Citrus Sinensis ID: 040489

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410---
MEFWFIILISISIAALLKAFISVIISPKYKTNLPPGPFNLPVIGNLQWLLKSFSEIEPILRNLHSKLGPVVTLFIGPRPAIFIADRSLAHKALVQNGAIFADRPRPLPTSKIVSSNQHNISSASYGTTWRLFRRNLSAEILHPSRVKSYKHARKWVLEILLNHLKSESKNGDRPVPVRVLDHFQYAMFCLLVLMCFGDKLDESQIKKIENVQRTQLLAFGNFNILNFWPRLSKIVFVKKWEQFLQMRRDQENVLVPLIRARKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEIVSLCSEFLNAGTDTTSTALQWIMANLVKHPHVQETVYTEIRGVVGENEEGPKYRVPLFLFICIPDLRIHMHLSLDDPECVRAIWYSEKEDKESFWNKSTVVEATYINIVRI
ccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccHHHHHHHHHHHccccEEEEcccccEEEEEcHHHHHHHHHHccccccccccccccccccccccccEEEccccHHHHHHHHHHHHHHccHHHHHcHHHHHHHHHHHHHHHHHHHcccccccccEEHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHccccccccHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHcccccccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHcHHHHHHHHHHHHHHccccccccccccccHHHHHHHHcccccccccccccHHcccccccccccEEEEEcccccccccccEEEc
ccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccEcccEcHHHHcccccccHHHHHHHHHHcccEEEEEEccccEEEEccHHHHHHHHHHccHHHccccccHHHHHHHHcccccEEEccccHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEcHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHccccHHHHHHHHHHccHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHccccccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHccccHHHHHccHHHHHHHHHHHHHccccccccccEEEEccEEcccccEEEEEEEEEcccccEEEEEc
MEFWFIILISISIAALLKAFISVIispkyktnlppgpfnlpviGNLQWLLKSFSEIEPILRNLhsklgpvvtlfigprpaifIADRSLAHKALVQngaifadrprplptskivssnqhnissasygTTWRLFRRNLsaeilhpsrvkSYKHARKWVLEILLNHLKseskngdrpvpvrVLDHFQYAMFCLLVLMCFGDKLDESQIKKIENVQRTQLlafgnfnilnfwPRLSKIVFVKKWEQFLQMRRDQENVLVPLIRARKKMKEEESLSIKEREYVLSYVDTLLdlqlpeekrKLSEEEIVSLCSEFLNAGTDTTSTALQWIMANLVKHPHVQETVYTEIrgvvgeneegpkyrvplflficipdlrihmhlslddpecVRAIWYsekedkesfwnKSTVVEATYINIVRI
MEFWFIILISISIAALLKAFISVIISPKYKTNLPPGPFNLPVIGNLQWLLKSFSEIEPILRNLHSKLGPVVTLFIGPRPAIFIADRSLAHKALVQNGAIFADRPRPLPtskivssnqhnissasygtTWRLFRRNLSAEilhpsrvksyKHARKWVLEILLNHlkseskngdrpVPVRVLDHFQYAMFCLLVLMCFGDKLDESQIKKIENVQRTQLLAFGNFNILNFWPRLSKIVFVKKWEQFLqmrrdqenvlvPLIRarkkmkeeeslsikereyvLSYVDTLLDLQLPEEKRKLSEEEIVSLCSEFLNAGTDTTSTALQWIMANLVKHPHVQETVYTEIRGVvgeneegpkyrVPLFLFICIPDLRIHMHLSLDDPECVRAIWYSekedkesfwnkstvveatyinivri
MEfwfiilisisiaallkafisVIISPKYKTNLPPGPFNLPVIGNLQWLLKSFSEIEPILRNLHSKLGPVVTLFIGPRPAIFIADRSLAHKALVQNGAIFADRPRPLPTSKIVSSNQHNISSASYGTTWRLFRRNLSAEILHPSRVKSYKHARKWVLEILLNHLKSESKNGDRPVPVRVLDHFQYAMFCLLVLMCFGDKLDESQIKKIENVQRTQLLAFGNFNILNFWPRLSKIVFVKKWEQFLQMRRDQENVLVPLIRARKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEIVSLCSEFLNAGTDTTSTALQWIMANLVKHPHVQETVYTEIRGVVGENEEGPKYRVPLFLFICIPDLRIHMHLSLDDPECVRAIWYSEKEDKESFWNKSTVVEATYINIVRI
**FWFIILISISIAALLKAFISVIISPKYKTNLPPGPFNLPVIGNLQWLLKSFSEIEPILRNLHSKLGPVVTLFIGPRPAIFIADRSLAHKALVQNGAIFAD*******************SASYGTTWRLFRRNLSAEILHPSRVKSYKHARKWVLEILLNHLK*******RPVPVRVLDHFQYAMFCLLVLMCFGDKLDESQIKKIENVQRTQLLAFGNFNILNFWPRLSKIVFVKKWEQFLQMRRDQENVLVPLIRA***********IKEREYVLSYVDTLLDLQLP*******EEEIVSLCSEFLNAGTDTTSTALQWIMANLVKHPHVQETVYTEIRGVVGENEEGPKYRVPLFLFICIPDLRIHMHLSLDDPECVRAIWYSEKEDKESFWNKSTVVEATYINIV**
MEFWFIILISISIAALLKAFIS***************FNLPVIGNLQWLLKSFSEIEPILRNLHSKLGPVVTLFIGPRPAIFIADRSLAHKALVQNGAIFADRPRPLPTSKIVSSNQHNISSASYGTTWRLFRRNLSAEILHPSRVKSYKHARKWVLEILLNH*************VRVLDHFQYAMFCLLVLMCFGDKLDESQIKKIENVQRTQLLAFGNFNILNFWPRLSKIVFVKKWEQFLQMRRDQENVLVPLIR********************SYVDTLLDLQLP**KRKLSEEEIVSLCSEFLNAGTDTTSTALQWIMANLVKHPHVQETVYTEIRGVVGENEEGPKYRVPLFLFICIPDLRIHMHLSLDDPECVRAIWYSEKEDKESFWNKSTVVEATYINIVRI
MEFWFIILISISIAALLKAFISVIISPKYKTNLPPGPFNLPVIGNLQWLLKSFSEIEPILRNLHSKLGPVVTLFIGPRPAIFIADRSLAHKALVQNGAIFADRPRPLPTSKIVSSNQHNISSASYGTTWRLFRRNLSAEILHPSRVKSYKHARKWVLEILLNHLKSESKNGDRPVPVRVLDHFQYAMFCLLVLMCFGDKLDESQIKKIENVQRTQLLAFGNFNILNFWPRLSKIVFVKKWEQFLQMRRDQENVLVPLIRARK********SIKEREYVLSYVDTLLDLQLPEEKRKLSEEEIVSLCSEFLNAGTDTTSTALQWIMANLVKHPHVQETVYTEIRGVVGENEEGPKYRVPLFLFICIPDLRIHMHLSLDDPECVRAIWYSEKEDKESFWNKSTVVEATYINIVRI
*EFWFIILISISIAALLKAFISVIISPKYKTNLPPGPFNLPVIGNLQWLLKSFSEIEPILRNLHSKLGPVVTLFIGPRPAIFIADRSLAHKALVQNGAIFADRPRPLPTSKIVSSNQHNISSASYGTTWRLFRRNLSAEILHPSRVKSYKHARKWVLEILLNHLKSESKNGDRPVPVRVLDHFQYAMFCLLVLMCFGDKLDESQIKKIENVQRTQLLAFGNFNILNFWPRLSKIVFVKKWEQFLQMRRDQENVLVPLIRARKKMKE************LSYVDTLLDLQLPEEKRKLSEEEIVSLCSEFLNAGTDTTSTALQWIMANLVKHPHVQETVYTEIRGVVGENEEGPKYRVPLFLFICIPDLRIHMHLSLDDPECVRAIWYSEKEDKESFWNKSTVVEATYINIVRI
iiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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SSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MEFWFIILISISIAALLKAFISVIISPKYKTNLPPGPFNLPVIGNLQWLLKSFSEIEPILRNLHSKLGPVVTLFIGPRPAIFIADRSLAHKALVQNGAIFADRPRPLPTSKIVSSNQHNISSASYGTTWRLFRRNLSAEILHPSRVKSYKHARKWVLEILLNHLKSESKNGDRPVPVRVLDHFQYAMFCLLVLMCFGDKLDESQIKKIENVQRTQLLAFGNFNILNFWPRLSKIVFVKKWEQFLQMRRDQENVLVPLIRARKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEIVSLCSEFLNAGTDTTSTALQWIMANLVKHPHVQETVYTEIRGVVGENEEGPKYRVPLFLFICIPDLRIHMHLSLDDPECVRAIWYSEKEDKESFWNKSTVVEATYINIVRI
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query413 2.2.26 [Sep-21-2011]
Q42602506 Cytochrome P450 89A2 OS=A no no 0.721 0.588 0.604 2e-99
Q9SRQ1 511 Cytochrome P450 89A9 OS=A no no 0.786 0.636 0.468 5e-85
O48928 513 Cytochrome P450 77A3 OS=G no no 0.803 0.647 0.369 1e-58
P37123499 Cytochrome P450 77A1 (Fra N/A no 0.769 0.637 0.373 8e-56
Q9LZ31512 Cytochrome P450 77A4 OS=A no no 0.813 0.656 0.361 4e-53
P37124511 Cytochrome P450 77A2 OS=S N/A no 0.726 0.587 0.356 1e-51
O48923510 Cytochrome P450 71D10 OS= no no 0.808 0.654 0.279 1e-26
P93147499 Isoflavone 2'-hydroxylase N/A no 0.806 0.667 0.284 6e-26
P98183495 Tabersonine 16-hydroxylas N/A no 0.782 0.652 0.286 8e-26
Q96514504 Cytochrome P450 71B7 OS=A no no 0.784 0.642 0.265 1e-22
>sp|Q42602|C89A2_ARATH Cytochrome P450 89A2 OS=Arabidopsis thaliana GN=CYP89A2 PE=2 SV=2 Back     alignment and function desciption
 Score =  362 bits (930), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 185/306 (60%), Positives = 238/306 (77%), Gaps = 8/306 (2%)

Query: 40  LPVIGNLQWLLKSFSEIEPILRNLHSKLGPVVTLFIGPRPAIFIADRSLAHKALVQNGAI 99
           LP +G LQWL +    +E  LR++H +LGP+VTL I  RPAIF+ADRSL H+ALV NGA+
Sbjct: 38  LPFLGTLQWLREGLGGLESYLRSVHHRLGPIVTLRITSRPAIFVADRSLTHEALVLNGAV 97

Query: 100 FADRPRPLPTSKIVSSNQHNISSASYGTTWRLFRRNLSAEILHPSRVKSYKHARKWVLEI 159
           +ADRP P   SKIV  ++HNISS SYG TWRL RRN+++EILHPSRV+SY HAR WVLEI
Sbjct: 98  YADRPPPAVISKIV--DEHNISSGSYGATWRLLRRNITSEILHPSRVRSYSHARHWVLEI 155

Query: 160 LLNHLKSESKNGDRPVPVRVLDHFQYAMFCLLVLMCFGDKLDESQIKKIENVQRTQLLAF 219
           L    ++    G+ P+ +  + H  YAMF LLVLMCFGDKLDE QIK++E +QR QLL+ 
Sbjct: 156 LFERFRNHG--GEEPIVL--IHHLHYAMFALLVLMCFGDKLDEKQIKEVEFIQRLQLLSL 211

Query: 220 GNFNILNFWPRLSKIVFVKKWEQFLQMRRDQENVLVPLIRARKKMKEEESLSIKE--REY 277
             FNI N WP+ +K++  K+W++FLQ+RR Q +VL+PLIRAR+K+ EE   S +E  ++Y
Sbjct: 212 TKFNIFNIWPKFTKLILRKRWQEFLQIRRQQRDVLLPLIRARRKIVEERKRSEQEDKKDY 271

