Citrus Sinensis ID: 040428

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-
MCPLPIKQPIAAQHSPILLMLKPAEVAYVALARRTISNTGTFGDIHIDVLSIQSTNGHNPGRAVTVPNFILLCGSEFVLQGLANGVVGIAGLGRSKVALPSQLVAFSLKRKFALYLSPFGNGVIIFSDGPYDLNFDVSNTASGFLGEPSVEYFIGVASVNVNGKAVPLNKTLLSIDNEGVDGAKINTVNPYTVLETSIYKAFVQAFANAMPKVTRVSPVAPSRACFRLQDIGFTRIRPFVPQIDLVLQNKNVVWRFVDGGVNPQTSIVIGGCQLENNLLQFDLATSRLDFSNSLLFEQTTCSNFNFTSNIA
cccccccccccccccccccccccccccccccccccccccEEEEEEEEEEEEEEccccccccccEEEccEEEEcccccccccccccccEEEcccccccccccccccccccEEEEEEccccccccEEEcccccccccccccccccccccccccEEEEEEEEEEccEEEccccccccccccccccEEEEcccccccccHHHHHHHHHHHHHHcccccccccccccccccccccccccEEccccccEEEEcccccEEEEEEEcccccccEEEEcHHHHcccEEEEEccccEEEEEcccccccccccccccccccc
cccccccccccccccccccccccccccccccccccccccccccccEEEEEEEEccccccccccEEcccEEEEEcccHHccccccccEEEEEccccccccHHHHHHcccccEEEEEEccccccEEEEccccccccccccccEccccccccccEEEEEEEEEEccEEEccccHHEEEccccccEEEEEccccEEEcccHHHHHHHHHHHHHHccccccccccccccEEccccccccccccccccEEEEEEccEEEEEEEccccccccEEEEEcccccccEEEEEccccEEEEcccccEccccccccccccccc
mcplpikqpiaaqhspillmlKPAEVAYVALARRTisntgtfgdiHIDVLSiqstnghnpgravtvpNFILLCGSEFVLQGLANgvvgiaglgrskvalpsQLVAFSLKRKFALylspfgngviifsdgpydlnfdvsntasgflgepsvEYFIGVASVnvngkavplnktllsidnegvdgakintvnpytvLETSIYKAFVQAFANampkvtrvspvapsracfrlqdigftrirpfvpqidlvlqnKNVVWRFvdggvnpqtsiVIGGCqlennllqfdlatsrldfsnsllfeqttcsnfnftsnia
MCPLPIKQPIAAQHSPILLMLKPAEVAYVALARRTISNTGTFGDIHIDVLSIQSTNGHNPGRAVTVPNFILLCGSEFVLQGLANGVVGIAGLGRSKVALPSQLVAFSLKRKFALYLSPFGNGVIIFSDGPYDLNFDVSNTASGFLGEPSVEYFIGVASVNVNGKAVPLNKTLLsidnegvdgaKINTVNPYTVLETSIYKAFVQAFANAMPKVTRVSPVAPSRACFRLQDIGFTRIRPFVPQIDLVLQNKNVVWRFVDGGVNPQTSIVIGGCQLENNLLQFDLATSRLDFSNSLLfeqttcsnfnftsnia
MCPLPIKQPIAAQHSPILLMLKPAEVAYVALARRTISNTGTFGDIHIDVLSIQSTNGHNPGRAVTVPNFILLCGSEFVLQGLANGVVGIAGLGRSKVALPSQLVAFSLKRKFALYLSPFGNGVIIFSDGPYDLNFDVSNTASGFLGEPSVEYFIGVASVNVNGKAVPLNKTLLSIDNEGVDGAKINTVNPYTVLETSIYKAFVQAFANAMPKVTRVSPVAPSRACFRLQDIGFTRIRPFVPQIDLVLQNKNVVWRFVDGGVNPQTSIVIGGCQLENNLLQFDLATSRLDFSNSLLFEQTTCSNFNFTSNIA
***********AQHSPILLMLKPAEVAYVALARRTISNTGTFGDIHIDVLSIQSTNGHNPGRAVTVPNFILLCGSEFVLQGLANGVVGIAGLGRSKVALPSQLVAFSLKRKFALYLSPFGNGVIIFSDGPYDLNFDVSNTASGFLGEPSVEYFIGVASVNVNGKAVPLNKTLLSIDNEGVDGAKINTVNPYTVLETSIYKAFVQAFANAMPKVTRVSPVAPSRACFRLQDIGFTRIRPFVPQIDLVLQNKNVVWRFVDGGVNPQTSIVIGGCQLENNLLQFDLATSRLDFSNSLLFEQTTCSNFNF*****
MCPLPIKQP**************AEVAYVALARRTISNTGTFGDIHIDVLSIQSTNGHNPGRAVTVPNFILLCGSEFVLQ**************SKVALPSQLVAFSLKRKFAL***********FSDGPYDL***********LGEPSVEYFIGVASVNVNGKAVPLNKTLLSIDNEGVDGAKINTVNPYTVLETSIYKAFVQAFANAMPK*****PVAPSRACFRLQDIGFTRIRPFVPQIDLVLQNKNVVWRFVDGGVNPQTSIVIGGCQLENNLLQFDLATSRLDFSNSLLFEQTTCSNFNFT****
MCPLPIKQPIAAQHSPILLMLKPAEVAYVALARRTISNTGTFGDIHIDVLSIQSTNGHNPGRAVTVPNFILLCGSEFVLQGLANGVVGIAGLGRSKVALPSQLVAFSLKRKFALYLSPFGNGVIIFSDGPYDLNFDVSNTASGFLGEPSVEYFIGVASVNVNGKAVPLNKTLLSIDNEGVDGAKINTVNPYTVLETSIYKAFVQAFANAMPKVTRVSPVAPSRACFRLQDIGFTRIRPFVPQIDLVLQNKNVVWRFVDGGVNPQTSIVIGGCQLENNLLQFDLATSRLDFSNSLLFEQTTCSNFNFTSNIA
MCPLPIKQPIAAQHSPILLMLKPAEVAYVALARRTISNTGTFGDIHIDVLSIQSTNGHNPGRAVTVPNFILLCGSEFVLQGLANGVVGIAGLGRSKVALPSQLVAFSLKRKFALYLSPFGNGVIIFSDGPYDLNFDVSNTASGFLGEPSVEYFIGVASVNVNGKAVPLNKTLLSIDNEGVDGAKINTVNPYTVLETSIYKAFVQAFANAMPKVTRVSPVAPSRACFRLQDIGFTRIRPFVPQIDLVLQNKNVVWRFVDGGVNPQTSIVIGGCQLENNLLQFDLATSRLDFSNSLLFEQTTCSNFNF*****
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MCPLPIKQPIAAQHSPILLMLKPAEVAYVALARRTISNTGTFGDIHIDVLSIQSTNGHNPGRAVTVPNFILLCGSEFVLQGLANGVVGIAGLGRSKVALPSQLVAFSLKRKFALYLSPFGNGVIIFSDGPYDLNFDVSNTASGFLGEPSVEYFIGVASVNVNGKAVPLNKTLLSIDNEGVDGAKINTVNPYTVLETSIYKAFVQAFANAMPKVTRVSPVAPSRACFRLQDIGFTRIRPFVPQIDLVLQNKNVVWRFVDGGVNPQTSIVIGGCQLENNLLQFDLATSRLDFSNSLLFEQTTCSNFNFTSNIA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query311 2.2.26 [Sep-21-2011]
P13917427 Basic 7S globulin OS=Glyc no no 0.868 0.632 0.348 1e-34
Q8RVH5433 Basic 7S globulin 2 OS=Gl no no 0.864 0.621 0.335 9e-32
Q766C2438 Aspartic proteinase nepen N/A no 0.684 0.486 0.25 0.0005
>sp|P13917|7SB1_SOYBN Basic 7S globulin OS=Glycine max GN=BG PE=1 SV=2 Back     alignment and function desciption
 Score =  147 bits (370), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 108/310 (34%), Positives = 152/310 (49%), Gaps = 40/310 (12%)

Query: 31  LARRTISNTGTFGDIHIDVLSIQSTNG--HNPGRAVTVPNFILLCGSEFVLQ-GLANGVV 87
           ++   I+     G++  DVL+I +T G     G  VTVP F+  C   F++Q GL     
Sbjct: 121 MSTNPITQQTGLGELGEDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSFLVQKGLPRNTQ 180

Query: 88  GIAGLGRSKVALPSQLVA-FSLKRKFALYLS--PFGNGVIIFSDGPYDL-NFDVSNTASG 143
           G+AGLG + ++LP+QL + F L+R+F   LS  P   G IIF D P ++  F   +    
Sbjct: 181 GVAGLGHAPISLPNQLASHFGLQRQFTTCLSRYPTSKGAIIFGDAPNNMRQFQNQDIFHD 240

Query: 144 FLGEPSV-----EYFIGVASVNVNGKAV-PLNKTLLSIDNEGVDGAKINTVNPYTVLETS 197
               P       EY + V S+ +N  +V PLNK   +I      G  I+T  P+ VL+ S
Sbjct: 241 LAFTPLTITLQGEYNVRVNSIRINQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQS 300

Query: 198 IYKAFVQAFANAMPKVTRVSPVAPSRACFRLQDIGFTRIRPFVPQIDLVLQNKN-VVWRF 256
           +Y+AF Q FA  +PK  +V  VAP   CF    I         P +DLV+   N  VWR 
Sbjct: 301 VYQAFTQVFAQQLPKQAQVKSVAPFGLCFNSNKIN------AYPSVDLVMDKPNGPVWRI 354

Query: 257 ------------------VDGGVNPQTSIVIGGCQLENNLLQFDLATSRLDFSNSLLFEQ 298
                             ++GG+ P+  I +G  QLE NL+ FDLA SR+ FS S L   
Sbjct: 355 SGEDLMVQAQPGVTCLGVMNGGMQPRAEITLGARQLEENLVVFDLARSRVGFSTSSLHSH 414

Query: 299 -TTCSN-FNF 306
              C++ FNF
Sbjct: 415 GVKCADLFNF 424
Seed storage protein. Has a protein kinase activity. Binds leginsulin.
Glycine max (taxid: 3847)
>sp|Q8RVH5|7SBG2_SOYBN Basic 7S globulin 2 OS=Glycine max PE=1 SV=1 Back     alignment and function description
>sp|Q766C2|NEP2_NEPGR Aspartic proteinase nepenthesin-2 OS=Nepenthes gracilis GN=nep2 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query311
225432542 435 PREDICTED: basic 7S globulin-like [Vitis 0.884 0.632 0.564 3e-85
255552241 434 basic 7S globulin 2 precursor small subu 0.897 0.642 0.533 7e-83
225436984 436 PREDICTED: basic 7S globulin [Vitis vini 0.897 0.639 0.537 3e-81
62362434 437 nectarin IV [Nicotiana langsdorffii x Ni 0.893 0.636 0.534 5e-81
224090425 416 predicted protein [Populus trichocarpa] 0.881 0.658 0.552 9e-81
147857949 436 hypothetical protein VITISV_038701 [Viti 0.897 0.639 0.534 1e-80
222822564 437 xyloglucan-specific endoglucanase inhibi 0.881 0.627 0.543 1e-80
350536487 438 xyloglucan-specific fungal endoglucanase 0.893 0.634 0.534 4e-80
32482806 437 putative xyloglucanase inhibitor [Solanu 0.893 0.636 0.530 5e-80
350536203 438 xyloglucan-specific fungal endoglucanase 0.893 0.634 0.531 5e-79
>gi|225432542|ref|XP_002277699.1| PREDICTED: basic 7S globulin-like [Vitis vinifera] Back     alignment and taxonomy information
 Score =  321 bits (822), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 176/312 (56%), Positives = 212/312 (67%), Gaps = 37/312 (11%)

Query: 35  TISNTGTFGDIHIDVLSIQSTNGHNPGRAVTVPNFILLCGSEFVLQGLANGVVGIAGLGR 94
           T++ T T G++  D +SIQST+G NPGR V+V   +  CGS F+L+GLA+ V G+AGLGR
Sbjct: 123 TVTGTATSGEVGEDAVSIQSTDGSNPGRVVSVRRLLFTCGSTFLLEGLASRVKGMAGLGR 182

Query: 95  SKVALPSQLV-AFSLKRKFALYLSPF--GNGVIIFSDGPY----------DLNFD----- 136
           S+VALPSQ   AFS  RKF++ LS      GV+ F DGPY           L +      
Sbjct: 183 SRVALPSQFSSAFSFNRKFSICLSSSTKSTGVVFFGDGPYVLLPKVDASQSLTYTPLITN 242

Query: 137 -VSNTASGFLGEPSVEYFIGVASVNVNGKAVPLNKTLLSIDNEGVDGAKINTVNPYTVLE 195
            VS  ++ F GE SVEYFIGV S+ +NGKAVPLN TLLSID++G  G KI+TV+PYTVLE
Sbjct: 243 PVSTASAYFQGEASVEYFIGVKSIKINGKAVPLNATLLSIDSQGYGGTKISTVHPYTVLE 302

Query: 196 TSIYKAFVQAFANAMPKVTRVSPVAPSRACFRLQDIGFTRIRPFVPQIDLVLQNKNVVWR 255
           TSIYKA  QAF   +  +TRV+ V+P  ACF  +DIG TR+ P VP IDLVLQ ++V WR
Sbjct: 303 TSIYKAVTQAFLKELSTITRVASVSPFGACFSSKDIGSTRVGPAVPPIDLVLQRQSVYWR 362

Query: 256 ------------------FVDGGVNPQTSIVIGGCQLENNLLQFDLATSRLDFSNSLLFE 297
                             FVDGGVNP+TSIVIGG QLE+NLLQFDLATSRL FS+SLL  
Sbjct: 363 VFGANSMVQVSDNVLCLGFVDGGVNPRTSIVIGGRQLEDNLLQFDLATSRLGFSSSLLSR 422

Query: 298 QTTCSNFNFTSN 309
           QTTCSNFNFTSN
Sbjct: 423 QTTCSNFNFTSN 434

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255552241|ref|XP_002517165.1| basic 7S globulin 2 precursor small subunit, putative [Ricinus communis] gi|223543800|gb|EEF45328.1| basic 7S globulin 2 precursor small subunit, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|225436984|ref|XP_002272235.1| PREDICTED: basic 7S globulin [Vitis vinifera] Back     alignment and taxonomy information
>gi|62362434|gb|AAX81588.1| nectarin IV [Nicotiana langsdorffii x Nicotiana sanderae] Back     alignment and taxonomy information
>gi|224090425|ref|XP_002308984.1| predicted protein [Populus trichocarpa] gi|222854960|gb|EEE92507.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|147857949|emb|CAN80378.1| hypothetical protein VITISV_038701 [Vitis vinifera] Back     alignment and taxonomy information
>gi|222822564|gb|ACM68431.1| xyloglucan-specific endoglucanase inhibitor protein [Capsicum annuum] Back     alignment and taxonomy information
>gi|350536487|ref|NP_001234249.1| xyloglucan-specific fungal endoglucanase inhibitor protein precursor [Solanum lycopersicum] gi|27372527|gb|AAN87262.1| xyloglucan-specific fungal endoglucanase inhibitor protein precursor [Solanum lycopersicum] Back     alignment and taxonomy information
>gi|32482806|gb|AAP84703.1| putative xyloglucanase inhibitor [Solanum tuberosum] Back     alignment and taxonomy information
>gi|350536203|ref|NP_001234746.1| xyloglucan-specific fungal endoglucanase inhibitor protein precursor [Solanum lycopersicum] gi|68449754|gb|AAY97864.1| xyloglucan-specific fungal endoglucanase inhibitor protein precursor [Solanum lycopersicum] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query311
TAIR|locus:2014475433 AT1G03220 [Arabidopsis thalian 0.549 0.394 0.497 1.4e-39
TAIR|locus:2014465434 AT1G03230 [Arabidopsis thalian 0.565 0.405 0.463 4.4e-36
TAIR|locus:2182187386 AT5G19120 [Arabidopsis thalian 0.752 0.606 0.358 4.9e-30
TAIR|locus:2166061406 AT5G48430 [Arabidopsis thalian 0.848 0.650 0.315 2.2e-27
TAIR|locus:2179614391 AT5G19100 [Arabidopsis thalian 0.643 0.511 0.364 2.6e-24
TAIR|locus:2182182405 AT5G19110 [Arabidopsis thalian 0.665 0.511 0.334 6.9e-24
TAIR|locus:2045615527 AT2G42980 [Arabidopsis thalian 0.794 0.468 0.248 1.3e-06
TAIR|locus:2183730474 AT5G10770 "AT5G10770" [Arabido 0.508 0.333 0.279 5.3e-06
TAIR|locus:2010786431 AT1G64830 [Arabidopsis thalian 0.803 0.580 0.258 7.6e-06
TAIR|locus:2031225483 AT1G25510 [Arabidopsis thalian 0.758 0.488 0.251 1.2e-05
TAIR|locus:2014475 AT1G03220 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 422 (153.6 bits), Expect = 1.4e-39, P = 1.4e-39
 Identities = 94/189 (49%), Positives = 121/189 (64%)

