1
Q ss_pred cCCCCCcEEEEE--EcCCCC---CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc--
Q 040421 6 GDHEGKGVIVSW--VTPDEP---GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV-- 78 (407)
Q Consensus 6 g~~~~~~~~v~W--~t~~~~---~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~-- 78 (407)
.....+++.|.| .-+... ..-.|+|....+ . .. +... ... ++|+||+|+|.|.+||..
T Consensus 19 ~~~~~~sv~l~W~~~~P~~~ng~~~Y~v~y~~~~~--~----~~---~~~~--~~~----~~i~~L~p~t~Y~f~V~A~~ 83 (107)
T 1x5a_A 19 VKKEPRQLELTWAGSRPRNPGGNLSYELHVLNQDE--E----WH---QMVL--EPR----VLLTKLQPDTTYIVRVRTLT 83 (107)
T ss_dssp EEEETTEEEEECCCCCSSCCSSCCEEEEEEECSSC--E----EE---EEES--SSE----EEEESCCSSCEEEEEEEEEC
T ss_pred EecCCCEEEEEECCCCCCCCCCceEEEEEEEeCCC--C----ce---EEEe--cce----EEECCCCCCCEEEEEEEEEC
Confidence 334568999999 655322 223566655411 0 01 1100 111 899999999999999954
Q ss_pred ----CCceeeEEEEcCCCCCC
Q 040421 79 ----GNATRQFSFTTPPGVGP 95 (407)
Q Consensus 79 ----~~~s~~~~F~T~p~~~~ 95 (407)
+.+|....|+|.+..++
T Consensus 84 ~~G~g~~S~~~~~~T~~~~gp 104 (107)
T 1x5a_A 84 PLGPGPFSPDHEFRTSPPSGP 104 (107)
T ss_dssp SSSCCCCCCCEEEECCCCSCC
T ss_pred CCccCCCCCCEEEEECCCCCC
Confidence 35788889999886554
|
| >3e0j_A DNA polymerase subunit delta-2; DNA polymerase delta, P66 subunit, P50 subunit, human, DNA replication, DNA-directed DNA polymerase; HET: DNA; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.85 E-value=0.0094 Score=57.94 Aligned_cols=178 Identities=13% Similarity=0.133 Sum_probs=95.3
Q ss_pred CCCcEEEEEecCCCCCCch---hh---HHHhhh-C---------CCCCceEEEcCCccccCCCCCC----C---------
Q 040421 96 DVPYTFGLIGDLGQTYYSN---RT---LTHYEL-N---------PIKGQTVLFVGDLSYADDYPFH----D--------- 146 (407)
Q Consensus 96 ~~~~~f~~~gD~~~~~~~~---~~---l~~~~~-~---------~~~~d~vl~~GD~~y~~~~~~~----~--------- 146 (407)
....++++++|.+.+.... .. +..++. + ..+..-+|++||.+...+.... .
T Consensus 198 ~~~~~ialVSGL~igs~~~~~~~~~~ll~d~L~G~~g~~~~~~~as~I~rlIIAGn~v~~~~~~~e~~~~~~y~~~~~~~ 277 (476)
T 3e0j_A 198 DTDRFVLLVSGLGLGGGGGESLLGTQLLVDVVTGQLGDEGEQCSAAHVSRVILAGNLLSHSTQSRDSINKAKYLTKKTQA 277 (476)
T ss_dssp SSCCEEEEECCCCBTSSCHHHHHHHHHHHHHHHTCSSCHHHHHHHTTEEEEEEESCSBCC-------------CHHHHHH
T ss_pred CCCCEEEEECCcccCCCcccchHHHHHHHHHHcCCCCCccccchhhceeEEEEECCccccccccchhhhhhhccccccch
Confidence 3567999999999987531 11 222221 0 1367889999999965421000 0
Q ss_pred --chhhhHHHHHHhhhhccCCeEEccCCCccccCCCCCCccccc--------ccccccccCCCCCCCCCCeEEEEecCcE
Q 040421 147 --NNRWDTWGRFIERNAAYQPWIWTVGNHEIDFAPQLGEAIPFK--------PFANRFHLPYRAPYSTAPFWYSIRRASA 216 (407)
Q Consensus 147 --~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~~~~~~~~~~~~~--------~~~~~f~~P~~~~~~~~~~~ysf~~g~v 216 (407)
....+.+-+++..+...+|+...|||||-. +.... +.++. .|. .+.. ..|. |.|+++++
T Consensus 278 ~~~~~~~~ld~~L~~l~~~i~V~lmPG~~DP~-~~~lP-Qqplh~~lfp~s~~~~-~~~~-------vtNP-~~~~i~G~ 346 (476)
T 3e0j_A 278 ASVEAVKMLDEILLQLSASVPVDVMPGEFDPT-NYTLP-QQPLHPCMFPLATAYS-TLQL-------VTNP-YQATIDGV 346 (476)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCEEEECCTTSSS-CSSSS-CCCCCTTSCHHHHTST-TEEE-------CCSS-EEEEETTE
T ss_pred hhHHHHHHHHHHHHhcccCceEEecCCCCCcc-cccCC-CCCcCHHHhhhhhhcC-ccEE-------eCCC-eEEEECCE
Confidence 013344556677778899999999999974 21111 11111 110 1111 1122 56888999
Q ss_pred EEEEEeccc-----cCCCChHHHHHHHHhccccCC-CCCCeEEEEeeccccccCCCCCCCChhHHHHHHHHHHhCCCcEE
Q 040421 217 HIIVMSCYS-----AFGKYTPQYKWLEKEFPKVNR-SETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVV 290 (407)
Q Consensus 217 ~fi~Lds~~-----~~~~~~~Q~~WL~~~L~~~~~-~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlv 290 (407)
+|++..... .+...+.-++.|++.|+.-.- ..++=.+ |.|+.... .+++-+.-.+++
T Consensus 347 ~~LgtsGqnidDi~ky~~~~~~l~~me~~LkwrHlAPTaPdTl-----~~yP~~~~------------DpfVi~~~PhVy 409 (476)
T 3e0j_A 347 RFLGTSGQNVSDIFRYSSMEDHLEILEWTLRVRHISPTAPDTL-----GCYPFYKT------------DPFIFPECPHVY 409 (476)
T ss_dssp EEEECSSHHHHHHHHHSCCCCHHHHHHHHHHBTCSCTTSCCC-----------CCS------------CTTSCSSCCSEE
T ss_pred EEEEECCCCHHHHHhcCCCCCHHHHHHHHHHHhccCCCCCCce-----eeccCCCC------------CceeecCCCcEE
Confidence 999876532 123344567788888875100 1111000 11111000 012224457899
Q ss_pred Eeccccccccc
Q 040421 291 FAAHVHAYERS 301 (407)
Q Consensus 291 l~GH~H~y~r~ 301 (407)
++||.|.|+-.
T Consensus 410 f~Gnq~~f~t~ 420 (476)
T 3e0j_A 410 FCGNTPSFGSK 420 (476)
T ss_dssp EEEEESSCEEE
T ss_pred EeCCCCcccee
Confidence 99999998744
|
| >1x5f_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.78 E-value=0.0036 Score=48.74 Aligned_cols=79 Identities=19% Similarity=0.286 Sum_probs=49.4
Q ss_pred eccCCCCCcEEEEEEcCC-CC----CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 4 TQGDHEGKGVIVSWVTPD-EP----GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 4 ~~g~~~~~~~~v~W~t~~-~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
.......++++|.|..+. .. ....|+|.......+.... . ...-...++|++|+|+|.|.+||..
T Consensus 25 ~~~~~~~~sv~l~W~~p~~~~~g~i~~Y~v~~~~~~~~~~~~~~------~----~~~~~~~~~i~~L~p~t~Y~~~V~A 94 (120)
T 1x5f_A 25 VASLVSTRFIKLTWRTPASDPHGDNLTYSVFYTKEGIARERVEN------T----SHPGEMQVTIQNLMPATVYIFRVMA 94 (120)
T ss_dssp EEEEECSSCEEEEEECCSSCSSCCSSEEEEEEEETTCCCCEEEE------C----SSTTCSEEEECSCCTTCEEEEEEEE
T ss_pred EEEecCCCEEEEEECCCCCCCCCcEEEEEEEEEECCCCCceEEE------e----ccCCccEEEeCCCCCCCEEEEEEEE
Confidence 333445678999999865 22 1246777776432221110 0 0112345789999999999999964
Q ss_pred C------CceeeEEEEcCCC
Q 040421 79 G------NATRQFSFTTPPG 92 (407)
Q Consensus 79 ~------~~s~~~~F~T~p~ 92 (407)
- .+|....|+|.+.
T Consensus 95 ~n~~G~g~~S~~~~~~T~~~ 114 (120)
T 1x5f_A 95 QNKHGSGESSAPLRVETQPE 114 (120)
T ss_dssp ECSSCEEEECCCEEEECCCC
T ss_pred ECCCccCCCCCCEEEEeCCC
Confidence 1 3567788999754
|
| >3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} SCOP: d.159.1.3 PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A | Back alignment and structure |
|---|
Probab=96.77 E-value=0.0018 Score=59.86 Aligned_cols=72 Identities=17% Similarity=0.113 Sum_probs=40.9
Q ss_pred CcEEEEEecCCCCCCchhhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhh--ccCCeEEccCCCcc
Q 040421 98 PYTFGLIGDLGQTYYSNRTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNA--AYQPWIWTVGNHEI 175 (407)
Q Consensus 98 ~~~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~--~~~P~~~~~GNHD~ 175 (407)
..+++++||+|........+-+....+...+.++++||++.... +. .+-...+..+. ..-.++.+.||||.
T Consensus 59 ~~ri~viGDIHG~~~~L~~ll~~~g~~~~~~~~vflGD~VDRG~----~s---~evl~lL~~lk~~~p~~v~~lrGNHE~ 131 (315)
T 3h63_A 59 TEKITVCGDTHGQFYDLLNIFELNGLPSETNPYIFNGDFVDRGS----FS---VEVILTLFGFKLLYPDHFHLLRGNHET 131 (315)
T ss_dssp TCEEEEECCCTTCHHHHHHHHHHHCCCBTTBCEEEESCCSSSST----TH---HHHHHHHHHHHHHSTTTEEEECCTTSS
T ss_pred CceEEEEecCCCCHHHHHHHHHHhCCCCCCCEEEEeCCccCCCc----Ch---HHHHHHHHHhhhhcCCcEEEEecCccc
Confidence 56999999999764332222222222113356999999996532 11 11222332222 22358899999996
Q ss_pred c
Q 040421 176 D 176 (407)
Q Consensus 176 ~ 176 (407)
.
T Consensus 132 ~ 132 (315)
T 3h63_A 132 D 132 (315)
T ss_dssp H
T ss_pred c
Confidence 4
|
| >2haz_A N-CAM 1, neural cell adhesion molecule 1; fibronectin type III repeat, FN1, beta sandwich; 1.70A {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.77 E-value=0.004 Score=47.44 Aligned_cols=77 Identities=16% Similarity=0.167 Sum_probs=47.0
Q ss_pred CCCCCcEEEEEEcCCCC-----CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc---
Q 040421 7 DHEGKGVIVSWVTPDEP-----GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV--- 78 (407)
Q Consensus 7 ~~~~~~~~v~W~t~~~~-----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~--- 78 (407)
....+ +.|.|.-+... ..-.|+|.......+.... .... ...-...++|++|+|+|.|.+||..
T Consensus 17 ~~~~~-v~l~W~~P~~~~G~pi~~Y~v~~~~~~~~~~~~~~---~~~~----~~~~~~~~~i~~L~p~t~Y~~rV~A~n~ 88 (105)
T 2haz_A 17 PYSST-AQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKW---YDAK----EASMEGIVTIVGLKPETTYAVRLAALNG 88 (105)
T ss_dssp ECSSC-EEEEEECCSCCTTSCCCEEEEEEEETTCCCCEEEE---EEHH----HHHHHSEEEECSCCTTCEEEEEEEEEET
T ss_pred EcCCc-EEEEEcCCcccCCccccEEEEEEEECCCCCCccce---EEcc----ccCCccEEEECCCCCCCEEEEEEEEEcC
Confidence 33345 99999987432 1235777776543221110 0000 0012245689999999999999954
Q ss_pred ---CCceeeEEEEcCC
Q 040421 79 ---GNATRQFSFTTPP 91 (407)
Q Consensus 79 ---~~~s~~~~F~T~p 91 (407)
+..|....|+|.|
T Consensus 89 ~G~g~~S~~~~~~T~p 104 (105)
T 2haz_A 89 KGLGEISAASEFKTQP 104 (105)
T ss_dssp TEECCCCCCEEEECCC
T ss_pred CccCCCcCCEeeEEec
Confidence 3567888899976
|
| >1x5j_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.77 E-value=0.0014 Score=50.94 Aligned_cols=78 Identities=14% Similarity=0.074 Sum_probs=48.3
Q ss_pred eccCCCCCcEEEEEEcCCCCC--------CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEE
Q 040421 4 TQGDHEGKGVIVSWVTPDEPG--------SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYE 75 (407)
Q Consensus 4 ~~g~~~~~~~~v~W~t~~~~~--------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~ 75 (407)
.......+++.|+|.-..... ...|+|............ ...-...++|+||+|+|.|.++
T Consensus 16 ~~~~~s~tsi~lsW~~p~~~~~~~~~~~~~Y~v~y~~~~~~~~~~~~-----------~~~~~~~~~i~gL~P~T~Y~f~ 84 (113)
T 1x5j_A 16 QASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKN-----------ANATTLSYLVTGLKPNTLYEFS 84 (113)
T ss_dssp EEEEEETTEEEEEEECTTSCSSSCCCSSCEEEEEECBSSSSSCCCEE-----------CCBCSSEEEEESCCTTCEECCE
T ss_pred EEEEecCCEEEEEecCCCCccccccCcCceEEEEEEECCCCCeEEEE-----------EecCcCEEEeCCCCCCcEEEEE
Confidence 334445789999999764221 346778763211111000 0011235789999999999999
Q ss_pred eCc------CCceeeEEEEcCCC
Q 040421 76 VGV------GNATRQFSFTTPPG 92 (407)
Q Consensus 76 v~~------~~~s~~~~F~T~p~ 92 (407)
|.. +.+|....++|.+.
T Consensus 85 V~A~~~~G~g~~S~~v~~~T~~~ 107 (113)
T 1x5j_A 85 VMVTKGRRSSTWSMTAHGTTFEL 107 (113)
T ss_dssp EEEECSSCBCCCCCCCCEECCCS
T ss_pred EEEecCCccCCCcccEEeeccCC
Confidence 954 35777788888765
|
| >1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=96.73 E-value=0.0016 Score=60.74 Aligned_cols=70 Identities=20% Similarity=0.203 Sum_probs=40.9
Q ss_pred cEEEEEecCCCCCCchhhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhh--ccCCeEEccCCCccc
Q 040421 99 YTFGLIGDLGQTYYSNRTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNA--AYQPWIWTVGNHEID 176 (407)
Q Consensus 99 ~~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~--~~~P~~~~~GNHD~~ 176 (407)
.+++++||+|........+-+.... ...+-+|++||++.... +. .+-...+..+. ..-.++.+.||||..
T Consensus 57 ~~i~viGDIHG~~~~L~~ll~~~g~-~~~~~~vflGD~VDRG~----~s---~evl~lL~~lk~~~p~~v~~lrGNHE~~ 128 (330)
T 1fjm_A 57 APLKICGDIHGQYYDLLRLFEYGGF-PPESNYLFLGDYVDRGK----QS---LETICLLLAYKIKYPENFFLLRGNHECA 128 (330)
T ss_dssp SSEEEECBCTTCHHHHHHHHHHHCS-TTSSCEEECSCCSSSSS----CH---HHHHHHHHHHHHHSTTTEEECCCTTSSH
T ss_pred CceEEecCCCCCHHHHHHHHHHhCC-CCcceEEeCCCcCCCCC----Ch---HHHHHHHHHhhhhcCCceEEecCCchHh
Confidence 4689999999764333222222222 24577999999996532 11 12233332222 223589999999974
|
| >2db8_A Tripartite motif protein 9, isoform 2; ring finger protein 91, TRIM9, KIAA0282, RNF91, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.72 E-value=0.0023 Score=49.33 Aligned_cols=74 Identities=16% Similarity=0.283 Sum_probs=47.8
Q ss_pred CCCCcEEEEEEcCCCCC----CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc-----
Q 040421 8 HEGKGVIVSWVTPDEPG----SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV----- 78 (407)
Q Consensus 8 ~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~----- 78 (407)
...++++|.|.-..... ...|+|.......+..+. . ......+|++|+|+|.|.|||..
T Consensus 22 ~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~-~-----------~~~~~~~v~~L~p~t~Y~frV~A~n~~G 89 (110)
T 2db8_A 22 THNNSATLSWKQPPLSTVPADGYILELDDGNGGQFREVY-V-----------GKETMCTVDGLHFNSTYNARVKAFNKTG 89 (110)
T ss_dssp CSSSEEEECCBCCTTCCSCCSEEEEEECCSSSSCCEEEE-E-----------ESCSCEEEECCCSSSCCEEEEEEECSSC
T ss_pred cCCCEEEEEECCCCCCCCCccEEEEEEEeCCCCceEEEE-e-----------CCcCEEEECCCCCCCEEEEEEEEEeCCc
Confidence 35689999999875322 245777665432232211 0 01123678999999999999954
Q ss_pred -CCceeeEEEEcCCCC
Q 040421 79 -GNATRQFSFTTPPGV 93 (407)
Q Consensus 79 -~~~s~~~~F~T~p~~ 93 (407)
+.+|....|+|.+.+
T Consensus 90 ~s~~S~~~~~~T~~~p 105 (110)
T 2db8_A 90 VSPYSKTLVLQTSEGS 105 (110)
T ss_dssp BCCCCSCEECCCCCCC
T ss_pred CCCCCCCEEEEcCCCC
Confidence 246777888888754
|
| >3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=96.71 E-value=0.0024 Score=59.49 Aligned_cols=73 Identities=19% Similarity=0.118 Sum_probs=41.8
Q ss_pred CCcEEEEEecCCCCCCchhhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhh--ccCCeEEccCCCc
Q 040421 97 VPYTFGLIGDLGQTYYSNRTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNA--AYQPWIWTVGNHE 174 (407)
Q Consensus 97 ~~~~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~--~~~P~~~~~GNHD 174 (407)
...+++++||+|........+-+....+..-+.+|++||++.... .. .+-...+..+. ..-.++.+.||||
T Consensus 62 ~~~ri~viGDIHG~~~~L~~ll~~~g~~~~~~~~vflGD~VDRG~----~s---~evl~lL~~lk~~~p~~v~llrGNHE 134 (335)
T 3icf_A 62 PDVKISVCGDTHGQFYDVLNLFRKFGKVGPKHTYLFNGDFVDRGS----WS---CEVALLFYCLKILHPNNFFLNRGNHE 134 (335)
T ss_dssp TTCEEEEECCCTTCHHHHHHHHHHHCCCBTTEEEEECSCCSSSST----TH---HHHHHHHHHHHHHCTTTEEECCCTTS
T ss_pred cCceEEEEecCCCCHHHHHHHHHHcCCCCCCcEEEEeCCccCCCc----Ch---HHHHHHHHHHhhhCCCcEEEecCchh
Confidence 467999999999865433222222222112356999999996532 11 11222222222 2245899999999
Q ss_pred cc
Q 040421 175 ID 176 (407)
Q Consensus 175 ~~ 176 (407)
..
T Consensus 135 ~~ 136 (335)
T 3icf_A 135 SD 136 (335)
T ss_dssp SH
T ss_pred hh
Confidence 63
|
| >2ee2_A Contactin-1; neural cell surface protein F3, glycoprotein GP135, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.64 E-value=0.0037 Score=48.72 Aligned_cols=76 Identities=24% Similarity=0.328 Sum_probs=47.6
Q ss_pred CCCcEEEEEEcCCC--CCCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc------CC
Q 040421 9 EGKGVIVSWVTPDE--PGSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV------GN 80 (407)
Q Consensus 9 ~~~~~~v~W~t~~~--~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~------~~ 80 (407)
..++++|.|..... .....|+|............... . .....++|+||+|+|.|.++|.. +.
T Consensus 31 ~~~sv~l~W~~p~~g~i~~Y~v~~~~~~~~~~~~~~~~~---~------~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~ 101 (119)
T 2ee2_A 31 SSSEISVHWEHVLEKIVESYQIRYWAAHDKEEAANRVQV---T------SQEYSARLENLLPDTQYFIEVGACNSAGCGP 101 (119)
T ss_dssp ETTEEEEECCCCSCTTCCEEEEEEEESSSCGGGCEEEEE---E------TTCSEEEECSCCTTCEEEEEEEEECSSSCCC
T ss_pred cCCEEEEEecCCCCCccceEEEEEEECCCcccCcEEEEc---C------CCEeEEEECCCCCCCEEEEEEEEEcCCccCC
Confidence 46789999998743 22356777665432211111010 0 11235789999999999999954 34
Q ss_pred ceeeEEEEcCCCC
Q 040421 81 ATRQFSFTTPPGV 93 (407)
Q Consensus 81 ~s~~~~F~T~p~~ 93 (407)
+|....|+|.+.+
T Consensus 102 ~S~~~~~~T~~~~ 114 (119)
T 2ee2_A 102 PSDMIEAFTKKAS 114 (119)
T ss_dssp CCCCEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 6777889997654
|
| >2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A | Back alignment and structure |
|---|
Probab=96.63 E-value=0.0018 Score=60.91 Aligned_cols=73 Identities=16% Similarity=0.025 Sum_probs=42.3
Q ss_pred CCcEEEEEecCCCCCCchhhHHHhhhCC-------CCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhh-----ccC
Q 040421 97 VPYTFGLIGDLGQTYYSNRTLTHYELNP-------IKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNA-----AYQ 164 (407)
Q Consensus 97 ~~~~f~~~gD~~~~~~~~~~l~~~~~~~-------~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 164 (407)
...+++++||+|........+-+..... .++|.++++||++.... +. .+....+..+. ...
T Consensus 69 ~~~~i~vigDiHG~~~~l~~ll~~~~~~~~~~~~~~~~d~~v~lGD~vdrG~----~s---~evl~~l~~l~~~~~~~~~ 141 (342)
T 2z72_A 69 GIKKVVALSDVHGQYDVLLTLLKKQKIIDSDGNWAFGEGHMVMTGDIFDRGH----QV---NEVLWFMYQLDQQARDAGG 141 (342)
T ss_dssp CCCEEEEECCCTTCHHHHHHHHHHTTSBCTTSCBCCTTCEEEECSCCSSSSS----CH---HHHHHHHHHHHHHHHHTTC
T ss_pred CCCCEEEEECCCCCHHHHHHHHHhcCCCcccccccCCCCEEEEECCCcCCCC----CH---HHHHHHHHHHHHHHhhCCC
Confidence 4679999999996543222221111110 14789999999996432 11 12223333221 234
Q ss_pred CeEEccCCCccc
Q 040421 165 PWIWTVGNHEID 176 (407)
Q Consensus 165 P~~~~~GNHD~~ 176 (407)
+++.+.||||..
T Consensus 142 ~v~~v~GNHE~~ 153 (342)
T 2z72_A 142 MVHLLMGNHEQM 153 (342)
T ss_dssp EEEECCCHHHHH
T ss_pred eEEEEecCCcHH
Confidence 699999999974
|
| >2e7h_A Ephrin type-B receptor 4; FN3 domain, tyrosine- protein kinase receptor HTK, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.62 E-value=0.0025 Score=48.87 Aligned_cols=75 Identities=15% Similarity=0.251 Sum_probs=48.8
Q ss_pred cCCCCCcEEEEEEcCCCCC----CCEEEEeecCC-C-C-ceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 6 GDHEGKGVIVSWVTPDEPG----SNTVLYWAENS-T-L-KQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 6 g~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~-~-~-~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
.....+++.|.|.-+.... ...|+|....+ . . ...... .. ..++|++|+|+|.|.+||..
T Consensus 17 ~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~-----------~~--~~~~i~~L~p~t~Y~~~V~A 83 (109)
T 2e7h_A 17 TRSSPSSLSLAWAVPRAPSGAVLDYEVKYHEKGAEGPSSVRFLKT-----------SE--NRAELRGLKRGASYLVQVRA 83 (109)
T ss_dssp EEEETTEEEEECCCCCCSSSCCCEEEEEEEETTCCSTTTSEEEEE-----------SS--SEEEEESCCTTSCEEEEEEE
T ss_pred EecCCCEEEEEeCCCCCCCCcEeEEEEEEEECCCCCCceeEEEcc-----------CC--CEEEECCCCCCCeEEEEEEE
Confidence 3345689999998874322 34677776541 1 1 111111 01 25789999999999999954
Q ss_pred ------CCceeeEEEEcCCCC
Q 040421 79 ------GNATRQFSFTTPPGV 93 (407)
Q Consensus 79 ------~~~s~~~~F~T~p~~ 93 (407)
+.+|....|+|.+..
T Consensus 84 ~n~~G~g~~S~~~~~~T~~~~ 104 (109)
T 2e7h_A 84 RSEAGYGPFGQEHHSQTQLDS 104 (109)
T ss_dssp ECSSCBCCCCSCEECCCCCCS
T ss_pred EeCCccCCCCCCEEEEcCCCC
Confidence 356788889998754
|
| >2dle_A Receptor-type tyrosine-protein phosphatase ETA; protein-tyrosine phosphatase ETA, R-PTP-ETA, HPTP ETA, protein-tyrosine phosphatase receptor type J; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.62 E-value=0.0043 Score=47.47 Aligned_cols=76 Identities=18% Similarity=0.251 Sum_probs=47.1
Q ss_pred eeccCCCCCcEEEEEEcCCCCC----CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 3 ITQGDHEGKGVIVSWVTPDEPG----SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
|.....+.++++++|..+..+. ...|+|..... ... . . .-...++|+||+|||.|.++|..
T Consensus 14 l~v~~~t~~Sv~LsW~~p~~~~~~i~~Y~v~~~~~~~----~~~--~---~------~~~t~~~i~gL~PgT~Y~~~V~A 78 (104)
T 2dle_A 14 VTAVNISATSLTLIWKVSDNESSSNYTYKIHVAGETD----SSN--L---N------VSEPRAVIPGLRSSTFYNITVCP 78 (104)
T ss_dssp EEEEEECSSCEEEEEEESCSTTCCSCEEEEEEECSSC----EEE--E---E------ESSSEEECCSCCSSCEEEEEEEE
T ss_pred EEEEEeecCEEEEEEcCCCCCCCceEEEEEEEECCCC----eEE--E---c------CCCCEEEECCCCCCCEEEEEEEE
Confidence 4455557789999999764332 25666664321 111 0 0 11235789999999999999865
Q ss_pred --C---CceeeEEEEcCCCC
Q 040421 79 --G---NATRQFSFTTPPGV 93 (407)
Q Consensus 79 --~---~~s~~~~F~T~p~~ 93 (407)
+ ..+....++|.|.+
T Consensus 79 ~~~~~~~~p~~~~~~T~p~p 98 (104)
T 2dle_A 79 VLGDIEGTPGFLQVHTPPVP 98 (104)
T ss_dssp ESSSCCCBCEEEEEECCCCS
T ss_pred EECCcccCCeeEEEEccCCC
Confidence 2 22345577887654
|
| >2ed8_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.60 E-value=0.0093 Score=45.21 Aligned_cols=77 Identities=12% Similarity=0.125 Sum_probs=48.9
Q ss_pred eeccCCCCCcEEEEEEcCCCC----CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 3 ITQGDHEGKGVIVSWVTPDEP----GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
|.......+++.|.|...... ....|+|............. . ...++|++|+|+|.|.++|..
T Consensus 14 l~~~~~~~~si~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~--------~-----~~~~~i~~L~p~t~Y~~~V~A 80 (106)
T 2ed8_A 14 LQAVSTSPTSILITWEPPAYANGPVQGYRLFCTEVSTGKEQNIEV--------D-----GLSYKLEGLKKFTEYSLRFLA 80 (106)
T ss_dssp EEEECSSTTEEEEEEECCSSCSSCCCEEEEEEEETTTCCEEEEEE--------C-----SSCEEEESCCTTCEEEEEEEE
T ss_pred eEEEecCCCEEEEEECCCCCCCCCeeEEEEEEEECCCCceEEEeC--------C-----ccEEEECCCCCCCEEEEEEEE
Confidence 344445578999999987422 23467776655432221110 0 134678999999999999964
Q ss_pred C------CceeeEEEEcCCC
Q 040421 79 G------NATRQFSFTTPPG 92 (407)
Q Consensus 79 ~------~~s~~~~F~T~p~ 92 (407)
- .+|....|+|...
T Consensus 81 ~n~~G~g~~S~~~~~~T~~~ 100 (106)
T 2ed8_A 81 YNRYGPGVSTDDITVVTLSD 100 (106)
T ss_dssp ECSSCEEEECCCEEEECCCC
T ss_pred EeCCccCCCcCCEEEEcCCC
Confidence 2 3567778888653
|
| >1wk0_A KIAA0970 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.59 E-value=0.0033 Score=50.72 Aligned_cols=77 Identities=22% Similarity=0.277 Sum_probs=46.8
Q ss_pred ccCCCCCcEEEEEEcCCCCCC-------------CEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCE
Q 040421 5 QGDHEGKGVIVSWVTPDEPGS-------------NTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTK 71 (407)
Q Consensus 5 ~g~~~~~~~~v~W~t~~~~~~-------------~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~ 71 (407)
+....+++++|+|.-+..+.. -.|+|..+......... +. +-...++|+||+|+|.
T Consensus 26 v~~i~s~S~~LsW~~P~~~~~g~~~~~g~~~i~~Yev~~~~k~~~~~~~~~-----~~------g~~ts~~v~~L~P~T~ 94 (137)
T 1wk0_A 26 ASDIQARTVVLTWSPPSSLINGETDESSVPELYGYEVLISSTGKDGKYKSV-----YV------GEETNITLNDLKPAMD 94 (137)
T ss_dssp EESCCSSCEEEECCCCCCCSTTSSCSSCSCSCCEEEEEECSSCTTSCCEEE-----EE------ESCSEEEECSCCTTCE
T ss_pred EEEEccCEEEEEECCCCCccCccccccccCccEEEEEEEEecCCCCceEEE-----Ee------cCccEEEEcCCCCCCE
Confidence 345568999999998654311 12344333221111110 00 1124578999999999
Q ss_pred EEEEeCc------CCceeeEEEEcCCC
Q 040421 72 YYYEVGV------GNATRQFSFTTPPG 92 (407)
Q Consensus 72 Y~Y~v~~------~~~s~~~~F~T~p~ 92 (407)
|..||.. +..|....|+|++.
T Consensus 95 Y~~rV~A~n~~G~G~~S~~~~f~T~~~ 121 (137)
T 1wk0_A 95 YHAKVQAEYNSIKGTPSEAEIFTTLSC 121 (137)
T ss_dssp ECEEEEEEETTEECCCCCCCCEECCCS
T ss_pred EEEEEEEEeCCCcCCCCCCEEEECCCC
Confidence 9999954 34677788999864
|
| >1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 | Back alignment and structure |
|---|
Probab=96.55 E-value=0.0033 Score=62.01 Aligned_cols=72 Identities=17% Similarity=0.104 Sum_probs=41.2
Q ss_pred CcEEEEEecCCCCCCchhhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhh--hccCCeEEccCCCcc
Q 040421 98 PYTFGLIGDLGQTYYSNRTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERN--AAYQPWIWTVGNHEI 175 (407)
Q Consensus 98 ~~~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~--~~~~P~~~~~GNHD~ 175 (407)
..+++++||+|........+-+....+...+.+|++||++.... . . .+-...+..+ .....++.++||||.
T Consensus 212 ~~~~~vigDiHG~~~~l~~~l~~~~~~~~~~~~v~lGD~vdrG~----~--s-~e~~~~l~~l~~~~~~~~~~lrGNHE~ 284 (477)
T 1wao_1 212 TEKITVCGDTHGQFYDLLNIFELNGLPSETNPYIFNGDFVDRGS----F--S-VEVILTLFGFKLLYPDHFHLLRGNHET 284 (477)
T ss_dssp SCEEEEECBCTTCHHHHHHHHHHHCCCBTTBCEEEESCCSSSST----T--H-HHHHHHHHHHHHHSTTTEEEECCTTSS
T ss_pred CcceEEEeCCCCCHHHHHHHHHHcCCCCCcCeEEEeccccCCCc----c--h-HHHHHHHHHHHhhCCCceEeecCCccH
Confidence 57999999999764332222222222213356999999996432 1 1 1112222221 224579999999996
Q ss_pred c
Q 040421 176 D 176 (407)
Q Consensus 176 ~ 176 (407)
.
T Consensus 285 ~ 285 (477)
T 1wao_1 285 D 285 (477)
T ss_dssp H
T ss_pred H
Confidence 3
|
| >2dkm_A Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.54 E-value=0.0048 Score=46.98 Aligned_cols=81 Identities=15% Similarity=0.143 Sum_probs=47.9
Q ss_pred eeccCCCCCcEEEEEEcCCCCCCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCcC---
Q 040421 3 ITQGDHEGKGVIVSWVTPDEPGSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGVG--- 79 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~~--- 79 (407)
|.......+++.|.|.-+.......|+|.......+.... .. .. ... .++|+||+|+|.|.++|..-
T Consensus 15 l~~~~~~~~sv~lsW~~p~~~~~Y~v~y~~~~~~~~~~~~-~~-~~-----~~~---~~~l~~L~p~t~Y~~~V~A~~~~ 84 (104)
T 2dkm_A 15 LTLAAVTPRTVHLTWQPSAGATHYLVRCSPASPKGEEEER-EV-QV-----GRP---EVLLDGLEPGRDYEVSVQSLRGP 84 (104)
T ss_dssp CEEEEECSSEEEEECCCCSSCSEEEEEEEESSSCCSSCCE-EE-EE-----SSS---EEEEESCCTTCCEEEEEEEECSS
T ss_pred eEEEecCCCEEEEEEeCCCCCCeEEEEEEECCCCCCcceE-EE-ec-----CCC---EEEECCCCCCCEEEEEEEEECCC
Confidence 3444456789999997765443456777765432111000 00 00 111 68999999999999999652
Q ss_pred Cce--eeEEEEcCCCC
Q 040421 80 NAT--RQFSFTTPPGV 93 (407)
Q Consensus 80 ~~s--~~~~F~T~p~~ 93 (407)
+.| ....++|.|..
T Consensus 85 ~~s~p~~~~~~T~p~~ 100 (104)
T 2dkm_A 85 EGSEARGIRARTPTSG 100 (104)
T ss_dssp SBCCCEEEECCCCCCS
T ss_pred CCCCCEEEEEEcCCCC
Confidence 222 34467777654
|
| >2crz_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.53 E-value=0.0084 Score=45.88 Aligned_cols=75 Identities=17% Similarity=0.263 Sum_probs=47.6
Q ss_pred CCCCCcEEEEEEcCCC-C----CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc---
Q 040421 7 DHEGKGVIVSWVTPDE-P----GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV--- 78 (407)
Q Consensus 7 ~~~~~~~~v~W~t~~~-~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~--- 78 (407)
....++++|.|..+.. . ....|+|.......+..+. . .....++|++|+|++.|.+||..
T Consensus 20 ~~~~~sv~l~W~~P~~~~~~~i~~Y~v~~~~~~~~~~~~~~-~-----------~~~~~~~v~~L~p~t~Y~frV~A~n~ 87 (110)
T 2crz_A 20 RPKAKEIQLRWGPPLVDGGSPISCYSVEMSPIEKDEPREVY-Q-----------GSEVECTVSSLLPGKTYSFRLRAANK 87 (110)
T ss_dssp CCCSSEEEEECCCCSCCTTSCCCEEEEEEECTTSCCCEEEE-E-----------ESCSEEEEESCCTTCEEEECCEEECS
T ss_pred ccCCCEEEEEeCCCCCCCCceeEEEEEEEEeCCCCceEEEE-e-----------CCcEEEEECCcCCCCEEEEEEEEEcC
Confidence 3456799999976532 1 2356777765443333221 1 01234678999999999999954
Q ss_pred ---CCceeeEEEEcCCCC
Q 040421 79 ---GNATRQFSFTTPPGV 93 (407)
Q Consensus 79 ---~~~s~~~~F~T~p~~ 93 (407)
+.+|....++|.+.+
T Consensus 88 ~G~g~~S~~~~~~T~~~~ 105 (110)
T 2crz_A 88 MGFGPFSEKCDITTAPGS 105 (110)
T ss_dssp SCBCCCCCCEEEECCCSC
T ss_pred CccCCCCCccccccCCCC
Confidence 346777788887643
|
| >2ed7_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.52 E-value=0.006 Score=47.28 Aligned_cols=76 Identities=22% Similarity=0.325 Sum_probs=47.3
Q ss_pred CCCCCcEEEEEEcCCCCCC----CEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc----
Q 040421 7 DHEGKGVIVSWVTPDEPGS----NTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV---- 78 (407)
Q Consensus 7 ~~~~~~~~v~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~---- 78 (407)
....+++.|.|.-...... ..|+|............ . ...-...++|++|+|+|.|.+||..
T Consensus 28 ~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~----~------~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~ 97 (119)
T 2ed7_A 28 LVSSRFVRLSWRPPAEAKGNIQTFTVFFSREGDNRERALN----T------TQPGSLQLTVGNLKPEAMYTFRVVAYNEW 97 (119)
T ss_dssp EECSSCEEEECCCCSCCSSCEEEEEEEEEESSCCCCEEEE----C------CCTTCCEEEECSCCSSSEEEECCEEEESS
T ss_pred ecCCCEEEEEEeCCCCCCCcEEEEEEEEEeCCCCcceeeE----e------ecCCceEEEeCCCCCCCEEEEEEEEEcCC
Confidence 3356789999987643222 35566655433222110 0 0111345789999999999999954
Q ss_pred --CCceeeEEEEcCCC
Q 040421 79 --GNATRQFSFTTPPG 92 (407)
Q Consensus 79 --~~~s~~~~F~T~p~ 92 (407)
+.+|....++|.+.
T Consensus 98 G~g~~S~~~~~~T~~~ 113 (119)
T 2ed7_A 98 GPGESSQPIKVATQPE 113 (119)
T ss_dssp CBCSCCCCEEEECCCC
T ss_pred ccCCCcCCEEEEeCCC
Confidence 24677888888764
|
| >1x5z_A Receptor-type tyrosine-protein phosphatase delta; fibronectin type III domain containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.48 E-value=0.0047 Score=47.58 Aligned_cols=79 Identities=14% Similarity=0.268 Sum_probs=49.5
Q ss_pred eeccCCCCCcEEEEEEcCCCC--CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCcC-
Q 040421 3 ITQGDHEGKGVIVSWVTPDEP--GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGVG- 79 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~--~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~~- 79 (407)
|.......+++.|.|...... ....|+|............. .. ...++|++|+|+|.|.+||..-
T Consensus 24 l~~~~~~~~sv~l~W~~p~~~~i~~Y~v~~~~~~~~~~~~~~~----------~~--~~~~~i~~L~p~t~Y~~~V~A~n 91 (115)
T 1x5z_A 24 FKAEPESETSILLSWTPPRSDTIANYELVYKDGEHGEEQRITI----------EP--GTSYRLQGLKPNSLYYFRLAARS 91 (115)
T ss_dssp EEEECSSSSEEEEEEECCSCCCCCEEEECBEESSSCCCBCCEE----------CS--SSEEEEECCCTTCEEEECEEEEC
T ss_pred CEeeeCCCCEEEEEEcCCCCCCccEEEEEEEeCCCCCceEEec----------CC--CcEEEECCCCCCCeEEEEEEEEC
Confidence 444555678999999987432 23456666544322211110 01 1357889999999999999642
Q ss_pred -----CceeeEEEEcCCCC
Q 040421 80 -----NATRQFSFTTPPGV 93 (407)
Q Consensus 80 -----~~s~~~~F~T~p~~ 93 (407)
.+|....|+|.+..
T Consensus 92 ~~G~g~~S~~~~~~T~~~~ 110 (115)
T 1x5z_A 92 PQGLGASTAEISARTMQSS 110 (115)
T ss_dssp SSCEEEECCCEEEECCCCC
T ss_pred CCcccCCCcCEEEecCCCC
Confidence 35677889987653
|
| >3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} SCOP: d.159.1.3 PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3v4y_A* 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A* | Back alignment and structure |
|---|
Probab=96.47 E-value=0.0029 Score=58.03 Aligned_cols=69 Identities=22% Similarity=0.266 Sum_probs=40.2
Q ss_pred EEEEEecCCCCCCchhhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhh--ccCCeEEccCCCccc
Q 040421 100 TFGLIGDLGQTYYSNRTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNA--AYQPWIWTVGNHEID 176 (407)
Q Consensus 100 ~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~--~~~P~~~~~GNHD~~ 176 (407)
+++++||+|........+-+....+ ..+-+|++||++.... .. .+-...+..+. ....++.+.||||..
T Consensus 57 ~i~viGDIHG~~~~L~~ll~~~g~~-~~~~~vfLGD~VDrG~----~s---~evl~lL~~lk~~~p~~v~~lrGNHE~~ 127 (299)
T 3e7a_A 57 PLKICGDIHGQYYDLLRLFEYGGFP-PESNYLFLGDYVDRGK----QS---LETICLLLAYKIKYPENFFLLRGNHECA 127 (299)
T ss_dssp SEEEECBCTTCHHHHHHHHHHHCST-TSSCEEECSCCSSSSS----CH---HHHHHHHHHHHHHSTTTEEECCCTTSSH
T ss_pred CEEEEecCCCCHHHHHHHHHHhCCC-CCccEEeCCcccCCCC----Cc---HHHHHHHHHHHhhCCCcEEEEecCchhh
Confidence 6899999998753332222222222 4577899999996532 11 11222222222 223589999999974
|
| >1x5g_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.46 E-value=0.0039 Score=48.18 Aligned_cols=71 Identities=23% Similarity=0.331 Sum_probs=46.5
Q ss_pred CCCcEEEEEEcCCCC----CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc------
Q 040421 9 EGKGVIVSWVTPDEP----GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV------ 78 (407)
Q Consensus 9 ~~~~~~v~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~------ 78 (407)
..+++.|.|...... ....|+|..........+.. ....++|++|+|+|.|.++|..
T Consensus 30 ~~~si~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~-------------~~~~~~i~~L~p~t~Y~~~V~A~n~~G~ 96 (116)
T 1x5g_A 30 SPTSITVTWETPVSGNGEIQNYKLYYMEKGTDKEQDVDV-------------SSHSYTINGLKKYTEYSFRVVAYNKHGP 96 (116)
T ss_dssp ETTEEEEECCCCSCCSSCCSEEEEEEEETTCCCCCCEEE-------------CSSEEEECSCCTTCEEEEEEEEECSSCC
T ss_pred CCCEEEEEEeCCCCCCCcccEEEEEEEECCCCccEEEec-------------CCceEEEcCCCCCCEEEEEEEEEcCCCc
Confidence 467899999886422 23467777665433322211 1235788999999999999954
Q ss_pred CCceeeEEEEcCCC
Q 040421 79 GNATRQFSFTTPPG 92 (407)
Q Consensus 79 ~~~s~~~~F~T~p~ 92 (407)
+.+|....|+|.+.
T Consensus 97 g~~S~~~~~~T~~~ 110 (116)
T 1x5g_A 97 GVSTPDVAVRTLSD 110 (116)
T ss_dssp CCBCCCCCEECCCS
T ss_pred CCCCCCEEEECCCC
Confidence 24677778888754
|
| >3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A | Back alignment and structure |
|---|
Probab=96.41 E-value=0.0034 Score=58.77 Aligned_cols=70 Identities=16% Similarity=0.107 Sum_probs=41.1
Q ss_pred cEEEEEecCCCCCCchhhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhh--ccCCeEEccCCCccc
Q 040421 99 YTFGLIGDLGQTYYSNRTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNA--AYQPWIWTVGNHEID 176 (407)
Q Consensus 99 ~~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~--~~~P~~~~~GNHD~~ 176 (407)
.+++++||+|........+-+.... ...+-+|++||++.... .. .+-...+..+. ..-.++.+.||||..
T Consensus 70 ~pi~ViGDIHG~~~dL~~ll~~~g~-~~~~~~vfLGD~VDRG~----~s---~Evl~lL~~lk~~~p~~v~llrGNHE~~ 141 (357)
T 3ll8_A 70 APVTVCGDIHGQFFDLMKLFEVGGS-PANTRYLFLGDYVDRGY----FS---IECVLYLWALKILYPKTLFLLRGNHECR 141 (357)
T ss_dssp SSEEEECCCTTCHHHHHHHHHHHCC-TTTCCEEECSCCSSSST----TH---HHHHHHHHHHHHHCTTTEEECCCTTSSH
T ss_pred ccceeeccCCCCHHHHHHHHHhcCC-CCCcEEEECCCccCCCc----Ch---HHHHHHHHHhhhhcCCcEEEEeCchhhh
Confidence 3689999999875333322222233 25678999999996532 11 11122222222 223589999999974
|
| >1x5x_A Fibronectin type-III domain containing protein 3A; structural genomics, KIAA0970, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.40 E-value=0.0086 Score=45.72 Aligned_cols=74 Identities=22% Similarity=0.156 Sum_probs=45.9
Q ss_pred CCCCcEEEEEEcCCCC-----CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCcC---
Q 040421 8 HEGKGVIVSWVTPDEP-----GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGVG--- 79 (407)
Q Consensus 8 ~~~~~~~v~W~t~~~~-----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~~--- 79 (407)
...++++|.|...... ....|+|.............. .....++|++|+|+|.|.|||..-
T Consensus 19 ~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~-----------~~~~~~~v~~L~p~t~Y~frV~A~n~~ 87 (109)
T 1x5x_A 19 AGITWLSLQWSKPSGTPSDEGISYILEMEEETSGYGFKPKYD-----------GEDLAYTVKNLRRSTKYKFKVIAYNSE 87 (109)
T ss_dssp ECSSEEEEECCCCSSCCSSSSCEEEEEECCSSSSCCCEEEEE-----------ESCSEEEEESCCSSCEEEEEEEEECSS
T ss_pred ccCCEEEEEEcCCCCCCCCcccEEEEEEecCCCCcceEEeEe-----------CCccEEEECCCCCCCEEEEEEEEEeCC
Confidence 3568999999876432 224666766543211111111 012246789999999999999652
Q ss_pred ---CceeeEEEEcCCC
Q 040421 80 ---NATRQFSFTTPPG 92 (407)
Q Consensus 80 ---~~s~~~~F~T~p~ 92 (407)
.+|....++|.+.
T Consensus 88 G~s~~S~~~~~~T~~~ 103 (109)
T 1x5x_A 88 GKSNPSEVVEFTTCPD 103 (109)
T ss_dssp CEEEECCCEEEECCCC
T ss_pred CCcCCccCEEeEeCCC
Confidence 3566778888764
|
| >2rb8_A Tenascin; beta sheet,loop design, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix, glycoprotein; 1.45A {Homo sapiens} PDB: 2rbl_A 1ten_A | Back alignment and structure |
|---|
Probab=96.35 E-value=0.03 Score=42.43 Aligned_cols=80 Identities=18% Similarity=0.280 Sum_probs=47.6
Q ss_pred eeccCCCCCcEEEEEEcCCCC-CCCEEEEeecCCC-CceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCcC-
Q 040421 3 ITQGDHEGKGVIVSWVTPDEP-GSNTVLYWAENST-LKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGVG- 79 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~~- 79 (407)
|.+.+.+.+++.|.|.-+... ..-.|.|...... ...... .. .-...++|+||+|||.|.++|..-
T Consensus 9 l~v~~~t~~sv~lsW~~p~~~i~~Y~v~y~~~~~~~~~~~~~-----v~------~~~~~~~l~~L~p~t~Y~~~V~A~~ 77 (104)
T 2rb8_A 9 IEVKDVTDTTALITWMPPSQPVDGFELTYGIKDVPGDRTTID-----LT------EDENQYSIGNLKPDTEYEVSLISRR 77 (104)
T ss_dssp EEEESCCSSCEEEEEECCSSCCSEEEEEEEETTCTTCCEEEE-----EE------TTCCEEEECSCCTTCEEEEEEEEEE
T ss_pred cEEEEecCCeEEEEEcCCCCccceEEEEEEECcCCCceEEEE-----cC------CCcCEEEeCCCCCCCEEEEEEEEEe
Confidence 555566788999999876422 2346778765421 121111 11 112346899999999999999642
Q ss_pred ----CceeeEEEEcCCCC
Q 040421 80 ----NATRQFSFTTPPGV 93 (407)
Q Consensus 80 ----~~s~~~~F~T~p~~ 93 (407)
.......|+|.+..
T Consensus 78 ~~g~s~p~~~~~~T~~~~ 95 (104)
T 2rb8_A 78 GDMSSNPAKETFTTGLAA 95 (104)
T ss_dssp TTEECCCEEEEEECCC--
T ss_pred CCccCCCEEEEEECCCCc
Confidence 12234578887653
|
| >1wfo_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.34 E-value=0.0056 Score=48.38 Aligned_cols=77 Identities=14% Similarity=0.227 Sum_probs=47.1
Q ss_pred CCCCcEEEEEEcCCCCC----CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCcC----
Q 040421 8 HEGKGVIVSWVTPDEPG----SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGVG---- 79 (407)
Q Consensus 8 ~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~~---- 79 (407)
...+++.|.|..+.... ...|+|............ . .. ......++|++|+|+|.|.++|..-
T Consensus 39 ~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~-~--~~------~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G 109 (130)
T 1wfo_A 39 VRTTSVRLIWQPPAAPNGIILAYQITHRLNTTTANTATV-E--VL------APSARQYTATGLKPESVYLFRITAQTRKG 109 (130)
T ss_dssp ECSSEEEEECCCCSCCCSCCCEEEEEEEESSCCCSCCCE-E--EE------CTTCCEEEEESCCSSSEEEEEEEEECSSC
T ss_pred cCCCEEEEEEcCCCCCCCceEEEEEEEEECCCCCceEEE-E--Ee------CCCceEEEEcCCCCCCEEEEEEEEEeCCc
Confidence 35678999998764322 346677665432111000 0 00 1123457889999999999999642
Q ss_pred --CceeeEEEEcCCCC
Q 040421 80 --NATRQFSFTTPPGV 93 (407)
Q Consensus 80 --~~s~~~~F~T~p~~ 93 (407)
.+|....|+|.+..
T Consensus 110 ~g~~S~~~~~~T~~~~ 125 (130)
T 1wfo_A 110 WGEAAEALVVTTEKRS 125 (130)
T ss_dssp EEEEEEEEEECCSSCC
T ss_pred CCCCcccEEEecCCCC
Confidence 35677788887643
|
| >3n1f_C Cell adhesion molecule-related/DOWN-regulated BY; binding sites, calcium, cell adhesion molecules, cell cycle cell LINE, conserved sequence; 1.60A {Homo sapiens} SCOP: b.1.2.1 PDB: 3d1m_C 3n1q_C 3n1m_C 3n1g_C 3n1p_C | Back alignment and structure |
|---|
Probab=96.33 E-value=0.019 Score=43.43 Aligned_cols=73 Identities=12% Similarity=0.166 Sum_probs=45.1
Q ss_pred cCCCCCcEEEEEEcCCC------CCCCEEEEeecCCCC---ceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEe
Q 040421 6 GDHEGKGVIVSWVTPDE------PGSNTVLYWAENSTL---KQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEV 76 (407)
Q Consensus 6 g~~~~~~~~v~W~t~~~------~~~~~v~y~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v 76 (407)
....++++.|.|..+.. ...-.|.|....... .... . +. . . ...++|.+|+|+|.|..+|
T Consensus 14 ~~~s~tsi~v~W~~p~~~~~ng~i~gY~v~y~~~~~~~~~~~~~~--~---v~--~--~--~~~~~l~~L~p~t~Y~v~V 82 (102)
T 3n1f_C 14 EAVSDTQIMLKWTYIPSSNNNTPIQGFYIYYRPTDSDNDSDYKRD--V---VE--G--S--KQWHMIGHLQPETSYDIKM 82 (102)
T ss_dssp EECSSSCEEEEEECCC-----CCCCEEEEEEEETTCCCGGGCEEE--E---EE--T--T--CSEEEECSCCTTCEEEEEE
T ss_pred EEcCCCEEEEEeECCChhhcCCccceEEEEEEECCCCCCCceEEE--E---Ec--C--C--ceEEECCCCCCCCEEEEEE
Confidence 34457899999998642 112468888765421 1111 1 11 1 1 1236899999999999998
Q ss_pred Cc------CCceeeEEEEc
Q 040421 77 GV------GNATRQFSFTT 89 (407)
Q Consensus 77 ~~------~~~s~~~~F~T 89 (407)
.. +..|....++|
T Consensus 83 ~A~n~~G~G~~S~~~~~~T 101 (102)
T 3n1f_C 83 QCFNEGGESEFSNVMICET 101 (102)
T ss_dssp EEEETTEECCCCCCEEEEC
T ss_pred EEECCCcCCCCCCCEEeec
Confidence 53 34566667776
|
| >1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3 | Back alignment and structure |
|---|
Probab=96.32 E-value=0.0038 Score=61.06 Aligned_cols=70 Identities=17% Similarity=0.162 Sum_probs=41.2
Q ss_pred cEEEEEecCCCCCCchhhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhc--cCCeEEccCCCccc
Q 040421 99 YTFGLIGDLGQTYYSNRTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAA--YQPWIWTVGNHEID 176 (407)
Q Consensus 99 ~~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~--~~P~~~~~GNHD~~ 176 (407)
.+++++||+|........+-++...+ ..+-+|++||++.... .. .+-...+..+.. .-.++.+.||||..
T Consensus 83 ~pI~VIGDIHGq~~dL~~LL~~~g~p-~~d~yVFLGDyVDRGp----~S---~Evl~lL~aLk~~~P~~v~lLRGNHE~~ 154 (521)
T 1aui_A 83 APVTVCGDIHGQFFDLMKLFEVGGSP-ANTRYLFLGDYVDRGY----FS---IECVLYLWALKILYPKTLFLLRGNHECR 154 (521)
T ss_dssp SSEEEECCCTTCHHHHHHHHHHHCCT-TTCCEEECSCCSSSSS----CH---HHHHHHHHHHHHHSTTTEEECCCTTSSH
T ss_pred cceeeccCCCCCHHHHHHHHHhcCCC-CcceEEEcCCcCCCCC----CH---HHHHHHHHHHhhhCCCeEEEecCCccHH
Confidence 46899999997654333332233332 4588999999996532 11 112222222221 23489999999974
|
| >2kbg_A N-CAM 2, neural cell adhesion molecule 2; fibronectin type III module, beta-sheet sandwich, cell membrane, glycoprotein, immunoglobulin domain; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.30 E-value=0.0097 Score=46.29 Aligned_cols=75 Identities=20% Similarity=0.339 Sum_probs=46.6
Q ss_pred CCCcEEEEEEcCCCCC----CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCcC---Cc
Q 040421 9 EGKGVIVSWVTPDEPG----SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGVG---NA 81 (407)
Q Consensus 9 ~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~~---~~ 81 (407)
+.++++|.|......+ ...|+|.......+..... . . .....++|.+|+|++.|.+||..- +.
T Consensus 20 ~~~sv~L~W~p~~dggsPI~~Y~I~yr~~~~~~w~~~~~-~---~------~~~~~~~l~~L~p~t~Y~frV~A~N~~G~ 89 (114)
T 2kbg_A 20 SGKSFKLSITKQDDGGAPILEYIVKYRSKDKEDQWLEKK-V---Q------GNKDHIILEHLQWTMGYEVQITAANRLGY 89 (114)
T ss_dssp STTCEEEEECCCCCSSSCCSEEEEEEEESSCCSCCEEEE-E---E------TTTCCEEECCCCTTCCEEEEEEEECTTSC
T ss_pred CCCEEEEEEECCCCCCCcccEEEEEEEeCCCCCcEEeEE-c---C------CCcCEEEEcCCCCCCEEEEEEEEEeCCcC
Confidence 5789999997643222 2478888875433332211 1 1 111246799999999999999652 22
Q ss_pred --eeeEEEEcCCCC
Q 040421 82 --TRQFSFTTPPGV 93 (407)
Q Consensus 82 --s~~~~F~T~p~~ 93 (407)
.....|+|.+.+
T Consensus 90 s~pS~~~~~T~~~~ 103 (114)
T 2kbg_A 90 SEPTVYEFSMPPKP 103 (114)
T ss_dssp EEEEEEEECCCCCC
T ss_pred cCCcCCEEEcCCCC
Confidence 234578887653
|
| >2dju_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.27 E-value=0.009 Score=45.11 Aligned_cols=76 Identities=16% Similarity=0.206 Sum_probs=47.1
Q ss_pred ccCCCCCcEEEEEEcCCC--CCCCEEEEeecCCC-CceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc---
Q 040421 5 QGDHEGKGVIVSWVTPDE--PGSNTVLYWAENST-LKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV--- 78 (407)
Q Consensus 5 ~g~~~~~~~~v~W~t~~~--~~~~~v~y~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~--- 78 (407)
......++++|.|..... .....|+|...... .+..+.. .....++|++|+|++.|.+||..
T Consensus 16 ~~~~~~~sv~l~W~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~------------~~~~~~~i~~L~p~t~Y~~~V~A~n~ 83 (106)
T 2dju_A 16 VTETTATSVTLTWDSGNSEPVTYYGIQYRAAGTEGPFQEVDG------------VATTRYSIGGLSPFSEYAFRVLAVNS 83 (106)
T ss_dssp EEEEETTEEEEEEECCCSSCCSEEEEEEEETTCCSCCCCBCC------------CCSSEEEEESCCTTCEEEEEEEEECS
T ss_pred EEeccCCEEEEEEcCCCCCCceEEEEEEEECCCCCCeEEccC------------CCccEEEEeCCCCCcEEEEEEEEEeC
Confidence 333356799999997631 12356777665432 1211110 11224678999999999999964
Q ss_pred ---CCceeeEEEEcCCC
Q 040421 79 ---GNATRQFSFTTPPG 92 (407)
Q Consensus 79 ---~~~s~~~~F~T~p~ 92 (407)
+.+|....++|.+.
T Consensus 84 ~G~~~~S~~~~~~T~~~ 100 (106)
T 2dju_A 84 IGRGPPSEAVRARTGEQ 100 (106)
T ss_dssp SCBCCCCCCEEEECCCS
T ss_pred CccCCCcccEEeEcCCC
Confidence 24567778888764
|
| >2ee3_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.21 E-value=0.026 Score=43.28 Aligned_cols=81 Identities=17% Similarity=0.135 Sum_probs=50.1
Q ss_pred eeeccCCCCCcEEEEEEcCCC-CCCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc--
Q 040421 2 HITQGDHEGKGVIVSWVTPDE-PGSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV-- 78 (407)
Q Consensus 2 ~l~~g~~~~~~~~v~W~t~~~-~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~-- 78 (407)
.|.+.+.+++++.|+|.-... ...-.|+|....+.....+... .-...+.|++|+|+|.|..+|..
T Consensus 13 ~l~~~~vt~tsi~vsW~pp~~~i~~Y~I~y~~~~~~~~~~~~v~-----------~~~t~~~l~~L~p~T~Y~v~V~A~~ 81 (108)
T 2ee3_A 13 HLGFSDVSHDAARVFWEGAPRPVRLVRVTYVSSEGGHSGQTEAP-----------GNATSAMLGPLSSSTTYTVRVTCLY 81 (108)
T ss_dssp CEEEESCCSSCEEEEESCCSSCCSEEEEEEEETTTCCBCCEEEE-----------TTCCEEEECSCCSSCEEEEEEEEEC
T ss_pred eEEEEEccCCeEEEEeeCCCCCccEEEEEEEeCCCCceeEEEcC-----------CCcCEEEcCCCCCCCEEEEEEEEEe
Confidence 356667788999999987542 2345788887654222111100 01235789999999999999954
Q ss_pred -CCce--eeEEEEcCCCC
Q 040421 79 -GNAT--RQFSFTTPPGV 93 (407)
Q Consensus 79 -~~~s--~~~~F~T~p~~ 93 (407)
.+.+ -...|+|.+.+
T Consensus 82 ~~g~s~p~~~~~~T~~vP 99 (108)
T 2ee3_A 82 PGGGSSTLTGRVTTKKAP 99 (108)
T ss_dssp TTSCEEEEEEEEECCCCC
T ss_pred CCCcCCCccCEEEeCCCC
Confidence 1222 23368887433
|
| >1wfu_A Unnamed protein product; FN3 domain, similar to 1700007B22RIK protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.19 E-value=0.009 Score=46.96 Aligned_cols=76 Identities=14% Similarity=0.132 Sum_probs=45.4
Q ss_pred ccCCCCCcEEEEEEcCCCCC----CC-EEEEeec---CC-CCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEE
Q 040421 5 QGDHEGKGVIVSWVTPDEPG----SN-TVLYWAE---NS-TLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYE 75 (407)
Q Consensus 5 ~g~~~~~~~~v~W~t~~~~~----~~-~v~y~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~ 75 (407)
..+.+.++++|.|.-+...+ .. ...|-.. .. ..+..+. . .....++|++|+|+|.|.+|
T Consensus 24 v~~vt~~Sv~LsW~~p~~~g~~~g~~~I~~Y~ve~~~~~~~~~~~v~------~------~~~t~~~v~gL~p~t~Y~fr 91 (120)
T 1wfu_A 24 VGKVTHHSIELYWDLEQKEKRQGPQEQWLRFSIEEEDPKMHSYGVIY------T------GYATRHVVEGLEPRTLYKFR 91 (120)
T ss_dssp CCCEETTEEEEECTTTSCSCCCSCGGGCCEEEEEEECTTTCCEEEEE------E------ESCSEEEEESCCTTCEEEEE
T ss_pred eceEECCEEEEEECCCccCCccCCCCceEEEEEEEecCCCCceEEEe------c------CCccEEEECCCCCCCEEEEE
Confidence 34456789999998875322 22 3344332 11 1111111 0 01123789999999999999
Q ss_pred eCcC------CceeeEEEEcCCC
Q 040421 76 VGVG------NATRQFSFTTPPG 92 (407)
Q Consensus 76 v~~~------~~s~~~~F~T~p~ 92 (407)
|..- .+|+...++|.+.
T Consensus 92 V~A~n~~G~s~~S~~~~~~T~~~ 114 (120)
T 1wfu_A 92 LKVTSPSGEYEYSPVVSVATTRE 114 (120)
T ss_dssp EEEECSSSCEEECCCEEEECCCC
T ss_pred EEEECCCCCCCCCccEeeEcCCC
Confidence 9652 3567788898764
|
| >3b83_A Ten-D3; beta sheet, computational redesigned protein, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.19 E-value=0.037 Score=41.53 Aligned_cols=66 Identities=20% Similarity=0.251 Sum_probs=42.2
Q ss_pred eeccCCCCCcEEEEEEcCCCC-CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 3 ITQGDHEGKGVIVSWVTPDEP-GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
|.+...+.+++.|.|.-+... ....|+|............ . . ..-...++|+||+|+|.|.++|..
