Citrus Sinensis ID: 040581

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390----
MASPSSQFLLFLCFIFLVNASVNSVAIPVVKDVSTLQYVAKIHHGVSQVPINLVLDLGGPLTWVDCDSSADVSSSSSRRLIPSQSIQCSRSGKSPVPGNGSDTTTNTCGVFTQNGISGLVTTGDLAEDTIAVRSELEDPSITAVDQFLFSCAPTFLLQGLARGARGMLGLGRAPISLPSQLATGIGHQRKFFMCLSSSNGVVLSHHTSTTKLPLMYTPLIGKSQDYFINVKSIKINGNPLSVTIEGLTKLSTIVPYATMESSIYATFAKAFTKAAAAASRDMSVVAPVAPFSLCFSSKGFNGSAVPVIDFVLQSEMVKWRFYGSNSMVKVNEEVVCLGFLDGGSDLTSSIVLGGFQLEDNVMDFDLGTSMLGFSTLRGTCCSDFSPNSVLDESL
cccccHHHHHHHHHHHHHccccccEEEccccccccccEEEEEEEcccccEEEEEEEcccccEEEccccccccccccccccccccccccccccccccccccccccccccccEEEccccccEEEEEEEEEEEEEccccccccccccccEEEEcccccccccccccccEEEEcccccccHHHHHccccccccEEEEccccccccEEcccccccccccEEcccccccccccEEEEEEEEccEEEcccccccccccEEEEccccccHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccEEEEEEEcccEEEEEccccEEEEEcccEEEEEEEEcccccccEEEEEcEEEEEcEEEEEccccEEEEEEccccccccccccccccccc
cccHHHHHHHHHHHHHHHccccccEEEEEcccccccEEEEEEEcccccccEEEEEEccccEEEEEccccccccccccccccccccccccccccccccccccccccccEEEEEEccccccccccEEEEEEEEEEcccccccEEEcccEEEEcccccccccccccccEEEEcccccccHHHHHHHHcccccEEEEEEcccccEEEEccccccccccEEccccccccEEEEEEEEEEEccEEEEccccccEEEcccccEEEccHHHHHHHHHHHHHHHHccccccccccccccccEEEcccccccccccEEEEEEEcccEEEEEccccEEEEccccEEEEEEEccccccccEEEEEcEEEcccEEEEEccccEEEEccccccccccEEEEEEccccc
MASPSSQFLLFLCFIFLVNasvnsvaipvvkdvstLQYVAKIHHGVSQVPINLVldlggpltwvdcdssadvsssssrrlipsqsiqcsrsgkspvpgngsdtttntcgvftqngisglvttgdlaedTIAVrseledpsitaVDQFLFSCAPTFLLQGLARGARGmlglgrapislpsqlatgighqRKFFMCLsssngvvlshhtsttklplmytpligksqdyFINVKsikingnplsvTIEGLTKlstivpyatmesSIYATFAKAFTKAAAAASrdmsvvapvapfslcfsskgfngsavpvIDFVLQSEMVKWrfygsnsmvkVNEEVVCLGfldggsdltssivlggfqlednvmdfdlgtsmlgfstlrgtccsdfspnsvldesl
MASPSSQFLLFLCFIFLVNASVNSVAIPVVKDVSTLQYVAKIHHGVSQVPINLVLDLGGPLTWVDCDSSadvsssssrrlipsqsiqcsrsgkspvpgngsdTTTNTCGVFTQNGISGLVTTGDLAEDTIAVRSELEDPSITAVDQFLFSCAPTFLLQGLARGARGMLGLGRAPISLPSQLATGIGHQRKFFMCLSSSNGVVLSHHTSTTKLPLMYTPLIGKSQDYFINVKSIKINGNPLSVTIEGLTKLSTIVPYATMESSIYATFAKAFTKAAAAASRDMSVVAPVAPFSLCFSSKGFNGSAVPVIDFVLQSEMVKWRFYGSNSMVKVNEEVVCLGFLDGGSDLTSSIVLGGFQLEDNVMDFDLGTSMLGFSTLrgtccsdfspnsvldesl
MASPSSQFLLFLCFIFLVNASVNSVAIPVVKDVSTLQYVAKIHHGVSQVPINLVLDLGGPLTWVDCDssadvsssssrrlipsqsIQCSRSGKSPVPGNGSDTTTNTCGVFTQNGISGLVTTGDLAEDTIAVRSELEDPSITAVDQFLFSCAPTFllqglargargmlglgraPISLPSQLATGIGHQRKFFMCLSSSNGVVLSHHTSTTKLPLMYTPLIGKSQDYFINVKSIKINGNPLSVTIEGLTKLSTIVPYATMESSIYatfakaftkaaaaaSRDMSVVAPVAPFSLCFSSKGFNGSAVPVIDFVLQSEMVKWRFYGSNSMVKVNEEVVCLGFLDGGSDLTSSIVLGGFQLEDNVMDFDLGTSMLGFSTLRGTCCSDFSPNSVLDESL
*******FLLFLCFIFLVNASVNSVAIPVVKDVSTLQYVAKIHHGVSQVPINLVLDLGGPLTWVDCD**************************************NTCGVFTQNGISGLVTTGDLAEDTIAVRSELEDPSITAVDQFLFSCAPTFLLQGLARGARGMLGLGRAPISLPSQLATGIGHQRKFFMCLSSSNGVVLSHHTSTTKLPLMYTPLIGKSQDYFINVKSIKINGNPLSVTIEGLTKLSTIVPYATMESSIYATFAKAFTKAAAAASRDMSVVAPVAPFSLCFSSKGFNGSAVPVIDFVLQSEMVKWRFYGSNSMVKVNEEVVCLGFLDGGSDLTSSIVLGGFQLEDNVMDFDLGTSMLGFSTLRGTCCSDF**********
*****SQ*LLFLCFIFLVNA*******PVVKDVSTLQYVAKIHHGVSQVPINLVLDLGGPLTWVDCDSSADVS**S******SQS*QCSR****************TCGVFTQNGISGLVTTGDLAEDTIAVRSELEDPSITAVDQFLFSCAPTFLLQGLARGARGMLGLGRAPISLPSQLATGIGHQRKFFMCLSSSNGVVLSHHTSTTKLPLMYTPLIGKSQDYFINVKSIKINGNPLSVTIEGLTKLSTIVPYATMESSIYATFAKAFTKAAA***********VAPFSLCFSSKGFNGSAVPVIDFVLQSEMVKWRFYGSNSMVKVNEEVVCLGFLDGGSDLTSSIVLGGFQLEDNVMDFDLGTSMLGFSTLRGTCCSDFS*********
MASPSSQFLLFLCFIFLVNASVNSVAIPVVKDVSTLQYVAKIHHGVSQVPINLVLDLGGPLTWVDCD*********************************SDTTTNTCGVFTQNGISGLVTTGDLAEDTIAVRSELEDPSITAVDQFLFSCAPTFLLQGLARGARGMLGLGRAPISLPSQLATGIGHQRKFFMCLSSSNGVVLSHHTSTTKLPLMYTPLIGKSQDYFINVKSIKINGNPLSVTIEGLTKLSTIVPYATMESSIYATFAKAF**********MSVVAPVAPFSLCFSSKGFNGSAVPVIDFVLQSEMVKWRFYGSNSMVKVNEEVVCLGFLDGGSDLTSSIVLGGFQLEDNVMDFDLGTSMLGFSTLRGTCCSDFSPNSVLDESL
**SPSSQFLLFLCFIFLVNASVNSVAIPVVKDVSTLQYVAKIHHGVSQVPINLVLDLGGPLTWVDCDSSADVSSSSSRRLIPSQSIQCSRSGKSPVPGNGSDTTTNTCGVFTQNGISGLVTTGDLAEDTIAVRSELEDPSITAVDQFLFSCAPTFLLQGLARGARGMLGLGRAPISLPSQLATGIGHQRKFFMCLSSSNGVVLSHHTSTTKLPLMYTPLIGKSQDYFINVKSIKINGNPLSVTIEGLTKLSTIVPYATMESSIYATFAKAFTKAAAAASRDMSVVAPVAPFSLCFSSKGFNGSAVPVIDFVLQSEMVKWRFYGSNSMVKVNEEVVCLGFLDGGSDLTSSIVLGGFQLEDNVMDFDLGTSMLGFSTLRGTCCSDFSPNSVL****
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MASPSSQFLLFLCFIFLVNASVNSVAIPVVKDVSTLQYVAKIHHGVSQVPINLVLDLGGPLTWVDCDSSADVSSSSSRRLIPSQSIQCSRSGKSPVPGNGSDTTTNTCGVFTQNGISGLVTTGDLAEDTIAVRSELEDPSITAVDQFLFSCAPTFLLQGLARGARGMLGLGRAPISLPSQLATGIGHQRKFFMCLSSSNGVVLSHHTSTTKLPLMYTPLIGKSQDYFINVKSIKINGNPLSVTIEGLTKLSTIVPYATMESSIYATFAKAFTKAAAAASRDMSVVAPVAPFSLCFSSKGFNGSAVPVIDFVLQSEMVKWRFYGSNSMVKVNEEVVCLGFLDGGSDLTSSIVLGGFQLEDNVMDFDLGTSMLGFSTLRGTCCSDFSPNSVLDESL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query394 2.2.26 [Sep-21-2011]
P13917427 Basic 7S globulin OS=Glyc no no 0.941 0.868 0.342 2e-48
Q8RVH5433 Basic 7S globulin 2 OS=Gl no no 0.888 0.808 0.344 4e-47
Q766C2438 Aspartic proteinase nepen N/A no 0.758 0.682 0.236 7e-07
Q6XBF8437 Aspartic proteinase CDR1 no no 0.723 0.652 0.258 1e-05
Q766C3437 Aspartic proteinase nepen N/A no 0.812 0.732 0.216 4e-05
Q9S9K4475 Aspartic proteinase-like no no 0.804 0.667 0.214 0.0001
Q3EBM5447 Probable aspartic proteas no no 0.794 0.700 0.236 0.0001
>sp|P13917|7SB1_SOYBN Basic 7S globulin OS=Glycine max GN=BG PE=1 SV=2 Back     alignment and function desciption
 Score =  193 bits (491), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 143/417 (34%), Positives = 204/417 (48%), Gaps = 46/417 (11%)

