Citrus Sinensis ID: 040528

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80------
Protein Sequence
MANITNATSRNDCLNNNMKPGYNLATRLEVSGGQMECWNVLMELKSCSNEIVIFFINSQADIGPDCCRTGLQCSPLSDSRLKKGTY
Secondary Structure (PSIPRED)
cccccHHHHccccccccccccccHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccHccHHHHHHccHHcccccccHHHHHccccccHHHHHHHHHHHHccccEEEEEEcccccccccccccccccccccccHcccccc
Coil and Loop (DISEMBL)
manitnatsrndclnnnmkpgynLATRLEVSGGQMECWNVLMELKSCSNEIVIFFINsqadigpdccrtglqcsplsdsrlkkgty
Flexible Loop (DISEMBL)
manitnatsrndclnnnMKPGYNLATRLEVSGGQMECWNVLMELKSCSNEIVIFFINSQADIGPDCCRTglqcsplsdsrlkkgty
Low Complexity Region (SEG)
MANITNATSRNDCLNNNMKPGYNLATRLEVSGGQMECWNVLMELKSCSNEIVIFFINSQADIGPDCCRTGLQCSPLSDSRLKKGTY
Disordered region (IsUnstruct)
*******************PGYNLATRLEVSGGQMECWNVLMELKSCSNEIVIFFINSQADIGPDCCRTGLQC*************
Disordered Region (DISOPRED)
********************************GQMECWNVLMELKSCSNEIVIFFINSQADIGPDCCRTGLQCSPLSDSRL*****
Disordered Region (DISEMBL)
MANITNATSRNDCLNNNMKPGYNLATRLEVSGGQMECWNVLMELKSCSNEIVIFFINSQADIGPDCCRTGLQCSPLS*********
Disordered Region (DISPRO)
*********RNDCLNNNMKPGYNLATRLEVSGGQMECWNVLMELKSCSNEIVIFFINSQADIGPDCCRTGLQCSPLSDSRL*****
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MANITNATSRNDCLNNNMKPGYNLATRLEVSGGQMECWNVLMELKSCSNEIVIFFINSQADIGPDCCRTGLQCSPLSDSRLKKGTY
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	86	2.2.26 [Sep-21-2011]
Q9T039	127	Egg cell-secreted protein	yes	no	0.534	0.362	0.595	3e-10
Q9SJ24	125	Egg cell-secreted protein	no	no	0.523	0.36	0.608	3e-10
Q9SJ23	125	Egg cell-secreted protein	no	no	0.511	0.352	0.555	2e-08
Q9SRD8	158	Egg cell-secreted protein	no	no	0.651	0.354	0.416	8e-07

>sp|Q9T039|EC14_ARATH Egg cell-secreted protein 1.4 OS=Arabidopsis thaliana GN=EC1.4 PE=2 SV=1

 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 28/47 (59%), Positives = 36/47 (76%), Gaps = 1/47 (2%)

Query: 23 NLATRLEVSGGQMECWNVLMELKSCSNEIVIFFINSQADIGPDCCRT 69
          N+A RL+ SGG MECWN L ELKSC+NEIV+FF+N +  +G  CC +
Sbjct: 35 NIAARLQ-SGGLMECWNALYELKSCTNEIVLFFLNGETKLGVSCCES 80

Involved in the regulation of gamete interactions during the double fertilization and to prevent multiple-pollen tube attraction; mediates the redistribution of the gamete fusogen HAP2/GCS1 to the cell surface after secretion upon sperm arrival.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9SJ24|EC12_ARATH Egg cell-secreted protein 1.2 OS=Arabidopsis thaliana GN=EC1.2 PE=2 SV=1

 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 28/46 (60%), Positives = 35/46 (76%), Gaps = 1/46 (2%)

Query: 23 NLATRLEVSGGQMECWNVLMELKSCSNEIVIFFINSQADIGPDCCR 68
          N+A RL   GG MECWN L ELKSC+NEIV+FF+N +  +G DCC+
Sbjct: 33 NIAARLN-GGGLMECWNALYELKSCTNEIVLFFLNGETKLGVDCCQ 77

Involved in the regulation of gamete interactions during the double fertilization and to prevent multiple-pollen tube attraction; mediates the redistribution of the gamete fusogen HAP2/GCS1 to the cell surface after secretion upon sperm arrival.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SJ23|EC13_ARATH Egg cell-secreted protein 1.3 OS=Arabidopsis thaliana GN=EC1.3 PE=2 SV=1

