Citrus Sinensis ID: 041025

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------10
Protein Sequence
MIDCSTAVELQNGHEAKEEEKSGRGMQVQGCKVEGLSIASPSRSISLNFLFTSHAHMDHIFTLLVLHIWRYSKNKFQPLKEKQKENQKPQKRKWLKVSN
Secondary Structure (PSIPRED)
ccccccHHHHccccHHHHHHHccccEEEEEEEEEEEEEcccccEEEEEEEEEcccHHHHHHHHHHHHHHHHccccccccHHHHHHcccHHccccEEccc
Secondary Structure Prediction (SSPRO)
cccccHHHHHcccccccHEcccccccEEEccEEEEEEEccccccEEHHHHHHcHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHcccccHcEEEEEcc
Coil and Loop (DISEMBL)
MIDCSTAVelqngheakeeeksgrgmqvqgckveglsiaspsrsisLNFLFTSHAHMDHIFTLLVLHIWRYSknkfqplkekqkenqkpqkrkwlkvsn
Flexible Loop (DISEMBL)
midcstavelqngheakeeeksgrgmqVQGCKVEGLSIASPSRSISLNFLFTSHAHMDHIFTLLVLHIWRYSKNKfqplkekqkenqkpqkrkwlkvsn
Low Complexity Region (SEG)
MIDCSTAVELQNGHEAKEEEKSGRGMQVQGCKVEGLSIASPSRSISLNFLFTSHAHMDHIFTLLVLHIWRYSKNKFqplkekqkenqkpqkrkWLKVSN
Disordered region (IsUnstruct)
**********************************GLSIA***RSISLNFLFTSHAHMDHIFTLLVLHIWRYSK**************************
Disordered Region (DISOPRED)
****STA************************KVEGLSIASPSRSISLNFLFTSHAHMDHIFTLLVLHIWRYSK********************WLK***
Disordered Region (DISEMBL)
MIDCSTAVELQN*****************GCKVEGLSIASPSRSISLNFLFTSHAHMDHIFTLLVLHIWRYSKNKFQP*********************
Disordered Region (DISPRO)
*IDCSTAVELQ************RGMQVQGCKVEGLSIASPSRSISLNFLFTSHAHMDHIFTLLVLHIWRYSKNKFQPLKEKQKENQKPQKRKWLKV**
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MIDCSTAVELQNGHEAKEEEKSGRGMQVQGCKVEGLSIASPSRSISLNFLFTSHAHMDHIFTLLVLHIWRYSKNKFQPLKEKQKENQKPQKRKWLKVSN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	99	2.2.26 [Sep-21-2011]
Q8LGU7	280	Nuclear ribonuclease Z OS	yes	no	0.373	0.132	0.392	0.0002

>sp|Q8LGU7|RNZN_ARATH Nuclear ribonuclease Z OS=Arabidopsis thaliana GN=NUZ PE=2 SV=3

 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 19/56 (33%)

Query: 24 RGMQVQGCKVEGLSIAS-------------------PSRSISLNFLFTSHAHMDHI 60
          + MQ++G  +EGLSI                     P R+IS +FLF SH+HMDHI
Sbjct: 5  KAMQIEGYPIEGLSIGGHETCIIFPSLRIAFDIGRCPHRAISQDFLFISHSHMDHI 60

Zinc phosphodiesterase, which displays some tRNA 3'-processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 2EC: 6EC: .EC: 1EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

No hits with e-value below 0.001 by BLAST

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	99
TAIR|locus:2019235	280	TRZ1 "tRNAse Z1" [Arabidopsis	0.202	0.071	0.7	1.6e-05
TAIR|locus:2058374	354	CPZ [Arabidopsis thaliana (tax	0.202	0.056	0.65	0.00027

TAIR|locus:2019235 TRZ1 "tRNAse Z1" [Arabidopsis thaliana (taxid:3702)]

 Score = 78 (32.5 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
 Identities = 14/20 (70%), Positives = 17/20 (85%)

Query:    41 PSRSISLNFLFTSHAHMDHI 60
             P R+IS +FLF SH+HMDHI
Sbjct:    41 PHRAISQDFLFISHSHMDHI 60

GO:0005634 "nucleus" evidence=ISM;TAS

GO:0008033 "tRNA processing" evidence=TAS

GO:0042781 "3'-tRNA processing endoribonuclease activity" evidence=IDA

GO:0042780 "tRNA 3'-end processing" evidence=IDA

GO:0000398 "mRNA splicing, via spliceosome" evidence=RCA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=RCA

GO:0030422 "production of siRNA involved in RNA interference" evidence=RCA

GO:0035196 "production of miRNAs involved in gene silencing by miRNA" evidence=RCA

GO:0043687 "post-translational protein modification" evidence=RCA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA

TAIR|locus:2058374 CPZ [Arabidopsis thaliana (taxid:3702)]

 Score = 75 (31.5 bits), Expect = 0.00027, Sum P(2) = 0.00027
 Identities = 13/20 (65%), Positives = 16/20 (80%)

Query:    41 PSRSISLNFLFTSHAHMDHI 60
             PSR+I   FLF +HAH+DHI
Sbjct:   110 PSRAIQQKFLFITHAHLDHI 129

GO:0005634 "nucleus" evidence=ISM

GO:0016787 "hydrolase activity" evidence=IEA

GO:0008033 "tRNA processing" evidence=TAS

GO:0009507 "chloroplast" evidence=ISS

GO:0042781 "3'-tRNA processing endoribonuclease activity" evidence=IDA

GO:0042780 "tRNA 3'-end processing" evidence=IDA

GO:0006364 "rRNA processing" evidence=RCA

GO:0006399 "tRNA metabolic process" evidence=RCA

GO:0009658 "chloroplast organization" evidence=RCA

GO:0016556 "mRNA modification" evidence=RCA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

No confident hit detected by STRING

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	99
COG1234	292	ElaC Metal-dependent hydrolases of the beta-lactam	98.69
PRK00055	270	ribonuclease Z; Reviewed	98.57
TIGR02649	303	true_RNase_BN ribonuclease BN. Members of this pro	98.56
TIGR02651	299	RNase_Z ribonuclease Z. Processing of the 3-prime	98.46
COG1237	259	Metal-dependent hydrolases of the beta-lactamase s	98.4
PF00753	194	Lactamase_B: Metallo-beta-lactamase superfamily; I	98.29
COG0595	555	mRNA degradation ribonucleases J1/J2 (metallo-beta	98.26
PF12706	194	Lactamase_B_2: Beta-lactamase superfamily domain;	98.26
TIGR02650	277	RNase_Z_T_toga ribonuclease Z, Thermotoga type. Me	98.23
PRK02113	252	putative hydrolase; Provisional	98.16
smart00849	183	Lactamase_B Metallo-beta-lactamase superfamily. Ap	98.14
TIGR00649	422	MG423 conserved hypothetical protein. Contains an	98.13
PRK02126	334	ribonuclease Z; Provisional	98.11
PRK05184	302	pyrroloquinoline quinone biosynthesis protein PqqB	98.08
PRK11244	250	phnP carbon-phosphorus lyase complex accessory pro	98.06
TIGR03307	238	PhnP phosphonate metabolism protein PhnP. This fam	98.06
COG1235	269	PhnP Metal-dependent hydrolases of the beta-lactam	97.99
TIGR02108	302	PQQ_syn_pqqB coenzyme PQQ biosynthesis protein B.	97.98
TIGR03675	630	arCOG00543 arCOG00543 universal archaeal KH-domain	97.95
COG1236	427	YSH1 Predicted exonuclease of the beta-lactamase f	97.89
COG1782	637	Predicted metal-dependent RNase, consists of a met	97.85
COG0491	252	GloB Zn-dependent hydrolases, including glyoxylase	97.83
KOG1136	501	consensus Predicted cleavage and polyadenylation s	97.75
PRK10241	251	hydroxyacylglutathione hydrolase; Provisional	97.75
PRK00685	228	metal-dependent hydrolase; Provisional	97.75
TIGR03413	248	GSH_gloB hydroxyacylglutathione hydrolase. Members	97.71
PRK11921	394	metallo-beta-lactamase/flavodoxin domain-containin	97.66
PLN02469	258	hydroxyacylglutathione hydrolase	97.63
PRK04286	298	hypothetical protein; Provisional	97.45
PRK05452	479	anaerobic nitric oxide reductase flavorubredoxin;	97.41
PLN02398	329	hydroxyacylglutathione hydrolase	97.22
PLN02962	251	hydroxyacylglutathione hydrolase	97.18
COG5212	356	PDE1 Low-affinity cAMP phosphodiesterase [Signal t	97.16
PRK11539	755	ComEC family competence protein; Provisional	97.13
TIGR00361	662	ComEC_Rec2 DNA internalization-related competence	97.13
COG2333	293	ComEC Predicted hydrolase (metallo-beta-lactamase	97.0
PF02112	335	PDEase_II: cAMP phosphodiesterases class-II; Inter	96.94
PRK11709	355	putative L-ascorbate 6-phosphate lactonase; Provis	96.69
KOG0813	265	consensus Glyoxylase [General function prediction	96.59
PF13483	163	Lactamase_B_3: Beta-lactamase superfamily domain;	96.36
COG2220	258	Predicted Zn-dependent hydrolases of the beta-lact	95.47
KOG1137	668	consensus mRNA cleavage and polyadenylation factor	94.75
KOG2121	746	consensus Predicted metal-dependent hydrolase (bet	94.16
COG2015	655	Alkyl sulfatase and related hydrolases [Secondary	92.31
KOG1135	764	consensus mRNA cleavage and polyadenylation factor	87.37
COG0426	388	FpaA Uncharacterized flavoproteins [Energy product	86.31
KOG1361	481	consensus Predicted hydrolase involved in interstr	80.24

>COG1234 ElaC Metal-dependent hydrolases of the beta-lactamase superfamily III [General function prediction only]

Probab=98.69  E-value=1.9e-08  Score=79.06  Aligned_cols=44  Identities=27%  Similarity=0.306  Sum_probs=36.7

Q ss_pred             CCCCCCCcCEEEeeccCchhhccHHHHHHHhcCCCcCCCcchhH
Q 041025           40 SPSRSISLNFLFTSHAHMDHIFTLLVLHIWRYSKNKFQPLKEKQ   83 (99)
Q Consensus        40 cp~~~~~id~IfITH~H~DHigGLp~l~~~r~~~~~~~Pl~~~~   83 (99)
                      ....+.+|++|||||.|.|||.|||.++..++..++..|+..-+
T Consensus        47 ~~~~~~~i~~IfITH~H~DHi~gL~~ll~~~~~~~~~~~l~iyg   90 (292)
T COG1234          47 AGLPPRKIDAIFITHLHGDHIAGLPGLLVSRSFRGRREPLKIYG   90 (292)
T ss_pred             hcCChhhccEEEeeccccchhcCcHHHHHHhhccCCCCceeEEC
Confidence            44455689999999999999999999999999988777665544

>PRK00055 ribonuclease Z; Reviewed

Probab=98.57  E-value=3.9e-08  Score=72.31  Aligned_cols=31  Identities=32%  Similarity=0.400  Sum_probs=25.9

Q ss_pred             CCCCcCEEEeeccCchhhccHHHHHHHhcCC
Q 041025           43 RSISLNFLFTSHAHMDHIFTLLVLHIWRYSK   73 (99)
Q Consensus        43 ~~~~id~IfITH~H~DHigGLp~l~~~r~~~   73 (99)
                      +..+||+|||||.|.||++||+.++..+...
T Consensus        50 ~~~~i~~i~lTH~H~DHi~Gl~~l~~~~~~~   80 (270)
T PRK00055         50 KPRKIDKIFITHLHGDHIFGLPGLLSTRSLS   80 (270)
T ss_pred             CHHHCCEEEEeCCCchhhCcHHHHHHHhhhc
Confidence            3457999999999999999999998766543

>TIGR02649 true_RNase_BN ribonuclease BN

Probab=98.56  E-value=4.1e-08  Score=75.69  Aligned_cols=31  Identities=35%  Similarity=0.376  Sum_probs=26.3

Q ss_pred             CCCCcCEEEeeccCchhhccHHHHHHHhcCC
Q 041025           43 RSISLNFLFTSHAHMDHIFTLLVLHIWRYSK   73 (99)
Q Consensus        43 ~~~~id~IfITH~H~DHigGLp~l~~~r~~~   73 (99)
                      ++.+||+|||||.|.||++|||.++..+...
T Consensus        51 ~~~~id~IfiTH~H~DHi~Gl~~ll~~~~~~   81 (303)
T TIGR02649        51 NPGKLDKIFISHLHGDHLFGLPGLLCSRSMS   81 (303)
T ss_pred             CHHHCcEEEEeCCChhhcCCHHHHHHHHHhc
Confidence            3467999999999999999999998776543

Members of this protein family are ribonuclease BN of Escherichia coli K-12 and closely related proteins believed to be equivalent in function. Note that E. coli appears to lack RNase Z per se, and this protein of E. coli appears orthologous to (but not functionally equivalent to) RNase Z of Bacillus subtilis and various other species. Meanwhile, the yihY gene product of E. coli previously was incorrectly identified as RNase BN.

>TIGR02651 RNase_Z ribonuclease Z

Probab=98.46  E-value=1e-07  Score=72.14  Aligned_cols=30  Identities=27%  Similarity=0.320  Sum_probs=25.5

Q ss_pred             CCCcCEEEeeccCchhhccHHHHHHHhcCC
Q 041025           44 SISLNFLFTSHAHMDHIFTLLVLHIWRYSK   73 (99)
Q Consensus        44 ~~~id~IfITH~H~DHigGLp~l~~~r~~~   73 (99)
                      ..++|+|||||.|.||++||+.++..+...
T Consensus        49 ~~~i~~IfiTH~H~DH~~Gl~~l~~~~~~~   78 (299)
T TIGR02651        49 PMKIDRIFITHLHGDHILGLPGLLSTMSFQ   78 (299)
T ss_pred             HHHCcEEEEECCchhhhcChHHHHHhhccC
Confidence            346899999999999999999998765543

Processing of the 3-prime end of tRNA precursors may be the result of endonuclease or exonuclease activity, and differs in different species. Member of this family are ribonuclease Z, a tRNA 3-prime endonuclease that processes tRNAs to prepare for addition of CCA. In species where all tRNA sequences already have the CCA tail, such as E. coli, the need for such an enzyme is unclear. Protein similar to the E. coli enzyme, matched by TIGR02649, are designated ribonuclease BN.

>COG1237 Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only]

Probab=98.40  E-value=1.9e-07  Score=74.59  Aligned_cols=31  Identities=23%  Similarity=0.095  Sum_probs=27.1

Q ss_pred             CCCCCCCcCEEEeeccCchhhccHHHHHHHh
Q 041025           40 SPSRSISLNFLFTSHAHMDHIFTLLVLHIWR   70 (99)
Q Consensus        40 cp~~~~~id~IfITH~H~DHigGLp~l~~~r   70 (99)
                      .+..+.+||+|+|||.|+||++||++++...
T Consensus        52 lgvd~~did~vvlSHgH~DH~GGL~~~~~~~   82 (259)
T COG1237          52 LGVDLRDIDAVVLSHGHYDHTGGLPYLLEEN   82 (259)
T ss_pred             cCCCcccCcEEEEeCCCccccCchHhHHhcc
Confidence            5666779999999999999999999887754

>PF00753 Lactamase_B: Metallo-beta-lactamase superfamily; InterPro: IPR001279 Apart from the beta-lactamases and metallo-beta-lactamases, a number of other proteins contain this domain []

Probab=98.29  E-value=3.4e-07  Score=60.95  Aligned_cols=30  Identities=27%  Similarity=0.164  Sum_probs=25.1

Q ss_pred             CCCCcCEEEeeccCchhhccHHHHHHHhcC
Q 041025           43 RSISLNFLFTSHAHMDHIFTLLVLHIWRYS   72 (99)
Q Consensus        43 ~~~~id~IfITH~H~DHigGLp~l~~~r~~   72 (99)
                      ...+|++||+||.|.||++|++.+......
T Consensus        40 ~~~~i~~vi~TH~H~DH~ggl~~~~~~~~~   69 (194)
T PF00753_consen   40 SGEDIDAVILTHAHPDHIGGLPELLEAGPV   69 (194)
T ss_dssp             TGGGEEEEEESSSSHHHHTTHHHHHHHTTE
T ss_pred             cCCCeEEEEECcccccccccccccccccce
Confidence            345789999999999999999999876443

These proteins include thiolesterases, members of the glyoxalase II family, that catalyse the hydrolysis of S-D-lactoyl-glutathione to form glutathione and D-lactic acid and a competence protein that is essential for natural transformation in Neisseria gonorrhoeae and could be a transporter involved in DNA uptake. Except for the competence protein these proteins bind two zinc ions per molecule as cofactor.; GO: 0016787 hydrolase activity; PDB: 3H3E_A 3Q6V_B 3SD9_B 3IOF_A 2GKL_A 1X8I_A 3FAI_A 2QDS_A 3IOG_A 3F9O_A ....

>COG0595 mRNA degradation ribonucleases J1/J2 (metallo-beta-lactamase superfamily) [Translation, ribosomal structure and biogenesis; Replication, recombination and repair]

Probab=98.26  E-value=4e-07  Score=78.50  Aligned_cols=32  Identities=25%  Similarity=0.201  Sum_probs=27.1

Q ss_pred             CCcCEEEeeccCchhhccHHHHHHHhcCCCcC
Q 041025           45 ISLNFLFTSHAHMDHIFTLLVLHIWRYSKNKF   76 (99)
Q Consensus        45 ~~id~IfITH~H~DHigGLp~l~~~r~~~~~~   76 (99)
                      .+|++|||||+|.||||++|+|+.......+|
T Consensus        65 ~kvkgI~lTHgHeDHIGaip~ll~~~~~~piy   96 (555)
T COG0595          65 DKVKGIFLTHGHEDHIGALPYLLKQVLFAPIY   96 (555)
T ss_pred             ccceEEEecCCchhhccchHHHHhcCCcCcee
Confidence            48999999999999999999999876644443

>PF12706 Lactamase_B_2: Beta-lactamase superfamily domain; PDB: 3BV6_F 1WW1_A 2E7Y_A 3RPC_D 3ZWF_A 3JXP_A 1XTO_A 2CBN_A 3G1P_B 3P2U_A

Probab=98.26  E-value=3.2e-07  Score=63.94  Aligned_cols=39  Identities=26%  Similarity=0.319  Sum_probs=29.2

Q ss_pred             CcCEEEeeccCchhhccHHHHHHHhcCC--CcCCCcchhHH
Q 041025           46 SLNFLFTSHAHMDHIFTLLVLHIWRYSK--NKFQPLKEKQK   84 (99)
Q Consensus        46 ~id~IfITH~H~DHigGLp~l~~~r~~~--~~~~Pl~~~~~   84 (99)
                      +||+|||||.|.||+.|++.+.......  .++.|....+.
T Consensus        29 ~id~v~iTH~H~DH~~gl~~l~~~~~~~~~~i~~~~~~~~~   69 (194)
T PF12706_consen   29 DIDAVFITHSHPDHIAGLPSLIPAWAKHPKPIYGPPETKEF   69 (194)
T ss_dssp             CEEEEE-SBSSHHHHTTHHHHHHHHHHCTTEEEECHHHHHH
T ss_pred             CCCEEEECCCCccccCChHHHHHHhhcccceEEecHHHHHH
Confidence            6899999999999999999998766554  35555544443

...

>TIGR02650 RNase_Z_T_toga ribonuclease Z, Thermotoga type

Probab=98.23  E-value=5.1e-07  Score=72.25  Aligned_cols=29  Identities=21%  Similarity=0.265  Sum_probs=24.7

Q ss_pred             CCCCCcCEEEeeccCchhhccHHHHHHHh
Q 041025           42 SRSISLNFLFTSHAHMDHIFTLLVLHIWR   70 (99)
Q Consensus        42 ~~~~~id~IfITH~H~DHigGLp~l~~~r   70 (99)
                      .....++.|||||+|+||++||+.++..+
T Consensus        36 ~k~~~l~~vFlTH~H~DHi~gL~~~~~~~   64 (277)
T TIGR02650        36 KKVAAFKVFFLHGGHDDHAAGLGGVNIIN   64 (277)
T ss_pred             hhHhhcCEEEeecCchhhhcchHHHHhhh
Confidence            44557899999999999999998887744

Members of this protein family are ribonuclease Z as found in the genus Thermotoga, where the enzyme cleaves after the CCA, in contrast to the activities characterized for other enzymes also designated ribonuclease Z. In other systems, cleavage occurs 5-prime to the location of the CCA sequence, and CCA is added subsequently. A species may lack ribonuclease Z if all tRNA genes encode the CCA sequence, or if the CCA is exposed by exonuclease activity rather than endonuclease activity. Note that members of this sequence family differ considerably from the majority of RNase Z sequences.

>PRK02113 putative hydrolase; Provisional

Probab=98.16  E-value=1.2e-06  Score=65.13  Aligned_cols=25  Identities=24%  Similarity=0.250  Sum_probs=22.2

Q ss_pred             CCCcCEEEeeccCchhhccHHHHHH
Q 041025           44 SISLNFLFTSHAHMDHIFTLLVLHI   68 (99)
Q Consensus        44 ~~~id~IfITH~H~DHigGLp~l~~   68 (99)
                      ..++|+|||||.|.||++||+.+..
T Consensus        64 ~~~id~I~lTH~H~DH~~gl~~l~~   88 (252)
T PRK02113         64 FGKIDAVLITHEHYDHVGGLDDLRP   88 (252)
T ss_pred             ccccCEEEECCCChhhhCCHHHHHH
Confidence            4579999999999999999998854

>smart00849 Lactamase_B Metallo-beta-lactamase superfamily

Probab=98.14  E-value=1.3e-06  Score=59.28  Aligned_cols=26  Identities=27%  Similarity=0.253  Sum_probs=23.1

Q ss_pred             CCCcCEEEeeccCchhhccHHHHHHH
Q 041025           44 SISLNFLFTSHAHMDHIFTLLVLHIW   69 (99)
Q Consensus        44 ~~~id~IfITH~H~DHigGLp~l~~~   69 (99)
                      ..+|++|||||.|.||++|++.+...
T Consensus        39 ~~~i~~i~iTH~H~DH~~g~~~~~~~   64 (183)
T smart00849       39 PKDIDAIILTHGHPDHIGGLPELLEA   64 (183)
T ss_pred             chhhcEEEecccCcchhccHHHHHhC
Confidence            34789999999999999999988776

Apart from the beta-lactamases a number of other proteins contain this domain PUBMED:7588620. These proteins include thiolesterases, members of the glyoxalase II family, that catalyse the hydrolysis of S-D-lactoyl-glutathione to form glutathione and D-lactic acid and a competence protein that is essential for natural transformation in Neisseria gonorrhoeae and could be a transporter involved in DNA uptake. Except for the competence protein these proteins bind two zinc ions per molecule as cofactor.

