Citrus Sinensis ID: 040603

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170--
Protein Sequence
MGNHISCTLSKPLGKHTRSAKVIFPGGEIRQIQTPIKAAELMLEKPNFFLINSRSLKIGQRFSPLNADEDLEPKNVYVMFPMKRATSKITATDMATLFVLANKAVKRCSSGKVRNFPESESAGEEVAACTAPMPKLDDMEEFSQPEYVYRLSVSRSKKPLLETIEEETTYAR
Secondary Structure (PSIPRED)
cccccccccccccccccccEEEEcccccEEEEcccccHHHHHHHccccEEEccccccccccccccccccccccccEEEEEEcccccccccHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHcccccccccccccccccHHcccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccEEEEccccccccccccEEEEEccccEEEEccccHHHHHHHHcccEEEEEcccccccccccccccHHHcccccEEEEEEcHHccccccHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHccccccHHccHccccHHHHHHHHccccccccccHHcccccccc
Coil and Loop (DISEMBL)
mgnhisctlskplgkhtrsakvifpggeirqiQTPIKAAELMLEkpnfflinsrslkigqrfsplnadedlepknvyvmfpmkratskitaTDMATLFVLANKAVkrcssgkvrnfpesesageevaactapmpklddmeefsqpeyvyrlsvsrskkplLETIEEETTYAR
Flexible Loop (DISEMBL)
mgnhisctlskplgkhtrsakvifpggeirQIQTPIKAAELMLEKPNFFLINSRSLKIGQRFsplnadedlepkNVYVMFPMKRATSKITATDMATLFVLANKAVKRCSSGKvrnfpesesageevAACTAPMPKLDDMEEFSQPEYVyrlsvsrskkplletieeettyar
Low Complexity Region (SEG)
MGNHISCTLSKPLGKHTRSAKVIFPGGEIRQIQTPIKAAELMLEKPNFFLINSRSLKIGQRFSPLNADEDLEPKNVYVMFPMKRATSKITATDMATLFVLANKAVKRCSSGKVRNFPESESAGEEVAACTAPMPKLDDMEEFSQPEYVYRLSVSRSKKPLLETIEEETTYAR
Disordered region (IsUnstruct)
*******************AKVIFPGGEIRQIQTPIKAAELMLEKPNFFLINSRSLKIGQRFSPLNADEDLEPKNVYVMFPMKRATSKITATDMATLFVLANKAVKRC****************************************************************
Disordered Region (DISOPRED)
MGN****************AKVIFPGGEIRQIQTPIKAAELMLEKPNFFLINSRSLKIGQRFSPLNADEDLEPKNVYVMFPMKR******************************************************************************TIE*E*****
Disordered Region (DISEMBL)
MGNHISCTLSKPLGKHTRSAKVIFPGGEIRQIQTPIKAAELMLEKPNFFLINSRSLKIGQRFSPLNADEDLEPKNVYVMFPMKRATSKITATDMATLFVLANKAVKRCSSGKVR*************ACTAPMPKLDDMEEFSQPEYVYRLSVSRSKKPLLET*********
Disordered Region (DISPRO)
*GNHISCTLSKPLGKHTRSAKVIFPGGEIRQIQTPIKAAELMLEKPNFFLINSRSLKIGQRFSPLNADEDLEPKNVYVMFPMKRATSKITATDMATLFVLANKAVKRC**************************KLDDMEEFSQPEYVYRLSVSRSKKPLLE*IE*******
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MGNHISCTLSKPLGKHTRSAKVIFPGGEIRQIQTPIKAAELMLEKPNFFLINSRSLKIGQRFSPLNADEDLEPKNVYVMFPMKRATSKITATDMATLFVLANKAVKRCSSGKVRNFPESESAGEEVAACTAPMPKLDDMEEFSQPEYVYRLSVSRSKKPLLETIEEETTYAR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	172	2.2.26 [Sep-21-2011]
Q6NLC8	225	Uncharacterized protein A	no	no	0.494	0.377	0.308	3e-05

>sp|Q6NLC8|Y1648_ARATH Uncharacterized protein At1g66480 OS=Arabidopsis thaliana GN=At1g66480 PE=1 SV=1

 Score = 47.8 bits (112), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 9/94 (9%)

Query: 1  MGNHISCTLSKPLGKHTRSAKVIFPGGEIRQIQTPIKAAELMLEKPNFFLINSRSLK-IG 59
          MGN I+           + AKV+   GE  +I+TP+ A E+  + P + L++S+++K  G
Sbjct: 1  MGNSITV--------KRKRAKVMKIDGETFRIKTPVTAREVTADYPGYVLLDSQAVKHFG 52

Query: 60 QRFSPLNADEDLEPKNVYVMFPMKRATSKITATD 93
           R  PL  ++ L+PK  Y +  + +   + TA D
Sbjct: 53 VRSKPLEPNQTLKPKKTYFLVELPKLPPETTAVD 86

