Citrus Sinensis ID: 041057

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180
Protein Sequence
RRPHVVNGGGFVVTDCSQKIIFRVDGCGVLGTKGELVVRHADGDAVVLIRRKGGVVEALSIHKKWKGYAFDYEGSKKLVFTLKEPPSSSCLVRNSSIRISTETTARSSNFEVKGYFPDRDCIIVDPSGNIVAQIGVKKEIQDLMESKDLYHIVVKPGIDQAFVVGVIATLDYIYGESTRC
Secondary Structure (PSIPRED)
cccEEEEcccEEEEcccccEEEEEEccccccccccEEEEcccccEEEEEEEcccEEEEEccccEEEEEEEccccccEEEEEEEcccccccEEEccEEEEEEcccccccEEEEEEEccccEEEEEcccccEEEEEEEEEEEcEEEEEccEEEEEEEccccHHHHHHHHHHHHHHccccccc
Secondary Structure Prediction (SSPRO)
ccEEEEEcccEEEEEccccEEEEEccccccccccEEEEEcccccEEEEEEEcccccEEEEccccEEEEEcccccccccEEEEEEcccEEEcccEEEEEEEcccccccccEEEEEccccccEEEEcccccEEEEEEEEEcccEEEEcccEEEEEEcccccHHHHHHHHHHHHHHccccccc
Coil and Loop (DISEMBL)
rrphvvngggfvvtdcsQKIIFrvdgcgvlgtkgelvvrhaDGDAVVLIRRKGGVVEALSIHKKWKGYAFDYEGSKKLVftlkeppsssclvrnssiristettarssnfevkgyfpdrdciivdpsgnivaqIGVKKEIQDLMESKDLYHIVVKPGIDQAFVVGVIATLDYiygestrc
Flexible Loop (DISEMBL)
rrphvvngggfvvtdcsqkIIFRVDGCGVLGTKGELVVRHADGDAVVLIRRKGGVVEALSIHKKWKGYAFDYEGSKKLVFTlkeppsssclvrnssiristettarssnfevkgyfpDRDCIIVDPSGNIVAQIGVKKEIQDLMESKDLYHIVVKPGIDQAFVVGVIATLDYIYGESTRC
Low Complexity Region (SEG)
RRPHVVNGGGFVVTDCSQKIIFRVDGCGVLGTKGELVVRHADGDAVVLIRRKGGVVEALSIHKKWKGYAFDYEGSKKLVFTLKEPPSSSCLVRNSSIRISTETTARSSNFEVKGYFPDRDCIIVDPSGNIVAQIGVKKEIQDLMESKDLYHIVVKPGIDQAFVVGVIATLDYIYGESTRC
Disordered region (IsUnstruct)
****VVNGGGFVVTDCSQKIIFRVDGCGVLGTKGELVVRHADGDAVVLIRRKGGVVEALSIHKKWKGYAFDYEGSKKLVFTLK******CLV****************NFEVKGYFPDRDCIIVDPSGNIVAQIGVKKEIQDLMESKDLYHIVVKPGIDQAFVVGVIATLDYIYG*****
Disordered Region (DISOPRED)
*RPHVVNGGGFVVTDCSQKIIFRVDGCGVLGTKGELVVRHADGDAVVLIRRKGGVVEALSIHKKWKGYAFDYEGSKKLVFTLKEPPS**CLVRNSSIRISTETTARSSNFEVKGYFPDRDCIIVDPSGNIVAQIGVKKEIQDLMESKDLYHIVVKPGIDQAFVVGVIATLDYIYG*****
Disordered Region (DISEMBL)
RRPHVVNGGGFVVTDCSQKIIFRVDGCGVLGTKGELVVRHADGDAVVLIRRKGGVVEALSIHKKWKGYAFDYEGSKKLVFTLKEPPSSSCLVRNSSIRISTETTARSSNFEVKGYFPDRDCIIVDPSGNIVAQIGVKKEIQDLMESKDLYHIVVKPGIDQAFVVGVIATLDYIYGESTRC
Disordered Region (DISPRO)
*RPHVVNGGGFVVTDCSQKIIFRVDGCGVLGTKGELVVRHADGDAVVLIRRKGGVVEALSIHKKWKGYAFDYEGSKKLVFTLKEPPSSSCLVRNSSIRISTETTARSSNFEVKGYFPDRDCIIVDPSGNIVAQIGVKKEIQDLMESKDLYHIVVKPGIDQAFVVGVIATLDYIYGE****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
RRPHVVNGGGFVVTDCSQKIIFRVDGCGVLGTKGELVVRHADGDAVVLIRRKGGVVEALSIHKKWKGYAFDYEGSKKLVFTLKEPPSSSCLVRNSSIRISTETTARSSNFEVKGYFPDRDCIIVDPSGNIVAQIGVKKEIQDLMESKDLYHIVVKPGIDQAFVVGVIATLDYIYGESTRC
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	180	2.2.26 [Sep-21-2011]
Q9ZUF7	191	Protein LURP-one-related	yes	no	0.95	0.895	0.616	1e-58
A0MFH4	215	Protein LURP-one-related	no	no	0.994	0.832	0.515	1e-53
Q9LVZ8	220	Protein LURP-one-related	no	no	0.866	0.709	0.303	4e-13
Q9SSC7	210	Protein LURP-one-related	no	no	0.872	0.747	0.312	2e-12
Q9LZX1	217	Protein LURP-one-related	no	no	0.938	0.778	0.265	7e-11
Q9SF24	194	Protein LURP-one-related	no	no	0.961	0.891	0.266	5e-10
Q9ZQR8	207	Protein LURP1 OS=Arabidop	no	no	0.905	0.787	0.222	1e-06
B3H5L1	197	Protein LURP-one-related	no	no	0.905	0.827	0.251	1e-05
A0MFL4	221	Protein LURP-one-related	no	no	0.938	0.764	0.232	5e-05
Q9LQ36	224	Protein LURP-one-related	no	no	0.855	0.687	0.222	9e-05

>sp|Q9ZUF7|LOR6_ARATH Protein LURP-one-related 6 OS=Arabidopsis thaliana GN=At2g05910 PE=2 SV=1

 Score =  225 bits (573), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 111/180 (61%), Positives = 140/180 (77%), Gaps = 9/180 (5%)

Query: 1   RRPHVVNGGGFVVTDCSQKIIFRVDGCGVLGTKGELVVRHADGDAVVLIRRKGGVVEALS 60
           RRPHVVNGGGFVVTD  +KI+F++DGCGVLGTKGELV+R +DG+ ++LI +KGGVV+ALS
Sbjct: 21  RRPHVVNGGGFVVTDYKEKIVFKIDGCGVLGTKGELVLRDSDGNDLLLIHKKGGVVQALS 80

Query: 61  IHKKWKGYAFDYEGSKKLVFTLKEPPSSSCLVRNSSIRISTETTARSSNFEVKGYFPDRD 120
           IH KWKGY++DY+GS K VFTL++ P  SC    SSIRIS      +  F+VKGYFPDRD
Sbjct: 81  IHNKWKGYSYDYQGSPKPVFTLRD-PKHSCFSITSSIRIS--VGPGNCYFDVKGYFPDRD 137

Query: 121 CIIVDPSGNIVAQIGVKKEIQDLMESKDLYHIVVKPGIDQAFVVGVIATLDYIYGESTRC 180
           C IVD  GN++AQ      +++ + S+D+Y +V KP +D+AFV GVIA LDYIYGEST C
Sbjct: 138 CSIVDSKGNVIAQ------VKEWIGSRDIYKVVTKPSVDKAFVFGVIAVLDYIYGESTSC 191

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.
Arabidopsis thaliana (taxid: 3702)

>sp|A0MFH4|LOR16_ARATH Protein LURP-one-related 16 OS=Arabidopsis thaliana GN=At5g20640 PE=2 SV=2

 Score =  208 bits (530), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 97/188 (51%), Positives = 147/188 (78%), Gaps = 9/188 (4%)

Query: 1   RRPHVVNGGGFVVTDCSQKIIFRVDGCGVLGTKGELVVRHADGDAVVLIRRKGGVVEALS 60
           RRP +VNGGGFVV++  Q ++FRVDGCGVLGTKG+L++R+ DG+ ++LIR+ GG+V+AL+
Sbjct: 29  RRPPMVNGGGFVVSNSKQVVVFRVDGCGVLGTKGKLLLRNGDGNDLLLIRKMGGIVQALN 88

Query: 61  -IHKKWKGYAFDYEGSKKLVFTLKEPPSSSCLVRNSSIRISTE------TTARSSNFEVK 113
            +H KW+G+ +D EG+++LVFTLK+ P  SCLV+NSSI+I         ++ R++  E+K
Sbjct: 89  MVHNKWEGFGYDNEGTERLVFTLKD-PKDSCLVQNSSIKILVHGKPPKISSTRNNYVEIK 147

Query: 114 GYFPDRDCIIVDPSGNIVAQIGVKKEIQDLM-ESKDLYHIVVKPGIDQAFVVGVIATLDY 172
           G F +R C I+D  G  +A++ ++KE+++++   KDLYH++VKP +DQ+F+VG+IA LDY
Sbjct: 148 GSFAERACNIMDSDGKAIAKVRIEKEMEEMVGNKKDLYHVIVKPNVDQSFIVGLIAILDY 207

Query: 173 IYGESTRC 180
           I+GEST C
Sbjct: 208 IHGESTIC 215

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LVZ8|LOR12_ARATH Protein LURP-one-related 12 OS=Arabidopsis thaliana GN=At3g15810 PE=2 SV=1

 Score = 74.3 bits (181), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 54/178 (30%), Positives = 86/178 (48%), Gaps = 22/178 (12%)

Query: 7   NGGGFVVTDCSQKIIFRVDGCGV-LGTKGELVVRHADGDAVVLIRRKGGVVEALSIHKKW 65
            G GF   DC   IIFRVD  G       E+V+  A G  ++ ++RK       ++H++W
Sbjct: 43  TGDGFAAYDCRGDIIFRVDSYGPDTRDNDEIVLMDATGKCLLTVKRK-----RPTLHQRW 97