Query:    35 TISNTGTFGDIHIDVLSIQSTNGHNPGRAVTVPNFILLCGSEFVLQGLANGVVGIAGLGR 94
             T++ T T G+  +DV+SIQSTNG NPGR V +PN I  CG+ F+L+GLA G VG+AG+GR
Sbjct:   122 TVTGTATSGEFALDVVSIQSTNGSNPGRVVKIPNLIFDCGATFLLKGLAKGTVGMAGMGR 181

Query:    95 SKVALPSQLVA-FSLKRKFALYLSPFGNGVIIFSDGPYDL--NFDVSN------------ 139
               + LPSQ  A FS  RKFA+ L+  G GV  F +GPY       +S+            
Sbjct:   182 HNIGLPSQFAAAFSFHRKFAVCLTS-GKGVAFFGNGPYVFLPGIQISSLQTTPLLINPVS 240

Query:   140 TASGFL-GEPSVEYFIGVASVNVNGKAVPLNKTLLSID-NEGVDGAKINTVNPYTVLETS 197
             TAS F  GE S EYFIGV ++ +  K VP+N TLL I+ + G+ G KI++VNPYTVLE+S
Sbjct:   241 TASAFSQGEKSSEYFIGVTAIQIVEKTVPINPTLLKINASTGIGGTKISSVNPYTVLESS 300

Query:   198 IYKAFVQAF 206
             IY AF   F
Sbjct:   301 IYNAFTSEF 309
GO:0004190 "aspartic-type endopeptidase activity" evidence=IEA
GO:0005576 "extracellular region" evidence=ISM
GO:0006508 "proteolysis" evidence=IEA
GO:0005618 "cell wall" evidence=IDA
GO:0005886 "plasma membrane" evidence=IDA
GO:0016020 "membrane" evidence=IDA
GO:0009505 "plant-type cell wall" evidence=IDA
GO:0009651 "response to salt stress" evidence=IEP
GO:0005829 "cytosol" evidence=RCA
GO:0009506 "plasmodesma" evidence=IDA
GO:0005794 "Golgi apparatus" evidence=IDA
TAIR|locus:2014465 AT1G03230 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2182187 AT5G19120 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2166061 AT5G48430 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2179614 AT5G19100 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2182182 AT5G19110 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2045615 AT2G42980 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2183730 AT5G10770 "AT5G10770" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2010786 AT1G64830 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2031225 AT1G25510 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00023703001
SubName- Full=Chromosome chr7 scaffold_31, whole genome shotgun sequence; (436 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query311
cd05489362 cd05489, xylanase_inhibitor_I_like, TAXI-I inhibit 2e-91
cd05476265 cd05476, pepsin_A_like_plant, Chroloplast Nucleoid 5e-14
cd05472299 cd05472, cnd41_like, Chloroplast Nucleoids DNA-bin 3e-11
PLN03146431 PLN03146, PLN03146, aspartyl protease family prote 2e-07
cd05471283 cd05471, pepsin_like, Pepsin-like aspartic proteas 1e-06
>gnl|CDD|133156 cd05489, xylanase_inhibitor_I_like, TAXI-I inhibits degradation of xylan in the cell wall Back     alignment and domain information 
 Score =  276 bits (707), Expect = 2e-91
 Identities = 128/294 (43%), Positives = 163/294 (55%), Gaps = 30/294 (10%)

Query: 30  ALARRTISNTGTFGDIHIDVLSIQSTNGHNPGRAVTVPNFILLCGSEFVLQGLANGVVGI 89
           A     ++     GD+  DVLS  +T+G NP   V + NF+  C    +L+GL  G  G+
Sbjct: 70  AHPYNPVTGECATGDLTQDVLSANTTDGSNPL-LVVIFNFVFSCAPSLLLKGLPPGAQGV 128

Query: 90  AGLGRSKVALPSQLVA-FSLKRKFALYLS--PFGNGVIIFSDGPYDL---NFDVSNTAS- 142
           AGLGRS ++LP+QL + F + RKFAL L   P G GV IF  GPY L     D+S + S 
Sbjct: 129 AGLGRSPLSLPAQLASAFGVARKFALCLPSSPGGPGVAIFGGGPYYLFPPPIDLSKSLSY 188

Query: 143 ---GFLGEPSVEYFIGVASVNVNGKAVPLNKTLLSIDNEGVDGAKINTVNPYTVLETSIY 199
                    S EY+IGV S+ VNG AVPLN TL + D  G  G K++TV PYTVL + IY
Sbjct: 189 TPLLTNPRKSGEYYIGVTSIAVNGHAVPLNPTLSANDRLGPGGVKLSTVVPYTVLRSDIY 248

Query: 200 KAFVQAFANAMPKVTRVSPVAPSRA-CFRLQDIGFTRIRPFVPQIDLVLQNKNVVWR--- 255
           +AF QAFA A  ++ RV   A     C+    +G TR+   VP IDLVL    V W    
Sbjct: 249 RAFTQAFAKATARIPRVPAAAVFPELCYPASALGNTRLGYAVPAIDLVLDGGGVNWTIFG 308

Query: 256 ---------------FVDGGVNPQTSIVIGGCQLENNLLQFDLATSRLDFSNSL 294
                          FVDGG  P+ ++VIGG Q+E+NLL FDL  SRL FS+SL
Sbjct: 309 ANSMVQVKGGVACLAFVDGGSEPRPAVVIGGHQMEDNLLVFDLEKSRLGFSSSL 362

Xylanase inhibitor-I (TAXI-I) is a member of potent TAXI-type inhibitors of fungal and bacterial family 11 xylanases. Plants developed a diverse battery of defense mechanisms in response to continual challenges by a broad spectrum of pathogenic microorganisms. Their defense arsenal includes inhibitors of cell wall-degrading enzymes, which hinder a possible invasion and colonization by antagonists. Xylanases of fungal and bacterial pathogens are the key enzymes in the degradation of xylan in the cell wall. Plants secrete proteins that inhibit these degradation glycosidases, including xylanase. Surprisingly, TAXI-I displays structural homology with the pepsin-like family of aspartic proteases but is proteolytically nonfunctional, because one or more residues of the essential catalytic triad are absent. The structure of the TAXI-inhibitor, Aspergillus niger xylanase I complex, illustrates the ability of tight binding and inhibition with subnanomolar affinity and indicates the importance of the C-terminal end for the differences in xylanase specificity among different TAXI-type inhibitors. This family also contains pepsin-like aspartic proteinases homologous to TAXI-I. Unlike TAXI-I, they have active site aspartates and are functionally active. This family of aspartate proteases is classified by MEROPS as the peptidase family A1 (pepsin A, clan AA). Length = 362
>gnl|CDD|133143 cd05476, pepsin_A_like_plant, Chroloplast Nucleoids DNA-binding Protease and Nucellin, pepsin-like aspartic proteases from plants Back     alignment and domain information
>gnl|CDD|133139 cd05472, cnd41_like, Chloroplast Nucleoids DNA-binding Protease, catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase Back     alignment and domain information
>gnl|CDD|178691 PLN03146, PLN03146, aspartyl protease family protein; Provisional Back     alignment and domain information
>gnl|CDD|133138 cd05471, pepsin_like, Pepsin-like aspartic proteases, bilobal enzymes that cleave bonds in peptides at acidic pH Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 311
cd05489362 xylanase_inhibitor_I_like TAXI-I inhibits degradat 100.0
PLN03146431 aspartyl protease family protein; Provisional 100.0
cd05472299 cnd41_like Chloroplast Nucleoids DNA-binding Prote 100.0
KOG1339398 consensus Aspartyl protease [Posttranslational mod 100.0
cd05490325 Cathepsin_D2 Cathepsin_D2, pepsin family of protei 100.0
cd05476265 pepsin_A_like_plant Chroloplast Nucleoids DNA-bind 100.0
cd05475273 nucellin_like Nucellins, plant aspartic proteases 100.0
cd06096326 Plasmepsin_5 Plasmepsins are a class of aspartic p 100.0
cd05478317 pepsin_A Pepsin A, aspartic protease produced in g 100.0
cd05477318 gastricsin Gastricsins, asparate proteases produce 100.0
cd05486316 Cathespin_E Cathepsin E, non-lysosomal aspartic pr 100.0
cd05488320 Proteinase_A_fungi Fungal Proteinase A , aspartic 100.0
cd05485329 Cathepsin_D_like Cathepsin_D_like, pepsin family o 100.0
PTZ00165482 aspartyl protease; Provisional 100.0
cd05474295 SAP_like SAPs, pepsin-like proteinases secreted fr 100.0
cd05473364 beta_secretase_like Beta-secretase, aspartic-acid 100.0
cd06097278 Aspergillopepsin_like Aspergillopepsin_like, aspar 100.0
cd05487326 renin_like Renin stimulates production of angioten 100.0
cd06098317 phytepsin Phytepsin, a plant homolog of mammalian 100.0
cd05471283 pepsin_like Pepsin-like aspartic proteases, biloba 99.97
PTZ00147453 plasmepsin-1; Provisional 99.97
PTZ00013450 plasmepsin 4 (PM4); Provisional 99.97
PF14541161 TAXi_C: Xylanase inhibitor C-terminal; PDB: 3AUP_D 99.95
PF00026317 Asp: Eukaryotic aspartyl protease The Prosite entr 99.94
PF14543164 TAXi_N: Xylanase inhibitor N-terminal; PDB: 3HD8_A 99.78
cd05470109 pepsin_retropepsin_like Cellular and retroviral pe 98.27
cd05479124 RP_DDI RP_DDI; retropepsin-like domain of DNA dama 93.88
TIGR02281121 clan_AA_DTGA clan AA aspartic protease, TIGR02281 88.55
PF1365090 Asp_protease_2: Aspartyl protease 87.44
PF08284135 RVP_2: Retroviral aspartyl protease; InterPro: IPR 86.65
cd0548491 retropepsin_like_LTR_2 Retropepsins_like_LTR, peps 85.21
PF1397572 gag-asp_proteas: gag-polyprotein putative aspartyl 85.21
cd0548396 retropepsin_like_bacteria Bacterial aspartate prot 80.74
>cd05489 xylanase_inhibitor_I_like TAXI-I inhibits degradation of xylan in the cell wall Back     alignment and domain information 
Probab=100.00  E-value=1.6e-45  Score=349.26  Aligned_cols=266  Identities=46%  Similarity=0.726  Sum_probs=195.6

