Citrus Sinensis ID: 040461
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 318 | ||||||
| 358347646 | 237 | Soluble inorganic pyrophosphatase [Medic | 0.657 | 0.881 | 0.863 | 1e-101 | |
| 5669924 | 215 | soluble inorganic pyrophosphatase [Popul | 0.632 | 0.934 | 0.875 | 1e-101 | |
| 224064388 | 215 | predicted protein [Populus trichocarpa] | 0.632 | 0.934 | 0.875 | 1e-101 | |
| 224097333 | 215 | predicted protein [Populus trichocarpa] | 0.632 | 0.934 | 0.870 | 1e-100 | |
| 255548079 | 232 | inorganic pyrophosphatase, putative [Ric | 0.632 | 0.866 | 0.877 | 1e-100 | |
| 225453656 | 222 | PREDICTED: soluble inorganic pyrophospha | 0.610 | 0.873 | 0.886 | 1e-100 | |
| 224128081 | 216 | predicted protein [Populus trichocarpa] | 0.606 | 0.893 | 0.896 | 1e-100 | |
| 15223288 | 212 | inorganic pyrophosphatase [Arabidopsis t | 0.616 | 0.924 | 0.879 | 1e-100 | |
| 388511195 | 212 | unknown [Medicago truncatula] | 0.616 | 0.924 | 0.894 | 1e-100 | |
| 84619270 | 215 | soluble inorganic pyrophosphatase [Papav | 0.616 | 0.911 | 0.876 | 1e-99 |
| >gi|358347646|ref|XP_003637867.1| Soluble inorganic pyrophosphatase [Medicago truncatula] gi|355503802|gb|AES85005.1| Soluble inorganic pyrophosphatase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/213 (86%), Positives = 196/213 (92%), Gaps = 4/213 (1%)
Query: 29 PFT-FISDSSSIFKMSEEAA---NVSRSAPKLNERILSSLSRRSVAAHPWHDLEIGPGAP 84
PFT F++ +FKMSEE + +R P+LNERILSSLSRRSVAAHPWHDLEIGPGAP
Sbjct: 12 PFTPFLNILLVLFKMSEEKSEEVQETRPTPRLNERILSSLSRRSVAAHPWHDLEIGPGAP 71
Query: 85 NVFNCVVEITKGSKVKYELDKKTGLIKVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLV 144
N+FNCVVEITKGSKVKYELDKKTG+IKVDR+LYSSVVYPHNYGFIPRTLCEDNDPLDVLV
Sbjct: 72 NIFNCVVEITKGSKVKYELDKKTGMIKVDRILYSSVVYPHNYGFIPRTLCEDNDPLDVLV 131
Query: 145 LMQEPVLPGCFLRARAIGLMPMIDQGEKDDKIIAVCADDPEYKHYTDIKELPPHRLTEIR 204
LMQEPVLPGCFLRARAIGLMPMIDQGEKDDKIIAVCADDPEYKHYTD KEL PHRL EI+
Sbjct: 132 LMQEPVLPGCFLRARAIGLMPMIDQGEKDDKIIAVCADDPEYKHYTDFKELQPHRLMEIK 191
Query: 205 RFFEDYKKNENKKVAVNEFLPTSTAVEAIQYSM 237
RFFEDYKKNENK+VAVNEFLP STAVEAIQ+SM
Sbjct: 192 RFFEDYKKNENKEVAVNEFLPPSTAVEAIQHSM 224
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|5669924|gb|AAD46520.1|AF149116_1 soluble inorganic pyrophosphatase [Populus tremula x Populus tremuloides] gi|45925891|gb|AAS79105.1| soluble inorganic pyrophosphatase [Populus tomentosa] | Back alignment and taxonomy information |
|---|
| >gi|224064388|ref|XP_002301451.1| predicted protein [Populus trichocarpa] gi|222843177|gb|EEE80724.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|224097333|ref|XP_002334621.1| predicted protein [Populus trichocarpa] gi|222873826|gb|EEF10957.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|255548079|ref|XP_002515096.1| inorganic pyrophosphatase, putative [Ricinus communis] gi|223545576|gb|EEF47080.1| inorganic pyrophosphatase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|225453656|ref|XP_002268289.1| PREDICTED: soluble inorganic pyrophosphatase [Vitis vinifera] gi|147856744|emb|CAN81349.1| hypothetical protein VITISV_012719 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|224128081|ref|XP_002320239.1| predicted protein [Populus trichocarpa] gi|118485479|gb|ABK94595.1| unknown [Populus trichocarpa] gi|222861012|gb|EEE98554.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|15223288|ref|NP_171613.1| inorganic pyrophosphatase [Arabidopsis thaliana] gi|297843016|ref|XP_002889389.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|15450699|gb|AAK96621.1| At1g01050/T25K16_5 [Arabidopsis thaliana] gi|16323129|gb|AAL15299.1| At1g01050/T25K16_5 [Arabidopsis thaliana] gi|17473935|gb|AAL38377.1| putative inorganic pyrophosphatase [Arabidopsis thaliana] gi|20148453|gb|AAM10117.1| putative inorganic pyrophosphatase [Arabidopsis thaliana] gi|21537232|gb|AAM61573.1| soluble inorganic pyrophosphatase, putative [Arabidopsis thaliana] gi|24797046|gb|AAN64535.1| At1g01050/T25K16_5 [Arabidopsis thaliana] gi|110741975|dbj|BAE98927.1| putative soluble inorganic pyrophosphatase [Arabidopsis thaliana] gi|225897848|dbj|BAH30256.1| hypothetical protein [Arabidopsis thaliana] gi|297335231|gb|EFH65648.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|332189101|gb|AEE27222.1| inorganic pyrophosphatase [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|388511195|gb|AFK43659.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|84619270|emb|CAJ44303.1| soluble inorganic pyrophosphatase [Papaver rhoeas] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 318 | ||||||
