Citrus Sinensis ID: 041039
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 271 | ||||||
| 356499538 | 266 | PREDICTED: trans-2,3-enoyl-CoA reductase | 0.952 | 0.969 | 0.595 | 2e-87 | |
| 388518111 | 268 | unknown [Medicago truncatula] | 0.974 | 0.985 | 0.560 | 8e-84 | |
| 255637551 | 266 | unknown [Glycine max] | 0.952 | 0.969 | 0.565 | 2e-82 | |
| 225461846 | 259 | PREDICTED: trans-2,3-enoyl-CoA reductase | 0.929 | 0.972 | 0.585 | 4e-80 | |
| 357497777 | 270 | 3-oxo-5-alpha-steroid 4-dehydrogenase [M | 0.977 | 0.981 | 0.565 | 1e-78 | |
| 15237245 | 268 | 3-oxo-5-alpha-steroid 4-dehydrogenase fa | 0.966 | 0.977 | 0.533 | 2e-78 | |
| 449506368 | 266 | PREDICTED: steroid 5-alpha-reductase DET | 0.966 | 0.984 | 0.567 | 3e-78 | |
| 224113361 | 268 | predicted protein [Populus trichocarpa] | 0.955 | 0.966 | 0.554 | 3e-77 | |
| 449434536 | 268 | PREDICTED: LOW QUALITY PROTEIN: steroid | 0.966 | 0.977 | 0.566 | 7e-77 | |
| 449434534 | 274 | PREDICTED: steroid 5-alpha-reductase DET | 0.974 | 0.963 | 0.529 | 4e-76 |
| >gi|356499538|ref|XP_003518596.1| PREDICTED: trans-2,3-enoyl-CoA reductase-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 327 bits (839), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 159/267 (59%), Positives = 200/267 (74%), Gaps = 9/267 (3%)
Query: 5 SIFFPPPVSLSLNIISVGMVVFAASLGYSEIKGKHMKYSKFWNFNSRSIKSAKKKEINIS 64
S FPPP SL ++ +SV +V A+ G+SEI+GKH+ YSKFWN N + +K++ +S
Sbjct: 9 SFIFPPPSSLVVSGMSVISLVSLANAGFSEIRGKHLNYSKFWNANPSA-----EKQVKLS 63
Query: 65 SKIGMLLFYTPSFFAGLASLWLCPFEGFRFRLLTSALTFHFFKRIFEVLFIHKYSGGMVL 124
SK GMLL YTP+F AGLAS W+ P +G R LL SA+T HFFKR+FEV+FIHKYSG M+L
Sbjct: 64 SKAGMLLLYTPAFLAGLASFWIFPHQGLRSTLLQSAVTLHFFKRVFEVVFIHKYSGAMLL 123
Query: 125 DSAIVVSLGYVITTTTMIYIQRLSQREELILDQPTIDLKFVGIILFCLGISGNFYHHYLL 184
DSAI ++L Y ++T TMIY Q L+Q L +P IDL + GI+LF +GI GNFYHHYLL
Sbjct: 124 DSAIPITLSYFLSTATMIYAQHLTQG----LPEPPIDLLYPGIVLFVVGIIGNFYHHYLL 179
Query: 185 SRMRRNGEKEYRIPTGGLFDKVVCPHYLFELIEFWGIFFISQTLYAFCNALGVTFYLMGR 244
S +R GEKEY+IP GG+F+ V+CPHYLFE+IEF+G FISQTLYAF +G T YL+GR
Sbjct: 180 SNLRGKGEKEYKIPKGGMFELVICPHYLFEIIEFYGFSFISQTLYAFSFTVGTTLYLLGR 239
Query: 245 SYITRTWYLCKFEHFPKHVKALFPYIF 271
SY TR WYL KFE FPK VKA+ P++F
Sbjct: 240 SYSTRKWYLSKFEDFPKDVKAIIPFVF 266
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|388518111|gb|AFK47117.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|255637551|gb|ACU19102.1| unknown [Glycine max] | Back alignment and taxonomy information |