Query: 5   SSQFLLFLCFIFLVNASVNSVAIPVVKDVSTLQYVAKIHHGVSQVPINLVLDLGGPLTWV 64
           S  FL FL         +N V +PV  D ST  + A +      + + +++DL G   WV
Sbjct: 14  SCSFLFFLSDSVTPTKPINLVVLPVQNDGSTGLHWANLQKRTPLMQVPVLVDLNGNHLWV 73

Query: 65  DCDSSADVSSSSSRRLIPSQSIQCSRSGK----SPVPGNGSDTTTNTCGVFTQNGISGLV 120
           +C+      SS + +     S QCSR+      S    +      NTCG+ + N I+   
Sbjct: 74  NCEQQY---SSKTYQAPFCHSTQCSRANTHQCLSCPAASRPGCHKNTCGLMSTNPITQQT 130

Query: 121 TTGDLAEDTIAVR----SELEDPSITAVDQFLFSCAPTFLLQ-GLARGARGMLGLGRAPI 175
             G+L ED +A+     S  +   +  V QFLFSCAP+FL+Q GL R  +G+ GLG API
Sbjct: 131 GLGELGEDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSFLVQKGLPRNTQGVAGLGHAPI 190

Query: 176 SLPSQLATGIGHQRKFFMCLS---SSNGVVL---------SHHTSTTKLPLMYTPL-IGK 222
           SLP+QLA+  G QR+F  CLS   +S G ++                   L +TPL I  
Sbjct: 191 SLPNQLASHFGLQRQFTTCLSRYPTSKGAIIFGDAPNNMRQFQNQDIFHDLAFTPLTITL 250

Query: 223 SQDYFINVKSIKING------NPLSVTI----EGLTKLSTIVPYATMESSIYATFAKAFT 272
             +Y + V SI+IN       N +S TI     G T +ST  P+  ++ S+Y  F + F 
Sbjct: 251 QGEYNVRVNSIRINQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFA 310

Query: 273 KAAAAASRDMSVVAPVAPFSLCFSSKGFNGSAVPVIDFVL-QSEMVKWRFYGSNSMVKVN 331
           +     ++    V  VAPF LCF+S   N  A P +D V+ +     WR  G + MV+  
Sbjct: 311 QQLPKQAQ----VKSVAPFGLCFNSNKIN--AYPSVDLVMDKPNGPVWRISGEDLMVQAQ 364

Query: 332 EEVVCLGFLDGGSDLTSSIVLGGFQLEDNVMDFDLGTSMLGFST----LRGTCCSDF 384
             V CLG ++GG    + I LG  QLE+N++ FDL  S +GFST      G  C+D 
Sbjct: 365 PGVTCLGVMNGGMQPRAEITLGARQLEENLVVFDLARSRVGFSTSSLHSHGVKCADL 421
Seed storage protein. Has a protein kinase activity. Binds leginsulin.
Glycine max (taxid: 3847)
>sp|Q8RVH5|7SBG2_SOYBN Basic 7S globulin 2 OS=Glycine max PE=1 SV=1 Back     alignment and function description
>sp|Q766C2|NEP2_NEPGR Aspartic proteinase nepenthesin-2 OS=Nepenthes gracilis GN=nep2 PE=1 SV=1 Back     alignment and function description
>sp|Q6XBF8|CDR1_ARATH Aspartic proteinase CDR1 OS=Arabidopsis thaliana GN=CDR1 PE=1 SV=1 Back     alignment and function description
>sp|Q766C3|NEP1_NEPGR Aspartic proteinase nepenthesin-1 OS=Nepenthes gracilis GN=nep1 PE=1 SV=1 Back     alignment and function description
>sp|Q9S9K4|ASPL2_ARATH Aspartic proteinase-like protein 2 OS=Arabidopsis thaliana GN=At1g65240 PE=1 SV=2 Back     alignment and function description
>sp|Q3EBM5|ASPR1_ARATH Probable aspartic protease At2g35615 OS=Arabidopsis thaliana GN=At2g35615 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query394
255552235411 basic 7S globulin 2 precursor small subu 0.911 0.873 0.537 1e-99
224100331437 predicted protein [Populus trichocarpa] 0.941 0.848 0.503 1e-92
225432540388 PREDICTED: basic 7S globulin-like [Vitis 0.936 0.951 0.517 1e-90
356563517425 PREDICTED: basic 7S globulin-like [Glyci 0.934 0.865 0.479 4e-85
358249022414 uncharacterized protein LOC100806719 pre 0.901 0.857 0.493 5e-84
225436984436 PREDICTED: basic 7S globulin [Vitis vini 0.898 0.811 0.453 3e-80
147857949436 hypothetical protein VITISV_038701 [Viti 0.898 0.811 0.453 4e-80
285741433 EDGP precursor [Daucus carota] 0.939 0.854 0.452 3e-77
384482418413 Chain A, Crystal Structure Of Xeg-Edgp g 0.895 0.854 0.458 2e-76
384482417413 Chain A, Crystal Structure Of Edgp 0.895 0.854 0.458 2e-76
>gi|255552235|ref|XP_002517162.1| basic 7S globulin 2 precursor small subunit, putative [Ricinus communis] gi|223543797|gb|EEF45325.1| basic 7S globulin 2 precursor small subunit, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  369 bits (948), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 209/389 (53%), Positives = 262/389 (67%), Gaps = 30/389 (7%)

Query: 18  VNASVNSVAIPVVKDVSTLQYVAKIHHGVSQVPINLVLDLGGPLTWVDCDSSADVSSSSS 77
           +++S +S  +PV KD+STLQY+ +I+HG  Q+P NLV+DL G   W+DC SS  VSSS  
Sbjct: 22  ISSSPDSFHLPVTKDLSTLQYITRINHGALQIPTNLVIDLDGAHLWLDCASSEQVSSS-- 79

Query: 78  RRLIPSQSIQCSRSGKSPVPGNGSDTTTNTCGVFTQNGISGLVTTGDLAEDTIAVRSELE 137
            RLIPS SIQCS +     PG+ S    ++C +FTQNGI  LV TG+L ED +A+ S   
Sbjct: 80  LRLIPSCSIQCSMAK----PGHKSCNHHSSCDIFTQNGIIQLVKTGELVEDVLAIPSVDG 135

Query: 138 DPSIT--AVDQFLFSCAPTFLLQGLARGARGMLGLGRAPISLPSQLATGIGHQRKFFMCL 195
             S T   ++ F+ +CAP  LL GLA GA+GMLGLGR+ I+L SQLA      RKF  CL
Sbjct: 136 SNSGTNFEIENFILACAPATLLDGLASGAQGMLGLGRSKIALQSQLAARFDFHRKFATCL 195

Query: 196 SSSNGVVLSHHTSTTKLP-------LMYTPLI----GKSQDYFINVKSIKINGNPLSVTI 244
           SSSNGV+L  +  +  +        L Y+PL+    G S +YFI V+SIKING  L++  
Sbjct: 196 SSSNGVILFGNVGSDSISDPEILRSLSYSPLVTKPDGSSLEYFIEVRSIKINGKKLALGQ 255

Query: 245 EGL--TKLSTIVPYATMESSIYATFAKAFTKAAAAASRDMSVVAPVAPFSLCFSSKGFN- 301
           EG+  TK+STIVPY T+ESSIY TF KA+ KAA   S ++  VA VAPF LCFSSKG   
Sbjct: 256 EGIGFTKISTIVPYTTLESSIYETFIKAYLKAAN--SMNLIRVASVAPFGLCFSSKGIER 313

Query: 302 ---GSAVPVIDFVLQSEMVKWRFYGSNSMVKVNEEVVCLGFLDGGSDLTSSIVLGGFQLE 358
              G  VP ID VLQSEMVKWR +G NSMV+VN+E +CLGFLDGG D  +SIV+GG QLE
Sbjct: 314 SILGPNVPAIDLVLQSEMVKWRLHGGNSMVEVNDEAMCLGFLDGGLDPKNSIVIGGLQLE 373

Query: 359 DNVMDFDLGTSMLGFS---TLRGTCCSDF 384
           D +++FDLGTSMLGFS     R T CS+F
Sbjct: 374 DTLLEFDLGTSMLGFSLPLLQRQTSCSNF 402

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224100331|ref|XP_002311834.1| predicted protein [Populus trichocarpa] gi|222851654|gb|EEE89201.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225432540|ref|XP_002280508.1| PREDICTED: basic 7S globulin-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|356563517|ref|XP_003550008.1| PREDICTED: basic 7S globulin-like [Glycine max] Back     alignment and taxonomy information
>gi|358249022|ref|NP_001239980.1| uncharacterized protein LOC100806719 precursor [Glycine max] gi|255646101|gb|ACU23537.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|225436984|ref|XP_002272235.1| PREDICTED: basic 7S globulin [Vitis vinifera] Back     alignment and taxonomy information
>gi|147857949|emb|CAN80378.1| hypothetical protein VITISV_038701 [Vitis vinifera] Back     alignment and taxonomy information
>gi|285741|dbj|BAA03413.1| EDGP precursor [Daucus carota] Back     alignment and taxonomy information
>gi|384482418|pdb|3VLB|A Chain A, Crystal Structure Of Xeg-Edgp gi|384482420|pdb|3VLB|C Chain C, Crystal Structure Of Xeg-Edgp Back     alignment and taxonomy information
>gi|384482417|pdb|3VLA|A Chain A, Crystal Structure Of Edgp Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query394
TAIR|locus:2014475433 AT1G03220 [Arabidopsis thalian 0.411 0.374 0.430 1.4e-54
TAIR|locus:2182187386 AT5G19120 [Arabidopsis thalian 0.913 0.932 0.368 2.4e-53
TAIR|locus:2014465434 AT1G03230 [Arabidopsis thalian 0.411 0.373 0.436 5.4e-53
TAIR|locus:2182182405 AT5G19110 [Arabidopsis thalian 0.936 0.911 0.300 2.4e-35
TAIR|locus:2179614391 AT5G19100 [Arabidopsis thalian 0.5 0.503 0.410 3.9e-35
TAIR|locus:2166061406 AT5G48430 [Arabidopsis thalian 0.416 0.403 0.317 6.7e-19
TAIR|locus:2087790461 NANA "NANA" [Arabidopsis thali 0.847 0.724 0.229 3.7e-07
TAIR|locus:2145954437 CDR1 "CONSTITUTIVE DISEASE RES 0.733 0.661 0.227 1.2e-06
TAIR|locus:2183730474 AT5G10770 "AT5G10770" [Arabido 0.852 0.708 0.200 3.9e-06
TAIR|locus:2045615527 AT2G42980 [Arabidopsis thalian 0.385 0.288 0.259 4.3e-06
TAIR|locus:2014475 AT1G03220 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 338 (124.0 bits), Expect = 1.4e-54, Sum P(2) = 1.4e-54
 Identities = 78/181 (43%), Positives = 110/181 (60%)

