Citrus Sinensis ID: 040548

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70-
Protein Sequence
MSSSCPAGKGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDHGIVTRVPRIG
Secondary Structure (PSIPRED)
cccccccccccccccccccHHHHHHHHHHHccccEEEEEcccccccccccccEEEEEEcccccEEEccccc
Secondary Structure Prediction (SSPRO)
ccccccccccEcHHHcccEHHHHHHHHHHHccccEEEEEEccccccccccccEEEEEEccccEEccccEEc
Coil and Loop (DISEMBL)
mssscpagkgswpelvgmngEAAAHIIMaenpkvgattvdenAIVTADFRCDRVRVFVNdhgivtrvprig
Flexible Loop (DISEMBL)
mssscpagkgswPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTadfrcdrvrvfvndhgivtrvprig
Low Complexity Region (SEG)
MSSSCPAGKGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDHGIVTRVPRIG
Disordered region (IsUnstruct)
**************LVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDHGIVTRV****
Disordered Region (DISOPRED)
******A****WPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDHGIVTRVPRIG
Disordered Region (DISEMBL)
**********SWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDHGIVTRVPRIG
Disordered Region (DISPRO)
********KGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDHGIVTRVPRIG
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSSSCPAGKGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDHGIVTRVPRIG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	71	2.2.26 [Sep-21-2011]
P19873	68	Inhibitor of trypsin and	N/A	no	0.957	1.0	0.550	2e-14
P24076	68	Glu S.griseus protease in	N/A	no	0.957	1.0	0.579	6e-14
P82381	69	Proteinase inhibitor OS=L	N/A	no	0.957	0.985	0.550	1e-13
Q6XNP7	70	Protease inhibitor HPI OS	N/A	no	0.985	1.0	0.535	2e-13
Q02214	94	Trypsin inhibitor 1 OS=Ni	N/A	no	0.985	0.744	0.458	4e-11
P20076	119	Ethylene-responsive prote	N/A	no	0.985	0.588	0.444	3e-10
Q03199	107	Proteinase inhibitor I-B	N/A	no	0.985	0.654	0.444	1e-09
P16231	111	Wound-induced proteinase	N/A	no	0.971	0.621	0.471	1e-09
Q03198	107	Proteinase inhibitor I-A	N/A	no	0.985	0.654	0.430	2e-09
P86971	86	Trypsin inhibitor OS=Fago	N/A	no	0.901	0.744	0.492	1e-08

>sp|P19873|ITH5_CUCMA Inhibitor of trypsin and hageman factor OS=Cucurbita maxima PE=1 SV=1

 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 38/69 (55%), Positives = 46/69 (66%), Gaps = 1/69 (1%)

Query: 3  SSCPAGKGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDHG 62
          SSCP GK SWP LVG+ G  A  II  +NP V A  ++E   VT DFRC+RVR++VN  G
Sbjct: 1  SSCP-GKSSWPHLVGVGGSVAKAIIERQNPNVKAVILEEGTPVTKDFRCNRVRIWVNKRG 59

Query: 63 IVTRVPRIG 71
          +V   PRIG
Sbjct: 60 LVVSPPRIG 68

Specifically inhibits both trypsin and activated Hageman factor.
Cucurbita maxima (taxid: 3661)

>sp|P24076|BGIA_MOMCH Glu S.griseus protease inhibitor OS=Momordica charantia PE=1 SV=1

 Score = 75.9 bits (185), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 40/69 (57%), Positives = 46/69 (66%), Gaps = 1/69 (1%)

Query: 3  SSCPAGKGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDHG 62
          S C  GK SWP+LVG  G AA  +I  ENP+V A  V   + VTADFRCDRVRV+V + G
Sbjct: 1  SQC-QGKRSWPQLVGSTGAAAKAVIERENPRVRAVIVRVGSPVTADFRCDRVRVWVTERG 59

Query: 63 IVTRVPRIG 71
          IV R P IG
Sbjct: 60 IVARPPAIG 68

Competitively inhibits Glu S.griseus protease by forming probably a 1:1 complex. BGIA has no inhibitory activity against 2 other acidic amino acid-specific endopeptidases (S.aureus protease V8 and B.subtilis proteinase), chymotrypsin, trypsin, pancreatic elastase, and papain, although subtilisin Carlsberg was strongly inhibited.

Momordica charantia (taxid: 3673)

>sp|P82381|ICI_LINUS Proteinase inhibitor OS=Linum usitatissimum PE=1 SV=1

 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 38/69 (55%), Positives = 45/69 (65%), Gaps = 1/69 (1%)

Query: 2  SSSCPAGKGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDH 61
          S  CP GK +WPELVG +G  AA  +  EN  V A  + E + +T DFRCDRV V VNDH
Sbjct: 1  SRRCP-GKNAWPELVGKSGNMAAATVERENRNVHAIVLKEGSAMTKDFRCDRVWVIVNDH 59

Query: 62 GIVTRVPRI 70
          G+VT VP I
Sbjct: 60 GVVTSVPHI 68

In vitro, strong inhibitor of bovine beta-trypsin, weak inhibitor of alpha-chymotrypsin, subtilisin BPN', subtilisin Carlsberg and cathepsin G.

Linum usitatissimum (taxid: 4006)

>sp|Q6XNP7|HPI_HEVBR Protease inhibitor HPI OS=Hevea brasiliensis GN=PI1 PE=1 SV=2

 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 38/71 (53%), Positives = 47/71 (66%), Gaps = 1/71 (1%)

Query: 1  MSSSCPAGKGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVND 60
          M+S CP  K SWPELVG NG+ AA II  EN  V A  V E   +T D   +RVRVFV++
Sbjct: 1  MASQCPV-KNSWPELVGTNGDIAAGIIQTENANVKAIVVKEGLPITQDLNFNRVRVFVDE 59

Query: 61 HGIVTRVPRIG 71
          + +VT+VP IG
Sbjct: 60 NRVVTQVPAIG 70

Inhibitor of serine proteases, strongly inhibits subtilisin A and weakly inhibits trypsin. Does not inhibit chymotrypsin, papain, pepsin, pronase E, protease type XIII and thermolysin. HPI-1 inhibits subtilisin A with an Ki of 0.21 nM. HPI-2a inhibits subtilisin A with an Ki of 0.08 nM. HPI-2b inhibits subtilisin A with an Ki of 0.1 nM.

Hevea brasiliensis (taxid: 3981)

>sp|Q02214|ITR1_NICSY Trypsin inhibitor 1 OS=Nicotiana sylvestris PE=2 SV=1

 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 33/72 (45%), Positives = 45/72 (62%), Gaps = 2/72 (2%)

Query: 2  SSSCPAGKG-SWPELVGMNGEAAAHIIMAENPKV-GATTVDENAIVTADFRCDRVRVFVN 59
           SSCP  K  +WPEL+G+  + A  II  EN K+    +V   + VT DFRC+RVR+FVN
Sbjct: 23 QSSCPGNKKETWPELIGVPAKFAREIIQKENSKLTNVPSVLNGSPVTKDFRCERVRLFVN 82

Query: 60 DHGIVTRVPRIG 71
              V ++PR+G
Sbjct: 83 VLDFVVQIPRVG 94

Stress response. Inhibits trypsin. May play a role in the reentering of protoplasts into the cell cycle.

Nicotiana sylvestris (taxid: 4096)

>sp|P20076|IER1_SOLLC Ethylene-responsive proteinase inhibitor 1 OS=Solanum lycopersicum PE=3 SV=1

 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 32/72 (44%), Positives = 42/72 (58%), Gaps = 2/72 (2%)

Query: 2   SSSCP-AGKGSWPELVGMNGEAAAHIIMAENPKV-GATTVDENAIVTADFRCDRVRVFVN 59
            S CP   K SWPEL+G   + A  II  ENPK+    T+   +  T D RC+RVR+FVN
Sbjct: 48  QSFCPGVTKESWPELLGTPAKFAKQIIQKENPKLTNVETLLNGSAFTEDLRCNRVRLFVN 107

Query: 60  DHGIVTRVPRIG 71
              IV + P++G
Sbjct: 108 LLDIVVQTPKVG 119

Solanum lycopersicum (taxid: 4081)

>sp|Q03199|IPIB_TOBAC Proteinase inhibitor I-B OS=Nicotiana tabacum GN=TIMPA PE=2 SV=1

 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 32/72 (44%), Positives = 40/72 (55%), Gaps = 2/72 (2%)

Query: 2   SSSCP-AGKGSWPELVGMNGEAAAHIIMAENPKV-GATTVDENAIVTADFRCDRVRVFVN 59
            S CP   K  WPEL+G   + A  II  ENPK+    TV     VT D RC+RVR+FVN
Sbjct: 36  QSGCPGVTKERWPELLGTPAKFAMQIIQKENPKLTNVQTVLNGTPVTEDLRCNRVRLFVN 95

Query: 60  DHGIVTRVPRIG 71
               V + P++G
Sbjct: 96  VLDFVVQTPQVG 107

Nicotiana tabacum (taxid: 4097)

>sp|P16231|ICI1_SOLPE Wound-induced proteinase inhibitor 1 OS=Solanum peruvianum PE=3 SV=1

 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 33/70 (47%), Positives = 42/70 (60%), Gaps = 1/70 (1%)

Query: 2   SSSCPAGKGSWPELVGMNGEAAAHIIMAENPKVGATTVDEN-AIVTADFRCDRVRVFVND 60
           S S   GK  WPEL+G+    A  II  ENP +    +  N + VT DFRCDRVR+FVN 
Sbjct: 41  SDSRCKGKQFWPELIGVPALYAKGIIEKENPSITNIPILLNGSPVTKDFRCDRVRLFVNI 100

Query: 61  HGIVTRVPRI 70
            G V ++PR+
Sbjct: 101 LGDVVQIPRV 110

Solanum peruvianum (taxid: 4082)

>sp|Q03198|IPIA_TOBAC Proteinase inhibitor I-A OS=Nicotiana tabacum GN=TIMPB PE=2 SV=1

 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 31/72 (43%), Positives = 40/72 (55%), Gaps = 2/72 (2%)

Query: 2   SSSCP-AGKGSWPELVGMNGEAAAHIIMAENPKV-GATTVDENAIVTADFRCDRVRVFVN 59
            S CP   K  WPEL+G   + A  II  ENPK+    T+     VT D RC+RVR+FVN
Sbjct: 36  QSGCPGVTKERWPELLGTPAKFAMQIIQKENPKLTNVQTILNGGPVTEDLRCNRVRLFVN 95

Query: 60  DHGIVTRVPRIG 71
               + + P+IG
Sbjct: 96  VLDFIVQTPQIG 107

Nicotiana tabacum (taxid: 4097)

>sp|P86971|ITI_FAGTA Trypsin inhibitor OS=Fagopyrum tataricum PE=1 SV=1

 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/69 (49%), Positives = 39/69 (56%), Gaps = 5/69 (7%)

Query: 8  GKGSWPELVGMNGEAAAHIIMAENPKVGAT----TVDENAIVTADFRCDRVRVFVND-HG 62
          GK SWPELVG  G+ AA  I  EN  V A          A  T DFRCDRVRV +N   G
Sbjct: 18 GKQSWPELVGTKGKTAAATIDKENTHVTAVLCPPLTTLAACRTFDFRCDRVRVLINRIGG 77

Query: 63 IVTRVPRIG 71
          +VT+ P +G
Sbjct: 78 VVTKTPTVG 86

Serine protease inhibitor which is active against trypsin. Displays strong antifungal activity against a number of phytopathogenic fungi including M.melonis, A.cucumerina, A.solani, C.glaeosporioides and P.capsici.