| TAIR|locus:2200965 | 212 | PPa1 "pyrophosphorylase 1" [Ar | 0.616 | 0.924 | 0.829 | 4.7e-87 | |
| TAIR|locus:2041424 | 216 | PPa3 "pyrophosphorylase 3" [Ar | 0.635 | 0.935 | 0.801 | 1.7e-84 | |
| TAIR|locus:2116997 | 216 | PPa5 "pyrophosphorylase 5" [Ar | 0.619 | 0.912 | 0.776 | 9.4e-82 | |
| TAIR|locus:2084066 | 216 | PPa4 "pyrophosphorylase 4" [Ar | 0.584 | 0.861 | 0.790 | 2e-79 | |
| TAIR|locus:2062195 | 218 | PPa2 "pyrophosphorylase 2" [Ar | 0.572 | 0.834 | 0.763 | 5.1e-74 | |
| UNIPROTKB|Q949J1 | 192 | ppa2 "Soluble inorganic pyroph | 0.537 | 0.890 | 0.654 | 3.5e-59 | |
| TIGR_CMR|DET_0367 | 211 | DET_0367 "inorganic pyrophosph | 0.528 | 0.796 | 0.402 | 7.1e-29 | |
| UNIPROTKB|P65746 | 162 | ppa "Inorganic pyrophosphatase | 0.389 | 0.765 | 0.451 | 1.3e-27 | |
| TIGR_CMR|CJE_0741 | 172 | CJE_0741 "inorganic pyrophosph | 0.418 | 0.773 | 0.433 | 1.8e-25 | |
| TIGR_CMR|CBU_0628 | 175 | CBU_0628 "inorganic pyrophosph | 0.408 | 0.742 | 0.440 | 5.3e-24 |
| TAIR|locus:2200965 PPa1 "pyrophosphorylase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 870 (311.3 bits), Expect = 4.7e-87, P = 4.7e-87
Identities = 165/199 (82%), Positives = 176/199 (88%)
Query: 42 MSEEAAN---VSRSAPKLNERILSSLSRRSVAAHPWHDLEIGPGAPNVFNCVVEITKGSK 98
MSEE + + R AP+LNERILSSLSRRSVAAHPWHDLEIGPGAP +FN VVEITKGSK
Sbjct: 1 MSEETKDNQRLQRPAPRLNERILSSLSRRSVAAHPWHDLEIGPGAPQIFNVVVEITKGSK 60
Query: 99 VKYELDKKTGLIKVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLVLMQEPVLPGCFLRA 158
VKYELDKKTGLIKVDR+LYSSVVYPHNYGF+PRTLCEDNDP+DVLV+MQEPVLPGCFLRA
Sbjct: 61 VKYELDKKTGLIKVDRILYSSVVYPHNYGFVPRTLCEDNDPIDVLVIMQEPVLPGCFLRA 120
Query: 159 RAIGLMPMIDQGEKDDKIIAVCADDPEYKHYTDIKELPPHRLTEIRRFFEDYXXXXXXXX 218
RAIGLMPMIDQGEKDDKIIAVC DDPEYKHYTDIKELPPHRL+EIRRFFEDY
Sbjct: 121 RAIGLMPMIDQGEKDDKIIAVCVDDPEYKHYTDIKELPPHRLSEIRRFFEDYKKNENKEV 180
Query: 219 XXXXFLPTSTAVEAIQYSM 237
FLP+ +AVEAIQYSM
Sbjct: 181 AVNDFLPSESAVEAIQYSM 199
|
|
| TAIR|locus:2041424 PPa3 "pyrophosphorylase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2116997 PPa5 "pyrophosphorylase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2084066 PPa4 "pyrophosphorylase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2062195 PPa2 "pyrophosphorylase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q949J1 ppa2 "Soluble inorganic pyrophosphatase 2" [Chlamydomonas reinhardtii (taxid:3055)] | Back alignment and assigned GO terms |
|---|
| TIGR_CMR|DET_0367 DET_0367 "inorganic pyrophosphatase" [Dehalococcoides ethenogenes 195 (taxid:243164)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|P65746 ppa "Inorganic pyrophosphatase" [Mycobacterium tuberculosis (taxid:1773)] | Back alignment and assigned GO terms |
|---|
| TIGR_CMR|CJE_0741 CJE_0741 "inorganic pyrophosphatase" [Campylobacter jejuni RM1221 (taxid:195099)] | Back alignment and assigned GO terms |
|---|
| TIGR_CMR|CBU_0628 CBU_0628 "inorganic pyrophosphatase" [Coxiella burnetii RSA 493 (taxid:227377)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| fgenesh4_pm.C_LG_II000842 | inorganic pyrophosphatase (EC-3.6.1.1) (215 aa) | ||||||||||
(Populus trichocarpa) | |||||||||||
| estExt_Genewise1_v1.C_LG_VIII0332 | • | • | 0.910 | ||||||||
| estExt_Genewise1_v1.C_LG_X3071 | • | • | 0.910 | ||||||||
| estExt_fgenesh4_pg.C_LG_IX0294 | • | • | 0.903 | ||||||||
| estExt_fgenesh4_pm.C_LG_IV0548 | • | • | 0.903 | ||||||||
| gw1.6399.6.1 | • | • | 0.901 | ||||||||
| PtrAtpB_1 | • | • | 0.900 | ||||||||
| estExt_Genewise1_v1.C_LG_VIII1306 | • | • | 0.900 | ||||||||
| gw1.XVIII.1630.1 | • | 0.899 | |||||||||
| gw1.XV.1202.1 | • | 0.899 | |||||||||
| gw1.XII.988.1 | • | 0.899 |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 318 | |||
| PLN02373 | 188 | PLN02373, PLN02373, soluble inorganic pyrophosphat | 1e-145 | |
| cd00412 | 155 | cd00412, pyrophosphatase, Inorganic pyrophosphatas | 1e-86 | |
| pfam00719 | 156 | pfam00719, Pyrophosphatase, Inorganic pyrophosphat | 6e-81 | |
| COG0221 | 171 | COG0221, Ppa, Inorganic pyrophosphatase [Energy pr | 1e-66 | |
| PRK02230 | 184 | PRK02230, PRK02230, inorganic pyrophosphatase; Pro | 2e-53 | |
| PRK01250 | 176 | PRK01250, PRK01250, inorganic pyrophosphatase; Pro | 6e-51 | |
| PRK00642 | 205 | PRK00642, PRK00642, inorganic pyrophosphatase; Pro | 3e-47 | |
