Citrus Sinensis ID: 040617

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------
Protein Sequence
MAPVGLPPGFRFHPTDEELVNYYLKRKINGQEIELDIIPEVDLYKCEPWELAEKSFLPSRDPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRVTYQSRAIGMKKTLVYYRGRAPQGIRTDWVMHEYRLDDKECDDISAGIQDSYALCRVFKKNGICSEMEDQHGQCSGLSSSLMENSQQSHGISIECETMSPDVPINSSSCIDEEDKDDSWMQFITDDPWCSSNSTSTTFTGDQVSHLEFTN
Secondary Structure (PSIPRED)
ccccccccccccccccHHHHHHHHHHHHcccccccccccEEEcccccccccccccccccccccEEEEccccccccccccccccccccccccccccccccccccEEEEEEEccccccccccccccccEEEEEEccccccccccccccccEEEEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccHHHHHHHHHHHHHccccccEcEEEEEEEEccccccccHHccccccccEEEEEccccccccccccccccccccEEEEccccccEcccccEEEEEEEEEEEcccccccccccEEEEEEEcccccHccccccccccEEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
mapvglppgfrfhptdEELVNYYLKRKIngqeieldiipevdlykcepwelaeksflpsrdpewyffgprdrkypngfrtnratragywkstgkdrrVTYQSRAIGMKKTLVYYrgrapqgirtdWVMHEyrlddkecddisagIQDSYALCRVFKkngicsemedqhgqcsglssslmensqqshgisiecetmspdvpinssscideedkddswmqfitddpwcssnststtftgdqvshleftn
Flexible Loop (DISEMBL)
mapvglppgfrfhptdEELVNYYLKRKINGQEIELDIIPEVDLYKCEPWElaeksflpsrdpewyffgprdrkypngfrtnratragywkstgkdrrvtyqsraigmkktlvyyrgrapqgirtdwVMHEYRLDDKECDDISAGIQDSYALCRVFKKNGICSEMEDQHGQCSGLSSSLMENSQQSHGISIECETMSPDVPINSSSCIDEEDKDDSWMQFITDDPWCSSnststtftgdqvshleftn
Low Complexity Region (SEG)
MAPVGLPPGFRFHPTDEELVNYYLKRKINGQEIELDIIPEVDLYKCEPWELAEKSFLPSRDPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRVTYQSRAIGMKKTLVYYRGRAPQGIRTDWVMHEYRLDDKECDDISAGIQDSYALCRVFKKNGICSEMEDQHGQCSGLSSSLMENSQQSHGISIECETMSPDVPINSSSCIDEEDKDDSWMQFITDDPWCSSNSTSTTFTGDQVSHLEFTN
Disordered region (IsUnstruct)
*********FRFHPTDEELVNYYLKRKINGQEIELDIIPEVDLYKCEPWELAEKSFLPSRDPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRVTYQSRAIGMKKTLVYYRGRAPQGIRTDWVMHEYRLDDKECDDISAGIQDSYALCRVFKKNGICS*****************************************************WMQFITDDPWC*********************
Disordered Region (DISOPRED)
***VGLPPGFRFHPTDEELVNYYLKRKINGQEIELDIIPEVDLYKCEPWELAEKSFLPSRDPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRVTYQSRAIGMKKTLVYYRGRAPQGIRTDWVMHEYRL***************YALCRVFK*******************************************************************************************
Disordered Region (DISEMBL)
MAPVGLPPGFRFHPTDEELVNYYLKRKINGQEIELDIIPEVDLYKCEPWELAEKSFLPSRDPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRVTYQSRAIGMKKTLVYYRGRAPQGIRTDWVMHEYRLDDKECDDISAGIQDSYALCRVFKKNGICSEM**********************GISIECETMSPDVPINSSSCIDEEDKDDSWMQFITDDPWCSSNSTSTTFTGDQVSHLEFTN
Disordered Region (DISPRO)
****GLPPGFRFHPTDEELVNYYLKRKINGQEIELDIIPEVDLYKCEPWELAEKSFLPSRDPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRVTYQSRAIGMKKTLVYYRGRAPQGIRTDWVMHEYRLDDKECDDISAGIQDSYALCRVFKKNG****************************************************************************************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAPVGLPPGFRFHPTDEELVNYYLKRKINGQEIELDIIPEVDLYKCEPWELAEKSFLPSRDPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRVTYQSRAIGMKKTLVYYRGRAPQGIRTDWVMHEYRLDDKECDDISAGIQDSYALCRVFKKNGICSEMEDQHGQCSGLSSSLMENSQQSHGISIECETMSPDVPINSSSCIDEEDKDDSWMQFITDDPWCSSNSTSTTFTGDQVSHLEFTN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	247	2.2.26 [Sep-21-2011]
Q84K00	567	NAC domain-containing pro	no	no	0.655	0.285	0.587	7e-53
Q7GCL7	489	NAC domain-containing pro	no	no	0.615	0.310	0.588	2e-52
Q9SV87	341	Protein BEARSKIN1 OS=Arab	no	no	0.736	0.533	0.5	3e-49
Q9FWX2	395	NAC domain-containing pro	no	no	0.603	0.377	0.535	1e-47
Q9C878	305	Protein BEARSKIN1 OS=Arab	no	no	0.615	0.498	0.547	2e-47
Q9M274	334	NAC domain-containing pro	no	no	0.627	0.464	0.488	1e-46
Q9MA17	371	Protein SOMBRERO OS=Arabi	no	no	0.607	0.404	0.570	2e-46
O49255	268	NAC transcription factor	no	no	0.655	0.604	0.514	2e-46
Q52QH4	318	NAC domain-containing pro	no	no	0.773	0.600	0.453	2e-46
Q84WP6	365	NAC domain-containing pro	no	no	0.668	0.452	0.478	3e-46

>sp|Q84K00|NAC78_ARATH NAC domain-containing protein 78 OS=Arabidopsis thaliana GN=NAC078 PE=2 SV=2

 Score =  207 bits (526), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 97/165 (58%), Positives = 123/165 (74%), Gaps = 3/165 (1%)

Query: 6   LPPGFRFHPTDEELVNYYLKRKINGQEIELDIIPEVDLYKCEPWELAEKSFLPSRDPEWY 65
           L PGFRFHPTDEELV YYLKRK+  +  + D I   D+YK EPW+L +KS L SRD EWY
Sbjct: 9   LAPGFRFHPTDEELVRYYLKRKVCNKPFKFDAISVTDIYKSEPWDLPDKSKLKSRDLEWY 68

Query: 66  FFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRVTYQSRAIGMKKTLVYYRGRAPQGIRTD 125
           FF   D+KY NG +TNRAT  GYWK+TGKDR +   SR +GMKKTLVY++GRAP+G RT+
Sbjct: 69  FFSMLDKKYSNGSKTNRATEKGYWKTTGKDREIRNGSRVVGMKKTLVYHKGRAPRGERTN 128

Query: 126 WVMHEYRLDDKECDDISAGI-QDSYALCRVFKKNGICSEMEDQHG 169
           WVMHEYRL D++     AG+ Q++Y LCR+F+K+G   +  +Q+G
Sbjct: 129 WVMHEYRLSDEDLK--KAGVPQEAYVLCRIFQKSGTGPKNGEQYG 171

Arabidopsis thaliana (taxid: 3702)

>sp|Q7GCL7|NAC74_ORYSJ NAC domain-containing protein 74 OS=Oryza sativa subsp. japonica GN=NAC74 PE=2 SV=1

 Score =  205 bits (522), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 90/153 (58%), Positives = 119/153 (77%), Gaps = 1/153 (0%)

Query: 6   LPPGFRFHPTDEELVNYYLKRKINGQEIELDIIPEVDLYKCEPWELAEKSFLPSRDPEWY 65
           LPPGF FHP D EL+++YLK+KI+GQ+IE +IIPEVD+YK EPW+L  K  +P++D +W+
Sbjct: 9   LPPGFGFHPKDTELISHYLKKKIHGQKIEYEIIPEVDIYKHEPWDLPAKCDVPTQDNKWH 68

Query: 66  FFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRVTYQSRAIGMKKTLVYYRGRAPQGIRTD 125
           FF  RDRKYPNG R+NRAT AGYWKSTGKDR +    + IG KKTLV++ GR P G RT+
Sbjct: 69  FFAARDRKYPNGSRSNRATVAGYWKSTGKDRAIKMGKQTIGTKKTLVFHEGRPPTGRRTE 128

Query: 126 WVMHEYRLDDKECDDISAGIQDSYALCRVFKKN 158
           W+MHEY +D++EC      ++D+Y LCR+ K+N
Sbjct: 129 WIMHEYYIDEREC-QACPDMKDAYVLCRITKRN 160

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9SV87|BRN2_ARATH Protein BEARSKIN1 OS=Arabidopsis thaliana GN=BRN2 PE=2 SV=1

 Score =  195 bits (495), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 93/186 (50%), Positives = 128/186 (68%), Gaps = 4/186 (2%)

Query: 5   GLPPGFRFHPTDEELVNYYLKRKINGQEIELDIIPEVDLYKCEPWELAEKSFLPSR-DPE 63
           G+PPGFRFHPTDEEL++YYLK+KI+ Q+ E+++I EVDL K EPW+L E+  + S    E
Sbjct: 8   GVPPGFRFHPTDEELLHYYLKKKISYQKFEMEVIREVDLNKLEPWDLQERCKIGSTPQNE 67

Query: 64  WYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRVTYQSRAIGMKKTLVYYRGRAPQGIR 123
           WYFF  +DRKYP G RTNRAT AG+WK+TG+D+ +    + IGM+KTLV+Y+GRAP G +
Sbjct: 68  WYFFSHKDRKYPTGSRTNRATHAGFWKATGRDKCIRNSYKKIGMRKTLVFYKGRAPHGQK 127

Query: 124 TDWVMHEYRLDDKECDDISAG-IQDSYALCRVFKKNGICSEMEDQHGQCSGLSSSLMENS 182
           TDW+MHEYRL+D   DD  A   +D + +CRVF K  +   + +     + L     + S
Sbjct: 128 TDWIMHEYRLED--ADDPQANPSEDGWVVCRVFMKKNLFKVVNEGSSSINSLDQHNHDAS 185

Query: 183 QQSHGI 188
             +H +
Sbjct: 186 NNNHAL 191

Transcription activator. Together with BRN1 and SMB, regulates cellular maturation of root cap. Promotes the expression of genes involved in secondary cell walls (SCW) biosynthesis.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FWX2|NAC7_ARATH NAC domain-containing protein 7 OS=Arabidopsis thaliana GN=NAC007 PE=2 SV=2

 Score =  190 bits (482), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 82/153 (53%), Positives = 115/153 (75%), Gaps = 4/153 (2%)

Query: 6   LPPGFRFHPTDEELVNYYLKRKINGQEIELDIIPEVDLYKCEPWELAEKSFLPSRD-PEW 64
           +PPGFRFHPTDEELV+YYL++K+  + IE+D I ++DLYK EPW+L E   +   +  +W
Sbjct: 7   VPPGFRFHPTDEELVDYYLRKKVASKRIEIDFIKDIDLYKIEPWDLQELCKIGHEEQSDW 66