T Consensus 8 l~~~~~~~~sv~lsW~pP~~~i~~Y~v~y~~~~~~~~~~~~-~---~------~~~~t~~~i~~L~p~t~Y~~~V~A 74 (100)
T 3b83_A 8 IKVTNITLTTAVVTWQPPILPIEGILVTFGRKNDPSDETTV-D---L------TSSITSLTLTNLEPNTTYEIRIVA 74 (100)
T ss_dssp EEEESCCSSCEEEEEECCSSCCSEEEEEEEESSCTTTCEEE-E---E------CTTEEEEEECSCCTTCEEEEEEEE
T ss_pred cEEEEecCCEEEEEEcCCcccCCEEEEEEEECCCCCCceEE-E---E------CCcceEEEECCCCCCCEEEEEEEE
Confidence 555566788999999876432 2356778765432211110 0 0 112346789999999999999965
|
| >2cui_A Tenascin-X; fibronectin type III domain, extracellular matirx, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.14 E-value=0.0098 Score=46.11 Aligned_cols=83 Identities=16% Similarity=0.136 Sum_probs=50.9
Q ss_pred eeeccCCCCCcEEEEEEcCCCC-CCCEEEEeecCCC-------CceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEE
Q 040421 2 HITQGDHEGKGVIVSWVTPDEP-GSNTVLYWAENST-------LKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYY 73 (407)
Q Consensus 2 ~l~~g~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~ 73 (407)
+|.+.+.+.++++|.|...... ....|+|...... ......-. .. .-...++|+||+|+|.|.
T Consensus 14 ~L~v~~~T~~Si~LsW~~p~g~v~~Y~i~y~~~~~~~~e~~~~~~~~~~~~---v~------~~~t~~~l~gL~PgT~Y~ 84 (112)
T 2cui_A 14 QLSVTDVTTSSLRLNWEAPPGAFDSFLLRFGVPSPSTLEPHPRPLLQRELM---VP------GTRHSAVLRDLRSGTLYS 84 (112)
T ss_dssp CCEEESCCSSCEEEECCCCTTSCSEEEEEEECCCCSSSCCCSSCCCCEEEE---EE------TTCCEEEECSCCTTCEEE
T ss_pred ceEEEeecCCeEEEEECCCCCCccEEEEEEEeCCCCccccccccCcceEEE---cC------CCcCEEEeCCCCCCCEEE
Confidence 4667777889999999976432 3567888775432 00000001 11 112368999999999999
Q ss_pred EEeCc---CCce--eeEEEEcCCCC
Q 040421 74 YEVGV---GNAT--RQFSFTTPPGV 93 (407)
Q Consensus 74 Y~v~~---~~~s--~~~~F~T~p~~ 93 (407)
.+|.. +..+ -....+|.+.+
T Consensus 85 ~~V~A~~~~~~s~p~~~~~~T~~~~ 109 (112)
T 2cui_A 85 LTLYGLRGPHKADSIQGTARTLSGP 109 (112)
T ss_dssp EEEEEECSSSEEEEEEEEEECCCCS
T ss_pred EEEEEEECCcccCCEEEEEEECCCC
Confidence 98854 2233 34467777643
|
| >1ujt_A KIAA1568 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=96.09 E-value=0.028 Score=44.10 Aligned_cols=76 Identities=16% Similarity=0.177 Sum_probs=48.6
Q ss_pred CCCCCcEEEEEEcCCCCC---CCEEEEeecCC----CCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc-
Q 040421 7 DHEGKGVIVSWVTPDEPG---SNTVLYWAENS----TLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV- 78 (407)
Q Consensus 7 ~~~~~~~~v~W~t~~~~~---~~~v~y~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~- 78 (407)
...++++.|+|..+...+ .-.|.|++.+. ...... .+ ...-...++|+||+|+|.|..+|..
T Consensus 26 a~sstsi~vsW~~~~~~g~i~gY~V~Y~~~~~~~~~~~~~~~--~v--------~~~~~~~~~l~~L~p~T~Y~~~V~A~ 95 (120)
T 1ujt_A 26 VLTPTTVQVTWTVDRQPQFIQGYRVMYRQTSGLQATSSWQNL--DA--------KVPTERSAVLVNLKKGVTYEIKVRPY 95 (120)
T ss_dssp CCBTTEEEEEEEESSCCSSCCEEEEEEEESSSSSTTTCCEEE--EC--------CCTTCCEEEEESCCSSEEEEEEEEEE
T ss_pred EccCceEEEEEccCCCCCcEeeEEEEEEECCCCCCCCccEEE--Ee--------cCCCcCEEEECCCCCCCEEEEEEEEE
Confidence 345789999999642211 24788887654 111111 10 0112346789999999999999943
Q ss_pred -----CCceeeEEEEcCCC
Q 040421 79 -----GNATRQFSFTTPPG 92 (407)
Q Consensus 79 -----~~~s~~~~F~T~p~ 92 (407)
+..|....|+|+..
T Consensus 96 n~~G~Gp~S~~v~~~T~e~ 114 (120)
T 1ujt_A 96 FNEFQGMDSESKTVRTTEE 114 (120)
T ss_dssp SSSCCCCCCCCEEEEECSS
T ss_pred CCCccCCCCCCEEEECCCC
Confidence 35677888999754
|
| >2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A | Back alignment and structure |
|---|
Probab=96.07 E-value=0.03 Score=48.06 Aligned_cols=77 Identities=14% Similarity=0.074 Sum_probs=47.7
Q ss_pred ccCCCCCcEEEEEEcCC-----CCCCCEEEEeecCC-CCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 5 QGDHEGKGVIVSWVTPD-----EPGSNTVLYWAENS-TLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 5 ~g~~~~~~~~v~W~t~~-----~~~~~~v~y~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
......+++.|.|.... ....-.|+|..... ..+....-. .......+|++|+|+|.|.|||..
T Consensus 124 ~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~----------~~~~~~~~i~~L~p~t~Y~~~V~A 193 (214)
T 2ibg_A 124 IEEYSETAVVLHWSLASDADEHLITGYYAYYRPSSSAGEYFKATIE----------GAHARSFKIAPLETATMYEFKLQS 193 (214)
T ss_dssp CBCCSSSCEEEEEECCTTCCGGGCCEEEEEEEETTCCSCCEEEEEE----------CTTCCEEEECSCCTTCEEEEEEEE
T ss_pred EEEccCCeEEEEEeCCCccCCCCcceEEEEEEECCCCcceEEeecc----------CCcceEEEeCCCCCCCEEEEEEEE
Confidence 33445678999999873 11234677776554 222221110 011124678999999999999954
Q ss_pred ------CCceeeEEEEcCC
Q 040421 79 ------GNATRQFSFTTPP 91 (407)
Q Consensus 79 ------~~~s~~~~F~T~p 91 (407)
+.+|....++|..
T Consensus 194 ~n~~G~g~~S~~~~~~T~~ 212 (214)
T 2ibg_A 194 FSAASASEFSALKQGRTQR 212 (214)
T ss_dssp ECSSCBCCCCCCEEEECCC
T ss_pred EcCCccCCCcceEeeEecC
Confidence 2467778888864
|
| >3tes_A Tencon; fibronectin type III domain, FN3, consensus design, de novo; 2.50A {Synthetic} | Back alignment and structure |
|---|
Probab=96.00 E-value=0.029 Score=42.03 Aligned_cols=66 Identities=15% Similarity=0.215 Sum_probs=42.8
Q ss_pred eeeccCCCCCcEEEEEEcCCCC-CCCEEEEeecCCC-CceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 2 HITQGDHEGKGVIVSWVTPDEP-GSNTVLYWAENST-LKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 2 ~l~~g~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
.|.+.+.++++++|+|..+..+ ....|+|...... ..... ... .-.-.++|+||+|+|.|.++|..
T Consensus 7 ~l~v~~~t~~Sv~lsW~~p~~~i~~Y~v~y~~~~~~~~~~~~-----~~~------~~~t~~~l~gL~P~t~Y~~~V~A 74 (98)
T 3tes_A 7 NLVVSEVTEDSLRLSWTAPDAAFDSFMIQYQESEKVGEAINL-----TVP------GSERSYDLTGLKPGTEYTVSIYG 74 (98)
T ss_dssp EEEEESCCSSCEEEEEECCTTSCSEEEEEEEETTBCSCCEEE-----EEE------TTCSEEEECSCCTTCEEEEEEEE
T ss_pred ceEEEecCCCeEEEEecCCcCccceEEEEEEECCCCCceEEE-----EcC------CCcCEEEECCCCCCCEEEEEEEE
Confidence 3566677889999999987532 2346778876421 11111 111 11235789999999999999965
|
| >1va9_A DOWN syndrome cell adhesion molecule like- protein 1B; FNIII domain, dscaml1 protein, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.96 E-value=0.0086 Score=46.54 Aligned_cols=84 Identities=15% Similarity=0.205 Sum_probs=50.0
Q ss_pred eeccCCCCCcEEEEEEcCCC------CCCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEe
Q 040421 3 ITQGDHEGKGVIVSWVTPDE------PGSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEV 76 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~------~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v 76 (407)
|.......+++.|.|..... .....|+|............ ... .....-...++|++|+|+|.|.++|
T Consensus 22 ~~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~~--~~~----~~~~~~~~~~~i~~L~p~t~Y~~~V 95 (122)
T 1va9_A 22 VTLQPVTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQYS--IVE----MKATGDSEVYTLDNLKKFAQYGVVV 95 (122)
T ss_dssp EEEEECSSSEEEEEEECCCSSTTCSCCCEEEEEEEESSTTSCCSCB--CCB----CCCCSSEEEEEEESCCSSCCEEEEE
T ss_pred eEEEeccCCEEEEEEeCCCCcCCCCcEeEEEEEEEECCCCCCcceE--EEE----EecCCceeEEEeCCCCCCCEEEEEE
Confidence 33444456899999998753 12346777665532111000 000 0011224667899999999999999
Q ss_pred Cc------CCceeeEEEEcCCC
Q 040421 77 GV------GNATRQFSFTTPPG 92 (407)
Q Consensus 77 ~~------~~~s~~~~F~T~p~ 92 (407)
.. +.+|....|+|...
T Consensus 96 ~A~n~~G~g~~S~~~~~~T~~~ 117 (122)
T 1va9_A 96 QAFNRAGTGPSSSEINATTLES 117 (122)
T ss_dssp EEEETTEECCCCCCEECCCCSS
T ss_pred EEEcCCCCCCCccCEEEEeCCC
Confidence 54 34677778888754
|
| >2ed9_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.94 E-value=0.008 Score=46.96 Aligned_cols=71 Identities=15% Similarity=0.288 Sum_probs=46.2
Q ss_pred CCCcEEEEEEcCCC--C----CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc----
Q 040421 9 EGKGVIVSWVTPDE--P----GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV---- 78 (407)
Q Consensus 9 ~~~~~~v~W~t~~~--~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~---- 78 (407)
..+++.|.|..+.. . ....|+|........... . ......++|.+|+|+|.|.++|..
T Consensus 41 ~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~------~------~~~~~~~~i~~L~p~t~Y~~~V~A~n~~ 108 (124)
T 2ed9_A 41 NSRSIKVSWLPPPSGTQNGFITGYKIRHRKTTRRGEMET------L------EPNNLWYLFTGLEKGSQYSFQVSAMTVN 108 (124)
T ss_dssp ETTEEEEECBCCCTTTCCSCCCEEEEEEEESSSSCCEEE------E------CSSCSEEEEECCCSSCEEEECEEEECSS
T ss_pred CCCEEEEEEECcCCcCCCcEEeEEEEEEEECCCCcceEE------e------cCCcCEEEEcCCCCCCEEEEEEEEEcCC
Confidence 35789999988753 1 124677777654322111 1 112235688999999999999954
Q ss_pred --CCceeeEEEEcCC
Q 040421 79 --GNATRQFSFTTPP 91 (407)
Q Consensus 79 --~~~s~~~~F~T~p 91 (407)
+.+|....|+|+.
T Consensus 109 G~g~~S~~~~~~T~e 123 (124)
T 2ed9_A 109 GTGPPSNWYTAETPE 123 (124)
T ss_dssp CBCCCCCCEEEECCC
T ss_pred ccCCCCCCEEEECCC
Confidence 3467788888864
|
| >2dn7_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.85 E-value=0.041 Score=41.49 Aligned_cols=71 Identities=15% Similarity=0.294 Sum_probs=44.1
Q ss_pred CCCcEEEEEEcCCCCC----CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCcC-----
Q 040421 9 EGKGVIVSWVTPDEPG----SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGVG----- 79 (407)
Q Consensus 9 ~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~~----- 79 (407)
..+++.|.|..+.... .-.|+|.......+.... .. .-...++|++|+|+|.|.+||..-
T Consensus 19 ~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~-----~~------~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~ 87 (107)
T 2dn7_A 19 AMNTALLQWHPPKELPGELLGYRLQYCRADEARPNTID-----FG------KDDQHFTVTGLHKGTTYIFRLAAKNRAGL 87 (107)
T ss_dssp STTEEEEEEECCSSCSSCCCEEEEEEEETTCSSCEEEE-----EE------TTCCEEEEECCCTTCEEEEEEEEEETTEE
T ss_pred CCCEEEEEECCCCCCCCceeEEEEEEEECCCCCCEEEE-----eC------CCccEEEeCCCCCCCEEEEEEEEEcCCcc
Confidence 5689999999874322 346777766543332211 00 112356789999999999999652
Q ss_pred -CceeeEEEEcCC
Q 040421 80 -NATRQFSFTTPP 91 (407)
Q Consensus 80 -~~s~~~~F~T~p 91 (407)
..+. ..|+|..
T Consensus 88 g~~s~-~~~~T~~ 99 (107)
T 2dn7_A 88 GEEFE-KEIRTPE 99 (107)
T ss_dssp EEEEE-EEEECCC
T ss_pred cCCee-eEEeCCC
Confidence 2344 4577754
|
| >2dmk_A Midline 2 isoform 2; midline defect 2, tripartite motif protein 1, midin-2, ring finger protein 60, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.84 E-value=0.013 Score=46.27 Aligned_cols=77 Identities=17% Similarity=0.196 Sum_probs=46.3
Q ss_pred eccCCCCCcEEEEEEcCCCCC-CC-EEEEeecC-----------CCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCC
Q 040421 4 TQGDHEGKGVIVSWVTPDEPG-SN-TVLYWAEN-----------STLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDT 70 (407)
Q Consensus 4 ~~g~~~~~~~~v~W~t~~~~~-~~-~v~y~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t 70 (407)
.....+.++++|.|..+...+ .. .++|.... ...+..+.. . .....+|+||+|+|
T Consensus 24 ~~~~~~~~sv~L~W~~p~~~g~~~Y~~~Y~~~~~~~~~~~~~~~~~~w~~~~~-~-----------~~~~~~v~gL~p~t 91 (127)
T 2dmk_A 24 ELCTASHDTITVHWISDDEFSISSYELQYTIFTGQANFISLYNSVDSWMIVPN-I-----------KQNHYTVHGLQSGT 91 (127)
T ss_dssp EEEEEETTEEEEEEECSCCSSEEEEEEEEEEESCCSCHHHHHHTGGGSEEEEE-E-----------CSSEEEEESCCSSC
T ss_pred EEEeeeCCEEEEEECCCCCCCccceEEEEEEecccccccccccCCCCcEEeec-c-----------cCCeEEECCCCCCC
Confidence 334445689999999875432 22 67776511 112222211 1 01135789999999
Q ss_pred EEEEEeCcC-----CceeeEEEEcCCC
Q 040421 71 KYYYEVGVG-----NATRQFSFTTPPG 92 (407)
Q Consensus 71 ~Y~Y~v~~~-----~~s~~~~F~T~p~ 92 (407)
.|.|||..- ..|....++|++.
T Consensus 92 ~Y~frV~A~N~~G~~~S~~v~~~T~~~ 118 (127)
T 2dmk_A 92 RYIFIVKAINQAGSRNSEPTRLKTNSQ 118 (127)
T ss_dssp EEEEEEEEEESSCEEECCCEEEECCSS
T ss_pred EEEEEEEEEeCCCCCCCcCeEeEeCCC
Confidence 999999652 2456677888753
|
| >2yrz_A Integrin beta-4; GP150, CD104 antigen, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.80 E-value=0.016 Score=44.71 Aligned_cols=66 Identities=18% Similarity=0.219 Sum_probs=39.6
Q ss_pred eeccCCCCCcEEEEEEcCCCCC---CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 3 ITQGDHEGKGVIVSWVTPDEPG---SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~~---~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
|.+.....+++.|.|.-....+ ...|+|.......+.... . ...-...++|++|+|+|.|.+||..
T Consensus 24 l~~~~~~~~sv~l~W~~p~~~g~i~~Y~v~~~~~~~~~~~~~~-----~-----~~~~~~~~~i~~L~p~t~Y~~~V~A 92 (118)
T 2yrz_A 24 LVFSALGPTSLRVSWQEPRCERPLQGYSVEYQLLNGGELHRLN-----I-----PNPAQTSVVVEDLLPNHSYVFRVRA 92 (118)
T ss_dssp CEECCCBTTEEEEECCCCCCSSCEEEEEEEEEBSSSCCEEEEE-----E-----SCTTCCEEEEESCCTTCEEEEEEEE
T ss_pred eEEEeCCCCEEEEEeCCCCCCCCccEEEEEEEECCCCceEEEE-----c-----CCCCcCEEEeCCCCCCCEEEEEEEE
Confidence 3444556789999998875432 234566554432221111 0 0111235778999999999999965
|
| >2dlh_A Receptor-type tyrosine-protein phosphatase delta; protein-tyrosine phosphatase delta, R-PTP-delta, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.77 E-value=0.0079 Score=46.69 Aligned_cols=81 Identities=19% Similarity=0.256 Sum_probs=47.1
Q ss_pred eeccCCCCCcEEEEEEcCCCCCCC----EEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 3 ITQGDHEGKGVIVSWVTPDEPGSN----TVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~~~~----~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
|.......++++|.|......... .|+|............ .. ...-...++|++|+|+|.|.+||..
T Consensus 25 l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~-~~--------~~~~~~~~~i~~L~p~t~Y~~~V~A 95 (121)
T 2dlh_A 25 VQARMLSSTTILVQWKEPEEPNGQIQGYRVYYTMDPTQHVNNWM-KH--------NVADSQITTIGNLVPQKTYSVKVLA 95 (121)
T ss_dssp EEECCCSSSBCCEEEECCSCCCSCEEEEEEECCSCTTSCTTTSC-CC--------CCSSCSEECCBSCCSSCEEEEEEEE
T ss_pred cEEEecCCCEEEEEECCCCCCCCcEeEEEEEEEeCCCCCccccE-EE--------ecCCceEEEecCCCCCCEEEEEEEE
Confidence 444455678999999987433222 3444433221100000 00 0011235689999999999999954
Q ss_pred ------CCceeeEEEEcCCC
Q 040421 79 ------GNATRQFSFTTPPG 92 (407)
Q Consensus 79 ------~~~s~~~~F~T~p~ 92 (407)
+.+|....|+|.+.
T Consensus 96 ~n~~G~g~~S~~~~~~T~~~ 115 (121)
T 2dlh_A 96 FTSIGDGPLSSDIQVITQTG 115 (121)
T ss_dssp EESSCBCCCCCCEEEECCCC
T ss_pred EeCCccCCCCCCEEEECCCC
Confidence 34677788998754
|
| >2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A | Back alignment and structure |
|---|
Probab=95.77 E-value=0.05 Score=46.46 Aligned_cols=94 Identities=15% Similarity=0.169 Sum_probs=52.4
Q ss_pred eeccCCCCCcEEEEEEcCCCC--CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCcC-
Q 040421 3 ITQGDHEGKGVIVSWVTPDEP--GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGVG- 79 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~--~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~~- 79 (407)
|.......++++|.|...... ..-.|+|...++....... . .. .-...++|++|+|+|.|.++|..-
T Consensus 29 l~~~~~~~~sv~lsW~~p~~~~i~~Y~v~~~~~~~~~~~~~~-~---~~------~~~~~~~i~~L~p~t~Y~~~V~a~~ 98 (203)
T 2gee_A 29 LSFVDITDSSIGLRWTPLNSSTIIGYRITVVAAGEGIPIFED-F---VD------SSVGYYTVTGLEPGIDYDISVYTVK 98 (203)
T ss_dssp EEEECCTTTCEEEEEECCSSSSCCEEEEEEEESSSSSCCEEE-E---EE------TTCCEEEECSCCTTCEEEEEEEEES
T ss_pred cEEEecCCCEEEEEecCCCCCCccEEEEEEEECCCCCCceeE-E---cC------CCccEEEeCCCCCCCEEEEEEEEEe
Confidence 455555678999999987532 1356777766543221111 1 00 112356789999999999999642
Q ss_pred --CceeeEEEEcCCCCCCCCCcEEEEEec
Q 040421 80 --NATRQFSFTTPPGVGPDVPYTFGLIGD 106 (407)
Q Consensus 80 --~~s~~~~F~T~p~~~~~~~~~f~~~gD 106 (407)
+.+....+++.........+++...++
T Consensus 99 ~~g~s~~~~~~t~~~~p~P~~l~~~~~~~ 127 (203)
T 2gee_A 99 NGGESTPTTLTQQTAVPPPTDLRFTNIGP 127 (203)
T ss_dssp SSCBCCCEEEEEECCCCCCEEEEEEEEET
T ss_pred CCCccccEeeeecCCCcCCCceEEEEcCC
Confidence 334433444432222234455544444
|
| >3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A | Back alignment and structure |
|---|
Probab=95.75 E-value=0.065 Score=45.84 Aligned_cols=79 Identities=14% Similarity=0.070 Sum_probs=47.7
Q ss_pred eeccCCCCCcEEEEEEcCCCC--------CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEE
Q 040421 3 ITQGDHEGKGVIVSWVTPDEP--------GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYY 74 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~--------~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 74 (407)
|.......++++|.|.-+..+ ..-.|+|.............. .-...++|++|+|+|.|.+
T Consensus 11 l~~~~~~~~si~l~W~~p~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~-----------~~~~~~~i~~L~p~t~Y~~ 79 (211)
T 3p4l_A 11 VQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKNAN-----------ATTLSYLVTGLKPNTLYEF 79 (211)
T ss_dssp EEEEECSSSCEEEEEECTTSCTTCCCCSSCEEEEEEEECC---CCCEEEE-----------ESSSEEEECSCCTTCEEEE
T ss_pred EEEEecCCCeEEEEEeCCCCCcccccCCCcEEEEEEEECCCCcceEEEeC-----------CCceEEEecCcCCCCEEEE
Confidence 444455678999999975311 135677776543211111111 1133577899999999999
Q ss_pred EeCc------CCceeeEEEEcCCC
Q 040421 75 EVGV------GNATRQFSFTTPPG 92 (407)
Q Consensus 75 ~v~~------~~~s~~~~F~T~p~ 92 (407)
+|.. +.+|....++|.+.
T Consensus 80 ~V~A~n~~g~~~~S~~~~~~t~~~ 103 (211)
T 3p4l_A 80 SVMVTKGRRSSTWSMTAHGTTFEL 103 (211)
T ss_dssp EEEEEETTEECCCCCCEEEECCCC
T ss_pred EEEEEcCCCCCccceeEeeecccC
Confidence 9964 23566778888653
|
| >1x5h_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.74 E-value=0.025 Score=44.57 Aligned_cols=80 Identities=21% Similarity=0.287 Sum_probs=48.0
Q ss_pred eeccCCCCCcEEEEEEcCCC--CCCC----EEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEe
Q 040421 3 ITQGDHEGKGVIVSWVTPDE--PGSN----TVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEV 76 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~--~~~~----~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v 76 (407)
|.......+++.|.|..... .... .|+|...... ....... .......++|++|+|+|.|.++|
T Consensus 25 l~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~------~~~~~~~----~~~~~~~~~i~~L~p~t~Y~~~V 94 (132)
T 1x5h_A 25 LSLEVRNSKSIMIHWQPPAPATQNGQITGYKIRYRKASRK------SDVTETL----VSGTQLSQLIEGLDRGTEYNFRV 94 (132)
T ss_dssp EEEECCSSSEEEEEEECCCTTTCCSCEEEEBCEEEETTEE------EEEECCB----CCTTCCEEEEECCCSSCEEEEEC
T ss_pred eEEEeCCCCEEEEEEeCCCCcCCCceEeEEEEEEEECCCC------CccEEEE----eCCCccEEEeCCCCCCCEEEEEE
Confidence 44455567899999998753 2222 3444443210 0000000 11223467889999999999999
Q ss_pred Cc------CCceeeEEEEcCCC
Q 040421 77 GV------GNATRQFSFTTPPG 92 (407)
Q Consensus 77 ~~------~~~s~~~~F~T~p~ 92 (407)
.. +.+|....|+|.+.
T Consensus 95 ~A~n~~G~g~~S~~~~~~T~~~ 116 (132)
T 1x5h_A 95 AALTINGTGPATDWLSAETFES 116 (132)
T ss_dssp EEEETTEEEEECCCEEEECCSS
T ss_pred EEEcCCccCCCCcCEEeEcCcc
Confidence 65 24677788999763
|
| >3teu_A Fibcon; FN3 domain, fibronectin TPYE III domain, consensus design, S de novo protein; HET: DIO; 1.00A {Synthetic} | Back alignment and structure |
|---|
Probab=95.74 E-value=0.026 Score=42.04 Aligned_cols=66 Identities=17% Similarity=0.223 Sum_probs=40.4
Q ss_pred eeccCCCCCcEEEEEEcCCCC-CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 3 ITQGDHEGKGVIVSWVTPDEP-GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
|.+.....++++|.|..+... ....|+|............ . .. .-...++|.||+|+|.|.++|..
T Consensus 8 l~v~~~~~~sv~l~W~~p~~~i~~Y~v~y~~~~~~~~~~~~-~---~~------~~~~~~~i~~L~p~t~Y~~~V~A 74 (98)
T 3teu_A 8 LQVTNVTDTSITVSWTPPSATITGYRITYTPSNGPGEPKEL-T---VP------PSSTSVTITGLTPGVEYVVSVYA 74 (98)
T ss_dssp EEEEEECSSCEEEEEECCSSCCSEEEEEEEETTSCSCCEEE-E---EC------TTCSEEEECSCCTTCEEEEEEEE
T ss_pred eEEEEecCCEEEEEEeCCCCcccEEEEEEEECCCCCceEEE-E---cC------CCcCEEEecCCCCCCEEEEEEEE
Confidence 344444568999999987432 2356778765432111110 0 10 12335789999999999999965
|
| >2e3v_A Neural cell adhesion molecule 1, 140 kDa isoform; NCAM, N-CAM 1, NCAM-120, CD56 antigen, membra protein, glycoprotein, structural genomics, NPPSFA; HET: PGE BTB; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.71 E-value=0.037 Score=43.24 Aligned_cols=76 Identities=17% Similarity=0.198 Sum_probs=44.3
Q ss_pred CCCcEEEEEEcCCCCC-----CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc-----
Q 040421 9 EGKGVIVSWVTPDEPG-----SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV----- 78 (407)
Q Consensus 9 ~~~~~~v~W~t~~~~~-----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~----- 78 (407)
..+ ++|.|.-+.... .-.|+|.......+..... ... ...-...++|++|+|+|.|.+||..
T Consensus 20 ~~t-v~l~W~~P~~~~G~pI~~Y~v~~~~~~~~~~~~~~~---~~~----~~~~~~~~~i~~L~p~t~Y~~rV~A~n~~G 91 (122)
T 2e3v_A 20 SST-AQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWY---DAK----EASMEGIVTIVGLKPETTYAVRLAALNGKG 91 (122)
T ss_dssp SSC-EEEEEECCCCC--CCEEEEEEEEEETTCCSCEEEEE---EHH----HHHTTTEEEECSCCTTCEEEEEEEEEETTE
T ss_pred CCc-EEEEECCCCcCCCCcceEEEEEEEECCCCCccccee---eee----ecCccceEEeCCCCCCCEEEEEEEEEeCCc
Confidence 345 999999764322 2356666655433311100 000 0011235789999999999999954
Q ss_pred -CCceeeEEEEcCCC
Q 040421 79 -GNATRQFSFTTPPG 92 (407)
Q Consensus 79 -~~~s~~~~F~T~p~ 92 (407)
+.+|....|+|.|.
T Consensus 92 ~g~~S~~~~~~t~~~ 106 (122)
T 2e3v_A 92 LGEISAASEFKTQPV 106 (122)
T ss_dssp ECCCCCCEEEECCCC
T ss_pred cCCCcccccccccCC
Confidence 34667777877664
|
| >2edx_A Protein tyrosine phosphatase, receptor type, F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.71 E-value=0.03 Score=44.17 Aligned_cols=82 Identities=23% Similarity=0.197 Sum_probs=47.9
Q ss_pred eeccCCCCCcEEEEEEcC--CCCC----CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEe
Q 040421 3 ITQGDHEGKGVIVSWVTP--DEPG----SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEV 76 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~--~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v 76 (407)
|.......++++|.|... .... ...|+|........... .... .......++|++|+|+|.|.++|
T Consensus 25 l~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~--~~~~------~~~~~~~~~i~~L~p~t~Y~~~V 96 (134)
T 2edx_A 25 VMCVSMGSTTVRVSWVPPPADSRNGVITQYSVAYEAVDGEDRGRH--VVDG------ISREHSSWDLVGLEKWTEYRVWV 96 (134)
T ss_dssp EEEECSSSSEEEEEEECCCSTTCSSCEEEEEEEEEESSSSCCCCE--EECC------CBTTCSEEEEESCCTTCEEEEEE
T ss_pred cEEEeCCCCEEEEEecCCCccCCCCceeEEEEEEEECCCCCcccE--EEEe------eCCCccEEEeCCCCCCCEEEEEE
Confidence 344444567999999987 2222 23455555443211100 0000 01223457889999999999999
Q ss_pred Cc------CCceeeEEEEcCCC
Q 040421 77 GV------GNATRQFSFTTPPG 92 (407)
Q Consensus 77 ~~------~~~s~~~~F~T~p~ 92 (407)
.. +.+|....|+|.+.
T Consensus 97 ~A~n~~G~g~~S~~~~~~T~~~ 118 (134)
T 2edx_A 97 RAHTDVGPGPESSPVLVRTDED 118 (134)
T ss_dssp EEEETTBCCCCCCCEEEECCCC
T ss_pred EEEcCCCcCCCCCCEEeecCCC
Confidence 54 34677778888754
|
| >1x3d_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.70 E-value=0.018 Score=44.53 Aligned_cols=73 Identities=12% Similarity=0.194 Sum_probs=44.6
Q ss_pred CCCCcEEEEEEcCCCCCCC----EEEEeecCC-CCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc----
Q 040421 8 HEGKGVIVSWVTPDEPGSN----TVLYWAENS-TLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV---- 78 (407)
Q Consensus 8 ~~~~~~~v~W~t~~~~~~~----~v~y~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~---- 78 (407)
...+++.|.|......... .|+|..... ..+..+. . ... ..++|.+|+|+|.|.|||..
T Consensus 29 ~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~-~---------~~~--~~~~v~~L~p~t~Y~frV~A~n~~ 96 (118)
T 1x3d_A 29 RTKNSLTLQWKAPSDNGSKIQNFVLEWDEGKGNGEFCQCY-M---------GSQ--KQFKITKLSPAMGCKFRLSARNDY 96 (118)
T ss_dssp EETTEEEEECCCCCCCSSCEEEEEEEECTTTSSSCCEEEE-E---------ESC--SEEEEESCCTTCEEEEECCEEESS
T ss_pred cCCCEEEEEECCCCCCCCcceEEEEEEecCCCCCCeEEee-c---------cCC--cEEEeCCCCCCCEEEEEEEEEECC
Confidence 3467899999987533333 444544433 1222111 1 011 34588999999999999964
Q ss_pred --CCceeeEEEEcCCC
Q 040421 79 --GNATRQFSFTTPPG 92 (407)
Q Consensus 79 --~~~s~~~~F~T~p~ 92 (407)
+.+|....|+|.+.
T Consensus 97 G~s~~S~~~~~~T~~~ 112 (118)
T 1x3d_A 97 GTSGFSEEVLYYTSGC 112 (118)
T ss_dssp CBCCCCCCEEEECSCC
T ss_pred CCCCCccCEEEEcCCC
Confidence 24567777888754
|
| >2cum_A Tenascin-X; hexabrachion-like, fibronectin type III domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.69 E-value=0.075 Score=40.20 Aligned_cols=79 Identities=14% Similarity=0.159 Sum_probs=48.7
Q ss_pred eeeccCCCCCcEEEEEEcCCCC-CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCcC-
Q 040421 2 HITQGDHEGKGVIVSWVTPDEP-GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGVG- 79 (407)
Q Consensus 2 ~l~~g~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~~- 79 (407)
.|.+.+...+++.|+|.-+... ....|+|..... ....+ .. ..-...++|+||+|+|.|.++|..-
T Consensus 13 ~l~v~~~~~~sv~lsW~~p~~~i~~Y~i~y~~~~~-~~~~~-----~~------~~~~ts~~l~~L~p~t~Y~~~V~A~~ 80 (105)
T 2cum_A 13 DLEAKEVTPRTALLTWTEPPVRPAGYLLSFHTPGG-QTQEI-----LL------PGGITSHQLLGLFPSTSYNARLQAMW 80 (105)
T ss_dssp EEEEESCCSSCEEEEEECCSSCCSEEEEEEECTTS-CEEEE-----EE------CSSCSEEEECSCCTTCEEEEEEEEEB
T ss_pred ceEEEeccCCEEEEEEcCCCCccceEEEEEEeCCC-ceEEE-----EE------CCCccEEEECCCCCCCEEEEEEEEEe
Confidence 3556666788999999876432 234677776543 11111 00 1123467899999999999999652
Q ss_pred --C--ceeeEEEEcCCC
Q 040421 80 --N--ATRQFSFTTPPG 92 (407)
Q Consensus 80 --~--~s~~~~F~T~p~ 92 (407)
+ ......|+|...
T Consensus 81 ~~g~s~~~~~~~~T~~~ 97 (105)
T 2cum_A 81 GQSLLPPVSTSFTTGGL 97 (105)
T ss_dssp TTBCCCCEEEEEECCCS
T ss_pred CCcccCCEEEEEEeCCc
Confidence 1 234567888643
|
| >3k2m_C Monobody HA4; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_D 1ttf_A 1ttg_A 3rzw_A 1fna_A | Back alignment and structure |
|---|
Probab=95.67 E-value=0.022 Score=42.97 Aligned_cols=65 Identities=15% Similarity=0.130 Sum_probs=41.0
Q ss_pred eeccCCCCCcEEEEEEcCCC---CCCCEEEEeecCCCC-ceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 3 ITQGDHEGKGVIVSWVTPDE---PGSNTVLYWAENSTL-KQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~---~~~~~v~y~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
|.+.+.+.++++|.|..+.. ...-.|+|....... ..... .. .-...++|+||+|+|.|.++|..
T Consensus 11 l~v~~~t~~Sv~l~W~~p~~~~~i~~Y~v~y~~~~~~~~~~~~~-----v~------~~~t~~~l~~L~p~t~Y~~~V~A 79 (101)
T 3k2m_C 11 LEVVAATPTSLLISWDAPMSSSSVYYYRITYGETGGNSPVQEFT-----VP------YSSSTATISGLSPGVDYTITVYA 79 (101)
T ss_dssp EEEEEEETTEEEEEECCCCTTSCCCEEEEEEEETTCSSCCEEEE-----EE------TTCCEEEECSCCTTCEEEEEEEE
T ss_pred eEEeecCCCEEEEEecCCCCCCceeeEEEEEEECCCCCccEEEE-----cC------CCccEEEECCCCCCCEEEEEEEE
Confidence 44445567899999998641 123467888765321 11111 11 11246789999999999999865
|
| >2cuh_A Tenascin-X; fibronectin type III domain, extracellular matrix, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.63 E-value=0.12 Score=39.70 Aligned_cols=79 Identities=18% Similarity=0.213 Sum_probs=48.3
Q ss_pred eeeccCCCCCcEEEEEEcCCCC-CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCcC-
Q 040421 2 HITQGDHEGKGVIVSWVTPDEP-GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGVG- 79 (407)
Q Consensus 2 ~l~~g~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~~- 79 (407)
.|.......+++.|.|.-+... ....|.|...... .... ... .-...++|+||+|+|.|.++|..-
T Consensus 13 ~l~~~~~t~~sv~lsW~~p~~~i~~Y~v~y~~~~~~-~~~~-----~v~------~~~t~~~l~~L~P~t~Y~~~V~A~~ 80 (115)
T 2cuh_A 13 QLRALNLTEGFAVLHWKPPQNPVDTYDIQVTAPGAP-PLQA-----ETP------GSAVDYPLHDLVLHTNYTATVRGLR 80 (115)
T ss_dssp EEECCCCSSSCEEEEEECCSSCCSEEEEEEECSSSC-CEEE-----EEE------TTCSEEEECSCCSSSEEEEEEEEEE
T ss_pred ceEEEeccCCeEEEEEECCCCCccEEEEEEEcCCCC-cEEE-----EEC------CCccEEEEeCCCCCCEEEEEEEEEe
Confidence 3556666788999999876432 2346777664321 1111 111 112357899999999999999652
Q ss_pred ----CceeeEEEEcCCC
Q 040421 80 ----NATRQFSFTTPPG 92 (407)
Q Consensus 80 ----~~s~~~~F~T~p~ 92 (407)
.......|+|.+.
T Consensus 81 ~~~~s~~~~~~~~T~~~ 97 (115)
T 2cuh_A 81 GPNLTSPASITFTTGLE 97 (115)
T ss_dssp TTEECCCEEEEEESCCC
T ss_pred CCCcCCCEEEEEEeCCC
Confidence 1223457888754
|
| >1x4z_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.37 E-value=0.03 Score=43.55 Aligned_cols=65 Identities=18% Similarity=0.155 Sum_probs=39.5
Q ss_pred ccCCCCCcEEEEEEcCCCC----CCCEEEEeecC-CCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 5 QGDHEGKGVIVSWVTPDEP----GSNTVLYWAEN-STLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 5 ~g~~~~~~~~v~W~t~~~~----~~~~v~y~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
+.....++++|.|.-.... ....|+|.... +..+..+.... ..-...++|++|+|++.|.|||..
T Consensus 26 ~~~~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~~---------~~~~~~~~v~~L~p~t~Y~frV~A 95 (121)
T 1x4z_A 26 ISTASETSVYVTWIPRGNGGFPIQSFRVEYKKLKKVGDWILATSAI---------PPSRLSVEITGLEKGISYKFRVRA 95 (121)
T ss_dssp EEECCSSEEEEECCCCCCTTSCCCEEEEEEEESSSCCCCEEEEEEE---------CTTCCEEEEESCCTTCEEEEEEEE
T ss_pred EEEccCCEEEEEEECCCCCCCcceEEEEEEEECCCCCceEEeeccc---------CCCcCEEEECCCCCCCEEEEEEEE
Confidence 3344568999999943321 23467777754 23333222110 112345678999999999999965
|
| >2h41_A Fibronectin; beta sandwich, cell adhesion, structural protein; NMR {Homo sapiens} PDB: 2h45_A | Back alignment and structure |
|---|
Probab=95.36 E-value=0.02 Score=42.88 Aligned_cols=66 Identities=20% Similarity=0.206 Sum_probs=43.2
Q ss_pred eeeccCCCCCcEEEEEEcCCCC-CCCEEEEeecCCCCc-eEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 2 HITQGDHEGKGVIVSWVTPDEP-GSNTVLYWAENSTLK-QQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 2 ~l~~g~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
.|.+.+.++++++|.|...... ....|+|.+...... .... . ++-...++|+||+|||.|.-+|..
T Consensus 11 ~l~vt~vt~~S~~lsW~~p~~~v~~Y~I~y~~~~g~~~~~~~~-----v------~g~~~s~~l~~L~PgT~Y~V~v~a 78 (95)
T 2h41_A 11 SESVTEITASSFVVSWVSASDTVSGFRVEYELSEEGDEPQYLD-----L------PSTATSVNIPDLLPGRKYIVNVYQ 78 (95)
T ss_dssp TTSCCCCGGGCEEEECCCSCTTEEEEEEEEEETTTCCCCEEEE-----E------ETTCCEEEECSCCTTCEEEEEEEE
T ss_pred EEEEEEeCCCeEEEEECCCCCCccEEEEEEEeCCCCCcceEEE-----C------CCCccEEEECCCCCCCEEEEEEEE
Confidence 3556677889999999987532 356788888654211 1111 0 112345789999999999877754
|
| >3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A | Back alignment and structure |
|---|
Probab=95.32 E-value=0.089 Score=45.91 Aligned_cols=78 Identities=14% Similarity=0.190 Sum_probs=48.7
Q ss_pred eeccCCCCCcEEEEEEcCCCC-CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc---
Q 040421 3 ITQGDHEGKGVIVSWVTPDEP-GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV--- 78 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~--- 78 (407)
|......+++++|.|.-.... ..-.|+|....+......... .....++|++|+|+|.|.++|..
T Consensus 12 l~~~~~~~~si~l~W~~p~g~i~~Y~v~~~~~~~~~~~~~~~~-----------~~~~~~~i~~L~p~t~Y~~~V~A~n~ 80 (234)
T 3f7q_A 12 PNAKAAGSRKIHFNWLPPSGKPMGYRVKYWIQGDSESEAHLLD-----------SKVPSVELTNLYPYCDYEMKVCAYGA 80 (234)
T ss_dssp EEEEECSSSCEEEEEECCSSCCCEEEEEEEETTSCGGGCEEEE-----------ESSSEEEECSCCTTCEEEEEEEEEET
T ss_pred eEEEEcCCCEEEEEEECCCCccceEEEEEEECCCCccceEEEc-----------CCccEEEECCCCCCCEEEEEEEEEeC
Confidence 444455678999999986422 235677776554322111111 11234678999999999999954
Q ss_pred ---CCceeeEEEEcCC
Q 040421 79 ---GNATRQFSFTTPP 91 (407)
Q Consensus 79 ---~~~s~~~~F~T~p 91 (407)
+.+|....|+|..
T Consensus 81 ~G~g~~s~~~~~~T~~ 96 (234)
T 3f7q_A 81 QGEGPYSSLVSCRTHQ 96 (234)
T ss_dssp TEECCCCCCEEEECCC
T ss_pred CCcCCCCCeEEEEcCC
Confidence 2356667888864
|
| >1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=95.29 E-value=0.06 Score=45.05 Aligned_cols=79 Identities=15% Similarity=0.122 Sum_probs=45.8
Q ss_pred eeccCCCCCcEEEEEEcCCCC-CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCcC--
Q 040421 3 ITQGDHEGKGVIVSWVTPDEP-GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGVG-- 79 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~~-- 79 (407)
|.......+++.|.|.-.... ..-.|+|............ .. .-...++|+||+|+|.|.++|..-
T Consensus 101 l~~~~~~~~sv~l~W~~p~~~i~~Y~v~~~~~~~~~~~~~~-----~~------~~~~~~~i~~L~p~t~Y~~~V~A~~~ 169 (186)
T 1qr4_A 101 ISFSDITENSATVSWTPPRSRVDSYRVSYVPITGGTPNVVT-----VD------GSKTRTKLVKLVPGVDYNVNIISVKG 169 (186)
T ss_dssp EEEESCCSSCEEEEECCCSSCCSEEEEEEEETTCCCCEEEE-----EE------TTCCEEEECSCCSSCEEEEEEEEEET
T ss_pred cEEEEeCCCEEEEEEECCCCcccEEEEEEEeCCCCCceEEE-----cC------CCcCEEEEcCCCCCCEEEEEEEEEcC
Confidence 334445668999999876432 2356777765532221111 10 112457789999999999999652
Q ss_pred -Cc--eeeEEEEcCCC
Q 040421 80 -NA--TRQFSFTTPPG 92 (407)
Q Consensus 80 -~~--s~~~~F~T~p~ 92 (407)
+. .....|+|.|.
T Consensus 170 ~g~s~p~~~~~~T~pd 185 (186)
T 1qr4_A 170 FEESEPISGILKTALD 185 (186)
T ss_dssp TEECCCEEEEEEC---
T ss_pred CCcCcCEEEEEEecCC
Confidence 22 23457778763
|
| >3t04_D Monobody 7C12; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.29 E-value=0.015 Score=44.09 Aligned_cols=66 Identities=15% Similarity=0.080 Sum_probs=40.5
Q ss_pred eeccCCCCCcEEEEEEcCCC----CCCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 3 ITQGDHEGKGVIVSWVTPDE----PGSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~----~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
|.+.+.+.++++|.|.-+.. ...-.|+|.......... ... .. .-...++|+||+|+|.|..+|..
T Consensus 14 l~v~~~t~~Sv~lsW~~p~~~~g~i~~Y~v~y~~~~~~~~~~-~~~---v~------~~~ts~~l~~L~p~t~Y~~~V~A 83 (103)
T 3t04_D 14 LEVVDATPTSLKISWDAYYSSWQNVKYYRITYGETGGDSPVQ-EFT---VP------GYYSTATISGLKPGVDYTITVYA 83 (103)
T ss_dssp CEEEEEETTEEEEECTTTTTTSCCCCEEEEEEEETTCSSCCE-EEE---EE------TTCCEEEECSCCTTCCEEEEEEE
T ss_pred eEEEecCCCEEEEEccCCCCCCCccceEEEEEEECCCCCccE-EEE---cC------CCcCEEEeCCCCCCCEEEEEEEE
Confidence 33444567899999988752 123478888764321111 001 10 11345789999999999999854
|
| >1wis_A KIAA1514 protein; FNIII domain, sidekick-2, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.28 E-value=0.065 Score=41.84 Aligned_cols=82 Identities=10% Similarity=-0.001 Sum_probs=46.8
Q ss_pred eeccCCCCCcEEEEEEcCCCCC----CCEEEEeec---CCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEE
Q 040421 3 ITQGDHEGKGVIVSWVTPDEPG----SNTVLYWAE---NSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYE 75 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~~----~~~v~y~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~ 75 (407)
|.+.....++++|.|.-..... ...|+|... ....+..+... . .......++|.+|+|+|.|.+|
T Consensus 24 l~~~~~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~~~w~~~~~~----~----~~~~~~~~~v~~L~p~t~Y~fr 95 (124)
T 1wis_A 24 LGISNIGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLIHQL----S----NEPDARSMEVPDLNPFTCYSFR 95 (124)
T ss_dssp EEEESCCSSCEEEEEECCCCCSSCCSEEEEEECBSCCSTTSCCEEEEEE----E----SCTTCSEEEECSCCTTSEECCC
T ss_pred CEEEEecCCEEEEEEECCCCCCCcccEEEEEEEECCCCCCCCCeEeeeE----c----cCCCceEEEeCCCCCCCEEEEE
Confidence 4445556789999996543222 246777662 22233222111 0 0111235788999999999999
Q ss_pred eCcC------Cceee-EEEEcCCC
Q 040421 76 VGVG------NATRQ-FSFTTPPG 92 (407)
Q Consensus 76 v~~~------~~s~~-~~F~T~p~ 92 (407)
|..- ..|.. ..++|.+.
T Consensus 96 V~A~N~~G~s~~S~~~~~~~T~~~ 119 (124)
T 1wis_A 96 MRQVNIVGTSPPSQPSRKIQTLQS 119 (124)
T ss_dssp CEEECSSCBCCCCCCCCCEECCCS
T ss_pred EEEEECCccCCCcCCccceEcCCC
Confidence 9642 23332 35777654
|
| >2yuw_A Myosin binding protein C, SLOW type; fibronectin III domain, SLOW- type protein, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.16 E-value=0.022 Score=43.41 Aligned_cols=66 Identities=23% Similarity=0.228 Sum_probs=39.2
Q ss_pred eeccCCCCCcEEEEEEcCCCCC-----CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeC
Q 040421 3 ITQGDHEGKGVIVSWVTPDEPG-----SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVG 77 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~~-----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~ 77 (407)
|.+.....++++|.|.-+.... ...|+|.......+..+. .........+|++|+|++.|.|||.
T Consensus 14 l~~~~~~~~sv~l~W~~p~~~g~~~i~~Y~v~~~~~~~~~w~~~~----------~~~~~~~~~~v~~L~p~t~Y~frV~ 83 (110)
T 2yuw_A 14 LTVDSVTDTTVTMRWRPPDHIGAAGLDGYVLEYCFEGTEDWIVAN----------KDLIDKTKFTITGLPTDAKIFVRVK 83 (110)
T ss_dssp EEEEEECSSCEEEEEECCSSCCSSCEEEEEEEEEETTCSSEEECC----------SSCCCSSEEEECSCCTTCEEEEEEE
T ss_pred cEEEeccCCeEEEEECCCCCCCCCCccEEEEEEEECCCccceEec----------cccCccCEEEECCCCCCCEEEEEEE
Confidence 3444445689999999764321 134566655432222110 0011223567899999999999996
Q ss_pred c
Q 040421 78 V 78 (407)
Q Consensus 78 ~ 78 (407)
.
T Consensus 84 A 84 (110)
T 2yuw_A 84 A 84 (110)
T ss_dssp E
T ss_pred E
Confidence 5
|
| >2crm_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.11 E-value=0.023 Score=44.13 Aligned_cols=72 Identities=11% Similarity=0.108 Sum_probs=43.8
Q ss_pred CCCcEEEEEEcCCCC-----CCCEEEEeecCCC-CceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc----
Q 040421 9 EGKGVIVSWVTPDEP-----GSNTVLYWAENST-LKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV---- 78 (407)
Q Consensus 9 ~~~~~~v~W~t~~~~-----~~~~v~y~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~---- 78 (407)
..+++.|.|..+... ....|+|...... .+..+. . . .....+|++|+|+|.|.|||..
T Consensus 31 ~~~sv~l~W~~p~~~gg~~i~~Y~v~~~~~~~~~~~~~~~-~---------~--~~~~~~v~~L~p~t~Y~frV~A~n~~ 98 (120)
T 2crm_A 31 HSHSFKITWDPPKDNGGATINKYVVEMAEGSNGNKWEMIY-S---------G--ATREHLCDRLNPGCFYRLRVYCISDG 98 (120)
T ss_dssp ETTEEEEECCCCTTCCSSCCCEEEEEEEESSSSCCCEEEE-C---------S--SCSEEEECSCCTTSCEEEEEEEEETT
T ss_pred CCCEEEEEECCCCcCCCCeeeEEEEEEccCCCCcCCEEEE-e---------c--cccEEEECCCCCCCEEEEEEEEEcCC
Confidence 457899999876432 2245666665431 232221 0 0 1224678999999999999964
Q ss_pred --CCceeeEEEEcCCC
Q 040421 79 --GNATRQFSFTTPPG 92 (407)
Q Consensus 79 --~~~s~~~~F~T~p~ 92 (407)
+.+|....++|.+.
T Consensus 99 G~s~~S~~~~~~T~~~ 114 (120)
T 2crm_A 99 GQSAVSESLLVQTPAV 114 (120)
T ss_dssp EECCCCCCCCCCCCCC
T ss_pred ccCCCcccEEEEcCCC
Confidence 23566666777643
|
| >2ic2_A CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin type III, protein binding; HET: MSE; 1.30A {Drosophila melanogaster} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.08 E-value=0.12 Score=39.96 Aligned_cols=70 Identities=17% Similarity=0.281 Sum_probs=36.9
Q ss_pred CCCCcEEEEEEcCCCCCCC----EEEEeec-CCCCceEEEEEEEEEEec--CCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 8 HEGKGVIVSWVTPDEPGSN----TVLYWAE-NSTLKQQAHGIVLTYNYF--NYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 8 ~~~~~~~v~W~t~~~~~~~----~v~y~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
...++++|.|.-+...+.. .|+|... .+..+..+.... .+... .....-...++|++|+|+|.|.+||..
T Consensus 14 ~~~~sv~L~W~~P~~~G~pI~~Y~Ve~r~~~~~~~w~~~~~~~-~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~FRV~A 90 (115)
T 2ic2_A 14 LSDESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNI-PYGKPKWNSELGKSFTASVTDLKPQHTYRFRILA 90 (115)
T ss_dssp CC---EEEEEEEECCSSCCEEEEEEEEEECC---CCEEEEEEE-ECCSCSCSSSSEEEEEEEECSCCSSEEEEEEEEE
T ss_pred EeCCEEEEEEcCCCCCCCCCceEEEEEEECCCCCCceECcccc-cccccccccccCceeEEEeCCCCCCCEEEEEEEE
Confidence 3568999999987544433 5666665 222343332111 10000 001123346789999999999999965
|
| >1k85_A Chitinase A1; fibronectin type III domain, chitin binding domain, carbohydrase, horizontal gene transfer, hydrolase; NMR {Bacillus circulans} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.07 E-value=0.086 Score=38.27 Aligned_cols=61 Identities=23% Similarity=0.328 Sum_probs=35.3
Q ss_pred eeccCCCCCcEEEEEEcCCCCCCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 3 ITQGDHEGKGVIVSWVTPDEPGSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
|.......+++.|.|..... ......|....+. . .. +.. . . -..++++|+||+.|+|+|..
T Consensus 10 l~~~~~~~~sv~L~W~~~~~-~~~i~~Y~v~~~~-~-~~-~~~------~-~----~~~~~~~L~~~t~Y~~~V~A 70 (88)
T 1k85_A 10 LASTAQTTSSITLSWTASTD-NVGVTGYDVYNGT-A-LA-TTV------T-G----TTATISGLAADTSYTFTVKA 70 (88)
T ss_dssp EEEEEECSSCEEEEEECCSC-CSSEEEEEEEESS-S-EE-EEE------S-S----SEEEECCCCSSCEEEEEEEE
T ss_pred cEEEeccCCEEEEEECCCCC-CCCccEEEEEECC-E-EE-eec------C-C----CEEEeCCCCCCCEEEEEEEE
Confidence 33444456899999988642 2234444432111 1 11 111 0 1 13568999999999999965
|
| >1uc6_A CNTF receptor, ciliary neurotrophic factor receptor alpha; cytokine, leukemia inhibitory factor, cytokine receptor; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=95.03 E-value=0.069 Score=40.69 Aligned_cols=69 Identities=19% Similarity=0.122 Sum_probs=43.9
Q ss_pred CCCcEEEEEEcCCC---C----CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCcC--
Q 040421 9 EGKGVIVSWVTPDE---P----GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGVG-- 79 (407)
Q Consensus 9 ~~~~~~v~W~t~~~---~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~~-- 79 (407)
..+++.|.|..+.. + -...|+|....+..+..+... . ...+.|.+|+|||.|..||...
T Consensus 22 ~~~~l~lsW~~P~~w~~~~~~~l~Y~v~y~~~~~~~w~~~~~~----------~--~~~~~l~~L~p~t~Y~~~VRa~~~ 89 (109)
T 1uc6_A 22 NPRRLEVTWQTPSTWPDPESFPLKFFLRYRPLILDQWQHVELS----------N--GTAHTITDAYAGKEYIIQVAAKDN 89 (109)
T ss_dssp CTTCEEEEEECCTTCCCTTTTTBCEEEEEEESSSCCCCCEEES----------S--CSEEEETTCCSSSCEEEEEECCBS
T ss_pred CCCEEEEEECCCCCccCCCcEEEEEEEEEEECCCCCcEEEecc----------c--CCEEEEeCCCCCCEEEEEEEEEeC
Confidence 35799999998753 1 245788888765433222110 0 1246789999999999999652
Q ss_pred ------CceeeEEEEc
Q 040421 80 ------NATRQFSFTT 89 (407)
Q Consensus 80 ------~~s~~~~F~T 89 (407)
.||....++|
T Consensus 90 g~g~wS~WS~~~~~~~ 105 (109)
T 1uc6_A 90 EIGTWSDWSVAAHATP 105 (109)
T ss_dssp SSCCCCCCCEEEEECC
T ss_pred CCCCcCcCCCCeeeee
Confidence 3555555544
|
| >2dbj_A Proto-oncogene tyrosine-protein kinase MER precursor; C-MER, receptor tyrosine kinase mertk, FN3 domain, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.00 E-value=0.081 Score=41.23 Aligned_cols=34 Identities=9% Similarity=0.104 Sum_probs=27.6
Q ss_pred EEEEcCCCCCCEEEEEeCc------CCceeeEEEEcCCCC
Q 040421 60 HCTIEDLEFDTKYYYEVGV------GNATRQFSFTTPPGV 93 (407)
Q Consensus 60 ~~~l~gL~p~t~Y~Y~v~~------~~~s~~~~F~T~p~~ 93 (407)
.++|++|+|+|.|.+||.. +.+|....|+|++..
T Consensus 80 ~~~l~~L~p~t~Y~~~V~A~n~~G~Gp~S~~~~~~T~~~~ 119 (124)
T 2dbj_A 80 RARISVQVHNATCTVRIAAVTRGGVGPFSDPVKIFIPAHS 119 (124)
T ss_dssp CEEEECCCSSSEEEECEEEEESSCBCCCCCCEEEECCCSC
T ss_pred eEEecCCCCCCEEEEEEEEECCCccCCCCCCEEEEcCCCC
Confidence 5678999999999999953 357888899997653
|
| >3qht_C Monobody YSMB-1; fibronectin type III, yeast small ubiquitin-like modifier, S NOVO protein; 2.40A {Artificial gene} | Back alignment and structure |
|---|
Probab=94.97 E-value=0.035 Score=41.35 Aligned_cols=65 Identities=14% Similarity=0.154 Sum_probs=40.7
Q ss_pred eeccCCCCCcEEEEEEcCCCC-CCCEEEEeecCCCC-ceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 3 ITQGDHEGKGVIVSWVTPDEP-GSNTVLYWAENSTL-KQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
|.+.+.+.+++.|.|..+... ....|+|....... ..... .. .-...++|+||+|+|.|..+|..
T Consensus 11 l~v~~~t~~Si~lsW~~p~~~i~~Y~v~y~~~~~~~~~~~~~-----v~------~~~t~~~l~~L~p~t~Y~v~V~A 77 (97)
T 3qht_C 11 LEVVAATPTSLLISWDASSSSVSYYRITYGETGGNSPVQEFT-----VP------GSSSTATISGLSPGVDYTITVYA 77 (97)
T ss_dssp CEEEEEETTEEEEECCCCCSSCCEEEEEEEESSSCSCCEEEE-----EE------TTCCEEEECSCCTTCEEEEEEEE
T ss_pred eEEEecCCCEEEEEEeCCCCCCCEEEEEEEECCCCCccEEEE-----eC------CCcCEEEeCCCCCCCEEEEEEEE
Confidence 334445678999999876422 23567787765421 11111 11 11345789999999999999965
|
| >3qwq_B Adnectin; cell surface receptor, tyrosine kinase, glycoprotein, adnect antitumor, drug, engineered binding protein; HET: NAG BMA MAN FUC; 2.75A {Homo sapiens} PDB: 3qwr_D* | Back alignment and structure |
|---|
Probab=94.96 E-value=0.057 Score=41.75 Aligned_cols=65 Identities=17% Similarity=0.192 Sum_probs=41.6
Q ss_pred eeccCCCCCcEEEEEEcCCCC-CCCEEEEeecCCCC-ceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 3 ITQGDHEGKGVIVSWVTPDEP-GSNTVLYWAENSTL-KQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
|.+.+.+.+++.|.|..+... ....|+|....... .... ... .-...++|+||+|+|.|..+|..
T Consensus 10 L~v~~~t~~Sv~lsW~~p~g~i~~Y~v~y~~~~~~~~~~~~-----~v~------~~~ts~~l~gL~P~T~Y~v~V~A 76 (114)
T 3qwq_B 10 LEVVAATPTSLLISWDSGRGSYQYYRITYGETGGNSPVQEF-----TVP------GPVHTATISGLKPGVDYTITVYA 76 (114)
T ss_dssp EEEEEEETTEEEEEEECCSCCCSEEEEEEEESSCSSCCEEE-----EEE------TTCCEEEECSCCTTCEEEEEEEE
T ss_pred eEEEecCCCEEEEEEcCCcCcccEEEEEEEECCCCCccEEE-----EeC------CCcCEEEeCCCCCCCEEEEEEEE
Confidence 444455678999999986432 34578888765421 1111 111 11235789999999999999854
|
| >1v5j_A KIAA1355 protein, RSGI RUH-008; FN3 domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.94 E-value=0.032 Score=42.83 Aligned_cols=79 Identities=11% Similarity=0.075 Sum_probs=47.0
Q ss_pred eeccCCCCCcEEEEEEcCCCC----CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 3 ITQGDHEGKGVIVSWVTPDEP----GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
|.+.. ..++++|.|.-+... ..-.|+|.. .+..+..+... +. .-...++|.+|.|++.|.+||..
T Consensus 14 l~v~~-~~~sv~L~W~pP~~~~~~I~gY~vey~~-~~~~W~~~~~~---~~------~~~t~~~v~~L~pg~~Y~FRV~A 82 (108)
T 1v5j_A 14 LVAVR-TPRGVLLHWDPPELVPKRLDGYVLEGRQ-GSQGWEVLDPA---VA------GTETELLVPGLIKDVLYEFRLVA 82 (108)
T ss_dssp EEEEE-CSSSEEEEEECCSCCSSCCCBEEEEEEE-TTCCCEEEEEE---EC------SSCCEEECCCCCTTSCEECCBEE
T ss_pred eEEEE-eCCEEEEEECCCCCCCCCCcEEEEEEEe-CCCCcEEeeee---cC------CCcCEEEeCCCCCCCEEEEEEEE
Confidence 34433 457899999988542 234678887 33334433221 11 11234668999999999999965
Q ss_pred C------CceeeEEEEcCCC
Q 040421 79 G------NATRQFSFTTPPG 92 (407)
Q Consensus 79 ~------~~s~~~~F~T~p~ 92 (407)
- ..|....++|...
T Consensus 83 ~n~~G~s~pS~~~~v~T~~~ 102 (108)
T 1v5j_A 83 FAGSFVSDPSNTANVSTSGL 102 (108)
T ss_dssp EETTEEEEECSCCCCCCSSC
T ss_pred EcCCCCcCCCCCEEEEeCCc
Confidence 2 2345555555543
|
| >1uem_A KIAA1568 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.90 E-value=0.023 Score=43.75 Aligned_cols=61 Identities=16% Similarity=0.169 Sum_probs=36.3
Q ss_pred CCCCCcEEEEEEcCCCCC----CCEEEEeecCC-CCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 7 DHEGKGVIVSWVTPDEPG----SNTVLYWAENS-TLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 7 ~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
....++++|.|....... ...|+|..... ..+..+... .....++|++|+|++.|.|||..
