Citrus Sinensis ID: 040505

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------23
MDFLFNLENIPTDESKLSFITIVLATLIALIAGFFRLNKVSLGNKFAPGSFGTVARERNKRKPLPPGPAPWPIVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRLGNVHVIPVTSPEIALEFLKVHDSVFASRPLTMGTEYLSGGFLSIAVVPWGQQWKKMRKVVASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVARRYCGNVIRKIMFSR
ccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHcccEEEEEcccccEEEEccHHHHHHHHHHccccccccccccHHHHHccccccEEEccccHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEHHHHHHHHHHHHHHHHHHcc
ccHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccEEccHHHHccccccHHHHHHHHHHHcccEEEEEcccEEEEEEccHHHHHHHHHccccHEccccccHHHHHHEcccccEEEccccHHHHHHHHHHHHHHHcHHHHHcHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHcc
mdflfnleniptdeskLSFITIVLATLIALIAGFFRLnkvslgnkfapgsfgtvarernkrkplppgpapwpivgslpemwrnkptFKWIHGLMRELNTNICCirlgnvhvipvtspEIALEFLKVHDsvfasrpltmgteylsGGFLSIAVVPWGQQWKKMRKVVASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVARRYCGNVIRKIMFSR
MDFLFNLeniptdeskLSFITIVLATLIALIAGFFRLNKVSLGNKFapgsfgtvarernkrkplppgpapwpivgslpeMWRNKPTFKWIHGLMRELNTNICCIRLGNVHVIPVTSPEIALEFLKVHDSVFASRPLTMGTEYLSGGFLSIAVVPWGQQWKKMRKVVASHVlhsvrldsllvKRREEAEELVSfvynqcirnnvdsvinvRLVARRycgnvirkimfsr
MDFLFNLENIPTDESKLSFitivlatlialiaGFFRLNKVSLGNKFAPGSFGTVARERNKRKPLPPGPAPWPIVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRLGNVHVIPVTSPEIALEFLKVHDSVFASRPLTMGTEYLSGGFLSIAVVPWGQQWKKMRKVVASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVARRYCGNVIRKIMFSR
***LFNLENIPTDESKLSFITIVLATLIALIAGFFRLNKVSLGNKFAPGSFG*****************PWPIVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRLGNVHVIPVTSPEIALEFLKVHDSVFASRPLTMGTEYLSGGFLSIAVVPWGQQWKKMRKVVASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVARRYCGNVIRKIMF**
*******ENIPTDESKLSFITIVLATLIALIAGFFRLNKVSLGNKFAPGS******************APWPIVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRLGNVHVIPVTSPEIALEFLKVHDSVFASRPLTMGTEYLSGGFLSIAVVPWGQQWKKMRKVVASHVLHSVRLDSLLVKRREEAEELVSFVYNQ********VINVRLVARRYCGNVIRKIMFSR
MDFLFNLENIPTDESKLSFITIVLATLIALIAGFFRLNKVSLGNKFAPGSFGTVARERNKRKPLPPGPAPWPIVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRLGNVHVIPVTSPEIALEFLKVHDSVFASRPLTMGTEYLSGGFLSIAVVPWGQQWKKMRKVVASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVARRYCGNVIRKIMFSR
MDFLFNLENIPTDESKLSFITIVLATLIALIAGFFRLNKVSLGNKFAPGSFGTVARERNKRKPLPPGPAPWPIVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRLGNVHVIPVTSPEIALEFLKVHDSVFASRPLTMGTEYLSGGFLSIAVVPWGQQWKKMRKVVASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVARRYCGNVIRKIMFSR
ooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MDFLFNLENIPTDESKLSFITIVLATLIALIAGFFRLNKVSLGNKFAPGSFGTVARERNKRKPLPPGPAPWPIVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRLGNVHVIPVTSPEIALEFLKVHDSVFASRPLTMGTEYLSGGFLSIAVVPWGQQWKKMRKVVASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVARRYCGNVIRKIMFSR
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query228 2.2.26 [Sep-21-2011]
Q9FLC8 529 Phenylalanine N-monooxyge yes no 0.714 0.308 0.608 2e-54
Q6J540 536 Isoleucine N-monooxygenas N/A no 0.745 0.317 0.517 6e-49
Q6J541 535 Isoleucine N-monooxygenas N/A no 0.745 0.317 0.511 2e-48
Q501D8 543 Tryptophan N-monooxygenas no no 0.921 0.386 0.429 3e-44
O81345 542 Cytochrome P450 79B1 OS=S N/A no 0.885 0.372 0.435 1e-43
O81346 541 Tryptophan N-monooxygenas no no 0.723 0.304 0.479 3e-43
Q9M7B7 541 Valine N-monooxygenase 2 N/A no 0.671 0.282 0.493 2e-40
Q43135 558 Tyrosine N-monooxygenase N/A no 0.671 0.274 0.493 5e-40
Q9M7B8 542 Valine N-monooxygenase 1 N/A no 0.872 0.367 0.423 1e-37
Q949U1 538 Dihomomethionine N-hydrox no no 0.75 0.317 0.304 1e-23
>sp|Q9FLC8|C79A2_ARATH Phenylalanine N-monooxygenase OS=Arabidopsis thaliana GN=CYP79A2 PE=1 SV=1 Back     alignment and function desciption
 Score =  211 bits (538), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 101/166 (60%), Positives = 125/166 (75%), Gaps = 3/166 (1%)

Query: 64  LPPGPAPWPIVGSLPE-MWRNKPTFKWIHGLMRELNTNICCIRLGNVHVIPVTSPEIALE 122
           LPPGP  WP++G+LPE + RNKP F+WIH LM+ELNT+I CIRL N HVIPVTSP IA E
Sbjct: 40  LPPGPKSWPLIGNLPEILGRNKPVFRWIHSLMKELNTDIACIRLANTHVIPVTSPRIARE 99

Query: 123 FLKVHDSVFASRPLTMGTEYLSGGFLSIAVVPWGQQWKKMRKVVASHVLHSVRLDSLLVK 182
            LK  DSVFA+RPLTMGTEY S G+L++AV P G+QWKKMR+VVASHV        +L K
Sbjct: 100 ILKKQDSVFATRPLTMGTEYCSRGYLTVAVEPQGEQWKKMRRVVASHVTSKKSFQMMLQK 159