Query: 66  KGYAFDYEGSKKLVFTLKEPPSSSCLVRNSSI--RISTETTARSSNFE---VKGYFPDRD 120
           +G+  +    +K +F+          VR SSI  R + E        E   + G F  R 
Sbjct: 98  EGFLGERSEGQKPIFS----------VRRSSIIGRCTMEVEVYDGTGEEYIIDGDFSQRS 147

Query: 121 CIIVDPSGNIVAQIGVKKEIQ-DLMESKDLYHIVVKPGIDQAFVVGVIATLDYIYGES 177
           C+I D     VA+I  K +   ++M  +D++ + +KPG D AF +G++  LD I G+ 
Sbjct: 148 CLIYDTKKCTVAEIKRKVDASTNVMLGRDVFTLEIKPGFDGAFAMGLVVVLDQINGDD 205

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SSC7|LOR5_ARATH Protein LURP-one-related 5 OS=Arabidopsis thaliana GN=At1g80120 PE=1 SV=1

 Score = 72.0 bits (175), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 55/176 (31%), Positives = 89/176 (50%), Gaps = 19/176 (10%)

Query: 8   GGGFVVTDCSQKIIFRVDGCGVLGTKGELVVRHADGDAVVLIRRKGGVVEALSIHKK--- 64
           G GF V DC   ++FRVD  G   T+        D D VVL+   G  +  L   +    
Sbjct: 30  GDGFTVYDCKGSLVFRVDSYGGPNTR--------DTDEVVLMDAHGRCLLTLRRKRPSLR 81

Query: 65  --WKGYAFDYEGSKKLVFTLKEPPSSSCLVRNSSIRISTETTARSSNFEVKGYFPDRDCI 122
             W+GY  +    +K +F ++    SS + RNS + +      + S + ++G F  R+C 
Sbjct: 82  RRWEGYLGERSDGQKPIFGVRR---SSIIGRNS-VTVEVYGDYQCSEYLIEGSFGARNCT 137

Query: 123 IVDP-SGNIVAQIGVKKEIQ-DLMESKDLYHIVVKPGIDQAFVVGVIATLDYIYGE 176
           +V+  +   VA+I  K +   ++M  KD++ + VKPG D AF +G++  LD IYG+
Sbjct: 138 VVEAETRRKVAEIRRKVDASTNVMLGKDVFSLNVKPGFDGAFAMGLVLVLDQIYGD 193

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LZX1|LOR15_ARATH Protein LURP-one-related 15 OS=Arabidopsis thaliana GN=At5g01750 PE=1 SV=1

 Score = 67.0 bits (162), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 84/177 (47%), Gaps = 8/177 (4%)

Query: 1   RRPHVVNGGGFVVTDCSQKIIFRVDGCGVLGTKGELVVRHADGDAVVLIRRKGGVVEALS 60
           R+   +  G FV+TD +  ++F+V    V G   + V+    G  VV +R K      +S
Sbjct: 44  RKMMSLTDGNFVITDVNGNLLFKVKE-PVFGLHDKRVLLDGSGTPVVTLREK-----MVS 97

Query: 61  IHKKWKGYAFDYEGSKKLVFTLKEPPSSSCLVRNSSIRISTETTARSSNFEVKGYFPDRD 120
           +H +W+ +       + L++T+K   S   L     + +      +  +F VKG + +R 
Sbjct: 98  MHDRWQVFRGGSTDQRDLLYTVKRS-SMLQLKTKLDVFLGHNKDEKRCDFRVKGSWLERS 156

Query: 121 CII-VDPSGNIVAQIGVKKEIQDLMESKDLYHIVVKPGIDQAFVVGVIATLDYIYGE 176
           C++    S  IVAQ+  K  +Q +   KD + + V P +D AF+  ++  LD +  E
Sbjct: 157 CVVYAGESDAIVAQMHRKHTVQSVFLGKDNFSVTVYPNVDYAFIASLVVILDDVNRE 213

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SF24|LOR10_ARATH Protein LURP-one-related 10 OS=Arabidopsis thaliana GN=At3g11740 PE=2 SV=2

 Score = 63.9 bits (154), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 81/180 (45%), Gaps = 7/180 (3%)

Query: 1   RRPHVVNGGGFVVTDCSQKIIFRVDGCGVLGTKGELVVRHADGDAVVLIRRKGGVVEALS 60
           R+   +  G F VTD +  ++F+V    +     + ++  A  D  +L  R+  V    S
Sbjct: 20  RKVMTLTDGNFAVTDVNGNLLFKVKE-PLFSISDKRILLDA-YDTPILTLRENKV----S 73

Query: 61  IHKKWKGYAFDYEGSKKLVFTLKEPPSSSCLVRNSSIRISTETTARSSNFEVKGYFPDRD 120
           +H +W  Y         L++TLK       +     I ++     +  +F VKG + DR 
Sbjct: 74  LHDRWLVYRGKSTDQSDLLYTLKRSSMIQIMKPKLDIFLAHNKEMKICDFHVKGSWIDRS 133

Query: 121 CII-VDPSGNIVAQIGVKKEIQDLMESKDLYHIVVKPGIDQAFVVGVIATLDYIYGESTR 179
           C++    S  IVAQ+  K   Q ++  K  + + V P +D AF+V +I  LD I  E + 
Sbjct: 134 CVVYAGKSDAIVAQMHKKHTAQSILIGKSNFSVTVYPNVDFAFIVSLIVILDDINREDSE 193

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9ZQR8|LURP1_ARATH Protein LURP1 OS=Arabidopsis thaliana GN=LURP1 PE=2 SV=1

 Score = 52.8 bits (125), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/171 (22%), Positives = 78/171 (45%), Gaps = 8/171 (4%)

Query: 1   RRPHVVNGGGFVVTDCSQKIIFRVDGCGVLGTKGELVVRHADGDAVVLIRRKGGVVEALS 60
           R+   +  G FV+T    K++F+V    +    G+ ++    G  V+ +R K      ++
Sbjct: 24  RKVMKITDGNFVITSADGKLLFKVKD-PLFSLHGKRILLDCSGAKVLTLRGK-----MMT 77

Query: 61  IHKKWKGYAFDYEGSKKLVFTLKEPPSSSCLVRNSSIRISTETTARSSNFEVKGYFPDRD 120
           +H +W+ +         L++T+K   S   L     + ++     +  +F+VKG + D  
Sbjct: 78  MHDRWQVFRGGSTEEGALLYTVKRS-SMIQLAPKLEVFLANNVEEKICDFKVKGAWLDDS 136

Query: 121 CII-VDPSGNIVAQIGVKKEIQDLMESKDLYHIVVKPGIDQAFVVGVIATL 170
           C++    S  I+A +  K+ ++     KD + + V   +D AF+  +I  L
Sbjct: 137 CVVYAGDSDTIIAHMCGKQTMRGFFFGKDHFSVTVDKNVDYAFIASLIVIL 187

Involved in basal defense against virulent oomycetes. Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

Arabidopsis thaliana (taxid: 3702)

>sp|B3H5L1|LOR9_ARATH Protein LURP-one-related 9 OS=Arabidopsis thaliana GN=At3g10986 PE=3 SV=1

 Score = 49.3 bits (116), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 83/179 (46%), Gaps = 16/179 (8%)

Query: 1   RRPHVVNGGGFVVTDCSQKIIFRVDGCGVLGTKGELVVRHADGDAVVLIRRKGGVVEALS 60
           RR   +    + V D S  +IF VDG G+   + + V+R A G  ++ +R KG V     
Sbjct: 21  RRRESLKRERYDVFDLSNNLIFTVDG-GIWNIRRKRVLRDAAGIPLLSMRTKGLV----P 75

Query: 61  IHKKWKGYAFDYEGSKKLVFTLKEPPSSSCLVRNSSIRI-------STETTARSSNFEVK 113
           +   W+ Y  D   S  L+F+ +EP   + L   +S+ +       ST+ ++   +F+  
Sbjct: 76  MRYNWEVYKGDSTESDNLLFSAREP---NLLSFKTSLDVTLPPDQSSTDISSVEPDFQTF 132

Query: 114 GYFPDRDCIIVDPSGN-IVAQIGVKKEIQDLMESKDLYHIVVKPGIDQAFVVGVIATLD 171
           G +      + +P  N ++A++        L++    + + V P +D AFVV ++   D
Sbjct: 133 GRYIGSSFKLFEPIHNTLLAEVVHDFTWGGLIKGSYSFKVRVNPYVDFAFVVALLVITD 191

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

Arabidopsis thaliana (taxid: 3702)

>sp|A0MFL4|LOR17_ARATH Protein LURP-one-related 17 OS=Arabidopsis thaliana GN=At5g41590 PE=2 SV=2

 Score = 47.4 bits (111), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 43/185 (23%), Positives = 91/185 (49%), Gaps = 16/185 (8%)

Query: 1   RRPHVVNGGGFVVTDCSQKIIFRVDGCGVLGTKGELVVRHADGDAVVLIRRKGGVVEALS 60
           R+  +V+  GF V D +  +I+RVD       + EL++   DG++++L+ R     + ++
Sbjct: 43  RKSLLVSCEGFTVIDSNGDLIYRVDNYARTRPE-ELILMDKDGNSLLLMHR----TKKIT 97

Query: 61  IHKKWKGY-AFDYEGSKKL----VFTLKEPPSSSCLVRNSSI--RISTETTARSSNFEVK 113
           +   W  Y A D +G  K+     + +++    + L   S I   + + +  + +++ +K
Sbjct: 98  LVDSWGIYEANDTKGETKIPKCPTWYMRKNLKMNILSTKSDILAYVYSGSFDKKNSYIIK 157

Query: 114 GYFPDRDCIIVD-PSGNIVAQIGVKKEIQD--LMESKDLYHIVVKPGIDQAFVVGVIATL 170
           G +  + C IV  P    V +I  +KE++   +    D++ +VV PG D    + ++  L
Sbjct: 158 GSYRCKSCKIVHVPLNKTVVEIK-RKEVRTKGVRFGSDVFDLVVNPGFDTGLAMALVLLL 216

Query: 171 DYIYG 175
           D ++ 
Sbjct: 217 DQMFS 221

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LQ36|LOR1_ARATH Protein LURP-one-related 1 OS=Arabidopsis thaliana GN=At1g33840 PE=2 SV=2

 Score = 46.6 bits (109), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 40/180 (22%), Positives = 84/180 (46%), Gaps = 26/180 (14%)