>TIGR00649 MG423 conserved hypothetical protein

Probab=98.13  E-value=1.4e-06  Score=70.42  Aligned_cols=36  Identities=19%  Similarity=0.086  Sum_probs=27.5

Q ss_pred             CCcCEEEeeccCchhhccHHHHHHHhcCCCcCCCcc
Q 041025           45 ISLNFLFTSHAHMDHIFTLLVLHIWRYSKNKFQPLK   80 (99)
Q Consensus        45 ~~id~IfITH~H~DHigGLp~l~~~r~~~~~~~Pl~   80 (99)
                      .++++|||||+|.||++|+|.++.......+|.|-.
T Consensus        57 ~~i~~I~iTH~H~DHiggl~~l~~~~~~~~Vy~~~~   92 (422)
T TIGR00649        57 DKVKGIFITHGHEDHIGAVPYLFHTVGFPPIYGTPL   92 (422)
T ss_pred             ccCCEEEECCCChHHhCcHHHHHHhCCCCeEEeCHH
Confidence            478999999999999999999986543233454433

Contains an ATP-binding domain at the N-terminal end of the protein. Possibly part of a superfamily of beta-lactmases

>PRK02126 ribonuclease Z; Provisional

Probab=98.11  E-value=2.3e-06  Score=68.75  Aligned_cols=28  Identities=29%  Similarity=0.450  Sum_probs=24.6

Q ss_pred             CCCCcCEEEeeccCchhhccHHHHHHHh
Q 041025           43 RSISLNFLFTSHAHMDHIFTLLVLHIWR   70 (99)
Q Consensus        43 ~~~~id~IfITH~H~DHigGLp~l~~~r   70 (99)
                      ...+|++|||||.|+||++|++.|+...
T Consensus        44 ~~~~i~~I~iTH~H~DHi~Gl~~l~~~~   71 (334)
T PRK02126         44 ELLRISHIFVSHTHMDHFIGFDRLLRHC   71 (334)
T ss_pred             CCCccCEEEEcCCChhHhCcHHHHHHHh
Confidence            3457899999999999999999998765

>PRK05184 pyrroloquinoline quinone biosynthesis protein PqqB; Provisional

Probab=98.08  E-value=2.1e-06  Score=67.45  Aligned_cols=23  Identities=22%  Similarity=0.378  Sum_probs=21.1

Q ss_pred             CCCcCEEEeeccCchhhccHHHH
Q 041025           44 SISLNFLFTSHAHMDHIFTLLVL   66 (99)
Q Consensus        44 ~~~id~IfITH~H~DHigGLp~l   66 (99)
                      ..+||+|||||.|.|||.||+.+
T Consensus        78 ~~~ldav~lTH~H~DHi~Gl~~l  100 (302)
T PRK05184         78 DTPIAAVVLTDGQIDHTTGLLTL  100 (302)
T ss_pred             cccccEEEEeCCchhhhhChHhh
Confidence            34799999999999999999988

>PRK11244 phnP carbon-phosphorus lyase complex accessory protein; Provisional

Probab=98.06  E-value=3.1e-06  Score=63.40  Aligned_cols=25  Identities=36%  Similarity=0.486  Sum_probs=21.7

Q ss_pred             CCCcCEEEeeccCchhhccHHHHHH
Q 041025           44 SISLNFLFTSHAHMDHIFTLLVLHI   68 (99)
Q Consensus        44 ~~~id~IfITH~H~DHigGLp~l~~   68 (99)
                      ..+||+|||||.|.||++||+.+..
T Consensus        64 ~~~i~~i~iTH~H~DHi~gl~~l~~   88 (250)
T PRK11244         64 PGSLQQILLTHYHMDHVQGLFPLRW   88 (250)
T ss_pred             cccCCEEEEccCchhhhccHHHHHh
Confidence            3579999999999999999987743

>TIGR03307 PhnP phosphonate metabolism protein PhnP

Probab=98.06  E-value=3.7e-06  Score=62.39  Aligned_cols=25  Identities=36%  Similarity=0.490  Sum_probs=21.5

Q ss_pred             CCCcCEEEeeccCchhhccHHHHHH
Q 041025           44 SISLNFLFTSHAHMDHIFTLLVLHI   68 (99)
Q Consensus        44 ~~~id~IfITH~H~DHigGLp~l~~   68 (99)
                      ..+||+|||||.|.||++||+.+..
T Consensus        54 ~~~id~i~iTH~H~DHi~gl~~l~~   78 (238)
T TIGR03307        54 PGSLQAILLTHYHMDHVQGLFPLRW   78 (238)
T ss_pred             ccCCCEEEEecCchhhhcchHHHHH
Confidence            3479999999999999999977643

This family of proteins found in operons encoding phosphonate C-P lyase systems as is observed in E. coli and is a member of the metallo-beta-lactamase superfamily (pfam00753). As defined by this model, all instances of this protein are associated with the C-P lyase, but not all genomes containing the C-P lyase system contain phnP.

>COG1235 PhnP Metal-dependent hydrolases of the beta-lactamase superfamily I [General function prediction only]

Probab=97.99  E-value=4.9e-06  Score=63.65  Aligned_cols=29  Identities=28%  Similarity=0.214  Sum_probs=24.4

Q ss_pred             CCcCEEEeeccCchhhccHHHHHHHhcCC
Q 041025           45 ISLNFLFTSHAHMDHIFTLLVLHIWRYSK   73 (99)
Q Consensus        45 ~~id~IfITH~H~DHigGLp~l~~~r~~~   73 (99)
                      ..+|+||+||.|.|||.|++.+.......
T Consensus        61 ~~idai~~TH~H~DHi~Gl~~l~~~~~~~   89 (269)
T COG1235          61 SDLDAILLTHEHSDHIQGLDDLRRAYTLP   89 (269)
T ss_pred             cccCeEEEecccHHhhcChHHHHHHhcCC
Confidence            37999999999999999999997644443

>TIGR02108 PQQ_syn_pqqB coenzyme PQQ biosynthesis protein B

Probab=97.98  E-value=4.5e-06  Score=66.11  Aligned_cols=26  Identities=23%  Similarity=0.319  Sum_probs=23.0

Q ss_pred             CCCCCcCEEEeeccCchhhccHHHHH
Q 041025           42 SRSISLNFLFTSHAHMDHIFTLLVLH   67 (99)
Q Consensus        42 ~~~~~id~IfITH~H~DHigGLp~l~   67 (99)
                      .....||+|||||.|.||+.||+.+.
T Consensus        75 l~~~~IdaI~lTH~H~DHi~GL~~L~  100 (302)
T TIGR02108        75 LRHTPIAGVVLTDGEIDHTTGLLTLR  100 (302)
T ss_pred             CCcccCCEEEEeCCCcchhhCHHHHc
Confidence            44668999999999999999999884

This model describes coenzyme PQQ biosynthesis protein B, a gene required for the biosynthesis of pyrrolo-quinoline-quinone (coenzyme PQQ). PQQ is required for some glucose dehydrogenases and alcohol dehydrogenases. Note that this gene appears to be required for PQQ in biosynthesis in Methylobacterium extorquens (under the name pqqG) and in Klebiella pneumoniae but that the equivalent pqqV in Acinetobacter calcoaceticus is not necessary for heterologous expression of PQQ biosynthesis in E. coli. Based on this latter finding, it is suggested (Goosen, et al. 1989) that PqqB might be a transporter or a PQQ-dependent enzyme rather than a PQQ biosynthesis enzyme.

>TIGR03675 arCOG00543 arCOG00543 universal archaeal KH-domain/beta-lactamase-domain protein

Probab=97.95  E-value=4.2e-06  Score=72.62  Aligned_cols=25  Identities=28%  Similarity=0.400  Sum_probs=22.6

Q ss_pred             CCcCEEEeeccCchhhccHHHHHHH
Q 041025           45 ISLNFLFTSHAHMDHIFTLLVLHIW   69 (99)
Q Consensus        45 ~~id~IfITH~H~DHigGLp~l~~~   69 (99)
                      .+||+|||||+|+||+|+||+++..
T Consensus       227 ~~IDaVlITHaH~DHiG~LP~L~k~  251 (630)
T TIGR03675       227 DELDAVVITHAHLDHSGLVPLLFKY  251 (630)
T ss_pred             HHCcEEEECCCCHHHHhhHHHHHHh
Confidence            4689999999999999999998754

This family of proteins is universal in the archaea and consistsof an N-terminal type-1 KH-domain (pfam00013) a central beta-lactamase-domain (pfam00753) with a C-terminal motif associated with RNA metabolism (pfam07521). KH-domains are associated with RNA-binding, so taken together, this protein is a likely metal-dependent RNAase. This family was defined in as arCOG01782.

>COG1236 YSH1 Predicted exonuclease of the beta-lactamase fold involved in RNA processing [Translation, ribosomal structure and biogenesis]

Probab=97.89  E-value=7.6e-06  Score=67.66  Aligned_cols=25  Identities=32%  Similarity=0.384  Sum_probs=22.9

Q ss_pred             CcCEEEeeccCchhhccHHHHHHHh
Q 041025           46 SLNFLFTSHAHMDHIFTLLVLHIWR   70 (99)
Q Consensus        46 ~id~IfITH~H~DHigGLp~l~~~r   70 (99)
                      .+|++||||+|+||+|+||++....
T Consensus        49 ~vDavllTHaHlDH~g~lp~l~~~~   73 (427)
T COG1236          49 KVDAVLLTHAHLDHIGALPYLVRNG   73 (427)
T ss_pred             CcCEEEeccCchhhhcccHHHHHhc
Confidence            5899999999999999999998754

>COG1782 Predicted metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH domain [General function prediction only]

Probab=97.85  E-value=6.9e-06  Score=71.88  Aligned_cols=27  Identities=33%  Similarity=0.543  Sum_probs=23.4

Q ss_pred             CcCEEEeeccCchhhccHHHHHHHhcC
Q 041025           46 SLNFLFTSHAHMDHIFTLLVLHIWRYS   72 (99)
Q Consensus        46 ~id~IfITH~H~DHigGLp~l~~~r~~   72 (99)
                      .+|+|+|||+|+||+|-||+|+..-..
T Consensus       234 ~lDAViiTHAHLDH~G~lP~LfkYgy~  260 (637)
T COG1782         234 ELDAVIITHAHLDHCGFLPLLFKYGYD  260 (637)
T ss_pred             ccceEEEeecccccccchhhhhhcCCC
Confidence            589999999999999999999865433

>COG0491 GloB Zn-dependent hydrolases, including glyoxylases [General function prediction only]

Probab=97.83  E-value=1e-05  Score=56.88  Aligned_cols=26  Identities=27%  Similarity=0.281  Sum_probs=22.7

Q ss_pred             CcCEEEeeccCchhhccHHHHHHHhc
Q 041025           46 SLNFLFTSHAHMDHIFTLLVLHIWRY   71 (99)
Q Consensus        46 ~id~IfITH~H~DHigGLp~l~~~r~   71 (99)
                      +|++|++||.|.||++|+..+.....
T Consensus        62 ~i~~vilTH~H~DH~gg~~~~~~~~~   87 (252)
T COG0491          62 DVDAILLTHGHFDHIGGAAVLKEAFG   87 (252)
T ss_pred             ChheeeecCCchhhhccHHHHHhhcC
Confidence            68999999999999999998865443

>KOG1136 consensus Predicted cleavage and polyadenylation specificity factor (CPSF subunit) [RNA processing and modification]

Probab=97.75  E-value=1.4e-05  Score=67.92  Aligned_cols=57  Identities=18%  Similarity=0.248  Sum_probs=37.9

Q ss_pred             CCcccchhhccccchhhhhhhcccceeeecceeeeeeccCCCCCCCcCEEEeeccCchhhccHHHHHHHhcC
Q 041025            1 MIDCSTAVELQNGHEAKEEEKSGRGMQVQGCKVEGLSIASPSRSISLNFLFTSHAHMDHIFTLLVLHIWRYS   72 (99)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~glSigcp~~~~~id~IfITH~H~DHigGLp~l~~~r~~   72 (99)
                      |+|||--|-..+.  ++-+.     |++       +|-+.+. -.-||.|.|||.|+||+|.||++-...+.
T Consensus        30 M~DCGMHMG~nD~--rRfPd-----FSy-------I~~~g~~-~~~idCvIIsHFHlDHcGaLPyfsEv~GY   86 (501)
T KOG1136|consen   30 MFDCGMHMGFNDD--RRFPD-----FSY-------ISKSGRF-TDAIDCVIISHFHLDHCGALPYFSEVVGY   86 (501)
T ss_pred             EEecccccccCcc--ccCCC-----cee-------ecCCCCc-ccceeEEEEeeecccccccccchHhhhCC
Confidence            7899998888776  33222     222       1111111 12589999999999999999999765544

>PRK10241 hydroxyacylglutathione hydrolase; Provisional

Probab=97.75  E-value=1.7e-05  Score=60.57  Aligned_cols=33  Identities=21%  Similarity=0.175  Sum_probs=26.1

Q ss_pred             CcCEEEeeccCchhhccHHHHHHHhcCCCcCCC
Q 041025           46 SLNFLFTSHAHMDHIFTLLVLHIWRYSKNKFQP   78 (99)
Q Consensus        46 ~id~IfITH~H~DHigGLp~l~~~r~~~~~~~P   78 (99)
                      .+++|++||.|.||++|+..+........++.|
T Consensus        45 ~l~~IllTH~H~DHigG~~~l~~~~~~~~V~~~   77 (251)
T PRK10241         45 QPEAIFLTHHHHDHVGGVKELVEKFPQIVVYGP   77 (251)
T ss_pred             ccCEEEeCCCCchhhccHHHHHHHCCCCEEEec
Confidence            468999999999999999999876544444544

>PRK00685 metal-dependent hydrolase; Provisional

Probab=97.75  E-value=1.6e-05  Score=57.83  Aligned_cols=24  Identities=17%  Similarity=0.461  Sum_probs=20.9

Q ss_pred             CCcCEEEeeccCchhhccHHHHHH
Q 041025           45 ISLNFLFTSHAHMDHIFTLLVLHI   68 (99)
Q Consensus        45 ~~id~IfITH~H~DHigGLp~l~~   68 (99)
                      .++|+|||||.|.||++++..++.
T Consensus        39 ~~id~vliTH~H~DH~~~~~~~~~   62 (228)
T PRK00685         39 VKVDYILLTHGHGDHLGDTVEIAK   62 (228)
T ss_pred             CcccEEEeCCCCccccccHHHHHH
Confidence            379999999999999999887653

>TIGR03413 GSH_gloB hydroxyacylglutathione hydrolase

Probab=97.71  E-value=1.9e-05  Score=60.15  Aligned_cols=25  Identities=24%  Similarity=0.234  Sum_probs=22.1

Q ss_pred             CcCEEEeeccCchhhccHHHHHHHh
Q 041025           46 SLNFLFTSHAHMDHIFTLLVLHIWR   70 (99)
Q Consensus        46 ~id~IfITH~H~DHigGLp~l~~~r   70 (99)
                      ++++||+||.|.||++|++.+....
T Consensus        43 ~l~~Il~TH~H~DHigG~~~l~~~~   67 (248)
T TIGR03413        43 TLTAILLTHHHHDHVGGVAELLEAF   67 (248)
T ss_pred             eeeEEEeCCCCccccCCHHHHHHHC
Confidence            4699999999999999999987654

Members of this protein family are hydroxyacylglutathione hydrolase, a detoxification enzyme known as glyoxalase II. It follows lactoylglutathione lyase, or glyoxalase I, and acts to remove the toxic metabolite methylglyoxal and related compounds. This protein belongs to the broader metallo-beta-lactamase family (pfam00753).

>PRK11921 metallo-beta-lactamase/flavodoxin domain-containing protein; Provisional

Probab=97.66  E-value=2.4e-05  Score=63.08  Aligned_cols=33  Identities=15%  Similarity=0.158  Sum_probs=26.1

Q ss_pred             CCcCEEEeeccCchhhccHHHHHHHhcCCCcCC
Q 041025           45 ISLNFLFTSHAHMDHIFTLLVLHIWRYSKNKFQ   77 (99)
Q Consensus        45 ~~id~IfITH~H~DHigGLp~l~~~r~~~~~~~   77 (99)
                      .+||+|++||.|.||++|++.++.......++.
T Consensus        68 ~~Id~IilTH~H~DHiggl~~l~~~~p~a~V~~  100 (394)
T PRK11921         68 DKIDYIVANHGEIDHSGALPELMKEIPDTPIYC  100 (394)
T ss_pred             ccCCEEEeCCCCCchhhHHHHHHHHCCCCEEEE
Confidence            479999999999999999999886544443443

>PLN02469 hydroxyacylglutathione hydrolase

Probab=97.63  E-value=2.8e-05  Score=60.23  Aligned_cols=31  Identities=16%  Similarity=0.193  Sum_probs=24.8

Q ss_pred             CcCEEEeeccCchhhccHHHHHHHhcCCCcC
Q 041025           46 SLNFLFTSHAHMDHIFTLLVLHIWRYSKNKF   76 (99)
Q Consensus        46 ~id~IfITH~H~DHigGLp~l~~~r~~~~~~   76 (99)
                      .|++|++||.|.||++|+..|........++
T Consensus        46 ~l~~Il~TH~H~DH~gG~~~l~~~~~~~~V~   76 (258)
T PLN02469         46 KIKLVLTTHHHWDHAGGNEKIKKLVPGIKVY   76 (258)
T ss_pred             cccEEEecCCCCccccCHHHHHHHCCCCEEE
Confidence            6899999999999999999987754333333

>PRK04286 hypothetical protein; Provisional

Probab=97.45  E-value=5.3e-05  Score=59.46  Aligned_cols=23  Identities=22%  Similarity=0.212  Sum_probs=19.7

Q ss_pred             CCCcCEEEeeccCchhhccHHHH
Q 041025           44 SISLNFLFTSHAHMDHIFTLLVL   66 (99)
Q Consensus        44 ~~~id~IfITH~H~DHigGLp~l   66 (99)
                      ..+||+|||||.|.|||.|+..+
T Consensus        63 ~~~id~IliTH~H~DHi~g~~~~   85 (298)
T PRK04286         63 AKKADVITISHYHYDHHTPFYED   85 (298)
T ss_pred             cccCCEEEecCCccccCCCcccc
Confidence            44799999999999999887654

>PRK05452 anaerobic nitric oxide reductase flavorubredoxin; Provisional

Probab=97.41  E-value=7.7e-05  Score=62.47  Aligned_cols=26  Identities=23%  Similarity=0.292  Sum_probs=23.3

Q ss_pred             CCcCEEEeeccCchhhccHHHHHHHh
Q 041025           45 ISLNFLFTSHAHMDHIFTLLVLHIWR   70 (99)
Q Consensus        45 ~~id~IfITH~H~DHigGLp~l~~~r   70 (99)
                      .+|++|++||.|.||++|++.++...
T Consensus        70 ~~Id~IilTH~H~DH~Ggl~~Ll~~~   95 (479)
T PRK05452         70 ADIDYIVINHAEEDHAGALTELMAQI   95 (479)
T ss_pred             hhCCEEEeCCCCcchhchHHHHHHHC
Confidence            47999999999999999999998653

>PLN02398 hydroxyacylglutathione hydrolase

Probab=97.22  E-value=0.00021  Score=57.99  Aligned_cols=26  Identities=27%  Similarity=0.376  Sum_probs=23.0

Q ss_pred             CCcCEEEeeccCchhhccHHHHHHHh
Q 041025           45 ISLNFLFTSHAHMDHIFTLLVLHIWR   70 (99)
Q Consensus        45 ~~id~IfITH~H~DHigGLp~l~~~r   70 (99)
                      .+|++|++||.|.||++|+..|....
T Consensus       120 ~~L~~ILlTH~H~DH~GG~~~L~~~~  145 (329)
T PLN02398        120 RNLTYILNTHHHYDHTGGNLELKARY  145 (329)
T ss_pred             CCceEEEECCCCchhhCCHHHHHHhc
Confidence            47899999999999999999987653

>PLN02962 hydroxyacylglutathione hydrolase

Probab=97.18  E-value=0.00018  Score=55.87  Aligned_cols=24  Identities=25%  Similarity=0.380  Sum_probs=21.7

Q ss_pred             CcCEEEeeccCchhhccHHHHHHH
Q 041025           46 SLNFLFTSHAHMDHIFTLLVLHIW   69 (99)
Q Consensus        46 ~id~IfITH~H~DHigGLp~l~~~   69 (99)
                      .|.+|++||.|.||++|++.+...
T Consensus        61 ~i~~Il~TH~H~DHigg~~~l~~~   84 (251)
T PLN02962         61 KLIYAMNTHVHADHVTGTGLLKTK   84 (251)
T ss_pred             eeEEEEcCCCCchhHHHHHHHHHH
Confidence            678999999999999999998764

>COG5212 PDE1 Low-affinity cAMP phosphodiesterase [Signal transduction mechanisms]

Probab=97.16  E-value=9.4e-05  Score=61.22  Aligned_cols=52  Identities=33%  Similarity=0.410  Sum_probs=38.5

Q ss_pred             cccchhhccccchhhhhhhcccceeeecceeeeeeccCCCCCCCcCEEEeeccCchhhccHH
Q 041025            3 DCSTAVELQNGHEAKEEEKSGRGMQVQGCKVEGLSIASPSRSISLNFLFTSHAHMDHIFTLL   64 (99)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~glSigcp~~~~~id~IfITH~H~DHigGLp   64 (99)
                      +-+...+++.+|.++-+..+..-.--+||-+..          .|..-||||+|+|||.|+-
T Consensus        79 ~~g~s~~l~~~~~~~~e~~~~A~~~~~~y~~~Q----------~I~~y~ITH~HLDHIsGlV  130 (356)
T COG5212          79 LPGISRALEKGHFAAIEDAMAAPLTRQGYIFRQ----------SINSYFITHAHLDHISGLV  130 (356)
T ss_pred             ccchHHHHHhhhhhhhhhhhhcchhhhhhhhhh----------hhhheEeccccccchhcee
Confidence            445566777777777666666666666666554          6899999999999999973

>PRK11539 ComEC family competence protein; Provisional

Probab=97.13  E-value=0.00027  Score=61.96  Aligned_cols=34  Identities=26%  Similarity=0.109  Sum_probs=28.2

Q ss_pred             CcCEEEeeccCchhhccHHHHHHHhcCCCcCCCc
Q 041025           46 SLNFLFTSHAHMDHIFTLLVLHIWRYSKNKFQPL   79 (99)
Q Consensus        46 ~id~IfITH~H~DHigGLp~l~~~r~~~~~~~Pl   79 (99)
                      ++|+|+|||.|.||++|++.++........+.|.
T Consensus       551 ~lD~lilSH~d~DH~GGl~~Ll~~~~~~~i~~~~  584 (755)
T PRK11539        551 TPEGIILSHEHLDHRGGLASLLHAWPMAWIRSPL  584 (755)
T ss_pred             CcCEEEeCCCCcccCCCHHHHHHhCCcceeeccC
Confidence            5899999999999999999998876555555554

>TIGR00361 ComEC_Rec2 DNA internalization-related competence protein ComEC/Rec2

Probab=97.13  E-value=0.00025  Score=61.13  Aligned_cols=34  Identities=29%  Similarity=0.232  Sum_probs=27.5

Q ss_pred             CcCEEEeeccCchhhccHHHHHHHhcCCCcCCCc
Q 041025           46 SLNFLFTSHAHMDHIFTLLVLHIWRYSKNKFQPL   79 (99)
Q Consensus        46 ~id~IfITH~H~DHigGLp~l~~~r~~~~~~~Pl   79 (99)
                      +||+|+|||.|.||++|++.++....-.+.+.|-
T Consensus       490 ~ID~lilTH~d~DHiGGl~~ll~~~~v~~i~~~~  523 (662)
T TIGR00361       490 KLEALILSHADQDHIGGAEIILKHHPVKRLVIPK  523 (662)
T ss_pred             CcCEEEECCCchhhhCcHHHHHHhCCccEEEecc
Confidence            3899999999999999999998775555555443

The role for this protein in species that are not naturally transformable is unknown.