Query: 183 RREEAEELVSFVYNQCIRN--NVDSVINVRLVARRYCGNVIRKIMF 226
           R EEA+ LV ++ N+ ++N  N   VI++RL  R+Y GNV RK+MF
Sbjct: 160 RTEEADNLVRYINNRSVKNRGNAFVVIDLRLAVRQYSGNVARKMMF 205
Converts L-phenylalanine into phenylacetaldoxime, the precursor of benzylglucosinolate (glucotropeolin).
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: 4EC: .EC: 1EC: 3EC: .EC: 1EC: 2EC: 4
>sp|Q6J540|C79D4_LOTJA Isoleucine N-monooxygenase 2 OS=Lotus japonicus GN=CYP79D4 PE=1 SV=1 Back     alignment and function description
>sp|Q6J541|C79D3_LOTJA Isoleucine N-monooxygenase 1 OS=Lotus japonicus GN=CYP79D3 PE=1 SV=1 Back     alignment and function description
>sp|Q501D8|C79B3_ARATH Tryptophan N-monooxygenase 2 OS=Arabidopsis thaliana GN=CYP79B3 PE=1 SV=1 Back     alignment and function description
>sp|O81345|C79B1_SINAL Cytochrome P450 79B1 OS=Sinapis alba GN=CYP79B1 PE=2 SV=1 Back     alignment and function description
>sp|O81346|C79B2_ARATH Tryptophan N-monooxygenase 1 OS=Arabidopsis thaliana GN=CYP79B2 PE=1 SV=2 Back     alignment and function description
>sp|Q9M7B7|C79D2_MANES Valine N-monooxygenase 2 OS=Manihot esculenta GN=CYP79D2 PE=1 SV=1 Back     alignment and function description
>sp|Q43135|C79A1_SORBI Tyrosine N-monooxygenase OS=Sorghum bicolor GN=CYP79A1 PE=1 SV=3 Back     alignment and function description
>sp|Q9M7B8|C79D1_MANES Valine N-monooxygenase 1 OS=Manihot esculenta GN=CYP79D1 PE=1 SV=1 Back     alignment and function description
>sp|Q949U1|C79F1_ARATH Dihomomethionine N-hydroxylase OS=Arabidopsis thaliana GN=CYP79F1 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query228
225436668 554 PREDICTED: phenylalanine N-monooxygenase 0.719 0.296 0.625 3e-56
225448667 495 PREDICTED: phenylalanine N-monooxygenase 0.723 0.333 0.610 5e-56
225435991 544 PREDICTED: phenylalanine N-monooxygenase 0.929 0.389 0.508 6e-56
147794417 495 hypothetical protein VITISV_022990 [Viti 0.719 0.331 0.625 1e-55
147815868 572 hypothetical protein VITISV_000261 [Viti 0.776 0.309 0.587 2e-55
359479256 571 PREDICTED: LOW QUALITY PROTEIN: phenylal 0.903 0.360 0.515 2e-55
225448665 494 PREDICTED: phenylalanine N-monooxygenase 0.723 0.334 0.614 3e-55
359486466 495 PREDICTED: phenylalanine N-monooxygenase 0.723 0.333 0.598 7e-55
359486464 495 PREDICTED: phenylalanine N-monooxygenase 0.723 0.333 0.604 1e-54
225464107 550 PREDICTED: phenylalanine N-monooxygenase 0.776 0.321 0.585 3e-54
>gi|225436668|ref|XP_002276655.1| PREDICTED: phenylalanine N-monooxygenase-like [Vitis vinifera] Back     alignment and taxonomy information
 Score =  223 bits (569), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 105/168 (62%), Positives = 130/168 (77%), Gaps = 4/168 (2%)

Query: 64  LPPGPAPWPIVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRLGNVHVIPVTSPEIALEF 123
           LPPGPAPWP+V +LP +  NKPTF+WIHG M+E+NT I CI+LGNVHVIPVTSPEI+ EF
Sbjct: 62  LPPGPAPWPLVRNLPHLLNNKPTFRWIHGFMKEMNTEIACIQLGNVHVIPVTSPEISKEF 121

Query: 124 LKVHDSVFASRPLTMGTEYLSGGFLSIAVVPWGQQWKKMRKVVASHVLHSVRLDSLLVKR 183
           LK HD+VFASRP+TM +EY SGGFL+ AVVPWG QWKKMR+V+AS+V++      L  KR
Sbjct: 122 LKKHDAVFASRPITMASEYSSGGFLTTAVVPWGDQWKKMRRVLASNVINPSTFRWLHDKR 181

Query: 184 REEAEELVSFVYNQC----IRNNVDSVINVRLVARRYCGNVIRKIMFS 227
            EE + LV +VYNQC      N + SVIN+R  AR+Y GN IRK++ +
Sbjct: 182 VEETDNLVRYVYNQCKISTSNNCLGSVINLRNTARQYSGNAIRKMILN 229

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225448667|ref|XP_002274698.1| PREDICTED: phenylalanine N-monooxygenase-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|225435991|ref|XP_002269843.1| PREDICTED: phenylalanine N-monooxygenase [Vitis vinifera] Back     alignment and taxonomy information
>gi|147794417|emb|CAN75997.1| hypothetical protein VITISV_022990 [Vitis vinifera] Back     alignment and taxonomy information
>gi|147815868|emb|CAN61661.1| hypothetical protein VITISV_000261 [Vitis vinifera] Back     alignment and taxonomy information
>gi|359479256|ref|XP_003632241.1| PREDICTED: LOW QUALITY PROTEIN: phenylalanine N-monooxygenase-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|225448665|ref|XP_002274641.1| PREDICTED: phenylalanine N-monooxygenase-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|359486466|ref|XP_002274952.2| PREDICTED: phenylalanine N-monooxygenase-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|359486464|ref|XP_003633447.1| PREDICTED: phenylalanine N-monooxygenase-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|225464107|ref|XP_002264201.1| PREDICTED: phenylalanine N-monooxygenase [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query228
UNIPROTKB|Q6J540 536 CYP79D4 "Isoleucine N-monooxyg 0.745 0.317 0.517 3e-46
UNIPROTKB|Q6J541 535 CYP79D3 "Isoleucine N-monooxyg 0.745 0.317 0.511 4.8e-46
UNIPROTKB|Q9M7B7 541 CYP79D2 "Valine N-monooxygenas 0.745 0.314 0.502 2.1e-45
UNIPROTKB|Q9M7B8 542 CYP79D1 "Valine N-monooxygenas 0.745 0.313 0.468 8.1e-44
TAIR|locus:2041293 543 CYP79B3 ""cytochrome P450, fam 0.728 0.305 0.482 5.2e-42
TAIR|locus:2140020 541 CYP79B2 ""cytochrome P450, fam 0.723 0.304 0.479 1.7e-41
TAIR|locus:2015282 530 CYP79C2 "cytochrome p450 79c2" 0.723 0.311 0.393 9.2e-29
TAIR|locus:2207355 546 CYP79C1 ""cytochrome P450, fam 0.767 0.320 0.379 1.4e-28
TAIR|locus:2032890 538 CYP79F1 "cytochrome p450 79f1" 0.745 0.315 0.306 5.4e-22
TAIR|locus:2032865 537 CYP79F2 ""cytochrome P450, fam 0.767 0.325 0.292 4e-21
UNIPROTKB|Q6J540 CYP79D4 "Isoleucine N-monooxygenase 2" [Lotus japonicus (taxid:34305)] Back     alignment and assigned GO terms
 Score = 485 (175.8 bits), Expect = 3.0e-46, P = 3.0e-46
 Identities = 89/172 (51%), Positives = 124/172 (72%)

Query:    58 RNKRKPLPPGPAPWPIVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRLGNVHVIPVTSP 117
             ++K+  LPPGP PWPIVG+LPEM  N+P   WIH LM+E+NT I CIRL N  VIPVT P
Sbjct:    39 KSKKYKLPPGPKPWPIVGNLPEMLANRPATIWIHKLMKEMNTEIACIRLANTIVIPVTCP 98

Query:   118 EIALEFLKVHDSVFASRPLTMGTEYLSGGFLSIAVVPWGQQWKKMRKVVASHVLHSVRLD 177
              IA EFLK HD+ FASRP  M T+  S GFL+  +VP+G+QWKKM++V+ +++L   +  
Sbjct:    99 TIACEFLKKHDASFASRPKIMSTDIASDGFLTTVLVPYGEQWKKMKRVLVNNLLSPQKHQ 158

Query:   178 SLLVKRREEAEELVSFVYNQCIR--NNVDSVINVRLVARRYCGNVIRKIMFS 227
              LL KR EEA+ L+ ++YN+C +  N+   ++N+R+ A+ Y GNV RK++F+
Sbjct:   159 WLLGKRNEEADNLMFYIYNKCCKDVNDGPGLVNIRIAAQHYGGNVFRKLIFN 210
GO:0004497 "monooxygenase activity" evidence=IDA
GO:0019756 "cyanogenic glycoside biosynthetic process" evidence=IDA
UNIPROTKB|Q6J541 CYP79D3 "Isoleucine N-monooxygenase 1" [Lotus japonicus (taxid:34305)] Back     alignment and assigned GO terms
UNIPROTKB|Q9M7B7 CYP79D2 "Valine N-monooxygenase 2" [Manihot esculenta (taxid:3983)] Back     alignment and assigned GO terms
UNIPROTKB|Q9M7B8 CYP79D1 "Valine N-monooxygenase 1" [Manihot esculenta (taxid:3983)] Back     alignment and assigned GO terms
TAIR|locus:2041293 CYP79B3 ""cytochrome P450, family 79, subfamily B, polypeptide 3"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2140020 CYP79B2 ""cytochrome P450, family 79, subfamily B, polypeptide 2"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2015282 CYP79C2 "cytochrome p450 79c2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2207355 CYP79C1 ""cytochrome P450, family 79, subfamily C, polypeptide 1"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2032890 CYP79F1 "cytochrome p450 79f1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2032865 CYP79F2 ""cytochrome P450, family 79, subfamily F, polypeptide 2"" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00029427001
SubName- Full=Chromosome chr13 scaffold_48, whole genome shotgun sequence; (555 aa)
(Vitis vinifera)
Predicted Functional Partners:
GSVIVG00025135001
SubName- Full=Chromosome chr4 scaffold_32, whole genome shotgun sequence; (189 aa)
  •     0.419