Query: 1   RRPHVVNGGGFVVTDCSQKIIFRV-DGCGVLGTKGELVVRHADGDAVVLIRRKGGVVEAL 59
           R+   +  G FV+T+    ++F+V D    L  K  L+    DG    ++  KG +   +
Sbjct: 44  RKVLKITDGNFVITNAEGNLLFKVKDPFFSLHEKRILM----DGFGTKVLTLKGKI---M 96

Query: 60  SIHKKWKGYAFDYEGSKKLVFTLKEPPSSSCLVRNSSIRISTET--------TARSSNFE 111
           ++H +W  +         L++T+K         R++ ++I+T+           +  ++ 
Sbjct: 97  TMHDRWLVFRGGSTEEVDLLYTVK---------RSNMVQITTKLDVFLADNIEQKKCDYR 147

Query: 112 VKGYFPDRDCIIVDPSGNIV-AQIGVKKEIQDLMESKDLYHIVVKPGIDQAFVVGVIATL 170
           ++G + +  C +     +I+ AQ+  KK +Q ++  KD + + V P +D AF+  +I  L
Sbjct: 148 LEGVWLETSCFVYAGDSDIILAQMREKKTMQSVLFGKDNFCLTVNPNVDYAFIASLIVIL 207

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	180
255550427	208	conserved hypothetical protein [Ricinus	0.988	0.855	0.701	4e-71
224068474	210	predicted protein [Populus trichocarpa]	0.994	0.852	0.697	1e-70
356532780	203	PREDICTED: protein LURP-one-related 6-li	0.994	0.881	0.684	3e-68
357450041	206	hypothetical protein MTR_2g042230 [Medic	0.994	0.868	0.663	4e-67
356556394	211	PREDICTED: protein LURP-one-related 6-li	0.994	0.848	0.663	4e-67
225444710	208	PREDICTED: protein LURP-one-related 6 [V	0.961	0.831	0.713	4e-67
351723407	204	uncharacterized protein LOC100306504 [Gl	0.966	0.852	0.664	6e-64
373938247	209	hypothetical protein [Diospyros kaki]	0.994	0.856	0.633	3e-62
15225013	191	LURP-one-related 6 protein [Arabidopsis	0.95	0.895	0.616	7e-57
297835842	191	predicted protein [Arabidopsis lyrata su	0.95	0.895	0.594	2e-56

>gi|255550427|ref|XP_002516264.1| conserved hypothetical protein [Ricinus communis] gi|223544750|gb|EEF46266.1| conserved hypothetical protein [Ricinus communis]

 Score =  272 bits (696), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 127/181 (70%), Positives = 159/181 (87%), Gaps = 3/181 (1%)

Query: 2   RPHVVNGGGFVVTDCSQKIIFRVDGCGVLGTKGELVVRHADGDAVVLIRRKGGVVEALSI 61
           RP+VVNGGGFVVTDCSQK++FRVDGCGVLG +GEL+VR +DG+ ++L+RRKGG+V+ALSI
Sbjct: 29  RPNVVNGGGFVVTDCSQKVVFRVDGCGVLGKQGELIVRDSDGEPLLLVRRKGGMVQALSI 88

Query: 62  HKKWKGYAFDYEGSKKLVFTLKEPPSSSCLVRNSSIRISTET--TARSSNFEVKGYFPDR 119
           H+KWKG+ FDYEGS+KLVF+LKE P  SCL+RN++IR+STE   + +  +FE++G FPDR
Sbjct: 89  HRKWKGFTFDYEGSQKLVFSLKE-PKDSCLLRNNAIRVSTEPRRSNKDWDFEIRGCFPDR 147

Query: 120 DCIIVDPSGNIVAQIGVKKEIQDLMESKDLYHIVVKPGIDQAFVVGVIATLDYIYGESTR 179
           DC IVD  GNI+AQIGVKKE+ ++M SKDLYH+VVK GIDQAFV G+I+ LDYIYGESTR
Sbjct: 148 DCRIVDYFGNIIAQIGVKKEVNEVMRSKDLYHVVVKSGIDQAFVFGIISVLDYIYGESTR 207

Query: 180 C 180
           C
Sbjct: 208 C 208

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224068474|ref|XP_002326129.1| predicted protein [Populus trichocarpa] gi|222833322|gb|EEE71799.1| predicted protein [Populus trichocarpa]

 Score =  271 bits (692), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 127/182 (69%), Positives = 156/182 (85%), Gaps = 3/182 (1%)

Query: 1   RRPHVVNGGGFVVTDCSQKIIFRVDGCGVLGTKGELVVRHADGDAVVLIRRKGGVVEALS 60
           +RPHVV+GGGFVVTDCSQK++FRVDGCGV G++GEL++R + G+A++LIRRKGG+V+ALS
Sbjct: 30  KRPHVVSGGGFVVTDCSQKVVFRVDGCGVSGSEGELILRDSSGEALLLIRRKGGMVQALS 89

Query: 61  IHKKWKGYAFDYEGSKKLVFTLKEPPSSSCLVRNSSIRISTET--TARSSNFEVKGYFPD 118
           IH+KWKGY FDYEGS+KLVF+LKE P+ SCLVR ++IR+STE   + +  +FE+KGYFPD
Sbjct: 90  IHRKWKGYTFDYEGSQKLVFSLKE-PNFSCLVRKNAIRVSTEPRRSNKDWDFEIKGYFPD 148

Query: 119 RDCIIVDPSGNIVAQIGVKKEIQDLMESKDLYHIVVKPGIDQAFVVGVIATLDYIYGEST 178
           R C IVD  GNIVAQIG+ KE   LM +KDLYH+VV+PGIDQ F  GVIA LDYIYGEST
Sbjct: 149 RSCSIVDSLGNIVAQIGINKEEDQLMANKDLYHVVVRPGIDQVFTFGVIAVLDYIYGEST 208

Query: 179 RC 180
           RC
Sbjct: 209 RC 210

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356532780|ref|XP_003534948.1| PREDICTED: protein LURP-one-related 6-like [Glycine max]

 Score =  263 bits (671), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 126/184 (68%), Positives = 156/184 (84%), Gaps = 5/184 (2%)

Query: 1   RRPHVVNGGGFVVTDCS-QKIIFRVDGCGVLGTKGELVVRHADGDAVVLIRRKGGVVEAL 59
           +RPHVVNGGGFVVTDCS Q+++FRVDGCG+ GTKG+L++R  +GDA++L+RRKGG+VEAL
Sbjct: 21  KRPHVVNGGGFVVTDCSGQRVVFRVDGCGIHGTKGQLILRDGEGDALLLMRRKGGMVEAL 80

Query: 60  SIHKKWKGYAFDYEGSKKLVFTLKEPPSSSCLVRNSSIRISTETTARSS---NFEVKGYF 116
           SI+KKW GY+ +YEG + LVF+LKEP +S CLVRN++IRIS E    S+   +FEV+GYF
Sbjct: 81  SIYKKWNGYSVNYEGLQSLVFSLKEP-NSCCLVRNNAIRISIEPRNASNKGWDFEVRGYF 139

Query: 117 PDRDCIIVDPSGNIVAQIGVKKEIQDLMESKDLYHIVVKPGIDQAFVVGVIATLDYIYGE 176
           PDR C IVD  GN++AQ+GV KE++ LMESKDLYH+VVKPGIDQAFV GVIA LD IYGE
Sbjct: 140 PDRSCSIVDVRGNVIAQVGVNKEVEKLMESKDLYHVVVKPGIDQAFVFGVIAILDNIYGE 199

Query: 177 STRC 180
           ST C
Sbjct: 200 STHC 203

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357450041|ref|XP_003595297.1| hypothetical protein MTR_2g042230 [Medicago truncatula] gi|355484345|gb|AES65548.1| hypothetical protein MTR_2g042230 [Medicago truncatula] gi|388518905|gb|AFK47514.1| unknown [Medicago truncatula]

 Score =  259 bits (661), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 122/184 (66%), Positives = 156/184 (84%), Gaps = 5/184 (2%)

Query: 1   RRPHVVNGGGFVVTDC-SQKIIFRVDGCGVLGTKGELVVRHADGDAVVLIRRKGGVVEAL 59
           +RPHVVNGGGFVVTDC +QK++F+VDGCG+ G K EL++R  DG+ ++L+RRKGG+VEAL
Sbjct: 24  KRPHVVNGGGFVVTDCRTQKVVFKVDGCGIHGKKEELILRDGDGEPLLLMRRKGGMVEAL 83

Query: 60  SIHKKWKGYAFDYEGSKKLVFTLKEPPSSSCLVRNSSIRISTE---TTARSSNFEVKGYF 116
           SI+KKWKGY+ +YEG +KLVF+LKEP  +SCLV+N  IRI+ E    + +S +FE++GYF
Sbjct: 84  SIYKKWKGYSINYEGLQKLVFSLKEP-GNSCLVKNKGIRIAIEPGSVSNKSWDFEIRGYF 142

Query: 117 PDRDCIIVDPSGNIVAQIGVKKEIQDLMESKDLYHIVVKPGIDQAFVVGVIATLDYIYGE 176
           PD+ C IVD  GNIVAQ+G+ KE++ LME+KDLYH+VVKPG+DQAFV GVIATLDYIYGE
Sbjct: 143 PDKHCSIVDTRGNIVAQVGINKEVEKLMENKDLYHVVVKPGMDQAFVFGVIATLDYIYGE 202

Query: 177 STRC 180
           ST C
Sbjct: 203 STYC 206

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356556394|ref|XP_003546511.1| PREDICTED: protein LURP-one-related 6-like [Glycine max]

 Score =  259 bits (661), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 122/184 (66%), Positives = 156/184 (84%), Gaps = 5/184 (2%)

Query: 1   RRPHVVNGGGFVVTDCS-QKIIFRVDGCGVLGTKGELVVRHADGDAVVLIRRKGGVVEAL 59
           +RPHVVNGGGFVVTDCS Q+++FRVDGCG+  TKG+L++R  +GDA++L+RRKGG+VEAL
Sbjct: 23  KRPHVVNGGGFVVTDCSGQRVVFRVDGCGIHDTKGQLILRDGEGDALLLMRRKGGMVEAL 82