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	172
225424154	181	PREDICTED: uncharacterized protein LOC10	1.0	0.950	0.569	2e-49
224111558	178	predicted protein [Populus trichocarpa]	1.0	0.966	0.556	2e-46
255574278	174	conserved hypothetical protein [Ricinus	0.994	0.982	0.534	2e-45
224099449	179	predicted protein [Populus trichocarpa]	0.988	0.949	0.541	7e-45
225453068	177	PREDICTED: uncharacterized protein LOC10	0.953	0.926	0.524	4e-44
224065216	178	predicted protein [Populus trichocarpa]	1.0	0.966	0.533	6e-44
224079391	178	predicted protein [Populus trichocarpa]	0.970	0.938	0.537	5e-43
255574284	180	conserved hypothetical protein [Ricinus	1.0	0.955	0.511	1e-41
356513983	161	PREDICTED: uncharacterized protein LOC10	0.906	0.968	0.542	8e-41
449466290	174	PREDICTED: uncharacterized protein LOC10	0.976	0.965	0.5	1e-40

>gi|225424154|ref|XP_002284010.1| PREDICTED: uncharacterized protein LOC100262828 [Vitis vinifera]

 Score =  199 bits (507), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 103/181 (56%), Positives = 127/181 (70%), Gaps = 9/181 (4%)

Query: 1   MGNHISCTLSKPLGKHTRSAKVIFPGGEIRQIQTPIKAAELMLEKPNFFLINSRSLKIGQ 60
           MGN+ISCTL  P  K +++A+VIFP GE+RQ + P+KAAELMLE PNFFL+NS+SL +G+
Sbjct: 1   MGNYISCTLITPTIKSSKAARVIFPTGEVRQFREPLKAAELMLESPNFFLVNSKSLHMGR 60

Query: 61  RFSPLNADEDLEPKNVYVMFPMKRATSKITATDMATLFVLANKAVKRCSSGKVRNFPESE 120
           RF+PL ADEDLE  N+Y++FPMKR  S +TA DMA   + AN A KR S GKVR  PES 
Sbjct: 61  RFNPLTADEDLEFGNLYILFPMKRVNSVVTAADMAVYLLAANSAAKRISGGKVRILPESG 120

Query: 121 SAG-EEVAACTAPMP--------KLDDMEEFSQPEYVYRLSVSRSKKPLLETIEEETTYA 171
             G EEVA  TA +          LD++E F   EY YRL++ RSKKPLLETI EE   +
Sbjct: 121 GDGSEEVAVATAAVENEAGCSRLNLDEVEGFPVSEYKYRLAMFRSKKPLLETIREEPVCS 180

Query: 172 R 172
           R
Sbjct: 181 R 181

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224111558|ref|XP_002315899.1| predicted protein [Populus trichocarpa] gi|118487599|gb|ABK95625.1| unknown [Populus trichocarpa] gi|222864939|gb|EEF02070.1| predicted protein [Populus trichocarpa]

 Score =  190 bits (482), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 99/178 (55%), Positives = 125/178 (70%), Gaps = 6/178 (3%)

Query: 1   MGNHISCTLSKPLGKHTRSAKVIFPGGEIRQIQTPIKAAELMLEKPNFFLINSRSLKIGQ 60
           MGN+ISCTL+ PL KH++ A+V+FP GE+RQ + P+KAAELMLE PNFFL NS+SL IG+
Sbjct: 1   MGNYISCTLATPLMKHSKVARVVFPTGEVRQFREPVKAAELMLECPNFFLANSQSLHIGR 60

Query: 61  RFSPLNADEDLEPKNVYVMFPMKRATSKITATDMATLFVLANKAVKRCSSGKV-RNFPES 119
           RFS L+ADE+LE  NVY+MFPMKR +S +TA DMA  F+ AN A KR S G   R  PES
Sbjct: 61  RFSALSADEELESGNVYLMFPMKRVSSIVTAADMAVFFIAANSAAKRISGGNSNRVLPES 120

Query: 120 ---ESAGEEVAA--CTAPMPKLDDMEEFSQPEYVYRLSVSRSKKPLLETIEEETTYAR 172
              ++  E +      A    L+ +E+F  PEY YRLS  RS+KP+LETI+EE    R
Sbjct: 121 GGDQNVQESLEGRDNGAARLSLEGVEDFPAPEYKYRLSCCRSRKPMLETIKEEPVRLR 178

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255574278|ref|XP_002528053.1| conserved hypothetical protein [Ricinus communis] gi|223532514|gb|EEF34303.1| conserved hypothetical protein [Ricinus communis]

 Score =  186 bits (473), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 93/174 (53%), Positives = 126/174 (72%), Gaps = 3/174 (1%)

Query: 1   MGNHISCTLSKPLG-KHTRSA-KVIFPGGEIRQIQTPIKAAELMLEKPNFFLINSRSLKI 58
           MGN+ SC L+ PL  K+++S  KVIFP GEI+QI  P KAAELM+E PNFF+ NS+++KI
Sbjct: 1   MGNYASCKLANPLHIKNSKSTTKVIFPTGEIKQINQPTKAAELMMETPNFFITNSKTMKI 60

Query: 59  GQRFSPLNADEDLEPKNVYVMFPMKRATSKITATDMATLFVLANKAVKRCSSGKVRNFPE 118
           G+RF PLNAD+DL+   VY+MFPM +  S +TA+D+ +LF+ AN AVKR SSG+VR  P+
Sbjct: 61  GKRFCPLNADDDLQKGAVYIMFPMHKKNSFVTASDLGSLFMTANSAVKRVSSGRVRVLPD 120

Query: 119 SESAGEEVAACTAPMPKLDDMEEFSQPEYVYRLSVSRSKKPLLETIEEETTYAR 172
                ++      P   L+ MEE S PE+ +R+S+SRS+KPLLETI+EE   +R
Sbjct: 121 DTKLVDD-DEVVVPRLSLEGMEEVSMPEFRHRISMSRSRKPLLETIDEEPVRSR 173