>COG2333 ComEC Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only]

Probab=97.00  E-value=0.0004  Score=55.88  Aligned_cols=30  Identities=23%  Similarity=0.092  Sum_probs=25.3

Q ss_pred             CCcCEEEeeccCchhhccHHHHHHHhcCCC
Q 041025           45 ISLNFLFTSHAHMDHIFTLLVLHIWRYSKN   74 (99)
Q Consensus        45 ~~id~IfITH~H~DHigGLp~l~~~r~~~~   74 (99)
                      .+||.+++||.|.||+||++.++....-.+
T Consensus        89 ~~iD~lIlTH~d~DHiGg~~~vl~~~~v~~  118 (293)
T COG2333          89 RKLDQLILTHPDADHIGGLDEVLKTIKVPE  118 (293)
T ss_pred             ccccEEEeccCCccccCCHHHHHhhCCCCc
Confidence            369999999999999999999998544433

>PF02112 PDEase_II: cAMP phosphodiesterases class-II; InterPro: IPR000396 Cyclic-AMP phosphodiesterase (3

Probab=96.94  E-value=0.00028  Score=57.71  Aligned_cols=19  Identities=32%  Similarity=0.585  Sum_probs=17.7

Q ss_pred             CcCEEEeeccCchhhccHH
Q 041025           46 SLNFLFTSHAHMDHIFTLL   64 (99)
Q Consensus        46 ~id~IfITH~H~DHigGLp   64 (99)
                      .|...||||+|+|||.||-
T Consensus        79 ~I~~ylItH~HLDHi~gLv   97 (335)
T PF02112_consen   79 HIKGYLITHPHLDHIAGLV   97 (335)
T ss_pred             hhheEEecCCchhhHHHHH
Confidence            7899999999999999984

1.4.17 from EC) (PDE) catalyses the hydrolysis of cAMP to the corresponding nucleoside 5' monophosphate. On the basis of sequence similarity, most PDEs can be grouped together [], but some enzymes lie apart from the main family and represent a second distinct class [] that includes PDEs from Dictyostelium and yeast. This entry contains class-II cyclic-AMP phosphodiesterases.; GO: 0004115 3',5'-cyclic-AMP phosphodiesterase activity, 0006198 cAMP catabolic process

>PRK11709 putative L-ascorbate 6-phosphate lactonase; Provisional

Probab=96.69  E-value=0.00071  Score=55.22  Aligned_cols=18  Identities=28%  Similarity=0.466  Sum_probs=15.9

Q ss_pred             CCCcCEEEeeccCchhhc
Q 041025           44 SISLNFLFTSHAHMDHIF   61 (99)
Q Consensus        44 ~~~id~IfITH~H~DHig   61 (99)
                      ...||+|||||.|.||+.
T Consensus       107 i~~IDaVLiTH~H~DHlD  124 (355)
T PRK11709        107 IREIDAVLATHDHSDHID  124 (355)
T ss_pred             CCCCCEEEECCCcccccC
Confidence            457999999999999983

>KOG0813 consensus Glyoxylase [General function prediction only]

Probab=96.59  E-value=0.0012  Score=52.92  Aligned_cols=27  Identities=22%  Similarity=0.142  Sum_probs=24.0

Q ss_pred             CCCCcCEEEeeccCchhhccHHHHHHH
Q 041025           43 RSISLNFLFTSHAHMDHIFTLLVLHIW   69 (99)
Q Consensus        43 ~~~~id~IfITH~H~DHigGLp~l~~~   69 (99)
                      ...++.+||.||-|+||+||+..+...
T Consensus        48 ~~~~l~~Il~THhH~DHsGGn~~i~~~   74 (265)
T KOG0813|consen   48 ENRRLTAILTTHHHYDHSGGNEDIKRE   74 (265)
T ss_pred             ccCceeEEEeccccccccCcHHHHHhh
Confidence            345889999999999999999999776

>PF13483 Lactamase_B_3: Beta-lactamase superfamily domain; PDB: 1VJN_B 3KL7_A

Probab=96.36  E-value=0.0017  Score=45.52  Aligned_cols=19  Identities=26%  Similarity=0.370  Sum_probs=14.7

Q ss_pred             CCCcCEEEeeccCchhhcc
Q 041025           44 SISLNFLFTSHAHMDHIFT   62 (99)
Q Consensus        44 ~~~id~IfITH~H~DHigG   62 (99)
                      ..++|+|||||.|.||+.-
T Consensus        34 ~~~~D~IlisH~H~DH~~~   52 (163)
T PF13483_consen   34 PPKADAILISHSHPDHFDP   52 (163)
T ss_dssp             S-B-SEEEESSSSTTT-CC
T ss_pred             cCCCCEEEECCCccccCCh
Confidence            5689999999999999876

>COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold [General function prediction only]

Probab=95.47  E-value=0.0073  Score=45.54  Aligned_cols=21  Identities=19%  Similarity=0.444  Sum_probs=17.4

Q ss_pred             CCCcCEEEeeccCchhhccHH
Q 041025           44 SISLNFLFTSHAHMDHIFTLL   64 (99)
Q Consensus        44 ~~~id~IfITH~H~DHigGLp   64 (99)
                      ...+|+|+|||.|.||+..--
T Consensus        50 ~~~~D~ilitH~H~DHl~~~~   70 (258)
T COG2220          50 LPPIDYILITHDHYDHLDDET   70 (258)
T ss_pred             cCCCCEEEEeCCCccccCHHH
Confidence            446999999999999997543

>KOG1137 consensus mRNA cleavage and polyadenylation factor II complex, BRR5 (CPSF subunit) [RNA processing and modification]

Probab=94.75  E-value=0.0038  Score=55.44  Aligned_cols=33  Identities=18%  Similarity=0.125  Sum_probs=27.3

Q ss_pred             CCCCCcCEEEeeccCchhhccHHHHHHHhcCCC
Q 041025           42 SRSISLNFLFTSHAHMDHIFTLLVLHIWRYSKN   74 (99)
Q Consensus        42 ~~~~~id~IfITH~H~DHigGLp~l~~~r~~~~   74 (99)
                      .+...||.++|||.|+||++.||+++..-...+
T Consensus        61 vd~s~id~llIthFhldh~aslp~~~qkTsf~g   93 (668)
T KOG1137|consen   61 VDLSAIDPLLITHFHLDHAASLPFTLQKTSFIG   93 (668)
T ss_pred             cccccccHHHHhhhhhhhcccccceeeeccccc
Confidence            445689999999999999999999986655544

>KOG2121 consensus Predicted metal-dependent hydrolase (beta-lactamase superfamily) [General function prediction only]

Probab=94.16  E-value=0.0074  Score=54.45  Aligned_cols=30  Identities=30%  Similarity=0.319  Sum_probs=25.5

Q ss_pred             CCcCEEEeeccCchhhccHHHHHHHhcCCC
Q 041025           45 ISLNFLFTSHAHMDHIFTLLVLHIWRYSKN   74 (99)
Q Consensus        45 ~~id~IfITH~H~DHigGLp~l~~~r~~~~   74 (99)
                      .++.+|||||.|.||..||+.++..+....
T Consensus       500 r~LraI~ISHlHADHh~Gl~~vL~~r~k~~  529 (746)
T KOG2121|consen  500 RKLRAIFISHLHADHHLGLISVLQARTKLL  529 (746)
T ss_pred             HhHHHHHHHhhcccccccHHHHHHHHHHhc
Confidence            367899999999999999999998765543

>COG2015 Alkyl sulfatase and related hydrolases [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=92.31  E-value=0.061  Score=47.76  Aligned_cols=27  Identities=15%  Similarity=0.070  Sum_probs=23.0

Q ss_pred             CCCcCEEEeeccCchhhccHHHHHHHh
Q 041025           44 SISLNFLFTSHAHMDHIFTLLVLHIWR   70 (99)
Q Consensus        44 ~~~id~IfITH~H~DHigGLp~l~~~r   70 (99)
                      ...|.+|+-||+|.||.||.-+++...
T Consensus       162 ~rPV~aVIYtHsH~DHfGGVkGiv~ea  188 (655)
T COG2015         162 QRPVVAVIYTHSHSDHFGGVKGIVSEA  188 (655)
T ss_pred             CCCeEEEEeecccccccCCeeeccCHH
Confidence            346899999999999999999997543

>KOG1135 consensus mRNA cleavage and polyadenylation factor II complex, subunit CFT2 (CPSF subunit) [RNA processing and modification]

Probab=87.37  E-value=0.34  Score=44.16  Aligned_cols=33  Identities=12%  Similarity=0.012  Sum_probs=27.5

Q ss_pred             CCcCEEEeeccCchhhccHHHHHHHhcCC-CcCC
Q 041025           45 ISLNFLFTSHAHMDHIFTLLVLHIWRYSK-NKFQ   77 (99)
Q Consensus        45 ~~id~IfITH~H~DHigGLp~l~~~r~~~-~~~~   77 (99)
                      ..||+|+|||.-.=|+|||||.+...+.. .+|.
T Consensus        50 ~~iDaILLShpd~~hlGaLpY~~~k~gl~~~VYA   83 (764)
T KOG1135|consen   50 PTIDAILLSHPDILHLGALPYAVGKLGLNAPVYA   83 (764)
T ss_pred             ccccEEEecCCChHHhccchhhHhhCCccceEEE
Confidence            37999999999999999999998776665 4444

>COG0426 FpaA Uncharacterized flavoproteins [Energy production and conversion]

Probab=86.31  E-value=0.53  Score=39.79  Aligned_cols=30  Identities=17%  Similarity=0.207  Sum_probs=25.3

Q ss_pred             CCCCcCEEEeeccCchhhccHHHHHHHhcC
Q 041025           43 RSISLNFLFTSHAHMDHIFTLLVLHIWRYS   72 (99)
Q Consensus        43 ~~~~id~IfITH~H~DHigGLp~l~~~r~~   72 (99)
                      .+.+||+|+++|.--||+|+|+.++.....
T Consensus        69 d~k~iDYIi~~H~ePDhsg~l~~ll~~~p~   98 (388)
T COG0426          69 DPKEIDYIIVNHTEPDHSGSLPELLELAPN   98 (388)
T ss_pred             ChhcCeEEEECCCCcchhhhHHHHHHhCCC
Confidence            355699999999999999999999865543

>KOG1361 consensus Predicted hydrolase involved in interstrand cross-link repair [Replication, recombination and repair]

Probab=80.24  E-value=0.78  Score=39.90  Aligned_cols=20  Identities=35%  Similarity=0.411  Sum_probs=17.1

Q ss_pred             CcCEEEeeccCchhhccHHH
Q 041025           46 SLNFLFTSHAHMDHIFTLLV   65 (99)
Q Consensus        46 ~id~IfITH~H~DHigGLp~   65 (99)
                      ...+-|+||.|.||..||..
T Consensus       112 ~~s~yFLsHFHSDHy~GL~~  131 (481)
T KOG1361|consen  112 GCSAYFLSHFHSDHYIGLTK  131 (481)
T ss_pred             ccceeeeecccccccccccc
Confidence            45788999999999999853

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	99
2cbn_A	306	Ribonuclease Z; phosphodiesterase beta lactamase t	98.39
1y44_A	320	Ribonuclease Z; zinc-dependent metal hydrolase, hy	98.28
2e7y_A	280	TRNAse Z; tRNA maturation, metallo-beta-lactaMSe,	98.28
3dha_A	254	N-acyl homoserine lactone hydrolase; zinc bimetall	98.25
3zwf_A	368	Zinc phosphodiesterase ELAC protein 1; beta-lactam	98.21
3iek_A	431	Ribonuclease TTHA0252; metallo beta lactamase fold	98.21
3adr_A	261	Putative uncharacterized protein ST1585; quorum se	98.11
1zkp_A	268	Hypothetical protein BA1088; zinc binding protein,	98.08
2r2d_A	276	AGR_PTI_140P, Zn-dependent hydrolases; lactonase,	98.06
3m8t_A	294	'BLR6230 protein; subclass B3 beta-lactamase, zinc	98.06
3md7_A	293	Beta-lactamase-like; ssgcid, hydrolase, structural	98.06
2i7t_A	459	Cleavage and polyadenylation specificity factor 73	98.06
1sml_A	269	Protein (penicillinase); metallo-beta-lactamase, a	98.05
3esh_A	280	Protein similar to metal-dependent hydrolase; stru	98.04
1k07_A	263	FEZ-1 beta-lactamase; monomer with alpha-beta/BETA	98.03
3l6n_A	219	Metallo-beta-lactamase; zinc, hydolase, antibiotic	98.03
2ycb_A	636	Beta-CAsp RNAse, cleavage and polyadenylation spec	98.02
2zwr_A	207	Metallo-beta-lactamase superfamily protein; hydrol	98.02
2p4z_A	284	Metal-dependent hydrolases of the beta-lactamase s	98.01
3q6v_A	233	Beta-lactamase; metalloenzyme, alpha-beta, hydrola	98.0
3iog_A	227	Beta-lactamase; hydrolase, antibiotic resistance,	98.0
4ax1_B	303	Metallo-beta-lactamase AIM-1; hydrolase, antibioti	98.0
2az4_A	429	Hypothetical protein EF2904; structural genomics,	97.99
3aj3_A	274	MLR6805 protein, 4-pyridoxolactonase; Zn-protein,	97.97
1e5d_A	402	Rubredoxin\:oxygen oxidoreductase; oxygenreductase	97.97
1ycg_A	398	Nitric oxide reductase; DIIRON site, oxidoreductas	97.97
4hl2_A	243	Beta-lactamase NDM-1; structural genomics, PSI-bio	97.96
3bk2_A	562	RNAse J, metal dependent hydrolase; endoribonuclea	97.95
3zdk_A	336	5' exonuclease apollo; hydrolase; HET: TLA; 2.16A	97.95
2xr1_A	640	Cleavage and polyadenylation specificity factor 1	97.94
3af5_A	651	Putative uncharacterized protein PH1404; archaeal	97.93
2xf4_A	210	Hydroxyacylglutathione hydrolase; HET: PG4; 2.30A	97.93
2ohh_A	404	Type A flavoprotein FPRA; beta-lactamase like doma	97.93
1mqo_A	227	Beta-lactamase II; alpha-beta/BETA-alpha fold, hyd	97.92
1m2x_A	223	Class B carbapenemase BLAB-1; alpha-beta/BETA-alph	97.91
2zo4_A	317	Metallo-beta-lactamase family protein; hydrolase;	97.9
4ad9_A	289	Lactb2, beta-lactamase-like protein 2; hydrolase,	97.9
2i7x_A	717	Protein CFT2; polyadenylation, metallo-B-lactamase	97.9
3g1p_A	258	Protein PHNP; C-P lyase, phosphodiesterase, phosph	97.89
3hnn_A	262	Putative diflavin flavoprotein A 5; PSI-2, protein	97.88
2bib_A	547	CBPE, teichoic acid phosphorylcholine esterase/ ch	97.87
2vw8_A	303	PA1000, PQSE; quinolone signal response protein, s	97.86
3zq4_A	555	Ribonuclease J 1, RNAse J1; hydrolase, RNA maturat	97.86
1a7t_A	232	Metallo-beta-lactamase; hydrolase (beta-lactamase)	97.85
1ztc_A	221	Hypothetical protein TM0894; structural genomics,	97.85
2q9u_A	414	A-type flavoprotein; flavodoxin like, beta lactama	97.81
1xm8_A	254	Glyoxalase II; structural genomics, protein struct	97.79
2qed_A	258	Hydroxyacylglutathione hydrolase; metallo-B- super	97.78
1jjt_A	228	IMP-1 metallo beta-lactamase; metallo-beta-lactama	97.77
1qh5_A	260	Glyoxalase II, protein (hydroxyacylglutathione hyd	97.77
3jxp_A	321	Coenzyme PQQ synthesis protein B; alpha-beta prote	97.76
1p9e_A	331	Methyl parathion hydrolase; Zn containing; 2.40A {	97.74
2y8b_A	265	Metallo-B-lactamase; hydrolase, cephalosporins, an	97.73
2gcu_A	245	Putative hydroxyacylglutathione hydrolase 3; ethyl	97.72
4b87_A	367	DNA cross-LINK repair 1A protein; dclre1A, DCLRE,	97.72
4efz_A	298	Metallo-beta-lactamase family protein; structural	97.69
2p18_A	311	Glyoxalase II; metalloprotein, beta sandwich, alph	97.65
4eyb_A	270	Beta-lactamase NDM-1; metallo beta lactamase, anti	97.62
3rpc_A	264	Possible metal-dependent hydrolase; structural gen	97.61
2fhx_A	246	SPM-1; metallo-beta-lactamase, dinuclear zinc, ant	97.55
2wyl_A	360	L-ascorbate-6-phosphate lactonase ULAG; hydrolase;	97.5
3tp9_A	474	Beta-lactamase and rhodanese domain protein; struc	97.49
3bv6_A	379	Metal-dependent hydrolase; metallo protein, beta-l	97.47
1vjn_A	220	Zn-dependent hydrolase of metallo-beta-lactamase s	97.43
4dik_A	410	Flavoprotein; TM0755, electron transport, DI-iron	97.36
3r2u_A	466	Metallo-beta-lactamase family protein; structural	97.33
3kl7_A	235	Putative metal-dependent hydrolase; structural gen	97.32
3h3e_A	267	Uncharacterized protein TM1679; structural genomic	97.14
2cfu_A	658	SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1	96.99
2yhe_A	668	SEC-alkyl sulfatase; hydrolase, inversion, metallo	95.83
2p97_A	201	Hypothetical protein; putative metal-dependent hyd	96.31

>2cbn_A Ribonuclease Z; phosphodiesterase beta lactamase tRNAse Z, hydrolase, metal- binding, endonuclease, tRNA processing, zinc; 2.9A {Escherichia coli} SCOP: d.157.1.7

Probab=98.39  E-value=1.3e-07  Score=69.25  Aligned_cols=29  Identities=38%  Similarity=0.417  Sum_probs=24.9

Q ss_pred             CCCCcCEEEeeccCchhhccHHHHHHHhc
Q 041025           43 RSISLNFLFTSHAHMDHIFTLLVLHIWRY   71 (99)
Q Consensus        43 ~~~~id~IfITH~H~DHigGLp~l~~~r~   71 (99)
                      ...+||+|||||.|.||++|++.++..+.
T Consensus        54 ~~~~i~~i~iTH~H~DH~~gl~~l~~~~~   82 (306)
T 2cbn_A           54 NPGKLDKIFISHLHGDHLFGLPGLLCSRS   82 (306)
T ss_dssp             CTTTEEEEECSCCCHHHHTTHHHHHHHHH
T ss_pred             CHHHcCEEEEecCCchhhCChHHHHHHHH
Confidence            34578999999999999999999987543

>1y44_A Ribonuclease Z; zinc-dependent metal hydrolase, hydrolase; HET: MES; 2.10A {Bacillus subtilis} SCOP: d.157.1.7 PDB: 2fk6_A*

Probab=98.28  E-value=2.9e-07  Score=68.18  Aligned_cols=27  Identities=30%  Similarity=0.399  Sum_probs=24.0

Q ss_pred             CCCcCEEEeeccCchhhccHHHHHHHh
Q 041025           44 SISLNFLFTSHAHMDHIFTLLVLHIWR   70 (99)
Q Consensus        44 ~~~id~IfITH~H~DHigGLp~l~~~r   70 (99)
                      ..+||+|||||.|.||++|++.++..+
T Consensus        53 ~~~i~~I~iTH~H~DH~~gl~~l~~~~   79 (320)
T 1y44_A           53 PRKIEKIFITHMHGDHVYGLPGLLGSR   79 (320)
T ss_dssp             GGGEEEEECSBCCGGGTTTHHHHHHHH
T ss_pred             HHHcCEEEEeCCChhhhCCHHHHHHHH
Confidence            447899999999999999999998765

>2e7y_A TRNAse Z; tRNA maturation, metallo-beta-lactaMSe, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.97A {Thermotoga maritima} SCOP: d.157.1.7 PDB: 1ww1_A

Probab=98.28  E-value=2.8e-07  Score=66.15  Aligned_cols=26  Identities=27%  Similarity=0.474  Sum_probs=22.9

Q ss_pred             CCCcCEEEeeccCchhhccHHHHHHH
Q 041025           44 SISLNFLFTSHAHMDHIFTLLVLHIW   69 (99)
Q Consensus        44 ~~~id~IfITH~H~DHigGLp~l~~~   69 (99)
                      ..+|++|||||+|.||++|++.++..
T Consensus        38 ~~~i~~IliTH~H~DH~~gl~~l~~~   63 (280)
T 2e7y_A           38 VYAFKYVFLTHGHVDHIAGLWGVVNI   63 (280)
T ss_dssp             GGGCCEEECSCCCHHHHTTHHHHHHH
T ss_pred             ccCCCEEEEeCCchhHHCCHHHHHHH
Confidence            34689999999999999999999754

>3dha_A N-acyl homoserine lactone hydrolase; zinc bimetallohydrolase, quorum quenching; HET: C6L GOL; 0.95A {Bacillus thuringiensis serovar kurstakorganism_taxid} PDB: 3dhb_A* 3dhc_A* 2a7m_A* 2br6_A 2btn_A

Probab=98.25  E-value=2e-07  Score=66.62  Aligned_cols=23  Identities=26%  Similarity=0.312  Sum_probs=20.3

