Citrus Sinensis ID: 040928
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 115 | ||||||
| 255584952 | 227 | phosphatidylinositol synthase, putative | 0.965 | 0.488 | 0.701 | 2e-39 | |
| 224078333 | 238 | predicted protein [Populus trichocarpa] | 0.895 | 0.432 | 0.720 | 7e-39 | |
| 449458618 | 227 | PREDICTED: CDP-diacylglycerol--inositol | 0.965 | 0.488 | 0.669 | 3e-38 | |
| 357473775 | 227 | CDP-diacylglycerol-inositol 3-phosphatid | 0.947 | 0.480 | 0.663 | 8e-38 | |
| 388506578 | 227 | unknown [Medicago truncatula] | 0.947 | 0.480 | 0.663 | 1e-37 | |
| 356538445 | 227 | PREDICTED: CDP-diacylglycerol--inositol | 0.947 | 0.480 | 0.663 | 2e-36 | |
| 15220618 | 227 | CDP-diacylglycerol--inositol 3-phosphati | 0.947 | 0.480 | 0.647 | 2e-36 | |
| 21592927 | 227 | phosphatidylinositol synthase PIS1 [Arab | 0.947 | 0.480 | 0.647 | 2e-36 | |
| 297841527 | 227 | ATPIS1 [Arabidopsis lyrata subsp. lyrata | 0.947 | 0.480 | 0.639 | 3e-36 | |
| 21745398 | 227 | phosphatidylinositol synthase [Brassica | 0.947 | 0.480 | 0.614 | 3e-35 |
| >gi|255584952|ref|XP_002533188.1| phosphatidylinositol synthase, putative [Ricinus communis] gi|223527001|gb|EEF29194.1| phosphatidylinositol synthase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 166 bits (419), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 87/124 (70%), Positives = 96/124 (77%), Gaps = 13/124 (10%)
Query: 1 LVFVSLLALDIGSHWLQMYSTFLRGKTSHEDVKDSTNWLFKAYYGNRMFMGYCCVAFEVL 60
LVF+SLL+LDI SHWLQMYSTFL GKTSH+DVKDSTNWLFKAYYGNRMFM YCCVA EVL
Sbjct: 99 LVFLSLLSLDIASHWLQMYSTFLLGKTSHKDVKDSTNWLFKAYYGNRMFMAYCCVACEVL 158
Query: 61 YLILFLIAEKQCESLVDG--------SPLSFLVALSLFGWAIKQMINVIQVT-----CTP 107
Y+ILFLIAEKQ E+L + S S L+ALSLFGWAIKQ +NVIQ+ C
Sbjct: 159 YIILFLIAEKQDENLTEVLINSMKELSVTSLLLALSLFGWAIKQTVNVIQMKTAADICVL 218
Query: 108 YDGN 111
YD N
Sbjct: 219 YDIN 222
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224078333|ref|XP_002305523.1| predicted protein [Populus trichocarpa] gi|222848487|gb|EEE86034.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|449458618|ref|XP_004147044.1| PREDICTED: CDP-diacylglycerol--inositol 3-phosphatidyltransferase 1-like [Cucumis sativus] gi|449489641|ref|XP_004158372.1| PREDICTED: CDP-diacylglycerol--inositol 3-phosphatidyltransferase 1-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|357473775|ref|XP_003607172.1| CDP-diacylglycerol-inositol 3-phosphatidyltransferase [Medicago truncatula] gi|355508227|gb|AES89369.1| CDP-diacylglycerol-inositol 3-phosphatidyltransferase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|388506578|gb|AFK41355.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|356538445|ref|XP_003537714.1| PREDICTED: CDP-diacylglycerol--inositol 3-phosphatidyltransferase 1-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|15220618|ref|NP_176967.1| CDP-diacylglycerol--inositol 3-phosphatidyltransferase [Arabidopsis thaliana] gi|71153053|sp|Q8LBA6.2|PIS1_ARATH RecName: Full=CDP-diacylglycerol--inositol 3-phosphatidyltransferase 1; AltName: Full=Phosphatidylinositol synthase 1; Short=AtPIS1; Short=PI synthase 1; Short=PtdIns synthase 1 gi|12324081|gb|AAG52009.1|AC012563_19 phosphatidylinositol synthase (PIS1); 53044-51460 [Arabidopsis thaliana] gi|3367632|emb|CAA04172.1| phosphatidylinositol synthase [Arabidopsis thaliana] gi|22655196|gb|AAM98188.1| phosphatidylinositol synthase PIS1 [Arabidopsis thaliana] gi|332196613|gb|AEE34734.1| CDP-diacylglycerol--inositol 3-phosphatidyltransferase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|21592927|gb|AAM64877.1| phosphatidylinositol synthase PIS1 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|297841527|ref|XP_002888645.1| ATPIS1 [Arabidopsis lyrata subsp. lyrata] gi|297334486|gb|EFH64904.1| ATPIS1 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
| >gi|21745398|gb|AAM77369.1|AF521301_1 phosphatidylinositol synthase [Brassica napus] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 115 | ||||||
| TAIR|locus:2121184 | 225 | PIS2 "probable CDP-diacylglyce | 0.947 | 0.484 | 0.680 | 8.9e-38 | |
| TAIR|locus:2200241 | 227 | PIS1 "phosphatidylinositol syn | 0.947 | 0.480 | 0.647 | 4.4e-36 | |