T Consensus 26 ~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~-----------~~~~~~~i~~L~p~t~Y~frV~A 91 (117)
T 1uem_A 26 DVTKNSVTLSWQPGTPGTLPASAYIIEAFSQSVSNSWQTVANH-----------VKTTLYTVRGLRPNTIYLFMVRA 91 (117)
T ss_dssp EECSSCEEEECCCCBCSSSCCCEEEEEEEETTTEEEEEEEEEE-----------ECSSEEEECSCCTTCEEEEEEEE
T ss_pred EecCCEEEEEEeCCCCCCcCceEEEEEEEECCCCCceeEcccc-----------cCcCEEEECCCCCCCEEEEEEEE
Confidence 345678999998764221 24566665431 111111100 01224688999999999999965
|
| >1uen_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, NG-CAM related cell adhesion molecule, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.86 E-value=0.022 Score=44.40 Aligned_cols=79 Identities=25% Similarity=0.376 Sum_probs=45.5
Q ss_pred CCCCcEEEEEEcCCC------CCCCEEEEeecCCCCc---eEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 8 HEGKGVIVSWVTPDE------PGSNTVLYWAENSTLK---QQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 8 ~~~~~~~v~W~t~~~------~~~~~v~y~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
..++++.|.|.-... .....|.|........ .........+. .-...++|++|+|+|.|.++|..
T Consensus 26 ~~~~sv~l~W~~p~~~~~~g~i~gY~v~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~i~~L~p~t~Y~~~V~A 99 (125)
T 1uen_A 26 VNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQ------GSKTHGMLPGLEPFSHYTLNVRV 99 (125)
T ss_dssp EETTEEEEECCCCCHHHHCSCEEEEEEEEEEESCCCCSTTCCCCEEEEEEE------SSCSEEEEESCCSSCEEEEEEEE
T ss_pred cCCcEEEEEEcCCCchhcCceEeEEEEEEEECCCCcccccccccceEEEec------CCccEEEeCCCCCCCEEEEEEEE
Confidence 345789999987631 1124566665543221 00000111111 11346789999999999999954
Q ss_pred ------CCceeeEEEEcCCC
Q 040421 79 ------GNATRQFSFTTPPG 92 (407)
Q Consensus 79 ------~~~s~~~~F~T~p~ 92 (407)
+.+|....|+|.+.
T Consensus 100 ~n~~G~g~~S~~~~~~T~~~ 119 (125)
T 1uen_A 100 VNGKGEGPASPDRVFNTPEG 119 (125)
T ss_dssp EESSCEEEECCCEEEECCCC
T ss_pred ecCCCCCCCCCCEEEECCCC
Confidence 23567778888754
|
| >1x5y_A Myosin binding protein C, fast-type; fast MYBP-C, fibronectin type III domain containing protein, cytoskeleton, muscle contraction; NMR {Mus musculus} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.86 E-value=0.016 Score=44.33 Aligned_cols=66 Identities=21% Similarity=0.199 Sum_probs=39.8
Q ss_pred eeccCCCCCcEEEEEEcCCCC-----CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeC
Q 040421 3 ITQGDHEGKGVIVSWVTPDEP-----GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVG 77 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~-----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~ 77 (407)
|.+.....++++|.|.-.... ....|+|.......+..+. ........++|++|+|++.|.|||.
T Consensus 15 l~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~w~~~~----------~~~~~~~~~~v~~L~p~t~Y~frV~ 84 (111)
T 1x5y_A 15 LTVEDVTDTTTTLKWRPPDRIGAGGIDGYLVEYCLEGSEEWVPAN----------KEPVERCGFTVKDLPTGARILFRVV 84 (111)
T ss_dssp EEEEEECSSEEEEEEECCSCCCSSCCCEEEEEEEETTCCCCEESS----------SSCBSSSEEEEECCCTTCCEEEEEE
T ss_pred CEEEeccCCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEcc----------ccCCcccEEEECCCCCCCEEEEEEE
Confidence 444445678999999976432 2245666665433222110 0011133567899999999999997
Q ss_pred c
Q 040421 78 V 78 (407)
Q Consensus 78 ~ 78 (407)
.
T Consensus 85 A 85 (111)
T 1x5y_A 85 G 85 (111)
T ss_dssp E
T ss_pred E
Confidence 5
|
| >2ocf_D Fibronectin; estrogen receptor, LBD, monobody, estradiol, hormone-growth complex; HET: CME EST; 2.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.85 E-value=0.077 Score=41.45 Aligned_cols=66 Identities=15% Similarity=0.142 Sum_probs=40.4
Q ss_pred eeccCCCCCcEEEEEEcCCCC-CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 3 ITQGDHEGKGVIVSWVTPDEP-GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
|.....+.+++.|.|.-+... ..-.|.|........... -. .. .-...++|+||+|+|.|.++|..
T Consensus 35 l~v~~~t~~Si~lsW~~p~~~i~~Y~V~y~~~~~~~~~~~-~~---v~------~~~t~~~l~gL~P~t~Y~~~V~A 101 (121)
T 2ocf_D 35 LEVVAATPTSLLISWDAPAVTVRYYRITYGETGGNSPVQE-FT---VP------GSKSTATISGLKPGVDYTITVYA 101 (121)
T ss_dssp EEEEEECSSCEEEEEECCSSCCCEEEEEEEETTTCSCBEE-EE---EE------TTCCEEEECCCCTTCEEEEEEEE
T ss_pred cEEEecCCCEEEEEEcCCCCCCcEEEEEEEECCCCCccEE-EE---eC------CCcCEEEeCCCCCCCEEEEEEEE
Confidence 344445678999999876422 235677877654221100 00 01 11236789999999999999965
|
| >1j8k_A Fibronectin; EDA, TYPEIII domain, protein binding; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.77 E-value=0.037 Score=40.80 Aligned_cols=66 Identities=12% Similarity=0.219 Sum_probs=39.9
Q ss_pred eeccCCCCCcEEEEEEcCCCC-CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 3 ITQGDHEGKGVIVSWVTPDEP-GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
|.....+.+++.|+|.-+... ..-.|+|....... ...... ...-...++|+||+|||.|.++|..
T Consensus 8 l~~~~~~~~si~lsW~~p~~~i~~Y~v~y~~~~~~~-------~~~~~~---~~~~~~~~~l~~L~p~t~Y~~~V~A 74 (94)
T 1j8k_A 8 LAFTDVDVDSIKIAWESPQGQVSRYRVTYSSPEDGI-------HELFPA---PDGEEDTAELQGLRPGSEYTVSVVA 74 (94)
T ss_dssp CEEEEEETTEEEEECCCCSSCCSCEEEEEEETTTEE-------EEECCC---CCSSCCEEEECSCCCCSEEEEEEEE
T ss_pred cEEEeecCCEEEEEEcCCCCCcceEEEEEEeCCCCC-------ceEEec---CCCCccEEEeCCCCCCCEEEEEEEE
Confidence 344445568999999765422 23567787654310 000000 0112346789999999999999965
|
| >1uey_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, NG-CAM related cell adhesion molecule, fibronectin type III domain, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.70 E-value=0.14 Score=39.86 Aligned_cols=79 Identities=16% Similarity=0.171 Sum_probs=43.6
Q ss_pred eeccCCCCCcEEEEEEcCCCCCC----CEEEEeecCC--CCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEe
Q 040421 3 ITQGDHEGKGVIVSWVTPDEPGS----NTVLYWAENS--TLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEV 76 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~~~----~~v~y~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v 76 (407)
|.......++++|.|.-...... ..|+|..... ..+.... . .. ... .. .|.+|+|+|.|.+||
T Consensus 23 ~~~~~~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~~w~~~~-~---~~----~~~-~~--~i~~L~p~t~Y~frV 91 (127)
T 1uey_A 23 LELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQT-E---VS----GTQ-TT--AQLNLSPYVNYSFRV 91 (127)
T ss_dssp EEEECCSSSCEEEEEECCCCCSSCEEEEEEEEEBTTTCTTCEEEEE-E---EE----SSC-CE--EEECCCTTCEECCEE
T ss_pred cEEEEccCCEEEEEEECCCCCCCCceEEEEEEEECCCCCCccEEEe-e---eC----CCc-eE--EEecCCCCCEEEEEE
Confidence 34444567899999996533222 3455655432 1222211 1 11 011 11 356999999999999
Q ss_pred Cc------CCceee-EEEEcCCC
Q 040421 77 GV------GNATRQ-FSFTTPPG 92 (407)
Q Consensus 77 ~~------~~~s~~-~~F~T~p~ 92 (407)
.. +.+|.. ..|+|.+.
T Consensus 92 ~A~n~~G~s~~S~~~~~~~T~~~ 114 (127)
T 1uey_A 92 MAVNSIGKSLPSEASEQYLTKAS 114 (127)
T ss_dssp EEEESSCBCCCCSCCCCEECCCS
T ss_pred EEEeCCccCCccccccceEcCCC
Confidence 64 234444 46777653
|
| >1bpv_A Titin, A71, connectin; fibronectin type III; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.69 E-value=0.027 Score=43.44 Aligned_cols=60 Identities=18% Similarity=0.133 Sum_probs=38.1
Q ss_pred CCCcEEEEEEcCCC-----CCCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 9 EGKGVIVSWVTPDE-----PGSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 9 ~~~~~~v~W~t~~~-----~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
..++++|.|..+.. .....|+|...++..+..+.. .......++|+||+|+|.|.|||..
T Consensus 23 ~~~sv~L~W~~P~~~gg~~i~~Y~Ve~~~~~~~~w~~~~~----------~~~~~~~~~v~~L~p~t~Y~frV~A 87 (112)
T 1bpv_A 23 TRHTVTLKWAKPEYTGGFKITSYIVEKRDLPNGRWLKANF----------SNILENEFTVSGLTEDAAYEFRVIA 87 (112)
T ss_dssp ETTEEEEECCCCSCCTTCCCSCCEEEEEETTSCCCEECCC----------SCCCSSEEEECSCCSSCCEEEEEEE
T ss_pred eCCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEeec----------ccCccCEEEECCCCCCCEEEEEEEE
Confidence 56899999995421 234678888765433332210 0011124678999999999999965
|
| >1wfn_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.67 E-value=0.084 Score=40.64 Aligned_cols=66 Identities=21% Similarity=0.269 Sum_probs=39.4
Q ss_pred eeccCCCCCcEEEEEEcCCCCC----CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 3 ITQGDHEGKGVIVSWVTPDEPG----SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
|.......+++.|.|.-..... ...|+|............ . . ......++|++|+|+|.|.+||..
T Consensus 24 l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~-~---~------~~~~~~~~i~~L~p~t~Y~~~V~A 93 (119)
T 1wfn_A 24 LSFSEILDTSLKVSWQEPGEKNGILTGYRISWEEYNRTNTRVTH-Y---L------PNVTLEYRVTGLTALTTYTIEVAA 93 (119)
T ss_dssp CEEESCCSSEEEEECCCCTTCCSCCCEEEEEEEESSCGGGCCCE-E---E------CSSCCEEEEESCCTTCEEEEEEEE
T ss_pred eEEEECCCCEEEEEEcCCCCCCCcEEEEEEEEEECCCCCceEEE-E---e------CCCceEEEEcCCCCCCEEEEEEEE
Confidence 3444556789999998764322 245666655432111000 0 0 112345788999999999999964
|
| >2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A | Back alignment and structure |
|---|
Probab=94.63 E-value=0.055 Score=46.12 Aligned_cols=63 Identities=16% Similarity=0.101 Sum_probs=38.3
Q ss_pred cCCCCCcEEEEEEcCCCC-CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 6 GDHEGKGVIVSWVTPDEP-GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 6 g~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
...+.+++.|+|..+... ....|.|.+......... -.+ . .-...++|+||+|+|.|.++|..
T Consensus 113 ~~~t~~si~l~W~~p~~~i~~Y~v~y~~~~~~~~~~~-~~v---~------~~~t~~~l~gL~p~t~Y~~~V~A 176 (195)
T 2qbw_A 113 VAATPTSLLISWDASYYGVSYYRITYGETGGNSPVQE-FTV---P------YSSSTATISGLKPGVDYTITVYA 176 (195)
T ss_dssp EEEETTEEEEECCCCCSSCSEEEEEEEETTCCSCCEE-EEE---E------TTCSEEEECSCCTTCEEEEEEEE
T ss_pred EeCCCCEEEEEEeCCCCCccEEEEEEEECCCCCcceE-EEe---C------CCCCEEEeCCCCCCCEEEEEEEE
Confidence 334567899999776422 234677876543221110 011 0 11245789999999999999964
|
| >2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A | Back alignment and structure |
|---|
Probab=94.56 E-value=0.16 Score=43.25 Aligned_cols=74 Identities=16% Similarity=0.114 Sum_probs=44.6
Q ss_pred cEEEEEEcCCC-----CCCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc------CC
Q 040421 12 GVIVSWVTPDE-----PGSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV------GN 80 (407)
Q Consensus 12 ~~~v~W~t~~~-----~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~------~~ 80 (407)
+++|.|..+.. ...-.|+|.......+....-.. .........+|++|+|+|.|.|||.. +.
T Consensus 23 s~~l~W~~p~~~~g~~i~~Y~v~~~~~~~~~~~~~~~~~-------~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~~~ 95 (209)
T 2vkw_A 23 TAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDA-------KEASMEGIVTIVGLKPETTYAVRLAALNGKGLGE 95 (209)
T ss_dssp CEEEEEECCSCCCSSCCCEEEEEEEESSCCCCEEEEEEH-------HHHHHHSEEEECCCCTTCEEEEEEEEEETTEECC
T ss_pred eEEEEEcCCCcCCCcceeEEEEEEeeCCCCCceEeEeec-------cCCCccceEEeCCCCCCCeEEEEEEEEcCCcccC
Confidence 68999998731 22345777766543332221100 00011235778999999999999954 23
Q ss_pred ceeeEEEEcCCC
Q 040421 81 ATRQFSFTTPPG 92 (407)
Q Consensus 81 ~s~~~~F~T~p~ 92 (407)
+|....|+|.+.
T Consensus 96 ~s~~~~~~T~~~ 107 (209)
T 2vkw_A 96 ISAASEFKTQPV 107 (209)
T ss_dssp CCCCEEEECCCS
T ss_pred CcccccccccCC
Confidence 556667888754
|
| >3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A | Back alignment and structure |
|---|
Probab=94.33 E-value=0.22 Score=44.77 Aligned_cols=89 Identities=16% Similarity=0.085 Sum_probs=51.0
Q ss_pred eeccCCCCCcEEEEEEcCCCC-CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCcC--
Q 040421 3 ITQGDHEGKGVIVSWVTPDEP-GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGVG-- 79 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~~-- 79 (407)
|.......+++.|.|...... ..-.|+|............ .. ..-...+.|++|+|++.|.++|..-
T Consensus 27 l~~~~~~~~sv~l~W~~p~~~~~~Y~v~~~~~~~~~~~~~~----~~------~~~~~~~~i~~L~p~t~Y~~~V~a~~~ 96 (290)
T 3r8q_A 27 LKFTQVTPTSLSAQWTPPNVQLTGYRVRVTPKEKTGPMKEI----NL------APDSSSVVVSGLMVATKYEVSVYALKD 96 (290)
T ss_dssp EEEEEECSSCEEEEEECCSSCCCEEEEEEEESSSSSCCEEE----EE------CTTCCEEEECSCCSSCEEEEEEEEEET
T ss_pred eEEEECCCCEEEEEEeCCCCCeeEEEEEEEeCCCCCceEEE----Ec------CCCccEEEeCCCCCCCEEEEEEEEEeC
Confidence 344444678999999987532 3356777775532221111 00 0113457889999999999999642
Q ss_pred ----CceeeEEEEcCCCCCCCCCcEEE
Q 040421 80 ----NATRQFSFTTPPGVGPDVPYTFG 102 (407)
Q Consensus 80 ----~~s~~~~F~T~p~~~~~~~~~f~ 102 (407)
..+ ...++|.+.+.....+++.
T Consensus 97 ~g~s~~s-~~~~~t~~~~~~P~~l~~~ 122 (290)
T 3r8q_A 97 TLTSRPA-QGVVTTLENVSPPRRARVT 122 (290)
T ss_dssp TEECCCE-EEEEECCCCCCCCEEEEEE
T ss_pred CCCCCCc-ceeEecCCCCCCCceeEEE
Confidence 122 3467776543322334444
|
| >1wf5_A Sidekick 2 protein; FNIII domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=94.20 E-value=0.063 Score=41.42 Aligned_cols=65 Identities=14% Similarity=0.149 Sum_probs=38.3
Q ss_pred eccCCCCCcEEEEEEcCCCCCC----CEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 4 TQGDHEGKGVIVSWVTPDEPGS----NTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 4 ~~g~~~~~~~~v~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
.......++++|.|.-...... ..|+|.... ..+..... ........++|++|+|++.|.|||..
T Consensus 27 ~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~-~~~~~~~~---------~~~~~~~~~~v~~L~p~t~Y~frV~A 95 (121)
T 1wf5_A 27 TLSTVERRAINLTWTKPFDGNSPLIRYILEMSENN-APWTVLLA---------SVDPKATSVTVKGLVPARSYQFRLCA 95 (121)
T ss_dssp EECSSSTTEEEEECCCCCCCSSCEEEEEEEEECTT-CCCEEEES---------SCCTTCCEEEEESCCTTCEEEEEEEE
T ss_pred eeEeccCCEEEEEEcCCCCCCCcceEEEEEEEcCC-CCceEeEc---------ccCCCccEEEECCcCCCCEEEEEEEE
Confidence 3445567899999987643332 345555543 12221100 01112335788999999999999965
|
| >3n06_B PRL-R, prolactin receptor; PH dependence, hematopoietic cytokine, hormone-hormone recep complex; 2.00A {Homo sapiens} PDB: 3mzg_B 3n0p_B 3ncb_B 1bp3_B 3d48_R 3nce_B 3ncc_B 3ncf_B 3ew3_B 3npz_B 1f6f_B 2lfg_A | Back alignment and structure |
|---|
Probab=94.08 E-value=0.17 Score=43.20 Aligned_cols=70 Identities=13% Similarity=0.087 Sum_probs=46.3
Q ss_pred CCcEEEEEEcCCCCC--------CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc---
Q 040421 10 GKGVIVSWVTPDEPG--------SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV--- 78 (407)
Q Consensus 10 ~~~~~v~W~t~~~~~--------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~--- 78 (407)
.+++.|.|..+.... .-.|+|....+..+.... . .......|.+|+|+|.|..||..
T Consensus 120 ~~~l~l~W~~p~~~~~~~g~~~~~Y~v~y~~~~~~~~~~~~------~------~~~~~~~l~~L~p~t~Y~v~Vra~~~ 187 (210)
T 3n06_B 120 KPYLWIKWSPPTLIDLKTGWFTLLYEIRLKPEKAAEWEIHF------A------GQQTEFKILSLHPGQKYLVQVRCKPD 187 (210)
T ss_dssp CCEEEEEEECCTTCCCTTSSCCEEEEEEEECTTCSSCEEEE------E------ETCSEEEECCCCTTCEEEEEEEEEES
T ss_pred CceEEEEcCCCCCccccCCeEEEEEEEEEecCCCCCCEEEe------c------cCceEEEEeccCCCCEEEEEEEEecC
Confidence 578999999875322 235677776543332211 0 01235678999999999999953
Q ss_pred ----CCceeeEEEEcCC
Q 040421 79 ----GNATRQFSFTTPP 91 (407)
Q Consensus 79 ----~~~s~~~~F~T~p 91 (407)
+.||....|+|+.
T Consensus 188 ~g~wS~wS~~~~~~Tp~ 204 (210)
T 3n06_B 188 HGYWSAWSPATFIQIPS 204 (210)
T ss_dssp SSCCCCCCCCEEEECCT
T ss_pred CCcccCCCCceeEECcC
Confidence 2578889999963
|
| >1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A | Back alignment and structure |
|---|
Probab=94.05 E-value=0.055 Score=46.42 Aligned_cols=75 Identities=17% Similarity=0.209 Sum_probs=45.9
Q ss_pred CCCcEEEEEEcCCCCC----CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc------
Q 040421 9 EGKGVIVSWVTPDEPG----SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV------ 78 (407)
Q Consensus 9 ~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~------ 78 (407)
..+++.|.|..+.... .-.|+|....+..+..+.. . ........++|++|+|+|.|.+||..
T Consensus 118 ~~~sv~l~W~~p~~~~~~i~~Y~v~y~~~~~~~~~~~~~-------~-~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~ 189 (215)
T 1bqu_A 118 LSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPP-------E-DTASTRSSFTVQDLKPFTEYVFRIRCMKEDGK 189 (215)
T ss_dssp CCSCEEEEEECCGGGGTSCEEEEEEEEETTCSSCEECCG-------G-GGCSCCSEEEECSCCSSEEEEEEEEEEETTSC
T ss_pred CCceEEEEEeCCCCCCcceEEEEEEEccCCCCCceEecc-------c-cccCccceEEeCCCCCCCEEEEEEEEccCCCC
Confidence 5689999999764321 2467777665333321110 0 00112235789999999999999954
Q ss_pred C---CceeeEEEEcCC
Q 040421 79 G---NATRQFSFTTPP 91 (407)
Q Consensus 79 ~---~~s~~~~F~T~p 91 (407)
+ .+|....++|.+
T Consensus 190 g~~S~~S~~~~~~T~~ 205 (215)
T 1bqu_A 190 GYWSDWSEEASGITYE 205 (215)
T ss_dssp SCCCCCCCCEEEEECC
T ss_pred CccCCCCCcccccccc
Confidence 2 256677888865
|
| >2yux_A Myosin-binding protein C, SLOW-type; fibronectin III domain, structural genomics., NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.01 E-value=0.049 Score=42.27 Aligned_cols=61 Identities=20% Similarity=0.254 Sum_probs=39.2
Q ss_pred CCCCcEEEEEEcCCCC-----CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCcC
Q 040421 8 HEGKGVIVSWVTPDEP-----GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGVG 79 (407)
Q Consensus 8 ~~~~~~~v~W~t~~~~-----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~~ 79 (407)
...++++|.|..+... ..-.|+|.......+..+.. ......++|++|+|++.|.|||..-
T Consensus 29 ~~~~sv~l~W~~p~~~gg~~i~~Y~v~~~~~~~~~w~~~~~-----------~~~~~~~~v~~L~p~t~Y~frV~A~ 94 (120)
T 2yux_A 29 VWGENVALTWTPPKDDGNAAITGYTIQKADKKSMEWFTVIE-----------HYHRTSATITELVIGNEYYFRVFSE 94 (120)
T ss_dssp EETTEEEEEECCCSCCCSSCCCCCCEEEEETTTCCCEEEES-----------SCCSSCCEECCCCSSEEEEEEECCC
T ss_pred ecCCEEEEEEcCCCcCCCCCceEEEEEEEECCCCceEEeee-----------cCCcCEEEECCCCCCCEEEEEEEEe
Confidence 3467899999876422 23567787765444432210 0112245789999999999999763
|
| >2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=93.80 E-value=0.2 Score=42.37 Aligned_cols=66 Identities=14% Similarity=0.167 Sum_probs=41.5
Q ss_pred eeeccCCC--CCcEEEEEEcCC--CCCCCEEEEeecCCC-CceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEe
Q 040421 2 HITQGDHE--GKGVIVSWVTPD--EPGSNTVLYWAENST-LKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEV 76 (407)
Q Consensus 2 ~l~~g~~~--~~~~~v~W~t~~--~~~~~~v~y~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v 76 (407)
.|.+.+.. +++++|.|..+. ......|+|...... .+.... +. .-...++|+||+|+|.|.++|
T Consensus 5 ~l~v~~v~~~~~si~l~W~~p~~~~i~~Y~v~~~~~~~~~~~~~~~-----~~------~~~~~~~i~~L~p~t~Y~~~V 73 (201)
T 2ha1_A 5 EVFITETPSQPNSHPIQWNAPQPSHISKYILRWRPKNSVGRWKEAT-----IP------GHLNSYTIKGLKPGVVYEGQL 73 (201)
T ss_dssp EEECCSCSCCSSCEEEEEECCSSTTCCEEEEEEEETTCSSCCEEEE-----EC------TTCCEEEECSCCTTEEEEEEE
T ss_pred eEEEEecCCCCCEEEEEEeCCCCCCceEEEEEEEECCCCCceEEEe-----cC------CCccEEEecCCCCCCEEEEEE
Confidence 35555544 789999999873 123456778765432 222111 11 112357899999999999999
Q ss_pred Cc
Q 040421 77 GV 78 (407)
Q Consensus 77 ~~ 78 (407)
..
T Consensus 74 ~a 75 (201)
T 2ha1_A 74 IS 75 (201)
T ss_dssp EE
T ss_pred EE
Confidence 65
|
| >3mpc_A FN3-like protein; fibronectin, FN(III), unknown function; 1.60A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=93.79 E-value=0.14 Score=38.74 Aligned_cols=57 Identities=18% Similarity=0.253 Sum_probs=33.4
Q ss_pred CCcEEEEEEcCCCCCCCEEEEeecCC-CCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 10 GKGVIVSWVTPDEPGSNTVLYWAENS-TLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 10 ~~~~~v~W~t~~~~~~~~v~y~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
.+++.|+|..... ......|+.... .....+ +.. .. .. ..+.++|++|++|+|+|..
T Consensus 19 ~~~v~LsW~~~~~-~~~Y~VyR~~~~~~~~~~i-~~~--~~----~t----sy~d~~l~~g~~Y~Y~V~A 76 (103)
T 3mpc_A 19 GNTANLTWNAAPG-ANSYNVKRSTKSGGPYTTI-ATN--IT----ST----NYTDTGVATGTKYYYVVSA 76 (103)
T ss_dssp SCCEEEEEECCTT-CSEEEEEEESSTTCCCEEE-EEE--EC----SS----EEEETTCCTTCCCEEEEEE
T ss_pred CCEEEEEEECCCC-CCEEEEEEecCCCCCcEEE-eec--CC----CC----EEEECCCCCCCEEEEEEEE
Confidence 4689999998654 345555655432 212221 110 00 11 1245899999999999964
|
| >1cd9_B G-CSF-R, protein (G-CSF receptor); class1 cytokine, hematopoietic receptor, signal transduction cytokine; HET: NAG; 2.80A {Mus musculus} SCOP: b.1.2.1 b.1.2.1 PDB: 1pgr_B 1cto_A 1gcf_A | Back alignment and structure |
|---|
Probab=93.75 E-value=0.27 Score=41.97 Aligned_cols=73 Identities=8% Similarity=0.064 Sum_probs=47.1
Q ss_pred CCCcEEEEEEcCCCCC----CCEEEEe-ecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc-----
Q 040421 9 EGKGVIVSWVTPDEPG----SNTVLYW-AENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV----- 78 (407)
Q Consensus 9 ~~~~~~v~W~t~~~~~----~~~v~y~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~----- 78 (407)
..+++.|.|..+...+ .-.|+|. ...+..+..+... . .....+.|.+|+|+|.|..||..
T Consensus 127 ~~~~~~l~W~~p~~~~~~~l~Y~v~y~~~~~~~~w~~~~~~----~------~~~~~~~l~~L~p~t~Y~~~Vra~~~~g 196 (215)
T 1cd9_B 127 QPGCLWLSWKPWKPSEYMEQECELRYQPQLKGANWTLVFHL----P------SSKDQFELCGLHQAPVYTLQMRCIRSSL 196 (215)
T ss_dssp CCSCEEEEEECCGGGTTSCEEEEEEEEESSTTCCCEEEEEE----E------SCEEEEEECCCCSCSCEEEEEEEEESSS
T ss_pred CCCeEEEEEeCCCCCCeEEEEEEEEEccCCCCCCcEEEecc----c------CcceEEEEcCCCCCCEEEEEEEeeECCC
Confidence 4678999999874321 3467787 4444333322111 0 12345789999999999999953
Q ss_pred -C---CceeeEEEEcCC
Q 040421 79 -G---NATRQFSFTTPP 91 (407)
Q Consensus 79 -~---~~s~~~~F~T~p 91 (407)
+ .||....|+|+.
T Consensus 197 ~G~wS~wS~~~~~~T~e 213 (215)
T 1cd9_B 197 PGFWSPWSPGLQLRPTM 213 (215)
T ss_dssp CCCCCCCCCCEEECCCC
T ss_pred CCCCcCCCCccceecCC
Confidence 2 367888888864
|
| >3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=93.66 E-value=0.17 Score=42.25 Aligned_cols=65 Identities=12% Similarity=0.142 Sum_probs=40.8
Q ss_pred eeccCCCCCcEEEEEEcCCCC-----CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeC
Q 040421 3 ITQGDHEGKGVIVSWVTPDEP-----GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVG 77 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~-----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~ 77 (407)
|.......++++|.|...... ..-.|+|.......+...... .-...+.|++|+|+|.|.|+|.
T Consensus 12 l~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~-----------~~~~~~~~~~L~p~t~Y~~~V~ 80 (197)
T 3lpw_A 12 LKVKEVTKTSVTLTWDPPLLDGGSKIKNYIVEKRESTRKAYSTVATN-----------CHKTSWKVDQLQEGCSYYFRVL 80 (197)
T ss_dssp EEEEEECSSCEEEEEECCSCCTTSCCCEEEEEEEETTCSSCEEEEEE-----------ECSSEEEECCCCTTCEEEEEEE
T ss_pred cEEEEecCCEEEEEEcCCccCCCCcccEEEEEEEECCCCccEEeecC-----------CCccEEEEcCCCCCCEEEEEEE
Confidence 333344568999999986421 234677777654333322211 0123467899999999999996
Q ss_pred c
Q 040421 78 V 78 (407)
Q Consensus 78 ~ 78 (407)
.
T Consensus 81 a 81 (197)
T 3lpw_A 81 A 81 (197)
T ss_dssp E
T ss_pred E
Confidence 4
|
| >3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A | Back alignment and structure |
|---|
Probab=93.56 E-value=0.12 Score=44.10 Aligned_cols=73 Identities=25% Similarity=0.439 Sum_probs=44.3
Q ss_pred CCcEEEEEEcCCCCC----CCEEEEeecCCCCce-EEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc------
Q 040421 10 GKGVIVSWVTPDEPG----SNTVLYWAENSTLKQ-QAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV------ 78 (407)
Q Consensus 10 ~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~------ 78 (407)
.+++.|.|.-+.... .-.|+|......... ...... . .-...++|++|+|++.|.++|..
T Consensus 121 ~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~---~------~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~ 191 (211)
T 3p4l_A 121 PKTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHDWVIEPV---V------GNRLTHQIQELTLDTPYYFKIQARNSKGM 191 (211)
T ss_dssp EEEEEEEEECCTTCCSCCCEEEEEEESCTTSCGGGSEEEEE---E------SSCSEEEECCCCTTCEEEEEEEEEETTEE
T ss_pred CCEEEEEECCCCCCCCCEEEEEEEEEECCCCCCCceEEEEe---c------CCeeEEEEcCCCCCCEEEEEEEEEcCCcc
Confidence 578999999764321 246667665443211 011111 0 11335788999999999999954
Q ss_pred CCceeeEEEEcCC
Q 040421 79 GNATRQFSFTTPP 91 (407)
Q Consensus 79 ~~~s~~~~F~T~p 91 (407)
+.+|....|+|..
T Consensus 192 g~~S~~v~~~~~~ 204 (211)
T 3p4l_A 192 GPMSEAVQFRTPK 204 (211)
T ss_dssp CCCCCCEEEECC-
T ss_pred CCCCCCEEccCcc
Confidence 3567777888764
|
| >1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=93.55 E-value=0.37 Score=42.99 Aligned_cols=90 Identities=11% Similarity=0.081 Sum_probs=50.0
Q ss_pred cCCCCCcEEEEEEcCCCC-CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCcC---Cc
Q 040421 6 GDHEGKGVIVSWVTPDEP-GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGVG---NA 81 (407)
Q Consensus 6 g~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~~---~~ 81 (407)
.....++++|.|.-.... ....|+|............-. . ...-...+.|++|+|++.|.++|..- +.
T Consensus 114 ~~~~~~sv~l~W~~p~~~i~~Y~v~~~~~~~~~~~~~~~~-------~-~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~ 185 (283)
T 1tdq_A 114 GSRTATSLDLEWDNSEAEAQEYKVVYSTLAGEQYHEVLVP-------K-GIGPTTKTTLTDLVPGTEYGVGISAVMNSKQ 185 (283)
T ss_dssp EEECSSCEEEEEECCSSCCSEEEEEEEETTCCCCEEEEEE-------C-CSSSEEEEEECSCCTTCEEEEEEEEEETTEE
T ss_pred EecCCCeEEEEecCCCCCccEEEEEEEeCCCCcceEEECC-------C-CCcccceEEEecCCCCCEEEEEEEEEeCCCC
Confidence 334567899999987432 345677776544222111110 0 00114567889999999999999652 22
Q ss_pred e--eeEEEEcCCCCCCCCCcEEEEEe
Q 040421 82 T--RQFSFTTPPGVGPDVPYTFGLIG 105 (407)
Q Consensus 82 s--~~~~F~T~p~~~~~~~~~f~~~g 105 (407)
+ ....+.|.|.+ ...+++...+
T Consensus 186 s~~~~~~~~t~~~~--P~~l~~~~~~ 209 (283)
T 1tdq_A 186 SIPATMNARTELDS--PRDLMVTASS 209 (283)
T ss_dssp CCCEEEEEECCCCC--CEEEEEEEEC
T ss_pred CcceEEEecCCCCC--CCccEEeEec
Confidence 2 23455565542 2344444433
|
| >2w1n_A O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrolase, fibronectin type-III, beta-N-acetylglucosaminidase, cohesin, hydrolase; 1.80A {Clostridium perfringens} | Back alignment and structure |
|---|
Probab=93.51 E-value=0.14 Score=44.08 Aligned_cols=74 Identities=18% Similarity=0.326 Sum_probs=41.5
Q ss_pred eccCCCCCcEEEEEEcCCCCCCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc----C
Q 040421 4 TQGDHEGKGVIVSWVTPDEPGSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV----G 79 (407)
Q Consensus 4 ~~g~~~~~~~~v~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~----~ 79 (407)
...+.++++++++|..+.. ..+.-.|..--+. ... ++.. ... ...+++||+|+|.|.|+|.. |
T Consensus 158 ~At~VT~tSVtLsW~aP~~-~~GI~gY~ly~~g-~~v--~~v~-------~~~--tsyt~~gLk~~TeYsF~V~A~d~~G 224 (238)
T 2w1n_A 158 KASEINKKNVTVTWTEPET-TEGLEGYILYKDG-KKV--AEIG-------KDE--TSYTFKKLNRHTIYNFKIAAKYSNG 224 (238)
T ss_dssp EEEEECSSCEEEEEECCSC-CTTEEEEEEEETT-EEE--EEEE-------TTC--CEEEECSCCTTCEEEEEEEEEETTS
T ss_pred EEEEccCCeEEEEecCCCC-CCCceeEEEEeCC-cee--EEee-------ccc--eEEEecCCCCCCEEEEEEEEEeCCC
Confidence 3344578999999999854 3333334332211 111 1111 001 12467999999999999964 2
Q ss_pred C--ceeeEEEEcC
Q 040421 80 N--ATRQFSFTTP 90 (407)
Q Consensus 80 ~--~s~~~~F~T~ 90 (407)
. ......++|.
T Consensus 225 ~~Ss~e~vtVrTl 237 (238)
T 2w1n_A 225 EVSSKESLTLRTA 237 (238)
T ss_dssp CBCCCEEEEEECC
T ss_pred CccccCcEEEEec
Confidence 1 2355566664
|
| >3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A* | Back alignment and structure |
|---|
Probab=93.48 E-value=0.15 Score=50.82 Aligned_cols=71 Identities=23% Similarity=0.314 Sum_probs=44.5
Q ss_pred CCCcEEEEEEcCCCCC----CCEEEEeecCCCC-ceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc-----
Q 040421 9 EGKGVIVSWVTPDEPG----SNTVLYWAENSTL-KQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV----- 78 (407)
Q Consensus 9 ~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~----- 78 (407)
.+++++|.|..+..+. .-.|+|....... ..... .-...++|+||+|+|.|.++|..
T Consensus 453 s~tSV~LsW~pP~~~ng~I~~Y~V~y~~~~~~~~~~~v~-------------~~~ts~~l~gL~P~T~Y~frVrA~n~~G 519 (536)
T 3fl7_A 453 STTSLSVSWSIPPPQQSRVWKYEVTYRKKGDSNSYNVRR-------------TEGFSVTLDDLAPDTTYLVQVQALTQEG 519 (536)
T ss_dssp CC-CCEEEEECCTTTTTTCSEEEEEEEEC--CCCCEEEE-------------ESSSEEECCSCCSSCEEEEEEEEECC--
T ss_pred cCCeEEEEEECCcCCCCcccEEEEEEEECCCCceEEEEc-------------CCCCEEEECCCCCCCEEEEEEEEEcCCc
Confidence 4678999999764322 2467777655431 11111 11234689999999999999954
Q ss_pred -CCceeeEEEEcCCC
Q 040421 79 -GNATRQFSFTTPPG 92 (407)
Q Consensus 79 -~~~s~~~~F~T~p~ 92 (407)
+.+|....|+|++.
T Consensus 520 ~Gp~S~~v~~~T~~~ 534 (536)
T 3fl7_A 520 QGAGSKVHEFQTLSP 534 (536)
T ss_dssp -CEECCCEEEECCC-
T ss_pred ccCCCCCEEEEeCCC
Confidence 24678889999764
|
| >3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B | Back alignment and structure |
|---|
Probab=93.39 E-value=0.18 Score=47.15 Aligned_cols=67 Identities=15% Similarity=0.196 Sum_probs=41.0
Q ss_pred eeccCCCCC-cEEEEEEcCC--CCCCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 3 ITQGDHEGK-GVIVSWVTPD--EPGSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 3 l~~g~~~~~-~~~v~W~t~~--~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
|.......+ ++.|.|.-.. ....-.|+|............... . .-...+.|++|+|+|.|.++|..
T Consensus 9 l~~~~~~~~~sv~l~W~~~~~~~~~~Y~v~~~~~~~~~~~~~~~~~---~------~~~~~~~i~~L~p~t~Y~~~V~a 78 (375)
T 3t1w_A 9 LHLEANPDTGVLTVSWERSTTPDITGYRITTTPTNGQQGNSLEEVV---H------ADQSSCTFDNLSPGLEYNVSVYT 78 (375)
T ss_dssp EEEEEETTTTEEEEEEECCSCSSCCEEEEEEEETTCTTSCCEEEEE---E------TTCCEEEECCCCTTCCEEEEEEE
T ss_pred cEEEecCCCeEEEEEEeCCCCCCeeeEEEEEEECCCCCCcceeEEc---C------CCccEEEEcCCcCCCEEEEEEEE
Confidence 344444567 8999999874 233457778775542211111111 0 11345678999999999999965
|
| >3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=93.26 E-value=0.19 Score=42.83 Aligned_cols=78 Identities=18% Similarity=0.188 Sum_probs=45.6
Q ss_pred CCcEEEEEEcCCCC-CCC----EEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc------
Q 040421 10 GKGVIVSWVTPDEP-GSN----TVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV------ 78 (407)
Q Consensus 10 ~~~~~v~W~t~~~~-~~~----~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~------ 78 (407)
..++++.|..+... +.+ .|+|...+...+....-... ....-...+|.+|+|++.|.|||..
T Consensus 126 ~~~~~l~w~~p~~~~~~pi~~y~v~~~~~~~~~w~~~~~~~~-------~~~~~~~l~i~~L~~~~~y~~~~~A~N~~G~ 198 (215)
T 3mtr_A 126 SSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAK-------EASMEGIVTIVGLKPETTYAVRLAALNGKGL 198 (215)
T ss_dssp TTEEEEEEECCSCCCSSCEEEEEEEEEETTCCCCEEEEEEHH-------HHHHHTEEEEECCCTTCEEEEEEEEEESSCB
T ss_pred cceEEEEEecCCccCCCceEEEEEEEEECCCCcccccccccc-------cccccccEEECCCCCCCEEEEEEEEEeCCcc
Confidence 46789999854321 112 46777666543332211100 0001145779999999999999954
Q ss_pred CCceeeEEEEcCCCCC
Q 040421 79 GNATRQFSFTTPPGVG 94 (407)
Q Consensus 79 ~~~s~~~~F~T~p~~~ 94 (407)
+.+|....|+|+|..+
T Consensus 199 s~~S~~~~v~T~p~~g 214 (215)
T 3mtr_A 199 GEISAASEFKTQPVQG 214 (215)
T ss_dssp CCCCCCEEEECCC---
T ss_pred cCcccceeeEeccccC
Confidence 2457788899988643
|
| >1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=93.24 E-value=0.37 Score=39.99 Aligned_cols=78 Identities=13% Similarity=0.167 Sum_probs=46.7
Q ss_pred eeccCCCCCcEEEEEEcCCCC-CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCcC--
Q 040421 3 ITQGDHEGKGVIVSWVTPDEP-GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGVG-- 79 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~~-- 79 (407)
|.......++++|.|.-+... ..-.|+|..... ..... ... .-...+.|++|+|+|.|.++|..-
T Consensus 13 l~~~~~~~~sv~l~W~~p~~~i~~Y~v~~~~~~~-~~~~~-----~~~------~~~~~~~i~~L~p~t~Y~~~V~a~~~ 80 (186)
T 1qr4_A 13 LEVSDPTETTLSLRWRRPVAKFDRYRLTYVSPSG-KKNEM-----EIP------VDSTSFILRGLDAGTEYTISLVAEKG 80 (186)
T ss_dssp EEEESCCSSEEEEEEECCSSCCSEEEEEEECTTC-CEEEE-----EEC------TTCSEEEEESCCSSCEEEEEEEEESS
T ss_pred eEEEecCCCEEEEEEeCCCCCccEEEEEEEeCCC-CeeEE-----ECC------CCCCEEEECCCCCCCEEEEEEEEEcC
Confidence 455566778999999986432 245677764332 11110 110 112246789999999999999652
Q ss_pred -Cce--eeEEEEcCCC
Q 040421 80 -NAT--RQFSFTTPPG 92 (407)
Q Consensus 80 -~~s--~~~~F~T~p~ 92 (407)
+.+ ....++|.|.
T Consensus 81 ~~~s~~~~~~~~t~p~ 96 (186)
T 1qr4_A 81 RHKSKPTTIKGSTVVG 96 (186)
T ss_dssp SCBCCCEEEEEECCCC
T ss_pred CccCCCEEEEEECCCC
Confidence 222 3456777654
|
| >1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A | Back alignment and structure |
|---|
Probab=93.13 E-value=0.12 Score=47.08 Aligned_cols=75 Identities=17% Similarity=0.209 Sum_probs=47.4
Q ss_pred CCCcEEEEEEcCCCCC----CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc------
Q 040421 9 EGKGVIVSWVTPDEPG----SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV------ 78 (407)
Q Consensus 9 ~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~------ 78 (407)
.++++.|.|..+.... .-.|+|....+..+..+.. . ....-....+|++|+|+|.|.+||..
T Consensus 214 ~~~sv~l~W~~p~~~~~~i~~Y~v~y~~~~~~~w~~~~~-------~-~~~~~~~~~~l~~L~p~t~Y~~rV~A~n~~G~ 285 (303)
T 1i1r_A 214 LSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPP-------E-DTASTRSSFTVQDLKPFTEYVFRIRCMKEDGK 285 (303)
T ss_dssp SSSCEEEEEECCGGGGTSCEEEEEEEEETTCSSCEECCG-------G-GGCSCCSEEEECSCCTTCEEEEEEEEEETTSC
T ss_pred CCCEEEEEECCCCCCCcccEEEEEEEEeCCCCCceEEcc-------c-cCCCceeEEEeCCCCCCCEEEEEEEeccCCCC
Confidence 5689999999874321 2467777765433322110 0 00112235789999999999999953
Q ss_pred C---CceeeEEEEcCC
Q 040421 79 G---NATRQFSFTTPP 91 (407)
Q Consensus 79 ~---~~s~~~~F~T~p 91 (407)
+ .||....|+|+.
T Consensus 286 G~~S~wS~~~~~~T~e 301 (303)
T 1i1r_A 286 GYWSDWSEEASGITYE 301 (303)
T ss_dssp SCCCCCCCCEEEECCC
T ss_pred CCcCCCCCccceeCCc
Confidence 2 357788898864
|
| >2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A | Back alignment and structure |
|---|
Probab=93.11 E-value=0.16 Score=47.54 Aligned_cols=74 Identities=20% Similarity=0.341 Sum_probs=42.0
Q ss_pred CCCcEEEEEEcCCCCC----CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc------
Q 040421 9 EGKGVIVSWVTPDEPG----SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV------ 78 (407)
Q Consensus 9 ~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~------ 78 (407)
..++++|.|.-..... ...|+|.......+.... . . ..-....+|++|+|+|.|.+||..
T Consensus 305 ~~~~v~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~-~---~------~~~~~~~~i~~L~~~t~Y~~~V~A~n~~G~ 374 (389)
T 2jll_A 305 SGKSFKLSITKQDDGGAPILEYIVKYRSKDKEDQWLEK-K---V------QGNKDHIILEHLQWTMGYEVQITAANRLGY 374 (389)
T ss_dssp TTTEEEEEECCCCCCSSCCCEEEEEEEC-----CCBCC-E---E------CTTCCEEEECSCCTTCEEEEEEEEEC-CCB
T ss_pred cCCEEEEEEECCCCCCCcccEEEEEEEeCCCCcceeEe-e---c------cCCcceEEeCCcCCCCEEEEEEEEEcCCcC
Confidence 4678999998653222 245666653322111000 0 0 111234678999999999999964
Q ss_pred CCceeeEEEEcCCCC
Q 040421 79 GNATRQFSFTTPPGV 93 (407)
Q Consensus 79 ~~~s~~~~F~T~p~~ 93 (407)
+..| ...|+|++.+
T Consensus 375 s~~s-~~~~~T~~~P 388 (389)
T 2jll_A 375 SEPT-VYEFSMPPKP 388 (389)
T ss_dssp CCCE-EEEEECCCCC
T ss_pred CCce-eeEecCCCCC
Confidence 2344 3489998764
|
| >1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=93.03 E-value=0.39 Score=42.83 Aligned_cols=92 Identities=14% Similarity=0.153 Sum_probs=52.3
Q ss_pred eeccCCCCCcEEEEEEcCC-CCCCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCcC--
Q 040421 3 ITQGDHEGKGVIVSWVTPD-EPGSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGVG-- 79 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~-~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~~-- 79 (407)
|.......++++|.|.-.. ....-.|+|........... ... ......+.|++|+|++.|.++|..-
T Consensus 21 l~~~~~~~~sv~l~W~~~~~~~~~Y~v~~~~~~~~~~~~~----~~~------~~~~~~~~i~~L~p~t~Y~~~V~a~~~ 90 (283)
T 1tdq_A 21 ILVRDVSDTVAFVEWTPPRAKVDFILLKYGLVGGEGGKTT----FRL------QPPLSQYSVQALRPGSRYEVSISAVRG 90 (283)
T ss_dssp EEEEEECSSCEEEEEECCSSCCSEEEEEEEESSSSCCCEE----EEE------CTTCSEEEECSCCTTCEEEEEEEEEET
T ss_pred EEEEecCCCeEEEEEECCCCceeEEEEEEEEecCCCCcEE----EEe------CCCCCEEEecCCCCCCEEEEEEEEECC
Confidence 3344445689999999875 22345777865432211100 011 1123356889999999999999652
Q ss_pred -C--ceeeEEEEcCCCCCCCCCcEEEEEec
Q 040421 80 -N--ATRQFSFTTPPGVGPDVPYTFGLIGD 106 (407)
Q Consensus 80 -~--~s~~~~F~T~p~~~~~~~~~f~~~gD 106 (407)
+ .+....|.|+|.+ ...+++...++
T Consensus 91 ~g~s~~~~~~~~t~p~~--P~~l~~~~~~~ 118 (283)
T 1tdq_A 91 TNESDASSTQFTTEIDA--PKNLRVGSRTA 118 (283)
T ss_dssp TEECCCEEEEEECCCCC--CEEEEEEEECS
T ss_pred CCCCCCeeEEEECCCCC--CCceEEEecCC
Confidence 1 2234567786643 23455444333
|
| >1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=92.96 E-value=0.28 Score=41.50 Aligned_cols=74 Identities=16% Similarity=0.124 Sum_probs=43.6
Q ss_pred CCCCCcEEEEEEcCC--C----CCCCEEEEeecCCCC-ceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc-
Q 040421 7 DHEGKGVIVSWVTPD--E----PGSNTVLYWAENSTL-KQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV- 78 (407)
Q Consensus 7 ~~~~~~~~v~W~t~~--~----~~~~~v~y~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~- 78 (407)
....+++.|.|.... . ...-.|.|....... +.... . ........+|++|+|+|.|.++|..
T Consensus 115 ~~~~~sv~l~W~~p~~~~~ng~i~~Y~v~~~~~~~~~~~~~~~--~--------~~~~~~~~~i~~L~p~t~Y~~~V~A~ 184 (205)
T 1cfb_A 115 GTEPNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWENNN--I--------FDWRQNNIVIADQPTFVKYLIKVVAI 184 (205)
T ss_dssp CSSTTCEEEECCCCCGGGTCSSSCEEEEEEEESSTTCCCEEEE--E--------CCTTCCEEEECSCCSSCEEEEEEEEE
T ss_pred cCCCCeEEEEEECCCccccCCCceEEEEEEEECCCCCCcEEEE--e--------cCCCccEEEEcCCCCCcEEEEEEEEE
Confidence 344678999998764 1 123467777665432 21111 0 0011245678999999999999964
Q ss_pred -----CC-ceeeEEEEcC
Q 040421 79 -----GN-ATRQFSFTTP 90 (407)
Q Consensus 79 -----~~-~s~~~~F~T~ 90 (407)
+. .|....++|.
T Consensus 185 n~~G~g~~ss~~v~~~T~ 202 (205)
T 1cfb_A 185 NDRGESNVAAEEVVGYSG 202 (205)
T ss_dssp ETTEECSSCCCCEEEESS
T ss_pred cCCCcCCCCCCcEEEecC
Confidence 22 2455566664
|
| >3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A | Back alignment and structure |
|---|
Probab=92.92 E-value=0.14 Score=45.94 Aligned_cols=72 Identities=18% Similarity=0.285 Sum_probs=44.3
Q ss_pred CCCCcEEEEEEcCC-----C-CCCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCcC--
Q 040421 8 HEGKGVIVSWVTPD-----E-PGSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGVG-- 79 (407)
Q Consensus 8 ~~~~~~~v~W~t~~-----~-~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~~-- 79 (407)
...+++.|.|.-.. . ...-.|.|....+. ..... .. .-....+|++|+|+|.|.++|..-
T Consensus 208 ~~~~sv~l~W~~~~~~~~~g~i~~Y~v~~~~~~~~-~~~~~-----~~------~~~~~~~~~~L~p~t~Y~~~V~A~n~ 275 (290)
T 3l5i_A 208 VGKNEAVLEWDQLPVDVQNGFIRNYTIFYRTIIGN-ETAVN-----VD------SSHTEYTLSSLTSDTLYMVRMAAYTD 275 (290)
T ss_dssp ECSSCEEEEECCCCHHHHSSCCCEEEEEEEETTSC-CEEEE-----EE------TTCSEEEECSCCTTCEEEEEEEEEET
T ss_pred ccCCEEEEEEcCCChhccCCEEEEEEEEEEeCCCC-eEEEE-----eC------CCceEEEeCCCCCCCEEEEEEEEEeC
Confidence 34578999998321 1 22345777765432 11111 11 112356899999999999999542
Q ss_pred ---CceeeEEEEcCC
Q 040421 80 ---NATRQFSFTTPP 91 (407)
Q Consensus 80 ---~~s~~~~F~T~p 91 (407)
..|....|+|++
T Consensus 276 ~Gg~~s~~~~~~T~~ 290 (290)
T 3l5i_A 276 EGGKDGPEFTFTTPK 290 (290)
T ss_dssp TEEEECCCEEEECCC
T ss_pred CCCCCCCceEeecCC
Confidence 367788999864
|
| >2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A | Back alignment and structure |
|---|
Probab=92.89 E-value=0.31 Score=41.36 Aligned_cols=62 Identities=18% Similarity=0.233 Sum_probs=37.1
Q ss_pred cCCCCCcEEEEEEcCCCC----CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 6 GDHEGKGVIVSWVTPDEP----GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 6 g~~~~~~~~v~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
.....++++|.|..+... ..-.|+|..... .+.... .. ......++|++|+|+|.|.++|..
T Consensus 119 ~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~-~~~~~~-~~---------~~~~~~~~i~~L~p~t~Y~~~V~A 184 (209)
T 2vkw_A 119 MGEDGNSIKVNLIKQDDGGSPIRHYLVRYRALSS-EWKPEI-RL---------PSGSDHVMLKSLDWNAEYEVYVVA 184 (209)
T ss_dssp ECTTSSCEEEEEECCCCTTSCCCEEEEEEEETTS-CCCCCE-EE---------CTTCCEEEECSCCTTCEEEEEEEE
T ss_pred ccccCCeEEEEEECcccCCCCCceEEEEEECCCC-CCceee-ec---------CCCccEEEecCCCCCCEEEEEEEE
Confidence 344568999999986322 234677776222 221111 10 011234679999999999999964
|
| >2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A | Back alignment and structure |
|---|
Probab=92.82 E-value=0.26 Score=41.84 Aligned_cols=62 Identities=16% Similarity=0.147 Sum_probs=38.5
Q ss_pred CCCCCcEEEEEEcCCC--CCCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 7 DHEGKGVIVSWVTPDE--PGSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 7 ~~~~~~~~v~W~t~~~--~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
....+++.|.|.-+.. ...-.|+|.......... .. .. ..-...++|+||+|+|.|.++|..
T Consensus 124 ~~~~~sv~l~W~~p~~~~i~~Y~v~~~~~~~~~~~~-~~---~~------~~~~~~~~i~~L~p~t~Y~~~V~A 187 (203)
T 2gee_A 124 NIGPDTMRVTWAPPPSIDLTNFLVRYSPVKNEEDVA-EL---SI------SPSDNAVVLTNLLPGTEYVVSVSS 187 (203)
T ss_dssp EEETTEEEEEEECCSSCCCSEEEEEEEETTCGGGCE-EE---EE------CTTCCEEEECSCCTTCEEEEEEEE
T ss_pred EcCCCEEEEEEcCCCCCCccEEEEEEEECCCCCccE-EE---Ec------CCCcCEEEECCCCCCCEEEEEEEE
Confidence 3346899999998742 234567777744321111 00 00 112345788999999999999965
|
| >3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A | Back alignment and structure |
|---|
Probab=92.63 E-value=0.3 Score=43.89 Aligned_cols=87 Identities=18% Similarity=0.085 Sum_probs=49.4
Q ss_pred CCCCCcEEEEEEcCCC-CCCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCcC---Cce
Q 040421 7 DHEGKGVIVSWVTPDE-PGSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGVG---NAT 82 (407)
Q Consensus 7 ~~~~~~~~v~W~t~~~-~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~~---~~s 82 (407)
....++++|.|..... .....|+|........... ... .....+.|++|+|++.|.++|..- +.+
T Consensus 123 ~~~~~sv~l~W~~p~~~~~~Y~v~~~~~~~~~~~~~-----~~~------~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~s 191 (290)
T 3r8q_A 123 DATETTITISWRTKTETITGFQVDAVPANGQTPIQR-----TIK------PDVRSYTITGLQPGTDYKIYLYTLNDNARS 191 (290)
T ss_dssp EECSSCEEEEEECCSCCCCEEEEEEEESSSCCCEEE-----EEC------TTCSEEEECSCCTTCEEEEEEEEEETTEEC
T ss_pred EcCCCeEEEEEeCCCCcccEEEEEEEECCCCcceEE-----ecC------CCccEEEECCCCCCCEEEEEEEEEeCCccc
Confidence 3456789999998753 2345677766553222111 000 112346789999999999999642 222
Q ss_pred --eeEEEEcCCCCCCCCCcEEEEEec
Q 040421 83 --RQFSFTTPPGVGPDVPYTFGLIGD 106 (407)
Q Consensus 83 --~~~~F~T~p~~~~~~~~~f~~~gD 106 (407)
....+.|.|.+ ...+++...++
T Consensus 192 ~~~~~~~~t~p~~--P~~l~~~~~~~ 215 (290)
T 3r8q_A 192 SPVVIDASTAIDA--PSNLRFLATTP 215 (290)
T ss_dssp CCEEEEEECCCCC--CEEEEEEEEET
T ss_pred CCEEEEecCCCCC--CCccEEEeeCC
Confidence 34456666543 23455544433
|
| >1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=92.54 E-value=0.33 Score=41.05 Aligned_cols=79 Identities=13% Similarity=0.128 Sum_probs=44.2
Q ss_pred eeccCCCCCcEEEEEEcCCCCC----CCEEEEeecCC-CCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeC
Q 040421 3 ITQGDHEGKGVIVSWVTPDEPG----SNTVLYWAENS-TLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVG 77 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~ 77 (407)
|.+.. ..++++|.|.-..... .-.|+|....+ ..+....... . ... ....+ +|+|+|.|.+||.
T Consensus 12 ~~~~~-~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~~---~----~~~--~~~~~-~L~p~t~Y~~~V~ 80 (205)
T 1cfb_A 12 TGITC-QADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAYEKV---P----NTD--SSFVV-QMSPWANYTFRVI 80 (205)
T ss_dssp EEEEE-CSSEEEEEEECCCCTTSCCCEEEEEEEESSSTTCCEEEEEEE---E----TTC--SEEEE-ECCSSEEEEEEEE
T ss_pred cEEEe-cCCEEEEEEECcccCCCceEEEEEEEecCCCCCCceeeeecc---C----CCc--eEEEE-eCCCCCEEEEEEE
Confidence 33444 6789999999863222 24677766532 2232222111 1 111 12345 9999999999996
Q ss_pred c------CCce-eeEEEEcCCC
Q 040421 78 V------GNAT-RQFSFTTPPG 92 (407)
Q Consensus 78 ~------~~~s-~~~~F~T~p~ 92 (407)
. +..+ ....++|.+.
T Consensus 81 A~n~~G~~~~s~~~~~~~T~~~ 102 (205)
T 1cfb_A 81 AFNKIGASPPSAHSDSCTTQPD 102 (205)
T ss_dssp EEETTEECCCCCCCCCEEECCC
T ss_pred EEECCccCCCCCCceeEEcCCc
Confidence 4 2334 3456777653
|
| >3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=92.51 E-value=0.24 Score=41.25 Aligned_cols=59 Identities=20% Similarity=0.236 Sum_probs=37.8
Q ss_pred CCCCcEEEEEEcCCCC-----CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 8 HEGKGVIVSWVTPDEP-----GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 8 ~~~~~~~v~W~t~~~~-----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
...+++.|.|..+... ..-.|+|...+...+.... .. -....+|++|+|++.|.++|..
T Consensus 114 ~~~~~v~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~-~~-----------~~~~~~~~~L~p~t~Y~~~V~A 177 (197)
T 3lpw_A 114 VTRNSVSLSWEKPEHDGGSRILGYIVEMQTKGSDKWATCA-TV-----------KVTEATITGLIQGEEYSFRVSA 177 (197)
T ss_dssp ECSSCEEEEECCCSCCTTSCCCEEEEEEEETTCSCCEEEE-EE-----------SSSEEEECCCCTTCEEEEEEEE
T ss_pred ccCCeEEEEecCCCcCCCCcccEEEEEEEeCCCCceEEee-cc-----------cccEEEeCCcCCCCEEEEEEEE
Confidence 3467899999976432 2246777766543332211 10 1223678999999999999975
|
| >2edb_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=92.15 E-value=0.21 Score=38.34 Aligned_cols=56 Identities=20% Similarity=0.331 Sum_probs=34.5
Q ss_pred CcEEEEEEcCCCCC----CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 11 KGVIVSWVTPDEPG----SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 11 ~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
++++|.|.-+.... .-.|+|..... ..... . .. .-....+|++|+|+|.|.++|..
T Consensus 31 ~sv~l~W~~P~~~ng~i~gY~i~y~~~~~-~~~~~--~---~~------~~~~~~~l~~L~p~t~Y~~~V~A 90 (116)
T 2edb_A 31 NCIIMSWTPPLNPNIVVRGYIIGYGVGSP-YAETV--R---VD------SKQRYYSIERLESSSHYVISLKA 90 (116)
T ss_dssp SCEEEEECCCSCTTBCCCEEEEEEEESST-TSEEE--E---EE------TTCCEEEECSCCSSSBEEEEEEE
T ss_pred CEEEEEEcCCCCCCCceeEEEEEEEeCCC-CeEEE--E---eC------CCeeEEEeCCCCCCCEEEEEEEE
Confidence 79999999874331 24666765321 11111 0 00 11235688999999999999964
|
| >1q38_A Fibronectin; amyloid fibril, anastellin, extracellular matrix, dynamic fluctuations, conformational exchange, chaps, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=91.33 E-value=0.085 Score=37.25 Aligned_cols=66 Identities=18% Similarity=0.163 Sum_probs=40.6
Q ss_pred EEEEcC--CCCCCCEEEEeecCCCC-ceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc---C--CceeeEE
Q 040421 15 VSWVTP--DEPGSNTVLYWAENSTL-KQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV---G--NATRQFS 86 (407)
Q Consensus 15 v~W~t~--~~~~~~~v~y~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~---~--~~s~~~~ 86 (407)
|.|..+ .....-.+.|.+++... ++.+. -++..+.-+|.||+||++|.-++.+ . .....+.
T Consensus 2 IqWnap~~shi~~YIL~w~pk~~~~~wKev~-----------IPgh~nSYtIsGLkPGvtYegQLisV~r~g~~Evtrfd 70 (89)
T 1q38_A 2 RGSNAPQPSHISKYILRWRPKNSVGRWKEAT-----------IPGHLNSYTIKGLKPGVVYEGQLISIQQYGHQEVTRFD 70 (89)
T ss_dssp CCCCCSSCSSCSEEEEEEEETTTTCCCEEEE-----------ECSSSSCCCCCCCCTTCCEEEEEEEECTTSCCCEEEEE
T ss_pred ccccCCCcccceeeEEEEEecCCCCccEEEE-----------cCCccceEEEeccCCCcEEEEEEEeeeecccCCceEEE
Confidence 467743 23345678888877643 33222 1233445579999999999877644 2 2346677
Q ss_pred EEcCC
Q 040421 87 FTTPP 91 (407)
Q Consensus 87 F~T~p 91 (407)
|+|..
T Consensus 71 fTT~~ 75 (89)
T 1q38_A 71 FTTTS 75 (89)
T ss_dssp ECSSS
T ss_pred EEecc
Confidence 87753
|
| >2b5i_B Interleukin-2 receptor beta chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3qaz_B* 2erj_B* | Back alignment and structure |
|---|
Probab=91.17 E-value=0.35 Score=41.80 Aligned_cols=74 Identities=20% Similarity=0.242 Sum_probs=46.2
Q ss_pred CCcEEEEEEcCCCC------CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc-----
Q 040421 10 GKGVIVSWVTPDEP------GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV----- 78 (407)
Q Consensus 10 ~~~~~v~W~t~~~~------~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~----- 78 (407)
.+++.|+|..+... -...|+|...+.. +..+... .. ......+.|.+|.|||.|..||..
