Citrus Sinensis ID: 041039


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-
MFFASIFFPPPVSLSLNIISVGMVVFAASLGYSEIKGKHMKYSKFWNFNSRSIKSAKKKEINISSKIGMLLFYTPSFFAGLASLWLCPFEGFRFRLLTSALTFHFFKRIFEVLFIHKYSGGMVLDSAIVVSLGYVITTTTMIYIQRLSQREELILDQPTIDLKFVGIILFCLGISGNFYHHYLLSRMRRNGEKEYRIPTGGLFDKVVCPHYLFELIEFWGIFFISQTLYAFCNALGVTFYLMGRSYITRTWYLCKFEHFPKHVKALFPYIF
cccccccccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHcEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEccccccccEEccccccHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEccccc
ccHHHHccccHHHHHHHHHHHHHHHHHHHHccHcccccccccccccccccccccccccccccccHHHHHHHHHcHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEccccccEEEEccHcHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEEcc
mffasiffpppvslslNIISVGMVVFAASLGyseikgkhmkyskfwnfnsrsikSAKKKEINISSKIGMLLFYTPSFFAGLAslwlcpfegFRFRLLTSALTFHFFKRIFEVLFIHKYSGGMVLDSAIVVSLGYVITTTTMIYIQRLSQREElildqptidlkFVGIILFCLGISGNFYHHYLLSRMrrngekeyriptgglfdkvvcphYLFELIEFWGIFFISQTLYAFCNALGVTFYLMGRSYITRTWYLCKFEHFPKHVKALFPYIF
MFFASIFFPPPVSLSLNIISVGMVVFAASLGYSEIKGKHMKYSKFWNFNSRSIKSAKKKEINISSKIGMLLFYTPSFFAGLASLWLCPFEGFRFRLLTSALTFHFFKRIFEVLFIHKYSGGMVLDSAIVVSLGYVITTTTMIYIQRLSQREELILDQPTIDLKFVGIILFCLGISGNFYHHYLLSRMRRNGEKEYRIPTGGLFDKVVCPHYLFELIEFWGIFFISQTLYAFCNALGVTFYLMGRSYITRTWYLCKFEHFPKHVkalfpyif
MFFASIFFPPPVSLSLNIISVGMVVFAASLGYSEIKGKHMKYSKFWNFNSRSIKSAKKKEINISSKIGMLLFYTPSFFAGLASLWLCPFEGFRFRLLTSALTFHFFKRIFEVLFIHKYSGGMVLDSAIVVSLGYVITTTTMIYIQRLSQREELILDQPTIDLKFVGIILFCLGISGNFYHHYLLSRMRRNGEKEYRIPTGGLFDKVVCPHYLFELIEFWGIFFISQTLYAFCNALGVTFYLMGRSYITRTWYLCKFEHFPKHVKALFPYIF
*FFASIFFPPPVSLSLNIISVGMVVFAASLGYSEIKGKHMKYSKFWNFNSRSIKSAKKKEINISSKIGMLLFYTPSFFAGLASLWLCPFEGFRFRLLTSALTFHFFKRIFEVLFIHKYSGGMVLDSAIVVSLGYVITTTTMIYIQRLSQREELILDQPTIDLKFVGIILFCLGISGNFYHHYLLSRMRRNGEKEYRIPTGGLFDKVVCPHYLFELIEFWGIFFISQTLYAFCNALGVTFYLMGRSYITRTWYLCKFEHFPKHVKALFPYI*
*FFASIFFPPPVSLSLNIISVGMVVFAASLGYSEIKGKHMKYSKFWNF*S***KSAKKKEINISSKIGMLLFYTPSFFAGLASLWLCPFEGFRFRLLTSALTFHFFKRIFEVLFIHKYSGGMVLDSAIVVSLGYVITTTTMIYIQRLSQREELILDQPTIDLKFVGIILFCLGISGNFYHHYLLSRMRRNGEKEYRIPTGGLFDKVVCPHYLFELIEFWGIFFISQTLYAFCNALGVTFYLMGRSYITRTWYLCKFEHFPKHVKALFPYIF
MFFASIFFPPPVSLSLNIISVGMVVFAASLGYSEIKGKHMKYSKFWNFNSRSIKSAKKKEINISSKIGMLLFYTPSFFAGLASLWLCPFEGFRFRLLTSALTFHFFKRIFEVLFIHKYSGGMVLDSAIVVSLGYVITTTTMIYIQRLSQREELILDQPTIDLKFVGIILFCLGISGNFYHHYLLSRMRRNGEKEYRIPTGGLFDKVVCPHYLFELIEFWGIFFISQTLYAFCNALGVTFYLMGRSYITRTWYLCKFEHFPKHVKALFPYIF
MFFASIFFPPPVSLSLNIISVGMVVFAASLGYSEIKGKHMKYSKFWNFNSRSIKSAKKKEINISSKIGMLLFYTPSFFAGLASLWLCPFEGFRFRLLTSALTFHFFKRIFEVLFIHKYSGGMVLDSAIVVSLGYVITTTTMIYIQRLSQREELILDQPTIDLKFVGIILFCLGISGNFYHHYLLSRMRRNGEKEYRIPTGGLFDKVVCPHYLFELIEFWGIFFISQTLYAFCNALGVTFYLMGRSYITRTWYLCKFEHFPKHVKALFPYIF
oooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooo
oooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MFFASIFFPPPVSLSLNIISVGMVVFAASLGYSEIKGKHMKYSKFWNFNSRSIKSAKKKEINISSKIGMLLFYTPSFFAGLASLWLCPFEGFRFRLLTSALTFHFFKRIFEVLFIHKYSGGMVLDSAIVVSLGYVITTTTMIYIQRLSQREELILDQPTIDLKFVGIILFCLGISGNFYHHYLLSRMRRNGEKEYRIPTGGLFDKVVCPHYLFELIEFWGIFFISQTLYAFCNALGVTFYLMGRSYITRTWYLCKFEHFPKHVKALFPYIF
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query271 2.2.26 [Sep-21-2011]
Q2QDF6258 Steroid 5-alpha-reductase N/A no 0.642 0.674 0.291 4e-13
P31213254 3-oxo-5-alpha-steroid 4-d yes no 0.793 0.846 0.280 4e-13
Q28892254 3-oxo-5-alpha-steroid 4-d N/A no 0.409 0.437 0.392 2e-12
O18765254 3-oxo-5-alpha-steroid 4-d yes no 0.409 0.437 0.375 3e-11
P31214254 3-oxo-5-alpha-steroid 4-d yes no 0.409 0.437 0.375 4e-11
Q99N99254 3-oxo-5-alpha-steroid 4-d yes no 0.409 0.437 0.366 4e-11
Q28891263 3-oxo-5-alpha-steroid 4-d N/A no 0.428 0.441 0.333 6e-11
Q68FF9255 3-oxo-5-alpha-steroid 4-d no no 0.457 0.486 0.346 8e-11
P24008259 3-oxo-5-alpha-steroid 4-d no no 0.476 0.498 0.335 9e-11
P18405259 3-oxo-5-alpha-steroid 4-d no no 0.428 0.447 0.324 2e-10
>sp|Q2QDF6|DET2_GOSHI Steroid 5-alpha-reductase DET2 OS=Gossypium hirsutum GN=DET2 PE=1 SV=1 Back     alignment and function desciption
 Score = 75.5 bits (184), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 53/182 (29%), Positives = 96/182 (52%), Gaps = 8/182 (4%)