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224099449|ref|XP_002311488.1| predicted protein [Populus trichocarpa] gi|222851308|gb|EEE88855.1| predicted protein [Populus trichocarpa]

 Score =  184 bits (468), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 98/181 (54%), Positives = 125/181 (69%), Gaps = 11/181 (6%)

Query: 1   MGNHISCTLSKPLGKHTRSAKVIFPGGEIRQIQTPIKAAELMLEKPNFFLINSRSLKIGQ 60
           MGN+ISCTL+ PL K +++A+V+FP GE+RQ + P+KAAELMLE PNFFL NS+SL IG+
Sbjct: 1   MGNYISCTLATPLIKSSKAARVVFPAGEVRQFREPVKAAELMLECPNFFLANSQSLHIGR 60

Query: 61  RFSPLNADEDLEPKNVYVMFPMKRATSKITATDMATLFVLANKAVKRCSSGK--VRNFPE 118
           RFS L+ADE+LE  NVY+MFPMKR  S +TA DMA  F+ AN A +R S G    R  P 
Sbjct: 61  RFSALSADEELEFGNVYLMFPMKRVFSTVTAADMAVFFMTANSAARRISGGNNITRVLP- 119

Query: 119 SESAGEEVAACT-------APMPKLDDMEEFSQPEYVYRLSVSRSKKPLLETIEEETTYA 171
            ES G++ A  +       A    L+++E F  PEY YRLS  RS+KP+LETI EE   +
Sbjct: 120 -ESGGDQNARESPKGSENGAARLSLEEVEGFPLPEYKYRLSSCRSRKPMLETINEEPVRS 178

Query: 172 R 172
           R
Sbjct: 179 R 179

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225453068|ref|XP_002268613.1| PREDICTED: uncharacterized protein LOC100258732 [Vitis vinifera]

 Score =  182 bits (462), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 97/185 (52%), Positives = 127/185 (68%), Gaps = 21/185 (11%)

Query: 1   MGNHISCTL-SKPLGKHTRSAKVIFPGGEIRQIQTPIKAAELMLEKPNFFLINSRSLKIG 59
           MGN++SC L +  +GK+ R+AKVIFPGGE+R +  P K AELMLE+P+FF++NS+SL +G
Sbjct: 1   MGNYVSCALATSSMGKY-RAAKVIFPGGEVRVLDRPTKVAELMLEEPSFFVVNSQSLHMG 59

Query: 60  QRFSPLNADEDLEPKNVYVMFPMKRATSKITATDMATLFVLANKAVKRCSSGKVRNFPES 119
           +RFS L ADEDLE  NVY MFPMKR  S +TA DM  LF+ AN +VK+ S+G++R   ES
Sbjct: 60  RRFSALGADEDLEMGNVYAMFPMKRLNSVVTAADMGALFMRANSSVKQASAGRMRLLAES 119

Query: 120 ------------ESAGEEVAACTAPMPKLDDMEEFSQPEYVYRLSVSRSKKPLLETIEEE 167
                       E+AGE           L+D+EE+S PE+ +RLS+ RSKKPLLETI EE
Sbjct: 120 GRGSQIMPSPAAENAGETRL-------NLEDIEEYSTPEFKHRLSMCRSKKPLLETIAEE 172

Query: 168 TTYAR 172
              +R
Sbjct: 173 PLCSR 177

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224065216|ref|XP_002301721.1| predicted protein [Populus trichocarpa] gi|222843447|gb|EEE80994.1| predicted protein [Populus trichocarpa]

 Score =  181 bits (460), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 95/178 (53%), Positives = 121/178 (67%), Gaps = 6/178 (3%)

Query: 1   MGNHISCTLSKPLG--KHTRSAKVIFPGGEIRQIQTPIKAAELMLEKPNFFLINSRSLKI 58
           MGN++SCTLS P G    ++S KVI P GEI++IQ P KAAELMLE PNFF++NS+SLKI
Sbjct: 1   MGNYVSCTLSNPQGLRNSSKSTKVILPTGEIKKIQQPTKAAELMLEAPNFFIVNSKSLKI 60

Query: 59  GQRFSPLNADEDLEPKNVYVMFPMKRATSKITATDMATLFVLANKAVKRCSSGKVRNFPE 118
           G RF PL AD +L   +VYVMFPM++  S +TA DM  LFV AN  +KR S G +R  P+
Sbjct: 61  GSRFCPLGADYELGKADVYVMFPMRKKNSVVTAGDMGALFVTANSVMKRASKGNMRVLPK 120

Query: 119 SE----SAGEEVAACTAPMPKLDDMEEFSQPEYVYRLSVSRSKKPLLETIEEETTYAR 172
           S+       E      AP   L+ +E+ S  E ++R+S+SRSKKPLLETIEEE   +R
Sbjct: 121 SKVEIPQDMERDDIDEAPRLSLEGIEDVSAHELIHRMSMSRSKKPLLETIEEEPIRSR 178

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224079391|ref|XP_002305848.1| predicted protein [Populus trichocarpa] gi|222848812|gb|EEE86359.1| predicted protein [Populus trichocarpa]

 Score =  179 bits (453), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 93/173 (53%), Positives = 116/173 (67%), Gaps = 6/173 (3%)