T Consensus 119 ~~~l~lsW~~p~~~~~~~~~l~Yevry~~~~~~-w~~~~~~--~~------~~~~~~~~l~~L~p~t~Y~vqVRa~~~~~ 189 (214)
T 2b5i_B 119 THRCNISWEISQASHYFERHLEFEARTLSPGHT-WEEAPLL--TL------KQKQEWICLETLTPDTQYEFQVRVKPLQG 189 (214)
T ss_dssp SSCEEEEEECCSCCGGGTTCEEEEEEEECTTSC-STTSCCE--EE------CSCCCEEEECSCCTTCEEEEEEEEEESCC
T ss_pred CCeEEEEECCCCccccCCCceEEEEEEecCCCC-hheeeee--ee------cccceEEEeccCCCCCEEEEEEEEeeCCC
Confidence 35899999987432 1356778776431 1111000 00 012346778999999999999953
Q ss_pred -----CCceeeEEEEcCCC
Q 040421 79 -----GNATRQFSFTTPPG 92 (407)
Q Consensus 79 -----~~~s~~~~F~T~p~ 92 (407)
+.||+...|+|.+.
T Consensus 190 ~~G~WS~WS~~~~~~T~~~ 208 (214)
T 2b5i_B 190 EFTTWSPWSQPLAFRTKPA 208 (214)
T ss_dssp SSCCCCCCCCCEEEECCC-
T ss_pred CCCCccCCCCCEEEEcCCC
Confidence 15788889999875
|
| >2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
Probab=91.08 E-value=0.71 Score=42.02 Aligned_cols=73 Identities=10% Similarity=0.009 Sum_probs=47.4
Q ss_pred CCcEEEEEEcCCCCC----CCEEEEe-ecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc------
Q 040421 10 GKGVIVSWVTPDEPG----SNTVLYW-AENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV------ 78 (407)
Q Consensus 10 ~~~~~v~W~t~~~~~----~~~v~y~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~------ 78 (407)
.+++.|+|..+...+ ...|+|. ..++..+..+... ......+.|.+|+|+|.|..||..
T Consensus 222 ~~~l~l~W~~p~~~~~~~l~Y~v~y~~~~~~~~w~~~~~~----------~~~~~~~~l~~L~p~t~Y~~rVra~~~~g~ 291 (313)
T 2d9q_B 222 AGCLQLSWEPWQPGLHINQKCELRHKPQRGEASWALVGPL----------PLEALQYELCGLLPATAYTLQIRCIRWPLP 291 (313)
T ss_dssp CSCEEEEEECCGGGTTSCEEEEEEEEESSSCCCCEEEEEE----------CSCEEEEEECSCCSCCCEEEEEEEEECSSC
T ss_pred CCeEEEEECCCCCCCceeEEEEEEEccCCCCCCcEEcccc----------cCcceEEEEeCCCCCCeEEEEEEeeECCCC
Confidence 578999999864211 3567787 4444344333211 112456789999999999999953
Q ss_pred C---CceeeEEEEcCCC
Q 040421 79 G---NATRQFSFTTPPG 92 (407)
Q Consensus 79 ~---~~s~~~~F~T~p~ 92 (407)
+ .||....|+|+..
T Consensus 292 G~wS~wS~~~~~~T~~~ 308 (313)
T 2d9q_B 292 GHWSDWSPSLELRTTER 308 (313)
T ss_dssp CCCCCCCCCEEECCCC-
T ss_pred CccCCCCCccceeCCcc
Confidence 2 3677788888653
|
| >3up1_A Interleukin-7 receptor subunit alpha; cytokine receptor, fibronectin type 3 fold, membrane and SOL glycosylation, immune system; HET: NAG FUC NGA; 2.15A {Homo sapiens} PDB: 3di3_B* 3di2_B* | Back alignment and structure |
|---|
Probab=90.81 E-value=0.69 Score=40.28 Aligned_cols=72 Identities=18% Similarity=0.177 Sum_probs=46.0
Q ss_pred CCcEEEEEEcCCCCC------CCEEEEeecC-CCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc----
Q 040421 10 GKGVIVSWVTPDEPG------SNTVLYWAEN-STLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV---- 78 (407)
Q Consensus 10 ~~~~~v~W~t~~~~~------~~~v~y~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~---- 78 (407)
+.++.|.|..+..+. .-.|+|.... ...+..+.. ......+.+.+|+|+|.|..||..
T Consensus 127 ~~~l~LsW~~P~~~~~~~~~L~YEVrYr~~~~~~~W~~v~~-----------~~t~~~i~l~~L~Pgt~Y~vqVR~r~~~ 195 (223)
T 3up1_A 127 ANDFVVTFNTSHLQKKYVKVLMHDVAYRQEKDENKWTHVNL-----------SSTKLTLLQRKLQPAAMYEIKVRSIPDH 195 (223)
T ss_dssp TTEEEEEEECGGGGCSSSCCEEEEEEEEESSCSSCCEEEEE-----------SSSEEEEEGGGSCTTCEEEEEEEEEECS
T ss_pred CCCEEEEECCCCCCCCcceeEEEEEEEEeCCCCCceEEEEe-----------cCceeEEeccccCCCcEEEEEEEEeeCC
Confidence 357889999874221 3467787764 223332211 011234567899999999999952
Q ss_pred ---C---CceeeEEEEcCCC
Q 040421 79 ---G---NATRQFSFTTPPG 92 (407)
Q Consensus 79 ---~---~~s~~~~F~T~p~ 92 (407)
+ .||....|+|++.
T Consensus 196 ~~~G~WSeWS~~~~~~T~~~ 215 (223)
T 3up1_A 196 YFKGFWSEWSPSYYFRTPEI 215 (223)
T ss_dssp SCCBCCCCCCCCEEEECCCC
T ss_pred CCCCCCCCCCCCeEEECCCC
Confidence 1 4678889999764
|
| >2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=90.75 E-value=0.38 Score=40.57 Aligned_cols=65 Identities=20% Similarity=0.176 Sum_probs=38.8
Q ss_pred eccCCCCCcEEEEEEcCCCC-CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 4 TQGDHEGKGVIVSWVTPDEP-GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 4 ~~g~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
.......+++.|.|.-+... ..-.|+|.......... ... .. .-...+.|+||+|+|.|.++|..
T Consensus 119 ~~~~~~~~sv~l~W~~p~~~i~~Y~v~~~~~~~~~~~~-~~~---v~------~~~~~~~i~~L~p~t~Y~~~V~A 184 (201)
T 2ha1_A 119 SVTEITASSFVVSWVSASDTVSGFRVEYELSEEGDEPQ-YLD---LP------STATSVNIPDLLPGRKYIVNVYQ 184 (201)
T ss_dssp SCCCCCSCCEEEECCCSCTTEEEEEEEEEETTTCCCCE-EEE---EE------TTCCEEEECSCCTTCEEEEEEEE
T ss_pred EEEecCCCeEEEEEeCCCCCccEEEEEEEECCCCCcee-EEE---cC------CceeEEEeCCCCCCCEEEEEEEE
Confidence 34444668999999876432 13456676543222111 101 11 11345789999999999999965
|
| >1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A | Back alignment and structure |
|---|
Probab=90.72 E-value=0.41 Score=44.48 Aligned_cols=66 Identities=14% Similarity=0.141 Sum_probs=39.3
Q ss_pred eccCCCCC-cEEEEEEcCCC--CCCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 4 TQGDHEGK-GVIVSWVTPDE--PGSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 4 ~~g~~~~~-~~~v~W~t~~~--~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
.......+ +++|.|..... ...-.|+|.............. . ......++|++|+|+|.|.|+|..
T Consensus 9 ~~~~~~~~~sv~l~W~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~---~------~~~~~~~~i~~L~p~t~Y~~~V~a 77 (368)
T 1fnf_A 9 HLEANPDTGVLTVSWERSTTPDITGYRITTTPTNGQQGNSLEEV---V------HADQSSCTFDNLSPGLEYNVSVYT 77 (368)
T ss_dssp EEEECSSSSCEEEEEECCSCSSCCEEEEEEEETTTCSSCCEEEE---E------CTTCCEEECCCCCTTSCEEEEEEE
T ss_pred EEEecCCCcEEEEEEeCCCCCCceEEEEEEEECCCCCCceeEEE---e------cCCcCEEEECCCCCCCEEEEEEEE
Confidence 33333344 69999998642 2345777776554222111111 0 011245789999999999999965
|
| >1oww_A FN, fibronectin first type III module, CIG; fibronectin type III module, structural protein; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=90.56 E-value=1.6 Score=31.91 Aligned_cols=70 Identities=19% Similarity=0.259 Sum_probs=46.3
Q ss_pred CCCcEEEEEEcCCCC--CCCEEEEeecCCC-CceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCcC---Cce
Q 040421 9 EGKGVIVSWVTPDEP--GSNTVLYWAENST-LKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGVG---NAT 82 (407)
Q Consensus 9 ~~~~~~v~W~t~~~~--~~~~v~y~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~~---~~s 82 (407)
.+++-.|.|..+..+ ....+.|+..... .+..+. -+.....-+|+||+||..|.-+|-+- +++
T Consensus 19 ~pdsh~iqW~~~s~s~I~eyiL~~R~k~~~g~Wke~~-----------Ip~h~nSYtI~GL~P~~~YE~qv~S~~ryG~~ 87 (98)
T 1oww_A 19 QPNSHPIQWNAPQPSHISKYILRWRPKNSVGRWKEAT-----------IPGHLNSYTIKGLKPGVVYEGQLISIQQYGHQ 87 (98)
T ss_dssp CTTCEEEEEECCSSSCEEEEEEEEEETTCSSCCEEEE-----------ECSSCCEEEECSCCSSEEEEEEEEEEESSSCE
T ss_pred CCCccceEEecCCCCCceEEEEEEEEcCCCCceeEEE-----------ecCccceEEEecCCCCcEEEEEEEEeeccCcc
Confidence 368899999998643 3456777776543 222221 12356667899999999999888652 343
Q ss_pred e--eEEEEc
Q 040421 83 R--QFSFTT 89 (407)
Q Consensus 83 ~--~~~F~T 89 (407)
+ .+.|.|
T Consensus 88 Evs~f~FtT 96 (98)
T 1oww_A 88 EVTRFDFTT 96 (98)
T ss_dssp EEEEEEEEE
T ss_pred cceEEEEEe
Confidence 2 667776
|
| >1axi_B HGHBP, growth hormone receptor; complex (hormone-receptor), complex (hormone-receptor) compl; 2.10A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1a22_B 1kf9_B 1hwg_B 1hwh_B 3hhr_B 2aew_A | Back alignment and structure |
|---|
Probab=90.09 E-value=0.18 Score=44.33 Aligned_cols=67 Identities=19% Similarity=0.249 Sum_probs=43.3
Q ss_pred cEEEEEEcCCCC--------CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc-----
Q 040421 12 GVIVSWVTPDEP--------GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV----- 78 (407)
Q Consensus 12 ~~~v~W~t~~~~--------~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~----- 78 (407)
++.|.|..+... -.-.|+|....+..+..... .....+.|.+|+|||.|..||..
T Consensus 152 ~l~lsW~~P~~~~~~~g~~~l~Yevry~~~~~~~w~~~~~------------~~~~~~~l~~L~p~t~Y~vqVRa~~~~g 219 (236)
T 1axi_B 152 DIQVRWEAPRNADIQKGWMVLEYELQYKEVNETKWKMMDP------------ILTTSVPVYSLKVDKEYEVRVRSKQRNS 219 (236)
T ss_dssp EEEEEEECCTTSCTTTTSCCEEEEEEEEETTCSSCEECCC------------BSSSEEEEEEEETTSCEEEEEEEEETTS
T ss_pred eEEEEECCCCCccccCCceeeEEEEEEEECCCCceEEEec------------cCCCEEEEeccCCCCEEEEEEEEEECCC
Confidence 499999987532 12467777765433322110 01245678899999999999964
Q ss_pred ---CCceeeEEEEcC
Q 040421 79 ---GNATRQFSFTTP 90 (407)
Q Consensus 79 ---~~~s~~~~F~T~ 90 (407)
+.||....|+|+
T Consensus 220 g~ws~WS~~~~~~~p 234 (236)
T 1axi_B 220 GNYGEFSEVLYVTLP 234 (236)
T ss_dssp SCCCCCCCCEEECCC
T ss_pred CCcCCCCCCEEEECC
Confidence 146777788775
|
| >1eer_B Epobp, erythropoietin receptor; signal transduction, hematopoietic cytokine, cytokine receptor class 1, complex (cytokine/receptor); 1.90A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1cn4_A 2jix_B 1eba_A* 1ern_A 1ebp_A | Back alignment and structure |
|---|
Probab=89.88 E-value=1.3 Score=38.29 Aligned_cols=71 Identities=21% Similarity=0.274 Sum_probs=44.7
Q ss_pred CCcEEEEEEcCCCCC-----CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc------
Q 040421 10 GKGVIVSWVTPDEPG-----SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV------ 78 (407)
Q Consensus 10 ~~~~~v~W~t~~~~~-----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~------ 78 (407)
.+++.|.|..+.... .-.|+|....+..+.... . .. . -...+.|.+|+|||.|..||..
T Consensus 136 ~~~l~v~W~~P~~~~~~~~l~Yev~y~~~~~~~w~~~~-~---~~----~--~~~~~~l~~L~p~t~Y~vqVRa~~~~~~ 205 (227)
T 1eer_B 136 SGHVVLRWLPPPETPMTSHIRYEVDVSAGQGAGSVQRV-E---IL----E--GRTECVLSNLRGRTRYTFAVRARMAEPS 205 (227)
T ss_dssp TTCEEEEEECCSSCSCGGGEEEEEEEECCSSSCCCCEE-E---EC----T--TCCEEEECCCCSSCEEEEEEEEEECTTT
T ss_pred CCeEEEEEcCCCCcccccceEEEEEEEcCCCCCcEEEE-E---Ee----c--CceEEEEcccCCCCeEEEEEEEeECCCC
Confidence 578999999875321 247778765543232111 0 00 0 1235678999999999999853
Q ss_pred -----CCceeeEEEEcC
Q 040421 79 -----GNATRQFSFTTP 90 (407)
Q Consensus 79 -----~~~s~~~~F~T~ 90 (407)
+.||....|+|+
T Consensus 206 ~~g~wS~WS~~~~~~t~ 222 (227)
T 1eer_B 206 FGGFWSEWSEPVSLLTP 222 (227)
T ss_dssp CCEECCCCCCCEEEEC-
T ss_pred CCCcCCCCCCCEEEECc
Confidence 246777888883
|
| >3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A | Back alignment and structure |
|---|
Probab=89.77 E-value=0.16 Score=44.30 Aligned_cols=80 Identities=21% Similarity=0.252 Sum_probs=44.2
Q ss_pred CCCCcEEEEEEcCCCCC----CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc-----
Q 040421 8 HEGKGVIVSWVTPDEPG----SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV----- 78 (407)
Q Consensus 8 ~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~----- 78 (407)
...++++|.|.-+.... .-.|+|....+..... +....... ........+|++|+|+|.|.++|..
T Consensus 110 ~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~--~~~~~~~~---~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G 184 (234)
T 3f7q_A 110 VSSTVTQLSWAEPAETNGEITAYEVCYGLVNDDNRPI--GPMKKVLV---DNPKNRMLLIENLRESQPYRYTVKARNGAG 184 (234)
T ss_dssp CSSSCEEEECCCCSCCSSCCCEEEEEEEEBCTTSCBS--SCCEECCC---SCTTCCEEEEECCCTTCCEEEEEEEEETTE
T ss_pred ecCCEEEEEEcCCCCCCCceeEEEEEEEECCCCCCcc--CcceEEEe---cCCcceEEEeCCCCCCCeEEEEEEEECCCc
Confidence 35678999998764321 2366676654321100 00000000 1112235789999999999999964
Q ss_pred -CCcee-eEEEEcCCC
Q 040421 79 -GNATR-QFSFTTPPG 92 (407)
Q Consensus 79 -~~~s~-~~~F~T~p~ 92 (407)
+..|. ...|+|.+.
T Consensus 185 ~g~~S~~~~~~~T~~~ 200 (234)
T 3f7q_A 185 WGPEREAIINLATQPK 200 (234)
T ss_dssp ECCCEEEEECGGGSCC
T ss_pred cCCCcCceeEeecCCC
Confidence 23444 467777653
|
| >2ekj_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=89.38 E-value=0.043 Score=41.55 Aligned_cols=65 Identities=20% Similarity=0.243 Sum_probs=39.8
Q ss_pred eeccCCCCCcEEEEEEcCCCC-CCCEEEEeecCCCC-ceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 3 ITQGDHEGKGVIVSWVTPDEP-GSNTVLYWAENSTL-KQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
|.+.+.+.+++.|.|.-.... ....|+|....... ..... ...-...++|+||+|+|.|.++|..
T Consensus 14 l~v~~~t~~si~lsW~~p~g~i~~Y~v~y~~~~~~~~~~~~~-----------v~~~~~~~~l~~L~p~t~Y~~~V~A 80 (105)
T 2ekj_A 14 LALASETPDSLQVSWTPPLGRVLHYWLTYAPASGLGPEKSVS-----------VPGARSHVTLPDLQAATKYRVLVSA 80 (105)
T ss_dssp EEEEEEETTEEEEEEECCSSCCSBBCBBCCCTTSCSCCCCBC-----------CBTTSSEEEECSCCSSCCCBCBBCB
T ss_pred eEEEeCCCCEEEEEEeCCCCcceEEEEEEEECCCCCccEEEE-----------eCCCcCEEEeCCCCCCCEEEEEEEE
Confidence 444455678999999987432 23466676644321 10000 0111245789999999999999965
|
| >3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B | Back alignment and structure |
|---|
Probab=89.23 E-value=1 Score=41.89 Aligned_cols=65 Identities=15% Similarity=0.234 Sum_probs=40.9
Q ss_pred eeccCCCCCcEEEEEEcCCCC-CCCEEEEeecCC-CCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 3 ITQGDHEGKGVIVSWVTPDEP-GSNTVLYWAENS-TLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
|.......++++|.|..+... ..-.|+|..... ....... .. .-....+|+||+||+.|.++|..
T Consensus 284 l~~~~~~~~sv~l~W~~p~~~~~~Y~v~~~~~~~~~~~~~~~-----~~------~~~~~~~i~~L~p~t~Y~~~V~A 350 (375)
T 3t1w_A 284 IDFSDITANSFTVHWIAPRATITGYRIRHHPEHFSGRPREDR-----VP------HSRNSITLTNLTPGTEYVVSIVA 350 (375)
T ss_dssp EEEESCCSSCEEEEEECCSSCCSEEEEEEEETTCCSSCEEEE-----EE------TTCCEEEECSCCTTCEEEEEEEE
T ss_pred cEeeeccCCEEEEEECCCCcceeeEEEEEEECCCCCcceeEE-----cC------CCccEEEECCCCCCCEEEEEEEE
Confidence 444455678999999986432 345677777654 2221111 10 11235688999999999999965
|
| >1wj3_A KIAA1496 protein; beta sandwich, PANG, structural genomics, riken structural genomics/proteomics initiative, RSGI, neuropeptide; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=89.07 E-value=1.5 Score=33.55 Aligned_cols=69 Identities=17% Similarity=0.290 Sum_probs=42.3
Q ss_pred CCCcEEEEEEcCCC--CC----CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc----
Q 040421 9 EGKGVIVSWVTPDE--PG----SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV---- 78 (407)
Q Consensus 9 ~~~~~~v~W~t~~~--~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~---- 78 (407)
..+++.|.|.-... .. .-.|.|............ .+ . ..+.+. |+|+|.|.++|..
T Consensus 30 ~~~si~l~W~~p~~~~~ng~i~gY~v~y~~~~~~~~~~~~--------~~---~--~~~~~~-L~~~t~Y~~~V~A~n~~ 95 (117)
T 1wj3_A 30 TDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQNNVQVLN--------TN---K--TSAELV-LPIKEDYIIEVKATTDG 95 (117)
T ss_dssp ETTEEEEECCCCCCCSSSCCEEEEEEEEEESSCSSCEEEE--------ES---S--SEEEEE-CCCSSCEEEEEEEEESS
T ss_pred eCCEEEEEEcCCCccccCCceeEEEEEEEECCCCCCeEEe--------CC---C--cEEEEE-CCCCCEEEEEEEEECCC
Confidence 35789999987631 21 235666665443221110 01 1 245666 9999999999953
Q ss_pred --CCceeeEEEEcCC
Q 040421 79 --GNATRQFSFTTPP 91 (407)
Q Consensus 79 --~~~s~~~~F~T~p 91 (407)
+..|....|+|..
T Consensus 96 G~Gp~S~~v~~~T~~ 110 (117)
T 1wj3_A 96 GDGTSSEQIRIPRIT 110 (117)
T ss_dssp CCCCBCCCEEECCCC
T ss_pred ccCCCCCCEEEEcCC
Confidence 3567778888865
|
| >3csg_A MBP, maltose-binding protein monobody YS1 fusion, MMBP; engineered binding protein, antibody mimic, synthetic protein interface; 1.80A {Escherichia coli} PDB: 2obg_A 3csb_A* 3a3c_A* 3d4g_A* 3d4c_A* 3ef7_A* | Back alignment and structure |
|---|
Probab=88.92 E-value=0.37 Score=46.80 Aligned_cols=63 Identities=14% Similarity=0.114 Sum_probs=39.9
Q ss_pred ccCCCCCcEEEEEEcCCC--CCCCEEEEeecCCCC-ceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 5 QGDHEGKGVIVSWVTPDE--PGSNTVLYWAENSTL-KQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 5 ~g~~~~~~~~v~W~t~~~--~~~~~v~y~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
....+.+|++|+|..+.. ...-.|+|.+..... ..... .. .-...++|+||+|||.|..+|..
T Consensus 378 ~~~~~~~s~~l~W~~p~~~~~~~y~v~y~~~~~~~~~~~~~-----~~------~~~~~~~i~~L~p~t~Y~~~v~a 443 (461)
T 3csg_A 378 VVAATPTSLLISWDASYSSSVSYYRITYGETGGNSPVQEFT-----VP------GSKSTATISGLSPGVDYTITVYA 443 (461)
T ss_dssp EEEECSSCEEEECCCTTGGGCSEEEEEEEETTCCSCCEEEE-----EE------TTCCEEEECSCCTTCEEEEEEEE
T ss_pred EeccCCCeEEEEecCCCCCcceEEEEEEEECCCCccceEEE-----ec------CCCceEEecCCCCCCEEEEEEEE
Confidence 334467899999988621 124578887775321 11111 00 11256899999999999999865
|
| >2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A | Back alignment and structure |
|---|
Probab=88.76 E-value=0.46 Score=40.34 Aligned_cols=69 Identities=17% Similarity=0.284 Sum_probs=37.8
Q ss_pred CCCcEEEEEEcCCCCC----CCEEEEeecCC-CCceEEEEEEEEEEec--CCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 9 EGKGVIVSWVTPDEPG----SNTVLYWAENS-TLKQQAHGIVLTYNYF--NYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 9 ~~~~~~v~W~t~~~~~----~~~v~y~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
..++++|.|.-..... .-.|+|...+. ..+....... .+... +....-...++|++|+|+|.|.|||..
T Consensus 14 ~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~~-~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A 89 (214)
T 2ibg_A 14 SDESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNI-PYGKPKWNSELGKSFTASVTDLKPQHTYRFRILA 89 (214)
T ss_dssp ETTEEEEEEEEECCSSCCEEEEEEEEEESSSSCCCEECSCCE-ECCSSSCSSSSEEEEEEEECSCCTTCEEEEEEEE
T ss_pred cCCEEEEEEECCCCCCCCceEEEEEEEECCCCCcCccccccc-CccccccccccCcceeEEecCCcCCCEEEEEEEE
Confidence 4679999999765322 23566666432 1222111100 00000 001123456789999999999999964
|
| >1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A | Back alignment and structure |
|---|
Probab=88.37 E-value=2.6 Score=38.86 Aligned_cols=92 Identities=13% Similarity=0.085 Sum_probs=50.4
Q ss_pred eeccCCCCCcEEEEEEcCCCCC-CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCcC--
Q 040421 3 ITQGDHEGKGVIVSWVTPDEPG-SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGVG-- 79 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~~-~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~~-- 79 (407)
|.......+++.|.|......- .-.|+|........... .. .. ......+|++|+|++.|.++|..-
T Consensus 192 l~~~~~~~~sv~l~W~~p~~~i~~Y~v~~~~~~~~~~~~~-~~---~~------~~~~~~~i~~L~p~t~Y~~~V~A~n~ 261 (368)
T 1fnf_A 192 IDFSDITANSFTVHWIAPRATITGYRIRHHPEHFSGRPRE-DR---VP------HSRNSITLTNLTPGTEYVVSIVALNG 261 (368)
T ss_dssp EEEESCCSSEEEEEEECCSSCCSEEEEEEECSCCSSCCEE-EE---EE------TTCCEEEEESCCTTCEEEEEEEEEET
T ss_pred cEEEEccCCEEEEEEeCCCCCcCEEEEEEecCCCCCCccE-EE---eC------CCcCEEEECCCCCCCEEEEEEEEEeC
Confidence 3444456789999999864322 35667766543211111 11 11 112346789999999999999652
Q ss_pred -Cce--eeEEEEcCCCCCCCCCcEEEEEec
Q 040421 80 -NAT--RQFSFTTPPGVGPDVPYTFGLIGD 106 (407)
Q Consensus 80 -~~s--~~~~F~T~p~~~~~~~~~f~~~gD 106 (407)
+.+ ....+.|+|.+ ...+++...++
T Consensus 262 ~g~~~~~~~~~~t~p~~--P~~l~~~~~~~ 289 (368)
T 1fnf_A 262 REESPLLIGQQSTVSDV--PRDLEVVAATP 289 (368)
T ss_dssp TEECCCEEEEEECCCCS--CEEEEEEEEET
T ss_pred CccCCcccccccCCCCC--CCeeEEEecCC
Confidence 111 22345666543 13455544443
|
| >1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A | Back alignment and structure |
|---|
Probab=88.19 E-value=1.4 Score=40.41 Aligned_cols=58 Identities=21% Similarity=0.181 Sum_probs=37.5
Q ss_pred CCcEEEEEEcCCCC------CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 10 GKGVIVSWVTPDEP------GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 10 ~~~~~v~W~t~~~~------~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
++++.|+|..+... -.-.|+|.......+..+.. . .....++|.+|+|++.|..||..
T Consensus 212 ~~sv~lsW~~p~~~~~~~~~~~Y~V~yr~~~~~~W~~~~~-------~----~~~~~~~l~~L~p~t~Y~~rVrA 275 (325)
T 1n26_A 212 PRWLSVTWQDPHSWNSSFYRLRFELRYRAERSKTFTTWMV-------K----DLQHHCVIHDAWSGLRHVVQLRA 275 (325)
T ss_dssp TTCEEEEEECCTTCCCSSSCEEEEEEEEETTCSCCEEEEC-------G----GGCSEEEESSCCTTCCEEEEEEE
T ss_pred CCEEEEEECCCCccCCCcEeEEEEEEEEeCCCCCCEEEcc-------c----CCceEEEEeCCCCCCeEEEEEEE
Confidence 46899999987531 12367787765444432211 0 11235678999999999999954
|
| >3lqm_A Interleukin-10 receptor subunit beta; IL-10R2, common chain, cytokine, IL-10, IL-22, IL- 28, IL-29, disulfide bond, glycoprotein, membrane; 2.14A {Homo sapiens} | Back alignment and structure |
|---|
Probab=87.01 E-value=1.1 Score=37.94 Aligned_cols=70 Identities=19% Similarity=0.224 Sum_probs=43.7
Q ss_pred CCcEEEEEEcCCCC--------------CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEE
Q 040421 10 GKGVIVSWVTPDEP--------------GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYE 75 (407)
Q Consensus 10 ~~~~~v~W~t~~~~--------------~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~ 75 (407)
.+++.|.|..+..+ -.-.|.|+..++....... . . ...++|.+|+|+|.|..+
T Consensus 105 ~~si~v~w~~P~~~~~~~~~~~~~~~~~l~Y~v~y~~~~~~~~~~~~------~----~---~~~~~l~~L~p~t~Ycv~ 171 (201)
T 3lqm_A 105 ADCLHMRFLAPKIENEYETWTMKNVYNSWTYNVQYWKQGTDEKFQIT------P----Q---YDFEVLRNLEPWTTYCVQ 171 (201)
T ss_dssp TTEEEEEEECCEEECSSCEEEHHHHCTTCEEEEEEEETTCCCCEEEC------C----S---SSEEEECSCCTTCEEEEE
T ss_pred CCEEEEEEcCCCccCCCcccCHHHhCCceEEEEEEEECCCCcEEEEE------e----c---CceEEEecCCCCCcEEEE
Confidence 46899999886311 1345666665432211110 0 0 124789999999999999
Q ss_pred eCc--------CCceeeEEEEcCCC
Q 040421 76 VGV--------GNATRQFSFTTPPG 92 (407)
Q Consensus 76 v~~--------~~~s~~~~F~T~p~ 92 (407)
|.. +.+|+...|+|.+.
T Consensus 172 V~a~~~~~~~~g~~S~~~c~~T~~~ 196 (201)
T 3lqm_A 172 VRGFLPDRNKAGEWSEPVCEQTTHD 196 (201)
T ss_dssp EEEEETTTTEECCCCCCEEEECCCG
T ss_pred EEEEeccCCCCCCcCCCEeEEeCCC
Confidence 853 24677788888653
|
| >1x5i_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 | Back alignment and structure |
|---|
Probab=86.66 E-value=0.94 Score=35.14 Aligned_cols=56 Identities=20% Similarity=0.328 Sum_probs=33.8
Q ss_pred CcEEEEEEcCCCCC----CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 11 KGVIVSWVTPDEPG----SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 11 ~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
++++|.|.-+.... ...|+|.... ...... .. ..-....+|++|+|+|.|.++|..
T Consensus 41 ~sv~l~W~~P~~~~g~i~~Y~v~y~~~~-~~~~~~-----~~------~~~~~~~~i~~L~p~t~Y~~~V~A 100 (126)
T 1x5i_A 41 TSIVVSWTPPENQNIVVRGYAIGYGIGS-PHAQTI-----KV------DYKQRYYTIENLDPSSHYVITLKA 100 (126)
T ss_dssp TEEEEEEECCSCTTBCCCEEEEEECSSC-GGGEEE-----EC------CTTCCEEEECSCCSSCEECCEEEE
T ss_pred CEEEEEEcCCCCCCCCEeEEEEEEEcCC-CCceEE-----Ee------CCCeeEEEEeCCCCCCEEEEEEEE
Confidence 78999999875322 2356666321 111110 00 112345688999999999999964
|
| >1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=86.60 E-value=2.2 Score=43.69 Aligned_cols=35 Identities=20% Similarity=0.307 Sum_probs=25.2
Q ss_pred EEEEEEcCCCCCCEEEEEeCc------CCceee---EEEEcCCC
Q 040421 58 IHHCTIEDLEFDTKYYYEVGV------GNATRQ---FSFTTPPG 92 (407)
Q Consensus 58 ~~~~~l~gL~p~t~Y~Y~v~~------~~~s~~---~~F~T~p~ 92 (407)
...++|++|+|+|.|.+||.. +..|.. ..++|.+.
T Consensus 333 ~~~~~l~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~v~~~T~~~ 376 (680)
T 1zlg_A 333 QNSVILEKLQPDCDYVVELQAITYWGQTRLKSAKVSLHFTSTHA 376 (680)
T ss_pred eeEEEeCCCCCCCEEEEEEEEEECCCcCCCCCCceeEEEECCCC
Confidence 356789999999999999954 223333 67777654
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=85.66 E-value=1.6 Score=43.73 Aligned_cols=61 Identities=20% Similarity=0.214 Sum_probs=42.6
Q ss_pred cCCCCCcEEEEEEcCCC-CC----CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 6 GDHEGKGVIVSWVTPDE-PG----SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 6 g~~~~~~~~v~W~t~~~-~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
.+.+.++++++|..+.. .+ ...|++...++..|..+. .+ . .. ..+++||.||+.|.+||..
T Consensus 19 ~~~~~~sv~L~W~~P~~DGgs~I~~Y~vE~~~~~~~~W~~v~-~~---~----~t----~~~V~~L~~g~~Y~FRV~A 84 (573)
T 3uto_A 19 ENILDEAVILSWKPPALDGGSLVTNYTIEKREAMGGSWSPCA-KS---R----YT----YTTIEGLRAGKQYEFRIIA 84 (573)
T ss_dssp EEECSSCEEEEEECCSCCSSSCCCEEEEEEEESSSCCCEEEE-EE---S----SS----EEEECCCCTTCEEEEEEEE
T ss_pred EEeeCCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEec-cc---c----CC----EEEeCCCCCCCcEeEEEEE
Confidence 34467899999998742 22 257788888877776553 21 1 11 2578999999999999964
|
| >4doh_R Interleukin-20 receptor subunit alpha; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=84.67 E-value=4.3 Score=34.96 Aligned_cols=70 Identities=17% Similarity=0.078 Sum_probs=45.6
Q ss_pred CCcEEEEEEcCCCC-----------------CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEE
Q 040421 10 GKGVIVSWVTPDEP-----------------GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKY 72 (407)
Q Consensus 10 ~~~~~v~W~t~~~~-----------------~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y 72 (407)
.+++.|.|.-+..+ -.-.|.|+..++... .... . . .+.++|.+|+|+|.|
T Consensus 120 ~~~l~V~~~~P~~~~~~~~~~~~s~~~i~~~l~Y~V~y~~~~~~~~--~~~~---~------~--~~~~~l~~L~p~t~Y 186 (221)
T 4doh_R 120 EKSISVVLTAPEKWKRNPEDLPVSMQQIYSNLKYNVSVLNTKSNRT--WSQC---V------T--NHTLVLTWLEPNTLY 186 (221)
T ss_dssp SSCEEEEEECCBCCCSSTTSCCCBHHHHSTTCEEEEEEEETTTTEE--EEEE---E------C--SSEEEECSCCTTCEE
T ss_pred CCEEEEEEeCCCcccccCCCCceEHHHhcCceEEEEEEEECCCCcE--EEEe---e------c--CcEEEEecCCCCCcE
Confidence 46899999976422 124677777654321 1111 0 0 135689999999999
Q ss_pred EEEeCc--------CCceeeEEEEcCCC
Q 040421 73 YYEVGV--------GNATRQFSFTTPPG 92 (407)
Q Consensus 73 ~Y~v~~--------~~~s~~~~F~T~p~ 92 (407)
..+|.. +.+|+...|+|.+.
T Consensus 187 cv~V~a~~~~~~~~g~~S~~~c~~T~~d 214 (221)
T 4doh_R 187 CVHVESFVPGPPRRAQPSEKQCARTLKD 214 (221)
T ss_dssp EEEEEEECSSSCCCCCCCEEEEEECCCC
T ss_pred EEEEEEEEcCCCCCCCCCCCEeEecCCC
Confidence 999853 24688888999764
|
| >3s98_A Interferon alpha/beta receptor 1; human, type I interferons, receptor chain, ifnar1, fibronect III, type I interferon receptor chain; HET: NAG; 1.90A {Homo sapiens} | Back alignment and structure |
|---|
Probab=84.25 E-value=8.1 Score=34.92 Aligned_cols=67 Identities=16% Similarity=0.317 Sum_probs=41.0
Q ss_pred CcEEEEEEcCCCCC-----------CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc-
Q 040421 11 KGVIVSWVTPDEPG-----------SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV- 78 (407)
Q Consensus 11 ~~~~v~W~t~~~~~-----------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~- 78 (407)
+++.|.|. +.... .-.|.|+..++.......+ -...++|.+|+|+|.|..+|..
T Consensus 114 ~si~v~w~-P~~~~~~~~~~~g~~l~Y~v~y~~~~~~~~~~~~~-------------~~~~~~l~~L~p~t~Y~~~V~A~ 179 (306)
T 3s98_A 114 KAIVIHIS-PGTKDSVMWALDGLSFTYSLVIWKNSSGVEERIEN-------------IYSRHKIYKLSPETTYCLKVKAA 179 (306)
T ss_dssp SCEEEEEE-CC---CCCC-----CCEEEEEEEETTTCCCEEEEE-------------ECTEEEECSCCTTCEEEEEEEEE
T ss_pred CEEEEEEE-CCCCCCcceeccCCcEEEEEEEEECCCCCeEEEec-------------ccceEEEccCCCCCeEEEEEEEE
Confidence 58999999 43211 1256676665433222111 1135789999999999999853
Q ss_pred -------CCceeeEEEEcCC
Q 040421 79 -------GNATRQFSFTTPP 91 (407)
Q Consensus 79 -------~~~s~~~~F~T~p 91 (407)
+..|+...++|..
T Consensus 180 ~~~~~g~g~~S~~~~~~T~~ 199 (306)
T 3s98_A 180 LLTSWKIGVYSPVHCIKTTV 199 (306)
T ss_dssp EGGGTEECCCCCCEEEECCS
T ss_pred EccCCCCCCCCCcEeeEecC
Confidence 2456777777753
|
| >3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A | Back alignment and structure |
|---|
Probab=84.19 E-value=5.1 Score=35.42 Aligned_cols=61 Identities=13% Similarity=0.092 Sum_probs=36.3
Q ss_pred CcEEEEEEcCCC-CCCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 11 KGVIVSWVTPDE-PGSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 11 ~~~~v~W~t~~~-~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
+++.|.|.-... .....|+|............ ..... ........+++|+|+|.|.++|..
T Consensus 115 ~si~l~W~~p~~~i~~Y~v~~~~~~~~~~~~~~--~~~~~-----~~~~~~~~~~~L~p~t~Y~~~V~A 176 (290)
T 3l5i_A 115 NMLWVEWTTPRESVKKYILEWCVLSDKAPCITD--WQQED-----GTVHRTYLRGNLAESKCYLITVTP 176 (290)
T ss_dssp TEEEEEEECCSSCCCEEEEEEEEECSSSCCCCE--EEEEE-----TTCSEEECCSCCCTTCEEEEEEEE
T ss_pred CeEEEEEeCCCCCCCcEEEEEEECCCCCCCCcC--eEEcc-----CCCcceEEecCcCCccEEEEEEEE
Confidence 689999998754 23456777765543210000 00000 112344667999999999999964
|
| >2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A | Back alignment and structure |
|---|
Probab=84.14 E-value=5.8 Score=36.64 Aligned_cols=73 Identities=22% Similarity=0.227 Sum_probs=44.0
Q ss_pred CCCcEEEEEEcCCCC-CC----CEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc-----
Q 040421 9 EGKGVIVSWVTPDEP-GS----NTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV----- 78 (407)
Q Consensus 9 ~~~~~~v~W~t~~~~-~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~----- 78 (407)
..+++.|.|..+... +. ..|+|...+...+.... .........|.+|+|++.|.|+|..
T Consensus 208 ~~~~~~l~w~~p~~~~g~pi~~y~v~~~~~~~~~~~~~~-----------~~~~~~~~~i~~l~~~~~y~~~v~A~N~~G 276 (389)
T 2jll_A 208 SQTTAKVSFNKPDSHGGVPIHHYQVDVKEVASEIWKIVR-----------SHGVQTMVVLNNLEPNTTYEIRVAAVNGKG 276 (389)
T ss_dssp CSSCEEEEEECCSCCTTSCEEEEEEEEEETTCSCCEEEE-----------CSTTCSEEEECSCCTTCEEEEEEEEEESSC
T ss_pred cCCEEEEEEeCCCCCCCcceEEEEEEEEECCCcccEEee-----------ccCCcceEEECCccCCCEEEEEEEEEcCCc
Confidence 357899999864322 11 24666665543332111 0112245778999999999999954
Q ss_pred -CCceeeEEEEcCCC
Q 040421 79 -GNATRQFSFTTPPG 92 (407)
Q Consensus 79 -~~~s~~~~F~T~p~ 92 (407)
+..|....|+|.+.
T Consensus 277 ~~~~s~~~~~~t~~~ 291 (389)
T 2jll_A 277 QGDYSKIEIFQTLPV 291 (389)
T ss_dssp BCCCCCCEEEECCCC
T ss_pred cCCCCcceEEEecCC
Confidence 23456677888653
|
| >3v6o_A Leptin receptor; receptor-antibody complex, cytokine receptor, antibody FAB F immunoglobulin fold; HET: NAG; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=83.89 E-value=2 Score=36.43 Aligned_cols=59 Identities=12% Similarity=0.056 Sum_probs=32.7
Q ss_pred CCcEEEEEEcCCCCC---CCEEEEeecCC-CCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 10 GKGVIVSWVTPDEPG---SNTVLYWAENS-TLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 10 ~~~~~v~W~t~~~~~---~~~v~y~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
.+++.|.|..+..+. .-.|+|...++ ..+..+... ......+.|.+|+|||.|..||..
T Consensus 124 ~~~l~l~W~~P~~~~~~l~yev~y~~~~~~~~w~~~~~~----------~~~~~~~~l~~L~p~t~Y~vqVRa 186 (206)
T 3v6o_A 124 IGLLKISWEKPVFPENNLQFQIRYGLSGKEVQWKMYEVY----------DAKSKSVSLPVPDLCAVYAVQVRC 186 (206)
T ss_dssp TTEEEEEC--------CEEEEEEEEESSSSCCCEEEEEC----------C---CEEEECCSCTTSCEEEEEEE
T ss_pred CCeEEEEECCCCCCCCcEEEEEEEEECCCCCceEEEecc----------cCcceeEEeecCCCCCEEEEEEEE
Confidence 578999999874322 34677777652 223222110 111235788999999999999964
|
| >3tgx_A Interleukin-21 receptor; class I cytokine, class I cytokine receptor, sugarbridge, fibronectine domain, signaling, cytokine-cytokine receptor; HET: MAN FUL NAG BMA FUC; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=83.48 E-value=1.7 Score=37.49 Aligned_cols=76 Identities=13% Similarity=0.127 Sum_probs=46.9
Q ss_pred CCcEEEEEEcCCCC---------CCCEEEEeecCCCCceEE-EEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc-
Q 040421 10 GKGVIVSWVTPDEP---------GSNTVLYWAENSTLKQQA-HGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV- 78 (407)
Q Consensus 10 ~~~~~v~W~t~~~~---------~~~~v~y~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~- 78 (407)
...+.|.|..+... -.-.|+|....+ .+..+ ..... . .......+.+.+|.||+.|..||..
T Consensus 112 ~~~l~lsW~~P~~~p~~~~~~~~L~Yevryr~~~~-~W~~~~~~~~~--~----~~~~~~~~~~~~L~p~t~Y~vqVRa~ 184 (219)
T 3tgx_A 112 SGQYQISWRSDYEDPAFYMLKGKLQYELQYRNRGD-PWAVSPRRKLI--S----VDSRSVSLLPLEFRKDSSYELQVRAG 184 (219)
T ss_dssp SSSEEEEEECGGGSGGGGGGTTSEEEEEEEEETTS-CTTSCCEEEEE--C----SSCSEEEECTTSSCSSCEEEEEEEEE
T ss_pred CCCEEEEEeCCcCCccccccccCEEEEEEEecCCC-CceecccceeE--e----cCCCEEEEEeccCCCCCEEEEEEEEe
Confidence 36899999986431 135678877764 22211 11110 0 1123455668899999999999942
Q ss_pred --------C---CceeeEEEEcCCC
Q 040421 79 --------G---NATRQFSFTTPPG 92 (407)
Q Consensus 79 --------~---~~s~~~~F~T~p~ 92 (407)
| .||+...|.|++.
T Consensus 185 ~~~g~~~~G~WSeWS~~~~~~T~~~ 209 (219)
T 3tgx_A 185 PMPGSSYQGTWSEWSDPVIFQTQSE 209 (219)
T ss_dssp ECTTSSCCBCCCCCCCCEEEECCC-
T ss_pred eCCCCCCCCcCcCCCCCeEEECCch
Confidence 2 3688899999764
|
| >3se4_A Interferon alpha/beta receptor 1; type I interferon signaling complex, extracellular space, IM system receptor; HET: NAG; 3.50A {Homo sapiens} PDB: 3se3_A* | Back alignment and structure |
|---|
Probab=83.47 E-value=6 Score=37.44 Aligned_cols=68 Identities=15% Similarity=0.283 Sum_probs=42.3
Q ss_pred CCcEEEEEEcCCCCC-----------CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 10 GKGVIVSWVTPDEPG-----------SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 10 ~~~~~v~W~t~~~~~-----------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
.+++.|+|. +.... .-.|.|+..++.......+ -...++|.+|.|+|.|..+|..
T Consensus 117 ~~si~v~w~-P~~~~g~~~~~~~~~~~Y~v~y~~~~~~~~~~~~~-------------~~~~~~i~~L~p~t~Y~~~V~A 182 (414)
T 3se4_A 117 DKAIVIHIS-PGTKDSVMWALDGLSFTYSLVIWKNSSGVEERIEN-------------IYSRHKIYKLSPETTYCLKVKA 182 (414)
T ss_dssp SSCEEEEEE-CSSSSCTTTGGGGSSCEEEEEEEETTTCCEEEEEE-------------ECSEEEECCCCTTCEEEEEEEE
T ss_pred CCEEEEEEE-cCCCCCceeeeecCcEEEEEEEEECCCCceEEEec-------------CCcEEEEcCCCCCCeEEEEEEE
Confidence 358999999 64221 2467777766533221111 1234789999999999999864
Q ss_pred C--------CceeeEEEEcCC
Q 040421 79 G--------NATRQFSFTTPP 91 (407)
Q Consensus 79 ~--------~~s~~~~F~T~p 91 (407)
- ..|+...++|..
T Consensus 183 ~n~~~~g~g~~S~~~~~~t~~ 203 (414)
T 3se4_A 183 ALLTSWKIGVYSPVHCIKTTV 203 (414)
T ss_dssp ECTTTCCEEEECCCEEEECCS
T ss_pred EeccCCCCCccCccccccccc
Confidence 1 245556677753
|
| >1iar_B Protein (interleukin-4 receptor alpha chain); cytokine receptor,interleukin-4, cytokine/receptor complex; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_B* 3bpn_B* 3bpo_B* | Back alignment and structure |
|---|
Probab=82.65 E-value=3.2 Score=35.29 Aligned_cols=82 Identities=15% Similarity=0.159 Sum_probs=41.0
Q ss_pred eeccCCCCCcEEEEEEcCCCC-------CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEE
Q 040421 3 ITQGDHEGKGVIVSWVTPDEP-------GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYE 75 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~-------~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~ 75 (407)
|++....+..+.|.|..+... =.-.|+|....+.-. ...... . .......+.+.+|.||+.|..|
T Consensus 104 l~~~~~~~~~l~l~W~~p~~~~~~~~~~L~yev~y~~~~~~~~-~~~~~~---~----~~~~~~~~~~~~L~p~~~Y~vq 175 (207)
T 1iar_B 104 LTVHTNVSDTLLLTWSNPYPPDNYLYNHLTYAVNIWSENDPAD-FRIYNV---T----YLEPSLRIAASTLKSGISYRAR 175 (207)
T ss_dssp EEEC----CCEEEEEECSSCTTSTTGGGCEEEEEEEESSSCSC-EEEEEE---C----SSCCEEEECC-----CCCEEEE
T ss_pred eEEEEccCCCEEEEECCCCCccccccccEEEEEEEccCCCchh-heeeee---e----cCCcEEEEEHHHCCCCCEEEEE
Confidence 333322345799999987421 125788887654322 111110 0 1233455667799999999999
Q ss_pred eCc------C---CceeeEEEEcCCC
Q 040421 76 VGV------G---NATRQFSFTTPPG 92 (407)
Q Consensus 76 v~~------~---~~s~~~~F~T~p~ 92 (407)
|.. | .||....|+|.+.
T Consensus 176 VR~k~~~~~G~WSeWS~~~~~~t~~~ 201 (207)
T 1iar_B 176 VRAWAQAYNTTWSEWSPSTKWHNSYR 201 (207)
T ss_dssp EEEECGGGTCCCCCCCCCEEEC----
T ss_pred EEEecCCCCCCCCCCCcCeEEECCCC
Confidence 963 2 4778889998754
|
| >2q7n_A Leukemia inhibitory factor receptor; cytokine cell surface receptor complex LIFR LIF, cytokine RE cytokine complex; HET: NAG FUC MAN; 4.00A {Mus musculus} | Back alignment and structure |
|---|
Probab=82.46 E-value=2 Score=42.09 Aligned_cols=81 Identities=16% Similarity=0.163 Sum_probs=49.1
Q ss_pred ccCCCCCcEEEEEEcCCCCC----CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc--
Q 040421 5 QGDHEGKGVIVSWVTPDEPG----SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV-- 78 (407)
Q Consensus 5 ~g~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~-- 78 (407)
.....++++.|.|..+.... .-.|+|...++..+. ...... . .....+.+.|.+|+|+|.|..||..
T Consensus 395 v~~~s~~sl~LsW~pP~~~~g~~l~YeV~Yr~~~~~~w~-~~~~~~-----~-~~~~~~~v~l~~L~P~T~Y~~rVRA~~ 467 (488)
T 2q7n_A 395 VKDINSTVVTFSWYLPGNFTKINLLCQIEICKANSKKEV-RNATIR-----G-AEDSTYHVAVDKLNPYTAYTFRVRCSS 467 (488)
T ss_dssp EEECSTTCEEEEEEEEEECSSSEEEEEEEEBCTTSCCEE-EEEEEE-----C-CEEEEEEEEECSCCSSCCBBCCEEEEE
T ss_pred EEecCCCEEEEEEeCCCCCCCcceEEEEEEEECCCCCce-EEEEEe-----c-CCCcEEEEEeCCCCCCceEEEEEEEEE
Confidence 33335678999999874322 235677766543221 111110 0 0123566799999999999998853
Q ss_pred ---C---CceeeEEEEcCCC
Q 040421 79 ---G---NATRQFSFTTPPG 92 (407)
Q Consensus 79 ---~---~~s~~~~F~T~p~ 92 (407)
+ .||....|+|++.
T Consensus 468 ~g~G~WS~WS~~v~~~T~e~ 487 (488)
T 2q7n_A 468 KTFWKWSRWSDEKRHLTTEA 487 (488)
T ss_dssp SSCSSCCCCCCCCCBCCCCC
T ss_pred CCCCCCCCCcCCEeEECCCC
Confidence 2 4677778888653
|
| >3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=82.14 E-value=0.57 Score=46.73 Aligned_cols=79 Identities=16% Similarity=0.234 Sum_probs=47.2
Q ss_pred cCCCCCcEEEEEEcCCCCC----CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc---
Q 040421 6 GDHEGKGVIVSWVTPDEPG----SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV--- 78 (407)
Q Consensus 6 g~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~--- 78 (407)
.....+++.|.|..+.... .-.|+|....+..+..+.. ...........|.+|+|+|.|.+||..
T Consensus 210 ~~~~~~~v~l~W~~p~~~~~~~~~Y~v~~~~~~~~~w~~~~~--------~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~ 281 (589)
T 3l5h_A 210 SEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPP--------EDTASTRSSFTVQDLKPFTEYVFRIRCMKE 281 (589)
T ss_dssp TTTCTTCEEEECCCCGGGGTSCEEEEEEEEETTCSCCBCCCT--------TSSCSCCSEEEECSCCSSCCEEEEEEEEES
T ss_pred cCCCCCeEEEEeCCCCCCCeeeEEEEEEECCCCCCCcEEEcc--------ccCcCceeEEEECCCCCCCEEEEEEEEEeC
Confidence 4446789999998764221 2466777665433321100 001112345678999999999999954
Q ss_pred ---C---CceeeEEEEcCCC
Q 040421 79 ---G---NATRQFSFTTPPG 92 (407)
Q Consensus 79 ---~---~~s~~~~F~T~p~ 92 (407)
+ .||....|+|.+.
T Consensus 282 ~g~g~~S~~S~~~~~~T~~~ 301 (589)
T 3l5h_A 282 DGKGYWSDWSEEASGITYED 301 (589)
T ss_dssp SSCSCCCCCCCCBCCCCCCC
T ss_pred CCCCccCCCCCccccccCcc
Confidence 2 2356667777653
|
| >4doh_B Interleukin-20 receptor subunit beta; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=82.09 E-value=2.3 Score=36.28 Aligned_cols=72 Identities=10% Similarity=0.111 Sum_probs=43.7
Q ss_pred CCcEEEEEEcCCCCCCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc--------CCc
Q 040421 10 GKGVIVSWVTPDEPGSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV--------GNA 81 (407)
Q Consensus 10 ~~~~~v~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~--------~~~ 81 (407)
.+++.|.|.-+...-.-.|.|+..++....... .+. .....++|.+|+|+|.|..+|.. +..
T Consensus 121 ~~~i~V~~~~p~~~l~Y~v~y~~~~~~~~~~~~----~~~------~~~~~~~i~~L~p~t~Ycv~Vra~~~~~~~~g~~ 190 (206)
T 4doh_B 121 GFHLVIELEDLGPQFEFLVAYWRREPGAEEHVK----MVR------SGGIPVHLETMEPGAAYCVKAQTFVKAIGRYSAF 190 (206)
T ss_dssp TTEEEEEECCCCTTCEEEEEEEESSSSCCCEEE----EEC------CSSSEEEEEECCSSSCEEEEEEEEEGGGTEECCC
T ss_pred CCEEEEEecCCCCcEEEEEEEEEcCCCceeEEe----EEc------cCCeEEEEeCCCCCCcEEEEEEEEecCCCCCCCC
Confidence 578999998652223567888887653321111 010 01134789999999999999853 245
Q ss_pred eeeEEEEcCC
Q 040421 82 TRQFSFTTPP 91 (407)
Q Consensus 82 s~~~~F~T~p 91 (407)
|....|+|..
T Consensus 191 S~~~C~~t~~ 200 (206)
T 4doh_B 191 SQTECVEVQG 200 (206)
T ss_dssp CCCEEECC--
T ss_pred CCCEeEEccc
Confidence 6667777753
|
| >1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=81.85 E-value=2.2 Score=43.63 Aligned_cols=64 Identities=13% Similarity=0.063 Sum_probs=38.2
Q ss_pred eeccCCCCCcEEEEEEcCCCC-C---CCEEEEeecCC--------CCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCC
Q 040421 3 ITQGDHEGKGVIVSWVTPDEP-G---SNTVLYWAENS--------TLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDT 70 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~-~---~~~v~y~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t 70 (407)
|.+.+..+++++|.|...... . ...|+|....+ ..+..+.. .....++|++|+|+|
T Consensus 167 l~v~~~~~~sv~l~W~pp~~~~~~~i~Y~V~~r~~~g~~~~~~~~~~w~~v~~------------~~~~~~~i~~L~P~t 234 (680)
T 1zlg_A 167 LRFTELQSGQLEVKWSSKFNISIEPVIYVVQRRWNYGIHPSEDDATHWQTVAQ------------TTDERVQLTDIRPSR 234 (680)
T ss_pred ceEEeccCceEEEEEeCCCCCCCCCEEEEEEEEECCCCCcCccccCceEEEEe------------cCCCeEEeCCCCCCC
Confidence 444555678999999986321 1 13566665422 11221111 012246789999999
Q ss_pred EEEEEeCc
Q 040421 71 KYYYEVGV 78 (407)
Q Consensus 71 ~Y~Y~v~~ 78 (407)
.|.|||..
T Consensus 235 ~Y~frV~A 242 (680)
T 1zlg_A 235 WYQFRVAA 242 (680)
T ss_pred EEEEEEEE
Confidence 99999954
|
| >3e0g_A Leukemia inhibitory factor receptor; IG domain, cytokine binding homology region (CHR), cell MEMB disease mutation, glycoprotein, membrane; HET: NAG MAN FUC; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=81.64 E-value=0.72 Score=45.16 Aligned_cols=82 Identities=16% Similarity=0.136 Sum_probs=50.1
Q ss_pred eeccCCCCCcEEEEEEcCCCC----CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 3 ITQGDHEGKGVIVSWVTPDEP----GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
|++....++++.|.|..+... -.-.|+|....+..... .+.... .....+.+.|.+|+|+|.|..||..
T Consensus 388 l~v~~~~stsl~LsW~~P~~~~~~~L~YeVrYr~~~~~~~~~------~vsv~~-~~~~~~s~~l~~L~PgT~Y~vrVRA 460 (483)
T 3e0g_A 388 FKVKDINSTAVKLSWHLPGNFAKINFLCEIEIKKSNSVQEQR------NVTIQG-VENSSYLVALDKLNPYTLYTFRIRC 460 (483)
T ss_dssp EEECCSSSSSCCEEEECCSCCTTSBCCCEEEEECSSSCCCEE------ECCCBC-CSSSBCCCCCCSCCSSSSCEEEEEC
T ss_pred eEEEEecCCeEEEEECCCCCCCCceEEEEEEEEECCCCCceE------EEEEec-cCCceeEEEEeccCCCcEEEEEEEE
Confidence 344344467899999987432 14688898876432110 111000 0112345679999999999999964
Q ss_pred C--------CceeeEEEEcCC
Q 040421 79 G--------NATRQFSFTTPP 91 (407)
Q Consensus 79 ~--------~~s~~~~F~T~p 91 (407)
. .||+...|+|+.