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| >gi|225461846|ref|XP_002285664.1| PREDICTED: trans-2,3-enoyl-CoA reductase [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|357497777|ref|XP_003619177.1| 3-oxo-5-alpha-steroid 4-dehydrogenase [Medicago truncatula] gi|355494192|gb|AES75395.1| 3-oxo-5-alpha-steroid 4-dehydrogenase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|15237245|ref|NP_197105.1| 3-oxo-5-alpha-steroid 4-dehydrogenase family protein [Arabidopsis thaliana] gi|14190513|gb|AAK55737.1|AF380656_1 AT5g16010/F1N13_150 [Arabidopsis thaliana] gi|9755647|emb|CAC01800.1| steroid 5alpha-reductase-like protein [Arabidopsis thaliana] gi|24797018|gb|AAN64521.1| At5g16010/F1N13_150 [Arabidopsis thaliana] gi|332004851|gb|AED92234.1| 3-oxo-5-alpha-steroid 4-dehydrogenase family protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|449506368|ref|XP_004162730.1| PREDICTED: steroid 5-alpha-reductase DET2-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|224113361|ref|XP_002316469.1| predicted protein [Populus trichocarpa] gi|222865509|gb|EEF02640.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|449434536|ref|XP_004135052.1| PREDICTED: LOW QUALITY PROTEIN: steroid 5-alpha-reductase DET2-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|449434534|ref|XP_004135051.1| PREDICTED: steroid 5-alpha-reductase DET2-like [Cucumis sativus] gi|449506334|ref|XP_004162719.1| PREDICTED: steroid 5-alpha-reductase DET2-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 271 | ||||||
| TAIR|locus:2146112 | 268 | AT5G16010 "AT5G16010" [Arabido | 0.966 | 0.977 | 0.533 | 9e-77 | |
| UNIPROTKB|Q2QDF6 | 258 | DET2 "Steroid 5-alpha-reductas | 0.642 | 0.674 | 0.291 | 2e-15 | |
| UNIPROTKB|P31213 | 254 | SRD5A2 "3-oxo-5-alpha-steroid | 0.778 | 0.830 | 0.285 | 2.6e-15 | |
| UNIPROTKB|F1PEK6 | 255 | SRD5A1 "Uncharacterized protei | 0.678 | 0.721 | 0.290 | 6.9e-15 | |
| ZFIN|ZDB-GENE-050417-199 | 252 | srd5a2a "steroid-5-alpha-reduc | 0.763 | 0.821 | 0.255 | 6.9e-15 | |
| MGI|MGI:2150380 | 254 | Srd5a2 "steroid 5 alpha-reduct | 0.826 | 0.881 | 0.281 | 8.8e-15 | |
| UNIPROTKB|J9NXF5 | 254 | SRD5A2 "Uncharacterized protei | 0.413 | 0.440 | 0.389 | 1.1e-14 | |
| MGI|MGI:98400 | 255 | Srd5a1 "steroid 5 alpha-reduct | 0.634 | 0.674 | 0.303 | 2.8e-14 | |
| UNIPROTKB|F1NUW1 | 257 | SRD5A2 "Uncharacterized protei | 0.405 | 0.428 | 0.380 | 3.1e-14 | |
| UNIPROTKB|E1BJY8 | 254 | SRD5A2 "Uncharacterized protei | 0.409 | 0.437 | 0.392 | 3.3e-14 |
| TAIR|locus:2146112 AT5G16010 "AT5G16010" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 773 (277.2 bits), Expect = 9.0e-77, P = 9.0e-77
Identities = 143/268 (53%), Positives = 195/268 (72%)
Query: 5 SIFFPPPVSLSLNIISVGMVVFAASLGYSEIKGKHMKYSKFWNFNSRSIKSAKKKEINIS 64
S +PPP S+ LN +SV V A++G+SEI+G H+KYSKF +S S + K++ +IS
Sbjct: 6 SFVYPPPPSILLNCMSVVGVAALANIGWSEIRGNHLKYSKF-GVSSSSPQPQKERFGSIS 64
Query: 65 SKIGMLLFYTPSFFAGLASLWLCPFEGFRFRLLTSALTFHFFKRIFEVLFIHKYSGGMVL 124
S+ GMLL YTP+F A +S ++ P + RF LL SAL HFFKR+FEVLFIHKYSGGM +
Sbjct: 65 SRNGMLLLYTPAFLAAASSFFVVPSDDLRFLLLKSALALHFFKRVFEVLFIHKYSGGMAI 124