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query228
PLN02971 543 PLN02971, PLN02971, tryptophan N-hydroxylase 4e-55
PLN03018 534 PLN03018, PLN03018, homomethionine N-hydroxylase 4e-30
PLN03112 514 PLN03112, PLN03112, cytochrome P450 family protein 8e-25
PLN02687 517 PLN02687, PLN02687, flavonoid 3'-monooxygenase 4e-24
PLN02183 516 PLN02183, PLN02183, ferulate 5-hydroxylase 4e-20
PLN02966 502 PLN02966, PLN02966, cytochrome P450 83A1 8e-14
PLN00110 504 PLN00110, PLN00110, flavonoid 3',5'-hydroxylase (F 1e-11
pfam00067 461 pfam00067, p450, Cytochrome P450 2e-11
PLN03234 499 PLN03234, PLN03234, cytochrome P450 83B1; Provisio 2e-11
PLN02394 503 PLN02394, PLN02394, trans-cinnamate 4-monooxygenas 2e-08
PLN00168 519 PLN00168, PLN00168, Cytochrome P450; Provisional 2e-05
PTZ00404 482 PTZ00404, PTZ00404, cytochrome P450; Provisional 0.001
>gnl|CDD|166612 PLN02971, PLN02971, tryptophan N-hydroxylase Back     alignment and domain information 
 Score =  184 bits (467), Expect = 4e-55
 Identities = 90/210 (42%), Positives = 131/210 (62%), Gaps = 14/210 (6%)

Query: 18  SFITI-VLATLIALIAGFFRLNKVSLGNKFAPGSFGTVARERNKRKPLPPGPAPWPIVGS 76
           SF  + +L TL AL+A    +  + +  K    S         K  PLPPGP  +PIVG 
Sbjct: 21  SFTNMYLLTTLQALVA----ITLLMILKKLKSSS------RNKKLHPLPPGPTGFPIVGM 70

Query: 77  LPEMWRNKPTFKWIHGLMRELNTNICCIRLGNVHVIPVTSPEIALEFLKVHDSVFASRPL 136
           +P M +N+P F+W+H LM+ELNT I C+RLGN HVIPVT P+IA E  K  D++FASRPL
Sbjct: 71  IPAMLKNRPVFRWLHSLMKELNTEIACVRLGNTHVIPVTCPKIAREIFKQQDALFASRPL 130

Query: 137 TMGTEYLSGGFLSIAVVPWGQQWKKMRKVVASHVLHSVRLDSLLVKRREEAEELVSFVYN 196
           T   + LS G+ +  + P+G+Q+KKMRKV+ + ++   R   L   R EE + L +++YN
Sbjct: 131 TYAQKILSNGYKTCVITPFGEQFKKMRKVIMTEIVCPARHRWLHDNRAEETDHLTAWLYN 190

Query: 197 QCIRNNVDSVINVRLVARRYCGNVIRKIMF 226
             ++N+    +++R V R YCGN I+++MF
Sbjct: 191 M-VKNS--EPVDLRFVTRHYCGNAIKRLMF 217

Length = 543
>gnl|CDD|178592 PLN03018, PLN03018, homomethionine N-hydroxylase Back     alignment and domain information
>gnl|CDD|215583 PLN03112, PLN03112, cytochrome P450 family protein; Provisional Back     alignment and domain information
>gnl|CDD|215371 PLN02687, PLN02687, flavonoid 3'-monooxygenase Back     alignment and domain information
>gnl|CDD|165828 PLN02183, PLN02183, ferulate 5-hydroxylase Back     alignment and domain information
>gnl|CDD|178550 PLN02966, PLN02966, cytochrome P450 83A1 Back     alignment and domain information
>gnl|CDD|177725 PLN00110, PLN00110, flavonoid 3',5'-hydroxylase (F3'5'H); Provisional Back     alignment and domain information
>gnl|CDD|215689 pfam00067, p450, Cytochrome P450 Back     alignment and domain information
>gnl|CDD|178773 PLN03234, PLN03234, cytochrome P450 83B1; Provisional Back     alignment and domain information
>gnl|CDD|215221 PLN02394, PLN02394, trans-cinnamate 4-monooxygenase Back     alignment and domain information
>gnl|CDD|215086 PLN00168, PLN00168, Cytochrome P450; Provisional Back     alignment and domain information
>gnl|CDD|173595 PTZ00404, PTZ00404, cytochrome P450; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 228
KOG0156 489 consensus Cytochrome P450 CYP2 subfamily [Secondar 99.97
PLN02971 543 tryptophan N-hydroxylase 99.95
PLN02687 517 flavonoid 3'-monooxygenase 99.95
PLN00110 504 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional 99.94
PLN03112 514 cytochrome P450 family protein; Provisional 99.94
PTZ00404 482 cytochrome P450; Provisional 99.94
PLN00168 519 Cytochrome P450; Provisional 99.93
PLN02394 503 trans-cinnamate 4-monooxygenase 99.93
PLN03234 499 cytochrome P450 83B1; Provisional 99.93
PLN02966 502 cytochrome P450 83A1 99.93
PLN02183 516 ferulate 5-hydroxylase 99.93
PLN03018 534 homomethionine N-hydroxylase 99.93
PLN02196 463 abscisic acid 8'-hydroxylase 99.92
PLN02655 466 ent-kaurene oxidase 99.92
KOG0158 499 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subf 99.92
PLN02290 516 cytokinin trans-hydroxylase 99.92
PLN02500 490 cytochrome P450 90B1 99.92
PLN02302 490 ent-kaurenoic acid oxidase 99.9
PLN02774 463 brassinosteroid-6-oxidase 99.88
PF00067 463 p450: Cytochrome P450 p450 superfamily signature b 99.88
KOG0157 497 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfami 99.87
PLN03141 452 3-epi-6-deoxocathasterone 23-monooxygenase; Provis 99.87
PLN02169 500 fatty acid (omega-1)-hydroxylase/midchain alkane h 99.87
PLN03195 516 fatty acid omega-hydroxylase; Provisional 99.86
PLN02738 633 carotene beta-ring hydroxylase 99.86
PLN02987 472 Cytochrome P450, family 90, subfamily A 99.85
PLN02936 489 epsilon-ring hydroxylase 99.83
PLN02648 480 allene oxide synthase 99.83
KOG0159 519 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 99.78
PLN02426 502 cytochrome P450, family 94, subfamily C protein 99.7
KOG0684 486 consensus Cytochrome P450 [Secondary metabolites b 99.39
COG2124 411 CypX Cytochrome P450 [Secondary metabolites biosyn 98.99
KOG0114124 consensus Predicted RNA-binding protein (RRM super 81.71
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information 
Probab=99.97  E-value=1.6e-28  Score=202.62  Aligned_cols=163  Identities=33%  Similarity=0.537  Sum_probs=145.4

Q ss_pred             CCCCCCCCCCCcccccccccccCCCCchHHHHHHHHHhCCceEEEEecCeeEEEEcCHHHHHHHHHhcCCCCCCCCc-hh
Q 040505           60 KRKPLPPGPAPWPIVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRLGNVHVIPVTSPEIALEFLKVHDSVFASRPL-TM  138 (228)
Q Consensus        60 ~~~~~pPgP~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~~v~~~~~~~~~~v~i~~p~~~~~vl~~~~~~~~~~~~-~~  138 (228)
                      +..++||||+++|++||++++... +.|..+.++.++||| ++.+++|..++|+++|+++++|++++++..|++|+. ..
T Consensus        23 ~~~~lPPGP~~lPiIGnl~~l~~~-~~h~~~~~ls~~yGp-i~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~~~  100 (489)
T KOG0156|consen   23 KRRNLPPGPPPLPIIGNLHQLGSL-PPHRSFRKLSKKYGP-VFTLRLGSVPVVVISSYEAAKEVLVKQDLEFADRPDPTA  100 (489)
T ss_pred             CCCCCCcCCCCCCccccHHHcCCC-chhHHHHHHHHHhCC-eEEEEecCceEEEECCHHHHHHHHHhCCccccCCCCchh
Confidence            348899999999999999999765 458999999999999 999999999999999999999999999999999997 33


