Citrus Sinensis ID: 040529
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 806 | 2.2.26 [Sep-21-2011] | |||||||
| Q8LEV3 | 809 | BTB/POZ domain-containing | yes | no | 0.997 | 0.993 | 0.681 | 0.0 | |
| Q8VCK5 | 604 | Kelch-like protein 20 OS= | yes | no | 0.326 | 0.435 | 0.245 | 1e-12 | |
| D3Z8N4 | 609 | Kelch-like protein 20 OS= | yes | no | 0.326 | 0.431 | 0.245 | 1e-12 | |
| Q9Y2M5 | 609 | Kelch-like protein 20 OS= | yes | no | 0.326 | 0.431 | 0.245 | 1e-12 | |
| Q08DK3 | 609 | Kelch-like protein 20 OS= | yes | no | 0.326 | 0.431 | 0.245 | 1e-12 | |
| Q6DFF6 | 604 | Kelch-like protein 20 OS= | N/A | no | 0.326 | 0.435 | 0.245 | 2e-12 | |
| Q5R7B8 | 609 | Kelch-like protein 20 OS= | yes | no | 0.326 | 0.431 | 0.245 | 2e-12 | |
| Q5ZKD9 | 610 | Kelch-like protein 20 OS= | yes | no | 0.300 | 0.396 | 0.232 | 3e-12 | |
| B3NDN0 | 623 | Kelch-like protein diablo | N/A | no | 0.282 | 0.365 | 0.273 | 6e-12 | |
| B4PD06 | 623 | Kelch-like protein diablo | N/A | no | 0.282 | 0.365 | 0.273 | 7e-12 |
| >sp|Q8LEV3|Y2060_ARATH BTB/POZ domain-containing protein At2g30600 OS=Arabidopsis thaliana GN=At2g30600/At2g30610 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 1164 bits (3010), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 551/809 (68%), Positives = 657/809 (81%), Gaps = 5/809 (0%)
Query: 1 MAEKKEKKFLTVAPFECAWRKDLKFREAGRGCVAFEAFAHNDVTVVFRENVGSQHYHYKR 60
M KE KFLTVAPFECAW DLKFREAGRGCVAF+AFAHNDVTVVFRENVG+QHYHYK+
Sbjct: 1 MVAAKENKFLTVAPFECAWSDDLKFREAGRGCVAFDAFAHNDVTVVFRENVGTQHYHYKK 60
Query: 61 DNSPHYTVIIGSNRNRRLKIEVNGKTVVDVAGVGLC-CSSAFQSYWISIYDGLISIGKGR 119
DNSPHY VIIGSNRNRRLKI+V+GK+VVD LC CS FQSYWISIYDGLISIGKGR
Sbjct: 61 DNSPHYIVIIGSNRNRRLKIQVDGKSVVDEEASDLCRCSLEFQSYWISIYDGLISIGKGR 120
Query: 120 YPFQNLVFQWLDSSPNCSVRYVGLSSWDKHVGYRNVNVLPLTQNHIMLWKHVDCDKYEEE 179
YPFQNLVF+W D PNC+V+YVGLSSWDKHVGYRNV+V P+T NHI+LWK VDC + +
Sbjct: 121 YPFQNLVFKWQDPKPNCNVQYVGLSSWDKHVGYRNVSVFPVTHNHILLWKQVDCREVRGD 180
Query: 180 EDGDVEMMIDERTGY--EKWGLENFFESWELSDMFFIVGTEEKLVPAHKVILQASGNFPL 237
E GD E +++E TGY E+WGL NF ESW+LSD F+VG EE VPAHKVILQASGNFPL
Sbjct: 181 ESGD-EKVVEEGTGYDYEQWGLGNFLESWQLSDTVFLVGEEEMDVPAHKVILQASGNFPL 239
Query: 238 SLTGEGIVQLQEVIYPILHALLQFIYTGRTQISEPLLGPLWALSSQFQVMPLVKQCEETM 297
+ ++QL+ V YPILHALLQ+IYTGRTQI E L PL LSS+F+VM LV+QCEE++
Sbjct: 240 RSSDGDVIQLRGVSYPILHALLQYIYTGRTQILESELAPLRDLSSKFEVMSLVRQCEESI 299
Query: 298 ERFKLNKKLFDLGKNVELSYPSSRPHCT-VFPFGLPINSQRLKQLASNCEYADVNIYVES 356
+ FKL+K FD + V+L P S P +FP P++ +L +L S EY+D+ IY+
Sbjct: 300 DHFKLSKTAFDSCRKVKLLCPISHPLSGFMFPSAFPVDVGKLVKLYSTGEYSDIKIYLSD 359
Query: 357 HGLVAQSHKIILSLWSVPFAKMFTNGMSESYSSDVHLRDVSLKAFKIMLEFMYSGELNIE 416
H L QSHK+ILSLWSV FAKMFTNGMSES+SS ++L DVS +AFK M+ FMYSGELN+E
Sbjct: 360 HSLTFQSHKVILSLWSVAFAKMFTNGMSESHSSTIYLTDVSPEAFKAMMNFMYSGELNME 419
Query: 417 DSLDFGSLLLQLLILSDQFGVTLLHQECCKLLLECFSEDSVCPILQVVTPISSCKLIEET 476
D+++FG+ L+ LL L+D+FGV LHQECCK+LLEC SEDSVC +LQVV+ ISSCKLIEE
Sbjct: 420 DTVNFGTELIHLLFLADRFGVVPLHQECCKMLLECLSEDSVCSVLQVVSSISSCKLIEEM 479
Query: 477 CERKFALHFDYCTTASLDFVFLDEATFSSIIRHPDLTVTSEERVLNAILMWGMKAKELCG 536
C+RKF++HFDYCTTASLDFV LD+ TFS I+ DLTVTSEE++LNA+LMW MKA+E
Sbjct: 480 CKRKFSMHFDYCTTASLDFVLLDQTTFSDILESADLTVTSEEKILNAVLMWCMKAEESHS 539
Query: 537 WEEMDELIIKLTPELVFEERLQSVNYLLPFVRFPLLPHALLKKMENSCLNRQIPIFDNLV 596
W +DE++ P+ +F+ERLQS++ LLP VRF LLP+ LLK++ENS L+++IP+F+ L+
Sbjct: 540 WGVIDEMMNYADPKSLFKERLQSLDDLLPHVRFSLLPYELLKRLENSNLSKEIPVFNRLL 599
Query: 597 KEAIIFIESGLAVPGSNQSVRFQHRRSSFKELQYICDGDSNGVLYFAGTSYGEHPWVNPV 656
KEA F+ SGL PG+ RFQHRRSSFKELQYI DGDSNGVL+F GTSYG H WVNPV
Sbjct: 600 KEAASFLTSGLISPGNEPISRFQHRRSSFKELQYIRDGDSNGVLHFVGTSYGSHQWVNPV 659
Query: 657 LAKRINITASSPISRYTDPKALASRTYQGLSFAGPRMEDGHNCTWWMVDIGQDHQLMCNY 716
LAK+INIT+SSP SR+TDPKALAS+ Y G SFAGPRMEDGH +WW+VD+G++HQLMCNY
Sbjct: 660 LAKKINITSSSPTSRFTDPKALASKAYAGTSFAGPRMEDGHISSWWVVDLGEEHQLMCNY 719
Query: 717 YTLRMDGSRAYIRYWNFQGSMDGKSWTNLRVHENDQTMCKHGQFASWAVIGPNALRPFRF 776
YT R DGSRA+ R+W FQGSMDGK+WT+LRVHE+DQTMCK GQFASW + NAL PFRF
Sbjct: 720 YTFRQDGSRAFTRFWKFQGSMDGKTWTDLRVHEDDQTMCKAGQFASWPITAANALLPFRF 779
Query: 777 FRVVLMGPTADAANSWNFCICFLELYGYF 805
FR+VL GPTAD + WNFCIC+LELYGYF
Sbjct: 780 FRLVLTGPTADTSTPWNFCICYLELYGYF 808
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May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins. Arabidopsis thaliana (taxid: 3702) |
| >sp|Q8VCK5|KLH20_MOUSE Kelch-like protein 20 OS=Mus musculus GN=Klhl20 PE=2 SV=2 | Back alignment and function description |
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| >sp|D3Z8N4|KLH20_RAT Kelch-like protein 20 OS=Rattus norvegicus GN=Klhl20 PE=3 SV=1 | Back alignment and function description |
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| >sp|Q9Y2M5|KLH20_HUMAN Kelch-like protein 20 OS=Homo sapiens GN=KLHL20 PE=1 SV=4 | Back alignment and function description |
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| >sp|Q08DK3|KLH20_BOVIN Kelch-like protein 20 OS=Bos taurus GN=KLHL20 PE=2 SV=3 | Back alignment and function description |
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| >sp|Q6DFF6|KLH20_XENLA Kelch-like protein 20 OS=Xenopus laevis GN=klhl20 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q5R7B8|KLH20_PONAB Kelch-like protein 20 OS=Pongo abelii GN=KLHL20 PE=2 SV=3 | Back alignment and function description |
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| >sp|Q5ZKD9|KLH20_CHICK Kelch-like protein 20 OS=Gallus gallus GN=KLHL20 PE=2 SV=1 | Back alignment and function description |
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| >sp|B3NDN0|KLHDB_DROER Kelch-like protein diablo OS=Drosophila erecta GN=dbo PE=3 SV=1 | Back alignment and function description |
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| >sp|B4PD06|KLHDB_DROYA Kelch-like protein diablo OS=Drosophila yakuba GN=dbo PE=3 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 806 | ||||||
| 224086040 | 806 | predicted protein [Populus trichocarpa] | 0.998 | 0.998 | 0.771 | 0.0 | |
| 297745547 | 789 | unnamed protein product [Vitis vinifera] | 0.977 | 0.998 | 0.765 | 0.0 | |
| 225457542 | 806 | PREDICTED: BTB/POZ domain-containing pro | 0.998 | 0.998 | 0.770 | 0.0 | |
| 224061877 | 801 | predicted protein [Populus trichocarpa] | 0.990 | 0.996 | 0.749 | 0.0 | |
| 255539218 | 806 | protein binding protein, putative [Ricin | 0.997 | 0.997 | 0.746 | 0.0 | |
| 449455597 | 806 | PREDICTED: BTB/POZ domain-containing pro | 0.993 | 0.993 | 0.707 | 0.0 | |
| 297822777 | 809 | BTB/POZ domain-containing protein [Arabi | 0.997 | 0.993 | 0.686 | 0.0 | |
| 30684653 | 809 | BTB/POZ domain-containing protein [Arabi | 0.997 | 0.993 | 0.681 | 0.0 | |
| 62319919 | 812 | hypothetical protein [Arabidopsis thalia | 0.992 | 0.985 | 0.681 | 0.0 | |
| 334184586 | 855 | BTB/POZ domain-containing protein [Arabi | 0.997 | 0.940 | 0.644 | 0.0 |
| >gi|224086040|ref|XP_002307790.1| predicted protein [Populus trichocarpa] gi|222857239|gb|EEE94786.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1295 bits (3351), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 623/807 (77%), Positives = 701/807 (86%), Gaps = 2/807 (0%)
Query: 1 MAEKKEKKFLTVAPFECAWRKDLKFREAGRGCVAFEAFAHNDVTVVFRENVGSQHYHYKR 60
M E+KEKKFLTVAPF+CAWRKDLKFREAGRGCVAF+AFAHNDVTVVFRENVGSQHYHYKR
Sbjct: 1 MIEEKEKKFLTVAPFQCAWRKDLKFREAGRGCVAFDAFAHNDVTVVFRENVGSQHYHYKR 60
Query: 61 DNSPHYTVIIGSNRNRRLKIEVNGKTVVDVAGVGLCCSSAFQSYWISIYDGLISIGKGRY 120
DNSPHYTVI+GS+RNRRLKIEV+GKTVVD GV LCCSS FQSYWISIYDGLIS+GKGRY
Sbjct: 61 DNSPHYTVILGSHRNRRLKIEVDGKTVVDEEGVALCCSSMFQSYWISIYDGLISVGKGRY 120
Query: 121 PFQNLVFQWLDSSPNCSVRYVGLSSWDKHVGYRNVNVLPLTQNHIMLWKHVDCDKYEEEE 180
PFQNLVFQWLDS+PNCSVRYVGLSSWDKHVGYRNVNVLPL +NH++LWK VD +YE +
Sbjct: 121 PFQNLVFQWLDSNPNCSVRYVGLSSWDKHVGYRNVNVLPLPKNHMLLWKQVDSGEYEGTD 180
Query: 181 DGDVEMMIDERTGYEKWGLENFFESWELSDMFFIVGTEEKLVPAHKVILQASGNFPLSLT 240
DG+ E+ + + YE+ GLENF ESWELSD+ FIVG EE+LVPAHKVILQASGNFPLS +
Sbjct: 181 DGEEELEGGQMS-YERRGLENFLESWELSDVLFIVGKEERLVPAHKVILQASGNFPLSSS 239
Query: 241 GEGIVQLQEVIYPILHALLQFIYTGRTQISEPLLGPLWALSSQFQVMPLVKQCEETMERF 300
E ++QLQ+ YPILHALLQ+IYTG TQISE LG LWALS QF+VMPL K CEE +ERF
Sbjct: 240 NEDVIQLQDATYPILHALLQYIYTGHTQISESQLGSLWALSLQFEVMPLGKFCEEIVERF 299
Query: 301 KLNKKLFDLGKNVELSYPSSRPHCTV-FPFGLPINSQRLKQLASNCEYADVNIYVESHGL 359
KLNKKLFD GKNVELSYPSS+PHC + FP LPIN QRLKQL S +Y+D+NIY+E HGL
Sbjct: 300 KLNKKLFDSGKNVELSYPSSQPHCCMAFPSQLPINVQRLKQLQSTGDYSDINIYIEGHGL 359
Query: 360 VAQSHKIILSLWSVPFAKMFTNGMSESYSSDVHLRDVSLKAFKIMLEFMYSGELNIEDSL 419
VAQ HK+ILSLWSVPF+KMFTNGMSES SS+V LRDVS +AFK+MLEFMYSGEL++EDS+
Sbjct: 360 VAQPHKVILSLWSVPFSKMFTNGMSESRSSEVFLRDVSPEAFKVMLEFMYSGELSLEDSV 419
Query: 420 DFGSLLLQLLILSDQFGVTLLHQECCKLLLECFSEDSVCPILQVVTPISSCKLIEETCER 479
+FG+LLLQ L+L+DQFGVTLL+QECCK LLEC SEDSV PILQ V+ I SCKLIEETCER
Sbjct: 420 EFGTLLLQALLLADQFGVTLLYQECCKTLLECLSEDSVGPILQAVSLIPSCKLIEETCER 479
Query: 480 KFALHFDYCTTASLDFVFLDEATFSSIIRHPDLTVTSEERVLNAILMWGMKAKELCGWEE 539
KFA+HFDYCTT SLDF+ LDE FS+II+H DLTVTSEERVLNAI MW M+ KELCGWE
Sbjct: 480 KFAMHFDYCTTTSLDFILLDETNFSNIIQHQDLTVTSEERVLNAIFMWCMRDKELCGWEV 539
Query: 540 MDELIIKLTPELVFEERLQSVNYLLPFVRFPLLPHALLKKMENSCLNRQIPIFDNLVKEA 599
+ EL+ TP+L+F +RLQS+N LLPFVRFPL+P+ LLKK+ S + R +PIFD+LV+E
Sbjct: 540 VAELLALSTPDLLFRDRLQSLNNLLPFVRFPLMPYDLLKKLGQSNIRRHVPIFDDLVREG 599
Query: 600 IIFIESGLAVPGSNQSVRFQHRRSSFKELQYICDGDSNGVLYFAGTSYGEHPWVNPVLAK 659
I + E G PG++Q+ RFQHRRSSFKELQYICDGDSNGVLYFAGTSYGEH W+NPVLAK
Sbjct: 600 ICYAEFGSLRPGNDQNPRFQHRRSSFKELQYICDGDSNGVLYFAGTSYGEHQWINPVLAK 659