Query: 65  YFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRVTYQSRAIGMKKTLVYYRGRAPQGIRT 124
           YFF  +D+KYP G RTNRAT+AG+WK+TG+D+ +  +   IGM+KTLV+Y+GRAP G ++
Sbjct: 67  YFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYLRHSLIGMRKTLVFYKGRAPNGQKS 126

Query: 125 DWVMHEYRLDDKECDDISAGIQDSYALCRVFKK 157
           DW+MHEYRL   E D+     ++ + +CRVFKK
Sbjct: 127 DWIMHEYRL---ETDENGTPQEEGWVVCRVFKK 156

Transcription factor probably involved in xylem formation.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9C878|BRN1_ARATH Protein BEARSKIN1 OS=Arabidopsis thaliana GN=BRN1 PE=2 SV=1

 Score =  189 bits (479), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 86/157 (54%), Positives = 119/157 (75%), Gaps = 5/157 (3%)

Query: 5   GLPPGFRFHPTDEELVNYYLKRKINGQEIELDIIPEVDLYKCEPWELAEKSFLPSR-DPE 63
           G+PPGFRFHPTDEEL++YYLK+KI+ ++ E+++I EVDL K EPW+L ++  + S    E
Sbjct: 7   GVPPGFRFHPTDEELLHYYLKKKISYEKFEMEVIKEVDLNKIEPWDLQDRCKIGSTPQNE 66

Query: 64  WYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRVTYQSRAIGMKKTLVYYRGRAPQGIR 123
           WYFF  +DRKYP G RTNRAT +G+WK+TG+D+ +    + IGM+KTLV+Y+GRAP G +
Sbjct: 67  WYFFSHKDRKYPTGSRTNRATHSGFWKATGRDKCIRNSYKKIGMRKTLVFYKGRAPHGQK 126

Query: 124 TDWVMHEYRLDDKECDDISAGIQDSYALCRVFKKNGI 160
           TDW+MHEYR++D E D      +D + +CRVFKK  +
Sbjct: 127 TDWIMHEYRIEDTEDDP----CEDGWVVCRVFKKKNL 159

Transcription activator. Together with SMB and BRN2, regulates cellular maturation of root cap. Promotes the expression of genes involved in secondary cell walls (SCW) biosynthesis.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9M274|NAC66_ARATH NAC domain-containing protein 66 OS=Arabidopsis thaliana GN=NAC066 PE=2 SV=1

 Score =  186 bits (472), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 86/176 (48%), Positives = 120/176 (68%), Gaps = 21/176 (11%)

Query: 6   LPPGFRFHPTDEELVNYYLKRKINGQEIELDIIPEVDLYKCEPWELAEKSFL---PSRDP 62
           +PPGFRFHPT+EEL+ YYL++KI+  +I+LD+IP++DL K EPW++ E   +   P  D 
Sbjct: 11  VPPGFRFHPTEEELLKYYLRKKISNIKIDLDVIPDIDLNKLEPWDIQEMCKIGTTPQND- 69

Query: 63  EWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRVTYQSRAIGMKKTLVYYRGRAPQGI 122
            WYF+  +D+KYP G RTNRAT  G+WK+TG+D+ +      IGM+KTLV+Y+GRAP G 
Sbjct: 70  -WYFYSHKDKKYPTGTRTNRATTVGFWKATGRDKTIYTNGDRIGMRKTLVFYKGRAPHGQ 128

Query: 123 RTDWVMHEYRLDD--------------KECDDISAGIQDSYALCRVFKKNGICSEM 164
           ++DW+MHEYRLD+              + CD I  G  + + +CRVFKKN +C  M
Sbjct: 129 KSDWIMHEYRLDESVLISSCGDHDVNVETCDVI--GSDEGWVVCRVFKKNNLCKNM 182

Transcription activator of genes involved in biosynthesis of secondary walls. Together with NST1, required for the secondary cell wall thickening of the anther endocethium, which is necessary for anther dehiscence. May also regulates the secondary cell wall lignification of other tissues such as tracheary elements.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9MA17|SMB_ARATH Protein SOMBRERO OS=Arabidopsis thaliana GN=SMB PE=1 SV=1

 Score =  186 bits (472), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 89/156 (57%), Positives = 119/156 (76%), Gaps = 6/156 (3%)

Query: 4   VGLPPGFRFHPTDEELVNYYLKRKINGQEIELDIIPEVDLYKCEPWELAEKSFLPSR-DP 62
           + +PPGFRFHPT+EEL+ YYLK+K++ + I+LD+I EVDL K EPWEL EK  + S    
Sbjct: 15  LSVPPGFRFHPTEEELLYYYLKKKVSYEPIDLDVIREVDLNKLEPWELKEKCRIGSGPQN 74

Query: 63  EWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRVTYQ-SRAIGMKKTLVYYRGRAPQG 121
           EWYFF  +D+KYP G RTNRAT AG+WK+TG+D+ +    S+ IG++KTLV+Y GRAP G
Sbjct: 75  EWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKSIHLNSSKKIGLRKTLVFYTGRAPHG 134

Query: 122 IRTDWVMHEYRLDDKECDDISAGIQDSYALCRVFKK 157
            +T+W+MHEYRLDD E ++I    +D + +CRVFKK
Sbjct: 135 QKTEWIMHEYRLDDSE-NEIQ---EDGWVVCRVFKK 166

Transcription regulator. Together with BRN1 and BRN2, regulates cellular maturation of root cap. Represses stem cell-like divisions in the root cap daughter cells, and thus promotes daughter cell fate. Inhibits expression of its positive regulator FEZ in a feedback loop for controlled switches in cell division plane. Promotes the expression of genes involved in secondary cell walls (SCW) biosynthesis.

Arabidopsis thaliana (taxid: 3702)

>sp|O49255|NAC29_ARATH NAC transcription factor 29 OS=Arabidopsis thaliana GN=NAC029 PE=2 SV=1

 Score =  186 bits (471), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 86/167 (51%), Positives = 116/167 (69%), Gaps = 5/167 (2%)

Query: 6   LPPGFRFHPTDEELVNYYLKRKINGQEIELDIIPEVDLYKCEPWELAEKSFLPSRDPEWY 65
           LPPGFRFHPTDEEL+ YYL+ +   +   + IIPEVD+YK +PW+L EK+     + EWY
Sbjct: 9   LPPGFRFHPTDEELIVYYLRNQTMSKPCPVSIIPEVDIYKFDPWQLPEKTEFG--ENEWY 66

Query: 66  FFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRVTYQSRAIGMKKTLVYYRGRAPQGIRTD 125
           FF PR+RKYPNG R NRA  +GYWK+TG D+ +   S  +G+KK LV+Y+GR P+GI+TD
Sbjct: 67  FFSPRERKYPNGVRPNRAAVSGYWKATGTDKAIHSGSSNVGVKKALVFYKGRPPKGIKTD 126

Query: 126 WVMHEYRLDD--KECDDISAGIQ-DSYALCRVFKKNGICSEMEDQHG 169
           W+MHEYRL D  K     +  ++ D + LCR++KK G    + +Q G
Sbjct: 127 WIMHEYRLHDSRKASTKRNGSMRLDEWVLCRIYKKRGASKLLNEQEG 173

May function in the transition between active cell division and cell expansion.

Arabidopsis thaliana (taxid: 3702)

>sp|Q52QH4|NAC68_ORYSJ NAC domain-containing protein 68 OS=Oryza sativa subsp. japonica GN=NAC68 PE=2 SV=1

 Score =  186 bits (471), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 93/205 (45%), Positives = 131/205 (63%), Gaps = 14/205 (6%)

Query: 2   APVGLPPGFRFHPTDEELVNYYLKRKINGQEIELDIIPEVDLYKCEPWELAEKSFLPSRD 61
           A + LPPGFRFHPTDEELV +YL RK+  Q + + II EVDLYK +PW+L EK+    + 
Sbjct: 17  AELNLPPGFRFHPTDEELVVHYLCRKVARQPLPVPIIAEVDLYKLDPWDLPEKALFGRK- 75

Query: 62  PEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRVTYQ--SRAIGMKKTLVYYRGRAP 119
            EWYFF PRDRKYPNG R NRA   GYWK+TG D+ V  +  +R +G+KK LV+Y G+AP
Sbjct: 76  -EWYFFTPRDRKYPNGSRPNRAAGRGYWKATGADKPVAPKGSARTVGIKKALVFYSGKAP 134

Query: 120 QGIRTDWVMHEYRLDDKECDDISAGIQ-----DSYALCRVFKKNGICSEMEDQHGQCSGL 174
           +G++TDW+MHEYRL D   D    G +     D + LCR++ K     +++ +    + +
Sbjct: 135 RGVKTDWIMHEYRLAD--ADRAPGGKKGSQKLDEWVLCRLYNKKNNWEKVKLEQQDVASV 192

Query: 175 SSSLMENSQQSHGISIE---CETMS 196
           +++   N    +G  ++    +TMS
Sbjct: 193 AAAAPRNHHHQNGEVMDAAAADTMS 217

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q84WP6|NAC43_ARATH NAC domain-containing protein 43 OS=Arabidopsis thaliana GN=NAC043 PE=2 SV=2

 Score =  185 bits (469), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 87/182 (47%), Positives = 121/182 (66%), Gaps = 17/182 (9%)

Query: 6   LPPGFRFHPTDEELVNYYLKRKINGQEIELDIIPEVDLYKCEPWELAEKSFL---PSRDP 62
           +PPGFRFHPT+EEL+ YYL++K+N  EI+LD+I +VDL K EPW++ E   +   P  D 
Sbjct: 16  VPPGFRFHPTEEELLQYYLRKKVNSIEIDLDVIRDVDLNKLEPWDIQEMCKIGTTPQND- 74

Query: 63  EWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRVTYQSRAIGMKKTLVYYRGRAPQGI 122
            WYFF  +D+KYP G RTNRAT AG+WK+TG+D+ +    R IGM+KTLV+Y+GRAP G 
Sbjct: 75  -WYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKIIYSNGRRIGMRKTLVFYKGRAPHGQ 133

Query: 123 RTDWVMHEYRLDDK--ECDDIS----------AGIQDSYALCRVFKKNGICSEMEDQHGQ 170
           ++DW+MHEYRLDD     +D++          A   + + +CR+FKK  +   +    G 
Sbjct: 134 KSDWIMHEYRLDDNIISPEDVTVHEVVSIIGEASQDEGWVVCRIFKKKNLHKTLNSPVGG 193