Query: 278 VLSYVDTLLDLQLPEEKRKLSEEEIVSLCSEFLNAGTDTTSTALQWIMANLVKHPHVQET 337
           V SYVDTLLDL+LPEE RKL+EE+I++LCSEFL AGTDTT+TALQWIMANLVK+P +QE 
Sbjct: 272 VQSYVDTLLDLELPEENRKLNEEDIMNLCSEFLTAGTDTTATALQWIMANLVKYPEIQER 331

Query: 338 VYTEIR 343
           ++ EI+
Sbjct: 332 LHEEIK 337

Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: 4EC: .EC: -EC: .EC: -
>sp|Q9SRQ1|C89A9_ARATH Cytochrome P450 89A9 OS=Arabidopsis thaliana GN=CYP89A9 PE=2 SV=1 Back     alignment and function description
>sp|O48928|C77A3_SOYBN Cytochrome P450 77A3 OS=Glycine max GN=CYP77A3 PE=2 SV=1 Back     alignment and function description
>sp|P37123|C77A1_SOLME Cytochrome P450 77A1 (Fragment) OS=Solanum melongena GN=CYP77A1 PE=2 SV=1 Back     alignment and function description
>sp|Q9LZ31|C77A4_ARATH Cytochrome P450 77A4 OS=Arabidopsis thaliana GN=CYP77A4 PE=2 SV=1 Back     alignment and function description
>sp|P37124|C77A2_SOLME Cytochrome P450 77A2 OS=Solanum melongena GN=CYP77A2 PE=2 SV=1 Back     alignment and function description
>sp|O48923|C71DA_SOYBN Cytochrome P450 71D10 OS=Glycine max GN=CYP71D10 PE=2 SV=1 Back     alignment and function description
>sp|P93147|C81E1_GLYEC Isoflavone 2'-hydroxylase OS=Glycyrrhiza echinata GN=CYP81E1 PE=1 SV=2 Back     alignment and function description
>sp|P98183|C71DC_CATRO Tabersonine 16-hydroxylase (Fragment) OS=Catharanthus roseus GN=CYP71D12 PE=1 SV=1 Back     alignment and function description
>sp|Q96514|C71B7_ARATH Cytochrome P450 71B7 OS=Arabidopsis thaliana GN=CYP71B7 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query413
255566104 516 cytochrome P450, putative [Ricinus commu 0.840 0.672 0.632 1e-129
255566096 524 cytochrome P450, putative [Ricinus commu 0.888 0.700 0.604 1e-127
225454627 521 PREDICTED: cytochrome P450 89A2-like [Vi 0.823 0.652 0.628 1e-127
224101641509 cytochrome P450 [Populus trichocarpa] gi 0.876 0.711 0.614 1e-126
255557971 520 cytochrome P450, putative [Ricinus commu 0.832 0.661 0.631 1e-124
225454625 521 PREDICTED: cytochrome P450 89A2-like [Vi 0.813 0.644 0.633 1e-123
356521564500 PREDICTED: cytochrome P450 89A2-like [Gl 0.876 0.724 0.581 1e-123
224081184507 cytochrome P450 [Populus trichocarpa] gi 0.871 0.710 0.611 1e-123
224126173513 cytochrome P450 [Populus trichocarpa] gi 0.815 0.656 0.636 1e-123
46095226 518 ACT11D09.3 [Cucumis melo] 0.883 0.704 0.579 1e-122
>gi|255566104|ref|XP_002524040.1| cytochrome P450, putative [Ricinus communis] gi|223536767|gb|EEF38408.1| cytochrome P450, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  466 bits (1199), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 222/351 (63%), Positives = 287/351 (81%), Gaps = 4/351 (1%)

Query: 1   MEFWFIILISISIAALLKAFISVIISPKYKTNLPPGPFNLPVIGNLQWLLKSFSEIEPIL 60
           ME WF+I++++ I++L+K+  ++    K K +LPPGP   P+IGN+ WL KSF E+E I+
Sbjct: 1   METWFLIIVTLCISSLIKSLFNLFFQSK-KQSLPPGPVKFPIIGNVLWLRKSFFELESII 59

Query: 61  RNLHSKLGPVVTLFIGPRPAIFIADRSLAHKALVQNGAIFADRPRPLPTSKIVSSNQHNI 120
           R+LH +LGP++TL IG RP IFIADRSLAH+ALV+NG +FA+RPR   T+KI + NQH++
Sbjct: 60  RSLHKELGPMITLHIGSRPNIFIADRSLAHQALVRNGTVFANRPRAPATTKITTHNQHSV 119

Query: 121 SSASYGTTWRLFRRNLSAEILHPSRVKSYKHARKWVLEILLNHLKSESKNGDRPVPVRVL 180
           +SA YG TWRL RRNL++EILHPSRVKSY HARKWVLEILLN  +S+SK+GD   PV V+
Sbjct: 120 NSAFYGPTWRLLRRNLTSEILHPSRVKSYSHARKWVLEILLNRFESQSKSGD---PVLVV 176

Query: 181 DHFQYAMFCLLVLMCFGDKLDESQIKKIENVQRTQLLAFGNFNILNFWPRLSKIVFVKKW 240
           D+FQYAMFCLLVLMCFGDKLD+ QI++IE V+RT LL+   F+ LNF PRL+KIVF K+W
Sbjct: 177 DNFQYAMFCLLVLMCFGDKLDQKQIEEIERVERTGLLSIRRFDKLNFMPRLTKIVFRKRW 236

Query: 241 EQFLQMRRDQENVLVPLIRARKKMKEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEE 300
            +FLQ+++D+E VL+PLIRARKK+ EE        E+VLSYVDTL DLQLP+EKRKL E+
Sbjct: 237 SEFLQLQKDREEVLIPLIRARKKVNEEIKSKNCNNEFVLSYVDTLFDLQLPDEKRKLREK 296

Query: 301 EIVSLCSEFLNAGTDTTSTALQWIMANLVKHPHVQETVYTEIRGVVGENEE 351
           E+V+LC+EFLNAGTDTTSTALQW+MANLVK+P++QE ++ EI+ VV + EE
Sbjct: 297 EMVALCNEFLNAGTDTTSTALQWVMANLVKYPYIQEKLFMEIKSVVADGEE 347

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255566096|ref|XP_002524036.1| cytochrome P450, putative [Ricinus communis] gi|223536763|gb|EEF38404.1| cytochrome P450, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|225454627|ref|XP_002266611.1| PREDICTED: cytochrome P450 89A2-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|224101641|ref|XP_002334260.1| cytochrome P450 [Populus trichocarpa] gi|222870199|gb|EEF07330.1| cytochrome P450 [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255557971|ref|XP_002520014.1| cytochrome P450, putative [Ricinus communis] gi|223540778|gb|EEF42338.1| cytochrome P450, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|225454625|ref|XP_002266528.1| PREDICTED: cytochrome P450 89A2-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|356521564|ref|XP_003529424.1| PREDICTED: cytochrome P450 89A2-like [Glycine max] Back     alignment and taxonomy information
>gi|224081184|ref|XP_002306325.1| cytochrome P450 [Populus trichocarpa] gi|222855774|gb|EEE93321.1| cytochrome P450 [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224126173|ref|XP_002319774.1| cytochrome P450 [Populus trichocarpa] gi|222858150|gb|EEE95697.1| cytochrome P450 [Populus trichocarpa] Back     alignment and taxonomy information
>gi|46095226|gb|AAS80149.1| ACT11D09.3 [Cucumis melo] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query413
TAIR|locus:2045859512 AT2G12190 [Arabidopsis thalian 0.811 0.654 0.603 6.3e-108
TAIR|locus:2010886510 CYP89A5 ""cytochrome P450, fam 0.808 0.654 0.601 1.3e-107
TAIR|locus:2010841511 CYP89A6 ""cytochrome P450, fam 0.808 0.653 0.584 5.8e-105
TAIR|locus:2010781506 CYP89A2 ""cytochrome P450, fam 0.806 0.658 0.576 4.7e-103
TAIR|locus:2010831511 CYP89A7 ""cytochrome P450, fam 0.808 0.653 0.557 3.2e-97
TAIR|locus:2163223497 CYP89A3 ""cytochrome P450, fam 0.794 0.659 0.563 1.8e-94
TAIR|locus:2099714 511 CYP89A9 ""cytochrome P450, fam 0.757 0.612 0.487 7.4e-82
TAIR|locus:2180213512 CYP77A4 ""cytochrome P450, fam 0.799 0.644 0.360 1.1e-55
TAIR|locus:2184412509 CYP77A9 ""cytochrome P450, fam 0.760 0.616 0.388 1.1e-53
TAIR|locus:2075830514 UNE9 "UNFERTILIZED EMBRYO SAC 0.743 0.597 0.380 1.3e-52
TAIR|locus:2045859 AT2G12190 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1067 (380.7 bits), Expect = 6.3e-108, P = 6.3e-108
 Identities = 210/348 (60%), Positives = 264/348 (75%)

Query:    33 LPPGPFNLPVIGNLQWLLKSFSEIEPILRNLHSKLGPVVTLFIGPRPAIFIADRSLAHKA 92
             LPP P   P +G LQWL +    +   LR++H +LGP++TL I  RPAIF+ADRSLAH+A
Sbjct:    32 LPPDPNFFPFLGTLQWLRQGLGGLNNYLRSVHHRLGPIITLRITSRPAIFVADRSLAHQA 91

Query:    93 LVQNGAIFADRPRPLPTSKIVSSNQHNISSASYGTTWRLFRRNLSAEILHPSRVKSYKHA 152
             LV NGA+FADRP   P SKI+SSNQHNISS+ YG TWRL RRNL++EILHPSRV+SY HA
Sbjct:    92 LVLNGAVFADRPPAAPISKIISSNQHNISSSLYGATWRLLRRNLTSEILHPSRVRSYSHA 151

Query:   153 RKWVLEILLNHLKSESKNGDRPVPVRVLDHFQYAMFCLLVLMCFGDKLDESQIKKIENVQ 212
             R+WVLEIL +    +S+ G+ P+ V  +DH  YAMF LLVLMCFGDKLDE QIK++E VQ
Sbjct:   152 RRWVLEILFDRF-GKSR-GEEPIVV--VDHLHYAMFALLVLMCFGDKLDEKQIKQVEYVQ 207

Query:   213 RTQLLAFGNFNILNFWPRLSKIVFVKKWEQFLQMRRDQENVLVPLIRARKKMKEE-ESLS 271
             R QLL F  FNILN WP+ +K++  K+WE+F QMRR+Q +VL+PLIRAR+K+ EE ++ S
Sbjct:   208 RRQLLGFSRFNILNLWPKFTKLILRKRWEEFFQMRREQHDVLLPLIRARRKIVEERKNRS 267

Query:   272 IKERE----YVLSYVDTLLDLQLPEEKRKLSEEEIVSLCSEFLNAGTDTTSTALQWIMAN 327
              +E E    YV SYVDTLL+L+LP+EKRKL+E+EIVSLCSEFLN GTDTT+TALQWIMAN
Sbjct:   268 SEEEEDNKVYVQSYVDTLLELELPDEKRKLNEDEIVSLCSEFLNGGTDTTATALQWIMAN 327