Q ss_pred             CCCcCEEEeeccCchhhccHHHH
Q 041025           44 SISLNFLFTSHAHMDHIFTLLVL   66 (99)
Q Consensus        44 ~~~id~IfITH~H~DHigGLp~l   66 (99)
                      +.+|++|||||+|.||++|++.+
T Consensus        98 ~~~I~~VilTH~H~DH~gg~~~~  120 (254)
T 3dha_A           98 PDDLLYIISSHLHFDHAGGNGAF  120 (254)
T ss_dssp             GGGCSEEECSCCSHHHHTTGGGC
T ss_pred             HHHCCEEEcCCChhhcCCChHHC
Confidence            33589999999999999999876

>3zwf_A Zinc phosphodiesterase ELAC protein 1; beta-lactamase, hydrolase, metal-binding, tRNA processing, zinc-binding, catabolism; 1.70A {Homo sapiens}

Probab=98.21  E-value=5e-07  Score=70.55  Aligned_cols=29  Identities=28%  Similarity=0.304  Sum_probs=25.1

Q ss_pred             CCCCcCEEEeeccCchhhccHHHHHHHhc
Q 041025           43 RSISLNFLFTSHAHMDHIFTLLVLHIWRY   71 (99)
Q Consensus        43 ~~~~id~IfITH~H~DHigGLp~l~~~r~   71 (99)
                      ++.+||+|||||.|.||++|++.++..+.
T Consensus        49 ~~~~id~I~iTH~H~DHi~gl~~l~~~~~   77 (368)
T 3zwf_A           49 KAGRITKIFITHLHGDHFFGLPGLLCTIS   77 (368)
T ss_dssp             CGGGEEEEECCCSSGGGTTTHHHHHHHHH
T ss_pred             ChHHCCEEEECCCChHHhCcHHHHHHHhh
Confidence            34579999999999999999999987653

>3iek_A Ribonuclease TTHA0252; metallo beta lactamase fold, endonuclease, hydrolase, metal- nuclease, RNA-binding, rRNA processing; HET: FLC; 2.05A {Thermus thermophilus} SCOP: d.157.1.10 PDB: 2dkf_A* 3iel_A* 3iem_A* 2zdf_A* 3idz_A* 2zdd_A* 3ie0_A* 2zde_A* 3ie1_A* 2zdw_A* 3a4y_A* 2yvd_A* 3ie2_A*

Probab=98.21  E-value=4.3e-07  Score=72.12  Aligned_cols=38  Identities=21%  Similarity=0.282  Sum_probs=28.5

Q ss_pred             CCCCcCEEEeeccCchhhccHHHHHHHhcCCCcCCCcc
Q 041025           43 RSISLNFLFTSHAHMDHIFTLLVLHIWRYSKNKFQPLK   80 (99)
Q Consensus        43 ~~~~id~IfITH~H~DHigGLp~l~~~r~~~~~~~Pl~   80 (99)
                      ...+||+|||||+|.||++|+|.+........+|.+..
T Consensus        48 ~~~~Id~VllTH~H~DH~gglp~l~~~~~~~~Iy~t~~   85 (431)
T 3iek_A           48 DPKEVDAVLLTHAHLDHVGRLPKLFREGYRGPVYATRA   85 (431)
T ss_dssp             CGGGCCEEECSCCCHHHHTTHHHHHHTTCCSCEEECHH
T ss_pred             CcccCCEEEECCCChHHhccHHHHHHcCCCCeEEEcHH
Confidence            34578999999999999999999987533344454433

>3adr_A Putative uncharacterized protein ST1585; quorum sensing, quinolone signal, metallo-beta-lactamase FOL conserved hypothetical protein; HET: EPE; 1.80A {Sulfolobus tokodaii}

Probab=98.11  E-value=1.5e-06  Score=61.87  Aligned_cols=26  Identities=31%  Similarity=0.354  Sum_probs=23.1

Q ss_pred             CCCcCEEEeeccCchhhccHHHHHHH
Q 041025           44 SISLNFLFTSHAHMDHIFTLLVLHIW   69 (99)
Q Consensus        44 ~~~id~IfITH~H~DHigGLp~l~~~   69 (99)
                      ..+|++||+||.|.||++|++.+...
T Consensus        48 ~~~i~~vi~TH~H~DH~gg~~~l~~~   73 (261)
T 3adr_A           48 LDKLDYIVLTHLHIDHIGLLPELLQV   73 (261)
T ss_dssp             CSCCCEEECSCCSGGGTTTHHHHHHH
T ss_pred             CCCCcEEEECCCCccccCCHHHHHHH
Confidence            35789999999999999999998765

>1zkp_A Hypothetical protein BA1088; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.50A {Bacillus anthracis str} SCOP: d.157.1.9

Probab=98.08  E-value=1.4e-06  Score=63.00  Aligned_cols=27  Identities=26%  Similarity=0.336  Sum_probs=23.7

Q ss_pred             CCCCcCEEEeeccCchhhccHHHHHHH
Q 041025           43 RSISLNFLFTSHAHMDHIFTLLVLHIW   69 (99)
Q Consensus        43 ~~~~id~IfITH~H~DHigGLp~l~~~   69 (99)
                      ...+||+|||||.|.||++|++.+...
T Consensus        72 ~~~~i~~v~iTH~H~DH~~gl~~l~~~   98 (268)
T 1zkp_A           72 TPSDIDAVVLSHYHHDHVADIGVLQYA   98 (268)
T ss_dssp             CGGGCCEEECSCCCHHHHTTHHHHHHH
T ss_pred             CcccCCEEEEecCCchhhCCHHHHHHH
Confidence            345799999999999999999998765

>2r2d_A AGR_PTI_140P, Zn-dependent hydrolases; lactonase, N-acyl hompserine lactone, DI-nuclear zinc center quenching, AIIB, phosphate; HET: PO4; 1.75A {Agrobacterium tumefaciens}

Probab=98.06  E-value=7e-07  Score=64.31  Aligned_cols=23  Identities=22%  Similarity=0.206  Sum_probs=20.4

Q ss_pred             CCCcCEEEeeccCchhhccHHHH
Q 041025           44 SISLNFLFTSHAHMDHIFTLLVL   66 (99)
Q Consensus        44 ~~~id~IfITH~H~DHigGLp~l   66 (99)
                      +.+|++|+|||.|.||++|++.+
T Consensus       101 ~~~i~~VilTH~H~DH~gg~~~~  123 (276)
T 2r2d_A          101 PDDISTVVLSHLHNDHAGCVEYF  123 (276)
T ss_dssp             GGGCSEEECSCCSTTTSTTGGGC
T ss_pred             HHHCCEEEecCcccccCCChhhC
Confidence            34689999999999999999876

>3m8t_A 'BLR6230 protein; subclass B3 beta-lactamase, zinc enzyme, sulfonamide complex hydrolase-hydrolase inhibitor complex; HET: 4NZ; 1.33A {Bradyrhizobium japonicum} PDB: 3lvz_A* 2gmn_A

Probab=98.06  E-value=1.2e-06  Score=63.35  Aligned_cols=25  Identities=20%  Similarity=0.388  Sum_probs=22.4

Q ss_pred             CCcCEEEeeccCchhhccHHHHHHH
Q 041025           45 ISLNFLFTSHAHMDHIFTLLVLHIW   69 (99)
Q Consensus        45 ~~id~IfITH~H~DHigGLp~l~~~   69 (99)
                      .+|++|||||.|.||++|++.+...
T Consensus        92 ~~i~~ii~TH~H~DH~gg~~~l~~~  116 (294)
T 3m8t_A           92 ADIKLILNTHAHLDHTGGFAEIKKE  116 (294)
T ss_dssp             GGEEEEECSCCCHHHHTTHHHHHHH
T ss_pred             HHCcEEEECCCCccccccHHHHhhc
Confidence            3689999999999999999998764

>3md7_A Beta-lactamase-like; ssgcid, hydrolase, structural genomics, structural genomics center for infectious disease; HET: 5GP TLA; 1.27A {Brucella melitensis biovar abortus} PDB: 3qh8_A* 3py6_A* 3py5_A*

Probab=98.06  E-value=6.4e-07  Score=66.59  Aligned_cols=26  Identities=27%  Similarity=0.346  Sum_probs=22.7

Q ss_pred             CCCcCEEEeeccCchhhccHHHHHHH
Q 041025           44 SISLNFLFTSHAHMDHIFTLLVLHIW   69 (99)
Q Consensus        44 ~~~id~IfITH~H~DHigGLp~l~~~   69 (99)
                      ..+||+|||||.|.||++|++.+...
T Consensus        97 ~~~id~IliTH~H~DHi~Gl~~l~~~  122 (293)
T 3md7_A           97 VHMLDAAVYTHPHADHIHGIDDLRTY  122 (293)
T ss_dssp             CCCCSEEECSCCCHHHHTTGGGGHHH
T ss_pred             CCcccEEEEcCCCchhhCCHHHHHHH
Confidence            35799999999999999999987653

>2i7t_A Cleavage and polyadenylation specificity factor 73 kDa subunit; metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination; 2.10A {Homo sapiens} SCOP: d.157.1.10 PDB: 2i7v_A

Probab=98.06  E-value=1.4e-06  Score=68.73  Aligned_cols=27  Identities=26%  Similarity=0.316  Sum_probs=23.6

Q ss_pred             CCCcCEEEeeccCchhhccHHHHHHHh
Q 041025           44 SISLNFLFTSHAHMDHIFTLLVLHIWR   70 (99)
Q Consensus        44 ~~~id~IfITH~H~DHigGLp~l~~~r   70 (99)
                      +.+||+|||||+|.||++|+|.+....
T Consensus        61 ~~~Id~VllTH~H~DH~ggl~~l~~~~   87 (459)
T 2i7t_A           61 PAEIDLLLISHFHLDHCGALPWFLQKT   87 (459)
T ss_dssp             GGGCCEEECCCSSHHHHTTHHHHHHHS
T ss_pred             cccCcEEEECCCChhhhhhhHHHHHhc
Confidence            447899999999999999999987654

>1sml_A Protein (penicillinase); metallo-beta-lactamase, antibiotic resistance, binuclear zinc, hydrolase; 1.70A {Stenotrophomonas maltophilia} SCOP: d.157.1.1 PDB: 2aio_A* 2fm6_A 2fu6_A 2fu7_A* 2fu8_A* 2fu9_A* 2gfj_A* 2gfk_A* 2h6a_A 2hb9_A* 2qdt_A* 2qjs_A 2qin_A

Probab=98.05  E-value=1.4e-06  Score=63.03  Aligned_cols=25  Identities=32%  Similarity=0.373  Sum_probs=22.3

Q ss_pred             CCcCEEEeeccCchhhccHHHHHHH
Q 041025           45 ISLNFLFTSHAHMDHIFTLLVLHIW   69 (99)
Q Consensus        45 ~~id~IfITH~H~DHigGLp~l~~~   69 (99)
                      .+|++|||||.|.||++|++.+...
T Consensus        75 ~~i~~IilTH~H~DH~gg~~~l~~~   99 (269)
T 1sml_A           75 RDLRLILLSHAHADHAGPVAELKRR   99 (269)
T ss_dssp             GGEEEEECSCCSHHHHTTHHHHHHH
T ss_pred             HHCcEEEeCCCCccccCCHHHHHHh
Confidence            3689999999999999999998754

>3esh_A Protein similar to metal-dependent hydrolase; structural genomics, PSI-2, protein structure initiative; 2.50A {Staphylococcus aureus subsp}

Probab=98.04  E-value=7.7e-07  Score=65.08  Aligned_cols=26  Identities=19%  Similarity=0.331  Sum_probs=22.0

Q ss_pred             CCCCcCEEEeeccCchhhccHHHHHH
Q 041025           43 RSISLNFLFTSHAHMDHIFTLLVLHI   68 (99)
Q Consensus        43 ~~~~id~IfITH~H~DHigGLp~l~~   68 (99)
                      .+.+||+|||||+|.||++|++.+..
T Consensus        97 ~~~~Id~IllTH~H~DHigg~~~l~~  122 (280)
T 3esh_A           97 TPKDIDYVLMTHMHFDHAAGLTDQAG  122 (280)
T ss_dssp             CTTSCCEEECSCCCHHHHGGGSCTTS
T ss_pred             CHHHCCEEEeCCCcccccCccccccc
Confidence            34478999999999999999987653

>1k07_A FEZ-1 beta-lactamase; monomer with alpha-beta/BETA-alpha fold. two monomers PER AS UNIT., hydrolase; HET: GOL; 1.65A {Fluoribacter gormanii} SCOP: d.157.1.1 PDB: 1jt1_A* 1l9y_A

Probab=98.03  E-value=1.7e-06  Score=62.41  Aligned_cols=26  Identities=27%  Similarity=0.286  Sum_probs=22.5

Q ss_pred             CCCcCEEEeeccCchhhccHHHHHHH
Q 041025           44 SISLNFLFTSHAHMDHIFTLLVLHIW   69 (99)
Q Consensus        44 ~~~id~IfITH~H~DHigGLp~l~~~   69 (99)
                      +.+|++|||||.|.||++|++.+...
T Consensus        61 ~~~i~~IilTH~H~DH~gg~~~l~~~   86 (263)
T 1k07_A           61 FSDTKILLISHAHFDHAAGSELIKQQ   86 (263)
T ss_dssp             GGGEEEEECSSSSHHHHTTHHHHHHH
T ss_pred             HHHCcEEEeCCCCccccccHHHHHHh
Confidence            34689999999999999999988754

>3l6n_A Metallo-beta-lactamase; zinc, hydolase, antibiotics resistance, hydrolase; 1.65A {Chryseobacterium indologenes} SCOP: d.157.1.0

Probab=98.03  E-value=1.3e-06  Score=60.87  Aligned_cols=24  Identities=21%  Similarity=0.324  Sum_probs=21.8

Q ss_pred             CCcCEEEeeccCchhhccHHHHHH
Q 041025           45 ISLNFLFTSHAHMDHIFTLLVLHI   68 (99)
Q Consensus        45 ~~id~IfITH~H~DHigGLp~l~~   68 (99)
                      .+|++||+||.|.||++|++.+..
T Consensus        67 ~~i~~ii~TH~H~DH~gg~~~l~~   90 (219)
T 3l6n_A           67 LPVVAVFATHSHDDRAGDLSFFNN   90 (219)
T ss_dssp             CCEEEEECSSSSTTTTCCTHHHHH
T ss_pred             CceeEEEecCCCcccccCHHHHHh
Confidence            368999999999999999999874

>2ycb_A Beta-CAsp RNAse, cleavage and polyadenylation specificity factor; hydrolase, KH, metallo-beta-lactamase; 3.10A {Methanothermobacter thermautotrophicusorganism_taxid}

Probab=98.02  E-value=2.1e-06  Score=71.45  Aligned_cols=36  Identities=28%  Similarity=0.308  Sum_probs=27.0

Q ss_pred             CCCCcCEEEeeccCchhhccHHHHHHHhcCCCcCCC
Q 041025           43 RSISLNFLFTSHAHMDHIFTLLVLHIWRYSKNKFQP   78 (99)
Q Consensus        43 ~~~~id~IfITH~H~DHigGLp~l~~~r~~~~~~~P   78 (99)
                      ...+||+|||||+|.||++|+|.++.......+|.+
T Consensus       231 ~~~~Id~VlLTH~H~DHiGglp~L~~~~~~~~Iy~t  266 (636)
T 2ycb_A          231 TLDSLDAVIITHAHLDHSGFLPYLYHYGYDGPVYCT  266 (636)
T ss_dssp             CTTTCCEEECSSSSHHHHTTHHHHHHTTCCSCEEEC
T ss_pred             CcccCcEEEECCCChHHhcCHHHHHhcCCCCeEEEc
Confidence            345789999999999999999999863222334443

>2zwr_A Metallo-beta-lactamase superfamily protein; hydrolase; 2.20A {Thermus thermophilus} PDB: 2zzi_A

Probab=98.02  E-value=3.1e-06  Score=59.18  Aligned_cols=24  Identities=25%  Similarity=0.214  Sum_probs=21.5

Q ss_pred             CcCEEEeeccCchhhccHHHHHHH
Q 041025           46 SLNFLFTSHAHMDHIFTLLVLHIW   69 (99)
Q Consensus        46 ~id~IfITH~H~DHigGLp~l~~~   69 (99)
                      +|++|++||.|.||++|++.+...
T Consensus        46 ~i~~vilTH~H~DH~gg~~~l~~~   69 (207)
T 2zwr_A           46 IPLAILLTHAHFDHVGAVAPLVEA   69 (207)
T ss_dssp             CCSCEECSCCCGGGTTTHHHHHHH
T ss_pred             cccEEEECCCChHHHccHHHHHHH
Confidence            479999999999999999988754

>2p4z_A Metal-dependent hydrolases of the beta-lactamase superfamily II; metal-dependent hydrolases of the beta-lactamase superfamily hydrolase; 2.10A {Thermoanaerobacter tengcongensis}

Probab=98.01  E-value=1.8e-06  Score=64.57  Aligned_cols=27  Identities=26%  Similarity=0.169  Sum_probs=23.1

Q ss_pred             CCCCcCEEEeeccCchhhccHHHHHHH
Q 041025           43 RSISLNFLFTSHAHMDHIFTLLVLHIW   69 (99)
Q Consensus        43 ~~~~id~IfITH~H~DHigGLp~l~~~   69 (99)
                      .+.+||+|||||.|.||++|++.+...
T Consensus        65 ~~~~i~~v~lTH~H~DH~ggl~~~~~~   91 (284)
T 2p4z_A           65 DVGRIKKVVLTHGHYDHIGGLKGLLER   91 (284)
T ss_dssp             CGGGCCEEECCCSCHHHHTTHHHHHHH
T ss_pred             ChhhCCEEEECCCCchhhccHHHHHHH
Confidence            344689999999999999999988653

>3q6v_A Beta-lactamase; metalloenzyme, alpha-beta, hydrolase; 1.37A {Serratia fonticola} PDB: 3sd9_A

Probab=98.00  E-value=1.7e-06  Score=60.50  Aligned_cols=24  Identities=13%  Similarity=0.117  Sum_probs=21.7

Q ss_pred             CCCcCEEEeeccCchhhccHHHHH
Q 041025           44 SISLNFLFTSHAHMDHIFTLLVLH   67 (99)
Q Consensus        44 ~~~id~IfITH~H~DHigGLp~l~   67 (99)
                      ..+|++|++||.|.||++|++.+.
T Consensus        61 ~~~i~~ii~TH~H~DH~gg~~~~~   84 (233)
T 3q6v_A           61 PLPINEVINTNYHTDRAGGNAYWK   84 (233)
T ss_dssp             CCCEEEEECSSSSHHHHTTHHHHH
T ss_pred             CCCcEEEEECCCChhhhChHHHHh
Confidence            346899999999999999999986

>3iog_A Beta-lactamase; hydrolase, antibiotic resistance, metal-binding; HET: SDF; 1.41A {Aeromonas hydrophila} SCOP: d.157.1.1 PDB: 1x8i_A 3fai_A* 3iof_A* 1x8h_A 2qds_A* 2gkl_A* 1x8g_A* 3f9o_A 3t9m_A 3sw3_A

Probab=98.00  E-value=1.8e-06  Score=60.09  Aligned_cols=25  Identities=8%  Similarity=-0.088  Sum_probs=22.0

Q ss_pred             CCCcCEEEeeccCchhhccHHHHHH
Q 041025           44 SISLNFLFTSHAHMDHIFTLLVLHI   68 (99)
Q Consensus        44 ~~~id~IfITH~H~DHigGLp~l~~   68 (99)
                      ..+|++|++||.|.||++|++.+..
T Consensus        58 ~~~i~~ii~TH~H~DH~gg~~~l~~   82 (227)
T 3iog_A           58 RKPVLEVINTNYHTDRAGGNAYWKS   82 (227)
T ss_dssp             CSCEEEEECSSSSHHHHTTHHHHHH
T ss_pred             CCCeEEEEeCCCchhhcChHHHHhh
Confidence            4578999999999999999999753

>4ax1_B Metallo-beta-lactamase AIM-1; hydrolase, antibiotic resistance, acquired B3, drug binding; 1.40A {Pseudomonas aeruginosa} PDB: 4awy_B 4awz_A 4ax0_B

Probab=98.00  E-value=2e-06  Score=62.17  Aligned_cols=24  Identities=29%  Similarity=0.326  Sum_probs=21.9

Q ss_pred             CcCEEEeeccCchhhccHHHHHHH
Q 041025           46 SLNFLFTSHAHMDHIFTLLVLHIW   69 (99)
Q Consensus        46 ~id~IfITH~H~DHigGLp~l~~~   69 (99)
                      +|++||+||.|.||++|++.+...
T Consensus        96 ~i~~ii~TH~H~DH~gg~~~l~~~  119 (303)
T 4ax1_B           96 DVRAIVFSHEHFDHAGSLAELQKA  119 (303)
T ss_dssp             GEEEEECSCSSHHHHTTHHHHHHH
T ss_pred             HCcEEEcCCCCccccCCHHHHHhh
Confidence            489999999999999999998764

>2az4_A Hypothetical protein EF2904; structural genomics, PSI, protein STR initiative, midwest center for structural genomics, MCSG, U function; 2.00A {Enterococcus faecalis} SCOP: d.157.1.10

Probab=97.99  E-value=1e-06  Score=68.36  Aligned_cols=26  Identities=31%  Similarity=0.444  Sum_probs=22.5

Q ss_pred             CCCCCcCEEEeeccCchhhccHHHHH
Q 041025           42 SRSISLNFLFTSHAHMDHIFTLLVLH   67 (99)
Q Consensus        42 ~~~~~id~IfITH~H~DHigGLp~l~   67 (99)
                      ....+|++|||||+|.||++|+|.+.
T Consensus        80 ~~~~~i~~v~lTH~H~DHiggl~~l~  105 (429)
T 2az4_A           80 DKDYQHTAVFLSHAHLDHSRMINYLD  105 (429)
T ss_dssp             CCCCSEEEEECSCSCHHHHTTGGGBC
T ss_pred             hccccCCEEEECCchHHHhCcHhHhc
Confidence            34557899999999999999999874

>3aj3_A MLR6805 protein, 4-pyridoxolactonase; Zn-protein, metallo-beta-lactamase, hydrolase; 1.58A {Mesorhizobium loti} PDB: 3aj0_A

Probab=97.97  E-value=1.4e-06  Score=62.84  Aligned_cols=23  Identities=22%  Similarity=0.271  Sum_probs=20.6

Q ss_pred             CCCcCEEEeeccCchhhccHHHH
Q 041025           44 SISLNFLFTSHAHMDHIFTLLVL   66 (99)
Q Consensus        44 ~~~id~IfITH~H~DHigGLp~l   66 (99)
                      +.+|++|||||.|.||++|++.+
T Consensus        86 ~~~i~~VilTH~H~DH~gg~~~~  108 (274)
T 3aj3_A           86 PRDIDVVVNSHFHFDHCGGNKYF  108 (274)
T ss_dssp             GGGCCEEECSCCSGGGTTTGGGC
T ss_pred             HHHCCEEEecCcCcccCCchhhC
Confidence            44689999999999999999876