Query: 96  LLTSALTFHFFKRIFEVLFIHKYSGGMVLDSAIVVSLGYVITTTTMI--YIQR--LSQRE 151
           LL S   FH+F R   VL+  + +          VS+ ++     ++  Y+Q   +S  +
Sbjct: 79  LLISPFLFHYFNRT--VLYPLRLARNTTQTRGFPVSVAFMAFGFNLLNGYLQARWVSHYK 136

Query: 152 ELILDQPTIDLKFV-GIILFCLGISGNFYHHYLLSRMRRNGEKEYRIPTGGLFDKVVCPH 210
           +   ++     +F+ G+++F +G+  N     +L  +++ G+  Y+IP GGLF+ V CP+
Sbjct: 137 DDYENEELFWWRFLAGLLIFVVGMWVNVRADKVLVGLKKQGDGGYKIPRGGLFELVSCPN 196

Query: 211 YLFELIEFWGIFFISQTLYAFCNALGVTFYLMGRSYITRTWYLCKF-EHFPKHVKALFPY 269
           Y  E++E++G   ++ +   F   L     LM R+  TR WYL KF + +PK  KA+ P+
Sbjct: 197 YFGEIMEWFGWAVMTWSWVGFGFFLYTCANLMPRARATRLWYLEKFKDDYPKDRKAVIPF 256