| PLN02707 | 267 | PLN02707, PLN02707, Soluble inorganic pyrophosphat | 3e-22 |
| >gnl|CDD|178001 PLN02373, PLN02373, soluble inorganic pyrophosphatase | Back alignment and domain information |
|---|
Score = 406 bits (1046), Expect = e-145
Identities = 164/175 (93%), Positives = 170/175 (97%)
Query: 63 SLSRRSVAAHPWHDLEIGPGAPNVFNCVVEITKGSKVKYELDKKTGLIKVDRVLYSSVVY 122
S+SRRSVAAHPWHDLEIGPGAP +FNCVVEITKGSKVKYELDKKTGLIKVDRVLYSSVVY
Sbjct: 1 SMSRRSVAAHPWHDLEIGPGAPAIFNCVVEITKGSKVKYELDKKTGLIKVDRVLYSSVVY 60
Query: 123 PHNYGFIPRTLCEDNDPLDVLVLMQEPVLPGCFLRARAIGLMPMIDQGEKDDKIIAVCAD 182
PHNYGFIPRTLCEDNDPLDVLVLMQEPVLPGCFLRARAIGLMPMIDQGEKDDKIIAVCAD
Sbjct: 61 PHNYGFIPRTLCEDNDPLDVLVLMQEPVLPGCFLRARAIGLMPMIDQGEKDDKIIAVCAD 120
Query: 183 DPEYKHYTDIKELPPHRLTEIRRFFEDYKKNENKKVAVNEFLPTSTAVEAIQYSM 237
DPEY+HYTDIKELPPHRL EIRRFFEDYKKNENK+VAVN+FLP A+EAIQYSM
Sbjct: 121 DPEYRHYTDIKELPPHRLAEIRRFFEDYKKNENKEVAVNDFLPAEAAIEAIQYSM 175
|
Length = 188 |
| >gnl|CDD|238239 cd00412, pyrophosphatase, Inorganic pyrophosphatase | Back alignment and domain information |
|---|
| >gnl|CDD|189686 pfam00719, Pyrophosphatase, Inorganic pyrophosphatase | Back alignment and domain information |
|---|
| >gnl|CDD|223299 COG0221, Ppa, Inorganic pyrophosphatase [Energy production and conversion] | Back alignment and domain information |
|---|
| >gnl|CDD|179388 PRK02230, PRK02230, inorganic pyrophosphatase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|179262 PRK01250, PRK01250, inorganic pyrophosphatase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|179080 PRK00642, PRK00642, inorganic pyrophosphatase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|178309 PLN02707, PLN02707, Soluble inorganic pyrophosphatase | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 318 | |||
| PLN02373 | 188 | soluble inorganic pyrophosphatase | 100.0 | |
| PRK00642 | 205 | inorganic pyrophosphatase; Provisional | 100.0 | |
| PRK01250 | 176 | inorganic pyrophosphatase; Provisional | 100.0 | |
| PLN02707 | 267 | Soluble inorganic pyrophosphatase | 100.0 | |
| PRK02230 | 184 | inorganic pyrophosphatase; Provisional | 100.0 | |
| cd00412 | 155 | pyrophosphatase Inorganic pyrophosphatase. These e | 100.0 | |
| PF00719 | 156 | Pyrophosphatase: Inorganic pyrophosphatase; InterP | 100.0 | |
| COG0221 | 171 | Ppa Inorganic pyrophosphatase [Energy production a | 100.0 | |
| KOG1626 | 279 | consensus Inorganic pyrophosphatase/Nucleosome rem | 100.0 | |
| KOG1626 | 279 | consensus Inorganic pyrophosphatase/Nucleosome rem | 95.04 |
| >PLN02373 soluble inorganic pyrophosphatase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-70 Score=492.02 Aligned_cols=183 Identities=90% Similarity=1.437 Sum_probs=178.7
Q ss_pred ecccCCcccCCCCCCCCCCCCCCeEEEEEEecCCCCceEEEeccCCCeEeeeecccccccccccCccccccCCCCCcceE
Q 040461 63 SLSRRSVAAHPWHDLEIGPGAPNVFNCVVEITKGSKVKYELDKKTGLIKVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDV 142 (318)
Q Consensus 63 s~~~~~~~~spwHDIPl~~~~p~~vnvVVEIPkgS~aKyEidk~~g~ik~DRvl~~~~~YP~NYGfIPqTl~gDGDPLDV 142 (318)
||+++...+|||||||++++.|+.+||||||||||++|||+|+++|.|++||++++++.||+|||||||||+||||||||
T Consensus 1 ~~~~~~~~~~~whdi~~~~~~~~~v~vVIEIP~gs~~KyE~dk~~g~i~~Dr~l~~~~~yP~nYGfIP~T~~~DgDPLDv 80 (188)
T PLN02373 1 SMSRRSVAAHPWHDLEIGPGAPAIFNCVVEITKGSKVKYELDKKTGLIKVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDV 80 (188)
T ss_pred CcccccccCCccccCCCCCCCCCEEEEEEEECCCCCeeEEEccCCCCEEEeeecccCCcCCcccccccccccCCCCccEE
Confidence 47888889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCccCCCeeEEEEEEeeeEEeeeCCCCccEEEEEeCCCcccCCCCCCCCCChhhHHHHHHHHHHcccCCCceeEeCe
Q 040461 143 LVLMQEPVLPGCFLRARAIGLMPMIDQGEKDDKIIAVCADDPEYKHYTDIKELPPHRLTEIRRFFEDYKKNENKKVAVNE 222 (318)
Q Consensus 143 lVLg~~p~~pG~Vv~vRvIGvL~MiDeGE~D~KIIaV~~~DP~~~~i~dI~DLp~~~l~eI~~FF~~YK~leGK~v~v~g 222 (318)
|||++.|+.||++++|||||+|+|+|+||+|||||||+++||+|++++|++|||++++++|+|||++||.+|||++++++
T Consensus 81 lvl~~~~~~~G~vi~~R~iG~l~m~D~ge~D~KiIaV~~~dp~~~~i~dl~Dl~~~~l~~I~~fF~~YK~legK~v~v~g 160 (188)
T PLN02373 81 LVLMQEPVLPGCFLRARAIGLMPMIDQGEKDDKIIAVCADDPEYRHYTDIKELPPHRLAEIRRFFEDYKKNENKEVAVND 160 (188)
T ss_pred EEecCCCCCCceEEEEEEEEEEEEeeCCCCCCeEEEEECCCcccccCCChHHCCHHHHHHHHHHHHHhcccCCCeEEeCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCHHHHHHHHHHHHHHHhcccc
Q 040461 223 FLPTSTAVEAIQYSMCVRPKLSF 245 (318)
Q Consensus 223 ~~d~e~A~kvI~ea~~~y~~~~~ 245 (318)
|.|+++|+++|++|+++|+++..