Q ss_pred             CCcccceeeecCCceEEEEEEEEEEEeecCCCCCCCcceeeCcEEEEeeecccccCCCCCcceEEeeCCCCCChHHHHh-
Q 040428           26 VAYVALARRTISNTGTFGDIHIDVLSIQSTNGHNPGRAVTVPNFILLCGSEFVLQGLANGVVGIAGLGRSKVALPSQLV-  104 (311)
Q Consensus        26 ~~C~~~~~~~~~gs~~~G~l~~D~v~~~~~~g~~~~~~~~v~~~~FGc~~~~~~~~~~~~~~GIlGLg~~~~Sl~~ql~-  104 (311)
                      ++|.|..+...+|+.++|.|++|+|+|+..+|.... ...++++.|||++.+.+.+++...+||||||++++|+++||. 
T Consensus        66 ~~C~y~~~~y~~gs~t~G~l~~Dtl~~~~~~g~~~~-~~~~~~~~FGC~~~~~~~~~~~~~dGIlGLg~~~lSl~sql~~  144 (362)
T cd05489          66 NTCTAHPYNPVTGECATGDLTQDVLSANTTDGSNPL-LVVIFNFVFSCAPSLLLKGLPPGAQGVAGLGRSPLSLPAQLAS  144 (362)
T ss_pred             CcCeeEccccccCcEeeEEEEEEEEEecccCCCCcc-cceeCCEEEEcCCcccccCCccccccccccCCCccchHHHhhh
Confidence            357775442237889999999999999875432111 136889999999987433445568999999999999999998 


Q ss_pred             hccCCCcEEeccCCC--CcceEEEcCCCCCC--------CCcceeeeeecCCCCCcceEEEEEEEEEcceEeecCccccc
Q 040428          105 AFSLKRKFALYLSPF--GNGVIIFSDGPYDL--------NFDVSNTASGFLGEPSVEYFIGVASVNVNGKAVPLNKTLLS  174 (311)
Q Consensus       105 ~~gl~~~FS~cL~~~--~~G~l~fG~~d~~~--------~~~~s~~lt~~~~~~~~~Y~V~l~gIsvg~~~l~~~~~~~~  174 (311)
                      +++.+++|||||++.  .+|+|+||+.+...        +.-..+|| +.+|....+|+|+|++|+||++++.+++..+.
T Consensus       145 ~~~~~~~FS~CL~~~~~~~g~l~fG~~~~~~~~~~~~~~~~~~~tPl-~~~~~~~~~Y~v~l~~IsVg~~~l~~~~~~~~  223 (362)
T cd05489         145 AFGVARKFALCLPSSPGGPGVAIFGGGPYYLFPPPIDLSKSLSYTPL-LTNPRKSGEYYIGVTSIAVNGHAVPLNPTLSA  223 (362)
T ss_pred             hcCCCcceEEEeCCCCCCCeeEEECCCchhcccccccccCCcccccc-ccCCCCCCceEEEEEEEEECCEECCCCchhcc
Confidence            444568999999875  58999999987421        10011344 44433467999999999999999988777665


Q ss_pred             ccCCCCCcEEEecCCcccccCHHHHHHHHHHHHhhCCCccccCCC-CCCcceeeecCCCccccCCCCCeEEEEEcC-Cce
Q 040428          175 IDNEGVDGAKINTVNPYTVLETSIYKAFVQAFANAMPKVTRVSPV-APSRACFRLQDIGFTRIRPFVPQIDLVLQN-KNV  252 (311)
Q Consensus       175 ~~~~g~~~~iiDSGTt~t~lp~~~y~~l~~~~~~~~~~~~~~~~~-~~~~~C~~~~~~~~~~~~~~~P~i~~~f~g-~~~  252 (311)
                      ++.++.+++||||||++|+||+++|++|+++|.+++......... ...++||+............+|.|+|+|++ + +
T Consensus       224 ~~~~~~~g~iiDSGTs~t~lp~~~y~~l~~a~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~it~~f~g~g-~  302 (362)
T cd05489         224 NDRLGPGGVKLSTVVPYTVLRSDIYRAFTQAFAKATARIPRVPAAAVFPELCYPASALGNTRLGYAVPAIDLVLDGGG-V  302 (362)
T ss_pred             ccccCCCcEEEecCCceEEECHHHHHHHHHHHHHHhcccCcCCCCCCCcCccccCCCcCCcccccccceEEEEEeCCC-e
Confidence            555567899999999999999999999999999887633222221 123799986532211112579999999997 4 4


Q ss_pred             EEE------eec--CC-----CC-----CCcceeeccceeeceEEEEECCCCEEEEEecC
Q 040428          253 VWR------FVD--GG-----VN-----PQTSIVIGGCQLENNLLQFDLATSRLDFSNSL  294 (311)
Q Consensus       253 ~l~------~~~--~G-----~~-----~~~~~ILG~~~~r~~~vvfDl~~~riGFa~~~  294 (311)
                      .|.      +++  .+     +.     +.+.||||++|||+++||||++++|||||++|
T Consensus       303 ~~~l~~~ny~~~~~~~~~Cl~f~~~~~~~~~~~IlG~~~~~~~~vvyD~~~~riGfa~~~  362 (362)
T cd05489         303 NWTIFGANSMVQVKGGVACLAFVDGGSEPRPAVVIGGHQMEDNLLVFDLEKSRLGFSSSL  362 (362)
T ss_pred             EEEEcCCceEEEcCCCcEEEEEeeCCCCCCceEEEeeheecceEEEEECCCCEeecccCC
Confidence            444      222  11     11     13579999999999999999999999999764