Fagopyrum tataricum (taxid: 62330)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	71
357487727	69	Trypsin inhibitor [Medicago truncatula]	0.957	0.985	0.666	6e-19
224117044	72	predicted protein [Populus trichocarpa]	1.0	0.986	0.638	1e-17
224093396	80	predicted protein [Populus trichocarpa]	1.0	0.887	0.625	2e-17
255551925	70	Glu S.griseus protease inhibitor, putati	0.915	0.928	0.676	1e-16
224114800	66	predicted protein [Populus trichocarpa]	0.915	0.984	0.661	1e-16
147823287	70	hypothetical protein VITISV_043736 [Viti	0.971	0.985	0.623	1e-16
255559973	72	Inhibitor of trypsin and hageman factor,	0.901	0.888	0.671	2e-16
297737186	70	unnamed protein product [Vitis vinifera]	0.971	0.985	0.608	3e-16
356576499	70	PREDICTED: glu S.griseus protease inhibi	0.985	1.0	0.619	2e-15
224086174	72	predicted protein [Populus trichocarpa]	0.985	0.972	0.563	3e-14

>gi|357487727|ref|XP_003614151.1| Trypsin inhibitor [Medicago truncatula] gi|355515486|gb|AES97109.1| Trypsin inhibitor [Medicago truncatula]

 Score = 98.2 bits (243), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 46/69 (66%), Positives = 57/69 (82%), Gaps = 1/69 (1%)

Query: 3  SSCPAGKGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDHG 62
          SSC  GK +WPELVG+NGEAAA IIM+EN  V A+T+ E+++ TADFRCDRVRVFV+   
Sbjct: 2  SSC-KGKKTWPELVGVNGEAAAQIIMSENSLVTASTLPEDSVFTADFRCDRVRVFVDKQD 60

Query: 63 IVTRVPRIG 71
          +VTRVP+IG
Sbjct: 61 VVTRVPKIG 69

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224117044|ref|XP_002317460.1| predicted protein [Populus trichocarpa] gi|222860525|gb|EEE98072.1| predicted protein [Populus trichocarpa]

 Score = 94.0 bits (232), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 46/72 (63%), Positives = 55/72 (76%), Gaps = 1/72 (1%)

Query: 1  MSSSCP-AGKGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVN 59
          M+  CP AGK SWPELVG+NGE AA II+ ENPKV A  V E  +VT DFRCDRVRV+V+
Sbjct: 1  MTDVCPDAGKSSWPELVGINGEVAAKIIVRENPKVRAGIVKEGMMVTMDFRCDRVRVWVD 60

Query: 60 DHGIVTRVPRIG 71
           +GIV  +P+IG
Sbjct: 61 KYGIVKDIPQIG 72

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224093396|ref|XP_002334836.1| predicted protein [Populus trichocarpa] gi|222875329|gb|EEF12460.1| predicted protein [Populus trichocarpa]

 Score = 92.8 bits (229), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 45/72 (62%), Positives = 55/72 (76%), Gaps = 1/72 (1%)

Query: 1  MSSSCP-AGKGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVN 59
          ++  CP AGK SWPELVG+NGE AA II+ ENPKV A  V E  +VT DFRCDRVRV+V+
Sbjct: 9  ITDVCPDAGKSSWPELVGINGEVAAKIIVRENPKVRAGIVKEGMMVTMDFRCDRVRVWVD 68

Query: 60 DHGIVTRVPRIG 71
           +GIV  +P+IG
Sbjct: 69 KYGIVKDIPQIG 80

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255551925|ref|XP_002517007.1| Glu S.griseus protease inhibitor, putative [Ricinus communis] gi|223543642|gb|EEF45170.1| Glu S.griseus protease inhibitor, putative [Ricinus communis]

 Score = 90.5 bits (223), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 44/65 (67%), Positives = 51/65 (78%)

Query: 7  AGKGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDHGIVTR 66
          AGK SWPELVG NGEAA  IIM ENP+V A TV E + V+ DFR DRVRVF++D+ IVT 
Sbjct: 6  AGKSSWPELVGNNGEAATAIIMRENPRVKANTVKEGSPVSGDFRSDRVRVFIDDNHIVTL 65

Query: 67 VPRIG 71
          VP+IG
Sbjct: 66 VPKIG 70

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224114800|ref|XP_002316860.1| predicted protein [Populus trichocarpa] gi|224117040|ref|XP_002317459.1| predicted protein [Populus trichocarpa] gi|222859925|gb|EEE97472.1| predicted protein [Populus trichocarpa] gi|222860524|gb|EEE98071.1| predicted protein [Populus trichocarpa]

 Score = 90.5 bits (223), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 43/65 (66%), Positives = 51/65 (78%)

Query: 7  AGKGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDHGIVTR 66
          AGK SWPELVG+NGE AA II+ ENPKV A  V E  +VT DFRCDRVRV+V+ +GIV  
Sbjct: 2  AGKSSWPELVGINGEVAAKIIVRENPKVRAGIVKEGMMVTMDFRCDRVRVWVDKYGIVKD 61

Query: 67 VPRIG 71
          +P+IG
Sbjct: 62 IPQIG 66

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147823287|emb|CAN75275.1| hypothetical protein VITISV_043736 [Vitis vinifera]

 Score = 90.5 bits (223), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 43/69 (62%), Positives = 53/69 (76%)

Query: 3  SSCPAGKGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDHG 62
          ++CP GK SWPELVG++GEAAA II  EN  V A  V E  +VT DFRCDRVRV+V+ +G
Sbjct: 2  ATCPDGKSSWPELVGVHGEAAAAIIERENLNVKAGVVKEGTLVTTDFRCDRVRVWVDSYG 61

Query: 63 IVTRVPRIG 71
          IV+ VP+IG
Sbjct: 62 IVSMVPKIG 70

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255559973|ref|XP_002521005.1| Inhibitor of trypsin and hageman factor, putative [Ricinus communis] gi|223539842|gb|EEF41422.1| Inhibitor of trypsin and hageman factor, putative [Ricinus communis]

 Score = 90.1 bits (222), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 43/64 (67%), Positives = 49/64 (76%)

Query: 8  GKGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDHGIVTRV 67
          GK SWPELVG+ GE A  II+ ENPKVGAT V E  +VT DFRCDRVRV+V+ +GIV  V
Sbjct: 9  GKRSWPELVGIKGEVAVEIIVQENPKVGATIVKEGMMVTMDFRCDRVRVWVDKYGIVKDV 68

Query: 68 PRIG 71
          P IG
Sbjct: 69 PHIG 72

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297737186|emb|CBI26387.3| unnamed protein product [Vitis vinifera]

 Score = 89.0 bits (219), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 42/69 (60%), Positives = 52/69 (75%)

Query: 3  SSCPAGKGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDHG 62
          ++CP GK SWPELVG++GEAAA II  EN  V A  V E  +VT DFRCDRVRV+V+ +G
Sbjct: 2  TTCPDGKSSWPELVGVHGEAAAAIIERENLNVKAGVVKEGTLVTTDFRCDRVRVWVDSYG 61

Query: 63 IVTRVPRIG 71
          IV+  P+IG
Sbjct: 62 IVSMAPKIG 70

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356576499|ref|XP_003556368.1| PREDICTED: glu S.griseus protease inhibitor [Glycine max] gi|255631802|gb|ACU16268.1| unknown [Glycine max]

 Score = 86.3 bits (212), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 44/71 (61%), Positives = 50/71 (70%), Gaps = 1/71 (1%)

Query: 1  MSSSCPAGKGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVND 60
          M+S C  GK SWPELVG+ G  A   I  ENP V A TV + +IVTADFRCDRVRV+V  
Sbjct: 1  MASEC-KGKSSWPELVGVEGTVAVATIERENPLVDANTVLKGSIVTADFRCDRVRVWVTK 59

Query: 61 HGIVTRVPRIG 71
          HGIV + PRIG
Sbjct: 60 HGIVYQAPRIG 70

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224086174|ref|XP_002335221.1| predicted protein [Populus trichocarpa] gi|222833138|gb|EEE71615.1| predicted protein [Populus trichocarpa]

 Score = 82.4 bits (202), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 40/71 (56%), Positives = 51/71 (71%), Gaps = 1/71 (1%)

Query: 1  MSSSCP-AGKGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVN 59
          M+  C   GK SWPELVG+NGE AA II +ENPKV  + V+E  +VT + RCDRVRV+V+
Sbjct: 1  MTDVCSDTGKSSWPELVGINGEVAAKIIESENPKVRVSIVEEGMMVTQEIRCDRVRVWVD 60

Query: 60 DHGIVTRVPRI 70
           +GIV  +P I
Sbjct: 61 KNGIVKDIPSI 71

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	71
TAIR|locus:2064981	70	AT2G38870 [Arabidopsis thalian	0.985	1.0	0.549	9.8e-16
UNIPROTKB|Q6XNP7	70	PI1 "Protease inhibitor HPI" [	0.985	1.0	0.535	3e-14
TAIR|locus:2158397	103	AT5G43570 [Arabidopsis thalian	0.957	0.660	0.561	5.6e-13
UNIPROTKB|Q40059	84	Ica-2 "Chymotrypsin inhibitor	0.887	0.75	0.396	3.3e-08
TAIR|locus:2102822	85	AT3G46860 [Arabidopsis thalian	0.943	0.788	0.411	4.8e-07
TAIR|locus:2083058	96	AT3G50020 [Arabidopsis thalian	0.929	0.687	0.414	5.5e-06

TAIR|locus:2064981 AT2G38870 [Arabidopsis thaliana (taxid:3702)]

 Score = 197 (74.4 bits), Expect = 9.8e-16, P = 9.8e-16
 Identities = 39/71 (54%), Positives = 49/71 (69%)

Query:     1 MSSSCPAGKGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVND 60
             MS+ CP  K SWPEL G NG+ AA +I  ENP V A  + + + VTADFRCDRVRVFV+ 
Sbjct:     1 MSTECPR-KNSWPELTGTNGDYAAVVIERENPTVNAAVILDGSPVTADFRCDRVRVFVDG 59

Query:    61 HGIVTRVPRIG 71
             + IV + P+ G
Sbjct:    60 NRIVVKTPKSG 70

GO:0004867 "serine-type endopeptidase inhibitor activity" evidence=IEA;ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0009611 "response to wounding" evidence=IEA;ISS

GO:0005618 "cell wall" evidence=IDA

GO:0050832 "defense response to fungus" evidence=IMP

GO:0015824 "proline transport" evidence=RCA

UNIPROTKB|Q6XNP7 PI1 "Protease inhibitor HPI" [Hevea brasiliensis (taxid:3981)]

 Score = 183 (69.5 bits), Expect = 3.0e-14, P = 3.0e-14
 Identities = 38/71 (53%), Positives = 47/71 (66%)

Query:     1 MSSSCPAGKGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVND 60
             M+S CP  K SWPELVG NG+ AA II  EN  V A  V E   +T D   +RVRVFV++
Sbjct:     1 MASQCPV-KNSWPELVGTNGDIAAGIIQTENANVKAIVVKEGLPITQDLNFNRVRVFVDE 59

Query:    61 HGIVTRVPRIG 71
             + +VT+VP IG
Sbjct:    60 NRVVTQVPAIG 70

GO:0004867 "serine-type endopeptidase inhibitor activity" evidence=IDA

TAIR|locus:2158397 AT5G43570 [Arabidopsis thaliana (taxid:3702)]

 Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
 Identities = 41/73 (56%), Positives = 44/73 (60%)

Query:     1 MSSSCP--AGKG---SWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVR 55
             MS  C   AG+G   SWPELVG  GE    II  EN KV A  + ENA+V A   CDRV 
Sbjct:     1 MSDVCQNTAGEGMKSSWPELVGRRGEEVKEIIDRENTKVTAKIISENAVVLAVVICDRVY 60

Query:    56 VFVNDHGIVTRVP 68
             V VND GIVTR P
Sbjct:    61 VRVNDQGIVTRTP 73

GO:0004867 "serine-type endopeptidase inhibitor activity" evidence=IEA;ISS

GO:0005575 "cellular_component" evidence=ND

GO:0009611 "response to wounding" evidence=IEA;ISS

GO:0006952 "defense response" evidence=ISS

UNIPROTKB|Q40059 Ica-2 "Chymotrypsin inhibitor 2" [Hordeum vulgare (taxid:4513)]

 Score = 126 (49.4 bits), Expect = 3.3e-08, P = 3.3e-08
 Identities = 25/63 (39%), Positives = 37/63 (58%)

Query:     9 KGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDHGIVTRVP 68
             K  WPELVG + E A  +I+ + P      +    IVT ++R DRVR+FV+    + +VP
Sbjct:    22 KTEWPELVGKSVEEAKKVILQDKPAAQIIVLPVGTIVTMEYRIDRVRLFVDRLDNIAQVP 81

Query:    69 RIG 71
             R+G
Sbjct:    82 RVG 84

GO:0005515 "protein binding" evidence=IPI

TAIR|locus:2102822 AT3G46860 [Arabidopsis thaliana (taxid:3702)]

 Score = 115 (45.5 bits), Expect = 4.8e-07, P = 4.8e-07
 Identities = 28/68 (41%), Positives = 35/68 (51%)

Query:     5 CPAGKG-SWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDHGI 63
             C  GK   WPELVG NG+ A   I  ENP V A  +        +F C+RV V++  +G 
Sbjct:    18 CAIGKKYRWPELVGKNGQLAKMTIERENPNVLAIVLRYGEKRIENFCCNRVFVYLGSNGQ 77

Query:    64 VTRVPRIG 71
             V   P IG
Sbjct:    78 VADAPMIG 85

GO:0004867 "serine-type endopeptidase inhibitor activity" evidence=IEA;ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0009611 "response to wounding" evidence=IEA;ISS