Query: 125 DSAIVVSLGYVITTTTMIYIQRLSQREELILDQPTIDLKFVGIILFCLGISGNFYHHYLL 184
DSA+ +S Y +T M+Y Q L+ L L +P+ D+K G+++F +GI GN YHH LL
Sbjct: 125 DSALTISSSYFSSTALMLYSQNLT----LGLTEPSFDMKLAGVVMFVVGIVGNLYHHVLL 180
Query: 185 SRMRR-NGEKEYRIPTGGLFDKVVCPHYLFELIEFWGIFFISQTLYAFCNALGVTFYLMG 243
+++R+ +G+KEY+IP GGLFD ++CPHYLFE++ FW F ISQT+Y+F A+G YL+G
Sbjct: 181 AKLRKEDGKKEYKIPKGGLFDIIICPHYLFEILVFWSFFLISQTIYSFSFAMGTMLYLIG 240
Query: 244 RSYITRTWYLCKFEHFPKHVKALFPYIF 271
RSY TRTWYL KF+ FPKH+KAL P++F
Sbjct: 241 RSYATRTWYLSKFDDFPKHIKALIPFVF 268
|
|
| UNIPROTKB|Q2QDF6 DET2 "Steroid 5-alpha-reductase DET2" [Gossypium hirsutum (taxid:3635)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|P31213 SRD5A2 "3-oxo-5-alpha-steroid 4-dehydrogenase 2" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1PEK6 SRD5A1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
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| ZFIN|ZDB-GENE-050417-199 srd5a2a "steroid-5-alpha-reductase, alpha polypeptide 2a" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:2150380 Srd5a2 "steroid 5 alpha-reductase 2" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|J9NXF5 SRD5A2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:98400 Srd5a1 "steroid 5 alpha-reductase 1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1NUW1 SRD5A2 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|E1BJY8 SRD5A2 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| GSVIVG00027946001 | SubName- Full=Chromosome chr19 scaffold_4, whole genome shotgun sequence; (259 aa) | |||||||
(Vitis vinifera) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 271 | |||
| pfam02544 | 150 | pfam02544, Steroid_dh, 3-oxo-5-alpha-steroid 4-deh | 4e-21 | |
| PLN02560 | 308 | PLN02560, PLN02560, enoyl-CoA reductase | 9e-12 | |
| PLN03164 | 323 | PLN03164, PLN03164, 3-oxo-5-alpha-steroid 4-dehydr | 8e-11 | |
| PLN02392 | 260 | PLN02392, PLN02392, probable steroid reductase DET | 3e-09 |
| >gnl|CDD|217095 pfam02544, Steroid_dh, 3-oxo-5-alpha-steroid 4-dehydrogenase | Back alignment and domain information |
|---|
Score = 86.3 bits (214), Expect = 4e-21
Identities = 42/113 (37%), Positives = 59/113 (52%)
Query: 159 TIDLKFVGIILFCLGISGNFYHHYLLSRMRRNGEKEYRIPTGGLFDKVVCPHYLFELIEF 218
T +GI LF G+ N +L +R+ G Y+IP GGLF+ V CP+Y E++E+
Sbjct: 38 TDPRFLIGIGLFVTGMLINIKSDIILRTLRKPGNTGYKIPRGGLFELVSCPNYFGEIMEW 97
Query: 219 WGIFFISQTLYAFCNALGVTFYLMGRSYITRTWYLCKFEHFPKHVKALFPYIF 271
G + +L A A L R+ WYL KFE +PK KAL P++F
Sbjct: 98 IGYALATWSLPALAFAFFTVCNLTPRAKAHHKWYLKKFEKYPKSRKALIPFVF 150
|