| WB|WBGene00012897 | 220 | pisy-1 [Caenorhabditis elegans | 0.565 | 0.295 | 0.434 | 3.5e-11 | |
| ASPGD|ASPL0000054101 | 306 | AN0913 [Emericella nidulans (t | 0.591 | 0.222 | 0.357 | 4.4e-11 | |
| POMBASE|SPAC1D4.08 | 251 | pis1 "CDP-diacylglycerol--inos | 0.591 | 0.270 | 0.367 | 1e-10 | |
| UNIPROTKB|G4MWC5 | 311 | MGG_08368 "CDP-diacylglycerol- | 0.591 | 0.218 | 0.328 | 7.9e-10 | |
| CGD|CAL0005824 | 230 | orf19.6860 [Candida albicans ( | 0.8 | 0.4 | 0.326 | 1.7e-09 | |
| DICTYBASE|DDB_G0284857 | 207 | cdipt "CDP-diacylglycerol--ino | 0.808 | 0.449 | 0.323 | 2.6e-08 | |
| ZFIN|ZDB-GENE-040426-2536 | 213 | cdipt "CDP-diacylglycerol--ino | 0.573 | 0.309 | 0.303 | 5.4e-08 | |
| UNIPROTKB|J9PAT0 | 341 | CDIPT "Uncharacterized protein | 0.878 | 0.296 | 0.314 | 6.1e-08 |
| TAIR|locus:2121184 PIS2 "probable CDP-diacylglycerol--inositol 3-phosphatidyltransferase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 405 (147.6 bits), Expect = 8.9e-38, P = 8.9e-38
Identities = 83/122 (68%), Positives = 95/122 (77%)
Query: 1 LVFVSLLALDIGSHWLQMYSTFLRGKTSHEDVKDSTNWLFKAYYGNRMFMGYCCVAFEVL 60
LVF+SLLALDI SHWLQMYSTFL GKTSH+DVKDST+WLF+ YYGNRMFMGYCCV+ EVL
Sbjct: 96 LVFLSLLALDIASHWLQMYSTFLSGKTSHKDVKDSTSWLFRLYYGNRMFMGYCCVSCEVL 155
Query: 61 YLILFLIAEKQCE--------SLVDGSPLSFLVALSLFGWAIKQMINVIQV-----TCTP 107
Y+IL LIA Q E SL+ SPLS L+ALS+FGW+IKQ+INVIQ+ C
Sbjct: 156 YIILLLIATNQTENLMNVVVKSLMQISPLSLLLALSIFGWSIKQIINVIQMKTAADVCVL 215
Query: 108 YD 109
YD
Sbjct: 216 YD 217
|
|
| TAIR|locus:2200241 PIS1 "phosphatidylinositol synthase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| WB|WBGene00012897 pisy-1 [Caenorhabditis elegans (taxid:6239)] | Back alignment and assigned GO terms |
|---|
| ASPGD|ASPL0000054101 AN0913 [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
| POMBASE|SPAC1D4.08 pis1 "CDP-diacylglycerol--inositol 3-phosphatidyltransferase Pis1 (predicted)" [Schizosaccharomyces pombe (taxid:4896)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|G4MWC5 MGG_08368 "CDP-diacylglycerol-inositol 3-phosphatidyltransferase PIS" [Magnaporthe oryzae 70-15 (taxid:242507)] | Back alignment and assigned GO terms |
|---|
| CGD|CAL0005824 orf19.6860 [Candida albicans (taxid:5476)] | Back alignment and assigned GO terms |
|---|
| DICTYBASE|DDB_G0284857 cdipt "CDP-diacylglycerol--inositol 3-phosphatidyltransferase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-040426-2536 cdipt "CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase)" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|J9PAT0 CDIPT "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 115 | |||
| KOG3240 | 218 | consensus Phosphatidylinositol synthase [Lipid tra | 100.0 |
| >KOG3240 consensus Phosphatidylinositol synthase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-44 Score=276.26 Aligned_cols=111 Identities=42% Similarity=0.583 Sum_probs=106.5
Q ss_pred ChhHHHHHHHhhhhHHHHhHhhhcCCCCCcccCCCcchhhhhhccChhHHHHHHHHHHHHHHHHHHHhhhhcccccCchH
Q 040928 1 LVFVSLLALDIGSHWLQMYSTFLRGKTSHEDVKDSTNWLFKAYYGNRMFMGYCCVAFEVLYLILFLIAEKQCESLVDGSP 80 (115)
Q Consensus 1 ~~Fq~l~~LDi~SHw~hmyssl~~G~~SHK~v~~~~~~iLrlYY~~r~~Lf~~C~gnE~Fyi~LYll~f~~~~~~~~~~~ 80 (115)
++||+.+++||+|||+|||+|.+.|++|||++|++.||+||+|||||++||++|++||+||+.||+++|.++|.+.+..+
T Consensus 97 ~~fqL~~~lDiaSHwlhm~st~l~G~sSHK~v~~~~n~llrLYY~~r~vL~~~C~~nE~Fyi~LYl~~f~~~pll~~~~~ 176 (218)
T KOG3240|consen 97 VFFQLSMALDIASHWLHMHSTVLVGKSSHKDVDDSTNWLLRLYYTNRDVLFTICAGNELFYILLYLLAFSQGPLLGNVVV 176 (218)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccccccccccceeEEEEecCcceehhhhhhHHHHHHHHHHHHcCCCCceeeeeH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999998888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhcCc
Q 040928 81 LSFLVALSLFGWAIKQMINVIQVTCTPYDGN 111 (115)
Q Consensus 81 ~~~l~~vs~P~~~~Kq~iNvvQl~~A~~~~~ 111 (115)
+.+...+++|+..+||+|||||+++||...+
T Consensus 177 ~s~~~~lsfp~a~~KqlInVi~l~tAa~~~~ 207 (218)
T KOG3240|consen 177 FSITQILSFPLALLKQLINVIQLITAADVCV 207 (218)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999998654
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00