GO:0006952 "defense response" evidence=ISS

TAIR|locus:2083058 AT3G50020 [Arabidopsis thaliana (taxid:3702)]

 Score = 105 (42.0 bits), Expect = 5.5e-06, P = 5.5e-06
 Identities = 29/70 (41%), Positives = 38/70 (54%)

Query:     6 PAGKGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRV--RVFVND--H 61
             P  K  WPEL G+ G  A  II  +NPKV    + ++  V A   C+RV  RV VN+  +
Sbjct:    27 PGIKVDWPELNGVKGLEAKRIIEHDNPKVVVVIIPDDVAVLAVNCCNRVIVRVPVNNCPN 86

Query:    62 GIVTRVPRIG 71
             G V+  P IG
Sbjct:    87 GPVSNFPHIG 96


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.134   0.412    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       71        71   0.00091  102 3  11 22  0.48    28
                                                     29  0.42    29


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  6
  No. of states in DFA:  515 (55 KB)
  Total size of DFA:  94 KB (2068 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  7.80u 0.13s 7.93t   Elapsed:  00:00:00
  Total cpu time:  7.80u 0.13s 7.93t   Elapsed:  00:00:00
  Start:  Sat May 11 00:45:51 2013   End:  Sat May 11 00:45:51 2013

GO:0004867 "serine-type endopeptidase inhibitor activity" evidence=IEA;ISS

GO:0009611 "response to wounding" evidence=IEA;ISS

GO:0006952 "defense response" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q6XNP7	HPI_HEVBR	No assigned EC number	0.5352	0.9859	1.0	N/A	no
P19873	ITH5_CUCMA	No assigned EC number	0.5507	0.9577	1.0	N/A	no
P82381	ICI_LINUS	No assigned EC number	0.5507	0.9577	0.9855	N/A	no
P80211	ATSI_AMACA	No assigned EC number	0.5072	0.9577	0.9855	N/A	no
P24076	BGIA_MOMCH	No assigned EC number	0.5797	0.9577	1.0	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	71
pfam00280	63	pfam00280, potato_inhibit, Potato inhibitor I fami	4e-28

>gnl|CDD|201130 pfam00280, potato_inhibit, Potato inhibitor I family

 Score = 94.9 bits (237), Expect = 4e-28
 Identities = 40/63 (63%), Positives = 44/63 (69%)

Query: 9  KGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDHGIVTRVP 68
          K SWPELVG  GE A  II  ENP V    + E + VTADFRC+RVRVFVND+GIV R P
Sbjct: 1  KTSWPELVGKTGEEAKAIIEKENPDVDVVVLPEGSPVTADFRCNRVRVFVNDNGIVVRTP 60

Query: 69 RIG 71
           IG
Sbjct: 61 VIG 63

Length = 63

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	71
PF00280	63	potato_inhibit: Potato inhibitor I family; InterPr	99.98
PF11720	60	Inhibitor_I78: Peptidase inhibitor I78 family; Int	99.79

>PF00280 potato_inhibit: Potato inhibitor I family; InterPro: IPR000864 Peptide proteinase inhibitors can be found as single domain proteins or as single or multiple domains within proteins; these are referred to as either simple or compound inhibitors, respectively

Probab=99.98  E-value=4.1e-33  Score=160.97  Aligned_cols=63  Identities=63%  Similarity=1.030  Sum_probs=59.3

Q ss_pred             CCcchhccCCCHHHHHHHHHHhCCCccEEEecCCceecCcccCCeeEEEECCCCcEEecccCC
Q 040548            9 KGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDHGIVTRVPRIG   71 (71)
Q Consensus         9 k~~wpelVG~~~~~A~~~i~~~~p~~~vrvl~pg~~vTmDy~~~RV~v~vD~~g~V~~vP~iG   71 (71)
                      |++||||||+++++|+++|++|||++++.+|++|+++|+||||+||+||+|++|+|+++|+||
T Consensus         1 K~sWPELVG~~~~~A~~~I~~e~P~v~v~vlp~gs~vt~df~~~RVrv~vd~~~~V~~~P~iG   63 (63)
T PF00280_consen    1 KTSWPELVGKSGEEAKAIIERENPDVTVVVLPEGSPVTMDFRCDRVRVFVDSNGIVVRVPRIG   63 (63)
T ss_dssp             -SB-GGGTTSBHHHHHHHHHHHSTTSEEEEEETTSEEESSBETTEEEEEEETTSBBES-SEEE
T ss_pred             CCCCchhcCCCHHHHHHHHHHHCCCCeEEEEeCCCCcCCCcCCCEEEEEECCCCeEEeCCCcC
Confidence            799999999999999999999999999999999999999999999999999999999999998

In many cases they are synthesised as part of a larger precursor protein, either as a prepropeptide or as an N-terminal domain associated with an inactive peptidase or zymogen. This domain prevents access of the substrate to the active site. Removal of the N-terminal inhibitor domain either by interaction with a second peptidase or by autocatalytic cleavage activates the zymogen. Other inhibitors interact direct with proteinases using a simple noncovalent lock and key mechanism; while yet others use a conformational change-based trapping mechanism that depends on their structural and thermodynamic properties. This family of proteinase inhibitors belong to MEROPS inhibitor family I13, clan IG. They inhibit peptidases of the S1 (IPR001254 from INTERPRO) and S8 (IPR000209 from INTERPRO) families []. Potato inhibitor type I sequences are not solely restricted to potatoes but are found in other plant species for example: barley endosperm chymotrypsin inhibitor [], and pumpkin trypsin inhibitor. Exceptions are found in leech's, e.g.Hirudo medicinalis (Medicinal leech), but not other metazoa []. In general, the proteins have retained a specificity towards chymotrypsin-like and elastase-like proteases []. Structurally these inhibitors are small (60 to 90 residues) and in contrast with other families of protease inhibitors, they lack disulphide bonds. The inhibitor is a wedge-shaped molecule, its pointed edge formed by the protease-binding loop, which contains the scissile bond. The loop binds tightly to the protease active site, subsequent cleavage of the scissile bond causing inhibition of the enzyme []. The inhibitors (designated type I and II) are synthesised in potato tubers, increasing in concentration as the tuber develops. Synthesis of the inhibitors throughout the plant is also induced by leaf damage; this systemic response being triggered by the release of a putative plant hormone []. Examples found in the bacteria and archaea are probable false positives.; GO: 0004867 serine-type endopeptidase inhibitor activity, 0009611 response to wounding; PDB: 1TEC_I 1SBN_I 1ACB_I 1EGP_A 3TEC_I 2SEC_I 1EGL_A 2TEC_I 1SIB_I 1MEE_I ....

>PF11720 Inhibitor_I78: Peptidase inhibitor I78 family; InterPro: IPR021719 This family includes Aspergillus elastase inhibitor and belongs to MEROPS peptidase inhibitor family I78

Probab=99.79  E-value=5.3e-20  Score=104.87  Aligned_cols=56  Identities=34%  Similarity=0.475  Sum_probs=47.5

Q ss_pred             CCCcchhccCCCHHHHHHHHHHhCCCccEEEecCCceecCcccCCeeEEEECCCCcEEec
Q 040548            8 GKGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDHGIVTRV   67 (71)
Q Consensus         8 ~k~~wpelVG~~~~~A~~~i~~~~p~~~vrvl~pg~~vTmDy~~~RV~v~vD~~g~V~~v   67 (71)
                      +++..+.|||++++++...-.    ...+||++||+++|||||++||||++|++|+|+++
T Consensus         2 ~A~~~q~lvGq~~~~~~~~~~----~~~~Rvi~Pg~~vTmDyr~dRLnv~~D~~g~I~~v   57 (60)
T PF11720_consen    2 GAAAAQSLVGQPASAAEREEL----AETVRVIRPGDAVTMDYRPDRLNVEVDDDGVITRV   57 (60)
T ss_pred             CHHHHHHhhCCCccccccccc----ccceEEeCCCCcCcccCCCCcEEEEECCCCcEEEE
Confidence            578889999999887543211    33699999999999999999999999999999985

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	71
1tin_A	69	Three-Dimensional Structure In Solution Of Cucurbit		2e-15
1mit_A	69	Recombinant Cucurbita Maxima Trypsin Inhibitor V (R		2e-15
1dwm_A	70	Solution Structure Of Linum Usitatissinum Trypsin I		1e-14
1vbw_A	68	Crystal Structure Of Bitter Gourd Trypsin Inhibitor		4e-14
3rdy_A	79	Crystal Structure Of Buckwheat Trypsin Inhibitor Rb		6e-11
1tm5_I	64	Crystal Structure Of The Complex Of Subtilisin Bpn'		2e-09
1coa_I	64	The Effect Of Cavity Creating Mutations In The Hydr		3e-09
3ci2_A	66	Refinement Of The Three-Dimensional Solution Struct		3e-09
1ypc_I	64	Direct Observation Of Better Hydration At The N-Ter		4e-09
1lw6_I	64	Crystal Structure Of The Complex Of Subtilisin Bpn'		4e-09
1tm3_I	64	Crystal Structure Of The Complex Of Subtilisin Bpn'		6e-09
2ci2_I	83	Crystal And Molecular Structure Of The Serine Prote		6e-09
1tm1_I	64	Crystal Structure Of The Complex Of Subtilisin Bpn'		6e-09
1tm7_I	64	Crystal Structure Of The Complex Of Subtilisin Bpn'		6e-09
1tm4_I	64	Crystal Structure Of The Complex Of Subtilsin Bpn'w		7e-09
1ypa_I	64	Direct Observation Of Better Hydration At The N-Ter		8e-09
1ypb_I	64	Direct Observation Of Better Hydration At The N-Ter		8e-09
1tmg_I	64	Crystal Structure Of The Complex Of Subtilisin Bpn'		9e-09
1y3b_I	64	Crystal Structure Of The Complex Of Subtilisin Bpn'		1e-08
1y4a_I	64	Crystal Structure Of The Complex Of Subtilisin Bpn'		1e-08
1y34_I	64	Crystal Structure Of The Complex Of Subtilisin Bpn'		2e-08
1y1k_I	64	Crystal Structure Of The Complex Of Subtilisin Bpn'		3e-08
1y33_I	64	Crystal Structure Of The Complex Of Subtilisin Bpn'		3e-08
1to1_I	64	Crystal Structure Of The Complex Of Subtilisin Bpn'		4e-08
1y3d_I	64	Crystal Structure Of The Complex Of Subtilisin Bpn'		5e-08
1y48_I	64	Crystal Structure Of The Complex Of Subtilisin Bpn'		5e-08
1y3c_I	64	Crystal Structure Of The Complex Of Subtilisin Bpn'		5e-08
1y3f_I	64	Crystal Structure Of The Complex Of Subtilisin Bpn'		9e-08
1cis_A	66	Context Dependence Of Protein Secondary Structure F		1e-07
1hym_A	45	Hydrolyzed Trypsin Inhibitor (Cmti-V, Minimized Ave		4e-05
1cse_I	70	The High-Resolution X-Ray Crystal Structure Of The		1e-04
1mee_I	64	The Complex Between The Subtilisin From A Mesophili		1e-04
4b2a_B	66	Structure Of The Factor Xa-Like Trypsin Variant Tri		1e-04
4b1t_B	70	Structure Of The Factor Xa-Like Trypsin Variant Tri		1e-04
1sbn_I	70	Refined Crystal Structures Of Subtilisin Novo In Co		1e-04
4b2b_B	71	Structure Of The Factor Xa-Like Trypsin Variant Tri		1e-04
4h4f_B	70	Crystal Structure Of Human Chymotrypsin C (ctrc) Bo		1e-04
1tec_I	70	Crystallographic Refinement By Incorporation Of Mol		2e-04
1sib_I	70	Refined Crystal Structures Of Subtilisin Novo In Co		3e-04

>pdb|1TIN|A Chain A, Three-Dimensional Structure In Solution Of Cucurbita Maxima Trypsin Inhibitor-V Determined By Nmr Spectroscopy Length = 69

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 38/69 (55%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
Query: 3  SSCPAGKGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDHG 62
          SSCP GK SWP LVG+ G  A  II  +NP V A  ++E   VT DFRC+RVR++VN  G
Sbjct: 2  SSCP-GKSSWPHLVGVGGSVAKAIIERQNPNVKAVILEEGTPVTKDFRCNRVRIWVNKRG 60
Query: 63 IVTRVPRIG 71
          +V   PRIG
Sbjct: 61 LVVSPPRIG 69

>pdb|1MIT|A Chain A, Recombinant Cucurbita Maxima Trypsin Inhibitor V (Rcmti-V) (Nmr, Minimized Average Structure) Length = 69