Query: 171 CS 172
            S
Sbjct: 194 AS 195

Transcription activator of genes involved in biosynthesis of secondary walls. Together with NST2 and NST3, required for the secondary cell wall thickening of sclerenchymatous fibers, secondary xylem (tracheary elements), and of the anther endocethium, which is necessary for anther dehiscence. May also regulates the secondary cell wall lignification of other tissues.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	247
224125708	230	NAC domain protein, IPR003441 [Populus t	0.919	0.986	0.874	1e-114
255569031	237	transcription factor, putative [Ricinus	0.959	1.0	0.821	1e-113
356561847	237	PREDICTED: NAC domain-containing protein	0.959	1.0	0.813	1e-112
359491819	247	PREDICTED: NAC domain-containing protein	0.898	0.898	0.878	1e-112
296088017	238	unnamed protein product [Vitis vinifera]	0.898	0.932	0.878	1e-111
356531066	237	PREDICTED: NAC domain-containing protein	0.959	1.0	0.809	1e-111
449439243	248	PREDICTED: NAC domain-containing protein	0.987	0.983	0.792	1e-109
224120448	230	NAC domain protein, IPR003441 [Populus t	0.914	0.982	0.857	1e-109
15229511	246	NAC domain containing protein 57 [Arabid	0.963	0.967	0.773	1e-102
297830402	246	predicted protein [Arabidopsis lyrata su	0.963	0.967	0.773	1e-101

>gi|224125708|ref|XP_002329698.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|222870606|gb|EEF07737.1| NAC domain protein, IPR003441 [Populus trichocarpa]

 Score =  416 bits (1069), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 202/231 (87%), Positives = 214/231 (92%), Gaps = 4/231 (1%)

Query: 1   MAPVGLPPGFRFHPTDEELVNYYLKRKINGQEIELDIIPEVDLYKCEPWELAEKSFLPSR 60
           M+PVGLPPGFRFHPTDEELVNYYLKRKINGQEIELDIIPEVDLYKCEPWELAEKSF PSR
Sbjct: 1   MSPVGLPPGFRFHPTDEELVNYYLKRKINGQEIELDIIPEVDLYKCEPWELAEKSFFPSR 60

Query: 61  DPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRVTYQSRAIGMKKTLVYYRGRAPQ 120
           DPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRV  Q+RAIGMKKTLVYYRGRAPQ
Sbjct: 61  DPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRVNCQNRAIGMKKTLVYYRGRAPQ 120

Query: 121 GIRTDWVMHEYRLDDKECDDISAGIQDSYALCRVFKKNGICSEMEDQHGQCSGLSSSLME 180
           GIRTDWVMHEYRLDDKEC+D S GIQDSYALCRVFKKNGICSE+E+Q GQC+  S SLME
Sbjct: 121 GIRTDWVMHEYRLDDKECEDTS-GIQDSYALCRVFKKNGICSEIEEQ-GQCTSTSLSLME 178

Query: 181 NSQQSHGISIECETMSPDVPINSSSCIDEEDKDDSWMQFITDDPWCSSNST 231
           +S Q  G+  E ETMSPDVPI SSSC++EEDKDDSWMQFITD+PWCSSN+ 
Sbjct: 179 SSPQ--GVINEYETMSPDVPIASSSCVEEEDKDDSWMQFITDEPWCSSNNA 227

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255569031|ref|XP_002525485.1| transcription factor, putative [Ricinus communis] gi|223535222|gb|EEF36900.1| transcription factor, putative [Ricinus communis]

 Score =  413 bits (1062), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 203/247 (82%), Positives = 219/247 (88%), Gaps = 10/247 (4%)

Query: 1   MAPVGLPPGFRFHPTDEELVNYYLKRKINGQEIELDIIPEVDLYKCEPWELAEKSFLPSR 60
           MAPVGLPPGFRFHPTDEELVNYYLKRKINGQEIELDIIPEVDLYKCEPWELAEKSFLPSR
Sbjct: 1   MAPVGLPPGFRFHPTDEELVNYYLKRKINGQEIELDIIPEVDLYKCEPWELAEKSFLPSR 60

Query: 61  DPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRVTYQSRAIGMKKTLVYYRGRAPQ 120
           DPEWYFFGPRDRKYPNGFRTNRATR GYWKSTGKDRRV  Q+RAIGMKKTLVYYRGRAPQ
Sbjct: 61  DPEWYFFGPRDRKYPNGFRTNRATRGGYWKSTGKDRRVNSQNRAIGMKKTLVYYRGRAPQ 120

Query: 121 GIRTDWVMHEYRLDDKECDDISAGIQDSYALCRVFKKNGICSEMEDQHGQCSGLSSSLME 180
           GIRTDWVMHEYRLDDKEC++ + GIQDSYALCRVFKKNGICSE+E+Q  QC   S SLME
Sbjct: 121 GIRTDWVMHEYRLDDKECEE-TTGIQDSYALCRVFKKNGICSEIEEQ-AQC---SISLME 175

Query: 181 NSQQSHGISIECETMSPDVPINSSSCIDEEDKDDSWMQFITDDPWCSSNSTSTTFTGDQV 240
           +SQ   G+  + ETMSPD+PI SS C D+EDKDDSWMQFITDDPWCS  S++    G++V
Sbjct: 176 SSQ---GVINDYETMSPDIPIASSCCADDEDKDDSWMQFITDDPWCS--SSTANLAGEEV 230

Query: 241 SHLEFTN 247
           SHL F +
Sbjct: 231 SHLTFAD 237

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356561847|ref|XP_003549188.1| PREDICTED: NAC domain-containing protein 74-like [Glycine max]

 Score =  409 bits (1051), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 201/247 (81%), Positives = 222/247 (89%), Gaps = 10/247 (4%)

Query: 1   MAPVGLPPGFRFHPTDEELVNYYLKRKINGQEIELDIIPEVDLYKCEPWELAEKSFLPSR 60
           M+PVGLPPGFRFHPTDEELVNYYLKRKINGQEIELDIIPEVDLYKCEPWELAEKSFLPSR
Sbjct: 1   MSPVGLPPGFRFHPTDEELVNYYLKRKINGQEIELDIIPEVDLYKCEPWELAEKSFLPSR 60

Query: 61  DPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRVTYQSRAIGMKKTLVYYRGRAPQ 120
           DPEWYFFGPRDRKYPNG+RTNRATRAGYWKSTGKDRRV+ QSR IGMKKTLVYYRGRAPQ
Sbjct: 61  DPEWYFFGPRDRKYPNGYRTNRATRAGYWKSTGKDRRVSCQSRPIGMKKTLVYYRGRAPQ 120

Query: 121 GIRTDWVMHEYRLDDKECDDISAGIQDSYALCRVFKKNGICSEMEDQHGQCSGLSSSLME 180
           GIRTDWVMHEYRLDDKEC+D + G+QD+YALCRVFKKNGICS++E+Q GQC   S SL+E
Sbjct: 121 GIRTDWVMHEYRLDDKECED-TTGLQDTYALCRVFKKNGICSDIEEQ-GQC---SISLIE 175

Query: 181 NSQQSHGISIECETMSPDVPINSSSCIDEEDKDDSWMQFITDDPWCSSNSTSTTFTGDQV 240
           +SQ    I+ ECETMSPD+P  SSSC++EEDKDDSWMQFIT+D W SSN  +    G++V
Sbjct: 176 SSQT---ITNECETMSPDIPGASSSCLEEEDKDDSWMQFITEDAWYSSN--AAMVGGEEV 230

Query: 241 SHLEFTN 247
           SH+ FTN
Sbjct: 231 SHVTFTN 237

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359491819|ref|XP_002270576.2| PREDICTED: NAC domain-containing protein 74 [Vitis vinifera]

 Score =  409 bits (1050), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 202/230 (87%), Positives = 214/230 (93%), Gaps = 8/230 (3%)

Query: 1   MAPVGLPPGFRFHPTDEELVNYYLKRKINGQEIELDIIPEVDLYKCEPWELAEKSFLPSR 60
           MAPVGLPPGFRFHPTDEELVNYYLKRKI+GQEIELDIIPEVDLYKCEPWELAEKSFLPSR
Sbjct: 10  MAPVGLPPGFRFHPTDEELVNYYLKRKIHGQEIELDIIPEVDLYKCEPWELAEKSFLPSR 69

Query: 61  DPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRVTYQSRAIGMKKTLVYYRGRAPQ 120
           DPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRVT QSRAIGMKKTLVYYRGRAPQ
Sbjct: 70  DPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRVTCQSRAIGMKKTLVYYRGRAPQ 129

Query: 121 GIRTDWVMHEYRLDDKECDDISAGIQDSYALCRVFKKNGICSEMEDQHGQCSGLSSSLME 180
           GIRTDWVMHEYRLDDKEC++ S GIQDSYALCRVFKKNGICSE E+Q GQC   SSSL+E
Sbjct: 130 GIRTDWVMHEYRLDDKECEETS-GIQDSYALCRVFKKNGICSESEEQ-GQC---SSSLIE 184

Query: 181 NSQQSHGISIECETMSPDVPINSSSCIDEEDKDDSWMQFITDDPWCSSNS 230
           +SQ   G+  + ETMSPDVP+ SSSC++EEDKDDSWMQFITDD WCSSN+
Sbjct: 185 SSQ---GVLNDYETMSPDVPLPSSSCMEEEDKDDSWMQFITDDAWCSSNT 231

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296088017|emb|CBI35300.3| unnamed protein product [Vitis vinifera]

 Score =  407 bits (1047), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 202/230 (87%), Positives = 214/230 (93%), Gaps = 8/230 (3%)

Query: 1   MAPVGLPPGFRFHPTDEELVNYYLKRKINGQEIELDIIPEVDLYKCEPWELAEKSFLPSR 60
           MAPVGLPPGFRFHPTDEELVNYYLKRKI+GQEIELDIIPEVDLYKCEPWELAEKSFLPSR
Sbjct: 1   MAPVGLPPGFRFHPTDEELVNYYLKRKIHGQEIELDIIPEVDLYKCEPWELAEKSFLPSR 60

Query: 61  DPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRVTYQSRAIGMKKTLVYYRGRAPQ 120
           DPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRVT QSRAIGMKKTLVYYRGRAPQ
Sbjct: 61  DPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRVTCQSRAIGMKKTLVYYRGRAPQ 120

Query: 121 GIRTDWVMHEYRLDDKECDDISAGIQDSYALCRVFKKNGICSEMEDQHGQCSGLSSSLME 180
           GIRTDWVMHEYRLDDKEC++ S GIQDSYALCRVFKKNGICSE E+Q GQC   SSSL+E
Sbjct: 121 GIRTDWVMHEYRLDDKECEETS-GIQDSYALCRVFKKNGICSESEEQ-GQC---SSSLIE 175

Query: 181 NSQQSHGISIECETMSPDVPINSSSCIDEEDKDDSWMQFITDDPWCSSNS 230
           +SQ   G+  + ETMSPDVP+ SSSC++EEDKDDSWMQFITDD WCSSN+
Sbjct: 176 SSQ---GVLNDYETMSPDVPLPSSSCMEEEDKDDSWMQFITDDAWCSSNT 222

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356531066|ref|XP_003534099.1| PREDICTED: NAC domain-containing protein 74-like [Glycine max]

 Score =  405 bits (1042), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 200/247 (80%), Positives = 220/247 (89%), Gaps = 10/247 (4%)