Query: 270 IF 271
           I+
Sbjct: 257 IY 258




Involved in a reduction step in the biosynthesis of the plant steroid, brassinolide. Promotes cotton fibers (seed trichomes) initiation and elongation.
Gossypium hirsutum (taxid: 3635)
EC: 1EC: .EC: 3EC: .EC: 1EC: .EC: 2EC: 2
>sp|P31213|S5A2_HUMAN 3-oxo-5-alpha-steroid 4-dehydrogenase 2 OS=Homo sapiens GN=SRD5A2 PE=1 SV=1 Back     alignment and function description
>sp|Q28892|S5A2_MACFA 3-oxo-5-alpha-steroid 4-dehydrogenase 2 OS=Macaca fascicularis GN=SRD5A2 PE=1 SV=1 Back     alignment and function description
>sp|O18765|S5A2_PIG 3-oxo-5-alpha-steroid 4-dehydrogenase 2 OS=Sus scrofa GN=SRD5A2 PE=2 SV=2 Back     alignment and function description
>sp|P31214|S5A2_RAT 3-oxo-5-alpha-steroid 4-dehydrogenase 2 OS=Rattus norvegicus GN=Srd5a2 PE=1 SV=1 Back     alignment and function description
>sp|Q99N99|S5A2_MOUSE 3-oxo-5-alpha-steroid 4-dehydrogenase 2 OS=Mus musculus GN=Srd5a2 PE=2 SV=1 Back     alignment and function description
>sp|Q28891|S5A1_MACFA 3-oxo-5-alpha-steroid 4-dehydrogenase 1 OS=Macaca fascicularis GN=SRD5A1 PE=1 SV=1 Back     alignment and function description
>sp|Q68FF9|S5A1_MOUSE 3-oxo-5-alpha-steroid 4-dehydrogenase 1 OS=Mus musculus GN=Srd5a1 PE=2 SV=2 Back     alignment and function description
>sp|P24008|S5A1_RAT 3-oxo-5-alpha-steroid 4-dehydrogenase 1 OS=Rattus norvegicus GN=Srd5a1 PE=1 SV=2 Back     alignment and function description
>sp|P18405|S5A1_HUMAN 3-oxo-5-alpha-steroid 4-dehydrogenase 1 OS=Homo sapiens GN=SRD5A1 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query271
356499538266 PREDICTED: trans-2,3-enoyl-CoA reductase 0.952 0.969 0.595 2e-87
388518111268 unknown [Medicago truncatula] 0.974 0.985 0.560 8e-84
255637551266 unknown [Glycine max] 0.952 0.969 0.565 2e-82
225461846259 PREDICTED: trans-2,3-enoyl-CoA reductase 0.929 0.972 0.585 4e-80
357497777270 3-oxo-5-alpha-steroid 4-dehydrogenase [M 0.977 0.981 0.565 1e-78
15237245268 3-oxo-5-alpha-steroid 4-dehydrogenase fa 0.966 0.977 0.533 2e-78
449506368266 PREDICTED: steroid 5-alpha-reductase DET 0.966 0.984 0.567 3e-78
224113361268 predicted protein [Populus trichocarpa] 0.955 0.966 0.554 3e-77
449434536268 PREDICTED: LOW QUALITY PROTEIN: steroid 0.966 0.977 0.566 7e-77
449434534274 PREDICTED: steroid 5-alpha-reductase DET 0.974 0.963 0.529 4e-76
>gi|356499538|ref|XP_003518596.1| PREDICTED: trans-2,3-enoyl-CoA reductase-like [Glycine max] Back     alignment and taxonomy information
 Score =  327 bits (839), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 159/267 (59%), Positives = 200/267 (74%), Gaps = 9/267 (3%)

Query: 5   SIFFPPPVSLSLNIISVGMVVFAASLGYSEIKGKHMKYSKFWNFNSRSIKSAKKKEINIS 64
           S  FPPP SL ++ +SV  +V  A+ G+SEI+GKH+ YSKFWN N  +     +K++ +S
Sbjct: 9   SFIFPPPSSLVVSGMSVISLVSLANAGFSEIRGKHLNYSKFWNANPSA-----EKQVKLS 63

Query: 65  SKIGMLLFYTPSFFAGLASLWLCPFEGFRFRLLTSALTFHFFKRIFEVLFIHKYSGGMVL 124
           SK GMLL YTP+F AGLAS W+ P +G R  LL SA+T HFFKR+FEV+FIHKYSG M+L
Sbjct: 64  SKAGMLLLYTPAFLAGLASFWIFPHQGLRSTLLQSAVTLHFFKRVFEVVFIHKYSGAMLL 123