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 38/69 (55%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
Query: 3  SSCPAGKGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDHG 62
          SSCP GK SWP LVG+ G  A  II  +NP V A  ++E   VT DFRC+RVR++VN  G
Sbjct: 2  SSCP-GKSSWPHLVGVGGSVAKAIIERQNPNVKAVILEEGTPVTKDFRCNRVRIWVNKRG 60
Query: 63 IVTRVPRIG 71
          +V   PRIG
Sbjct: 61 LVVSPPRIG 69

>pdb|1DWM|A Chain A, Solution Structure Of Linum Usitatissinum Trypsin Inhibitor (Luti) Length = 70

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 38/69 (55%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
Query: 2  SSSCPAGKGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDH 61
          S  CP GK +WPELVG +G  AA  +  EN  V A  + E + +T DFRCDRV V VNDH
Sbjct: 2  SRRCP-GKNAWPELVGKSGNMAAATVERENRNVHAIVLKEGSAMTKDFRCDRVWVIVNDH 60
Query: 62 GIVTRVPRI 70
          G+VT VP I
Sbjct: 61 GVVTSVPHI 69

>pdb|1VBW|A Chain A, Crystal Structure Of Bitter Gourd Trypsin Inhibitor Length = 68

Iteration: 1
 Score = 72.8 bits (177), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 35/64 (54%), Positives = 42/64 (65%)
Query: 8  GKGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDHGIVTRV 67
          GK SWP+LVG  G AA  +I  ENP+V A  +   +  T DFRCDRVRV+V + GIV R 
Sbjct: 5  GKSSWPQLVGSTGAAAKAVIERENPRVRAVIIKVGSGATKDFRCDRVRVWVTERGIVARP 64
Query: 68 PRIG 71
          P IG
Sbjct: 65 PTIG 68

>pdb|3RDY|A Chain A, Crystal Structure Of Buckwheat Trypsin Inhibitor Rbti At 1.84 Angstrom Resolution Length = 79

Iteration: 1
 Score = 62.4 bits (150), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 31/62 (50%), Positives = 37/62 (59%)
Query: 7  AGKGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDHGIVTR 66
          +GK  WPELVG  G  AA II  EN  V A  + E + V  D RCDRV VFV++ G+V  
Sbjct: 15 SGKQEWPELVGERGSKAAKIIENENEDVRAIVLPEGSAVPRDLRCDRVWVFVDERGVVVD 74
Query: 67 VP 68
           P
Sbjct: 75 TP 76

>pdb|1TM5|I Chain I, Crystal Structure Of The Complex Of Subtilisin Bpn' With Chymotrypsin Inhibitor 2 M59a Mutant Length = 64

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 26/63 (41%), Positives = 38/63 (60%)
Query: 9  KGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDHGIVTRVP 68
          K  WPELVG + E A  +I+ + P      +    IVTA++R DRVR+FV+    + +VP
Sbjct: 2  KTEWPELVGKSVEEAKKVILQDKPAAQIIVLPVGTIVTAEYRIDRVRLFVDRLDNIAQVP 61
Query: 69 RIG 71
          R+G
Sbjct: 62 RVG 64

>pdb|1COA|I Chain I, The Effect Of Cavity Creating Mutations In The Hydrophobic Core Of Chymotrypsin Inhibitor 2 Length = 64

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 26/63 (41%), Positives = 37/63 (58%)
Query: 9  KGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDHGIVTRVP 68
          K  WPELVG + E A  +I+ + P+     +    IVT ++R DRVR+FV+    V  VP
Sbjct: 2  KTEWPELVGKSVEEAKKVILQDKPEAQIIVLPVGTIVTMEYRIDRVRLFVDKLDNVAEVP 61
Query: 69 RIG 71
          R+G
Sbjct: 62 RVG 64

>pdb|3CI2|A Chain A, Refinement Of The Three-Dimensional Solution Structure Of Barley Serine Proteinase Inhibitor 2 And Comparison With The Structures In Crystals Length = 66

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 38/63 (60%)
Query: 9  KGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDHGIVTRVP 68
          K  WPELVG + E A  +I+ + P+     +    IVT ++R DRVR+FV+    + +VP
Sbjct: 4  KTEWPELVGKSVEEAKKVILQDKPEAQIIVLPVGTIVTMEYRIDRVRLFVDKLDNIAQVP 63
Query: 69 RIG 71
          R+G
Sbjct: 64 RVG 66

>pdb|1YPC|I Chain I, Direct Observation Of Better Hydration At The N-Terminus Of An Alpha-Helix With Glycine Rather Than Alanine As N-Cap Length = 64

Iteration: 1
 Score = 56.2 bits (134), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 38/63 (60%)
Query: 9  KGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDHGIVTRVP 68
          K  WPELVG +  AA  +I+ + P+     +    IVT ++R DRVR+FV+    + +VP
Sbjct: 2  KTEWPELVGKSVAAAKKVILQDKPEAQIIVLPVGTIVTMEYRIDRVRLFVDKLDNIAQVP 61
Query: 69 RIG 71
          R+G
Sbjct: 62 RVG 64

>pdb|1LW6|I Chain I, Crystal Structure Of The Complex Of Subtilisin Bpn' With Chymotrypsin Inhibitor 2 At 1.5 Angstrom Resolution Length = 64

Iteration: 1
 Score = 56.2 bits (134), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 37/63 (58%)
Query: 9  KGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDHGIVTRVP 68
          K  WPELVG + E A  +I+ + P      +    IVT ++R DRVR+FV+    + +VP
Sbjct: 2  KTEWPELVGKSVEEAKKVILQDKPAAQIIVLPVGTIVTMEYRIDRVRLFVDKLDNIAQVP 61
Query: 69 RIG 71
          R+G
Sbjct: 62 RVG 64

>pdb|1TM3|I Chain I, Crystal Structure Of The Complex Of Subtilisin Bpn' With Chymotrypsin Inhibitor 2 M59k Mutant Length = 64

Iteration: 1
 Score = 55.8 bits (133), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 37/63 (58%)
Query: 9  KGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDHGIVTRVP 68
          K  WPELVG + E A  +I+ + P      +    IVT ++R DRVR+FV+    + +VP
Sbjct: 2  KTEWPELVGKSVEEAKKVILQDKPAAQIIVLPVGTIVTKEYRIDRVRLFVDRLDNIAQVP 61
Query: 69 RIG 71
          R+G
Sbjct: 62 RVG 64

>pdb|2CI2|I Chain I, Crystal And Molecular Structure Of The Serine Proteinase Inhibitor Ci-2 From Barley Seeds Length = 83

Iteration: 1
 Score = 55.8 bits (133), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 37/63 (58%)
Query: 9  KGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDHGIVTRVP 68
          K  WPELVG + E A  +I+ + P+     +    IVT ++R DRVR+FV+    +  VP
Sbjct: 21 KTEWPELVGKSVEEAKKVILQDKPEAQIIVLPVGTIVTMEYRIDRVRLFVDKLDNIAEVP 80
Query: 69 RIG 71
          R+G
Sbjct: 81 RVG 83

>pdb|1TM1|I Chain I, Crystal Structure Of The Complex Of Subtilisin Bpn' With Chymotrypsin Inhibitor 2 Length = 64

Iteration: 1
 Score = 55.8 bits (133), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 37/63 (58%)
Query: 9  KGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDHGIVTRVP 68
          K  WPELVG + E A  +I+ + P      +    IVT ++R DRVR+FV+    + +VP
Sbjct: 2  KTEWPELVGKSVEEAKKVILQDKPAAQIIVLPVGTIVTMEYRIDRVRLFVDRLDNIAQVP 61
Query: 69 RIG 71
          R+G
Sbjct: 62 RVG 64

>pdb|1TM7|I Chain I, Crystal Structure Of The Complex Of Subtilisin Bpn' With Chymotrypsin Inhibitor 2 M59y Mutant Length = 64

Iteration: 1
 Score = 55.8 bits (133), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 37/63 (58%)
Query: 9  KGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDHGIVTRVP 68
          K  WPELVG + E A  +I+ + P      +    IVT ++R DRVR+FV+    + +VP
Sbjct: 2  KTEWPELVGKSVEEAKKVILQDKPAAQIIVLPVGTIVTYEYRIDRVRLFVDRLDNIAQVP 61
Query: 69 RIG 71
          R+G
Sbjct: 62 RVG 64

>pdb|1TM4|I Chain I, Crystal Structure Of The Complex Of Subtilsin Bpn'with Chymotrypsin Inhibitor 2 M59g Mutant Length = 64

Iteration: 1
 Score = 55.5 bits (132), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 37/63 (58%)
Query: 9  KGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDHGIVTRVP 68
          K  WPELVG + E A  +I+ + P      +    IVT ++R DRVR+FV+    + +VP
Sbjct: 2  KTEWPELVGKSVEEAKKVILQDKPAAQIIVLPVGTIVTGEYRIDRVRLFVDRLDNIAQVP 61
Query: 69 RIG 71
          R+G
Sbjct: 62 RVG 64

>pdb|1YPA|I Chain I, Direct Observation Of Better Hydration At The N-Terminus Of An Alpha-Helix With Glycine Rather Than Alanine As N-Cap Length = 64

Iteration: 1
 Score = 55.5 bits (132), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 37/63 (58%)
Query: 9  KGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDHGIVTRVP 68
          K  WPELVG    AA  +I+ + P+     +    IVT ++R DRVR+FV+    + +VP
Sbjct: 2  KTEWPELVGKAVAAAKKVILQDKPEAQIIVLPVGTIVTMEYRIDRVRLFVDKLDNIAQVP 61
Query: 69 RIG 71
          R+G
Sbjct: 62 RVG 64

>pdb|1YPB|I Chain I, Direct Observation Of Better Hydration At The N-Terminus Of An Alpha-Helix With Glycine Rather Than Alanine As N-Cap Length = 64

Iteration: 1
 Score = 55.5 bits (132), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 37/63 (58%)
Query: 9  KGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDHGIVTRVP 68
          K  WPELVG    AA  +I+ + P+     +    IVT ++R DRVR+FV+    + +VP
Sbjct: 2  KTEWPELVGKGVAAAKKVILQDKPEAQIIVLPVGTIVTMEYRIDRVRLFVDKLDNIAQVP 61
Query: 69 RIG 71
          R+G
Sbjct: 62 RVG 64

>pdb|1TMG|I Chain I, Crystal Structure Of The Complex Of Subtilisin Bpn' With Chymotrypsin Inhibitor 2 M59f Mutant Length = 64

Iteration: 1
 Score = 55.5 bits (132), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 37/63 (58%)
Query: 9  KGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDHGIVTRVP 68
          K  WPELVG + E A  +I+ + P      +    IVT ++R DRVR+FV+    + +VP
Sbjct: 2  KTEWPELVGKSVEEAKKVILQDKPAAQIIVLPVGTIVTFEYRIDRVRLFVDRLDNIAQVP 61
Query: 69 RIG 71
          R+G
Sbjct: 62 RVG 64

>pdb|1Y3B|I Chain I, Crystal Structure Of The Complex Of Subtilisin Bpn' With Chymotrypsin Inhibitor 2 E60s Mutant Length = 64

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 36/63 (57%)
Query: 9  KGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDHGIVTRVP 68
          K  WPELVG + E A  +I+ + P      +    IVT  +R DRVR+FV+    + +VP
Sbjct: 2  KTEWPELVGKSVEEAKKVILQDKPAAQIIVLPVGTIVTMSYRIDRVRLFVDRLDNIAQVP 61
Query: 69 RIG 71
          R+G
Sbjct: 62 RVG 64

>pdb|1Y4A|I Chain I, Crystal Structure Of The Complex Of Subtilisin Bpn' With Chymotrypsin Inhibitor 2 M59r/e60s Mutant Length = 64

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 36/63 (57%)
Query: 9  KGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDHGIVTRVP 68
          K  WPELVG + E A  +I+ + P      +    IVT  +R DRVR+FV+    + +VP
Sbjct: 2  KTEWPELVGKSVEEAKKVILQDKPAAQIIVLPVGTIVTRSYRIDRVRLFVDRLDNIAQVP 61
Query: 69 RIG 71
          R+G
Sbjct: 62 RVG 64

>pdb|1Y34|I Chain I, Crystal Structure Of The Complex Of Subtilisin Bpn' With Chymotrypsin Inhibitor 2 E60a Mutant Length = 64