>1e5d_A Rubredoxin\:oxygen oxidoreductase; oxygenreductase, DIIRON-centre, flavoproteins, lactamase-fold; HET: FMN; 2.5A {Desulfovibrio gigas} SCOP: c.23.5.1 d.157.1.3

Probab=97.97  E-value=2.4e-06  Score=64.78  Aligned_cols=34  Identities=21%  Similarity=0.258  Sum_probs=26.6

Q ss_pred             CCCcCEEEeeccCchhhccHHHHHHHhcCCCcCC
Q 041025           44 SISLNFLFTSHAHMDHIFTLLVLHIWRYSKNKFQ   77 (99)
Q Consensus        44 ~~~id~IfITH~H~DHigGLp~l~~~r~~~~~~~   77 (99)
                      ..+|++|||||.|.||++|++.+........++.
T Consensus        69 ~~~i~~iiiTH~H~DH~gg~~~l~~~~~~~~v~~  102 (402)
T 1e5d_A           69 PKKIDYLVIQHLELDHAGALPALIEACQPEKIFT  102 (402)
T ss_dssp             GGGCCEEEECCCSHHHHTTHHHHHHHHCCSEEEE
T ss_pred             cccCCEEEeCCCCccccccHHHHHHHCCCCEEEE
Confidence            4578999999999999999999876543333333

>1ycg_A Nitric oxide reductase; DIIRON site, oxidoreductase; HET: FMN; 2.80A {Moorella thermoacetica} SCOP: c.23.5.1 d.157.1.3 PDB: 1ycf_A* 1ych_A*

Probab=97.97  E-value=3e-06  Score=64.17  Aligned_cols=35  Identities=14%  Similarity=0.218  Sum_probs=27.0

Q ss_pred             CCCcCEEEeeccCchhhccHHHHHHHhcCCCcCCC
Q 041025           44 SISLNFLFTSHAHMDHIFTLLVLHIWRYSKNKFQP   78 (99)
Q Consensus        44 ~~~id~IfITH~H~DHigGLp~l~~~r~~~~~~~P   78 (99)
                      ..+||+|||||.|.||++|++.+........++.+
T Consensus        70 ~~~i~~iiiTH~H~DH~gg~~~l~~~~~~~~v~~~  104 (398)
T 1ycg_A           70 PVKLDYLVVNHTESDHAGAFPAIMELCPDAHVLCT  104 (398)
T ss_dssp             SCCCSEEEESCCSHHHHTTHHHHHHHCTTCEEEEC
T ss_pred             cccCCEEEeCCCCcchhhhHHHHHHHCCCCEEEEc
Confidence            45799999999999999999998765433334433

>4hl2_A Beta-lactamase NDM-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ZZ7; 1.05A {Klebsiella pneumoniae} PDB: 4hl1_A* 4h0d_A* 4gyu_A* 4gyq_A 3q6x_A* 3spu_A 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A

Probab=97.96  E-value=2.5e-06  Score=60.82  Aligned_cols=23  Identities=26%  Similarity=0.397  Sum_probs=21.5

Q ss_pred             CcCEEEeeccCchhhccHHHHHH
Q 041025           46 SLNFLFTSHAHMDHIFTLLVLHI   68 (99)
Q Consensus        46 ~id~IfITH~H~DHigGLp~l~~   68 (99)
                      +|++||+||.|.||++|++.+..
T Consensus        85 ~i~~vi~TH~H~DH~gg~~~l~~  107 (243)
T 4hl2_A           85 PVALAVVTHAHQDKMGGMDALHA  107 (243)
T ss_dssp             CEEEEEECSSSHHHHTTHHHHHH
T ss_pred             CeeEEEECCCCccccCCHHHHHh
Confidence            68999999999999999999975

>3bk2_A RNAse J, metal dependent hydrolase; endoribonuclease, exoribonuclease, metallo-beta-lactamase; HET: U5P; 2.10A {Thermus thermophilus} PDB: 3bk1_A* 3t3o_A* 3t3n_A*

Probab=97.95  E-value=1.7e-06  Score=71.09  Aligned_cols=28  Identities=25%  Similarity=0.246  Sum_probs=24.5

Q ss_pred             CCCcCEEEeeccCchhhccHHHHHHHhc
Q 041025           44 SISLNFLFTSHAHMDHIFTLLVLHIWRY   71 (99)
Q Consensus        44 ~~~id~IfITH~H~DHigGLp~l~~~r~   71 (99)
                      ..+||+|||||+|.||++|+|+++....
T Consensus        72 ~~~Id~I~iTH~H~DHiggl~~L~~~~~   99 (562)
T 3bk2_A           72 RHKIKAWVLTHGHEDHIGGLPFLLPMIF   99 (562)
T ss_dssp             GGGEEEEECCCCCHHHHTTHHHHHHHHH
T ss_pred             cccCcEEEECCCChHHhCCHHHHHHhhc
Confidence            3478999999999999999999987653

>3zdk_A 5' exonuclease apollo; hydrolase; HET: TLA; 2.16A {Homo sapiens}

Probab=97.95  E-value=1.3e-06  Score=68.39  Aligned_cols=23  Identities=30%  Similarity=0.375  Sum_probs=20.7

Q ss_pred             CCcCEEEeeccCchhhccHHHHH
Q 041025           45 ISLNFLFTSHAHMDHIFTLLVLH   67 (99)
Q Consensus        45 ~~id~IfITH~H~DHigGLp~l~   67 (99)
                      .+|++|||||+|.||++|||.++
T Consensus        23 ~~i~ai~lTH~H~DHiggl~~l~   45 (336)
T 3zdk_A           23 GTARLFFLSHMHSDHTVGLSSTW   45 (336)
T ss_dssp             CSSCEEECCCCCGGGSTTCSTTC
T ss_pred             CCCCEEEECCChHHHHCchHHHc
Confidence            37999999999999999999863

>2xr1_A Cleavage and polyadenylation specificity factor 1 subunit; hydrolase, metallo-beta-lactamase, beta-CAsp, RNA processing; 2.59A {Methanosarcina mazei}

Probab=97.94  E-value=3e-06  Score=70.88  Aligned_cols=36  Identities=19%  Similarity=0.318  Sum_probs=27.1

Q ss_pred             CCCCcCEEEeeccCchhhccHHHHHHHhcCCCcCCC
Q 041025           43 RSISLNFLFTSHAHMDHIFTLLVLHIWRYSKNKFQP   78 (99)
Q Consensus        43 ~~~~id~IfITH~H~DHigGLp~l~~~r~~~~~~~P   78 (99)
                      ...+||+|||||+|.||++|+|.++.......+|.+
T Consensus       234 ~~~~Id~VllTH~H~DHiGgl~~L~~~~~~~~Iy~t  269 (640)
T 2xr1_A          234 PLNQIDAVIVTHAHLDHQGLVPLLFKYGYEGPVYCT  269 (640)
T ss_dssp             SGGGCCEEECCSSCHHHHTTHHHHHHTTCCSCEEEC
T ss_pred             CcccCcEEEECCCChhhhccHHHHHhcCCCCeEEEC
Confidence            344689999999999999999999863223344444

>3af5_A Putative uncharacterized protein PH1404; archaeal CPSF, beta-CAsp family, KH domain, ribonuclease, ME beta-lactamase superfamily, archaea; 2.60A {Pyrococcus horikoshii} PDB: 3af6_A*

Probab=97.93  E-value=2.9e-06  Score=70.97  Aligned_cols=34  Identities=24%  Similarity=0.356  Sum_probs=26.1

Q ss_pred             CCcCEEEeeccCchhhccHHHHHHHh-cCCCcCCC
Q 041025           45 ISLNFLFTSHAHMDHIFTLLVLHIWR-YSKNKFQP   78 (99)
Q Consensus        45 ~~id~IfITH~H~DHigGLp~l~~~r-~~~~~~~P   78 (99)
                      .+||+|||||+|.||++|+|.++... ....+|.+
T Consensus       247 ~~Id~VllTH~H~DHiGglp~L~~~~~~~~pIy~t  281 (651)
T 3af5_A          247 GLLDAIIITHAHLDHCGMLPYLFRYNLFDGPIYTT  281 (651)
T ss_dssp             TCCCEEECSCSSHHHHTTHHHHHHTTCCCSCEEEC
T ss_pred             CCCCEEEECCCChHhhcCHHHHHhcCCCCceEEEc
Confidence            46899999999999999999998643 22344444

>2xf4_A Hydroxyacylglutathione hydrolase; HET: PG4; 2.30A {Salmonella enterica}

Probab=97.93  E-value=2.8e-06  Score=59.03  Aligned_cols=25  Identities=24%  Similarity=0.317  Sum_probs=21.9

Q ss_pred             CcCEEEeeccCchhhccHHHHHHHh
Q 041025           46 SLNFLFTSHAHMDHIFTLLVLHIWR   70 (99)
Q Consensus        46 ~id~IfITH~H~DHigGLp~l~~~r   70 (99)
                      ++++|++||.|.||++|++.+....
T Consensus        48 ~i~~ii~TH~H~DH~gg~~~l~~~~   72 (210)
T 2xf4_A           48 TLMQILLTHGHLDHVGAASELAQHY   72 (210)
T ss_dssp             EEEEEECSCSCHHHHTTHHHHHHHH
T ss_pred             ceeEEEECCCChhhhcCHHHHHHHc
Confidence            4699999999999999999987643

>2ohh_A Type A flavoprotein FPRA; beta-lactamase like domain, flavodoxine like domain, oxidore; HET: FMN; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 2ohi_A* 2ohj_A*

Probab=97.93  E-value=4.1e-06  Score=63.50  Aligned_cols=35  Identities=17%  Similarity=0.207  Sum_probs=27.0

Q ss_pred             CCCcCEEEeeccCchhhccHHHHHHHhcCCCcCCC
Q 041025           44 SISLNFLFTSHAHMDHIFTLLVLHIWRYSKNKFQP   78 (99)
Q Consensus        44 ~~~id~IfITH~H~DHigGLp~l~~~r~~~~~~~P   78 (99)
                      ..+|++||+||.|.||++|++.+........++.+
T Consensus        73 ~~~i~~ii~TH~H~DH~gg~~~l~~~~p~~~v~~~  107 (404)
T 2ohh_A           73 MERVDYIIQNHVEKDHSGVLVELHRRFPEAPIYCT  107 (404)
T ss_dssp             CCCCCEEECSCCSHHHHTTHHHHHHHSTTCCEEEC
T ss_pred             ccCCCEEEeCCCCCcccchHHHHHHHCCCCEEEEC
Confidence            45799999999999999999988765433344433

>1mqo_A Beta-lactamase II; alpha-beta/BETA-alpha fold, hydrolase; HET: CIT; 1.35A {Bacillus cereus} SCOP: d.157.1.1 PDB: 1bc2_A 1bvt_A* 3i0v_A 3i11_A 3i13_A 3i14_A 3i15_A 2uyx_A 2bc2_A 3bc2_A 2bfl_A 2bfk_A 2bfz_B 2bg2_A 2bg7_A 2bg8_A 1dxk_A 3kns_A 3knr_A 2bfz_A ...

Probab=97.92  E-value=3.8e-06  Score=59.32  Aligned_cols=25  Identities=24%  Similarity=0.227  Sum_probs=22.5

Q ss_pred             CCcCEEEeeccCchhhccHHHHHHH
Q 041025           45 ISLNFLFTSHAHMDHIFTLLVLHIW   69 (99)
Q Consensus        45 ~~id~IfITH~H~DHigGLp~l~~~   69 (99)
                      .+|++|++||.|.||++|++.+...
T Consensus        77 ~~i~~ii~TH~H~DH~gg~~~l~~~  101 (227)
T 1mqo_A           77 KRVTDVIITHAHADRIGGIKTLKER  101 (227)
T ss_dssp             SCEEEEECCCCSHHHHTTHHHHHHH
T ss_pred             CCceEEEeCCCCchhccchHHHhhC
Confidence            5789999999999999999988754

>1m2x_A Class B carbapenemase BLAB-1; alpha-beta/BETA-alpha fold., hydrolase; HET: MCO; 1.50A {Elizabethkingia meningoseptica} SCOP: d.157.1.1

Probab=97.91  E-value=3.6e-06  Score=59.32  Aligned_cols=23  Identities=17%  Similarity=0.114  Sum_probs=21.3

Q ss_pred             CcCEEEeeccCchhhccHHHHHH
Q 041025           46 SLNFLFTSHAHMDHIFTLLVLHI   68 (99)
Q Consensus        46 ~id~IfITH~H~DHigGLp~l~~   68 (99)
                      +|++||+||.|.||++|++.+..
T Consensus        64 ~i~~vi~TH~H~DH~gg~~~~~~   86 (223)
T 1m2x_A           64 KVIMNIATHSHDDRAGGLEYFGK   86 (223)
T ss_dssp             CEEEEECSSSSTTTTTTHHHHHH
T ss_pred             CeEEEEeccCCccccCchhhHhh
Confidence            68999999999999999998875

>2zo4_A Metallo-beta-lactamase family protein; hydrolase; 2.10A {Thermus thermophilus}

Probab=97.90  E-value=4.9e-06  Score=61.14  Aligned_cols=25  Identities=16%  Similarity=0.097  Sum_probs=22.1

Q ss_pred             CCcCEEEeeccCchhhccHHHHHHH
Q 041025           45 ISLNFLFTSHAHMDHIFTLLVLHIW   69 (99)
Q Consensus        45 ~~id~IfITH~H~DHigGLp~l~~~   69 (99)
                      .+|++|++||.|.||++|++.+...
T Consensus        61 ~~i~~Vi~TH~H~DH~gg~~~l~~~   85 (317)
T 2zo4_A           61 QDVKTILLTHHHPDHYGLSGFFEGL   85 (317)
T ss_dssp             GGCCEEEESCCSHHHHTTHHHHHHT
T ss_pred             hhcCEEEEcCCCCcccccHHHHHhC
Confidence            4589999999999999999988753

>4ad9_A Lactb2, beta-lactamase-like protein 2; hydrolase, metallo-beta lactamase, mitochondria; 2.60A {Homo sapiens}

Probab=97.90  E-value=3.5e-06  Score=61.67  Aligned_cols=25  Identities=16%  Similarity=0.050  Sum_probs=22.9

Q ss_pred             CcCEEEeeccCchhhccHHHHHHHh
Q 041025           46 SLNFLFTSHAHMDHIFTLLVLHIWR   70 (99)
Q Consensus        46 ~id~IfITH~H~DHigGLp~l~~~r   70 (99)
                      +|++||+||.|.||++|++.+....
T Consensus        70 ~i~~Ii~TH~H~DH~gg~~~l~~~~   94 (289)
T 4ad9_A           70 AIQEIVVTHWHRDHSGGIGDICKSI   94 (289)
T ss_dssp             CEEEEECSCSSHHHHTTHHHHHHHS
T ss_pred             CceEEEEcCCCCcccccHHHHHHhh
Confidence            6899999999999999999998764

>2i7x_A Protein CFT2; polyadenylation, metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination, double-strand break repair; 2.50A {Saccharomyces cerevisiae} SCOP: d.157.1.10

Probab=97.90  E-value=3.6e-06  Score=71.94  Aligned_cols=24  Identities=8%  Similarity=0.122  Sum_probs=22.2

Q ss_pred             CcCEEEeeccCchhhccHHHHHHH
Q 041025           46 SLNFLFTSHAHMDHIFTLLVLHIW   69 (99)
Q Consensus        46 ~id~IfITH~H~DHigGLp~l~~~   69 (99)
                      +||+|||||+|.||+||||+++..
T Consensus        53 ~IdaVlLTH~H~DHiGgLp~L~~~   76 (717)
T 2i7x_A           53 EIDVIILSQPTIECLGAHSLLYYN   76 (717)
T ss_dssp             GCCEEECCCSSHHHHTTHHHHHHH
T ss_pred             CCCEEEECCCChHHHCCHHHHHHh
Confidence            689999999999999999999854

>3g1p_A Protein PHNP; C-P lyase, phosphodiesterase, phosphonate utilization, alkylphosphonate uptake; 1.40A {Escherichia coli} PDB: 3p2u_A

Probab=97.89  E-value=2.4e-06  Score=62.08  Aligned_cols=24  Identities=33%  Similarity=0.492  Sum_probs=21.5

Q ss_pred             CCCcCEEEeeccCchhhccHHHHH
Q 041025           44 SISLNFLFTSHAHMDHIFTLLVLH   67 (99)
Q Consensus        44 ~~~id~IfITH~H~DHigGLp~l~   67 (99)
                      ..+||+|||||.|.||++|++.+.
T Consensus        66 ~~~id~IliTH~H~DHi~gl~~l~   89 (258)
T 3g1p_A           66 PGSFQQFLLTHYHMDHVQGLFPLR   89 (258)
T ss_dssp             TTSSCEEECSCCCHHHHGGGTTTT
T ss_pred             cccCCEEEEccCchhHhCCHHHHh
Confidence            458999999999999999998774

>2bib_A CBPE, teichoic acid phosphorylcholine esterase/ choline protein; choline-binding protein, PCE, phosphorylcholine estera hydrolase; HET: PC BTB; 1.92A {Streptococcus pneumoniae} SCOP: b.109.1.1 d.157.1.8 PDB: 1wra_A*

Probab=97.87  E-value=3.8e-06  Score=67.53  Aligned_cols=28  Identities=29%  Similarity=0.307  Sum_probs=24.2

Q ss_pred             CCcCEEEeeccCchhhccHHHHHHHhcC
Q 041025           45 ISLNFLFTSHAHMDHIFTLLVLHIWRYS   72 (99)
Q Consensus        45 ~~id~IfITH~H~DHigGLp~l~~~r~~   72 (99)
                      .+||+|||||.|.||++|++.++.....
T Consensus        76 ~~id~vilTH~H~DHiggl~~l~~~~~~  103 (547)
T 2bib_A           76 QKLDFILVTHTHSDHIGNVDELLSTYPV  103 (547)
T ss_dssp             CCBSCEECCCSCHHHHTTHHHHHHHSCB
T ss_pred             ccccEEEEcCCCccccCCHHHHHHhCCc
Confidence            3689999999999999999999876443

>2vw8_A PA1000, PQSE; quinolone signal response protein, signaling protein, SSPF; 1.45A {Pseudomonas aeruginosa PAO1} PDB: 2q0j_A 2q0i_A 3dh8_A*

Probab=97.86  E-value=2.2e-06  Score=63.17  Aligned_cols=26  Identities=23%  Similarity=0.293  Sum_probs=22.4

Q ss_pred             CCCcCEEEeeccCchhhccHHHHHHH
Q 041025           44 SISLNFLFTSHAHMDHIFTLLVLHIW   69 (99)
Q Consensus        44 ~~~id~IfITH~H~DHigGLp~l~~~   69 (99)
                      ..+|++|++||.|.||++|++.+...
T Consensus        61 ~~~i~~Ii~TH~H~DH~gg~~~l~~~   86 (303)
T 2vw8_A           61 PSQVHYWLITHKHYDHCGLLPYLCPR   86 (303)
T ss_dssp             GGGEEEEECCCCSTTTTTTHHHHGGG
T ss_pred             cccceEEEeccCCccccCCHHHHHHh
Confidence            34689999999999999999988643

>3zq4_A Ribonuclease J 1, RNAse J1; hydrolase, RNA maturation; 3.00A {Bacillus subtilis}

Probab=97.86  E-value=4.5e-06  Score=68.96  Aligned_cols=27  Identities=30%  Similarity=0.278  Sum_probs=23.9

Q ss_pred             CCCCcCEEEeeccCchhhccHHHHHHH
Q 041025           43 RSISLNFLFTSHAHMDHIFTLLVLHIW   69 (99)
Q Consensus        43 ~~~~id~IfITH~H~DHigGLp~l~~~   69 (99)
                      ...+||+|||||+|.||++|+|++...
T Consensus        63 ~~~~Id~I~lTH~H~DHiggl~~l~~~   89 (555)
T 3zq4_A           63 NEDKIKGLFITHGHEDHIGGIPYLLRQ   89 (555)
T ss_dssp             TTTTEEEEEESCCCHHHHTTHHHHHTT
T ss_pred             CccCCCEEEECCCchhhhCCHHHHHHh
Confidence            346799999999999999999999754

>1a7t_A Metallo-beta-lactamase; hydrolase (beta-lactamase), zinc; HET: MES; 1.85A {Bacteroides fragilis} SCOP: d.157.1.1 PDB: 1a8t_A* 2bmi_A 1kr3_A 1znb_A 2znb_A 3znb_A 4znb_A 1hlk_A*

Probab=97.85  E-value=3.8e-06  Score=59.66  Aligned_cols=24  Identities=25%  Similarity=0.150  Sum_probs=21.7

Q ss_pred             CCcCEEEeeccCchhhccHHHHHH
Q 041025           45 ISLNFLFTSHAHMDHIFTLLVLHI   68 (99)
Q Consensus        45 ~~id~IfITH~H~DHigGLp~l~~   68 (99)
                      .+|++|++||.|.||++|++.+..
T Consensus        73 ~~i~~ii~TH~H~DH~gg~~~~~~   96 (232)
T 1a7t_A           73 AKVTTFIPNHWHGDCIGGLGYLQR   96 (232)
T ss_dssp             CEEEEEECSSSSHHHHTTHHHHHH
T ss_pred             CCeEEEEeCCCCccccCCHHHHHh
Confidence            368999999999999999998875

>1ztc_A Hypothetical protein TM0894; structural genomics, joint center for structural genomics, J protein structure initiative, PSI, hydrolase; HET: MSE; 2.10A {Thermotoga maritima} SCOP: d.157.1.11

Probab=97.85  E-value=2.5e-06  Score=60.68  Aligned_cols=24  Identities=25%  Similarity=0.556  Sum_probs=21.0

Q ss_pred             CCCcCEEEeeccCchhhccHHHHH
Q 041025           44 SISLNFLFTSHAHMDHIFTLLVLH   67 (99)
Q Consensus        44 ~~~id~IfITH~H~DHigGLp~l~   67 (99)
                      +.+|++|||||.|.||++|++.+.
T Consensus        71 ~~~i~~ViiTH~H~DH~gg~~~~~   94 (221)
T 1ztc_A           71 PDDITDVLFTHVHLDHIFNSVLFE   94 (221)
T ss_dssp             GGGCCEEECSCCCHHHHGGGGGCT
T ss_pred             HHHCcEEEEcCCccccCCchhhCC
Confidence            447899999999999999998764

>2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis}

Probab=97.81  E-value=4.8e-06  Score=63.83  Aligned_cols=26  Identities=19%  Similarity=0.107  Sum_probs=22.7