Query: 125 DSAIVVSLGYVITTTTMIYIQRLSQREELILDQPTIDLKFVGIILFCLGISGNFYHHYLL 184
           DSAI ++L Y ++T TMIY Q L+Q     L +P IDL + GI+LF +GI GNFYHHYLL
Sbjct: 124 DSAIPITLSYFLSTATMIYAQHLTQG----LPEPPIDLLYPGIVLFVVGIIGNFYHHYLL 179

Query: 185 SRMRRNGEKEYRIPTGGLFDKVVCPHYLFELIEFWGIFFISQTLYAFCNALGVTFYLMGR 244
           S +R  GEKEY+IP GG+F+ V+CPHYLFE+IEF+G  FISQTLYAF   +G T YL+GR
Sbjct: 180 SNLRGKGEKEYKIPKGGMFELVICPHYLFEIIEFYGFSFISQTLYAFSFTVGTTLYLLGR 239

Query: 245 SYITRTWYLCKFEHFPKHVKALFPYIF 271
           SY TR WYL KFE FPK VKA+ P++F
Sbjct: 240 SYSTRKWYLSKFEDFPKDVKAIIPFVF 266




Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388518111|gb|AFK47117.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|255637551|gb|ACU19102.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|225461846|ref|XP_002285664.1| PREDICTED: trans-2,3-enoyl-CoA reductase [Vitis vinifera] Back     alignment and taxonomy information
>gi|357497777|ref|XP_003619177.1| 3-oxo-5-alpha-steroid 4-dehydrogenase [Medicago truncatula] gi|355494192|gb|AES75395.1| 3-oxo-5-alpha-steroid 4-dehydrogenase [Medicago truncatula] Back     alignment and taxonomy information
>gi|15237245|ref|NP_197105.1| 3-oxo-5-alpha-steroid 4-dehydrogenase family protein [Arabidopsis thaliana] gi|14190513|gb|AAK55737.1|AF380656_1 AT5g16010/F1N13_150 [Arabidopsis thaliana] gi|9755647|emb|CAC01800.1| steroid 5alpha-reductase-like protein [Arabidopsis thaliana] gi|24797018|gb|AAN64521.1| At5g16010/F1N13_150 [Arabidopsis thaliana] gi|332004851|gb|AED92234.1| 3-oxo-5-alpha-steroid 4-dehydrogenase family protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|449506368|ref|XP_004162730.1| PREDICTED: steroid 5-alpha-reductase DET2-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|224113361|ref|XP_002316469.1| predicted protein [Populus trichocarpa] gi|222865509|gb|EEF02640.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449434536|ref|XP_004135052.1| PREDICTED: LOW QUALITY PROTEIN: steroid 5-alpha-reductase DET2-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449434534|ref|XP_004135051.1| PREDICTED: steroid 5-alpha-reductase DET2-like [Cucumis sativus] gi|449506334|ref|XP_004162719.1| PREDICTED: steroid 5-alpha-reductase DET2-like [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query271
TAIR|locus:2146112268 AT5G16010 "AT5G16010" [Arabido 0.966 0.977 0.533 9e-77
UNIPROTKB|Q2QDF6258 DET2 "Steroid 5-alpha-reductas 0.642 0.674 0.291 2e-15
UNIPROTKB|P31213254 SRD5A2 "3-oxo-5-alpha-steroid 0.778 0.830 0.285 2.6e-15
UNIPROTKB|F1PEK6255 SRD5A1 "Uncharacterized protei 0.678 0.721 0.290 6.9e-15
ZFIN|ZDB-GENE-050417-199252 srd5a2a "steroid-5-alpha-reduc 0.763 0.821 0.255 6.9e-15
MGI|MGI:2150380254 Srd5a2 "steroid 5 alpha-reduct 0.826 0.881 0.281 8.8e-15
UNIPROTKB|J9NXF5254 SRD5A2 "Uncharacterized protei 0.413 0.440 0.389 1.1e-14
MGI|MGI:98400255 Srd5a1 "steroid 5 alpha-reduct 0.634 0.674 0.303 2.8e-14
UNIPROTKB|F1NUW1257 SRD5A2 "Uncharacterized protei 0.405 0.428 0.380 3.1e-14
UNIPROTKB|E1BJY8254 SRD5A2 "Uncharacterized protei 0.409 0.437 0.392 3.3e-14
TAIR|locus:2146112 AT5G16010 "AT5G16010" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 773 (277.2 bits), Expect = 9.0e-77, P = 9.0e-77
 Identities = 143/268 (53%), Positives = 195/268 (72%)