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 36/63 (57%)
Query: 9  KGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDHGIVTRVP 68
          K  WPELVG + E A  +I+ + P      +    IVT  +R DRVR+FV+    + +VP
Sbjct: 2  KTEWPELVGKSVEEAKKVILQDKPAAQIIVLPVGTIVTMAYRIDRVRLFVDRLDNIAQVP 61
Query: 69 RIG 71
          R+G
Sbjct: 62 RVG 64

>pdb|1Y1K|I Chain I, Crystal Structure Of The Complex Of Subtilisin Bpn' With Chymotrypsin Inhibitor 2 T58a Mutant Length = 64

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 9  KGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDHGIVTRVP 68
          K  WPELVG + E A  +I+ + P      +    IV  ++R DRVR+FV+    + +VP
Sbjct: 2  KTEWPELVGKSVEEAKKVILQDKPAAQIIVLPVGTIVAMEYRIDRVRLFVDRLDNIAQVP 61
Query: 69 RIG 71
          R+G
Sbjct: 62 RVG 64

>pdb|1Y33|I Chain I, Crystal Structure Of The Complex Of Subtilisin Bpn' With Chymotrypsin Inhibitor 2 T58p Mutant Length = 64

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 9  KGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDHGIVTRVP 68
          K  WPELVG + E A  +I+ + P      +    IV  ++R DRVR+FV+    + +VP
Sbjct: 2  KTEWPELVGKSVEEAKKVILQDKPAAQIIVLPVGTIVPMEYRIDRVRLFVDRLDNIAQVP 61
Query: 69 RIG 71
          R+G
Sbjct: 62 RVG 64

>pdb|1TO1|I Chain I, Crystal Structure Of The Complex Of Subtilisin Bpn' With Chymotrypsin Inhibitor 2 Y61a Mutant Length = 64

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 36/63 (57%)
Query: 9  KGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDHGIVTRVP 68
          K  WPELVG + E A  +I+ + P      +    IVT + R DRVR+FV+    + +VP
Sbjct: 2  KTEWPELVGKSVEEAKKVILQDKPAAQIIVLPVGTIVTMEARIDRVRLFVDRLDNIAQVP 61
Query: 69 RIG 71
          R+G
Sbjct: 62 RVG 64

>pdb|1Y3D|I Chain I, Crystal Structure Of The Complex Of Subtilisin Bpn' With Chymotrypsin Inhibitor 2 R67a Mutant Length = 64

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 9  KGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDHGIVTRVP 68
          K  WPELVG + E A  +I+ + P      +    IVT ++R DRV +FV+    + +VP
Sbjct: 2  KTEWPELVGKSVEEAKKVILQDKPAAQIIVLPVGTIVTMEYRIDRVALFVDRLDNIAQVP 61
Query: 69 RIG 71
          R+G
Sbjct: 62 RVG 64

>pdb|1Y48|I Chain I, Crystal Structure Of The Complex Of Subtilisin Bpn' With Chymotrypsin Inhibitor 2 R65a Mutant Length = 64

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 9  KGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDHGIVTRVP 68
          K  WPELVG + E A  +I+ + P      +    IVT ++R D VR+FV+    + +VP
Sbjct: 2  KTEWPELVGKSVEEAKKVILQDKPAAQIIVLPVGTIVTMEYRIDAVRLFVDRLDNIAQVP 61
Query: 69 RIG 71
          R+G
Sbjct: 62 RVG 64

>pdb|1Y3C|I Chain I, Crystal Structure Of The Complex Of Subtilisin Bpn' With Chymotrypsin Inhibitor 2 R62a Mutant Length = 64

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 9  KGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDHGIVTRVP 68
          K  WPELVG + E A  +I+ + P      +    IVT ++  DRVR+FV+    + +VP
Sbjct: 2  KTEWPELVGKSVEEAKKVILQDKPAAQIIVLPVGTIVTMEYAIDRVRLFVDRLDNIAQVP 61
Query: 69 RIG 71
          R+G
Sbjct: 62 RVG 64

>pdb|1Y3F|I Chain I, Crystal Structure Of The Complex Of Subtilisin Bpn' With Chymotrypsin Inhibitor 2 F69a Mutant Length = 64

Iteration: 1
 Score = 52.0 bits (123), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 9  KGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDHGIVTRVP 68
          K  WPELVG + E A  +I+ + P      +    IVT ++R DRVR+ V+    + +VP
Sbjct: 2  KTEWPELVGKSVEEAKKVILQDKPAAQIIVLPVGTIVTMEYRIDRVRLAVDRLDNIAQVP 61
Query: 69 RIG 71
          R+G
Sbjct: 62 RVG 64

>pdb|1CIS|A Chain A, Context Dependence Of Protein Secondary Structure Formation. The Three-Dimensional Structure And Stability Of A Hybrid Between Chymotrypsin Inhibitor 2 And Helix E From Subtilisin Carlsberg Length = 66

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 9  KGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAI--VTADFRCDRVRVFVNDHGIVTR 66
          K  WPELVG + E A  +I+ + P+     +++ A+    A++R DRVR+ V+    + +
Sbjct: 2  KTEWPELVGKSVEEAKKVILQDKPEAQIIVLEKQAVDNAYAEYRIDRVRLAVDKLDNIAQ 61
Query: 67 VPRIG 71
          VPR+G
Sbjct: 62 VPRVG 66

>pdb|1HYM|A Chain A, Hydrolyzed Trypsin Inhibitor (Cmti-V, Minimized Average Nmr Structure) Length = 45

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 23/44 (52%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 3  SSCPAGKGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVT 46
          SSCP GK SWP LVG+ G  A  II  +NP V A  ++E   VT
Sbjct: 2  SSCP-GKSSWPHLVGVGGSVAKAIIERQNPNVKAVILEEGTPVT 44

>pdb|1CSE|I Chain I, The High-Resolution X-Ray Crystal Structure Of The Complex Formed Between Subtilisin Carlsberg And Eglin C, An Elastase Inhibitor From The Leech Hirudo Medicinalis. Structural Analysis, Subtilisin Structure And Interface Geometry Length = 70

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 11 SWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVND-HGIVTRVPR 69
          S+PE+VG   + A        P+     + E + VT D R +RVRVF N    +V  VP 
Sbjct: 9  SFPEVVGKTVDQAREYFTLHYPQYNVYFLPEGSPVTLDLRYNRVRVFYNPGTNVVNHVPH 68
Query: 70 IG 71
          +G
Sbjct: 69 VG 70

>pdb|1MEE|I Chain I, The Complex Between The Subtilisin From A Mesophilic Bacterium And The Leech Inhibitor Eglin-C Length = 64

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 11 SWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVND-HGIVTRVPR 69
          S+PE+VG   + A        P+     + E + VT D R +RVRVF N    +V  VP 
Sbjct: 3  SFPEVVGKTVDQAREYFTLHYPQYNVYFLPEGSPVTLDLRYNRVRVFYNPGTNVVNHVPH 62
Query: 70 IG 71
          +G
Sbjct: 63 VG 64

>pdb|4B2A|B Chain B, Structure Of The Factor Xa-Like Trypsin Variant Triple-Ala (Tga) In Complex With Eglin C Length = 66

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 11 SWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVND-HGIVTRVPR 69
          S+PE+VG   + A        P+     + E + VT D R +RVRVF N    +V  VP 
Sbjct: 5  SFPEVVGKTVDQAREYFTLHYPQYDVYFLPEGSPVTKDLRYNRVRVFYNPGTNVVNHVPH 64
Query: 70 IG 71
          +G
Sbjct: 65 VG 66

>pdb|4B1T|B Chain B, Structure Of The Factor Xa-Like Trypsin Variant Triple-Ala ( Ta) In Complex With Eglin C Length = 70

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 11 SWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVND-HGIVTRVPR 69
          S+PE+VG   + A        P+     + E + VT D R +RVRVF N    +V  VP 
Sbjct: 9  SFPEVVGKTVDQAREYFTLHYPQYDVYFLPEGSPVTKDLRYNRVRVFYNPGTNVVNHVPH 68
Query: 70 IG 71
          +G
Sbjct: 69 VG 70

>pdb|1SBN|I Chain I, Refined Crystal Structures Of Subtilisin Novo In Complex With Wild-Type And Two Mutant Eglins. Comparison With Other Serine Proteinase Inhibitor Complexes Length = 70

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 11 SWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVND-HGIVTRVPR 69
          S+PE+VG   + A        P+     + E + VT D R +RVRVF N    +V  VP 
Sbjct: 9  SFPEVVGKTVDQAREYFTLHYPQYNVYFLPEGSPVTRDLRYNRVRVFYNPGTNVVNHVPH 68
Query: 70 IG 71
          +G
Sbjct: 69 VG 70

>pdb|4B2B|B Chain B, Structure Of The Factor Xa-Like Trypsin Variant Triple-Ala (Tgpa) In Complex With Eglin C Length = 71

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 11 SWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVND-HGIVTRVPR 69
          S+PE+VG   + A        P+     + E + VT D R +RVRVF N    +V  VP 
Sbjct: 10 SFPEVVGKTVDQAREYFTLHYPQYDVYFLPEGSPVTKDLRYNRVRVFYNPGTNVVNHVPH 69
Query: 70 IG 71
          +G
Sbjct: 70 VG 71

>pdb|4H4F|B Chain B, Crystal Structure Of Human Chymotrypsin C (ctrc) Bound To Inhibitor Eglin C From Hirudo Medicinalis Length = 70

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 11 SWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVND-HGIVTRVPR 69
          S+PE+VG   + A        P+     + E + VT D R +RVRVF N    +V  VP 
Sbjct: 9  SFPEVVGKTVDQAREYFTLHYPQYDVYFLPEGSPVTLDLRYNRVRVFYNPGTNVVNHVPH 68
Query: 70 IG 71
          +G
Sbjct: 69 VG 70

>pdb|1TEC|I Chain I, Crystallographic Refinement By Incorporation Of Molecular Dynamics. The Thermostable Serine Protease Thermitase Complexed With Eglin-C Length = 70

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 11 SWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVND-HGIVTRVPR 69
          S+PE+VG   + A        P+     + E + VT D R +RVRVF N    +V  VP 
Sbjct: 9  SFPEVVGKTVDQAREYFTLHYPQYDVYFLPEGSPVTLDLRYNRVRVFYNPGTNVVNHVPH 68
Query: 70 IG 71
          +G
Sbjct: 69 VG 70

>pdb|1SIB|I Chain I, Refined Crystal Structures Of Subtilisin Novo In Complex With Wild-Type And Two Mutant Eglins. Comparison With Other Serine Proteinase Inhibitor Complexes Length = 70

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 11 SWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVND-HGIVTRVPR 69
          S+PE+VG   + A        P+     + E + VT D R +RV+VF N    +V  VP 
Sbjct: 9  SFPEVVGKTVDQAREYFTLHYPQYDVYFLPEGSPVTLDLRYNRVKVFYNPGTNVVNHVPH 68
Query: 70 IG 71
          +G
Sbjct: 69 VG 70

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	71
1dwm_A	70	LUTI, linum usitatissinum trypsin inhibitor; serin	3e-30
1vbw_A	68	Trypsin inhibitor BGIT; BGTI, protein binding; HET	4e-30
1mit_A	69	RCMTI-V, trypsin inhibitor V; serine protease inhi	1e-29
3rdy_A	79	BWI-1=protease inhibitor/trypsin inhibitor; serine	1e-29
1to2_I	64	Chymotrypsin inhibitor 2; serine protease, hydrola	3e-28
1cse_I	70	Eglin C; complex(serine proteinase-inhibitor); 1.2	4e-28
2ci2_I	83	Chymotrypsin inhibitor 2; proteinase inhibitor (ch	4e-28
1hym_A	45	CMTI-V, hydrolyzed cucurbita maxima trypsin inhibi	4e-15
1cq4_A	47	Protein (serine proteinase inhibitor 2); serine pr	5e-09
1hym_B	26	CMTI-V, hydrolyzed cucurbita maxima trypsin inhibi	7e-06

>1dwm_A LUTI, linum usitatissinum trypsin inhibitor; serine proteinase inhibitor; NMR {Linum usitatissimum} SCOP: d.40.1.1 Length = 70

 Score =  100 bits (250), Expect = 3e-30
 Identities = 38/69 (55%), Positives = 45/69 (65%), Gaps = 1/69 (1%)

Query: 2  SSSCPAGKGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDH 61
          S  CP GK +WPELVG +G  AA  +  EN  V A  + E + +T DFRCDRV V VNDH
Sbjct: 2  SRRCP-GKNAWPELVGKSGNMAAATVERENRNVHAIVLKEGSAMTKDFRCDRVWVIVNDH 60

Query: 62 GIVTRVPRI 70
          G+VT VP I
Sbjct: 61 GVVTSVPHI 69

>1vbw_A Trypsin inhibitor BGIT; BGTI, protein binding; HET: TLA; 0.93A {Momordica charantia} Length = 68