Q ss_pred             hhhhccCCccceeecCCChhHHHHHHHHHHhhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCCCCccccHHHHHHHHHH
Q 040505          139 GTEYLSGGFLSIAVVPWGQQWKKMRKVVASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVARRYCG  218 (228)
Q Consensus       139 ~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~~~~t~  218 (228)
                      ....+..++.+++++.+|+.|+++||.....+++.+.+++....-.++++++++.+.+ .+   .+.++|+.+.+..++.
T Consensus       101 ~~~~~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R~~E~~~l~~~l~~-~~---~~~~vdl~~~l~~~~~  176 (489)
T KOG0156|consen  101 TLKYLSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIREEEVDELVKKLSK-SK---KGEPVDLSELLDLLVG  176 (489)
T ss_pred             hHHHhcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHHHHHHHHHHHHHHh-cC---CCceeeHHHHHHHHHH
Confidence            5566776667889998999999999999999989999998888889999999999987 21   1258999999999999


Q ss_pred             HHHHHHHcCC
Q 040505          219 NVIRKIMFSR  228 (228)
Q Consensus       219 dii~~~~fG~  228 (228)
                      ++|++++||+
T Consensus       177 nvI~~~~fG~  186 (489)
T KOG0156|consen  177 NVICRMLFGR  186 (489)
T ss_pred             HHHHHHHhCC
Confidence            9999999995

>PLN02971 tryptophan N-hydroxylase Back     alignment and domain information
>PLN02687 flavonoid 3'-monooxygenase Back     alignment and domain information
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional Back     alignment and domain information
>PLN03112 cytochrome P450 family protein; Provisional Back     alignment and domain information
>PTZ00404 cytochrome P450; Provisional Back     alignment and domain information
>PLN00168 Cytochrome P450; Provisional Back     alignment and domain information
>PLN02394 trans-cinnamate 4-monooxygenase Back     alignment and domain information
>PLN03234 cytochrome P450 83B1; Provisional Back     alignment and domain information
>PLN02966 cytochrome P450 83A1 Back     alignment and domain information
>PLN02183 ferulate 5-hydroxylase Back     alignment and domain information
>PLN03018 homomethionine N-hydroxylase Back     alignment and domain information
>PLN02196 abscisic acid 8'-hydroxylase Back     alignment and domain information
>PLN02655 ent-kaurene oxidase Back     alignment and domain information
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PLN02290 cytokinin trans-hydroxylase Back     alignment and domain information
>PLN02500 cytochrome P450 90B1 Back     alignment and domain information
>PLN02302 ent-kaurenoic acid oxidase Back     alignment and domain information
>PLN02774 brassinosteroid-6-oxidase Back     alignment and domain information
>PF00067 p450: Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature; InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry Back     alignment and domain information
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism] Back     alignment and domain information
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional Back     alignment and domain information
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase Back     alignment and domain information
>PLN03195 fatty acid omega-hydroxylase; Provisional Back     alignment and domain information
>PLN02738 carotene beta-ring hydroxylase Back     alignment and domain information
>PLN02987 Cytochrome P450, family 90, subfamily A Back     alignment and domain information
>PLN02936 epsilon-ring hydroxylase Back     alignment and domain information
>PLN02648 allene oxide synthase Back     alignment and domain information
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PLN02426 cytochrome P450, family 94, subfamily C protein Back     alignment and domain information
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>KOG0114 consensus Predicted RNA-binding protein (RRM superfamily) [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query228
2q6n_A 478 Structure Of Cytochrome P450 2b4 With Bound 1-(4- C 1e-04
4h1n_A 479 Crystal Structure Of P450 2b4 F297a Mutant In Compl 1e-04
3tk3_A 476 Cytochrome P450 2b4 Mutant L437a In Complex With 4- 1e-04
1po5_A 476 Structure Of Mammalian Cytochrome P450 2b4 Length = 1e-04
1suo_A 476 Structure Of Mammalian Cytochrome P450 2b4 With Bou 1e-04
3pm0_A 507 Structural Characterization Of The Complex Between 8e-04
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4- Cholorophenyl)imidazole Length = 478 Back     alignment and structure 
Iteration: 1

 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/176 (21%), Positives = 85/176 (48%), Gaps = 10/176 (5%)
Query: 54  VARERNKRKPLPPGPAPWPIVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRLGNVHVIP 113
           +A++ + +  LPPGP+P P++G+L +M R      ++   +RE   ++  + LG+  V+ 
Sbjct: 1   MAKKTSSKGKLPPGPSPLPVLGNLLQMDRKGLLRSFLR--LREKYGDVFTVYLGSRPVVV 58
Query: 114 VTSPEIALEFLKVHDSVFASRPLTMGTEYLSGGFLSIAVVPWGQQWKKMRKV-VASHVLH 172
           +   +   E L      F+ R      + +  G+    +   G++W+ +R+  +A+    
Sbjct: 59  LCGTDAIREALVDQAEAFSGRGKIAVVDPIFQGY--GVIFANGERWRALRRFSLATMRDF 116
Query: 173 SVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVARRYCGNVIRKIMFSR 228
            +   S+  + +EEA  LV     + +R +  ++++  L+      N+I  I+F +
Sbjct: 117 GMGKRSVEERIQEEARCLV-----EELRKSKGALLDNTLLFHSITSNIICSIVFGK 167
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With Anti- Platelet Drug Clopidogrel Length = 479 Back     alignment and structure
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With 4-(4-Chlorophenyl) Imidazole Length = 476 Back     alignment and structure
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 Length = 476 Back     alignment and structure
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound 4-(4- Chlorophenyl)imidazole Length = 476 Back     alignment and structure
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha- Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1) Length = 507 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query228
3n9y_A 487 Cholesterol SIDE-chain cleavage enzyme; cytochrome 8e-26
3k9v_A 482 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitocho 7e-25
3dax_A 491 Cytochrome P450 7A1; cholesterol, cholesterol 7-al 1e-20
3b98_A 475 Prostaglandin I2 synthase; prostacyclin synthase, 3e-20
3swz_A 494 Steroid 17-alpha-hydroxylase/17,20 lyase; cytochro 5e-17
3czh_A 481 Cytochrome P450 2R1; vitamin D, vitamin S 25-hydro 6e-16
3pm0_A 507 Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase 9e-16
3b6h_A 498 Prostacyclin synthase; enzyme-inhibitor complex, C 8e-15
2hi4_A 495 Cytochrome P450 1A2; CYP1A2, monooxygenase, drug m 2e-14
3tbg_A 479 Cytochrome P450 2D6; monooxygenase, thioridazine, 4e-14
1r9o_A 477 Cytochrome P450 2C9; monooxygenase, drug metaboliz 2e-13
2fdv_A 476 Cytochrome P450 2A6; CYP2A6, monooxygenase, drug m 2e-12
3qz1_A 496 Steroid 21-hydroxylase; P450 monooxygenase, oxidor 3e-12
1po5_A 476 Cytochrome P450 2B4; oxidoreductase, membrane prot 6e-12
3e6i_A 476 CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, mono 2e-11
3s79_A 503 Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD 3e-11
2ve3_A 444 Putative cytochrome P450 120; oxidoreductase, mono 5e-10
2cib_A 455 Cytochrome P450 51; heme, heme lipid synthesis, me 5e-10
3dbg_A 467 Putative cytochrome P450; cytochrome P450 oxidored 4e-09
3gw9_A 450 Sterol 14alpha-demethylase; CYP51, cytochrome P450 3e-08
3awm_A 415 Fatty acid alpha-hydroxylase; cytochrome P450, per 4e-08
1izo_A 417 P450bsbeta, cytochrome P450 152A1; heme protein, p 6e-08
2ij2_A 470 Cytochrome P450 BM3; monoxygenase, heme binding pr 2e-06
3i3k_A 461 Lanosterol 14-alpha demethylase; cytochrome P450, 1e-05
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A* Length = 487 Back     alignment and structure
 Score =  103 bits (259), Expect = 8e-26
 Identities = 25/176 (14%), Positives = 50/176 (28%), Gaps = 9/176 (5%)