Query: 1   MAPVGLPPGFRFHPTDEELVNYYLKRKINGQEIELDIIPEVDLYKCEPWELAEKSFLPSR 60
           M+PVGLPPGFRFHPTDEELVNYYLKRKINGQEIELDIIPEVDLYKCEPWELAEKSFLPSR
Sbjct: 1   MSPVGLPPGFRFHPTDEELVNYYLKRKINGQEIELDIIPEVDLYKCEPWELAEKSFLPSR 60

Query: 61  DPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRVTYQSRAIGMKKTLVYYRGRAPQ 120
           DPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRV+ QSR IGMKKTLVYYRGRAPQ
Sbjct: 61  DPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRVSCQSRPIGMKKTLVYYRGRAPQ 120

Query: 121 GIRTDWVMHEYRLDDKECDDISAGIQDSYALCRVFKKNGICSEMEDQHGQCSGLSSSLME 180
           GIRTDWVMHEYRLDDKEC+D + G+QD+YALCRVFKKNGICS++E+Q GQC   + SL+E
Sbjct: 121 GIRTDWVMHEYRLDDKECED-TTGLQDTYALCRVFKKNGICSDIEEQ-GQC---NISLIE 175

Query: 181 NSQQSHGISIECETMSPDVPINSSSCIDEEDKDDSWMQFITDDPWCSSNSTSTTFTGDQV 240
           +SQ    I  ECETMSPD+P  SSSC++EEDKDDSWMQFIT+D W SSN  +     ++V
Sbjct: 176 SSQT---IINECETMSPDIPGASSSCLEEEDKDDSWMQFITEDAWYSSN--AAMVGSEEV 230

Query: 241 SHLEFTN 247
           SH+ FTN
Sbjct: 231 SHVTFTN 237

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449439243|ref|XP_004137396.1| PREDICTED: NAC domain-containing protein 74-like [Cucumis sativus]

 Score =  399 bits (1025), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 199/251 (79%), Positives = 221/251 (88%), Gaps = 7/251 (2%)

Query: 1   MAPVGLPPGFRFHPTDEELVNYYLKRKINGQEIELDIIPEVDLYKCEPWELAEKSFLPSR 60
           MAPVGLPPGFRFHPTDEELVNYYLKRKI+GQEIELDIIPEVDLYKCEPWEL+EKSFLPSR
Sbjct: 1   MAPVGLPPGFRFHPTDEELVNYYLKRKISGQEIELDIIPEVDLYKCEPWELSEKSFLPSR 60

Query: 61  DPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRVTYQSRAIGMKKTLVYYRGRAPQ 120
           DPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRV+ Q+RAIGMKKTLVYYRGRAPQ
Sbjct: 61  DPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRVSSQNRAIGMKKTLVYYRGRAPQ 120

Query: 121 GIRTDWVMHEYRLDDKECDDISAGIQDSYALCRVFKKNGICSEMED--QHGQCSGLSSSL 178
           GIRTDWVMHEYRLDDK+C+D S+GIQDSYALCRVFKKNGICSE+E+    GQ S  S S 
Sbjct: 121 GIRTDWVMHEYRLDDKDCED-SSGIQDSYALCRVFKKNGICSEVEEILVGGQSSSSSLSF 179

Query: 179 MENSQQ-SHGISIECETMSPDVPI-NSSSCIDEEDKDDSWMQFITDDPWCSSNSTSTTFT 236
           MENS   S  +  + ET+SPD+ +  SSSC++EE+KDDSWMQFIT+D WC+SNS++    
Sbjct: 180 MENSNSTSQTLVNDYETLSPDILMAASSSCVEEEEKDDSWMQFITEDAWCASNSSAIGL- 238

Query: 237 GDQVSHLEFTN 247
            D +SHL FTN
Sbjct: 239 -DDLSHLTFTN 248

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224120448|ref|XP_002318332.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|222859005|gb|EEE96552.1| NAC domain protein, IPR003441 [Populus trichocarpa]

 Score =  399 bits (1024), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 199/232 (85%), Positives = 211/232 (90%), Gaps = 6/232 (2%)

Query: 1   MAPVGLPPGFRFHPTDEELVNYYLKRKINGQEIELDIIPEVDLYKCEPWELAEKSFLPSR 60
           MAPVGLPPGFRFHPTDEELVNYYLKRKINGQEI+LDIIPE+DLYKCEPW+LAEKSFLPSR
Sbjct: 1   MAPVGLPPGFRFHPTDEELVNYYLKRKINGQEIDLDIIPEIDLYKCEPWDLAEKSFLPSR 60

Query: 61  DPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRVTYQSRAIGMKKTLVYYRGRAPQ 120
           DPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRV  Q+RAIGMKKTLVYYRGRAPQ
Sbjct: 61  DPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRVNCQNRAIGMKKTLVYYRGRAPQ 120

Query: 121 GIRTDWVMHEYRLDDKECDDISAGIQDSYALCRVFKKNGICSEMEDQHGQCSGLSSSLME 180
           GIRTDWVMHEYRLDDKEC+D S GIQDSYALCRVFKKNGICSE+E+Q GQC+   S    
Sbjct: 121 GIRTDWVMHEYRLDDKECEDTS-GIQDSYALCRVFKKNGICSEIEEQ-GQCTTSLSLTES 178

Query: 181 NSQQSHGISIECETMSPDVPINSSSCIDEEDKDDSWMQFITDDPW-CSSNST 231
           +SQ   G+  E ETMSPDVPI SSSCI+EEDKDDSWMQFITDDPW CSSN+ 
Sbjct: 179 SSQ---GVLNEYETMSPDVPIASSSCIEEEDKDDSWMQFITDDPWYCSSNNA 227

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15229511|ref|NP_188400.1| NAC domain containing protein 57 [Arabidopsis thaliana] gi|9294586|dbj|BAB02867.1| unnamed protein product [Arabidopsis thaliana] gi|67633638|gb|AAY78743.1| no apical meristem family protein [Arabidopsis thaliana] gi|332642479|gb|AEE76000.1| NAC domain containing protein 57 [Arabidopsis thaliana]

 Score =  377 bits (968), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 191/247 (77%), Positives = 214/247 (86%), Gaps = 9/247 (3%)

Query: 1   MAPVGLPPGFRFHPTDEELVNYYLKRKINGQEIELDIIPEVDLYKCEPWELAEKSFLPSR 60
           MAPVGLPPGFRFHPTDEELVNYYLKRKINGQEIELDIIPEVDLYKCEPW+LAEKSFLPSR
Sbjct: 1   MAPVGLPPGFRFHPTDEELVNYYLKRKINGQEIELDIIPEVDLYKCEPWDLAEKSFLPSR 60

Query: 61  DPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRVTYQSRAIGMKKTLVYYRGRAPQ 120
           DPEWYFFGPRDRKYPNGFRTNRATR GYWKSTGKDRRVT QSRAIGMKKTLVYY+GRAPQ
Sbjct: 61  DPEWYFFGPRDRKYPNGFRTNRATRGGYWKSTGKDRRVTSQSRAIGMKKTLVYYKGRAPQ 120

Query: 121 GIRTDWVMHEYRLDDKECDDISAGIQDSYALCRVFKKNGICSEMED----QHGQCSGLSS 176
           GIRTDWVMHEYRLDDK+CDD S+ +QDSYALCRVFKKNGICSE+E     Q GQCS  ++
Sbjct: 121 GIRTDWVMHEYRLDDKDCDDPSS-LQDSYALCRVFKKNGICSELESERQLQTGQCSFTTA 179

Query: 177 SLME-NSQQSHGISIECETMSPDVPINSSSCIDE--EDKDDSWMQFITDDPWCSSNSTST 233
           S+ E NS  ++  + + ETMSP+V + SS+C++E  +DKDDSWMQFITDD W +S++ + 
Sbjct: 180 SMEEINSNNNNNYNNDYETMSPEVGV-SSACVEEVVDDKDDSWMQFITDDAWDTSSNGAA 238

Query: 234 TFTGDQV 240
              G  V
Sbjct: 239 MGHGQGV 245

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297830402|ref|XP_002883083.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297328923|gb|EFH59342.1| predicted protein [Arabidopsis lyrata subsp. lyrata]

 Score =  373 bits (957), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 191/247 (77%), Positives = 213/247 (86%), Gaps = 9/247 (3%)

Query: 1   MAPVGLPPGFRFHPTDEELVNYYLKRKINGQEIELDIIPEVDLYKCEPWELAEKSFLPSR 60
           MAPVGLPPGFRFHPTDEELVNYYLKRKINGQEIELDIIPEVDLYKCEPW+LAEKSFLPSR
Sbjct: 1   MAPVGLPPGFRFHPTDEELVNYYLKRKINGQEIELDIIPEVDLYKCEPWDLAEKSFLPSR 60

Query: 61  DPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRVTYQSRAIGMKKTLVYYRGRAPQ 120
           DPEWYFFGPRDRKYPNGFRTNRATR GYWKSTGKDRRVT QSRAIGMKKTLVYY+GRAPQ
Sbjct: 61  DPEWYFFGPRDRKYPNGFRTNRATRGGYWKSTGKDRRVTSQSRAIGMKKTLVYYKGRAPQ 120

Query: 121 GIRTDWVMHEYRLDDKECDDISAGIQDSYALCRVFKKNGICSEMED----QHGQCSGLSS 176
           GIRTDWVMHEYRLDDK+CDD S+ +QDSYALCRVFKKNGICSE+E     Q GQCS  ++
Sbjct: 121 GIRTDWVMHEYRLDDKDCDDPSS-LQDSYALCRVFKKNGICSELESERQLQTGQCSFTTA 179

Query: 177 SL-MENSQQSHGISIECETMSPDVPINSSSCIDE--EDKDDSWMQFITDDPWCSSNSTST 233
           S+   NS  ++  + E ETMSP+V + SS+C++E  +DKDDSWMQFITDD W +S++ + 
Sbjct: 180 SMEEINSNNNNNYNNEYETMSPEVGV-SSACVEEVVDDKDDSWMQFITDDAWDTSSNGAA 238

Query: 234 TFTGDQV 240
              G  V
Sbjct: 239 MGHGQGV 245

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	247
TAIR|locus:2089764	246	NAC057 "NAC domain containing	0.931	0.934	0.795	6.9e-102
TAIR|locus:2167155	476	NAC086 "NAC domain containing	0.894	0.464	0.605	7.5e-76
TAIR|locus:2097720	479	NAC045 "NAC domain containing	0.793	0.409	0.673	1.6e-73
TAIR|locus:2009729	631	NAC028 "NAC domain containing	0.898	0.351	0.603	7.5e-73
TAIR|locus:2020123	301	NAC020 "NAC domain containing	0.623	0.511	0.734	8.8e-63
TAIR|locus:2142285	292	NAC096 "NAC domain containing	0.951	0.804	0.480	2.8e-57
TAIR|locus:2141075	262	NAC071 "NAC domain containing	0.813	0.767	0.533	5.5e-54
TAIR|locus:2075815	549	NAC053 "AT3G10500" [Arabidopsi	0.655	0.295	0.587	1.6e-53
TAIR|locus:2184342	567	NAC2 "NAC domain containing pr	0.910	0.396	0.450	4.4e-52
TAIR|locus:2033745	283	NAC011 "NAC domain containing	0.923	0.805	0.473	1.7e-50