 Score = 99.8 bits (249), Expect = 4e-30
 Identities = 37/69 (53%), Positives = 44/69 (63%), Gaps = 1/69 (1%)

Query: 3  SSCPAGKGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDHG 62
          S C  GK SWP+LVG  G AA  +I  ENP+V A  +   +  T DFRCDRVRV+V + G
Sbjct: 1  SRCQ-GKSSWPQLVGSTGAAAKAVIERENPRVRAVIIKVGSGATKDFRCDRVRVWVTERG 59

Query: 63 IVTRVPRIG 71
          IV R P IG
Sbjct: 60 IVARPPTIG 68

>1mit_A RCMTI-V, trypsin inhibitor V; serine protease inhibitor (RCMTI-V); NMR {Cucurbita maxima} SCOP: d.40.1.1 PDB: 1tin_A Length = 69

 Score = 98.7 bits (246), Expect = 1e-29
 Identities = 38/70 (54%), Positives = 46/70 (65%), Gaps = 1/70 (1%)

Query: 2  SSSCPAGKGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDH 61
           SSCP GK SWP LVG+ G  A  II  +NP V A  ++E   VT DFRC+RVR++VN  
Sbjct: 1  GSSCP-GKSSWPHLVGVGGSVAKAIIERQNPNVKAVILEEGTPVTKDFRCNRVRIWVNKR 59

Query: 62 GIVTRVPRIG 71
          G+V   PRIG
Sbjct: 60 GLVVSPPRIG 69

>3rdy_A BWI-1=protease inhibitor/trypsin inhibitor; serine protease inhibitor, potato inhibitor I, trypsin inhib trypsin, hydrolase inhibitor; 1.84A {Fagopyrum esculentum} PDB: 3rdz_C Length = 79

 Score = 99.1 bits (247), Expect = 1e-29
 Identities = 32/70 (45%), Positives = 38/70 (54%), Gaps = 1/70 (1%)

Query: 1  MSSSCPAGKGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVND 60
              C  GK  WPELVG  G  AA II  EN  V A  + E + V  D RCDRV VFV++
Sbjct: 10 HLRQCS-GKQEWPELVGERGSKAAKIIENENEDVRAIVLPEGSAVPRDLRCDRVWVFVDE 68

Query: 61 HGIVTRVPRI 70
           G+V   P +
Sbjct: 69 RGVVVDTPVV 78

>1to2_I Chymotrypsin inhibitor 2; serine protease, hydrolase; HET: CIT 15P; 1.30A {Hordeum vulgare subsp} SCOP: d.40.1.1 PDB: 1tm3_I* 1tm5_I* 1tm1_I* 1tm7_I* 1tm4_I* 1y4a_I* 1y4d_I 1tmg_I* 1lw6_I 1y3b_I* 1y1k_I* 1y34_I* 1y48_I* 1y3d_I* 1y3c_I* 1y33_I* 1to1_I* 1y3f_I* 3ci2_A 1coa_I ... Length = 64

 Score = 94.8 bits (236), Expect = 3e-28
 Identities = 25/63 (39%), Positives = 37/63 (58%)

Query: 9  KGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDHGIVTRVP 68
          K  WPELVG + E A  +I+ + P      +    IVT ++R DRVR+FV+    + +VP
Sbjct: 2  KTEWPELVGKSVEEAKKVILQDKPAAQIIVLPVGTIVTKEYRIDRVRLFVDRLDNIAQVP 61

Query: 69 RIG 71
          R+G
Sbjct: 62 RVG 64

>1cse_I Eglin C; complex(serine proteinase-inhibitor); 1.20A {Hirudo medicinalis} SCOP: d.40.1.1 PDB: 2sec_I 2tec_I 1egl_A 1tec_I 1acb_I 3tec_I 1sib_I 1sbn_I 1mee_I 1egp_A 1egp_B Length = 70

 Score = 94.8 bits (236), Expect = 4e-28
 Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 1/70 (1%)

Query: 3  SSCPAGKGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDH- 61
          +   +   S+PE+VG   + A        P+     + E + VT D R +RVRVF N   
Sbjct: 1  TEFGSELKSFPEVVGKTVDQAREYFTLHYPQYNVYFLPEGSPVTLDLRYNRVRVFYNPGT 60

Query: 62 GIVTRVPRIG 71
           +V  VP +G
Sbjct: 61 NVVNHVPHVG 70

>2ci2_I Chymotrypsin inhibitor 2; proteinase inhibitor (chymotrypsin); 2.00A {Hordeum vulgare} SCOP: d.40.1.1 PDB: 2sni_I Length = 83

 Score = 95.3 bits (237), Expect = 4e-28
 Identities = 25/71 (35%), Positives = 38/71 (53%)

Query: 1  MSSSCPAGKGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVND 60
           +      K  WPELVG + E A  +I+ + P+     +    IVT ++R DRVR+FV+ 
Sbjct: 13 GAGDRHNLKTEWPELVGKSVEEAKKVILQDKPEAQIIVLPVGTIVTMEYRIDRVRLFVDK 72

Query: 61 HGIVTRVPRIG 71
             +  VPR+G
Sbjct: 73 LDNIAEVPRVG 83

>1hym_A CMTI-V, hydrolyzed cucurbita maxima trypsin inhibitor V; hydrolase (serine proteinase); NMR {Cucurbita maxima} SCOP: d.40.1.1 Length = 45

 Score = 61.3 bits (149), Expect = 4e-15
 Identities = 23/44 (52%), Positives = 27/44 (61%), Gaps = 1/44 (2%)

Query: 3  SSCPAGKGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVT 46
          SSCP GK SWP LVG+ G  A  II  +NP V A  ++E   VT
Sbjct: 2  SSCP-GKSSWPHLVGVGGSVAKAIIERQNPNVKAVILEEGTPVT 44

>1cq4_A Protein (serine proteinase inhibitor 2); serine protease inhibitor, polyglutamine insertion mutant, subtilisin- chymotrypsin inhibitor-2; 1.80A {Hordeum vulgare} SCOP: d.40.1.1 Length = 47

 Score = 45.7 bits (108), Expect = 5e-09
 Identities = 14/42 (33%), Positives = 21/42 (50%)

Query: 9  KGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFR 50
          K  WPELVG + E A  +I+ + P+     +    IVT   +
Sbjct: 2  KTEWPELVGKSVEEAKKVILQDKPEAQIIVLPVGTIVTMGQQ 43

>1hym_B CMTI-V, hydrolyzed cucurbita maxima trypsin inhibitor V; hydrolase (serine proteinase); NMR {Cucurbita maxima} SCOP: d.40.1.1 Length = 26

 Score = 37.7 bits (87), Expect = 7e-06
 Identities = 15/24 (62%), Positives = 19/24 (79%)

Query: 48 DFRCDRVRVFVNDHGIVTRVPRIG 71
          DFRC+RVR++VN  G+V   PRIG
Sbjct: 1  DFRCNRVRIWVNKRGLVVSPPRIG 24

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	71
1mit_A	69	RCMTI-V, trypsin inhibitor V; serine protease inhi	100.0
1vbw_A	68	Trypsin inhibitor BGIT; BGTI, protein binding; HET	100.0
1dwm_A	70	LUTI, linum usitatissinum trypsin inhibitor; serin	100.0
1to2_I	64	Chymotrypsin inhibitor 2; serine protease, hydrola	100.0
3rdy_A	79	BWI-1=protease inhibitor/trypsin inhibitor; serine	100.0
2ci2_I	83	Chymotrypsin inhibitor 2; proteinase inhibitor (ch	100.0
1cse_I	70	Eglin C; complex(serine proteinase-inhibitor); 1.2	100.0
1cq4_A	47	Protein (serine proteinase inhibitor 2); serine pr	99.91
1hym_A	45	CMTI-V, hydrolyzed cucurbita maxima trypsin inhibi	99.82
1hym_B	26	CMTI-V, hydrolyzed cucurbita maxima trypsin inhibi	99.32

>1mit_A RCMTI-V, trypsin inhibitor V; serine protease inhibitor (RCMTI-V); NMR {Cucurbita maxima} SCOP: d.40.1.1 PDB: 1tin_A

Probab=100.00  E-value=2.8e-37  Score=179.80  Aligned_cols=69  Identities=55%  Similarity=1.012  Sum_probs=67.1

Q ss_pred             CCCCCCCCCcchhccCCCHHHHHHHHHHhCCCccEEEecCCceecCcccCCeeEEEECCCCcEEecccCC
Q 040548            2 SSSCPAGKGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDHGIVTRVPRIG   71 (71)
Q Consensus         2 ~~~c~~~k~~wpelVG~~~~~A~~~i~~~~p~~~vrvl~pg~~vTmDy~~~RV~v~vD~~g~V~~vP~iG   71 (71)
                      .|.|+ +|++||||||+++++|+.+|++|+|++.+|+|+||+++|||||++|||||+|++|+|+++|+||
T Consensus         1 ~~~c~-~K~sWpELVG~~~~~A~~~I~~d~p~v~v~vl~~g~~vT~Dfr~~RV~V~vD~~g~V~~vP~vG   69 (69)
T 1mit_A            1 GSSCP-GKSSWPHLVGVGGSVAKAIIERQNPNVKAVILEEGTPVTKDFRCNRVRIWVNKRGLVVSPPRIG   69 (69)
T ss_dssp             CCCCS-SCSCCCCCTTSHHHHHHHHHHHHCTTSEEEEEETTCCCCSSCCTTEEEEEEETTTEEECCSSCC
T ss_pred             CCCCC-CcCcCHHHcCccHHHHHHHHHHHCCCCeEEEecCCCccCCCcCCCEEEEEECCCCcEEeCCcCC
Confidence            36798 9999999999999999999999999999999999999999999999999999999999999998

>1vbw_A Trypsin inhibitor BGIT; BGTI, protein binding; HET: TLA; 0.93A {Momordica charantia}

Probab=100.00  E-value=6e-37  Score=177.98  Aligned_cols=68  Identities=54%  Similarity=0.955  Sum_probs=66.4

Q ss_pred             CCCCCCCCcchhccCCCHHHHHHHHHHhCCCccEEEecCCceecCcccCCeeEEEECCCCcEEecccCC
Q 040548            3 SSCPAGKGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDHGIVTRVPRIG   71 (71)
Q Consensus         3 ~~c~~~k~~wpelVG~~~~~A~~~i~~~~p~~~vrvl~pg~~vTmDy~~~RV~v~vD~~g~V~~vP~iG   71 (71)
                      |.|+ +|++||||||+++++|+.+|++|+|++.+|+|++|+++|||||++|||||+|++|+|+++|+||
T Consensus         1 ~~c~-~K~sWpELVG~~~~~A~~~I~~d~p~~~v~vl~~g~~vT~Df~~~RV~v~vD~~g~V~~vP~vG   68 (68)
T 1vbw_A            1 SRCQ-GKSSWPQLVGSTGAAAKAVIERENPRVRAVIIKVGSGATKDFRCDRVRVWVTERGIVARPPTIG   68 (68)
T ss_dssp             CCSC-SCCBCGGGTTSBHHHHHHHHHHHCTTCEEEEEETTSCCCCSCCTTEEEEEECTTSBBCSCCEEC
T ss_pred             CCCC-CCCcCHHHCCcCHHHHHHHHHHHCCCCeEEEecCCCccCCCcCCCEEEEEECCCCcEEecCcCC
Confidence            5698 9999999999999999999999999999999999999999999999999999999999999998

>1dwm_A LUTI, linum usitatissinum trypsin inhibitor; serine proteinase inhibitor; NMR {Linum usitatissimum} SCOP: d.40.1.1

Probab=100.00  E-value=2.2e-36  Score=176.17  Aligned_cols=69  Identities=55%  Similarity=0.939  Sum_probs=66.9

Q ss_pred             CCCCCCCCCcchhccCCCHHHHHHHHHHhCCCccEEEecCCceecCcccCCeeEEEECCCCcEEecccCC
Q 040548            2 SSSCPAGKGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDHGIVTRVPRIG   71 (71)
Q Consensus         2 ~~~c~~~k~~wpelVG~~~~~A~~~i~~~~p~~~vrvl~pg~~vTmDy~~~RV~v~vD~~g~V~~vP~iG   71 (71)
                      ++.|+ +|++||||||+++++|+.+|++|+|++++|+|+||+++|||||++||||++|++|+|+++|+||
T Consensus         2 ~~~c~-~k~sWpelVG~~~~~A~~~i~~e~p~~~vrvl~pg~~vT~Dfr~~RV~v~vD~~g~V~~vP~ig   70 (70)
T 1dwm_A            2 SRRCP-GKNAWPELVGKSGNMAAATVERENRNVHAIVLKEGSAMTKDFRCDRVWVIVNDHGVVTSVPHIT   70 (70)
T ss_dssp             CCCCS-SCSBCGGGTTSBHHHHHHHHHHHCTTCEEEEEETTCCCCCSCCTTEEEEEECTTSBBCSCCBBC
T ss_pred             CCcCC-ChhHhHHHcCCcHHHHHHHHHHhCCCceEEEecCCCccCCccCCCeEEEEECCCCeEEeCCcCC
Confidence            45698 9999999999999999999999999999999999999999999999999999999999999998

>1to2_I Chymotrypsin inhibitor 2; serine protease, hydrolase; HET: CIT 15P; 1.30A {Hordeum vulgare subsp} SCOP: d.40.1.1 PDB: 1tm3_I* 1tm5_I* 1tm1_I* 1tm7_I* 1tm4_I* 1y4a_I* 1y4d_I 1tmg_I* 1lw6_I 1y3b_I* 1y1k_I* 1y34_I* 1y48_I* 1y3d_I* 1y3c_I* 1y33_I* 1to1_I* 1y3f_I* 3ci2_A 1coa_I ...

