Citrus Sinensis ID: 040928


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-----
LVFVSLLALDIGSHWLQMYSTFLRGKTSHEDVKDSTNWLFKAYYGNRMFMGYCCVAFEVLYLILFLIAEKQCESLVDGSPLSFLVALSLFGWAIKQMINVIQVTCTPYDGNVCLS
cHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccc
cHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccEHEEEccccHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEccc
LVFVSLLALDIGSHWLQMYSTFLrgktshedvkdSTNWLFKAYYGNRMFMGYCCVAFEVLYLILFLIAEKQceslvdgsplSFLVALSLFGWAIKQMINVIQVTctpydgnvcls
LVFVSLLALDIGSHWLQMYSTFLRgktshedvkdSTNWLFKAYYGNRMFMGYCCVAFEVLYLILFLIAEKQCESLVDGSPLSFLVALSLFGWAIKQMINVIQVTCTPYDGNVCLS
LVFVSLLALDIGSHWLQMYSTFLRGKTSHEDVKDSTNWLFKAYYGNRMFMGYCCVAFEVLYLILFLIAEKQCESLVDGSPLSFLVALSLFGWAIKQMINVIQVTCTPYDGNVCLS
*VFVSLLALDIGSHWLQMYSTFLRGKTSHEDVKDSTNWLFKAYYGNRMFMGYCCVAFEVLYLILFLIAEKQCESLVDGSPLSFLVALSLFGWAIKQMINVIQVTCTPYDGNVC**
LVFVSLLALDIGSHWLQMYSTF*************TNWLFKAYYGNRMFMGYCCVAFEVLYLILFLIAEKQCESLVDGSPLSFLVALSLFGWAIKQMINVIQVTCTPYDGNVCLS
LVFVSLLALDIGSHWLQMYSTFLRGKTSHEDVKDSTNWLFKAYYGNRMFMGYCCVAFEVLYLILFLIAEKQCESLVDGSPLSFLVALSLFGWAIKQMINVIQVTCTPYDGNVCLS
LVFVSLLALDIGSHWLQMYSTFLRGKTSHEDVKDSTNWLFKAYYGNRMFMGYCCVAFEVLYLILFLIAEKQCESLVDGSPLSFLVALSLFGWAIKQMINVIQVTCTPYDGNVCLS
oooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooo
ooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooo
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LVFVSLLALDIGSHWLQMYSTFLRGKTSHEDVKDSTNWLFKAYYGNRMFMGYCCVAFEVLYLILFLIAEKQCESLVDGSPLSFLVALSLFGWAIKQMINVIQVTCTPYDGNVCLS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query115 2.2.26 [Sep-21-2011]
Q8LBA6227 CDP-diacylglycerol--inosi yes no 0.947 0.480 0.647 4e-38
Q8GUK6225 Probable CDP-diacylglycer no no 0.947 0.484 0.639 4e-35
Q10153251 CDP-diacylglycerol--inosi yes no 0.895 0.410 0.310 5e-10
P06197220 CDP-diacylglycerol--inosi yes no 0.834 0.436 0.306 3e-06
Q8VDP6213 CDP-diacylglycerol--inosi yes no 0.573 0.309 0.348 3e-06
P70500213 CDP-diacylglycerol--inosi yes no 0.573 0.309 0.348 3e-06
O14735213 CDP-diacylglycerol--inosi yes no 0.521 0.281 0.35 5e-06
>sp|Q8LBA6|PIS1_ARATH CDP-diacylglycerol--inositol 3-phosphatidyltransferase 1 OS=Arabidopsis thaliana GN=PIS1 PE=1 SV=2 Back     alignment and function desciption
 Score =  156 bits (394), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 79/122 (64%), Positives = 96/122 (78%), Gaps = 13/122 (10%)

Query: 1   LVFVSLLALDIGSHWLQMYSTFLRGKTSHEDVKDSTNWLFKAYYGNRMFMGYCCVAFEVL 60
           LVF+SLLALDI SHWLQMYSTFL GK+SH+DVKDST+WLF+ YYGNR+FM YCCV+ EVL
Sbjct: 99  LVFLSLLALDIASHWLQMYSTFLAGKSSHKDVKDSTSWLFRLYYGNRIFMCYCCVSCEVL 158