T Consensus 161 ~~~~~~A~~~I~~~~~~y~~~~~ 183 (188)
T PLN02373 161 FLPAEAAIEAIQYSMDLYAEYIV 183 (188)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999988753
|
|
| >PRK00642 inorganic pyrophosphatase; Provisional | Back alignment and domain information |
|---|
| >PRK01250 inorganic pyrophosphatase; Provisional | Back alignment and domain information |
|---|
| >PLN02707 Soluble inorganic pyrophosphatase | Back alignment and domain information |
|---|
| >PRK02230 inorganic pyrophosphatase; Provisional | Back alignment and domain information |
|---|
| >cd00412 pyrophosphatase Inorganic pyrophosphatase | Back alignment and domain information |
|---|
| >PF00719 Pyrophosphatase: Inorganic pyrophosphatase; InterPro: IPR008162 Inorganic pyrophosphatase (3 | Back alignment and domain information |
|---|
| >COG0221 Ppa Inorganic pyrophosphatase [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG1626 consensus Inorganic pyrophosphatase/Nucleosome remodeling factor, subunit NURF38 [Energy production and conversion] | Back alignment and domain information |
|---|
| >KOG1626 consensus Inorganic pyrophosphatase/Nucleosome remodeling factor, subunit NURF38 [Energy production and conversion] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 318 | ||||
| 1twl_A | 186 | Inorganic Pyrophosphatase From Pyrococcus Furiosus | 8e-39 | ||
| 1ude_A | 195 | Crystal Structure Of The Inorganic Pyrophosphatase | 2e-37 | ||
| 3i98_A | 178 | X-Ray Crystallographic Structure Of Inorganic Pyrop | 7e-36 | ||
| 3q46_A | 178 | Magnesium Activated Inorganic Pyrophosphatase From | 3e-35 | ||
| 3r6e_A | 178 | The Structure Of Thermococcus Thioreducens' Inorgan | 4e-33 | ||
| 1qez_A | 173 | Sulfolobus Acidocaldarius Inorganic Pyrophosphatase | 2e-30 | ||
| 2uxs_A | 169 | 2.7a Crystal Structure Of Inorganic Pyrophosphatase | 1e-28 | ||
| 1sxv_A | 172 | 1.3a Crystal Structure Of Rv3628, Mycobacterium Tub | 1e-28 | ||
| 1wcf_A | 171 | 1.54 A Crystal Structure Of Rv3628, Mycobacterium T | 1e-28 | ||
| 4ecp_A | 167 | X-Ray Crystal Structure Of Inorganic Pyrophosphate | 3e-28 | ||
| 3sw5_A | 180 | Crystal Structure Of Inorganic Pyrophosphatase From | 8e-28 | ||
| 2bqx_A | 173 | Inorganic Pyrophosphatase From The Pathogenic Bacte | 2e-26 | ||
| 2prd_A | 174 | Crystal Structure Of Inorganic Pyrophosphatase From | 2e-26 | ||
| 3fq3_A | 197 | Crystal Structure Of Inorganic Phosphatase From Bru | 3e-26 | ||
| 1ygz_A | 173 | Crystal Structure Of Inorganic Pyrophosphatase From | 6e-26 | ||
| 3d63_A | 196 | Crystal Structure Of Inorganic Pyrophosphatase From | 6e-24 | ||
| 3ld3_A | 199 | Crystal Structure Of Inorganic Phosphatase From Ana | 3e-23 | ||
| 3d53_A | 173 | 2.2 A Crystal Structure Of Inorganic Pyrophosphatas | 1e-21 | ||
| 3tr4_A | 178 | Structure Of An Inorganic Pyrophosphatase (Ppa) Fro | 2e-21 | ||
| 3lo0_A | 193 | Crystal Structure Of Inorganic Pyrophosphatase From | 5e-21 | ||
| 2eip_A | 175 | Inorganic Pyrophosphatase Length = 175 | 3e-20 | ||
| 1obw_A | 175 | Structure Of Inorganic Pyrophosphatase Length = 175 | 6e-20 | ||
| 1mjz_A | 175 | Structure Of Inorganic Pyrophosphatase Mutant D97n | 9e-20 | ||
| 1mjw_A | 175 | Structure Of Inorganic Pyrophosphatase Mutant D42n | 9e-20 | ||
| 1mjx_A | 175 | Structure Of Inorganic Pyrophosphatase Mutant D65n | 9e-20 | ||
| 1mjy_A | 175 | Structure Of Inorganic Pyrophosphatase Mutant D70n | 2e-19 | ||
| 2au7_A | 175 | The R43q Active Site Variant Of E.Coli Inorganic Py | 2e-19 | ||
| 3i4q_A | 176 | Structure Of A Putative Inorganic Pyrophosphatase F | 1e-17 | ||
| 8prk_A | 287 | The R78k And D117e Active Site Variants Of Saccharo | 3e-12 | ||
| 1wgi_A | 286 | Structure Of Inorganic Pyrophosphatase Length = 286 | 6e-12 | ||
| 1huj_A | 281 | Refined Structure Of Yeast Inorganic Pyrophosphatas | 6e-12 | ||
| 1m38_A | 287 | Structure Of Inorganic Pyrophosphatase Length = 287 | 6e-12 | ||
| 1huk_A | 281 | Refined Structure Of Yeast Inorganic Pyrophosphatas | 6e-12 | ||
| 2ik0_A | 286 | Yeast Inorganic Pyrophosphatase Variant E48d With M | 2e-11 | ||
| 2ik1_A | 286 | Yeast Inorganic Pyrophosphatase Variant Y93f With M | 2e-11 | ||
| 2ik7_A | 286 | Yeast Inorganic Pyrophosphatase Variant D120n With | 2e-11 | ||
| 117e_A | 286 | The R78k And D117e Active Site Variants Of Saccharo | 2e-11 | ||
| 2ik6_A | 286 | Yeast Inorganic Pyrophosphatase Variant D120e With | 2e-11 | ||
| 2ik9_A | 286 | Yeast Inorganic Pyrophosphatase Variant D152e With | 2e-11 | ||
| 2ik2_A | 286 | Yeast Inorganic Pyrophosphatase Variant D115e With | 2e-11 | ||
| 1ypp_A | 286 | Acid Anhydride Hydrolase Length = 286 | 3e-11 | ||
| 1pyp_A | 285 | X-Ray Diffraction Study Of Inorganic Pyrophosphatas | 9e-11 |
| >pdb|1TWL|A Chain A, Inorganic Pyrophosphatase From Pyrococcus Furiosus Pfu-264096-001 Length = 186 | Back alignment and structure |
|
| >pdb|1UDE|A Chain A, Crystal Structure Of The Inorganic Pyrophosphatase From The Hyperthermophilic Archaeon Pyrococcus Horikoshii Ot3 Length = 195 | Back alignment and structure |
| >pdb|3I98|A Chain A, X-Ray Crystallographic Structure Of Inorganic Pyrophosphatase At 298k From Archaeon Thermococcus Thioreducens Length = 178 | Back alignment and structure |