This family consists of 3-oxo-5-alpha-steroid 4-dehydrogenases, EC:1.3.99.5 Also known as Steroid 5-alpha-reductase, the reaction catalyzed by this enzyme is: 3-oxo-5-alpha-steroid + acceptor <=> 3-oxo-delta(4)-steroid + reduced acceptor. The Steroid 5-alpha-reductase enzyme is responsible for the formation of dihydrotestosterone, this hormone promotes the differentiation of male external genitalia and the prostate during fetal development. In humans mutations in this enzyme can cause a form of male pseudohermaphorditism in which the external genitalia and prostate fail to develop normally. A related enzyme is also found in plants is DET2, a steroid reductase from Arabidopsis. Mutations in this enzyme cause defects in light-regulated development. Length = 150 |
| >gnl|CDD|178174 PLN02560, PLN02560, enoyl-CoA reductase | Back alignment and domain information |
|---|
| >gnl|CDD|215610 PLN03164, PLN03164, 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal domain containing protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|178015 PLN02392, PLN02392, probable steroid reductase DET2 | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 271 | |||
| KOG1638 | 257 | consensus Steroid reductase [Lipid transport and m | 100.0 | |
| PLN02392 | 260 | probable steroid reductase DET2 | 100.0 | |
| PLN02560 | 308 | enoyl-CoA reductase | 100.0 | |
| PLN03164 | 323 | 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal | 100.0 | |
| KOG1639 | 297 | consensus Steroid reductase required for elongatio | 100.0 | |
| PF02544 | 150 | Steroid_dh: 3-oxo-5-alpha-steroid 4-dehydrogenase | 100.0 | |
| KOG1640 | 304 | consensus Predicted steroid reductase [Lipid trans | 100.0 | |
| PF06966 | 235 | DUF1295: Protein of unknown function (DUF1295); In | 99.68 | |
| COG3752 | 272 | Steroid 5-alpha reductase family enzyme [General f | 99.61 | |
| KOG4650 | 311 | consensus Predicted steroid reductase [General fun | 99.04 | |
| PF01222 | 432 | ERG4_ERG24: Ergosterol biosynthesis ERG4/ERG24 fam | 98.86 | |
| PF04191 | 106 | PEMT: Phospholipid methyltransferase ; InterPro: I | 98.73 | |
| COG2020 | 187 | STE14 Putative protein-S-isoprenylcysteine methylt | 98.44 | |
| KOG1435 | 428 | consensus Sterol reductase/lamin B receptor [Lipid | 98.37 | |
| PF04140 | 94 | ICMT: Isoprenylcysteine carboxyl methyltransferase | 97.75 | |
| KOG2628 | 201 | consensus Farnesyl cysteine-carboxyl methyltransfe | 97.25 | |
| COG1755 | 172 | Uncharacterized protein conserved in bacteria [Fun | 96.47 |
| >KOG1638 consensus Steroid reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-66 Score=453.53 Aligned_cols=249 Identities=28% Similarity=0.397 Sum_probs=207.5
Q ss_pred ccCCChhhHHHHHHHHHHHHHHHHHHHhhhccccCCCCccccCccccccccCCccccccchhhHHhhhhHHHHHHHHHhh
Q 041039 7 FFPPPVSLSLNIISVGMVVFAASLGYSEIKGKHMKYSKFWNFNSRSIKSAKKKEINISSKIGMLLFYTPSFFAGLASLWL 86 (271)
Q Consensus 7 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ygk~~~~~~~~~~~~~~~~~~i~~r~~w~~~e~p~~~~~~~~~~~ 86 (271)
..|+.+...+..++++....++..++.+.++ ++|||+ +++-. + .+..+|+|.+|++||.|+++++++.+..