Query:   222 KSQDYFINV-------KSIKINGNPLSVTIE---GLTKLSTIVPYATMESSIYXXXXXXX 271
             KS +YFI V       K++ IN   L +      G TK+S++ PY  +ESSIY       
Sbjct:   250 KSSEYFIGVTAIQIVEKTVPINPTLLKINASTGIGGTKISSVNPYTVLESSIYNAFTSEF 309

Query:   272 XXXXXXXSRDMSVVAPVAPFSLCFSSKGFN----GSAVPVIDFVLQSEMVKWRFYGSNSM 327
                    +R +  VA V PF  CFS+K       G AVP I+ VL S+ V WR +G+NSM
Sbjct:   310 VKQAA--ARSIKRVASVKPFGACFSTKNVGVTRLGYAVPEIELVLHSKDVVWRIFGANSM 367

Query:   328 VKVNEEVVCLGFLDGGSDLTSSIVLGGFQLEDNVMDFDLGTSMLGFS-TLRG--TCCSDF 384
             V V+++V+CLGF+DGG +  +S+V+GGFQLEDN+++FDL ++  GFS TL G  T C++F
Sbjct:   368 VSVSDDVICLGFVDGGVNARTSVVIGGFQLEDNLIEFDLASNKFGFSSTLLGRQTNCANF 427

Query:   385 S 385
             +
Sbjct:   428 N 428
GO:0004190 "aspartic-type endopeptidase activity" evidence=IEA
GO:0005576 "extracellular region" evidence=ISM
GO:0006508 "proteolysis" evidence=IEA
GO:0005618 "cell wall" evidence=IDA
GO:0005886 "plasma membrane" evidence=IDA
GO:0016020 "membrane" evidence=IDA
GO:0009505 "plant-type cell wall" evidence=IDA
GO:0009651 "response to salt stress" evidence=IEP
GO:0005829 "cytosol" evidence=RCA
GO:0009506 "plasmodesma" evidence=IDA
GO:0005794 "Golgi apparatus" evidence=IDA
TAIR|locus:2182187 AT5G19120 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2014465 AT1G03230 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2182182 AT5G19110 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2179614 AT5G19100 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2166061 AT5G48430 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2087790 NANA "NANA" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2145954 CDR1 "CONSTITUTIVE DISEASE RESISTANCE 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2183730 AT5G10770 "AT5G10770" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2045615 AT2G42980 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.4.23LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query394
cd05489362 cd05489, xylanase_inhibitor_I_like, TAXI-I inhibit 1e-102
cd05476265 cd05476, pepsin_A_like_plant, Chroloplast Nucleoid 4e-20
cd05472299 cd05472, cnd41_like, Chloroplast Nucleoids DNA-bin 4e-19
cd05471283 cd05471, pepsin_like, Pepsin-like aspartic proteas 1e-14
PLN03146431 PLN03146, PLN03146, aspartyl protease family prote 2e-13
cd05475273 cd05475, nucellin_like, Nucellins, plant aspartic 2e-05
cd05470109 cd05470, pepsin_retropepsin_like, Cellular and ret 0.002
>gnl|CDD|133156 cd05489, xylanase_inhibitor_I_like, TAXI-I inhibits degradation of xylan in the cell wall Back     alignment and domain information 
 Score =  306 bits (786), Expect = e-102
 Identities = 140/358 (39%), Positives = 190/358 (53%), Gaps = 40/358 (11%)

Query: 52  NLVLDLGGPLTWVDCDSSADVSSSSSRRLIPSQSIQCSRSG-----KSPVPGNGSDTTTN 106
            LVLDL GPL W  CD+      SS+ + +P  S  CS +       +     G     N
Sbjct: 11  PLVLDLAGPLLWSTCDAGH----SSTYQTVPCSSSVCSLANRYHCPGTCGGAPGPGCGNN 66

Query: 107 TCGVFTQNGISGLVTTGDLAEDTIAVRS-ELEDPSITAVDQFLFSCAPTFLLQGLARGAR 165
           TC     N ++G   TGDL +D ++  + +  +P +  +  F+FSCAP+ LL+GL  GA+
Sbjct: 67  TCTAHPYNPVTGECATGDLTQDVLSANTTDGSNPLLVVIFNFVFSCAPSLLLKGLPPGAQ 126

Query: 166 GMLGLGRAPISLPSQLATGIGHQRKFFMCLSS---SNGV--------VLSHHTSTTKLPL 214
           G+ GLGR+P+SLP+QLA+  G  RKF +CL S     GV         L          L
Sbjct: 127 GVAGLGRSPLSLPAQLASAFGVARKFALCLPSSPGGPGVAIFGGGPYYLFPPPIDLSKSL 186

Query: 215 MYTPLI---GKSQDYFINVKSIKINGNPLSV---------TIEGLTKLSTIVPYATMESS 262
            YTPL+    KS +Y+I V SI +NG+ + +            G  KLST+VPY  + S 
Sbjct: 187 SYTPLLTNPRKSGEYYIGVTSIAVNGHAVPLNPTLSANDRLGPGGVKLSTVVPYTVLRSD 246

Query: 263 IYATFAKAFTKAAAAASRDMSVVAPVAPFSLCF-SSKGFN---GSAVPVIDFVLQSEMVK 318
           IY  F +AF KA A   R   V A      LC+ +S   N   G AVP ID VL    V 
Sbjct: 247 IYRAFTQAFAKATARIPR---VPAAAVFPELCYPASALGNTRLGYAVPAIDLVLDGGGVN 303

Query: 319 WRFYGSNSMVKVNEEVVCLGFLDGGSDLTSSIVLGGFQLEDNVMDFDLGTSMLGFSTL 376
           W  +G+NSMV+V   V CL F+DGGS+   ++V+GG Q+EDN++ FDL  S LGFS+ 
Sbjct: 304 WTIFGANSMVQVKGGVACLAFVDGGSEPRPAVVIGGHQMEDNLLVFDLEKSRLGFSSS 361

Xylanase inhibitor-I (TAXI-I) is a member of potent TAXI-type inhibitors of fungal and bacterial family 11 xylanases. Plants developed a diverse battery of defense mechanisms in response to continual challenges by a broad spectrum of pathogenic microorganisms. Their defense arsenal includes inhibitors of cell wall-degrading enzymes, which hinder a possible invasion and colonization by antagonists. Xylanases of fungal and bacterial pathogens are the key enzymes in the degradation of xylan in the cell wall. Plants secrete proteins that inhibit these degradation glycosidases, including xylanase. Surprisingly, TAXI-I displays structural homology with the pepsin-like family of aspartic proteases but is proteolytically nonfunctional, because one or more residues of the essential catalytic triad are absent. The structure of the TAXI-inhibitor, Aspergillus niger xylanase I complex, illustrates the ability of tight binding and inhibition with subnanomolar affinity and indicates the importance of the C-terminal end for the differences in xylanase specificity among different TAXI-type inhibitors. This family also contains pepsin-like aspartic proteinases homologous to TAXI-I. Unlike TAXI-I, they have active site aspartates and are functionally active. This family of aspartate proteases is classified by MEROPS as the peptidase family A1 (pepsin A, clan AA). Length = 362
>gnl|CDD|133143 cd05476, pepsin_A_like_plant, Chroloplast Nucleoids DNA-binding Protease and Nucellin, pepsin-like aspartic proteases from plants Back     alignment and domain information
>gnl|CDD|133139 cd05472, cnd41_like, Chloroplast Nucleoids DNA-binding Protease, catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase Back     alignment and domain information
>gnl|CDD|133138 cd05471, pepsin_like, Pepsin-like aspartic proteases, bilobal enzymes that cleave bonds in peptides at acidic pH Back     alignment and domain information
>gnl|CDD|178691 PLN03146, PLN03146, aspartyl protease family protein; Provisional Back     alignment and domain information
>gnl|CDD|133142 cd05475, nucellin_like, Nucellins, plant aspartic proteases specifically expressed in nucellar cells during degradation Back     alignment and domain information
>gnl|CDD|133137 cd05470, pepsin_retropepsin_like, Cellular and retroviral pepsin-like aspartate proteases Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 394
PLN03146431 aspartyl protease family protein; Provisional 100.0
cd05472299 cnd41_like Chloroplast Nucleoids DNA-binding Prote 100.0
cd05489362 xylanase_inhibitor_I_like TAXI-I inhibits degradat 100.0
KOG1339398 consensus Aspartyl protease [Posttranslational mod 100.0
cd06096326 Plasmepsin_5 Plasmepsins are a class of aspartic p 100.0
cd05478317 pepsin_A Pepsin A, aspartic protease produced in g 100.0
cd05490325 Cathepsin_D2 Cathepsin_D2, pepsin family of protei 100.0
cd05488320 Proteinase_A_fungi Fungal Proteinase A , aspartic 100.0
cd05486316 Cathespin_E Cathepsin E, non-lysosomal aspartic pr 100.0
PTZ00165482 aspartyl protease; Provisional 100.0
cd05475273 nucellin_like Nucellins, plant aspartic proteases 100.0
cd05477318 gastricsin Gastricsins, asparate proteases produce 100.0
cd06098317 phytepsin Phytepsin, a plant homolog of mammalian 100.0
cd05485329 Cathepsin_D_like Cathepsin_D_like, pepsin family o 100.0
PTZ00147453 plasmepsin-1; Provisional 100.0
cd05487326 renin_like Renin stimulates production of angioten 100.0
PTZ00013450 plasmepsin 4 (PM4); Provisional 100.0
cd05476265 pepsin_A_like_plant Chroloplast Nucleoids DNA-bind 100.0
cd05473364 beta_secretase_like Beta-secretase, aspartic-acid 100.0
cd05474295 SAP_like SAPs, pepsin-like proteinases secreted fr 100.0
cd06097278 Aspergillopepsin_like Aspergillopepsin_like, aspar 100.0
PF00026317 Asp: Eukaryotic aspartyl protease The Prosite entr 100.0
cd05471283 pepsin_like Pepsin-like aspartic proteases, biloba 100.0
PF14543164 TAXi_N: Xylanase inhibitor N-terminal; PDB: 3HD8_A 99.97
PF14541161 TAXi_C: Xylanase inhibitor C-terminal; PDB: 3AUP_D 99.93
cd05470109 pepsin_retropepsin_like Cellular and retroviral pe 99.82
cd0548396 retropepsin_like_bacteria Bacterial aspartate prot 98.0
TIGR02281121 clan_AA_DTGA clan AA aspartic protease, TIGR02281 97.29
PF1365090 Asp_protease_2: Aspartyl protease 96.43
cd05479124 RP_DDI RP_DDI; retropepsin-like domain of DNA dama 95.2
PF11925370 DUF3443: Protein of unknown function (DUF3443); In 94.76
cd05479124 RP_DDI RP_DDI; retropepsin-like domain of DNA dama 94.65
PF08284135 RVP_2: Retroviral aspartyl protease; InterPro: IPR 92.24
cd0548491 retropepsin_like_LTR_2 Retropepsins_like_LTR, peps 89.96
TIGR02281121 clan_AA_DTGA clan AA aspartic protease, TIGR02281 89.38
TIGR03698107 clan_AA_DTGF clan AA aspartic protease, AF_0612 fa 88.63
PF1365090 Asp_protease_2: Aspartyl protease 88.29
cd0548491 retropepsin_like_LTR_2 Retropepsins_like_LTR, peps 87.48
PF12384177 Peptidase_A2B: Ty3 transposon peptidase; InterPro: 86.6
cd0609586 RP_RTVL_H_like Retropepsin of the RTVL_H family of 86.51
PF1397572 gag-asp_proteas: gag-polyprotein putative aspartyl 85.76
PF1397572 gag-asp_proteas: gag-polyprotein putative aspartyl 84.43
cd0548396 retropepsin_like_bacteria Bacterial aspartate prot 83.74
cd0609586 RP_RTVL_H_like Retropepsin of the RTVL_H family of 83.43
COG3577215 Predicted aspartyl protease [General function pred 82.34
>PLN03146 aspartyl protease family protein; Provisional Back     alignment and domain information 
Probab=100.00  E-value=4.7e-58  Score=454.64  Aligned_cols=330  Identities=25%  Similarity=0.436  Sum_probs=267.6