Query: 60  SIHKKWKGYAFDYEGSKKLVFTLKEPPSSSCLVRNSSIRISTE---TTARSSNFEVKGYF 116
            I+KKW GY+ +YEG + LVF+LKEP ++ CLV+N++IRIS E   ++ +  +FEV+GYF
Sbjct: 83  GIYKKWNGYSVNYEGLQSLVFSLKEP-NNCCLVKNNAIRISIEPRNSSNKGWDFEVRGYF 141

Query: 117 PDRDCIIVDPSGNIVAQIGVKKEIQDLMESKDLYHIVVKPGIDQAFVVGVIATLDYIYGE 176
           PDR C IVD  GN++AQ+GV KE++ LMESKDLYH+VVKPGIDQAFV GVIA LDYIYGE
Sbjct: 142 PDRSCSIVDVRGNVIAQVGVNKEVEKLMESKDLYHVVVKPGIDQAFVFGVIAILDYIYGE 201

Query: 177 STRC 180
           ST C
Sbjct: 202 STYC 205

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225444710|ref|XP_002278209.1| PREDICTED: protein LURP-one-related 6 [Vitis vinifera] gi|147777894|emb|CAN71378.1| hypothetical protein VITISV_001493 [Vitis vinifera] gi|297738553|emb|CBI27798.3| unnamed protein product [Vitis vinifera]

 Score =  259 bits (661), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 127/178 (71%), Positives = 147/178 (82%), Gaps = 5/178 (2%)

Query: 6   VNGGGFVVTDCSQKIIFRVDGCGVLGTKGELVVRHADGDAVVLIRRKGGVVEALSIHKKW 65
           +NGGGFVVTD SQ ++F+VDGCGVLGTKGEL+VR  DG A++LIRRKGGVV+ALSIH +W
Sbjct: 33  INGGGFVVTDSSQTVVFKVDGCGVLGTKGELIVRDGDGGALLLIRRKGGVVQALSIHGQW 92

Query: 66  KGYAFDYEGSKKLVFTLKEPPSSSCLVRNS-SIRISTETTARSSN--FEVKGYFPDRDCI 122
           KGY+FDYEG +KLVF+LKEP   SCL RN+ +IR S E      N  FE+ GYFPDRDC 
Sbjct: 93  KGYSFDYEGLQKLVFSLKEPK--SCLARNNITIRTSIEHNRGHKNWDFEINGYFPDRDCS 150

Query: 123 IVDPSGNIVAQIGVKKEIQDLMESKDLYHIVVKPGIDQAFVVGVIATLDYIYGESTRC 180
           IVD  GNIVAQ+GVKKE+ + M SKDLYH+V+KPGIDQAFV GVIA LDYIYGESTRC
Sbjct: 151 IVDSKGNIVAQVGVKKEVDEFMGSKDLYHVVIKPGIDQAFVFGVIAVLDYIYGESTRC 208

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351723407|ref|NP_001235998.1| uncharacterized protein LOC100306504 [Glycine max] gi|255628727|gb|ACU14708.1| unknown [Glycine max]

 Score =  248 bits (634), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 119/179 (66%), Positives = 150/179 (83%), Gaps = 5/179 (2%)

Query: 1   RRPHVVNGGGFVVTDCS-QKIIFRVDGCGVLGTKGELVVRHADGDAVVLIRRKGGVVEAL 59
           RRPHVVNGGGFVV DCS Q+++FRVDGCGV G KG+L++R  DGDA++L+RR GG+VEAL
Sbjct: 28  RRPHVVNGGGFVVMDCSAQRVVFRVDGCGVRGKKGDLILREGDGDALLLMRRMGGMVEAL 87

Query: 60  SIHKKWKGYAFDYEGSKKLVFTLKEPPSSSCLVRNSSIRISTETTARSSNFEVKGYFPDR 119
           SI+KKWK Y+ DYEGS+KLVF+L+EP  +SCLV+N++IRI T    R  +F++ G FPD+
Sbjct: 88  SIYKKWKCYSLDYEGSRKLVFSLREP--NSCLVKNNAIRIFTRNRGR--DFKISGCFPDK 143

Query: 120 DCIIVDPSGNIVAQIGVKKEIQDLMESKDLYHIVVKPGIDQAFVVGVIATLDYIYGEST 178
            C IVD  GN VAQ+G+ KE+++L+ESKDLYH+VV PG+DQAFV GVIA LDYIYGEST
Sbjct: 144 CCSIVDSKGNEVAQVGMMKEVEELIESKDLYHVVVNPGMDQAFVFGVIAVLDYIYGEST 202

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|373938247|dbj|BAL46495.1| hypothetical protein [Diospyros kaki]

 Score =  243 bits (619), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 116/183 (63%), Positives = 152/183 (83%), Gaps = 4/183 (2%)

Query: 1   RRPHVVNGGGFVVTDCSQKIIFRVDGCGVLGTKGELVVRHADGDAVVLIRRKGGVVEALS 60
           +RPHVV GGGFVV+DC QKI+FRVDGCG+LG + EL+VR  DGDA++LIRRK G+VEAL+
Sbjct: 28  KRPHVVYGGGFVVSDCGQKIVFRVDGCGMLGKQEELIVRDGDGDALLLIRRKRGIVEALN 87

Query: 61  IHKKWKGYAFDYEGSKKLVFTLKEPPSSSCLVRNSSIRISTETTARSS--NFEVKGYFPD 118
           I+K+WKG+A D+EG ++LVF+LKE P SSCLV+ + IRISTE     +  +FE+KGYF D
Sbjct: 88  INKQWKGHAVDFEGPQRLVFSLKE-PKSSCLVKKNPIRISTEPKGYGTKWDFEIKGYFKD 146

Query: 119 RDCIIVDPSGNIVAQIGVKKEIQDLM-ESKDLYHIVVKPGIDQAFVVGVIATLDYIYGES 177
           + C I+D  GNI+AQ+GV++E ++L+  SKDLYH+VV+PGIDQAF++G+IA LDYIY  S
Sbjct: 147 KACCIIDSHGNIIAQVGVEEEAEELIPASKDLYHVVVRPGIDQAFIIGLIAVLDYIYDGS 206

Query: 178 TRC 180
           TRC
Sbjct: 207 TRC 209

Source: Diospyros kaki

Species: Diospyros kaki

Genus: Diospyros

Family: Ebenaceae

Order: Ericales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15225013|ref|NP_178648.1| LURP-one-related 6 protein [Arabidopsis thaliana] gi|75216773|sp|Q9ZUF7.1|LOR6_ARATH RecName: Full=Protein LURP-one-related 6 gi|4006826|gb|AAC95168.1| unknown protein [Arabidopsis thaliana] gi|45752734|gb|AAS76265.1| At2g05910 [Arabidopsis thaliana] gi|51970670|dbj|BAD44027.1| unknown protein [Arabidopsis thaliana] gi|330250889|gb|AEC05983.1| LURP-one-related 6 protein [Arabidopsis thaliana]

 Score =  225 bits (573), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 111/180 (61%), Positives = 140/180 (77%), Gaps = 9/180 (5%)

Query: 1   RRPHVVNGGGFVVTDCSQKIIFRVDGCGVLGTKGELVVRHADGDAVVLIRRKGGVVEALS 60
           RRPHVVNGGGFVVTD  +KI+F++DGCGVLGTKGELV+R +DG+ ++LI +KGGVV+ALS
Sbjct: 21  RRPHVVNGGGFVVTDYKEKIVFKIDGCGVLGTKGELVLRDSDGNDLLLIHKKGGVVQALS 80

Query: 61  IHKKWKGYAFDYEGSKKLVFTLKEPPSSSCLVRNSSIRISTETTARSSNFEVKGYFPDRD 120
           IH KWKGY++DY+GS K VFTL++ P  SC    SSIRIS      +  F+VKGYFPDRD
Sbjct: 81  IHNKWKGYSYDYQGSPKPVFTLRD-PKHSCFSITSSIRIS--VGPGNCYFDVKGYFPDRD 137

Query: 121 CIIVDPSGNIVAQIGVKKEIQDLMESKDLYHIVVKPGIDQAFVVGVIATLDYIYGESTRC 180
           C IVD  GN++AQ      +++ + S+D+Y +V KP +D+AFV GVIA LDYIYGEST C
Sbjct: 138 CSIVDSKGNVIAQ------VKEWIGSRDIYKVVTKPSVDKAFVFGVIAVLDYIYGESTSC 191

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297835842|ref|XP_002885803.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297331643|gb|EFH62062.1| predicted protein [Arabidopsis lyrata subsp. lyrata]

 Score =  223 bits (569), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 107/180 (59%), Positives = 141/180 (78%), Gaps = 9/180 (5%)

Query: 1   RRPHVVNGGGFVVTDCSQKIIFRVDGCGVLGTKGELVVRHADGDAVVLIRRKGGVVEALS 60
           RRPHVVNGGGFVVTDC + I+F++DGCGVLGTKGELV+R  DG+ ++LI +KGG+V+ALS
Sbjct: 21  RRPHVVNGGGFVVTDCKENIVFKIDGCGVLGTKGELVLRDGDGNDLLLINKKGGMVQALS 80

Query: 61  IHKKWKGYAFDYEGSKKLVFTLKEPPSSSCLVRNSSIRISTETTARSSNFEVKGYFPDRD 120
           IH KWKGY++DY+GS K VF+L++ P  SC     SIRIS +    +  F+VKGYFPDRD
Sbjct: 81  IHNKWKGYSYDYQGSPKPVFSLRD-PKHSCFSIIGSIRISVQPG--NCYFDVKGYFPDRD 137

Query: 121 CIIVDPSGNIVAQIGVKKEIQDLMESKDLYHIVVKPGIDQAFVVGVIATLDYIYGESTRC 180
           C I+D +GN++AQ      +++ + S+D+Y +V+KP +D+AFV GVIA LDYIYGEST C
Sbjct: 138 CGIIDSTGNVIAQ------VKEWIGSRDIYKVVIKPSVDKAFVFGVIAVLDYIYGESTSC 191