Query: 660 RINITASSPISRYTDPKALASRTYQGLSFAGPRMEDGHNCTWWMVDIGQDHQLMCNYYTL 719
RI ITASSP SRYTDPK L SRTYQG SFAGP MEDGH WWMVDIGQDHQLMCN+YTL
Sbjct: 660 RITITASSPPSRYTDPKTLVSRTYQGTSFAGPCMEDGHIRAWWMVDIGQDHQLMCNHYTL 719
Query: 720 RMDGSRAYIRYWNFQGSMDGKSWTNLRVHENDQTMCKHGQFASWAVIGPNALRPFRFFRV 779
R DGSRA+IR+WN QGS+DGK+WTNLRVHENDQTMCK QFASW + GP+AL PFRFFRV
Sbjct: 720 RQDGSRAFIRFWNLQGSLDGKTWTNLRVHENDQTMCKADQFASWPITGPHALLPFRFFRV 779
Query: 780 VLMGPTADAANSWNFCICFLELYGYFH 806
VL GPT DA+N N CICFLELYGYFH
Sbjct: 780 VLTGPTTDASNPHNLCICFLELYGYFH 806
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297745547|emb|CBI40712.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|225457542|ref|XP_002270675.1| PREDICTED: BTB/POZ domain-containing protein At2g30600 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|224061877|ref|XP_002300643.1| predicted protein [Populus trichocarpa] gi|222842369|gb|EEE79916.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|255539218|ref|XP_002510674.1| protein binding protein, putative [Ricinus communis] gi|223551375|gb|EEF52861.1| protein binding protein, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|449455597|ref|XP_004145539.1| PREDICTED: BTB/POZ domain-containing protein At2g30600-like [Cucumis sativus] gi|449512669|ref|XP_004164111.1| PREDICTED: BTB/POZ domain-containing protein At2g30600-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|297822777|ref|XP_002879271.1| BTB/POZ domain-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297325110|gb|EFH55530.1| BTB/POZ domain-containing protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
| >gi|30684653|ref|NP_180618.2| BTB/POZ domain-containing protein [Arabidopsis thaliana] gi|30684657|ref|NP_850151.1| BTB/POZ domain-containing protein [Arabidopsis thaliana] gi|79323512|ref|NP_001031447.1| BTB/POZ domain-containing protein [Arabidopsis thaliana] gi|79323521|ref|NP_001031448.1| BTB/POZ domain-containing protein [Arabidopsis thaliana] gi|75246041|sp|Q8LEV3.1|Y2060_ARATH RecName: Full=BTB/POZ domain-containing protein At2g30600 gi|21553356|gb|AAM62449.1| unknown [Arabidopsis thaliana] gi|51968452|dbj|BAD42918.1| unknown protein [Arabidopsis thaliana] gi|51970296|dbj|BAD43840.1| unknown protein [Arabidopsis thaliana] gi|51971230|dbj|BAD44307.1| unknown protein [Arabidopsis thaliana] gi|330253319|gb|AEC08413.1| BTB/POZ domain-containing protein [Arabidopsis thaliana] gi|330253320|gb|AEC08414.1| BTB/POZ domain-containing protein [Arabidopsis thaliana] gi|330253321|gb|AEC08415.1| BTB/POZ domain-containing protein [Arabidopsis thaliana] gi|330253322|gb|AEC08416.1| BTB/POZ domain-containing protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|62319919|dbj|BAD93995.1| hypothetical protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|334184586|ref|NP_001189642.1| BTB/POZ domain-containing protein [Arabidopsis thaliana] gi|330253323|gb|AEC08417.1| BTB/POZ domain-containing protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 806 | ||||||
| DICTYBASE|DDB_G0283263 | 863 | migA "coagulation factor 5/8 t | 0.214 | 0.200 | 0.298 | 6.3e-17 | |
| WB|WBGene00016405 | 2761 | hecd-1 [Caenorhabditis elegans | 0.209 | 0.061 | 0.322 | 3.8e-14 | |
| UNIPROTKB|Q18447 | 2761 | hecd-1 "Protein HECD-1" [Caeno | 0.209 | 0.061 | 0.322 | 3.8e-14 | |
| DICTYBASE|DDB_G0291147 | 938 | DDB_G0291147 [Dictyostelium di | 0.199 | 0.171 | 0.337 | 2.8e-12 | |
| UNIPROTKB|Q5ZKD9 | 610 | KLHL20 "Kelch-like protein 20" | 0.261 | 0.345 | 0.244 | 1.3e-09 | |
| UNIPROTKB|H0YJP0 | 1465 | HECTD1 "E3 ubiquitin-protein l | 0.199 | 0.109 | 0.307 | 1.6e-09 | |
| ZFIN|ZDB-GENE-040426-1935 | 591 | klhl20 "kelch-like 20 (Drosoph | 0.261 | 0.357 | 0.245 | 2.6e-09 | |
| MGI|MGI:2444855 | 604 | Klhl20 "kelch-like 20" [Mus mu | 0.261 | 0.349 | 0.245 | 2.7e-09 | |
| UNIPROTKB|F1NMM8 | 609 | KLHL20 "Kelch-like protein 20" | 0.261 | 0.346 | 0.245 | 2.7e-09 | |
| UNIPROTKB|Q08DK3 | 609 | KLHL20 "Kelch-like protein 20" | 0.261 | 0.346 | 0.245 | 2.7e-09 |
| DICTYBASE|DDB_G0283263 migA "coagulation factor 5/8 type C-terminal domain-containing protein" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 197 (74.4 bits), Expect = 6.3e-17, Sum P(3) = 6.3e-17
Identities = 57/191 (29%), Positives = 88/191 (46%)
Query: 617 RFQHRRSSFKELQYICDGDSNGVLYFAGTSYGEHPWVNPVLAKRINITASS-PISRYTDP 675
R+Q R +Y D D G++++ T G W NP +I IT+SS D
Sbjct: 677 RYQPRPPQSILFEYSFDFDFKGIIFWISTDGGNEKWSNPHSTSKIKITSSSIDKGNLYDI 736
Query: 676 KALASRTYQGLSFAGPRMEDGHNCTWWMVDIGQDHQLMCNYYTLR--MDGSRAYIRYWNF 733
L + P +W M+D+G + ++ YYT+R + +R W+F
Sbjct: 737 VELTPNAFWTKDV--P-------ASWVMIDLGPNRTVVPMYYTIRHGLSYKSDSLRTWDF 787
Query: 734 QGSMDGKSWTNLRVHENDQTMCKHGQFASWAVIGPNALRPFRFFRVVLMGPTADAANSWN 793
QGS +G+ WT L+ H ND ++ SW V G FR+FR++ G + N+ N
Sbjct: 788 QGSTNGEQWTVLKRHTNDPSLNYKYATHSWPVTGCETA--FRYFRILQTGKNS---NNRN 842
Query: 794 FCICF-LELYG 803
F + LE+YG
Sbjct: 843 FLVIGGLEIYG 853
|
|
| WB|WBGene00016405 hecd-1 [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q18447 hecd-1 "Protein HECD-1" [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
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| DICTYBASE|DDB_G0291147 DDB_G0291147 [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q5ZKD9 KLHL20 "Kelch-like protein 20" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
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| UNIPROTKB|H0YJP0 HECTD1 "E3 ubiquitin-protein ligase HECTD1" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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| ZFIN|ZDB-GENE-040426-1935 klhl20 "kelch-like 20 (Drosophila)" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
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| MGI|MGI:2444855 Klhl20 "kelch-like 20" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1NMM8 KLHL20 "Kelch-like protein 20" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q08DK3 KLHL20 "Kelch-like protein 20" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q8LEV3 | Y2060_ARATH | No assigned EC number | 0.6810 | 0.9975 | 0.9938 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 806 | |||
| pfam12248 | 103 | pfam12248, Methyltransf_FA, Farnesoic acid 0-methy | 3e-24 | |
| pfam00651 | 101 | pfam00651, BTB, BTB/POZ domain | 2e-15 | |
| smart00225 | 97 | smart00225, BTB, Broad-Complex, Tramtrack and Bric | 2e-14 | |
| pfam00651 | 101 | pfam00651, BTB, BTB/POZ domain | 9e-14 | |
| smart00225 | 97 | smart00225, BTB, Broad-Complex, Tramtrack and Bric | 7e-09 | |
| pfam00754 | 128 | pfam00754, F5_F8_type_C, F5/8 type C domain | 2e-08 | |
| PHA03098 | 534 | PHA03098, PHA03098, kelch-like protein; Provisiona | 1e-07 | |
| smart00875 | 101 | smart00875, BACK, BTB And C-terminal Kelch | 3e-06 | |
| cd00057 | 143 | cd00057, FA58C, Coagulation factor 5/8 C-terminal | 2e-04 |
| >gnl|CDD|152683 pfam12248, Methyltransf_FA, Farnesoic acid 0-methyl transferase | Back alignment and domain information |
|---|
Score = 97.4 bits (243), Expect = 3e-24
Identities = 32/100 (32%), Positives = 43/100 (43%), Gaps = 6/100 (6%)
Query: 56 YHYKRDNSPHYTVIIGSNRNRRLKIEVN--GKTVVDVAGVGLCCSSAFQSYWISI-YDGL 112
HY DN P Y +++G N R I + +V GL + +WI I DG
Sbjct: 7 THYPYDNDPVYEIVLGGWNNTRSAIRRQKRNDDLAEVQTPGLLSPFEPRMFWIEIFQDGE 66
Query: 113 ISIGKGRYPFQNLVFQWLDSSPNCSVRYVGLSSWDKHVGY 152
I +GK L F D SP V YVG +SW + +
Sbjct: 67 IEVGKDGDDEPFLEFT--DPSP-IPVNYVGFTSWGAPLVF 103
|
This domain family is found in bacteria and eukaryotes, and is approximately 110 amino acids in length.Farnesoic acid O-methyl transferase (FAMeT) is the enzyme that catalyzes the formation of methyl farnesoate (MF) from farnesoic acid (FA) in the biosynthetic pathway of juvenile hormone (JH). Length = 103 |
| >gnl|CDD|216043 pfam00651, BTB, BTB/POZ domain | Back alignment and domain information |
|---|
| >gnl|CDD|197585 smart00225, BTB, Broad-Complex, Tramtrack and Bric a brac | Back alignment and domain information |
|---|
| >gnl|CDD|216043 pfam00651, BTB, BTB/POZ domain | Back alignment and domain information |
|---|
| >gnl|CDD|197585 smart00225, BTB, Broad-Complex, Tramtrack and Bric a brac | Back alignment and domain information |
|---|
| >gnl|CDD|216100 pfam00754, F5_F8_type_C, F5/8 type C domain | Back alignment and domain information |
|---|
| >gnl|CDD|222983 PHA03098, PHA03098, kelch-like protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|197943 smart00875, BACK, BTB And C-terminal Kelch | Back alignment and domain information |
|---|
| >gnl|CDD|238014 cd00057, FA58C, Coagulation factor 5/8 C-terminal domain, discoidin domain; Cell surface-attached carbohydrate-binding domain, present in eukaryotes and assumed to have horizontally transferred to eubacterial genomes | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 806 | |||
| KOG4441 | 571 | consensus Proteins containing BTB/POZ and Kelch do | 100.0 | |
| PHA02713 | 557 | hypothetical protein; Provisional | 100.0 | |
| PHA02790 | 480 | Kelch-like protein; Provisional | 100.0 | |
| PHA03098 | 534 | kelch-like protein; Provisional | 100.0 | |
| KOG4276 | 113 | consensus Predicted hormone receptor interactor [G | 99.97 | |
| KOG4350 | 620 | consensus Uncharacterized conserved protein, conta | 99.97 | |
| PF12248 | 102 | Methyltransf_FA: Farnesoic acid 0-methyl transfera | 99.95 | |
| KOG4441 | 571 | consensus Proteins containing BTB/POZ and Kelch do | 99.95 | |
| KOG0783 | 1267 | consensus Uncharacterized conserved protein, conta | 99.94 | |
| PHA02713 | 557 | hypothetical protein; Provisional | 99.93 | |