Query:   328 LVKHPHVQETVYTEIRGVVGEN----EEGPKYRVPLFLFICIPDLRIH 371
             LVK+P +Q+ +Y EI+ VVGE     EE    ++P    + +  LR H
Sbjct:   328 LVKNPEIQKRLYEEIKSVVGEEAKEVEEEDAQKMPYLKAVVMEGLRRH 375
GO:0005506 "iron ion binding" evidence=IEA
GO:0009055 "electron carrier activity" evidence=IEA
GO:0016705 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen" evidence=IEA
GO:0019825 "oxygen binding" evidence=ISS
GO:0020037 "heme binding" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
TAIR|locus:2010886 CYP89A5 ""cytochrome P450, family 89, subfamily A, polypeptide 5"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2010841 CYP89A6 ""cytochrome P450, family 87, subfamily A, polypeptide 6"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2010781 CYP89A2 ""cytochrome P450, family 89, subfamily A, polypeptide 2"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2010831 CYP89A7 ""cytochrome P450, family 87, subfamily A, polypeptide 7"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2163223 CYP89A3 ""cytochrome P450, family 89, subfamily A, polypeptide 3"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2099714 CYP89A9 ""cytochrome P450, family 87, subfamily A, polypeptide 9"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2180213 CYP77A4 ""cytochrome P450, family 77, subfamily A, polypeptide 4"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2184412 CYP77A9 ""cytochrome P450, family 77, subfamily A, polypeptide 9"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2075830 UNE9 "UNFERTILIZED EMBRYO SAC 9" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
CYP89A17
cytochrome P450 (507 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query413
PLN00168 519 PLN00168, PLN00168, Cytochrome P450; Provisional 1e-112
pfam00067461 pfam00067, p450, Cytochrome P450 1e-45
PLN03112 514 PLN03112, PLN03112, cytochrome P450 family protein 1e-26
PLN00110504 PLN00110, PLN00110, flavonoid 3',5'-hydroxylase (F 2e-19
PLN02687 517 PLN02687, PLN02687, flavonoid 3'-monooxygenase 7e-18
PLN02655466 PLN02655, PLN02655, ent-kaurene oxidase 8e-18
PLN02183516 PLN02183, PLN02183, ferulate 5-hydroxylase 1e-17
PLN02394503 PLN02394, PLN02394, trans-cinnamate 4-monooxygenas 4e-17
PLN03018 534 PLN03018, PLN03018, homomethionine N-hydroxylase 2e-16
PLN02966 502 PLN02966, PLN02966, cytochrome P450 83A1 3e-16
PLN03234499 PLN03234, PLN03234, cytochrome P450 83B1; Provisio 3e-16
PTZ00404482 PTZ00404, PTZ00404, cytochrome P450; Provisional 2e-15
PLN02971 543 PLN02971, PLN02971, tryptophan N-hydroxylase 2e-13
COG2124411 COG2124, CypX, Cytochrome P450 [Secondary metaboli 2e-09
PLN02302490 PLN02302, PLN02302, ent-kaurenoic acid oxidase 5e-05
PLN02290516 PLN02290, PLN02290, cytokinin trans-hydroxylase 1e-04
PLN02196463 PLN02196, PLN02196, abscisic acid 8'-hydroxylase 0.003
>gnl|CDD|215086 PLN00168, PLN00168, Cytochrome P450; Provisional Back     alignment and domain information 
 Score =  339 bits (871), Expect = e-112
 Identities = 160/364 (43%), Positives = 241/364 (66%), Gaps = 19/364 (5%)

Query: 1   MEFWFIILISISIAALLKAFISVIISP------KYKTNLPPGPFNLPVIGNLQWLLKSFS 54
           M+   ++L++     LL   + +++        K    LPPGP  +P++G+L WL  S +
Sbjct: 1   MDATQLLLLAA---LLLLPLLLLLLGKHGGRGGKKGRRLPPGPPAVPLLGSLVWLTNSSA 57

Query: 55  EIEPILRNLHSKLGPVVTLFIGPRPAIFIADRSLAHKALVQNGAIFADRPRPLPTSKIVS 114
           ++EP+LR L ++ GPVV+L +G R ++F+ADR LAH ALV+ GA  ADRP  + +S+++ 
Sbjct: 58  DVEPLLRRLIARYGPVVSLRVGSRLSVFVADRRLAHAALVERGAALADRP-AVASSRLLG 116

Query: 115 SNQHNISSASYGTTWRLFRRNLSAEILHPSRVKSYKHARKWVLEILLNHLKSESKNGDRP 174
            + + I+ +SYG  WRL RRNL AE LHPSRV+ +  AR WV  +L++ L+ E+++   P
Sbjct: 117 ESDNTITRSSYGPVWRLLRRNLVAETLHPSRVRLFAPARAWVRRVLVDKLRREAEDAAAP 176

Query: 175 VPVRVLDHFQYAMFCLLVLMCFGDKLDESQIKKIENVQRTQLLAFG-NFNILNFWPRLSK 233
              RV++ FQYAMFCLLVLMCFG++LDE  ++ I   QR  LL      ++  F+P ++K
Sbjct: 177 ---RVVETFQYAMFCLLVLMCFGERLDEPAVRAIAAAQRDWLLYVSKKMSVFAFFPAVTK 233

Query: 234 IVFVKKWEQFLQMRRDQENVLVPLIRARKKMKEE--ESLSIKEREYVL--SYVDTLLDLQ 289
            +F  + ++ L +RR Q+ + VPLI AR++ K    +     ++E     SYVDTLLD++
Sbjct: 234 HLFRGRLQKALALRRRQKELFVPLIDARREYKNHLGQGGEPPKKETTFEHSYVDTLLDIR 293

Query: 290 LPEE-KRKLSEEEIVSLCSEFLNAGTDTTSTALQWIMANLVKHPHVQETVYTEIRGVVGE 348
           LPE+  R L+++EIV+LCSEFLNAGTDTTSTALQWIMA LVK+P +Q  ++ EI+   G+
Sbjct: 294 LPEDGDRALTDDEIVNLCSEFLNAGTDTTSTALQWIMAELVKNPSIQSKLHDEIKAKTGD 353

Query: 349 NEEG 352
           ++E 
Sbjct: 354 DQEE 357

Length = 519
>gnl|CDD|215689 pfam00067, p450, Cytochrome P450 Back     alignment and domain information
>gnl|CDD|215583 PLN03112, PLN03112, cytochrome P450 family protein; Provisional Back     alignment and domain information
>gnl|CDD|177725 PLN00110, PLN00110, flavonoid 3',5'-hydroxylase (F3'5'H); Provisional Back     alignment and domain information
>gnl|CDD|215371 PLN02687, PLN02687, flavonoid 3'-monooxygenase Back     alignment and domain information
>gnl|CDD|215354 PLN02655, PLN02655, ent-kaurene oxidase Back     alignment and domain information
>gnl|CDD|165828 PLN02183, PLN02183, ferulate 5-hydroxylase Back     alignment and domain information
>gnl|CDD|215221 PLN02394, PLN02394, trans-cinnamate 4-monooxygenase Back     alignment and domain information
>gnl|CDD|178592 PLN03018, PLN03018, homomethionine N-hydroxylase Back     alignment and domain information
>gnl|CDD|178550 PLN02966, PLN02966, cytochrome P450 83A1 Back     alignment and domain information
>gnl|CDD|178773 PLN03234, PLN03234, cytochrome P450 83B1; Provisional Back     alignment and domain information
>gnl|CDD|173595 PTZ00404, PTZ00404, cytochrome P450; Provisional Back     alignment and domain information
>gnl|CDD|166612 PLN02971, PLN02971, tryptophan N-hydroxylase Back     alignment and domain information
>gnl|CDD|225035 COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|215171 PLN02302, PLN02302, ent-kaurenoic acid oxidase Back     alignment and domain information
>gnl|CDD|215164 PLN02290, PLN02290, cytokinin trans-hydroxylase Back     alignment and domain information
>gnl|CDD|177847 PLN02196, PLN02196, abscisic acid 8'-hydroxylase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 413
KOG0156489 consensus Cytochrome P450 CYP2 subfamily [Secondar 100.0
PLN02971 543 tryptophan N-hydroxylase 100.0
PLN00168 519 Cytochrome P450; Provisional 100.0
PLN03234499 cytochrome P450 83B1; Provisional 100.0
PLN02183 516 ferulate 5-hydroxylase 100.0
PLN00110 504 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional 100.0
PLN02687 517 flavonoid 3'-monooxygenase 100.0
KOG0158499 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subf 100.0
PLN02966502 cytochrome P450 83A1 100.0
PLN03112 514 cytochrome P450 family protein; Provisional 100.0
PLN02394503 trans-cinnamate 4-monooxygenase 100.0
PLN02290516 cytokinin trans-hydroxylase 100.0
PLN03018 534 homomethionine N-hydroxylase 100.0
PTZ00404482 cytochrome P450; Provisional 100.0
PLN02655466 ent-kaurene oxidase 100.0
PLN02500490 cytochrome P450 90B1 100.0
KOG0157497 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfami 100.0
PLN02169500 fatty acid (omega-1)-hydroxylase/midchain alkane h 100.0
KOG0159519 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 100.0
PF00067463 p450: Cytochrome P450 p450 superfamily signature b 100.0
PLN03195516 fatty acid omega-hydroxylase; Provisional 100.0
PLN02196463 abscisic acid 8'-hydroxylase 100.0
PLN02774463 brassinosteroid-6-oxidase 100.0
PLN02302490 ent-kaurenoic acid oxidase 100.0
PLN02936 489 epsilon-ring hydroxylase 100.0
PLN03141452 3-epi-6-deoxocathasterone 23-monooxygenase; Provis 100.0
PLN02738 633 carotene beta-ring hydroxylase 100.0
PLN02987472 Cytochrome P450, family 90, subfamily A 100.0
PLN02426502 cytochrome P450, family 94, subfamily C protein 100.0
PLN02648480 allene oxide synthase 100.0
KOG0684486 consensus Cytochrome P450 [Secondary metabolites b 100.0
COG2124411 CypX Cytochrome P450 [Secondary metabolites biosyn 99.97
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information 
Probab=100.00  E-value=1.9e-61  Score=472.20  Aligned_cols=365  Identities=30%  Similarity=0.442  Sum_probs=304.4

Q ss_pred             CCCCCCCCcccccccchhhhhccCCchHHHHHHHhhcCCeEEEEcCCccEEEEeChHHHHHHHHhcCcccccCCCCCCCc
Q 040489           31 TNLPPGPFNLPVIGNLQWLLKSFSEIEPILRNLHSKLGPVVTLFIGPRPAIFIADRSLAHKALVQNGAIFADRPRPLPTS  110 (413)
Q Consensus        31 ~~~~PgP~~~pl~G~l~~~~~~~~~~~~~~~~~~~kyG~i~~~~~g~~~~v~i~dpe~i~~il~~~~~~f~~r~~~~~~~  110 (413)
                      .++||||++||++||++++...  .+|..+.+|.++|||+|.+|+|+.|+|+|+|+++++|+|++++..|.+|+......
T Consensus        25 ~~lPPGP~~lPiIGnl~~l~~~--~~h~~~~~ls~~yGpi~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~~~~~  102 (489)
T KOG0156|consen   25 RNLPPGPPPLPIIGNLHQLGSL--PPHRSFRKLSKKYGPVFTLRLGSVPVVVISSYEAAKEVLVKQDLEFADRPDPTATL  102 (489)
T ss_pred             CCCCcCCCCCCccccHHHcCCC--chhHHHHHHHHHhCCeEEEEecCceEEEECCHHHHHHHHHhCCccccCCCCchhhH
Confidence            4899999999999999999643  58999999999999999999999999999999999999999999999998722233


Q ss_pred             ccccCCCcceEeccCChhHHHHHHHHhhhhcCHHHHhHHHHHHHHHHHHHHHHHHhhccCCCCCcccchHHHHHHHHHHH
Q 040489          111 KIVSSNQHNISSASYGTTWRLFRRNLSAEILHPSRVKSYKHARKWVLEILLNHLKSESKNGDRPVPVRVLDHFQYAMFCL  190 (413)
Q Consensus       111 ~~~~~~~~~i~~~~~g~~w~~~Rk~~~~~~~s~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~vd~~~~~~~~~~~v  190 (413)
                      ..++.++.++.++.+|+.||.+||.....+++++.++++...+.++++.+++.+.+ ...+   ++||+.+.+..++.+|
T Consensus       103 ~~~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R~~E~~~l~~~l~~-~~~~---~~vdl~~~l~~~~~nv  178 (489)
T KOG0156|consen  103 KYLSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIREEEVDELVKKLSK-SKKG---EPVDLSELLDLLVGNV  178 (489)
T ss_pred             HHhcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHHHHHHHHHHHHHHh-cCCC---ceeeHHHHHHHHHHHH
Confidence            55565567888877999999999999999999999999998889999999999987 2222   6899999999999999