Xylanase inhibitor-I (TAXI-I) is a member of potent TAXI-type inhibitors of fungal and bacterial family 11 xylanases. Plants developed a diverse battery of defense mechanisms in response to continual challenges by a broad spectrum of pathogenic microorganisms. Their defense arsenal includes inhibitors of cell wall-degrading enzymes, which hinder a possible invasion and colonization by antagonists. Xylanases of fungal and bacterial pathogens are the key enzymes in the degradation of xylan in the cell wall. Plants secrete proteins that inhibit these degradation glycosidases, including xylanase. Surprisingly, TAXI-I displays structural homology with the pepsin-like family of aspartic proteases but is proteolytically nonfunctional, because one or more residues of the essential catalytic triad are absent. The structure of the TAXI-inhibitor, Aspergillus niger xylanase I complex, illustrates the ability
>PLN03146 aspartyl protease family protein; Provisional Back     alignment and domain information
>cd05472 cnd41_like Chloroplast Nucleoids DNA-binding Protease, catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase Back     alignment and domain information
>KOG1339 consensus Aspartyl protease [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd05490 Cathepsin_D2 Cathepsin_D2, pepsin family of proteinases Back     alignment and domain information
>cd05476 pepsin_A_like_plant Chroloplast Nucleoids DNA-binding Protease and Nucellin, pepsin-like aspartic proteases from plants Back     alignment and domain information
>cd05475 nucellin_like Nucellins, plant aspartic proteases specifically expressed in nucellar cells during degradation Back     alignment and domain information
>cd06096 Plasmepsin_5 Plasmepsins are a class of aspartic proteinases produced by the plasmodium parasite Back     alignment and domain information
>cd05478 pepsin_A Pepsin A, aspartic protease produced in gastric mucosa of mammals Back     alignment and domain information
>cd05477 gastricsin Gastricsins, asparate proteases produced in gastric mucosa Back     alignment and domain information
>cd05486 Cathespin_E Cathepsin E, non-lysosomal aspartic protease Back     alignment and domain information
>cd05488 Proteinase_A_fungi Fungal Proteinase A , aspartic proteinase superfamily Back     alignment and domain information
>cd05485 Cathepsin_D_like Cathepsin_D_like, pepsin family of proteinases Back     alignment and domain information
>PTZ00165 aspartyl protease; Provisional Back     alignment and domain information
>cd05474 SAP_like SAPs, pepsin-like proteinases secreted from pathogens to degrade host proteins Back     alignment and domain information
>cd05473 beta_secretase_like Beta-secretase, aspartic-acid protease important in the pathogenesis of Alzheimer's disease Back     alignment and domain information
>cd06097 Aspergillopepsin_like Aspergillopepsin_like, aspartic proteases of fungal origin Back     alignment and domain information
>cd05487 renin_like Renin stimulates production of angiotensin and thus affects blood pressure Back     alignment and domain information
>cd06098 phytepsin Phytepsin, a plant homolog of mammalian lysosomal pepsins Back     alignment and domain information
>cd05471 pepsin_like Pepsin-like aspartic proteases, bilobal enzymes that cleave bonds in peptides at acidic pH Back     alignment and domain information
>PTZ00147 plasmepsin-1; Provisional Back     alignment and domain information
>PTZ00013 plasmepsin 4 (PM4); Provisional Back     alignment and domain information
>PF14541 TAXi_C: Xylanase inhibitor C-terminal; PDB: 3AUP_D 3HD8_A 1T6G_A 1T6E_X 2B42_A 3VLB_A 3VLA_A Back     alignment and domain information
>PF00026 Asp: Eukaryotic aspartyl protease The Prosite entry also includes Pfam:PF00077 Back     alignment and domain information
>PF14543 TAXi_N: Xylanase inhibitor N-terminal; PDB: 3HD8_A 3VLB_A 3VLA_A 3AUP_D 1T6G_A 1T6E_X 2B42_A Back     alignment and domain information
>cd05470 pepsin_retropepsin_like Cellular and retroviral pepsin-like aspartate proteases Back     alignment and domain information
>cd05479 RP_DDI RP_DDI; retropepsin-like domain of DNA damage inducible protein Back     alignment and domain information
>TIGR02281 clan_AA_DTGA clan AA aspartic protease, TIGR02281 family Back     alignment and domain information
>PF13650 Asp_protease_2: Aspartyl protease Back     alignment and domain information
>PF08284 RVP_2: Retroviral aspartyl protease; InterPro: IPR013242 This region defines single domain aspartyl proteases from retroviruses, retrotransposons, and badnaviruses (plant dsDNA viruses) Back     alignment and domain information
>cd05484 retropepsin_like_LTR_2 Retropepsins_like_LTR, pepsin-like aspartate proteases Back     alignment and domain information
>PF13975 gag-asp_proteas: gag-polyprotein putative aspartyl protease Back     alignment and domain information
>cd05483 retropepsin_like_bacteria Bacterial aspartate proteases, retropepsin-like protease family Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query311
3vla_A413 Crystal Structure Of Edgp Length = 413 5e-76
3vlb_A413 Crystal Structure Of Xeg-Edgp Length = 413 6e-76
3aup_A403 Crystal Structure Of Basic 7s Globulin From Soybean 1e-35
3hd8_A389 Crystal Structure Of The Triticum Aestivum Xylanase 3e-21
1t6e_X381 Crystal Structure Of The Triticum Aestivum Xylanase 1e-14
2b42_A381 Crystal Structure Of The Triticum Xylanse Inhibitor 5e-11
>pdb|3VLA|A Chain A, Crystal Structure Of Edgp Length = 413 Back     alignment and structure 
Iteration: 1

 Score =  280 bits (717), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 162/311 (52%), Positives = 202/311 (64%), Gaps = 40/311 (12%)
Query: 38  NTGTFGDIHIDVLSIQSTNGHNPGRAVTVPNFILLCGSEFVLQGLANGVVGIAGLGRSKV 97
           NT T G++  DV+S++ST+G + GR VTVP FI  C    +LQ LA+GVVG+AGLGR+++
Sbjct: 103 NTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQNLASGVVGMAGLGRTRI 162
Query: 98  ALPSQLV-AFSLKRKFALYLS--PFGNGVIIFSDGPYD-----------------LNFDV 137
           ALPSQ   AFS KRKFA+ LS     N VIIF + PY                  L   V
Sbjct: 163 ALPSQFASAFSFKRKFAMCLSGSTSSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPV 222
Query: 138 SNTASGFLGEPSVEYFIGVASVNVNGKAVPLNKTLLSIDNEGVDGAKINTVNPYTVLETS 197
           S +A+   GEPSVEYFIGV S+ +N K V LN +LLSI + G+ G KI+T+NPYTVLETS
Sbjct: 223 STSATSTQGEPSVEYFIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETS 282
Query: 198 IYKAFVQAF--ANAMPKVTRVSPVAPSRACFRLQDIGFTRIRPFVPQIDLVLQNKNVVWR 255
           IYKA  +AF   +A   +TRV+ VAP  ACF   +I  TR+ P VP IDLVLQ+++VVW 
Sbjct: 283 IYKAVTEAFIKESAARNITRVASVAPFGACFSTDNILSTRLGPSVPSIDLVLQSESVVWT 342
Query: 256 F------------------VDGGVNPQTSIVIGGCQLENNLLQFDLATSRLDFSNSLLFE 297
                              VDGG N +TSIVIGG QLE+NL+QFDLATSR+ FS +LL  
Sbjct: 343 ITGSNSMVYINDNVVCLGVVDGGSNLRTSIVIGGHQLEDNLVQFDLATSRVGFSGTLLGS 402
Query: 298 QTTCSNFNFTS 308
           +TTC+NFNFTS
Sbjct: 403 RTTCANFNFTS 413
>pdb|3VLB|A Chain A, Crystal Structure Of Xeg-Edgp Length = 413 Back     alignment and structure
>pdb|3AUP|A Chain A, Crystal Structure Of Basic 7s Globulin From Soybean Length = 403 Back     alignment and structure
>pdb|3HD8|A Chain A, Crystal Structure Of The Triticum Aestivum Xylanase Inhibitor-Iia In Complex With Bacillus Subtilis Xylanase Length = 389 Back     alignment and structure
>pdb|1T6E|X Chain X, Crystal Structure Of The Triticum Aestivum Xylanase Inhibitor I Length = 381 Back     alignment and structure
>pdb|2B42|A Chain A, Crystal Structure Of The Triticum Xylanse Inhibitor-I In Complex With Bacillus Subtilis Xylanase Length = 381 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query311
3vla_A413 EDGP; extracellular, inhibitor, plant protein; HET 7e-59
3aup_A403 SBG7S, BG, basic 7S globulin; pepsin-like fold, pl 1e-47
1t6e_X381 Xylanase inhibitor; two beta-barrel domain structu 5e-43
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A Length = 413 Back     alignment and structure
 Score =  193 bits (491), Expect = 7e-59
 Identities = 154/311 (49%), Positives = 195/311 (62%), Gaps = 40/311 (12%)

Query: 38  NTGTFGDIHIDVLSIQSTNGHNPGRAVTVPNFILLCGSEFVLQGLANGVVGIAGLGRSKV 97
           NT T G++  DV+S++ST+G + GR VTVP FI  C    +LQ LA+GVVG+AGLGR+++
Sbjct: 103 NTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQNLASGVVGMAGLGRTRI 162

Query: 98  ALPSQLVA-FSLKRKFALYLSPF--GNGVIIFSDGPYDLNFDVSNTASGFLGEP------ 148
           ALPSQ  + FS KRKFA+ LS     N VIIF + PY    ++  +       P      
Sbjct: 163 ALPSQFASAFSFKRKFAMCLSGSTSSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPV 222

Query: 149 -----------SVEYFIGVASVNVNGKAVPLNKTLLSIDNEGVDGAKINTVNPYTVLETS 197
                      SVEYFIGV S+ +N K V LN +LLSI + G+ G KI+T+NPYTVLETS
Sbjct: 223 STSATSTQGEPSVEYFIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETS 282

Query: 198 IYKAFVQAFANAM--PKVTRVSPVAPSRACFRLQDIGFTRIRPFVPQIDLVLQNKNVVWR 255
           IYKA  +AF        +TRV+ VAP  ACF   +I  TR+ P VP IDLVLQ+++VVW 
Sbjct: 283 IYKAVTEAFIKESAARNITRVASVAPFGACFSTDNILSTRLGPSVPSIDLVLQSESVVWT 342

Query: 256 ------------------FVDGGVNPQTSIVIGGCQLENNLLQFDLATSRLDFSNSLLFE 297
                              VDGG N +TSIVIGG QLE+NL+QFDLATSR+ FS +LL  
Sbjct: 343 ITGSNSMVYINDNVVCLGVVDGGSNLRTSIVIGGHQLEDNLVQFDLATSRVGFSGTLLGS 402

Query: 298 QTTCSNFNFTS 308
           +TTC+NFNFTS
Sbjct: 403 RTTCANFNFTS 413
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max} Length = 403 Back     alignment and structure
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A Length = 381 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query311
3vla_A413 EDGP; extracellular, inhibitor, plant protein; HET 100.0
3aup_A403 SBG7S, BG, basic 7S globulin; pepsin-like fold, pl 100.0
1t6e_X381 Xylanase inhibitor; two beta-barrel domain structu 100.0
2qzx_A342 Candidapepsin-5; aspartic proteinase, aspartyl pro 100.0
1j71_A334 Candidapepsin, aspartic proteinase; candida tropic 100.0
1tzs_A351 Cathepsin E; hydrolase, aspartic protease, activat 100.0
3cms_A323 Chymosin B; hydrolase, acid proteinase; 2.00A {Bos 100.0
2apr_A325 Rhizopuspepsin; hydrolase (aspartic proteinase); 1 100.0
4aa9_A320 Chymosin; hydrolase, aspartic peptidase, rennet; H 100.0
3fv3_A339 SAPP1P-secreted aspartic protease 1; secreted aspa 100.0
1dpj_A329 Proteinase A; proteinase A, hydrolase-hydrolase in 100.0
2x0b_A383 Renin; hydrolase-hormone complex, hydrolase hormon 100.0
1htr_B329 Gastricsin; aspartyl protease; 1.62A {Homo sapiens 100.0
1mpp_A361 Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomu 100.0
3pvk_A342 Candidapepsin-2; hydrolase; 1.27A {Candida albican 100.0
1am5_A324 Pepsin, acid proteinase; aspartyl protease, hydrol 100.0
3psg_A370 Pepsinogen; hydrolase(acid proteinase zymogen); 1. 100.0
3k1w_A341 Renin; protease, alternative splicing, aspartyl pr 100.0
1oew_A329 Endothiapepsin; hydrolase, aspartic proteinase mec 100.0
3c9x_A329 Trichoderma reesei aspartic protease; aspartic pro 100.0
2qp8_A395 Beta-secretase 1; BACE1, protease, alternative spl 100.0
1ibq_A325 Aspergillopepsin; aspartic proteinase, hydrolase; 100.0
1yg9_A330 Aspartic protease BLA G 2; allegren, hydrolase, al 100.0
2ewy_A383 Beta-secretase 2; BACE2, aspartic protease, hydrol 100.0
1izd_A323 Aspartic proteinase; sugar binding, acid protease, 100.0
3lpj_A455 Beta-secretase 1; alzheimer'S, aspartyl protease, 100.0
1qdm_A478 Prophytepsin; aspartic proteinases, saposin-like d 100.0
3vf3_A402 Beta-secretase 1; structure-based drug design, hyd 100.0
1miq_A375 Plasmepsin; aspartic proteinase zymogen, domain op 100.0
1bxo_A323 Protein (penicillopepsin); hydrolase, phosphonate 100.0
1wkr_A340 Polyporopepsin; hydrolase, hydrolase-hydrolase inh 100.0
2bju_A453 Plasmepsin II; aspartic proteinase, drug design, m 100.0
1lya_B241 Cathepsin D; lysosomal aspartic protease; HET: NAG 100.0
3qvc_A451 Histo-aspartic protease; HAP, plasmepsin, zymogen, 100.0
1b5f_A239 Protein (cardosin A); hydrolase, aspartic proteina 99.93
1b5f_B87 Protein (cardosin A); hydrolase, aspartic proteina 98.98
1lya_A97 Cathepsin D; lysosomal aspartic protease; HET: NAG 94.61
2i1a_A148 DNA damage-inducible protein DDI1; acid protease f 90.71
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A Back     alignment and structure
Probab=100.00  E-value=2.2e-50  Score=387.84  Aligned_cols=282  Identities=54%  Similarity=0.805  Sum_probs=219.6

Q ss_pred             CCcccceeeecCCceEEEEEEEEEEEeecCCCCCCCcceeeCcEEEEeeecccccCCCCCcceEEeeCCCCCChHHHHhh
Q 040428           26 VAYVALARRTISNTGTFGDIHIDVLSIQSTNGHNPGRAVTVPNFILLCGSEFVLQGLANGVVGIAGLGRSKVALPSQLVA  105 (311)
Q Consensus        26 ~~C~~~~~~~~~gs~~~G~l~~D~v~~~~~~g~~~~~~~~v~~~~FGc~~~~~~~~~~~~~~GIlGLg~~~~Sl~~ql~~  105 (311)
                      ..|.|...|..++++++|+|++|+|+|++.+|...+..+.++++.|||++.+.+.+++...+||||||++++|+++||+.
T Consensus        91 ~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~g~~~~~dGIlGLg~~~lSl~sql~~  170 (413)
T 3vla_A           91 NTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQNLASGVVGMAGLGRTRIALPSQFAS  170 (413)
T ss_dssp             SEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGTTSCTTCCEEEECSSSSSSHHHHHHH
T ss_pred             CcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCEEEECcccccccCcccccccccccCCCCcchHHHHhh
Confidence            45787777655789999999999999987554332234688999999999874445566789999999999999999994


Q ss_pred             cc-CCCcEEeccCCC--CcceEEEcCCCCC--CCCcce------eeeeecCCCC----------CcceEEEEEEEEEcce
Q 040428          106 FS-LKRKFALYLSPF--GNGVIIFSDGPYD--LNFDVS------NTASGFLGEP----------SVEYFIGVASVNVNGK  164 (311)
Q Consensus       106 ~g-l~~~FS~cL~~~--~~G~l~fG~~d~~--~~~~~s------~~lt~~~~~~----------~~~Y~V~l~gIsvg~~  164 (311)
                      ++ ++++|||||++.  .+|+|+||+.|..  ++.+++      +|| +.++..          ..+|+|+|++|+||++
T Consensus       171 ~~~i~~~FS~cL~~~~~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl-~~~~~~~~~~~~~~~~~~~y~V~l~~IsVgg~  249 (413)
T 3vla_A          171 AFSFKRKFAMCLSGSTSSNSVIIFGNDPYTFLPNIIVSDKTLTYTPL-LTNPVSTSATSTQGEPSVEYFIGVKSIKINSK  249 (413)
T ss_dssp             HHTCCSEEEEECCSCSSSCEEEEEESCCEEETTTEEECTTTSEEEEC-BCCSSCCSSSCCTTCCCCSCEECCCEEEETTE
T ss_pred             hcCCCceEEEeCCCCCCCceEEEECCCcccccccccccCCceeEeec-ccCCccccccccccCCCceEEEEEEEEEECCE
Confidence            43 479999999984  6899999998752  221222      344 333221          2799999999999999