Query: 1   MGNHISCTLSKP--LGKHTRSAKVIFPGGEIRQIQTPIKAAELMLEKPNFFLINSRSLKI 58
           MGN++SCTLS P  L   ++S +VI P GEI++IQ   KAAELMLE PNFF+ N++SLKI
Sbjct: 1   MGNYVSCTLSNPQVLKNSSKSTRVILPTGEIKKIQQRTKAAELMLEAPNFFIANTKSLKI 60

Query: 59  GQRFSPLNADEDLEPKNVYVMFPMKRATSKITATDMATLFVLANKAVKRCSSGKVRNFPE 118
           G+RF PLNAD++L   NVYVMFPM +  S +TA DM  LF+ AN  +KR   G +R  PE
Sbjct: 61  GRRFCPLNADDELGKANVYVMFPMHKKNSVVTAGDMGALFITANSVMKRAFKGNIRVLPE 120

Query: 119 S----ESAGEEVAACTAPMPKLDDMEEFSQPEYVYRLSVSRSKKPLLETIEEE 167
           S        E      AP   L+ +EE S P   +R+S+SRSKKPLLETIEEE
Sbjct: 121 STVEISQNMERNDVDAAPRLSLEGIEEVSSPYSTHRMSMSRSKKPLLETIEEE 173

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255574284|ref|XP_002528056.1| conserved hypothetical protein [Ricinus communis] gi|223532517|gb|EEF34306.1| conserved hypothetical protein [Ricinus communis]

 Score =  174 bits (441), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 92/180 (51%), Positives = 126/180 (70%), Gaps = 8/180 (4%)

Query: 1   MGNHISCTLSKPLGKHTR-SAKVIFPGGEIRQIQTPI--KAAELMLEKPNFFLINSRSLK 57
           MGN++S  L+ P+ + +R S KV+ P GEIR+I+ P   KAAELM++ P FF++N++SLK
Sbjct: 1   MGNYMSSKLANPIHRKSRKSTKVVLPTGEIRKIRQPTATKAAELMMDVPGFFVVNTKSLK 60

Query: 58  IGQRFSPLNADEDLEPKNVYVMFPMKRATSKITATDMATLFVLANKAVKR--CSSG--KV 113
           IG+RF PL+AD+DLE  NVYVM+PM R  S +TA DM  LFV ANK +KR  C      +
Sbjct: 61  IGKRFYPLSADDDLEKGNVYVMYPMYRKNSVVTAGDMVVLFVTANKVMKRGACKGNDINI 120

Query: 114 RNFPESE-SAGEEVAACTAPMPKLDDMEEFSQPEYVYRLSVSRSKKPLLETIEEETTYAR 172
           +  PES+ SA E V    +P   L+ +E  S P++ YR+S+SRSKKPLLETI+EE+  +R
Sbjct: 121 KVLPESQSSAAEGVEDEASPRLSLEGIEHVSTPQFRYRMSISRSKKPLLETIQEESICSR 180

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356513983|ref|XP_003525687.1| PREDICTED: uncharacterized protein LOC100783889 [Glycine max]

 Score =  171 bits (434), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 95/175 (54%), Positives = 119/175 (68%), Gaps = 19/175 (10%)

Query: 1   MGNHISCTLSKP-LGKHTRSAKVIFPGGEIRQIQTPIKAAELMLEKPNFFLINSRSLKIG 59
           MGN+ISCTLS     KH R  KVIFP GEI Q++  +KAAELMLE P+FF++++RSL+IG
Sbjct: 1   MGNYISCTLSTAGSSKHWRGIKVIFPSGEIEQLEEGVKAAELMLEMPSFFVVDTRSLQIG 60

Query: 60  QRFSPLNADEDLEPKNVYVMFPMKRATSKITATDMATLFVLANKAVKRCSSGKVRNFPES 119
           +RFS LNADE+LE  NVYVM PMKR  S + A+DM  L + A    KR S+ KV      
Sbjct: 61  RRFSALNADEELECGNVYVMLPMKRLNSLVKASDMGALLLTA----KRVSAKKV------ 110

Query: 120 ESAGEEVAACTAPMPKL--DDMEEFSQPEYVYRLSVSRSKKPLLETIEEETTYAR 172
                 + A   P  KL  DD++EFS PE+++RLS+SRSKKPLLETI EE   +R
Sbjct: 111 ------IPAEKEPELKLDCDDIQEFSSPEFMHRLSMSRSKKPLLETIAEEPVSSR 159

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449466290|ref|XP_004150859.1| PREDICTED: uncharacterized protein LOC101213469 [Cucumis sativus] gi|449523285|ref|XP_004168654.1| PREDICTED: uncharacterized LOC101213469 [Cucumis sativus]

 Score =  171 bits (432), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 89/178 (50%), Positives = 119/178 (66%), Gaps = 10/178 (5%)

Query: 1   MGNHISCTLSKPLGKHTRSAKVIFPGGEIRQIQTPIKAAELMLEKPNFFLINSRSLKIGQ 60
           MGN+ISC L+ PL K++++ +V+ PGGE+RQ +  +KAAELMLE P+ FL N++SL IG+
Sbjct: 1   MGNYISCALATPLIKNSKAVRVVLPGGEVRQFRDSVKAAELMLESPSHFLANAQSLHIGR 60