| >pdb|3Q46|A Chain A, Magnesium Activated Inorganic Pyrophosphatase From Thermococcus Thioreducens Bound To Hydrolyzed Product At 0.99 Angstrom Resolution Length = 178 | Back alignment and structure |
| >pdb|3R6E|A Chain A, The Structure Of Thermococcus Thioreducens' Inorganic Pyrophosphatase Bound To Sulfate Length = 178 | Back alignment and structure |
| >pdb|1QEZ|A Chain A, Sulfolobus Acidocaldarius Inorganic Pyrophosphatase: An Archael Pyrophosphatase. Length = 173 | Back alignment and structure |
| >pdb|2UXS|A Chain A, 2.7a Crystal Structure Of Inorganic Pyrophosphatase (rv3628) From Mycobacterium Tuberculosis At Ph 7.5 Length = 169 | Back alignment and structure |
| >pdb|1SXV|A Chain A, 1.3a Crystal Structure Of Rv3628, Mycobacterium Tuberculosis Inorganic Pyrophosphatase (Ppase) At Ph5.0 Length = 172 | Back alignment and structure |
| >pdb|1WCF|A Chain A, 1.54 A Crystal Structure Of Rv3628, Mycobacterium Tuberculosis Inorganic Pyrophosphatase (Ppase) At Ph7.0 Length = 171 | Back alignment and structure |
| >pdb|4ECP|A Chain A, X-Ray Crystal Structure Of Inorganic Pyrophosphate Ppa From Mycobacterium Leprae Length = 167 | Back alignment and structure |
| >pdb|3SW5|A Chain A, Crystal Structure Of Inorganic Pyrophosphatase From Bartonella Henselae Length = 180 | Back alignment and structure |
| >pdb|2BQX|A Chain A, Inorganic Pyrophosphatase From The Pathogenic Bacterium Helicobacter Pylori-Kinetic And Structural Properties Length = 173 | Back alignment and structure |
| >pdb|2PRD|A Chain A, Crystal Structure Of Inorganic Pyrophosphatase From Thermus Thermophilus Length = 174 | Back alignment and structure |
| >pdb|3FQ3|A Chain A, Crystal Structure Of Inorganic Phosphatase From Brucella Melitensis Length = 197 | Back alignment and structure |
| >pdb|1YGZ|A Chain A, Crystal Structure Of Inorganic Pyrophosphatase From Helicobacter Pylori Length = 173 | Back alignment and structure |
| >pdb|3D63|A Chain A, Crystal Structure Of Inorganic Pyrophosphatase From Burkholderia Pseudomallei Length = 196 | Back alignment and structure |
| >pdb|3LD3|A Chain A, Crystal Structure Of Inorganic Phosphatase From Anaplasma Phagocytophilum At 1.75a Resolution Length = 199 | Back alignment and structure |
| >pdb|3D53|A Chain A, 2.2 A Crystal Structure Of Inorganic Pyrophosphatase From Rickettsia Prowazekii Length = 173 | Back alignment and structure |
| >pdb|3TR4|A Chain A, Structure Of An Inorganic Pyrophosphatase (Ppa) From Coxiella Burnetii Length = 178 | Back alignment and structure |
| >pdb|3LO0|A Chain A, Crystal Structure Of Inorganic Pyrophosphatase From Ehrlichia Chaffeensis Length = 193 | Back alignment and structure |
| >pdb|2EIP|A Chain A, Inorganic Pyrophosphatase Length = 175 | Back alignment and structure |
| >pdb|1OBW|A Chain A, Structure Of Inorganic Pyrophosphatase Length = 175 | Back alignment and structure |
| >pdb|1MJZ|A Chain A, Structure Of Inorganic Pyrophosphatase Mutant D97n Length = 175 | Back alignment and structure |
| >pdb|1MJW|A Chain A, Structure Of Inorganic Pyrophosphatase Mutant D42n Length = 175 | Back alignment and structure |
| >pdb|1MJX|A Chain A, Structure Of Inorganic Pyrophosphatase Mutant D65n Length = 175 | Back alignment and structure |
| >pdb|1MJY|A Chain A, Structure Of Inorganic Pyrophosphatase Mutant D70n Length = 175 | Back alignment and structure |
| >pdb|2AU7|A Chain A, The R43q Active Site Variant Of E.Coli Inorganic Pyrophosphatase Length = 175 | Back alignment and structure |
| >pdb|3I4Q|A Chain A, Structure Of A Putative Inorganic Pyrophosphatase From The Oil- Degrading Bacterium Oleispira Antarctica Length = 176 | Back alignment and structure |
| >pdb|8PRK|A Chain A, The R78k And D117e Active Site Variants Of Saccharomyces Cerevisiae Soluble Inorganic Pyrophosphatase: Structural Studies And Mechanistic Implications Length = 287 | Back alignment and structure |
| >pdb|1WGI|A Chain A, Structure Of Inorganic Pyrophosphatase Length = 286 | Back alignment and structure |
| >pdb|1HUJ|A Chain A, Refined Structure Of Yeast Inorganic Pyrophosphatase And Its K61r Mutant Length = 281 | Back alignment and structure |
| >pdb|1M38|A Chain A, Structure Of Inorganic Pyrophosphatase Length = 287 | Back alignment and structure |
| >pdb|1HUK|A Chain A, Refined Structure Of Yeast Inorganic Pyrophosphatase And Its K61r Mutant Length = 281 | Back alignment and structure |
| >pdb|2IK0|A Chain A, Yeast Inorganic Pyrophosphatase Variant E48d With Magnesium And Phosphate Length = 286 | Back alignment and structure |
| >pdb|2IK1|A Chain A, Yeast Inorganic Pyrophosphatase Variant Y93f With Magnesium And Phosphate Length = 286 | Back alignment and structure |
| >pdb|2IK7|A Chain A, Yeast Inorganic Pyrophosphatase Variant D120n With Magnesium And Phosphate Length = 286 | Back alignment and structure |
| >pdb|117E|A Chain A, The R78k And D117e Active Site Variants Of Saccharomyces Cerevisiae Soluble Inorganic Pyrophosphatase: Structural Studies And Mechanistic Implications Length = 286 | Back alignment and structure |
| >pdb|2IK6|A Chain A, Yeast Inorganic Pyrophosphatase Variant D120e With Magnesium And Phosphate Length = 286 | Back alignment and structure |