TAIR|locus:2089764 NAC057 "NAC domain containing protein 57" [Arabidopsis thaliana (taxid:3702)]

 Score = 1010 (360.6 bits), Expect = 6.9e-102, P = 6.9e-102
 Identities = 191/240 (79%), Positives = 211/240 (87%)

Query:     1 MAPVGLPPGFRFHPTDEELVNYYLKRKINGQEIELDIIPEVDLYKCEPWELAEKSFLPSR 60
             MAPVGLPPGFRFHPTDEELVNYYLKRKINGQEIELDIIPEVDLYKCEPW+LAEKSFLPSR
Sbjct:     1 MAPVGLPPGFRFHPTDEELVNYYLKRKINGQEIELDIIPEVDLYKCEPWDLAEKSFLPSR 60

Query:    61 DPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRVTYQSRAIGMKKTLVYYRGRAPQ 120
             DPEWYFFGPRDRKYPNGFRTNRATR GYWKSTGKDRRVT QSRAIGMKKTLVYY+GRAPQ
Sbjct:    61 DPEWYFFGPRDRKYPNGFRTNRATRGGYWKSTGKDRRVTSQSRAIGMKKTLVYYKGRAPQ 120

Query:   121 GIRTDWVMHEYRLDDKECDDISAGIQDSYALCRVFKKNGICSEMED----QHGQCSGLSS 176
             GIRTDWVMHEYRLDDK+CDD S+ +QDSYALCRVFKKNGICSE+E     Q GQCS  ++
Sbjct:   121 GIRTDWVMHEYRLDDKDCDDPSS-LQDSYALCRVFKKNGICSELESERQLQTGQCSFTTA 179

Query:   177 SLME-NSQQSHGISIECETMSPDVPINSSSCIDE--EDKDDSWMQFITDDPW-CSSNSTS 232
             S+ E NS  ++  + + ETMSP+V + SS+C++E  +DKDDSWMQFITDD W  SSN  +
Sbjct:   180 SMEEINSNNNNNYNNDYETMSPEVGV-SSACVEEVVDDKDDSWMQFITDDAWDTSSNGAA 238

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2167155 NAC086 "NAC domain containing protein 86" [Arabidopsis thaliana (taxid:3702)]

 Score = 735 (263.8 bits), Expect = 7.5e-76, Sum P(2) = 7.5e-76
 Identities = 141/233 (60%), Positives = 169/233 (72%)

Query:     1 MAPVGLPPGFRFHPTDEELVNYYLKRKINGQEIELDIIPEVDLYKCEPWELAEKSFLPSR 60
             MAPV LPPGFRFHPTDEEL+ YYLKRKINGQEIEL+IIPEVDLYKCEPW+L  KS +PS+
Sbjct:     1 MAPVSLPPGFRFHPTDEELITYYLKRKINGQEIELEIIPEVDLYKCEPWDLPGKSLIPSK 60

Query:    61 DPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRVTYQSRAIGMKKTLVYYRGRAPQ 120
             D EW+FF PRDRKYPNG RTNRAT+ GYWK+TGKDRRV+++ RAIG KKTLVYYRGRAP 
Sbjct:    61 DQEWFFFSPRDRKYPNGSRTNRATKGGYWKATGKDRRVSWRDRAIGTKKTLVYYRGRAPH 120

Query:   121 GIRTDWVMHEYRLDDKECDDISAGIQDSYALCRVFKKNGICSEMEDQHGQCSGLSSSLME 180
             GIRT WVMHEYRLD+ EC+  + G+QD+YALCRVFKK  I ++  DQH Q          
Sbjct:   121 GIRTGWVMHEYRLDESECEPSAFGMQDAYALCRVFKKIVIEAKPRDQHQQQHQPYVHTSS 180

Query:   181 NSQQSHGISIECETM--SPDVPINSSSCIDEE--------DKDDSWMQFITDD 223
             N   S    + C  +  S + P N+++ I           D DD W Q+++ +
Sbjct:   181 NISGSSSFDV-CSDLEISSNTPYNTAAHIQPRFGNANAISDHDD-WSQYLSQN 231

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2097720 NAC045 "NAC domain containing protein 45" [Arabidopsis thaliana (taxid:3702)]

 Score = 717 (257.5 bits), Expect = 1.6e-73, Sum P(2) = 1.6e-73
 Identities = 132/196 (67%), Positives = 152/196 (77%)

Query:     1 MAPVGLPPGFRFHPTDEELVNYYLKRKINGQEIELDIIPEVDLYKCEPWELAEKSFLPSR 60
             MAPV LPPGFRFHPTDEEL+ YYLKRKING EIEL++I EVDLYKCEPW+L  KS LPS+
Sbjct:     1 MAPVSLPPGFRFHPTDEELITYYLKRKINGLEIELEVIAEVDLYKCEPWDLPGKSLLPSK 60

Query:    61 DPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRVTYQSRAIGMKKTLVYYRGRAPQ 120
             D EWYFF PRDRKYPNG RTNRAT+ GYWK+TGKDRRV+++ RAIG KKTLVYYRGRAP 
Sbjct:    61 DQEWYFFSPRDRKYPNGSRTNRATKGGYWKATGKDRRVSWRDRAIGTKKTLVYYRGRAPH 120

Query:   121 GIRTDWVMHEYRLDDKECDDISAGIQDSYALCRVFKKNGICSEMEDQHGQCSGLSSSLME 180
             GIRT WVMHEYRLD+ EC+  + G+QD+YALCRVFKK  I ++  DQH       S++  
Sbjct:   121 GIRTGWVMHEYRLDETECEPSAYGMQDAYALCRVFKKIVIEAKPRDQHRSYVHAMSNVSG 180

Query:   181 NSQQSHGISIECETMS 196
             N   S     + E  S
Sbjct:   181 NCSSSFDTCSDLEISS 196

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2009729 NAC028 "NAC domain containing protein 28" [Arabidopsis thaliana (taxid:3702)]

 Score = 736 (264.1 bits), Expect = 7.5e-73, P = 7.5e-73
 Identities = 143/237 (60%), Positives = 177/237 (74%)

Query:     1 MAPVGLPPGFRFHPTDEELVNYYLKRKINGQEIELDIIPEVDLYKCEPWELAEKSFLPSR 60
             MAPV +PPGFRFHPTDEELV YYLKRKING+ IEL+IIPE+DLYKCEPW+L  KS LPS+
Sbjct:     1 MAPVSMPPGFRFHPTDEELVIYYLKRKINGRTIELEIIPEIDLYKCEPWDLPGKSLLPSK 60

Query:    61 DPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRVTYQSRAIGMKKTLVYYRGRAPQ 120
             D EW+FF PRDRKYPNG RTNRAT+AGYWK+TGKDR+VT  SR +G KKTLVYYRGRAP 
Sbjct:    61 DLEWFFFSPRDRKYPNGSRTNRATKAGYWKATGKDRKVTSHSRMVGTKKTLVYYRGRAPH 120

Query:   121 GIRTDWVMHEYRLDDKECDDISAGIQDSYALCRVFKKNGICSEMEDQH-G--QCSGLSSS 177
             G RTDWVMHEYRL+++ECD  S GIQD+YALCRVFKK+ + +++E+QH G  +  G ++S
Sbjct:   121 GSRTDWVMHEYRLEEQECDSKS-GIQDAYALCRVFKKSALANKIEEQHHGTKKNKGTTNS 179

Query:   178 LMENSQQ---SHGISIECET----MSPDV----PINSSSCIDEEDKDDSWMQFITDD 223
                 S     S G+    E     +SP+      + ++S  D E  ++ W QF++ D
Sbjct:   180 EQSTSSTCLYSDGMYENLENSGYPVSPETGGLTQLGNNSSSDMETIENKWSQFMSHD 236

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2020123 NAC020 "NAC domain containing protein 20" [Arabidopsis thaliana (taxid:3702)]

 Score = 641 (230.7 bits), Expect = 8.8e-63, P = 8.8e-63
 Identities = 116/158 (73%), Positives = 131/158 (82%)

Query:     1 MAPVGLPPGFRFHPTDEELVNYYLKRKINGQEIELDIIPEVDLYKCEPWELAEKSFLPSR 60
             MAP+ LPPGFRFHPTDEELV YYL RK+NGQ IEL+IIPEVDLYKCEPW+L EKSFLP  
Sbjct:     1 MAPMSLPPGFRFHPTDEELVAYYLDRKVNGQAIELEIIPEVDLYKCEPWDLPEKSFLPGN 60

Query:    61 DPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRVTYQSRAIGMKKTLVYYRGRAPQ 120
             D EWYF+  RD+KYPNG RTNRATRAGYWK+TGKDR V  +   +GMKKTLVYYRGRAP 
Sbjct:    61 DMEWYFYSTRDKKYPNGSRTNRATRAGYWKATGKDRTVESKKMKMGMKKTLVYYRGRAPH 120

Query:   121 GIRTDWVMHEYRLDDKECDDISAGIQDSYALCRVFKKN 158
             G+RT+WVMHEYRL        S+ +++SYALCRVFKKN
Sbjct:   121 GLRTNWVMHEYRLTHAP----SSSLKESYALCRVFKKN 154

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2142285 NAC096 "NAC domain containing protein 96" [Arabidopsis thaliana (taxid:3702)]

 Score = 589 (212.4 bits), Expect = 2.8e-57, P = 2.8e-57
 Identities = 123/256 (48%), Positives = 163/256 (63%)

Query:     6 LPPGFRFHPTDEELVNYYLKRKINGQEIELDIIPEVDLYKCEPWELAEKSFLPSRDPEWY 65
             LPPGFRFHPTDEEL+ YYLKRK+ G EIEL++IP +DLY  +PWEL +KSFLP+RD EWY
Sbjct:     6 LPPGFRFHPTDEELIEYYLKRKVEGLEIELEVIPVIDLYSFDPWELPDKSFLPNRDMEWY 65

Query:    66 FFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRVTYQSRAI-GMKKTLVYYRGRAPQGIRT 124
             FF  RD+KYPNGFRTNR T+AGYWK+TGKDR++T +S +I G +KTLV+Y+GRAP G R+
Sbjct:    66 FFCSRDKKYPNGFRTNRGTKAGYWKATGKDRKITSRSSSIIGYRKTLVFYKGRAPLGDRS 125

Query:   125 DWVMHEYRLDDKECDDISAGIQDSYALCRVFKKNGIC---------SEMEDQHGQCSGLS 175
             +W+MHEYRL D +    S  ++ ++ LCRV  KN I          SE     G+ SGLS
Sbjct:   126 NWIMHEYRLCDDDTSQGSQNLKGAFVLCRVAMKNEIKTNTKIRKIPSEQTIGSGESSGLS 185