T Consensus 461 ~~~g~g~WSeWS~~~~f~T~E 481 (483)
T 3e0g_A 461 STETFWKWSKWSNKKQHLTTE 481 (483)
T ss_dssp CCSSCCCCCCCCCCCCCCCCC
T ss_pred eeCCCCCcCCCCCceeeECCC
Confidence 2 467777888864
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 407 | ||||
| d2qfra2 | 312 | d.159.1.1 (A:121-432) Plant purple acid phosphatas | 1e-105 | |
| d2qfra1 | 112 | b.1.12.1 (A:9-120) Purple acid phosphatase, N-term | 3e-32 | |
| d1xzwa1 | 119 | b.1.12.1 (A:1-119) Purple acid phosphatase, N-term | 4e-29 | |
| d1utea_ | 302 | d.159.1.1 (A:) Mammalian purple acid phosphatase { | 1e-13 | |
| d2nxfa1 | 320 | d.159.1.12 (A:3-322) Uncharacterized C17orf48 homo | 3e-06 | |
| d1uena_ | 125 | b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens | 0.001 | |
| d2hy1a1 | 256 | d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide pho | 0.003 |
| >d2qfra2 d.159.1.1 (A:121-432) Plant purple acid phosphatase, catalytic domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Plant purple acid phosphatase, catalytic domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 311 bits (798), Expect = e-105
Identities = 225/309 (72%), Positives = 257/309 (83%)
Query: 93 VGPDVPYTFGLIGDLGQTYYSNRTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDT 152
G DVPYTFGLIGDLGQ++ SN TL+HYEL+P KGQTVLFVGDLSYAD YP HDN RWDT
Sbjct: 2 TGLDVPYTFGLIGDLGQSFDSNTTLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDT 61
Query: 153 WGRFIERNAAYQPWIWTVGNHEIDFAPQLGEAIPFKPFANRFHLPYRAPYSTAPFWYSIR 212
WGRF ER+ AYQPWIWT GNHEI+FAP++ E PFKPF+ R+H+PY A ST+PFWYSI+
Sbjct: 62 WGRFTERSVAYQPWIWTAGNHEIEFAPEINETEPFKPFSYRYHVPYEASQSTSPFWYSIK 121
Query: 213 RASAHIIVMSCYSAFGKYTPQYKWLEKEFPKVNRSETPWLIVLMHCPLYNSYVHHYMEGE 272
RASAHIIV+S YSA+G+ TPQY WL+KE KV RSETPWLIVLMH PLYNSY HH+MEGE
Sbjct: 122 RASAHIIVLSSYSAYGRGTPQYTWLKKELRKVKRSETPWLIVLMHSPLYNSYNHHFMEGE 181
Query: 273 PMRVLYEPWFVEYKVDVVFAAHVHAYERSERMSNIAYNVTNALCSPVSDQSAPVYITIGD 332
MR +E WFV+YKVDVVFA HVHAYERSER+SNIAY +TN LC+PV DQSAPVYITIGD
Sbjct: 182 AMRTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKITNGLCTPVKDQSAPVYITIGD 241
Query: 333 GGNQEGLAKEMTEPQPRYSAYREASFGHGILDVKNRTHAYFGWHRNQDDYAVEADSVWLH 392
GN + M +PQP YSA+REASFGHG+ D+KNRTHA+F W+RNQD AVEADSVW
Sbjct: 242 AGNYGVIDSNMIQPQPEYSAFREASFGHGMFDIKNRTHAHFSWNRNQDGVAVEADSVWFF 301
Query: 393 NRYWKPSGE 401
NR+W P +
Sbjct: 302 NRHWYPVDD 310
|
| >d2qfra1 b.1.12.1 (A:9-120) Purple acid phosphatase, N-terminal domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} Length = 112 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Score = 115 bits (290), Expect = 3e-32
Identities = 54/91 (59%), Positives = 69/91 (75%)
Query: 1 VHITQGDHEGKGVIVSWVTPDEPGSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHH 60
VHITQGD G+ +I+SWVT DEPGS+ V YW+E + K+ A G + TY +FNY+S IHH
Sbjct: 22 VHITQGDLVGRAMIISWVTMDEPGSSAVRYWSEKNGRKRIAKGKMSTYRFFNYSSGFIHH 81
Query: 61 CTIEDLEFDTKYYYEVGVGNATRQFSFTTPP 91
TI L+++TKYYYEVG+ N TR+FSF TPP
Sbjct: 82 TTIRKLKYNTKYYYEVGLRNTTRRFSFITPP 112
|
| >d1xzwa1 b.1.12.1 (A:1-119) Purple acid phosphatase, N-terminal domain {Sweet potato (Ipomoea batatas) [TaxId: 4120]} Length = 119 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Sweet potato (Ipomoea batatas) [TaxId: 4120]
Score = 107 bits (269), Expect = 4e-29
Identities = 60/92 (65%), Positives = 75/92 (81%), Gaps = 1/92 (1%)
Query: 1 VHITQGDHEGKGVIVSWVTP-DEPGSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIH 59
VHITQGD+EG+GVI+SW TP D+ G+N V YW+ENS +++A G V+TY Y+NYTS IH
Sbjct: 28 VHITQGDYEGRGVIISWTTPYDKAGANKVFYWSENSKSQKRAMGTVVTYKYYNYTSAFIH 87
Query: 60 HCTIEDLEFDTKYYYEVGVGNATRQFSFTTPP 91
HCTI+DLE+DTKYYY +G G+A RQF F TPP
Sbjct: 88 HCTIKDLEYDTKYYYRLGFGDAKRQFWFVTPP 119
|
| >d1utea_ d.159.1.1 (A:) Mammalian purple acid phosphatase {Pig (Sus scrofa) [TaxId: 9823]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Mammalian purple acid phosphatase species: Pig (Sus scrofa) [TaxId: 9823]
Score = 68.7 bits (166), Expect = 1e-13
Identities = 35/246 (14%), Positives = 77/246 (31%), Gaps = 33/246 (13%)
Query: 95 PDVPYTFGLIGDLGQTYYSNRTLTHY---------ELNPIKGQTVLFVGDLSYADDYPFH 145
P F +GD G + + + +L +GD Y
Sbjct: 1 PTPILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKTLGADFILSLGDNFYFTGVHDA 60
Query: 146 DNNRWDTWGRFIERNAAYQPWIWTVGNHEIDFAPQLGEAIPFKPFANRFHLPYRAPYSTA 205
+ R+ + + + + W V D + I + + R++ P +PY
Sbjct: 61 KDKRFQETFEDVFSDPSLRNVPWHVLAGNHDHLGNVSAQIAYSKISKRWNFP--SPYYRL 118
Query: 206 PFWYSIRRASAHIIVMSCYSAFGKYTP-----------------QYKWLEKEFPKVNRSE 248
F S I ++ + G Q W++K+ + ++
Sbjct: 119 RFKIPRSNVSVAIFMLDTVTLCGNSDDFVSQQPERPRNLALARTQLAWIKKQ---LAAAK 175
Query: 249 TPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAYERSERMSNIA 308
+++V H P+++ H + P +KV H H + + + +
Sbjct: 176 EDYVLVAGHYPVWSIAEHGPT--HCLVKQLLPLLTTHKVTAYLCGHDHNLQYLQDENGLG 233
Query: 309 YNVTNA 314
+ ++ A
Sbjct: 234 FVLSGA 239
|
| >d2nxfa1 d.159.1.12 (A:3-322) Uncharacterized C17orf48 homolog zgc:64213 {Zebrafish (Danio rerio) [TaxId: 7955]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: ADPRibase-Mn-like domain: Uncharacterized C17orf48 homolog zgc:64213 species: Zebrafish (Danio rerio) [TaxId: 7955]
Score = 46.7 bits (109), Expect = 3e-06
Identities = 24/254 (9%), Positives = 49/254 (19%), Gaps = 52/254 (20%)
Query: 130 VLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQ-PWIWTVGNHEID--FAPQLGEAIP 186
V+ +GD+ D + + + A GNHE P L +
Sbjct: 53 VVQLGDI--IDGHNRRRDASDRALDTVMAELDACSVDVHHVWGNHEFYNFSRPSLLSSRL 110
Query: 187 FKPFANRFHLPYRAPYSTAPFWYSIRRASAHIIVMSCYSAFGKYTP-------------- 232
+ + +++ Y
Sbjct: 111 NSAQRTGTDTGSDLIGDDIYAYEFSPAPNFRFVLLDAYDLSVIGREEESEKHTHSWRILT 170
Query: 233 --------------------------------QYKWLEKEFPKVNRSETPWLIVLMHCPL 260
Q +WL+ + + ++ H P+
Sbjct: 171 QHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDHKQERV-LIFSHLPV 229
Query: 261 YNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAYERSERMSNIAYNVTNALCSPVS 320
+ + V A H H R S + +
Sbjct: 230 HPCAADPICLAWNHEAVLSVLRSHQSVLCFIAGHDHDGGRCTDSSGAQHITLEGVIETPP 289
Query: 321 DQSAPVYITIGDGG 334
A + +
Sbjct: 290 HSHAFATAYLYEDR 303
|
| >d1uena_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]} Length = 125 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA0343 protein species: Human (Homo sapiens) [TaxId: 9606]
Score = 36.4 bits (83), Expect = 0.001
Identities = 18/92 (19%), Positives = 21/92 (22%), Gaps = 9/92 (9%)
Query: 13 VIVSWVTPDEPGSNTVL---YWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFD 69
V W L T H + LE
Sbjct: 31 AEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPF 90
Query: 70 TKYYYEV------GVGNATRQFSFTTPPGVGP 95
+ Y V G G A+ F TP G GP
Sbjct: 91 SHYTLNVRVVNGKGEGPASPDRVFNTPEGSGP 122
|
| >d2hy1a1 d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide phosphodiesterase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Rv0805 cyclic nucleotide phosphodiesterase species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 36.7 bits (83), Expect = 0.003
Identities = 29/222 (13%), Positives = 58/222 (26%), Gaps = 16/222 (7%)
Query: 114 NRTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNH 173
L + ++ ++F GDL+ + + R + A +W +GNH
Sbjct: 33 GELLEQLNQSGLRPDAIVFTGDLADKGEPAAYRKLRGLVEPFAAQLGA---ELVWVMGNH 89
Query: 174 EIDFAPQLGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRRASAHIIVMSCYSAFGKYTPQ 233
+ + +F L + I ++ S
Sbjct: 90 D------------DRAELRKFLLDEAPSMAPLDRVCMIDGLRIIVLDTSVPGHHHGEIRA 137
Query: 234 YKWLEKEFPKVNRSETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAA 293
+ + ++ L H P+ + + V + A
Sbjct: 138 SQLGWLAEELATPAPDGTILALHHPPIPSVLDMAVTVELRDQAALGRVLRGTDVRAILAG 197
Query: 294 HVHAYERSERMSNIAYNVTNALCSPVSDQSAPVYITIGDGGN 335
H+H + I +V +A C A DG
Sbjct: 198 HLHYSTNATF-VGIPVSVASATCYTQDLTVAAGGTRGRDGAQ 238
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 407 | |||
| d2qfra2 | 312 | Plant purple acid phosphatase, catalytic domain {K | 100.0 | |
| d1utea_ | 302 | Mammalian purple acid phosphatase {Pig (Sus scrofa | 100.0 | |
| d2hy1a1 | 256 | Rv0805 cyclic nucleotide phosphodiesterase {Mycoba | 99.91 | |
| d3d03a1 | 271 | Glycerophosphodiesterase GpdQ {Enterobacter aeroge | 99.88 | |
| d2qfra1 | 112 | Purple acid phosphatase, N-terminal domain {Kidney | 99.86 | |
| d2nxfa1 | 320 | Uncharacterized C17orf48 homolog zgc:64213 {Zebraf | 99.84 | |
| d1xzwa1 | 119 | Purple acid phosphatase, N-terminal domain {Sweet | 99.84 | |
| d1uf3a_ | 228 | Hypothetical protein TT1561 {Thermus thermophilus | 99.64 | |
| d2yvta1 | 257 | Uncharacterized protein Aq_1956 {Aquifex aeolicus | 99.59 | |
| d1z2wa1 | 182 | Vacuolar protein sorting 29, VPS29 {Mouse (Mus mus | 99.36 | |
| d2a22a1 | 193 | Vacuolar protein sorting 29, VPS29 {Cryptosporidiu | 99.34 | |
| d3ck2a1 | 173 | Uncharacterized protein SP1879 {Streptococcus pneu | 99.16 | |
| d1nnwa_ | 251 | Hypothetical protein PF1291 {Archaeon Pyrococcus f | 99.14 | |
| d1ii7a_ | 333 | Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | 99.08 | |
| d1s3la_ | 165 | Putative phosphodiesterase MJ0936 {Methanococcus j | 98.94 | |
| d1su1a_ | 184 | Phosphodiesterase yfcE {Escherichia coli [TaxId: 5 | 98.63 | |
| d1usha2 | 337 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 98.61 | |
| d1xm7a_ | 188 | Hypothetical protein aq_1666 {Aquifex aeolicus [Ta | 98.59 | |
| d3c9fa2 | 322 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 97.99 | |
| d2z1aa2 | 302 | 5'-nucleotidase (syn. UDP-sugar hydrolase), N-term | 97.83 | |
| d1x4xa1 | 93 | Fibronectin type-III domain containing protein 3a, | 97.55 | |
| d1x5aa1 | 94 | Ephrin type-A receptor 1 {Mouse (Mus musculus) [Ta | 97.52 | |
| d1x5xa1 | 96 | Fibronectin type-III domain containing protein 3a, | 97.39 | |
| d1qg3a1 | 92 | Integrin beta-4 subunit {Human (Homo sapiens) [Tax | 97.36 | |
| d2djsa1 | 95 | Ephrin type-B receptor 1 {Human (Homo sapiens) [Ta | 97.29 | |
| d1x5la1 | 98 | Ephrin type-A receptor 8 {Human (Homo sapiens) [Ta | 97.29 | |
| d1x5ka1 | 111 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 97.18 | |
| d2haza1 | 101 | Neural cell adhesion molecule 1, NCAM {Human (Homo | 97.18 | |
| d2crza1 | 97 | Fibronectin type-III domain containing protein 3a, | 97.11 | |
| d2b5ib2 | 104 | Interleukin-2 receptor beta chain {Human (Homo sap | 97.07 | |
| d1tdqa2 | 92 | Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | 97.06 | |
| d1x5fa1 | 107 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 96.98 | |
| d1cd9b2 | 106 | Granulocyte colony-stimulating factor (GC-SF) rece | 96.96 | |
| d2ibga1 | 95 | Hedgehog receptor iHog {Fruit fly (Drosophila mela | 96.95 | |
| d1fnfa3 | 89 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.95 | |
| d2d9qb2 | 105 | Granulocyte colony-stimulating factor (GC-SF) rece | 96.91 | |
| d2vkwa2 | 93 | Neural cell adhesion molecule 1, NCAM {Human (Homo | 96.9 | |
| d3d48r2 | 104 | Prolactin receptor {Human (Homo sapiens) [TaxId: 9 | 96.85 | |
| d1g5ba_ | 219 | lambda ser/thr protein phosphatase {Bacteriophage | 96.85 | |
| d1qr4a2 | 88 | Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | 96.85 | |
| d1owwa_ | 93 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.84 | |
| d1f6fb2 | 103 | Prolactin receptor {Rat (Rattus norvegicus) [TaxId | 96.82 | |
| d1tena_ | 90 | Tenascin {Human (Homo sapiens) [TaxId: 9606]} | 96.82 | |
| d1iarb2 | 101 | Interleukin-4 receptor alpha chain {Human (Homo sa | 96.78 | |
| d1tdqa1 | 93 | Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | 96.76 | |
| d1x5ja1 | 100 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 96.73 | |
| d1ujta_ | 120 | KIAA1568 protein {Human (Homo sapiens) [TaxId: 960 | 96.71 | |
| d1x5za1 | 102 | Receptor-type tyrosine-protein phosphatase delta, | 96.67 | |
| d1x4ya1 | 101 | Brother of CDO precursor (BOC) {Mouse (Mus musculu | 96.64 | |
| d1fnfa2 | 91 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.64 | |
| d2cuha1 | 102 | Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | 96.64 | |
| d1x5ga1 | 103 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 96.61 | |
| d1k85a_ | 88 | Fibronectin type III domain from chitinase A1. {Ba | 96.57 | |
| d2cuma1 | 93 | Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | 96.45 | |
| d2fnba_ | 95 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.4 | |
| d1fnaa_ | 91 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.38 | |
| d1wk0a_ | 137 | Fibronectin type-III domain containing protein 3a, | 96.37 | |
| d1fnha1 | 90 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.35 | |
| d2gysa2 | 114 | Common beta-chain in the GM-CSF, IL-3 and IL-5 rec | 96.29 | |
| d1qr4a1 | 87 | Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | 96.28 | |
| d1wfua_ | 120 | Fibronectin type 3 and ankyrin repeat domains 1 pr | 96.22 | |
| d1fnha2 | 90 | Fibronectin, different Fn3 modules {Human (Homo sa | 96.2 | |
| d1erna2 | 105 | Erythropoietin (EPO) receptor {Human (Homo sapiens | 96.19 | |
| d2ic2a1 | 107 | Hedgehog receptor iHog {Fruit fly (Drosophila mela | 96.19 | |
| d1wf5a1 | 108 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 96.02 | |
| d2z06a1 | 252 | Hypothetical protein TTHA0625 {Thermus thermophilu | 95.99 | |
| d2b5ic1 | 95 | Cytokine receptor common gamma chain {Human (Homo | 95.97 | |
| d1t71a_ | 281 | Hypothetical protein MPN349 {Mycoplasma pneumoniae | 95.96 | |
| d1tdqa3 | 86 | Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | 95.96 | |
| d1x5ya1 | 98 | Myosin binding protein C, fast-type {Mouse (Mus mu | 95.96 | |
| d1x3da1 | 105 | Fibronectin type-III domain containing protein 3a, | 95.94 | |
| d1t70a_ | 255 | Putative phosphatase DR1281 {Deinococcus radiodura | 95.93 | |
| d1fnfa1 | 94 | Fibronectin, different Fn3 modules {Human (Homo sa | 95.92 | |
| d1va9a1 | 109 | Down syndrome cell adhesion molecule-like protein | 95.92 | |
| d1j8ka_ | 94 | Fibronectin, different Fn3 modules {Human (Homo sa | 95.88 | |
| d1v5ja_ | 108 | KIAA1355 {Human (Homo sapiens) [TaxId: 9606]} | 95.85 | |
| d2crma1 | 107 | Fibronectin type-III domain containing protein 3a, | 95.84 | |
| d1x5ha1 | 119 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 95.82 | |
| d1uc6a_ | 109 | Ciliary neurotrophic factor receptor alpha {Human | 95.82 | |
| d2cuia1 | 101 | Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | 95.75 | |
| d1x4za1 | 108 | Brother of CDO precursor (BOC) {Mouse (Mus musculu | 95.68 | |
| d1wfoa1 | 117 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 95.67 | |
| d1fnha3 | 89 | Fibronectin, different Fn3 modules {Human (Homo sa | 95.63 | |
| d1wisa1 | 111 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 95.62 | |
| d1bqua2 | 115 | Cytokine receptor gp130 cytokine-binding domains { | 95.58 | |
| d2dn7a1 | 94 | Receptor-type tyrosine-protein phosphatase F, PTPR | 95.5 | |
| d1wfna1 | 106 | Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | 95.46 | |
| d1n26a3 | 104 | Interleukin-6 receptor alpha chain, domains 2 and | 95.45 | |
| d1uena_ | 125 | KIAA0343 protein {Human (Homo sapiens) [TaxId: 960 | 95.44 | |
| d1axib2 | 106 | Growth hormone receptor {Human (Homo sapiens) [Tax | 95.43 | |
| d1ueya_ | 127 | KIAA0343 protein {Human (Homo sapiens) [TaxId: 960 | 95.36 | |
| d1cfba1 | 100 | Neuroglian, two amino proximal Fn3 repeats {Drosop | 95.03 | |
| d1uema_ | 117 | KIAA1568 protein {Human (Homo sapiens) [TaxId: 960 | 94.74 | |
| d1wfta_ | 123 | Host cell factor 2, HCF-2 {Mouse (Mus musculus) [T | 94.73 | |
| d1bpva_ | 104 | Type I titin module {Human (Homo sapiens) [TaxId: | 94.73 | |
| d1qg3a2 | 103 | Integrin beta-4 subunit {Human (Homo sapiens) [Tax | 94.1 | |
| d1s95a_ | 324 | Serine/threonine protein phosphatase 5, PP5 {Human | 93.91 | |
| d1cfba2 | 105 | Neuroglian, two amino proximal Fn3 repeats {Drosop | 93.86 | |
| d1jk7a_ | 294 | Protein phosphatase-1 (PP-1) {Human (Homo sapiens) | 93.28 | |
| d2dtge3 | 125 | Insulin receptor {Human (Homo sapiens) [TaxId: 960 | 93.2 | |
| d3c5wc1 | 288 | Protein phosphatase 2A catalytic subunit alpha iso | 92.6 | |
| d1cd9b1 | 107 | Granulocyte colony-stimulating factor (GC-SF) rece | 92.23 | |
| d2gysa4 | 100 | Common beta-chain in the GM-CSF, IL-3 and IL-5 rec | 92.12 | |
| d1auia_ | 473 | Protein phosphatase-2B (PP-2B, calcineurin A subun | 91.58 | |
| d1wj3a_ | 117 | Contactin 3 (KIAA1496) {Human (Homo sapiens) [TaxI | 91.06 | |
| d2dtge1 | 102 | Insulin receptor {Human (Homo sapiens) [TaxId: 960 | 90.74 | |
| d1x5ia1 | 113 | Neogenin {Human (Homo sapiens) [TaxId: 9606]} | 90.71 | |
| d1bqua1 | 95 | Cytokine receptor gp130 cytokine-binding domains { | 85.0 | |
| d2dtge2 | 196 | Insulin receptor {Human (Homo sapiens) [TaxId: 960 | 80.5 | |
| d1fyhb1 | 98 | Interferon-gamma receptor alpha chain {Human (Homo | 80.41 |
| >d2qfra2 d.159.1.1 (A:121-432) Plant purple acid phosphatase, catalytic domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Plant purple acid phosphatase, catalytic domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=100.00 E-value=2.3e-63 Score=467.48 Aligned_cols=308 Identities=73% Similarity=1.299 Sum_probs=267.7
Q ss_pred CCCCCcEEEEEecCCCCCCchhhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccCCeEEccCCC
Q 040421 94 GPDVPYTFGLIGDLGQTYYSNRTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNH 173 (407)
Q Consensus 94 ~~~~~~~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNH 173 (407)
+++.++||+++||+|.......++.++.....+|||||++||++|.++....+..+|+.|++.++++.+.+|+++++|||
T Consensus 3 g~~~p~~F~v~GD~g~~~~~~~~~~~~~~~~~~pdfvl~~GDl~Y~~~~~~~~~~~wd~~~~~~~~~~~~~P~~~~~GNH 82 (312)
T d2qfra2 3 GLDVPYTFGLIGDLGQSFDSNTTLSHYELSPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTERSVAYQPWIWTAGNH 82 (312)
T ss_dssp CSSCCEEEEEECSCCSBHHHHHHHHHHHHCSSCCSEEEECSCCCCGGGSGGGCTHHHHHHHHHHHHHHTTSCEEECCCGG
T ss_pred CCCCCEEEEEEeeCCCCCchHHHHHHHHHcCCCCCEEEECCCCCcCCCCcccchHHHHHHHHHHHHHhhcceEEEecccc
Confidence 45679999999999987666666666544335899999999999988765556789999999999998899999999999
Q ss_pred ccccCCCCCCcccccccccccccCCCCCCCCCCeEEEEecCcEEEEEEeccccCCCChHHHHHHHHhccccCCCCCCeEE
Q 040421 174 EIDFAPQLGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRRASAHIIVMSCYSAFGKYTPQYKWLEKEFPKVNRSETPWLI 253 (407)
Q Consensus 174 D~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ysf~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~i 253 (407)
|+...+..+....+..|..+|.+|.+++....+.||+|++|+++||+||++..+....+|++||+++|+++++++++|+|
T Consensus 83 D~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~Ysf~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~i 162 (312)
T d2qfra2 83 EIEFAPEINETEPFKPFSYRYHVPYEASQSTSPFWYSIKRASAHIIVLSSYSAYGRGTPQYTWLKKELRKVKRSETPWLI 162 (312)
T ss_dssp GTCCBGGGTBCSTTHHHHHHCCCCGGGGTCSSTTSEEEEETTEEEEECCTTSCCSTTSHHHHHHHHHHHTCCTTTCCEEE
T ss_pred cccccccccccccccchhhhccCCccccCCCCCceEEEEECCEEEEEeeccccccchHHHHHHHHHHHHHHhhcCCCEEE
Confidence 98654433444556778889999998777778889999999999999999888778899999999999998888899999
Q ss_pred EEeeccccccCCCCCCCChhHHHHHHHHHHhCCCcEEEeccccccccccccccceeeccCCcccccCCCCCceEEEeCCC
Q 040421 254 VLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAYERSERMSNIAYNVTNALCSPVSDQSAPVYITIGDG 333 (407)
Q Consensus 254 v~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~g~~~iv~G~g 333 (407)
|++|+|+|++...+...++.+|+.|++||++++||+||+||+|+|||++|+++++....++.+.++.++.|++|||+|+|
T Consensus 163 v~~H~P~y~~~~~~~~~~~~~r~~l~~l~~~~~Vdlv~~GH~H~YeRt~p~~~~~~~~~~~~~~~~~~~~g~vyiv~G~g 242 (312)
T d2qfra2 163 VLMHSPLYNSYNHHFMEGEAMRTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKITNGLCTPVKDQSAPVYITIGDA 242 (312)
T ss_dssp EECSSCSSCCBSTTTTTTHHHHHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSSSCCCSCEECTTSCEEEEECCS
T ss_pred EEccccccccCCCCcccchhHHHHHHHHHHHcCcEEEEEccCcceEEEeeccCCcccccCCccccccCCCcCEEEEECcC
Confidence 99999999987766556778999999999999999999999999999999999887777888888889999999999999
Q ss_pred CCCCCCcccCCCCCCCccceeeCcceEEEEEEeeccEEEEEEEEcCCCceeeeeeEEEEecccCCCCC
Q 040421 334 GNQEGLAKEMTEPQPRYSAYREASFGHGILDVKNRTHAYFGWHRNQDDYAVEADSVWLHNRYWKPSGE 401 (407)
Q Consensus 334 G~~~~~~~~~~~~~p~~~~~~~~~~Gf~~l~v~~~~~~~~~~~~~~~g~~~~~D~~~i~~~~~~~~~~ 401 (407)
|+.++....+..++|.|++++...+||++|+|.|.++|.|+|+++.||+++..|+|+|.|+.++|-+.
T Consensus 243 G~~~~~~~~~~~~~~~~s~~~~~~~G~~~l~v~n~t~l~~~~~~~~d~~~~~~D~~~i~~~~~~~~~~ 310 (312)
T d2qfra2 243 GNYGVIDSNMIQPQPEYSAFREASFGHGMFDIKNRTHAHFSWNRNQDGVAVEADSVWFFNRHWYPVDD 310 (312)
T ss_dssp CTTSCCCCCBCSSCCTTEEEEECCCEEEEEEECSSSEEEEEEEESSSCTTCCSEEEEEECTTTCCCCC
T ss_pred CCcccccccccCCCCCeeEEEecCCCEEEEEEEcCCeEEEEEEECCCCCEEeeeEEEEEeCCCCCCCC
Confidence 98765545566678899999999999999999999999999999999999878999999999888654
|
| >d1utea_ d.159.1.1 (A:) Mammalian purple acid phosphatase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Purple acid phosphatase-like domain: Mammalian purple acid phosphatase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=100.00 E-value=5.1e-36 Score=279.23 Aligned_cols=260 Identities=16% Similarity=0.250 Sum_probs=179.6
Q ss_pred CCcEEEEEecCCCCCCch----------hhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHH-h-hhhccC
Q 040421 97 VPYTFGLIGDLGQTYYSN----------RTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFI-E-RNAAYQ 164 (407)
Q Consensus 97 ~~~~f~~~gD~~~~~~~~----------~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~-~-~~~~~~ 164 (407)
..+||+++||+|...... ..+.+.++. .+|||||++||++|.++.......+|..+...+ . .....+
T Consensus 3 ~~~~F~vigD~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~dfvl~~GD~vy~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (302)
T d1utea_ 3 PILRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKT-LGADFILSLGDNFYFTGVHDAKDKRFQETFEDVFSDPSLRNV 81 (302)
T ss_dssp CCEEEEEECSCCCCSSTTSSCHHHHHHHHHHHHHHHH-HCCSEEEECSCCSTTTCCSSTTCTHHHHHTTTTSCSGGGTTC
T ss_pred CCeEEEEEecCCCCCCcccccHHHHHHHHHHHHHHhh-CCCCEEEECCCCCCCCCCCcccHHHHHHHHHHHhhhhhhcCC
Confidence 479999999998764321 122223333 389999999999998876544455665544322 2 234579
Q ss_pred CeEEccCCCccccCCCCCCcccccccccccccCCCCCCCCCCeEEEEec------CcEEEEEEecccc------C-----
Q 040421 165 PWIWTVGNHEIDFAPQLGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRR------ASAHIIVMSCYSA------F----- 227 (407)
Q Consensus 165 P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ysf~~------g~v~fi~Lds~~~------~----- 227 (407)
|+++++||||+..+. .....+..+..++.+|. .||++.+ ++++|++||+... .
T Consensus 82 P~~~~~GNHD~~~~~--~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~ldt~~~~~~~~~~~~~~~ 151 (302)
T d1utea_ 82 PWHVLAGNHDHLGNV--SAQIAYSKISKRWNFPS--------PYYRLRFKIPRSNVSVAIFMLDTVTLCGNSDDFVSQQP 151 (302)
T ss_dssp CEEECCCHHHHHSCH--HHHHHGGGTSTTEECCS--------SSEEEEEECTTSSCEEEEEECCHHHHHCCGGGSTTCSC
T ss_pred ceEEeeccccccccc--ccccchhhccccccCCC--------cccceeecccCCCCcEEEEEccceeEeecccccccccc
Confidence 999999999985321 11112233344455553 3566553 4699999998420 0
Q ss_pred ------CCChHHHHHHHHhccccCCCCCCeEEEEeeccccccCCCCCCCChhHHHHHHHHHHhCCCcEEEeccccccccc
Q 040421 228 ------GKYTPQYKWLEKEFPKVNRSETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAYERS 301 (407)
Q Consensus 228 ------~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~ 301 (407)
...++|++||+++|++ .+.+|+||++|||+++.... ......+..|.+||++++|++|||||+|.|+|+
T Consensus 152 ~~~~~~~~~~~Q~~WL~~~L~~---~~~~~~iv~~h~~~~~~~~~--~~~~~~~~~~~~ll~~~~v~~~~~GH~H~~~r~ 226 (302)
T d1utea_ 152 ERPRNLALARTQLAWIKKQLAA---AKEDYVLVAGHYPVWSIAEH--GPTHCLVKQLLPLLTTHKVTAYLCGHDHNLQYL 226 (302)
T ss_dssp CSCSCHHHHHHHHHHHHHHHHH---CCCSEEEEECSSCSSCCSSS--CCCHHHHHHTHHHHHHTTCSEEEECSSSSEEEE
T ss_pred cccccchhHHHHHHHHHHHHHh---hccCceEEEEeccccccCCC--CCchhhhhhhhHHHHhcCceEEEeCCCcceEEE
Confidence 0136899999999998 56689999999999987643 345678889999999999999999999999998
Q ss_pred cccccceeeccCCcccccCCCCCceEEEeCCCCCCCCCcccCCCC---CCCcc-ceeeCcceEEEEEEeeccEEEEEEEE
Q 040421 302 ERMSNIAYNVTNALCSPVSDQSAPVYITIGDGGNQEGLAKEMTEP---QPRYS-AYREASFGHGILDVKNRTHAYFGWHR 377 (407)
Q Consensus 302 ~~~~~~~~~~~~g~~~~~~~~~g~~~iv~G~gG~~~~~~~~~~~~---~p~~~-~~~~~~~Gf~~l~v~~~~~~~~~~~~ 377 (407)
.+ .+++.||++|+||............ .+.+. ......+||++|+|. ++.++++|+.
T Consensus 227 ~~------------------~~~~~~i~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gf~~~~v~-~~~l~~~~~~ 287 (302)
T d1utea_ 227 QD------------------ENGLGFVLSGAGNFMDPSKKHLRKVPNGYLRFHFGAENSLGGFAYVEIT-PKEMSVTYIE 287 (302)
T ss_dssp EC------------------TTCCEEEEECBSSCCCCCCTTGGGSCTTCEEEEECCTTSCCEEEEEEEC-SSCEEEEEEE
T ss_pred ec------------------CCccEEEEeCCCCCCCCCccccccCCCcccceeecccCCcceEEEEEEE-CCEEEEEEEe
Confidence 63 4678899999988764321111111 11111 112346899999994 5679999975
Q ss_pred cCCCceeeeeeEEEEec
Q 040421 378 NQDDYAVEADSVWLHNR 394 (407)
Q Consensus 378 ~~~g~~~~~D~~~i~~~ 394 (407)
.+|+++ |+++|.+|
T Consensus 288 -~~G~~~--~~~~~~~~ 301 (302)
T d1utea_ 288 -ASGKSL--FKTKLPRR 301 (302)
T ss_dssp -TTSCEE--EEEEECCC
T ss_pred -CCCCEE--EEEEecCC
Confidence 799986 99999775
|
| >d2hy1a1 d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide phosphodiesterase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Rv0805 cyclic nucleotide phosphodiesterase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.91 E-value=5.4e-24 Score=193.08 Aligned_cols=227 Identities=16% Similarity=0.148 Sum_probs=138.1
Q ss_pred CCcEEEEEecCCCCCCc---------hh----hHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhh--
Q 040421 97 VPYTFGLIGDLGQTYYS---------NR----TLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNA-- 161 (407)
Q Consensus 97 ~~~~f~~~gD~~~~~~~---------~~----~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~-- 161 (407)
..|||+.++|+|..... .. +++.+.+...+|||||++||++... ....++.+.+.++++.
T Consensus 3 ~~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~pD~vl~~GDl~~~g-----~~~~~~~~~~~l~~~~~~ 77 (256)
T d2hy1a1 3 PDYVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLADKG-----EPAAYRKLRGLVEPFAAQ 77 (256)
T ss_dssp CSEEEEEECCCCBC----------CHHHHHHHHHHHHHHHTCCCSEEEECSCCBSSC-----CHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEeeCccCCCCcccccCcCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCC-----ChhHHHHHHHHhhhhhhh
Confidence 48999999999974321 12 2333433224899999999999532 2355666777666553
Q ss_pred ccCCeEEccCCCccccCCCCCCcccccccccccccCCCCCCCCCCeEEEEecCcEEEEEEeccccC----CCChHHHHHH
Q 040421 162 AYQPWIWTVGNHEIDFAPQLGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRRASAHIIVMSCYSAF----GKYTPQYKWL 237 (407)
Q Consensus 162 ~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ysf~~g~v~fi~Lds~~~~----~~~~~Q~~WL 237 (407)
..+|+++++||||... .+...+.... .......|++..++++|++|||.... ....+|++||
T Consensus 78 ~~~p~~~v~GNHD~~~-----------~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ldt~~~~~~~g~~~~~~~~wl 143 (256)
T d2hy1a1 78 LGAELVWVMGNHDDRA-----------ELRKFLLDEA---PSMAPLDRVCMIDGLRIIVLDTSVPGHHHGEIRASQLGWL 143 (256)
T ss_dssp HTCEEEECCCTTSCHH-----------HHHHHTTCCC---CCCSCCCEEEEETTEEEEECCCBCTTCSSBCCCHHHHHHH
T ss_pred cCCCEEEEcccccchh-----------hhhhhhcccc---ccccccceEEEecccceeeeeeeecCCcCCcccHHHHHHH
Confidence 2589999999999631 1111111110 11234568889999999999986432 2357899999
Q ss_pred HHhccccCCCCCCeEEEEeeccccccCCCCC-CCChhHHHHHHHHHHhCCCcEEEeccccccccccccccceeeccCCcc
Q 040421 238 EKEFPKVNRSETPWLIVLMHCPLYNSYVHHY-MEGEPMRVLYEPWFVEYKVDVVFAAHVHAYERSERMSNIAYNVTNALC 316 (407)
Q Consensus 238 ~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~-~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~~~~~~~~~~g~~ 316 (407)
++.|++. +.+.+||++|||++....... .....-.+.+..++++++|+++||||.|......
T Consensus 144 ~~~L~~~---~~~~~iv~~Hhpp~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~GH~H~~~~~~-------------- 206 (256)
T d2hy1a1 144 AEELATP---APDGTILALHHPPIPSVLDMAVTVELRDQAALGRVLRGTDVRAILAGHLHYSTNAT-------------- 206 (256)
T ss_dssp HHHHTSC---CTTCEEEECSSCSSCCSSHHHHTTSBCCHHHHHHHHTTSSEEEEEECSSSSCEEEE--------------
T ss_pred HHHHHhh---hccCceeeeecCCcccccccccccccccHHHHHHHHhccCceEEEccccchhhceE--------------
Confidence 9999873 334688999999976543210 1111224578889999999999999999754432
Q ss_pred cccCCCCCceEEEeCCCCCCCCCcccCCCCCCCccceeeCcceEEEEEEeecc
Q 040421 317 SPVSDQSAPVYITIGDGGNQEGLAKEMTEPQPRYSAYREASFGHGILDVKNRT 369 (407)
Q Consensus 317 ~~~~~~~g~~~iv~G~gG~~~~~~~~~~~~~p~~~~~~~~~~Gf~~l~v~~~~ 369 (407)
-+|+.++++|+....... . ..+.-........||..+++..++
T Consensus 207 -----~~gi~~~~~~s~~~~~~~--~---~~~~~~~~~~~~~g~~lv~v~~d~ 249 (256)
T d2hy1a1 207 -----FVGIPVSVASATCYTQDL--T---VAAGGTRGRDGAQGCNLVHVYPDT 249 (256)
T ss_dssp -----ETTEEEEECCCCC------------------------CEEEEEECSSC
T ss_pred -----ECCEEEEEcCCccccccc--c---CCCCCcccccCCCCEEEEEEECCC
Confidence 145667776654332110 0 111111222345789999996555
|
| >d3d03a1 d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ {Enterobacter aerogenes [TaxId: 548]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: GpdQ-like domain: Glycerophosphodiesterase GpdQ species: Enterobacter aerogenes [TaxId: 548]
Probab=99.88 E-value=6.4e-22 Score=180.82 Aligned_cols=182 Identities=12% Similarity=0.100 Sum_probs=118.9
Q ss_pred cEEEEEecCCCCCCc---------h----hhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccCC
Q 040421 99 YTFGLIGDLGQTYYS---------N----RTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQP 165 (407)
Q Consensus 99 ~~f~~~gD~~~~~~~---------~----~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P 165 (407)
++|+.++|+|..... . .+++.+.+...+||+||++||+++.. ....++.+.+.++.+ .+|
T Consensus 1 M~i~hiSD~Hl~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~D~vv~~GDl~~~~-----~~~~y~~~~~~l~~l--~~p 73 (271)
T d3d03a1 1 MLLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPDAVVVSGDIVNCG-----RPEEYQVARQILGSL--NYP 73 (271)
T ss_dssp CEEEEECCCCBCSTTCCBTTTBCHHHHHHHHHHHHHTCSSCCSEEEEESCCBSSC-----CHHHHHHHHHHHTTC--SSC
T ss_pred CEEEEEecCcCCCCccccccCcCHHHHHHHHHHHHHhcCCCCCEEEECcccCcCC-----cchhHHHHHHHHhcc--CCC
Confidence 589999999975321 1 22333433334899999999999642 234556666666654 589
Q ss_pred eEEccCCCccccCCCCCCccccccc-ccccccCCCCCCCCCCeEEEEecCcEEEEEEeccccC----CCChHHHHHHHHh
Q 040421 166 WIWTVGNHEIDFAPQLGEAIPFKPF-ANRFHLPYRAPYSTAPFWYSIRRASAHIIVMSCYSAF----GKYTPQYKWLEKE 240 (407)
Q Consensus 166 ~~~~~GNHD~~~~~~~~~~~~~~~~-~~~f~~P~~~~~~~~~~~ysf~~g~v~fi~Lds~~~~----~~~~~Q~~WL~~~ 240 (407)
+++++||||.... +..+ ...+.... .......|.++.++++||+||+.... ....+|++||+++
T Consensus 74 ~~~i~GNHD~~~~--------~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~i~ldt~~~~~~~~~l~~~ql~wL~~~ 142 (271)
T d3d03a1 74 LYLIPGNHDDKAL--------FLEYLQPLCPQLG---SDANNMRCAVDDFATRLLFIDSSRAGTSKGWLTDETISWLEAQ 142 (271)
T ss_dssp EEEECCTTSCHHH--------HHHHHGGGSGGGC---SCGGGCCEEECSSSSEEEECCCCCTTCSSBCCCHHHHHHHHHH
T ss_pred EEEEecCccchHH--------HHHHhhhhhhccc---cccCcceEEEecCCeEEEecccccCCCCcceecHHHHHHHHHH
Confidence 9999999997411 0111 11110000 01223567888899999999996432 2367999999999
Q ss_pred ccccCCCCCCeEEEEeeccccccCCCCCC-CChhHHHHHHHHHHhC-CCcEEEeccccccccc
Q 040421 241 FPKVNRSETPWLIVLMHCPLYNSYVHHYM-EGEPMRVLYEPWFVEY-KVDVVFAAHVHAYERS 301 (407)
Q Consensus 241 L~~~~~~~~~~~iv~~H~P~~~~~~~~~~-~~~~~~~~l~~l~~~~-~vdlvl~GH~H~y~r~ 301 (407)
|++. +.+++||++|||++........ ....-.++|.++++++ +|+++|+||.|.....
T Consensus 143 L~~~---~~~~~iv~~Hh~p~~~~~~~~d~~~~~~~~~l~~~l~~~~~v~~vl~GH~H~~~~~ 202 (271)
T d3d03a1 143 LFEG---GDKPATIFMHHPPLPLGNAQMDPIACENGHRLLALVERFPSLTRIFCGHNHSLTMT 202 (271)
T ss_dssp HHHH---TTSCEEEEESSCSSCCSCTTTGGGSBTTTHHHHHHHHHCTTEEEEEECSSSSCEEE
T ss_pred Hhhh---ccceeEEEeccCccccCccccccccccchHHHHHHHHhcCCeEEEEeCCcchhhce
Confidence 9874 2346788899998765532211 1112245788899998 6999999999976554
|
| >d2qfra1 b.1.12.1 (A:9-120) Purple acid phosphatase, N-terminal domain {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Kidney bean (Phaseolus vulgaris) [TaxId: 3885]
Probab=99.86 E-value=1e-21 Score=153.37 Aligned_cols=91 Identities=59% Similarity=1.060 Sum_probs=83.0
Q ss_pred CeeeccCCCCCcEEEEEEcCCCCCCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCcCC
Q 040421 1 VHITQGDHEGKGVIVSWVTPDEPGSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGVGN 80 (407)
Q Consensus 1 v~l~~g~~~~~~~~v~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~~~ 80 (407)
|||++|++++++|+|+|.|.+.+..+.|+||++++.+...+.+....+...+....++|+|+|+||+|||.|+|||++++
T Consensus 22 vhlt~~~~~~tsm~VsW~T~~~~~~~~V~yg~~~~~~~~~a~~~~~~~~~~~~~~~~~h~v~Lt~L~P~T~Y~YrVG~~~ 101 (112)
T d2qfra1 22 VHITQGDLVGRAMIISWVTMDEPGSSAVRYWSEKNGRKRIAKGKMSTYRFFNYSSGFIHHTTIRKLKYNTKYYYEVGLRN 101 (112)
T ss_dssp EEEEECSSSSSCEEEEEEESSSCCCCEEEEEESSSCCCEEEECEEECCBCSSCBCCEEEEEEECSCCTTCEEEEEECCSS
T ss_pred EEEeCcCCCCCEEEEEEECCCCCCCcEEEEEECCCCCCcEEEEEEEEEEecccCCcEEEEEEECCCCCCCEEEEEECCCC
Confidence 79999999899999999998777889999999998888888888777766566678999999999999999999999999
Q ss_pred ceeeEEEEcCC
Q 040421 81 ATRQFSFTTPP 91 (407)
Q Consensus 81 ~s~~~~F~T~p 91 (407)
||++++|+|+|
T Consensus 102 ~S~~~~F~T~P 112 (112)
T d2qfra1 102 TTRRFSFITPP 112 (112)
T ss_dssp SCEEEEEECCC
T ss_pred ceeeEEEEcCC
Confidence 99999999987
|
| >d2nxfa1 d.159.1.12 (A:3-322) Uncharacterized C17orf48 homolog zgc:64213 {Zebrafish (Danio rerio) [TaxId: 7955]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: ADPRibase-Mn-like domain: Uncharacterized C17orf48 homolog zgc:64213 species: Zebrafish (Danio rerio) [TaxId: 7955]
Probab=99.84 E-value=5.2e-21 Score=176.80 Aligned_cols=234 Identities=14% Similarity=0.082 Sum_probs=137.3
Q ss_pred CcEEEEEecCCCCCCc----------------hhhH----HHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHH
Q 040421 98 PYTFGLIGDLGQTYYS----------------NRTL----THYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFI 157 (407)
Q Consensus 98 ~~~f~~~gD~~~~~~~----------------~~~l----~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~ 157 (407)
-|||++++|+|.+... ...+ +.+.+. +|||||++||++..... ........+.+++
T Consensus 3 ~f~f~~isD~h~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~~i~~~--~~DfVv~~GDl~~~~~~--~~~~~~~~~~~~~ 78 (320)
T d2nxfa1 3 VFTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRE--RVQCVVQLGDIIDGHNR--RRDASDRALDTVM 78 (320)
T ss_dssp SEEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHHT--TCSEEEECSCCBCTHHH--HTTCHHHHHHHHH
T ss_pred eEEEEEEecCCCCCCCCccccccccchhhHHHHHHHHHHHHHHhhC--CCCEEEECCCCCCCCCc--chhHHHHHHHHHH
Confidence 4999999999975210 1122 233333 89999999999954221 1111222233333
Q ss_pred hhhh-ccCCeEEccCCCccccCCCC---CCc-ccccccccccccCCCCCCCCCCeEEEEecCcEEEEEEecccc------
Q 040421 158 ERNA-AYQPWIWTVGNHEIDFAPQL---GEA-IPFKPFANRFHLPYRAPYSTAPFWYSIRRASAHIIVMSCYSA------ 226 (407)
Q Consensus 158 ~~~~-~~~P~~~~~GNHD~~~~~~~---~~~-~~~~~~~~~f~~P~~~~~~~~~~~ysf~~g~v~fi~Lds~~~------ 226 (407)
+.+. ..+|+++++||||....... ... .....+.. ..............+....++++|+.+|+...
T Consensus 79 ~~~~~~~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (320)
T d2nxfa1 79 AELDACSVDVHHVWGNHEFYNFSRPSLLSSRLNSAQRTGT--DTGSDLIGDDIYAYEFSPAPNFRFVLLDAYDLSVIGRE 156 (320)
T ss_dssp HHHHTTCSEEEECCCHHHHHHCCHHHHHTSTTCCCC--------CEECGGGTCCCEEEEEETTEEEEECCTTSBCSSSSC
T ss_pred HHHHHcCCCEEEecccCccccccchhcccccccchhhhcc--cccccccCCCCccceeecCCCeEEEEecCccccccccc
Confidence 3332 36899999999998421100 000 00000000 00000001122345667789999999987310
Q ss_pred ----------------------------------------CCCChHHHHHHHHhccccCCCCCCeEEEEeeccccccCCC
Q 040421 227 ----------------------------------------FGKYTPQYKWLEKEFPKVNRSETPWLIVLMHCPLYNSYVH 266 (407)
Q Consensus 227 ----------------------------------------~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~ 266 (407)
.....+|++||+++|+++. .+..++||++|+|++.....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~~~-~~~~~viv~~H~p~~~~~~~ 235 (320)
T d2nxfa1 157 EESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSD-HKQERVLIFSHLPVHPCAAD 235 (320)
T ss_dssp TTSHHHHHHHHHHHHHCCCTTCTTSCSCSSSGGGGCSTTCCBCCHHHHHHHHHHHHHHH-HHTCEEEEEESSCCCTTSSC
T ss_pred ccccccccccceeeecccccceecccccccccccccccccccccHHHHHHHHHHHHhhh-hcCCceEEEECCCCccCCCC
Confidence 0124789999999998754 23457999999999765543
Q ss_pred CCCCChhHHHHHHHHHHhC-CCcEEEeccccccccccccccceeeccCCcccccCCCCCceEEEeCCCCCCCCCcccCCC
Q 040421 267 HYMEGEPMRVLYEPWFVEY-KVDVVFAAHVHAYERSERMSNIAYNVTNALCSPVSDQSAPVYITIGDGGNQEGLAKEMTE 345 (407)
Q Consensus 267 ~~~~~~~~~~~l~~l~~~~-~vdlvl~GH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~g~~~iv~G~gG~~~~~~~~~~~ 345 (407)
... .....+++..+|.++ +|+++|+||+|..++.. ..+|+.||+.|+... .
T Consensus 236 ~~~-~~~~~~~~~~~l~~~~~V~~v~~GH~H~~~~~~------------------~~~g~~~i~~~~~~~--~------- 287 (320)
T d2nxfa1 236 PIC-LAWNHEAVLSVLRSHQSVLCFIAGHDHDGGRCT------------------DSSGAQHITLEGVIE--T------- 287 (320)
T ss_dssp GGG-SCTTHHHHHHHHHTCTTEEEEEECSCTTCEEEE------------------CTTSCEEEECCCGGG--C-------
T ss_pred Ccc-chhhHHHHHHHHHhCCCeeEEEeCCcCCcCeee------------------ccCCCEEEECCeeec--C-------
Confidence 211 112346788899998 59999999999877553 236777888764311 1
Q ss_pred CCCCccceeeCcceEEEEEEeeccEEEEEE
Q 040421 346 PQPRYSAYREASFGHGILDVKNRTHAYFGW 375 (407)
Q Consensus 346 ~~p~~~~~~~~~~Gf~~l~v~~~~~~~~~~ 375 (407)
.....+|..++|..+ .+.++-
T Consensus 288 --------~~~~~~~~~~~v~~d-~~~~~~ 308 (320)
T d2nxfa1 288 --------PPHSHAFATAYLYED-RMVMKG 308 (320)
T ss_dssp --------CTTSCEEEEEEECSS-EEEEEE
T ss_pred --------CCCCCCEEEEEEECC-EEEEEE
Confidence 012368999999655 466653
|
| >d1xzwa1 b.1.12.1 (A:1-119) Purple acid phosphatase, N-terminal domain {Sweet potato (Ipomoea batatas) [TaxId: 4120]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Purple acid phosphatase, N-terminal domain family: Purple acid phosphatase, N-terminal domain domain: Purple acid phosphatase, N-terminal domain species: Sweet potato (Ipomoea batatas) [TaxId: 4120]
Probab=99.84 E-value=7.4e-21 Score=150.12 Aligned_cols=91 Identities=65% Similarity=1.203 Sum_probs=81.3
Q ss_pred CeeeccCCCCCcEEEEEEcCC-CCCCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCcC
Q 040421 1 VHITQGDHEGKGVIVSWVTPD-EPGSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGVG 79 (407)
Q Consensus 1 v~l~~g~~~~~~~~v~W~t~~-~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~~ 79 (407)
|||+++++++++|+|+|.|.. .++.+.|+||++++.+...+.+.+..+...+...+++|+|+|+||+|||.|+|||+++
T Consensus 28 vhl~~~~~~~tsm~VsW~T~~~~~~~~~V~yG~~~~~~~~~a~g~s~~~~~~~~~~~~~H~v~LtgL~P~T~Y~YrVG~~ 107 (119)
T d1xzwa1 28 VHITQGDYEGRGVIISWTTPYDKAGANKVFYWSENSKSQKRAMGTVVTYKYYNYTSAFIHHCTIKDLEYDTKYYYRLGFG 107 (119)
T ss_dssp EEEEECSSSSSCEEEEEEESSCCTTTTEEEEEETTCCCCEEEECEEECCEETTEECCEEEEEEECCCCTTCEEEEEECCG
T ss_pred EEEEecCCCCCEEEEEEECCCCCCCCCEEEEcCCCCCCccEEEEEEEEeecccccCCeEEEEEECCCCCCCEEEEEECCC
Confidence 699999998999999999953 3456799999999888888888887776666677899999999999999999999998
Q ss_pred CceeeEEEEcCC
Q 040421 80 NATRQFSFTTPP 91 (407)
Q Consensus 80 ~~s~~~~F~T~p 91 (407)
++|++++|+|+|
T Consensus 108 ~~S~~~~F~T~P 119 (119)
T d1xzwa1 108 DAKRQFWFVTPP 119 (119)
T ss_dssp GGCEEEEEECCC
T ss_pred CccceEEEeCCC
Confidence 999999999987
|
| >d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Hypothetical protein TT1561 species: Thermus thermophilus [TaxId: 274]
Probab=99.64 E-value=3.7e-16 Score=137.39 Aligned_cols=178 Identities=9% Similarity=-0.014 Sum_probs=107.0
Q ss_pred CcEEEEEecCCCCCCchhhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccCCeEEccCCCcccc
Q 040421 98 PYTFGLIGDLGQTYYSNRTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHEIDF 177 (407)
Q Consensus 98 ~~~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~~ 177 (407)
.-+|+++||+|......+.+-+.+.+ .++|+|+++||++.... ....+..+.+.++.+ ..|+++++||||...
T Consensus 5 ~~~i~~~sd~hg~~eale~~~~~~~~-~~~D~vv~~GDl~~~~~----~~~~~~~~~~~L~~~--~~pv~~i~GNHD~~~ 77 (228)
T d1uf3a_ 5 VRYILATSNPMGDLEALEKFVKLAPD-TGADAIALIGNLMPKAA----KSRDYAAFFRILSEA--HLPTAYVPGPQDAPI 77 (228)
T ss_dssp CCEEEEEECCTTCHHHHHHHHTHHHH-HTCSEEEEESCSSCTTC----CHHHHHHHHHHHGGG--CSCEEEECCTTSCSH
T ss_pred ccEEEEEeCCCCCHHHHHHHHHHHhh-cCCCEEEECCCCCCCCc----cchHHHHhhhhhccc--cceEEEEecCCCchh
Confidence 45788999999765433333333333 38999999999985422 223444455554443 579999999999731
Q ss_pred CCCCCCcccccccccccccCCCCCCCCCCeEEEEecCcEEEEEEeccccC----------CCChHHHHHHHHhccccCCC
Q 040421 178 APQLGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRRASAHIIVMSCYSAF----------GKYTPQYKWLEKEFPKVNRS 247 (407)
Q Consensus 178 ~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ysf~~g~v~fi~Lds~~~~----------~~~~~Q~~WL~~~L~~~~~~ 247 (407)
.... ...+......+.. ......+.+..+++.++.++..... .....|..||++.++..
T Consensus 78 ~~~~-----~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--- 146 (228)
T d1uf3a_ 78 WEYL-----REAANVELVHPEM---RNVHETFTFWRGPYLVAGVGGEIADEGEPEEHEALRYPAWVAEYRLKALWEL--- 146 (228)
T ss_dssp HHHH-----HHHHHHHHHCTTE---EECBTSEEEETTTEEEEEECSEEESSSCCBSSSSCEEEHHHHHHHHGGGGGS---
T ss_pred hhhh-----hhhcccccccccc---cccceeeeeccCCEEEEecCCccccCcCcchhhhhhhhHHHHHHHHHHHhhc---
Confidence 1000 0000000000000 0001124566788888888763211 12367899999998873
Q ss_pred CCCeEEEEeeccccccCCCCCCCChhHHHHHHHHHHhCCCcEEEecccccc
Q 040421 248 ETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAY 298 (407)
Q Consensus 248 ~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y 298 (407)
...+.|+++|+|++....... . ...+..++++++++++++||+|..
T Consensus 147 ~~~~~il~~H~p~~~~~~~~~-~----~~~~~~~~~~~~~~lvl~GH~H~~ 192 (228)
T d1uf3a_ 147 KDYPKIFLFHTMPYHKGLNEQ-G----SHEVAHLIKTHNPLLVLVAGKGQK 192 (228)
T ss_dssp CSCCEEEEESSCBCBTTTBTT-S----BHHHHHHHHHHCCSEEEECCSSCE
T ss_pred cCCceEEEEeeeccCcccccc-c----cHHHHHHHHhcCCcEEEEcccccc
Confidence 334578999999876543221 1 135667788999999999999964
|
| >d2yvta1 d.159.1.6 (A:4-260) Uncharacterized protein Aq_1956 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TT1561-like domain: Uncharacterized protein Aq 1956 species: Aquifex aeolicus [TaxId: 63363]
Probab=99.59 E-value=3.2e-15 Score=133.59 Aligned_cols=185 Identities=10% Similarity=0.060 Sum_probs=103.3
Q ss_pred CcEEEEEecCCCCCCchhhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhh-----------------------HHH
Q 040421 98 PYTFGLIGDLGQTYYSNRTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWD-----------------------TWG 154 (407)
Q Consensus 98 ~~~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~-----------------------~~~ 154 (407)
+.||++++|.|......+.+...+.+ .+||+||++||+++.... ...|. .+.
T Consensus 2 ~~ri~~isD~h~~~~~l~~l~~~~~~-~~~D~vli~GDl~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~n~d~~~~~ 76 (257)
T d2yvta1 2 PRKVLAIKNFKERFDLLPKLKGVIAE-KQPDILVVVGNILKNEAL----EKEYERAHLARREPNRKVIHENEHYIIETLD 76 (257)
T ss_dssp CCEEEEEECCTTCGGGHHHHHHHHHH-HCCSEEEEESCCCCCHHH----HHHHHHHHHTTCCCCTHHHHHHHHHHHHHHH
T ss_pred CcEEEEEeCCCCCHHHHHHHHHHHhh-cCCCEEEEecccCCCCCC----CHHHHHHHHhhhhhceeeeccccccchhhHH
Confidence 57999999999766554444444443 389999999999953210 01111 112
Q ss_pred HHHhhhh-ccCCeEEccCCCccccCCCCCCcccccccccccccCCCCCCCCCCeEEEEecCcEEEEEEeccccCC-----
Q 040421 155 RFIERNA-AYQPWIWTVGNHEIDFAPQLGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRRASAHIIVMSCYSAFG----- 228 (407)
Q Consensus 155 ~~~~~~~-~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ysf~~g~v~fi~Lds~~~~~----- 228 (407)
..++.+. ..+|+++++||||...... ....+......+.. ......+.+..+++.|+.+++.....
T Consensus 77 ~~~~~L~~~~~pv~~i~GNHD~~~~~~-----~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (257)
T d2yvta1 77 KFFREIGELGVKTFVVPGKNDAPLKIF-----LRAAYEAETAYPNI---RVLHEGFAGWRGEFEVIGFGGLLTEHEFEED 148 (257)
T ss_dssp HHHHHHHTTCSEEEEECCTTSCCHHHH-----HHHHHHTTTTCTTE---EECSSEEEEETTTEEEEEECSEEESSCCBSS
T ss_pred HHHHHHHhcCCcEEEEeCCCcchhhHH-----HHHhcccccccccc---ccccceeEEecCCeEEEEeccccCCccccch
Confidence 2233332 3589999999999631000 00001000000000 00112334455778888876532111
Q ss_pred ----CChHHHHHHHHhccccCCCCCCeEEEEeeccccccCCCCCC--CChhHHHHHHHHHHhCCCcEEEecccccc
Q 040421 229 ----KYTPQYKWLEKEFPKVNRSETPWLIVLMHCPLYNSYVHHYM--EGEPMRVLYEPWFVEYKVDVVFAAHVHAY 298 (407)
Q Consensus 229 ----~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~--~~~~~~~~l~~l~~~~~vdlvl~GH~H~y 298 (407)
....+..|++..++. .+....|+++|+|++........ ........+..++++++++++++||.|..
T Consensus 149 ~~~~~~~~~~~~~~~~~~~---~~~~~~Il~~H~pp~~~~~~~~~~~~~~~g~~~l~~~l~~~~~~~~~~GHiH~~ 221 (257)
T d2yvta1 149 FVLKYPRWYVEYILKFVNE---LKPRRLVTIFYTPPIGEFVDRTPEDPKHHGSAVVNTIIKSLNPEVAIVGHVGKG 221 (257)
T ss_dssp SSCEEEHHHHHHHGGGGGG---SCCCEEEEEESSCCSCSSTTCBTTBSCCCSCHHHHHHHHHHCCSEEEECSSCCE
T ss_pred hhhhhhhhHHHHHHHHhhh---cccccEEEEEccccccccccccccchhhhhhHHHHHhhhhcCCcEEEEEeecCC
Confidence 113344555555554 34457899999999764432111 11112356788899999999999999964
|
| >d1z2wa1 d.159.1.7 (A:1-182) Vacuolar protein sorting 29, VPS29 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Vacuolar protein sorting 29, VPS29 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.36 E-value=4.6e-11 Score=100.82 Aligned_cols=178 Identities=15% Similarity=0.144 Sum_probs=107.5
Q ss_pred cEEEEEecCCCCCCch---hhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccCCeEEccCCCcc
Q 040421 99 YTFGLIGDLGQTYYSN---RTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHEI 175 (407)
Q Consensus 99 ~~f~~~gD~~~~~~~~---~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~ 175 (407)
+|++++||+|...... ..+.++.+. .++|.|+++||++. .+-.+.++.+. .|+++|.||||.
T Consensus 1 MkI~viSD~H~~~~~~~l~~~~~~~~~~-~~~D~Ii~~GDi~~------------~e~l~~l~~~~--~~v~~V~GN~D~ 65 (182)
T d1z2wa1 1 MLVLVLGDLHIPHRCNSLPAKFKKLLVP-GKIQHILCTGNLCT------------KESYDYLKTLA--GDVHIVRGDFDE 65 (182)
T ss_dssp CEEEEECCCCBTTTCSSCCHHHHTTCCT-TSCSEEEECSCCBS------------HHHHHHHHHHC--SEEEECCCTTCC
T ss_pred CEEEEEeecCCCCcchhhHHHHHHHhcc-cCCCEEEEccCccc------------hhhHHHHHhhC--CceEEEeCCcCc
Confidence 5899999999764322 344444444 37999999999972 12233444432 378999999997
Q ss_pred ccCCCCCCcccccccccccccCCCCCCCCCCeEEEEecCcEEEEEEeccccCCCChHHHHHHHHhccccCCCCCCeEEEE
Q 040421 176 DFAPQLGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRRASAHIIVMSCYSAFGKYTPQYKWLEKEFPKVNRSETPWLIVL 255 (407)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ysf~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~ 255 (407)
.. .+|. .-.+.+++ ++|.+
T Consensus 66 ~~-----------------~~p~---------~~~~~~~g-----------------------------------~~i~~ 84 (182)
T d1z2wa1 66 NL-----------------NYPE---------QKVVTVGQ-----------------------------------FKIGL 84 (182)
T ss_dssp CT-----------------TSCS---------EEEEEETT-----------------------------------EEEEE
T ss_pred cc-----------------ccce---------EEEEEEcC-----------------------------------cEEEE
Confidence 31 0111 01111111 35666
Q ss_pred eeccccccCCCCCCCChhHHHHHHHHHHhCCCcEEEeccccccccccccccceeeccCCcccccCCCCCceEEEeCCCCC
Q 040421 256 MHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAYERSERMSNIAYNVTNALCSPVSDQSAPVYITIGDGGN 335 (407)
Q Consensus 256 ~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~g~~~iv~G~gG~ 335 (407)
+|.+.+.... ..+.+..++++.+.|++|+||+|...-.. -+++.+|-.|+.|.
T Consensus 85 ~Hg~~~~~~~--------~~~~l~~~~~~~~~divi~GHTH~p~~~~-------------------~~~~~~iNPGSv~~ 137 (182)
T d1z2wa1 85 IHGHQVIPWG--------DMASLALLQRQFDVDILISGHTHKFEAFE-------------------HENKFYINPGSATG 137 (182)
T ss_dssp ECSCCCCBTT--------CHHHHHHHHHHHSSSEEECCSSCCCEEEE-------------------ETTEEEEECCCTTC
T ss_pred EeCCCCCCCC--------CHHHHHHHHhccCCCEEEECCcCcceEEE-------------------ECCEEEEeCCCCCC
Confidence 7765443221 12355667778899999999999753321 14566777787765
Q ss_pred CCCCcccCCCCCCCccceeeCcceEEEEEEeeccEEEEEEEEcCCCceeeeeeEEEEe
Q 040421 336 QEGLAKEMTEPQPRYSAYREASFGHGILDVKNRTHAYFGWHRNQDDYAVEADSVWLHN 393 (407)
Q Consensus 336 ~~~~~~~~~~~~p~~~~~~~~~~Gf~~l~v~~~~~~~~~~~~~~~g~~~~~D~~~i~~ 393 (407)
+... ... .....|+++++. +..+++..+.-.++++ ..++++..|
T Consensus 138 pr~~--~~~----------~~~~syaild~~-~~~v~~~~~~l~~~~v-~~~~~~~~~ 181 (182)
T d1z2wa1 138 AYNA--LET----------NIIPSFVLMDIQ-ASTVVTYVYQLIGDDV-KVERIEYKK 181 (182)
T ss_dssp CCCS--SCS----------CCCCEEEEEEEE-TTEEEEEEEEEETTEE-EEEEEEEEC
T ss_pred CCCC--CCC----------CCCCEEEEEEEe-CCEEEEEEEEecCCcE-EEEEEEEEc
Confidence 4321 000 112469999995 4557776665455665 478888876
|
| >d2a22a1 d.159.1.7 (A:4-196) Vacuolar protein sorting 29, VPS29 {Cryptosporidium parvum [TaxId: 5807]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Vacuolar protein sorting 29, VPS29 species: Cryptosporidium parvum [TaxId: 5807]
Probab=99.34 E-value=9.6e-11 Score=99.94 Aligned_cols=185 Identities=14% Similarity=0.159 Sum_probs=106.8
Q ss_pred EEEEecCCCCCCc---hhhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccCCeEEccCCCcccc
Q 040421 101 FGLIGDLGQTYYS---NRTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHEIDF 177 (407)
Q Consensus 101 f~~~gD~~~~~~~---~~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~~ 177 (407)
|+++||+|..... ...+.++.+. .++|.||++||++. . ...+.++.+. .|+++|+||||...
T Consensus 6 IlviSD~H~~~~~~~l~~~~~~~~~~-~~vD~ii~~GDi~~--------~----~~l~~l~~l~--~~v~~V~GN~D~~~ 70 (193)
T d2a22a1 6 VLLIGDLKIPYGAKELPSNFRELLAT-DKINYVLCTGNVCS--------Q----EYVEMLKNIT--KNVYIVSGDLDSAI 70 (193)
T ss_dssp EEEECCCCTTTTCSSCCGGGHHHHHC-TTCCEEEECSCCCC--------H----HHHHHHHHHC--SCEEECCCTTCCSC
T ss_pred EEEEeCCCCCcccchhhHHHHHHhcc-CCCCEEEECCCCCC--------H----HHHHHHHhhC--CCEEEEcCCCCcch
Confidence 7899999975432 2345555555 38999999999972 1 1233344332 37889999999742
Q ss_pred CCCCCCcccccccccccccCCCCCCCCCCeEEEEecCcEEEEEEeccccCCCChHHHHHHHHhccccCCCCCCeEEEEee
Q 040421 178 APQLGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRRASAHIIVMSCYSAFGKYTPQYKWLEKEFPKVNRSETPWLIVLMH 257 (407)
Q Consensus 178 ~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ysf~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H 257 (407)
... . ..+.. .+| ..-.+.+++ ++|.+.|
T Consensus 71 ~~~---~---~~~~~--~lp---------~~~~~~~~~-----------------------------------~~i~l~H 98 (193)
T d2a22a1 71 FNP---D---PESNG--VFP---------EYVVVQIGE-----------------------------------FKIGLMH 98 (193)
T ss_dssp CBC---C---GGGTB--CCC---------SEEEEEETT-----------------------------------EEEEEEC
T ss_pred hhh---h---HHHHh--hCC---------ccEEEEECC-----------------------------------EEEEEEe
Confidence 110 0 01111 112 112222232 4455666
Q ss_pred ccccccCCCCCCCChhHHHHHHHHHHhCCCcEEEeccccccccccccccceeeccCCcccccCCCCCceEEEeCCCCCCC
Q 040421 258 CPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAYERSERMSNIAYNVTNALCSPVSDQSAPVYITIGDGGNQE 337 (407)
Q Consensus 258 ~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~g~~~iv~G~gG~~~ 337 (407)
...+.... -.+.+..++.+.++|++++||+|...... -+++++|-.|+.|.+.