Q ss_pred             eEEEeeeecCCCccEEEEEeeCCCCCeEEEEEEcCCCceeeeCCCC--CC--------CCCCCCCCCCCCCCcccCCCCC
Q 040581           24 SVAIPVVKDVSTLQYVAKIHHGVSQVPINLVLDLGGPLTWVDCDSS--AD--------VSSSSSRRLIPSQSIQCSRSGK   93 (394)
Q Consensus        24 ~~~~pl~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~c--~~--------p~~Sst~~~~~c~~~~C~~~~~   93 (394)
                      .+..++..  .+++|+++|.||||||++.|++||||+++||+|.+|  |+        |++|+||+.++|.++.|+....
T Consensus        73 ~~~~~~~~--~~~~Y~v~i~iGTPpq~~~vi~DTGS~l~Wv~C~~C~~C~~~~~~~fdps~SST~~~~~C~s~~C~~~~~  150 (431)
T PLN03146         73 DPQSDLIS--NGGEYLMNISIGTPPVPILAIADTGSDLIWTQCKPCDDCYKQVSPLFDPKKSSTYKDVSCDSSQCQALGN  150 (431)
T ss_pred             ccccCccc--CCccEEEEEEcCCCCceEEEEECCCCCcceEcCCCCcccccCCCCcccCCCCCCCcccCCCCcccccCCC
Confidence            34444443  568999999999999999999999999999999987  32        7899999999999999976432


Q ss_pred             CCCCCCCCCCCC-CCceeeEEeCCCCceEeeEEEEEEEEecccCCCCcceecccEEEecccCccccCCC-CCcceeeecC
Q 040581           94 SPVPGNGSDTTT-NTCGVFTQNGISGLVTTGDLAEDTIAVRSELEDPSITAVDQFLFSCAPTFLLQGLA-RGARGMLGLG  171 (394)
Q Consensus        94 ~~~~~~~~~~~~-~~~~~~~~Y~~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~fg~~~~~~~~~~~-~~~~GIlGLg  171 (394)
                        ...    |.. +.|.|.+.|+ ||+.+.|.+++|+|+|++...  +.++++++.|||++.+  .+.+ ...+||||||
T Consensus       151 --~~~----c~~~~~c~y~i~Yg-dgs~~~G~l~~Dtltlg~~~~--~~~~v~~~~FGc~~~~--~g~f~~~~~GilGLG  219 (431)
T PLN03146        151 --QAS----CSDENTCTYSYSYG-DGSFTKGNLAVETLTIGSTSG--RPVSFPGIVFGCGHNN--GGTFDEKGSGIVGLG  219 (431)
T ss_pred             --CCC----CCCCCCCeeEEEeC-CCCceeeEEEEEEEEeccCCC--CcceeCCEEEeCCCCC--CCCccCCCceeEecC
Confidence              111    543 4699999998 888899999999999987532  1236889999999987  3322 3589999999


Q ss_pred             CCCCchhhhhhcccCCcceEEEeecCC------CCeEEEcCCCCCCC-CceEEecccC--CCceEEEEeEEEEcCEEEEE
Q 040581          172 RAPISLPSQLATGIGHQRKFFMCLSSS------NGVVLSHHTSTTKL-PLMYTPLIGK--SQDYFINVKSIKINGNPLSV  242 (394)
Q Consensus       172 ~~~~s~~~ql~~~~~i~~~Fs~~L~~~------~G~l~fGg~~~~~g-~~~~tpl~~~--~~~y~v~l~~i~v~~~~~~~  242 (394)
                      +...|+++|+...  +.++||+||.+.      .|.|+||+.+++.+ .+.||||+.+  +.+|.|+|++|+||++.+.+
T Consensus       220 ~~~~Sl~sql~~~--~~~~FSycL~~~~~~~~~~g~l~fG~~~~~~~~~~~~tPl~~~~~~~~y~V~L~gIsVgg~~l~~  297 (431)
T PLN03146        220 GGPLSLISQLGSS--IGGKFSYCLVPLSSDSNGTSKINFGTNAIVSGSGVVSTPLVSKDPDTFYYLTLEAISVGSKKLPY  297 (431)
T ss_pred             CCCccHHHHhhHh--hCCcEEEECCCCCCCCCCcceEEeCCccccCCCCceEcccccCCCCCeEEEeEEEEEECCEECcC
Confidence            9999999999764  336999999641      79999999766544 5899999853  27999999999999998765


Q ss_pred             e---c----CCceEEeccCceeeechHHHHHHHHHHHHHHHhcccCceecCCCCCCCceecccCCCCCCCCeEEEEEcCc
Q 040581          243 T---I----EGLTKLSTIVPYATMESSIYATFAKAFTKAAAAASRDMSVVAPVAPFSLCFSSKGFNGSAVPVIDFVLQSE  315 (394)
Q Consensus       243 ~---~----~~~~iiDTGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~  315 (394)
                      +   +    .+++||||||++++||+++|++++++|.+.+..    .........+..||+...  ...+|+|+|+|+| 
T Consensus       298 ~~~~~~~~~~g~~iiDSGTt~t~Lp~~~y~~l~~~~~~~~~~----~~~~~~~~~~~~C~~~~~--~~~~P~i~~~F~G-  370 (431)
T PLN03146        298 TGSSKNGVEEGNIIIDSGTTLTLLPSDFYSELESAVEEAIGG----ERVSDPQGLLSLCYSSTS--DIKLPIITAHFTG-  370 (431)
T ss_pred             CccccccCCCCcEEEeCCccceecCHHHHHHHHHHHHHHhcc----ccCCCCCCCCCccccCCC--CCCCCeEEEEECC-
Confidence            4   1    247999999999999999999999999988752    111122334678997543  2468999999997 


Q ss_pred             ceEEEEccCCeEEEeCCceEEEEEEeCCCCCCCeeEECccceeeeEEEEeCCCCeEEEEeCCCCCCCC
Q 040581          316 MVKWRFYGSNSMVKVNEEVVCLGFLDGGSDLTSSIVLGGFQLEDNVMDFDLGTSMLGFSTLRGTCCSD  383 (394)
Q Consensus       316 ~~~~~i~~~~y~~~~~~~~~C~~~~~~~~~~~~~~ilG~~flr~~yvvFD~~~~rIGfa~~~~~~C~~  383 (394)
                       ++++|+|++|++...++..|++++...    +.+|||+.|||++|+|||.+++|||||   +.+|++
T Consensus       371 -a~~~l~~~~~~~~~~~~~~Cl~~~~~~----~~~IlG~~~q~~~~vvyDl~~~~igFa---~~~C~~  430 (431)
T PLN03146        371 -ADVKLQPLNTFVKVSEDLVCFAMIPTS----SIAIFGNLAQMNFLVGYDLESKTVSFK---PTDCTK  430 (431)
T ss_pred             -CeeecCcceeEEEcCCCcEEEEEecCC----CceEECeeeEeeEEEEEECCCCEEeee---cCCcCc
Confidence             899999999999877677899987542    258999999999999999999999999   889976