Q ss_pred             HHHHHhcCCCCh---HHHHHHHHHHHHHHHHhcCCccccccc-ccchhhch-hHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 040489          191 LVLMCFGDKLDE---SQIKKIENVQRTQLLAFGNFNILNFWP-RLSKIVFV-KKWEQFLQMRRDQENVLVPLIRARKKMK  265 (413)
Q Consensus       191 i~~~~fG~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~p-~l~~~~~~-~~~~~~~~~~~~~~~~i~~~i~~r~~~~  265 (413)
                      |++++||.++..   +...++...........+.+.+.+++| ++..+... ...++......++..++++.|+++++..
T Consensus       179 I~~~~fG~rf~~~~~~~~~~~~~l~~~~~~~~~~~~~~d~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~i~eh~~~~  258 (489)
T KOG0156|consen  179 ICRMLFGRRFEEEDEEEFLELKELVEESLELLGSFNLSDYFPFLLRWLDGISGLEKRLKKVSKRLDEFLERIIDEHREKI  258 (489)
T ss_pred             HHHHHhCCccccCCchHHHHHHHHHHHHHHHhCCccHHHHhhHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence            999999999964   334457777777777777777778888 44433221 2233444444557889999998886654


Q ss_pred             hhhhhhhhhhhhhhhHHHHHHhccCCcccCCCCHHHHHHHHHHHhhcccccHHHHHHHHHHHHhhChHHHHHHHHHHHhh
Q 040489          266 EEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEIVSLCSEFLNAGTDTTSTALQWIMANLVKHPHVQETVYTEIRGV  345 (413)
Q Consensus       266 ~~~~~~~~~~~~~~~~ld~ll~~~~~~~~~~lt~~ei~~~~~~~l~AG~dTTa~tl~w~~~~La~~P~vq~Kl~eEi~~v  345 (413)
                       +..      +. .|++|.||+...+++...+|+++|...|+++++||.||||+|+.|++.+|++||+||+|+++||+++
T Consensus       259 -~~~------~~-~D~vD~lL~~~~~~~~~~~t~~~i~~~~~dl~~AGtdTta~Tl~Wa~a~Ll~~Pev~~K~qeEId~v  330 (489)
T KOG0156|consen  259 -GDE------EG-RDFVDALLKLMKEEKAEGLTDDHLKALILDLFLAGTDTTATTLEWAMAELLNNPEVQKKLQEEIDEV  330 (489)
T ss_pred             -ccC------CC-CcHHHHHHHhhcccccCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence             111      11 4899999987643232239999999999999999999999999999999999999999999999999


Q ss_pred             hcCCCC---CCCCCChhHHHhhhccccccCCCCCCCcchhhhhhhccccccccccccccccceeeeeeecC
Q 040489          346 VGENEE---GPKYRVPLFLFICIPDLRIHMHLSLDDPECVRAIWYSEKEDKESFWNKSTVVEATYINIVRI  413 (413)
Q Consensus       346 ~g~~~~---~~~~~lpyl~avikEtlRl~pp~~~~~pr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  413 (413)
                      +|.+..   +|+.+||||+|||+||+|+||++|+.+||.+.+    +-.=.+++.+++|.|..+.|||-|+
T Consensus       331 vG~~r~v~e~D~~~lpYL~Avi~E~~Rl~p~~Pl~~ph~~~~----d~~i~Gy~IPkgT~v~vn~~ai~rD  397 (489)
T KOG0156|consen  331 VGKGRLVSESDLPKLPYLKAVIKETLRLHPPLPLLLPRETTE----DTKIGGYDIPKGTTVLVNLWAIHRD  397 (489)
T ss_pred             hCCCCCCChhhhccCHHHHHHHHHHHhcCCCccccccccccC----CeeEcCEEcCCCCEEEEeehhhhcC
Confidence            997752   999999999999999999999999999998876    2234679999999999999999874

>PLN02971 tryptophan N-hydroxylase Back     alignment and domain information
>PLN00168 Cytochrome P450; Provisional Back     alignment and domain information
>PLN03234 cytochrome P450 83B1; Provisional Back     alignment and domain information
>PLN02183 ferulate 5-hydroxylase Back     alignment and domain information
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional Back     alignment and domain information
>PLN02687 flavonoid 3'-monooxygenase Back     alignment and domain information
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PLN02966 cytochrome P450 83A1 Back     alignment and domain information
>PLN03112 cytochrome P450 family protein; Provisional Back     alignment and domain information
>PLN02394 trans-cinnamate 4-monooxygenase Back     alignment and domain information
>PLN02290 cytokinin trans-hydroxylase Back     alignment and domain information
>PLN03018 homomethionine N-hydroxylase Back     alignment and domain information
>PTZ00404 cytochrome P450; Provisional Back     alignment and domain information
>PLN02655 ent-kaurene oxidase Back     alignment and domain information
>PLN02500 cytochrome P450 90B1 Back     alignment and domain information
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism] Back     alignment and domain information
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase Back     alignment and domain information
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PF00067 p450: Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature; InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry Back     alignment and domain information
>PLN03195 fatty acid omega-hydroxylase; Provisional Back     alignment and domain information
>PLN02196 abscisic acid 8'-hydroxylase Back     alignment and domain information
>PLN02774 brassinosteroid-6-oxidase Back     alignment and domain information
>PLN02302 ent-kaurenoic acid oxidase Back     alignment and domain information
>PLN02936 epsilon-ring hydroxylase Back     alignment and domain information
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional Back     alignment and domain information
>PLN02738 carotene beta-ring hydroxylase Back     alignment and domain information
>PLN02987 Cytochrome P450, family 90, subfamily A Back     alignment and domain information
>PLN02426 cytochrome P450, family 94, subfamily C protein Back     alignment and domain information
>PLN02648 allene oxide synthase Back     alignment and domain information
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query413
3ruk_A 494 Human Cytochrome P450 Cyp17a1 In Complex With Abira 5e-15
3pm0_A 507 Structural Characterization Of The Complex Between 2e-14
4i8v_A491 Human Cytochrome P450 1a1 In Complex With Alpha-nap 1e-13
1w0e_A 485 Crystal Structure Of Human Cytochrome P450 3a4 Leng 3e-13
1tqn_A 486 Crystal Structure Of Human Microsomal P450 3a4 Leng 3e-13
3ua1_A 487 Crystal Structure Of The Cytochrome P4503a4-Bromoer 4e-13
1pq2_A 476 Crystal Structure Of Human Drug Metabolizing Cytoch 4e-12
1dt6_A473 Structure Of Mammalian Cytochrome P450 2c5 Length = 5e-12
4gqs_A477 Structure Of Human Microsomal Cytochrome P450 (cyp) 4e-11
1r9o_A477 Crystal Structure Of P4502c9 With Flurbiprofen Boun 1e-10
1og2_A475 Structure Of Human Cytochrome P450 Cyp2c9 Length = 1e-10
3ebs_A476 Human Cytochrome P450 2a6 I208sI300FG301AS369G IN C 3e-10
2p85_A476 Structure Of Human Lung Cytochrome P450 2a13 With I 4e-10
1z10_A476 Crystal Structure Of Human Microsomal P450 2a6 With 6e-10
2hi4_A 495 Crystal Structure Of Human Microsomal P450 1a2 In C 9e-10
2pg7_A476 Crystal Structure Of Human Microsomal P450 2a6 N297 2e-09
2pg5_A476 Crystal Structure Of Human Microsomal P450 2a6 N297 2e-09
3e4e_A476 Human Cytochrome P450 2e1 In Complex With The Inhib 2e-09
2pg6_A476 Crystal Structure Of Human Microsomal P450 2a6 L240 4e-09
3qz1_A 496 Crystal Structure Of Bovine Steroid Of 21-Hydroxyla 6e-09
3qm4_A479 Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Compl 7e-07
2q6n_A478 Structure Of Cytochrome P450 2b4 With Bound 1-(4- C 2e-06
4h1n_A479 Crystal Structure Of P450 2b4 F297a Mutant In Compl 2e-06
1suo_A476 Structure Of Mammalian Cytochrome P450 2b4 With Bou 2e-06
3tk3_A476 Cytochrome P450 2b4 Mutant L437a In Complex With 4- 2e-06
1po5_A476 Structure Of Mammalian Cytochrome P450 2b4 Length = 2e-06
3eqm_A503 Crystal Structure Of Human Placental Aromatase Cyto 3e-06
2f9q_A479 Crystal Structure Of Human Cytochrome P450 2d6 Leng 3e-06
3czh_A481 Crystal Structure Of Cyp2r1 In Complex With Vitamin 1e-05
3c6g_A479 Crystal Structure Of Cyp2r1 In Complex With Vitamin 1e-05
3ibd_A476 Crystal Structure Of A Cytochrome P450 2b6 Genetic 1e-04
3k9v_A482 Crystal Structure Of Rat Mitochondrial P450 24a1 S5 1e-04
3ld6_A461 Crystal Structure Of Human Lanosterol 14alpha-Demet 5e-04
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone Length = 494 Back     alignment and structure 
Iteration: 1