Query: 60  KRKPL--PPGPAPWPIVGSLPEMWRNKPTFKWIHGLMRELNT---NICCIRLGNVHVIPV 114
             +P    P P     +               +H    +       I   +LGNV  + V
Sbjct: 4   SPRPFNEIPSPGDNGWLNLYHFWRETGT--HKVHLHHVQNFQKYGPIYREKLGNVESVYV 61

Query: 115 TSPEIALEFLKVHDSVFASRPLTMGTEY-LSGGFLSIAVVPWGQQWKKMRKVVASHVLHS 173
             PE      K          +     Y          ++     WKK R  +   V+  
Sbjct: 62  IDPEDVALLFKSEGPNPERFLIPPWVAYHQYYQRPIGVLLKKSAAWKKDRVALNQEVMAP 121

Query: 174 VRLDSLLVKRREEAEELVSFVYNQCIRN-NVDSVINVRLVARRYCGNVIRKIMFSR 228
               + L      + + VS ++ +  +  + +   ++     R+    I  ++F  
Sbjct: 122 EATKNFLPLLDAVSRDFVSVLHRRIKKAGSGNYSGDISDDLFRFAFESITNVIFGE 177
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A* Length = 482 Back     alignment and structure
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A* Length = 491 Back     alignment and structure
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A* Length = 475 Back     alignment and structure
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A* Length = 494 Back     alignment and structure
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A* Length = 481 Back     alignment and structure
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens} Length = 507 Back     alignment and structure
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A* Length = 498 Back     alignment and structure
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens} Length = 495 Back     alignment and structure
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A* Length = 479 Back     alignment and structure
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A* Length = 477 Back     alignment and structure
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A* Length = 476 Back     alignment and structure
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus} Length = 496 Back     alignment and structure
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A* Length = 476 Back     alignment and structure
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A* Length = 476 Back     alignment and structure
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* Length = 503 Back     alignment and structure
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A* Length = 444 Back     alignment and structure
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A* Length = 455 Back     alignment and structure
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A* Length = 467 Back     alignment and structure
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A* Length = 450 Back     alignment and structure
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A* Length = 415 Back     alignment and structure
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A* Length = 417 Back     alignment and structure
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ... Length = 470 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query228
3swz_A 494 Steroid 17-alpha-hydroxylase/17,20 lyase; cytochro 99.94
3nxu_A 485 Cytochrome P450 3A4; alpha beta protein, cytochrom 99.93
3pm0_A 507 Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase 99.93
3tbg_A 479 Cytochrome P450 2D6; monooxygenase, thioridazine, 99.93
3s79_A 503 Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD 99.92
3e6i_A 476 CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, mono 99.92
3k9v_A 482 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitocho 99.92
1po5_A 476 Cytochrome P450 2B4; oxidoreductase, membrane prot 99.91
3qz1_A 496 Steroid 21-hydroxylase; P450 monooxygenase, oxidor 99.91
2hi4_A 495 Cytochrome P450 1A2; CYP1A2, monooxygenase, drug m 99.91
2fdv_A 476 Cytochrome P450 2A6; CYP2A6, monooxygenase, drug m 99.9
3czh_A 481 Cytochrome P450 2R1; vitamin D, vitamin S 25-hydro 99.9
1r9o_A 477 Cytochrome P450 2C9; monooxygenase, drug metaboliz 99.9
3n9y_A 487 Cholesterol SIDE-chain cleavage enzyme; cytochrome 99.89
2ve3_A 444 Putative cytochrome P450 120; oxidoreductase, mono 99.88
3ld6_A 461 Lanosterol 14-alpha demethylase; cytochrome P450, 99.88
2ij2_A 470 Cytochrome P450 BM3; monoxygenase, heme binding pr 99.88
3gw9_A 450 Sterol 14alpha-demethylase; CYP51, cytochrome P450 99.87
3i3k_A 461 Lanosterol 14-alpha demethylase; cytochrome P450, 99.86
2cib_A 455 Cytochrome P450 51; heme, heme lipid synthesis, me 99.85
3v8d_A 491 Cholesterol 7-alpha-monooxygenase; cytochrome, oxi 99.84
3dbg_A 467 Putative cytochrome P450; cytochrome P450 oxidored 99.84
2cd8_A 436 Cytochrome P450 monooxygenase; oxidoreductase, PIK 99.82
3dsk_A 495 Cytochrome P450 74A, chloroplast; P450 fold, fatty 99.8
3mdm_A 456 Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, th 99.79
1n97_A 389 CYP175A1; electron transport; HET: SRT HEM; 1.80A 99.79
3dax_A 491 Cytochrome P450 7A1; cholesterol, cholesterol 7-al 99.78
1jfb_A 404 Nitric-oxide reductase cytochrome P450 55A1; cytoc 99.77
3dan_A 473 Cytochrome P450 74A2; AOS heme cytochrome P450 str 99.75
1izo_A 417 P450bsbeta, cytochrome P450 152A1; heme protein, p 99.74
3b6h_A 498 Prostacyclin synthase; enzyme-inhibitor complex, C 99.74
3awm_A 415 Fatty acid alpha-hydroxylase; cytochrome P450, per 99.73
1ued_A 406 P450 OXYC, P450 monooxygenase; cytochrome P450 van 99.73
3b98_A 475 Prostaglandin I2 synthase; prostacyclin synthase, 99.71
2zbx_A 412 Cytochrome P450-SU1; beta prism, heme, iron, metal 99.69
1s1f_A 406 Putative cytochrome P450; cytochrome P450 oxidored 99.65
2zwu_A 415 Camphor 5-monooxygenase; P450CAM, camphor-hydroxyl 99.65
3ivy_A 433 Cytochrome P450 CYP125; cholesterol, monooxygenase 99.64
1cpt_A 428 Cytochrome P450-TERP; oxidoreductase(oxygenase); H 99.61
3abb_A 408 CYP105D6, cytochrome P450 hydroxylase; oxidoreduct 99.61
2jjn_A 411 Cytochrome P450 113A1; oxidoreductase, iron, heme, 99.61
3oo3_A 384 OXY protein; cytochrome P450, monooxygenase, PCD-t 99.6
3ejb_B 404 Biotin biosynthesis cytochrome P450-like enzyme; p 99.58
3aba_A 403 Cytochrome P450; oxidoreductase, heme, monooxygena 99.58
3a4g_A 411 Vitamin D hydroxylase; cytochrome P450, hemoprotei 99.57
3tyw_A 417 Putative cytochrome P450; P450 monooxygenase, oxid 99.57
1z8o_A 404 6-deoxyerythronolide B hydroxylase; heme, CYP, ery 99.57
2wm5_A 435 CYP124, putative cytochrome P450 124; metal-bindin 99.56
2y5n_A 417 MYCG, P-450-like protein; oxidoreductase, mycinami 99.55
1odo_A 408 Putative cytochrome P450 154A1; P450 monooxygenase 99.55
2dkk_A 411 Cytochrome P450; CYP158A1, INHI oxidoreductase; HE 99.55
2z36_A 413 MOXA, cytochrome P450 type compactin 3'',4''- hydr 99.53
2xbk_A 404 PIMD protein; epoxidation, oxidoreductase; HET: HE 99.53
4fb2_A 398 P450CIN; heme, monooxygenase, cindoxin, oxidoreduc 99.51
3tkt_A 450 Cytochrome P450; aromatic hydrocarbon binding of P 99.51
2z3t_A 425 Cytochrome P450; monoxygenase, oxydoreductase, hem 99.49
1gwi_A 411 CYP154C1, cytochrome P450 154C1; oxidoreductase, m 99.49
2xkr_A 398 CYP142, putative cytochrome P450 142; oxidoreducta 99.49
2uuq_A 414 CYP130, cytochrome P450 130; iron, heme, monooxyge 99.47
1q5d_A 419 P450 epoxidase; cytochrome P450, epothilone, oxydo 99.46
3buj_A 397 CALO2; heme, iron, metal-binding, monooxygenase, o 99.43
1io7_A 368 Cytochrome P450 CYP119; thermophilic, cytochromo P 99.42
1lfk_A 398 OXYB, P450 monooxygenase; oxidative phenol couplin 99.41
3mgx_A 415 Putative P450 monooxygenase; cytochrome P450 oxida 99.41
1n40_A 396 P450 MT2, cytochrome P450 121; heme binding, oxyge 99.41
2rfb_A 343 Cytochrome P450; heme, iron, metal-binding, monoox 99.38
3nc3_A 441 Cytochrome P450 CYPX; cytochrome P450 oxidase, HAE 99.37
3r9b_A 418 Cytochrome P450 164A2; monooxygenase, oxidoreducta 99.37
3lxh_A 421 Cytochrome P450; heme, iron, metal-binding, monoox 99.37
3oft_A 396 Cytochrome P450, CYP101C1; oxidoreductase; HET: HE 99.35
3rwl_A 426 Cytochrome P450 alkane hydroxylase 1 CYP153A7; P45 99.35
3b4x_A 367 367AA long hypothetical cytochrome P450; HEM prote 99.34
2wiy_A 394 XPLA-heme, cytochrome P450-like protein XPLA; CYT- 99.19
3p3o_A 416 Cytochrome P450; monooxygenase, oxidoreductase; HE 99.17
4dnj_A 412 Putative cytochrome P450; oxidoreductase; HET: HEM 99.05
4dxy_A 417 Cytochrome P450, CYP101D2; cytochrome P450 mutant, 98.51
2yjn_B 381 Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; 97.97
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A* Back     alignment and structure
Probab=99.94  E-value=1.2e-26  Score=193.53  Aligned_cols=163  Identities=21%  Similarity=0.256  Sum_probs=133.0