Probab=100.00  E-value=6e-35  Score=167.83  Aligned_cols=64  Identities=39%  Similarity=0.716  Sum_probs=62.3

Q ss_pred             CCCcchhccCCCHHHHHHHHHHhCCCccEEEecCCceecCcccCCeeEEEECCCCcEEecccCC
Q 040548            8 GKGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDHGIVTRVPRIG   71 (71)
Q Consensus         8 ~k~~wpelVG~~~~~A~~~i~~~~p~~~vrvl~pg~~vTmDy~~~RV~v~vD~~g~V~~vP~iG   71 (71)
                      .|++||||||+++++|+.+|++|+|++.+|+|++|+++||||||+|||||+|++|+|+++|+||
T Consensus         1 ~k~sWPELVG~~~~~A~~~I~~d~p~v~v~vl~~g~~vT~Df~~~RV~v~vD~~g~V~~vP~iG   64 (64)
T 1to2_I            1 MKTEWPELVGKSVEEAKKVILQDKPAAQIIVLPVGTIVTKEYRIDRVRLFVDRLDNIAQVPRVG   64 (64)
T ss_dssp             -CCBCGGGTTSBHHHHHHHHHHHCTTCEEEEEETTCEEECBCCTTEEEEEECTTSBBCSCCEEC
T ss_pred             CCcCCHhhCCCcHHHHHHHHHHHCCCCeEEEecCCCccCCCcCCCEEEEEECCCCeEEecCcCC
Confidence            4899999999999999999999999999999999999999999999999999999999999998

>3rdy_A BWI-1=protease inhibitor/trypsin inhibitor; serine protease inhibitor, potato inhibitor I, trypsin inhib trypsin, hydrolase inhibitor; 1.84A {Fagopyrum esculentum} SCOP: d.40.1.0 PDB: 3rdz_C

Probab=100.00  E-value=2.8e-34  Score=171.26  Aligned_cols=66  Identities=48%  Similarity=0.864  Sum_probs=64.2

Q ss_pred             CCCCCCCcchhccCCCHHHHHHHHHHhCCCccEEEecCCceecCcccCCeeEEEECCCCcEEecccC
Q 040548            4 SCPAGKGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDHGIVTRVPRI   70 (71)
Q Consensus         4 ~c~~~k~~wpelVG~~~~~A~~~i~~~~p~~~vrvl~pg~~vTmDy~~~RV~v~vD~~g~V~~vP~i   70 (71)
                      +|+ +|++||||||+++++|+++|++|+|+++++||+||+++||||||+|||||+|++|+|+++|+|
T Consensus        13 ~~~-~K~sWPELVG~~~~~A~~~I~~e~P~v~v~Vl~~Gs~VT~Dfr~~RVrV~VD~~g~V~~~P~i   78 (79)
T 3rdy_A           13 QCS-GKQEWPELVGERGSKAAKIIENENEDVRAIVLPEGSAVPRDLRCDRVWVFVDERGVVVDTPVV   78 (79)
T ss_dssp             CCC-SCCBCGGGTTSBHHHHHHHHHHHCTTCEEEEEETTCCCCSCCCSSEEEEEECTTSBBCSCCBB
T ss_pred             cCC-CCCcChHHCCcCHHHHHHHHHHHCCCCceEEeCCCCccCCccCCCEEEEEECCCCeEEeCcee
Confidence            476 999999999999999999999999999999999999999999999999999999999999997

>2ci2_I Chymotrypsin inhibitor 2; proteinase inhibitor (chymotrypsin); 2.00A {Hordeum vulgare} SCOP: d.40.1.1 PDB: 2sni_I

Probab=100.00  E-value=3e-34  Score=172.21  Aligned_cols=64  Identities=39%  Similarity=0.716  Sum_probs=63.3

Q ss_pred             CCCcchhccCCCHHHHHHHHHHhCCCccEEEecCCceecCcccCCeeEEEECCCCcEEecccCC
Q 040548            8 GKGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDHGIVTRVPRIG   71 (71)
Q Consensus         8 ~k~~wpelVG~~~~~A~~~i~~~~p~~~vrvl~pg~~vTmDy~~~RV~v~vD~~g~V~~vP~iG   71 (71)
                      +|++||||||+++++|+.+|++|+|++.+|||++|+++|||||++|||||+|++|+|+++|+||
T Consensus        20 ~K~sWPELVG~~~~~A~~~I~~d~p~v~vrVl~~G~~VT~Dfr~dRV~V~vD~~g~V~~vP~vG   83 (83)
T 2ci2_I           20 LKTEWPELVGKSVEEAKKVILQDKPEAQIIVLPVGTIVTMEYRIDRVRLFVDKLDNIAEVPRVG   83 (83)
T ss_dssp             CCCBCGGGTTSBHHHHHHHHHHHCTTCEEEEEETTCCCCSCCCTTEEEEEECTTSBBCSCCEEC
T ss_pred             ChhhhHHHcCCcHHHHHHHHHhhCCCCeEEEecCCCccCCCcCCCEEEEEECCCCcEEeCCcCC
Confidence            8999999999999999999999999999999999999999999999999999999999999998

>1cse_I Eglin C; complex(serine proteinase-inhibitor); 1.20A {Hirudo medicinalis} SCOP: d.40.1.1 PDB: 2sec_I 2tec_I 1egl_A 1tec_I 1acb_I 3tec_I 1sib_I 1sbn_I 1mee_I 1egp_A 1egp_B

Probab=100.00  E-value=3e-34  Score=167.41  Aligned_cols=64  Identities=34%  Similarity=0.540  Sum_probs=61.3

Q ss_pred             CCCcchhccCCCHHHHHHHHHHhCCCccEEEecCCceecCcccCCeeEEEEC-CCCcEEecccCC
Q 040548            8 GKGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVN-DHGIVTRVPRIG   71 (71)
Q Consensus         8 ~k~~wpelVG~~~~~A~~~i~~~~p~~~vrvl~pg~~vTmDy~~~RV~v~vD-~~g~V~~vP~iG   71 (71)
                      +|++||||||+++++|+.+|++|+|++.+|+|++|+++||||||+|||||+| ++|+|+++|+||
T Consensus         6 ~k~sWPELVG~~~~~A~~~I~~d~p~~~v~vl~~g~~vT~Df~~~RV~V~vD~~~g~V~~vP~iG   70 (70)
T 1cse_I            6 ELKSFPEVVGKTVDQAREYFTLHYPQYNVYFLPEGSPVTLDLRYNRVRVFYNPGTNVVNHVPHVG   70 (70)
T ss_dssp             --CBCGGGTTSBHHHHHHHHHHHCTTSEEEEEETTCCEECCCCTTEEEEEEETTTTEECSCCEEC
T ss_pred             CCCcCHHHcCccHHHHHHHHHHHCCCCeEEEecCCCccCCccCCCeEEEEEcCCCCEEEeCCcCC
Confidence            7999999999999999999999999999999999999999999999999999 999999999998

>1cq4_A Protein (serine proteinase inhibitor 2); serine protease inhibitor, polyglutamine insertion mutant, subtilisin- chymotrypsin inhibitor-2; 1.80A {Hordeum vulgare} SCOP: d.40.1.1

Probab=99.91  E-value=1.9e-25  Score=121.66  Aligned_cols=47  Identities=30%  Similarity=0.482  Sum_probs=36.6

Q ss_pred             CCCcchhccCCCHHHHHHHHHHhCCCccEEEecCCceecCcccCCee
Q 040548            8 GKGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRV   54 (71)
Q Consensus         8 ~k~~wpelVG~~~~~A~~~i~~~~p~~~vrvl~pg~~vTmDy~~~RV   54 (71)
                      .|++||||||+++++|+.+|++|||++.++||++|+++||||||||+
T Consensus         1 ~K~sWPELVG~~~~~A~~~I~~e~p~v~v~vl~~gs~vT~Df~~~R~   47 (47)
T 1cq4_A            1 MKTEWPELVGKSVEEAKKVILQDKPEAQIIVLPVGTIVTMGQQQQGM   47 (47)
T ss_dssp             -CCBCGGGTTSBHHHHHHHHHHHCTTCEEEEEETTCCC---------
T ss_pred             CCcCChhhcCccHHHHHHHHHHHCCCCEEEEeCCCCCcCcccCCCCC
Confidence            48999999999999999999999999999999999999999999996

>1hym_A CMTI-V, hydrolyzed cucurbita maxima trypsin inhibitor V; hydrolase (serine proteinase); NMR {Cucurbita maxima} SCOP: d.40.1.1

Probab=99.82  E-value=1.6e-20  Score=101.42  Aligned_cols=43  Identities=51%  Similarity=0.894  Sum_probs=41.5

Q ss_pred             CCCCCCCcchhccCCCHHHHHHHHHHhCCCccEEEecCCceecC
Q 040548            4 SCPAGKGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTA   47 (71)
Q Consensus         4 ~c~~~k~~wpelVG~~~~~A~~~i~~~~p~~~vrvl~pg~~vTm   47 (71)
                      +|+ +|++||||||+++++|+.+|++|||++.+.||++|+++|+
T Consensus         3 ~c~-~K~sWPELVG~~~~~A~~~I~~e~P~v~v~vl~~gs~vT~   45 (45)
T 1hym_A            3 SCP-GKSSWPHLVGVGGSVAKAIIERQNPNVKAVILEEGTPVTK   45 (45)
T ss_dssp             CCC-SCSBCCCCTTSCHHHHHHHHHHHCTTCEEEEEECCSCCCC
T ss_pred             CCC-CCCcChhhcCCcHHHHHHHHHHHCCCCeEEEecCCCcCCC
Confidence            398 9999999999999999999999999999999999999996

>1hym_B CMTI-V, hydrolyzed cucurbita maxima trypsin inhibitor V; hydrolase (serine proteinase); NMR {Cucurbita maxima} SCOP: d.40.1.1

Probab=99.32  E-value=8.4e-13  Score=63.74  Aligned_cols=24  Identities=63%  Similarity=1.270  Sum_probs=23.5

Q ss_pred             cccCCeeEEEECCCCcEEecccCC
Q 040548           48 DFRCDRVRVFVNDHGIVTRVPRIG   71 (71)
Q Consensus        48 Dy~~~RV~v~vD~~g~V~~vP~iG   71 (71)
                      ||+|+||+||+|++|+|+++|+||
T Consensus         1 Df~~~RVrvfvd~~g~V~~~P~iG   24 (26)
T 1hym_B            1 DFRCNRVRIWVNKRGLVVSPPRIG   24 (26)
T ss_dssp             CCCTTEEEEEEETTTEEECCSBCC
T ss_pred             CCCCCEEEEEECCCCcEEECCccc
Confidence            899999999999999999999998

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	71
g1hym.1	68	d.40.1.1 (A:,B:) Trypsin inhibitor V {Pumpkin (Cuc	6e-31
d1dwma_	69	d.40.1.1 (A:) Trypsin inhibitor LUTI {Flax (Linum	6e-30
d1to2i_	64	d.40.1.1 (I:) Chymotrypsin inhibitor CI-2 {Barley	6e-29
d1csei_	63	d.40.1.1 (I:) Eglin C {Leech (Hirudo medicinalis)	2e-26

>d1dwma_ d.40.1.1 (A:) Trypsin inhibitor LUTI {Flax (Linum usitatissimum) [TaxId: 4006]} Length = 69

class: Alpha and beta proteins (a+b)
fold: CI-2 family of serine protease inhibitors
superfamily: CI-2 family of serine protease inhibitors
family: CI-2 family of serine protease inhibitors
domain: Trypsin inhibitor LUTI
species: Flax (Linum usitatissimum) [TaxId: 4006]