Query: 61  RFSPLNADEDLEPKNVYVMFPMKRATSKITATDMATLFVLANKAVKRCSSGKV------R 114
           RFS L ADE+LE  NVY+MFPMKR  S +TA D+AT F+ AN A +R SS K+      R
Sbjct: 61  RFSALAADEELEFGNVYLMFPMKRVNSVVTAADLATFFMAANSAARRISSAKIRVLNENR 120

Query: 115 NFPESESAGEEVAACTAPMPKLDDMEEFSQPEYVYRLSVSRSKKPLLETIEEETTYAR 172
           N   SE+          P   L+ +E F     ++RLSV RS+KPLLETI+EE   +R
Sbjct: 121 NLQASEAMPRISDGNEGPRLSLEGVEGFP----MHRLSVCRSRKPLLETIKEEQIRSR 174

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	172
TAIR|locus:2167255	183	AT5G17350 "AT5G17350" [Arabido	0.953	0.896	0.486	1.9e-35
TAIR|locus:2097740	166	AT3G03280 "AT3G03280" [Arabido	0.936	0.969	0.473	8.3e-35
TAIR|locus:2132173	202	AT4G02090 "AT4G02090" [Arabido	0.860	0.732	0.257	1.1e-09
TAIR|locus:2077952	152	AT3G50800 "AT3G50800" [Arabido	0.627	0.710	0.272	1.4e-09
TAIR|locus:2115145	168	AT4G37240 "AT4G37240" [Arabido	0.558	0.571	0.281	8.7e-08
TAIR|locus:2011751	216	AT1G76600 "AT1G76600" [Arabido	0.656	0.523	0.25	2.9e-06
TAIR|locus:2154955	156	AT5G66580 "AT5G66580" [Arabido	0.534	0.589	0.268	4e-06
TAIR|locus:2028942	225	AT1G66480 "AT1G66480" [Arabido	0.441	0.337	0.324	5.4e-06
TAIR|locus:2014174	176	AT1G18290 "AT1G18290" [Arabido	0.616	0.602	0.262	0.00023
TAIR|locus:2038776	215	At17.1 "AT2G01340" [Arabidopsi	0.395	0.316	0.388	0.00035

TAIR|locus:2167255 AT5G17350 "AT5G17350" [Arabidopsis thaliana (taxid:3702)]

 Score = 383 (139.9 bits), Expect = 1.9e-35, P = 1.9e-35
 Identities = 90/185 (48%), Positives = 124/185 (67%)

Query:     1 MGNHISCTLSKPLGKHTRSAKVIFPGGEIRQIQTPIKAAELMLEKPNFFLINSRSLKIGQ 60
             MGN++S  LSK     + +AKVI P G +R I  P+KAAELM+E P+FFL++++SLKIG+
Sbjct:     1 MGNYVSSALSKTSSSSSSAAKVILPDGGVRNIHAPMKAAELMMEIPSFFLVDAKSLKIGR 60

Query:    61 RFSPLNADEDLEPK--NVYVMFPMKRATSKITATDMATLFVLANK-------------AV 105
             +F PL AD+DL+ K  +VYV FPM RATS   A+D+A LFV A K             AV
Sbjct:    61 KFCPLAADDDLQIKGCHVYVAFPMTRATSAANASDLARLFVAAKKQRRHRVGSDHSSAAV 120

Query:   106 KRC-SSGKVRNFPESESAGEEVAACTAPMP-KLDDMEEFSQPEYVYRLSVSRSKKPLLET 163
             K C ++G+V   P+ E  G++V   +A     L+D+EEFS  E+++R+SVS+SKKP LET
Sbjct:   121 KHCHNNGRVS--PDGE--GDDVKVISAGSKLNLEDIEEFSAAEFMHRISVSKSKKPKLET 176

Query:   164 IEEET 168
             I EE+
Sbjct:   177 IVEES 181

GO:0003674 "molecular_function" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

TAIR|locus:2097740 AT3G03280 "AT3G03280" [Arabidopsis thaliana (taxid:3702)]

 Score = 377 (137.8 bits), Expect = 8.3e-35, P = 8.3e-35
 Identities = 80/169 (47%), Positives = 114/169 (67%)

Query:     1 MGNHISCTLSKPLGKHTRSAKVIFPGGEIRQIQTPIKAAELMLEKPNFFLINSRSLKIGQ 60
             MGN++SC L+K     +  AKVI P G +R I  P KAAELM+E P++FL++++S+K+G+
Sbjct:     1 MGNYVSCALNKT--SSSPLAKVILPDGGVRDIHVPTKAAELMMEMPSYFLVDTKSVKVGR 58

Query:    61 RFSPLNADEDLEPK--NVYVMFPMKRATSKITATDMATLFVLANKAVKRCSSGKVRNFPE 118
             +F PL AD+DL+    +VYV FPM RATS   A+DMA L++   K  K C   +V   PE
Sbjct:    59 KFIPLAADDDLDLGGCHVYVAFPMTRATSAANASDMARLYLTGKKRTKNCGHRRVS--PE 116

Query:   119 SESAGEEVAACTAPMPKLDDMEEFSQPEYVYRLSVSRSKKPLLETIEEE 167
             +E   ++V     P   L+D+EEFS  E+++R+SVS+SKKP LETI E+
Sbjct:   117 NED-NDDVRLI-GPKLNLEDIEEFSAAEFIHRISVSKSKKPQLETIAED 163

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

TAIR|locus:2132173 AT4G02090 "AT4G02090" [Arabidopsis thaliana (taxid:3702)]