| PHA02790 | 480 | Kelch-like protein; Provisional | 99.89 | |
| KOG2075 | 521 | consensus Topoisomerase TOP1-interacting protein B | 99.89 | |
| PHA03098 | 534 | kelch-like protein; Provisional | 99.86 | |
| KOG4591 | 280 | consensus Uncharacterized conserved protein, conta | 99.72 | |
| KOG4682 | 488 | consensus Uncharacterized conserved protein, conta | 99.67 | |
| PF00651 | 111 | BTB: BTB/POZ domain; InterPro: IPR013069 The BTB ( | 99.65 | |
| PF00651 | 111 | BTB: BTB/POZ domain; InterPro: IPR013069 The BTB ( | 99.55 | |
| KOG2838 | 401 | consensus Uncharacterized conserved protein, conta | 99.54 | |
| PF07707 | 103 | BACK: BTB And C-terminal Kelch; InterPro: IPR01170 | 99.53 | |
| smart00225 | 90 | BTB Broad-Complex, Tramtrack and Bric a brac. Doma | 99.43 | |
| smart00875 | 101 | BACK BTB And C-terminal Kelch. The BACK domain is | 99.42 | |
| KOG4350 | 620 | consensus Uncharacterized conserved protein, conta | 99.41 | |
| KOG0511 | 516 | consensus Ankyrin repeat protein [General function | 99.35 | |
| KOG4591 | 280 | consensus Uncharacterized conserved protein, conta | 99.32 | |
| smart00225 | 90 | BTB Broad-Complex, Tramtrack and Bric a brac. Doma | 99.22 | |
| KOG2075 | 521 | consensus Topoisomerase TOP1-interacting protein B | 99.11 | |
| KOG0783 | 1267 | consensus Uncharacterized conserved protein, conta | 98.25 | |
| cd00057 | 143 | FA58C Substituted updates: Jan 31, 2002 | 98.22 | |
| KOG4682 | 488 | consensus Uncharacterized conserved protein, conta | 97.9 | |
| KOG2838 | 401 | consensus Uncharacterized conserved protein, conta | 97.8 | |
| PF00754 | 129 | F5_F8_type_C: F5/8 type C domain; InterPro: IPR000 | 97.64 | |
| TIGR03548 | 323 | mutarot_permut cyclically-permuted mutatrotase fam | 97.3 | |
| KOG2716 | 230 | consensus Polymerase delta-interacting protein PDI | 97.29 | |
| TIGR03547 | 346 | muta_rot_YjhT mutatrotase, YjhT family. Members of | 97.18 | |
| PF13964 | 50 | Kelch_6: Kelch motif | 97.09 | |
| PF07738 | 135 | Sad1_UNC: Sad1 / UNC-like C-terminal ; InterPro: I | 97.04 | |
| PLN02153 | 341 | epithiospecifier protein | 96.94 | |
| PRK14131 | 376 | N-acetylneuraminic acid mutarotase; Provisional | 96.92 | |
| KOG3473 | 112 | consensus RNA polymerase II transcription elongati | 96.89 | |
| PF02214 | 94 | BTB_2: BTB/POZ domain; InterPro: IPR003131 Potassi | 96.82 | |
| TIGR03548 | 323 | mutarot_permut cyclically-permuted mutatrotase fam | 96.73 | |
| PF11822 | 317 | DUF3342: Domain of unknown function (DUF3342); Int | 96.68 | |
| TIGR03547 | 346 | muta_rot_YjhT mutatrotase, YjhT family. Members of | 96.62 | |
| PLN02153 | 341 | epithiospecifier protein | 96.17 | |
| smart00231 | 139 | FA58C Coagulation factor 5/8 C-terminal domain, di | 96.15 | |
| PLN02193 | 470 | nitrile-specifier protein | 96.09 | |
| PRK14131 | 376 | N-acetylneuraminic acid mutarotase; Provisional | 96.07 | |
| PLN02193 | 470 | nitrile-specifier protein | 95.88 | |
| smart00612 | 47 | Kelch Kelch domain. | 95.86 | |
| KOG1987 | 297 | consensus Speckle-type POZ protein SPOP and relate | 95.84 | |
| PF01344 | 47 | Kelch_1: Kelch motif; InterPro: IPR006652 Kelch is | 95.69 | |
| PF02214 | 94 | BTB_2: BTB/POZ domain; InterPro: IPR003131 Potassi | 94.86 | |
| KOG2716 | 230 | consensus Polymerase delta-interacting protein PDI | 94.72 | |
| smart00512 | 104 | Skp1 Found in Skp1 protein family. Family of Skp1 | 94.65 | |
| PF11822 | 317 | DUF3342: Domain of unknown function (DUF3342); Int | 94.02 | |
| PF13415 | 49 | Kelch_3: Galactose oxidase, central domain | 93.79 | |
| KOG1665 | 302 | consensus AFH1-interacting protein FIP2, contains | 93.31 | |
| PF03931 | 62 | Skp1_POZ: Skp1 family, tetramerisation domain; Int | 93.2 | |
| KOG1987 | 297 | consensus Speckle-type POZ protein SPOP and relate | 92.75 | |
| smart00607 | 151 | FTP eel-Fucolectin Tachylectin-4 Pentaxrin-1 Domai | 91.98 | |
| KOG1724 | 162 | consensus SCF ubiquitin ligase, Skp1 component [Po | 91.66 | |
| KOG2714 | 465 | consensus SETA binding protein SB1 and related pro | 91.58 | |
| COG5201 | 158 | SKP1 SCF ubiquitin ligase, SKP1 component [Posttra | 90.55 | |
| PF07646 | 49 | Kelch_2: Kelch motif; InterPro: IPR011498 Kelch is | 89.13 | |
| KOG0379 | 482 | consensus Kelch repeat-containing proteins [Genera | 88.51 | |
| PF01344 | 47 | Kelch_1: Kelch motif; InterPro: IPR006652 Kelch is | 88.4 | |
| PF13964 | 50 | Kelch_6: Kelch motif | 88.24 | |
| KOG4693 | 392 | consensus Uncharacterized conserved protein, conta | 87.95 | |
| PF13418 | 49 | Kelch_4: Galactose oxidase, central domain; PDB: 2 | 87.91 | |
| KOG3473 | 112 | consensus RNA polymerase II transcription elongati | 86.98 | |
| PF06439 | 185 | DUF1080: Domain of Unknown Function (DUF1080); Int | 85.27 | |
| KOG0511 | 516 | consensus Ankyrin repeat protein [General function | 85.06 | |
| KOG1230 | 521 | consensus Protein containing repeated kelch motifs | 83.57 | |
| KOG1230 | 521 | consensus Protein containing repeated kelch motifs | 81.71 | |
| PF07646 | 49 | Kelch_2: Kelch motif; InterPro: IPR011498 Kelch is | 81.4 | |
| PF01466 | 78 | Skp1: Skp1 family, dimerisation domain; InterPro: | 81.28 | |
| smart00512 | 104 | Skp1 Found in Skp1 protein family. Family of Skp1 | 81.28 |
| >KOG4441 consensus Proteins containing BTB/POZ and Kelch domains, involved in regulatory/signal transduction processes [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-51 Score=474.64 Aligned_cols=350 Identities=25% Similarity=0.352 Sum_probs=322.4
Q ss_pred cCCCCcchHHHHHHhhhcCCCceeEEEEEcCeeeEEEeeHHHHhcCCHHHHHhhcCCCCCCCcceEEeCCCCHHHHHHHH
Q 040529 326 VFPFGLPINSQRLKQLASNCEYADVNIYVESHGLVAQSHKIILSLWSVPFAKMFTNGMSESYSSDVHLRDVSLKAFKIML 405 (806)
Q Consensus 326 ~~~~~~~~~l~~l~~l~~~~~~sDV~l~v~~~~~~~~aHr~ILaa~S~yF~~mf~~~~~Es~~~~I~l~~v~~~~f~~lL 405 (806)
..+.+...+++.|+.+++.+.+|||+|.++++. |+|||.||||+|+||++||+++++|+.+.+|.|.++++.+++.++
T Consensus 15 ~~~~h~~~~l~~l~~lr~~~~lcDv~L~v~~~~--~~aHR~VLAa~S~YFraMFt~~l~e~~~~~i~l~~v~~~~l~~ll 92 (571)
T KOG4441|consen 15 TDPSHSKFLLQGLNELREEGLLCDVTLLVGDRE--FPAHRVVLAACSPYFRAMFTSGLKESKQKEINLEGVDPETLELLL 92 (571)
T ss_pred ccHHHHHHHHHHHHHHHHhCCCceEEEEECCee--echHHHHHHhccHHHHHHhcCCcccccceEEEEecCCHHHHHHHH
Confidence 344566777899999999999999999999954 999999999999999999999999999999999999999999999
Q ss_pred hHHhcCccccCCCCchhHHHHHHHHHHHhhCchHHHHHHHHHHhhcCCCCCcHHHHHHHhhhcCCHHHHHHHHHHHHhch
Q 040529 406 EFMYSGELNIEDSLDFGSLLLQLLILSDQFGVTLLHQECCKLLLECFSEDSVCPILQVVTPISSCKLIEETCERKFALHF 485 (806)
Q Consensus 406 ~fiYtg~l~i~~~~n~~~~v~~Ll~~A~~l~l~~L~~~c~~~L~~~l~~~n~~~~l~~~a~~~~~~~L~~~~~~~I~~nf 485 (806)
+|+||+++.++. +| +.+||.+|++||++.+++.|++||.++++++| |+.+..+|+.|+|.+|.+.+..||..||
T Consensus 93 ~y~Yt~~i~i~~-~n----Vq~ll~aA~~lQi~~v~~~C~~fL~~~l~~~N-clgi~~~a~~~~~~~L~~~a~~~i~~~F 166 (571)
T KOG4441|consen 93 DYAYTGKLEISE-DN----VQELLEAASLLQIPEVVDACCEFLESQLDPSN-CLGIRRFAELHSCTELLEVADEYILQHF 166 (571)
T ss_pred HHhhcceEEech-Hh----HHHHHHHHHHhhhHHHHHHHHHHHHhcCCHHH-HHHHHHHHHhcCcHHHHHHHHHHHHHHH
Confidence 999999999986 66 99999999999999999999999999999999 9999999999999999999999999999
Q ss_pred hhhhccccccccCCHHHHHhhccCCCCCCCCHHHHHHHHHHHHhccccccCcchhhHHHhhcCchhhHHHHHHhHhhccc
Q 040529 486 DYCTTASLDFVFLDEATFSSIIRHPDLTVTSEERVLNAILMWGMKAKELCGWEEMDELIIKLTPELVFEERLQSVNYLLP 565 (806)
Q Consensus 486 ~~l~~~~~~F~~L~~~~l~~IL~sd~L~V~sE~~v~~avl~Wi~~~~~~~~w~~~~~~l~~~~p~~~~~~r~~~l~~Ll~ 565 (806)
.++ .++++|++||.+++..||++|.|+|.+|++||+++++|++++. +.|..+++.|++
T Consensus 167 ~~v-~~~eefl~L~~~~l~~ll~~d~l~v~~E~~vf~a~~~Wv~~d~---------------------~~R~~~~~~ll~ 224 (571)
T KOG4441|consen 167 AEV-SKTEEFLLLSLEELIGLLSSDDLNVDSEEEVFEAAMRWVKHDF---------------------EEREEHLPALLE 224 (571)
T ss_pred HHH-hccHHhhCCCHHHHHhhccccCCCcCCHHHHHHHHHHHHhcCH---------------------hhHHHHHHHHHH
Confidence 999 9999999999999999999999999999999999999999984 678999999999
Q ss_pred cccccccChHHHhh-cccccccccchhHHHHHHHHHHHHhcCCCCCCCCCcccccccccccccceeeecCCCC-------
Q 040529 566 FVRFPLLPHALLKK-MENSCLNRQIPIFDNLVKEAIIFIESGLAVPGSNQSVRFQHRRSSFKELQYICDGDSN------- 637 (806)
Q Consensus 566 ~IRf~lls~~~L~~-v~~~~l~~~~~~~~~~l~ea~~~~~~~~~~~~~~~~~r~~~r~~~~~e~i~~~gG~~~------- 637 (806)
+||+|+|++.+|.. +...++++..+.|++++.+|++|+..+..++. ++++++++|. ...+.++++||..+
T Consensus 225 ~vr~~ll~~~~l~~~v~~~~~~~~~~~c~~~l~ea~~~~~~~~~~~~-~~~~~t~~r~-~~~~~l~~vGG~~~~~~~~~~ 302 (571)
T KOG4441|consen 225 AVRLPLLPPQFLVEIVESEPLIKRDSACRDLLDEAKKYHLLPQRRPV-MQSPRTRPRR-SVSGKLVAVGGYNRQGQSLRS 302 (571)
T ss_pred hcCccCCCHHHHHHHHhhhhhhccCHHHHHHHHHHHHHhhCcccCcc-ccCCCcccCc-CCCCeEEEECCCCCCCcccce
Confidence 99999999999865 88889999999999999999999999887665 5888999987 55789999999753
Q ss_pred ------------------------------ceEEEecccC-C-----ceeEecCCCCcEEEeccCCCCCcC------CCC
Q 040529 638 ------------------------------GVLYFAGTSY-G-----EHPWVNPVLAKRINITASSPISRY------TDP 675 (806)
Q Consensus 638 ------------------------------gvlY~iGg~~-~-----sve~ynP~~~~w~~vt~s~~~~r~------~~~ 675 (806)
|.||++||.+ + ++++|||++++|..+ ++|+.+|. .+|
T Consensus 303 ve~yd~~~~~w~~~a~m~~~r~~~~~~~~~~~lYv~GG~~~~~~~l~~ve~YD~~~~~W~~~-a~M~~~R~~~~v~~l~g 381 (571)
T KOG4441|consen 303 VECYDPKTNEWSSLAPMPSPRCRVGVAVLNGKLYVVGGYDSGSDRLSSVERYDPRTNQWTPV-APMNTKRSDFGVAVLDG 381 (571)
T ss_pred eEEecCCcCcEeecCCCCcccccccEEEECCEEEEEccccCCCcccceEEEecCCCCceecc-CCccCccccceeEEECC
Confidence 3899999988 3 899999999999885 67788884 567
Q ss_pred eEEeecccCCccc-cCCeeecCCCCeeEEEecCC
Q 040529 676 KALASRTYQGLSF-AGPRMEDGHNCTWWMVDIGQ 708 (806)
Q Consensus 676 ~~~v~~g~~g~~~-~~~~~y~~~~nsW~~vd~~~ 708 (806)
++|++||++|... .+.++|||.+|+|..++...