Query:     5 SIFFPPPVSLSLNIISVGMVVFAASLGYSEIKGKHMKYSKFWNFNSRSIKSAKKKEINIS 64
             S  +PPP S+ LN +SV  V   A++G+SEI+G H+KYSKF   +S S +  K++  +IS
Sbjct:     6 SFVYPPPPSILLNCMSVVGVAALANIGWSEIRGNHLKYSKF-GVSSSSPQPQKERFGSIS 64

Query:    65 SKIGMLLFYTPSFFAGLASLWLCPFEGFRFRLLTSALTFHFFKRIFEVLFIHKYSGGMVL 124
             S+ GMLL YTP+F A  +S ++ P +  RF LL SAL  HFFKR+FEVLFIHKYSGGM +
Sbjct:    65 SRNGMLLLYTPAFLAAASSFFVVPSDDLRFLLLKSALALHFFKRVFEVLFIHKYSGGMAI 124

Query:   125 DSAIVVSLGYVITTTTMIYIQRLSQREELILDQPTIDLKFVGIILFCLGISGNFYHHYLL 184
             DSA+ +S  Y  +T  M+Y Q L+    L L +P+ D+K  G+++F +GI GN YHH LL
Sbjct:   125 DSALTISSSYFSSTALMLYSQNLT----LGLTEPSFDMKLAGVVMFVVGIVGNLYHHVLL 180

Query:   185 SRMRR-NGEKEYRIPTGGLFDKVVCPHYLFELIEFWGIFFISQTLYAFCNALGVTFYLMG 243
             +++R+ +G+KEY+IP GGLFD ++CPHYLFE++ FW  F ISQT+Y+F  A+G   YL+G
Sbjct:   181 AKLRKEDGKKEYKIPKGGLFDIIICPHYLFEILVFWSFFLISQTIYSFSFAMGTMLYLIG 240

Query:   244 RSYITRTWYLCKFEHFPKHVKALFPYIF 271
             RSY TRTWYL KF+ FPKH+KAL P++F
Sbjct:   241 RSYATRTWYLSKFDDFPKHIKALIPFVF 268




GO:0003865 "3-oxo-5-alpha-steroid 4-dehydrogenase activity" evidence=ISS
GO:0005737 "cytoplasm" evidence=IEA
GO:0006629 "lipid metabolic process" evidence=IEA
GO:0016021 "integral to membrane" evidence=IEA
GO:0016627 "oxidoreductase activity, acting on the CH-CH group of donors" evidence=IEA
GO:0009941 "chloroplast envelope" evidence=IDA
GO:0009507 "chloroplast" evidence=IDA
UNIPROTKB|Q2QDF6 DET2 "Steroid 5-alpha-reductase DET2" [Gossypium hirsutum (taxid:3635)] Back     alignment and assigned GO terms
UNIPROTKB|P31213 SRD5A2 "3-oxo-5-alpha-steroid 4-dehydrogenase 2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1PEK6 SRD5A1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-050417-199 srd5a2a "steroid-5-alpha-reductase, alpha polypeptide 2a" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
MGI|MGI:2150380 Srd5a2 "steroid 5 alpha-reductase 2" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|J9NXF5 SRD5A2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
MGI|MGI:98400 Srd5a1 "steroid 5 alpha-reductase 1" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|F1NUW1 SRD5A2 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|E1BJY8 SRD5A2 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
GSVIVG00027946001
SubName- Full=Chromosome chr19 scaffold_4, whole genome shotgun sequence; (259 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query271
pfam02544150 pfam02544, Steroid_dh, 3-oxo-5-alpha-steroid 4-deh 4e-21
PLN02560308 PLN02560, PLN02560, enoyl-CoA reductase 9e-12
PLN03164323 PLN03164, PLN03164, 3-oxo-5-alpha-steroid 4-dehydr 8e-11
PLN02392260 PLN02392, PLN02392, probable steroid reductase DET 3e-09
>gnl|CDD|217095 pfam02544, Steroid_dh, 3-oxo-5-alpha-steroid 4-dehydrogenase Back     alignment and domain information
 Score = 86.3 bits (214), Expect = 4e-21
 Identities = 42/113 (37%), Positives = 59/113 (52%)

Query: 159 TIDLKFVGIILFCLGISGNFYHHYLLSRMRRNGEKEYRIPTGGLFDKVVCPHYLFELIEF 218
           T     +GI LF  G+  N     +L  +R+ G   Y+IP GGLF+ V CP+Y  E++E+
Sbjct: 38  TDPRFLIGIGLFVTGMLINIKSDIILRTLRKPGNTGYKIPRGGLFELVSCPNYFGEIMEW 97