 Score = 140 (54.3 bits), Expect = 1.1e-09, P = 1.1e-09
 Identities = 45/175 (25%), Positives = 85/175 (48%)

Query:    19 SAKVIFPGGEIRQIQTPIKAAELMLEKPNFFLI---------NSRSLKIGQRFSPLNADE 69
             + KV+   G ++ ++     AE+MLE P   ++         N+ +  + ++ +PL AD+
Sbjct:    17 AGKVVLSDGRVQNLEEETTVAEIMLENPQHVVVEFDPSSISFNNDAKTVKRKLAPLPADK 76

Query:    70 DLEPKNVYVMFPMKRATSK--------ITATDMATLFVLANKAVKRCSS---G-----KV 113
              LEP  +Y++ P KR+  +        +T+ +M  +   A   V+   S   G       
Sbjct:    77 TLEPGKIYLVLPAKRSGGRAAKSSSAVLTSEEMRKMLFSATAMVRSSFSYYEGILPWFTT 136

Query:   114 RNFPESESAGEEVAACTAPMPKLD-DMEEFSQPEYVYRLSVSRSKKPLLETIEEE 167
             R++  +  A + V A T+ + +L+ +MEE  +PE++ R    R  KP L+ I E+
Sbjct:   137 RSYKNNNPATDTVVAATS-VGRLEAEMEEEDRPEFLSRQLSGRGWKPSLDPIREK 190

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

TAIR|locus:2077952 AT3G50800 "AT3G50800" [Arabidopsis thaliana (taxid:3702)]

 Score = 139 (54.0 bits), Expect = 1.4e-09, P = 1.4e-09
 Identities = 30/110 (27%), Positives = 53/110 (48%)

Query:    15 KHTRSAKVIFPGGEIRQIQTPIKAAELMLEKPNFFLINSRSLKIGQRFSPLNADEDLEPK 74
             + T +AK+I P G +++  TP+K  +++ + P  F+ NS  +        +   EDL P 
Sbjct:    10 RRTETAKLILPDGTLQEFSTPVKVWQILQKNPTSFVCNSDDMDFDDAVLAVPGSEDLRPG 69

Query:    75 NVYVMFPMKRATSKITATDMATLFVLANKAVKRCSSGKVRNFPESESAGE 124
              +Y + P+      + A +MA L V A+ A+ +   G +      E  GE
Sbjct:    70 ELYFVLPLTWLNHPLRADEMAALAVKASSALAKSGGGGLSY--NDEDVGE 117

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

TAIR|locus:2115145 AT4G37240 "AT4G37240" [Arabidopsis thaliana (taxid:3702)]

 Score = 122 (48.0 bits), Expect = 8.7e-08, P = 8.7e-08
 Identities = 27/96 (28%), Positives = 48/96 (50%)

Query:    19 SAKVIFPGGEIRQIQTPIKAAELMLEKPNFFLINSRSLKIGQRFSPLNADEDLEPKNVYV 78
             +AK+I   G + +   P+K   ++L+ P  F+ NS  +      + ++ADE+L+   +Y 
Sbjct:    14 TAKLILQDGRMMEFANPVKVGYVLLKYPMCFICNSDDMDFDDAVAAISADEELQLGQIYF 73

Query:    79 MFPMKRATSKITATDMATLFVLANKAVKRCSSGKVR 114
               P+      + A +MA L V A+ A+ R   G  R
Sbjct:    74 ALPLCWLRQPLKAEEMAALAVKASSALMRGGGGGCR 109

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

TAIR|locus:2011751 AT1G76600 "AT1G76600" [Arabidopsis thaliana (taxid:3702)]

 Score = 119 (46.9 bits), Expect = 2.9e-06, P = 2.9e-06
 Identities = 31/124 (25%), Positives = 65/124 (52%)

Query:     1 MGNHISCTLSKPLGKHTRSAKVIFPGGEIRQIQTPIKAAELMLEKP----------NFFL 50
             MG  +S   ++ +   T +AK++   G++R+   P+ A++++  +           ++FL
Sbjct:     1 MGLCVSVNRNEYVSSST-TAKIVTINGDLREYDVPVLASQVLESESTSSSSSSSSSSYFL 59

Query:    51 INSRSLKIGQRFSPLNADEDLEPKNVYVMFPMKRATSKITATDMATLFVLANKAVKRCSS 110
              NS SL        + +DE L+   +Y + P+ +   +++A+DMA L V A+ A+++ + 
Sbjct:    60 CNSDSLYYDDFIPAIESDEILQANQIYFVLPISKRQYRLSASDMAALAVKASVAIEKAAG 119

Query:   111 GKVR 114
              K R
Sbjct:   120 KKNR 123

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0005730 "nucleolus" evidence=IDA

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0009873 "ethylene mediated signaling pathway" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0035556 "intracellular signal transduction" evidence=RCA

TAIR|locus:2154955 AT5G66580 "AT5G66580" [Arabidopsis thaliana (taxid:3702)]

 Score = 111 (44.1 bits), Expect = 4.0e-06, P = 4.0e-06
 Identities = 25/93 (26%), Positives = 48/93 (51%)

Query:    19 SAKVIFPGGEIRQIQTPIKAAELMLEKPNFFLINSRSLKIGQRFSPLNADEDLEPKNVYV 78
             SAK+I   G +++  +P+K  +++ + P  F+ NS  +      S +  +E+L    +Y 
Sbjct:    14 SAKLILLDGTLQEFSSPVKVWQILQKNPTSFVCNSDEMDFDDAVSAVAGNEELRSGQLYF 73