Query:   176 SSLMENSQQS----HGIS--IECETMSPDVPINSSSCIDEEDKDDSWMQFITDDPWCSSN 229
             S +   S+      H  +  +  ET S ++ I+    +D   KD   +Q +     C   
Sbjct:   186 SRVTSPSRDETMPFHSFANPVSTETDSSNIWISPEFILDSS-KDYPQIQDVASQ--CFQQ 242

Query:   230 STSTTFTGDQVSHLEF 245
                    G+Q  ++EF
Sbjct:   243 DFDFPIIGNQ--NMEF 256

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2141075 NAC071 "NAC domain containing protein 71" [Arabidopsis thaliana (taxid:3702)]

 Score = 558 (201.5 bits), Expect = 5.5e-54, P = 5.5e-54
 Identities = 111/208 (53%), Positives = 142/208 (68%)

Query:     6 LPPGFRFHPTDEELVNYYLKRKINGQEIELDIIPEVDLYKCEPWELAEKSFLPSRDPEWY 65
             LPPGFRFHPTDEEL+ YYL RKI G EIEL++IP +DLYK +PWEL  KSFLP+RD EW+
Sbjct:     6 LPPGFRFHPTDEELIGYYLSRKIEGLEIELEVIPVIDLYKFDPWELPGKSFLPNRDLEWF 65

Query:    66 FFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRVTYQSRAI--GMKKTLVYYRGRAPQGIR 123
             FF PRD+KY NG RTNRAT+AGYWK+TGKDR++T +S  +  G +KTLV+Y GRAP G R
Sbjct:    66 FFCPRDKKYANGSRTNRATKAGYWKATGKDRKITCKSSHVIAGYRKTLVFYEGRAPLGDR 125

Query:   124 TDWVMHEYRLDD-KECDDISAGIQDSYALCRVFKKNGI---CSEMEDQHGQCSGLSSSLM 179
             T+W MHEYRL D  +    S   + ++ALCRV KKN +      +++++ Q  G   S +
Sbjct:   126 TNWFMHEYRLCDIDDHSQKSPNFKGAFALCRVVKKNELKKNSKSLKNKNEQDIGSCYSSL 185

Query:   180 ENSQQSHGISIECETMSPDVPINSSSCI 207
               S      S + ++  P    N SS I
Sbjct:   186 ATSPCRDEAS-QIQSFKPSSTTNDSSSI 212

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2075815 NAC053 "AT3G10500" [Arabidopsis thaliana (taxid:3702)]

 Score = 528 (190.9 bits), Expect = 1.6e-53, Sum P(2) = 1.6e-53
 Identities = 97/165 (58%), Positives = 123/165 (74%)

Query:     6 LPPGFRFHPTDEELVNYYLKRKINGQEIELDIIPEVDLYKCEPWELAEKSFLPSRDPEWY 65
             L PGFRFHPTDEELV YYLKRKI  +  + D I   D+YK EPW+L +KS L SRD EWY
Sbjct:     9 LAPGFRFHPTDEELVRYYLKRKICNKPFKFDAISVTDVYKSEPWDLPDKSRLKSRDLEWY 68

Query:    66 FFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRVTYQSRAIGMKKTLVYYRGRAPQGIRTD 125
             FF   D+KY NG +TNRAT  GYWK+TGKDR +   S+ +GMKKTLVY++GRAP+G RT+
Sbjct:    69 FFSMLDKKYRNGSKTNRATEMGYWKTTGKDREILNGSKVVGMKKTLVYHKGRAPRGERTN 128

Query:   126 WVMHEYRLDDKECDDISAGI-QDSYALCRVFKKNGICSEMEDQHG 169
             WVMHEYRL D++ D    G+ QD++ LCR+F+K+G   +  +Q+G
Sbjct:   129 WVMHEYRLVDQDLD--KTGVHQDAFVLCRIFQKSGSGPKNGEQYG 171

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0009819 "drought recovery" evidence=IMP

GO:0010150 "leaf senescence" evidence=IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

GO:2000377 "regulation of reactive oxygen species metabolic process" evidence=IMP

GO:0009407 "toxin catabolic process" evidence=RCA

GO:0010583 "response to cyclopentenone" evidence=RCA

TAIR|locus:2184342 NAC2 "NAC domain containing protein 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 540 (195.1 bits), Expect = 4.4e-52, P = 4.4e-52
 Identities = 109/242 (45%), Positives = 152/242 (62%)

Query:     6 LPPGFRFHPTDEELVNYYLKRKINGQEIELDIIPEVDLYKCEPWELAEKSFLPSRDPEWY 65
             L PGFRFHPTDEELV YYLKRK+  +  + D I   D+YK EPW+L +KS L SRD EWY
Sbjct:     9 LAPGFRFHPTDEELVRYYLKRKVCNKPFKFDAISVTDIYKSEPWDLPDKSKLKSRDLEWY 68

Query:    66 FFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRVTYQSRAIGMKKTLVYYRGRAPQGIRTD 125
             FF   D+KY NG +TNRAT  GYWK+TGKDR +   SR +GMKKTLVY++GRAP+G RT+
Sbjct:    69 FFSMLDKKYSNGSKTNRATEKGYWKTTGKDREIRNGSRVVGMKKTLVYHKGRAPRGERTN 128

Query:   126 WVMHEYRLDDKECDDISAGI-QDSYALCRVFKKNGICSEMEDQHGQCSGLSSSLMENSQQ 184
             WVMHEYRL D++     AG+ Q++Y LCR+F+K+G   +  +Q+G      +  +E   +
Sbjct:   129 WVMHEYRLSDEDLK--KAGVPQEAYVLCRIFQKSGTGPKNGEQYG------APYLEEEWE 180

Query:   185 SHGISI--ECETMSPDVPINSSSCIDEEDKDDSWMQFITDD--P----WCSSNSTSTTFT 236
               G++     +  S  + +N    +D +D D+     +  D  P    +C   S++   +
Sbjct:   181 EDGMTYVPAQDAFSEGLALNDDVYVDIDDIDEKPENLVVYDAVPILPNYCHGESSNNVES 240

Query:   237 GD 238
             G+
Sbjct:   241 GN 242

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=IDA

GO:0009644 "response to high light intensity" evidence=IEP

GO:0009962 "regulation of flavonoid biosynthetic process" evidence=IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

TAIR|locus:2033745 NAC011 "NAC domain containing protein 11" [Arabidopsis thaliana (taxid:3702)]

 Score = 525 (189.9 bits), Expect = 1.7e-50, P = 1.7e-50
 Identities = 118/249 (47%), Positives = 154/249 (61%)

Query:     6 LPPGFRFHPTDEELVNYYLKRKINGQEIELDIIPEVDLYKCEPWELAEKSFLPSRDPEWY 65
             LPPGFRF+PTDEELV YYL R+  G EIEL+IIP +DLYK +PWEL EKSFLP+RD EW+
Sbjct:     6 LPPGFRFYPTDEELVGYYLHRRNEGLEIELEIIPLMDLYKFDPWELPEKSFLPNRDMEWF 65

Query:    66 FFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRVTYQSRA-------IGMKKTLVYYRGRA 118
             FF  RDRKY NG R NRAT++GYWK+TGKDR++   S +        G +KTLV+Y GRA
Sbjct:    66 FFCHRDRKYQNGSRINRATKSGYWKATGKDRKIVCHSSSSSSSSSITGCRKTLVFYMGRA 125

Query:   119 PQGIRTDWVMHEYRLDDKECDDISAGIQDSYALCRVFKKNGICSEMEDQHGQCSGLSSSL 178
             P G RT+WVMHEYRL D +    S   +  +ALCRV K+N      E    +C  +S  +
Sbjct:   126 PFGGRTEWVMHEYRLFDNDTSQGSLNFKGDFALCRVIKRN------EHTLKKCEIISPEV 179

Query:   179 MENSQQSHGISIECETMSPDVPINSSSCIDEEDKDDSWMQFITDDPWC-SSNSTSTTFTG 237
              + S  S+ ++  C+       +   SC D  +   S   FI +  +  +S+S +   +G
Sbjct:   180 SDESL-SNNVNNFCQASD----LEKGSC-DASNTRLSSPDFILESSFQGNSHSKTEEDSG 233

Query:   238 DQVSHL-EF 245
              QV  L EF
Sbjct:   234 FQVFTLPEF 242

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;TAS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	247
pfam02365	130	pfam02365, NAM, No apical meristem (NAM) protein	6e-80

>gnl|CDD|216997 pfam02365, NAM, No apical meristem (NAM) protein

 Score =  235 bits (603), Expect = 6e-80
 Identities = 88/131 (67%), Positives = 105/131 (80%), Gaps = 3/131 (2%)

Query: 6   LPPGFRFHPTDEELVNYYLKRKINGQEIEL-DIIPEVDLYKCEPWELAEKSFLPSRDPEW 64
           LPPGFRFHPTDEELV YYLKRK+ G+ + L D+IPEVD+YK EPW+L +       D EW
Sbjct: 1   LPPGFRFHPTDEELVVYYLKRKVLGKPLPLLDVIPEVDIYKFEPWDLPD-GKAKGGDREW 59

Query: 65  YFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRVTYQ-SRAIGMKKTLVYYRGRAPQGIR 123
           YFF PRDRKYPNG RTNRAT +GYWK+TGKD+ V  +    +GMKKTLV+Y+GRAP+G +
Sbjct: 60  YFFSPRDRKYPNGSRTNRATGSGYWKATGKDKPVLSKGGEVVGMKKTLVFYKGRAPKGEK 119

Query: 124 TDWVMHEYRLD 134
           TDWVMHEYRL+
Sbjct: 120 TDWVMHEYRLE 130

This is a family of no apical meristem (NAM) proteins these are plant development proteins. Mutations in NAM result in the failure to develop a shoot apical meristem in petunia embryos. NAM is indicated as having a role in determining positions of meristems and primordial. One member of this family NAP (NAC-like, activated by AP3/PI) is encoded by the target genes of the AP3/PI transcriptional activators and functions in the transition between growth by cell division and cell expansion in stamens and petals. Length = 130

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	247
PF02365	129	NAM: No apical meristem (NAM) protein; InterPro: I	100.0

>PF02365 NAM: No apical meristem (NAM) protein; InterPro: IPR003441 The NAC domain (for Petunia hybrida (Petunia) NAM and for Arabidopsis ATAF1, ATAF2, and CUC2) is an N-terminal module of ~160 amino acids, which is found in proteins of the NAC family of plant-specific transcriptional regulators (no apical meristem (NAM) proteins) []

Probab=100.00  E-value=8.7e-45  Score=292.53  Aligned_cols=127  Identities=57%  Similarity=1.145  Sum_probs=97.0