Q ss_pred             EeecCcccccccCCCCCcEEEecCCcccccCHHHHHHHHHHHHhhCC--CccccCCCCCCcceeeecCCCccccCCCCCe
Q 040428          165 AVPLNKTLLSIDNEGVDGAKINTVNPYTVLETSIYKAFVQAFANAMP--KVTRVSPVAPSRACFRLQDIGFTRIRPFVPQ  242 (311)
Q Consensus       165 ~l~~~~~~~~~~~~g~~~~iiDSGTt~t~lp~~~y~~l~~~~~~~~~--~~~~~~~~~~~~~C~~~~~~~~~~~~~~~P~  242 (311)
                      .+.+++..|.+++++.+++|||||||+|+||+++|++|+++|.+++.  ++++++....++.||+.+....++....+|+
T Consensus       250 ~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~lP~  329 (413)
T 3vla_A          250 IVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESAARNITRVASVAPFGACFSTDNILSTRLGPSVPS  329 (413)
T ss_dssp             EECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHHHHHTTCCEECCCTTCSCEEECTTCCEETTEECCCC
T ss_pred             EccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHHhcccCCCcCCCCCCCcceeccCCccccccccCCCc
Confidence            99998888887766778999999999999999999999999998864  4555444445789999764321112247999


Q ss_pred             EEEEEcCCceEEE------ee--cCC-----CC-----CCcceeeccceeeceEEEEECCCCEEEEEecCCCCCCCCCCC
Q 040428          243 IDLVLQNKNVVWR------FV--DGG-----VN-----PQTSIVIGGCQLENNLLQFDLATSRLDFSNSLLFEQTTCSNF  304 (311)
Q Consensus       243 i~~~f~g~~~~l~------~~--~~G-----~~-----~~~~~ILG~~~~r~~~vvfDl~~~riGFa~~~~~~~~~C~~~  304 (311)
                      |+|+|+|+++.|.      ++  +.+     +.     ..+.||||++|||++|+|||++++|||||++++.++++|+++
T Consensus       330 i~f~f~g~~~~~~l~~~~y~~~~~~~~~Cl~~~~~~~~~~~~~IlGd~fl~~~~vvfD~~~~riGfa~~~~~~~~~c~~~  409 (413)
T 3vla_A          330 IDLVLQSESVVWTITGSNSMVYINDNVVCLGVVDGGSNLRTSIVIGGHQLEDNLVQFDLATSRVGFSGTLLGSRTTCANF  409 (413)
T ss_dssp             EEEECSSTTCEEEECHHHHEEEEETTEEEECEEEEESSCSSSEEECHHHHTTEEEEEETTTTEEEEEEEGGGGTCCGGGS
T ss_pred             EEEEEcCCcEEEEeCccceEEEeCCCcEEEEEEecCCCcccceeEehhhhcCeEEEEECCCCEEEEEEecccCcccccCc
Confidence            9999998434444      22  222     11     135899999999999999999999999999999999999999


Q ss_pred             cCcc
Q 040428          305 NFTS  308 (311)
Q Consensus       305 ~~~~  308 (311)
                      +|++
T Consensus       410 ~~~~  413 (413)
T 3vla_A          410 NFTS  413 (413)
T ss_dssp             BCCC
T ss_pred             CCCC
Confidence            9974
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max} Back     alignment and structure
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A Back     alignment and structure
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans} Back     alignment and structure
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2 Back     alignment and structure
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens} Back     alignment and structure
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A Back     alignment and structure
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A Back     alignment and structure
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A Back     alignment and structure
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A* Back     alignment and structure
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A* Back     alignment and structure
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens} Back     alignment and structure
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A Back     alignment and structure
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A* Back     alignment and structure
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A* Back     alignment and structure
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2 Back     alignment and structure
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A Back     alignment and structure
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ... Back     alignment and structure
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ... Back     alignment and structure
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A* Back     alignment and structure
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ... Back     alignment and structure
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2 Back     alignment and structure
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A* Back     alignment and structure
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens} Back     alignment and structure
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A* Back     alignment and structure
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A* Back     alignment and structure
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2 Back     alignment and structure
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ... Back     alignment and structure
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A* Back     alignment and structure
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A Back     alignment and structure
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2 Back     alignment and structure
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ... Back     alignment and structure
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B* Back     alignment and structure
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A* Back     alignment and structure
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Back     alignment and structure
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Back     alignment and structure
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A* Back     alignment and structure
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 311
d1t6ex_381 b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Tr 3e-24
d1j71a_334 b.50.1.2 (A:) Acid protease {Yeast (Candida tropic 0.003
>d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]} Length = 381 Back     information, alignment and structure

class: All beta proteins
fold: Acid proteases
superfamily: Acid proteases
family: Pepsin-like
domain: Xylanase inhibitor TAXI-I
species: Wheat (Triticum aestivum) [TaxId: 4565]

 Score = 99.0 bits (245), Expect = 3e-24
 Identities = 74/301 (24%), Positives = 112/301 (37%), Gaps = 41/301 (13%)

Query: 37  SNTGTFGDIHIDVLSIQSTNGHNPGRAVTVPNFILLCGSEFVLQGLANGVVGIAGLGRSK 96
           S     G +        +T+G  P   V V   +  C    +L  L  G  G+AGL  S 
Sbjct: 89  SGACAAGSLSHTRFVANTTDGSKPVSKVNV-GVLAACAPSKLLASLPRGSTGVAGLANSG 147

Query: 97  VALPSQLV-AFSLKRKFALYLSPFGNGVIIFSDGPYDLNFDVSNTASGFL--GEPSVEYF 153
           +ALP+Q+  A  +  +F L L   G GV IF  GP        +     L     S  ++
Sbjct: 148 LALPAQVASAQKVANRFLLCLPTGGPGVAIFGGGPVPWPQFTQSMPYTPLVTKGGSPAHY 207

Query: 154 IGVASVNVNGKAVPLNKTLLSIDNEGVDGAKINTVNPYTVLETSIYKAFVQAFANAM--- 210
           I   S+ V    VP+ +           G  ++T  PY +L   +Y+  + AF  A+   
Sbjct: 208 ISARSIVVGDTRVPVPEG-----ALATGGVMLSTRLPYVLLRPDVYRPLMDAFTKALAAQ 262

Query: 211 -----PKVTRVSPVAPSRACFRLQDIGFTRIRPFVPQIDLVLQNKNVVW----------- 254
                P    V  VAP   C+  + +G       VP + L L   +              
Sbjct: 263 HANGAPVARAVEAVAPFGVCYDTKTLGNNLGGYAVPNVQLGLDGGSDWTMTGKNSMVDVK 322

Query: 255 -----------RFVDGGVNPQTSIVIGGCQLENNLLQFDLATSRLDFSNSLLFEQTTCSN 303
                      + V  G     ++++GG Q+E+ +L FD+   RL FS    F  T C  
Sbjct: 323 QGTACVAFVEMKGVAAGDGRAPAVILGGAQMEDFVLDFDMEKKRLGFSRLPHF--TGCGG 380

Query: 304 F 304
            
Sbjct: 381 L 381
>d1j71a_ b.50.1.2 (A:) Acid protease {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 334 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query311
d1t6ex_381 Xylanase inhibitor TAXI-I {Wheat (Triticum aestivu 100.0
d1j71a_334 Acid protease {Yeast (Candida tropicalis) [TaxId: 100.0
d1dpja_329 Acid protease {Baker's yeast (Saccharomyces cerevi 100.0
g1htr.1372 Pepsin(ogen) {Human (Homo sapiens), progastricsin 100.0
d3psga_370 Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} 100.0
d1eaga_342 Acid protease {Yeast (Candida albicans) [TaxId: 54 99.97
d2apra_325 Acid protease {Bread mold (Rhizopus chinensis) [Ta 99.97
d2qp8a1387 beta-secretase (memapsin) {Human (Homo sapiens) [T 99.97
d1am5a_324 Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 99.97
d1smra_335 Chymosin (synonym: renin) {Mouse (Mus musculus) [T 99.97
d1oewa_330 Endothiapepsin {Chestnut blight fungus (Endothia p 99.97
d1izea_323 Acid protease {Fungus (Aspergillus oryzae) [TaxId: 99.96
d1mppa_357 Pepsin {Mucor pusillus [TaxId: 4840]} 99.96
d1hrna_337 Chymosin (synonym: renin) {Human (Homo sapiens) [T 99.96
d1wkra_340 Acid protease {Irpex lacteus (Polyporus tulipifera 99.96
d1bxoa_323 Acid protease {Fungus (Penicillium janthinellum), 99.95
d1miqa_373 Plasmepsin (a hemoglobin-degrading enzyme) {Plasmo 99.95
g1lya.1338 Cathepsin D {Human (Homo sapiens) [TaxId: 9606]} 99.95
g1b5f.1326 Plant acid proteinase, phytepsin {Cynara carduncul 99.94
d3cmsa_323 Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId 99.94
d1qdma2337 Plant acid proteinase, phytepsin {Barley (Hordeum 99.94
d2bjua1329 Plasmepsin (a hemoglobin-degrading enzyme) {Plasmo 99.94
>d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]} Back     information, alignment and structure
class: All beta proteins
fold: Acid proteases
superfamily: Acid proteases
family: Pepsin-like
domain: Xylanase inhibitor TAXI-I
species: Wheat (Triticum aestivum) [TaxId: 4565]