Query:    79 MFPMKRATSKITATDMATLFVLANKAVKRCSSG 111
             + P+      + A +MA L V A+ A+ + S G
Sbjct:    74 VLPLTWLNHPLRAEEMAALAVKASSALTK-SGG 105

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

TAIR|locus:2028942 AT1G66480 "AT1G66480" [Arabidopsis thaliana (taxid:3702)]

 Score = 118 (46.6 bits), Expect = 5.4e-06, P = 5.4e-06
 Identities = 25/77 (32%), Positives = 45/77 (58%)

Query:    18 RSAKVIFPGGEIRQIQTPIKAAELMLEKPNFFLINSRSLK-IGQRFSPLNADEDLEPKNV 76
             + AKV+   GE  +I+TP+ A E+  + P + L++S+++K  G R  PL  ++ L+PK  
Sbjct:    10 KRAKVMKIDGETFRIKTPVTAREVTADYPGYVLLDSQAVKHFGVRSKPLEPNQTLKPKKT 69

Query:    77 YVMFPMKRATSKITATD 93
             Y +  + +   + TA D
Sbjct:    70 YFLVELPKLPPETTAVD 86

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

GO:0009693 "ethylene biosynthetic process" evidence=RCA

TAIR|locus:2014174 AT1G18290 "AT1G18290" [Arabidopsis thaliana (taxid:3702)]

 Score = 104 (41.7 bits), Expect = 0.00023, P = 0.00023
 Identities = 31/118 (26%), Positives = 60/118 (50%)

Query:     1 MGNHISCTLSKPLGKHTRSA----KVIFP-GGEIRQIQTPIKAAELMLEKPNFFLINSRS 55
             MGN  SC    PL   T S+    K++ P  G +     PIK ++++      F+ +S  
Sbjct:     1 MGNTSSCA---PLIISTNSSSGVVKILAPFTGTLEVFSKPIKTSDIVSRHSGHFITDSTL 57

Query:    56 LKIGQRFSPLNADEDLEPK-NVYVMFPMKRATSKITATDMATLFVLANKAVKRCSSGK 112
             L+I  R + ++ DE L P+ ++Y++ P     S +T  +++   +++NKA +  +  +
Sbjct:    58 LQISHRVTAVSPDEYLRPRRHLYLLLPTDMLFSVLTQEELS---LISNKAAETLNKSR 112

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

TAIR|locus:2038776 At17.1 "AT2G01340" [Arabidopsis thaliana (taxid:3702)]

 Score = 105 (42.0 bits), Expect = 0.00035, P = 0.00035
 Identities = 28/72 (38%), Positives = 43/72 (59%)

Query:    14 GKHTRSAKVIFPGGEIRQIQTPIKAAELMLEKPNFFLINSRSLK-IGQRFSPLNADEDLE 72
             GK T   KV+   GE  +++TP+ A E++ + P   L++S S+K  G R  PL A + LE
Sbjct:     7 GKKT--TKVMKIDGETFKLKTPVTAEEVLKDFPGHVLLDSESVKHYGARAKPLEAKQRLE 64

Query:    73 PKNVY-VMFPMK 83
              K +Y V+ P+K
Sbjct:    65 AKRLYFVVEPVK 76


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.315   0.130   0.365    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      172       172   0.00093  108 3  11 22  0.42    32
                                                     31  0.48    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  10
  No. of states in DFA:  555 (59 KB)
  Total size of DFA:  131 KB (2083 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  16.94u 0.09s 17.03t   Elapsed:  00:00:00
  Total cpu time:  16.94u 0.09s 17.03t   Elapsed:  00:00:00
  Start:  Sat May 11 02:46:51 2013   End:  Sat May 11 02:46:51 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

GO:0009624 "response to nematode" evidence=IEP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	172
pfam14009	181	pfam14009, DUF4228, Domain of unknown function (DU	2e-39

>gnl|CDD|222492 pfam14009, DUF4228, Domain of unknown function (DUF4228)

 Score =  131 bits (332), Expect = 2e-39
 Identities = 62/183 (33%), Positives = 90/183 (49%), Gaps = 19/183 (10%)

Query: 1   MGNHISCTLSKPLGKHTRSAKVIFPGGEIRQIQTPIKAAELMLEKPNFFLINSRSLKIGQ 60
           MGN +SC L+        + KV+ P G++R+   P+ AAELMLE P  F+ +S SL IG+
Sbjct: 1   MGNCLSCCLAPSGA--AATVKVVHPDGKVREYSRPVTAAELMLEYPGHFVCDSDSLYIGR 58

Query: 61  RFSPLNADEDLEPKNVYVMFPMKRATSKITATDMATLFVLANKA---------------- 104
           R   L  D++LE   +Y + P +R  S + A DMA+L   A+ A                
Sbjct: 59  RIPALPPDDELERGQLYFLLPAERLQSVLAAKDMASLASSASSALKSASAKRSSSSRPSP 118

Query: 105 VKRCSSGKVR-NFPESESAGEEVAACTAPMPKLDDMEEFSQPEYVYRLSVSRSKKPLLET 163
           V++   G VR     S+   EE+    +    L ++ E  +     R S SRS +P LET
Sbjct: 119 VRKSDGGVVRVKVVVSKEELEELLEEGSVSASLSELCETPELRKRSRGSRSRSWRPKLET 178