 Score = 79.0 bits (193), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 76/342 (22%), Positives = 158/342 (46%), Gaps = 42/342 (12%)
Query: 25  ISPKYKTNLPPGPFNLPVIGNLQWLLKSFSEIEPILRNLHSKLGPVVTLFIGPRPAIFIA 84
           ++ K     P    +LP++G+L +L +    +      L  K GP+ ++ +G +  + + 
Sbjct: 1   MAKKTGAKYPKSLLSLPLVGSLPFLPRH-GHMHNNFFKLQKKYGPIYSVRMGTKTTVIVG 59
Query: 85  DRSLAHKALVQNGAIFADRPRPLPTSKIVSSNQHNISSASYGTTWRLFRRNLSAEILHPS 144
              LA + L++ G  F+ RP+ + T  I S+N+  I+ A  G  W+L RR      L  +
Sbjct: 60  HHQLAKEVLIKKGKDFSGRPQ-MATLDIASNNRKGIAFADSGAHWQLHRR------LAMA 112
Query: 145 RVKSYKHARKWVLEILLNHLKS-----ESKNG---DRPVPVRVLDHFQYAMFCLLVLMCF 196
               +K   + + +I+   + +      + NG   D   PV V      A+  ++ L+CF
Sbjct: 113 TFALFKDGDQKLEKIICQEISTLCDMLATHNGQSIDISFPVFV------AVTNVISLICF 166
Query: 197 GD--KLDESQIKKIENVQRTQLLAFGNFNILNFWPRLSKIVFVKKWEQFLQMRRDQENVL 254
               K  + ++  I+N     +      ++++  P L KI   K  E+     + + ++L
Sbjct: 167 NTSYKNGDPELNVIQNYNEGIIDNLSKDSLVDLVPWL-KIFPNKTLEKLKSHVKIRNDLL 225
Query: 255 VPLIRARKKMKEEESLSIKEREYVLSYVDTLLDLQL--------PEEKRKL-SEEEIVSL 305
             ++   K+    +S++        + +DTL+  ++        P++  +L S+  I++ 
Sbjct: 226 NKILENYKEKFRSDSIT--------NMLDTLMQAKMNSDNGNAGPDQDSELLSDNHILTT 277
Query: 306 CSEFLNAGTDTTSTALQWIMANLVKHPHVQETVYTEIRGVVG 347
             +   AG +TT++ ++W +A L+ +P V++ +Y EI   VG
Sbjct: 278 IGDIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQNVG 319
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha- Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1) Length = 507 Back     alignment and structure
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With Alpha-naphthoflavone Length = 491 Back     alignment and structure
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4 Length = 485 Back     alignment and structure
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4 Length = 486 Back     alignment and structure
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome P4503a4-Bromoergocryptine Complex Length = 487 Back     alignment and structure
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome P450 2c8 Length = 476 Back     alignment and structure
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5 Length = 473 Back     alignment and structure
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19 Length = 477 Back     alignment and structure
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound Length = 477 Back     alignment and structure
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9 Length = 475 Back     alignment and structure
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX With Phenacetin Length = 476 Back     alignment and structure
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole Bound In Two Alternate Conformations Length = 476 Back     alignment and structure
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With Coumarin Bound Length = 476 Back     alignment and structure
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex With Alpha-Naphthoflavone Length = 495 Back     alignment and structure
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V Length = 476 Back     alignment and structure
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q Length = 476 Back     alignment and structure
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4- Methylpyrazole Length = 476 Back     alignment and structure
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q Length = 476 Back     alignment and structure
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase (P450c21) Length = 496 Back     alignment and structure
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex Length = 479 Back     alignment and structure
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4- Cholorophenyl)imidazole Length = 478 Back     alignment and structure
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With Anti- Platelet Drug Clopidogrel Length = 479 Back     alignment and structure
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound 4-(4- Chlorophenyl)imidazole Length = 476 Back     alignment and structure
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With 4-(4-Chlorophenyl) Imidazole Length = 476 Back     alignment and structure
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 Length = 476 Back     alignment and structure
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome P450 In Complex With Androstenedione Length = 503 Back     alignment and structure
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6 Length = 479 Back     alignment and structure
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2 Length = 481 Back     alignment and structure
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3 Length = 479 Back     alignment and structure
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant In Complex With The Inhibitor 4-(4-Chlorophenyl)imidazole Length = 476 Back     alignment and structure
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In Complex With Chaps Length = 482 Back     alignment and structure
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase (C Complex With Ketoconazole Length = 461 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query413
3n9y_A487 Cholesterol SIDE-chain cleavage enzyme; cytochrome 3e-51
3k9v_A482 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitocho 3e-47
3dax_A 491 Cytochrome P450 7A1; cholesterol, cholesterol 7-al 1e-42
3swz_A 494 Steroid 17-alpha-hydroxylase/17,20 lyase; cytochro 3e-41
2hi4_A 495 Cytochrome P450 1A2; CYP1A2, monooxygenase, drug m 2e-38
3qz1_A 496 Steroid 21-hydroxylase; P450 monooxygenase, oxidor 5e-38
3pm0_A 507 Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase 4e-37
3czh_A481 Cytochrome P450 2R1; vitamin D, vitamin S 25-hydro 1e-36
3b6h_A 498 Prostacyclin synthase; enzyme-inhibitor complex, C 3e-36
3tbg_A479 Cytochrome P450 2D6; monooxygenase, thioridazine, 1e-34
3s79_A503 Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD 5e-34
3e6i_A476 CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, mono 2e-32
1po5_A476 Cytochrome P450 2B4; oxidoreductase, membrane prot 5e-32
3b98_A 475 Prostaglandin I2 synthase; prostacyclin synthase, 9e-32
2fdv_A476 Cytochrome P450 2A6; CYP2A6, monooxygenase, drug m 4e-31
1r9o_A477 Cytochrome P450 2C9; monooxygenase, drug metaboliz 9e-31
2cib_A455 Cytochrome P450 51; heme, heme lipid synthesis, me 2e-29
2ve3_A444 Putative cytochrome P450 120; oxidoreductase, mono 4e-29
3dbg_A467 Putative cytochrome P450; cytochrome P450 oxidored 4e-24
2ij2_A 470 Cytochrome P450 BM3; monoxygenase, heme binding pr 6e-24
3i3k_A461 Lanosterol 14-alpha demethylase; cytochrome P450, 1e-22
3awm_A415 Fatty acid alpha-hydroxylase; cytochrome P450, per 2e-21
1izo_A417 P450bsbeta, cytochrome P450 152A1; heme protein, p 2e-21
3mdm_A 456 Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, th 2e-20
3gw9_A450 Sterol 14alpha-demethylase; CYP51, cytochrome P450 3e-20
3nxu_A 485 Cytochrome P450 3A4; alpha beta protein, cytochrom 1e-16
1n97_A389 CYP175A1; electron transport; HET: SRT HEM; 1.80A 2e-14
3dsk_A495 Cytochrome P450 74A, chloroplast; P450 fold, fatty 8e-13
3dan_A473 Cytochrome P450 74A2; AOS heme cytochrome P450 str 1e-09
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-04
2uuq_A414 CYP130, cytochrome P450 130; iron, heme, monooxyge 4e-05
3nc3_A441 Cytochrome P450 CYPX; cytochrome P450 oxidase, HAE 6e-05
3lxh_A421 Cytochrome P450; heme, iron, metal-binding, monoox 7e-05
2zwu_A415 Camphor 5-monooxygenase; P450CAM, camphor-hydroxyl 1e-04
4dxy_A417 Cytochrome P450, CYP101D2; cytochrome P450 mutant, 1e-04
3oft_A396 Cytochrome P450, CYP101C1; oxidoreductase; HET: HE 1e-04
4fb2_A398 P450CIN; heme, monooxygenase, cindoxin, oxidoreduc 2e-04
4dnj_A412 Putative cytochrome P450; oxidoreductase; HET: HEM 2e-04
2jjn_A411 Cytochrome P450 113A1; oxidoreductase, iron, heme, 3e-04
2wiy_A394 XPLA-heme, cytochrome P450-like protein XPLA; CYT- 7e-04
2rfb_A343 Cytochrome P450; heme, iron, metal-binding, monoox 7e-04
2xkr_A398 CYP142, putative cytochrome P450 142; oxidoreducta 8e-04
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A* Length = 487 Back     alignment and structure
 Score =  178 bits (454), Expect = 3e-51
 Identities = 54/326 (16%), Positives = 107/326 (32%), Gaps = 15/326 (4%)

Query: 32  NLPPGPFNLPVIGNL-QWLLKSFSEIEPILRNLHSKLGPVVTLFIGPRPAIFIADRSLAH 90
           N  P P +   +     W      ++         K GP+    +G   ++++ D     
Sbjct: 9   NEIPSPGDNGWLNLYHFWRETGTHKVHLHHVQNFQKYGPIYREKLGNVESVYVIDPEDVA 68

Query: 91  KALVQNGAIFADRPRPLPTSKIVSSNQHNISSASYGTTWRLFRRNLSAEILHPSRVKSYK 150
                 G        P   +      +           W+  R  L+ E++ P   K++ 
Sbjct: 69  LLFKSEGPNPERFLIPPWVAYHQYYQRPIGVLLKKSAAWKKDRVALNQEVMAPEATKNFL 128

Query: 151 HARKWVLEILLNHL-KSESKNGDRPVPVRVLDHFQYAMFCLLVLMCFGDK---LDESQIK 206
                V    ++ L +   K G       + D      F  +  + FG++   L+E    
Sbjct: 129 PLLDAVSRDFVSVLHRRIKKAGSGNYSGDISDDLFRFAFESITNVIFGERQGMLEEVVNP 188

Query: 207 KIENVQRTQLLAFG-NFNILNFWPRLSKIVFVKKWEQFLQMRRDQENVLVPLIRARKKMK 265
           + +         F  +  +LN  P L ++   K W+  +       +      +      
Sbjct: 189 EAQRFIDAIYQMFHTSVPMLNLPPDLFRLFRTKTWKDHVAAWDVIFSKADIYTQNFYWEL 248

Query: 266 EEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEIVSLCSEFLNAGTDTTSTALQWIM 325
            ++     +      Y   L  L       K+S E+I +  +E L  G DTTS  LQW +
Sbjct: 249 RQKGSVHHD------YRGILYRLL---GDSKMSFEDIKANVTEMLAGGVDTTSMTLQWHL 299