T Consensus 382 ~iYavGG~dg~~~l~svE~YDp~~~~W~~va~m~ 415 (571)
T KOG4441|consen 382 KLYAVGGFDGEKSLNSVECYDPVTNKWTPVAPML 415 (571)
T ss_pred EEEEEeccccccccccEEEecCCCCcccccCCCC
Confidence 8999999998866 67899999999999988554
|
|
| >PHA02713 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PHA02790 Kelch-like protein; Provisional | Back alignment and domain information |
|---|
| >PHA03098 kelch-like protein; Provisional | Back alignment and domain information |
|---|
| >KOG4276 consensus Predicted hormone receptor interactor [General function prediction only] | Back alignment and domain information |
|---|
| >KOG4350 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only] | Back alignment and domain information |
|---|
| >PF12248 Methyltransf_FA: Farnesoic acid 0-methyl transferase; InterPro: IPR022041 This domain, found in farnesoic acid O-methyl transferase, is approximately 110 amino acids in length | Back alignment and domain information |
|---|
| >KOG4441 consensus Proteins containing BTB/POZ and Kelch domains, involved in regulatory/signal transduction processes [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
| >KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown] | Back alignment and domain information |
|---|
| >PHA02713 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PHA02790 Kelch-like protein; Provisional | Back alignment and domain information |
|---|
| >KOG2075 consensus Topoisomerase TOP1-interacting protein BTBD1 [Function unknown] | Back alignment and domain information |
|---|
| >PHA03098 kelch-like protein; Provisional | Back alignment and domain information |
|---|
| >KOG4591 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only] | Back alignment and domain information |
|---|
| >KOG4682 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only] | Back alignment and domain information |
|---|
| >PF00651 BTB: BTB/POZ domain; InterPro: IPR013069 The BTB (for BR-C, ttk and bab) [] or POZ (for Pox virus and Zinc finger) [] domain is present near the N terminus of a fraction of zinc finger (IPR007087 from INTERPRO) proteins and in proteins that contain the IPR006652 from INTERPRO motif such as Kelch and a family of pox virus proteins | Back alignment and domain information |
|---|
| >PF00651 BTB: BTB/POZ domain; InterPro: IPR013069 The BTB (for BR-C, ttk and bab) [] or POZ (for Pox virus and Zinc finger) [] domain is present near the N terminus of a fraction of zinc finger (IPR007087 from INTERPRO) proteins and in proteins that contain the IPR006652 from INTERPRO motif such as Kelch and a family of pox virus proteins | Back alignment and domain information |
|---|
| >KOG2838 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only] | Back alignment and domain information |
|---|
| >PF07707 BACK: BTB And C-terminal Kelch; InterPro: IPR011705 This domain is found associated with (IPR000210 from INTERPRO) and (IPR006652 from INTERPRO) | Back alignment and domain information |
|---|
| >smart00225 BTB Broad-Complex, Tramtrack and Bric a brac | Back alignment and domain information |
|---|
| >smart00875 BACK BTB And C-terminal Kelch | Back alignment and domain information |
|---|
| >KOG4350 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only] | Back alignment and domain information |
|---|
| >KOG0511 consensus Ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
| >KOG4591 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only] | Back alignment and domain information |
|---|
| >smart00225 BTB Broad-Complex, Tramtrack and Bric a brac | Back alignment and domain information |
|---|
| >KOG2075 consensus Topoisomerase TOP1-interacting protein BTBD1 [Function unknown] | Back alignment and domain information |
|---|
| >KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown] | Back alignment and domain information |
|---|
| >cd00057 FA58C Substituted updates: Jan 31, 2002 | Back alignment and domain information |
|---|
| >KOG4682 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only] | Back alignment and domain information |
|---|
| >KOG2838 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only] | Back alignment and domain information |
|---|
| >PF00754 F5_F8_type_C: F5/8 type C domain; InterPro: IPR000421 Blood coagulation factors V and VIII contain a C-terminal, twice repeated, domain of about 150 amino acids, which is called F5/8 type C, FA58C, or C1/C2- like domain | Back alignment and domain information |
|---|
| >TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein | Back alignment and domain information |
|---|
| >KOG2716 consensus Polymerase delta-interacting protein PDIP1 and related proteins, contain BTB/POZ domain [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR03547 muta_rot_YjhT mutatrotase, YjhT family | Back alignment and domain information |
|---|
| >PF13964 Kelch_6: Kelch motif | Back alignment and domain information |
|---|
| >PF07738 Sad1_UNC: Sad1 / UNC-like C-terminal ; InterPro: IPR012919 The Caenorhabditis elegans UNC-84 protein is a nuclear envelope protein that is involved in nuclear anchoring and migration during development | Back alignment and domain information |
|---|
| >PLN02153 epithiospecifier protein | Back alignment and domain information |
|---|
| >PRK14131 N-acetylneuraminic acid mutarotase; Provisional | Back alignment and domain information |
|---|
| >KOG3473 consensus RNA polymerase II transcription elongation factor Elongin/SIII, subunit elongin C [Transcription] | Back alignment and domain information |
|---|
| >PF02214 BTB_2: BTB/POZ domain; InterPro: IPR003131 Potassium channels are the most diverse group of the ion channel family [, ] | Back alignment and domain information |
|---|
| >TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein | Back alignment and domain information |
|---|
| >PF11822 DUF3342: Domain of unknown function (DUF3342); InterPro: IPR021777 This family of proteins are functionally uncharacterised | Back alignment and domain information |
|---|
| >TIGR03547 muta_rot_YjhT mutatrotase, YjhT family | Back alignment and domain information |
|---|
| >PLN02153 epithiospecifier protein | Back alignment and domain information |
|---|
| >smart00231 FA58C Coagulation factor 5/8 C-terminal domain, discoidin domain | Back alignment and domain information |
|---|
| >PLN02193 nitrile-specifier protein | Back alignment and domain information |
|---|
| >PRK14131 N-acetylneuraminic acid mutarotase; Provisional | Back alignment and domain information |
|---|
| >PLN02193 nitrile-specifier protein | Back alignment and domain information |
|---|
| >smart00612 Kelch Kelch domain | Back alignment and domain information |
|---|
| >KOG1987 consensus Speckle-type POZ protein SPOP and related proteins with TRAF, MATH and BTB/POZ domains [Cell cycle control, cell division, chromosome partitioning; General function prediction only] | Back alignment and domain information |
|---|
| >PF01344 Kelch_1: Kelch motif; InterPro: IPR006652 Kelch is a 50-residue motif, named after the Drosophila mutant in which it was first identified [] | Back alignment and domain information |
|---|
| >PF02214 BTB_2: BTB/POZ domain; InterPro: IPR003131 Potassium channels are the most diverse group of the ion channel family [, ] | Back alignment and domain information |
|---|
| >KOG2716 consensus Polymerase delta-interacting protein PDIP1 and related proteins, contain BTB/POZ domain [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >smart00512 Skp1 Found in Skp1 protein family | Back alignment and domain information |
|---|
| >PF11822 DUF3342: Domain of unknown function (DUF3342); InterPro: IPR021777 This family of proteins are functionally uncharacterised | Back alignment and domain information |
|---|
| >PF13415 Kelch_3: Galactose oxidase, central domain | Back alignment and domain information |
|---|
| >KOG1665 consensus AFH1-interacting protein FIP2, contains BTB/POZ domain and pentapeptide repeats [General function prediction only] | Back alignment and domain information |
|---|
| >PF03931 Skp1_POZ: Skp1 family, tetramerisation domain; InterPro: IPR016073 SKP1 (together with SKP2) was identified as an essential component of the cyclin A-CDK2 S phase kinase complex [] | Back alignment and domain information |
|---|
| >KOG1987 consensus Speckle-type POZ protein SPOP and related proteins with TRAF, MATH and BTB/POZ domains [Cell cycle control, cell division, chromosome partitioning; General function prediction only] | Back alignment and domain information |
|---|
| >smart00607 FTP eel-Fucolectin Tachylectin-4 Pentaxrin-1 Domain | Back alignment and domain information |
|---|
| >KOG1724 consensus SCF ubiquitin ligase, Skp1 component [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG2714 consensus SETA binding protein SB1 and related proteins, contain BTB/POZ domain [General function prediction only] | Back alignment and domain information |
|---|
| >COG5201 SKP1 SCF ubiquitin ligase, SKP1 component [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PF07646 Kelch_2: Kelch motif; InterPro: IPR011498 Kelch is a 50-residue motif, named after the Drosophila mutant in which it was first identified [] | Back alignment and domain information |
|---|
| >KOG0379 consensus Kelch repeat-containing proteins [General function prediction only] | Back alignment and domain information |
|---|
| >PF01344 Kelch_1: Kelch motif; InterPro: IPR006652 Kelch is a 50-residue motif, named after the Drosophila mutant in which it was first identified [] | Back alignment and domain information |
|---|
| >PF13964 Kelch_6: Kelch motif | Back alignment and domain information |
|---|
| >KOG4693 consensus Uncharacterized conserved protein, contains kelch repeat [General function prediction only] | Back alignment and domain information |
|---|
| >PF13418 Kelch_4: Galactose oxidase, central domain; PDB: 2UVK_B | Back alignment and domain information |
|---|
| >KOG3473 consensus RNA polymerase II transcription elongation factor Elongin/SIII, subunit elongin C [Transcription] | Back alignment and domain information |
|---|
| >PF06439 DUF1080: Domain of Unknown Function (DUF1080); InterPro: IPR010496 This is a family of proteins of unknown function | Back alignment and domain information |
|---|
| >KOG0511 consensus Ankyrin repeat protein [General function prediction only] | Back alignment and domain information |
|---|
| >KOG1230 consensus Protein containing repeated kelch motifs [General function prediction only] | Back alignment and domain information |
|---|
| >KOG1230 consensus Protein containing repeated kelch motifs [General function prediction only] | Back alignment and domain information |
|---|
| >PF07646 Kelch_2: Kelch motif; InterPro: IPR011498 Kelch is a 50-residue motif, named after the Drosophila mutant in which it was first identified [] | Back alignment and domain information |
|---|
| >PF01466 Skp1: Skp1 family, dimerisation domain; InterPro: IPR016072 SKP1 (together with SKP2) was identified as an essential component of the cyclin A-CDK2 S phase kinase complex [] | Back alignment and domain information |
|---|
| >smart00512 Skp1 Found in Skp1 protein family | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 806 | ||||
| 4eoz_A | 145 | Crystal Structure Of The Spop Btb Domain Complexed | 5e-04 | ||
| 3hqi_A | 312 | Structures Of Spop-Substrate Complexes: Insights In | 9e-04 |