| >pdb|2IK9|A Chain A, Yeast Inorganic Pyrophosphatase Variant D152e With Magnesium And Phosphate Length = 286 | Back alignment and structure |
| >pdb|2IK2|A Chain A, Yeast Inorganic Pyrophosphatase Variant D115e With Magnesium And Phosphate Length = 286 | Back alignment and structure |
| >pdb|1YPP|A Chain A, Acid Anhydride Hydrolase Length = 286 | Back alignment and structure |
| >pdb|1PYP|A Chain A, X-Ray Diffraction Study Of Inorganic Pyrophosphatase From Baker,S Yeast At The 3 Angstroms Resolution (Russian) Length = 285 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 318 | |||
| 3q46_A | 178 | TT-ippase; inorganic pyrophosphatase, hydrolase; H | 1e-100 | |
| 2prd_A | 174 | Pyrophosphate phosphohydrolase; 2.00A {Thermus the | 4e-96 | |
| 3gvf_A | 196 | Inorganic pyrophosphatase; structural genomics, hy | 5e-95 | |
| 3ld3_A | 199 | Inorganic pyrophosphatase; structural genomics, se | 7e-95 | |
| 1sxv_A | 172 | Inorganic pyrophosphatase; structural genomics, pp | 1e-94 | |
| 1qez_A | 173 | Ppase, S-ppase, protein (inorganic pyrophosphatase | 2e-94 | |
| 2bqx_A | 173 | Inorganic pyrophosphatase; hydrolase; 1.90A {Helic | 4e-92 | |
| 3fq3_A | 197 | Inorganic pyrophosphatase:bacterial/archaeal INOR | 1e-90 | |
| 2au7_A | 175 | Inorganic pyrophosphatase; hydrolase, mutant; 1.05 | 3e-90 | |
| 3tr4_A | 178 | Inorganic pyrophosphatase; central intermediary me | 3e-85 | |
| 3d53_A | 173 | Inorganic pyrophosphatase; seattle structural G ce | 3e-85 | |
| 1e9g_A | 286 | Ppase, inorganic pyrophosphatase; pyrophosphate ph | 6e-70 |
| >3q46_A TT-ippase; inorganic pyrophosphatase, hydrolase; HET: EPE; 0.99A {Thermococcus thioreducens} PDB: 3r6e_A* 3q3l_A 3i98_A 3q4w_A 3q9m_A* 3r5u_A 3r5v_A* 3q5v_A* 1ude_A 1twl_A Length = 178 | Back alignment and structure |
|---|
Score = 290 bits (744), Expect = e-100
Identities = 74/166 (44%), Positives = 106/166 (63%)
Query: 72 HPWHDLEIGPGAPNVFNCVVEITKGSKVKYELDKKTGLIKVDRVLYSSVVYPHNYGFIPR 131
+P+H+LE GP P V ++EI KGS+ KYELDK TGL+K+DRVLYS YP +YG IP+
Sbjct: 2 NPFHELEPGPEVPEVVYALIEIPKGSRNKYELDKATGLLKLDRVLYSPFFYPVDYGIIPQ 61
Query: 132 TLCEDNDPLDVLVLMQEPVLPGCFLRARAIGLMPMIDQGEKDDKIIAVCADDPEYKHYTD 191
T +D DP D++V+M+EPV P + AR IG+M M D G+KD K++AV +DP + + D
Sbjct: 62 TWYDDGDPFDIMVIMREPVYPLTIIEARPIGIMKMEDSGDKDWKVLAVPVEDPYFNDWKD 121
Query: 192 IKELPPHRLTEIRRFFEDYKKNENKKVAVNEFLPTSTAVEAIQYSM 237
I ++P L EI FF+ YK+ + K + + A I ++
Sbjct: 122 ISDVPKAFLDEIAHFFQRYKELQGKTTKIEGWGNAEEAKREILRAI 167
|
| >2prd_A Pyrophosphate phosphohydrolase; 2.00A {Thermus thermophilus} SCOP: b.40.5.1 Length = 174 | Back alignment and structure |
|---|
| >3gvf_A Inorganic pyrophosphatase; structural genomics, hydrolase, S structural genomics center for infectious disease, ssgcid; HET: PGE; 1.75A {Burkholderia pseudomallei 1710B} PDB: 3d63_A* 3eiy_A 3ej0_A* 3ej2_A* 3eiz_A* Length = 196 | Back alignment and structure |
|---|
| >3ld3_A Inorganic pyrophosphatase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 1.75A {Anaplasma phagocytophilum} PDB: 3lo0_A Length = 199 | Back alignment and structure |
|---|
| >1sxv_A Inorganic pyrophosphatase; structural genomics, ppase,, hydrolase; 1.30A {Mycobacterium tuberculosis} PDB: 1wcf_A 2uxs_A 4ecp_A Length = 172 | Back alignment and structure |
|---|
| >1qez_A Ppase, S-ppase, protein (inorganic pyrophosphatase); thermostability, magnesium, hydrolase; 2.70A {Sulfolobus acidocaldarius} SCOP: b.40.5.1 Length = 173 | Back alignment and structure |
|---|
| >2bqx_A Inorganic pyrophosphatase; hydrolase; 1.90A {Helicobacter pylori} PDB: 1ygz_A 2bqy_A Length = 173 | Back alignment and structure |
|---|
| >3fq3_A Inorganic pyrophosphatase:bacterial/archaeal INOR pyrophosphatase; ssgcid, inorganic phosphatase; 1.90A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3sw5_A Length = 197 | Back alignment and structure |
|---|
| >2au7_A Inorganic pyrophosphatase; hydrolase, mutant; 1.05A {Escherichia coli} PDB: 1i40_A 1i6t_A 1igp_A 1obw_A 2au6_A 2au8_A 2au9_A 2auu_A 1mjy_A 1faj_A 1ino_A 1ipw_A 1jfd_A 2eip_A 1mjz_A 1mjx_A 1mjw_A 3i4q_A* Length = 175 | Back alignment and structure |
|---|
| >3tr4_A Inorganic pyrophosphatase; central intermediary metabolism, hydrolase; HET: MSE; 2.00A {Coxiella burnetii} Length = 178 | Back alignment and structure |
|---|
| >3d53_A Inorganic pyrophosphatase; seattle structural G center for infectious disease, ssgcid, hydrolase, magnesium binding; 2.20A {Rickettsia prowazekii} PDB: 3emj_A* Length = 173 | Back alignment and structure |
|---|
| >1e9g_A Ppase, inorganic pyrophosphatase; pyrophosphate phosphohydrolase, hydrolase, manganese; HET: PO4; 1.15A {Saccharomyces cerevisiae} SCOP: b.40.5.1 PDB: 1e6a_A* 1wgi_A 1wgj_A 2ihp_A* 8prk_A 2ik6_A 2ik2_A 2ik4_A 117e_A 2ik1_A* 2ik9_A 2ik0_A 2ik7_A 1m38_A 1ypp_A 1huk_A 1huj_A 1pyp_A Length = 286 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 318 | |||
| 3q46_A | 178 | TT-ippase; inorganic pyrophosphatase, hydrolase; H | 100.0 | |
| 2prd_A | 174 | Pyrophosphate phosphohydrolase; 2.00A {Thermus the | 100.0 | |
| 3gvf_A | 196 | Inorganic pyrophosphatase; structural genomics, hy | 100.0 | |
| 3fq3_A | 197 | Inorganic pyrophosphatase:bacterial/archaeal INOR | 100.0 | |