Query: 326 ANLVKHPHVQETVYTEIRGVVGENEE 351
             + ++  VQ+ +  E+     + + 
Sbjct: 300 YEMARNLKVQDMLRAEVLAARHQAQG 325
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A* Length = 482 Back     alignment and structure
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A* Length = 491 Back     alignment and structure
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A* Length = 494 Back     alignment and structure
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens} Length = 495 Back     alignment and structure
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus} Length = 496 Back     alignment and structure
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens} Length = 507 Back     alignment and structure
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A* Length = 481 Back     alignment and structure
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A* Length = 498 Back     alignment and structure
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A* Length = 479 Back     alignment and structure
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* Length = 503 Back     alignment and structure
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A* Length = 476 Back     alignment and structure
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A* Length = 476 Back     alignment and structure
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A* Length = 475 Back     alignment and structure
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A* Length = 476 Back     alignment and structure
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A* Length = 477 Back     alignment and structure
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A* Length = 455 Back     alignment and structure
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A* Length = 444 Back     alignment and structure
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A* Length = 467 Back     alignment and structure
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ... Length = 470 Back     alignment and structure
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A* Length = 415 Back     alignment and structure
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A* Length = 417 Back     alignment and structure
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* Length = 456 Back     alignment and structure
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A* Length = 450 Back     alignment and structure
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A* Length = 485 Back     alignment and structure
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A* Length = 389 Back     alignment and structure
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A* Length = 495 Back     alignment and structure
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A* Length = 473 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase, metal-binding, oxidoreductase, hypothetical protein; HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB: 2uvn_A* 2whf_A* 2wh8_A* 2wgy_A* Length = 414 Back     alignment and structure
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein, oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB: 3nc5_A* 3nc6_A* 3nc7_A* Length = 441 Back     alignment and structure
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} PDB: 3lxi_A* Length = 421 Back     alignment and structure
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron, metal-binding, oxidoreductase, substrate-soaking, cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB: 1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A* 2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A* 1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ... Length = 415 Back     alignment and structure
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent, mono-oxygenases, oxidoreductase; HET: HEM; 2.00A {Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A* Length = 417 Back     alignment and structure
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A {Novosphingobium aromaticivorans} PDB: 3ofu_A* Length = 396 Back     alignment and structure
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM EDO; 1.37A {Citrobacter braakii} PDB: 1t2b_A* 3bdz_A* 3be0_A* Length = 398 Back     alignment and structure
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A {Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A* 4dnz_A* Length = 412 Back     alignment and structure
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase, metal-binding, AN biosynthesis, TIE-ROD mechanism of action; HET: HEM; 1.59A {Saccharopolyspora erythraea} PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A* Length = 411 Back     alignment and structure
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX, bioremediation, electron transport; HET: HEM; 1.49A {Rhodococcus} PDB: 2wiv_A* Length = 394 Back     alignment and structure
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus} PDB: 2rfc_A* Length = 343 Back     alignment and structure
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM; 1.60A {Mycobacterium tuberculosis} Length = 398 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query413
3swz_A 494 Steroid 17-alpha-hydroxylase/17,20 lyase; cytochro 100.0
3k9v_A482 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitocho 100.0
3s79_A503 Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD 100.0
3pm0_A 507 Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase 100.0
3tbg_A479 Cytochrome P450 2D6; monooxygenase, thioridazine, 100.0
3czh_A481 Cytochrome P450 2R1; vitamin D, vitamin S 25-hydro 100.0
3e6i_A476 CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, mono 100.0
2hi4_A 495 Cytochrome P450 1A2; CYP1A2, monooxygenase, drug m 100.0
3qz1_A 496 Steroid 21-hydroxylase; P450 monooxygenase, oxidor 100.0
1r9o_A477 Cytochrome P450 2C9; monooxygenase, drug metaboliz 100.0
1po5_A476 Cytochrome P450 2B4; oxidoreductase, membrane prot 100.0
2fdv_A476 Cytochrome P450 2A6; CYP2A6, monooxygenase, drug m 100.0
3nxu_A 485 Cytochrome P450 3A4; alpha beta protein, cytochrom 100.0
3n9y_A 487 Cholesterol SIDE-chain cleavage enzyme; cytochrome 100.0
2ij2_A 470 Cytochrome P450 BM3; monoxygenase, heme binding pr 100.0
3ld6_A461 Lanosterol 14-alpha demethylase; cytochrome P450, 100.0
3gw9_A450 Sterol 14alpha-demethylase; CYP51, cytochrome P450 100.0
2cib_A455 Cytochrome P450 51; heme, heme lipid synthesis, me 100.0
2ve3_A444 Putative cytochrome P450 120; oxidoreductase, mono 100.0
3i3k_A461 Lanosterol 14-alpha demethylase; cytochrome P450, 100.0
3dbg_A467 Putative cytochrome P450; cytochrome P450 oxidored 100.0
3mdm_A 456 Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, th 100.0
3v8d_A 491 Cholesterol 7-alpha-monooxygenase; cytochrome, oxi 100.0
3dax_A 491 Cytochrome P450 7A1; cholesterol, cholesterol 7-al 100.0
2cd8_A436 Cytochrome P450 monooxygenase; oxidoreductase, PIK 100.0
1jfb_A404 Nitric-oxide reductase cytochrome P450 55A1; cytoc 100.0
3b6h_A 498 Prostacyclin synthase; enzyme-inhibitor complex, C 100.0
3dsk_A495 Cytochrome P450 74A, chloroplast; P450 fold, fatty 100.0
1izo_A417 P450bsbeta, cytochrome P450 152A1; heme protein, p 100.0
1ued_A406 P450 OXYC, P450 monooxygenase; cytochrome P450 van 100.0
1n97_A389 CYP175A1; electron transport; HET: SRT HEM; 1.80A 100.0
1cpt_A428 Cytochrome P450-TERP; oxidoreductase(oxygenase); H 100.0
3awm_A415 Fatty acid alpha-hydroxylase; cytochrome P450, per 100.0
3b98_A 475 Prostaglandin I2 synthase; prostacyclin synthase, 100.0
3dan_A473 Cytochrome P450 74A2; AOS heme cytochrome P450 str 100.0
2zbx_A412 Cytochrome P450-SU1; beta prism, heme, iron, metal 100.0
3oo3_A384 OXY protein; cytochrome P450, monooxygenase, PCD-t 100.0
2jjn_A411 Cytochrome P450 113A1; oxidoreductase, iron, heme, 100.0
2zwu_A415 Camphor 5-monooxygenase; P450CAM, camphor-hydroxyl 100.0
3aba_A403 Cytochrome P450; oxidoreductase, heme, monooxygena 100.0
1s1f_A406 Putative cytochrome P450; cytochrome P450 oxidored 100.0
2wm5_A435 CYP124, putative cytochrome P450 124; metal-bindin 100.0
2y5n_A417 MYCG, P-450-like protein; oxidoreductase, mycinami 100.0
3a4g_A411 Vitamin D hydroxylase; cytochrome P450, hemoprotei 100.0
1q5d_A419 P450 epoxidase; cytochrome P450, epothilone, oxydo 100.0
2xkr_A398 CYP142, putative cytochrome P450 142; oxidoreducta 100.0
3tyw_A417 Putative cytochrome P450; P450 monooxygenase, oxid 100.0
2z3t_A425 Cytochrome P450; monoxygenase, oxydoreductase, hem 100.0
3ivy_A433 Cytochrome P450 CYP125; cholesterol, monooxygenase 100.0
1odo_A408 Putative cytochrome P450 154A1; P450 monooxygenase 100.0
2z36_A413 MOXA, cytochrome P450 type compactin 3'',4''- hydr 100.0
3ejb_B404 Biotin biosynthesis cytochrome P450-like enzyme; p 100.0
3abb_A408 CYP105D6, cytochrome P450 hydroxylase; oxidoreduct 100.0
3tkt_A450 Cytochrome P450; aromatic hydrocarbon binding of P 100.0
1z8o_A404 6-deoxyerythronolide B hydroxylase; heme, CYP, ery 100.0
2uuq_A414 CYP130, cytochrome P450 130; iron, heme, monooxyge 100.0
4fb2_A398 P450CIN; heme, monooxygenase, cindoxin, oxidoreduc 100.0
1gwi_A411 CYP154C1, cytochrome P450 154C1; oxidoreductase, m 100.0
2xbk_A404 PIMD protein; epoxidation, oxidoreductase; HET: HE 100.0
2dkk_A411 Cytochrome P450; CYP158A1, INHI oxidoreductase; HE 100.0
3buj_A397 CALO2; heme, iron, metal-binding, monooxygenase, o 100.0
3r9b_A418 Cytochrome P450 164A2; monooxygenase, oxidoreducta 100.0
1lfk_A398 OXYB, P450 monooxygenase; oxidative phenol couplin 100.0
3lxh_A421 Cytochrome P450; heme, iron, metal-binding, monoox 100.0
3nc3_A441 Cytochrome P450 CYPX; cytochrome P450 oxidase, HAE 100.0
3mgx_A415 Putative P450 monooxygenase; cytochrome P450 oxida 100.0
1n40_A396 P450 MT2, cytochrome P450 121; heme binding, oxyge 100.0
3oft_A396 Cytochrome P450, CYP101C1; oxidoreductase; HET: HE 100.0
3rwl_A426 Cytochrome P450 alkane hydroxylase 1 CYP153A7; P45 99.97
2rfb_A343 Cytochrome P450; heme, iron, metal-binding, monoox 99.97
3p3o_A416 Cytochrome P450; monooxygenase, oxidoreductase; HE 99.97
1io7_A368 Cytochrome P450 CYP119; thermophilic, cytochromo P 99.97
2wiy_A394 XPLA-heme, cytochrome P450-like protein XPLA; CYT- 99.97
3b4x_A367 367AA long hypothetical cytochrome P450; HEM prote 99.97
4dnj_A412 Putative cytochrome P450; oxidoreductase; HET: HEM 99.95
4dxy_A417 Cytochrome P450, CYP101D2; cytochrome P450 mutant, 99.9
2yjn_B381 Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; 99.77
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A* Back     alignment and structure
Probab=100.00  E-value=9e-53  Score=420.27  Aligned_cols=365  Identities=21%  Similarity=0.347  Sum_probs=273.3

Q ss_pred             CCCCCCCCCCCCcccccccchhhhhccCCchHHHHHHHhhcCCeEEEEcCCccEEEEeChHHHHHHHHhcCcccccCCCC
Q 040489           27 PKYKTNLPPGPFNLPVIGNLQWLLKSFSEIEPILRNLHSKLGPVVTLFIGPRPAIFIADRSLAHKALVQNGAIFADRPRP  106 (413)
Q Consensus        27 ~~~~~~~~PgP~~~pl~G~l~~~~~~~~~~~~~~~~~~~kyG~i~~~~~g~~~~v~i~dpe~i~~il~~~~~~f~~r~~~  106 (413)
                      +++..++||||+++|++||++++.. .+.++..+.+|+++||+||++++|+.++|+++||++++++|.+++..|.+|+..
T Consensus         3 k~~~~~~PPgP~~lPliGnl~~l~~-~~~~~~~~~~~~~kYG~i~~~~~g~~~~vvv~~p~~~k~il~~~~~~f~~rp~~   81 (494)
T 3swz_A            3 KKTGAKYPKSLLSLPLVGSLPFLPR-HGHMHNNFFKLQKKYGPIYSVRMGTKTTVIVGHHQLAKEVLIKKGKDFSGRPQM   81 (494)
T ss_dssp             ---------CCBCCCEEEEESSCTT-SSCHHHHHHHTHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTBBCCCC
T ss_pred             CCCCCCCCCCCCCCCeEcchHHhCC-CCchhHHHHHHHHHcCCEEEEEeCCCCEEEECCHHHHHHHHHhCcHhhCCCCCc
Confidence            4445578999999999999998753 235788999999999999999999999999999999999999888889888754


Q ss_pred             CCCcccccCCCcceEeccCChhHHHHHHHHhhhhcCH--HHHhHHHHHHHHHHHHHHHHHHhhccCCCCCcccchHHHHH
Q 040489          107 LPTSKIVSSNQHNISSASYGTTWRLFRRNLSAEILHP--SRVKSYKHARKWVLEILLNHLKSESKNGDRPVPVRVLDHFQ  184 (413)
Q Consensus       107 ~~~~~~~~~~~~~i~~~~~g~~w~~~Rk~~~~~~~s~--~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~vd~~~~~~  184 (413)
                      . ....++.++.++.+..+|+.|+++||.+. +.|+.  ..++.+.+.+.++++.+++.|...  .+   .++|+.+.+.
T Consensus        82 ~-~~~~~~~~~~gl~~~~~g~~wr~~Rr~~~-~~f~~~~~~~~~~~~~i~~~~~~l~~~l~~~--~~---~~vd~~~~~~  154 (494)
T 3swz_A           82 A-TLDIASNNRKGIAFADSGAHWQLHRRLAM-ATFALFKDGDQKLEKIICQEISTLCDMLATH--NG---QSIDISFPVF  154 (494)
T ss_dssp             H-HHHHHTTTTCSSSSSCSSHHHHHHHHHHH-HHTTTTSSSTTCHHHHHHHHHHHHHHHHHHT--TT---EEECCHHHHH
T ss_pred             H-HHHHhccCCCCeEeCCCCHHHHHHHHHHH-HHHHHhcchHHHHHHHHHHHHHHHHHHHHHc--CC---CcccHHHHHH
Confidence            2 22334433345655567999999999875 66764  457778999999999999988753  23   6899999999


Q ss_pred             HHHHHHHHHHHhcCCCCh--HHHHHHHHHHHHHHHHhcCCcccccccccchhhchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 040489          185 YAMFCLLVLMCFGDKLDE--SQIKKIENVQRTQLLAFGNFNILNFWPRLSKIVFVKKWEQFLQMRRDQENVLVPLIRARK  262 (413)
Q Consensus       185 ~~~~~vi~~~~fG~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~r~  262 (413)
                      .+++|+|+.++||.+++.  +....+......+........+.+++|++..++ ....++..+..+...+++..++++++
T Consensus       155 ~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~p-~~~~~~~~~~~~~~~~~~~~~i~~~~  233 (494)
T 3swz_A          155 VAVTNVISLICFNTSYKNGDPELNVIQNYNEGIIDNLSKDSLVDLVPWLKIFP-NKTLEKLKSHVKIRNDLLNKILENYK  233 (494)
T ss_dssp             HHHHHHHHHHHHSCCCCTTCTHHHHHHHHHHHHHHHHCSSSSCCSSCGGGTSC-CSHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHcCCcCCCCCHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcC-cHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999998843  222333333333333333344567778775433 22334445555666677777777665


Q ss_pred             HhhhhhhhhhhhhhhhhhHHHHHHhccCCc---------ccCCCCHHHHHHHHHHHhhcccccHHHHHHHHHHHHhhChH
Q 040489          263 KMKEEESLSIKEREYVLSYVDTLLDLQLPE---------EKRKLSEEEIVSLCSEFLNAGTDTTSTALQWIMANLVKHPH  333 (413)
Q Consensus       263 ~~~~~~~~~~~~~~~~~~~ld~ll~~~~~~---------~~~~lt~~ei~~~~~~~l~AG~dTTa~tl~w~~~~La~~P~  333 (413)
                      +...        .+...|+++.|++...+.         ++..+++++|.+++.++++||+||||++++|++++|++||+
T Consensus       234 ~~~~--------~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~  305 (494)
T 3swz_A          234 EKFR--------SDSITNMLDTLMQAKMNSDNGNAGPDQDSELLSDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHNPQ  305 (494)
T ss_dssp             TTCC--------TTCCCSHHHHHHHHHHTSCCC----CCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH
T ss_pred             Hhhc--------ccchhHHHHHHHHHHHhhhcccccccccccccCHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHhCHH
Confidence            4321        112348999998753210         12358999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhhcCCCC---CCCCCChhHHHhhhccccccCCCCCCCcchhhhhhhccccccccccccccccceeeeee
Q 040489          334 VQETVYTEIRGVVGENEE---GPKYRVPLFLFICIPDLRIHMHLSLDDPECVRAIWYSEKEDKESFWNKSTVVEATYINI  410 (413)
Q Consensus       334 vq~Kl~eEi~~v~g~~~~---~~~~~lpyl~avikEtlRl~pp~~~~~pr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  410 (413)
                      +|+|+++||++++|.+..   +++.+||||+|||+|+||+|||+|+.+||++.+    +..-.+++.++++.|..+.|++
T Consensus       306 ~q~kl~~Ei~~v~~~~~~~~~~~~~~lpyl~a~i~E~lRl~p~~~~~~~r~~~~----d~~~~g~~ip~Gt~v~~~~~~~  381 (494)
T 3swz_A          306 VKKKLYEEIDQNVGFSRTPTISDRNRLLLLEATIREVLRLRPVAPMLIPHKANV----DSSIGEFAVDKGTEVIINLWAL  381 (494)
T ss_dssp             HHHHHHHHHHHHTCSSSCCCGGGGGTCHHHHHHHHHHHHHSCSSTTCSCEECSS----SEEETTEEECTTCEEEECHHHH
T ss_pred             HHHHHHHHHHHhcCCCCCCCHHHHhcCHHHHHHHHHHHHhcCCcccccceecCC----CceECCEEeCCCCEEEEehHHh
Confidence            999999999999986543   889999999999999999999999988887753    2233578899999999998887