| >pdb|4EOZ|A Chain A, Crystal Structure Of The Spop Btb Domain Complexed With The Cul3 N- Terminal Domain Length = 145 | Back alignment and structure |
|
| >pdb|3HQI|A Chain A, Structures Of Spop-Substrate Complexes: Insights Into Molecular Architectures Of Btb-Cul3 Ubiquitin Ligases: SpopmathxBTB3-Box-Pucsbc1 Length = 312 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B Length = 256 | Back alignment and structure |
|---|
Score = 104 bits (261), Expect = 5e-25
Identities = 45/270 (16%), Positives = 95/270 (35%), Gaps = 45/270 (16%)
Query: 336 QRLKQLASNCEYADVNIYVESHGLVAQSHKIILSLWSVPFAKMFTNG--MSESYSSDVHL 393
+ L + D ++ ++ + K IL+ S + + + L
Sbjct: 20 RALSSFREESRFCDAHLVLDGEEIPV--QKNILAAASPYIRTKLNYNPPKDDGSTYKIEL 77
Query: 394 RDVSLKAFKIMLEFMYSGELNI-EDSLDFGSLLLQLLILSDQFGVTLLHQECCKLLLECF 452
+S+ + +L++++SG++ + ED+ + ++ +D +T L CC+ L C
Sbjct: 78 EGISVMVMREILDYIFSGQIRLNEDT------IQDVVQAADLLLLTDLKTLCCEFLEGCI 131
Query: 453 SEDSVCPILQVVTPISSCKLIEETCERKFAL-HF-DYCTTASLDFVFLDEATFSSIIRHP 510
+ ++ I + ++ HF D +T +F+ L +I
Sbjct: 132 AAENCIGIRDFALHYCLHHVHYLA--TEYLETHFRDVSSTE--EFLELSPQKLKEVISLE 187
Query: 511 DLTVTSEERVLNAILMWGMKAKELCGWEEMDELIIKLTPELVFEERLQSVNYLLPFVRFP 570
L V +E V A++ W I E R + ++ +
Sbjct: 188 KLNVGNERYVFEAVIRW-----------------IAHDT----EIRKVHMKDVMSALWVS 226
Query: 571 LL-PHALLKKMENSCLNRQIPIFDNLVKEA 599
L L ++M N P+ +VKE
Sbjct: 227 GLDSSYLREQMLNE------PLVREIVKEC 250
|
| >3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B Length = 256 | Back alignment and structure |
|---|
| >3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} Length = 279 | Back alignment and structure |
|---|
| >3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} Length = 279 | Back alignment and structure |
|---|
| >3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens} Length = 172 | Back alignment and structure |
|---|
| >3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens} Length = 172 | Back alignment and structure |
|---|
| >4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens} Length = 145 | Back alignment and structure |
|---|
| >4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens} Length = 145 | Back alignment and structure |
|---|
| >3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A Length = 312 | Back alignment and structure |
|---|
| >3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A Length = 312 | Back alignment and structure |
|---|
| >2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens} Length = 109 | Back alignment and structure |
|---|
| >2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens} Length = 109 | Back alignment and structure |
|---|
| >2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A Length = 120 | Back alignment and structure |
|---|
| >2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A Length = 120 | Back alignment and structure |
|---|
| >1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A Length = 127 | Back alignment and structure |
|---|
| >1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A Length = 127 | Back alignment and structure |
|---|
| >2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens} Length = 144 | Back alignment and structure |
|---|
| >2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens} Length = 144 | Back alignment and structure |
|---|
| >2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens} Length = 116 | Back alignment and structure |
|---|
| >2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens} Length = 116 | Back alignment and structure |
|---|
| >2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus} Length = 135 | Back alignment and structure |
|---|
| >2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus} Length = 135 | Back alignment and structure |
|---|
| >2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens} Length = 124 | Back alignment and structure |
|---|
| >2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens} Length = 124 | Back alignment and structure |
|---|
| >3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} PDB: 3ohv_A Length = 125 | Back alignment and structure |
|---|
| >3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} PDB: 3ohv_A Length = 125 | Back alignment and structure |
|---|
| >3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens} Length = 119 | Back alignment and structure |
|---|
| >3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens} Length = 119 | Back alignment and structure |
|---|
| >2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus} Length = 138 | Back alignment and structure |
|---|
| >2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus} Length = 138 | Back alignment and structure |
|---|
| >3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens} Length = 129 | Back alignment and structure |
|---|
| >3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens} Length = 129 | Back alignment and structure |
|---|
| >1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A Length = 121 | Back alignment and structure |
|---|
| >1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A Length = 121 | Back alignment and structure |
|---|
| >3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A Length = 116 | Back alignment and structure |
|---|
| >3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A Length = 116 | Back alignment and structure |
|---|
| >2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A Length = 119 | Back alignment and structure |
|---|
| >2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A Length = 119 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} Length = 119 | Back alignment and structure |
|---|
| >3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} Length = 119 | Back alignment and structure |
|---|
| >2j1v_A Fucolectin-related protein; carbohydrate-binding protein, carbohydrate binding protein; HET: NAG GAL FUC; 1.45A {Streptococcus pneumoniae} PDB: 2j1r_A* 2j1t_A* 2j1u_A* 2j1s_A* Length = 151 | Back alignment and structure |
|---|
| >2j1a_A Hyaluronidase, CBM32; protein-carbohydrate interaction, glycoside hydrolase, GH84C, hydrolase; HET: GAL; 1.49A {Clostridium perfringens} PDB: 2j1e_A* 2j7m_A* Length = 150 | Back alignment and structure |
|---|
| >2jda_A Yecbm32; hypothetical protein, carbohydrate- binding module, sugar-binding protein, pectin, plant cell WALL, galacturonic acid; 1.35A {Yersinia enterocolitica} PDB: 2jd9_A Length = 145 | Back alignment and structure |
|---|
| >2j22_A Fucolectin-related protein; carbohydrate-binding protein, carbohydrate binding protein; 1.8A {Streptococcus pneumoniae} Length = 148 | Back alignment and structure |
|---|
| >4a41_A GH89_CBM32-5, alpha-N-acetylglucosaminidase family protein; hydrolase, family 89 glycoside hydrolase, family 32 carbohyd binding module; HET: GAL; 1.55A {Clostridium perfringens} PDB: 4a44_A* 4a45_A* 4aax_A* Length = 161 | Back alignment and structure |
|---|
| >3f2z_A Uncharacterized protein BF3579; the present C-terminal domain is predominantly composed of B strands., structural genomics, PSI-2; 1.30A {Bacteroides fragilis} PDB: 2kd7_A Length = 159 | Back alignment and structure |
|---|
| >1k12_A Lectin; beta barrel, protein carbohydrate complex, sugar binding protein; HET: FUC; 1.90A {Anguilla anguilla} SCOP: b.18.1.15 Length = 158 | Back alignment and structure |
|---|
| >3hnm_A Putative chitobiase; PSI-2, protein structure initiative, northeast structural genomics consortium, NESG, BTR319D.BT_411; 3.00A {Bacteroides thetaiotaomicron} Length = 172 | Back alignment and structure |
|---|
| >3ggl_A Putative chitobiase; X-RAY, structure genomics, NESG, BTR324A, Q8A9F0_bactn, BT_0865, PSI-2, protein structure initiative; 3.00A {Bacteroides thetaiotaomicron} Length = 169 | Back alignment and structure |
|---|
| >3lei_A Platelet aggregation factor SM-HPAF; lectin domain of lectinolysin, fucose, blood clotting, nicke; HET: FUC; 1.90A {Streptococcus mitis} PDB: 3leg_A* 3le0_A* 3lek_A* Length = 153 | Back alignment and structure |
|---|
| >4a4a_A Alpha-N-acetylglucosaminidase family protein; hydrolase, 2 hydrolase, family 89 glycoside hydrolase, mucin carbohydrate-active enzyme; HET: NDG GAL; 1.90A {Clostridium perfringens} PDB: 2vcc_A 2vc9_A* 2vcb_A* 2vca_A Length = 914 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 806 | |||
| 3i3n_A | 279 | Kelch-like protein 11; structural genomics, BTB, K | 100.0 | |
| 3hve_A | 256 | Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, dis | 100.0 | |
| 3htm_A | 172 | Speckle-type POZ protein; BTB, SPOP, ubiquitin, li | 99.92 | |
| 3hqi_A | 312 | Speckle-type POZ protein; SPOP, ubiquitin, puckere | 99.89 | |
| 4eoz_A | 145 | Speckle-type POZ protein; E3 ubiquitin ligase, nuc | 99.87 | |
| 2if5_A | 120 | Zinc finger and BTB domain-containing protein 7A; | 99.85 | |
| 2z8h_A | 138 | Transcription regulator protein BACH1; BTB, POZ, d | 99.84 | |
| 1r29_A | 127 | B-cell lymphoma 6 protein; BTB domain, transcripti | 99.84 | |
| 2vkp_A | 109 | BTB/POZ domain-containing protein 6; protein-bindi | 99.82 | |
| 2ppi_A | 144 | Gigaxonin; BTB domain, protein degradation, struct | 99.82 | |
| 3b84_A | 119 | Zinc finger and BTB domain-containing protein 48; | 99.82 | |
| 2yy9_A | 135 | Zinc finger and BTB domain-containing protein 48; | 99.82 | |
| 1buo_A | 121 | POZ domain, protein (promyelocytic leukemia zinc f | 99.81 | |
| 1buo_A | 121 | POZ domain, protein (promyelocytic leukemia zinc f | 99.81 | |
| 2vpk_A | 116 | Myoneurin; transcription regulation, transcription | 99.81 | |
| 3b84_A | 119 | Zinc finger and BTB domain-containing protein 48; | 99.81 | |
| 2if5_A | 120 | Zinc finger and BTB domain-containing protein 7A; | 99.81 | |
| 1r29_A | 127 | B-cell lymphoma 6 protein; BTB domain, transcripti | 99.8 | |
| 2vpk_A | 116 | Myoneurin; transcription regulation, transcription | 99.8 | |
| 2z8h_A | 138 | Transcription regulator protein BACH1; BTB, POZ, d | 99.8 | |
| 3ohu_A | 125 | Transcription regulator protein BACH2; BTB/POZ dom | 99.79 | |
| 2yy9_A | 135 | Zinc finger and BTB domain-containing protein 48; | 99.79 | |
| 2q81_A | 119 | MIZ-1 protein; BTB/POZ domain, transcription; HET: | 99.79 | |
| 2q81_A | 119 | MIZ-1 protein; BTB/POZ domain, transcription; HET: | 99.79 | |
| 3m5b_A | 119 | Zinc finger and BTB domain-containing protein 32; | 99.79 | |
| 2ihc_A | 124 | Transcription regulator protein BACH1; BRIC-A-BRAC | 99.79 | |
| 3ga1_A | 129 | Nucleus accumbens-associated protein 1; BTB/POZ do | 99.79 | |
| 2ppi_A | 144 | Gigaxonin; BTB domain, protein degradation, struct | 99.78 | |
| 3ga1_A | 129 | Nucleus accumbens-associated protein 1; BTB/POZ do | 99.78 | |
| 3ohu_A | 125 | Transcription regulator protein BACH2; BTB/POZ dom | 99.77 | |
| 2ihc_A | 124 | Transcription regulator protein BACH1; BRIC-A-BRAC | 99.77 | |
| 3htm_A | 172 | Speckle-type POZ protein; BTB, SPOP, ubiquitin, li | 99.75 | |
| 3i3n_A | 279 | Kelch-like protein 11; structural genomics, BTB, K | 99.74 | |
| 2vkp_A | 109 | BTB/POZ domain-containing protein 6; protein-bindi | 99.74 | |
| 3m5b_A | 119 | Zinc finger and BTB domain-containing protein 32; | 99.73 | |
| 3fkc_A | 116 | Transcriptional regulator kaiso; zinc finger and B | 99.73 | |
| 3fkc_A | 116 | Transcriptional regulator kaiso; zinc finger and B | 99.73 | |