Query: 61  YLILFLIAEKQCESLVDG--------SPLSFLVALSLFGWAIKQMINVIQV-----TCTP 107
           Y+IL LIA+ Q E+L++         SPLSFL+AL+LFGW++KQ INVIQ+      C  
Sbjct: 159 YIILLLIAKNQSENLLNVVVATLTQISPLSFLLALTLFGWSMKQTINVIQMKTAADVCVL 218

Query: 108 YD 109
           YD
Sbjct: 219 YD 220




Catalyzes the biosynthesis of phosphatidylinositol (PtdIns) as well as PtdIns:inositol exchange reaction. May thus act to reduce an excessive cellular PtdIns content. The exchange activity is due to the reverse reaction of PtdIns synthase and is dependent on CMP, which is tightly bound to the enzyme.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 8EC: .EC: 1EC: 1
>sp|Q8GUK6|PIS2_ARATH Probable CDP-diacylglycerol--inositol 3-phosphatidyltransferase 2 OS=Arabidopsis thaliana GN=PIS2 PE=2 SV=2 Back     alignment and function description
>sp|Q10153|PIS_SCHPO CDP-diacylglycerol--inositol 3-phosphatidyltransferase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pis1 PE=3 SV=1 Back     alignment and function description
>sp|P06197|PIS_YEAST CDP-diacylglycerol--inositol 3-phosphatidyltransferase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PIS1 PE=1 SV=1 Back     alignment and function description
>sp|Q8VDP6|CDIPT_MOUSE CDP-diacylglycerol--inositol 3-phosphatidyltransferase OS=Mus musculus GN=Cdipt PE=1 SV=1 Back     alignment and function description
>sp|P70500|CDIPT_RAT CDP-diacylglycerol--inositol 3-phosphatidyltransferase OS=Rattus norvegicus GN=Cdipt PE=1 SV=1 Back     alignment and function description
>sp|O14735|CDIPT_HUMAN CDP-diacylglycerol--inositol 3-phosphatidyltransferase OS=Homo sapiens GN=CDIPT PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query115
255584952 227 phosphatidylinositol synthase, putative 0.965 0.488 0.701 2e-39
224078333 238 predicted protein [Populus trichocarpa] 0.895 0.432 0.720 7e-39
449458618 227 PREDICTED: CDP-diacylglycerol--inositol 0.965 0.488 0.669 3e-38
357473775 227 CDP-diacylglycerol-inositol 3-phosphatid 0.947 0.480 0.663 8e-38
388506578 227 unknown [Medicago truncatula] 0.947 0.480 0.663 1e-37
356538445 227 PREDICTED: CDP-diacylglycerol--inositol 0.947 0.480 0.663 2e-36
15220618 227 CDP-diacylglycerol--inositol 3-phosphati 0.947 0.480 0.647 2e-36
21592927 227 phosphatidylinositol synthase PIS1 [Arab 0.947 0.480 0.647 2e-36
297841527 227 ATPIS1 [Arabidopsis lyrata subsp. lyrata 0.947 0.480 0.639 3e-36
21745398 227 phosphatidylinositol synthase [Brassica 0.947 0.480 0.614 3e-35
>gi|255584952|ref|XP_002533188.1| phosphatidylinositol synthase, putative [Ricinus communis] gi|223527001|gb|EEF29194.1| phosphatidylinositol synthase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  166 bits (419), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 87/124 (70%), Positives = 96/124 (77%), Gaps = 13/124 (10%)

Query: 1   LVFVSLLALDIGSHWLQMYSTFLRGKTSHEDVKDSTNWLFKAYYGNRMFMGYCCVAFEVL 60
           LVF+SLL+LDI SHWLQMYSTFL GKTSH+DVKDSTNWLFKAYYGNRMFM YCCVA EVL
Sbjct: 99  LVFLSLLSLDIASHWLQMYSTFLLGKTSHKDVKDSTNWLFKAYYGNRMFMAYCCVACEVL 158

Query: 61  YLILFLIAEKQCESLVDG--------SPLSFLVALSLFGWAIKQMINVIQVT-----CTP 107
           Y+ILFLIAEKQ E+L +         S  S L+ALSLFGWAIKQ +NVIQ+      C  
Sbjct: 159 YIILFLIAEKQDENLTEVLINSMKELSVTSLLLALSLFGWAIKQTVNVIQMKTAADICVL 218