 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 25/45 (55%), Positives = 33/45 (73%), Gaps = 1/45 (2%)

Query: 23 NLATRLEVSGGQMECWNVLMELKSCSNEIVIFFINSQADIGPDCC 67
          N+A RL   GG M+CW+ L ELKSC+NEIV+FF+N +  +G  CC
Sbjct: 33 NIAARL-TGGGLMQCWDALYELKSCTNEIVLFFLNGETKLGYGCC 76

Involved in the regulation of gamete interactions during the double fertilization and to prevent multiple-pollen tube attraction; mediates the redistribution of the gamete fusogen HAP2/GCS1 to the cell surface after secretion upon sperm arrival.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SRD8|EC11_ARATH Egg cell-secreted protein 1.1 OS=Arabidopsis thaliana GN=EC1.1 PE=2 SV=1

 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 4/60 (6%)

Query: 20 PGYNLATRLEVSGGQMECWNVLMELKSCSNEIVIFFINSQADIGPDCC---RT-GLQCSP 75
          P  +L  RL++      CW+ LM+L+ CS E+++FF+N +  IGP CC   RT G +C P
Sbjct: 40 PTTSLVYRLKLDEDTGYCWDSLMQLQHCSGELILFFLNGETYIGPGCCSAIRTIGRKCWP 99

Involved in the regulation of gamete interactions during the double fertilization and to prevent multiple-pollen tube attraction; mediates the redistribution of the gamete fusogen HAP2/GCS1 to the cell surface after secretion upon sperm arrival.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	86
296082551	135	unnamed protein product [Vitis vinifera]	0.732	0.466	0.615	6e-15
224060465	146	predicted protein [Populus trichocarpa]	0.709	0.417	0.593	1e-13
359482498	128	PREDICTED: uncharacterized protein LOC10	0.720	0.484	0.507	8e-13
297802032	127	hypothetical protein ARALYDRAFT_490711 [	0.523	0.354	0.630	3e-09
297825029	125	hypothetical protein ARALYDRAFT_900604 [	0.523	0.36	0.608	1e-08
116830619	128	unknown [Arabidopsis thaliana]	0.534	0.359	0.595	1e-08
15235039	127	uncharacterized protein [Arabidopsis tha	0.534	0.362	0.595	1e-08
116830473	126	unknown [Arabidopsis thaliana]	0.523	0.357	0.608	1e-08
15227092	125	uncharacterized protein [Arabidopsis tha	0.523	0.36	0.608	1e-08
255578404	136	conserved hypothetical protein [Ricinus	0.732	0.463	0.455	2e-08

>gi|296082551|emb|CBI21556.3| unnamed protein product [Vitis vinifera]

 Score = 84.7 bits (208), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 40/65 (61%), Positives = 51/65 (78%), Gaps = 2/65 (3%)

Query: 4  ITNATSRNDCLNNNMKPG-YNLATRLEVSGGQMECWNVLMELKSCSNEIVIFFINSQADI 62
          ITNA++  + L  +MKP   +L  RLE SGG +ECWN L+ELKSC+NEI++FF+N QADI
Sbjct: 17 ITNASASRE-LPMSMKPAELDLVARLETSGGLVECWNALVELKSCTNEIILFFLNGQADI 75

Query: 63 GPDCC 67
          GPDCC
Sbjct: 76 GPDCC 80

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224060465|ref|XP_002300213.1| predicted protein [Populus trichocarpa] gi|222847471|gb|EEE85018.1| predicted protein [Populus trichocarpa]

 Score = 80.5 bits (197), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 38/64 (59%), Positives = 48/64 (75%), Gaps = 3/64 (4%)

Query: 7  ATSRNDCLNNNMKPGYN-LATRLEVSGGQMECWNVLMELKSCSNEIVIFFINSQADIGPD 65
          +T+  D L N  KPG+N L+ RLE  G  +ECWN L+E+KSC+NEIV+FF+  QADIGPD
Sbjct: 22 STAARDILIN--KPGFNSLSARLEDEGSLVECWNALVEIKSCTNEIVLFFMTGQADIGPD 79