| 4eoz_A | 145 | Speckle-type POZ protein; E3 ubiquitin ligase, nuc | 99.72 | |
| 3hve_A | 256 | Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, dis | 99.7 | |
| 3hqi_A | 312 | Speckle-type POZ protein; SPOP, ubiquitin, puckere | 99.69 | |
| 2eqx_A | 105 | Kelch repeat and BTB domain-containing protein 4; | 99.54 | |
| 2ast_A | 159 | S-phase kinase-associated protein 1A; SCF-substrat | 99.25 | |
| 4ajy_C | 97 | Transcription elongation factor B polypeptide 1; E | 98.94 | |
| 1fs1_B | 141 | SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, le | 98.75 | |
| 2ast_A | 159 | S-phase kinase-associated protein 1A; SCF-substrat | 98.72 | |
| 2p1m_A | 160 | SKP1-like protein 1A; F-BOX, leucine rich repeat, | 98.59 | |
| 4ajy_C | 97 | Transcription elongation factor B polypeptide 1; E | 98.46 | |
| 1fs1_B | 141 | SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, le | 98.35 | |
| 2p1m_A | 160 | SKP1-like protein 1A; F-BOX, leucine rich repeat, | 98.31 | |
| 1hv2_A | 99 | Elongin C, ELC1; protein-peptide complex, signalin | 98.13 | |
| 3v7d_A | 169 | Suppressor of kinetochore protein 1; WD 40 domain, | 97.98 | |
| 2fnj_C | 96 | Transcription elongation factor B polypeptide 1; b | 97.97 | |
| 2j1a_A | 150 | Hyaluronidase, CBM32; protein-carbohydrate interac | 97.93 | |
| 3f2z_A | 159 | Uncharacterized protein BF3579; the present C-term | 97.92 | |
| 3ggl_A | 169 | Putative chitobiase; X-RAY, structure genomics, NE | 97.88 | |
| 3drz_A | 107 | BTB/POZ domain-containing protein KCTD5; potassium | 97.88 | |
| 2jda_A | 145 | Yecbm32; hypothetical protein, carbohydrate- bindi | 97.74 | |
| 2zwa_A | 695 | Leucine carboxyl methyltransferase 2; HET: SAH CIT | 97.59 | |
| 4a41_A | 161 | GH89_CBM32-5, alpha-N-acetylglucosaminidase family | 97.58 | |
| 2xn4_A | 302 | Kelch-like protein 2; structural protein, cytoskel | 97.54 | |
| 4gwi_A | 153 | Lectinolysin, platelet aggregation factor SM-HPAF; | 97.45 | |
| 2vpj_A | 301 | Kelch-like protein 12; adaptor protein, WNT signal | 97.43 | |
| 2vpj_A | 301 | Kelch-like protein 12; adaptor protein, WNT signal | 97.41 | |
| 2xn4_A | 302 | Kelch-like protein 2; structural protein, cytoskel | 97.38 | |
| 3ii7_A | 306 | Kelch-like protein 7; protein-binding, kelch-repea | 97.38 | |
| 1zgk_A | 308 | Kelch-like ECH-associated protein 1; beta-propelle | 97.35 | |
| 1vcb_B | 112 | Protein (elongin C); tumor suppressor, cancer, ubi | 97.33 | |
| 3ii7_A | 306 | Kelch-like protein 7; protein-binding, kelch-repea | 97.33 | |
| 4a3z_A | 161 | GH89_CBM32, alpha-N-acetylglucosaminidase family p | 97.24 | |
| 1zgk_A | 308 | Kelch-like ECH-associated protein 1; beta-propelle | 97.14 | |
| 3v7d_A | 169 | Suppressor of kinetochore protein 1; WD 40 domain, | 97.13 | |
| 4asc_A | 315 | Kelch repeat and BTB domain-containing protein 5; | 97.13 | |
| 2fnj_C | 96 | Transcription elongation factor B polypeptide 1; b | 97.11 | |
| 3drz_A | 107 | BTB/POZ domain-containing protein KCTD5; potassium | 97.05 | |
| 2woz_A | 318 | Kelch repeat and BTB domain-containing protein 10; | 96.99 | |
| 2yfu_A | 155 | Carbohydrate binding family 6; sugar binding prote | 96.92 | |
| 4asc_A | 315 | Kelch repeat and BTB domain-containing protein 5; | 96.81 | |
| 4a42_A | 149 | GH89_CBM32-4, alpha-N-acetylglucosaminidase family | 96.79 | |
| 1hv2_A | 99 | Elongin C, ELC1; protein-peptide complex, signalin | 96.75 | |
| 2woz_A | 318 | Kelch repeat and BTB domain-containing protein 10; | 96.73 | |
| 3hnm_A | 172 | Putative chitobiase; PSI-2, protein structure init | 96.72 | |
| 4a4a_A | 914 | Alpha-N-acetylglucosaminidase family protein; hydr | 96.67 | |
| 2uvk_A | 357 | YJHT; unknown function, hypothetical protein, sial | 96.67 | |
| 2wuh_A | 178 | Discoidin domain receptor 2; receptor-peptide comp | 96.53 | |
| 3drx_A | 202 | BTB/POZ domain-containing protein KCTD5; golgi, gr | 96.43 | |
| 2v5d_A | 737 | O-GLCNACASE NAGJ; family 32 carbohydrate binding m | 96.38 | |
| 1k12_A | 158 | Lectin; beta barrel, protein carbohydrate complex, | 96.37 | |
| 2zwa_A | 695 | Leucine carboxyl methyltransferase 2; HET: SAH CIT | 96.36 | |
| 3bn6_A | 158 | Lactadherin; anticoagulation, anti-coagulation, an | 96.36 | |
| 2v72_A | 143 | CBM32, EXO-alpha-sialidase; galactose, bacterial p | 96.32 | |
| 3lei_A | 153 | Platelet aggregation factor SM-HPAF; lectin domain | 96.31 | |
| 1w8o_A | 601 | Bacterial sialidase; 3D-structure, glycosidase, hy | 96.26 | |
| 3hny_M | 159 | Coagulation factor VIII; blood clotting, acute pha | 96.26 | |
| 1czt_A | 160 | Protein (coagulation factor V); membrane-binding, | 96.23 | |
| 4deq_A | 218 | Neuropilin-1, vascular endothelial growth factor; | 96.17 | |
| 2j1v_A | 151 | Fucolectin-related protein; carbohydrate-binding p | 96.07 | |
| 1k3i_A | 656 | Galactose oxidase precursor; blade beta propeller, | 96.07 | |
| 2uvk_A | 357 | YJHT; unknown function, hypothetical protein, sial | 95.89 | |
| 2j22_A | 148 | Fucolectin-related protein; carbohydrate-binding p | 95.48 | |
| 1k3i_A | 656 | Galactose oxidase precursor; blade beta propeller, | 95.47 | |
| 1vcb_B | 112 | Protein (elongin C); tumor suppressor, cancer, ubi | 95.27 | |
| 2w1s_A | 192 | Hyaluronoglucosaminidase; hexosaminidase, family 3 | 95.02 | |
| 2qqi_A | 318 | Neuropilin-1; VEGF receptor, semaphorin receptor, | 94.96 | |
| 2qqj_A | 325 | Neuropilin-2; VEGF receptor, semaphorin receptor, | 94.81 | |
| 2qqj_A | 325 | Neuropilin-2; VEGF receptor, semaphorin receptor, | 94.77 | |
| 2qqi_A | 318 | Neuropilin-1; VEGF receptor, semaphorin receptor, | 94.63 | |
| 3cqo_A | 293 | FBP32; F-lectin, fucolectin, sugar binding protein | 94.59 | |
| 4ag4_A | 351 | Epithelial discoidin domain-containing receptor 1; | 94.55 | |
| 2vm9_A | 257 | Discoidin-2, discoidin II; DDR, lectin, aggregatio | 94.31 | |
| 3drx_A | 202 | BTB/POZ domain-containing protein KCTD5; golgi, gr | 94.24 | |
| 3cqo_A | 293 | FBP32; F-lectin, fucolectin, sugar binding protein | 93.55 | |
| 1s1g_A | 124 | Potassium voltage-gated channel subfamily D membe; | 93.43 | |
| 3kvt_A | 115 | Potassium channel protein SHAW; tetramerization do | 93.36 | |
| 2qqm_A | 450 | Neuropilin-1; VEGF receptor, semaphorin receptor, | 93.14 | |
| 1s1g_A | 124 | Potassium voltage-gated channel subfamily D membe; | 93.02 | |
| 2yc2_A | 139 | IFT25, intraflagellar transport protein 25; transp | 92.71 | |
| 2qqo_A | 460 | Neuropilin-2; VEGF receptor, semaphorin receptor, | 92.52 | |
| 3eyp_A | 469 | Putative alpha-L-fucosidase; structural genomics, | 92.37 | |
| 4gz9_A | 577 | Neuropilin-1, A5 protein; multi-domain, cell-CELL | 92.17 | |
| 1t1d_A | 100 | Protein (potassium channel KV1.1); potassium chann | 91.59 | |
| 2qqm_A | 450 | Neuropilin-1; VEGF receptor, semaphorin receptor, | 91.58 | |
| 2nz0_B | 140 | Potassium voltage-gated channel subfamily D membe; | 91.5 | |
| 2nz0_B | 140 | Potassium voltage-gated channel subfamily D membe; | 91.23 | |
| 2r7e_B | 770 | Coagulation factor VIII; ceruloplasmin fold, cuppe | 91.17 | |
| 1nn7_A | 105 | Potassium channel KV4.2; teteramerization domain, | 91.0 | |
| 2qqo_A | 460 | Neuropilin-2; VEGF receptor, semaphorin receptor, | 90.93 | |
| 2qqk_A | 579 | Neuropilin-2; VEGF receptor, semaphorin receptor, | 90.92 | |
| 4gz9_A | 577 | Neuropilin-1, A5 protein; multi-domain, cell-CELL | 90.87 | |
| 1tvg_A | 153 | LOC51668 protein; cell cycle, structural genomics, | 90.83 | |
| 1nn7_A | 105 | Potassium channel KV4.2; teteramerization domain, | 90.82 | |
| 2zxq_A | 1376 | Endo-alpha-N-acetylgalactosaminidase; broken TIM b | 90.69 | |
| 2qqk_A | 579 | Neuropilin-2; VEGF receptor, semaphorin receptor, | 90.49 | |
| 3kvt_A | 115 | Potassium channel protein SHAW; tetramerization do | 88.59 | |
| 1sdd_B | 647 | Coagulation factor V; copper-binding protein, cofa | 88.28 | |
| 2cho_A | 716 | Glucosaminidase, hexosaminiase; O-GLCNACASE, hydro | 88.01 | |
| 2r7e_B | 770 | Coagulation factor VIII; ceruloplasmin fold, cuppe | 87.19 | |
| 1sdd_B | 647 | Coagulation factor V; copper-binding protein, cofa | 87.19 | |
| 1t1d_A | 100 | Protein (potassium channel KV1.1); potassium chann | 87.04 | |
| 4b1m_A | 185 | Levanase; hydrolase, CBM66; HET: FRU; 1.10A {Bacil | 84.32 | |
| 3ues_A | 478 | Alpha-1,3/4-fucosidase; TIM barrel, hydrolase-hydr | 83.79 | |
| 2wn3_A | 254 | Discoidin-1 subunit A; type-H lectin, cell adhesio | 83.05 | |
| 1oq1_A | 223 | Protein YESU; structural genomics, singleton, PSI, | 82.12 |
| >3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-40 Score=351.86 Aligned_cols=253 Identities=17% Similarity=0.263 Sum_probs=229.8
Q ss_pred cCCCCcchHHHHHHhhhcCCCceeEEEEEc---CeeeEEEeeHHHHhcCCHHHHHhhcCCCCCCCcceEEeC------CC
Q 040529 326 VFPFGLPINSQRLKQLASNCEYADVNIYVE---SHGLVAQSHKIILSLWSVPFAKMFTNGMSESYSSDVHLR------DV 396 (806)
Q Consensus 326 ~~~~~~~~~l~~l~~l~~~~~~sDV~l~v~---~~~~~~~aHr~ILaa~S~yF~~mf~~~~~Es~~~~I~l~------~v 396 (806)
..+.+...+++.|++++.++.+|||+|.++ |+ .|+|||.||+++|+||++||+++|.|+...+|.++ ++
T Consensus 11 ~~~~h~~~ll~~l~~l~~~~~~~Dv~l~v~~~~~~--~f~~Hr~vLaa~S~yF~~mf~~~~~e~~~~~i~l~~~~~~~~v 88 (279)
T 3i3n_A 11 ECSSHCSELSWRQNEQRRQGLFCDITLCFGGAGGR--EFRAHRSVLAAATEYFTPLLSGQFSESRSGRVEMRKWSSEPGP 88 (279)
T ss_dssp ECTTHHHHHHHHHHHHHHHTTTCCEEEECC----C--EEEECHHHHHHHCTTSGGGCCC--------EEECCCCSSTTCS
T ss_pred CCHhHHHHHHHHHHHHHhcCCCCCeEEEEcCCCCe--EEehHHHHHHHcCHHHHHHhcCCCccccCCeEEeccccccCCC
Confidence 345566778899999999999999999998 54 59999999999999999999999999999999998 89
Q ss_pred CHHHHHHHHhHHhcCccccCCCCchhHHHHHHHHHHHhhCchHHHHHHHHHHhhcCCCCCcHHHHHHHhhhcCCHHHHHH
Q 040529 397 SLKAFKIMLEFMYSGELNIEDSLDFGSLLLQLLILSDQFGVTLLHQECCKLLLECFSEDSVCPILQVVTPISSCKLIEET 476 (806)
Q Consensus 397 ~~~~f~~lL~fiYtg~l~i~~~~n~~~~v~~Ll~~A~~l~l~~L~~~c~~~L~~~l~~~n~~~~l~~~a~~~~~~~L~~~ 476 (806)
++++|+.+|+|+|||++.++. ++ +.+++.+|++|+++.|++.|+++|.+.++++| |..++.+|..|++..|.+.
T Consensus 89 ~~~~f~~ll~~~Ytg~~~i~~-~~----v~~ll~~A~~l~i~~L~~~c~~~L~~~l~~~n-~~~i~~~A~~~~~~~L~~~ 162 (279)
T 3i3n_A 89 EPDTVEAVIEYMYTGRIRVST-GS----VHEVLELADRFLLIRLKEFCGEFLKKKLHLSN-CVAIHSLAHMYTLSQLALK 162 (279)
T ss_dssp CHHHHHHHHHHHHHSEEEEET-TT----HHHHHHHHHHTTCHHHHHHHHHHHHHHCCTTT-HHHHHHHHHHTTCHHHHHH
T ss_pred CHHHHHHHHHhhCcCCcccCH-HH----HHHHHHHHHHHCcHHHHHHHHHHHHHcCCcch-HHHHHHHHHHcCcHHHHHH
Confidence 999999999999999999886 55 99999999999999999999999999999999 9999999999999999999
Q ss_pred HHHHHHhchhhhhccccccccCCHHHHHhhccCCCCCCCCHHHHHHHHHHHHhccccccCcchhhHHHhhcCchhhHHHH
Q 040529 477 CERKFALHFDYCTTASLDFVFLDEATFSSIIRHPDLTVTSEERVLNAILMWGMKAKELCGWEEMDELIIKLTPELVFEER 556 (806)
Q Consensus 477 ~~~~I~~nf~~l~~~~~~F~~L~~~~l~~IL~sd~L~V~sE~~v~~avl~Wi~~~~~~~~w~~~~~~l~~~~p~~~~~~r 556 (806)
|.+||..||.++ ..+++|.+|+.+.+..||++++|+|.+|.+||+++++|+++++ +.|
T Consensus 163 ~~~~i~~~f~~v-~~~~~f~~L~~~~l~~lL~~d~L~v~sE~~vf~av~~W~~~~~---------------------~~r 220 (279)
T 3i3n_A 163 AADMIRRNFHKV-IQDEEFYTLPFHLIRDWLSDLEITVDSEEVLFETVLKWVQRNA---------------------EER 220 (279)
T ss_dssp HHHHHHHTHHHH-TTSSGGGGSCHHHHHHHHTCSSCCCSCHHHHHHHHHHHHHTTH---------------------HHH
T ss_pred HHHHHHHHHHHH-hcCcChhcCCHHHHHHHhcCcCCCCCCHHHHHHHHHHHHHcCH---------------------HHH
Confidence 999999999999 8999999999999999999999999999999999999999985 678
Q ss_pred HHhHhhccccccccccChHHHhh-cccccccccchhHHHHHHHHHHHHhcCCC
Q 040529 557 LQSVNYLLPFVRFPLLPHALLKK-MENSCLNRQIPIFDNLVKEAIIFIESGLA 608 (806)
Q Consensus 557 ~~~l~~Ll~~IRf~lls~~~L~~-v~~~~l~~~~~~~~~~l~ea~~~~~~~~~ 608 (806)
.+++..||++||||+|++.+|.. +..++++...+.|++++.+|++||..+..