| 3ld3_A | 199 | Inorganic pyrophosphatase; structural genomics, se | 100.0 | |
| 2au7_A | 175 | Inorganic pyrophosphatase; hydrolase, mutant; 1.05 | 100.0 | |
| 2bqx_A | 173 | Inorganic pyrophosphatase; hydrolase; 1.90A {Helic | 100.0 | |
| 3d53_A | 173 | Inorganic pyrophosphatase; seattle structural G ce | 100.0 | |
| 3tr4_A | 178 | Inorganic pyrophosphatase; central intermediary me | 100.0 | |
| 1e9g_A | 286 | Ppase, inorganic pyrophosphatase; pyrophosphate ph | 100.0 | |
| 1qez_A | 173 | Ppase, S-ppase, protein (inorganic pyrophosphatase | 100.0 | |
| 1sxv_A | 172 | Inorganic pyrophosphatase; structural genomics, pp | 100.0 |
| >3q46_A TT-ippase; inorganic pyrophosphatase, hydrolase; HET: EPE; 0.99A {Thermococcus thioreducens} SCOP: b.40.5.1 PDB: 3r6e_A* 3q3l_A 3i98_A 3q4w_A 3q9m_A* 3r5u_A 3r5v_A* 3q5v_A* 1ude_A 1twl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-71 Score=494.30 Aligned_cols=178 Identities=42% Similarity=0.733 Sum_probs=172.2
Q ss_pred cCCCCCCCCCCCCCCeEEEEEEecCCCCceEEEeccCCCeEeeeecccccccccccCccccccCCCCCcceEEEecCccC
Q 040461 71 AHPWHDLEIGPGAPNVFNCVVEITKGSKVKYELDKKTGLIKVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLVLMQEPV 150 (318)
Q Consensus 71 ~spwHDIPl~~~~p~~vnvVVEIPkgS~aKyEidk~~g~ik~DRvl~~~~~YP~NYGfIPqTl~gDGDPLDVlVLg~~p~ 150 (318)
+|||||||++.+.|+.|||||||||||++|||+|+++|.|++||++++++.||+|||||||||++||||||||||++.|+
T Consensus 1 ~spwhdi~~g~~~p~~~nvvIEIP~gs~~KyE~dk~~g~i~~DR~l~~~~~YP~NYGfIP~Tl~~DgDPlDvlvl~~~~~ 80 (178)
T 3q46_A 1 MNPFHELEPGPEVPEVVYALIEIPKGSRNKYELDKATGLLKLDRVLYSPFFYPVDYGIIPQTWYDDGDPFDIMVIMREPV 80 (178)
T ss_dssp CCTTTTSCSCSBTTTBCCCEEEECTTCCEEEEECTTTSCEEEEEECSSSCCCSSEEEECTTCCBTTTBCCEEEECCSSCC
T ss_pred CCccccCCCCCCCCCEEEEEEEECCCCCeeEEECCCCCCEEEeecccCCCCCCcccccCCCccCCCCCeeEEEEEcCCCC
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeeEEEEEEeeeEEeeeCCCCccEEEEEeCCCcccCCCCCCCCCChhhHHHHHHHHHHcccCCCceeEeCeecCHHHHH
Q 040461 151 LPGCFLRARAIGLMPMIDQGEKDDKIIAVCADDPEYKHYTDIKELPPHRLTEIRRFFEDYKKNENKKVAVNEFLPTSTAV 230 (318)
Q Consensus 151 ~pG~Vv~vRvIGvL~MiDeGE~D~KIIaV~~~DP~~~~i~dI~DLp~~~l~eI~~FF~~YK~leGK~v~v~g~~d~e~A~ 230 (318)
.||++++|||||+|+|+|+||+|||||||+++||+|++++|++|||++++++|+|||++||.+|||++++.+|.|+++|+
T Consensus 81 ~pG~vi~~r~iGvl~m~Dege~D~KiiaV~~~Dp~~~~i~di~Dl~~~~l~~i~~fF~~YK~legK~v~~~g~~~~~~A~ 160 (178)
T 3q46_A 81 YPLTIIEARPIGIMKMEDSGDKDWKVLAVPVEDPYFNDWKDISDVPKAFLDEIAHFFQRYKELQGKTTKIEGWGNAEEAK 160 (178)
T ss_dssp CTTCBC-CEEEEEEEEEETTEECCEEEEECTTCGGGTTCCSGGGSCHHHHHHHHHHHHHTTGGGTCCEEEEEEEEHHHHH
T ss_pred CCceEEEEEEEEEEEeecCCCccceEEEeeCCCccccccCChHHCCHHHHHHHHHHHHHhcCcCCCceEeccccCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccccccc
Q 040461 231 EAIQYSMCVRPKLSFNFE 248 (318)
Q Consensus 231 kvI~ea~~~y~~~~~~~~ 248 (318)
++|++|+++|+++-.+.|
T Consensus 161 ~~I~~~~~~~~~~~~~~~ 178 (178)
T 3q46_A 161 REILRAIEMYKEKFGKEE 178 (178)
T ss_dssp HHHHHHHHHHHHC-CCCC
T ss_pred HHHHHHHHHHHHHhccCC
Confidence 999999999998876543
|
| >2prd_A Pyrophosphate phosphohydrolase; 2.00A {Thermus thermophilus} SCOP: b.40.5.1 | Back alignment and structure |
|---|
| >3gvf_A Inorganic pyrophosphatase; structural genomics, hydrolase, S structural genomics center for infectious disease, ssgcid; HET: PGE; 1.75A {Burkholderia pseudomallei 1710B} PDB: 3d63_A* 3eiy_A 3ej0_A* 3ej2_A* 3eiz_A* | Back alignment and structure |
|---|
| >3fq3_A Inorganic pyrophosphatase:bacterial/archaeal INOR pyrophosphatase; ssgcid, inorganic phosphatase; 1.90A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3sw5_A | Back alignment and structure |
|---|
| >3ld3_A Inorganic pyrophosphatase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, hydrolase; 1.75A {Anaplasma phagocytophilum} PDB: 3lo0_A | Back alignment and structure |
|---|
| >2au7_A Inorganic pyrophosphatase; hydrolase, mutant; 1.05A {Escherichia coli} PDB: 1i40_A 1i6t_A 1igp_A 1obw_A 2au6_A 2au8_A 2au9_A 2auu_A 1mjy_A 1faj_A 1ino_A 1ipw_A 1jfd_A 2eip_A 1mjz_A 1mjx_A 1mjw_A 3i4q_A* | Back alignment and structure |
|---|
| >2bqx_A Inorganic pyrophosphatase; hydrolase; 1.90A {Helicobacter pylori} PDB: 1ygz_A 2bqy_A | Back alignment and structure |
|---|
| >3d53_A Inorganic pyrophosphatase; seattle structural G center for infectious disease, ssgcid, hydrolase, magnesium binding; 2.20A {Rickettsia prowazekii} PDB: 3emj_A* | Back alignment and structure |
|---|
| >3tr4_A Inorganic pyrophosphatase; central intermediary metabolism, hydrolase; HET: MSE; 2.00A {Coxiella burnetii} SCOP: b.40.5.0 | Back alignment and structure |
|---|
| >1e9g_A Ppase, inorganic pyrophosphatase; pyrophosphate phosphohydrolase, hydrolase, manganese; HET: PO4; 1.15A {Saccharomyces cerevisiae} SCOP: b.40.5.1 PDB: 1e6a_A* 1wgi_A 1wgj_A 2ihp_A* 8prk_A 2ik6_A 2ik2_A 2ik4_A 117e_A 2ik1_A* 2ik9_A 2ik0_A 2ik7_A 1m38_A 1ypp_A 1huk_A 1huj_A 1pyp_A | Back alignment and structure |
|---|
| >1qez_A Ppase, S-ppase, protein (inorganic pyrophosphatase); thermostability, magnesium, hydrolase; 2.70A {Sulfolobus acidocaldarius} SCOP: b.40.5.1 | Back alignment and structure |
|---|
| >1sxv_A Inorganic pyrophosphatase; structural genomics, ppase,, hydrolase; 1.30A {Mycobacterium tuberculosis} PDB: 1wcf_A 2uxs_A 4ecp_A | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 318 | ||||