Q ss_pred             CCCCCCCCCCCCcccccccccccCCCCchHHHHHHHHHhCCceEEEEecCeeEEEEcCHHHHHHHHHhcCCCCCCCCchh
Q 040505           59 NKRKPLPPGPAPWPIVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRLGNVHVIPVTSPEIALEFLKVHDSVFASRPLTM  138 (228)
Q Consensus        59 ~~~~~~pPgP~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~~v~~~~~~~~~~v~i~~p~~~~~vl~~~~~~~~~~~~~~  138 (228)
                      ++..+.||||+++|++||++++...+..+..+.+|+++||+ |+++++|+.+.|+++||+++++++.+++..|.+++...
T Consensus         4 ~~~~~~PPgP~~lPliGnl~~l~~~~~~~~~~~~~~~kYG~-i~~~~~g~~~~vvv~~p~~~k~il~~~~~~f~~rp~~~   82 (494)
T 3swz_A            4 KTGAKYPKSLLSLPLVGSLPFLPRHGHMHNNFFKLQKKYGP-IYSVRMGTKTTVIVGHHQLAKEVLIKKGKDFSGRPQMA   82 (494)
T ss_dssp             --------CCBCCCEEEEESSCTTSSCHHHHHHHTHHHHCS-EEEEEETTEEEEEECSHHHHHHHHTTTTTTTBBCCCCH
T ss_pred             CCCCCCCCCCCCCCeEcchHHhCCCCchhHHHHHHHHHcCC-EEEEEeCCCCEEEECCHHHHHHHHHhCcHhhCCCCCcH
Confidence            35667899999999999999886655557889999999998 99999999999999999999999998888898888665


Q ss_pred             hhhhccCCccceeecCCChhHHHHHHHHHHhhhch--hhhhHhHHHHHHHHHHHHHHHHHhchhCCCCccccHHHHHHHH
Q 040505          139 GTEYLSGGFLSIAVVPWGQQWKKMRKVVASHVLHS--VRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVARRY  216 (228)
Q Consensus       139 ~~~~~~~~~~~~~~~~~g~~w~~~R~~~~~~f~~~--~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~~~~  216 (228)
                      ..+.++.++.+++++.+|+.|+++||++.++| +.  ...+.+.+.+.++++.+++.|.+.     .+.++|+.+++..+
T Consensus        83 ~~~~~~~~~~gl~~~~~g~~wr~~Rr~~~~~f-~~~~~~~~~~~~~i~~~~~~l~~~l~~~-----~~~~vd~~~~~~~~  156 (494)
T 3swz_A           83 TLDIASNNRKGIAFADSGAHWQLHRRLAMATF-ALFKDGDQKLEKIICQEISTLCDMLATH-----NGQSIDISFPVFVA  156 (494)
T ss_dssp             HHHHHTTTTCSSSSSCSSHHHHHHHHHHHHHT-TTTSSSTTCHHHHHHHHHHHHHHHHHHT-----TTEEECCHHHHHHH
T ss_pred             HHHHhccCCCCeEeCCCCHHHHHHHHHHHHHH-HHhcchHHHHHHHHHHHHHHHHHHHHHc-----CCCcccHHHHHHHH
Confidence            55555554456667777999999999999998 42  346789999999999999998653     33489999999999