Probab=100.00  E-value=3.1e-33  Score=261.88  Aligned_cols=255  Identities=25%  Similarity=0.442  Sum_probs=178.3

Q ss_pred             cCCceEEEEEEEEEEEeecCCCCCCCcceeeCcEEEEeeecccccCCCCCcceEEeeCCCCCChHHHHhhcc-CCCcEEe
Q 040428           36 ISNTGTFGDIHIDVLSIQSTNGHNPGRAVTVPNFILLCGSEFVLQGLANGVVGIAGLGRSKVALPSQLVAFS-LKRKFAL  114 (311)
Q Consensus        36 ~~gs~~~G~l~~D~v~~~~~~g~~~~~~~~v~~~~FGc~~~~~~~~~~~~~~GIlGLg~~~~Sl~~ql~~~g-l~~~FS~  114 (311)
                      .+|+.++|.+++|+|++++.+...... ....++.|+|.............+||+|||+.+.+|++|+.+.+ +.++||+
T Consensus        88 ~~Gs~~~G~~~~D~v~ig~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~dGi~Glg~~~~s~~~ql~~~~~~~~~fsl  166 (381)
T d1t6ex_          88 VSGACAAGSLSHTRFVANTTDGSKPVS-KVNVGVLAACAPSKLLASLPRGSTGVAGLANSGLALPAQVASAQKVANRFLL  166 (381)
T ss_dssp             TTCCBCCEEEEEEEEEEEEESSSSEEE-EEEEEEEEEECCGGGGTTSCTTEEEEEECSSSTTSHHHHHHHHHTCCSEEEE
T ss_pred             CCCCEEEEEEEEEEEEeccccccccee-eEEeeeeeeccccccccccccCcceeeecCCCCcchHHHHhhhcCcceEEEe
Confidence            377789999999999998753221111 12345678887776444445678999999999999999998333 4789999


Q ss_pred             ccCCC--CcceEEEcCCCCCCCCcceeee--e--ecCCCCCcceEEEEEEEEEcceEeecCcccccccCCCCCcEEEecC
Q 040428          115 YLSPF--GNGVIIFSDGPYDLNFDVSNTA--S--GFLGEPSVEYFIGVASVNVNGKAVPLNKTLLSIDNEGVDGAKINTV  188 (311)
Q Consensus       115 cL~~~--~~G~l~fG~~d~~~~~~~s~~l--t--~~~~~~~~~Y~V~l~gIsvg~~~l~~~~~~~~~~~~g~~~~iiDSG  188 (311)
                      ||.+.  ..+.+.+|+.+..   ++.+++  +  +.+ ....+|.|.|++|.++++.+..+...     .....+|||||
T Consensus       167 ~l~~~~~~~~~~~~g~~~~~---~~~g~~~~~pi~~~-~~~~~~~v~l~~i~v~~~~~~~~~~~-----~~~~~~i~DTG  237 (381)
T d1t6ex_         167 CLPTGGPGVAIFGGGPVPWP---QFTQSMPYTPLVTK-GGSPAHYISARSIVVGDTRVPVPEGA-----LATGGVMLSTR  237 (381)
T ss_dssp             ECCSSSCEEEEESCCSCSCH---HHHTTCCEEECBCC-TTCCSCEECEEEEEETTEECCCCTTC-----SCTTCEEECSS
T ss_pred             ecCCCcccceEeeccccccc---ccCCceEEEeeecc-CCCceeEEEEEEEeeCCeeeccCccc-----ccCcceEEecC
Confidence            99876  3445555566653   333333  1  222 34578999999999999998765432     22467999999


Q ss_pred             CcccccCHHHHHHHHHHHHhhCC-----Cc---cccCCCCCCcceeeecCCCccccCCCCCeEEEEEcCCceEEE-----
Q 040428          189 NPYTVLETSIYKAFVQAFANAMP-----KV---TRVSPVAPSRACFRLQDIGFTRIRPFVPQIDLVLQNKNVVWR-----  255 (311)
Q Consensus       189 Tt~t~lp~~~y~~l~~~~~~~~~-----~~---~~~~~~~~~~~C~~~~~~~~~~~~~~~P~i~~~f~g~~~~l~-----  255 (311)
                      |++++||+++|++|.+++.+.+.     ..   ........+.+||+.+..........+|.|+|+|+++ ..+.     
T Consensus       238 tt~~~lp~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~i~~~f~~~-~~~~i~~~~  316 (381)
T d1t6ex_         238 LPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAVEAVAPFGVCYDTKTLGNNLGGYAVPNVQLGLDGG-SDWTMTGKN  316 (381)
T ss_dssp             CSSEEECHHHHHHHHHHHHHHHHHC-------CCEECCCTTCSCEEEGGGCCEETTEECCCCEEEEETTS-CEEEECHHH
T ss_pred             CceEECCHHHHHHHHHHHHHHhcccccccccccccccccCCcceeeccccccccccccccccEEEEEcCC-cEEEEChhH
Confidence            99999999999999999987643     01   1112234567999876543222235789999999865 3333     


Q ss_pred             -eec--CC-----C----------CCCcceeeccceeeceEEEEECCCCEEEEEecCCCCCCCCCC
Q 040428          256 -FVD--GG-----V----------NPQTSIVIGGCQLENNLLQFDLATSRLDFSNSLLFEQTTCSN  303 (311)
Q Consensus       256 -~~~--~G-----~----------~~~~~~ILG~~~~r~~~vvfDl~~~riGFa~~~~~~~~~C~~  303 (311)
                       ++.  .+     +          ...+.+|||+.|||++|+|||++++|||||+...  .++|+.
T Consensus       317 y~~~~~~~~~Cl~i~~~~~~~~~~~~~~~~ILG~~flr~~y~vfD~~~~~IGfA~~~~--~~~~~~  380 (381)
T d1t6ex_         317 SMVDVKQGTACVAFVEMKGVAAGDGRAPAVILGGAQMEDFVLDFDMEKKRLGFSRLPH--FTGCGG  380 (381)
T ss_dssp             HEEEEETTEEEESEEECCCCC------CSEEECHHHHTTEEEEEETTTTEEEEEECCT--TCCSCC
T ss_pred             eEEEeCCCcEEEEEEecccccCCCCCCCcEEECHHHhCcEEEEEECCCCEEEEEECCC--CCCCcC
Confidence             111  11     0          1235699999999999999999999999997443  477765
>d1j71a_ b.50.1.2 (A:) Acid protease {Yeast (Candida tropicalis) [TaxId: 5482]} Back     information, alignment and structure
>d1dpja_ b.50.1.2 (A:) Acid protease {Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]} Back     information, alignment and structure
>d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1eaga_ b.50.1.2 (A:) Acid protease {Yeast (Candida albicans) [TaxId: 5476]} Back     information, alignment and structure
>d2apra_ b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus chinensis) [TaxId: 4843]} Back     information, alignment and structure
>d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1am5a_ b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 8049]} Back     information, alignment and structure
>d1smra_ b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1oewa_ b.50.1.2 (A:) Endothiapepsin {Chestnut blight fungus (Endothia parasitica) [TaxId: 5116]} Back     information, alignment and structure
>d1izea_ b.50.1.2 (A:) Acid protease {Fungus (Aspergillus oryzae) [TaxId: 5062]} Back     information, alignment and structure
>d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]} Back     information, alignment and structure
>d1hrna_ b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1wkra_ b.50.1.2 (A:) Acid protease {Irpex lacteus (Polyporus tulipiferae), Polyporopepsin [TaxId: 5319]} Back     information, alignment and structure
>d1bxoa_ b.50.1.2 (A:) Acid protease {Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]} Back     information, alignment and structure
>d1miqa_ b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium vivax [TaxId: 5855]} Back     information, alignment and structure
>d3cmsa_ b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1qdma2 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase, phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]} Back     information, alignment and structure
>d2bjua1 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium falciparum, plasmepsin II [TaxId: 5833]} Back     information, alignment and structure