Q ss_pred             ec
Q 040489          411 VR  412 (413)
Q Consensus       411 ~~  412 (413)
                      -|
T Consensus       382 ~~  383 (494)
T 3swz_A          382 HH  383 (494)
T ss_dssp             HH
T ss_pred             hC
Confidence            65
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A* Back     alignment and structure
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* 4gl5_A* 4gl7_A* Back     alignment and structure
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens} Back     alignment and structure
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A* Back     alignment and structure
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A* Back     alignment and structure
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A* Back     alignment and structure
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens} Back     alignment and structure
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus} Back     alignment and structure
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A* Back     alignment and structure
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A* Back     alignment and structure
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A* Back     alignment and structure
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A* Back     alignment and structure
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A* Back     alignment and structure
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ... Back     alignment and structure
>3ld6_A Lanosterol 14-alpha demethylase; cytochrome P450, ketoconazole, S genomics, structural genomics consortium, SGC; HET: HEM KKK BCD; 2.80A {Homo sapiens} PDB: 3juv_A* 3jus_A* Back     alignment and structure
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3tik_A* 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A* Back     alignment and structure
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A* Back     alignment and structure
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A* Back     alignment and structure
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A* Back     alignment and structure
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* 4enh_A* 4fia_A* Back     alignment and structure
>3v8d_A Cholesterol 7-alpha-monooxygenase; cytochrome, oxidoreductase; HET: HEM 0GV; 1.90A {Homo sapiens} PDB: 3sn5_A* 3dax_A* Back     alignment and structure
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A* Back     alignment and structure
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide monooxygenase, antibiotic biosynthesis, heme, iron, metal-binding; HET: HEM PXI; 1.7A {Streptomyces venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A* 2vz7_A* 2vsj_A* 2wi9_A* 2whw_A* Back     alignment and structure
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR, atomic resolutio structural genomics/proteomics initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum} SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A* 1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A* 1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A* Back     alignment and structure
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A* Back     alignment and structure
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A* Back     alignment and structure
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A* Back     alignment and structure
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A {Amycolatopsis orientalis} SCOP: a.104.1.1 Back     alignment and structure
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A* Back     alignment and structure
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A {Pseudomonas SP} SCOP: a.104.1.1 Back     alignment and structure
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A* Back     alignment and structure
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A* Back     alignment and structure
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A* Back     alignment and structure
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.50A {Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A* 3cv9_A* Back     alignment and structure
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes teichomyceticus} SCOP: a.104.1.0 PDB: 3o1a_A* Back     alignment and structure
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase, metal-binding, AN biosynthesis, TIE-ROD mechanism of action; HET: HEM; 1.59A {Saccharopolyspora erythraea} PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A* Back     alignment and structure
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron, metal-binding, oxidoreductase, substrate-soaking, cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB: 1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A* 2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A* 1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ... Back     alignment and structure
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding, oxidoreductase-antibiotic complex; HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB: 3e5j_A* 3e5k_A* 3e5l_A* Back     alignment and structure
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2, anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A {Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A* 2d0e_A* 1t93_A* 2d09_A* 3tzo_A* Back     alignment and structure
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding, oxidoreductase, omega-hydroxylation, iron, heme, fatty acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium tuberculosis} PDB: 2wm4_A* Back     alignment and structure
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis; HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB: 2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A* Back     alignment and structure
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox oxidoreductase; HET: HEM; 1.75A {Pseudonocardia autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A* Back     alignment and structure
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A {Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A* 1pkf_A* Back     alignment and structure
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM; 1.60A {Mycobacterium tuberculosis} Back     alignment and structure
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET: HEM; 2.90A {Streptomyces coelicolor} PDB: 4fxb_A* Back     alignment and structure
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB: 2z3u_A* 3a1l_A* Back     alignment and structure
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron, metal-binding, oxidoreductase; HET: HEM; 1.35A {Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A* 3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A* Back     alignment and structure
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase; HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP: a.104.1.1 Back     alignment and structure
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105, oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea recticatena} Back     alignment and structure
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus subtilis} SCOP: a.104.1.0 PDB: 3ejd_B* 3eje_B* Back     alignment and structure
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding; HET: HEM; 2.30A {Streptomyces avermitilis} Back     alignment and structure
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} Back     alignment and structure
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin, oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A* 1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A* Back     alignment and structure
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase, metal-binding, oxidoreductase, hypothetical protein; HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB: 2uvn_A* 2whf_A* 2wh8_A* 2wgy_A* Back     alignment and structure
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM EDO; 1.37A {Citrobacter braakii} PDB: 4fmx_A* 4fyz_A* 1t2b_A* 3bdz_A* 3be0_A* Back     alignment and structure
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide antibiotics, 12- and 14- carbon macrolactone monooxygenase, heme; HET: HEM; 1.92A {Streptomyces coelicolor} SCOP: a.104.1.1 Back     alignment and structure
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A {Streptomyces natalensis} PDB: 2x9p_A* Back     alignment and structure
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A {Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A* Back     alignment and structure
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta binding protein; HET: HEM; 2.47A {Micromonospora echinospora} Back     alignment and structure
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12; 1.89A {Mycobacterium smegmatis} PDB: 3r9c_A* Back     alignment and structure
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450 vancomycin, oxidoreductase; HET: HEM; 1.70A {Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A* 1lgf_A* Back     alignment and structure
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} SCOP: a.104.1.0 PDB: 3lxi_A* Back     alignment and structure
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein, oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB: 3nc5_A* 3nc6_A* 3nc7_A* Back     alignment and structure
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein, vancomycin biosynthes carrier protein, oxidoreductase; HET: HEM; 2.10A {Amycolatopsis balhimycina} Back     alignment and structure
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450 fold, structural genomics, PSI, protein structure initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A* 3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A* Back     alignment and structure
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A {Novosphingobium aromaticivorans} PDB: 3ofu_A* Back     alignment and structure
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase, oxidoreductase; HET: HEM; 2.00A {Sphingopyxis macrogoltabida} Back     alignment and structure
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus} PDB: 2rfc_A* Back     alignment and structure
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A {Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A* Back     alignment and structure
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: HEM; 1.50A {Sulfolobus solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A* 1io9_A* 1io8_A* Back     alignment and structure
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX, bioremediation, electron transport; HET: HEM; 1.49A {Rhodococcus} PDB: 2wiv_A* Back     alignment and structure
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.94A {Sulfolobus tokodaii} PDB: 1ue8_A* Back     alignment and structure
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A {Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A* 4dnz_A* Back     alignment and structure
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent, mono-oxygenases, oxidoreductase; HET: HEM; 2.00A {Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A* Back     alignment and structure
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 413
d1po5a_465 a.104.1.1 (A:) Mammalian cytochrome p450 2b4 {Rabb 1e-35
d3czha1463 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2 2e-33
d1tqna_472 a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Huma 3e-27
d1r9oa_467 a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Huma 2e-26
d2ij2a1453 a.104.1.1 (A:3-455) Cytochrome P450 bm-3 {Bacillus 1e-21
d2ciba1445 a.104.1.1 (A:5-449) Cytochrome p450 14 alpha-stero 1e-15
d1odoa_401 a.104.1.1 (A:) Cyp154a1 monooxygenase {Streptomyce 2e-06
d1n97a_385 a.104.1.1 (A:) Cyp175a1 {Thermus thermophilus [Tax 2e-05
>d1po5a_ a.104.1.1 (A:) Mammalian cytochrome p450 2b4 {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 465 Back     information, alignment and structure

class: All alpha proteins
fold: Cytochrome P450
superfamily: Cytochrome P450
family: Cytochrome P450
domain: Mammalian cytochrome p450 2b4
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score =  134 bits (337), Expect = 1e-35
 Identities = 74/382 (19%), Positives = 133/382 (34%), Gaps = 16/382 (4%)

Query: 33  LPPGPFNLPVIGNLQWLLKSFSEIEPILRNLHSKLGPVVTLFIGPRPAIFIADRSLAHKA 92
           LPPGP  LPV+GNL  + +    +      L  K G V T+++G RP + +       +A
Sbjct: 3   LPPGPSPLPVLGNLLQMDRK--GLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREA 60

Query: 93  LVQNGAIFADRPRPLPTSKIVSSNQHNISSASYGTTWRLFRRNLSAEILHPSRVKSYKHA 152
           LV     F+ R   +     +      I   + G  WR  RR   A +      K     
Sbjct: 61  LVDQAEAFSGRG-KIAVVDPIFQGYGVIF--ANGERWRALRRFSLATMRDFGMGKRSVEE 117

Query: 153 RKWVLEILLNHLKSESKNGDRPVPVRVLDHFQYAMFCLLVLMCFGDKLDESQIKKIENVQ 212
           R       L     +SK       +     F      ++  + FG + D      +  + 
Sbjct: 118 RIQEEARCLVEELRKSKGA----LLDNTLLFHSITSNIICSIVFGKRFDYKDPVFLRLLD 173

Query: 213 RTQLLAFGNFNILNFWPRLSKIVFVKKWEQFLQMRRDQENVLVPLIRARKKMKEE--ESL 270
               L F +F++++ +      +F    + F    R     L  +     +  E+   +L
Sbjct: 174 ----LFFQSFSLISSFSSQVFELFSGFLKHFPGTHRQIYRNLQEINTFIGQSVEKHRATL 229

Query: 271 SIKEREYVLSYVDTLLDLQLPEEKRKLSEEEIVSLCSEFLNAGTDTTSTALQWIMANLVK 330
                   +      ++    +   +   + ++        AGT+TTST L++    ++K
Sbjct: 230 DPSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLK 289

Query: 331 HPHVQETVYTEIRGVVGENEEGPKYRVPLFLFICIPDLRIHMHLSLDDPECVRAIWYSEK 390
           +PHV E V  EI  V+G +   P       +      +     L    P  V      + 
Sbjct: 290 YPHVTERVQKEIEQVIGSHRP-PALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDT 348