Query: 164 IEE 166
           I E
Sbjct: 179 ISE 181

This domain is found in plants. The function is not known. Length = 181

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	172
PF14009	181	DUF4228: Domain of unknown function (DUF4228)	100.0

>PF14009 DUF4228: Domain of unknown function (DUF4228)

Probab=100.00  E-value=9.7e-41  Score=261.15  Aligned_cols=105  Identities=39%  Similarity=0.741  Sum_probs=97.4

Q ss_pred             CCCcccCCcCCCCCCCCcceEEEccCCcEEEecCCccHHHHHhhCCCcEEEccCCcccCCcccCCCCCCCCCCCCeEEEE
Q 040603            1 MGNHISCTLSKPLGKHTRSAKVIFPGGEIRQIQTPIKAAELMLEKPNFFLINSRSLKIGQRFSPLNADEDLEPKNVYVMF   80 (172)
Q Consensus         1 MGN~~Sc~~~~~~~~~~~~~kVv~~dG~v~~~~~pv~aaevm~e~P~h~Vc~s~~l~~g~~~~~L~~de~L~~G~~Yfll   80 (172)
                      ||||+||...  ......++||||+||+|++|+.||+|+|||.+||+||||+++.+.+|.++++|++||+|++|++||||
T Consensus         1 MGn~~~~~~~--~~~~~~~vkvv~~~G~v~~~~~pv~a~evm~~~P~h~v~~~~~~~~~~~~~~l~~d~~L~~G~~Y~ll   78 (181)
T PF14009_consen    1 MGNCVSCCLA--SSSSAATVKVVHPDGKVEEFKRPVTAAEVMLENPGHFVCDSDSFRFGRRIKPLPPDEELQPGQIYFLL   78 (181)
T ss_pred             CCCccccccc--ccCCCceEEEEcCCCcEEEeCCCcCHHHHHHHCCCCEEeccccccCCCcccCCCccCeecCCCEEEEE
Confidence            9999998764  12467899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ecCCCCCCCCHHHHHHHHHHHhHhhhh
Q 040603           81 PMKRATSKITATDMATLFVLANKAVKR  107 (172)
Q Consensus        81 P~~~~~~~ls~~~~a~L~~~a~~~~~~  107 (172)
                      |+++++..++..++++++.+++.+...
T Consensus        79 P~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (181)
T PF14009_consen   79 PMSRLQSVLSASDMASLASSASSASSS  105 (181)
T ss_pred             EccccCcccccchhcccccchhhcccc
Confidence            999999999999999999988777664

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	172
d1tkea1	62	Threonyl-tRNA synthetase (ThrRS), N-terminal 'addi	87.19
d1nyra2	59	Threonyl-tRNA synthetase (ThrRS), N-terminal 'addi	84.67

>d1tkea1 d.15.10.1 (A:1-62) Threonyl-tRNA synthetase (ThrRS), N-terminal 'additional' domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: beta-Grasp (ubiquitin-like)
superfamily: TGS-like
family: TGS domain
domain: Threonyl-tRNA synthetase (ThrRS), N-terminal 'additional' domain
species: Escherichia coli [TaxId: 562]

Probab=87.19  E-value=0.25  Score=30.29  Aligned_cols=25  Identities=16%  Similarity=0.469  Sum_probs=22.5

Q ss_pred             eEEEccCCcEEEecCCccHHHHHhh
Q 040603           20 AKVIFPGGEIRQIQTPIKAAELMLE   44 (172)
Q Consensus        20 ~kVv~~dG~v~~~~~pv~aaevm~e   44 (172)
                      ++|.+|||.+++|...+|+.|+-..
T Consensus         2 ~~ItlPDG~~~~~~~g~T~~diA~~   26 (62)
T d1tkea1           2 PVITLPDGSQRHYDHAVSPMDVALD   26 (62)
T ss_dssp             CEEECTTSCEEECSSCBCHHHHHHH
T ss_pred             CEEECCCCCEEEcCCCCCHHHHHHH
Confidence            4678899999999999999999865

>d1nyra2 d.15.10.1 (A:4-62) Threonyl-tRNA synthetase (ThrRS), N-terminal 'additional' domain {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a+b)
fold: beta-Grasp (ubiquitin-like)
superfamily: TGS-like
family: TGS domain
domain: Threonyl-tRNA synthetase (ThrRS), N-terminal 'additional' domain
species: Staphylococcus aureus [TaxId: 1280]

Probab=84.67  E-value=0.095  Score=32.11  Aligned_cols=26  Identities=12%  Similarity=0.330  Sum_probs=22.9

Q ss_pred             eEEEccCCcEEEecCCccHHHHHhhC
Q 040603           20 AKVIFPGGEIRQIQTPIKAAELMLEK   45 (172)
Q Consensus        20 ~kVv~~dG~v~~~~~pv~aaevm~e~   45 (172)
                      ++|.+|||.+++|..++|+.|+-..-
T Consensus         1 I~ItlPDG~~~~~~~g~T~~diA~~I   26 (59)
T d1nyra2           1 INIQFPDGNKKAFDKGTTTEDIAQSI   26 (59)
T ss_dssp             CBBCCTTSCCCBCCTTCCHHHHHHTT
T ss_pred             CEEECCCCCEEEcCCCCCHHHHHHHH
Confidence            46779999999999999999998654