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	180
TAIR|locus:2064686	191	AT2G05910 "AT2G05910" [Arabido	0.95	0.895	0.616	2e-56
TAIR|locus:2180459	215	AT5G20640 "AT5G20640" [Arabido	0.994	0.832	0.515	3.1e-51
TAIR|locus:2016299	210	AT1G80120 "AT1G80120" [Arabido	0.888	0.761	0.323	2.2e-18
TAIR|locus:2093242	220	AT3G15810 "AT3G15810" [Arabido	0.883	0.722	0.274	2e-15
TAIR|locus:2181082	217	AT5G01750 "AT5G01750" [Arabido	0.938	0.778	0.265	2.1e-13
TAIR|locus:2081481	194	AT3G11740 "AT3G11740" [Arabido	0.955	0.886	0.268	5e-12
TAIR|locus:2055250	207	LURP1 "AT2G14560" [Arabidopsis	0.905	0.787	0.222	1.4e-09
TAIR|locus:2160427	221	AT5G41590 "AT5G41590" [Arabido	0.933	0.760	0.233	6.4e-07
TAIR|locus:2064179	196	AT2G38640 "AT2G38640" [Arabido	0.877	0.806	0.245	9.4e-06
TAIR|locus:4515103053	197	AT3G10986 "AT3G10986" [Arabido	0.922	0.842	0.255	9.7e-06

TAIR|locus:2064686 AT2G05910 "AT2G05910" [Arabidopsis thaliana (taxid:3702)]

 Score = 581 (209.6 bits), Expect = 2.0e-56, P = 2.0e-56
 Identities = 111/180 (61%), Positives = 140/180 (77%)

Query:     1 RRPHVVNGGGFVVTDCSQKIIFRVDGCGVLGTKGELVVRHADGDAVVLIRRKGGVVEALS 60
             RRPHVVNGGGFVVTD  +KI+F++DGCGVLGTKGELV+R +DG+ ++LI +KGGVV+ALS
Sbjct:    21 RRPHVVNGGGFVVTDYKEKIVFKIDGCGVLGTKGELVLRDSDGNDLLLIHKKGGVVQALS 80

Query:    61 IHKKWKGYAFDYEGSKKLVFTLKEPPSSSCLVRNSSIRISTETTARSSNFEVKGYFPDRD 120
             IH KWKGY++DY+GS K VFTL++P   SC    SSIRIS      +  F+VKGYFPDRD
Sbjct:    81 IHNKWKGYSYDYQGSPKPVFTLRDP-KHSCFSITSSIRISVGPG--NCYFDVKGYFPDRD 137

Query:   121 CIIVDPSGNIVAQIGVKKEIQDLMESKDLYHIVVKPGIDQAFVVGVIATLDYIYGESTRC 180
             C IVD  GN++AQ+      ++ + S+D+Y +V KP +D+AFV GVIA LDYIYGEST C
Sbjct:   138 CSIVDSKGNVIAQV------KEWIGSRDIYKVVTKPSVDKAFVFGVIAVLDYIYGESTSC 191

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2180459 AT5G20640 "AT5G20640" [Arabidopsis thaliana (taxid:3702)]

 Score = 532 (192.3 bits), Expect = 3.1e-51, P = 3.1e-51
 Identities = 97/188 (51%), Positives = 147/188 (78%)

Query:     1 RRPHVVNGGGFVVTDCSQKIIFRVDGCGVLGTKGELVVRHADGDAVVLIRRKGGVVEALS 60
             RRP +VNGGGFVV++  Q ++FRVDGCGVLGTKG+L++R+ DG+ ++LIR+ GG+V+AL+
Sbjct:    29 RRPPMVNGGGFVVSNSKQVVVFRVDGCGVLGTKGKLLLRNGDGNDLLLIRKMGGIVQALN 88

Query:    61 -IHKKWKGYAFDYEGSKKLVFTLKEPPSSSCLVRNSSIRISTE------TTARSSNFEVK 113
              +H KW+G+ +D EG+++LVFTLK+P   SCLV+NSSI+I         ++ R++  E+K
Sbjct:    89 MVHNKWEGFGYDNEGTERLVFTLKDP-KDSCLVQNSSIKILVHGKPPKISSTRNNYVEIK 147

Query:   114 GYFPDRDCIIVDPSGNIVAQIGVKKEIQDLM-ESKDLYHIVVKPGIDQAFVVGVIATLDY 172
             G F +R C I+D  G  +A++ ++KE+++++   KDLYH++VKP +DQ+F+VG+IA LDY
Sbjct:   148 GSFAERACNIMDSDGKAIAKVRIEKEMEEMVGNKKDLYHVIVKPNVDQSFIVGLIAILDY 207

Query:   173 IYGESTRC 180
             I+GEST C
Sbjct:   208 IHGESTIC 215

GO:0003674 "molecular_function" evidence=ND

TAIR|locus:2016299 AT1G80120 "AT1G80120" [Arabidopsis thaliana (taxid:3702)]

 Score = 222 (83.2 bits), Expect = 2.2e-18, P = 2.2e-18
 Identities = 56/173 (32%), Positives = 95/173 (54%)

Query:     8 GGGFVVTDCSQKIIFRVDGCGVLGTKG--ELVVRHADGDAVVLIRRKGGVVEALSIHKKW 65
             G GF V DC   ++FRVD  G   T+   E+V+  A G  ++ +RRK       S+ ++W
Sbjct:    30 GDGFTVYDCKGSLVFRVDSYGGPNTRDTDEVVLMDAHGRCLLTLRRKRP-----SLRRRW 84

Query:    66 KGYAFDYEGSKKLVFTLKEPPSSSCLVRNSSIRISTETTARSSNFEVKGYFPDRDCIIVD 125
             +GY  +    +K +F ++    SS + RNS + +      + S + ++G F  R+C +V+
Sbjct:    85 EGYLGERSDGQKPIFGVRR---SSIIGRNS-VTVEVYGDYQCSEYLIEGSFGARNCTVVE 140

Query:   126 P-SGNIVAQIGVKKEIQ-DLMESKDLYHIVVKPGIDQAFVVGVIATLDYIYGE 176
               +   VA+I  K +   ++M  KD++ + VKPG D AF +G++  LD IYG+
Sbjct:   141 AETRRKVAEIRRKVDASTNVMLGKDVFSLNVKPGFDGAFAMGLVLVLDQIYGD 193

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2093242 AT3G15810 "AT3G15810" [Arabidopsis thaliana (taxid:3702)]

 Score = 194 (73.4 bits), Expect = 2.0e-15, P = 2.0e-15
 Identities = 47/171 (27%), Positives = 86/171 (50%)

Query:     8 GGGFVVTDCSQKIIFRVDGCGV-LGTKGELVVRHADGDAVVLIRRKGGVVEALSIHKKWK 66
             G GF   DC   IIFRVD  G       E+V+  A G  ++ ++RK       ++H++W+
Sbjct:    44 GDGFAAYDCRGDIIFRVDSYGPDTRDNDEIVLMDATGKCLLTVKRKRP-----TLHQRWE 98

Query:    67 GYAFDYEGSKKLVFTLKEPPSSSCLVRNSSIRISTETTARSSNFEVKGYFPDRDCIIVDP 126
             G+  +    +K +F+++     S ++   ++ +          + + G F  R C+I D 
Sbjct:    99 GFLGERSEGQKPIFSVRR----SSIIGRCTMEVEVYD-GTGEEYIIDGDFSQRSCLIYDT 153

Query:   127 SGNIVAQIGVKKEIQ-DLMESKDLYHIVVKPGIDQAFVVGVIATLDYIYGE 176
                 VA+I  K +   ++M  +D++ + +KPG D AF +G++  LD I G+
Sbjct:   154 KKCTVAEIKRKVDASTNVMLGRDVFTLEIKPGFDGAFAMGLVVVLDQINGD 204

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2181082 AT5G01750 "AT5G01750" [Arabidopsis thaliana (taxid:3702)]

 Score = 175 (66.7 bits), Expect = 2.1e-13, P = 2.1e-13
 Identities = 47/177 (26%), Positives = 84/177 (47%)

Query:     1 RRPHVVNGGGFVVTDCSQKIIFRVDGCGVLGTKGELVVRHADGDAVVLIRRKGGVVEALS 60
             R+   +  G FV+TD +  ++F+V    V G   + V+    G  VV +R K      +S
Sbjct:    44 RKMMSLTDGNFVITDVNGNLLFKVKE-PVFGLHDKRVLLDGSGTPVVTLREK-----MVS 97

Query:    61 IHKKWKGYAFDYEGSKKLVFTLKEPPSSSCLVRNSSIRISTETTARSSNFEVKGYFPDRD 120
             +H +W+ +       + L++T+K   S   L     + +      +  +F VKG + +R 
Sbjct:    98 MHDRWQVFRGGSTDQRDLLYTVKRS-SMLQLKTKLDVFLGHNKDEKRCDFRVKGSWLERS 156

Query:   121 CII-VDPSGNIVAQIGVKKEIQDLMESKDLYHIVVKPGIDQAFVVGVIATLDYIYGE 176
             C++    S  IVAQ+  K  +Q +   KD + + V P +D AF+  ++  LD +  E
Sbjct:   157 CVVYAGESDAIVAQMHRKHTVQSVFLGKDNFSVTVYPNVDYAFIASLVVILDDVNRE 213

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=IDA

GO:0006569 "tryptophan catabolic process" evidence=RCA

GO:0006995 "cellular response to nitrogen starvation" evidence=RCA

GO:0009684 "indoleacetic acid biosynthetic process" evidence=RCA

GO:0030003 "cellular cation homeostasis" evidence=RCA

GO:0070838 "divalent metal ion transport" evidence=RCA

TAIR|locus:2081481 AT3G11740 "AT3G11740" [Arabidopsis thaliana (taxid:3702)]

 Score = 162 (62.1 bits), Expect = 5.0e-12, P = 5.0e-12
 Identities = 48/179 (26%), Positives = 81/179 (45%)

Query:     1 RRPHVVNGGGFVVTDCSQKIIFRVDGCGVLGTKGELVVRHADGDAVVLIRRKGGVVEALS 60
             R+   +  G F VTD +  ++F+V    +     + ++  A  D  +L  R+  V    S
Sbjct:    20 RKVMTLTDGNFAVTDVNGNLLFKVKE-PLFSISDKRILLDAY-DTPILTLRENKV----S 73