T Consensus 3 ~~~~~~~il~~~~~~~~~~~~~~~~l~~~~k--s~yGr~--s~s~~--~---~~~~ip~~~aw~iqe~Paf~~pl~~~~~ 73 (257)
T KOG1638|consen 3 VYPLREIILAGSWTLIGAGALAFLALKRQRK--SGYGRH--SSSLN--P---TKTRIPPRIAWFIQELPAFAIPLYSLFR 73 (257)
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHhhccc--cCCcee--cCCCc--c---hhcCCCchhHHHHhcCcHHHhhHHHhcC
Confidence 4566666666677777766666665555553 999999 44322 1 2234999999999999999999998888
Q ss_pred CCCCc-hhHHHHHHHHHHHHHHHHHhhhheecccCCcchhhHHHHHHHHHHHHHHHHhhhc-----ccchhhhccCCchh
Q 041039 87 CPFEG-FRFRLLTSALTFHFFKRIFEVLFIHKYSGGMVLDSAIVVSLGYVITTTTMIYIQR-----LSQREELILDQPTI 160 (271)
Q Consensus 87 ~p~~~-~~~~ll~~l~~lHy~~R~~e~~fv~~~s~~m~~~~~~~~~~~y~~~~~~~~~~~~-----~~~~~~~~~~~p~~ 160 (271)
.|+++ .+..+|.+++++||++|++|++|+++.+++||+.... ..+.+|.++++.|+ .+.+++.|.+++
T Consensus 74 ~~~~~~~~~~~L~~~flvHYf~R~liypf~~~~~~~~p~~i~a----~a~~F~~~NG~lqg~y~~~~~~~~d~~~~~~-- 147 (257)
T KOG1638|consen 74 GPSSDLPPGLLLLSAFLVHYFHRALIYPFLIRSSNPSPAIIVA----LAIAFCTLNGTLQGLYLSHYQLYEDPWVTDI-- 147 (257)
T ss_pred CCcccccccHHHHHHHHHHHHHHHHhheeeecCCCCccHHHHH----HHHHHHHhhHHHHHHHHHhcccccCCCchhH--
Confidence 77654 5778999999999999999999999988888865544 44445666655553 333333344333
Q ss_pred hHHHHHHHHHHHHHHhHHHHHHHHHhcccCCCccccccccCcccccccccchhHHHHHHHHHHHhhhHHHHHHHHHHHHH
Q 041039 161 DLKFVGIILFCLGISGNFYHHYLLSRMRRNGEKEYRIPTGGLFDKVVCPHYLFELIEFWGIFFISQTLYAFCNALGVTFY 240 (271)
Q Consensus 161 ~~~~~g~~lf~~g~~~n~~~~~~L~~LR~~~~~~y~iP~gglF~~Vs~PnY~~Eil~w~g~al~~~~~~~~~~~~~~~~~ 240 (271)
+..+|+.+|+.||++|++||.+|++|||+++++||||+||||||||||||||||+||+|+|+++|+++++.|++++++|
T Consensus 148 -r~liG~~lfv~Gm~iN~~sD~iL~~LRk~~~~~YkIP~GglFeyVsCPNYfgEiieW~Gyal~~ws~p~~aFa~ft~~~ 226 (257)
T KOG1638|consen 148 -RFLIGVVLFVTGMLINIYSDNILRTLRKPGGKGYKIPRGGLFEYVSCPNYFGEIIEWIGYALASWSLPALAFAFFTICN 226 (257)
T ss_pred -HHHHHHHHHHHHhhhhhhhHHHHHHhhcCCCCceecCCCceEEEeecchHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 5789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcccCCCCcceeccccC
Q 041039 241 LMGRSYITRTWYLCKFEHFPKHVKALFPYIF 271 (271)
Q Consensus 241 l~~rA~~~h~wY~~kF~~Yp~~RkalIPfI~ 271 (271)
+++||.++|+||+||||||||+|||+||||+
T Consensus 227 l~pRA~ahH~WY~~kFe~YPk~RkAlIPfvf 257 (257)
T KOG1638|consen 227 LGPRAYAHHKWYLKKFEDYPKNRKALIPFVF 257 (257)
T ss_pred hhHHHHHHHHHHHHhhccCCccceeeccccC
Confidence 9999999999999999999999999999986
|
|
| >PLN02392 probable steroid reductase DET2 | Back alignment and domain information |
|---|
| >PLN02560 enoyl-CoA reductase | Back alignment and domain information |
|---|
| >PLN03164 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal domain containing protein; Provisional | Back alignment and domain information |
|---|
| >KOG1639 consensus Steroid reductase required for elongation of the very long chain fatty acids [Lipid transport and metabolism] | Back alignment and domain information |
|---|
| >PF02544 Steroid_dh: 3-oxo-5-alpha-steroid 4-dehydrogenase ; InterPro: IPR001104 Synonym(s): Steroid 5-alpha-reductase 3-oxo-5-alpha-steroid 4-dehydrogenases, 1 | Back alignment and domain information |
|---|
| >KOG1640 consensus Predicted steroid reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
| >PF06966 DUF1295: Protein of unknown function (DUF1295); InterPro: IPR010721 This family contains a number of bacterial and eukaryotic proteins of unknown function that are approximately 300 residues long | Back alignment and domain information |