| d1twla_ | 173 | b.40.5.1 (A:) Inorganic pyrophosphatase {Pyrococcu | 6e-66 | |
| d2prda_ | 174 | b.40.5.1 (A:) Inorganic pyrophosphatase {Thermus t | 3e-61 | |
| d1i40a_ | 175 | b.40.5.1 (A:) Inorganic pyrophosphatase {Escherich | 8e-58 | |
| d1e9ga_ | 284 | b.40.5.1 (A:) Inorganic pyrophosphatase {Baker's y | 1e-55 | |
| d1qeza_ | 170 | b.40.5.1 (A:) Inorganic pyrophosphatase {Archaeon | 1e-55 |
| >d1twla_ b.40.5.1 (A:) Inorganic pyrophosphatase {Pyrococcus furiosus [TaxId: 2261]} Length = 173 | Back information, alignment and structure |
|---|
class: All beta proteins fold: OB-fold superfamily: Inorganic pyrophosphatase family: Inorganic pyrophosphatase domain: Inorganic pyrophosphatase species: Pyrococcus furiosus [TaxId: 2261]
Score = 202 bits (516), Expect = 6e-66
Identities = 81/166 (48%), Positives = 111/166 (66%)
Query: 72 HPWHDLEIGPGAPNVFNCVVEITKGSKVKYELDKKTGLIKVDRVLYSSVVYPHNYGFIPR 131
+P+HDLE GP P V ++EI KGS+ KYELDKKTGL+K+DRVLYS YP +YG IPR
Sbjct: 1 NPFHDLEPGPDVPEVVYAIIEIPKGSRNKYELDKKTGLLKLDRVLYSPFFYPVDYGIIPR 60
Query: 132 TLCEDNDPLDVLVLMQEPVLPGCFLRARAIGLMPMIDQGEKDDKIIAVCADDPEYKHYTD 191
T ED+DP D++V+M+EPV P + AR IGL MID G+KD K++AV +DP +K + D
Sbjct: 61 TWYEDDDPFDIMVIMREPVYPLTIIEARPIGLFKMIDSGDKDYKVLAVPVEDPYFKDWKD 120
Query: 192 IKELPPHRLTEIRRFFEDYKKNENKKVAVNEFLPTSTAVEAIQYSM 237
I ++P L EI FF+ YK+ + K++ V + A I ++
Sbjct: 121 IDDVPKAFLDEIAHFFKRYKELQGKEIIVEGWEGAEAAKREILRAI 166
|
| >d2prda_ b.40.5.1 (A:) Inorganic pyrophosphatase {Thermus thermophilus [TaxId: 274]} Length = 174 | Back information, alignment and structure |
|---|
| >d1i40a_ b.40.5.1 (A:) Inorganic pyrophosphatase {Escherichia coli [TaxId: 562]} Length = 175 | Back information, alignment and structure |
|---|
| >d1e9ga_ b.40.5.1 (A:) Inorganic pyrophosphatase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 284 | Back information, alignment and structure |
|---|
| >d1qeza_ b.40.5.1 (A:) Inorganic pyrophosphatase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]} Length = 170 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 318 | |||
| d1twla_ | 173 | Inorganic pyrophosphatase {Pyrococcus furiosus [Ta | 100.0 | |
| d2prda_ | 174 | Inorganic pyrophosphatase {Thermus thermophilus [T | 100.0 | |
| d1e9ga_ | 284 | Inorganic pyrophosphatase {Baker's yeast (Saccharo | 100.0 | |
| d1qeza_ | 170 | Inorganic pyrophosphatase {Archaeon Sulfolobus aci | 100.0 | |
| d1i40a_ | 175 | Inorganic pyrophosphatase {Escherichia coli [TaxId | 100.0 |
| >d1twla_ b.40.5.1 (A:) Inorganic pyrophosphatase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: OB-fold superfamily: Inorganic pyrophosphatase family: Inorganic pyrophosphatase domain: Inorganic pyrophosphatase species: Pyrococcus furiosus [TaxId: 2261]
Probab=100.00 E-value=8.1e-69 Score=470.64 Aligned_cols=172 Identities=47% Similarity=0.831 Sum_probs=168.7
Q ss_pred CCCCCCCCCCCCCCeEEEEEEecCCCCceEEEeccCCCeEeeeecccccccccccCccccccCCCCCcceEEEecCccCC
Q 040461 72 HPWHDLEIGPGAPNVFNCVVEITKGSKVKYELDKKTGLIKVDRVLYSSVVYPHNYGFIPRTLCEDNDPLDVLVLMQEPVL 151 (318)
Q Consensus 72 spwHDIPl~~~~p~~vnvVVEIPkgS~aKyEidk~~g~ik~DRvl~~~~~YP~NYGfIPqTl~gDGDPLDVlVLg~~p~~ 151 (318)
|||||||++++.|++|||||||||||++|||+|+++|.+++||.+++++.||+|||||||||++||||||||||++.|+.
T Consensus 1 ~pwhdi~~~~~~p~~vn~viEIP~gs~~KyE~dk~~g~~~~dr~l~~~~~yP~nYGfiP~T~~~DgDPLDvlvl~~~~~~ 80 (173)
T d1twla_ 1 NPFHDLEPGPDVPEVVYAIIEIPKGSRNKYELDKKTGLLKLDRVLYSPFFYPVDYGIIPRTWYEDDDPFDIMVIMREPVY 80 (173)
T ss_dssp CHHHHSCSCSBTTTBEEEEEEECTTCSEEEEECTTTCCEEEEEECSSSCCCSSEEEECTTCCBCCB-CCEEEECCSSCCC
T ss_pred CCccCCCCCCCCCCeEEEEEEECCCCCcCEEEccCCCceeeeeecCCCccCCcccceeeccccCCCCCchheeccccccC
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeeEEEEEEeeeEEeeeCCCCccEEEEEeCCCcccCCCCCCCCCChhhHHHHHHHHHHcccCCCceeEeCeecCHHHHHH
Q 040461 152 PGCFLRARAIGLMPMIDQGEKDDKIIAVCADDPEYKHYTDIKELPPHRLTEIRRFFEDYKKNENKKVAVNEFLPTSTAVE 231 (318)
Q Consensus 152 pG~Vv~vRvIGvL~MiDeGE~D~KIIaV~~~DP~~~~i~dI~DLp~~~l~eI~~FF~~YK~leGK~v~v~g~~d~e~A~k 231 (318)
||++++|||||+|+|+|+||.|||||||+++||++++++|++||+++++++|++||++||.++||++++.+|.|+++|++
T Consensus 81 ~G~vv~~r~iG~l~m~D~ge~D~Kiiav~~~dp~~~~i~~i~dl~~~~l~~I~~fF~~YK~~egK~v~v~g~~~~~~A~k 160 (173)
T d1twla_ 81 PLTIIEARPIGLFKMIDSGDKDYKVLAVPVEDPYFKDWKDIDDVPKAFLDEIAHFFKRYKELQGKEIIVEGWEGAEAAKR 160 (173)
T ss_dssp TTCEEEEEEEEEEEEEETTEECCEEEEEETTCGGGTTCCSGGGSCHHHHHHHHHHHHHTTGGGTCCEEEEEEEEHHHHHH
T ss_pred CceEEEEEEEEEEEeccCCCccceEEEEecCCchhhccCChHHCCHHHHHHHHHHHHHcCCCCCCceEEcCccCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcc
Q 040461 232 AIQYSMCVRPKL 243 (318)
Q Consensus 232 vI~ea~~~y~~~ 243 (318)
+|++|+++|++.
T Consensus 161 ~I~~~~~~y~~~ 172 (173)
T d1twla_ 161 EILRAIEMYKEK 172 (173)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHHhh
Confidence 999999999873
|
| >d2prda_ b.40.5.1 (A:) Inorganic pyrophosphatase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
| >d1e9ga_ b.40.5.1 (A:) Inorganic pyrophosphatase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1qeza_ b.40.5.1 (A:) Inorganic pyrophosphatase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]} | Back information, alignment and structure |
|---|
| >d1i40a_ b.40.5.1 (A:) Inorganic pyrophosphatase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|