T Consensus 221 ~~~~~~ll~~VRf~l~~~~~L~~~v~~~~l~~~~~~c~~~l~ea~~~~~~~~e 273 (279)
T 3i3n_A 221 ERYFEELFKLLRLSQMKPTYLTRHVKPERLVANNEVCVKLVADAVERHALRAE 273 (279)
T ss_dssp TTTHHHHHTTSCGGGSCHHHHHHTTTTSHHHHTCHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhcCCCCCCHHHHHHHhhccchhcCCHHHHHHHHHHHHhccCchh
Confidence 89999999999999999998864 88899999999999999999999988654
|
| >3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B | Back alignment and structure |
|---|
| >3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens} | Back alignment and structure |
|---|
| >3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A | Back alignment and structure |
|---|
| >4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
| >2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A | Back alignment and structure |
|---|
| >2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus} | Back alignment and structure |
|---|
| >1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A | Back alignment and structure |
|---|
| >2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens} | Back alignment and structure |
|---|
| >2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
| >3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens} | Back alignment and structure |
|---|
| >2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus} | Back alignment and structure |
|---|
| >1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A | Back alignment and structure |
|---|
| >1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A | Back alignment and structure |
|---|
| >2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
| >3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens} | Back alignment and structure |
|---|
| >2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A | Back alignment and structure |
|---|
| >1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A | Back alignment and structure |
|---|
| >2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
| >2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus} | Back alignment and structure |
|---|
| >3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A | Back alignment and structure |
|---|
| >2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus} | Back alignment and structure |
|---|
| >2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A | Back alignment and structure |
|---|
| >2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A | Back alignment and structure |
|---|
| >3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0 | Back alignment and structure |
|---|
| >2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens} | Back alignment and structure |
|---|
| >3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
| >2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
| >3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
| >3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A | Back alignment and structure |
|---|
| >2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens} | Back alignment and structure |
|---|
| >3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens} | Back alignment and structure |
|---|
| >3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A | Back alignment and structure |
|---|
| >2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens} | Back alignment and structure |
|---|
| >3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0 | Back alignment and structure |
|---|
| >3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A | Back alignment and structure |
|---|
| >3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A | Back alignment and structure |
|---|
| >4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
| >3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B | Back alignment and structure |
|---|
| >3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A | Back alignment and structure |
|---|
| >2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E* | Back alignment and structure |
|---|
| >1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D | Back alignment and structure |
|---|
| >2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A* | Back alignment and structure |
|---|
| >4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E* | Back alignment and structure |
|---|
| >1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D | Back alignment and structure |
|---|
| >2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A* | Back alignment and structure |
|---|
| >1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1 | Back alignment and structure |
|---|
| >3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A* | Back alignment and structure |
|---|
| >2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B | Back alignment and structure |
|---|
| >2j1a_A Hyaluronidase, CBM32; protein-carbohydrate interaction, glycoside hydrolase, GH84C, hydrolase; HET: GAL; 1.49A {Clostridium perfringens} PDB: 2j1e_A* 2j7m_A* | Back alignment and structure |
|---|
| >3f2z_A Uncharacterized protein BF3579; the present C-terminal domain is predominantly composed of B strands., structural genomics, PSI-2; 1.30A {Bacteroides fragilis} PDB: 2kd7_A | Back alignment and structure |
|---|
| >3ggl_A Putative chitobiase; X-RAY, structure genomics, NESG, BTR324A, Q8A9F0_bactn, BT_0865, PSI-2, protein structure initiative; 3.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
| >3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens} | Back alignment and structure |
|---|
| >2jda_A Yecbm32; hypothetical protein, carbohydrate- binding module, sugar-binding protein, pectin, plant cell WALL, galacturonic acid; 1.35A {Yersinia enterocolitica} PDB: 2jd9_A | Back alignment and structure |
|---|
| >2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* | Back alignment and structure |
|---|
| >4a41_A GH89_CBM32-5, alpha-N-acetylglucosaminidase family protein; hydrolase, family 89 glycoside hydrolase, family 32 carbohyd binding module; HET: GAL; 1.55A {Clostridium perfringens} PDB: 4a44_A* 4a45_A* 4aax_A* | Back alignment and structure |
|---|
| >2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} | Back alignment and structure |
|---|
| >4gwi_A Lectinolysin, platelet aggregation factor SM-HPAF; cholesterol-dependent cytolysins, lewis antigens, F-type LEC glycan binding; HET: BDZ; 1.60A {Streptococcus mitis} PDB: 4gwj_A* 3lei_A* 3leg_A* 3le0_A* 3lek_A* | Back alignment and structure |
|---|
| >2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} | Back alignment and structure |
|---|
| >2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens} | Back alignment and structure |
|---|
| >2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens} | Back alignment and structure |
|---|
| >3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} | Back alignment and structure |
|---|
| >1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A | Back alignment and structure |
|---|
| >1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1 | Back alignment and structure |
|---|
| >3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens} | Back alignment and structure |
|---|
| >4a3z_A GH89_CBM32, alpha-N-acetylglucosaminidase family protein; hydrolase, family 32 carbohydrate-binding module; HET: MSE; 1.55A {Clostridium perfringens} PDB: 4a6o_A* | Back alignment and structure |
|---|
| >1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A | Back alignment and structure |
|---|
| >3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A* | Back alignment and structure |
|---|
| >4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} | Back alignment and structure |
|---|
| >2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B | Back alignment and structure |
|---|
| >3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens} | Back alignment and structure |
|---|
| >2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} | Back alignment and structure |
|---|
| >2yfu_A Carbohydrate binding family 6; sugar binding protein; 1.65A {Clostridium thermocellum} PDB: 2y8j_A* 2y9i_A* 2y9s_A 2yb7_A* 2y8m_A 2yfz_A* 2yg0_A* | Back alignment and structure |
|---|
| >4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens} | Back alignment and structure |
|---|
| >4a42_A GH89_CBM32-4, alpha-N-acetylglucosaminidase family protein; hydrolase, family 89 glycoside hydrolase, family 32 carbohyd binding module; HET: MSE; 1.55A {Clostridium perfringens} | Back alignment and structure |
|---|
| >1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1 | Back alignment and structure |
|---|
| >2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus} | Back alignment and structure |
|---|
| >3hnm_A Putative chitobiase; PSI-2, protein structure initiative, northeast structural genomics consortium, NESG, BTR319D.BT_411; 3.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
| >4a4a_A Alpha-N-acetylglucosaminidase family protein; hydrolase, 2 hydrolase, family 89 glycoside hydrolase, mucin carbohydrate-active enzyme; HET: NDG GAL; 1.90A {Clostridium perfringens} PDB: 2vcc_A 2vc9_A* 2vcb_A* 2vca_A | Back alignment and structure |
|---|
| >2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} | Back alignment and structure |
|---|
| >2wuh_A Discoidin domain receptor 2; receptor-peptide complex, transferase, nucleotide-binding, tyrosine-protein kinase; 1.60A {Homo sapiens} PDB: 2z4f_A | Back alignment and structure |
|---|
| >3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A | Back alignment and structure |
|---|
| >2v5d_A O-GLCNACASE NAGJ; family 32 carbohydrate binding module, glycosidase, GH84, GH84C, CBM32, hydrolase, coiled coil; 3.30A {Clostridium perfringens} | Back alignment and structure |
|---|
| >1k12_A Lectin; beta barrel, protein carbohydrate complex, sugar binding protein; HET: FUC; 1.90A {Anguilla anguilla} SCOP: b.18.1.15 | Back alignment and structure |
|---|
| >2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A* | Back alignment and structure |
|---|
| >3bn6_A Lactadherin; anticoagulation, anti-coagulation, anticoagulant, anti- coagulant, membrane binding, phosphatidyl-serine binding; 1.67A {Bos taurus} PDB: 2pqs_A | Back alignment and structure |
|---|
| >2v72_A CBM32, EXO-alpha-sialidase; galactose, bacterial pathogen, carbohydrate-binding module, sugar-binding protein; HET: GAL; 2.25A {Clostridium perfringens} | Back alignment and structure |
|---|
| >3lei_A Platelet aggregation factor SM-HPAF; lectin domain of lectinolysin, fucose, blood clotting, nicke; HET: FUC; 1.90A {Streptococcus mitis} PDB: 3leg_A* 3le0_A* 3lek_A* | Back alignment and structure |
|---|
| >1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A* | Back alignment and structure |
|---|
| >3hny_M Coagulation factor VIII; blood clotting, acute phase, blood coagulation, calcium, DIS mutation, disulfide bond, glycoprotein, hemophilia; 1.07A {Homo sapiens} SCOP: b.18.1.2 PDB: 3hnb_M 3hob_M 1d7p_M 1iqd_C 1cfg_A 1fac_A | Back alignment and structure |
|---|
| >1czt_A Protein (coagulation factor V); membrane-binding, discoidin family, calcium- independent, blood clotting; 1.87A {Homo sapiens} SCOP: b.18.1.2 PDB: 1czs_A 1czv_A | Back alignment and structure |
|---|
| >4deq_A Neuropilin-1, vascular endothelial growth factor; coagulation factor domain, heparin binding domain, angiogene protein binding-cytokine complex; 2.65A {Homo sapiens} PDB: 1kmx_A 1vgh_A 2vgh_A | Back alignment and structure |
|---|
| >2j1v_A Fucolectin-related protein; carbohydrate-binding protein, carbohydrate binding protein; HET: NAG GAL FUC; 1.45A {Streptococcus pneumoniae} PDB: 2j1r_A* 2j1t_A* 2j1u_A* 2j1s_A* | Back alignment and structure |
|---|
| >1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A | Back alignment and structure |
|---|
| >2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli} | Back alignment and structure |
|---|
| >2j22_A Fucolectin-related protein; carbohydrate-binding protein, carbohydrate binding protein; 1.8A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
| >1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A | Back alignment and structure |
|---|
| >1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1 | Back alignment and structure |
|---|
| >2w1s_A Hyaluronoglucosaminidase; hexosaminidase, family 32 carbohydrate binding module, toxin, secreted, virulence, hydrolase, glycosidase; HET: MSE BTB; 1.45A {Clostridium perfringens} PDB: 2w1q_A* 2w1u_A* 2wdb_A* | Back alignment and structure |
|---|
| >2qqi_A Neuropilin-1; VEGF receptor, semaphorin receptor, angiogenesis, developmen protein, differentiation, glycoprotein, heparan sulfate, ME neurogenesis; 1.80A {Homo sapiens} SCOP: b.18.1.2 b.18.1.2 PDB: 2orz_A 2orx_A 2qqn_A 3i97_A* 1kex_A | Back alignment and structure |
|---|
| >2qqj_A Neuropilin-2; VEGF receptor, semaphorin receptor, developmental protein, differentiation, glycoprotein, membrane, neurogenesis, transmembrane; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
| >2qqj_A Neuropilin-2; VEGF receptor, semaphorin receptor, developmental protein, differentiation, glycoprotein, membrane, neurogenesis, transmembrane; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
| >2qqi_A Neuropilin-1; VEGF receptor, semaphorin receptor, angiogenesis, developmen protein, differentiation, glycoprotein, heparan sulfate, ME neurogenesis; 1.80A {Homo sapiens} SCOP: b.18.1.2 b.18.1.2 PDB: 2orz_A 2orx_A 2qqn_A 3i97_A* 1kex_A | Back alignment and structure |
|---|
| >3cqo_A FBP32; F-lectin, fucolectin, sugar binding protein; HET: FUC; 2.32A {Morone saxatilis} | Back alignment and structure |
|---|
| >4ag4_A Epithelial discoidin domain-containing receptor 1; immune system-transferase complex; HET: NAG; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
| >2vm9_A Discoidin-2, discoidin II; DDR, lectin, aggregation, cell adhesion; 1.75A {Dictyostelium discoideum} PDB: 2vmc_A* 2vmd_A* 2vme_A* | Back alignment and structure |
|---|
| >3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A | Back alignment and structure |
|---|
| >3cqo_A FBP32; F-lectin, fucolectin, sugar binding protein; HET: FUC; 2.32A {Morone saxatilis} | Back alignment and structure |
|---|
| >1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2 | Back alignment and structure |
|---|
| >3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2 | Back alignment and structure |
|---|
| >2qqm_A Neuropilin-1; VEGF receptor, semaphorin receptor, calcium-binding domain, angiogenesis, developmental protein, differentiation; HET: NAG FUC; 2.00A {Homo sapiens} SCOP: b.18.1.2 b.18.1.2 b.23.1.1 | Back alignment and structure |
|---|
| >1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2 | Back alignment and structure |
|---|
| >2yc2_A IFT25, intraflagellar transport protein 25; transport protein, cilium, IFT complex; 2.59A {Chlamydomonas reinhardtii} PDB: 2yc4_A | Back alignment and structure |
|---|
| >2qqo_A Neuropilin-2; VEGF receptor, semaphorin receptor, calcium-binding domain, developmental protein, differentiation, glycoprotein, membr neurogenesis; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
| >3eyp_A Putative alpha-L-fucosidase; structural genomics, hydrolase, lipoprotein, PSI-2, protein initiative; 1.90A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
| >4gz9_A Neuropilin-1, A5 protein; multi-domain, cell-CELL signaling, plexin, semaphorin, VEGF, glycosilated, transmembrane, signaling protein; HET: NAG BMA; 2.70A {Mus musculus} PDB: 4gza_H | Back alignment and structure |
|---|
| >1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A | Back alignment and structure |