Query: 66 CCRT 69
          CCR 
Sbjct: 80 CCRA 83

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359482498|ref|XP_002274398.2| PREDICTED: uncharacterized protein LOC100260034 [Vitis vinifera] gi|147772490|emb|CAN65099.1| hypothetical protein VITISV_039724 [Vitis vinifera] gi|297743029|emb|CBI35896.3| unnamed protein product [Vitis vinifera]

 Score = 77.8 bits (190), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 33/65 (50%), Positives = 46/65 (70%), Gaps = 3/65 (4%)

Query: 4  ITNATSRNDCLNNNMKPGYNLATRLEVSGGQMECWNVLMELKSCSNEIVIFFINSQADIG 63
          + NA +  D   N   PG +L TRLE SGG +ECWN LME++ C+NEI++FF+N Q  +G
Sbjct: 16 MANAAATRDLPTN---PGLDLTTRLETSGGLVECWNALMEIRQCTNEIILFFLNGQTVLG 72

Query: 64 PDCCR 68
          P+CC+
Sbjct: 73 PECCQ 77

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297802032|ref|XP_002868900.1| hypothetical protein ARALYDRAFT_490711 [Arabidopsis lyrata subsp. lyrata] gi|297314736|gb|EFH45159.1| hypothetical protein ARALYDRAFT_490711 [Arabidopsis lyrata subsp. lyrata]

 Score = 65.9 bits (159), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 29/46 (63%), Positives = 36/46 (78%), Gaps = 1/46 (2%)

Query: 23 NLATRLEVSGGQMECWNVLMELKSCSNEIVIFFINSQADIGPDCCR 68
          N+A RL+ SGG MECWNVL ELKSC+NEIV+FF+N +  +G  CC 
Sbjct: 35 NIAARLQ-SGGLMECWNVLYELKSCTNEIVLFFLNGETKLGVSCCE 79

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297825029|ref|XP_002880397.1| hypothetical protein ARALYDRAFT_900604 [Arabidopsis lyrata subsp. lyrata] gi|297326236|gb|EFH56656.1| hypothetical protein ARALYDRAFT_900604 [Arabidopsis lyrata subsp. lyrata]

 Score = 63.9 bits (154), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/46 (60%), Positives = 35/46 (76%), Gaps = 1/46 (2%)

Query: 23 NLATRLEVSGGQMECWNVLMELKSCSNEIVIFFINSQADIGPDCCR 68
          N+A RL   GG MECWN L ELKSC+NEIV+FF+N +  +G DCC+
Sbjct: 33 NIAARLN-GGGLMECWNALYELKSCTNEIVLFFLNGETKLGVDCCQ 77

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|116830619|gb|ABK28267.1| unknown [Arabidopsis thaliana]

 Score = 63.9 bits (154), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/47 (59%), Positives = 36/47 (76%), Gaps = 1/47 (2%)

Query: 23 NLATRLEVSGGQMECWNVLMELKSCSNEIVIFFINSQADIGPDCCRT 69
          N+A RL+ SGG MECWN L ELKSC+NEIV+FF+N +  +G  CC +
Sbjct: 35 NIAARLQ-SGGLMECWNALYELKSCTNEIVLFFLNGETKLGVSCCES 80

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15235039|ref|NP_195644.1| uncharacterized protein [Arabidopsis thaliana] gi|75213705|sp|Q9T039.1|EC14_ARATH RecName: Full=Egg cell-secreted protein 1.4; Flags: Precursor gi|4914446|emb|CAB43649.1| hypothetical protein [Arabidopsis thaliana] gi|7270918|emb|CAB80597.1| hypothetical protein [Arabidopsis thaliana] gi|91805627|gb|ABE65542.1| hypothetical protein At4g39340 [Arabidopsis thaliana] gi|332661658|gb|AEE87058.1| uncharacterized protein [Arabidopsis thaliana]

 Score = 63.9 bits (154), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/47 (59%), Positives = 36/47 (76%), Gaps = 1/47 (2%)

Query: 23 NLATRLEVSGGQMECWNVLMELKSCSNEIVIFFINSQADIGPDCCRT 69
          N+A RL+ SGG MECWN L ELKSC+NEIV+FF+N +  +G  CC +
Sbjct: 35 NIAARLQ-SGGLMECWNALYELKSCTNEIVLFFLNGETKLGVSCCES 80