Query: 219 WGIFFISQTLYAFCNALGVTFYLMGRSYITRTWYLCKFEHFPKHVKALFPYIF 271
            G    + +L A   A      L  R+     WYL KFE +PK  KAL P++F
Sbjct: 98  IGYALATWSLPALAFAFFTVCNLTPRAKAHHKWYLKKFEKYPKSRKALIPFVF 150


This family consists of 3-oxo-5-alpha-steroid 4-dehydrogenases, EC:1.3.99.5 Also known as Steroid 5-alpha-reductase, the reaction catalyzed by this enzyme is: 3-oxo-5-alpha-steroid + acceptor <=> 3-oxo-delta(4)-steroid + reduced acceptor. The Steroid 5-alpha-reductase enzyme is responsible for the formation of dihydrotestosterone, this hormone promotes the differentiation of male external genitalia and the prostate during fetal development. In humans mutations in this enzyme can cause a form of male pseudohermaphorditism in which the external genitalia and prostate fail to develop normally. A related enzyme is also found in plants is DET2, a steroid reductase from Arabidopsis. Mutations in this enzyme cause defects in light-regulated development. Length = 150

>gnl|CDD|178174 PLN02560, PLN02560, enoyl-CoA reductase Back     alignment and domain information
>gnl|CDD|215610 PLN03164, PLN03164, 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal domain containing protein; Provisional Back     alignment and domain information
>gnl|CDD|178015 PLN02392, PLN02392, probable steroid reductase DET2 Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 271
KOG1638257 consensus Steroid reductase [Lipid transport and m 100.0
PLN02392260 probable steroid reductase DET2 100.0
PLN02560308 enoyl-CoA reductase 100.0
PLN03164323 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal 100.0
KOG1639297 consensus Steroid reductase required for elongatio 100.0
PF02544150 Steroid_dh: 3-oxo-5-alpha-steroid 4-dehydrogenase 100.0
KOG1640304 consensus Predicted steroid reductase [Lipid trans 100.0
PF06966235 DUF1295: Protein of unknown function (DUF1295); In 99.68
COG3752272 Steroid 5-alpha reductase family enzyme [General f 99.61
KOG4650311 consensus Predicted steroid reductase [General fun 99.04
PF01222432 ERG4_ERG24: Ergosterol biosynthesis ERG4/ERG24 fam 98.86
PF04191106 PEMT: Phospholipid methyltransferase ; InterPro: I 98.73
COG2020187 STE14 Putative protein-S-isoprenylcysteine methylt 98.44
KOG1435428 consensus Sterol reductase/lamin B receptor [Lipid 98.37
PF0414094 ICMT: Isoprenylcysteine carboxyl methyltransferase 97.75
KOG2628201 consensus Farnesyl cysteine-carboxyl methyltransfe 97.25
COG1755172 Uncharacterized protein conserved in bacteria [Fun 96.47
>KOG1638 consensus Steroid reductase [Lipid transport and metabolism] Back     alignment and domain information
Probab=100.00  E-value=2.4e-66  Score=453.53  Aligned_cols=249  Identities=28%  Similarity=0.397  Sum_probs=207.5

Q ss_pred             ccCCChhhHHHHHHHHHHHHHHHHHHHhhhccccCCCCccccCccccccccCCccccccchhhHHhhhhHHHHHHHHHhh
Q 041039            7 FFPPPVSLSLNIISVGMVVFAASLGYSEIKGKHMKYSKFWNFNSRSIKSAKKKEINISSKIGMLLFYTPSFFAGLASLWL   86 (271)
Q Consensus         7 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ygk~~~~~~~~~~~~~~~~~~i~~r~~w~~~e~p~~~~~~~~~~~   86 (271)
                      ..|+.+...+..++++....++..++.+.++  ++|||+  +++-.  +   .+..+|+|.+|++||.|+++++++.+..
T Consensus         3 ~~~~~~~il~~~~~~~~~~~~~~~~l~~~~k--s~yGr~--s~s~~--~---~~~~ip~~~aw~iqe~Paf~~pl~~~~~   73 (257)
T KOG1638|consen    3 VYPLREIILAGSWTLIGAGALAFLALKRQRK--SGYGRH--SSSLN--P---TKTRIPPRIAWFIQELPAFAIPLYSLFR   73 (257)
T ss_pred             cccchHHHHHHHHHHHHHHHHHHHHHhhccc--cCCcee--cCCCc--c---hhcCCCchhHHHHhcCcHHHhhHHHhcC
Confidence            4566666666677777766666665555553  999999  44322  1   2234999999999999999999998888