Query: 391 EDKESFWNKSTVVEATYINIVR 412
           + +     K+T V     + + 
Sbjct: 349 QFRGYVIPKNTEVFPVLSSALH 370
>d3czha1 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2R1 {Human (Homo sapiens) [TaxId: 9606]} Length = 463 Back     information, alignment and structure
>d1tqna_ a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Human (Homo sapiens) [TaxId: 9606]} Length = 472 Back     information, alignment and structure
>d1r9oa_ a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Human (Homo sapiens) [TaxId: 9606]} Length = 467 Back     information, alignment and structure
>d2ij2a1 a.104.1.1 (A:3-455) Cytochrome P450 bm-3 {Bacillus megaterium [TaxId: 1404]} Length = 453 Back     information, alignment and structure
>d2ciba1 a.104.1.1 (A:5-449) Cytochrome p450 14 alpha-sterol demethylase (cyp51) {Mycobacterium tuberculosis [TaxId: 1773]} Length = 445 Back     information, alignment and structure
>d1odoa_ a.104.1.1 (A:) Cyp154a1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]} Length = 401 Back     information, alignment and structure
>d1n97a_ a.104.1.1 (A:) Cyp175a1 {Thermus thermophilus [TaxId: 274]} Length = 385 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query413
d2ij2a1453 Cytochrome P450 bm-3 {Bacillus megaterium [TaxId: 100.0
d2ciba1445 Cytochrome p450 14 alpha-sterol demethylase (cyp51 100.0
d1r9oa_467 Mammalian cytochrome p450 2c9 {Human (Homo sapiens 100.0
d1tqna_472 Mammalian cytochrome P450 3a4 {Human (Homo sapiens 100.0
d3czha1463 Vitamin D 25-hydroxylase Cyp2R1 {Human (Homo sapie 100.0
d1po5a_465 Mammalian cytochrome p450 2b4 {Rabbit (Oryctolagus 100.0
d1izoa_411 Cytochrome p450 152a1 (Bs-beta) {Bacillus subtilis 100.0
d1n97a_385 Cyp175a1 {Thermus thermophilus [TaxId: 274]} 100.0
d1gwia_403 Cyp154c1 monooxygenase {Streptomyces coelicolor [T 99.95
d1jfba_399 Cytochrome P450-NOR, nitric reductase {Fungus (Fus 99.94
d1ueda_403 p450 monoxygenase OxyC {Amycolatopsis orientalis [ 99.94
d1z8oa1402 Cytochrome P450-ERYF {Saccharopolyspora erythraea 99.93
d1odoa_401 Cyp154a1 monooxygenase {Streptomyces coelicolor [T 99.93
d1n40a_395 Cyp121 monooxygenase (P450 Mt2) {Mycobacterium tub 99.92
d1q5da_401 Cytochrome P450epok {Sorangium cellulosum [TaxId: 99.9
d1re9a_404 Cytochrome P450-CAM {Pseudomonas putida [TaxId: 30 99.9
d1cpta_428 Cytochrome P450-TERP {Pseudomonas sp. [TaxId: 306] 99.9
d1s1fa_399 Cyp158a2 {Streptomyces coelicolor [TaxId: 1902]} 99.87
d1lfka_394 p450 monoxygenase OxyB {Amycolatopsis orientalis [ 99.81
d1ue8a_367 Cyp119 {Archaeon Sulfolobus tokodaii [TaxId: 11195 99.79
d1io7a_366 Cyp119 {Archaeon Sulfolobus solfataricus [TaxId: 2 99.75
>d2ij2a1 a.104.1.1 (A:3-455) Cytochrome P450 bm-3 {Bacillus megaterium [TaxId: 1404]} Back     information, alignment and structure
class: All alpha proteins
fold: Cytochrome P450
superfamily: Cytochrome P450
family: Cytochrome P450
domain: Cytochrome P450 bm-3
species: Bacillus megaterium [TaxId: 1404]

Probab=100.00  E-value=1.1e-48  Score=384.10  Aligned_cols=351  Identities=16%  Similarity=0.120  Sum_probs=262.5

Q ss_pred             CCCCCCCcccccccchhhhhccCCchHHHHHHHhhcCCeEEEEcCCccEEEEeChHHHHHHHHhcCcccccCCCCCCCcc
Q 040489           32 NLPPGPFNLPVIGNLQWLLKSFSEIEPILRNLHSKLGPVVTLFIGPRPAIFIADRSLAHKALVQNGAIFADRPRPLPTSK  111 (413)
Q Consensus        32 ~~~PgP~~~pl~G~l~~~~~~~~~~~~~~~~~~~kyG~i~~~~~g~~~~v~i~dpe~i~~il~~~~~~f~~r~~~~~~~~  111 (413)
                      +.+|||++||++||++.+.  .+++++++.++++||||||++++|+.++|+++||+++++++.++...+..+........
T Consensus         1 r~iPGP~~~p~lG~l~~l~--~~~~~~~~~~~~~kyG~if~~~~~~~~~vvl~~~~~i~~v~~~~~~~~~~~~~~~~~~~   78 (453)
T d2ij2a1           1 KEMPQPKTFGELKNLPLLN--TDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDESRFDKNLSQALKFVRD   78 (453)
T ss_dssp             CCCCCCCCCGGGTTGGGGC--SSCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHTCTTTEEECCCHHHHHHHH
T ss_pred             CCCccCCCcchhhCHHHhC--CCCHHHHHHHHHHHhCCEEEEEeCCceEEEECCHHHHHHHHhcCCcccccccHhHHHHH
Confidence            3589999999999998874  35689999999999999999999999999999999999999665544433221111122


Q ss_pred             cccCCCcceEeccCChhHHHHHHHHhhhhcCHHHHhHHHHHHHHHHHHHHHHHHhhccCCCCCcccchHHHHHHHHHHHH
Q 040489          112 IVSSNQHNISSASYGTTWRLFRRNLSAEILHPSRVKSYKHARKWVLEILLNHLKSESKNGDRPVPVRVLDHFQYAMFCLL  191 (413)
Q Consensus       112 ~~~~~~~~i~~~~~g~~w~~~Rk~~~~~~~s~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~vd~~~~~~~~~~~vi  191 (413)
                      +.+.  +.+....+|+.|+++||.+. +.|++..+++|.+.+.++++.+++.|.+... +   ..+|+.+++..+++|++
T Consensus        79 ~~g~--~~~~~~~~g~~wk~~Rk~l~-~~fs~~~l~~~~~~i~~~~~~li~~l~~~~~-~---~~idl~~~~~~~~~~~i  151 (453)
T d2ij2a1          79 FAGD--GLFTSWTHEKNWKKAHNILL-PSFSQQAMKGYHAMMVDIAVQLVQKWERLNA-D---EHIEVPEDMTRLTLDTI  151 (453)
T ss_dssp             HHTT--SGGGSCTTSHHHHHHHHHHG-GGGSTTTHHHHHHHHHHHHHHHHHHHHTCCT-T---CCEEHHHHHHHHHHHHH
T ss_pred             hcCC--cEEecCCChHHHHHHHHHHH-HHhhhhhhhhhhhhHHHHHHHHHHHhhhcCC-C---CccchHHHHHHHhhhcc
Confidence            2322  12222358999999999875 7899999999999999999999999976432 3   68999999999999999


Q ss_pred             HHHHhcCCCCh-------HHHHHHHHHHHHHHHHhcCCcccccccccchhhchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 040489          192 VLMCFGDKLDE-------SQIKKIENVQRTQLLAFGNFNILNFWPRLSKIVFVKKWEQFLQMRRDQENVLVPLIRARKKM  264 (413)
Q Consensus       192 ~~~~fG~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~r~~~  264 (413)
                      ++++||.+++.       +....+.......+.   .  +..+.|++..  +....+...+..+.+.+++.++++++++.
T Consensus       152 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~r~~~  224 (453)
T d2ij2a1         152 GLCGFNYRFNSFYRDQPHPFITSMVRALDEAMN---K--LQRANPDDPA--YDENKRQFQEDIKVMNDLVDKIIADRKAS  224 (453)
T ss_dssp             HHHHHSCCCCGGGCSSCCHHHHHHHHHHHHHHH---T--C---CTTSGG--GHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhcccccccchhhhccchHHHHhhhhccchhhh---h--hhhccccccc--chhhHHHHHHHHHHHHHHHHHHHhhhccc
Confidence            99999988742       112222222222211   1  1112222211  22334455556667777787777776543


Q ss_pred             hhhhhhhhhhhhhhhhHHHHHHhccCCcccCCCCHHHHHHHHHHHhhcccccHHHHHHHHHHHHhhChHHHHHHHHHHHh
Q 040489          265 KEEESLSIKEREYVLSYVDTLLDLQLPEEKRKLSEEEIVSLCSEFLNAGTDTTSTALQWIMANLVKHPHVQETVYTEIRG  344 (413)
Q Consensus       265 ~~~~~~~~~~~~~~~~~ld~ll~~~~~~~~~~lt~~ei~~~~~~~l~AG~dTTa~tl~w~~~~La~~P~vq~Kl~eEi~~  344 (413)
                      .          +...|+++.+++..+++.+..++++++..+++++++||+|||+++++|+++.|++||++|+++++|+++
T Consensus       225 ~----------~~~~d~l~~ll~~~~~~~~~~ls~~ei~~~~~~~l~ag~~tta~~l~~~l~~L~~~p~~~~~~~~e~~~  294 (453)
T d2ij2a1         225 G----------EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAAR  294 (453)
T ss_dssp             C----------CCCSSHHHHHHHCCCTTTCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred             c----------ccccchhhhhhhhcccccCcchhhhHHHhhhccccccccccchhhhhcchhhhhcccccchhhhhhhhh
Confidence            2          122389999998766555678999999999999999999999999999999999999999999999999


Q ss_pred             hhcCCCC--CCCCCChhHHHhhhccccccCCCCCCCcchhhhhhhccccccccccccccccceeeeeeec
Q 040489          345 VVGENEE--GPKYRVPLFLFICIPDLRIHMHLSLDDPECVRAIWYSEKEDKESFWNKSTVVEATYINIVR  412 (413)
Q Consensus       345 v~g~~~~--~~~~~lpyl~avikEtlRl~pp~~~~~pr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  412 (413)
                      +.+....  +++.+||||+||++||||+||+++...++++.+..    ...+...+++++|..+..++-|
T Consensus       295 ~~~~~~~~~~~l~~~p~L~a~i~E~lR~~p~~~~~~r~~~~~~~----~~~~~~ip~g~~v~~~~~~~~~  360 (453)
T d2ij2a1         295 VLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTV----LGGEYPLEKGDELMVLIPQLHR  360 (453)
T ss_dssp             HCCSSSCCHHHHHTCHHHHHHHHHHHHHSCSSCEEEEEESSCEE----ETTTEEECTTCEEEEEHHHHTT
T ss_pred             hhccccCChhhhhcCCcchhhhhhhhcccccccccccccccccc----cCCcceeecccccccchhhccc
Confidence            9886543  78899999999999999999999998888776522    2345777888888776655443
>d2ciba1 a.104.1.1 (A:5-449) Cytochrome p450 14 alpha-sterol demethylase (cyp51) {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1r9oa_ a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1tqna_ a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d3czha1 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2R1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1po5a_ a.104.1.1 (A:) Mammalian cytochrome p450 2b4 {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d1izoa_ a.104.1.1 (A:) Cytochrome p450 152a1 (Bs-beta) {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1n97a_ a.104.1.1 (A:) Cyp175a1 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1gwia_ a.104.1.1 (A:) Cyp154c1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1jfba_ a.104.1.1 (A:) Cytochrome P450-NOR, nitric reductase {Fungus (Fusarium oxysporum) [TaxId: 5507]} Back     information, alignment and structure
>d1ueda_ a.104.1.1 (A:) p450 monoxygenase OxyC {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure
>d1z8oa1 a.104.1.1 (A:3-404) Cytochrome P450-ERYF {Saccharopolyspora erythraea [TaxId: 1836]} Back     information, alignment and structure
>d1odoa_ a.104.1.1 (A:) Cyp154a1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1n40a_ a.104.1.1 (A:) Cyp121 monooxygenase (P450 Mt2) {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1q5da_ a.104.1.1 (A:) Cytochrome P450epok {Sorangium cellulosum [TaxId: 56]} Back     information, alignment and structure
>d1re9a_ a.104.1.1 (A:) Cytochrome P450-CAM {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1cpta_ a.104.1.1 (A:) Cytochrome P450-TERP {Pseudomonas sp. [TaxId: 306]} Back     information, alignment and structure
>d1s1fa_ a.104.1.1 (A:) Cyp158a2 {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1lfka_ a.104.1.1 (A:) p450 monoxygenase OxyB {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure
>d1ue8a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus tokodaii [TaxId: 111955]} Back     information, alignment and structure
>d1io7a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Back     information, alignment and structure