Query: 108 YDGN 111
           YD N
Sbjct: 219 YDIN 222




Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224078333|ref|XP_002305523.1| predicted protein [Populus trichocarpa] gi|222848487|gb|EEE86034.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449458618|ref|XP_004147044.1| PREDICTED: CDP-diacylglycerol--inositol 3-phosphatidyltransferase 1-like [Cucumis sativus] gi|449489641|ref|XP_004158372.1| PREDICTED: CDP-diacylglycerol--inositol 3-phosphatidyltransferase 1-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|357473775|ref|XP_003607172.1| CDP-diacylglycerol-inositol 3-phosphatidyltransferase [Medicago truncatula] gi|355508227|gb|AES89369.1| CDP-diacylglycerol-inositol 3-phosphatidyltransferase [Medicago truncatula] Back     alignment and taxonomy information
>gi|388506578|gb|AFK41355.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|356538445|ref|XP_003537714.1| PREDICTED: CDP-diacylglycerol--inositol 3-phosphatidyltransferase 1-like [Glycine max] Back     alignment and taxonomy information
>gi|15220618|ref|NP_176967.1| CDP-diacylglycerol--inositol 3-phosphatidyltransferase [Arabidopsis thaliana] gi|71153053|sp|Q8LBA6.2|PIS1_ARATH RecName: Full=CDP-diacylglycerol--inositol 3-phosphatidyltransferase 1; AltName: Full=Phosphatidylinositol synthase 1; Short=AtPIS1; Short=PI synthase 1; Short=PtdIns synthase 1 gi|12324081|gb|AAG52009.1|AC012563_19 phosphatidylinositol synthase (PIS1); 53044-51460 [Arabidopsis thaliana] gi|3367632|emb|CAA04172.1| phosphatidylinositol synthase [Arabidopsis thaliana] gi|22655196|gb|AAM98188.1| phosphatidylinositol synthase PIS1 [Arabidopsis thaliana] gi|332196613|gb|AEE34734.1| CDP-diacylglycerol--inositol 3-phosphatidyltransferase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|21592927|gb|AAM64877.1| phosphatidylinositol synthase PIS1 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297841527|ref|XP_002888645.1| ATPIS1 [Arabidopsis lyrata subsp. lyrata] gi|297334486|gb|EFH64904.1| ATPIS1 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|21745398|gb|AAM77369.1|AF521301_1 phosphatidylinositol synthase [Brassica napus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query115
TAIR|locus:2121184225 PIS2 "probable CDP-diacylglyce 0.947 0.484 0.680 8.9e-38
TAIR|locus:2200241227 PIS1 "phosphatidylinositol syn 0.947 0.480 0.647 4.4e-36
WB|WBGene00012897220 pisy-1 [Caenorhabditis elegans 0.565 0.295 0.434 3.5e-11
ASPGD|ASPL0000054101306 AN0913 [Emericella nidulans (t 0.591 0.222 0.357 4.4e-11
POMBASE|SPAC1D4.08251 pis1 "CDP-diacylglycerol--inos 0.591 0.270 0.367 1e-10
UNIPROTKB|G4MWC5311 MGG_08368 "CDP-diacylglycerol- 0.591 0.218 0.328 7.9e-10
CGD|CAL0005824230 orf19.6860 [Candida albicans ( 0.8 0.4 0.326 1.7e-09
DICTYBASE|DDB_G0284857207 cdipt "CDP-diacylglycerol--ino 0.808 0.449 0.323 2.6e-08
ZFIN|ZDB-GENE-040426-2536213 cdipt "CDP-diacylglycerol--ino 0.573 0.309 0.303 5.4e-08
UNIPROTKB|J9PAT0341 CDIPT "Uncharacterized protein 0.878 0.296 0.314 6.1e-08
TAIR|locus:2121184 PIS2 "probable CDP-diacylglycerol--inositol 3-phosphatidyltransferase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 405 (147.6 bits), Expect = 8.9e-38, P = 8.9e-38
 Identities = 83/122 (68%), Positives = 95/122 (77%)

Query:     1 LVFVSLLALDIGSHWLQMYSTFLRGKTSHEDVKDSTNWLFKAYYGNRMFMGYCCVAFEVL 60
             LVF+SLLALDI SHWLQMYSTFL GKTSH+DVKDST+WLF+ YYGNRMFMGYCCV+ EVL
Sbjct:    96 LVFLSLLALDIASHWLQMYSTFLSGKTSHKDVKDSTSWLFRLYYGNRMFMGYCCVSCEVL 155