 Score = 98.2 bits (245), Expect = 6e-30
 Identities = 38/69 (55%), Positives = 45/69 (65%), Gaps = 1/69 (1%)

Query: 2  SSSCPAGKGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDH 61
          S  CP GK +WPELVG +G  AA  +  EN  V A  + E + +T DFRCDRV V VNDH
Sbjct: 1  SRRCP-GKNAWPELVGKSGNMAAATVERENRNVHAIVLKEGSAMTKDFRCDRVWVIVNDH 59

Query: 62 GIVTRVPRI 70
          G+VT VP I
Sbjct: 60 GVVTSVPHI 68

>d1to2i_ d.40.1.1 (I:) Chymotrypsin inhibitor CI-2 {Barley (Hordeum vulgare) [TaxId: 4513]} Length = 64

class: Alpha and beta proteins (a+b)
fold: CI-2 family of serine protease inhibitors
superfamily: CI-2 family of serine protease inhibitors
family: CI-2 family of serine protease inhibitors
domain: Chymotrypsin inhibitor CI-2
species: Barley (Hordeum vulgare) [TaxId: 4513]

 Score = 95.5 bits (238), Expect = 6e-29
 Identities = 25/63 (39%), Positives = 37/63 (58%)

Query: 9  KGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDHGIVTRVP 68
          K  WPELVG + E A  +I+ + P      +    IVT ++R DRVR+FV+    + +VP
Sbjct: 2  KTEWPELVGKSVEEAKKVILQDKPAAQIIVLPVGTIVTKEYRIDRVRLFVDRLDNIAQVP 61

Query: 69 RIG 71
          R+G
Sbjct: 62 RVG 64

>d1csei_ d.40.1.1 (I:) Eglin C {Leech (Hirudo medicinalis) [TaxId: 6421]} Length = 63

class: Alpha and beta proteins (a+b)
fold: CI-2 family of serine protease inhibitors
superfamily: CI-2 family of serine protease inhibitors
family: CI-2 family of serine protease inhibitors
domain: Eglin C
species: Leech (Hirudo medicinalis) [TaxId: 6421]

 Score = 89.0 bits (221), Expect = 2e-26
 Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 1/62 (1%)

Query: 11 SWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDH-GIVTRVPR 69
          S+PE+VG   + A        P+     + E + VT D R +RVRVF N    +V  VP 
Sbjct: 2  SFPEVVGKTVDQAREYFTLHYPQYNVYFLPEGSPVTLDLRYNRVRVFYNPGTNVVNHVPH 61

Query: 70 IG 71
          +G
Sbjct: 62 VG 63

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	71
g1hym.1	68	Trypsin inhibitor V {Pumpkin (Cucurbita maxima) [T	100.0
d1dwma_	69	Trypsin inhibitor LUTI {Flax (Linum usitatissimum)	100.0
d1to2i_	64	Chymotrypsin inhibitor CI-2 {Barley (Hordeum vulga	100.0
d1csei_	63	Eglin C {Leech (Hirudo medicinalis) [TaxId: 6421]}	99.97
d1pyya1	61	Penicillin-binding protein 2x (pbp-2x), c-terminal	94.04
d1pyya2	58	Penicillin-binding protein 2x (pbp-2x), c-terminal	90.78

>d1dwma_ d.40.1.1 (A:) Trypsin inhibitor LUTI {Flax (Linum usitatissimum) [TaxId: 4006]}

class: Alpha and beta proteins (a+b)
fold: CI-2 family of serine protease inhibitors
superfamily: CI-2 family of serine protease inhibitors
family: CI-2 family of serine protease inhibitors
domain: Trypsin inhibitor LUTI
species: Flax (Linum usitatissimum) [TaxId: 4006]

Probab=100.00  E-value=4.1e-36  Score=173.85  Aligned_cols=68  Identities=56%  Similarity=0.958  Sum_probs=66.3

Q ss_pred             CCCCCCCCCcchhccCCCHHHHHHHHHHhCCCccEEEecCCceecCcccCCeeEEEECCCCcEEecccC
Q 040548            2 SSSCPAGKGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDHGIVTRVPRI   70 (71)
Q Consensus         2 ~~~c~~~k~~wpelVG~~~~~A~~~i~~~~p~~~vrvl~pg~~vTmDy~~~RV~v~vD~~g~V~~vP~i   70 (71)
                      ++.|| ||++||||||+++++|+++|++|||++++.+|++|+++|+|||||||+||+|++|+|+++|+|
T Consensus         1 ~~~C~-gK~sWPELVG~~~~~A~~~I~~enp~v~v~v~~~gs~vt~Dfr~~RVrv~Vd~~g~V~~~P~I   68 (69)
T d1dwma_           1 SRRCP-GKNAWPELVGKSGNMAAATVERENRNVHAIVLKEGSAMTKDFRCDRVWVIVNDHGVVTSVPHI   68 (69)
T ss_dssp             CCCCS-SCSBCGGGTTSBHHHHHHHHHHHCTTCEEEEEETTCCCCCSCCTTEEEEEECTTSBBCSCCBB
T ss_pred             CCcCC-CCCcCHHHCCCCHHHHHHHHHHHCCCceEEEeeCCCcccCcccCCEEEEEECCCCcEEecccc
Confidence            56899 999999999999999999999999999999999999999999999999999999999999998

>d1to2i_ d.40.1.1 (I:) Chymotrypsin inhibitor CI-2 {Barley (Hordeum vulgare) [TaxId: 4513]}

class: Alpha and beta proteins (a+b)
fold: CI-2 family of serine protease inhibitors
superfamily: CI-2 family of serine protease inhibitors
family: CI-2 family of serine protease inhibitors
domain: Chymotrypsin inhibitor CI-2
species: Barley (Hordeum vulgare) [TaxId: 4513]

Probab=100.00  E-value=3.3e-34  Score=163.80  Aligned_cols=63  Identities=40%  Similarity=0.746  Sum_probs=62.3

Q ss_pred             CCcchhccCCCHHHHHHHHHHhCCCccEEEecCCceecCcccCCeeEEEECCCCcEEecccCC
Q 040548            9 KGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVNDHGIVTRVPRIG   71 (71)
Q Consensus         9 k~~wpelVG~~~~~A~~~i~~~~p~~~vrvl~pg~~vTmDy~~~RV~v~vD~~g~V~~vP~iG   71 (71)
                      |++||||||+++++|+++|++|+|++++.+++.|+++|+|||||||+||+|++|+|+++|+||
T Consensus         2 K~sWPELVG~~~~~Ak~~I~~e~p~v~v~v~p~gs~vt~Dfr~~RVrv~Vd~~g~V~~~P~iG   64 (64)
T d1to2i_           2 KTEWPELVGKSVEEAKKVILQDKPAAQIIVLPVGTIVTKEYRIDRVRLFVDRLDNIAQVPRVG   64 (64)
T ss_dssp             CCBCGGGTTSBHHHHHHHHHHHCTTCEEEEEETTCEEECBCCTTEEEEEECTTSBBCSCCEEC
T ss_pred             CccChhhcCCCHHHHHHHHHHhCCCceEEEecCCCcccCcccCCEEEEEECCCCeEEeCCCCC
Confidence            899999999999999999999999999999999999999999999999999999999999998

>d1csei_ d.40.1.1 (I:) Eglin C {Leech (Hirudo medicinalis) [TaxId: 6421]}

class: Alpha and beta proteins (a+b)
fold: CI-2 family of serine protease inhibitors
superfamily: CI-2 family of serine protease inhibitors
family: CI-2 family of serine protease inhibitors
domain: Eglin C
species: Leech (Hirudo medicinalis) [TaxId: 6421]

Probab=99.97  E-value=8.4e-33  Score=157.51  Aligned_cols=62  Identities=35%  Similarity=0.569  Sum_probs=60.5

Q ss_pred             CcchhccCCCHHHHHHHHHHhCCCccEEEecCCceecCcccCCeeEEEECC-CCcEEecccCC
Q 040548           10 GSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTADFRCDRVRVFVND-HGIVTRVPRIG   71 (71)
Q Consensus        10 ~~wpelVG~~~~~A~~~i~~~~p~~~vrvl~pg~~vTmDy~~~RV~v~vD~-~g~V~~vP~iG   71 (71)
                      +|||||||+++++|+++|++|||++++.++++|+++|+|||||||+||+|+ +|+|+++|+||
T Consensus         1 ~SWPELVG~~~~~A~~~I~~e~p~v~v~v~p~gs~vt~Dfr~~RVrv~Vd~~~g~V~~~P~iG   63 (63)
T d1csei_           1 KSFPEVVGKTVDQAREYFTLHYPQYNVYFLPEGSPVTLDLRYNRVRVFYNPGTNVVNHVPHVG   63 (63)
T ss_dssp             CBCGGGTTSBHHHHHHHHHHHCTTSEEEEEETTCCEECCCCTTEEEEEEETTTTEECSCCEEC
T ss_pred             CCChhhcCCCHHHHHHHHHHHCCCceEEEEeCCCcccCcccCCEEEEEEECCCCEEEeCCCCC
Confidence            689999999999999999999999999999999999999999999999996 89999999998

>d1pyya1 d.11.1.1 (A:632-692) Penicillin-binding protein 2x (pbp-2x), c-terminal domain {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a+b)
fold: Penicillin-binding protein 2x (pbp-2x), c-terminal domain
superfamily: Penicillin-binding protein 2x (pbp-2x), c-terminal domain
family: Penicillin-binding protein 2x (pbp-2x), c-terminal domain
domain: Penicillin-binding protein 2x (pbp-2x), c-terminal domain
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=94.04  E-value=0.08  Score=27.59  Aligned_cols=49  Identities=10%  Similarity=0.100  Sum_probs=34.0

Q ss_pred             CCcchhccCCCHHHHHHHHHHhCCCccEEEecCCceecCc--------ccCCeeEEEEC
Q 040548            9 KGSWPELVGMNGEAAAHIIMAENPKVGATTVDENAIVTAD--------FRCDRVRVFVN   59 (71)
Q Consensus         9 k~~wpelVG~~~~~A~~~i~~~~p~~~vrvl~pg~~vTmD--------y~~~RV~v~vD   59 (71)
                      .-.-|+|+|++..+|.+.+++.  ++.++++..|..|+.-        -...+|.|+.|
T Consensus         4 ~~~vP~v~g~s~~~A~~~L~~~--gl~~~v~G~G~~V~~QsP~~G~~v~~g~~V~L~T~   60 (61)
T d1pyya1           4 PYPMPSVKDISPGDLAEELRRN--LVQPIVVGTGTKIKNSSAEEGKNLAPNQQVLILSD   60 (61)
T ss_dssp             CCBCCCCSSCCHHHHHHHHHHT--TCEEEEESSCSSEEEESSCTTCBCCTTCEEEEEES
T ss_pred             cccCCcccCCCHHHHHHHHHHC--CCeEEEecCCCEEEEEccCCCcccCCCCEEEEEeC
Confidence            3567899999999999887766  5667777777655322        23456666655

>d1pyya2 d.11.1.1 (A:693-750) Penicillin-binding protein 2x (pbp-2x), c-terminal domain {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a+b)
fold: Penicillin-binding protein 2x (pbp-2x), c-terminal domain
superfamily: Penicillin-binding protein 2x (pbp-2x), c-terminal domain
family: Penicillin-binding protein 2x (pbp-2x), c-terminal domain
domain: Penicillin-binding protein 2x (pbp-2x), c-terminal domain
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=90.78  E-value=0.2  Score=25.57  Aligned_cols=32  Identities=13%  Similarity=0.150  Sum_probs=23.3

Q ss_pred             CcchhccCCCHHHHHHHHHHhCCCccEEEecCCc
Q 040548           10 GSWPELVGMNGEAAAHIIMAENPKVGATTVDENA   43 (71)
Q Consensus        10 ~~wpelVG~~~~~A~~~i~~~~p~~~vrvl~pg~   43 (71)
                      ..-|+|+|++..+|...++..  ++.+.+...|.
T Consensus         2 ~evPdl~G~s~~~A~~~l~~~--gl~v~~~g~g~   33 (58)
T d1pyya2           2 EEVPDMYGWTKETAETLAKWL--NIELEFQGSGS   33 (58)
T ss_dssp             CBCCCCTTCBHHHHHHHHHHT--TCEEEEESCCS
T ss_pred             CcCCCcCCCcHHHHHHHHHHc--CCEEEEecCce
Confidence            567999999999999877665  45555554443