Query:    61 IHKKWKGYAFDYEGSKKLVFTLKEPPSSSCLVRNSSIRISTETTARSSNFEVKGYFPDRD 120
             +H +W  Y         L++TLK       +     I ++     +  +F VKG + DR 
Sbjct:    74 LHDRWLVYRGKSTDQSDLLYTLKRSSMIQIMKPKLDIFLAHNKEMKICDFHVKGSWIDRS 133

Query:   121 CII-VDPSGNIVAQIGVKKEIQDLMESKDLYHIVVKPGIDQAFVVGVIATLDYIYGEST 178
             C++    S  IVAQ+  K   Q ++  K  + + V P +D AF+V +I  LD I  E +
Sbjct:   134 CVVYAGKSDAIVAQMHKKHTAQSILIGKSNFSVTVYPNVDFAFIVSLIVILDDINREDS 192

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2055250 LURP1 "AT2G14560" [Arabidopsis thaliana (taxid:3702)]

 Score = 139 (54.0 bits), Expect = 1.4e-09, P = 1.4e-09
 Identities = 38/171 (22%), Positives = 78/171 (45%)

Query:     1 RRPHVVNGGGFVVTDCSQKIIFRVDGCGVLGTKGELVVRHADGDAVVLIRRKGGVVEALS 60
             R+   +  G FV+T    K++F+V    +    G+ ++    G  V+ +R K      ++
Sbjct:    24 RKVMKITDGNFVITSADGKLLFKVKD-PLFSLHGKRILLDCSGAKVLTLRGK-----MMT 77

Query:    61 IHKKWKGYAFDYEGSKKLVFTLKEPPSSSCLVRNSSIRISTETTARSSNFEVKGYFPDRD 120
             +H +W+ +         L++T+K   S   L     + ++     +  +F+VKG + D  
Sbjct:    78 MHDRWQVFRGGSTEEGALLYTVKRS-SMIQLAPKLEVFLANNVEEKICDFKVKGAWLDDS 136

Query:   121 CII-VDPSGNIVAQIGVKKEIQDLMESKDLYHIVVKPGIDQAFVVGVIATL 170
             C++    S  I+A +  K+ ++     KD + + V   +D AF+  +I  L
Sbjct:   137 CVVYAGDSDTIIAHMCGKQTMRGFFFGKDHFSVTVDKNVDYAFIASLIVIL 187

GO:0003674 "molecular_function" evidence=ND

GO:0009751 "response to salicylic acid stimulus" evidence=IEP

GO:0050832 "defense response to fungus" evidence=RCA;IMP

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009595 "detection of biotic stimulus" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0043900 "regulation of multi-organism process" evidence=RCA

GO:0045088 "regulation of innate immune response" evidence=RCA

TAIR|locus:2160427 AT5G41590 "AT5G41590" [Arabidopsis thaliana (taxid:3702)]

 Score = 125 (49.1 bits), Expect = 6.4e-07, P = 6.4e-07
 Identities = 43/184 (23%), Positives = 91/184 (49%)

Query:     1 RRPHVVNGGGFVVTDCSQKIIFRVDGCGVLGTKGELVVRHADGDAVVLIRRKGGVVEALS 60
             R+  +V+  GF V D +  +I+RVD       + EL++   DG++++L+ R     + ++
Sbjct:    43 RKSLLVSCEGFTVIDSNGDLIYRVDNYARTRPE-ELILMDKDGNSLLLMHR----TKKIT 97

Query:    61 IHKKWKGY-AFDYEGSKKL----VFTLKEPPSSSCLVRNSSIR--ISTETTARSSNFEVK 113
             +   W  Y A D +G  K+     + +++    + L   S I   + + +  + +++ +K
Sbjct:    98 LVDSWGIYEANDTKGETKIPKCPTWYMRKNLKMNILSTKSDILAYVYSGSFDKKNSYIIK 157

Query:   114 GYFPDRDCIIVD-PSGNIVAQIGVKKEIQD--LMESKDLYHIVVKPGIDQAFVVGVIATL 170
             G +  + C IV  P    V +I  +KE++   +    D++ +VV PG D    + ++  L
Sbjct:   158 GSYRCKSCKIVHVPLNKTVVEIK-RKEVRTKGVRFGSDVFDLVVNPGFDTGLAMALVLLL 216

Query:   171 DYIY 174
             D ++
Sbjct:   217 DQMF 220

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2064179 AT2G38640 "AT2G38640" [Arabidopsis thaliana (taxid:3702)]

 Score = 116 (45.9 bits), Expect = 9.4e-06, P = 9.4e-06
 Identities = 43/175 (24%), Positives = 83/175 (47%)

Query:     7 NGGGFVVTDCSQKIIFRVDGCGVLGTKGELVVRHADGDAVVLIRRKGGVVEALSIHKKWK 66
             N  GF V + + +++FRVD   +   +  +V+  A G  ++ IRRK      LS+   W 
Sbjct:    35 NCDGFTVYNANGELVFRVDNY-MNCPRDNIVLMDASGFPLLSIRRK-----KLSLGDCWM 88

Query:    67 GYAFDYEGSKKLVFTLKEPPSSSCLVRNSSIR-ISTETTARSSNFEVKGYFPDRDCIIVD 125
              Y  D E  +  +FT ++  + S +    S+  +S + T     +E++G +  R C I+D
Sbjct:    89 VY--DGETERDPIFTARK--NVSIISNRKSLAWVSAKKTVL---YEIEGSYGQRSCKILD 141

Query:   126 PSGNIVAQIGVKKE---IQDLMESKDLYHIVVKPGIDQAFVVGVIATLDYIYGES 177
                N      +K++   I  +   KD+Y ++V+  ++    + +   LD ++  S
Sbjct:   142 ERRNKKKTAEIKRKETVIGGVAFGKDVYKLIVESEMEPRVAMALTIILDQMFRSS 196

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:4515103053 AT3G10986 "AT3G10986" [Arabidopsis thaliana (taxid:3702)]

 Score = 116 (45.9 bits), Expect = 9.7e-06, P = 9.7e-06
 Identities = 45/176 (25%), Positives = 81/176 (46%)

Query:     1 RRPHVVNGGGFVVTDCSQKIIFRVDGCGVLGTKGELVVRHADGDAVVLIRRKGGVVEALS 60
             RR   +    + V D S  +IF VDG G+   + + V+R A G  ++ +R KG V     
Sbjct:    21 RRRESLKRERYDVFDLSNNLIFTVDG-GIWNIRRKRVLRDAAGIPLLSMRTKGLV----P 75

Query:    61 IHKKWKGYAFDYEGSKKLVFTLKEPP----SSSCLVRNSSIRISTETTARSSNFEVKGYF 116
             +   W+ Y  D   S  L+F+ +EP      +S  V     + ST+ ++   +F+  G +
Sbjct:    76 MRYNWEVYKGDSTESDNLLFSAREPNLLSFKTSLDVTLPPDQSSTDISSVEPDFQTFGRY 135

Query:   117 PDRDCIIVDPSGN-IVAQIGVKKEIQDLMESKDLYHIVVKPGIDQAFVVGVIATLD 171
                   + +P  N ++A++        L++    + + V P +D AFVV ++   D
Sbjct:   136 IGSSFKLFEPIHNTLLAEVVHDFTWGGLIKGSYSFKVRVNPYVDFAFVVALLVITD 191

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9ZUF7	LOR6_ARATH	No assigned EC number	0.6166	0.95	0.8952	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: eugene3.00280034 hypothetical protein (210 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	180
pfam04525	185	pfam04525, Tub_2, Tubby C 2	4e-38

>gnl|CDD|218129 pfam04525, Tub_2, Tubby C 2

 Score =  129 bits (325), Expect = 4e-38
 Identities = 54/173 (31%), Positives = 92/173 (53%), Gaps = 15/173 (8%)

Query: 1   RRPHVVNGGGFVVTDCSQKIIFRVDGCGVLGTKGELVVRHADGDAVVLIRRKGGVVEALS 60
           R+  V NG GF V D +  ++FRVDG    G   E V+  + G+ ++ IRRK      LS
Sbjct: 20  RKSLVFNGDGFTVYDSNGNLVFRVDGYA-FGLSDERVLMDSSGNPLLTIRRKK-----LS 73

Query: 61  IHKKWKGYAFDYEGSKKLVFTLKE------PPSSSCLVRNSSIRISTETTARSSNFEVKG 114
           +H +W+ Y  +    K  +FT++         SSS   + +S  I  +    + +F++KG
Sbjct: 74  LHDRWEVYRGEGTEGKDPLFTVRRSSIVQLKTSSSVFSKRNSNVIVDDEK--NCDFDIKG 131

Query: 115 YFPDRDCIIVDPSGNIVAQIGVKKEIQDLMESKDLYHIVVKPGIDQAFVVGVI 167
            F DR C I D S  ++A++  ++  + +   KD+Y + VKP +D AF++ ++
Sbjct: 132 SFLDRSCKIYDDSDKLIAEVK-RQTSKGVFLGKDVYTVTVKPEVDYAFIMALV 183

The structure of this family has been solved. It comprises a 12-stranded beta barrel with a central C-terminal alpha helix. This helix is thought to be a transmembrane helix. It is structurally similar to the C-terminal domain of the Tubby protein. In plants it plays a role in defense against pathogens. Length = 185

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	180
PF04525	187	Tub_2: Tubby C 2; InterPro: IPR007612 This is a fa	100.0
COG4894	159	Uncharacterized conserved protein [Function unknow	100.0
PF03803	221	Scramblase: Scramblase ; InterPro: IPR005552 Scram	99.62
COG4894	159	Uncharacterized conserved protein [Function unknow	98.24
PF04525	187	Tub_2: Tubby C 2; InterPro: IPR007612 This is a fa	97.68
KOG0621	292	consensus Phospholipid scramblase [Cell wall/membr	97.33
PF03803	221	Scramblase: Scramblase ; InterPro: IPR005552 Scram	96.24

>PF04525 Tub_2: Tubby C 2; InterPro: IPR007612 This is a family of plant and bacterial uncharacterised proteins

Probab=100.00  E-value=2.2e-42  Score=274.04  Aligned_cols=160  Identities=31%  Similarity=0.523  Sum_probs=97.2