Q ss_pred             CCCCc-hhHHHHHHHHHHHHHHHHHhhhheecccCCcchhhHHHHHHHHHHHHHHHHhhhc-----ccchhhhccCCchh
Q 041039           87 CPFEG-FRFRLLTSALTFHFFKRIFEVLFIHKYSGGMVLDSAIVVSLGYVITTTTMIYIQR-----LSQREELILDQPTI  160 (271)
Q Consensus        87 ~p~~~-~~~~ll~~l~~lHy~~R~~e~~fv~~~s~~m~~~~~~~~~~~y~~~~~~~~~~~~-----~~~~~~~~~~~p~~  160 (271)
                      .|+++ .+..+|.+++++||++|++|++|+++.+++||+....    ..+.+|.++++.|+     .+.+++.|.+++  
T Consensus        74 ~~~~~~~~~~~L~~~flvHYf~R~liypf~~~~~~~~p~~i~a----~a~~F~~~NG~lqg~y~~~~~~~~d~~~~~~--  147 (257)
T KOG1638|consen   74 GPSSDLPPGLLLLSAFLVHYFHRALIYPFLIRSSNPSPAIIVA----LAIAFCTLNGTLQGLYLSHYQLYEDPWVTDI--  147 (257)
T ss_pred             CCcccccccHHHHHHHHHHHHHHHHhheeeecCCCCccHHHHH----HHHHHHHhhHHHHHHHHHhcccccCCCchhH--
Confidence            77654 5778999999999999999999999988888865544    44445666655553     333333344333  


Q ss_pred             hHHHHHHHHHHHHHHhHHHHHHHHHhcccCCCccccccccCcccccccccchhHHHHHHHHHHHhhhHHHHHHHHHHHHH
Q 041039          161 DLKFVGIILFCLGISGNFYHHYLLSRMRRNGEKEYRIPTGGLFDKVVCPHYLFELIEFWGIFFISQTLYAFCNALGVTFY  240 (271)
Q Consensus       161 ~~~~~g~~lf~~g~~~n~~~~~~L~~LR~~~~~~y~iP~gglF~~Vs~PnY~~Eil~w~g~al~~~~~~~~~~~~~~~~~  240 (271)
                       +..+|+.+|+.||++|++||.+|++|||+++++||||+||||||||||||||||+||+|+|+++|+++++.|++++++|
T Consensus       148 -r~liG~~lfv~Gm~iN~~sD~iL~~LRk~~~~~YkIP~GglFeyVsCPNYfgEiieW~Gyal~~ws~p~~aFa~ft~~~  226 (257)
T KOG1638|consen  148 -RFLIGVVLFVTGMLINIYSDNILRTLRKPGGKGYKIPRGGLFEYVSCPNYFGEIIEWIGYALASWSLPALAFAFFTICN  226 (257)
T ss_pred             -HHHHHHHHHHHHhhhhhhhHHHHHHhhcCCCCceecCCCceEEEeecchHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence             5789999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhcccCCCCcceeccccC
Q 041039          241 LMGRSYITRTWYLCKFEHFPKHVKALFPYIF  271 (271)
Q Consensus       241 l~~rA~~~h~wY~~kF~~Yp~~RkalIPfI~  271 (271)
                      +++||.++|+||+||||||||+|||+||||+
T Consensus       227 l~pRA~ahH~WY~~kFe~YPk~RkAlIPfvf  257 (257)
T KOG1638|consen  227 LGPRAYAHHKWYLKKFEDYPKNRKALIPFVF  257 (257)
T ss_pred             hhHHHHHHHHHHHHhhccCCccceeeccccC
Confidence            9999999999999999999999999999986