|---|
| >2qqm_A Neuropilin-1; VEGF receptor, semaphorin receptor, calcium-binding domain, angiogenesis, developmental protein, differentiation; HET: NAG FUC; 2.00A {Homo sapiens} SCOP: b.18.1.2 b.18.1.2 b.23.1.1 | Back alignment and structure |
|---|
| >2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A | Back alignment and structure |
|---|
| >2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A | Back alignment and structure |
|---|
| >2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B* | Back alignment and structure |
|---|
| >1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2 | Back alignment and structure |
|---|
| >2qqo_A Neuropilin-2; VEGF receptor, semaphorin receptor, calcium-binding domain, developmental protein, differentiation, glycoprotein, membr neurogenesis; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
| >2qqk_A Neuropilin-2; VEGF receptor, semaphorin receptor, phage-derived antibody, developmental protein, differentiation, glycoprotein; HET: NAG; 2.75A {Homo sapiens} PDB: 2qql_A | Back alignment and structure |
|---|
| >4gz9_A Neuropilin-1, A5 protein; multi-domain, cell-CELL signaling, plexin, semaphorin, VEGF, glycosilated, transmembrane, signaling protein; HET: NAG BMA; 2.70A {Mus musculus} PDB: 4gza_H | Back alignment and structure |
|---|
| >1tvg_A LOC51668 protein; cell cycle, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 1.60A {Homo sapiens} SCOP: b.18.1.9 PDB: 1xpw_A | Back alignment and structure |
|---|
| >1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2 | Back alignment and structure |
|---|
| >2zxq_A Endo-alpha-N-acetylgalactosaminidase; broken TIM barrel, glycosidase, hydrolase; 2.00A {Bifidobacterium longum} | Back alignment and structure |
|---|
| >2qqk_A Neuropilin-2; VEGF receptor, semaphorin receptor, phage-derived antibody, developmental protein, differentiation, glycoprotein; HET: NAG; 2.75A {Homo sapiens} PDB: 2qql_A | Back alignment and structure |
|---|
| >3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2 | Back alignment and structure |
|---|
| >1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2 | Back alignment and structure |
|---|
| >2cho_A Glucosaminidase, hexosaminiase; O-GLCNACASE, hydrolase, N-acetylglucosamine; 1.85A {Bacteroides thetaiotaomicron} SCOP: a.246.1.1 c.1.8.10 d.92.2.3 PDB: 2chn_A 2vvn_A* 2vvs_A* 2x0h_A* 2xm2_A* 2w4x_A* 2w66_A* 2w67_A* 2wca_A* 2xj7_A* 2xm1_A* 2j47_A* 2jiw_A* 2wzh_A* 2wzi_A* 2j4g_A* | Back alignment and structure |
|---|
| >2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B* | Back alignment and structure |
|---|
| >1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2 | Back alignment and structure |
|---|
| >1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A | Back alignment and structure |
|---|
| >4b1m_A Levanase; hydrolase, CBM66; HET: FRU; 1.10A {Bacillus subtilis} PDB: 4b1l_A* 4azz_A | Back alignment and structure |
|---|
| >3ues_A Alpha-1,3/4-fucosidase; TIM barrel, hydrolase-hydrolase inhibitor complex; HET: DFU; 1.60A {Bifidobacterium longum subsp} PDB: 3mo4_A* 3uet_A* | Back alignment and structure |
|---|
| >2wn3_A Discoidin-1 subunit A; type-H lectin, cell adhesion, discoidin domain, lectin; HET: NGA GAL 1PG; 1.59A {Dictyostelium discoideum} PDB: 2w94_A* 2wn2_A* 2w95_A* | Back alignment and structure |
|---|
| >1oq1_A Protein YESU; structural genomics, singleton, PSI, protein structure initi midwest center for structural genomics, MCSG, unknown funct; 1.70A {Bacillus subtilis} SCOP: b.29.1.17 | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 806 | ||||
| d1r29a_ | 122 | d.42.1.1 (A:) B-cell lymphoma 6 (Bcl6) protein BTB | 5e-12 | |
| d1r29a_ | 122 | d.42.1.1 (A:) B-cell lymphoma 6 (Bcl6) protein BTB | 2e-07 | |
| d1buoa_ | 121 | d.42.1.1 (A:) Promyelocytic leukaemia zinc finger | 1e-09 | |
| d1buoa_ | 121 | d.42.1.1 (A:) Promyelocytic leukaemia zinc finger | 4e-09 | |
| d1w8oa2 | 142 | b.18.1.1 (A:506-647) Sialidase, C-terminal domain | 2e-07 | |
| d1sddb3 | 162 | b.18.1.2 (B:1863-2024) C2 domain of factor V {Cow | 2e-06 | |
| d1k3ia2 | 162 | b.18.1.1 (A:-12-150) Galactose oxidase, N-terminal | 3e-05 | |
| d2qqia2 | 155 | b.18.1.2 (A:273-427) B1 domain of neuropilin-1 {Hu | 4e-05 | |
| d1d7pm_ | 159 | b.18.1.2 (M:) C2 domain of factor VIII {Human (Hom | 1e-04 |
| >d1r29a_ d.42.1.1 (A:) B-cell lymphoma 6 (Bcl6) protein BTB domain {Human (Homo sapiens) [TaxId: 9606]} Length = 122 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: POZ domain superfamily: POZ domain family: BTB/POZ domain domain: B-cell lymphoma 6 (Bcl6) protein BTB domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 61.3 bits (148), Expect = 5e-12
Identities = 26/113 (23%), Positives = 48/113 (42%), Gaps = 7/113 (6%)
Query: 336 QRLKQLASNCEYADVNIYVESHGLVAQSHKIILSLWSVPFAKMFTNGMSESYSSDVHLRD 395
L +L S DV I V A HK +L S F +FT+ + + S +
Sbjct: 14 LNLNRLRSRDILTDVVIVVSREQFRA--HKTVLMACSGLFYSIFTDQLKRNLSVINLDPE 71
Query: 396 VSLKAFKIMLEFMYSGELNIEDSLDFGSLLLQLLILSDQFGVTLLHQECCKLL 448
++ + F I+L+FMY+ LN+ + + ++ + + + C K +
Sbjct: 72 INPEGFNILLDFMYTSRLNLREGNI-----MAVMATAMYLQMEHVVDTCRKFI 119
|
| >d1r29a_ d.42.1.1 (A:) B-cell lymphoma 6 (Bcl6) protein BTB domain {Human (Homo sapiens) [TaxId: 9606]} Length = 122 | Back information, alignment and structure |
|---|
| >d1buoa_ d.42.1.1 (A:) Promyelocytic leukaemia zinc finger (PLZF) protein BTB domain {Human (Homo sapiens) [TaxId: 9606]} Length = 121 | Back information, alignment and structure |
|---|
| >d1buoa_ d.42.1.1 (A:) Promyelocytic leukaemia zinc finger (PLZF) protein BTB domain {Human (Homo sapiens) [TaxId: 9606]} Length = 121 | Back information, alignment and structure |
|---|
| >d1w8oa2 b.18.1.1 (A:506-647) Sialidase, C-terminal domain {Micromonospora viridifaciens [TaxId: 1881]} Length = 142 | Back information, alignment and structure |
|---|
| >d1sddb3 b.18.1.2 (B:1863-2024) C2 domain of factor V {Cow (Bos taurus) [TaxId: 9913]} Length = 162 | Back information, alignment and structure |
|---|
| >d1k3ia2 b.18.1.1 (A:-12-150) Galactose oxidase, N-terminal domain {Fungi (Fusarium sp.) [TaxId: 29916]} Length = 162 | Back information, alignment and structure |
|---|
| >d2qqia2 b.18.1.2 (A:273-427) B1 domain of neuropilin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 155 | Back information, alignment and structure |
|---|
| >d1d7pm_ b.18.1.2 (M:) C2 domain of factor VIII {Human (Homo sapiens) [TaxId: 9606]} Length = 159 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 806 | |||
| d1r29a_ | 122 | B-cell lymphoma 6 (Bcl6) protein BTB domain {Human | 99.85 | |
| d1buoa_ | 121 | Promyelocytic leukaemia zinc finger (PLZF) protein | 99.84 | |
| d1buoa_ | 121 | Promyelocytic leukaemia zinc finger (PLZF) protein | 99.83 | |
| d1r29a_ | 122 | B-cell lymphoma 6 (Bcl6) protein BTB domain {Human | 99.8 | |
| d1w8oa2 | 142 | Sialidase, C-terminal domain {Micromonospora virid | 98.12 | |
| d1k12a_ | 158 | Fucose binding lectin {European eel (Anguilla angu | 97.92 | |
| d1k3ia2 | 162 | Galactose oxidase, N-terminal domain {Fungi (Fusar | 97.58 | |
| d1jhja_ | 161 | APC10/DOC1 subunit of the anaphase-promoting compl | 97.21 | |
| d2c9wc1 | 96 | Elongin C {Human (Homo sapiens) [TaxId: 9606]} | 97.19 | |
| d1hv2a_ | 99 | Elongin C {Baker's yeast (Saccharomyces cerevisiae | 97.04 | |
| d2qqia1 | 156 | C2 domain of factor VIII {Human (Homo sapiens) [Ta | 96.48 | |
| d1zgka1 | 288 | Kelch-like ECH-associated protein 1, KEAP1 {Human | 96.41 | |
| d1nn7a_ | 105 | Potassium channel kv4.2 {Rat (Rattus norvegicus) [ | 96.19 | |
| d3kvta_ | 103 | akv3.1 voltage-gated potassium channel {California | 96.11 | |
| d1tvga_ | 136 | Placental protein 25, pp25 {Human (Homo sapiens) [ | 95.75 | |
| d1sddb3 | 162 | C2 domain of factor V {Cow (Bos taurus) [TaxId: 99 | 95.54 | |
| d1zgka1 | 288 | Kelch-like ECH-associated protein 1, KEAP1 {Human | 95.46 | |
| d1k3ia3 | 387 | Galactose oxidase, central domain {Fungi (Fusarium | 95.41 | |
| d1czsa_ | 160 | C2 domain of factor V {Human (Homo sapiens) [TaxId | 95.29 | |
| d3kvta_ | 103 | akv3.1 voltage-gated potassium channel {California | 95.12 | |
| d2qqia2 | 155 | B1 domain of neuropilin-1 {Human (Homo sapiens) [T | 94.84 | |
| d1d7pm_ | 159 | C2 domain of factor VIII {Human (Homo sapiens) [Ta | 94.71 | |
| d1gqpa_ | 194 | APC10/DOC1 subunit of the anaphase-promoting compl | 94.7 | |
| d1nn7a_ | 105 | Potassium channel kv4.2 {Rat (Rattus norvegicus) [ | 94.62 | |
| d1t1da_ | 100 | Shaker potassium channel {California sea hare (Apl | 94.52 | |
| d1k3ia3 | 387 | Galactose oxidase, central domain {Fungi (Fusarium | 93.85 | |
| d2c9wc1 | 96 | Elongin C {Human (Homo sapiens) [TaxId: 9606]} | 93.75 | |
| d1hv2a_ | 99 | Elongin C {Baker's yeast (Saccharomyces cerevisiae | 93.47 | |
| d1nexa2 | 72 | Centromere DNA-binding protein complex Cbf3 subuni | 88.84 | |
| d1t1da_ | 100 | Shaker potassium channel {California sea hare (Apl | 88.14 | |
| d1fs1b1 | 55 | Cyclin A/CDK2-associated p45, Skp1 {Human (Homo sa | 88.0 | |
| d1fs1b2 | 61 | Cyclin A/CDK2-associated p45, Skp1 {Human (Homo sa | 87.31 | |
| d1nexa1 | 70 | Centromere DNA-binding protein complex Cbf3 subuni | 83.35 | |
| d1fs1b2 | 61 | Cyclin A/CDK2-associated p45, Skp1 {Human (Homo sa | 80.29 |
| >d1r29a_ d.42.1.1 (A:) B-cell lymphoma 6 (Bcl6) protein BTB domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: POZ domain superfamily: POZ domain family: BTB/POZ domain domain: B-cell lymphoma 6 (Bcl6) protein BTB domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.85 E-value=2.1e-21 Score=177.32 Aligned_cols=118 Identities=22% Similarity=0.312 Sum_probs=109.1
Q ss_pred cCCCCcchHHHHHHhhhcCCCceeEEEEEcCeeeEEEeeHHHHhcCCHHHHHhhcCCCCCCCcceEEeCCCCHHHHHHHH
Q 040529 326 VFPFGLPINSQRLKQLASNCEYADVNIYVESHGLVAQSHKIILSLWSVPFAKMFTNGMSESYSSDVHLRDVSLKAFKIML 405 (806)
Q Consensus 326 ~~~~~~~~~l~~l~~l~~~~~~sDV~l~v~~~~~~~~aHr~ILaa~S~yF~~mf~~~~~Es~~~~I~l~~v~~~~f~~lL 405 (806)
.++.|...+++.|++++.++.+|||+|.++|+. |+|||+||+++|+||++||.+++.|+....+.++++++++|+.+|
T Consensus 4 ~~~~h~~~ll~~l~~l~~~~~~~Dv~l~v~~~~--~~~Hk~vLa~~S~~F~~~f~~~~~e~~~~~~~~~~v~~~~f~~ll 81 (122)
T d1r29a_ 4 QFTRHASDVLLNLNRLRSRDILTDVVIVVSREQ--FRAHKTVLMACSGLFYSIFTDQLKRNLSVINLDPEINPEGFNILL 81 (122)
T ss_dssp CCTTHHHHHHHHHHHHHHTTCSCCEEEEETTEE--EEECHHHHHHHCHHHHHHHTSTTTTTCSEEECCTTSCHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHhcCCCeEEEEEECCEE--EEEehHHhhhCCHHHHHHhccchhhhcceeeeecccCHHHHHHHH
Confidence 355667888999999999999999999999975 999999999999999999999999988888888899999999999
Q ss_pred hHHhcCccccCCCCchhHHHHHHHHHHHhhCchHHHHHHHHHHhh
Q 040529 406 EFMYSGELNIEDSLDFGSLLLQLLILSDQFGVTLLHQECCKLLLE 450 (806)
Q Consensus 406 ~fiYtg~l~i~~~~n~~~~v~~Ll~~A~~l~l~~L~~~c~~~L~~ 450 (806)
+|+|||++.++. ++ +.+++.+|++|+++.|++.|.+||..
T Consensus 82 ~~~Ytg~~~i~~-~~----v~~ll~~A~~l~i~~L~~~C~~~L~~ 121 (122)
T d1r29a_ 82 DFMYTSRLNLRE-GN----IMAVMATAMYLQMEHVVDTCRKFIKA 121 (122)
T ss_dssp HHHHHSCCCCCT-TT----HHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred hhhcCCeecCch-hh----HHHHHHHHHHHCcHHHHHHHHHHHHh
Confidence 999999999876 55 99999999999999999999999975
|
| >d1buoa_ d.42.1.1 (A:) Promyelocytic leukaemia zinc finger (PLZF) protein BTB domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1buoa_ d.42.1.1 (A:) Promyelocytic leukaemia zinc finger (PLZF) protein BTB domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1r29a_ d.42.1.1 (A:) B-cell lymphoma 6 (Bcl6) protein BTB domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1w8oa2 b.18.1.1 (A:506-647) Sialidase, C-terminal domain {Micromonospora viridifaciens [TaxId: 1881]} | Back information, alignment and structure |
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| >d1k12a_ b.18.1.15 (A:) Fucose binding lectin {European eel (Anguilla anguilla) [TaxId: 7936]} | Back information, alignment and structure |
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| >d1jhja_ b.18.1.9 (A:) APC10/DOC1 subunit of the anaphase-promoting complex {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d2c9wc1 d.42.1.1 (C:17-112) Elongin C {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1hv2a_ d.42.1.1 (A:) Elongin C {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
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| >d2qqia1 b.18.1.2 (A:431-586) C2 domain of factor VIII {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1nn7a_ d.42.1.2 (A:) Potassium channel kv4.2 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
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| >d3kvta_ d.42.1.2 (A:) akv3.1 voltage-gated potassium channel {California sea hare (Aplysia californica) [TaxId: 6500]} | Back information, alignment and structure |
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| >d1tvga_ b.18.1.9 (A:) Placental protein 25, pp25 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1sddb3 b.18.1.2 (B:1863-2024) C2 domain of factor V {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
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| >d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1, KEAP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} | Back information, alignment and structure |
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| >d1czsa_ b.18.1.2 (A:) C2 domain of factor V {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d3kvta_ d.42.1.2 (A:) akv3.1 voltage-gated potassium channel {California sea hare (Aplysia californica) [TaxId: 6500]} | Back information, alignment and structure |
|---|
| >d2qqia2 b.18.1.2 (A:273-427) B1 domain of neuropilin-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1d7pm_ b.18.1.2 (M:) C2 domain of factor VIII {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1gqpa_ b.18.1.9 (A:) APC10/DOC1 subunit of the anaphase-promoting complex {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
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| >d1nn7a_ d.42.1.2 (A:) Potassium channel kv4.2 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
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| >d1t1da_ d.42.1.2 (A:) Shaker potassium channel {California sea hare (Aplysia californica) [TaxId: 6500]} | Back information, alignment and structure |
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| >d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} | Back information, alignment and structure |
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| >d2c9wc1 d.42.1.1 (C:17-112) Elongin C {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1hv2a_ d.42.1.1 (A:) Elongin C {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
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| >d1nexa2 d.42.1.1 (A:4-103) Centromere DNA-binding protein complex Cbf3 subunit D, CBF3D {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
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| >d1t1da_ d.42.1.2 (A:) Shaker potassium channel {California sea hare (Aplysia californica) [TaxId: 6500]} | Back information, alignment and structure |
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| >d1fs1b1 a.157.1.1 (B:86-140) Cyclin A/CDK2-associated p45, Skp1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1fs1b2 d.42.1.1 (B:2-68) Cyclin A/CDK2-associated p45, Skp1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d1nexa1 a.157.1.1 (A:116-185) Centromere DNA-binding protein complex Cbf3 subunit D, CBF3D {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
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| >d1fs1b2 d.42.1.1 (B:2-68) Cyclin A/CDK2-associated p45, Skp1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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