Q ss_pred             CCCcCEEEeeccCchhhccHHHHHHH
Q 041025           44 SISLNFLFTSHAHMDHIFTLLVLHIW   69 (99)
Q Consensus        44 ~~~id~IfITH~H~DHigGLp~l~~~   69 (99)
                      ..+|++||+||.|.||++|++.+...
T Consensus        75 ~~~i~~ii~TH~H~DH~gg~~~l~~~  100 (414)
T 2q9u_A           75 LDKIKYVVMNHAEGDHASSLKDHYHK  100 (414)
T ss_dssp             GGGCCEEECSCCSGGGTTTHHHHGGG
T ss_pred             cccCCEEEeCCCCcchhcCHHHHHHH
Confidence            35799999999999999999988654

>1xm8_A Glyoxalase II; structural genomics, protein structure initiative, CESG, AT2G31350, metallo-hydrolase, zinc/iron binuclear center; 1.74A {Arabidopsis thaliana} SCOP: d.157.1.2 PDB: 2q42_A

Probab=97.79  E-value=9e-06  Score=60.09  Aligned_cols=25  Identities=28%  Similarity=0.383  Sum_probs=22.3

Q ss_pred             CcCEEEeeccCchhhccHHHHHHHh
Q 041025           46 SLNFLFTSHAHMDHIFTLLVLHIWR   70 (99)
Q Consensus        46 ~id~IfITH~H~DHigGLp~l~~~r   70 (99)
                      +|++|++||.|.||++|++.+....
T Consensus        46 ~i~~Il~TH~H~DH~gg~~~l~~~~   70 (254)
T 1xm8_A           46 NLTYILNTHHHYDHTGGNLELKDRY   70 (254)
T ss_dssp             CCCEEECSSCCHHHHTTHHHHHHHH
T ss_pred             CccEEEECCCCCcccccHHHHHHHc
Confidence            5799999999999999999987653

>2qed_A Hydroxyacylglutathione hydrolase; metallo-B- superfamily, salmonella typhimurium LT2; 1.45A {Salmonella typhimurium} SCOP: d.157.1.2

Probab=97.78  E-value=5.1e-06  Score=61.55  Aligned_cols=26  Identities=23%  Similarity=0.171  Sum_probs=22.8

Q ss_pred             CcCEEEeeccCchhhccHHHHHHHhc
Q 041025           46 SLNFLFTSHAHMDHIFTLLVLHIWRY   71 (99)
Q Consensus        46 ~id~IfITH~H~DHigGLp~l~~~r~   71 (99)
                      +|++|++||.|.||++|++.+.....
T Consensus        52 ~i~~Il~TH~H~DH~gg~~~l~~~~~   77 (258)
T 2qed_A           52 MPEAIFLTHHHHDHVGGVKELLQHFP   77 (258)
T ss_dssp             EEEEEECCSCCHHHHTTHHHHHHHCT
T ss_pred             CCCEEEeCCCCccccCCHHHHHHHCC
Confidence            68999999999999999999876543

>1jjt_A IMP-1 metallo beta-lactamase; metallo-beta-lactamase inhibitor, succinic acid inhibitor, I metallo-beta-lactamase, hydrolase; HET: BDS; 1.80A {Pseudomonas aeruginosa} SCOP: d.157.1.1 PDB: 1dd6_A* 1vgn_A* 2doo_A* 1wup_A 1wuo_A 1jje_A* 1ddk_A

Probab=97.77  E-value=6.1e-06  Score=58.61  Aligned_cols=23  Identities=22%  Similarity=0.115  Sum_probs=21.2

Q ss_pred             CcCEEEeeccCchhhccHHHHHH
Q 041025           46 SLNFLFTSHAHMDHIFTLLVLHI   68 (99)
Q Consensus        46 ~id~IfITH~H~DHigGLp~l~~   68 (99)
                      +|++|++||.|.||++|++.+..
T Consensus        69 ~i~~ii~TH~H~DH~gg~~~l~~   91 (228)
T 1jjt_A           69 KIKGSISSHFHSDSTGGIEWLNS   91 (228)
T ss_dssp             EEEEEECSSSSHHHHTTHHHHHH
T ss_pred             CeeEEEeCCCChhhhccHHHHHh
Confidence            68999999999999999998865

>1qh5_A Glyoxalase II, protein (hydroxyacylglutathione hydrolase); metallo-hydrolase; HET: GSH GBP; 1.45A {Homo sapiens} SCOP: d.157.1.2 PDB: 1qh3_A*

Probab=97.77  E-value=6.2e-06  Score=61.31  Aligned_cols=25  Identities=28%  Similarity=0.216  Sum_probs=22.1

Q ss_pred             CcCEEEeeccCchhhccHHHHHHHh
Q 041025           46 SLNFLFTSHAHMDHIFTLLVLHIWR   70 (99)
Q Consensus        46 ~id~IfITH~H~DHigGLp~l~~~r   70 (99)
                      +|++|++||.|.||++|++.+....
T Consensus        46 ~i~~IllTH~H~DH~gg~~~l~~~~   70 (260)
T 1qh5_A           46 KLTTVLTTHHHWDHAGGNEKLVKLE   70 (260)
T ss_dssp             EEEEEECCCSSHHHHTTHHHHHHHS
T ss_pred             CccEEEeCCCCccccCCHHHHHHHC
Confidence            4689999999999999999987654

>3jxp_A Coenzyme PQQ synthesis protein B; alpha-beta protein, PQQ biosynthesis, transport, biosyntheti; 2.20A {Pseudomonas putida} SCOP: d.157.1.6 PDB: 1xto_A

Probab=97.76  E-value=4.5e-06  Score=64.33  Aligned_cols=25  Identities=28%  Similarity=0.433  Sum_probs=22.4

Q ss_pred             CCCCcCEEEeeccCchhhccHHHHH
Q 041025           43 RSISLNFLFTSHAHMDHIFTLLVLH   67 (99)
Q Consensus        43 ~~~~id~IfITH~H~DHigGLp~l~   67 (99)
                      +..+||+|||||.|.||++|++.+.
T Consensus        79 ~~~~i~~i~lTH~H~DH~~gl~~l~  103 (321)
T 3jxp_A           79 RDTGINAIVLLDSQIDHTTGLLSLR  103 (321)
T ss_dssp             SCCSEEEEECSCCCHHHHGGGGGGG
T ss_pred             CcccCCEEEECCCChhhhhhHHHHH
Confidence            4568999999999999999999984

>1p9e_A Methyl parathion hydrolase; Zn containing; 2.40A {Pseudomonas SP} SCOP: d.157.1.5

Probab=97.74  E-value=7.7e-06  Score=62.16  Aligned_cols=22  Identities=27%  Similarity=0.507  Sum_probs=19.4

Q ss_pred             CCCcCEEEeeccCchhhccHHH
Q 041025           44 SISLNFLFTSHAHMDHIFTLLV   65 (99)
Q Consensus        44 ~~~id~IfITH~H~DHigGLp~   65 (99)
                      +.+||+|+|||.|.||++|+..
T Consensus       137 ~~~Id~VilTH~H~DHiggl~~  158 (331)
T 1p9e_A          137 PEQVDEIYITHMHPDHVGGLMV  158 (331)
T ss_dssp             GGGCCEEECSCCCHHHHGGGEE
T ss_pred             HHHCCEEEeCCcccccCCcccc
Confidence            3469999999999999999973

>2y8b_A Metallo-B-lactamase; hydrolase, cephalosporins, antibiotic recognition; 1.70A {Pseudomonas aeruginosa} PDB: 2y8a_A 2y87_A 2yz3_A* 2whg_A* 2wrs_A* 1ko3_A 1ko2_A

Probab=97.73  E-value=9.4e-06  Score=59.47  Aligned_cols=23  Identities=22%  Similarity=0.222  Sum_probs=21.0

Q ss_pred             CcCEEEeeccCchhhccHHHHHH
Q 041025           46 SLNFLFTSHAHMDHIFTLLVLHI   68 (99)
Q Consensus        46 ~id~IfITH~H~DHigGLp~l~~   68 (99)
                      +|++|++||.|.||++|++.+..
T Consensus       105 ~i~~VilTH~H~DH~gg~~~~~~  127 (265)
T 2y8b_A          105 PVTRSISTHFHDDRVGGVDVLRA  127 (265)
T ss_dssp             CEEEEECSSSSHHHHTTHHHHHH
T ss_pred             CeEEEEeCCCChhhcCCHHHHhh
Confidence            68999999999999999998764

>2gcu_A Putative hydroxyacylglutathione hydrolase 3; ethylmalonic encephalopathy, ETHE1, structural genomics, protein structure initiative; 1.48A {Arabidopsis thaliana}

Probab=97.72  E-value=6.6e-06  Score=60.37  Aligned_cols=25  Identities=24%  Similarity=0.336  Sum_probs=22.1

Q ss_pred             CcCEEEeeccCchhhccHHHHHHHh
Q 041025           46 SLNFLFTSHAHMDHIFTLLVLHIWR   70 (99)
Q Consensus        46 ~id~IfITH~H~DHigGLp~l~~~r   70 (99)
                      .|++||+||.|.||++|++.+....
T Consensus        53 ~i~~Il~TH~H~DH~gg~~~l~~~~   77 (245)
T 2gcu_A           53 KLIYAMNTHVHADHVTGTGLLKTKL   77 (245)
T ss_dssp             EEEEEECSSCCSSSCBSHHHHHHHS
T ss_pred             eeeEEEeCCCChhhhhhHHHHHHhC
Confidence            4799999999999999999987643

>4b87_A DNA cross-LINK repair 1A protein; dclre1A, DCLRE, interstrand crosslink repair, hydrolase, NIT mustard, cancer, chemotherapy, PSO2 homolog,; HET: DNA; 2.16A {Homo sapiens}

Probab=97.72  E-value=6.6e-06  Score=64.94  Aligned_cols=21  Identities=29%  Similarity=0.278  Sum_probs=19.4

Q ss_pred             CCCcCEEEeeccCchhhccHH
Q 041025           44 SISLNFLFTSHAHMDHIFTLL   64 (99)
Q Consensus        44 ~~~id~IfITH~H~DHigGLp   64 (99)
                      ..+||+|||||+|.||++|++
T Consensus        49 ~~~IdaI~lTH~H~DHiggl~   69 (367)
T 4b87_A           49 VEGCTAYFLTHFHSDHYAGLS   69 (367)
T ss_dssp             CTTCCEEECCCCCHHHHTTCS
T ss_pred             ccCCcEEEECcChHHHhCCcc
Confidence            457999999999999999998

>4efz_A Metallo-beta-lactamase family protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.60A {Burkholderia pseudomallei}

Probab=97.69  E-value=1.1e-05  Score=59.94  Aligned_cols=25  Identities=24%  Similarity=0.420  Sum_probs=22.2

Q ss_pred             CcCEEEeeccCchhhccHHHHHHHh
Q 041025           46 SLNFLFTSHAHMDHIFTLLVLHIWR   70 (99)
Q Consensus        46 ~id~IfITH~H~DHigGLp~l~~~r   70 (99)
                      +|++||+||.|.||++|++.+....
T Consensus        64 ~i~~Il~TH~H~DH~gg~~~l~~~~   88 (298)
T 4efz_A           64 RVRWLLETHVHADHLSAAPYLKTRV   88 (298)
T ss_dssp             EEEEEECSSCCSSSBCCHHHHHHHH
T ss_pred             cceEEEECCCchhhhhhHHHHHHHh
Confidence            4799999999999999999987653

>2p18_A Glyoxalase II; metalloprotein, beta sandwich, alpha-helical domain, hydrola; HET: SPD; 1.80A {Leishmania infantum} PDB: 2p1e_A*

Probab=97.65  E-value=1.5e-05  Score=60.74  Aligned_cols=26  Identities=19%  Similarity=0.180  Sum_probs=23.2

Q ss_pred             CCcCEEEeeccCchhhccHHHHHHHh
Q 041025           45 ISLNFLFTSHAHMDHIFTLLVLHIWR   70 (99)
Q Consensus        45 ~~id~IfITH~H~DHigGLp~l~~~r   70 (99)
                      .+|++||+||.|.||++|++.+....
T Consensus        83 ~~i~~IllTH~H~DH~gg~~~l~~~~  108 (311)
T 2p18_A           83 YTFSTILSTHKHWDHSGGNAKLKAEL  108 (311)
T ss_dssp             CEEEEEEESSSSHHHHTTHHHHHHHH
T ss_pred             CCccEEEeCCCCccccCCHHHHHHhh
Confidence            46899999999999999999987654

>4eyb_A Beta-lactamase NDM-1; metallo beta lactamase, antibiotic, hydrolase-antibiotic COM; HET: 0WO; 1.16A {Klebsiella pneumoniae} PDB: 4ey2_A* 4eyf_A* 4exy_A 4exs_B 4eyl_A* 3spu_A 3q6x_A* 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A

Probab=97.62  E-value=1.9e-05  Score=58.07  Aligned_cols=24  Identities=25%  Similarity=0.419  Sum_probs=21.5

Q ss_pred             CCcCEEEeeccCchhhccHHHHHH
Q 041025           45 ISLNFLFTSHAHMDHIFTLLVLHI   68 (99)
Q Consensus        45 ~~id~IfITH~H~DHigGLp~l~~   68 (99)
                      ..|++|++||+|.||++|+..+..
T Consensus       111 ~~I~~Ii~TH~H~DH~gg~~~l~~  134 (270)
T 4eyb_A          111 LPVALAVVTHAHQDKMGGMDALHA  134 (270)
T ss_dssp             CCEEEEEECSSSHHHHTTHHHHHH
T ss_pred             CceEEEEeCCCChhhcCcHHHHHH
Confidence            468999999999999999998854

>3rpc_A Possible metal-dependent hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.49A {Veillonella parvula}

Probab=97.61  E-value=2.2e-05  Score=57.43  Aligned_cols=23  Identities=22%  Similarity=0.371  Sum_probs=20.7

Q ss_pred             CcCEEEeeccCchhhccHHHHHH
Q 041025           46 SLNFLFTSHAHMDHIFTLLVLHI   68 (99)
Q Consensus        46 ~id~IfITH~H~DHigGLp~l~~   68 (99)
                      ++|+|||||.|.||+++++.+..
T Consensus        64 ~id~iliTH~H~DH~~~~~~~~~   86 (264)
T 3rpc_A           64 NVTAVVVTHTHLDHWDDTAINSI   86 (264)
T ss_dssp             TCCEEECSCCCGGGSCHHHHHHS
T ss_pred             cCCEEEECCCchhhCCCHHHHhh
Confidence            68999999999999999987654

>2fhx_A SPM-1; metallo-beta-lactamase, dinuclear zinc, antibiotic resistanc hydrolase, metal binding protein; 1.90A {Pseudomonas aeruginosa}

Probab=97.55  E-value=3.1e-05  Score=54.76  Aligned_cols=20  Identities=15%  Similarity=0.112  Sum_probs=18.3

Q ss_pred             EEEeeccCchhhccHHHHHH
Q 041025           49 FLFTSHAHMDHIFTLLVLHI   68 (99)
Q Consensus        49 ~IfITH~H~DHigGLp~l~~   68 (99)
                      +|++||.|.||++|++.+..
T Consensus        71 ~vi~TH~H~DH~gg~~~l~~   90 (246)
T 2fhx_A           71 VAINTHFHLDGTGGNEIYKK   90 (246)
T ss_dssp             EEECCSSSHHHHTTHHHHHH
T ss_pred             EEEeCCCCccccChHHHHhh
Confidence            79999999999999998864

>2wyl_A L-ascorbate-6-phosphate lactonase ULAG; hydrolase; 2.59A {Escherichia coli} PDB: 2wym_A*

Probab=97.50  E-value=3e-05  Score=59.51  Aligned_cols=36  Identities=17%  Similarity=0.137  Sum_probs=22.9

Q ss_pred             CCcCEEEeeccCchhhc--cHHHHHHHhc-CCCcCCCcc
Q 041025           45 ISLNFLFTSHAHMDHIF--TLLVLHIWRY-SKNKFQPLK   80 (99)
Q Consensus        45 ~~id~IfITH~H~DHig--GLp~l~~~r~-~~~~~~Pl~   80 (99)
                      .+||+|||||.|.||++  ++..+..... ...++.|..
T Consensus       108 ~~id~VliTH~H~DHig~~~l~~l~~~~~~~~~v~~p~~  146 (360)
T 2wyl_A          108 RQIDAVLATHDHNDHIDVNVAAAVMQNCADDVPFIGPKT  146 (360)
T ss_dssp             CCCSEEECSBSCTTTCCHHHHHHHHHHSCTTCCEEECHH
T ss_pred             CCCCEEEECCCchhcCCHHHHHHHHhcCCCCCEEEEcHH
Confidence            46999999999999995  3443433221 334455543

>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}

Probab=97.49  E-value=2.7e-05  Score=61.52  Aligned_cols=24  Identities=13%  Similarity=0.084  Sum_probs=22.0

Q ss_pred             CcCEEEeeccCchhhccHHHHHHH
Q 041025           46 SLNFLFTSHAHMDHIFTLLVLHIW   69 (99)
Q Consensus        46 ~id~IfITH~H~DHigGLp~l~~~   69 (99)
                      +|++||+||.|.||++|++.+...
T Consensus        51 ~i~~Il~TH~H~DH~gg~~~l~~~   74 (474)
T 3tp9_A           51 RIVAALETHIHADFVSGAREMADR   74 (474)
T ss_dssp             EEEEEECSSCCSSSCCCHHHHHHH
T ss_pred             eeEEEEcCcCchhhhCCHHHHHHH
Confidence            589999999999999999998765

>3bv6_A Metal-dependent hydrolase; metallo protein, beta-lactamase like fold, MCSG, structural PSI-2, protein structure initiative; 1.80A {Vibrio cholerae o1 biovar eltor}

Probab=97.47  E-value=3.3e-05  Score=60.07  Aligned_cols=17  Identities=35%  Similarity=0.561  Sum_probs=15.5

Q ss_pred             CCcCEEEeeccCchhhc
Q 041025           45 ISLNFLFTSHAHMDHIF   61 (99)
Q Consensus        45 ~~id~IfITH~H~DHig   61 (99)
                      .+||+|||||.|.||++
T Consensus       132 ~~iD~IliTH~H~DHig  148 (379)
T 3bv6_A          132 KEIDAVLASHDHADHID  148 (379)
T ss_dssp             CCCSEEECSBCSGGGCC
T ss_pred             CCCCEEEECCCCcccCC
Confidence            46899999999999995

>1vjn_A Zn-dependent hydrolase of metallo-beta-lactamase superfamily TM0207; metallo-hydrolase/oxidoreductase fold, structural genomics; 2.00A {Thermotoga maritima} SCOP: d.157.1.4

Probab=97.43  E-value=3.3e-05  Score=56.04  Aligned_cols=22  Identities=23%  Similarity=0.412  Sum_probs=15.8

Q ss_pred             CCCcCEEEeeccCchhhccHHHH
Q 041025           44 SISLNFLFTSHAHMDHIFTLLVL   66 (99)
Q Consensus        44 ~~~id~IfITH~H~DHigGLp~l   66 (99)
                      ..++|+|||||.|.||++ ++.+
T Consensus        47 ~~~id~VliTH~H~DH~~-~~~l   68 (220)
T 1vjn_A           47 NVTADVVTESHQHFDHNA-HHLV   68 (220)
T ss_dssp             CCBCSEEECSSCC---CG-GGGC
T ss_pred             CCCcCEEEECCCCCCCCC-chHh
Confidence            467999999999999998 7643

>4dik_A Flavoprotein; TM0755, electron transport, DI-iron protein; 1.75A {Thermotoga maritima} PDB: 4dil_A 1vme_A*

Probab=97.36  E-value=7.4e-05  Score=59.81  Aligned_cols=27  Identities=11%  Similarity=0.002  Sum_probs=24.0

Q ss_pred             CCCcCEEEeeccCchhhccHHHHHHHh
Q 041025           44 SISLNFLFTSHAHMDHIFTLLVLHIWR   70 (99)
Q Consensus        44 ~~~id~IfITH~H~DHigGLp~l~~~r   70 (99)
                      ..+||+|++||.|.||+||++.++...
T Consensus        87 ~~~IdyIi~TH~h~DH~G~l~~l~~~~  113 (410)
T 4dik_A           87 PKEITHIIVNHTEPDASGSLPATLKTI  113 (410)
T ss_dssp             GGGCCEEECSCCCHHHHTTHHHHHHHH
T ss_pred             cccCCEEEeCcCCcchhhhHHHHHHHc
Confidence            457999999999999999999998764

>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}

Probab=97.33  E-value=6e-05  Score=60.22  Aligned_cols=25  Identities=16%  Similarity=0.135  Sum_probs=22.5

Q ss_pred             CcCEEEeeccCchhhccHHHHHHHh
Q 041025           46 SLNFLFTSHAHMDHIFTLLVLHIWR   70 (99)
Q Consensus        46 ~id~IfITH~H~DHigGLp~l~~~r   70 (99)
                      +|++||+||.|.||++|++.+....
T Consensus        72 ~i~~Il~TH~H~DH~gg~~~l~~~~   96 (466)
T 3r2u_A           72 TITHAAETHIHADFASGIRDVAIKL   96 (466)
T ss_dssp             EEEEEECSSCCSSSCCCHHHHHHHH
T ss_pred             eeeEEEECCCChhhhccHHHHHHhh
Confidence            5899999999999999999987653

>3kl7_A Putative metal-dependent hydrolase; structural genomics, JOI for structural genomics, JCSG; 2.30A {Parabacteroides distasonis atcc 8503}

Probab=97.32  E-value=0.00012  Score=53.33  Aligned_cols=51  Identities=12%  Similarity=0.112  Sum_probs=31.5

Q ss_pred             hhhhcccceeeecceeee----eeccCCC------CCCCcCEEEeeccCchhhccHHHHHHH
Q 041025           18 EEEKSGRGMQVQGCKVEG----LSIASPS------RSISLNFLFTSHAHMDHIFTLLVLHIW   69 (99)
Q Consensus        18 ~~~~~~~~~~~~G~~v~g----lSigcp~------~~~~id~IfITH~H~DHigGLp~l~~~   69 (99)
                      ...|...-+..+.|-++.    +-+++..      ...++|+|||||.|.||+ |++.+...
T Consensus        27 ~~~~~it~lg~s~~li~~~~~~iliDpg~~~~~~~~~~~id~VliTH~H~DH~-~~~~l~~~   87 (235)
T 3kl7_A           27 GKELTITFIKHGSLMLTYDNHSIQVDPVSEYADYTTFPKADIILITHEHGDHL-DPKAIQAV   87 (235)
T ss_dssp             SCEEEEEEEETTEEEEEETTEEEEESCCTTTCCTTSSCCCSEEEECCSSTTTC-CHHHHHHH
T ss_pred             CCCeEEEEEcceEEEEEECCEEEEECCCCCccchhhCCCCCEEEECCCccccC-CHHHHHHh
Confidence            344555555555555542    3333222      234799999999999999 67666543