>PLN02392 probable steroid reductase DET2 Back     alignment and domain information
>PLN02560 enoyl-CoA reductase Back     alignment and domain information
>PLN03164 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal domain containing protein; Provisional Back     alignment and domain information
>KOG1639 consensus Steroid reductase required for elongation of the very long chain fatty acids [Lipid transport and metabolism] Back     alignment and domain information
>PF02544 Steroid_dh: 3-oxo-5-alpha-steroid 4-dehydrogenase ; InterPro: IPR001104 Synonym(s): Steroid 5-alpha-reductase 3-oxo-5-alpha-steroid 4-dehydrogenases, 1 Back     alignment and domain information
>KOG1640 consensus Predicted steroid reductase [Lipid transport and metabolism] Back     alignment and domain information
>PF06966 DUF1295: Protein of unknown function (DUF1295); InterPro: IPR010721 This family contains a number of bacterial and eukaryotic proteins of unknown function that are approximately 300 residues long Back     alignment and domain information
>COG3752 Steroid 5-alpha reductase family enzyme [General function prediction only] Back     alignment and domain information
>KOG4650 consensus Predicted steroid reductase [General function prediction only] Back     alignment and domain information
>PF01222 ERG4_ERG24: Ergosterol biosynthesis ERG4/ERG24 family; InterPro: IPR001171 The two fungal enzymes, C-14 sterol reductase (gene ERG24 in budding yeast and erg3 in Neurospora crassa) and C-24(28) sterol reductase (gene ERG4 in budding yeast and sts1 in fission yeast), are involved in ergosterol biosynthesis Back     alignment and domain information
>PF04191 PEMT: Phospholipid methyltransferase ; InterPro: IPR007318 The Saccharomyces cerevisiae (Baker's yeast) phospholipid methyltransferase (2 Back     alignment and domain information
>COG2020 STE14 Putative protein-S-isoprenylcysteine methyltransferase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG1435 consensus Sterol reductase/lamin B receptor [Lipid transport and metabolism; Signal transduction mechanisms] Back     alignment and domain information
>PF04140 ICMT: Isoprenylcysteine carboxyl methyltransferase (ICMT) family ; InterPro: IPR007269 The isoprenylcysteine o-methyltransferase (2 Back     alignment and domain information
>KOG2628 consensus Farnesyl cysteine-carboxyl methyltransferase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG1755 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query271
4a2n_B194 Isoprenylcysteine carboxyl methyltransferase; memb 99.47
>4a2n_B Isoprenylcysteine carboxyl methyltransferase; membrane protein, RAS and RHO gtpases signallin; HET: SAH PLM CDL; 3.40A {Methanosarcina acetivorans} Back     alignment and structure
Probab=99.47  E-value=1.3e-12  Score=112.76  Aligned_cols=110  Identities=13%  Similarity=0.125  Sum_probs=85.0

Q ss_pred             hHHHHHHHHHHHHHHhHHHHHHHHHh-ccc--CCCccccccccCcccccccccchhHHHHHHHHHHHhhhHHHHHH--HH
Q 041039          161 DLKFVGIILFCLGISGNFYHHYLLSR-MRR--NGEKEYRIPTGGLFDKVVCPHYLFELIEFWGIFFISQTLYAFCN--AL  235 (271)
Q Consensus       161 ~~~~~g~~lf~~g~~~n~~~~~~L~~-LR~--~~~~~y~iP~gglF~~Vs~PnY~~Eil~w~g~al~~~~~~~~~~--~~  235 (271)
                      ...++|+++++.|......+|.+|.+ ++.  +.+++.++.+.|+|++++||||+||+++|+|++++++++.+++.  ..
T Consensus        76 ~~~~~G~~l~l~G~~l~~~a~~~Lg~~f~~~~~~~~~~~Lvt~G~y~~vRHP~Y~G~~l~~~g~~l~~~s~~~~~~~~~~  155 (194)
T 4a2n_B           76 SIRLFALIVTFLNIGLFTKIHKDLGNNWSAILEIKDGHKLVKEGIYKNIRHPMYAHLWLWVITQGIILSNWVVLIFGIVA  155 (194)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHGGGCCSSCCEETTCCCCCSSTTTTBSSHHHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCCCCCCeeeecCcchhccCccHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence            45789999999999999999999954 443  23567889999999999999999999999999999988766542  22


Q ss_pred             HHHHHHHHHHHHHHHHHHHhc----ccCCCCcceeccccC
Q 041039          236 GVTFYLMGRSYITRTWYLCKF----EHFPKHVKALFPYIF  271 (271)
Q Consensus       236 ~~~~~l~~rA~~~h~wY~~kF----~~Yp~~RkalIPfI~  271 (271)
                      ++.. +..|+...+++.+++|    +||.++.+++||+|.
T Consensus       156 ~~~~-~~~ri~~EE~~L~~~fG~~Y~~Y~~rv~r~iP~i~  194 (194)
T 4a2n_B          156 WAIL-YFIRVPKEEELLIEEFGDEYIEYMGKTGRLFPKVV  194 (194)
T ss_dssp             HHHH-HHHHHHHHHHHHHHHHTHHHHHHHHHCBSSSCC--
T ss_pred             HHHH-HHHHHHHHHHHHHHHhCHHHHHHHHhCCeeCceeC
Confidence            3333 3456666666677766    467778889999974




Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00