T Consensus 99 ~~~~~~~~--------~~~~l~~~~~~~~~dvvi~GHTH~~~~~~-------------------~~g~~~iNPGSvg~pr 151 (193)
T d2a22a1 99 GNQVLPWD--------DPGSLEQWQRRLDCDILVTGHTHKLRVFE-------------------KNGKLFLNPGTATGAF 151 (193)
T ss_dssp STTSSSTT--------CHHHHHHHHHHHTCSEEEECSSCCCEEEE-------------------ETTEEEEECCCSSCCC
T ss_pred ccCCCCCC--------CHHHHHHHHhhcCCCEEEEcCccCceEEE-------------------ECCEEEEECCCCCcCc
Confidence 44322111 12356677888899999999999854332 1455666678776543
Q ss_pred CCcccCCCCCCCccceeeCcceEEEEEEeeccEEEEEEEEcCCCceeeeeeEEEEe
Q 040421 338 GLAKEMTEPQPRYSAYREASFGHGILDVKNRTHAYFGWHRNQDDYAVEADSVWLHN 393 (407)
Q Consensus 338 ~~~~~~~~~~p~~~~~~~~~~Gf~~l~v~~~~~~~~~~~~~~~g~~~~~D~~~i~~ 393 (407)
.. . .+ .....|+.+++. +..++++++.-.+|++ ..+..++.|
T Consensus 152 ~~--~----~~------~~~~syaild~~-~~~v~v~~y~l~~~~~-~~~~~~~~~ 193 (193)
T d2a22a1 152 SA--L----TP------DAPPSFMLMALQ-GNKVVLYVYDLRDGKT-NVAMSEFSK 193 (193)
T ss_dssp CT--T----ST------TCCCEEEEEEEE-TTEEEEEEEEEETTEE-EEEEEEEEC
T ss_pred CC--C----CC------CCCCEEEEEEEE-CCEEEEEEEEecCCeE-EEEEEEEeC
Confidence 21 0 10 113579999995 4568888776666765 356655544
|
| >d3ck2a1 d.159.1.7 (A:1-173) Uncharacterized protein SP1879 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Uncharacterized protein SP1879 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.16 E-value=1.3e-09 Score=90.96 Aligned_cols=161 Identities=13% Similarity=0.092 Sum_probs=99.1
Q ss_pred CcEEEEEecCCCCCCchhhHHHhhhC-CCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccCCeEEccCCCccc
Q 040421 98 PYTFGLIGDLGQTYYSNRTLTHYELN-PIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHEID 176 (407)
Q Consensus 98 ~~~f~~~gD~~~~~~~~~~l~~~~~~-~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~ 176 (407)
..||+++||+|... .+++++.+. ..++|.|+++||+++.... . ...|+.+|.||||+.
T Consensus 3 ~~kI~viSD~Hgn~---~al~~vl~~~~~~~D~iih~GD~~~~~~~-----~-------------~~~~~~~V~GN~D~~ 61 (173)
T d3ck2a1 3 KQTIIVMSDSHGDS---LIVEEVRDRYVGKVDAVFHNGDSELRPDS-----P-------------LWEGIRVVKGNMDFY 61 (173)
T ss_dssp CEEEEEECCCTTCH---HHHHHHHHHHTTTSSEEEECSCCCSCTTC-----G-------------GGTTEEECCCTTCCS
T ss_pred CCEEEEEeccCCCH---HHHHHHHHHhhcCCCEEEECCcccCcccc-----h-------------hhcCCeEEecCcccc
Confidence 57999999999653 333333221 1378999999998854210 1 113788999999973
Q ss_pred cCCCCCCcccccccccccccCCCCCCCCCCeEEEEecCcEEEEEEeccccCCCChHHHHHHHHhccccCCCCCCeEEEEe
Q 040421 177 FAPQLGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRRASAHIIVMSCYSAFGKYTPQYKWLEKEFPKVNRSETPWLIVLM 256 (407)
Q Consensus 177 ~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ysf~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~ 256 (407)
.. +| ....+.+++ ..|.+.
T Consensus 62 ~~-----------------~~---------~~~~~~~~~-----------------------------------~~~~~~ 80 (173)
T d3ck2a1 62 AG-----------------YP---------ERLVTELGS-----------------------------------TKIIQT 80 (173)
T ss_dssp TT-----------------CC---------SEEEEEETT-----------------------------------EEEEEE
T ss_pred cc-----------------cc---------eEEEEEECC-----------------------------------EEEEEE
Confidence 10 11 011122222 456666
Q ss_pred eccccccCCCCCCCChhHHHHHHHHHHhCCCcEEEeccccccccccccccceeeccCCcccccCCCCCceEEEeCCCCCC
Q 040421 257 HCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAYERSERMSNIAYNVTNALCSPVSDQSAPVYITIGDGGNQ 336 (407)
Q Consensus 257 H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~g~~~iv~G~gG~~ 336 (407)
|..++..... . +.+..++.+.++|++|+||+|...... .+++.+|-.|+-|.+
T Consensus 81 Hg~~~~~~~~----~----~~l~~~~~~~~~dvvi~GHTH~p~~~~-------------------~~~~~~iNPGSvg~p 133 (173)
T d3ck2a1 81 HGHLFDINFN----F----QKLDYWAQEEEAAICLYGHLHVPSAWL-------------------EGKILFLNPGSISQP 133 (173)
T ss_dssp CSGGGTTTTC----S----HHHHHHHHHTTCSEEECCSSCCEEEEE-------------------ETTEEEEEECCSSSC
T ss_pred eCcCCCCCCC----H----HHHHHHHHhcCCCEEEeCCcCcceEEE-------------------ECCEEEEECCCCCCC
Confidence 7555443211 1 245667778899999999999754332 156678888888765
Q ss_pred CCCcccCCCCCCCccceeeCcceEEEEEEeeccEEEEEEEEcCCCcee
Q 040421 337 EGLAKEMTEPQPRYSAYREASFGHGILDVKNRTHAYFGWHRNQDDYAV 384 (407)
Q Consensus 337 ~~~~~~~~~~~p~~~~~~~~~~Gf~~l~v~~~~~~~~~~~~~~~g~~~ 384 (407)
... . ....|+.+++.+ ..+.++|+. .|++++
T Consensus 134 r~~-------~--------~~~syail~~~~-~~~~v~~~~-~d~~~~ 164 (173)
T d3ck2a1 134 RGT-------I--------RECLYARVEIDD-SYFKVDFLT-RDHEVY 164 (173)
T ss_dssp CTT-------C--------CSCCEEEEEECS-SEEEEEEEC-TTSCBC
T ss_pred CCC-------C--------CCCEEEEEEEeC-CEEEEEEEE-eCCeEe
Confidence 320 1 124589999954 568899874 677754
|
| >d1nnwa_ d.159.1.5 (A:) Hypothetical protein PF1291 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Phosphoesterase-related domain: Hypothetical protein PF1291 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=99.14 E-value=2.2e-11 Score=107.92 Aligned_cols=71 Identities=7% Similarity=-0.050 Sum_probs=46.0
Q ss_pred cEEEEEecCCCCCCch-hhHHHhh---hCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccCCeEEccCCCc
Q 040421 99 YTFGLIGDLGQTYYSN-RTLTHYE---LNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHE 174 (407)
Q Consensus 99 ~~f~~~gD~~~~~~~~-~~l~~~~---~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD 174 (407)
++|+++||+|...... ..++.+. ....++|.+|++||++.... .-.+..+.+..+....++++++||||
T Consensus 1 v~I~visDiHg~~~~l~~~l~~i~~~~~~~~~~D~ii~~GDlvd~G~-------~~~evi~~l~~l~~~~~v~~v~GNHD 73 (251)
T d1nnwa_ 1 VYVAVLANIAGNLPALTAALSRIEEMREEGYEIEKYYILGNIVGLFP-------YPKEVIEVIKDLTKKENVKIIRGKYD 73 (251)
T ss_dssp CEEEEEECCTTCHHHHHHHHHHHHHHHHTTCCEEEEEEESCSSSSSS-------CHHHHHHHHHHHHHHSCEEEECCHHH
T ss_pred CEEEEEEccccCHHHHHHHHHHHHHhhccCCCCcEEEEecCcCCCCC-------CcHHHHHHHHHHhhcCCEEEEeccHH
Confidence 4899999999654332 2233332 12136799999999995421 12344555555555668999999999
Q ss_pred cc
Q 040421 175 ID 176 (407)
Q Consensus 175 ~~ 176 (407)
..
T Consensus 74 ~~ 75 (251)
T d1nnwa_ 74 QI 75 (251)
T ss_dssp HH
T ss_pred HH
Confidence 64
|
| >d1ii7a_ d.159.1.4 (A:) Mre11 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DNA double-strand break repair nuclease domain: Mre11 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=99.08 E-value=2.1e-10 Score=105.60 Aligned_cols=74 Identities=15% Similarity=0.169 Sum_probs=48.9
Q ss_pred cEEEEEecCCCCCCc----------hhhHHHhh---hCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhh-ccC
Q 040421 99 YTFGLIGDLGQTYYS----------NRTLTHYE---LNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNA-AYQ 164 (407)
Q Consensus 99 ~~f~~~gD~~~~~~~----------~~~l~~~~---~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~-~~~ 164 (407)
+||+.++|+|.+... ...+++++ .+ .++|+||++||++.... ........+.+.++.+. ..+
T Consensus 1 Mkilh~SDlHlG~~~~~~~~~~~~~~~~l~~iv~~a~~-~~~D~vli~GDlfd~~~---~~~~~~~~~~~~~~~l~~~~i 76 (333)
T d1ii7a_ 1 MKFAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQ-ENVDFILIAGDLFHSSR---PSPGTLKKAIALLQIPKEHSI 76 (333)
T ss_dssp CEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHH-TTCSEEEEESCSBSSSS---CCHHHHHHHHHHHHHHHTTTC
T ss_pred CEEEEEecCcCCCCCcCchhHHHHHHHHHHHHHHHHHH-cCCCEEEECCCCCCCCC---CCHHHHHHHHHHHhhHHhcCC
Confidence 689999999986432 12233322 22 38999999999986421 12233344556666554 358
Q ss_pred CeEEccCCCccc
Q 040421 165 PWIWTVGNHEID 176 (407)
Q Consensus 165 P~~~~~GNHD~~ 176 (407)
|++.++||||..
T Consensus 77 ~v~~i~GNHD~~ 88 (333)
T d1ii7a_ 77 PVFAIEGNHDRT 88 (333)
T ss_dssp CEEEECCTTTCC
T ss_pred cEEEeCCCCccc
Confidence 999999999974
|
| >d1s3la_ d.159.1.7 (A:) Putative phosphodiesterase MJ0936 {Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Putative phosphodiesterase MJ0936 species: Methanococcus jannaschii [TaxId: 2190]
Probab=98.94 E-value=2.4e-09 Score=88.71 Aligned_cols=62 Identities=18% Similarity=0.217 Sum_probs=41.5
Q ss_pred cEEEEEecCCCCCCch-hhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccCCeEEccCCCccc
Q 040421 99 YTFGLIGDLGQTYYSN-RTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHEID 176 (407)
Q Consensus 99 ~~f~~~gD~~~~~~~~-~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~ 176 (407)
+|++++||+|...... +.++.+.+. ++|.|+++||++.. ... +.+.. ...|++.+.||||..
T Consensus 1 MkI~iiSDiHgn~~al~~vl~~~~~~--~~D~ii~~GD~~~~--------~~~----~~l~~--~~~~~~~v~GN~D~~ 63 (165)
T d1s3la_ 1 MKIGIMSDTHDHLPNIRKAIEIFNDE--NVETVIHCGDFVSL--------FVI----KEFEN--LNANIIATYGNNDGE 63 (165)
T ss_dssp CEEEEECCCTTCHHHHHHHHHHHHHS--CCSEEEECSCCCST--------HHH----HHGGG--CSSEEEEECCTTCCC
T ss_pred CEEEEEEeCCCCHHHHHHHHHHHHhc--CCCEEEECCCccCH--------HHH----HHHhh--cCccEEEEccccccc
Confidence 6899999999754332 233434444 89999999999831 111 12222 246899999999974
|
| >d1su1a_ d.159.1.7 (A:) Phosphodiesterase yfcE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: YfcE-like domain: Phosphodiesterase yfcE species: Escherichia coli [TaxId: 562]
Probab=98.63 E-value=1.5e-07 Score=78.82 Aligned_cols=74 Identities=11% Similarity=0.053 Sum_probs=43.7
Q ss_pred cEEEEEecCCCCCCchh-hHHHhhhCCCCCceEEEcCCccccCCCCCCCc-hhhhHHHHHHhhhhccCCeEEccCCCccc
Q 040421 99 YTFGLIGDLGQTYYSNR-TLTHYELNPIKGQTVLFVGDLSYADDYPFHDN-NRWDTWGRFIERNAAYQPWIWTVGNHEID 176 (407)
Q Consensus 99 ~~f~~~gD~~~~~~~~~-~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~-~~~~~~~~~~~~~~~~~P~~~~~GNHD~~ 176 (407)
+||+++||+|......+ .++.+.+. ++|.+|++||++.......... .......+.+..+ ..|++.+.||||..
T Consensus 2 Mki~iiSDiHg~~~al~~vl~~~~~~--~~D~iv~~GDiv~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~GNhD~~ 77 (184)
T d1su1a_ 2 MKLMFASDIHGSLPATERVLELFAQS--GAQWLVILGDVLNHGPRNALPEGYAPAKVVERLNEV--AHKVIAVRGNCDSE 77 (184)
T ss_dssp CEEEEECCCTTBHHHHHHHHHHHHHH--TCSEEEECSCCSCCCTTSCCCTTBCHHHHHHHHHTT--GGGEEECCCTTCCH
T ss_pred cEEEEEeecCCCHHHHHHHHHHHhhc--CCCEEEEcCcccccCccchhhhccCcHHHHHHHHhc--CCcEEEecCCCCch
Confidence 69999999995433222 23333333 8999999999985422111111 1112223333332 35899999999974
|
| >d1usha2 d.159.1.2 (A:26-362) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=98.61 E-value=2.6e-07 Score=85.11 Aligned_cols=188 Identities=14% Similarity=0.117 Sum_probs=90.2
Q ss_pred CcEEEEEecCCCCCCc-------h----hhHHHhhhC--CCCCc-eEEEcCCccccCCCCCCCchhhhHHHHHHhhhhcc
Q 040421 98 PYTFGLIGDLGQTYYS-------N----RTLTHYELN--PIKGQ-TVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAY 163 (407)
Q Consensus 98 ~~~f~~~gD~~~~~~~-------~----~~l~~~~~~--~~~~d-~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (407)
.++|+.++|+|..... . ..++++.++ ..+++ ++|.+||++...... .........+.|..+.
T Consensus 8 ~ltILhtnD~Hg~l~~~~~~~~g~a~~~~~i~~~r~~~~~~~~~~l~ldaGD~~~gs~~s--~~~~g~~~~~~mn~~g-- 83 (337)
T d1usha2 8 KITVLHTNDHHGHFWRNEYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPES--DLQDAEPDFRGMNLVG-- 83 (337)
T ss_dssp EEEEEEECCCTTCCSCCTTSCCCHHHHHHHHHHHHHHHHHTTCEEEEEECSCCSSSCHHH--HTTTTHHHHHHHHHHT--
T ss_pred EEEEEEEeecccCCcCCCCCCcCHHHHHHHHHHHHHHHHhcCCCEEEEECCCCcccCHHH--HHhCChHHHHHHHhcC--
Confidence 5889999999964211 1 113333221 01444 667799998532210 0111222334444332
Q ss_pred CCeEEccCCCccccCCCCCCcccccccccccccCCCC-------C-CCCCCeEEEEecCcEE--EEEEecccc-------
Q 040421 164 QPWIWTVGNHEIDFAPQLGEAIPFKPFANRFHLPYRA-------P-YSTAPFWYSIRRASAH--IIVMSCYSA------- 226 (407)
Q Consensus 164 ~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~-------~-~~~~~~~ysf~~g~v~--fi~Lds~~~------- 226 (407)
.=..++||||+.+... .+..+......|.-. . ...-..|.-++.++++ ||.+-+...
T Consensus 84 -~Da~~~GNHEfd~G~~-----~l~~~~~~~~~p~l~aN~~~~~~~~~~~~py~I~~~~g~kVgviG~~~~~~~~~~~~~ 157 (337)
T d1usha2 84 -YDAMAIGNHEFDNPLT-----VLRQQEKWAKFPLLSANIYQKSTGERLFKPWALFKRQDLKIAVIGLTTDDTAKIGNPE 157 (337)
T ss_dssp -CCEEECCGGGGSSCHH-----HHHHHHHHCSSCEECSSEEETTTTEESSBSEEEEEETTEEEEEEEEECTTTTTSSSCC
T ss_pred -CeEEEechhhhccchH-----HHHHHHHhcCceEeeccccccccccccccceeeeecCCeEEEeecccccccccccCcc
Confidence 2256799999964210 011111111111100 0 0012345556778754 566644211
Q ss_pred C------CCChHHHHHHHHhccccCCCCCCeEEEEeeccccccCCCCCCCChhHHHHHHHHHHhCCCcEEEeccccccc
Q 040421 227 F------GKYTPQYKWLEKEFPKVNRSETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAYE 299 (407)
Q Consensus 227 ~------~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~ 299 (407)
. ....+..+...++|+++ .++..+|+++|.+........ ........+...+...+||++|.||.|...
T Consensus 158 ~~~~~~~~d~~~~~~~~~~~l~~~--~~~D~iI~lsH~G~~~d~~~~--~~~~~~~~la~~~~~~~vD~IvgGHsH~~~ 232 (337)
T d1usha2 158 YFTDIEFRKPADEAKLVIQELQQT--EKPDIIIAATHMGHYDNGEHG--SNAPGDVEMARALPAGSLAMIVGGHSQDPV 232 (337)
T ss_dssp CCTTEEECCHHHHHHHHHHHHHHH--TCCSEEEEEEESCCCGGGCCT--TSCCCHHHHHHHSCTTSSSEEECCSSCCBC
T ss_pred cccCcccccHHHHHHHHHHHHhhc--cCCCEEEEecccCcccccccc--cccchhHHHHHhCcccCceEEecCccCccc
Confidence 0 01112333333445432 356789999999875543211 111111234444455689999999999753
|
| >d1xm7a_ d.159.1.8 (A:) Hypothetical protein aq_1666 {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Hypothetical protein aq 1666 domain: Hypothetical protein aq 1666 species: Aquifex aeolicus [TaxId: 63363]
Probab=98.59 E-value=2.7e-07 Score=77.54 Aligned_cols=135 Identities=18% Similarity=0.161 Sum_probs=78.5
Q ss_pred EEEEecCCCCCCc--------------hhhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccCCe
Q 040421 101 FGLIGDLGQTYYS--------------NRTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPW 166 (407)
Q Consensus 101 f~~~gD~~~~~~~--------------~~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 166 (407)
+.++||+|.+... ...++.+.+...+.|.|+++||+++..+. .+++.+.++.+.. ..
T Consensus 4 i~fiSD~Hfgh~~i~~~r~f~~~~~~~~~ii~~wn~~V~~~D~v~~LGD~~~~~~~-------~~~~~~~l~~L~g--~~ 74 (188)
T d1xm7a_ 4 MYFISDTHFYHENIINLNPEVRFKGFEIVILTNLLKVLKPEDTLYHLGDFTWHFND-------KNEYLRIWKALPG--RK 74 (188)
T ss_dssp EEEEBCCCBTCTTHHHHSTTTCCTTHHHHHHHHHHTTCCTTCEEEECSCCBSCSCC-------TTSHHHHHHHSSS--EE
T ss_pred EEEEeCcCCCCcchhhcCCCCCHHHHHHHHHHHHHhhcCCCCEEEEeCCccccCCC-------HHHHHHHHHHCCC--ce
Confidence 4569999976422 12234444443467999999999875321 1234455665543 56
Q ss_pred EEccCCCccccCCCCCCcccccccccccccCCCCCCCCCCeEEEEecCcEEEEEEeccccCCCChHHHHHHHHhccccCC
Q 040421 167 IWTVGNHEIDFAPQLGEAIPFKPFANRFHLPYRAPYSTAPFWYSIRRASAHIIVMSCYSAFGKYTPQYKWLEKEFPKVNR 246 (407)
Q Consensus 167 ~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~~~~~~~~ysf~~g~v~fi~Lds~~~~~~~~~Q~~WL~~~L~~~~~ 246 (407)
+.+.||||... ......|. ...++ ...+ +.
T Consensus 75 ~lI~GNHD~~~----------~~~~~~~~-------------~~~~~--~~~~----------------------~~--- 104 (188)
T d1xm7a_ 75 ILVMGNHDKDK----------ESLKEYFD-------------EIYDF--YKII----------------------EH--- 104 (188)
T ss_dssp EEECCTTCCCH----------HHHTTTCS-------------EEESS--EEEE----------------------EE---
T ss_pred EEEecCCCchh----------hhhhhchh-------------hHHHH--HHHh----------------------hh---
Confidence 88999999731 01111110 00000 0001 11
Q ss_pred CCCCeEEEEeeccccccCCCCCCCChhHHHHHHHHHHhCCCcEEEeccccccc
Q 040421 247 SETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAYE 299 (407)
Q Consensus 247 ~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~ 299 (407)
. .-.|+++|.|+...... ........+..+..+.+++++|+||+|...
T Consensus 105 ~--g~~i~l~H~P~~~~~~~---~~~~~~~~~~~~~~~~~~~~~lhGH~H~~~ 152 (188)
T d1xm7a_ 105 K--GKRILLSHYPAKDPITE---RYPDRQEMVREIYFKENCDLLIHGHVHWNR 152 (188)
T ss_dssp T--TEEEEEESSCSSCSSCC---SCHHHHHHHHHHHHHTTCSEEEECCCCCCS
T ss_pred C--CeEEEEEeCCCcccccc---ccccchhHHHHHHHhcCceEEEEeeccCCc
Confidence 1 13789999998654432 123345577788999999999999999653
|
| >d3c9fa2 d.159.1.2 (A:16-337) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Candida albicans [TaxId: 5476]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Candida albicans [TaxId: 5476]
Probab=97.99 E-value=8.3e-06 Score=74.21 Aligned_cols=184 Identities=14% Similarity=0.159 Sum_probs=85.5
Q ss_pred CCCcEEEEEecCCCCCCc-------------hhh----HHHhhhCCCCCc-eEEEcCCccccCCCCCCCchhhhHHHHHH
Q 040421 96 DVPYTFGLIGDLGQTYYS-------------NRT----LTHYELNPIKGQ-TVLFVGDLSYADDYPFHDNNRWDTWGRFI 157 (407)
Q Consensus 96 ~~~~~f~~~gD~~~~~~~-------------~~~----l~~~~~~~~~~d-~vl~~GD~~y~~~~~~~~~~~~~~~~~~~ 157 (407)
-..++|+...|+|..... ... +++..+. .+++ ++|.+||++.................+.+
T Consensus 9 ~~~l~iLhtnD~Hg~l~~~~~~~~~~~~~gg~a~~~~~~~~~~~~-~~~~~llldaGD~~~Gt~~~~~~~~~G~~~~~~m 87 (322)
T d3c9fa2 9 WNDINFVHTTDTHGWYSGHINQPLYHANWGDFISFTTHMRRIAHS-RNQDLLLIDSGDRHDGNGLSDITSPNGLKSTPIF 87 (322)
T ss_dssp CCSEEEEEECCCTTCTTCCSSCGGGCCCHHHHHHHHHHHHHHHHH-TTCEEEEEECSCCCSSCHHHHSSSSTTTTTHHHH
T ss_pred cCEEEEEEEeccccCCCCccccccccCccccHHHHHHHHHHHHHh-cCCCEEEEECCccCCCCchhhhcccCChHHHHHH
Confidence 368999999999974210 111 2222222 2566 56679999964322110001111122222
Q ss_pred hhhhccCCe-EEccCCCccccCCCCCCcccccccccccccCCCCC--------C---CCCCeEEEEecC--cEEEEEEec
Q 040421 158 ERNAAYQPW-IWTVGNHEIDFAPQLGEAIPFKPFANRFHLPYRAP--------Y---STAPFWYSIRRA--SAHIIVMSC 223 (407)
Q Consensus 158 ~~~~~~~P~-~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~P~~~~--------~---~~~~~~ysf~~g--~v~fi~Lds 223 (407)
..+++ .+++||||+.+.... ...+......+..|.-.+ + .....|..+..+ .+.++.+..
T Consensus 88 ----n~lgyDa~t~GNHEfd~g~~~--l~~~~~~~~~~~fp~l~aNv~~~~~~~~~~~~~~~y~i~~~~~~~i~i~g~~~ 161 (322)
T d3c9fa2 88 ----IKQDYDLLTIGNHELYLWENS--KQEYETVVNHFQDKYVCSNVDIRLDNGLFVPLGLKYKYFTTPIRGIRVMAFGF 161 (322)
T ss_dssp ----TTSCCSEECCCGGGSSSHHHH--HHHHHHHHHHTTTTBBCSSEEEECTTSCEEESSBSCEEEECTTTCCEEEEEEC
T ss_pred ----hccCCcEEeecceecccchHH--HHHHHHHHHhcCCCEEeeeEEecCCCCcccccCCceEEEEECCCcEEEEEEee
Confidence 23454 678999998532100 000000111111221110 0 012344455554 478887765
Q ss_pred cccCCC--------C---hHHHHHHHHhccccCCCCCCeEEEEeeccccccCCCCCCCChhHHHHHHHHHHhC-CCc-EE
Q 040421 224 YSAFGK--------Y---TPQYKWLEKEFPKVNRSETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEY-KVD-VV 290 (407)
Q Consensus 224 ~~~~~~--------~---~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~-~vd-lv 290 (407)
...... . ..+..|+.+.++ .++..+|+++|.++-... . ........+.+.. +++ ++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~D~IV~l~H~g~~~d~------~-~~~~~~~~la~~~~~~~~~i 230 (322)
T d3c9fa2 162 LFDFKRFNSGTRVTPMAETIHEPWFQEALK----HEVDLIIIVGHTPISHNW------G-EFYQVHQYLRQFFPDTIIQY 230 (322)
T ss_dssp CCCCCCCCTTEEECCHHHHTTSHHHHHHTT----SCCSEEEEECSSCCCTTT------C-HHHHHHHHHHHHCTTSEEEE
T ss_pred ccccccCCCCcEEeCHHHHHHHHHHHHHHh----CCCCEEEEEecCCccccc------c-ccchHHHHHHHhCCCCCEEE
Confidence 322111 0 112235554443 456789999998863221 1 1111112222222 344 69
Q ss_pred Eeccccc
Q 040421 291 FAAHVHA 297 (407)
Q Consensus 291 l~GH~H~ 297 (407)
|.||+|.
T Consensus 231 igGHsH~ 237 (322)
T d3c9fa2 231 FGGHSHI 237 (322)
T ss_dssp EECSSCC
T ss_pred ecccccc
Confidence 9999995
|
| >d2z1aa2 d.159.1.2 (A:28-329) 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain domain: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain species: Thermus thermophilus [TaxId: 274]
Probab=97.83 E-value=0.00014 Score=65.27 Aligned_cols=175 Identities=17% Similarity=0.102 Sum_probs=84.9
Q ss_pred CcEEEEEecCCCCCC--------------chh----hHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhh
Q 040421 98 PYTFGLIGDLGQTYY--------------SNR----TLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIER 159 (407)
Q Consensus 98 ~~~f~~~gD~~~~~~--------------~~~----~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~ 159 (407)
.++|+..+|+|.... ... .++++.++ ...-++|.+||++...... .........+.++.
T Consensus 2 tl~IlhtnD~Hg~l~~~~~~~~~~~~~~gG~ar~~t~i~~~r~~-~~~~l~ldaGD~~~Gs~~~--~~~~g~~~~~~~n~ 78 (302)
T d2z1aa2 2 TLTLVHTNDTHAHLEPVELTLSGEKTPVGGVARRVALFDRVWAR-AKNPLFLDAGDVFQGTLYF--NQYRGLADRYFMHR 78 (302)
T ss_dssp EEEEEEECCCTTCCSCEEEECSSSEEEECCHHHHHHHHHHHHHH-SSSEEEEECSCCSSSSHHH--HHHTTHHHHHHHHH
T ss_pred EEEEEEEcccccCcccccccccCCccccCcHHHHHHHHHHHHHh-CCCeEEEEcCCCCCCCHhH--hhhcchhHHHHHHh
Confidence 368899999986421 111 23333333 1335888999999542110 00011112233332
Q ss_pred hhccCCeEEccCCCccccCCCCCCcccccccccccccCC---C----C---CCCCCCeEEEEecCcEE--EEEEeccc--
Q 040421 160 NAAYQPWIWTVGNHEIDFAPQLGEAIPFKPFANRFHLPY---R----A---PYSTAPFWYSIRRASAH--IIVMSCYS-- 225 (407)
Q Consensus 160 ~~~~~P~~~~~GNHD~~~~~~~~~~~~~~~~~~~f~~P~---~----~---~~~~~~~~ysf~~g~v~--fi~Lds~~-- 225 (407)
+ -.=..++||||+.+... .+..+.....+|. | . ....-..|.-.+.++++ ||.+-+..
T Consensus 79 ~---gyDa~~~GNHEfd~G~~-----~l~~~~~~~~~p~l~aNi~~~~~~~~~~~~~~y~i~~~~g~kIgiiG~~t~~~~ 150 (302)
T d2z1aa2 79 L---RYRAMALGNHEFDLGPG-----PLADFLKGARFKVVSANVDASREPRLKGLFAPYAVVVVGGERVGIIGLTTPDTR 150 (302)
T ss_dssp T---TCCEEECCGGGGTTCHH-----HHHHHHTTCCSEEECTTEECTTCGGGTTSCBSEEEEEETTEEEEEEEEECTTHH
T ss_pred c---ccccccccchhhhcChh-----HHHHHhhhcccceeEeeeeccccccccCccceeEEEEECCeEEEEEeccccccc
Confidence 2 23366899999964310 0000000000110 0 0 00112345667778865 45544421
Q ss_pred -------c--CCCChHHHHHHHHhccccCCCCCCeEEEEeeccccccCCCCCCCChhHHHHHHHHHHhC-CCcEEEeccc
Q 040421 226 -------A--FGKYTPQYKWLEKEFPKVNRSETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEY-KVDVVFAAHV 295 (407)
Q Consensus 226 -------~--~~~~~~Q~~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~-~vdlvl~GH~ 295 (407)
. +....+..++..+.|++ .+..-+|++.|...-. -..+.++. +||++++||.
T Consensus 151 ~~~~~~~~~~~~d~~~~~~~~~~~l~~---~~~DiiV~l~H~g~~~---------------d~~la~~~~giD~ii~gh~ 212 (302)
T d2z1aa2 151 EISNPGPTVAFLDPYESAQKAVYELLA---KGVNKIVVLSHLGYGE---------------DLKLARRLVGVQVIVGGHS 212 (302)
T ss_dssp HHSCCCTTCEECCHHHHHHHHHHHHHH---TTCCCEEEEEESCHHH---------------HHHHHTTCSSCCEEEECSS
T ss_pred ccccccCcccccCHHHHHHHHHHHhhc---cCCCEEEEeeccCcch---------------hhHHHhcCCCeeeeecCcc
Confidence 0 01112334444555544 4566899999986311 01233333 7999999999
Q ss_pred cccccc
Q 040421 296 HAYERS 301 (407)
Q Consensus 296 H~y~r~ 301 (407)
|..-..
T Consensus 213 h~~~~~ 218 (302)
T d2z1aa2 213 HTLLGS 218 (302)
T ss_dssp CCCBSC
T ss_pred ceeecc
Confidence 975443
|
| >d1x4xa1 b.1.2.1 (A:8-100) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.55 E-value=8.6e-05 Score=53.84 Aligned_cols=72 Identities=21% Similarity=0.283 Sum_probs=47.5
Q ss_pred CCCCCcEEEEEEcCCCCC----CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc----
Q 040421 7 DHEGKGVIVSWVTPDEPG----SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV---- 78 (407)
Q Consensus 7 ~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~---- 78 (407)
....+++.|.|.-+.... .-.|+|............+. ....+|++|+|++.|.+||..
T Consensus 11 ~~s~~si~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~-------------~~~~~i~~L~p~t~Y~~~V~A~n~~ 77 (93)
T d1x4xa1 11 CRSATCAQVNWEVPLSNGTDVTEYRLEWGGVEGSMQICYCGP-------------GLSYEIKGLSPATTYYCRVQALSVV 77 (93)
T ss_dssp EEETTEEEEECCCCSCSSSCCCEEEEEEESSTTSCCEEEEES-------------CSEEEEESCCSSCEEEEEEEEECSS
T ss_pred EeCCCeEEEEEEecccCCCeeEEEEEEEccCCCcceEeecCC-------------ccEEEEcccceeeEEEEEEEEEECC
Confidence 335689999998654322 24566766655433322211 123568999999999999954
Q ss_pred --CCceeeEEEEcCC
Q 040421 79 --GNATRQFSFTTPP 91 (407)
Q Consensus 79 --~~~s~~~~F~T~p 91 (407)
+.+|+...|+|+|
T Consensus 78 G~s~~S~~~~~~Tpp 92 (93)
T d1x4xa1 78 GAGPFSEVVACVTPP 92 (93)
T ss_dssp CCCCBCCCEEEECCC
T ss_pred cCcCCCCcEEEEeCC
Confidence 2567888999976
|
| >d1x5aa1 b.1.2.1 (A:8-101) Ephrin type-A receptor 1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ephrin type-A receptor 1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.52 E-value=5.2e-05 Score=55.38 Aligned_cols=76 Identities=14% Similarity=0.214 Sum_probs=47.3
Q ss_pred eeeccCCCCCcEEEEEEcCCC-CCCC----EEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEe
Q 040421 2 HITQGDHEGKGVIVSWVTPDE-PGSN----TVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEV 76 (407)
Q Consensus 2 ~l~~g~~~~~~~~v~W~t~~~-~~~~----~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v 76 (407)
.|.+-+..+++|+|+|.-... .... .|.|....+ ..... . . ...++|+||+|+|.|.+||
T Consensus 8 ~L~~~~~~~~si~vsW~~p~~~~~~~~i~Y~i~~~~~~~--~~~~~------~--~-----~t~~~i~~L~p~t~Y~~rV 72 (94)
T d1x5aa1 8 SLKLVKKEPRQLELTWAGSRPRNPGGNLSYELHVLNQDE--EWHQM------V--L-----EPRVLLTKLQPDTTYIVRV 72 (94)
T ss_dssp CCCEEEEETTEEEEECCCCCSSCCSSCCEEEEEEECSSC--EEEEE------E--S-----SSEEEEESCCSSCEEEEEE
T ss_pred ceEEEEcCCCEEEEEEecccCCCCCcEEEEEEEEecCCc--eEEEe------e--c-----cCEEEECCCCCCCEEEEEE
Confidence 344555567899999986532 2223 333443332 11110 0 0 1246799999999999999
Q ss_pred Cc------CCceeeEEEEcCCC
Q 040421 77 GV------GNATRQFSFTTPPG 92 (407)
Q Consensus 77 ~~------~~~s~~~~F~T~p~ 92 (407)
.. +.+|+...|+|.|+
T Consensus 73 ~A~n~~G~g~~S~~~~~~T~PP 94 (94)
T d1x5aa1 73 RTLTPLGPGPFSPDHEFRTSPP 94 (94)
T ss_dssp EEECSSSCCCCCCCEEEECCCC
T ss_pred EEEcCCcCcCCCCCEEEEeCCC
Confidence 53 35788999999863
|
| >d1x5xa1 b.1.2.1 (A:8-103) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.39 E-value=0.00016 Score=52.47 Aligned_cols=74 Identities=20% Similarity=0.147 Sum_probs=44.3
Q ss_pred CCCCCcEEEEEEcCCCCC----CC-EEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCcC--
Q 040421 7 DHEGKGVIVSWVTPDEPG----SN-TVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGVG-- 79 (407)
Q Consensus 7 ~~~~~~~~v~W~t~~~~~----~~-~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~~-- 79 (407)
....++++|.|.-+.... .. .++|............... .....+|+||+|+|.|.+||..-
T Consensus 11 ~~~~~si~l~W~~p~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~-----------~~~~~~v~~L~p~t~Y~~rV~A~n~ 79 (96)
T d1x5xa1 11 KAGITWLSLQWSKPSGTPSDEGISYILEMEEETSGYGFKPKYDG-----------EDLAYTVKNLRRSTKYKFKVIAYNS 79 (96)
T ss_dssp EECSSEEEEECCCCSSCCSSSSCEEEEEECCSSSSCCCEEEEEE-----------SCSEEEEESCCSSCEEEEEEEEECS
T ss_pred EecCCEEEEEEEeecccCcceEeeeEEEeeeccceeeeEEeecC-----------CCCEEEECCCCCCCEEEEEEEEEcC
Confidence 345689999998754322 12 3444433332222221110 11246789999999999999642
Q ss_pred ----CceeeEEEEcCC
Q 040421 80 ----NATRQFSFTTPP 91 (407)
Q Consensus 80 ----~~s~~~~F~T~p 91 (407)
.+|....|+|.|
T Consensus 80 ~G~s~~S~~~~~~T~p 95 (96)
T d1x5xa1 80 EGKSNPSEVVEFTTCP 95 (96)
T ss_dssp SCEEEECCCEEEECCC
T ss_pred CcEeCCCCCEEEEeCc
Confidence 356778899976
|
| >d1qg3a1 b.1.2.1 (A:1126-1217) Integrin beta-4 subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Integrin beta-4 subunit species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.36 E-value=0.00041 Score=49.83 Aligned_cols=77 Identities=14% Similarity=0.193 Sum_probs=50.2
Q ss_pred eeccCCCCCcEEEEEEcCCCC-CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc---
Q 040421 3 ITQGDHEGKGVIVSWVTPDEP-GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV--- 78 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~--- 78 (407)
|......++++.|.|.-+... ....|+|.............. .....+.|++|+|+|.|.+||..
T Consensus 8 ~~~~~~s~~si~l~W~~p~~~~~~Y~i~y~~~~~~~~~~~~~~-----------~~~~~~~i~~L~p~t~Y~~~V~A~n~ 76 (92)
T d1qg3a1 8 PNAKAAGSRKIHFNWLPPSGKPMGYRVKYWIQGDSESEAHLLD-----------SKVPSVELTNLYPYCDYEMKVCAYGA 76 (92)
T ss_dssp EEEEECSTTCEEEEEECCSSCCCEEEEEEEETTSCGGGCEEEE-----------ESSSEEEECSCCTTCEEEEEEEEECS
T ss_pred CEEEEccCCEEEEEEEecCCCccceEEeeeeccccccEEEEec-----------CCccEEEECCCCCCcEEEEEEEEEeC
Confidence 344445678999999987533 235677877654433222111 11235778999999999999954
Q ss_pred ---CCceeeEEEEcC
Q 040421 79 ---GNATRQFSFTTP 90 (407)
Q Consensus 79 ---~~~s~~~~F~T~ 90 (407)
+.+|....|+|+
T Consensus 77 ~G~g~~S~~~~~~T~ 91 (92)
T d1qg3a1 77 QGEGPYSSLVSCRTH 91 (92)
T ss_dssp SCBCCCCCCEEEECC
T ss_pred CcCcCCCCCEEEEcC
Confidence 346777788884
|
| >d2djsa1 b.1.2.1 (A:8-102) Ephrin type-B receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ephrin type-B receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.29 E-value=0.0002 Score=51.80 Aligned_cols=77 Identities=16% Similarity=0.276 Sum_probs=47.8
Q ss_pred eccCCCCCcEEEEEEcCCCCCCC----EEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCcC
Q 040421 4 TQGDHEGKGVIVSWVTPDEPGSN----TVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGVG 79 (407)
Q Consensus 4 ~~g~~~~~~~~v~W~t~~~~~~~----~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~~ 79 (407)
.....++++++|.|.-+...... .|+|............... ....++|.+|+|+|.|.+||..-
T Consensus 8 ~~~~~t~~si~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~-----------~~~~~~i~~L~p~t~Y~~~V~A~ 76 (95)
T d2djsa1 8 HQVSATMRSITLSWPQPEQPNGIILDYEIRYYEKEHNEFNSSMARS-----------QTNTARIDGLRPGMVYVVQVRAR 76 (95)
T ss_dssp EEEEECSSEEEEECCCCSCCSSCEEEEEEEEEETTSCSTTCEEEEE-----------SSSEEEEESCCTTCEEEEEEEEE
T ss_pred EEEeecCCEEEEEEEECCCCCcceEEeeeeeeeeccCcceeEeecC-----------CccEEEEeecCCccEEEEEEEEE
Confidence 34445678999999876543323 3445554433222111110 12356799999999999999542
Q ss_pred ------CceeeEEEEcCC
Q 040421 80 ------NATRQFSFTTPP 91 (407)
Q Consensus 80 ------~~s~~~~F~T~p 91 (407)
.+|+...|+|.|
T Consensus 77 n~~G~g~~S~~~~~~T~~ 94 (95)
T d2djsa1 77 TVAGYGKFSGKMCFQTLT 94 (95)
T ss_dssp ESSCEEEECCCEEEECCC
T ss_pred cCCCCCCCCCCEEEEeCC
Confidence 457788899976
|
| >d1x5la1 b.1.2.1 (A:8-105) Ephrin type-A receptor 8 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ephrin type-A receptor 8 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.29 E-value=0.00037 Score=50.93 Aligned_cols=77 Identities=18% Similarity=0.382 Sum_probs=50.4
Q ss_pred eeccCCCCCcEEEEEEcCCCCC----CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 3 ITQGDHEGKGVIVSWVTPDEPG----SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
|.......+++.|.|..+.... .-.|+|...++.......-. ......+|+||+|++.|.+||..
T Consensus 10 ~~~~~~s~~si~v~W~~P~~~~g~i~~Y~v~y~~~~~~~~~~~~~~-----------~~~~~~~i~~L~p~t~Y~~~V~a 78 (98)
T d1x5la1 10 IRQERAGQTSVSLLWQEPEQPNGIILEYEIKYYEKDKEMQSYSTLK-----------AVTTRATVSGLKPGTRYVFQVRA 78 (98)
T ss_dssp EECSCBCSSCEEEEECCCSCCCSCCCEEEEEEEESSSCCSSCEEEE-----------ESSSEEEECSCCTTCEEEECEEE
T ss_pred eEEEeccCCEEEEEEECCCCCCCCEEEEEEEeecccccceeeEEec-----------CCceEEEECCCCCCCEEEEEEEE
Confidence 4455566789999999764332 34577877554322211110 11235679999999999999954
Q ss_pred ------CCceeeEEEEcC
Q 040421 79 ------GNATRQFSFTTP 90 (407)
Q Consensus 79 ------~~~s~~~~F~T~ 90 (407)
+.+|....|+|.
T Consensus 79 ~n~~G~g~~S~~v~~~T~ 96 (98)
T d1x5la1 79 RTSAGCGRFSQAMEVETG 96 (98)
T ss_dssp EETTEECCCCCCEEEECC
T ss_pred EcCCCCcCCCCCEEEEcC
Confidence 356888899985
|
| >d1x5ka1 b.1.2.1 (A:8-118) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.18 E-value=0.0008 Score=49.91 Aligned_cols=77 Identities=22% Similarity=0.424 Sum_probs=46.5
Q ss_pred cCCCCCcEEEEEEcCCCCCC----CEEEEeecCCCCceE-EEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc--
Q 040421 6 GDHEGKGVIVSWVTPDEPGS----NTVLYWAENSTLKQQ-AHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV-- 78 (407)
Q Consensus 6 g~~~~~~~~v~W~t~~~~~~----~~v~y~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~-- 78 (407)
.....+++.|.|.-+..... ..|.|....+..... .... . ..-....+|.+|+|++.|.+||..
T Consensus 23 ~~~~~~sv~v~W~~P~~~~g~i~~Y~i~~~~~~~~~~~~~~~~~---~------~~~~~~~~i~~L~p~t~Y~~~V~A~n 93 (111)
T d1x5ka1 23 KEGKPKTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHDWVIEP---V------VGNRLTHQIQELTLDTPYYFKIQARN 93 (111)
T ss_dssp CSSCTTCEEEEEECCSCCSSCCCEEEEEEESCSSSCTTTSEEEE---E------STTCSEEEECSCCSSSEEEEEEEEEC
T ss_pred ecCCCCEEEEEEEccccCCCceeeeEEeeeecCCCCcceeEEEE---e------CCCeeEEEECCCCCCCEEEEEEEEEc
Confidence 34456799999997643221 255665544322110 1111 0 112234678999999999999954
Q ss_pred ----CCceeeEEEEcCC
Q 040421 79 ----GNATRQFSFTTPP 91 (407)
Q Consensus 79 ----~~~s~~~~F~T~p 91 (407)
+.+|+...|+|+.
T Consensus 94 ~~G~g~~S~~v~~~T~~ 110 (111)
T d1x5ka1 94 SKGMGPMSEAVQFRTPK 110 (111)
T ss_dssp SSCBCCCCCCEEEECCC
T ss_pred CCCCcCCCCCEEEECCC
Confidence 3567888899864
|
| >d2haza1 b.1.2.1 (A:489-589) Neural cell adhesion molecule 1, NCAM {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neural cell adhesion molecule 1, NCAM species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.18 E-value=0.00047 Score=50.60 Aligned_cols=76 Identities=17% Similarity=0.188 Sum_probs=47.6
Q ss_pred CCCcEEEEEEcCCCCC-----CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc-----
Q 040421 9 EGKGVIVSWVTPDEPG-----SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV----- 78 (407)
Q Consensus 9 ~~~~~~v~W~t~~~~~-----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~----- 78 (407)
.+++++|.|.-+...+ .-.|+|....+..+....... . .......++|+||+|+|.|.+||..
T Consensus 14 ~~~sv~l~W~~P~~~gg~~I~~Y~v~~~~~~~~~~~~~~~~~---~----~~~~~~~~~i~~L~p~t~Y~frV~A~N~~G 86 (101)
T d2haza1 14 YSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDA---K----EASMEGIVTIVGLKPETTYAVRLAALNGKG 86 (101)
T ss_dssp CSSCEEEEEECCSCCTTSCCCEEEEEEEETTCCCCEEEEEEH---H----HHHHHSEEEECSCCTTCEEEEEEEEEETTE
T ss_pred eCCEEEEEEeCCCcCccccEEEEEEEEeecCCcceeeeeeee---e----cccceeEEEecCCCCCeEEEEEEEEEeCCc
Confidence 4578999999764321 245777766543332211110 0 0111234789999999999999954
Q ss_pred -CCceeeEEEEcCC
Q 040421 79 -GNATRQFSFTTPP 91 (407)
Q Consensus 79 -~~~s~~~~F~T~p 91 (407)
+.+|....|+|.|
T Consensus 87 ~g~~S~~~~~~T~P 100 (101)
T d2haza1 87 LGEISAASEFKTQP 100 (101)
T ss_dssp ECCCCCCEEEECCC
T ss_pred CcCCCCceeEEeCC
Confidence 3567788899976
|
| >d2crza1 b.1.2.1 (A:8-104) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.11 E-value=0.0007 Score=49.30 Aligned_cols=73 Identities=16% Similarity=0.231 Sum_probs=47.1
Q ss_pred CCCCCcEEEEEEcCCCC-----CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc---
Q 040421 7 DHEGKGVIVSWVTPDEP-----GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV--- 78 (407)
Q Consensus 7 ~~~~~~~~v~W~t~~~~-----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~--- 78 (407)
....++++|+|.-+... ..-.|+|.......+..+. .. ....++|++|+|++.|.+||..
T Consensus 13 ~~~~~sv~l~W~~P~~~gg~~i~~Y~v~~~~~~~~~~~~~~-~~-----------~~~~~~v~~L~p~t~Y~frV~A~N~ 80 (97)
T d2crza1 13 RPKAKEIQLRWGPPLVDGGSPISCYSVEMSPIEKDEPREVY-QG-----------SEVECTVSSLLPGKTYSFRLRAANK 80 (97)
T ss_dssp CCCSSEEEEECCCCSCCTTSCCCEEEEEEECTTSCCCEEEE-EE-----------SCSEEEEESCCTTCEEEECCEEECS
T ss_pred eeeCCEEEEEEeCCCcCCCCceeEEEEEEEcCcCCceeEee-cC-----------CceEEEEcCCCCCEEEEEEEEEecC
Confidence 34568999999965321 2356777765544433221 10 1123578999999999999954
Q ss_pred ---CCceeeEEEEcCC
Q 040421 79 ---GNATRQFSFTTPP 91 (407)
Q Consensus 79 ---~~~s~~~~F~T~p 91 (407)
+.+|+...++|.|
T Consensus 81 ~G~s~~S~~~~~~T~p 96 (97)
T d2crza1 81 MGFGPFSEKCDITTAP 96 (97)
T ss_dssp SCBCCCCCCEEEECCC
T ss_pred CeEcCCcCCCeEEeCc
Confidence 2467788888875
|
| >d2b5ib2 b.1.2.1 (B:104-207) Interleukin-2 receptor beta chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interleukin-2 receptor beta chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.07 E-value=0.00046 Score=50.64 Aligned_cols=79 Identities=19% Similarity=0.249 Sum_probs=49.0
Q ss_pred eeccCCCCCcEEEEEEcCCCCC------CCEEEEeecCCCCc-eEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEE
Q 040421 3 ITQGDHEGKGVIVSWVTPDEPG------SNTVLYWAENSTLK-QQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYE 75 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~~------~~~v~y~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~ 75 (407)
|++...+++++.|.|..+.... ...|+|....+... ...... ......+.|+||+|+|.|.+|
T Consensus 9 l~v~~~~~~s~~l~W~~p~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~----------~~~~~~~~i~~L~p~t~Y~~r 78 (104)
T d2b5ib2 9 LQVVHVETHRCNISWEISQASHYFERHLEFEARTLSPGHTWEEAPLLTL----------KQKQEWICLETLTPDTQYEFQ 78 (104)
T ss_dssp EEEEEECSSCEEEEEECCSCCGGGTTCEEEEEEEECTTSCSTTSCCEEE----------CSCCCEEEECSCCTTCEEEEE
T ss_pred cEEEEEeCCEEEEEEccccccccccceeEEEEEEecccccceeeeEEec----------CCCcEEEEECCCCCCCEEEEE
Confidence 4555556789999998874321 12466665544211 111100 112334688999999999999
Q ss_pred eCc----C------CceeeEEEEcCC
Q 040421 76 VGV----G------NATRQFSFTTPP 91 (407)
Q Consensus 76 v~~----~------~~s~~~~F~T~p 91 (407)
|.. + .||+...|+|.|
T Consensus 79 Vra~~~~g~~g~wS~wS~~v~~~T~P 104 (104)
T d2b5ib2 79 VRVKPLQGEFTTWSPWSQPLAFRTKP 104 (104)
T ss_dssp EEEEESCCSSCCCCCCCCCEEEECCC
T ss_pred EEEEECCCCCCCCCCCcCCEEEECCC
Confidence 964 1 357788999976
|
| >d1tdqa2 b.1.2.1 (A:94-185) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=97.06 E-value=0.0018 Score=46.06 Aligned_cols=68 Identities=13% Similarity=0.151 Sum_probs=44.0
Q ss_pred eeccCCCCCcEEEEEEcCCCC-CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 3 ITQGDHEGKGVIVSWVTPDEP-GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
|.+.....++++|.|.-+... ....|+|....+.......... ...-...++|.||+|+|.|.++|..
T Consensus 7 l~v~~~~~~sv~v~W~~p~~~~~~y~v~y~~~~~~~~~~~~~~~--------~~~~~~~~~i~~L~p~t~Y~~~V~a 75 (92)
T d1tdqa2 7 LRVGSRTATSLDLEWDNSEAEAQEYKVVYSTLAGEQYHEVLVPK--------GIGPTTKTTLTDLVPGTEYGVGISA 75 (92)
T ss_dssp EEEEEECSSCEEEEEECCSSCCSEEEEEEEETTCCCCEEEEEEC--------CSSSEEEEEECSCCTTCEEEEEEEE
T ss_pred CEEEEecCCEEEEEEEecCCcccceEEEEEEcCCCcceeeEEEe--------cCCCeeEEEECCccCCCEEEEEEEE
Confidence 444455678999999886543 3456778876543332221110 1223456799999999999999965
|
| >d1x5fa1 b.1.2.1 (A:8-114) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.98 E-value=0.00096 Score=49.44 Aligned_cols=79 Identities=18% Similarity=0.264 Sum_probs=48.3
Q ss_pred eeccCCCCCcEEEEEEcCCCCC-----CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeC
Q 040421 3 ITQGDHEGKGVIVSWVTPDEPG-----SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVG 77 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~~-----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~ 77 (407)
|.......++|+|.|.-+.... ...|.|...+........ . .......++|++|.|++.|.+||.
T Consensus 17 l~~~~~~~~sv~lsW~~P~~~~~~~i~~Y~v~~~~~~~~~~~~~~-~---------~~~~~~~~~~~~L~p~t~Y~~rV~ 86 (107)
T d1x5fa1 17 VVASLVSTRFIKLTWRTPASDPHGDNLTYSVFYTKEGIARERVEN-T---------SHPGEMQVTIQNLMPATVYIFRVM 86 (107)
T ss_dssp EEEEEECSSCEEEEEECCSSCSSCCSSEEEEEEEETTCCCCEEEE-C---------SSTTCSEEEECSCCTTCEEEEEEE
T ss_pred cEEEEecCCEEEEEEECCccCCCCceEEEEEEEEeCCCCceEEEE-E---------eCCCccEEEecCCCCCCEEEEEEE
Confidence 3444445789999998653211 236666665443322111 0 112245688999999999999996
Q ss_pred cC------CceeeEEEEcCC
Q 040421 78 VG------NATRQFSFTTPP 91 (407)
Q Consensus 78 ~~------~~s~~~~F~T~p 91 (407)
.- .+|....++|.|
T Consensus 87 A~n~~G~g~~S~~i~v~T~~ 106 (107)
T d1x5fa1 87 AQNKHGSGESSAPLRVETQP 106 (107)
T ss_dssp EECSSCEEEECCCEEEECCC
T ss_pred EEeCCCCcCCCCCEEEECCC
Confidence 42 346777888865
|
| >d1cd9b2 b.1.2.1 (B:108-213) Granulocyte colony-stimulating factor (GC-SF) receptor {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Granulocyte colony-stimulating factor (GC-SF) receptor species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.96 E-value=0.0015 Score=48.18 Aligned_cols=72 Identities=10% Similarity=0.096 Sum_probs=45.5
Q ss_pred CCCCcEEEEEEcCCCCCC----CEEEEeecCCC-CceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc----
Q 040421 8 HEGKGVIVSWVTPDEPGS----NTVLYWAENST-LKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV---- 78 (407)
Q Consensus 8 ~~~~~~~v~W~t~~~~~~----~~v~y~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~---- 78 (407)
..++++.|.|........ ..|+|....+. .+..+.-. ..-.+..+|++|.|+|.|.+||..
T Consensus 19 ~~~~~i~v~W~pp~~~~~~~~~Y~i~y~~~~~~~~w~~v~~~----------~~~~~~~~l~~L~p~t~Y~frVra~~~~ 88 (106)
T d1cd9b2 19 HQPGCLWLSWKPWKPSEYMEQECELRYQPQLKGANWTLVFHL----------PSSKDQFELCGLHQAPVYTLQMRCIRSS 88 (106)
T ss_dssp -CCSCEEEEEECCGGGTTSCEEEEEEEEESSTTCCCEEEEEE----------ESCEEEEEECCCCSCSCEEEEEEEEESS
T ss_pred CCCCEEEEEEcCcccCCccceEEEEEEeeccccccceeeecc----------cCCceEEEEeccCCCeEEEEEEEEEeCC
Confidence 456799999997643322 37888875433 33333211 112455678999999999999954
Q ss_pred --C---CceeeEEEEc
Q 040421 79 --G---NATRQFSFTT 89 (407)
Q Consensus 79 --~---~~s~~~~F~T 89 (407)
+ .||...+|+|
T Consensus 89 g~g~wS~wS~~~~~~~ 104 (106)
T d1cd9b2 89 LPGFWSPWSPGLQLRP 104 (106)
T ss_dssp SCCCCCCCCCCEEECC
T ss_pred CCCCCcCCCCCeEecC
Confidence 1 3566677665
|
| >d2ibga1 b.1.2.1 (A:573-667) Hedgehog receptor iHog {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Hedgehog receptor iHog species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=96.95 E-value=0.0017 Score=46.75 Aligned_cols=67 Identities=13% Similarity=0.226 Sum_probs=41.8
Q ss_pred eeccCCCCCcEEEEEEcCCCCC-----CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeC
Q 040421 3 ITQGDHEGKGVIVSWVTPDEPG-----SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVG 77 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~~-----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~ 77 (407)
|......++++.|.|..+.... .-.|+|+..+........ .. . ........|+||+|+|.|.+||.
T Consensus 13 ~~v~~~s~tsv~l~W~~P~~~~~~~i~gY~i~y~~~~~~~~~~~~-~~---~-----~~~~~~~~i~~L~p~t~Y~~~V~ 83 (95)
T d2ibga1 13 LEIEEYSETAVVLHWSLASDADEHLITGYYAYYRPSSSAGEYFKA-TI---E-----GAHARSFKIAPLETATMYEFKLQ 83 (95)
T ss_dssp CCCBCCSSSCEEEEEECCTTCCGGGCCEEEEEEEETTCCSCCEEE-EE---E-----CTTCCEEEECSCCTTCEEEEEEE
T ss_pred eEEEEeCCCEEEEEEEeeeeccCCcccccceeEeeeeecceeeee-ec---c-----CCceeEEEEeeccCCeEEEEEEE
Confidence 4555666789999998653222 136788876543221111 11 0 11234568999999999999996
Q ss_pred c
Q 040421 78 V 78 (407)
Q Consensus 78 ~ 78 (407)
.
T Consensus 84 A 84 (95)
T d2ibga1 84 S 84 (95)
T ss_dssp E
T ss_pred E
Confidence 5
|
| >d1fnfa3 b.1.2.1 (A:1327-1415) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.95 E-value=0.0017 Score=46.11 Aligned_cols=67 Identities=15% Similarity=0.217 Sum_probs=44.7
Q ss_pred eeeccCCCCCcEEEEEEcCCCC-CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 2 HITQGDHEGKGVIVSWVTPDEP-GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 2 ~l~~g~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
.|.+.+.+.++++|.|.-+... ....|+|............ . .. .-...+.|++|+|++.|.++|..
T Consensus 6 ~l~v~~vt~~sv~l~W~~p~~~~~~Y~i~~~~~~~~~~~~~~-~---v~------~~~~~~~i~~L~p~t~Y~~~V~a 73 (89)
T d1fnfa3 6 GIDFSDITANSFTVHWIAPRATITGYRIRHHPEHFSGRPRED-R---VP------HSRNSITLTNLTPGTEYVVSIVA 73 (89)
T ss_dssp EEEEESCCSSEEEEEEECCSSCCSEEEEEEECSCCSSCCEEE-E---EE------TTCCEEEEESCCTTCEEEEEEEE
T ss_pred CCEEEEecCCEEEEEEEeCCCEEeeEEEEEEECCCCCceEEE-E---EC------CCccEEEECCCcccCEEEEEEEE
Confidence 4666777889999999986543 3346888876554332111 1 11 11335688999999999999965
|
| >d2d9qb2 b.1.2.1 (B:204-308) Granulocyte colony-stimulating factor (GC-SF) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Granulocyte colony-stimulating factor (GC-SF) receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.91 E-value=0.0024 Score=46.90 Aligned_cols=74 Identities=11% Similarity=0.037 Sum_probs=46.4
Q ss_pred CCCCcEEEEEEcCCCCC----CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc-----
Q 040421 8 HEGKGVIVSWVTPDEPG----SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV----- 78 (407)
Q Consensus 8 ~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~----- 78 (407)
..+++++|.|.-..... ...|+|....+......... ...-....+|++|+|+|.|.+||..
T Consensus 18 ~~~~~v~l~W~pp~~~~~~~~~y~i~y~~~~~~~~~~~~~~---------~~~~~~~~~i~~L~p~t~Y~frVra~n~~g 88 (105)
T d2d9qb2 18 PQAGCLQLSWEPWQPGLHINQKCELRHKPQRGEASWALVGP---------LPLEALQYELCGLLPATAYTLQIRCIRWPL 88 (105)
T ss_dssp -CCSCEEEEEECCGGGTTSCEEEEEEEEESSSCCCCEEEEE---------ECSCEEEEEECSCCSCCCEEEEEEEEECSS
T ss_pred CCCCeEEEEEcCCCCCCceeEEEEEEEEecCCccceeeeec---------ccCCcceeEEecccCCeEEEEEEEEEeCCC
Confidence 35689999999764222 35677877554322222111 1123456789999999999999953
Q ss_pred -C---CceeeEEEEcC
Q 040421 79 -G---NATRQFSFTTP 90 (407)
Q Consensus 79 -~---~~s~~~~F~T~ 90 (407)
+ .||+..+++|.
T Consensus 89 ~G~~S~wS~~~~~~t~ 104 (105)
T d2d9qb2 89 PGHWSDWSPSLELRTT 104 (105)
T ss_dssp CCCCCCCCCCEEECCC
T ss_pred CCCCcCCCCCEEEeCC
Confidence 1 36677777763
|
| >d2vkwa2 b.1.2.1 (A:601-693) Neural cell adhesion molecule 1, NCAM {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neural cell adhesion molecule 1, NCAM species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.90 E-value=0.0023 Score=45.78 Aligned_cols=77 Identities=22% Similarity=0.346 Sum_probs=47.5
Q ss_pred eeccCCCCCcEEEEEEcCCCCC----CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 3 ITQGDHEGKGVIVSWVTPDEPG----SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
|.+-....++++|.|..+.... .-.|+|....+....... . ......++|++|+|++.|.+||..