Q ss_pred             CCCCceeCCChHHHHHHHHHhhHcCCCCCc-CceeecCCCCCCcccchhhcCCCCCCCceEEeccccccCCCCCcccccc
Q 040617            6 LPPGFRFHPTDEELVNYYLKRKINGQEIEL-DIIPEVDLYKCEPWELAEKSFLPSRDPEWYFFGPRDRKYPNGFRTNRAT   84 (247)
Q Consensus         6 LPpGfrF~PTDeELI~~YL~~Ki~g~~l~~-~~I~evDvy~~~PwdL~~~~~~~~~d~~wYFFt~r~~k~~~g~R~~R~t   84 (247)
                      |||||||+|||+|||.+||++|+.|.+++. .+|+++|||++|||+|++.  ...++.+||||+++++++.++.|.+|++
T Consensus         1 LP~G~rF~PtD~ELi~~yL~~k~~g~~~~~~~~i~~~Diy~~~P~~L~~~--~~~~~~~~yFF~~~~~~~~~~~r~~R~~   78 (129)
T PF02365_consen    1 LPPGFRFRPTDEELINHYLRPKILGEPLPCEDVIHDVDIYSAHPWELPAK--FKGGDEEWYFFSPRKKKYPNGGRPNRVT   78 (129)
T ss_dssp             --TTEEE---HHHHHHCTHHHHHTT-HHCS-CHSEE--GGGS-GGGCHHH--SSS-SSEEEEEEE----------S-EEE
T ss_pred             CCCceEecCChHHHHHHHHHHHhcCCCCCcccceeecccCccChHHhhhh--ccCCCceEEEEEecccccCCcccccccc
Confidence            899999999999999999999999999887 7899999999999999953  2346679999999999999999999999


Q ss_pred             ccceeeecCCceeEee-cCceeeEEEEEEeecCCCCCCCCcCeEEEEEEeC
Q 040617           85 RAGYWKSTGKDRRVTY-QSRAIGMKKTLVYYRGRAPQGIRTDWVMHEYRLD  134 (247)
Q Consensus        85 ~gG~Wk~~G~~~~I~~-~g~~iG~Krtl~Fy~g~~~~g~rT~WvM~EY~l~  134 (247)
                      ++|+||.+|+.++|.+ ++.+||+|++|+||.++.+++.+|+|+||||+|.
T Consensus        79 ~~G~Wk~~g~~~~i~~~~g~~iG~k~~l~f~~~~~~~~~kt~W~M~EY~L~  129 (129)
T PF02365_consen   79 GGGYWKSTGKEKPIKDPGGKVIGFKKTLVFYSGKSPNGKKTGWVMHEYSLE  129 (129)
T ss_dssp             TTEEEEEECEEEEEEE-TTCEEEEEEEEEEEESSTTS-EEEEEEEEEEEE-
T ss_pred             cceEEeecccccccccccceeeeeEEEEEEEeccCCCCCcCCeEEEEEEeC
Confidence            9999999999999998 8999999999999998888899999999999984

NAC proteins are involved in developmental processes, including formation of the shoot apical meristem, floral organs and lateral shoots, as well as in plant hormonal control and defence. The NAC domain is accompanied by diverse C-terminal transcriptional activation domains. The NAC domain has been shown to be a DNA-binding domain (DBD) and a dimerization domain [,]. The NAC domain can be subdivided into five subdomains (A-E). Each subdomain is distinguishable by blocks of heterogeneous amino acids or gaps. While the NAC domains were rich in basic amino acids (R, K and H) as a whole, the distribution of positive and negative amino acids in each subdomain were unequal. Subdomains C and D are rich in basic amino acids but poor in acidic amino acids, while subdomain B contains a high proportion of acidic amino acids. Putative nuclear localization signals (NLS) have been detected in subdomains C and D []. The DBD is contained within a 60 amino acid region located within subdomains D and E []. The overall structure of the NAC domain monomer consists of a very twisted antiparallel beta-sheet, which packs against an N-terminal alpha-helix on one side and one shorter helix on the other side surrounded by a few helical elements. The structure suggests that the NAC domain mediates dimerization through conserved interactions including a salt bridge, and DNA binding through the NAC dimer face rich in positive charges [].; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 1UT4_A 3SWM_B 4DUL_B 3SWP_D 1UT7_B 3ULX_A.

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	247
3ulx_A	174	Crystal Structural Of The Conserved Domain Of Rice		5e-45
1ut4_A	171	Structure Of The Conserved Domain Of Anac, A Member		7e-43
3swm_A	174	The Nac Domain Of Anac019 In Complex With Dna, Gold		7e-43

>pdb|3ULX|A Chain A, Crystal Structural Of The Conserved Domain Of Rice Stress-Responsive Nac1 Length = 174

Iteration: 1
 Score =  177 bits (449), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 87/161 (54%), Positives = 111/161 (68%), Gaps = 6/161 (3%)
Query: 2   APVGLPPGFRFHPTDEELVNYYLKRKINGQEIELDIIPEVDLYKCEPWELAEKSFLPSRD 61
           A + LPPGFRFHPTD+ELV +YL RK  GQ + + II EVDLYK +PW+L E++   +R 
Sbjct: 11  AELNLPPGFRFHPTDDELVEHYLCRKAAGQRLPVPIIAEVDLYKFDPWDLPERALFGAR- 69
Query: 62  PEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRVTYQSRAIGMKKTLVYYRGRAPQG 121
            EWYFF PRDRKYPNG R NRA   GYWK+TG D+ V  + R +G+KK LV+Y G+AP+G
Sbjct: 70  -EWYFFTPRDRKYPNGSRPNRAAGNGYWKATGADKPVAPRGRTLGIKKALVFYAGKAPRG 128
Query: 122 IRTDWVMHEYRLDDKECDDISAGIQ----DSYALCRVFKKN 158
           ++TDW+MHEYRL D       A       D + LCR++ K 
Sbjct: 129 VKTDWIMHEYRLADAGRAAAGAKKGSLRLDDWVLCRLYNKK 169

>pdb|1UT4|A Chain A, Structure Of The Conserved Domain Of Anac, A Member Of The Nac Family Of Transcription Factors Length = 171

Iteration: 1
 Score =  170 bits (431), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 78/158 (49%), Positives = 109/158 (68%), Gaps = 3/158 (1%)
Query: 1   MAPVGLPPGFRFHPTDEELVNYYLKRKINGQEIELDIIPEVDLYKCEPWELAEKSFLPSR 60
           +  + LPPGFRF+PTDEEL+  YL RK  G +  L +I E+DLYK +PW L  K+    +
Sbjct: 12  LTQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEK 71
Query: 61  DPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRVTYQSRAIGMKKTLVYYRGRAPQ 120
             EWYFF PRDRKYPNG R NR   +GYWK+TG D+ ++ + + +G+KK LV+Y G+AP+
Sbjct: 72  --EWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPK 129
Query: 121 GIRTDWVMHEYRLDDKECDDISAGIQDSYALCRVFKKN 158
           G +T+W+MHEYRL +    + S  + D + LCR++KK 
Sbjct: 130 GTKTNWIMHEYRLIEPSRRNGSTKL-DDWVLCRIYKKQ 166

>pdb|3SWM|A Chain A, The Nac Domain Of Anac019 In Complex With Dna, Gold Derivative Length = 174

Iteration: 1
 Score =  170 bits (430), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 78/158 (49%), Positives = 109/158 (68%), Gaps = 3/158 (1%)
Query: 1   MAPVGLPPGFRFHPTDEELVNYYLKRKINGQEIELDIIPEVDLYKCEPWELAEKSFLPSR 60
           +  + LPPGFRF+PTDEEL+  YL RK  G +  L +I E+DLYK +PW L  K+    +
Sbjct: 15  LTQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEK 74
Query: 61  DPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRVTYQSRAIGMKKTLVYYRGRAPQ 120
             EWYFF PRDRKYPNG R NR   +GYWK+TG D+ ++ + + +G+KK LV+Y G+AP+
Sbjct: 75  --EWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPK 132
Query: 121 GIRTDWVMHEYRLDDKECDDISAGIQDSYALCRVFKKN 158
           G +T+W+MHEYRL +    + S  + D + LCR++KK 
Sbjct: 133 GTKTNWIMHEYRLIEPSRRNGSTKL-DDWVLCRIYKKQ 169

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	247
1ut7_A	171	No apical meristem protein; transcription regulati	1e-104
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	1e-101

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A Length = 171

 Score =  297 bits (763), Expect = e-104
 Identities = 77/159 (48%), Positives = 108/159 (67%), Gaps = 3/159 (1%)

Query: 1   MAPVGLPPGFRFHPTDEELVNYYLKRKINGQEIELDIIPEVDLYKCEPWELAEKSFLPSR 60
           +  + LPPGFRF+PTDEEL+  YL RK  G +  L +I E+DLYK +PW L  K+     
Sbjct: 12  LTQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALF--G 69

Query: 61  DPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRVTYQSRAIGMKKTLVYYRGRAPQ 120
           + EWYFF PRDRKYPNG R NR   +GYWK+TG D+ ++ + + +G+KK LV+Y G+AP+
Sbjct: 70  EKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPK 129

Query: 121 GIRTDWVMHEYRLDDKECDDISAGIQDSYALCRVFKKNG 159
           G +T+W+MHEYRL +    +  +   D + LCR++KK  
Sbjct: 130 GTKTNWIMHEYRLIEPSRRN-GSTKLDDWVLCRIYKKQS 167

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} Length = 174

 Score =  290 bits (744), Expect = e-101
 Identities = 86/162 (53%), Positives = 111/162 (68%), Gaps = 6/162 (3%)

Query: 2   APVGLPPGFRFHPTDEELVNYYLKRKINGQEIELDIIPEVDLYKCEPWELAEKSFLPSRD 61
           A + LPPGFRFHPTD+ELV +YL RK  GQ + + II EVDLYK +PW+L E++   +R 
Sbjct: 11  AELNLPPGFRFHPTDDELVEHYLCRKAAGQRLPVPIIAEVDLYKFDPWDLPERALFGAR- 69

Query: 62  PEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRVTYQSRAIGMKKTLVYYRGRAPQG 121
            EWYFF PRDRKYPNG R NRA   GYWK+TG D+ V  + R +G+KK LV+Y G+AP+G
Sbjct: 70  -EWYFFTPRDRKYPNGSRPNRAAGNGYWKATGADKPVAPRGRTLGIKKALVFYAGKAPRG 128

Query: 122 IRTDWVMHEYRLDDKECDD----ISAGIQDSYALCRVFKKNG 159
           ++TDW+MHEYRL D           +   D + LCR++ K  
Sbjct: 129 VKTDWIMHEYRLADAGRAAAGAKKGSLRLDDWVLCRLYNKKN 170

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	247
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	100.0
1ut7_A	171	No apical meristem protein; transcription regulati	100.0

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} SCOP: b.143.1.1

Probab=100.00  E-value=1.2e-57  Score=384.00  Aligned_cols=156  Identities=54%  Similarity=1.076  Sum_probs=134.9