Q ss_pred             CcCeEEEcCCEEEEcCCCCEEEEEec-cccCCCCCeEEEECCCCCeEEEEEEcCceeeeecccceeEEEEecCCCCceeE
Q 041057            1 RRPHVVNGGGFVVTDCSQKIIFRVDG-CGVLGTKGELVVRHADGDAVVLIRRKGGVVEALSIHKKWKGYAFDYEGSKKLV   79 (180)
Q Consensus         1 ~k~l~~~gd~f~V~D~~G~~vf~V~g-~~~~s~~~~~~l~D~~G~~L~~i~~k~~~~~~~sl~~~w~v~~~~~~~~~~~~   79 (180)
                      ||++++++|+|+|+|++|+++|+|+| + .+++++++.|+|++|+||++|++|     +++++++|++|++++.+..+++
T Consensus        20 ~k~~~~~~~~f~V~D~~G~~vf~V~g~~-~~s~~~~~~l~D~~G~~L~~i~~k-----~~~l~~~w~i~~~~~~~~~~~i   93 (187)
T PF04525_consen   20 KKSLSFSGDDFTVYDENGNVVFRVDGGK-FFSIGKKRTLMDASGNPLFTIRRK-----LFSLRPTWEIYRGGGSEGKKPI   93 (187)
T ss_dssp             ----------EEEEETTS-EEEEEE--S-CTTBTTEEEEE-TTS-EEEEEE-------------EEEEEETT---GGGEE
T ss_pred             EEEeeecCCCEEEEcCCCCEEEEEEEec-ccCCCCEEEEECCCCCEEEEEEee-----ecccceEEEEEECCCCccCceE
Confidence            57889999999999999999999999 6 789999999999999999999999     6999999999999876666799


Q ss_pred             EEEEcCCCCcceeecceEEEEEecC-------CCcceEEEEeecCCcceEEEcCCCCEEEEEEeeeeeeeeeeeeeeEEE
Q 041057           80 FTLKEPPSSSCLVRNSSIRISTETT-------ARSSNFEVKGYFPDRDCIIVDPSGNIVAQIGVKKEIQDLMESKDLYHI  152 (180)
Q Consensus        80 ftvkk~~~~~~~~~k~~~~v~l~~~-------~~~~~~~v~G~~~~~~~~I~~~~g~~VAeV~rk~~~~~~~~g~dty~v  152 (180)
                      |++|+++   .++.++++.+++.+.       ++.++|+|+|||++++|+|++.+|++||||+||+...++++|+|+|.|
T Consensus        94 ~tvkk~~---~~~~~~~~~~f~~~~~~~~~~~~~~~~~~i~G~~~~~~~~I~~~~g~~VA~i~rk~~~k~~~~~~dty~l  170 (187)
T PF04525_consen   94 FTVKKKS---MLQNKDSFDVFLPPKSNISIDDSEGPDFEIKGNFWDRSFTIYDSGGRVVAEISRKYSSKKWFSGRDTYTL  170 (187)
T ss_dssp             EEEE-------------EEEEET--T----------SEEEES-TTTT--EEEECC--EEEEEEE----------B-SEEE
T ss_pred             EEEEEec---ccCCCcceeEEEecccceeecCCCCceEEEEEEecCcEEEEEEcCCCEEEEEecccceeeEEecCcEEEE
Confidence            9999986   366788888887632       367799999999999999997679999999999888889999999999


Q ss_pred             EEeCCCCHHHHHHHHHH
Q 041057          153 VVKPGIDQAFVVGVIAT  169 (180)
Q Consensus       153 ~V~pgvD~ali~alvv~  169 (180)
                      +|+||+|++||+|||||
T Consensus       171 ~V~pg~D~~lv~alvvi  187 (187)
T PF04525_consen  171 TVAPGVDQALVVALVVI  187 (187)
T ss_dssp             EE-TTSBHHHHHHHHHH
T ss_pred             EEcCCCCHHHheeEEeC
Confidence            99999999999999997

; PDB: 1ZXU_A 2Q4M_A.

>COG4894 Uncharacterized conserved protein [Function unknown]

Probab=100.00  E-value=5e-34  Score=213.62  Aligned_cols=146  Identities=22%  Similarity=0.354  Sum_probs=131.2

Q ss_pred             CeEEEcCCEEEEcCCCCEEEEEeccccCCCCCeEEEECCCCCeEEEEEEcCceeeeecccceeEEEEecCCCCceeEEEE
Q 041057            3 PHVVNGGGFVVTDCSQKIIFRVDGCGVLGTKGELVVRHADGDAVVLIRRKGGVVEALSIHKKWKGYAFDYEGSKKLVFTL   82 (180)
Q Consensus         3 ~l~~~gd~f~V~D~~G~~vf~V~g~~~~s~~~~~~l~D~~G~~L~~i~~k~~~~~~~sl~~~w~v~~~~~~~~~~~~ftv   82 (180)
                      .+++-||.|.|+|.+|+.+|+|+|. ++++++.+++.|++|.+|.+|++|     ++++.|+|++-.|++     ..|.+
T Consensus        13 k~~~~gd~f~I~d~dgE~af~VeGs-~f~i~dtlti~Da~G~~l~~i~~k-----ll~l~~~yeI~d~~g-----~~~~v   81 (159)
T COG4894          13 KMFSFGDAFHIYDRDGEEAFKVEGS-FFSIGDTLTITDASGKTLVSIEQK-----LLSLLPRYEISDGGG-----TVCEV   81 (159)
T ss_pred             hhhhcccceEEECCCCcEEEEEeee-EEeeCceEEEEecCCCChHHHHHH-----HhhccceeEEEcCCC-----CEEEE
Confidence            4677889999999999999999996 899999999999999999999999     799999999988875     48889


Q ss_pred             EcCCCCcceeecceEEEEEecCCCcceEEEEeecCCcceEEEcCCCCEEEEEEeeeeeeeeeeeeeeEEEEEeCCCCHHH
Q 041057           83 KEPPSSSCLVRNSSIRISTETTARSSNFEVKGYFPDRDCIIVDPSGNIVAQIGVKKEIQDLMESKDLYHIVVKPGIDQAF  162 (180)
Q Consensus        83 kk~~~~~~~~~k~~~~v~l~~~~~~~~~~v~G~~~~~~~~I~~~~g~~VAeV~rk~~~~~~~~g~dty~v~V~pgvD~al  162 (180)
                      +|+.  +++  ++++.+      +..+|+++||+|+.+|++.++ ++++|+|+||     |++|+|||.|+|+|+.|.++
T Consensus        82 rKK~--tf~--Rdk~e~------d~~~~eihGNi~d~efkl~dg-~~~~aeVsKk-----wf~~rdTY~l~vapde~a~l  145 (159)
T COG4894          82 RKKV--TFS--RDKFEI------DGLNWEIHGNIWDDEFKLTDG-ENVRAEVSKK-----WFSWRDTYHLQVAPDEDALL  145 (159)
T ss_pred             EEEE--EEE--eeeEEE------cCCCeEEecceeceEEEEecC-Cceehhheee-----eEeccceEEEEEcCchhhHH
Confidence            8886  333  777766      345699999999999999986 6799999998     68999999999999999999


Q ss_pred             HHHHHHHhhhhcC
Q 041057          163 VVGVIATLDYIYG  175 (180)
Q Consensus       163 i~alvv~lD~i~~  175 (180)
                      |+|++||+|++.+
T Consensus       146 ii~i~VaLD~v~~  158 (159)
T COG4894         146 IIAIAVALDMVLY  158 (159)
T ss_pred             HHHHHHHHHHHhc
Confidence            9999999999875

>PF03803 Scramblase: Scramblase ; InterPro: IPR005552 Scramblase is palmitoylated and contains a potential protein kinase C phosphorylation site

Probab=99.62  E-value=4.7e-14  Score=114.14  Aligned_cols=153  Identities=22%  Similarity=0.310  Sum_probs=120.1

Q ss_pred             cCCEEEEcCCCCEEEEEeccc-cC-----C--CCCeEEEECCCCCeEEEEEEcCceeeeecc-------cceeEEEEecC
Q 041057            8 GGGFVVTDCSQKIIFRVDGCG-VL-----G--TKGELVVRHADGDAVVLIRRKGGVVEALSI-------HKKWKGYAFDY   72 (180)
Q Consensus         8 gd~f~V~D~~G~~vf~V~g~~-~~-----s--~~~~~~l~D~~G~~L~~i~~k~~~~~~~sl-------~~~w~v~~~~~   72 (180)
                      .+.|.|+|.+|+.+|.+...+ ..     +  .+-+..++|+.|+++++++|.      +++       ..+.+|+.+. 
T Consensus        42 ~N~Y~I~n~~g~~i~~~~E~s~~~~R~~~~~~R~f~~~i~D~~g~~vl~i~Rp------~~c~~C~~~~~~~~~V~~p~-  114 (221)
T PF03803_consen   42 PNRYDIKNPNGQQIYYAVEESDCCSRQCCGSHRPFKMHIYDNYGREVLTIERP------FKCCSCCPCCLQEMEVESPP-  114 (221)
T ss_pred             CceEEEECCCCCEEEEEEEeCcceeeeecCCCCCEEEEEEecCCCEEEEEEcC------CcceecccccceeEEEecCC-
Confidence            489999999999999886542 11     1  233578999999999999998      332       3455664443 


Q ss_pred             CCCceeEEEEEcCCCCcceeecceEEEEEecCCCcceEEEEee------cCCcceEEEcCCCCEEEEEEeeeee--eeee
Q 041057           73 EGSKKLVFTLKEPPSSSCLVRNSSIRISTETTARSSNFEVKGY------FPDRDCIIVDPSGNIVAQIGVKKEI--QDLM  144 (180)
Q Consensus        73 ~~~~~~~ftvkk~~~~~~~~~k~~~~v~l~~~~~~~~~~v~G~------~~~~~~~I~~~~g~~VAeV~rk~~~--~~~~  144 (180)
                         ++++.+|++++  +++  +++++|.-++  ....+.|+|.      +.+..|.|++.+|+.||+|+|+|+.  .+.+
T Consensus       115 ---g~~iG~I~q~~--~~~--~~~f~I~d~~--~~~~~~I~gp~~~~~~~~~~~F~I~~~~~~~vg~I~k~w~G~~~e~~  185 (221)
T PF03803_consen  115 ---GNLIGSIRQPF--SCC--RPNFDIFDAN--GNPIFTIKGPCCCCSCCCDWEFEIKDPNGQEVGSITKKWSGFCRELF  185 (221)
T ss_pred             ---CcEEEEEEEcC--ccc--ceEEEEEECC--CceEEEEeCCcceeccccceeeeeecccCcEEEEEEEecCCcchhhc
Confidence               56999999886  455  7888887555  3556888887      4577899999778999999999874  3567


Q ss_pred             eeeeeEEEEEeCCCCH---HHHHHHHHHhhhhcCC
Q 041057          145 ESKDLYHIVVKPGIDQ---AFVVGVIATLDYIYGE  176 (180)
Q Consensus       145 ~g~dty~v~V~pgvD~---ali~alvv~lD~i~~~  176 (180)
                      ...|.|.|+..+..|.   |+++|.++.+|.++-|
T Consensus       186 t~~d~f~i~Fp~~l~~~~Kalll~a~~liD~~~Fe  220 (221)
T PF03803_consen  186 TDADNFVIEFPPDLDVEQKALLLGAAFLIDYMYFE  220 (221)
T ss_pred             cccceEEEEcCCCCCHHHHHHHHHHHHHhhhhhhc
Confidence            7899999999999887   8899999999999865

Scramblase exhibits Ca2+-activated phospholipid scrambling activity in vitro. There are also possible SH3 and WW binding motifs. Scramblase is involved in the redistribution of phospholipids after cell activation or injury [].