T Consensus 7 ~~~~~~~~~sv~l~W~~p~~~~~~I~~Y~i~~~~~~~~~~~~~~--~---------~~~~~~~~i~~L~p~t~Y~~~V~A 75 (93)
T d2vkwa2 7 EGQMGEDGNSIKVNLIKQDDGGSPIRHYLVRYRALSSEWKPEIR--L---------PSGSDHVMLKSLDWNAEYEVYVVA 75 (93)
T ss_dssp EEEECTTSSCEEEEEECCCCTTSCCCEEEEEEEETTSCCCCCEE--E---------CTTCCEEEECSCCTTCEEEEEEEE
T ss_pred CEeEEcCCCEEEEEeeCCCCCcCceEEEEEEeeecCcceeeeee--c---------cCCceEEEEeccccceEEEEEEEE
Confidence 3444556789999999875432 346777776643221111 0 011234678999999999999965
Q ss_pred C---Cce--eeEEEEcC
Q 040421 79 G---NAT--RQFSFTTP 90 (407)
Q Consensus 79 ~---~~s--~~~~F~T~ 90 (407)
- +.+ ....|+|.
T Consensus 76 ~N~~G~s~ps~~~~~T~ 92 (93)
T d2vkwa2 76 ENQQGKSKAAHFVFRTA 92 (93)
T ss_dssp EETTEECCCEEEEEECC
T ss_pred EcCCCCcCCEeEEEEec
Confidence 2 122 24678874
|
| >d3d48r2 b.1.2.1 (R:101-204) Prolactin receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Prolactin receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.85 E-value=0.0023 Score=46.63 Aligned_cols=72 Identities=13% Similarity=0.089 Sum_probs=40.6
Q ss_pred CCCCCcEEEEEEcCCCCC----CC----EEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 7 DHEGKGVIVSWVTPDEPG----SN----TVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 7 ~~~~~~~~v~W~t~~~~~----~~----~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
+...+++.|.|..+.... .. .++|....+........ .....++|.+|+|+|.|.+||..
T Consensus 17 ~~~~~~l~v~W~pP~~~~~~~~~~~~~Y~~~~~~~~~~~~~~~~~------------~~~~~~~i~~L~p~t~Y~~rVrA 84 (104)
T d3d48r2 17 EDRKPYLWIKWSPPTLIDLKTGWFTLLYEIRLKPEKAAEWEIHFA------------GQQTEFKILSLHPGQKYLVQVRC 84 (104)
T ss_dssp ----CCEEEEEECCTTCCCTTSSCCEEEEEEEEETTCSSCEEEEE------------ETCSEEEECC--CCCEEEEEEEE
T ss_pred cCCCCeEEEEEeCCccccCCCCcEEEEEeeccccccccceeeecc------------ccccEEEECCCCCCCEEEEEEEE
Confidence 445678999999864211 12 44555554433322111 11234678999999999999964
Q ss_pred -------CCceeeEEEEcC
Q 040421 79 -------GNATRQFSFTTP 90 (407)
Q Consensus 79 -------~~~s~~~~F~T~ 90 (407)
+.||+...|+||
T Consensus 85 ~n~~G~ws~wS~~~~v~tP 103 (104)
T d3d48r2 85 KPDHGYWSAWSPATFIQIP 103 (104)
T ss_dssp EESSSCCCCCCCCEEEECC
T ss_pred EeCCCCCCCCcCCEEEECc
Confidence 246778888875
|
| >d1g5ba_ d.159.1.3 (A:) lambda ser/thr protein phosphatase {Bacteriophage lambda [TaxId: 10710]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: lambda ser/thr protein phosphatase species: Bacteriophage lambda [TaxId: 10710]
Probab=96.85 E-value=0.00031 Score=59.48 Aligned_cols=65 Identities=25% Similarity=0.276 Sum_probs=40.8
Q ss_pred EEEEEecCCCCCCchh-hHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccCCeEEccCCCccc
Q 040421 100 TFGLIGDLGQTYYSNR-TLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHEID 176 (407)
Q Consensus 100 ~f~~~gD~~~~~~~~~-~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~~ 176 (407)
|++++||+|....... .++++... ...|.++++||++.... +. .+.++-+ ...-+.++.||||..
T Consensus 14 rI~vIgDIHG~~~~L~~lL~~i~~~-~~~d~lv~lGD~vDrGp----~s------~~vl~~l-~~~~~~~i~GNHE~~ 79 (219)
T d1g5ba_ 14 NIWVVGDLHGCYTNLMNKLDTIGFD-NKKDLLISVGDLVDRGA----EN------VECLELI-TFPWFRAVRGNHEQM 79 (219)
T ss_dssp CEEEECCCTTCHHHHHHHHHHHTCC-TTTCEEEECSCCSSSSS----CH------HHHHGGG-GSTTEEECCCHHHHH
T ss_pred eEEEEEecccCHHHHHHHHHHcCCC-CCCCEEEEeCCccccCc----cH------HHHHHHh-hccccccccCcHHHH
Confidence 7899999997654332 33333322 35689999999996532 11 1222222 334678899999973
|
| >d1qr4a2 b.1.2.1 (A:88-175) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=96.85 E-value=0.0016 Score=46.21 Aligned_cols=66 Identities=17% Similarity=0.172 Sum_probs=44.9
Q ss_pred eeeccCCCCCcEEEEEEcCCCC-CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 2 HITQGDHEGKGVIVSWVTPDEP-GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 2 ~l~~g~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
.|.+.+..+++++|.|..+... ..-.|+|............- . .....++|+||+|+|.|.++|..
T Consensus 6 ~l~v~~v~~~s~~l~W~~~~~~~~~Y~i~~~~~~~~~~~~~~~-----~------~~~~~~~i~~L~p~t~Y~~~V~a 72 (88)
T d1qr4a2 6 GISFSDITENSATVSWTPPRSRVDSYRVSYVPITGGTPNVVTV-----D------GSKTRTKLVKLVPGVDYNVNIIS 72 (88)
T ss_dssp CEEEESCCSSCEEEEECCCSSCCSEEEEEEEETTCCCCEEEEE-----E------TTCCEEEECSCCSSCEEEEEEEE
T ss_pred ceEEEEecCCEEEEEEEcccEeeceEEEEEEeccCCceEEEEe-----c------CCccEEEECCCCCCCEEEEEEEE
Confidence 3667777889999999876433 34577788766543322211 1 11235789999999999999965
|
| >d1owwa_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.84 E-value=0.0018 Score=46.72 Aligned_cols=74 Identities=18% Similarity=0.254 Sum_probs=46.1
Q ss_pred cCCCCCcEEEEEEcCCCC--CCCEEEEeecCCCCc-eEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc---C
Q 040421 6 GDHEGKGVIVSWVTPDEP--GSNTVLYWAENSTLK-QQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV---G 79 (407)
Q Consensus 6 g~~~~~~~~v~W~t~~~~--~~~~v~y~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~---~ 79 (407)
....+++++|+|..+... ..-.|+|...++... .... . ..-...++|+||+|||.|..+|.. .
T Consensus 11 ~~~~~~s~~vsW~~P~~~~i~~Y~i~y~~~~~~~~~~~~~-----v------~~~~~~~~l~gL~P~t~Y~v~v~av~~~ 79 (93)
T d1owwa_ 11 TPSQPNSHPIQWNAPQPSHISKYILRWRPKNSVGRWKEAT-----I------PGHLNSYTIKGLKPGVVYEGQLISIQQY 79 (93)
T ss_dssp CSSCTTCEEEEEECCSSSCEEEEEEEEEETTCSSCCEEEE-----E------CSSCCEEEECSCCSSEEEEEEEEEEESS
T ss_pred ccCCCCEEEEEeecccccceeEEEEEEeeccccceeeeec-----c------CCCccEEEECCcccCcEEEEEEEEEeCC
Confidence 333457999999986421 235778887654332 1111 1 122345789999999999999864 2
Q ss_pred Cce--eeEEEEcC
Q 040421 80 NAT--RQFSFTTP 90 (407)
Q Consensus 80 ~~s--~~~~F~T~ 90 (407)
+.+ ....|+|.
T Consensus 80 G~s~~~~~~~tT~ 92 (93)
T d1owwa_ 80 GHQEVTRFDFTTT 92 (93)
T ss_dssp SCEEEEEEEEEEC
T ss_pred CccCcEEEEEEec
Confidence 222 35677774
|
| >d1f6fb2 b.1.2.1 (B:101-203) Prolactin receptor {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Prolactin receptor species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=96.82 E-value=0.0023 Score=46.75 Aligned_cols=72 Identities=14% Similarity=0.112 Sum_probs=44.3
Q ss_pred CCCCCcEEEEEEcCCCCC--------CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 7 DHEGKGVIVSWVTPDEPG--------SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 7 ~~~~~~~~v~W~t~~~~~--------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
....++++|+|..+.... .-.|+|...+...+...... ....+.|.||.|||.|.+||..
T Consensus 17 ~~~~~~v~vsW~pP~~~~~~~~~~~l~Y~v~~~~~~~~~~~~~~~~------------~~~~~~i~~L~p~t~Y~~rVra 84 (103)
T d1f6fb2 17 KDKKTYLWVKWSPPTITDVKTGWFTMEYEIRLKPEEAEEWEIHFTG------------HQTQFKVFDLYPGQKYLVQTRC 84 (103)
T ss_dssp --CCCCEEEEEECCTTSCTTTTSSCEEEEEEEEESSCSCCEEEEEE------------TCSEEEECCCCTTCEEEEEEEE
T ss_pred ccCCCEEEEEECCCCcccCCCCcEEEEEEEEEEeCCCcceeeeccc------------ceeEEEeCCCCcceEEEEEEEE
Confidence 445678999999874321 12566666665444322211 1225788999999999999964
Q ss_pred C-------CceeeEEEEcC
Q 040421 79 G-------NATRQFSFTTP 90 (407)
Q Consensus 79 ~-------~~s~~~~F~T~ 90 (407)
. .||+.-.++||
T Consensus 85 ~~~~G~wS~wS~~~~~~~P 103 (103)
T d1f6fb2 85 KPDHGYWSRWSQESSVEMP 103 (103)
T ss_dssp EESSSCCCCCCCCEEEECC
T ss_pred EeCCCCCCCCcCceeeECc
Confidence 2 35666666553
|
| >d1tena_ b.1.2.1 (A:) Tenascin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.82 E-value=0.0034 Score=44.50 Aligned_cols=67 Identities=15% Similarity=0.199 Sum_probs=43.6
Q ss_pred eeeccCCCCCcEEEEEEcCCCC-CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 2 HITQGDHEGKGVIVSWVTPDEP-GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 2 ~l~~g~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
.|.+.+...++++|.|.-+..+ ....|.|....+....... . .. .-...++|.||+|+|.|.++|..
T Consensus 7 ~l~v~~~s~~s~~l~W~~p~~~~~~y~v~~~~~~~~~~~~~~-~---~~------~~~~~~~i~~L~p~t~Y~~~V~a 74 (90)
T d1tena_ 7 QIEVKDVTDTTALITWFKPLAEIDGIELTYGIKDVPGDRTTI-D---LT------EDENQYSIGNLKPDTEYEVSLIS 74 (90)
T ss_dssp EEEEESCCSSCEEEEEECCSSCCSEEEEEEEETTCTTCCEEE-E---EE------TTCCEEEECSCCTTCEEEEEEEE
T ss_pred CcEEEEecCCEEEEEEEeCceEeccEEEEEEEcCCCceeEEE-E---ec------CCcceeeEeeecCCCEEEEEEEE
Confidence 3556667789999999876433 3457788776543222111 1 11 12235789999999999999965
|
| >d1iarb2 b.1.2.1 (B:97-197) Interleukin-4 receptor alpha chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interleukin-4 receptor alpha chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.78 E-value=0.0021 Score=46.71 Aligned_cols=69 Identities=17% Similarity=0.263 Sum_probs=37.1
Q ss_pred eeeccCCCCCcEEEEEEcCCCCCC-------CEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEE
Q 040421 2 HITQGDHEGKGVIVSWVTPDEPGS-------NTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYY 74 (407)
Q Consensus 2 ~l~~g~~~~~~~~v~W~t~~~~~~-------~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 74 (407)
.|++....+++++|.|..+..... -.|+|....+....... .. . .......+.|.+|+|+|.|.+
T Consensus 7 ~l~v~~~~~~s~~v~W~~P~~~~~~~~~~~~y~v~y~~~~~~~~~~~~-~~---~----~~~~~~~~~i~~L~p~t~Y~~ 78 (101)
T d1iarb2 7 NLTVHTNVSDTLLLTWSNPYPPDNYLYNHLTYAVNIWSENDPADFRIY-NV---T----YLEPSLRIAASTLKSGISYRA 78 (101)
T ss_dssp EEEEC----CCEEEEEECSSCTTSTTGGGCEEEEEEEESSSCSCEEEE-EE---C----SSCCEEEECC-----CCCEEE
T ss_pred cCEEEEEeCCeEEEEEccccCCCCccceeeEEEEeeecccceeeeeee-ee---c----cCccceEEEECCCCCCCEEEE
Confidence 356666677899999998643221 36778776654432221 11 0 122345678999999999999
Q ss_pred EeCc
Q 040421 75 EVGV 78 (407)
Q Consensus 75 ~v~~ 78 (407)
||..
T Consensus 79 rVrA 82 (101)
T d1iarb2 79 RVRA 82 (101)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9964
|
| >d1tdqa1 b.1.2.1 (A:1-93) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=96.76 E-value=0.0025 Score=45.67 Aligned_cols=67 Identities=12% Similarity=0.143 Sum_probs=43.0
Q ss_pred eeeccCCCCCcEEEEEEcCCCC-CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 2 HITQGDHEGKGVIVSWVTPDEP-GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 2 ~l~~g~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
+|.+.+...++++|.|.-+... ....|.|....+...... .. . ..-...++|.||+|++.|.++|..
T Consensus 9 ~l~v~~v~~~si~v~W~~p~~~~~~y~i~~~~~~~~~~~~~-~~---~------~~~~~~~~i~~L~p~t~Y~v~V~a 76 (93)
T d1tdqa1 9 QILVRDVSDTVAFVEWTPPRAKVDFILLKYGLVGGEGGKTT-FR---L------QPPLSQYSVQALRPGSRYEVSISA 76 (93)
T ss_dssp EEEEEEECSSCEEEEEECCSSCCSEEEEEEEESSSSCCCEE-EE---E------CTTCSEEEECSCCTTCEEEEEEEE
T ss_pred CCEEEEeCCCEEEEEEEccccCCCceEEEEEeccCcceeeE-EE---e------CCCceEEEEeCcccceEEEEEEEE
Confidence 3555666778999999876543 335777877665322111 01 0 111234689999999999999965
|
| >d1x5ja1 b.1.2.1 (A:8-107) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.73 E-value=0.00097 Score=48.48 Aligned_cols=77 Identities=14% Similarity=0.093 Sum_probs=46.1
Q ss_pred eeccCCCCCcEEEEEEcCCCCC--------CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEE
Q 040421 3 ITQGDHEGKGVIVSWVTPDEPG--------SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYY 74 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~~--------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y 74 (407)
|......++++.|.|..+..+. ...|+|...+........-. .....++|.||+|+|.|.+
T Consensus 8 v~~~~~s~tsi~v~W~~p~~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~-----------~~~~~~~i~~L~p~t~Y~~ 76 (100)
T d1x5ja1 8 VQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKNAN-----------ATTLSYLVTGLKPNTLYEF 76 (100)
T ss_dssp EEEEEEETTEEEEEEECTTSCSSSCCCSSCEEEEEECBSSSSSCCCEECC-----------BCSSEEEEESCCTTCEECC
T ss_pred eEEEEecCCEEEEEEcCCccccccceeeEEEEEEEeeecCCCcceeEecC-----------CCccEEEECCCCCCCEEEE
Confidence 4455566799999998653211 12456666544322111100 1112467899999999999
Q ss_pred EeCc------CCceeeEEEEcC
Q 040421 75 EVGV------GNATRQFSFTTP 90 (407)
Q Consensus 75 ~v~~------~~~s~~~~F~T~ 90 (407)
||.. +.+|....++|.
T Consensus 77 ~V~a~n~~g~s~~S~~~~~~T~ 98 (100)
T d1x5ja1 77 SVMVTKGRRSSTWSMTAHGTTF 98 (100)
T ss_dssp EEEEECSSCBCCCCCCCCEECC
T ss_pred EEEEEeCCcCcCCCCeEEEEec
Confidence 9954 245666666664
|
| >d1ujta_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA1568 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.71 E-value=0.0021 Score=48.64 Aligned_cols=78 Identities=14% Similarity=0.150 Sum_probs=47.9
Q ss_pred CCCCcEEEEEEcCCCCC---CCEEEEeecCCCCc--eEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc----
Q 040421 8 HEGKGVIVSWVTPDEPG---SNTVLYWAENSTLK--QQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV---- 78 (407)
Q Consensus 8 ~~~~~~~v~W~t~~~~~---~~~v~y~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~---- 78 (407)
..++++.|+|.-+.... ...|.|........ ....... ........+|.||+|+|.|.+||..
T Consensus 27 ~s~tsi~v~W~~p~~~~~i~gY~v~y~~~~~~~~~~~~~~~~v--------~~~~~~s~~i~~L~p~t~Y~f~V~A~n~~ 98 (120)
T d1ujta_ 27 LTPTTVQVTWTVDRQPQFIQGYRVMYRQTSGLQATSSWQNLDA--------KVPTERSAVLVNLKKGVTYEIKVRPYFNE 98 (120)
T ss_dssp CBTTEEEEEEEESSCCSSCCEEEEEEEESSSSSTTTCCEEEEC--------CCTTCCEEEEESCCSSEEEEEEEEEESSS
T ss_pred eCCCeEEEEecCCCCCCcEEEEEEEeeecccCCCCcceEEEEe--------ccCceeEEEECCCCCCCEEEEEEEEEeCC
Confidence 35789999999764222 24677876543211 1011110 1112334678999999999999853
Q ss_pred --CCceeeEEEEcCCCC
Q 040421 79 --GNATRQFSFTTPPGV 93 (407)
Q Consensus 79 --~~~s~~~~F~T~p~~ 93 (407)
+..|....++|++..
T Consensus 99 G~G~~S~~~~~~T~e~~ 115 (120)
T d1ujta_ 99 FQGMDSESKTVRTTEES 115 (120)
T ss_dssp CCCCCCCCEEEEECSSC
T ss_pred cCcCCCCCEEEEeCCCC
Confidence 245777888898753
|
| >d1x5za1 b.1.2.1 (A:8-109) Receptor-type tyrosine-protein phosphatase delta, PTPRD {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Receptor-type tyrosine-protein phosphatase delta, PTPRD species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.67 E-value=0.001 Score=48.64 Aligned_cols=77 Identities=16% Similarity=0.331 Sum_probs=45.6
Q ss_pred eeccCCCCCcEEEEEEcCCCC--CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc--
Q 040421 3 ITQGDHEGKGVIVSWVTPDEP--GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV-- 78 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~--~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~-- 78 (407)
|.......+++.|.|..+... ..-.|+|............. ... ...+|+||+|+|.|.+||..
T Consensus 17 ~~~~~~~~~si~l~W~~p~~~~i~~Y~i~y~~~~~~~~~~~~~----------~~~--~~~~i~~L~p~t~Y~~~V~A~n 84 (102)
T d1x5za1 17 FKAEPESETSILLSWTPPRSDTIANYELVYKDGEHGEEQRITI----------EPG--TSYRLQGLKPNSLYYFRLAARS 84 (102)
T ss_dssp EEEECSSSSEEEEEEECCSCCCCCEEEECBEESSSCCCBCCEE----------CSS--SEEEEECCCTTCEEEECEEEEC
T ss_pred eEEEEccCCEEEEEEECCCCCCccceEEEEEeCCCCceEEEEc----------CCc--CEEEECCCCCCCEEEEEEEEEc
Confidence 334445578999999975321 12455666544322111110 011 13578999999999999954
Q ss_pred ----CCceeeEEEEcCC
Q 040421 79 ----GNATRQFSFTTPP 91 (407)
Q Consensus 79 ----~~~s~~~~F~T~p 91 (407)
+.+|....++|..
T Consensus 85 ~~G~g~~S~~v~~~T~e 101 (102)
T d1x5za1 85 PQGLGASTAEISARTMQ 101 (102)
T ss_dssp SSCEEEECCCEEEECCC
T ss_pred CCCEeCCCCCEEEEcCC
Confidence 1356677888864
|
| >d1x4ya1 b.1.2.1 (A:8-108) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Brother of CDO precursor (BOC) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.64 E-value=0.004 Score=45.14 Aligned_cols=80 Identities=10% Similarity=0.119 Sum_probs=47.7
Q ss_pred eeccCCCCCcEEEEEEcCCCCC------CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEe
Q 040421 3 ITQGDHEGKGVIVSWVTPDEPG------SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEV 76 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~~------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v 76 (407)
|.......++++|.|....... .-.|.|...++.......-... ..-....+|.+|+|++.|.++|
T Consensus 8 ~~~~~~s~tsi~v~W~~~~~~~~~~~i~~Y~v~y~~~~~~~~~~~~~~~~--------~~~~~~~~i~~L~p~t~Y~~~v 79 (101)
T d1x4ya1 8 TFTDAVNETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKKDMV--------EGDRYWHSISHLQPETSYDIKM 79 (101)
T ss_dssp EEEECSSSSCEEEEEECCCTTSCCCCCCEEEEEECCTTSCSGGGCCCEEE--------ETTCCEEEECSCCTTCEEEEEE
T ss_pred cEEEEEcCCEEEEEEecCcccccccceEEEEEEeeeccceeeeeeeEEEE--------cCCeeEEEEcCCCCCCEEEEEE
Confidence 3344456789999998643111 1357777655432211110000 0112245689999999999999
Q ss_pred Cc------CCceeeEEEEcC
Q 040421 77 GV------GNATRQFSFTTP 90 (407)
Q Consensus 77 ~~------~~~s~~~~F~T~ 90 (407)
.. +.+|+...++|.
T Consensus 80 ~a~n~~G~s~~S~~~~~~T~ 99 (101)
T d1x4ya1 80 QCFNEGGESEFSNVMICETK 99 (101)
T ss_dssp EEECTTCCCCCCCCEEEECC
T ss_pred EEEcCCCCCCCCCcEEEEcc
Confidence 54 357888888885
|
| >d1fnfa2 b.1.2.1 (A:1236-1326) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.64 E-value=0.0036 Score=44.37 Aligned_cols=67 Identities=15% Similarity=0.125 Sum_probs=43.3
Q ss_pred eeeccCCCCCcEEEEEEcCCCC--CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 2 HITQGDHEGKGVIVSWVTPDEP--GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 2 ~l~~g~~~~~~~~v~W~t~~~~--~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
.|.+.+...+++.|.|.-.... ..-.|+|....+....... . . ..-...++|+||+|+|.|.++|..
T Consensus 6 ~l~~~~~~~~sv~l~W~~p~~~~~~~y~v~y~~~~~~~~~~~~-~---~------~~~~~~~~i~~L~p~t~Y~~~V~a 74 (91)
T d1fnfa2 6 DLRFTNIGPDTMRVTWAPPPSIDLTNFLVRYSPVKNEEDVAEL-S---I------SPSDNAVVLTNLLPGTEYVVSVSS 74 (91)
T ss_dssp EEEEESCCSSCEEEEEECCTTCCCSEEEEEEEETTCTTCCEEE-E---E------CTTCCEEEECSCCTTCEEEEEEEE
T ss_pred ceEEEEeCCCEEEEEEEecCCCCcceeEEEEEECCCCccEEEE-E---e------CCCceEEEEeceeCCCEEEEEEEE
Confidence 3556666789999999876432 2346788776553332111 1 1 112235789999999999999965
|
| >d2cuha1 b.1.2.1 (A:8-109) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin-X species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.64 E-value=0.0092 Score=43.20 Aligned_cols=79 Identities=19% Similarity=0.210 Sum_probs=49.9
Q ss_pred eeeccCCCCCcEEEEEEcCCCC-CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCcC-
Q 040421 2 HITQGDHEGKGVIVSWVTPDEP-GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGVG- 79 (407)
Q Consensus 2 ~l~~g~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~~- 79 (407)
.|...+.+++++.|.|...... ..-.|+|...++... ... .. .-....+|+||+|||.|.++|..-
T Consensus 6 ~l~~~~~t~~si~l~W~~p~~~i~~Y~v~~~~~~~~~~-~~~-----~~------~~~~~~~l~~L~p~t~Y~~~V~a~~ 73 (102)
T d2cuha1 6 QLRALNLTEGFAVLHWKPPQNPVDTYDIQVTAPGAPPL-QAE-----TP------GSAVDYPLHDLVLHTNYTATVRGLR 73 (102)
T ss_dssp EEECCCCSSSCEEEEEECCSSCCSEEEEEEECSSSCCE-EEE-----EE------TTCSEEEECSCCSSSEEEEEEEEEE
T ss_pred ccEEEEeCCCEEEEEEEeeeccceeeEEEEEeccccce-eee-----ee------eeeeeEEEccEEeeEEEEEEEEEEe
Confidence 3566677889999999976433 346777766543221 111 11 112357899999999999999641
Q ss_pred --Cc--eeeEEEEcCCC
Q 040421 80 --NA--TRQFSFTTPPG 92 (407)
Q Consensus 80 --~~--s~~~~F~T~p~ 92 (407)
+. .....|+|.+.
T Consensus 74 ~~~~s~~~~~~~~T~~~ 90 (102)
T d2cuha1 74 GPNLTSPASITFTTGLE 90 (102)
T ss_dssp TTEECCCEEEEEESCCC
T ss_pred CCCCcCCEEEEEECCCC
Confidence 22 23457888764
|
| >d1x5ga1 b.1.2.1 (A:8-110) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.61 E-value=0.00087 Score=49.21 Aligned_cols=71 Identities=23% Similarity=0.321 Sum_probs=44.3
Q ss_pred CCCCCcEEEEEEcCCCCC----CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc----
Q 040421 7 DHEGKGVIVSWVTPDEPG----SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV---- 78 (407)
Q Consensus 7 ~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~---- 78 (407)
...++++.|+|..+.... .-.|.|...+......+... ...+.|+||+|+|.|.++|..
T Consensus 21 ~~s~~si~l~W~~P~~~~g~i~~Y~v~~~~~~~~~~~~~~~~-------------~~~~~i~~L~p~t~Y~~~V~A~n~~ 87 (103)
T d1x5ga1 21 AASPTSITVTWETPVSGNGEIQNYKLYYMEKGTDKEQDVDVS-------------SHSYTINGLKKYTEYSFRVVAYNKH 87 (103)
T ss_dssp EEETTEEEEECCCCSCCSSCCSEEEEEEEETTCCCCCCEEEC-------------SSEEEECSCCTTCEEEEEEEEECSS
T ss_pred EccCCEEEEEEECCcCCCccEEEEEEEEEeCCCceeEEEecc-------------ccEEecCCCCCCCEEEEEEEEEcCC
Confidence 335689999998654321 23567777655433222211 124578999999999999954
Q ss_pred --CCceeeEEEEcC
Q 040421 79 --GNATRQFSFTTP 90 (407)
Q Consensus 79 --~~~s~~~~F~T~ 90 (407)
+.+|....++|.
T Consensus 88 G~g~~S~~v~v~T~ 101 (103)
T d1x5ga1 88 GPGVSTPDVAVRTL 101 (103)
T ss_dssp CCCCBCCCCCEECC
T ss_pred cCcCCCCCEEEEcC
Confidence 235666667774
|
| >d1k85a_ b.1.2.1 (A:) Fibronectin type III domain from chitinase A1. {Bacillus circulans [TaxId: 1397]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type III domain from chitinase A1. species: Bacillus circulans [TaxId: 1397]
Probab=96.57 E-value=0.0035 Score=44.41 Aligned_cols=61 Identities=21% Similarity=0.306 Sum_probs=36.2
Q ss_pred eeccCCCCCcEEEEEEcCCCCCCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 3 ITQGDHEGKGVIVSWVTPDEPGSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
|+......++++|.|.-... ......|....+.. . .... . . -..+++||+|++.|.|+|..
T Consensus 10 l~~~~~~~~sv~lsW~~p~~-~~~i~~Y~i~~~~~-~--~~~~------~-~----t~~~~~~L~p~t~Y~~~V~A 70 (88)
T d1k85a_ 10 LASTAQTTSSITLSWTASTD-NVGVTGYDVYNGTA-L--ATTV------T-G----TTATISGLAADTSYTFTVKA 70 (88)
T ss_dssp EEEEEECSSCEEEEEECCSC-CSSEEEEEEEESSS-E--EEEE------S-S----SEEEECCCCSSCEEEEEEEE
T ss_pred cEEEEecCCEEEEEEeCCCC-CCCEEEEEEEccce-E--EEec------C-C----CEEEECCCCCCCEEEEEEEE
Confidence 44444467899999976532 33455565432211 1 1111 0 1 13578999999999999964
|
| >d2cuma1 b.1.2.1 (A:7-99) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin-X species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.45 E-value=0.01 Score=42.14 Aligned_cols=78 Identities=14% Similarity=0.168 Sum_probs=48.5
Q ss_pred eeeccCCCCCcEEEEEEcCCCC-CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCcC-
Q 040421 2 HITQGDHEGKGVIVSWVTPDEP-GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGVG- 79 (407)
Q Consensus 2 ~l~~g~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~~- 79 (407)
.|++.+...+++.|.|..+... ....|.|...... .... ... .....++|.||+|||.|.++|..-
T Consensus 7 ~l~~~~~~~~sv~l~W~~p~~~~~~Y~v~~~~~~~~-~~~~-----~~~------~~~~~~~i~~L~p~t~Y~~~V~a~~ 74 (93)
T d2cuma1 7 DLEAKEVTPRTALLTWTEPPVRPAGYLLSFHTPGGQ-TQEI-----LLP------GGITSHQLLGLFPSTSYNARLQAMW 74 (93)
T ss_dssp EEEEESCCSSCEEEEEECCSSCCSEEEEEEECTTSC-EEEE-----EEC------SSCSEEEECSCCTTCEEEEEEEEEB
T ss_pred CCEEEEeCCCEEEEEEEccccccccEEEEEEccccc-cEEE-----EEC------CCccEEEEeCccCCCEEEEEEEEEe
Confidence 3556666789999999987543 3467778775432 1111 111 122356899999999999999642
Q ss_pred --Cce--eeEEEEcCC
Q 040421 80 --NAT--RQFSFTTPP 91 (407)
Q Consensus 80 --~~s--~~~~F~T~p 91 (407)
+.+ ....|+|..
T Consensus 75 ~~g~s~~~~~~~tT~g 90 (93)
T d2cuma1 75 GQSLLPPVSTSFTTGG 90 (93)
T ss_dssp TTBCCCCEEEEEECCC
T ss_pred CCCCCCCEEEEEEeCC
Confidence 222 234677753
|
| >d2fnba_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.40 E-value=0.0025 Score=45.76 Aligned_cols=66 Identities=12% Similarity=0.112 Sum_probs=41.4
Q ss_pred eeccCCCCCcEEEEEEcCCCC--CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 3 ITQGDHEGKGVIVSWVTPDEP--GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~--~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
|.+.+...++++|.|.-+... ..-.|+|....+...... .. . ..-....+|+||+||+.|.++|..
T Consensus 12 l~v~~~t~~si~l~W~~p~~~~i~~Y~v~~~~~~~~~~~~~-~~---~------~~~~t~~~i~~L~p~t~Y~~~V~a 79 (95)
T d2fnba_ 12 LSFVDITDSSIGLRWTPLNSSTIIGYRITVVAAGEGIPIFE-DF---V------DSSVGYYTVTGLEPGIDYDISVIT 79 (95)
T ss_dssp CEEECCCSSCEEEECCCCCCSSCCEEEEEEEEETSCCEEEE-EE---C------CSSCSEEEECCCCTTSEEEEEEEE
T ss_pred eEEEEEcCCEEEEEEEecCCceEEeEEEEEEEeeccceEEE-EE---e------CCCCeEEEEecccCCEEEEEEEEE
Confidence 455666789999999875432 234677776554322111 11 0 112235689999999999999965
|
| >d1fnaa_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.38 E-value=0.0024 Score=45.50 Aligned_cols=66 Identities=15% Similarity=0.168 Sum_probs=42.1
Q ss_pred eeccCCCCCcEEEEEEcCCCC-CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 3 ITQGDHEGKGVIVSWVTPDEP-GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
|...+.++++++|.|..+... ....|+|....+....... . .. .-...+.|+||+||+.|.++|..
T Consensus 3 l~v~~~t~~sv~l~W~~p~~~~~~Y~v~~~~~~~~~~~~~~-~---~~------~~~t~~~l~~L~p~t~Y~~~V~a 69 (91)
T d1fnaa_ 3 LEVVAATPTSLLISWDAPAVTVRYYRITYGETGGNSPVQEF-T---VP------GSKSTATISGLKPGVDYTITVYA 69 (91)
T ss_dssp CEEEEECSSCEEEECCCCSSCCSEEEEEEEETTCCSCCEEE-E---EE------TTCCEEEECSCCTTCEEEEEEEE
T ss_pred CEEEEeCCCEEEEEEEccceEecEEEEEEEcCCCCceeEEE-E---eC------CCccEEEeCCCCCCCEEEEEEEE
Confidence 444555678999999876433 3457778776543322111 1 11 11235789999999999999964
|
| >d1wk0a_ b.1.2.1 (A:) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.37 E-value=0.0031 Score=48.70 Aligned_cols=33 Identities=27% Similarity=0.311 Sum_probs=26.5
Q ss_pred EEEEcCCCCCCEEEEEeCc------CCceeeEEEEcCCC
Q 040421 60 HCTIEDLEFDTKYYYEVGV------GNATRQFSFTTPPG 92 (407)
Q Consensus 60 ~~~l~gL~p~t~Y~Y~v~~------~~~s~~~~F~T~p~ 92 (407)
.++|+||+|+|.|.++|.. +.+|+...|+|++.
T Consensus 83 ~~~i~~L~P~t~Y~f~V~A~n~~G~g~~S~~~~~~T~~~ 121 (137)
T d1wk0a_ 83 NITLNDLKPAMDYHAKVQAEYNSIKGTPSEAEIFTTLSC 121 (137)
T ss_dssp EEEECSCCTTCEECEEEEEEETTEECCCCCCCCEECCCS
T ss_pred EEEECCCCCCcEEEEEEEEEcCCcccCCCCCEEEECCCC
Confidence 5789999999999999964 24677778999754
|
| >d1fnha1 b.1.2.1 (A:3-92) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.35 E-value=0.0056 Score=43.20 Aligned_cols=66 Identities=14% Similarity=0.088 Sum_probs=41.2
Q ss_pred eeccCCCCCcEEEEEEcCCCCC-CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 3 ITQGDHEGKGVIVSWVTPDEPG-SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~~-~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
|.+.+...++++|.|.-+.... ...+.|............ .. ..-....+|+||+|||.|.++|..
T Consensus 6 l~~~~v~~~si~l~W~~p~~~~~~~~i~~~~~~~~~~~~~~-~~---------~~~~~~~~i~~L~p~t~Y~~~V~a 72 (90)
T d1fnha1 6 LKFTQVTPTSLSAQWTPPNVQLTGYRVRVTPKEKTGPMKEI-NL---------APDSSSVVVSGLMVATKYEVSVYA 72 (90)
T ss_dssp EEEEEECSSCEEEEEECCSSCCSEEEEEEEESSSCSCCCEE-EE---------CTTCCEEEECSCCTTCEEEEEEEE
T ss_pred EEEEEecCCEEEEEEEccceeccceEEEEEeeeCCCceEEE-Ee---------CCCCeEEEEecccCceEEEEEEEE
Confidence 4555566789999999875332 356667665432221111 10 011124789999999999999965
|
| >d2gysa2 b.1.2.1 (A:104-217) Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.29 E-value=0.0064 Score=45.06 Aligned_cols=75 Identities=15% Similarity=0.233 Sum_probs=46.9
Q ss_pred CCCcEEEEEEcCCCCC----------CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 9 EGKGVIVSWVTPDEPG----------SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 9 ~~~~~~v~W~t~~~~~----------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
..+++.|+|..+.... ...|+|.............. .......+.+.+|.|+|.|..||..
T Consensus 17 ~~~~~~lsW~~P~~~~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~L~p~t~Y~~rVRa 87 (114)
T d2gysa2 17 DQDHFLLTWSVALGSPQSHWLSPGDLEFEVVYKRLQDSWEDAAILL---------SNTSQATLGPEHLMPSSTYVARVRT 87 (114)
T ss_dssp ETTEEEEEEECCC-----CCSCGGGEEEEEEEEETTSCSTTCEEEE---------ESSSEEEECTTTCCTTCEEEEEEEE
T ss_pred eCCEEEEECCCCcccccccceeeeEEEEEEEEeccCCceEEEEEee---------ccCceEEEEeCCCCCCcEEEEEEEE
Confidence 3568999999874221 12566777654322211111 0122346788999999999999954
Q ss_pred ----C--------CceeeEEEEcCCC
Q 040421 79 ----G--------NATRQFSFTTPPG 92 (407)
Q Consensus 79 ----~--------~~s~~~~F~T~p~ 92 (407)
+ .||+...|+|+|.
T Consensus 88 ~~~~g~~~~g~wS~WS~~v~~~t~pg 113 (114)
T d2gysa2 88 RLAPGSRLSGRPSKWSPEVCWDSQPG 113 (114)
T ss_dssp EECTTSSCCBCCCCCCCCEEEECCCC
T ss_pred EeCCCCCCCCCccCCcCCEeeeCcCC
Confidence 1 4678889999763
|
| >d1qr4a1 b.1.2.1 (A:1-87) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Chicken (Gallus gallus) [TaxId: 9031]
Probab=96.28 E-value=0.011 Score=41.48 Aligned_cols=64 Identities=11% Similarity=0.166 Sum_probs=42.4
Q ss_pred eeccCCCCCcEEEEEEcCCCC-CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 3 ITQGDHEGKGVIVSWVTPDEP-GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
|.+...+.+++.|.|.-+... ....|.|........ .. ... .-....+|+||+|++.|.++|..
T Consensus 6 l~v~~~t~~sv~v~W~~p~~~~~~Y~v~~~~~~~~~~-~~-----~~~------~~~~~~~~~~L~p~t~Y~v~V~a 70 (87)
T d1qr4a1 6 LEVSDPTETTLSLRWRRPVAKFDRYRLTYVSPSGKKN-EM-----EIP------VDSTSFILRGLDAGTEYTISLVA 70 (87)
T ss_dssp EEEESCCSSEEEEEEECCSSCCSEEEEEEECTTCCEE-EE-----EEC------TTCSEEEEESCCSSCEEEEEEEE
T ss_pred cEEEEecCCEEEEEEECCCCCcceeEEEeecCCccee-EE-----eCC------CCcCEEEECCCCcCCEEEEEEEE
Confidence 556667789999999986543 345777877553211 11 111 11235789999999999999964
|
| >d1wfua_ b.1.2.1 (A:) Fibronectin type 3 and ankyrin repeat domains 1 protein, FANK1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type 3 and ankyrin repeat domains 1 protein, FANK1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.22 E-value=0.002 Score=48.61 Aligned_cols=79 Identities=15% Similarity=0.214 Sum_probs=45.2
Q ss_pred cCCCCCcEEEEEEcCCCC-----CCCEEEEeecCCC-CceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCcC
Q 040421 6 GDHEGKGVIVSWVTPDEP-----GSNTVLYWAENST-LKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGVG 79 (407)
Q Consensus 6 g~~~~~~~~v~W~t~~~~-----~~~~v~y~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~~ 79 (407)
.....++++|.|..+... ....|+|...... ...... .. +. ......+|++|+|+|.|.+||..-
T Consensus 25 ~~vt~~sv~l~W~~P~~~~g~~i~~y~i~y~~~~~~~~~~~~~-~~--~~------~~~~~~~v~~L~p~t~Y~frV~A~ 95 (120)
T d1wfua_ 25 GKVTHHSIELYWDLEQKEKRQGPQEQWLRFSIEEEDPKMHSYG-VI--YT------GYATRHVVEGLEPRTLYKFRLKVT 95 (120)
T ss_dssp CCEETTEEEEECTTTSCSCCCSCGGGCCEEEEEEECTTTCCEE-EE--EE------ESCSEEEEESCCTTCEEEEEEEEE
T ss_pred eEecCCEEEEEEECCcccCcccccceeeeeeeeccccccccee-ee--cc------ccccEEeCCCCCCCcEeeEEEEEE
Confidence 344568999999875322 1234666542111 111110 00 00 011235789999999999999652
Q ss_pred ------CceeeEEEEcCCCC
Q 040421 80 ------NATRQFSFTTPPGV 93 (407)
Q Consensus 80 ------~~s~~~~F~T~p~~ 93 (407)
.+|+...++|.+..
T Consensus 96 n~~G~s~~S~~~~~~T~~~~ 115 (120)
T d1wfua_ 96 SPSGEYEYSPVVSVATTRES 115 (120)
T ss_dssp CSSSCEEECCCEEEECCCCC
T ss_pred eCCcEeCCCCCEEEEeCCCC
Confidence 35677888887543
|
| >d1fnha2 b.1.2.1 (A:93-182) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.20 E-value=0.0094 Score=42.09 Aligned_cols=65 Identities=20% Similarity=0.142 Sum_probs=41.4
Q ss_pred eeccCCCCCcEEEEEEcCCCC-CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 3 ITQGDHEGKGVIVSWVTPDEP-GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
|.+.....++++|.|.-+... ..-.|+|....+....... . ..-.....|.+|+|||.|.++|..
T Consensus 8 l~v~~~~~~si~v~W~~p~~~~~~Y~i~~~~~~~~~~~~~~-----~------~~~~~~~~i~~L~p~t~Y~~~V~a 73 (90)
T d1fnha2 8 ARVTDATETTITISWRTKTETITGFQVDAVPANGQTPIQRT-----I------KPDVRSYTITGLQPGTDYKIYLYT 73 (90)
T ss_dssp EEEEEECSSEEEEEEECCSSCCCCEEEEEEESSSSCCEEEE-----C------CTTCSEEEEESCCTTCEEEEEEEE
T ss_pred CEEEEecCCEEEEEEECCCCCCceeEEEEEEccCCceEEEe-----c------CCCccEEEeCCCCCCcEEEEEEEE
Confidence 444455678999999965433 3457777776543222111 0 111235688999999999999965
|
| >d1erna2 b.1.2.1 (A:117-221) Erythropoietin (EPO) receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Erythropoietin (EPO) receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.19 E-value=0.015 Score=42.26 Aligned_cols=71 Identities=24% Similarity=0.340 Sum_probs=41.9
Q ss_pred CCcEEEEEEcCCCCC-C----CEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc------
Q 040421 10 GKGVIVSWVTPDEPG-S----NTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV------ 78 (407)
Q Consensus 10 ~~~~~v~W~t~~~~~-~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~------ 78 (407)
++++.|.|..+.... . -.|+|............. .. .. ...+.|.+|+|+|.|.+||..
T Consensus 19 ~~~l~v~W~~P~~~~~~~~~~Y~v~y~~~~~~~~~~~~~----~~----~~--~t~~~i~~L~p~t~Y~~rVRar~~~~~ 88 (105)
T d1erna2 19 SGHVVLRWLPPPETPMTSHIRYEVDVSAGNGAGSVQRVE----IL----EG--RTECVLSNLRGRTRYTFAVRARMAEPS 88 (105)
T ss_dssp -CCEEEEEECSSSCSCGGGEEEEEEEEEC-CCCEEEEEE----EC----TT--CCEEEECSCCSSCEEEEEEEEEECSSS
T ss_pred CCcEEEEeeeccccccceEEEEEEEEecCCCCCceEEEe----ec----CC--ccEEEEeCCCCCcEEEEEEEEEECCCC
Confidence 467999999764221 1 367777665422211111 00 11 134678999999999999954
Q ss_pred --C---CceeeEEEEcC
Q 040421 79 --G---NATRQFSFTTP 90 (407)
Q Consensus 79 --~---~~s~~~~F~T~ 90 (407)
| .||....++||
T Consensus 89 ~~G~WSeWS~~v~~~tP 105 (105)
T d1erna2 89 FGGFWSAWSEPVSLLTP 105 (105)
T ss_dssp CCBCCCCCCCCEEEECC
T ss_pred CCCCCCCCCCCEEeeCc
Confidence 1 35677777774
|
| >d2ic2a1 b.1.2.1 (A:466-572) Hedgehog receptor iHog {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Hedgehog receptor iHog species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=96.19 E-value=0.013 Score=42.82 Aligned_cols=73 Identities=15% Similarity=0.219 Sum_probs=39.4
Q ss_pred cCCCCCcEEEEEEcCCCCCCC----EEEEeecCCC-CceEEEEEEEEEEe-cCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 6 GDHEGKGVIVSWVTPDEPGSN----TVLYWAENST-LKQQAHGIVLTYNY-FNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 6 g~~~~~~~~v~W~t~~~~~~~----~v~y~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
.+...++++|.|.-+...+.. .|+|...... .+............ ...........+|+||+|+|.|.+||..
T Consensus 9 ~~~~~~sv~l~W~~P~~~g~~I~~Y~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~frV~A 87 (107)
T d2ic2a1 9 TRLSDESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPKWNSELGKSFTASVTDLKPQHTYRFRILA 87 (107)
T ss_dssp EECC---EEEEEEEECCSSCCEEEEEEEEEECC---CCEEEEEEEECCSCSCSSSSEEEEEEEECSCCSSEEEEEEEEE
T ss_pred EEEECCEEEEEEEeCccccCCceEEEEEEEeccCCCcceEEEeeeeccceeeeecccceeEEEECCCcCCcEEEEEEEE
Confidence 344678999999987543333 4556554432 22222221110000 1122344567889999999999999975
|
| >d1wf5a1 b.1.2.1 (A:8-115) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.02 E-value=0.0039 Score=45.99 Aligned_cols=66 Identities=14% Similarity=0.158 Sum_probs=38.7
Q ss_pred eeccCCCCCcEEEEEEcCCCCCC----CEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 3 ITQGDHEGKGVIVSWVTPDEPGS----NTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
+.+.....+++.|.|..+...+. -.|+|...+.. +...... .......++|+||+|++.|.+||..
T Consensus 19 ~~~~~~~~~sv~l~W~~P~~~~~~I~~Y~v~~~~~~~~-~~~~~~~---------~~~~~~~~~i~~L~p~t~Y~frV~A 88 (108)
T d1wf5a1 19 ATLSTVERRAINLTWTKPFDGNSPLIRYILEMSENNAP-WTVLLAS---------VDPKATSVTVKGLVPARSYQFRLCA 88 (108)
T ss_dssp EEECSSSTTEEEEECCCCCCCSSCEEEEEEEEECTTCC-CEEEESS---------CCTTCCEEEEESCCTTCEEEEEEEE
T ss_pred EEEEeccCCEEEEEEECCCCCCCccEEEEEEEEeccCC-ceEEeee---------ecCCccEEEECCCCCCCEEEEEEEE
Confidence 34445566799999987643322 34556554432 1111110 1111234678999999999999965
|
| >d2z06a1 d.159.1.10 (A:1-252) Hypothetical protein TTHA0625 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: TTHA0625-like domain: Hypothetical protein TTHA0625 species: Thermus thermophilus [TaxId: 274]
Probab=95.99 E-value=0.04 Score=46.35 Aligned_cols=190 Identities=14% Similarity=0.199 Sum_probs=100.2
Q ss_pred cEEEEEecCCCCCCc---hhhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccCCeEEccCCCcc
Q 040421 99 YTFGLIGDLGQTYYS---NRTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHEI 175 (407)
Q Consensus 99 ~~f~~~gD~~~~~~~---~~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~ 175 (407)
+||+++||.=..... ...|.++.+ +.||||..|.++-. |. .-..+..++ +++ ..+- ..+.|||=|
T Consensus 1 MkiLfiGDIvG~~Gr~~v~~~Lp~Lk~---~~DfVIaNgENaa~-G~-Git~k~~~~---L~~---~GVD-vIT~GNH~w 68 (252)
T d2z06a1 1 MRVLFIGDVMAEPGLRAVGLHLPDIRD---RYDLVIANGENAAR-GK-GLDRRSYRL---LRE---AGVD-LVSLGNHAW 68 (252)
T ss_dssp CEEEEECCBCHHHHHHHHHHHHHHHGG---GCSEEEEECTTTTT-TS-SCCHHHHHH---HHH---HTCC-EEECCTTTT
T ss_pred CeEEEEeccCCHHHHHHHHHHhHHHHh---hCCEEEEeeeccCC-Cc-CCCHHHHHH---HHH---hCCC-EEEcCcccc
Confidence 589999998533211 122334433 57999999999853 32 122222222 222 2334 448999998
Q ss_pred ccCCCCCCcccccccccccccCCCCC-CCCCCeEEEEecCcEEEEEEecccc--CCCChHHHHHHHHhccccCCCCCCeE
Q 040421 176 DFAPQLGEAIPFKPFANRFHLPYRAP-YSTAPFWYSIRRASAHIIVMSCYSA--FGKYTPQYKWLEKEFPKVNRSETPWL 252 (407)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~f~~P~~~~-~~~~~~~ysf~~g~v~fi~Lds~~~--~~~~~~Q~~WL~~~L~~~~~~~~~~~ 252 (407)
... +...|... ++.--|.|-+ +..+..|+.|+.++.++.+++-... ....+.-+.-+++.|++ .+.+.+
T Consensus 69 dkk----ei~~~i~~-~~llRP~N~p~~~PG~G~~i~~~~g~ki~ViNl~Gr~fm~~~d~PF~~~d~~~~~---~~~~~i 140 (252)
T d2z06a1 69 DHK----EVYALLES-EPVVRPLNYPPGTPGKGFWRLEVGGESLLFVQVMGRIFMDPLDDPFRALDRLLEE---EKADYV 140 (252)
T ss_dssp SCT----THHHHHHH-SSEECCTTSCSSCSSCSEEEEEETTEEEEEEEEECCTTSCCCCCHHHHHHHHHHH---CCCSEE
T ss_pred cch----hhhhhhcc-ccccchhhccCCCCCCcEEEEccCCceEEEEEecccccCCCCCCHHHHHHHHHhh---cCccEE
Confidence 521 11111111 1222344422 2234557778888877777765221 11222223334444443 345688
Q ss_pred EEEeeccccccCCCCCCCChhHHHHHHHHHHhCCCcEEEeccccccccccccccceeeccCCcccccCCCCCceEEE-eC
Q 040421 253 IVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAYERSERMSNIAYNVTNALCSPVSDQSAPVYIT-IG 331 (407)
Q Consensus 253 iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~r~~~~~~~~~~~~~g~~~~~~~~~g~~~iv-~G 331 (407)
||=+|.=. .....+| -.+-.-+|.+|+.=|+|.-..-..+ -++|+-|++ .|
T Consensus 141 ~VDfHaEa-----------TSEK~A~-g~~ldGrvsavvGTHTHV~TaD~rI----------------Lp~GTayiTDvG 192 (252)
T d2z06a1 141 LVEVHAEA-----------TSEKMAL-AHYLDGRASAVLGTHTHVPTLDATR----------------LPKGTLYQTDVG 192 (252)
T ss_dssp EEEEECSC-----------HHHHHHH-HHHHBTTBSEEEEESSCSCBSCCEE----------------CTTSCEEESCCC
T ss_pred EEEcccch-----------hhhheee-eEecCCCEEEEEecCccccccccEE----------------ecCCeEEEccCc
Confidence 99888532 1222233 3444668999999999974322221 246777886 55
Q ss_pred CCCCC
Q 040421 332 DGGNQ 336 (407)
Q Consensus 332 ~gG~~ 336 (407)
.-|..
T Consensus 193 M~G~~ 197 (252)
T d2z06a1 193 MTGTY 197 (252)
T ss_dssp CBEES
T ss_pred cccch
Confidence 55554
|
| >d2b5ic1 b.1.2.1 (C:130-224) Cytokine receptor common gamma chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Cytokine receptor common gamma chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.97 E-value=0.0048 Score=44.37 Aligned_cols=64 Identities=11% Similarity=0.170 Sum_probs=42.3
Q ss_pred eeccCCCCCcEEEEEEcCCCC--CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 3 ITQGDHEGKGVIVSWVTPDEP--GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~--~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
|++-..+.+++.|.|..+... -.-.|+|....+....... . ......+|.+|.|+|.|.+||..
T Consensus 9 l~v~~~~~~~v~l~W~~p~~~~~~~y~v~y~~~~~~~~~~~~-~-----------~~~~~~~~~~L~p~t~Y~frVRa 74 (95)
T d2b5ic1 9 LTLHKLSESQLELNWNNRFLNHCLEHLVQYRTDWDHSWTEQS-V-----------DYRHKFSLPSVDGQKRYTFRVRS 74 (95)
T ss_dssp EEEEEEETTEEEEEEECSSCSTTCEEEEEEEETTCSSCEEEE-E-----------CSSCEEEECSCCTTSCEEEEEEE
T ss_pred CEEEEEeCCEEEEEECCCCCceeEEEEEEEEcCCCceeeEee-e-----------cccceeEcCCCCCCCEEEEEEEE
Confidence 444444568999999986432 2357888877654433221 1 11235788999999999999965
|
| >d1t71a_ d.159.1.9 (A:) Hypothetical protein MPN349 {Mycoplasma pneumoniae [TaxId: 2104]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DR1281-like domain: Hypothetical protein MPN349 species: Mycoplasma pneumoniae [TaxId: 2104]
Probab=95.96 E-value=0.061 Score=46.02 Aligned_cols=174 Identities=15% Similarity=0.080 Sum_probs=92.7
Q ss_pred CCcEEEEEecCCCCCC---chhhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccCCeEEccCCC
Q 040421 97 VPYTFGLIGDLGQTYY---SNRTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNH 173 (407)
Q Consensus 97 ~~~~f~~~gD~~~~~~---~~~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNH 173 (407)
..+||+++||.=.... -.+.|..+.++ .++||||..|.++.. |. .-.... +.++++ ..+- ..+.|||
T Consensus 3 ~~MkILfiGDIvG~~GR~~v~~~Lp~Lr~~-~~iDfVIaNgENaa~-G~-Git~k~---~~eL~~---~GvD-vIT~GNH 72 (281)
T d1t71a_ 3 NSIKFIFLGDVYGKAGRNIIKNNLAQLKSK-YQADLVIVNAENTTH-GK-GLSLKH---YEFLKE---AGVN-YITMGNH 72 (281)
T ss_dssp CCCEEEEECEEBHHHHHHHHHTTHHHHHHH-HTCSEEEEECTBTTT-TS-SCCHHH---HHHHHH---HTCC-EEECCTT
T ss_pred ccceEEEEEccCCHHHHHHHHHHhHHHHHH-hCCCEEEECCccCCC-Cc-CCCHHH---HHHHHH---hCCc-EEEcCch
Confidence 4789999999743321 12334455555 389999999999853 22 112222 222222 2344 4489999
Q ss_pred ccccCCCCCCcccccccccccccCCCC----C-CCCCCeEEEEecCcEEEEEEecccc-C-C--CChHHHHHHHHhcccc
Q 040421 174 EIDFAPQLGEAIPFKPFANRFHLPYRA----P-YSTAPFWYSIRRASAHIIVMSCYSA-F-G--KYTPQYKWLEKEFPKV 244 (407)
Q Consensus 174 D~~~~~~~~~~~~~~~~~~~f~~P~~~----~-~~~~~~~ysf~~g~v~fi~Lds~~~-~-~--~~~~Q~~WL~~~L~~~ 244 (407)
=|... +...|-.-..+.--|.|- + +..+..|..++.++.++.+++-... + . .......-+++.+..
T Consensus 73 ~wd~k----ei~~~i~~~~~llRP~N~p~~~p~~~pG~G~~i~~~~~~~i~Vinl~G~~fm~~~~~~~pf~~~~~~~~~- 147 (281)
T d1t71a_ 73 TWFQK----LDLAVVINKKDLVRPLNLDTSFAFHNLGQGSLVFEFNKAKIRITNLLGTSVPLPFKTTNPFKVLKELILK- 147 (281)
T ss_dssp TTCCG----GGHHHHTTCTTEECBSCBCTTSTTTTSSBSEEEEECSSCEEEEEEEECTTSCCSSCBCCHHHHHHHHHTT-
T ss_pred hhhch----hhHHHHhhcccccccccccccccCCCCCceEEEEEccccceeeeeeccccccccccccHHHHHHHHhhcc-
Confidence 87421 111111111122223331 1 2234557788877766666665321 1 1 112233444444443
Q ss_pred CCCCCCeEEEEeeccccccCCCCCCCChhHHHHHHHHHHhCCCcEEEeccccccc
Q 040421 245 NRSETPWLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAYE 299 (407)
Q Consensus 245 ~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~ 299 (407)
.+.+.+||=+|.=. .....+| -.+-+-+|.+|+.=|+|.-.
T Consensus 148 --~~~d~i~VDfHaEA-----------TSEK~A~-g~~lDGrvsaVvGTHTHV~T 188 (281)
T d1t71a_ 148 --RDCDLHIVDFHAET-----------TSEKNAF-CMAFDGYVTTIFGTHTHVPS 188 (281)
T ss_dssp --CCCSEEEEEEECSC-----------HHHHHHH-HHHHTTTSSEEEEESSSSCC
T ss_pred --cCCCeEEEEeccch-----------hhhhhhh-eeeeCCcEEEEEecCccccc
Confidence 45668999899532 1222233 34446789999999999743
|
| >d1tdqa3 b.1.2.1 (A:186-271) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=95.96 E-value=0.01 Score=41.52 Aligned_cols=64 Identities=13% Similarity=0.213 Sum_probs=41.4
Q ss_pred eeccCCCCCcEEEEEEcCCCCC-CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 3 ITQGDHEGKGVIVSWVTPDEPG-SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~~-~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
|.+.....++++|.|.-+...- ...|+|........ ... . . .-...+.|+||+|||.|.++|..
T Consensus 7 l~v~~~~~~s~~l~W~~p~~~~~~Y~v~~~~~~~~~~-~~~--~---~------~~~~~~~~~~L~p~t~Y~v~V~a 71 (86)
T d1tdqa3 7 LMVTASSETSISLIWTKASGPIDHYRITFTPSSGISS-EVT--V---P------RDRTSYTLTDLEPGAEYIISITA 71 (86)
T ss_dssp EEEEEECSSCEEEEEECCCSCCSEEEEEEECSSSCCE-EEE--E---E------SSCSEEEECCCCTTCCEEEEEEE
T ss_pred CEEEEecCCEEEEEEeCCCCCccceEEEEecccccce-EEE--e---C------CCccEEEECCCccccEEEEEEEE
Confidence 4444556789999998875432 35777876554221 111 0 1 11235789999999999999965
|
| >d1x5ya1 b.1.2.1 (A:8-105) Myosin binding protein C, fast-type {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Myosin binding protein C, fast-type species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.96 E-value=0.0023 Score=46.42 Aligned_cols=66 Identities=21% Similarity=0.199 Sum_probs=41.5
Q ss_pred eeccCCCCCcEEEEEEcCCCC-----CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeC
Q 040421 3 ITQGDHEGKGVIVSWVTPDEP-----GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVG 77 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~-----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~ 77 (407)
|++.+...++++|.|.-+... ..-.|+|...++..+..+. ........++|+||+||+.|.+||.
T Consensus 8 ~~v~~~~~~sv~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~~~~~~----------~~~~~~~~~~v~~L~~~~~Y~frV~ 77 (98)
T d1x5ya1 8 LTVEDVTDTTTTLKWRPPDRIGAGGIDGYLVEYCLEGSEEWVPAN----------KEPVERCGFTVKDLPTGARILFRVV 77 (98)
T ss_dssp EEEEEECSSEEEEEEECCSCCCSSCCCEEEEEEEETTCCCCEESS----------SSCBSSSEEEEECCCTTCCEEEEEE
T ss_pred cEEEEccCCEEEEEEECCCcCCCCCceEEEEEEEecCcceeEEee----------eecCceeEEEECCCcCCeEEEEEEE
Confidence 455555678999999865322 2256777776654332211 0111123467899999999999997
Q ss_pred c
Q 040421 78 V 78 (407)
Q Consensus 78 ~ 78 (407)
.
T Consensus 78 A 78 (98)
T d1x5ya1 78 G 78 (98)
T ss_dssp E
T ss_pred E
Confidence 6
|
| >d1x3da1 b.1.2.1 (A:8-112) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.94 E-value=0.0085 Score=43.72 Aligned_cols=72 Identities=10% Similarity=0.163 Sum_probs=42.7
Q ss_pred CCCCcEEEEEEcCCCCCCCEEEE----eecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc-----
Q 040421 8 HEGKGVIVSWVTPDEPGSNTVLY----WAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV----- 78 (407)
Q Consensus 8 ~~~~~~~v~W~t~~~~~~~~v~y----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~----- 78 (407)
...++++|.|.-+.........| .............. .......+.+|+|++.|.+||..
T Consensus 22 ~~~~sv~l~W~pp~~~~~~i~~Y~i~~~~~~~~~~~~~~~~-----------~~~~~~~~~~L~p~t~Y~frV~A~N~~G 90 (105)
T d1x3da1 22 RTKNSLTLQWKAPSDNGSKIQNFVLEWDEGKGNGEFCQCYM-----------GSQKQFKITKLSPAMGCKFRLSARNDYG 90 (105)
T ss_dssp EETTEEEEECCCCCCCSSCEEEEEEEECTTTSSSCCEEEEE-----------ESCSEEEEESCCTTCEEEEECCEEESSC
T ss_pred ccCCEEEEEEECCCCCcCccEEEEEEEecCCCcceeEEEec-----------CCccEEEecCCcCCcEEEEEEEEECCCe
Confidence 35678999998765433343333 33322221111111 11224577899999999999964
Q ss_pred -CCceeeEEEEcC
Q 040421 79 -GNATRQFSFTTP 90 (407)
Q Consensus 79 -~~~s~~~~F~T~ 90 (407)
+.+|+...|+|.