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|116830473|gb|ABK28194.1| unknown [Arabidopsis thaliana]

 Score = 63.9 bits (154), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/46 (60%), Positives = 35/46 (76%), Gaps = 1/46 (2%)

Query: 23 NLATRLEVSGGQMECWNVLMELKSCSNEIVIFFINSQADIGPDCCR 68
          N+A RL   GG MECWN L ELKSC+NEIV+FF+N +  +G DCC+
Sbjct: 33 NIAARLN-GGGLMECWNALYELKSCTNEIVLFFLNGETKLGVDCCQ 77

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15227092|ref|NP_179766.1| uncharacterized protein [Arabidopsis thaliana] gi|75206217|sp|Q9SJ24.1|EC12_ARATH RecName: Full=Egg cell-secreted protein 1.2; Flags: Precursor gi|4417269|gb|AAD20394.1| hypothetical protein [Arabidopsis thaliana] gi|91805455|gb|ABE65456.1| hypothetical protein At2g21740 [Arabidopsis thaliana] gi|330252124|gb|AEC07218.1| uncharacterized protein [Arabidopsis thaliana]

 Score = 63.9 bits (154), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 28/46 (60%), Positives = 35/46 (76%), Gaps = 1/46 (2%)

Query: 23 NLATRLEVSGGQMECWNVLMELKSCSNEIVIFFINSQADIGPDCCR 68
          N+A RL   GG MECWN L ELKSC+NEIV+FF+N +  +G DCC+
Sbjct: 33 NIAARLN-GGGLMECWNALYELKSCTNEIVLFFLNGETKLGVDCCQ 77

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255578404|ref|XP_002530067.1| conserved hypothetical protein [Ricinus communis] gi|223530420|gb|EEF32307.1| conserved hypothetical protein [Ricinus communis]

 Score = 63.5 bits (153), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 31/68 (45%), Positives = 43/68 (63%), Gaps = 5/68 (7%)

Query: 4  ITNATSRNDCLNNNMKPGYNLATRLEVSGGQ--MECWNVLMELKSCSNEIVIFFINSQAD 61
          I +AT+  D        G +L  R+E S     ++CWN L+E+KSCSNEI++FF+N   D
Sbjct: 16 IASATAARDV---PFISGNSLEARIEGSSSSSLVDCWNALIEIKSCSNEIILFFLNGHTD 72

Query: 62 IGPDCCRT 69
          IG DCCR+
Sbjct: 73 IGADCCRS 80

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	86
TAIR|locus:2052536	125	EC1.2 "AT2G21740" [Arabidopsis	0.523	0.36	0.608	5e-12
TAIR|locus:2136293	127	EC1.4 "AT4G39340" [Arabidopsis	0.534	0.362	0.595	5e-12
TAIR|locus:2052556	125	EC1.3 "AT2G21750" [Arabidopsis	0.511	0.352	0.555	3.2e-10
TAIR|locus:2030136	158	EC1.1 "AT1G76750" [Arabidopsis	0.651	0.354	0.416	3.3e-08
TAIR|locus:2176080	155	EC1.5 "AT5G64720" [Arabidopsis	0.511	0.283	0.403	5e-05

TAIR|locus:2052536 EC1.2 "AT2G21740" [Arabidopsis thaliana (taxid:3702)]

 Score = 162 (62.1 bits), Expect = 5.0e-12, P = 5.0e-12
 Identities = 28/46 (60%), Positives = 35/46 (76%)

Query:    23 NLATRLEVSGGQMECWNVLMELKSCSNEIVIFFINSQADIGPDCCR 68
             N+A RL   GG MECWN L ELKSC+NEIV+FF+N +  +G DCC+
Sbjct:    33 NIAARLN-GGGLMECWNALYELKSCTNEIVLFFLNGETKLGVDCCQ 77

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IDA

GO:0009567 "double fertilization forming a zygote and endosperm" evidence=IGI

GO:0031982 "vesicle" evidence=IDA

GO:0080155 "regulation of double fertilization forming a zygote and endosperm" evidence=IMP

GO:2000008 "regulation of protein localization to cell surface" evidence=IMP

TAIR|locus:2136293 EC1.4 "AT4G39340" [Arabidopsis thaliana (taxid:3702)]