|---|
| >COG3752 Steroid 5-alpha reductase family enzyme [General function prediction only] | Back alignment and domain information |
|---|
| >KOG4650 consensus Predicted steroid reductase [General function prediction only] | Back alignment and domain information |
|---|
| >PF01222 ERG4_ERG24: Ergosterol biosynthesis ERG4/ERG24 family; InterPro: IPR001171 The two fungal enzymes, C-14 sterol reductase (gene ERG24 in budding yeast and erg3 in Neurospora crassa) and C-24(28) sterol reductase (gene ERG4 in budding yeast and sts1 in fission yeast), are involved in ergosterol biosynthesis | Back alignment and domain information |
|---|
| >PF04191 PEMT: Phospholipid methyltransferase ; InterPro: IPR007318 The Saccharomyces cerevisiae (Baker's yeast) phospholipid methyltransferase (2 | Back alignment and domain information |
|---|
| >COG2020 STE14 Putative protein-S-isoprenylcysteine methyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG1435 consensus Sterol reductase/lamin B receptor [Lipid transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF04140 ICMT: Isoprenylcysteine carboxyl methyltransferase (ICMT) family ; InterPro: IPR007269 The isoprenylcysteine o-methyltransferase (2 | Back alignment and domain information |
|---|
| >KOG2628 consensus Farnesyl cysteine-carboxyl methyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >COG1755 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 271 | |||
| 4a2n_B | 194 | Isoprenylcysteine carboxyl methyltransferase; memb | 99.47 |
| >4a2n_B Isoprenylcysteine carboxyl methyltransferase; membrane protein, RAS and RHO gtpases signallin; HET: SAH PLM CDL; 3.40A {Methanosarcina acetivorans} | Back alignment and structure |
|---|
Probab=99.47 E-value=1.3e-12 Score=112.76 Aligned_cols=110 Identities=13% Similarity=0.125 Sum_probs=85.0
Q ss_pred hHHHHHHHHHHHHHHhHHHHHHHHHh-ccc--CCCccccccccCcccccccccchhHHHHHHHHHHHhhhHHHHHH--HH
Q 041039 161 DLKFVGIILFCLGISGNFYHHYLLSR-MRR--NGEKEYRIPTGGLFDKVVCPHYLFELIEFWGIFFISQTLYAFCN--AL 235 (271)
Q Consensus 161 ~~~~~g~~lf~~g~~~n~~~~~~L~~-LR~--~~~~~y~iP~gglF~~Vs~PnY~~Eil~w~g~al~~~~~~~~~~--~~ 235 (271)
...++|+++++.|......+|.+|.+ ++. +.+++.++.+.|+|++++||||+||+++|+|++++++++.+++. ..
T Consensus 76 ~~~~~G~~l~l~G~~l~~~a~~~Lg~~f~~~~~~~~~~~Lvt~G~y~~vRHP~Y~G~~l~~~g~~l~~~s~~~~~~~~~~ 155 (194)
T 4a2n_B 76 SIRLFALIVTFLNIGLFTKIHKDLGNNWSAILEIKDGHKLVKEGIYKNIRHPMYAHLWLWVITQGIILSNWVVLIFGIVA 155 (194)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHGGGCCSSCCEETTCCCCCSSTTTTBSSHHHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCeeeecCcchhccCccHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 45789999999999999999999954 443 23567889999999999999999999999999999988766542 22
Q ss_pred HHHHHHHHHHHHHHHHHHHhc----ccCCCCcceeccccC
Q 041039 236 GVTFYLMGRSYITRTWYLCKF----EHFPKHVKALFPYIF 271 (271)
Q Consensus 236 ~~~~~l~~rA~~~h~wY~~kF----~~Yp~~RkalIPfI~ 271 (271)
++.. +..|+...+++.+++| +||.++.+++||+|.
T Consensus 156 ~~~~-~~~ri~~EE~~L~~~fG~~Y~~Y~~rv~r~iP~i~ 194 (194)
T 4a2n_B 156 WAIL-YFIRVPKEEELLIEEFGDEYIEYMGKTGRLFPKVV 194 (194)
T ss_dssp HHHH-HHHHHHHHHHHHHHHHTHHHHHHHHHCBSSSCC--
T ss_pred HHHH-HHHHHHHHHHHHHHHhCHHHHHHHHhCCeeCceeC
Confidence 3333 3456666666677766 467778889999974
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00