Q ss_pred             HHHHHHHHHcCC
Q 040505          217 CGNVIRKIMFSR  228 (228)
Q Consensus       217 t~dii~~~~fG~  228 (228)
                      ++|+|+.++||.
T Consensus       157 t~dvi~~~~fG~  168 (494)
T 3swz_A          157 VTNVISLICFNT  168 (494)
T ss_dssp             HHHHHHHHHHSC
T ss_pred             HHHHHHHHHcCC
Confidence            999999999994
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A* Back     alignment and structure
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens} Back     alignment and structure
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A* Back     alignment and structure
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* 4gl5_A* 4gl7_A* Back     alignment and structure
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A* Back     alignment and structure
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A* Back     alignment and structure
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A* Back     alignment and structure
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus} Back     alignment and structure
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens} Back     alignment and structure
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A* Back     alignment and structure
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A* Back     alignment and structure
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A* Back     alignment and structure
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A* Back     alignment and structure
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A* Back     alignment and structure
>3ld6_A Lanosterol 14-alpha demethylase; cytochrome P450, ketoconazole, S genomics, structural genomics consortium, SGC; HET: HEM KKK BCD; 2.80A {Homo sapiens} PDB: 3juv_A* 3jus_A* Back     alignment and structure
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ... Back     alignment and structure
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3tik_A* 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A* Back     alignment and structure
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A* Back     alignment and structure
>3v8d_A Cholesterol 7-alpha-monooxygenase; cytochrome, oxidoreductase; HET: HEM 0GV; 1.90A {Homo sapiens} PDB: 3sn5_A* 3dax_A* Back     alignment and structure
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A* Back     alignment and structure
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide monooxygenase, antibiotic biosynthesis, heme, iron, metal-binding; HET: HEM PXI; 1.7A {Streptomyces venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A* 2vz7_A* 2vsj_A* 2wi9_A* 2whw_A* Back     alignment and structure
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A* Back     alignment and structure
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* 4enh_A* 4fia_A* Back     alignment and structure
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A* Back     alignment and structure
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A* Back     alignment and structure
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR, atomic resolutio structural genomics/proteomics initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum} SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A* 1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A* 1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A* Back     alignment and structure
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A* Back     alignment and structure
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A* Back     alignment and structure
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A* Back     alignment and structure
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A* Back     alignment and structure
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A {Amycolatopsis orientalis} SCOP: a.104.1.1 Back     alignment and structure
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A* Back     alignment and structure
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.50A {Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A* 3cv9_A* Back     alignment and structure
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2, anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A {Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A* 2d0e_A* 1t93_A* 2d09_A* 3tzo_A* Back     alignment and structure
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron, metal-binding, oxidoreductase, substrate-soaking, cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB: 1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A* 2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A* 1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ... Back     alignment and structure
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron, metal-binding, oxidoreductase; HET: HEM; 1.35A {Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A* 3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A* Back     alignment and structure
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A {Pseudomonas SP} SCOP: a.104.1.1 Back     alignment and structure
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding; HET: HEM; 2.30A {Streptomyces avermitilis} Back     alignment and structure
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase, metal-binding, AN biosynthesis, TIE-ROD mechanism of action; HET: HEM; 1.59A {Saccharopolyspora erythraea} PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A* Back     alignment and structure
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes teichomyceticus} SCOP: a.104.1.0 PDB: 3o1a_A* Back     alignment and structure
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus subtilis} SCOP: a.104.1.0 PDB: 3ejd_B* 3eje_B* Back     alignment and structure
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding, oxidoreductase-antibiotic complex; HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB: 3e5j_A* 3e5k_A* 3e5l_A* Back     alignment and structure
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox oxidoreductase; HET: HEM; 1.75A {Pseudonocardia autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A* Back     alignment and structure
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET: HEM; 2.90A {Streptomyces coelicolor} PDB: 4fxb_A* Back     alignment and structure
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin, oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A* 1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A* Back     alignment and structure
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding, oxidoreductase, omega-hydroxylation, iron, heme, fatty acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium tuberculosis} PDB: 2wm4_A* Back     alignment and structure
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis; HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB: 2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A* Back     alignment and structure
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase; HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP: a.104.1.1 Back     alignment and structure
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A {Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A* Back     alignment and structure
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105, oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea recticatena} Back     alignment and structure
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A {Streptomyces natalensis} PDB: 2x9p_A* Back     alignment and structure
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM EDO; 1.37A {Citrobacter braakii} PDB: 4fmx_A* 4fyz_A* 1t2b_A* 3bdz_A* 3be0_A* Back     alignment and structure
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} Back     alignment and structure
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB: 2z3u_A* 3a1l_A* Back     alignment and structure
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide antibiotics, 12- and 14- carbon macrolactone monooxygenase, heme; HET: HEM; 1.92A {Streptomyces coelicolor} SCOP: a.104.1.1 Back     alignment and structure
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM; 1.60A {Mycobacterium tuberculosis} Back     alignment and structure
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase, metal-binding, oxidoreductase, hypothetical protein; HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB: 2uvn_A* 2whf_A* 2wh8_A* 2wgy_A* Back     alignment and structure
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A {Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A* 1pkf_A* Back     alignment and structure
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta binding protein; HET: HEM; 2.47A {Micromonospora echinospora} Back     alignment and structure
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: HEM; 1.50A {Sulfolobus solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A* 1io9_A* 1io8_A* Back     alignment and structure
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450 vancomycin, oxidoreductase; HET: HEM; 1.70A {Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A* 1lgf_A* Back     alignment and structure
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein, vancomycin biosynthes carrier protein, oxidoreductase; HET: HEM; 2.10A {Amycolatopsis balhimycina} Back     alignment and structure
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450 fold, structural genomics, PSI, protein structure initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A* 3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A* Back     alignment and structure
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus} PDB: 2rfc_A* Back     alignment and structure
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein, oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB: 3nc5_A* 3nc6_A* 3nc7_A* Back     alignment and structure
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12; 1.89A {Mycobacterium smegmatis} PDB: 3r9c_A* Back     alignment and structure
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} SCOP: a.104.1.0 PDB: 3lxi_A* Back     alignment and structure
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A {Novosphingobium aromaticivorans} PDB: 3ofu_A* Back     alignment and structure
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase, oxidoreductase; HET: HEM; 2.00A {Sphingopyxis macrogoltabida} Back     alignment and structure
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.94A {Sulfolobus tokodaii} PDB: 1ue8_A* Back     alignment and structure
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX, bioremediation, electron transport; HET: HEM; 1.49A {Rhodococcus} PDB: 2wiv_A* Back     alignment and structure
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A {Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A* Back     alignment and structure
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A {Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A* 4dnz_A* Back     alignment and structure
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent, mono-oxygenases, oxidoreductase; HET: HEM; 2.00A {Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A* Back     alignment and structure
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 228
d1po5a_ 465 a.104.1.1 (A:) Mammalian cytochrome p450 2b4 {Rabb 3e-20
d1r9oa_ 467 a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Huma 8e-20
d3czha1 463 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2 2e-19
d2ij2a1 453 a.104.1.1 (A:3-455) Cytochrome P450 bm-3 {Bacillus 4e-15
d1tqna_ 472 a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Huma 2e-13
d2ciba1 445 a.104.1.1 (A:5-449) Cytochrome p450 14 alpha-stero 5e-13
d1izoa_ 411 a.104.1.1 (A:) Cytochrome p450 152a1 (Bs-beta) {Ba 2e-08
d1n97a_ 385 a.104.1.1 (A:) Cyp175a1 {Thermus thermophilus [Tax 2e-05
d1odoa_ 401 a.104.1.1 (A:) Cyp154a1 monooxygenase {Streptomyce 2e-04
>d1po5a_ a.104.1.1 (A:) Mammalian cytochrome p450 2b4 {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 465 Back     information, alignment and structure

class: All alpha proteins
fold: Cytochrome P450
superfamily: Cytochrome P450
family: Cytochrome P450
domain: Mammalian cytochrome p450 2b4
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 86.3 bits (212), Expect = 3e-20
 Identities = 33/165 (20%), Positives = 73/165 (44%), Gaps = 8/165 (4%)

Query: 64  LPPGPAPWPIVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRLGNVHVIPVTSPEIALEF 123
           LPPGP+P P++G+L +M R K   +    L  +   ++  + LG+  V+ +   +   E 
Sbjct: 3   LPPGPSPLPVLGNLLQMDR-KGLLRSFLRLREKYG-DVFTVYLGSRPVVVLCGTDAIREA 60

Query: 124 LKVHDSVFASRPLTMGTEYLSGGFLSIAVVPWGQQWKKMRKVVASHVLHSVRLDSLLVKR 183
           L      F+ R      + +  G+  I     G++W+ +R+   + +        +  + 
Sbjct: 61  LVDQAEAFSGRGKIAVVDPIFQGYGVIF--ANGERWRALRRFSLATMRDF----GMGKRS 114