 Score = 162 (62.1 bits), Expect = 5.0e-12, P = 5.0e-12
 Identities = 28/47 (59%), Positives = 36/47 (76%)

Query:    23 NLATRLEVSGGQMECWNVLMELKSCSNEIVIFFINSQADIGPDCCRT 69
             N+A RL+ SGG MECWN L ELKSC+NEIV+FF+N +  +G  CC +
Sbjct:    35 NIAARLQ-SGGLMECWNALYELKSCTNEIVLFFLNGETKLGVSCCES 80

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IDA

GO:0009567 "double fertilization forming a zygote and endosperm" evidence=IGI

GO:0031982 "vesicle" evidence=IDA

GO:0080155 "regulation of double fertilization forming a zygote and endosperm" evidence=IMP

GO:2000008 "regulation of protein localization to cell surface" evidence=IMP

TAIR|locus:2052556 EC1.3 "AT2G21750" [Arabidopsis thaliana (taxid:3702)]

 Score = 145 (56.1 bits), Expect = 3.2e-10, P = 3.2e-10
 Identities = 25/45 (55%), Positives = 33/45 (73%)

Query:    23 NLATRLEVSGGQMECWNVLMELKSCSNEIVIFFINSQADIGPDCC 67
             N+A RL   GG M+CW+ L ELKSC+NEIV+FF+N +  +G  CC
Sbjct:    33 NIAARL-TGGGLMQCWDALYELKSCTNEIVLFFLNGETKLGYGCC 76

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IDA

GO:0009567 "double fertilization forming a zygote and endosperm" evidence=IGI

GO:0031982 "vesicle" evidence=IDA

GO:0080155 "regulation of double fertilization forming a zygote and endosperm" evidence=IMP

GO:2000008 "regulation of protein localization to cell surface" evidence=IMP

TAIR|locus:2030136 EC1.1 "AT1G76750" [Arabidopsis thaliana (taxid:3702)]

 Score = 126 (49.4 bits), Expect = 3.3e-08, P = 3.3e-08
 Identities = 25/60 (41%), Positives = 37/60 (61%)

Query:    20 PGYNLATRLEVSGGQMECWNVLMELKSCSNEIVIFFINSQADIGPDCC---RT-GLQCSP 75
             P  +L  RL++      CW+ LM+L+ CS E+++FF+N +  IGP CC   RT G +C P
Sbjct:    40 PTTSLVYRLKLDEDTGYCWDSLMQLQHCSGELILFFLNGETYIGPGCCSAIRTIGRKCWP 99

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IDA

GO:0005622 "intracellular" evidence=IDA

GO:0009567 "double fertilization forming a zygote and endosperm" evidence=IGI

GO:0031982 "vesicle" evidence=IDA

GO:0048240 "sperm capacitation" evidence=IDA

GO:0080155 "regulation of double fertilization forming a zygote and endosperm" evidence=IMP

GO:2000008 "regulation of protein localization to cell surface" evidence=IMP

TAIR|locus:2176080 EC1.5 "AT5G64720" [Arabidopsis thaliana (taxid:3702)]

 Score = 96 (38.9 bits), Expect = 5.0e-05, P = 5.0e-05
 Identities = 21/52 (40%), Positives = 30/52 (57%)

Query:    24 LATRLEVSGGQMECWNVLMELKSCSNEIVIFFINS--------QADIGPDCC 67
             +AT    +G  M+CWN  +ELKSC++EIV FF++         +  I  DCC
Sbjct:    40 MATDHSGAGNLMDCWNAGLELKSCTDEIVKFFLSQTGTSEPPVKGGIDKDCC 91


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.132   0.412    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       86        86   0.00091  102 3  11 22  0.46    29
                                                     29  0.47    30


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  547 (58 KB)
  Total size of DFA:  112 KB (2075 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  9.16u 0.12s 9.28t   Elapsed:  00:00:01
  Total cpu time:  9.16u 0.12s 9.28t   Elapsed:  00:00:01
  Start:  Fri May 10 23:26:17 2013   End:  Fri May 10 23:26:18 2013

GO:0003674 "molecular_function" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0005576 "extracellular region" evidence=IDA

GO:0009567 "double fertilization forming a zygote and endosperm" evidence=IGI

GO:0031982 "vesicle" evidence=IDA

GO:0080155 "regulation of double fertilization forming a zygote and endosperm" evidence=IMP