>cd05472 cnd41_like Chloroplast Nucleoids DNA-binding Protease, catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase Back     alignment and domain information
>cd05489 xylanase_inhibitor_I_like TAXI-I inhibits degradation of xylan in the cell wall Back     alignment and domain information
>KOG1339 consensus Aspartyl protease [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd06096 Plasmepsin_5 Plasmepsins are a class of aspartic proteinases produced by the plasmodium parasite Back     alignment and domain information
>cd05478 pepsin_A Pepsin A, aspartic protease produced in gastric mucosa of mammals Back     alignment and domain information
>cd05490 Cathepsin_D2 Cathepsin_D2, pepsin family of proteinases Back     alignment and domain information
>cd05488 Proteinase_A_fungi Fungal Proteinase A , aspartic proteinase superfamily Back     alignment and domain information
>cd05486 Cathespin_E Cathepsin E, non-lysosomal aspartic protease Back     alignment and domain information
>PTZ00165 aspartyl protease; Provisional Back     alignment and domain information
>cd05475 nucellin_like Nucellins, plant aspartic proteases specifically expressed in nucellar cells during degradation Back     alignment and domain information
>cd05477 gastricsin Gastricsins, asparate proteases produced in gastric mucosa Back     alignment and domain information
>cd06098 phytepsin Phytepsin, a plant homolog of mammalian lysosomal pepsins Back     alignment and domain information
>cd05485 Cathepsin_D_like Cathepsin_D_like, pepsin family of proteinases Back     alignment and domain information
>PTZ00147 plasmepsin-1; Provisional Back     alignment and domain information
>cd05487 renin_like Renin stimulates production of angiotensin and thus affects blood pressure Back     alignment and domain information
>PTZ00013 plasmepsin 4 (PM4); Provisional Back     alignment and domain information
>cd05476 pepsin_A_like_plant Chroloplast Nucleoids DNA-binding Protease and Nucellin, pepsin-like aspartic proteases from plants Back     alignment and domain information
>cd05473 beta_secretase_like Beta-secretase, aspartic-acid protease important in the pathogenesis of Alzheimer's disease Back     alignment and domain information
>cd05474 SAP_like SAPs, pepsin-like proteinases secreted from pathogens to degrade host proteins Back     alignment and domain information
>cd06097 Aspergillopepsin_like Aspergillopepsin_like, aspartic proteases of fungal origin Back     alignment and domain information
>PF00026 Asp: Eukaryotic aspartyl protease The Prosite entry also includes Pfam:PF00077 Back     alignment and domain information
>cd05471 pepsin_like Pepsin-like aspartic proteases, bilobal enzymes that cleave bonds in peptides at acidic pH Back     alignment and domain information
>PF14543 TAXi_N: Xylanase inhibitor N-terminal; PDB: 3HD8_A 3VLB_A 3VLA_A 3AUP_D 1T6G_A 1T6E_X 2B42_A Back     alignment and domain information
>PF14541 TAXi_C: Xylanase inhibitor C-terminal; PDB: 3AUP_D 3HD8_A 1T6G_A 1T6E_X 2B42_A 3VLB_A 3VLA_A Back     alignment and domain information
>cd05470 pepsin_retropepsin_like Cellular and retroviral pepsin-like aspartate proteases Back     alignment and domain information
>cd05483 retropepsin_like_bacteria Bacterial aspartate proteases, retropepsin-like protease family Back     alignment and domain information
>TIGR02281 clan_AA_DTGA clan AA aspartic protease, TIGR02281 family Back     alignment and domain information
>PF13650 Asp_protease_2: Aspartyl protease Back     alignment and domain information
>cd05479 RP_DDI RP_DDI; retropepsin-like domain of DNA damage inducible protein Back     alignment and domain information
>PF11925 DUF3443: Protein of unknown function (DUF3443); InterPro: IPR021847 This family of proteins are functionally uncharacterised Back     alignment and domain information
>cd05479 RP_DDI RP_DDI; retropepsin-like domain of DNA damage inducible protein Back     alignment and domain information
>PF08284 RVP_2: Retroviral aspartyl protease; InterPro: IPR013242 This region defines single domain aspartyl proteases from retroviruses, retrotransposons, and badnaviruses (plant dsDNA viruses) Back     alignment and domain information
>cd05484 retropepsin_like_LTR_2 Retropepsins_like_LTR, pepsin-like aspartate proteases Back     alignment and domain information
>TIGR02281 clan_AA_DTGA clan AA aspartic protease, TIGR02281 family Back     alignment and domain information
>TIGR03698 clan_AA_DTGF clan AA aspartic protease, AF_0612 family Back     alignment and domain information
>PF13650 Asp_protease_2: Aspartyl protease Back     alignment and domain information
>cd05484 retropepsin_like_LTR_2 Retropepsins_like_LTR, pepsin-like aspartate proteases Back     alignment and domain information
>PF12384 Peptidase_A2B: Ty3 transposon peptidase; InterPro: IPR024650 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>cd06095 RP_RTVL_H_like Retropepsin of the RTVL_H family of human endogenous retrovirus-like elements Back     alignment and domain information
>PF13975 gag-asp_proteas: gag-polyprotein putative aspartyl protease Back     alignment and domain information
>PF13975 gag-asp_proteas: gag-polyprotein putative aspartyl protease Back     alignment and domain information
>cd05483 retropepsin_like_bacteria Bacterial aspartate proteases, retropepsin-like protease family Back     alignment and domain information
>cd06095 RP_RTVL_H_like Retropepsin of the RTVL_H family of human endogenous retrovirus-like elements Back     alignment and domain information
>COG3577 Predicted aspartyl protease [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query394
3vlb_A413 Crystal Structure Of Xeg-Edgp Length = 413 5e-64
3vla_A413 Crystal Structure Of Edgp Length = 413 5e-64
3aup_A403 Crystal Structure Of Basic 7s Globulin From Soybean 9e-36
3hd8_A389 Crystal Structure Of The Triticum Aestivum Xylanase 2e-28
1t6e_X381 Crystal Structure Of The Triticum Aestivum Xylanase 9e-28
2b42_A381 Crystal Structure Of The Triticum Xylanse Inhibitor 9e-24
>pdb|3VLB|A Chain A, Crystal Structure Of Xeg-Edgp Length = 413 Back     alignment and structure 
Iteration: 1

 Score =  241 bits (615), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 169/412 (41%), Positives = 214/412 (51%), Gaps = 59/412 (14%)
Query: 24  SVAIPVVKDVSTLQYVAKIHHGVSQVPINLVLDLGGPLTWVDCDXXXXXXXXXXXXXXXX 83
           ++ +PV KD STLQYV  I+     V  NLV+DLGG   WVDCD                
Sbjct: 8   ALVVPVKKDASTLQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQNYVSSTYRPVRCRTS 67
Query: 84  XXIQCSRSG--------KSPVPGNGSDTTTNTCGVFTQNGISGLVTTGDLAEDTIAVRSE 135
              QCS SG          P PG       NTCGVF +N +    T G++AED ++V S 
Sbjct: 68  ---QCSLSGSIACGDCFNGPRPG----CNNNTCGVFPENPVINTATGGEVAEDVVSVEST 120
Query: 136 LEDPS--ITAVDQFLFSCAPTFXXXXXXXXXXXXXXXXXXPISLPSQLATGIGHQRKFFM 193
               S  +  V +F+FSCAPT                    I+LPSQ A+    +RKF M
Sbjct: 121 DGSSSGRVVTVPRFIFSCAPTSLLQNLASGVVGMAGLGRTRIALPSQFASAFSFKRKFAM 180
Query: 194 CLS---SSNGVVLSHHTSTTKLP--------LMYTPLIGK-------------SQDYFIN 229
           CLS   SSN V++  +   T LP        L YTPL+               S +YFI 
Sbjct: 181 CLSGSTSSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQGEPSVEYFIG 240
Query: 230 VKSIKINGNP-------LSVTIEGL--TKLSTIVPYATMESSIYXXXXXXXXXXXXXXSR 280
           VKSIKIN          LS++  GL  TK+STI PY  +E+SIY              +R
Sbjct: 241 VKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESA--AR 298
Query: 281 DMSVVAPVAPFSLCFSSKGFN----GSAVPVIDFVLQSEMVKWRFYGSNSMVKVNEEVVC 336
           +++ VA VAPF  CFS+        G +VP ID VLQSE V W   GSNSMV +N+ VVC
Sbjct: 299 NITRVASVAPFGACFSTDNILSTRLGPSVPSIDLVLQSESVVWTITGSNSMVYINDNVVC 358
Query: 337 LGFLDGGSDLTSSIVLGGFQLEDNVMDFDLGTSMLGFS-TLRG--TCCSDFS 385
           LG +DGGS+L +SIV+GG QLEDN++ FDL TS +GFS TL G  T C++F+
Sbjct: 359 LGVVDGGSNLRTSIVIGGHQLEDNLVQFDLATSRVGFSGTLLGSRTTCANFN 410
>pdb|3VLA|A Chain A, Crystal Structure Of Edgp Length = 413 Back     alignment and structure
>pdb|3AUP|A Chain A, Crystal Structure Of Basic 7s Globulin From Soybean Length = 403 Back     alignment and structure
>pdb|3HD8|A Chain A, Crystal Structure Of The Triticum Aestivum Xylanase Inhibitor-Iia In Complex With Bacillus Subtilis Xylanase Length = 389 Back     alignment and structure
>pdb|1T6E|X Chain X, Crystal Structure Of The Triticum Aestivum Xylanase Inhibitor I Length = 381 Back     alignment and structure
>pdb|2B42|A Chain A, Crystal Structure Of The Triticum Xylanse Inhibitor-I In Complex With Bacillus Subtilis Xylanase Length = 381 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query394
3vla_A413 EDGP; extracellular, inhibitor, plant protein; HET 2e-64
3aup_A403 SBG7S, BG, basic 7S globulin; pepsin-like fold, pl 7e-64
1t6e_X381 Xylanase inhibitor; two beta-barrel domain structu 1e-63
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A Length = 413 Back     alignment and structure
 Score =  210 bits (535), Expect = 2e-64
 Identities = 175/414 (42%), Positives = 228/414 (55%), Gaps = 51/414 (12%)

Query: 21  SVNSVAIPVVKDVSTLQYVAKIHHGVSQVPINLVLDLGGPLTWVDCDSSADVSSSSSRRL 80
             +++ +PV KD STLQYV  I+     V  NLV+DLGG   WVDCD +     SS+ R 
Sbjct: 5   RPSALVVPVKKDASTLQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQN---YVSSTYRP 61

Query: 81  IPSQSIQCSRSGK----SPVPGNGSDTTTNTCGVFTQNGISGLVTTGDLAEDTIAVRSEL 136
           +  ++ QCS SG         G       NTCGVF +N +    T G++AED ++V S  
Sbjct: 62  VRCRTSQCSLSGSIACGDCFNGPRPGCNNNTCGVFPENPVINTATGGEVAEDVVSVESTD 121

Query: 137 EDPSIT--AVDQFLFSCAPTFLLQGLARGARGMLGLGRAPISLPSQLATGIGHQRKFFMC 194
              S     V +F+FSCAPT LLQ LA G  GM GLGR  I+LPSQ A+    +RKF MC
Sbjct: 122 GSSSGRVVTVPRFIFSCAPTSLLQNLASGVVGMAGLGRTRIALPSQFASAFSFKRKFAMC 181

Query: 195 LSS-----------SNGVVLSHHTSTTKLPLMYTPLI-------------GKSQDYFINV 230
           LS            ++      +   +   L YTPL+               S +YFI V
Sbjct: 182 LSGSTSSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQGEPSVEYFIGV 241