Query:    61 YLILFLIAEKQCE--------SLVDGSPLSFLVALSLFGWAIKQMINVIQV-----TCTP 107
             Y+IL LIA  Q E        SL+  SPLS L+ALS+FGW+IKQ+INVIQ+      C  
Sbjct:   156 YIILLLIATNQTENLMNVVVKSLMQISPLSLLLALSIFGWSIKQIINVIQMKTAADVCVL 215

Query:   108 YD 109
             YD
Sbjct:   216 YD 217




GO:0008654 "phospholipid biosynthetic process" evidence=IEA
GO:0016020 "membrane" evidence=IEA
GO:0016780 "phosphotransferase activity, for other substituted phosphate groups" evidence=IEA
GO:0006661 "phosphatidylinositol biosynthetic process" evidence=RCA;TAS
GO:0005783 "endoplasmic reticulum" evidence=IDA
GO:0005794 "Golgi apparatus" evidence=IDA
TAIR|locus:2200241 PIS1 "phosphatidylinositol synthase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
WB|WBGene00012897 pisy-1 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms
ASPGD|ASPL0000054101 AN0913 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
POMBASE|SPAC1D4.08 pis1 "CDP-diacylglycerol--inositol 3-phosphatidyltransferase Pis1 (predicted)" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms
UNIPROTKB|G4MWC5 MGG_08368 "CDP-diacylglycerol-inositol 3-phosphatidyltransferase PIS" [Magnaporthe oryzae 70-15 (taxid:242507)] Back     alignment and assigned GO terms
CGD|CAL0005824 orf19.6860 [Candida albicans (taxid:5476)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0284857 cdipt "CDP-diacylglycerol--inositol 3-phosphatidyltransferase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-040426-2536 cdipt "CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase)" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|J9PAT0 CDIPT "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 115
KOG3240218 consensus Phosphatidylinositol synthase [Lipid tra 100.0
>KOG3240 consensus Phosphatidylinositol synthase [Lipid transport and metabolism] Back     alignment and domain information
Probab=100.00  E-value=4.2e-44  Score=276.26  Aligned_cols=111  Identities=42%  Similarity=0.583  Sum_probs=106.5

Q ss_pred             ChhHHHHHHHhhhhHHHHhHhhhcCCCCCcccCCCcchhhhhhccChhHHHHHHHHHHHHHHHHHHHhhhhcccccCchH
Q 040928            1 LVFVSLLALDIGSHWLQMYSTFLRGKTSHEDVKDSTNWLFKAYYGNRMFMGYCCVAFEVLYLILFLIAEKQCESLVDGSP   80 (115)
Q Consensus         1 ~~Fq~l~~LDi~SHw~hmyssl~~G~~SHK~v~~~~~~iLrlYY~~r~~Lf~~C~gnE~Fyi~LYll~f~~~~~~~~~~~   80 (115)
                      ++||+.+++||+|||+|||+|.+.|++|||++|++.||+||+|||||++||++|++||+||+.||+++|.++|.+.+..+
T Consensus        97 ~~fqL~~~lDiaSHwlhm~st~l~G~sSHK~v~~~~n~llrLYY~~r~vL~~~C~~nE~Fyi~LYl~~f~~~pll~~~~~  176 (218)
T KOG3240|consen   97 VFFQLSMALDIASHWLHMHSTVLVGKSSHKDVDDSTNWLLRLYYTNRDVLFTICAGNELFYILLYLLAFSQGPLLGNVVV  176 (218)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhccccccccccccceeEEEEecCcceehhhhhhHHHHHHHHHHHHcCCCCceeeeeH
Confidence            47999999999999999999999999999999999999999999999999999999999999999999999998888888


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhhcCc
Q 040928           81 LSFLVALSLFGWAIKQMINVIQVTCTPYDGN  111 (115)
Q Consensus        81 ~~~l~~vs~P~~~~Kq~iNvvQl~~A~~~~~  111 (115)
                      +.+...+++|+..+||+|||||+++||...+
T Consensus       177 ~s~~~~lsfp~a~~KqlInVi~l~tAa~~~~  207 (218)
T KOG3240|consen  177 FSITQILSFPLALLKQLINVIQLITAADVCV  207 (218)
T ss_pred             HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999998654




Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00