GO:2000008 "regulation of protein localization to cell surface" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	86
pfam05617	67	pfam05617, Prolamin_like, Prolamin-like	2e-04

>gnl|CDD|218659 pfam05617, Prolamin_like, Prolamin-like

 Score = 35.6 bits (82), Expect = 2e-04
 Identities = 10/34 (29%), Positives = 19/34 (55%), Gaps = 1/34 (2%)

Query: 36 ECWNVLME-LKSCSNEIVIFFINSQADIGPDCCR 68
          +CW+     +  C +EI      ++ ++GPDCC+
Sbjct: 1  KCWSACAVKIPGCVDEIFASIFGNKGNLGPDCCQ 34

Both DUF784 and DUF1278 members are found to be expressed in the plant embryo sac and are regulated by the Myb98 transcription factor. Computational analysis has revealed that they are homologous to the plant prolamin superfamily (Protease inhibitor-seed storage-LTP family, pfam00234). In contrast to the typical prolamin members that have eight conserved Cys residues forming four pairs of disulfide bonds, both DUF784 and DUF1278 domains only contain six conserved Cys residues that may form three pairs of disulfide bonds. These two domains may have potential functions in lipid transfer or protection during plant embryo sac development and reproduction. This family has been merged with the DUF1278 family. Length = 67

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	86
PLN00213	118	predicted protein; Provisional	99.74
PF05617	70	Prolamin_like: Prolamin-like; InterPro: IPR008502	99.51

>PLN00213 predicted protein; Provisional

Probab=99.74  E-value=4.1e-19  Score=125.65  Aligned_cols=53  Identities=21%  Similarity=0.533  Sum_probs=47.0

Q ss_pred             hhhccCcchhhhhhhhcccchHHHHHHHHHhccc-ccCcccccC---CCCCchhhhhc
Q 040528           27 RLEVSGGQMECWNVLMELKSCSNEIVIFFINSQA-DIGPDCCRT---GLQCSPLSDSR   80 (86)
Q Consensus        27 rL~~~~~~~~CW~sL~~l~sCt~EIv~fflnGe~-~iGp~CC~A---~~~CWP~Mf~s   80 (86)
                      ++.+.+++.+||+||++++||+.||.+++++||+ +||++||||   .++|||+| |.
T Consensus        38 ~~pg~pd~~kCwSSl~~vpGCv~EI~~si~~gkf~~Ig~aCCKAf~~~dnCwP~~-P~   94 (118)
T PLN00213         38 LIPGLPDITKCFSSVMDIPGCIAEISQSIFTGKFGNLGPACCKAFLDADNCIPKI-PF   94 (118)
T ss_pred             CCCCCccHHHHHHHHcCCcchHHHHHHHHHhchhcccchHHHHHHHhhhccccCC-cC
Confidence            3444568889999999999999999999999999 999999999   55999996 53

>PF05617 Prolamin_like: Prolamin-like; InterPro: IPR008502 This entry consists of several proteins of unknown function found exclusively in Arabidopsis thaliana

Probab=99.51  E-value=3.8e-15  Score=91.87  Aligned_cols=46  Identities=30%  Similarity=0.751  Sum_probs=42.3

Q ss_pred             hhhhhhhcccchHHHHHHHHHhcc-cccCcccccC----CCCCchhhhhcc
Q 040528           36 ECWNVLMELKSCSNEIVIFFINSQ-ADIGPDCCRT----GLQCSPLSDSRL   81 (86)
Q Consensus        36 ~CW~sL~~l~sCt~EIv~fflnGe-~~iGp~CC~A----~~~CWP~Mf~sl   81 (86)
                      +||+++.++++|+.||+.+|++|+ .+||++||+|    +++|||.|+..+
T Consensus         1 kc~~~~~~~~~C~~eI~~~~~~g~~~~i~~~CC~~i~~~g~~C~~~l~~~~   51 (70)
T PF05617_consen    1 KCLSSCAKSPGCGDEIFNSFFNGNKKNIGPECCKAINKMGKDCHPALFKMF   51 (70)
T ss_pred             ChHHHcCCccchHHHHHHHHHcCCCCCCChHHHHHHHHHhHhHHHHHHHHc
Confidence            699999999999999999999999 6999999999    999999955444

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00