Q ss_pred             CCCCCCCCceeCCChHHHHHHHHHhhHcCCCCCcCceeecCCCCCCcccchhhcCCCCCCCceEEeccccccCCCCCccc
Q 040617            2 APVGLPPGFRFHPTDEELVNYYLKRKINGQEIELDIIPEVDLYKCEPWELAEKSFLPSRDPEWYFFGPRDRKYPNGFRTN   81 (247)
Q Consensus         2 ~p~~LPpGfrF~PTDeELI~~YL~~Ki~g~~l~~~~I~evDvy~~~PwdL~~~~~~~~~d~~wYFFt~r~~k~~~g~R~~   81 (247)
                      +++.|||||||+|||||||.|||++|+.|.+++.++|+++|||++|||+||+.+..  ++.+||||+++++++++|.|++
T Consensus        11 ~~~~LPpGfRF~PTDeELV~~YL~~K~~g~~~~~~~I~evDvy~~~Pw~Lp~~~~~--g~~ewYFFs~r~~ky~~g~R~n   88 (174)
T 3ulx_A           11 AELNLPPGFRFHPTDDELVEHYLCRKAAGQRLPVPIIAEVDLYKFDPWDLPERALF--GAREWYFFTPRDRKYPNGSRPN   88 (174)
T ss_dssp             STTTCCTTCCCCCCHHHHHHHTHHHHHHTCCCSSSCCEECCGGGSCGGGSGGGCSS--CSSEEEEEEECCC-----CCSC
T ss_pred             cccCCCCcceeCCCHHHHHHHHHHHHhcCCCCCcCeeeecccccCCchhhhhhhcc--CCceEEEEeccccccCCCCCce
Confidence            56789999999999999999999999999999999999999999999999998543  4679999999999999999999


Q ss_pred             cccccceeeecCCceeEeecCceeeEEEEEEeecCCCCCCCCcCeEEEEEEeCCCCCCcc----ccCCCCceEEEEEEee
Q 040617           82 RATRAGYWKSTGKDRRVTYQSRAIGMKKTLVYYRGRAPQGIRTDWVMHEYRLDDKECDDI----SAGIQDSYALCRVFKK  157 (247)
Q Consensus        82 R~t~gG~Wk~~G~~~~I~~~g~~iG~Krtl~Fy~g~~~~g~rT~WvM~EY~l~~~~~~~~----~~~~~~~~VLCrIykk  157 (247)
                      |+|++||||++|++++|.++|.+||+||+|+||.|+++++.+|+|+||||+|........    .....++|||||||+|
T Consensus        89 R~t~~G~WkatG~dk~I~~~g~~vG~KktLvFy~g~~p~g~kT~WvMhEY~L~~~~~~~~~~~~~~~~~~~wVlCrvf~K  168 (174)
T 3ulx_A           89 RAAGNGYWKATGADKPVAPRGRTLGIKKALVFYAGKAPRGVKTDWIMHEYRLADAGRAAAGAKKGSLRLDDWVLCRLYNK  168 (174)
T ss_dssp             EEETTEEEEECSCCEEECCSSSCCEEEEEEEEEESSTTSCEEEEEEEEEEEECSCC-----------CCSSEEEEEEEES
T ss_pred             eecCCceEccCCCCcEEeeCCcEEEEEEEEEEecCCCCCCCcCCeEEEEEEeCCCCCcccccccCCCCCCCEEEEEEEEc
Confidence            999999999999999999989999999999999999999999999999999998754321    1023579999999998


Q ss_pred             CC
Q 040617          158 NG  159 (247)
Q Consensus       158 ~~  159 (247)
                      +.
T Consensus       169 ~~  170 (174)
T 3ulx_A          169 KN  170 (174)
T ss_dssp             CC
T ss_pred             CC
Confidence            75

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A

Probab=100.00  E-value=1.3e-57  Score=383.08  Aligned_cols=156  Identities=49%  Similarity=1.004  Sum_probs=131.8

Q ss_pred             CCCCCCCCceeCCChHHHHHHHHHhhHcCCCCCcCceeecCCCCCCcccchhhcCCCCCCCceEEeccccccCCCCCccc
Q 040617            2 APVGLPPGFRFHPTDEELVNYYLKRKINGQEIELDIIPEVDLYKCEPWELAEKSFLPSRDPEWYFFGPRDRKYPNGFRTN   81 (247)
Q Consensus         2 ~p~~LPpGfrF~PTDeELI~~YL~~Ki~g~~l~~~~I~evDvy~~~PwdL~~~~~~~~~d~~wYFFt~r~~k~~~g~R~~   81 (247)
                      +.+.|||||||+|||||||.|||++|+.|.+++.++|+++|||++|||+||+.+.  .++.+||||+++++++++|.|++
T Consensus        13 ~~~~lPpGfRF~PTDeELv~~YL~~K~~g~~~~~~~I~e~Diy~~~Pw~Lp~~~~--~g~~ewyFFs~r~~k~~~g~R~~   90 (171)
T 1ut7_A           13 TQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKAL--FGEKEWYFFSPRDRKYPNGSRPN   90 (171)
T ss_dssp             CSSCCCTTEEECCCHHHHHHHTHHHHHTTCCCSSCCSEECCGGGSCGGGHHHHSS--SCSSEEEEEEECCC-------CC
T ss_pred             cccCCCCcceeCCChHHHHHHHHHHHhcCCCCCCCeEeecccccCChhHhhchhh--cCCccEEEEeccccccCCCCccc
Confidence            5678999999999999999999999999999999999999999999999999853  35789999999999999999999


Q ss_pred             cccccceeeecCCceeEeecCceeeEEEEEEeecCCCCCCCCcCeEEEEEEeCCCCCCccccCCCCceEEEEEEeeCCC
Q 040617           82 RATRAGYWKSTGKDRRVTYQSRAIGMKKTLVYYRGRAPQGIRTDWVMHEYRLDDKECDDISAGIQDSYALCRVFKKNGI  160 (247)
Q Consensus        82 R~t~gG~Wk~~G~~~~I~~~g~~iG~Krtl~Fy~g~~~~g~rT~WvM~EY~l~~~~~~~~~~~~~~~~VLCrIykk~~~  160 (247)
                      |+|++||||++|++++|..++.+||+||+|+||.++++++.+|+|+||||+|........ ....++|||||||+|+..
T Consensus        91 R~t~~G~Wk~tG~~k~I~~~~~~vG~KktLvFy~g~~p~g~kT~WvMhEY~l~~~~~~~~-~~~~~~~VlCrv~~k~~~  168 (171)
T 1ut7_A           91 RVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIEPSRRNG-STKLDDWVLCRIYKKQSS  168 (171)
T ss_dssp             EEETTEEEEEEEEEEEEEETTEEEEEEEEEEEEESSTTSCEEEEEEEEEEEECCCC---------CCEEEEEEEECC--
T ss_pred             ccCCCCEEeccCCCceEEecCcEEEEEEEEEEEcCcCCCCCcCCeEEEEEEcCCCccccC-cccCCCEEEEEEEEcCCC
Confidence            999999999999999999999999999999999999999999999999999998652211 134689999999999863

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	247
d1ut7a_	166	b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mou	1e-71

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 166

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  214 bits (546), Expect = 1e-71
 Identities = 78/157 (49%), Positives = 108/157 (68%), Gaps = 3/157 (1%)

Query: 1   MAPVGLPPGFRFHPTDEELVNYYLKRKINGQEIELDIIPEVDLYKCEPWELAEKSFLPSR 60
           +  + LPPGFRF+PTDEEL+  YL RK  G +  L +I E+DLYK +PW L  K+    +
Sbjct: 12  LTQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEK 71

Query: 61  DPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRVTYQSRAIGMKKTLVYYRGRAPQ 120
             EWYFF PRDRKYPNG R NR   +GYWK+TG D+ ++ + + +G+KK LV+Y G+AP+
Sbjct: 72  --EWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPK 129

Query: 121 GIRTDWVMHEYRLDDKECDDISAGIQDSYALCRVFKK 157
           G +T+W+MHEYRL +    + S    D + LCR++KK
Sbjct: 130 GTKTNWIMHEYRLIEPSRRNGS-TKLDDWVLCRIYKK 165

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	247
d1ut7a_	166	No apical meristem (NAM, ANAC) {Mouse-ear cress (A	100.0

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1.5e-55  Score=367.08  Aligned_cols=155  Identities=50%  Similarity=1.022  Sum_probs=131.5

Q ss_pred             CCCCCCCCCceeCCChHHHHHHHHHhhHcCCCCCcCceeecCCCCCCcccchhhcCCCCCCCceEEeccccccCCCCCcc
Q 040617            1 MAPVGLPPGFRFHPTDEELVNYYLKRKINGQEIELDIIPEVDLYKCEPWELAEKSFLPSRDPEWYFFGPRDRKYPNGFRT   80 (247)
Q Consensus         1 m~p~~LPpGfrF~PTDeELI~~YL~~Ki~g~~l~~~~I~evDvy~~~PwdL~~~~~~~~~d~~wYFFt~r~~k~~~g~R~   80 (247)
                      .+++.|||||||+|||||||.|||++|+.|.+++.++|+++|||++|||+||+...  .++++||||+++.+++++|.|.
T Consensus        12 ~~~l~LPpG~RF~PTDeELv~~YL~~Ki~g~~l~~~~I~~~Dvy~~~Pw~Lp~~~~--~~~~~wyFft~~~~k~~~g~r~   89 (166)
T d1ut7a_          12 LTQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKAL--FGEKEWYFFSPRDRKYPNGSRP   89 (166)
T ss_dssp             CCSSCCCTTEEECCCHHHHHHHTHHHHHTTCCCSSCCSEECCGGGSCGGGHHHHSS--SCSSEEEEEEECCC-------C
T ss_pred             cccccCCCccccCCCcHHHHHHHHHHHHcCCCCCcccceeccCCcCChhhccchhc--cCcceEEEEeeeccccCCCCcc
Confidence            36899999999999999999999999999999999999999999999999998743  3577899999999999999999


Q ss_pred             ccccccceeeecCCceeEeecCceeeEEEEEEeecCCCCCCCCcCeEEEEEEeCCCCCCccccCCCCceEEEEEEeeC
Q 040617           81 NRATRAGYWKSTGKDRRVTYQSRAIGMKKTLVYYRGRAPQGIRTDWVMHEYRLDDKECDDISAGIQDSYALCRVFKKN  158 (247)
Q Consensus        81 ~R~t~gG~Wk~~G~~~~I~~~g~~iG~Krtl~Fy~g~~~~g~rT~WvM~EY~l~~~~~~~~~~~~~~~~VLCrIykk~  158 (247)
                      +|++++|+||++|++++|.++|.+||+|++|+||+++.+++.+|+|+||||+|.+....... ...++|||||||+|.
T Consensus        90 ~R~~g~G~Wk~~g~~~~i~~~g~~vG~kk~l~fy~~~~~~~~~t~W~M~EY~l~~~~~~~~~-~~~~~~VLCrI~~Kk  166 (166)
T d1ut7a_          90 NRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIEPSRRNGS-TKLDDWVLCRIYKKQ  166 (166)
T ss_dssp             CEEETTEEEEEEEEEEEEEETTEEEEEEEEEEEEESSTTSCEEEEEEEEEEEECCCC---------CCEEEEEEEECC
T ss_pred             ccccCCCEecccCCCceEecCCcEEEEEEEEEEEecCCCCCCccCeEEEEEecCCcccccCc-cccCCEEEEEEEecC
Confidence            99999999999999999999999999999999999999999999999999999886543322 456789999999974