Query: 231 KSIKINGNPLSV---------TIEGLTKLSTIVPYATMESSIYATFAKAFTKAAAAASRD 281
           KSIKIN   +++            G TK+STI PY  +E+SIY    +AF K +AA  R+
Sbjct: 242 KSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESAA--RN 299

Query: 282 MSVVAPVAPFSLCFSSKGFN----GSAVPVIDFVLQSEMVKWRFYGSNSMVKVNEEVVCL 337
           ++ VA VAPF  CFS+        G +VP ID VLQSE V W   GSNSMV +N+ VVCL
Sbjct: 300 ITRVASVAPFGACFSTDNILSTRLGPSVPSIDLVLQSESVVWTITGSNSMVYINDNVVCL 359

Query: 338 GFLDGGSDLTSSIVLGGFQLEDNVMDFDLGTSMLGFST---LRGTCCSDFSPNS 388
           G +DGGS+L +SIV+GG QLEDN++ FDL TS +GFS       T C++F+  S
Sbjct: 360 GVVDGGSNLRTSIVIGGHQLEDNLVQFDLATSRVGFSGTLLGSRTTCANFNFTS 413
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max} Length = 403 Back     alignment and structure
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A Length = 381 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query394
3vla_A413 EDGP; extracellular, inhibitor, plant protein; HET 100.0
3aup_A403 SBG7S, BG, basic 7S globulin; pepsin-like fold, pl 100.0
1t6e_X381 Xylanase inhibitor; two beta-barrel domain structu 100.0
1dpj_A329 Proteinase A; proteinase A, hydrolase-hydrolase in 100.0
1j71_A334 Candidapepsin, aspartic proteinase; candida tropic 100.0
2apr_A325 Rhizopuspepsin; hydrolase (aspartic proteinase); 1 100.0
3psg_A370 Pepsinogen; hydrolase(acid proteinase zymogen); 1. 100.0
2x0b_A383 Renin; hydrolase-hormone complex, hydrolase hormon 100.0
1tzs_A351 Cathepsin E; hydrolase, aspartic protease, activat 100.0
3cms_A323 Chymosin B; hydrolase, acid proteinase; 2.00A {Bos 100.0
1mpp_A361 Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomu 100.0
2qzx_A342 Candidapepsin-5; aspartic proteinase, aspartyl pro 100.0
1am5_A324 Pepsin, acid proteinase; aspartyl protease, hydrol 100.0
4aa9_A320 Chymosin; hydrolase, aspartic peptidase, rennet; H 100.0
3fv3_A339 SAPP1P-secreted aspartic protease 1; secreted aspa 100.0
3c9x_A329 Trichoderma reesei aspartic protease; aspartic pro 100.0
3k1w_A341 Renin; protease, alternative splicing, aspartyl pr 100.0
1oew_A329 Endothiapepsin; hydrolase, aspartic proteinase mec 100.0
3pvk_A342 Candidapepsin-2; hydrolase; 1.27A {Candida albican 100.0
1htr_B329 Gastricsin; aspartyl protease; 1.62A {Homo sapiens 100.0
1miq_A375 Plasmepsin; aspartic proteinase zymogen, domain op 100.0
1yg9_A330 Aspartic protease BLA G 2; allegren, hydrolase, al 100.0
1wkr_A340 Polyporopepsin; hydrolase, hydrolase-hydrolase inh 100.0
1ibq_A325 Aspergillopepsin; aspartic proteinase, hydrolase; 100.0
3qvc_A451 Histo-aspartic protease; HAP, plasmepsin, zymogen, 100.0
2bju_A453 Plasmepsin II; aspartic proteinase, drug design, m 100.0
1izd_A323 Aspartic proteinase; sugar binding, acid protease, 100.0
1qdm_A478 Prophytepsin; aspartic proteinases, saposin-like d 100.0
2ewy_A383 Beta-secretase 2; BACE2, aspartic protease, hydrol 100.0
1bxo_A323 Protein (penicillopepsin); hydrolase, phosphonate 100.0
3vf3_A402 Beta-secretase 1; structure-based drug design, hyd 100.0
2qp8_A395 Beta-secretase 1; BACE1, protease, alternative spl 100.0
3lpj_A455 Beta-secretase 1; alzheimer'S, aspartyl protease, 100.0
1b5f_A239 Protein (cardosin A); hydrolase, aspartic proteina 100.0
1lya_B241 Cathepsin D; lysosomal aspartic protease; HET: NAG 100.0
1lya_A97 Cathepsin D; lysosomal aspartic protease; HET: NAG 99.8
1b5f_B87 Protein (cardosin A); hydrolase, aspartic proteina 99.59
2i1a_A148 DNA damage-inducible protein DDI1; acid protease f 94.31
3s8i_A148 Protein DDI1 homolog 1; protease, structural genom 91.45
3s8i_A148 Protein DDI1 homolog 1; protease, structural genom 87.9
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A Back     alignment and structure
Probab=100.00  E-value=6.5e-68  Score=523.05  Aligned_cols=364  Identities=48%  Similarity=0.783  Sum_probs=303.0

Q ss_pred             cCCCeEEEeeeecCCCccEEEEEeeCCCCCeEEEEEEcCCCceeeeCCCCCCCCCCCCCCCCCCCCcccCCCCCCCCC--
Q 040581           20 ASVNSVAIPVVKDVSTLQYVAKIHHGVSQVPINLVLDLGGPLTWVDCDSSADVSSSSSRRLIPSQSIQCSRSGKSPVP--   97 (394)
Q Consensus        20 ~~~~~~~~pl~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~c~~p~~Sst~~~~~c~~~~C~~~~~~~~~--   97 (394)
                      .+++++.+||++|..+++|+++|.||||||++.|+|||||+++||+|.+|   .+|+||+.++|.++.|..+.+....  
T Consensus         4 ~~~~~~~~pv~~d~~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~~c---~~Sst~~~v~C~s~~C~~~~~~~~~~c   80 (413)
T 3vla_A            4 FRPSALVVPVKKDASTLQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQN---YVSSTYRPVRCRTSQCSLSGSIACGDC   80 (413)
T ss_dssp             CCCSEEEEEEEECTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSS---CCCTTCEECBTTSHHHHHTTCCEEECC
T ss_pred             CCCccEEEEeeecCCCCeEEEEEEcCCCCcceEEEEeCCChhhhcccCCC---CCCCCcCccCCCcccccccccCCCccc
Confidence            46889999999999999999999999999999999999999999999986   4899999999999999876531100  


Q ss_pred             --CCCCCCCCCCceeeEEeCCCCceEeeEEEEEEEEecccCCC-C-cceecccEEEecccCccccCCCCCcceeeecCCC
Q 040581           98 --GNGSDTTTNTCGVFTQNGISGLVTTGDLAEDTIAVRSELED-P-SITAVDQFLFSCAPTFLLQGLARGARGMLGLGRA  173 (394)
Q Consensus        98 --~~~~~~~~~~~~~~~~Y~~~g~~~~G~~~~D~v~i~~~~~~-~-~~~~~~~~~fg~~~~~~~~~~~~~~~GIlGLg~~  173 (394)
                        ..+..|.++.|.|.+.|+.+++.++|++++|+|+|+..++. + ..+.++++.|||++.+..++.+..+|||||||++
T Consensus        81 ~s~~~~~c~~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~g~~~~~dGIlGLg~~  160 (413)
T 3vla_A           81 FNGPRPGCNNNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQNLASGVVGMAGLGRT  160 (413)
T ss_dssp             SSCCBTTBCSSEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGTTSCTTCCEEEECSSS
T ss_pred             ccCCCCCCCCCcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCEEEECcccccccCcccccccccccCCC
Confidence              00123777789999999437899999999999999854322 1 2357889999999986434455678999999999


Q ss_pred             CCchhhhhhcccCCcceEEEeecCC---CCeEEEcCCCC-------CCCC-ceEEecccCC-------------CceEEE
Q 040581          174 PISLPSQLATGIGHQRKFFMCLSSS---NGVVLSHHTST-------TKLP-LMYTPLIGKS-------------QDYFIN  229 (394)
Q Consensus       174 ~~s~~~ql~~~~~i~~~Fs~~L~~~---~G~l~fGg~~~-------~~g~-~~~tpl~~~~-------------~~y~v~  229 (394)
                      +.|++.||..++.++++||+||.+.   +|+|+|||.+.       +.++ +.||||+.++             .+|.|+
T Consensus       161 ~lSl~sql~~~~~i~~~FS~cL~~~~~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~~~~~~~~~~~~~~~y~V~  240 (413)
T 3vla_A          161 RIALPSQFASAFSFKRKFAMCLSGSTSSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQGEPSVEYFIG  240 (413)
T ss_dssp             SSSHHHHHHHHHTCCSEEEEECCSCSSSCEEEEEESCCEEETTTEEECTTTSEEEECBCCSSCCSSSCCTTCCCCSCEEC
T ss_pred             CcchHHHHhhhcCCCceEEEeCCCCCCCceEEEECCCcccccccccccCCceeEeecccCCccccccccccCCCceEEEE
Confidence            9999999999888889999999984   89999999864       4677 9999998763             589999


Q ss_pred             EeEEEEcCEEEEEe---c------CCceEEeccCceeeechHHHHHHHHHHHHHHHhcccCceecCCCCCCCceecccCC
Q 040581          230 VKSIKINGNPLSVT---I------EGLTKLSTIVPYATMESSIYATFAKAFTKAAAAASRDMSVVAPVAPFSLCFSSKGF  300 (394)
Q Consensus       230 l~~i~v~~~~~~~~---~------~~~~iiDTGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~C~~~~~~  300 (394)
                      |++|+||++.+.++   +      .+++||||||++++||+++|++|+++|.+....  +++++.+....+..|++.+..
T Consensus       241 l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~~~~--~~~~~~~~~~~~~~C~~~~~~  318 (413)
T 3vla_A          241 VKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESAA--RNITRVASVAPFGACFSTDNI  318 (413)
T ss_dssp             CCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHHHHH--TTCCEECCCTTCSCEEECTTC
T ss_pred             EEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHHhcc--cCCCcCCCCCCCcceeccCCc
Confidence            99999999998764   1      257999999999999999999999999988752  235554444557899987643