T Consensus 91 ~s~~S~~~~~~T~ 103 (105)
T d1x3da1 91 TSGFSEEVLYYTS 103 (105)
T ss_dssp BCCCCCCEEEECS
T ss_pred EcCCCCcEEEECC
Confidence 346777788774
|
| >d1t70a_ d.159.1.9 (A:) Putative phosphatase DR1281 {Deinococcus radiodurans [TaxId: 1299]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: DR1281-like domain: Putative phosphatase DR1281 species: Deinococcus radiodurans [TaxId: 1299]
Probab=95.93 E-value=0.075 Score=44.81 Aligned_cols=170 Identities=14% Similarity=0.135 Sum_probs=91.9
Q ss_pred cEEEEEecCCCCCCc---hhhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHhhhhccCCeEEccCCCcc
Q 040421 99 YTFGLIGDLGQTYYS---NRTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIERNAAYQPWIWTVGNHEI 175 (407)
Q Consensus 99 ~~f~~~gD~~~~~~~---~~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~GNHD~ 175 (407)
+||+++||.=..... .+.|..+.+ +.||||..|.++-. |. .-..... .++++ ..+- ..+.|||=|
T Consensus 1 MkILfiGDIvG~~Gr~~v~~~Lp~lk~---~~DfVIaNgENaa~-G~-Git~~~~---~~l~~---~GvD-viT~GNH~w 68 (255)
T d1t70a_ 1 MRVLFIGDVFGQPGRRVLQNHLPTIRP---QFDFVIVNMENSAG-GF-GMHRDAA---RGALE---AGAG-CLTLGNHAW 68 (255)
T ss_dssp CEEEEECCBBHHHHHHHHHHHHHHHGG---GCSEEEEECTBTTT-TS-SCCHHHH---HHHHH---HTCS-EEECCTTTT
T ss_pred CeEEEEecCCCHHHHHHHHHHhHHHHh---hCCEEEECCccCCC-Cc-CCCHHHH---HHHHH---cCCc-EEEcCchhh
Confidence 589999997433211 122334433 57999999999854 32 1122222 23322 2344 348999988
Q ss_pred ccCCCCCCccccc-ccccccccCCCCC--CCCCCeEEEEecCcEEEEEEeccc--cCCCChHHHHHHHHhccccCCCCCC
Q 040421 176 DFAPQLGEAIPFK-PFANRFHLPYRAP--YSTAPFWYSIRRASAHIIVMSCYS--AFGKYTPQYKWLEKEFPKVNRSETP 250 (407)
Q Consensus 176 ~~~~~~~~~~~~~-~~~~~f~~P~~~~--~~~~~~~ysf~~g~v~fi~Lds~~--~~~~~~~Q~~WL~~~L~~~~~~~~~ 250 (407)
... +...|- ....+.--|.|-+ ...+..|+.++..+.++.+++-.. -....+.-+.-+++.|++ .+.+
T Consensus 69 dkk----ei~~~i~~~~~~ilRP~N~p~~~~PG~G~~i~~~~g~ki~ViNl~Gr~fM~~~d~PF~~~d~~l~~---~~~~ 141 (255)
T d1t70a_ 69 HHK----DIYPMLSEDTYPIVRPLNYADPGTPGVGWRTFDVNGEKLTVVNLLGRVFMEAVDNPFRTMDALLER---DDLG 141 (255)
T ss_dssp SST----THHHHHHTTCSCEECCSCCCCTTCSSCSEEEEECSSSEEEEEEEECCTTSCCCSCHHHHHHHHTTC---SSCC
T ss_pred cch----hHHHHHhhcchhhhhhhccCCCCCCCceEEEEeeccCcEEEEEeccccccCcccCHHHHHHHHHhh---cCCC
Confidence 521 111111 0111222343321 233556777887776777766422 112223345556677765 3456
Q ss_pred eEEEEeeccccccCCCCCCCChhHHHHHHHHHHhCCCcEEEeccccccc
Q 040421 251 WLIVLMHCPLYNSYVHHYMEGEPMRVLYEPWFVEYKVDVVFAAHVHAYE 299 (407)
Q Consensus 251 ~~iv~~H~P~~~~~~~~~~~~~~~~~~l~~l~~~~~vdlvl~GH~H~y~ 299 (407)
.+||=+|.=. .....+| -.+-+-+|.+|+.=|+|.-.
T Consensus 142 ~i~VDfHaEa-----------TSEK~A~-g~~ldGrvsav~GTHTHV~T 178 (255)
T d1t70a_ 142 TVFVDFHAEA-----------TSEKEAM-GWHLAGRVAAVIGTHTHVPT 178 (255)
T ss_dssp EEEEEEECSC-----------HHHHHHH-HHHHTTSSSEEEEESSCSCB
T ss_pred eEEEEccchh-----------HHHHHHH-HhhhcCcEEEEEecCccccc
Confidence 7899888532 2222233 33446689999999999743
|
| >d1fnfa1 b.1.2.1 (A:1142-1235) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.92 E-value=0.011 Score=42.24 Aligned_cols=59 Identities=17% Similarity=0.221 Sum_probs=37.0
Q ss_pred CcEEEEEEcCCCC--CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 11 KGVIVSWVTPDEP--GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 11 ~~~~v~W~t~~~~--~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
++++|.|.-...+ ..-.|.|....+.......-. . ..-...++|+||+|||.|..+|..
T Consensus 17 s~i~v~W~~p~~~~i~~Y~v~y~~~~~~~~~~~~~~---~------~~~~~~~~i~~L~p~t~Y~v~V~a 77 (94)
T d1fnfa1 17 GVLTVSWERSTTPDITGYRITTTPTNGQQGNSLEEV---V------HADQSSCTFDNLSPGLEYNVSVYT 77 (94)
T ss_dssp SCEEEEEECCSCSSCCEEEEEEEETTTCSSCCEEEE---E------CTTCCEEECCCCCTTSCEEEEEEE
T ss_pred CEEEEEeeCCCCCCeeEEEEEEEEecccCceEEEEE---e------CCCccEEEECCCCCCCEEEEEEEE
Confidence 4589999876432 235677887654332211111 1 112346889999999999999965
|
| >d1va9a1 b.1.2.1 (A:8-116) Down syndrome cell adhesion molecule-like protein 1, DSCAML1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Down syndrome cell adhesion molecule-like protein 1, DSCAML1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.92 E-value=0.0079 Score=43.98 Aligned_cols=80 Identities=15% Similarity=0.161 Sum_probs=46.3
Q ss_pred ccCCCCCcEEEEEEcCCCCC------CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 5 QGDHEGKGVIVSWVTPDEPG------SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 5 ~g~~~~~~~~v~W~t~~~~~------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
.....++++.|.|....... ...|+|.............. . .........++|++|+|+|.|.++|..
T Consensus 17 v~~~~~~si~l~W~~p~~~~~~~~i~~y~v~~~~~~~~~~~~~~~~--~----~~~~~~~~~~~i~~L~p~t~Y~~~V~a 90 (109)
T d1va9a1 17 LQPVTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQYSIV--E----MKATGDSEVYTLDNLKKFAQYGVVVQA 90 (109)
T ss_dssp EEECSSSEEEEEEECCCSSTTCSCCCEEEEEEEESSTTSCCSCBCC--B----CCCCSSEEEEEEESCCSSCCEEEEEEE
T ss_pred EEEecCCEEEEEEcCCCCCCCCCcEEEEEEEEeeccccccceeeee--E----EecCCCeeEEEECCCCcceEEEEEEEE
Confidence 33445789999999753221 12566766544322110000 0 011223556789999999999999954
Q ss_pred ------CCceeeEEEEcC
Q 040421 79 ------GNATRQFSFTTP 90 (407)
Q Consensus 79 ------~~~s~~~~F~T~ 90 (407)
+.+|....|+|.
T Consensus 91 ~n~~G~g~~S~~v~~~T~ 108 (109)
T d1va9a1 91 FNRAGTGPSSSEINATTL 108 (109)
T ss_dssp EETTEECCCCCCEECCCC
T ss_pred EcCCcCCCCCCCEEEEcC
Confidence 245666666664
|
| >d1j8ka_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.88 E-value=0.0076 Score=42.87 Aligned_cols=66 Identities=12% Similarity=0.211 Sum_probs=41.7
Q ss_pred eeccCCCCCcEEEEEEcCCCC-CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 3 ITQGDHEGKGVIVSWVTPDEP-GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
|.+.+...++++|.|.-+... ....++|........ .. . ..........+|+||+|+|.|.++|..
T Consensus 8 l~v~~vt~~sv~l~W~~p~~~~~~y~i~~~~~~~~~~-----~~-~----~~~~~~~~~~~i~~L~p~t~Y~~~V~a 74 (94)
T d1j8ka_ 8 LAFTDVDVDSIKIAWESPQGQVSRYRVTYSSPEDGIH-----EL-F----PAPDGEEDTAELQGLRPGSEYTVSVVA 74 (94)
T ss_dssp CEEEEEETTEEEEECCCCSSCCSCEEEEEEETTTEEE-----EE-C----CCCCSSCCEEEECSCCCCSEEEEEEEE
T ss_pred CEEEEecCCEEEEEEeCCCccccceEEEEEeecCCCc-----eE-E----EecCCCccEEEECCCCCCCEEEEEEEE
Confidence 455555678999999876432 345677777654211 00 0 011123345788999999999999965
|
| >d1v5ja_ b.1.2.1 (A:) KIAA1355 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA1355 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.85 E-value=0.0054 Score=45.17 Aligned_cols=74 Identities=12% Similarity=0.108 Sum_probs=44.5
Q ss_pred CCCcEEEEEEcCCCCC----CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCcC-----
Q 040421 9 EGKGVIVSWVTPDEPG----SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGVG----- 79 (407)
Q Consensus 9 ~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~~----- 79 (407)
..++++|.|.-+.... .-.|+|...... +....... ......++|.+|.|++.|.|||..-
T Consensus 19 t~~si~l~W~pp~~~~~~i~~Y~v~~~~~~~~-~~~~~~~~---------~~~~~~~~i~~L~p~t~Y~~rV~A~n~~g~ 88 (108)
T d1v5ja_ 19 TPRGVLLHWDPPELVPKRLDGYVLEGRQGSQG-WEVLDPAV---------AGTETELLVPGLIKDVLYEFRLVAFAGSFV 88 (108)
T ss_dssp CSSSEEEEEECCSCCSSCCCBEEEEEEETTCC-CEEEEEEE---------CSSCCEEECCCCCTTSCEECCBEEEETTEE
T ss_pred cCCEEEEEEEecccCCCceeEEEEEeeeeeee-eeeccccc---------cceeeeEEEEeccCCcEEEEEEEEEeCCCE
Confidence 4678999998653221 246777765432 22222111 1123456789999999999999642
Q ss_pred -CceeeEEEEcCCC
Q 040421 80 -NATRQFSFTTPPG 92 (407)
Q Consensus 80 -~~s~~~~F~T~p~ 92 (407)
.+|....++|...
T Consensus 89 s~~S~~~~~~T~~~ 102 (108)
T d1v5ja_ 89 SDPSNTANVSTSGL 102 (108)
T ss_dssp EEECSCCCCCCSSC
T ss_pred eCCcCceEEECCCC
Confidence 2345555666543
|
| >d2crma1 b.1.2.1 (A:8-114) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.84 E-value=0.0032 Score=46.23 Aligned_cols=71 Identities=14% Similarity=0.131 Sum_probs=40.8
Q ss_pred CCCcEEEEEEcCCCCC-----CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCcC----
Q 040421 9 EGKGVIVSWVTPDEPG-----SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGVG---- 79 (407)
Q Consensus 9 ~~~~~~v~W~t~~~~~-----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~~---- 79 (407)
.+++++|.|..+.... .-.|+|.............. . -.....|.||+|||.|.+||...
T Consensus 24 ~~~sv~l~W~~P~~~~g~~~~~y~v~~~~~~~~~~~~~~~~---------~--~~~~~~i~~L~p~t~Y~~rV~A~n~~G 92 (107)
T d2crma1 24 HSHSFKITWDPPKDNGGATINKYVVEMAEGSNGNKWEMIYS---------G--ATREHLCDRLNPGCFYRLRVYCISDGG 92 (107)
T ss_dssp ETTEEEEECCCCTTCCSSCCCEEEEEEEESSSSCCCEEEEC---------S--SCSEEEECSCCTTSCEEEEEEEEETTE
T ss_pred cCCEEEEEEEECccCCcceEEEEEEEEEeecCCCcEEEeec---------C--CccEEEEeccCCCCEEEEEEEEECCCc
Confidence 4678999998653221 23555554443322211111 1 11235789999999999999652
Q ss_pred --CceeeEEEEcC
Q 040421 80 --NATRQFSFTTP 90 (407)
Q Consensus 80 --~~s~~~~F~T~ 90 (407)
.+|+...|+|+
T Consensus 93 ~s~~S~~v~v~Tp 105 (107)
T d2crma1 93 QSAVSESLLVQTP 105 (107)
T ss_dssp ECCCCCCCCCCCC
T ss_pred CcCCCCcEEEECC
Confidence 34555555553
|
| >d1x5ha1 b.1.2.1 (A:8-126) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.82 E-value=0.0049 Score=46.19 Aligned_cols=80 Identities=21% Similarity=0.298 Sum_probs=46.1
Q ss_pred eeccCCCCCcEEEEEEcCCCC-CC-C----EEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEe
Q 040421 3 ITQGDHEGKGVIVSWVTPDEP-GS-N----TVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEV 76 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~-~~-~----~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v 76 (407)
|+.....++++.|.|...... .. . .|+|...... ...... ........+.|+||+|+|.|.++|
T Consensus 18 v~~~~~~~~si~v~W~~p~~~~~ng~i~~Y~v~y~~~~~~------~~~~~~----~~~~~~~~~~i~~L~p~t~Y~~~V 87 (119)
T d1x5ha1 18 LSLEVRNSKSIMIHWQPPAPATQNGQITGYKIRYRKASRK------SDVTET----LVSGTQLSQLIEGLDRGTEYNFRV 87 (119)
T ss_dssp EEEECCSSSEEEEEEECCCTTTCCSCEEEEBCEEEETTEE------EEEECC----BCCTTCCEEEEECCCSSCEEEEEC
T ss_pred eEEEEecCcEEEEEEEcccccCCCCCEEEEEEEEeecccc------cceeee----ecCCCccEEEeCCCCCCCEEEEEE
Confidence 344445568999999865311 11 2 2344443321 000000 011223567899999999999999
Q ss_pred Cc------CCceeeEEEEcCCC
Q 040421 77 GV------GNATRQFSFTTPPG 92 (407)
Q Consensus 77 ~~------~~~s~~~~F~T~p~ 92 (407)
.. +.+|....|+|.+.
T Consensus 88 ~A~n~~G~G~~S~~~~~~T~~~ 109 (119)
T d1x5ha1 88 AALTINGTGPATDWLSAETFES 109 (119)
T ss_dssp EEEETTEEEEECCCEEEECCSS
T ss_pred EEEcCCcCCCCCCCEEEEeCCC
Confidence 54 23677788999754
|
| >d1uc6a_ b.1.2.1 (A:) Ciliary neurotrophic factor receptor alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Ciliary neurotrophic factor receptor alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.82 E-value=0.014 Score=42.66 Aligned_cols=69 Identities=17% Similarity=0.074 Sum_probs=41.7
Q ss_pred CCCcEEEEEEcCCCCC-------CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCcC--
Q 040421 9 EGKGVIVSWVTPDEPG-------SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGVG-- 79 (407)
Q Consensus 9 ~~~~~~v~W~t~~~~~-------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~~-- 79 (407)
.+++++|.|..+.... ...++|....+.....+.. ......+|.+|.|+|.|.+||...
T Consensus 22 ~~~~l~l~W~~P~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~------------~~~~~~~i~~L~~~t~Y~~rVrA~~~ 89 (109)
T d1uc6a_ 22 NPRRLEVTWQTPSTWPDPESFPLKFFLRYRPLILDQWQHVEL------------SNGTAHTITDAYAGKEYIIQVAAKDN 89 (109)
T ss_dssp CTTCEEEEEECCTTCCCTTTTTBCEEEEEEESSSCCCCCEEE------------SSCSEEEETTCCSSSCEEEEEECCBS
T ss_pred CCCEEEEEEeCCcccCCCCeeEEEEEEEEeecCCCceEEecc------------CCceeEEeCCCCCCCEEEEEEEEEEC
Confidence 4678999999864211 1345566555433322211 012346789999999999999642
Q ss_pred ------CceeeEEEEc
Q 040421 80 ------NATRQFSFTT 89 (407)
Q Consensus 80 ------~~s~~~~F~T 89 (407)
.||....++|
T Consensus 90 ~~g~wS~WS~~~~~tt 105 (109)
T d1uc6a_ 90 EIGTWSDWSVAAHATP 105 (109)
T ss_dssp SSCCCCCCCEEEEECC
T ss_pred CCCCcCCCCCCEEeEC
Confidence 3556555544
|
| >d2cuia1 b.1.2.1 (A:6-106) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Tenascin-X species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.75 E-value=0.0031 Score=45.73 Aligned_cols=73 Identities=12% Similarity=0.141 Sum_probs=42.1
Q ss_pred eeeccCCCCCcEEEEEEcCCCC-CCCEEEEeecCCCCceEE--EEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 2 HITQGDHEGKGVIVSWVTPDEP-GSNTVLYWAENSTLKQQA--HGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 2 ~l~~g~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
+|++.+.++++++|.|...... ....|+|........... ........ ........+|.||+|+|.|.++|..
T Consensus 9 ~l~v~~~t~~sv~v~W~pp~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~v~~L~p~t~Y~~~V~a 84 (101)
T d2cuia1 9 QLSVTDVTTSSLRLNWEAPPGAFDSFLLRFGVPSPSTLEPHPRPLLQRELM----VPGTRHSAVLRDLRSGTLYSLTLYG 84 (101)
T ss_dssp CCEEESCCSSCEEEECCCCTTSCSEEEEEEECCCCSSSCCCSSCCCCEEEE----EETTCCEEEECSCCTTCEEEEEEEE
T ss_pred CcEEEEECCCEEEEEEEeccccccceEEEEEecCCCceeeccCCcceeEee----cccceeEEEeCCCCcCCEEEEEEEE
Confidence 3566677788999999765332 235777776543211000 00000000 0112344578999999999999965
|
| >d1x4za1 b.1.2.1 (A:8-115) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Brother of CDO precursor (BOC) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.68 E-value=0.013 Score=43.00 Aligned_cols=64 Identities=19% Similarity=0.197 Sum_probs=37.4
Q ss_pred cCCCCCcEEEEEEcCCCC----CCCEEEEeecCCCCc-eEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 6 GDHEGKGVIVSWVTPDEP----GSNTVLYWAENSTLK-QQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 6 g~~~~~~~~v~W~t~~~~----~~~~v~y~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
.....++++|.|.-.... ..-.|+|........ ....... ......++|++|+|+|.|.+||..
T Consensus 20 ~~~~~~sv~l~W~p~~~~g~~I~~Y~v~~~~~~~~~~~~~~~~~~---------~~~~~~~~v~~L~p~t~Y~frV~A 88 (108)
T d1x4za1 20 STASETSVYVTWIPRGNGGFPIQSFRVEYKKLKKVGDWILATSAI---------PPSRLSVEITGLEKGISYKFRVRA 88 (108)
T ss_dssp EECCSSEEEEECCCCCCTTSCCCEEEEEEEESSSCCCCEEEEEEE---------CTTCCEEEEESCCTTCEEEEEEEE
T ss_pred EEccCCEEEEEEECCCCCCCccEEEEEEEEecCCCCceEEEEEee---------cCCccEEEECCCCCCCEEEEEEEE
Confidence 344568999999533221 124566766544322 2221111 112234678999999999999965
|
| >d1wfoa1 b.1.2.1 (A:8-124) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.67 E-value=0.0062 Score=45.46 Aligned_cols=75 Identities=15% Similarity=0.272 Sum_probs=43.0
Q ss_pred CCCCCcEEEEEEcCCCCC----CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCcC---
Q 040421 7 DHEGKGVIVSWVTPDEPG----SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGVG--- 79 (407)
Q Consensus 7 ~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~~--- 79 (407)
....+++.|.|.-+.... ...|+|.............. .. .......|++|+|+|.|.+||..-
T Consensus 31 ~~~~~sv~v~W~~P~~~~g~i~~Y~i~y~~~~~~~~~~~~~~---~~------~~~~~~~i~~L~p~t~Y~~~V~A~n~~ 101 (117)
T d1wfoa1 31 EVRTTSVRLIWQPPAAPNGIILAYQITHRLNTTTANTATVEV---LA------PSARQYTATGLKPESVYLFRITAQTRK 101 (117)
T ss_dssp EECSSEEEEECCCCSCCCSCCCEEEEEEEESSCCCSCCCEEE---EC------TTCCEEEEESCCSSSEEEEEEEEECSS
T ss_pred EecCCEEEEEEECCCCCCCceEEEeeeeeeccCCCceEeEEe---cC------CceEEEEECCCCCCCEEEEEEEEECCC
Confidence 335689999998654321 23577766554322111111 00 112245689999999999999642
Q ss_pred ---CceeeEEEEcC
Q 040421 80 ---NATRQFSFTTP 90 (407)
Q Consensus 80 ---~~s~~~~F~T~ 90 (407)
.+|....++|.
T Consensus 102 G~g~~S~~~~~tT~ 115 (117)
T d1wfoa1 102 GWGEAAEALVVTTE 115 (117)
T ss_dssp CEEEEEEEEEECCS
T ss_pred cCCCCcCCEEEECC
Confidence 34555566653
|
| >d1fnha3 b.1.2.1 (A:183-271) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Fibronectin, different Fn3 modules species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.63 E-value=0.0047 Score=43.59 Aligned_cols=66 Identities=20% Similarity=0.213 Sum_probs=41.3
Q ss_pred eeccCCCCCcEEEEEEcCCCC-CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 3 ITQGDHEGKGVIVSWVTPDEP-GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
|.+.....++++|.|.-+... ..-.|+|...++...... .....-...+.|+||+|||.|.++|..
T Consensus 7 l~v~~~~~~s~~l~W~~p~~~i~~Y~i~~~~~~~~~~~~~----------~~~~~~~~~~~~~~L~p~t~Y~~~V~a 73 (89)
T d1fnha3 7 LRFLATTPNSLLVSWQPPRARITGYIIKYEKPGSPPREVV----------PRPRPGVTEATITGLEPGTEYTIYVIA 73 (89)
T ss_dssp EEEEEEETTEEEEEEECCSSCCSEEEEEEECTTSCCEECT----------TCCCTTCCEEEEESCCTTCEEEEEEEE
T ss_pred CEEEEecCCEEEEEEeCCCcCCceEEEEEeeccCCccEEE----------EEcCCCccEEEEEeeeCCCEEEEEEEE
Confidence 455555678999999976433 234777777554211100 001112335789999999999999965
|
| >d1wisa1 b.1.2.1 (A:8-118) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.62 E-value=0.013 Score=42.97 Aligned_cols=71 Identities=10% Similarity=-0.042 Sum_probs=39.5
Q ss_pred eeccCCCCCcEEEEEEcCCCCC----CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 3 ITQGDHEGKGVIVSWVTPDEPG----SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
|.......++++|.|.-..... ...|+|.............. .... .........|.||+|++.|.+||..
T Consensus 17 ~~~~~~~~~sv~l~W~pp~~~~~~i~~y~v~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~~v~~L~p~t~Y~frV~A 91 (111)
T d1wisa1 17 LGISNIGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLI-HQLS----NEPDARSMEVPDLNPFTCYSFRMRQ 91 (111)
T ss_dssp EEEESCCSSCEEEEEECCCCCSSCCSEEEEEECBSCCSTTSCCEEE-EEEE----SCTTCSEEEECSCCTTSEECCCCEE
T ss_pred CEEEEcCCCEEEEEEeCCCCCCCceeEEEEeeeecccCCCcceeee-eeee----cccceeEEEeCCCCCCCEEEEEEEE
Confidence 4444556789999998654322 23566665443222111111 1111 1112234678999999999999965
|
| >d1bqua2 b.1.2.1 (A:100-214) Cytokine receptor gp130 cytokine-binding domains {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Cytokine receptor gp130 cytokine-binding domains species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.58 E-value=0.006 Score=45.26 Aligned_cols=81 Identities=16% Similarity=0.241 Sum_probs=47.0
Q ss_pred eeccCCCCCcEEEEEEcCCCCC----CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 3 ITQGDHEGKGVIVSWVTPDEPG----SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
+...+...++++|.|.-..... .-.|+|....+........ .....-...+.|++|.|++.|.+||..
T Consensus 13 v~~~~~~~~si~v~W~~p~~~~~~~~~Y~v~y~~~~~~~~~~~~~--------~~~~~~~~~~~i~~L~~~t~Y~~~V~a 84 (115)
T d1bqua2 13 VINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPP--------EDTASTRSSFTVQDLKPFTEYVFRIRC 84 (115)
T ss_dssp EECC--CCSCEEEEEECCGGGGTSCEEEEEEEEETTCSSCEECCG--------GGGCSCCSEEEECSCCSSEEEEEEEEE
T ss_pred EEEeccCCCEEEEEEeeccccccceeeeeeeeeeeeeeeeecccc--------ccccccccEEeeCCCccCcEEEEEEEE
Confidence 3434455789999998653222 2466677655433211100 011122346789999999999999943
Q ss_pred ----C-----CceeeEEEEcCC
Q 040421 79 ----G-----NATRQFSFTTPP 91 (407)
Q Consensus 79 ----~-----~~s~~~~F~T~p 91 (407)
+ .+|....++|+.
T Consensus 85 ~~~~G~g~~S~~S~~~~~~T~~ 106 (115)
T d1bqua2 85 MKEDGKGYWSDWSEEASGITYE 106 (115)
T ss_dssp EETTSCSCCCCCCCCEEEEECC
T ss_pred EeCCCccCCcCCcCCEEEECCC
Confidence 1 245677888754
|
| >d2dn7a1 b.1.2.1 (A:8-101) Receptor-type tyrosine-protein phosphatase F, PTPRF {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Receptor-type tyrosine-protein phosphatase F, PTPRF species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.50 E-value=0.032 Score=39.39 Aligned_cols=60 Identities=15% Similarity=0.259 Sum_probs=38.5
Q ss_pred CCCCcEEEEEEcCCCCC----CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 8 HEGKGVIVSWVTPDEPG----SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 8 ~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
...++++|.|.-+.... ...|+|............- . .-....+|++|+|++.|.+||..
T Consensus 11 ~~~~sv~l~W~pP~~~~g~i~~Y~i~~~~~~~~~~~~~~~-----~------~~~~~~~i~~L~p~t~Y~~~V~A 74 (94)
T d2dn7a1 11 TAMNTALLQWHPPKELPGELLGYRLQYCRADEARPNTIDF-----G------KDDQHFTVTGLHKGTTYIFRLAA 74 (94)
T ss_dssp CSTTEEEEEEECCSSCSSCCCEEEEEEEETTCSSCEEEEE-----E------TTCCEEEEECCCTTCEEEEEEEE
T ss_pred EeCCEEEEEEeCCCCCCCceEEEEEEEEEcCCCCcEEEEc-----C------CCccEEEEEccCCeeEEEEEEEE
Confidence 45679999999764322 2457777766543332211 1 11234578999999999999964
|
| >d1wfna1 b.1.2.1 (A:8-113) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Sidekick 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.46 E-value=0.014 Score=42.58 Aligned_cols=66 Identities=21% Similarity=0.269 Sum_probs=39.7
Q ss_pred eeccCCCCCcEEEEEEcCCCCC----CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 3 ITQGDHEGKGVIVSWVTPDEPG----SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
|.+.....+++.|.|..+.... .-.|+|............ . . ..-....+|+||+|++.|.++|..
T Consensus 17 l~~~~~~~~sv~l~W~~P~~~ng~i~~Y~i~~~~~~~~~~~~~~-~---~------~~~~~~~~i~~L~p~t~Y~~~V~A 86 (106)
T d1wfna1 17 LSFSEILDTSLKVSWQEPGEKNGILTGYRISWEEYNRTNTRVTH-Y---L------PNVTLEYRVTGLTALTTYTIEVAA 86 (106)
T ss_dssp CEEESCCSSEEEEECCCCTTCCSCCCEEEEEEEESSCGGGCCCE-E---E------CSSCCEEEEESCCTTCEEEEEEEE
T ss_pred cEEEEecCCEEEEEEECCCCCCCcEEeEEEEEEECCCCcceEEE-e---c------CCCeeEEEEccCCCCCEEEEEEEE
Confidence 4455556789999998654321 245667665432211110 0 0 111235678999999999999964
|
| >d1n26a3 b.1.2.1 (A:196-299) Interleukin-6 receptor alpha chain, domains 2 and 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interleukin-6 receptor alpha chain, domains 2 and 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.45 E-value=0.027 Score=40.71 Aligned_cols=60 Identities=20% Similarity=0.259 Sum_probs=37.8
Q ss_pred CCCCcEEEEEEcCCC--CC----CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 8 HEGKGVIVSWVTPDE--PG----SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 8 ~~~~~~~v~W~t~~~--~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
..++++.|.|..+.. .. ...|+|.......+....- ........|.+|+|++.|.+||..
T Consensus 15 ~~~~~l~v~W~~P~~~~~~~~~~~y~v~~~~~~~~~~~~~~~-----------~~~~~~~~i~~L~p~t~Y~~rVra 80 (104)
T d1n26a3 15 RNPRWLSVTWQDPHSWNSSFYRLRFELRYRAERSKTFTTWMV-----------KDLQHHCVIHDAWSGLRHVVQLRA 80 (104)
T ss_dssp TCTTCEEEEEECCTTCCCSSSCEEEEEEEEETTCSCCEEEEC-----------GGGCSEEEESSCCTTCCEEEEEEE
T ss_pred cCCCEEEEEEEeeeecCCCceeEEEEEEEeeCCCCceeeecc-----------ccceEEEEECCCCCCCEEEEEEEE
Confidence 345789999997632 11 2466677665543322210 112235678999999999999964
|
| >d1uena_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA0343 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.44 E-value=0.0032 Score=47.58 Aligned_cols=34 Identities=32% Similarity=0.381 Sum_probs=27.4
Q ss_pred EEEEEcCCCCCCEEEEEeCcC------CceeeEEEEcCCC
Q 040421 59 HHCTIEDLEFDTKYYYEVGVG------NATRQFSFTTPPG 92 (407)
Q Consensus 59 ~~~~l~gL~p~t~Y~Y~v~~~------~~s~~~~F~T~p~ 92 (407)
..++|.+|+|+|.|.+||..- .+|....|+|++.
T Consensus 80 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 119 (125)
T d1uena_ 80 THGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEG 119 (125)
T ss_dssp SEEEEESCCSSCEEEEEEEEEESSCEEEECCCEEEECCCC
T ss_pred cEEEECCCCCCCEEEEEEEEEeCCcccCCCCCEEEECCCC
Confidence 468899999999999999642 4677789999764
|
| >d1axib2 b.1.2.1 (B:131-236) Growth hormone receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Growth hormone receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.43 E-value=0.0051 Score=45.18 Aligned_cols=69 Identities=19% Similarity=0.254 Sum_probs=43.0
Q ss_pred CCcEEEEEEcCCCCC--------CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc---
Q 040421 10 GKGVIVSWVTPDEPG--------SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV--- 78 (407)
Q Consensus 10 ~~~~~v~W~t~~~~~--------~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~--- 78 (407)
..++.|+|.-+.... .-.|+|+...+..+..... .....++|++|+|+|.|.+||..
T Consensus 20 ~~~v~vsW~pP~~~~~~~~~~~l~Y~v~y~~~~~~~w~~~~~------------~~~~~~~i~~L~~~t~Y~frVRa~~~ 87 (106)
T d1axib2 20 HADIQVRWEAPRNADIQKGWMVLEYELQYKEVNETKWKMMDP------------ILTTSVPVYSLKVDKEYEVRVRSKQR 87 (106)
T ss_dssp EEEEEEEEECCTTSCTTTTSCCEEEEEEEEETTCSSCEECCC------------BSSSEEEEEEEETTSCEEEEEEEEET
T ss_pred cCeEEEEEcCCCccCCCCCeeEEEEEEeeeecCCccceeeee------------cccceEEECCCCCCCEEEEEEEEEEC
Confidence 347999999764211 2466777766544432210 11235779999999999999954
Q ss_pred -----CCceeeEEEEcC
Q 040421 79 -----GNATRQFSFTTP 90 (407)
Q Consensus 79 -----~~~s~~~~F~T~ 90 (407)
+.||+...++|+
T Consensus 88 ~~g~ws~wS~~v~v~~P 104 (106)
T d1axib2 88 NSGNYGEFSEVLYVTLP 104 (106)
T ss_dssp TSSCCCCCCCCEEECCC
T ss_pred CCCCCCCCCCCEEEECC
Confidence 135666666654
|
| >d1ueya_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA0343 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.36 E-value=0.032 Score=41.85 Aligned_cols=67 Identities=18% Similarity=0.171 Sum_probs=38.7
Q ss_pred eeccCCCCCcEEEEEEcCCCCCC----CEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 3 ITQGDHEGKGVIVSWVTPDEPGS----NTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~~~----~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
|++.....++++|.|.-...... ..++|................ .......|.+|+|++.|.+||..
T Consensus 23 ~~v~~~~~~sv~l~W~~p~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~i~~L~p~t~Y~frV~A 93 (127)
T d1ueya_ 23 LELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTEV---------SGTQTTAQLNLSPYVNYSFRVMA 93 (127)
T ss_dssp EEEECCSSSCEEEEEECCCCCSSCEEEEEEEEEBTTTCTTCEEEEEEE---------ESSCCEEEECCCTTCEECCEEEE
T ss_pred cEEEEecCCeEEEEEeCCcccccceEeeeeeeccccccceeEEEEeec---------CCceEEEECCCccCCEEEEEEEE
Confidence 55556667899999987643332 244444443322221111110 11233567899999999999954
|
| >d1cfba1 b.1.2.1 (A:610-709) Neuroglian, two amino proximal Fn3 repeats {Drosophila melanogaster [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neuroglian, two amino proximal Fn3 repeats species: Drosophila melanogaster [TaxId: 7227]
Probab=95.03 E-value=0.021 Score=40.93 Aligned_cols=60 Identities=8% Similarity=0.065 Sum_probs=35.9
Q ss_pred CCcEEEEEEcCCCCC----CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 10 GKGVIVSWVTPDEPG----SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 10 ~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
.++++|.|.-..... ...|+|................ . -...+.+.+|+|+|.|.+||..
T Consensus 18 ~~sv~lsW~pp~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~--~-------~~~~~~~~~L~p~t~Y~frV~A 81 (100)
T d1cfba1 18 ADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAYEKV--P-------NTDSSFVVQMSPWANYTFRVIA 81 (100)
T ss_dssp SSEEEEEEECCCCTTSCCCEEEEEEEESSSTTCCEEEEEEE--E-------TTCSEEEEECCSSEEEEEEEEE
T ss_pred CCEEEEEEcCCcccccceEEEEEEEecCCCCceeeEEeeec--C-------CceEEEEecCCCCCEEEEEEEE
Confidence 468999998654322 2467777655433322211111 0 0123467799999999999975
|
| >d1uema_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: KIAA1568 protein species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.74 E-value=0.016 Score=43.10 Aligned_cols=62 Identities=16% Similarity=0.163 Sum_probs=35.3
Q ss_pred CCCCCcEEEEEEcCCCCC----CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 7 DHEGKGVIVSWVTPDEPG----SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 7 ~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
....++++|.|.-..... .-.|+|.............. . .-....+|++|+|+|.|.+||..
T Consensus 26 ~~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~--~--------~~~~~~~v~~L~p~t~Y~frV~A 91 (117)
T d1uema_ 26 DVTKNSVTLSWQPGTPGTLPASAYIIEAFSQSVSNSWQTVAN--H--------VKTTLYTVRGLRPNTIYLFMVRA 91 (117)
T ss_dssp EECSSCEEEECCCCBCSSSCCCEEEEEEEETTTEEEEEEEEE--E--------ECSSEEEECSCCTTCEEEEEEEE
T ss_pred EccCCEEEEEEECCCcCCCCeEEEEEEEeccCCceeeEEecc--c--------cccccceECCCCCCCEEEEEEEE
Confidence 345689999997443211 23555665443211111111 0 01124578999999999999965
|
| >d1wfta_ b.1.2.1 (A:) Host cell factor 2, HCF-2 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Host cell factor 2, HCF-2 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=94.73 E-value=0.077 Score=39.49 Aligned_cols=85 Identities=12% Similarity=0.134 Sum_probs=46.0
Q ss_pred CCCcEEEEEEcCCCC----CCCEEEEeecCCCCceEE--EEEEEEEEecCC---cceeEEEEEEcCCCCCCEEEEEeCc-
Q 040421 9 EGKGVIVSWVTPDEP----GSNTVLYWAENSTLKQQA--HGIVLTYNYFNY---TSNCIHHCTIEDLEFDTKYYYEVGV- 78 (407)
Q Consensus 9 ~~~~~~v~W~t~~~~----~~~~v~y~~~~~~~~~~~--~~~~~~~~~~~~---~~~~~~~~~l~gL~p~t~Y~Y~v~~- 78 (407)
..+++.|.|.-+... ..-.|+|........... ......+..... ...-.....|.+|+|+|.|.+||..
T Consensus 19 ~~~si~l~W~~P~~~~g~i~~Y~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~frV~A~ 98 (123)
T d1wfta_ 19 NVDGIHLSWEPPTSPSGNILEYSAYLAIRTAQMQDNPSQLVFMRIYCGLKTSCTVTAGQLANAHIDYTSRPAIVFRISAK 98 (123)
T ss_dssp CSSEEEEEEECCSSCCSSCCCEEEEEEECSSCCCSCSCCCEEEEEEEESCSEEEEEHHHHTTCCCBCSSSCEEEEEEEEB
T ss_pred CCCEEEEEecCchhcCCceEEEEEEEEECCCCCccccceeeeEEEecCCceeEeecCCccEEEEcCCCCCCEEEEEEEEe
Confidence 357899999965432 235777776544321100 000000000000 0000112367899999999999954
Q ss_pred -----CCceeeEEEEcCCCC
Q 040421 79 -----GNATRQFSFTTPPGV 93 (407)
Q Consensus 79 -----~~~s~~~~F~T~p~~ 93 (407)
+.+|....|+|....
T Consensus 99 N~~G~Gp~S~~~~~~t~~~~ 118 (123)
T d1wfta_ 99 NEKGYGPATQIRWLQGNSKS 118 (123)
T ss_dssp SSSSBCCCEEEEEECCSCCS
T ss_pred cCCcCCCCCCcEEEEecCCC
Confidence 346788888886543
|
| >d1bpva_ b.1.2.1 (A:) Type I titin module {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Type I titin module species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.73 E-value=0.0072 Score=43.92 Aligned_cols=60 Identities=18% Similarity=0.148 Sum_probs=36.9
Q ss_pred CCCcEEEEEEcCCCC-----CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 9 EGKGVIVSWVTPDEP-----GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 9 ~~~~~~v~W~t~~~~-----~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
+.++++|+|.-+... ....++|.......+..... ........+|+||+|+|.|.|||..
T Consensus 15 t~~sv~lsW~~P~~~~g~~i~~y~~~~~~~~~~~~~~~~~----------~~~~~~~~~i~~L~p~t~Y~frV~A 79 (104)
T d1bpva_ 15 TRHTVTLKWAKPEYTGGFKITSYIVEKRDLPNGRWLKANF----------SNILENEFTVSGLTEDAAYEFRVIA 79 (104)
T ss_dssp ETTEEEEECCCCSCCTTCCCSCCEEEEEETTSCCCEECCC----------SCCCSSEEEECSCCSSCCEEEEEEE
T ss_pred cCCEEEEEEEeccccCcceEEEEEEEeecccccceeEEEe----------eccceeEEEEcCCCCCCEEEEEEEE
Confidence 457999999865322 23466666655432221110 1112334678999999999999975
|
| >d1qg3a2 b.1.2.1 (A:1218-1320) Integrin beta-4 subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Integrin beta-4 subunit species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.10 E-value=0.013 Score=42.32 Aligned_cols=69 Identities=23% Similarity=0.211 Sum_probs=38.8
Q ss_pred eccCCCCCcEEEEEEcCCCCC----CCEEEEeecCCCCce-EEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 4 TQGDHEGKGVIVSWVTPDEPG----SNTVLYWAENSTLKQ-QAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 4 ~~g~~~~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
.......+++.|.|.-+.... .-.|+|......... ........ .+ . -...++|.||+|++.|.+||..
T Consensus 10 ~~~~~~~~sv~v~W~~P~~~~g~i~~Y~i~~~~~~~~~~~~~~~~~~~~---~~-~--~~~~~~i~~L~p~t~Y~~~V~A 83 (103)
T d1qg3a2 10 AFNVVSSTVTQLSWAEPAETNGEITAYEVCYGLVNDDNRPIGPMKKVLV---DN-P--KNRMLLIENLRESQPYRYTVKA 83 (103)
T ss_dssp EEEEEETTEEEEECCCCSCCSSCCCEEEEEEEEBCTTSCBCSCCEEEEE---CC-T--TCCEEEECCCCTTCCEEEEEEE
T ss_pred EEEEecCCEEEEEEEECccCCCCceEEEEEeeccccccccccceEEEEe---cC-C--CceEEEEeecCCCCEEEEEEEE
Confidence 334445789999999764322 235666554432110 00011111 01 1 1235789999999999999964
|
| >d1s95a_ d.159.1.3 (A:) Serine/threonine protein phosphatase 5, PP5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Serine/threonine protein phosphatase 5, PP5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.91 E-value=0.045 Score=48.39 Aligned_cols=71 Identities=17% Similarity=0.196 Sum_probs=39.3
Q ss_pred EEEEEecCCCCCCchhhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHh-hhhccCCeEEccCCCccc
Q 040421 100 TFGLIGDLGQTYYSNRTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIE-RNAAYQPWIWTVGNHEID 176 (407)
Q Consensus 100 ~f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~-~~~~~~P~~~~~GNHD~~ 176 (407)
.+.++||+|......-.+-+....+..-.-.|++||+|.... ...+...-.+. .+...--++...||||..
T Consensus 61 pv~VvGDiHGq~~DL~~if~~~g~p~~~~~ylFLGDYVDRG~------~slEvi~lL~~lKi~yP~~v~LLRGNHE~~ 132 (324)
T d1s95a_ 61 KITVCGDTHGQFYDLLNIFELNGLPSETNPYIFNGDFVDRGS------FSVEVILTLFGFKLLYPDHFHLLRGNHETD 132 (324)
T ss_dssp EEEEECCCTTCHHHHHHHHHHHCCCBTTBCEEEESCCSSSST------THHHHHHHHHHHHHHSTTTEEEECCTTSSH
T ss_pred CEEEEEECCCCHHHHHHHHHHCCCCCCCCeEEEecccccCcC------cceeehHHHHHHHHhCCCcEEeccCCcccc
Confidence 678899999865332221111222212234789999996532 22333222221 222345689999999984
|
| >d1cfba2 b.1.2.1 (A:710-814) Neuroglian, two amino proximal Fn3 repeats {Drosophila melanogaster [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neuroglian, two amino proximal Fn3 repeats species: Drosophila melanogaster [TaxId: 7227]
Probab=93.86 E-value=0.062 Score=38.76 Aligned_cols=65 Identities=15% Similarity=0.133 Sum_probs=38.4
Q ss_pred ccCCCCCcEEEEEEcCC-----CC-CCCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 5 QGDHEGKGVIVSWVTPD-----EP-GSNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 5 ~g~~~~~~~~v~W~t~~-----~~-~~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
......++++|.|.-.. .+ ..-.|+|............ .. ........+|.+|+|+|.|.++|..
T Consensus 13 ~~~~~~~si~v~W~p~~~~~~ng~i~~Y~I~y~~~~~~~~~~~~-~~--------~~~~~~~~~i~~L~p~t~Y~~~V~A 83 (105)
T d1cfba2 13 GQGTEPNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWENN-NI--------FDWRQNNIVIADQPTFVKYLIKVVA 83 (105)
T ss_dssp EECSSTTCEEEECCCCCGGGTCSSSCEEEEEEEESSTTCCCEEE-EE--------CCTTCCEEEECSCCSSCEEEEEEEE
T ss_pred EEEccCCeEEEEEeCCChhhcCceEEEEEEEeeeeccccceeEE-Ee--------cCCCccEEEECCCCCCCEEEEEEEE
Confidence 33445689999997421 11 2345777765543221111 11 0112345788999999999999965
|
| >d1jk7a_ d.159.1.3 (A:) Protein phosphatase-1 (PP-1) {Human (Homo sapiens), beta isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase-1 (PP-1) species: Human (Homo sapiens), beta isoform [TaxId: 9606]
Probab=93.28 E-value=0.065 Score=46.65 Aligned_cols=69 Identities=23% Similarity=0.343 Sum_probs=39.3
Q ss_pred EEEEecCCCCCCchhhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHh-hhhccCCeEEccCCCccc
Q 040421 101 FGLIGDLGQTYYSNRTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIE-RNAAYQPWIWTVGNHEID 176 (407)
Q Consensus 101 f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~-~~~~~~P~~~~~GNHD~~ 176 (407)
+.++||+|........+-+....+ ...-.|++||++.... ...+...-++. .+...--++...||||..
T Consensus 54 v~VvGDiHG~~~DL~~if~~~g~p-~~~~ylFLGDYVDRG~------~slE~i~lL~aLKi~~P~~v~lLRGNHE~~ 123 (294)
T d1jk7a_ 54 LKICGDIHGQYYDLLRLFEYGGFP-PESNYLFLGDYVDRGK------QSLETICLLLAYKIKYPENFFLLRGNHECA 123 (294)
T ss_dssp EEEECBCTTCHHHHHHHHHHHCCT-TSSCEEECSCCSSSSS------CHHHHHHHHHHHHHHSTTTEEECCCTTSSH
T ss_pred eEEEEECCCChHhHHHHHhhcCCC-ccceEEeeccccCCCc------cchHHHHHHHHHHhhCCCeEEEecCCcccc
Confidence 788999998654332222222222 2345788999996532 22333222221 222345689999999985
|
| >d2dtge3 b.1.2.1 (E:468-592) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Insulin receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.20 E-value=0.0064 Score=45.92 Aligned_cols=78 Identities=10% Similarity=-0.000 Sum_probs=41.0
Q ss_pred CeeeccCCCCCcEEEEEEcCCCCC-CCEEEEee----cCCCCceEEE-----EE--------EEEEEecCCcceeEEEEE
Q 040421 1 VHITQGDHEGKGVIVSWVTPDEPG-SNTVLYWA----ENSTLKQQAH-----GI--------VLTYNYFNYTSNCIHHCT 62 (407)
Q Consensus 1 v~l~~g~~~~~~~~v~W~t~~~~~-~~~v~y~~----~~~~~~~~~~-----~~--------~~~~~~~~~~~~~~~~~~ 62 (407)
++|+...-.++++.|.|.-+..+. .....|.. .+........ +. .................+
T Consensus 6 lnl~~~~~sstsv~lsW~pP~~~~~~~i~gY~I~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (125)
T d2dtge3 6 LKFSYIRTSFDKILLRWEPYWPPDFRDLLGFMLFYKEAPYQNVTEFDGQDACGSNSWTVVDIDPPLRSNDPKSQNHPGWL 85 (125)
T ss_dssp CCCSEEEECSSCEEEECCCCCSSSCCCEEEECCCSSSCCTTTCCCCCCCCCSCCCCCCCCCSCCEEEECCCCSSSCCEEE
T ss_pred EEEEEEEecCCEEEEEEeCCCccCCCcEEEEEEEEEECCCCceEEEeeccccCCcccceecccCcceeeeecCCccCEEE
Confidence 356667777899999998764333 23444533 2221000000 00 000000011122344678
Q ss_pred EcCCCCCCEEEEEeCc
Q 040421 63 IEDLEFDTKYYYEVGV 78 (407)
Q Consensus 63 l~gL~p~t~Y~Y~v~~ 78 (407)
|+||+|+|.|.++|..
T Consensus 86 l~~L~p~T~Y~~~V~A 101 (125)
T d2dtge3 86 MRGLKPWTQYAIFVKT 101 (125)
T ss_dssp ECSCCSSCBCCBEEEE
T ss_pred ECCCccCCEEEEEEEE
Confidence 9999999999999964
|
| >d3c5wc1 d.159.1.3 (C:6-293) Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.60 E-value=0.094 Score=45.51 Aligned_cols=69 Identities=17% Similarity=0.146 Sum_probs=38.2
Q ss_pred EEEEecCCCCCCchhhHHHhhhCCCCCceEEEcCCccccCCCCCCCchhhhHHHHHHh-hhhccCCeEEccCCCccc
Q 040421 101 FGLIGDLGQTYYSNRTLTHYELNPIKGQTVLFVGDLSYADDYPFHDNNRWDTWGRFIE-RNAAYQPWIWTVGNHEID 176 (407)
Q Consensus 101 f~~~gD~~~~~~~~~~l~~~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~~~~~~~~~-~~~~~~P~~~~~GNHD~~ 176 (407)
+.++||+|........+-+....+ .-.-.|++||++.... ...+...-.+. .+....-++...||||..
T Consensus 47 v~VvGDlHG~~~DL~~if~~~g~p-~~~~ylFLGDYVDRG~------~slEvl~lL~alKi~~P~~v~lLRGNHE~~ 116 (288)
T d3c5wc1 47 VTVCGDVHGQFHDLMELFRIGGKS-PDTNYLFMGDYVDRGY------YSVETVTLLVALKVRYRERITILRGNHESR 116 (288)
T ss_dssp EEEECBCTTCHHHHHHHHHHHCCT-TTSCEEECSCCCCSSS------SHHHHHHHHHHHHHHCTTTEEECCCTTSSH
T ss_pred eEEEeeCCCCHHHHHHHHHhcCCC-ccceEEecCcccCCCC------cceeHHHHHHHHHhhCCCeEEEeccCCccc
Confidence 788999998754322221222221 2234788999996532 12222221111 122345689999999974
|
| >d1cd9b1 b.1.2.1 (B:1-107) Granulocyte colony-stimulating factor (GC-SF) receptor {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Granulocyte colony-stimulating factor (GC-SF) receptor species: Mouse (Mus musculus) [TaxId: 10090]
Probab=92.23 E-value=0.16 Score=36.48 Aligned_cols=71 Identities=10% Similarity=-0.018 Sum_probs=40.8
Q ss_pred cCCCCCcEEEEEEcCCCCC---CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCcC
Q 040421 6 GDHEGKGVIVSWVTPDEPG---SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGVG 79 (407)
Q Consensus 6 g~~~~~~~~v~W~t~~~~~---~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~~ 79 (407)
.....++|+++|.-..... ...+.|.................. .........+.+++|+|++.|.+||...
T Consensus 15 ~~~~~~sv~~sW~p~~d~~~~~~y~~~y~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~L~~~t~Y~frV~A~ 88 (107)
T d1cd9b1 15 MHLTTNSLVCQWEPGPETHLPTSFILKSFRSRADCQYQGDTIPDCV---AKKRQNNCSIPRKNLLLYQYMAIWVQAE 88 (107)
T ss_dssp EETTTTEEEEEEECCSCCSSCCEEEEEEEECCGGGCSCCCEEEEEE---CCTTCCEEEEEGGGCCTTSCEEEEEEEE
T ss_pred EecCCCEEEEEEcCCCCCCCCcceeEEEEEeecccceeeeeeeeec---cccCccccEEEcCCCCcCceEEEEEEEE
Confidence 3445679999998654332 235566554432211111111000 1123345678899999999999999764
|
| >d2gysa4 b.1.2.1 (A:317-416) Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.12 E-value=0.057 Score=38.49 Aligned_cols=60 Identities=22% Similarity=0.344 Sum_probs=33.8
Q ss_pred CCCcEEEEEEcCCCCC-----CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 9 EGKGVIVSWVTPDEPG-----SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 9 ~~~~~~v~W~t~~~~~-----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
..+++.|.|..+.... .-.|+|....+.-........ .-...++|.+|+|++.|.+||..
T Consensus 16 ~~~s~~l~W~~P~~~~~~~~~~Y~v~y~~~~~~~~~~~~~~~----------~~~~~~~l~~L~p~t~Y~~rVRa 80 (100)
T d2gysa4 16 DGDSYSLRWETMKMRYEHIDHTFEIQYRKDTATWKDSKTETL----------QNAHSMALPALEPSTRYWARVRV 80 (100)
T ss_dssp --CCCEEEEEC--------CEEEEEEEECSSSCSTTSCEEEE----------ESCSEEECCCCCSSCCCEEEEEE
T ss_pred CCCEEEEEEecCcccCCccceEEEEEEeecccceeceeeccc----------CCceEEEeCCCCCCCeEEEEEEE
Confidence 3468999998875321 256777765443211111110 01235789999999999999964
|
| >d1auia_ d.159.1.3 (A:) Protein phosphatase-2B (PP-2B, calcineurin A subunit) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metallo-dependent phosphatases superfamily: Metallo-dependent phosphatases family: Protein serine/threonine phosphatase domain: Protein phosphatase-2B (PP-2B, calcineurin A subunit) species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.58 E-value=0.13 Score=47.47 Aligned_cols=27 Identities=7% Similarity=-0.052 Sum_probs=22.0
Q ss_pred HHHHHHHHHhCCCcEEEeccccccccc
Q 040421 275 RVLYEPWFVEYKVDVVFAAHVHAYERS 301 (407)
Q Consensus 275 ~~~l~~l~~~~~vdlvl~GH~H~y~r~ 301 (407)
.+++...++++++.+++-||.=.-+-.
T Consensus 249 ~~a~~~FL~~n~L~~IIR~HE~~~~Gy 275 (473)
T d1auia_ 249 YPAVCEFLQHNNLLSILRAHEAQDAGY 275 (473)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCCTTSE
T ss_pred hHHHHHHHHHcCCcEEEEcCcchhhhh
Confidence 467889999999999999999754433
|
| >d1wj3a_ b.1.2.1 (A:) Contactin 3 (KIAA1496) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Contactin 3 (KIAA1496) species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.06 E-value=0.24 Score=36.15 Aligned_cols=67 Identities=16% Similarity=0.258 Sum_probs=37.8
Q ss_pred CCCcEEEEEEcCCC--CC----CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc----
Q 040421 9 EGKGVIVSWVTPDE--PG----SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV---- 78 (407)
Q Consensus 9 ~~~~~~v~W~t~~~--~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~---- 78 (407)
..++++|.|..... .. .-.|+|............ . . ....+.+|+|+|.|.+||..
T Consensus 30 ~~~~i~v~W~~~~~~~~~g~i~~Y~v~y~~~~~~~~~~~~-~---------~----~~~~~~~L~p~t~Y~~~V~A~n~~ 95 (117)
T d1wj3a_ 30 TDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQNNVQVLN-T---------N----KTSAELVLPIKEDYIIEVKATTDG 95 (117)
T ss_dssp ETTEEEEECCCCCCCSSSCCEEEEEEEEEESSCSSCEEEE-E---------S----SSEEEEECCCSSCEEEEEEEEESS
T ss_pred cCCEEEEEEeecccccCCCceeEEEEEEEecCCCceeeee-c---------e----eeEEEeeccCCcEEEEEEEEEcCC
Confidence 45789999986421 11 235555555543322111 1 0 11245689999999999964
Q ss_pred --CCceeeEEEEc
Q 040421 79 --GNATRQFSFTT 89 (407)
Q Consensus 79 --~~~s~~~~F~T 89 (407)
+.+|+...+.+
T Consensus 96 G~G~~S~~v~v~~ 108 (117)
T d1wj3a_ 96 GDGTSSEQIRIPR 108 (117)
T ss_dssp CCCCBCCCEEECC
T ss_pred ccCCCCCCEEEec
Confidence 24565555543
|
| >d2dtge1 b.1.2.1 (E:808-909) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Insulin receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.74 E-value=0.0041 Score=45.37 Aligned_cols=75 Identities=21% Similarity=0.231 Sum_probs=42.7
Q ss_pred CCCCCcEEEEEEcCCCCCCCEEEEee----cCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc----
Q 040421 7 DHEGKGVIVSWVTPDEPGSNTVLYWA----ENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV---- 78 (407)
Q Consensus 7 ~~~~~~~~v~W~t~~~~~~~~v~y~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~---- 78 (407)
...++++.|.|..+.......+.|.. ..+...... .. .......+.+.|.+|+|++ |.+||..
T Consensus 15 ~~~~~sv~l~W~pP~~~ng~i~~Y~v~y~~~~~~~~~~~----~~----~~~~~~~~~~~~~~L~~~t-Y~~rV~A~n~~ 85 (102)
T d2dtge1 15 IFENNVVHLMWQEPKEPNGLIVLYEVSYRRYGDEELHLC----DT----RKHFALERGCRLRGLSPGN-YSVRIRATSLA 85 (102)
T ss_dssp SSSSSCCCCCCCCCCSCSSCEEEECCCCBSSSBCCCCCC----CC----SSSCCCTTCCCCCSCCSSE-ECCCCCEEETT
T ss_pred EECCCEEEEEEEeCCCCcceEEEeeeEEEecCCCCceee----ee----eecccceEEEEEeccceee-EEEEEEEEcCC
Confidence 34568899999876544334555543 221111000 00 0112234457789999975 9999853
Q ss_pred --CCceeeEEEEcC
Q 040421 79 --GNATRQFSFTTP 90 (407)
Q Consensus 79 --~~~s~~~~F~T~ 90 (407)
+.+|....|.|+
T Consensus 86 G~g~~S~~v~f~~~ 99 (102)
T d2dtge1 86 GNGSWTEPTYFYVT 99 (102)
T ss_dssp BCCCCCCCCEECCC
T ss_pred ccCCCCCCEEEEcc
Confidence 346777788774
|
| >d1x5ia1 b.1.2.1 (A:8-120) Neogenin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Neogenin species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.71 E-value=0.091 Score=38.39 Aligned_cols=71 Identities=20% Similarity=0.220 Sum_probs=41.3
Q ss_pred CCcEEEEEEcCCCCC----CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCcC---Cce
Q 040421 10 GKGVIVSWVTPDEPG----SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGVG---NAT 82 (407)
Q Consensus 10 ~~~~~v~W~t~~~~~----~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~~---~~s 82 (407)
.+++.|.|.-..... .-.|+|+...... ... .. ..-....+|.+|+|++.|.++|..- +.+
T Consensus 33 ~~si~v~W~~p~~~~g~i~~Y~i~~~~~~~~~-~~~-----~~------~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g 100 (113)
T d1x5ia1 33 VTSIVVSWTPPENQNIVVRGYAIGYGIGSPHA-QTI-----KV------DYKQRYYTIENLDPSSHYVITLKAFNNVGEG 100 (113)
T ss_dssp TTEEEEEEECCSCTTBCCCEEEEEECSSCGGG-EEE-----EC------CTTCCEEEECSCCSSCEECCEEEEECSSCBC
T ss_pred CCEEEEEEEccccCCccEEEEEEEeeeccccc-eee-----ee------eCCccEEEEeccccCcEEEEEEEEECCCcCC
Confidence 468999999654322 2366666544321 111 00 1112356799999999999999652 222
Q ss_pred e--eEEEEcCCC
Q 040421 83 R--QFSFTTPPG 92 (407)
Q Consensus 83 ~--~~~F~T~p~ 92 (407)
+ .-.++|.|.
T Consensus 101 ~~~~~~~~T~P~ 112 (113)
T d1x5ia1 101 IPLYESAVTRPH 112 (113)
T ss_dssp CCCCCCEECCCC
T ss_pred CCeeeEEEeCCC
Confidence 2 235677664
|
| >d1bqua1 b.1.2.1 (A:5-99) Cytokine receptor gp130 cytokine-binding domains {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Cytokine receptor gp130 cytokine-binding domains species: Human (Homo sapiens) [TaxId: 9606]
Probab=85.00 E-value=0.23 Score=34.75 Aligned_cols=67 Identities=10% Similarity=-0.053 Sum_probs=37.7
Q ss_pred eeccCCCCCcEEEEEEcCCCCC---CCEEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCcC
Q 040421 3 ITQGDHEGKGVIVSWVTPDEPG---SNTVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGVG 79 (407)
Q Consensus 3 l~~g~~~~~~~~v~W~t~~~~~---~~~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~~ 79 (407)
|+....+.++|++.|.-..... ...|.|....+....... . ...-.....+.+|+|++.|++||...
T Consensus 10 ~~~~~~~~~si~~~W~p~~~~~~~~~y~v~~~~~~~~~~~~~~------~----~~~~~~~~~~~~L~~~~~Y~f~V~A~ 79 (95)
T d1bqua1 10 LSCIVNEGKKMRCEWDGGRETHLETNFTLKSEWATHKFADCKA------K----RDTPTSCTVDYSTVYFVNIEVWVEAE 79 (95)
T ss_dssp EEEEEETTSCCEEEEECCSCCSSCCEEEEEEEETTEECCCEEC------C----SSCTTEEECSSCCCTTSCEEEEEEEE
T ss_pred eEEEEccCCEEEEEEeCcccCCCceEEEEEEEEcccceeEeec------c----cccceeeeeeeecCCCcEEEEEEEEE
Confidence 3344445688999998865332 345556554332111110 0 01111223567999999999999763
|
| >d2dtge2 b.1.2.1 (E:593-807) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Insulin receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=80.50 E-value=0.5 Score=36.75 Aligned_cols=33 Identities=24% Similarity=0.192 Sum_probs=24.6
Q ss_pred EEEEEcCCCCCCEEEEEeCcC---------CceeeEEEEcCC
Q 040421 59 HHCTIEDLEFDTKYYYEVGVG---------NATRQFSFTTPP 91 (407)
Q Consensus 59 ~~~~l~gL~p~t~Y~Y~v~~~---------~~s~~~~F~T~p 91 (407)
...+|+||+|+|.|.++|..- ..+....|+|.|
T Consensus 155 ~~~~i~~L~p~t~Y~~~V~A~n~~~~~~~~s~s~~~~~rT~P 196 (196)
T d2dtge2 155 ESLVISGLRHFTGYRIELQACNQDTPEERCSVAAYVSARTMP 196 (196)
T ss_dssp SEEEECSSCSSCEEEECCEEESCSSSSCCBCCCCCEEEECCC
T ss_pred EEEEECCCCCCCEEEEEEEEEECCCCCCCccCcceEEeeCCC
Confidence 368899999999999999531 124556788875
|
| >d1fyhb1 b.1.2.1 (B:12-109) Interferon-gamma receptor alpha chain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Immunoglobulin-like beta-sandwich superfamily: Fibronectin type III family: Fibronectin type III domain: Interferon-gamma receptor alpha chain species: Human (Homo sapiens) [TaxId: 9606]
Probab=80.41 E-value=2.3 Score=29.20 Aligned_cols=61 Identities=13% Similarity=-0.007 Sum_probs=33.6
Q ss_pred CcEEEEEEcCCCCCCC--EEEEeecCCCCceEEEEEEEEEEecCCcceeEEEEEEcCCCCCCEEEEEeCc
Q 040421 11 KGVIVSWVTPDEPGSN--TVLYWAENSTLKQQAHGIVLTYNYFNYTSNCIHHCTIEDLEFDTKYYYEVGV 78 (407)
Q Consensus 11 ~~~~v~W~t~~~~~~~--~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~gL~p~t~Y~Y~v~~ 78 (407)
..++|.|.-+...+.. .+++-......+........ .........+.+|.+++.|.+||..
T Consensus 14 ~~~~L~W~pP~~~g~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~l~~~~~Y~fRV~A 76 (98)
T d1fyhb1 14 MNPIVYWEYQIMPQVPVFTVEVKNYGVKNSEWIDACIN-------ISHHYCNISDHVGDPSNSLWVRVKA 76 (98)
T ss_dssp SCCEEEEECCCCSSCCEEEEEEEETTCSSSCCEEEEEE-------ESSSEEECGGGCCSTTSCEEEEEEE
T ss_pred CcEEEEECCCCCCCCCceeEEEEEeccccceeEEeeee-------cccceeeeEecccCCCCEEEEEEEE
Confidence 4568999976543332 23333333222221111110 1223445678899999999999976
|