Query: 184 REEAEELVSFVYNQCIRNNVDSVINVRLVARRYCGNVIRKIMFSR 228
            EE  +  +    + +R +  ++++  L+      N+I  I+F +
Sbjct: 115 VEERIQEEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGK 159
>d1r9oa_ a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Human (Homo sapiens) [TaxId: 9606]} Length = 467 Back     information, alignment and structure
>d3czha1 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2R1 {Human (Homo sapiens) [TaxId: 9606]} Length = 463 Back     information, alignment and structure
>d2ij2a1 a.104.1.1 (A:3-455) Cytochrome P450 bm-3 {Bacillus megaterium [TaxId: 1404]} Length = 453 Back     information, alignment and structure
>d1tqna_ a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Human (Homo sapiens) [TaxId: 9606]} Length = 472 Back     information, alignment and structure
>d2ciba1 a.104.1.1 (A:5-449) Cytochrome p450 14 alpha-sterol demethylase (cyp51) {Mycobacterium tuberculosis [TaxId: 1773]} Length = 445 Back     information, alignment and structure
>d1izoa_ a.104.1.1 (A:) Cytochrome p450 152a1 (Bs-beta) {Bacillus subtilis [TaxId: 1423]} Length = 411 Back     information, alignment and structure
>d1n97a_ a.104.1.1 (A:) Cyp175a1 {Thermus thermophilus [TaxId: 274]} Length = 385 Back     information, alignment and structure
>d1odoa_ a.104.1.1 (A:) Cyp154a1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]} Length = 401 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query228
d1tqna_ 472 Mammalian cytochrome P450 3a4 {Human (Homo sapiens 99.92
d2ij2a1 453 Cytochrome P450 bm-3 {Bacillus megaterium [TaxId: 99.92
d1r9oa_ 467 Mammalian cytochrome p450 2c9 {Human (Homo sapiens 99.88
d2ciba1 445 Cytochrome p450 14 alpha-sterol demethylase (cyp51 99.86
d1po5a_ 465 Mammalian cytochrome p450 2b4 {Rabbit (Oryctolagus 99.86
d3czha1 463 Vitamin D 25-hydroxylase Cyp2R1 {Human (Homo sapie 99.86
d1n97a_ 385 Cyp175a1 {Thermus thermophilus [TaxId: 274]} 99.79
d1izoa_ 411 Cytochrome p450 152a1 (Bs-beta) {Bacillus subtilis 99.73
d1odoa_ 401 Cyp154a1 monooxygenase {Streptomyces coelicolor [T 99.56
d1z8oa1 402 Cytochrome P450-ERYF {Saccharopolyspora erythraea 99.37
d1ueda_ 403 p450 monoxygenase OxyC {Amycolatopsis orientalis [ 99.35
d1jfba_ 399 Cytochrome P450-NOR, nitric reductase {Fungus (Fus 99.33
d1s1fa_ 399 Cyp158a2 {Streptomyces coelicolor [TaxId: 1902]} 99.28
d1gwia_ 403 Cyp154c1 monooxygenase {Streptomyces coelicolor [T 99.27
d1cpta_ 428 Cytochrome P450-TERP {Pseudomonas sp. [TaxId: 306] 99.01
d1re9a_ 404 Cytochrome P450-CAM {Pseudomonas putida [TaxId: 30 99.0
d1lfka_ 394 p450 monoxygenase OxyB {Amycolatopsis orientalis [ 98.92
d1q5da_ 401 Cytochrome P450epok {Sorangium cellulosum [TaxId: 98.88
d1io7a_ 366 Cyp119 {Archaeon Sulfolobus solfataricus [TaxId: 2 98.84
d1n40a_ 395 Cyp121 monooxygenase (P450 Mt2) {Mycobacterium tub 98.7
d1ue8a_ 367 Cyp119 {Archaeon Sulfolobus tokodaii [TaxId: 11195 98.34
>d1tqna_ a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: All alpha proteins
fold: Cytochrome P450
superfamily: Cytochrome P450
family: Cytochrome P450
domain: Mammalian cytochrome P450 3a4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=8.4e-25  Score=178.80  Aligned_cols=153  Identities=17%  Similarity=0.298  Sum_probs=128.3

Q ss_pred             CCCCCCcccccccccccCCCCchHHHHHHHHHhCCceEEEEecCeeEEEEcCHHHHHHHHHhcCC-CCCCCCchhhhhhc
Q 040505           65 PPGPAPWPIVGSLPEMWRNKPTFKWIHGLMRELNTNICCIRLGNVHVIPVTSPEIALEFLKVHDS-VFASRPLTMGTEYL  143 (228)
Q Consensus        65 pPgP~~~p~~G~~~~~~~~~~~~~~~~~~~~kyG~~v~~~~~~~~~~v~i~~p~~~~~vl~~~~~-~~~~~~~~~~~~~~  143 (228)
                      +|||+++|++||++++.++  .+.++.++++|||+ ||++++++.++|+++||+++++++.++.. .+..+.........
T Consensus        11 iPGP~~~P~iG~~~~~~~~--~~~~~~~~~~kyG~-i~~~~l~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~~~~~   87 (472)
T d1tqna_          11 IPGPTPLPFLGNILSYHKG--FCMFDMECHKKYGK-VWGFYDGQQPVLAITDPDMIKTVLVKECYSVFTNRRPFGPVGFM   87 (472)
T ss_dssp             CCCCCCBTTTBTGGGGGGC--HHHHHHHHHHHHCS-EEEEEETTEEEEEECCHHHHHHHHTTTTTTTCCBCCCCSCCGGG
T ss_pred             CCCCCCcCceeEHHHhhCC--HHHHHHHHHHHhCC-EEEEEECCeeEEEECCHHHHHHHHhcCCcccccCCccccccccc
Confidence            4899999999999998653  48899999999998 99999999999999999999999976643 33333333222333


Q ss_pred             cCCccceeecCCChhHHHHHHHHHHhhhchhhhhHhHHHHHHHHHHHHHHHHHhchhCCCCccccHHHHHHHHHHHHHHH
Q 040505          144 SGGFLSIAVVPWGQQWKKMRKVVASHVLHSVRLDSLLVKRREEAEELVSFVYNQCIRNNVDSVINVRLVARRYCGNVIRK  223 (228)
Q Consensus       144 ~~~~~~~~~~~~g~~w~~~R~~~~~~f~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~d~~~~~~~~t~dii~~  223 (228)
                      +.+    ++..+|+.|+++|++++++| +.+.++.+.+.++++++++++.|.+.++.+.   .+|+.+.+.++++|+++.
T Consensus        88 ~~~----i~~~~g~~~~~~R~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~---~~dl~~~~~~~~~~v~~~  159 (472)
T d1tqna_          88 KSA----ISIAEDEEWKRLRSLLSPTF-TSGKLKEMVPIIAQYGDVLVRNLRREAETGK---PVTLKDVFGAYSMDVITS  159 (472)
T ss_dssp             GGS----TTTCCHHHHHHHHHHTTGGG-SHHHHHTTHHHHHHHHHHHHHHHHHHHHHSS---CEEHHHHHHHHHHHHHHH
T ss_pred             CCc----eeccCcHHHHHhhhhcCccc-cchhhhcccchhhhhhhcccccccccccccc---cchhhhhhhccchhhhhh
Confidence            333    56677999999999999999 8888999999999999999999988766544   899999999999999999


Q ss_pred             HHcCC
Q 040505          224 IMFSR  228 (228)
Q Consensus       224 ~~fG~  228 (228)
                      ++||.
T Consensus       160 ~~~G~  164 (472)
T d1tqna_         160 TSFGV  164 (472)
T ss_dssp             TSSCC
T ss_pred             eeccc
Confidence            99984
>d2ij2a1 a.104.1.1 (A:3-455) Cytochrome P450 bm-3 {Bacillus megaterium [TaxId: 1404]} Back     information, alignment and structure
>d1r9oa_ a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2ciba1 a.104.1.1 (A:5-449) Cytochrome p450 14 alpha-sterol demethylase (cyp51) {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1po5a_ a.104.1.1 (A:) Mammalian cytochrome p450 2b4 {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d3czha1 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2R1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1n97a_ a.104.1.1 (A:) Cyp175a1 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1izoa_ a.104.1.1 (A:) Cytochrome p450 152a1 (Bs-beta) {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1odoa_ a.104.1.1 (A:) Cyp154a1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1z8oa1 a.104.1.1 (A:3-404) Cytochrome P450-ERYF {Saccharopolyspora erythraea [TaxId: 1836]} Back     information, alignment and structure
>d1ueda_ a.104.1.1 (A:) p450 monoxygenase OxyC {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure
>d1jfba_ a.104.1.1 (A:) Cytochrome P450-NOR, nitric reductase {Fungus (Fusarium oxysporum) [TaxId: 5507]} Back     information, alignment and structure
>d1s1fa_ a.104.1.1 (A:) Cyp158a2 {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1gwia_ a.104.1.1 (A:) Cyp154c1 monooxygenase {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1cpta_ a.104.1.1 (A:) Cytochrome P450-TERP {Pseudomonas sp. [TaxId: 306]} Back     information, alignment and structure
>d1re9a_ a.104.1.1 (A:) Cytochrome P450-CAM {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1lfka_ a.104.1.1 (A:) p450 monoxygenase OxyB {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure
>d1q5da_ a.104.1.1 (A:) Cytochrome P450epok {Sorangium cellulosum [TaxId: 56]} Back     information, alignment and structure
>d1io7a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Back     information, alignment and structure
>d1n40a_ a.104.1.1 (A:) Cyp121 monooxygenase (P450 Mt2) {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1ue8a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus tokodaii [TaxId: 111955]} Back     information, alignment and structure