Q ss_pred             C----CCCCCeEEEEEcCcceEEEEccCCeEEEeCCceEEEEEEeCCCCCCCeeEECccceeeeEEEEeCCCCeEEEEe-
Q 040581          301 N----GSAVPVIDFVLQSEMVKWRFYGSNSMVKVNEEVVCLGFLDGGSDLTSSIVLGGFQLEDNVMDFDLGTSMLGFST-  375 (394)
Q Consensus       301 ~----~~~~P~i~f~f~g~~~~~~i~~~~y~~~~~~~~~C~~~~~~~~~~~~~~ilG~~flr~~yvvFD~~~~rIGfa~-  375 (394)
                      .    +..+|+|+|+|+|++++|+|++++|+++..++..|++++.......+.||||+.|||++|+|||++++|||||+ 
T Consensus       319 ~~~~~~~~lP~i~f~f~g~~~~~~l~~~~y~~~~~~~~~Cl~~~~~~~~~~~~~IlGd~fl~~~~vvfD~~~~riGfa~~  398 (413)
T 3vla_A          319 LSTRLGPSVPSIDLVLQSESVVWTITGSNSMVYINDNVVCLGVVDGGSNLRTSIVIGGHQLEDNLVQFDLATSRVGFSGT  398 (413)
T ss_dssp             CEETTEECCCCEEEECSSTTCEEEECHHHHEEEEETTEEEECEEEEESSCSSSEEECHHHHTTEEEEEETTTTEEEEEEE
T ss_pred             cccccccCCCcEEEEEcCCcEEEEeCccceEEEeCCCcEEEEEEecCCCcccceeEehhhhcCeEEEEECCCCEEEEEEe
Confidence            2    13699999999975589999999999987667799998876432235799999999999999999999999999 


Q ss_pred             --CCCCCCCCCCCCc
Q 040581          376 --LRGTCCSDFSPNS  388 (394)
Q Consensus       376 --~~~~~C~~~~~~~  388 (394)
                        .+.+.|++|+|++
T Consensus       399 ~~~~~~~c~~~~~~~  413 (413)
T 3vla_A          399 LLGSRTTCANFNFTS  413 (413)
T ss_dssp             GGGGTCCGGGSBCCC
T ss_pred             cccCcccccCcCCCC
Confidence              6789999999864
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max} Back     alignment and structure
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A Back     alignment and structure
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A* Back     alignment and structure
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2 Back     alignment and structure
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A Back     alignment and structure
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A Back     alignment and structure
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens} Back     alignment and structure
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens} Back     alignment and structure
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A Back     alignment and structure
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A* Back     alignment and structure
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans} Back     alignment and structure
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2 Back     alignment and structure
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A Back     alignment and structure
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A* Back     alignment and structure
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A* Back     alignment and structure
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ... Back     alignment and structure
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ... Back     alignment and structure
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A* Back     alignment and structure
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A Back     alignment and structure
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A* Back     alignment and structure
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A* Back     alignment and structure
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2 Back     alignment and structure
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2 Back     alignment and structure
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A* Back     alignment and structure
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ... Back     alignment and structure
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A* Back     alignment and structure
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2 Back     alignment and structure
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens} Back     alignment and structure
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A Back     alignment and structure
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ... Back     alignment and structure
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ... Back     alignment and structure
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A* Back     alignment and structure
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Back     alignment and structure
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B* Back     alignment and structure
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A* Back     alignment and structure
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Back     alignment and structure
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae} Back     alignment and structure
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens} Back     alignment and structure
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 394
d1t6ex_381 b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Tr 9e-47
d1eaga_342 b.50.1.2 (A:) Acid protease {Yeast (Candida albica 2e-14
d1j71a_334 b.50.1.2 (A:) Acid protease {Yeast (Candida tropic 2e-10
g1lya.1338 b.50.1.2 (A:,B:) Cathepsin D {Human (Homo sapiens) 2e-10
d2qp8a1387 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Hum 2e-09
d3cmsa_323 b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos 3e-09
d1mppa_357 b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840] 4e-09
d3psga_370 b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxI 7e-09
d2apra_325 b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus 1e-08
d2bjua1329 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrad 4e-08
d1miqa_373 b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading e 4e-08
g1b5f.1326 b.50.1.2 (A:,B:) Plant acid proteinase, phytepsin 6e-08
g1htr.1372 b.50.1.2 (P:,B:) Pepsin(ogen) {Human (Homo sapiens 1e-07
d1dpja_329 b.50.1.2 (A:) Acid protease {Baker's yeast (Saccha 3e-07
d1hrna_337 b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Ho 5e-07
d1smra_335 b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mu 7e-07
d1qdma2337 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase 1e-06
d1am5a_324 b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus mo 1e-06
d1oewa_330 b.50.1.2 (A:) Endothiapepsin {Chestnut blight fung 3e-06
d1izea_323 b.50.1.2 (A:) Acid protease {Fungus (Aspergillus o 3e-06
d1bxoa_323 b.50.1.2 (A:) Acid protease {Fungus (Penicillium j 3e-06
d1wkra_340 b.50.1.2 (A:) Acid protease {Irpex lacteus (Polypo 3e-05
>d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]} Length = 381 Back     information, alignment and structure

class: All beta proteins
fold: Acid proteases
superfamily: Acid proteases
family: Pepsin-like
domain: Xylanase inhibitor TAXI-I
species: Wheat (Triticum aestivum) [TaxId: 4565]

 Score =  162 bits (409), Expect = 9e-47
 Identities = 117/391 (29%), Positives = 164/391 (41%), Gaps = 43/391 (10%)

Query: 25  VAIPVVKDVSTLQYVAKIHHGVSQVPINLVLDLGGPLTWVDCDSSADVSSSSSRRLIPSQ 84
           V  PV KD +T  Y    H G S     LVLD+ GPL W  CD     +       IP  
Sbjct: 3   VLAPVTKDPATSLYTIPFHDGAS-----LVLDVAGPLVWSTCDGGQPPAE------IPCS 51

Query: 85  SIQCSRSGKS-----PVPGNGSDTTTNTCGVFTQNGISGLVTTGDLAEDTIAVRSELEDP 139
           S  C  +        P P  GSD     C  +  N +SG    G L+       +     
Sbjct: 52  SPTCLLANAYPAPGCPAPSCGSDKHDKPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSK 111

Query: 140 SITAV-DQFLFSCAPTFLLQGLARGARGMLGLGRAPISLPSQLATGIGHQRKFFMCLSSS 198
            ++ V    L +CAP+ LL  L RG+ G+ GL  + ++LP+Q+A+      +F +CL + 
Sbjct: 112 PVSKVNVGVLAACAPSKLLASLPRGSTGVAGLANSGLALPAQVASAQKVANRFLLCLPTG 171

Query: 199 NGVVLS-----HHTSTTKLPLMYTPLI--GKSQDYFINVKSIKINGNPLSVTIE----GL 247
              V                + YTPL+  G S  ++I+ +SI +    + V       G 
Sbjct: 172 GPGVAIFGGGPVPWPQFTQSMPYTPLVTKGGSPAHYISARSIVVGDTRVPVPEGALATGG 231

Query: 248 TKLSTIVPYATMESSIYATFAKAFTKAAAAAS----RDMSVVAPVAPFSLCFSSKGFN-- 301
             LST +PY  +   +Y     AFTKA AA           V  VAPF +C+ +K     
Sbjct: 232 VMLSTRLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAVEAVAPFGVCYDTKTLGNN 291

Query: 302 --GSAVPVIDFVLQSEMVKWRFYGSNSMVKVNEEVVCLGFL-----DGGSDLTSSIVLGG 354
             G AVP +   L      W   G NSMV V +   C+ F+       G     +++LGG
Sbjct: 292 LGGYAVPNVQLGLDGG-SDWTMTGKNSMVDVKQGTACVAFVEMKGVAAGDGRAPAVILGG 350

Query: 355 FQLEDNVMDFDLGTSMLGF-STLRGTCCSDF 384
            Q+ED V+DFD+    LGF      T C   
Sbjct: 351 AQMEDFVLDFDMEKKRLGFSRLPHFTGCGGL 381
>d1eaga_ b.50.1.2 (A:) Acid protease {Yeast (Candida albicans) [TaxId: 5476]} Length = 342 Back     information, alignment and structure
>d1j71a_ b.50.1.2 (A:) Acid protease {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 334 Back     information, alignment and structure
>d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]} Length = 387 Back     information, alignment and structure
>d3cmsa_ b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId: 9913]} Length = 323 Back     information, alignment and structure
>d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]} Length = 357 Back     information, alignment and structure
>d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} Length = 370 Back     information, alignment and structure
>d2apra_ b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus chinensis) [TaxId: 4843]} Length = 325 Back     information, alignment and structure
>d2bjua1 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium falciparum, plasmepsin II [TaxId: 5833]} Length = 329 Back     information, alignment and structure
>d1miqa_ b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium vivax [TaxId: 5855]} Length = 373 Back     information, alignment and structure
>d1dpja_ b.50.1.2 (A:) Acid protease {Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]} Length = 329 Back     information, alignment and structure
>d1hrna_ b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 Back     information, alignment and structure
>d1smra_ b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mus musculus) [TaxId: 10090]} Length = 335 Back     information, alignment and structure
>d1qdma2 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase, phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]} Length = 337 Back     information, alignment and structure
>d1am5a_ b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 8049]} Length = 324 Back     information, alignment and structure
>d1izea_ b.50.1.2 (A:) Acid protease {Fungus (Aspergillus oryzae) [TaxId: 5062]} Length = 323 Back     information, alignment and structure
>d1bxoa_ b.50.1.2 (A:) Acid protease {Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]} Length = 323 Back     information, alignment and structure
>d1wkra_ b.50.1.2 (A:) Acid protease {Irpex lacteus (Polyporus tulipiferae), Polyporopepsin [TaxId: 5319]} Length = 340 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query394
d2apra_325 Acid protease {Bread mold (Rhizopus chinensis) [Ta 100.0
d1t6ex_381 Xylanase inhibitor TAXI-I {Wheat (Triticum aestivu 100.0
d1j71a_334 Acid protease {Yeast (Candida tropicalis) [TaxId: 100.0
d1dpja_329 Acid protease {Baker's yeast (Saccharomyces cerevi 100.0
d3psga_370 Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} 100.0
d1eaga_342 Acid protease {Yeast (Candida albicans) [TaxId: 54 100.0
g1htr.1372 Pepsin(ogen) {Human (Homo sapiens), progastricsin 100.0
d1oewa_330 Endothiapepsin {Chestnut blight fungus (Endothia p 100.0
d1smra_335 Chymosin (synonym: renin) {Mouse (Mus musculus) [T 100.0
d1am5a_324 Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 100.0
d1miqa_373 Plasmepsin (a hemoglobin-degrading enzyme) {Plasmo 100.0
d1mppa_357 Pepsin {Mucor pusillus [TaxId: 4840]} 100.0
d1hrna_337 Chymosin (synonym: renin) {Human (Homo sapiens) [T 100.0
d1izea_323 Acid protease {Fungus (Aspergillus oryzae) [TaxId: 100.0
d2qp8a1387 beta-secretase (memapsin) {Human (Homo sapiens) [T 100.0
d1wkra_340 Acid protease {Irpex lacteus (Polyporus tulipifera 100.0
d1bxoa_323 Acid protease {Fungus (Penicillium janthinellum), 100.0
g1lya.1338 Cathepsin D {Human (Homo sapiens) [TaxId: 9606]} 100.0
d3cmsa_323 Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId 100.0
d2bjua1329 Plasmepsin (a hemoglobin-degrading enzyme) {Plasmo 100.0
g1b5f.1326 Plant acid proteinase, phytepsin {Cynara carduncul 100.0
d1qdma2337 Plant acid proteinase, phytepsin {Barley (Hordeum 100.0
>d2apra_ b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus chinensis) [TaxId: 4843]} Back     information, alignment and structure
class: All beta proteins
fold: Acid proteases
superfamily: Acid proteases
family: Pepsin-like
domain: Acid protease
species: Bread mold (Rhizopus chinensis) [TaxId: 4843]