>3h3e_A Uncharacterized protein TM1679; structural genomics, surface entropy reduction, ISFI, beta- lactamase superfamily, PSI-2; 2.75A {Thermotoga maritima}

Probab=97.14  E-value=6.5e-05  Score=57.54  Aligned_cols=19  Identities=42%  Similarity=0.501  Sum_probs=18.3

Q ss_pred             CEEEeeccCchhhccHHHH
Q 041025           48 NFLFTSHAHMDHIFTLLVL   66 (99)
Q Consensus        48 d~IfITH~H~DHigGLp~l   66 (99)
                      |+|+|||+|.||++|++.+
T Consensus        63 ~~IvlTH~H~DH~ggl~~l   81 (267)
T 3h3e_A           63 KDVLISHGHYDHAGGLLYL   81 (267)
T ss_dssp             SEEECSCSCHHHHGGGGGC
T ss_pred             CEEEECCCChhhhCCHHHh
Confidence            9999999999999999987

>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*

Probab=96.99  E-value=0.00012  Score=61.57  Aligned_cols=24  Identities=29%  Similarity=0.234  Sum_probs=21.2

Q ss_pred             CCcCEEEeeccCchhhccHHHHHH
Q 041025           45 ISLNFLFTSHAHMDHIFTLLVLHI   68 (99)
Q Consensus        45 ~~id~IfITH~H~DHigGLp~l~~   68 (99)
                      .+|++|++||.|.||++|+..+..
T Consensus       160 ~~I~~IIlTH~H~DH~GG~~~l~~  183 (658)
T 2cfu_A          160 RPIRTVIYSHAHADHFGGVRGLVE  183 (658)
T ss_dssp             CCEEEEECSBSCHHHHTTGGGTCC
T ss_pred             CCceEEEECCCChhhhCCHHHHHh
Confidence            478999999999999999987753

>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}

Probab=95.83  E-value=0.0002  Score=61.05  Aligned_cols=24  Identities=21%  Similarity=0.140  Sum_probs=21.7

Q ss_pred             CCcCEEEeeccCchhhccHHHHHH
Q 041025           45 ISLNFLFTSHAHMDHIFTLLVLHI   68 (99)
Q Consensus        45 ~~id~IfITH~H~DHigGLp~l~~   68 (99)
                      ..|++|++||+|.||++|+..+..
T Consensus       170 ~~I~~IilTH~H~DH~gG~~~l~~  193 (668)
T 2yhe_A          170 KPIVAVVYSHSHIDHFGGARGIID  193 (668)
Confidence            468999999999999999998875

>2p97_A Hypothetical protein; putative metal-dependent hydrolase, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 1.65A {Anabaena variabilis atcc 29413} SCOP: d.157.1.12

Probab=96.31  E-value=0.002  Score=44.97  Aligned_cols=22  Identities=9%  Similarity=0.175  Sum_probs=19.9

Q ss_pred             CcCEEEeeccCchhhccHHHHHHH
Q 041025           46 SLNFLFTSHAHMDHIFTLLVLHIW   69 (99)
Q Consensus        46 ~id~IfITH~H~DHigGLp~l~~~   69 (99)
                      +|++|++||.  ||++|++.+...
T Consensus        56 ~i~~ii~TH~--DH~gg~~~~~~~   77 (201)
T 2p97_A           56 GVVWIVLTNS--DHVRSAKEIADQ   77 (201)
T ss_dssp             CCSEEECSSG--GGCTTHHHHHHH
T ss_pred             CCCEEEECCc--hhhhhHHHHHHh
Confidence            6899999999  999999988754

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	99
d2e7ya1	280	Ribonuclease Z (RNase Z) {Thermotoga maritima [Tax	98.93
d2cbna1	305	Ribonuclease Z (RNase Z) {Escherichia coli [TaxId:	98.86
d1y44a1	307	Ribonuclease Z (RNase Z) {Bacillus subtilis [TaxId	98.79
d2i7ta1	451	Cleavage and polyadenylation specificity factor su	98.72
d2dkfa1	431	Putative RNA-degradation protein TTHA0252 {Thermus	98.51
d1xtoa_	304	Coenzyme PQQ synthesis protein B, PqqB {Pseudomona	98.44
d1wraa1	305	Teichoic acid phosphorylcholine esterase Pce (LytD	98.38
d1zkpa1	244	Hypothetical protein BA1088 (BAS1016) {Bacillus an	98.37
d2i7xa1	514	Cleavage factor two protein 2, CFT2 {Baker's yeast	98.32
d2az4a1	183	Hypothetical protein EF2904 {Enterococcus faecalis	98.28
d1p9ea_	294	Methyl parathion hydrolase {Pseudomonas sp. WBC-3	98.21
d1ztca1	207	Hypothetical protein TM0894 {Thermotoga maritima [	98.16
d2aioa1	266	Zn metallo-beta-lactamase {Xanthomonas maltophilia	97.97
d1vmea2	250	ROO-like flavoprotein TM0755, N-terminal domain {T	97.92
d2q0ia1	298	Quinolone signal response protein PqsE {Pseudomona	97.91
d2gmna1	264	Zn metallo-beta-lactamase {Bradyrhizobium japonicu	97.86
d1e5da2	249	Rubredoxin oxygen:oxidoreductase (ROO), N-terminal	97.82
d1ycga2	249	Nitric oxide reductase N-terminal domain {Moorella	97.82
d1x8ha_	228	Zn metallo-beta-lactamase {Aeromonas hydrophila, C	97.77
d1k07a_	262	Zn metallo-beta-lactamase {Fluoribacter gormanii,	97.74
d1m2xa_	219	Zn metallo-beta-lactamase {Chryseobacterium mening	97.7
d1ko3a_	230	Zn metallo-beta-lactamase {Pseudomonas aeruginosa,	97.65
d1znba_	230	Zn metallo-beta-lactamase {Bacteroides fragilis [T	97.55
d1qh5a_	260	Glyoxalase II (hydroxyacylglutathione hydrolase) {	97.46
d1mqoa_	221	Zn metallo-beta-lactamase {Bacillus cereus [TaxId:	97.44
d2qeda1	251	Glyoxalase II (hydroxyacylglutathione hydrolase) {	97.41
d1jjta_	220	Zn metallo-beta-lactamase {Pseudomonas aeruginosa,	97.4
d1xm8a_	254	Glyoxalase II (hydroxyacylglutathione hydrolase) {	97.18
d2cfua2	505	Alkylsulfatase SdsA1 {Pseudomonas aeruginosa [TaxI	96.43
d1vjna_	209	Hypothetical protein TM0207 {Thermotoga maritima [	96.36
d2p97a1	200	Hypothetical protein Ava3068 {Anabaena variabilis	93.51

>d2e7ya1 d.157.1.7 (A:1-280) Ribonuclease Z (RNase Z) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a+b)
fold: Metallo-hydrolase/oxidoreductase
superfamily: Metallo-hydrolase/oxidoreductase
family: RNase Z-like
domain: Ribonuclease Z (RNase Z)
species: Thermotoga maritima [TaxId: 2336]

Probab=98.93  E-value=3.7e-11  Score=83.75  Aligned_cols=26  Identities=31%  Similarity=0.547  Sum_probs=23.1

Q ss_pred             CCcCEEEeeccCchhhccHHHHHHHh
Q 041025           45 ISLNFLFTSHAHMDHIFTLLVLHIWR   70 (99)
Q Consensus        45 ~~id~IfITH~H~DHigGLp~l~~~r   70 (99)
                      .+||+|||||+|+||++|||.++..+
T Consensus        39 ~~i~~I~ITH~H~DHi~GLp~l~~~~   64 (280)
T d2e7ya1          39 YAFKYVFLTHGHVDHIAGLWGVVNIR   64 (280)
T ss_dssp             GGCCEEECSCCCHHHHTTHHHHHHHH
T ss_pred             ccCCEEEEecCchhhhcCcHHHHHhh
Confidence            46899999999999999999998653

>d2cbna1 d.157.1.7 (A:1-305) Ribonuclease Z (RNase Z) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Metallo-hydrolase/oxidoreductase
superfamily: Metallo-hydrolase/oxidoreductase
family: RNase Z-like
domain: Ribonuclease Z (RNase Z)
species: Escherichia coli [TaxId: 562]

Probab=98.86  E-value=4.1e-10  Score=79.72  Aligned_cols=38  Identities=37%  Similarity=0.427  Sum_probs=31.5

Q ss_pred             CCCCcCEEEeeccCchhhccHHHHHHHhcCCCcCCCcc
Q 041025           43 RSISLNFLFTSHAHMDHIFTLLVLHIWRYSKNKFQPLK   80 (99)
Q Consensus        43 ~~~~id~IfITH~H~DHigGLp~l~~~r~~~~~~~Pl~   80 (99)
                      ++.+||+|||||.|+||++|||.++..++..++..|+.
T Consensus        53 ~~~~i~~IfiTH~H~DHi~Gl~~ll~~~~~~~~~~~l~   90 (305)
T d2cbna1          53 NPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIIQPLT   90 (305)
T ss_dssp             CTTTEEEEECSCCCHHHHTTHHHHHHHHHHTTCCSCEE
T ss_pred             CHHHCcEEEEccccHHHhCchhhhhhhhhccCCccccc
Confidence            45689999999999999999999998887766555543

>d1y44a1 d.157.1.7 (A:1-307) Ribonuclease Z (RNase Z) {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Metallo-hydrolase/oxidoreductase
superfamily: Metallo-hydrolase/oxidoreductase
family: RNase Z-like
domain: Ribonuclease Z (RNase Z)
species: Bacillus subtilis [TaxId: 1423]

Probab=98.79  E-value=9e-10  Score=78.20  Aligned_cols=36  Identities=25%  Similarity=0.268  Sum_probs=30.1

Q ss_pred             CCCcCEEEeeccCchhhccHHHHHHHhcCCCcCCCc
Q 041025           44 SISLNFLFTSHAHMDHIFTLLVLHIWRYSKNKFQPL   79 (99)
Q Consensus        44 ~~~id~IfITH~H~DHigGLp~l~~~r~~~~~~~Pl   79 (99)
                      +.+||+|||||.|+||++|||.++..++..++..|+
T Consensus        53 ~~~i~~I~iTH~H~DH~~Gl~~ll~~~~~~~~~~~l   88 (307)
T d1y44a1          53 PRKIEKIFITHMHGDHVYGLPGLLGSRSFQGGEDEL   88 (307)
T ss_dssp             GGGEEEEECSBCCGGGTTTHHHHHHHHHHTTCCSCE
T ss_pred             hhHCCEEEEcccchHhccchhhhhhhhcccCCCCcc
Confidence            457999999999999999999999887766655554

>d2i7ta1 d.157.1.10 (A:9-459) Cleavage and polyadenylation specificity factor subunit 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Metallo-hydrolase/oxidoreductase
superfamily: Metallo-hydrolase/oxidoreductase
family: beta-CASP RNA-metabolising hydrolases
domain: Cleavage and polyadenylation specificity factor subunit 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.72  E-value=2.6e-09  Score=78.65  Aligned_cols=28  Identities=25%  Similarity=0.283  Sum_probs=24.2

Q ss_pred             CCCcCEEEeeccCchhhccHHHHHHHhc
Q 041025           44 SISLNFLFTSHAHMDHIFTLLVLHIWRY   71 (99)
Q Consensus        44 ~~~id~IfITH~H~DHigGLp~l~~~r~   71 (99)
                      ..+||+|||||+|.||+||||++....+
T Consensus        53 ~~~id~i~lTH~H~DH~ggLp~l~~~~~   80 (451)
T d2i7ta1          53 PAEIDLLLISHFHLDHCGALPWFLQKTS   80 (451)
T ss_dssp             GGGCCEEECCCSSHHHHTTHHHHHHHSS
T ss_pred             HhhCCEEEECCCcHHHhCchHHHHHhcC
Confidence            3478999999999999999999987543

>d2dkfa1 d.157.1.10 (A:1-431) Putative RNA-degradation protein TTHA0252 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a+b)
fold: Metallo-hydrolase/oxidoreductase
superfamily: Metallo-hydrolase/oxidoreductase
family: beta-CASP RNA-metabolising hydrolases
domain: Putative RNA-degradation protein TTHA0252
species: Thermus thermophilus [TaxId: 274]

Probab=98.51  E-value=1.6e-08  Score=76.18  Aligned_cols=34  Identities=24%  Similarity=0.342  Sum_probs=26.6

Q ss_pred             CCCCcCEEEeeccCchhhccHHHHHHHhcCCCcC
Q 041025           43 RSISLNFLFTSHAHMDHIFTLLVLHIWRYSKNKF   76 (99)
Q Consensus        43 ~~~~id~IfITH~H~DHigGLp~l~~~r~~~~~~   76 (99)
                      .+.+||+|||||+|.||+||||+++.......+|
T Consensus        48 ~~~~id~I~iTH~H~DHigglp~l~~~~~~~~i~   81 (431)
T d2dkfa1          48 DPKEVDAVLLTHAHLDHVGRLPKLFREGYRGPVY   81 (431)
T ss_dssp             CGGGCCEEECCSCCSTTTTTHHHHHHTTCCSCEE
T ss_pred             ChhhCCEEEECCCChHHHCchHHHHhcCCCCcEE
Confidence            4457899999999999999999997654433333

>d1xtoa_ d.157.1.6 (A:) Coenzyme PQQ synthesis protein B, PqqB {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Metallo-hydrolase/oxidoreductase
superfamily: Metallo-hydrolase/oxidoreductase
family: Coenzyme PQQ synthesis protein B, PqqB
domain: Coenzyme PQQ synthesis protein B, PqqB
species: Pseudomonas putida [TaxId: 303]

Probab=98.44  E-value=1.4e-08  Score=69.36  Aligned_cols=26  Identities=27%  Similarity=0.382  Sum_probs=22.6

Q ss_pred             CCCCcCEEEeeccCchhhccHHHHHH
Q 041025           43 RSISLNFLFTSHAHMDHIFTLLVLHI   68 (99)
Q Consensus        43 ~~~~id~IfITH~H~DHigGLp~l~~   68 (99)
                      +..+||+|||||.|.||+.||+.|..
T Consensus        77 ~~~~i~~I~iTH~H~DH~~GL~~l~~  102 (304)
T d1xtoa_          77 RDTGINAIVLLDSQIDHTTGLLSLRE  102 (304)
T ss_dssp             SCCSEEEEECSCCCHHHHGGGGGGGG
T ss_pred             CCccceEEEEecCCcCeehhHHHHhh
Confidence            35679999999999999999998743

>d1wraa1 d.157.1.8 (A:30-334) Teichoic acid phosphorylcholine esterase Pce (LytD), N-terminal domain {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a+b)
fold: Metallo-hydrolase/oxidoreductase
superfamily: Metallo-hydrolase/oxidoreductase
family: Pce catalytic domain-like
domain: Teichoic acid phosphorylcholine esterase Pce (LytD), N-terminal domain
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=98.38  E-value=7e-09  Score=73.85  Aligned_cols=28  Identities=29%  Similarity=0.307  Sum_probs=24.3

Q ss_pred             CCcCEEEeeccCchhhccHHHHHHHhcC
Q 041025           45 ISLNFLFTSHAHMDHIFTLLVLHIWRYS   72 (99)
Q Consensus        45 ~~id~IfITH~H~DHigGLp~l~~~r~~   72 (99)
                      .+||+++|||.|.||++|++.++....-
T Consensus        72 ~~ID~lilTH~h~DHigGl~~ll~~~~i   99 (305)
T d1wraa1          72 QKLDFILVTHTHSDHIGNVDELLSTYPV   99 (305)
T ss_dssp             CCEEEEECCCSCHHHHTTHHHHHTTSCE
T ss_pred             CcccEEEECCCCcchhcCHHHHHHhCCC
Confidence            4699999999999999999999875443

>d1zkpa1 d.157.1.9 (A:1-244) Hypothetical protein BA1088 (BAS1016) {Bacillus anthracis [TaxId: 1392]}

class: Alpha and beta proteins (a+b)
fold: Metallo-hydrolase/oxidoreductase
superfamily: Metallo-hydrolase/oxidoreductase
family: YhfI-like
domain: Hypothetical protein BA1088 (BAS1016)
species: Bacillus anthracis [TaxId: 1392]

Probab=98.37  E-value=6.8e-08  Score=66.78  Aligned_cols=26  Identities=27%  Similarity=0.351  Sum_probs=22.8

Q ss_pred             CCCcCEEEeeccCchhhccHHHHHHH
Q 041025           44 SISLNFLFTSHAHMDHIFTLLVLHIW   69 (99)
Q Consensus        44 ~~~id~IfITH~H~DHigGLp~l~~~   69 (99)
                      +.+||+|||||+|.||++|++.+...
T Consensus        49 ~~~id~i~iTH~H~DH~~gl~~l~~~   74 (244)
T d1zkpa1          49 PSDIDAVVLSHYHHDHVADIGVLQYA   74 (244)
T ss_dssp             GGGCCEEECSCCCHHHHTTHHHHHHH
T ss_pred             CccCceEEeecccccccCchhhhhhh
Confidence            45799999999999999999998643

>d2i7xa1 d.157.1.10 (A:1-422,A:626-717) Cleavage factor two protein 2, CFT2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Metallo-hydrolase/oxidoreductase
superfamily: Metallo-hydrolase/oxidoreductase
family: beta-CASP RNA-metabolising hydrolases
domain: Cleavage factor two protein 2, CFT2
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.32  E-value=8.9e-08  Score=75.69  Aligned_cols=25  Identities=8%  Similarity=0.082  Sum_probs=22.7

Q ss_pred             CCcCEEEeeccCchhhccHHHHHHH
Q 041025           45 ISLNFLFTSHAHMDHIFTLLVLHIW   69 (99)
Q Consensus        45 ~~id~IfITH~H~DHigGLp~l~~~   69 (99)
                      .+||+|||||+|.||||+||+|+..
T Consensus        52 ~~IdaillTH~H~DHiGalP~L~~~   76 (514)
T d2i7xa1          52 PEIDVIILSQPTIECLGAHSLLYYN   76 (514)
T ss_dssp             GGCCEEECCCSSHHHHTTHHHHHHH
T ss_pred             ccCCEEEECCCChHHHCchHHHHHh
Confidence            4699999999999999999999754

>d2az4a1 d.157.1.10 (A:56-238) Hypothetical protein EF2904 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Metallo-hydrolase/oxidoreductase
superfamily: Metallo-hydrolase/oxidoreductase
family: beta-CASP RNA-metabolising hydrolases
domain: Hypothetical protein EF2904
species: Enterococcus faecalis [TaxId: 1351]

Probab=98.28  E-value=4.8e-08  Score=66.85  Aligned_cols=24  Identities=33%  Similarity=0.437  Sum_probs=21.1

Q ss_pred             CCCcCEEEeeccCchhhccHHHHH
Q 041025           44 SISLNFLFTSHAHMDHIFTLLVLH   67 (99)
Q Consensus        44 ~~~id~IfITH~H~DHigGLp~l~   67 (99)
                      ..++++|||||+|.||++|++.+.
T Consensus        27 ~~~~~AI~iTH~H~DH~~gl~~l~   50 (183)
T d2az4a1          27 DYQHTAVFLSHAHLDHSRMINYLD   50 (183)
T ss_dssp             CCSEEEEECSCSCHHHHTTGGGBC
T ss_pred             CCceeEEEEcCCChHhhCchHHHh
Confidence            346899999999999999999773

>d1p9ea_ d.157.1.5 (A:) Methyl parathion hydrolase {Pseudomonas sp. WBC-3 [TaxId: 165468]}

class: Alpha and beta proteins (a+b)
fold: Metallo-hydrolase/oxidoreductase
superfamily: Metallo-hydrolase/oxidoreductase
family: Methyl parathion hydrolase
domain: Methyl parathion hydrolase
species: Pseudomonas sp. WBC-3 [TaxId: 165468]

Probab=98.21  E-value=1.1e-07  Score=69.23  Aligned_cols=24  Identities=25%  Similarity=0.459  Sum_probs=20.2

Q ss_pred             CCCCCcCEEEeeccCchhhccHHH
Q 041025           42 SRSISLNFLFTSHAHMDHIFTLLV   65 (99)
Q Consensus        42 ~~~~~id~IfITH~H~DHigGLp~   65 (99)
                      .++.+||+|++||.|.||+||+..
T Consensus       100 i~p~dI~~VilTH~H~DHiGgl~~  123 (294)
T d1p9ea_         100 YQPEQVDEIYITHMHPDHVGGLMV  123 (294)
T ss_dssp             CCGGGCCEEECSCCCHHHHGGGEE
T ss_pred             CCHHHCcEEECCCCCccccCchhh
Confidence            345578999999999999999853

>d1ztca1 d.157.1.11 (A:1-207) Hypothetical protein TM0894 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a+b)
fold: Metallo-hydrolase/oxidoreductase
superfamily: Metallo-hydrolase/oxidoreductase
family: TM0894-like
domain: Hypothetical protein TM0894
species: Thermotoga maritima [TaxId: 2336]

Probab=98.16  E-value=1.4e-07  Score=62.28  Aligned_cols=24  Identities=25%  Similarity=0.556  Sum_probs=20.7

Q ss_pred             CCCcCEEEeeccCchhhccHHHHH
Q 041025           44 SISLNFLFTSHAHMDHIFTLLVLH   67 (99)
Q Consensus        44 ~~~id~IfITH~H~DHigGLp~l~   67 (99)
                      ..+|++|++||.|.||++|++.+.
T Consensus        59 ~~~I~~IiiTH~H~DH~gg~~~~~   82 (207)
T d1ztca1          59 PDDITDVLFTHVHLDHIFNSVLFE   82 (207)
T ss_dssp             GGGCCEEECSCCCHHHHGGGGGCT
T ss_pred             hHHeeEEEeCCCCccccccchhcc
Confidence            346899999999999999998653

>d2aioa1 d.157.1.1 (A:23-311) Zn metallo-beta-lactamase {Xanthomonas maltophilia [TaxId: 40324]}

class: Alpha and beta proteins (a+b)
fold: Metallo-hydrolase/oxidoreductase
superfamily: Metallo-hydrolase/oxidoreductase
family: Zn metallo-beta-lactamase
domain: Zn metallo-beta-lactamase
species: Xanthomonas maltophilia [TaxId: 40324]

Probab=97.97  E-value=1.1e-06  Score=62.41  Aligned_cols=27  Identities=30%  Similarity=0.348  Sum_probs=23.0