Probab=100.00  E-value=1.5e-52  Score=399.44  Aligned_cols=305  Identities=16%  Similarity=0.161  Sum_probs=241.0

Q ss_pred             EEEeeeecCCCccEEEEEeeCCCCCeEEEEEEcCCCceeeeCCCCCCCCCCCCCCCCCCCCcccCCCCCCCCCCCCCCCC
Q 040581           25 VAIPVVKDVSTLQYVAKIHHGVSQVPINLVLDLGGPLTWVDCDSSADVSSSSSRRLIPSQSIQCSRSGKSPVPGNGSDTT  104 (394)
Q Consensus        25 ~~~pl~~~~~~~~Y~~~i~iGtP~q~~~v~~DTGS~~~wv~~~~c~~p~~Sst~~~~~c~~~~C~~~~~~~~~~~~~~~~  104 (394)
                      -++||....++.+|+++|.||||||+++|++||||+++||+|..|.           .|     ......+++.+++++.
T Consensus         4 ~~vpl~~~~~d~~Y~~~i~iGtP~Q~~~v~vDTGS~~~Wv~~~~C~-----------~c-----~~~~~~y~~~~SsT~~   67 (325)
T d2apra_           4 GTVPMTDYGNDIEYYGQVTIGTPGKKFNLDFDTGSSDLWIASTLCT-----------NC-----GSGQTKYDPNQSSTYQ   67 (325)
T ss_dssp             TEEEEEEETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCS-----------SC-----CTTSCCBCGGGCTTCE
T ss_pred             eEEEeEecCCCcEEEEEEEEeCCCEEEEEEEECCCCcEEEeCCCCC-----------cc-----ccCCCccCcccCCcee
Confidence            3579987556789999999999999999999999999999999871           11     1111123344444466


Q ss_pred             CCCceeeEEeCCCCceEeeEEEEEEEEecccCCCCcceecccEEEecccCccccCCCCCcceeeecCCCC-------Cch
Q 040581          105 TNTCGVFTQNGISGLVTTGDLAEDTIAVRSELEDPSITAVDQFLFSCAPTFLLQGLARGARGMLGLGRAP-------ISL  177 (394)
Q Consensus       105 ~~~~~~~~~Y~~~g~~~~G~~~~D~v~i~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~~~~GIlGLg~~~-------~s~  177 (394)
                      ...|.+.+.|+ +|+.+.|.+++|++++++.       .++++.|+++............+||+|||...       .++
T Consensus        68 ~~~~~~~~~y~-~g~~~~G~~~~D~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~GilGlg~~~~~~~~~~~~~  139 (325)
T d2apra_          68 ADGRTWSISYG-DGSSASGILAKDNVNLGGL-------LIKGQTIELAKREAASFASGPNDGLLGLGFDTITTVRGVKTP  139 (325)
T ss_dssp             EEEEEEEEECT-TSCEEEEEEEEEEEEETTE-------EEEEEEEEEEEEECHHHHTSSCSEEEECSCGGGCSSTTCCCH
T ss_pred             ECCeEEEEEeC-CCCeEEEEEEeeeEEeeee-------eccCcceeeeeeecccccccccCcccccccccccccccCCcc
Confidence            67899999998 8889999999999999987       67788999888652222234689999999754       346


Q ss_pred             hhhhhcccCC-cceEEEeecCC----CCeEEEcCCCC--CCCCceEEecccCCCceEEEEeEEEEcCEEEEEecCCceEE
Q 040581          178 PSQLATGIGH-QRKFFMCLSSS----NGVVLSHHTST--TKLPLMYTPLIGKSQDYFINVKSIKINGNPLSVTIEGLTKL  250 (394)
Q Consensus       178 ~~ql~~~~~i-~~~Fs~~L~~~----~G~l~fGg~~~--~~g~~~~tpl~~~~~~y~v~l~~i~v~~~~~~~~~~~~~ii  250 (394)
                      +.++.+++.+ +++||+||.+.    .|.|+|||++.  +.+++.|+|+.....+|.|.+++|.++++.+..  ...++|
T Consensus       140 ~~~l~~~g~i~~~~fs~~l~~~~~~~~g~l~~Gg~d~~~~~~~~~~~~~~~~~~~~~v~l~~i~i~~~~~~~--~~~~ii  217 (325)
T d2apra_         140 MDNLISQGLISRPIFGVYLGKAKNGGGGEYIFGGYDSTKFKGSLTTVPIDNSRGWWGITVDRATVGTSTVAS--SFDGIL  217 (325)
T ss_dssp             HHHHHHTTSCSSSEEEEEECCGGGTCCEEEEETCCCGGGBCSCCEEEECBCTTSSCEEEECEEEETTEEEEC--CEEEEE
T ss_pred             hhHHHhhccccceeEEEEeccCCCCCCeEEEecCCCchhhccceeeEeecCCCceEEEEEeeEEECCEeecc--eeeeec
Confidence            7788888877 68899999765    79999999864  799999999987668999999999999998764  346999


Q ss_pred             eccCceeeechHHHHHHHHHHHHHHHhcccCceecCCCCCCCceecccCCCCCCCCeEEEEEcCcceEEEEccCCeEEEe
Q 040581          251 STIVPYATMESSIYATFAKAFTKAAAAASRDMSVVAPVAPFSLCFSSKGFNGSAVPVIDFVLQSEMVKWRFYGSNSMVKV  330 (394)
Q Consensus       251 DTGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~i~~~~y~~~~  330 (394)
                      ||||++++||+++|++|.+.+.+...        ... ....+|..      ..+|+|+|+|+|  .+++|+|++|+++.
T Consensus       218 DSGt~~~~lp~~~~~~l~~~~~~~~~--------~~~-~~~~~C~~------~~~p~i~f~f~g--~~~~i~~~~y~~~~  280 (325)
T d2apra_         218 DTGTTLLILPNNIAASVARAYGASDN--------GDG-TYTISCDT------SAFKPLVFSING--ASFQVSPDSLVFEE  280 (325)
T ss_dssp             CTTCSSEEEEHHHHHHHHHHHTCEEC--------SSS-CEEECSCG------GGCCCEEEEETT--EEEEECGGGGEEEE
T ss_pred             cCCCccccCCHHHHHHHHHHhCCccc--------CCC-ceeecccC------CCCCcEEEEECC--EEEEEChHHeEEec
Confidence            99999999999999999887643211        111 11124532      247999999987  99999999999987


Q ss_pred             CCceEEEEEEeCCCCCCCeeEECccceeeeEEEEeCCCCeEEEEe
Q 040581          331 NEEVVCLGFLDGGSDLTSSIVLGGFQLEDNVMDFDLGTSMLGFST  375 (394)
Q Consensus       331 ~~~~~C~~~~~~~~~~~~~~ilG~~flr~~yvvFD~~~~rIGfa~  375 (394)
                      .++.||+++.....   +.+|||++|||++|+|||+|++|||||+
T Consensus       281 ~~~~C~~~i~~~~~---~~~iLG~~flr~~y~vfD~~~~~IGfAp  322 (325)
T d2apra_         281 FQGQCIAGFGYGNW---GFAIIGDTFLKNNYVVFNQGVPEVQIAP  322 (325)
T ss_dssp             ETTEEEESEEEESS---SSEEECHHHHTTEEEEEETTTTEEEEEE
T ss_pred             CCCEEEEEEccCCC---CCEEECHHHhCcEEEEEECCCCEEeEEE
Confidence            66555556655432   4689999999999999999999999997
>d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]} Back     information, alignment and structure
>d1j71a_ b.50.1.2 (A:) Acid protease {Yeast (Candida tropicalis) [TaxId: 5482]} Back     information, alignment and structure
>d1dpja_ b.50.1.2 (A:) Acid protease {Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]} Back     information, alignment and structure
>d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1eaga_ b.50.1.2 (A:) Acid protease {Yeast (Candida albicans) [TaxId: 5476]} Back     information, alignment and structure
>d1smra_ b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1am5a_ b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 8049]} Back     information, alignment and structure
>d1miqa_ b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium vivax [TaxId: 5855]} Back     information, alignment and structure
>d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]} Back     information, alignment and structure
>d1hrna_ b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1izea_ b.50.1.2 (A:) Acid protease {Fungus (Aspergillus oryzae) [TaxId: 5062]} Back     information, alignment and structure
>d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1wkra_ b.50.1.2 (A:) Acid protease {Irpex lacteus (Polyporus tulipiferae), Polyporopepsin [TaxId: 5319]} Back     information, alignment and structure
>d1bxoa_ b.50.1.2 (A:) Acid protease {Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]} Back     information, alignment and structure
>d3cmsa_ b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d2bjua1 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium falciparum, plasmepsin II [TaxId: 5833]} Back     information, alignment and structure
>d1qdma2 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase, phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]} Back     information, alignment and structure