Q ss_pred             CCCCcCEEEeeccCchhhccHHHHHHH
Q 041025           43 RSISLNFLFTSHAHMDHIFTLLVLHIW   69 (99)
Q Consensus        43 ~~~~id~IfITH~H~DHigGLp~l~~~   69 (99)
                      .+.+|++|++||.|.||++|++.+...
T Consensus        72 ~~~~I~~Ii~TH~H~DH~gg~~~l~~~   98 (266)
T d2aioa1          72 TPRDLRLILLSHAHADHAGPVAELKRR   98 (266)
T ss_dssp             CGGGEEEEECSCCSHHHHTTHHHHHHH
T ss_pred             ChHHeEEEEecCCCcccccchHHHhhh
Confidence            445689999999999999999998653

>d1vmea2 d.157.1.3 (A:1-250) ROO-like flavoprotein TM0755, N-terminal domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a+b)
fold: Metallo-hydrolase/oxidoreductase
superfamily: Metallo-hydrolase/oxidoreductase
family: ROO N-terminal domain-like
domain: ROO-like flavoprotein TM0755, N-terminal domain
species: Thermotoga maritima [TaxId: 2336]

Probab=97.92  E-value=2e-06  Score=59.64  Aligned_cols=28  Identities=14%  Similarity=0.036  Sum_probs=24.2

Q ss_pred             CCCcCEEEeeccCchhhccHHHHHHHhc
Q 041025           44 SISLNFLFTSHAHMDHIFTLLVLHIWRY   71 (99)
Q Consensus        44 ~~~id~IfITH~H~DHigGLp~l~~~r~   71 (99)
                      ..+|++|++||.|.||+||+..+.....
T Consensus        75 ~~~I~~IilTH~H~DH~Gg~~~~~~~~~  102 (250)
T d1vmea2          75 PKEITHIIVNHTEPDHSGSLPATLKTIG  102 (250)
T ss_dssp             GGGCCEEECSCCCHHHHTTHHHHHHHHC
T ss_pred             cccccEEEECCCChhhhchHHHHHHhcC
Confidence            4579999999999999999999876543

>d2q0ia1 d.157.1.14 (A:1-298) Quinolone signal response protein PqsE {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Metallo-hydrolase/oxidoreductase
superfamily: Metallo-hydrolase/oxidoreductase
family: PqsE-like
domain: Quinolone signal response protein PqsE
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.91  E-value=1.4e-06  Score=62.53  Aligned_cols=27  Identities=22%  Similarity=0.278  Sum_probs=22.9

Q ss_pred             CCCCcCEEEeeccCchhhccHHHHHHH
Q 041025           43 RSISLNFLFTSHAHMDHIFTLLVLHIW   69 (99)
Q Consensus        43 ~~~~id~IfITH~H~DHigGLp~l~~~   69 (99)
                      .+.+|++|++||.|.||+||+..+...
T Consensus        58 ~~~~I~~vi~TH~H~DH~Gg~~~l~~~   84 (298)
T d2q0ia1          58 DPSQVHYWLITHKHYDHCGLLPYLCPR   84 (298)
T ss_dssp             CGGGEEEEECCCCSHHHHTTHHHHGGG
T ss_pred             CchhceEEEeCCCCccccCchhhHHhh
Confidence            345799999999999999999887543

>d2gmna1 d.157.1.1 (A:29-292) Zn metallo-beta-lactamase {Bradyrhizobium japonicum [TaxId: 375]}

class: Alpha and beta proteins (a+b)
fold: Metallo-hydrolase/oxidoreductase
superfamily: Metallo-hydrolase/oxidoreductase
family: Zn metallo-beta-lactamase
domain: Zn metallo-beta-lactamase
species: Bradyrhizobium japonicum [TaxId: 375]

Probab=97.86  E-value=2.2e-06  Score=60.94  Aligned_cols=28  Identities=18%  Similarity=0.334  Sum_probs=23.5

Q ss_pred             CCCCCcCEEEeeccCchhhccHHHHHHH
Q 041025           42 SRSISLNFLFTSHAHMDHIFTLLVLHIW   69 (99)
Q Consensus        42 ~~~~~id~IfITH~H~DHigGLp~l~~~   69 (99)
                      ..+.+|++|++||.|.||++|++.+...
T Consensus        61 ~~~~~I~~ii~TH~H~DH~gg~~~l~~~   88 (264)
T d2gmna1          61 FKVADIKLILNTHAHLDHTGGFAEIKKE   88 (264)
T ss_dssp             CCGGGEEEEECSCCSHHHHTTHHHHHHH
T ss_pred             CCchheEEEEECCCCcccccchhHHHHh
Confidence            3445689999999999999999998654

>d1e5da2 d.157.1.3 (A:2-250) Rubredoxin oxygen:oxidoreductase (ROO), N-terminal domain {Desulfovibrio gigas [TaxId: 879]}

class: Alpha and beta proteins (a+b)
fold: Metallo-hydrolase/oxidoreductase
superfamily: Metallo-hydrolase/oxidoreductase
family: ROO N-terminal domain-like
domain: Rubredoxin oxygen:oxidoreductase (ROO), N-terminal domain
species: Desulfovibrio gigas [TaxId: 879]

Probab=97.82  E-value=4.1e-06  Score=58.53  Aligned_cols=30  Identities=20%  Similarity=0.229  Sum_probs=25.2

Q ss_pred             CCCcCEEEeeccCchhhccHHHHHHHhcCC
Q 041025           44 SISLNFLFTSHAHMDHIFTLLVLHIWRYSK   73 (99)
Q Consensus        44 ~~~id~IfITH~H~DHigGLp~l~~~r~~~   73 (99)
                      ..+|++|++||.|.||++|++.+.......
T Consensus        68 ~~~I~~Ii~TH~H~DH~gg~~~~~~~~~~~   97 (249)
T d1e5da2          68 PKKIDYLVIQHLELDHAGALPALIEACQPE   97 (249)
T ss_dssp             GGGCCEEEECCCSHHHHTTHHHHHHHHCCS
T ss_pred             CCCccEEEeCCcChHhhchHHHHHHHhccc
Confidence            357999999999999999999987765443

>d1ycga2 d.157.1.3 (A:2-250) Nitric oxide reductase N-terminal domain {Moorella thermoacetica [TaxId: 1525]}

class: Alpha and beta proteins (a+b)
fold: Metallo-hydrolase/oxidoreductase
superfamily: Metallo-hydrolase/oxidoreductase
family: ROO N-terminal domain-like
domain: Nitric oxide reductase N-terminal domain
species: Moorella thermoacetica [TaxId: 1525]

Probab=97.82  E-value=4.6e-06  Score=57.94  Aligned_cols=28  Identities=18%  Similarity=0.280  Sum_probs=23.8

Q ss_pred             CCCcCEEEeeccCchhhccHHHHHHHhc
Q 041025           44 SISLNFLFTSHAHMDHIFTLLVLHIWRY   71 (99)
Q Consensus        44 ~~~id~IfITH~H~DHigGLp~l~~~r~   71 (99)
                      ..+|++|++||.|.||+||+..+.....
T Consensus        70 ~~~i~~Ii~TH~H~DH~gg~~~~~~~~~   97 (249)
T d1ycga2          70 PVKLDYLVVNHTESDHAGAFPAIMELCP   97 (249)
T ss_dssp             SCCCSEEEESCCSHHHHTTHHHHHHHCT
T ss_pred             CCCceEEEecccccchhhHHHHHHHhhc
Confidence            3479999999999999999998876543

>d1x8ha_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Aeromonas hydrophila, CphA [TaxId: 644]}

class: Alpha and beta proteins (a+b)
fold: Metallo-hydrolase/oxidoreductase
superfamily: Metallo-hydrolase/oxidoreductase
family: Zn metallo-beta-lactamase
domain: Zn metallo-beta-lactamase
species: Aeromonas hydrophila, CphA [TaxId: 644]

Probab=97.77  E-value=4.5e-06  Score=57.46  Aligned_cols=25  Identities=8%  Similarity=-0.088  Sum_probs=21.5

Q ss_pred             CCCcCEEEeeccCchhhccHHHHHH
Q 041025           44 SISLNFLFTSHAHMDHIFTLLVLHI   68 (99)
Q Consensus        44 ~~~id~IfITH~H~DHigGLp~l~~   68 (99)
                      ...|++|++||+|.||++|++.+..
T Consensus        58 ~~~i~~ii~TH~H~DH~gg~~~~~~   82 (228)
T d1x8ha_          58 RKPVLEVINTNYHTDRAGGNAYWKS   82 (228)
T ss_dssp             CSCEEEEECSSSSHHHHTTHHHHHH
T ss_pred             CCCceEEEECCCCccccccchhhcc
Confidence            3468999999999999999988754

>d1k07a_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Fluoribacter gormanii, (Legionella gormanii) FEZ-1 [TaxId: 464]}

class: Alpha and beta proteins (a+b)
fold: Metallo-hydrolase/oxidoreductase
superfamily: Metallo-hydrolase/oxidoreductase
family: Zn metallo-beta-lactamase
domain: Zn metallo-beta-lactamase
species: Fluoribacter gormanii, (Legionella gormanii) FEZ-1 [TaxId: 464]

Probab=97.74  E-value=4.6e-06  Score=58.49  Aligned_cols=26  Identities=27%  Similarity=0.355  Sum_probs=22.4

Q ss_pred             CCCCcCEEEeeccCchhhccHHHHHH
Q 041025           43 RSISLNFLFTSHAHMDHIFTLLVLHI   68 (99)
Q Consensus        43 ~~~~id~IfITH~H~DHigGLp~l~~   68 (99)
                      ...+|++|++||.|.||++|+..+..
T Consensus        59 ~~~~i~~il~TH~H~DH~gg~~~~~~   84 (262)
T d1k07a_          59 KFSDTKILLISHAHFDHAAGSELIKQ   84 (262)
T ss_dssp             CGGGEEEEECSSSSHHHHTTHHHHHH
T ss_pred             CccceeEEEECCCccccccchhhHhh
Confidence            44578999999999999999988755

>d1m2xa_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Chryseobacterium meningosepticum, carbapenemase BLAB-1 [TaxId: 238]}

class: Alpha and beta proteins (a+b)
fold: Metallo-hydrolase/oxidoreductase
superfamily: Metallo-hydrolase/oxidoreductase
family: Zn metallo-beta-lactamase
domain: Zn metallo-beta-lactamase
species: Chryseobacterium meningosepticum, carbapenemase BLAB-1 [TaxId: 238]

Probab=97.70  E-value=5.4e-06  Score=55.89  Aligned_cols=24  Identities=17%  Similarity=0.080  Sum_probs=21.3

Q ss_pred             CCcCEEEeeccCchhhccHHHHHH
Q 041025           45 ISLNFLFTSHAHMDHIFTLLVLHI   68 (99)
Q Consensus        45 ~~id~IfITH~H~DHigGLp~l~~   68 (99)
                      .+|++|++||.|.||++|+..+..
T Consensus        63 ~~i~~vi~TH~H~DH~gg~~~~~~   86 (219)
T d1m2xa_          63 KKVIMNIATHSHDDRAGGLEYFGK   86 (219)
T ss_dssp             CCEEEEECSSSSTTTTTTHHHHHH
T ss_pred             CceeEEEeCCCCccccCcHHHHHh
Confidence            468999999999999999998854

>d1ko3a_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Pseudomonas aeruginosa, VIM-2 [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Metallo-hydrolase/oxidoreductase
superfamily: Metallo-hydrolase/oxidoreductase
family: Zn metallo-beta-lactamase
domain: Zn metallo-beta-lactamase
species: Pseudomonas aeruginosa, VIM-2 [TaxId: 287]

Probab=97.65  E-value=7.1e-06  Score=55.83  Aligned_cols=25  Identities=20%  Similarity=0.247  Sum_probs=22.1

Q ss_pred             CCCcCEEEeeccCchhhccHHHHHH
Q 041025           44 SISLNFLFTSHAHMDHIFTLLVLHI   68 (99)
Q Consensus        44 ~~~id~IfITH~H~DHigGLp~l~~   68 (99)
                      ..+|++|++||.|.||+||++.+..
T Consensus        73 ~~~i~~ii~TH~H~DH~gg~~~~~~   97 (230)
T d1ko3a_          73 GLPVTRAVSTHFHDDRVGGVDVLRA   97 (230)
T ss_dssp             CCCEEEEECSSSSHHHHTTHHHHHH
T ss_pred             CCeeEEEEECCCCccccCCHHHHhh
Confidence            3478999999999999999999864

>d1znba_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Bacteroides fragilis [TaxId: 817]}

class: Alpha and beta proteins (a+b)
fold: Metallo-hydrolase/oxidoreductase
superfamily: Metallo-hydrolase/oxidoreductase
family: Zn metallo-beta-lactamase
domain: Zn metallo-beta-lactamase
species: Bacteroides fragilis [TaxId: 817]

Probab=97.55  E-value=1e-05  Score=55.35  Aligned_cols=24  Identities=25%  Similarity=0.117  Sum_probs=21.4

Q ss_pred             CcCEEEeeccCchhhccHHHHHHH
Q 041025           46 SLNFLFTSHAHMDHIFTLLVLHIW   69 (99)
Q Consensus        46 ~id~IfITH~H~DHigGLp~l~~~   69 (99)
                      .|++|++||.|.||++|+..+...
T Consensus        72 ~i~~vi~TH~H~DH~gg~~~~~~~   95 (230)
T d1znba_          72 KVTTFIPNHWHGDCIGGLGYLQKK   95 (230)
T ss_dssp             EEEEEECSSSSHHHHTTHHHHHHT
T ss_pred             cceEEEECCCcccccCcHHHHhhh
Confidence            589999999999999999998653

>d1qh5a_ d.157.1.2 (A:) Glyoxalase II (hydroxyacylglutathione hydrolase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Metallo-hydrolase/oxidoreductase
superfamily: Metallo-hydrolase/oxidoreductase
family: Glyoxalase II (hydroxyacylglutathione hydrolase)
domain: Glyoxalase II (hydroxyacylglutathione hydrolase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.46  E-value=1.4e-05  Score=58.84  Aligned_cols=27  Identities=26%  Similarity=0.182  Sum_probs=23.6

Q ss_pred             CcCEEEeeccCchhhccHHHHHHHhcC
Q 041025           46 SLNFLFTSHAHMDHIFTLLVLHIWRYS   72 (99)
Q Consensus        46 ~id~IfITH~H~DHigGLp~l~~~r~~   72 (99)
                      .+.+||+||.|.||++|++.+......
T Consensus        46 ~l~~Il~TH~H~DHi~g~~~l~~~~~~   72 (260)
T d1qh5a_          46 KLTTVLTTHHHWDHAGGNEKLVKLESG   72 (260)
T ss_dssp             EEEEEECCCSSHHHHTTHHHHHHHSTT
T ss_pred             eEEEEEcCCCChhhhccchhhhccccC
Confidence            679999999999999999999876443

>d1mqoa_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Metallo-hydrolase/oxidoreductase
superfamily: Metallo-hydrolase/oxidoreductase
family: Zn metallo-beta-lactamase
domain: Zn metallo-beta-lactamase
species: Bacillus cereus [TaxId: 1396]

Probab=97.44  E-value=2.2e-05  Score=54.45  Aligned_cols=24  Identities=25%  Similarity=0.266  Sum_probs=21.6

Q ss_pred             CcCEEEeeccCchhhccHHHHHHH
Q 041025           46 SLNFLFTSHAHMDHIFTLLVLHIW   69 (99)
Q Consensus        46 ~id~IfITH~H~DHigGLp~l~~~   69 (99)
                      .|.+|++||.|.||++|+..+...
T Consensus        72 pi~~vi~TH~H~DH~gg~~~~~~~   95 (221)
T d1mqoa_          72 RVTDVIITHAHADRIGGIKTLKER   95 (221)
T ss_dssp             CEEEEECCCCSHHHHTTHHHHHHH
T ss_pred             CceEEEECCCCccccCCHHHHhhC
Confidence            589999999999999999988654

>d2qeda1 d.157.1.2 (A:1-251) Glyoxalase II (hydroxyacylglutathione hydrolase) {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a+b)
fold: Metallo-hydrolase/oxidoreductase
superfamily: Metallo-hydrolase/oxidoreductase
family: Glyoxalase II (hydroxyacylglutathione hydrolase)
domain: Glyoxalase II (hydroxyacylglutathione hydrolase)
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.41  E-value=1.7e-05  Score=57.88  Aligned_cols=29  Identities=21%  Similarity=0.146  Sum_probs=24.3

Q ss_pred             CcCEEEeeccCchhhccHHHHHHHhcCCC
Q 041025           46 SLNFLFTSHAHMDHIFTLLVLHIWRYSKN   74 (99)
Q Consensus        46 ~id~IfITH~H~DHigGLp~l~~~r~~~~   74 (99)
                      .+.+||+||.|.||++|++.+........
T Consensus        45 ~l~~Il~TH~H~DHi~g~~~l~~~~~~~~   73 (251)
T d2qeda1          45 MPEAIFLTHHHHDHVGGVKELLQHFPQMT   73 (251)
T ss_dssp             EEEEEECCSCCHHHHTTHHHHHHHCTTCE
T ss_pred             ceeEEEeCCCcccccchhhhHHHhhhcce
Confidence            57899999999999999999887654443

>d1jjta_ d.157.1.1 (A:) Zn metallo-beta-lactamase {Pseudomonas aeruginosa, IMP-1 [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Metallo-hydrolase/oxidoreductase
superfamily: Metallo-hydrolase/oxidoreductase
family: Zn metallo-beta-lactamase
domain: Zn metallo-beta-lactamase
species: Pseudomonas aeruginosa, IMP-1 [TaxId: 287]

Probab=97.40  E-value=2.1e-05  Score=54.40  Aligned_cols=25  Identities=20%  Similarity=0.102  Sum_probs=22.0

Q ss_pred             CCCcCEEEeeccCchhhccHHHHHH
Q 041025           44 SISLNFLFTSHAHMDHIFTLLVLHI   68 (99)
Q Consensus        44 ~~~id~IfITH~H~DHigGLp~l~~   68 (99)
                      ..+|++|++||.|.||++|+..+..
T Consensus        65 ~~~i~~vi~TH~H~DH~gg~~~~~~   89 (220)
T d1jjta_          65 GYKIKGSISSHFHSDSTGGIEWLNS   89 (220)
T ss_dssp             TCEEEEEECSSSSHHHHTTHHHHHH
T ss_pred             CCCeEEEEECCccccccchHHHHHh
Confidence            3479999999999999999998865

>d1xm8a_ d.157.1.2 (A:) Glyoxalase II (hydroxyacylglutathione hydrolase) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Metallo-hydrolase/oxidoreductase
superfamily: Metallo-hydrolase/oxidoreductase
family: Glyoxalase II (hydroxyacylglutathione hydrolase)
domain: Glyoxalase II (hydroxyacylglutathione hydrolase)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.18  E-value=8.7e-05  Score=54.25  Aligned_cols=26  Identities=27%  Similarity=0.317  Sum_probs=22.8

Q ss_pred             CcCEEEeeccCchhhccHHHHHHHhc
Q 041025           46 SLNFLFTSHAHMDHIFTLLVLHIWRY   71 (99)
Q Consensus        46 ~id~IfITH~H~DHigGLp~l~~~r~   71 (99)
                      ++.+|++||.|.||++|...+.....
T Consensus        46 ~l~~Il~TH~H~DH~~g~~~l~~~~~   71 (254)
T d1xm8a_          46 NLTYILNTHHHYDHTGGNLELKDRYG   71 (254)
T ss_dssp             CCCEEECSSCCHHHHTTHHHHHHHHC
T ss_pred             ceeEEecccCcccccCchHHHHhhcC
Confidence            68999999999999999998876543

>d2cfua2 d.157.1.13 (A:20-524) Alkylsulfatase SdsA1 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Metallo-hydrolase/oxidoreductase
superfamily: Metallo-hydrolase/oxidoreductase
family: Alkylsulfatase-like
domain: Alkylsulfatase SdsA1
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.43  E-value=0.00022  Score=56.71  Aligned_cols=22  Identities=32%  Similarity=0.332  Sum_probs=20.0

Q ss_pred             CcCEEEeeccCchhhccHHHHH
Q 041025           46 SLNFLFTSHAHMDHIFTLLVLH   67 (99)
Q Consensus        46 ~id~IfITH~H~DHigGLp~l~   67 (99)
                      .|.+|++||+|.||+||...+.
T Consensus       142 PV~aVI~TH~H~DH~GGa~~~~  163 (505)
T d2cfua2         142 PIRTVIYSHAHADHFGGVRGLV  163 (505)
T ss_dssp             CEEEEECSBSCHHHHTTGGGTC
T ss_pred             CeEEEEeCCCCcchhhhHHHHh
Confidence            6899999999999999987774

>d1vjna_ d.157.1.4 (A:) Hypothetical protein TM0207 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a+b)
fold: Metallo-hydrolase/oxidoreductase
superfamily: Metallo-hydrolase/oxidoreductase
family: Hypothetical protein TM0207
domain: Hypothetical protein TM0207
species: Thermotoga maritima [TaxId: 2336]

Probab=96.36  E-value=0.00057  Score=47.83  Aligned_cols=22  Identities=27%  Similarity=0.460  Sum_probs=14.1

Q ss_pred             CCCCCCCcCEEEeeccCchhhc
Q 041025           40 SPSRSISLNFLFTSHAHMDHIF   61 (99)
Q Consensus        40 cp~~~~~id~IfITH~H~DHig   61 (99)
                      .+.....+|+|||||.|.||..
T Consensus        32 ~~~~~~~~D~VliSH~H~DH~~   53 (209)
T d1vjna_          32 YPIPNVTADVVTESHQHFDHNA   53 (209)
T ss_dssp             -CCCCCBCSEEECSSCC---CG
T ss_pred             CCCccCcCCEEEECCCCCCcCc
Confidence            3445557899999999999963

>d2p97a1 d.157.1.12 (A:1-200) Hypothetical protein Ava3068 {Anabaena variabilis [TaxId: 1172]}

class: Alpha and beta proteins (a+b)
fold: Metallo-hydrolase/oxidoreductase
superfamily: Metallo-hydrolase/oxidoreductase
family: Ava3068-like
domain: Hypothetical protein Ava3068
species: Anabaena variabilis [TaxId: 1172]

Probab=93.51  E-value=0.019  Score=38.77  Aligned_cols=22  Identities=9%  Similarity=0.175  Sum_probs=19.1

Q ss_pred             CcCEEEeeccCchhhccHHHHHHH
Q 041025           46 SLNFLFTSHAHMDHIFTLLVLHIW   69 (99)
Q Consensus        46 ~id~IfITH~H~DHigGLp~l~~~   69 (99)
                      .|++|++||+  ||++|++.+...
T Consensus        55 ~i~~vi~TH~--DH~g~~~~~~~~   76 (200)
T d2p97a1          55 GVVWIVLTNS--DHVRSAKEIADQ   76 (200)
T ss_dssp             CCSEEECSSG--GGCTTHHHHHHH
T ss_pred             CccEEEecCc--cccchHHHHHHh
Confidence            6899999976  999999987664