>COG4894 Uncharacterized conserved protein [Function unknown]

Probab=98.24  E-value=2.1e-06  Score=65.13  Aligned_cols=86  Identities=13%  Similarity=0.172  Sum_probs=63.1

Q ss_pred             EcCCEEEEcCCCCEEEEEeccccCCCCCeEEEECCCCCeEEEEEEcCceeeeecccceeEEEEec----C---------C
Q 041057            7 NGGGFVVTDCSQKIIFRVDGCGVLGTKGELVVRHADGDAVVLIRRKGGVVEALSIHKKWKGYAFD----Y---------E   73 (180)
Q Consensus         7 ~gd~f~V~D~~G~~vf~V~g~~~~s~~~~~~l~D~~G~~L~~i~~k~~~~~~~sl~~~w~v~~~~----~---------~   73 (180)
                      -||.|+|+|+.|.+++.++.+ ++++.++..|.|++|+ ++.+++|.     .-++++|++---+    +         .
T Consensus        41 i~dtlti~Da~G~~l~~i~~k-ll~l~~~yeI~d~~g~-~~~vrKK~-----tf~Rdk~e~d~~~~eihGNi~d~efkl~  113 (159)
T COG4894          41 IGDTLTITDASGKTLVSIEQK-LLSLLPRYEISDGGGT-VCEVRKKV-----TFSRDKFEIDGLNWEIHGNIWDDEFKLT  113 (159)
T ss_pred             eCceEEEEecCCCChHHHHHH-HhhccceeEEEcCCCC-EEEEEEEE-----EEEeeeEEEcCCCeEEecceeceEEEEe
Confidence            478999999999999999996 8999999999999999 88899993     4348888872111    0         1


Q ss_pred             CCceeEEEEEcCCCCcceeecceEEEEEec
Q 041057           74 GSKKLVFTLKEPPSSSCLVRNSSIRISTET  103 (180)
Q Consensus        74 ~~~~~~ftvkk~~~~~~~~~k~~~~v~l~~  103 (180)
                      +.++..++|.|++    |..+..|.+.+++
T Consensus       114 dg~~~~aeVsKkw----f~~rdTY~l~vap  139 (159)
T COG4894         114 DGENVRAEVSKKW----FSWRDTYHLQVAP  139 (159)
T ss_pred             cCCceehhheeee----EeccceEEEEEcC
Confidence            1234555666553    5556666666654

>PF04525 Tub_2: Tubby C 2; InterPro: IPR007612 This is a family of plant and bacterial uncharacterised proteins

Probab=97.68  E-value=0.00033  Score=55.34  Aligned_cols=87  Identities=18%  Similarity=0.198  Sum_probs=48.6

Q ss_pred             CCCCEEEEEeccccCCCCCeEEEECCCCCeEEEEEE-cCceeeeecccceeEEEEecCCCCceeEEEEEcCCCCcceeec
Q 041057           16 CSQKIIFRVDGCGVLGTKGELVVRHADGDAVVLIRR-KGGVVEALSIHKKWKGYAFDYEGSKKLVFTLKEPPSSSCLVRN   94 (180)
Q Consensus        16 ~~G~~vf~V~g~~~~s~~~~~~l~D~~G~~L~~i~~-k~~~~~~~sl~~~w~v~~~~~~~~~~~~ftvkk~~~~~~~~~k   94 (180)
                      +.....++|.-+.....++.+.++|.+|++++++.. +     .+++.++..++..+    ++|+++++++.    +...
T Consensus        10 ~~~~~~l~v~~k~~~~~~~~f~V~D~~G~~vf~V~g~~-----~~s~~~~~~l~D~~----G~~L~~i~~k~----~~l~   76 (187)
T PF04525_consen   10 SPQPVTLTVKKKSLSFSGDDFTVYDENGNVVFRVDGGK-----FFSIGKKRTLMDAS----GNPLFTIRRKL----FSLR   76 (187)
T ss_dssp             -SS-EEEEEE----------EEEEETTS-EEEEEE--S-----CTTBTTEEEEE-TT----S-EEEEEE-----------
T ss_pred             CCCceEEEEEEEEeeecCCCEEEEcCCCCEEEEEEEec-----ccCCCCEEEEECCC----CCEEEEEEeee----cccc
Confidence            456788899665444568999999999999999999 7     59999999998765    46999999875    4457


Q ss_pred             ceEEEEEecCC--CcceEEEEee
Q 041057           95 SSIRISTETTA--RSSNFEVKGY  115 (180)
Q Consensus        95 ~~~~v~l~~~~--~~~~~~v~G~  115 (180)
                      +++.++.+...  +.+-++|+-.
T Consensus        77 ~~w~i~~~~~~~~~~~i~tvkk~   99 (187)
T PF04525_consen   77 PTWEIYRGGGSEGKKPIFTVKKK   99 (187)
T ss_dssp             -EEEEEETT---GGGEEEEEE--
T ss_pred             eEEEEEECCCCccCceEEEEEEe
Confidence            88888876641  1234666644

; PDB: 1ZXU_A 2Q4M_A.

>KOG0621 consensus Phospholipid scramblase [Cell wall/membrane/envelope biogenesis]

Probab=97.33  E-value=0.0064  Score=51.60  Aligned_cols=157  Identities=18%  Similarity=0.191  Sum_probs=97.1

Q ss_pred             cCCEEEEcCCCCEEEEEeccc------cC--CCCCeEEEECCCCCeEEEEEEcCceeeeecccceeEEEEe-cC------
Q 041057            8 GGGFVVTDCSQKIIFRVDGCG------VL--GTKGELVVRHADGDAVVLIRRKGGVVEALSIHKKWKGYAF-DY------   72 (180)
Q Consensus         8 gd~f~V~D~~G~~vf~V~g~~------~~--s~~~~~~l~D~~G~~L~~i~~k~~~~~~~sl~~~w~v~~~-~~------   72 (180)
                      .+.|.|.|.+|+.+|.+--.+      ..  ..+-...++|.-|+++++++|+      +.....  .+.+ ..      
T Consensus        98 ~NRY~v~~~~g~~v~~~~E~S~~~~Rq~~g~~RpF~~~i~D~~g~eVl~~~R~------~~c~~~--~c~~~~~~~~~v~  169 (292)
T KOG0621|consen   98 ANRYVVHDMYGQPLYYAMERSNVFARQYLGTHRPFAMRIMDNFGQEVLTCKRP------FPCCSS--ACALCLAQEIEIQ  169 (292)
T ss_pred             CcEEEEEcCCcChhHHHHhhchHHHHHhhccCCcceeEeecccCcEEEEEecc------cccccc--ccccccccEEEEE
Confidence            588999999999988543321      11  1344678999999999999999      333321  1111 00      


Q ss_pred             CCCceeEEEEEcCCCCcceeecceEEEEEecCCCcceEEEEee-------cCCcceE-EEcCCCCEEEEEEeeeee--ee
Q 041057           73 EGSKKLVFTLKEPPSSSCLVRNSSIRISTETTARSSNFEVKGY-------FPDRDCI-IVDPSGNIVAQIGVKKEI--QD  142 (180)
Q Consensus        73 ~~~~~~~ftvkk~~~~~~~~~k~~~~v~l~~~~~~~~~~v~G~-------~~~~~~~-I~~~~g~~VAeV~rk~~~--~~  142 (180)
                      ......+-+|.....  +  ..+++++  .+......+.|+|-       +.+..+. +....|++|++|.|+|..  .+
T Consensus       170 ~p~~~~lG~v~q~~~--~--~~~~f~i--~~~~~~~v~~v~gp~~~~~~~~~d~~f~~~~~d~~~~vg~I~k~w~g~~rE  243 (292)
T KOG0621|consen  170 SPPMGLLGKVLQTWG--C--VNPNFHL--WDRDGNLVFLVEGPRCCTFACCDDTVFFPKTTDNGRIVGSISRKWAGLVRE  243 (292)
T ss_pred             cCCCceEEEEEEeec--c--ccceEEE--EcccceeEEEEEcCceeEEEeecCcceeEEEcCCCeEEEEEeecccchhhh
Confidence            011122323322210  1  1233333  22212233556554       3344444 444668999999999975  57


Q ss_pred             eeeeeeeEEEEEeCCCCH---HHHHHHHHHhhhhcCCcC
Q 041057          143 LMESKDLYHIVVKPGIDQ---AFVVGVIATLDYIYGEST  178 (180)
Q Consensus       143 ~~~g~dty~v~V~pgvD~---ali~alvv~lD~i~~~~~  178 (180)
                      .+...|+|.|...-..|.   |+++|.++-||.+..+.+
T Consensus       244 ~fTDad~f~v~FPldLdvk~kavllga~flID~~~Fe~~  282 (292)
T KOG0621|consen  244 AFTDADTFVVHFPLDLDVKLKALLLGSTFLIDYMSFESR  282 (292)
T ss_pred             heeccceeeEecCCcCCHHHHhhhhhheeeEEEEEEecC
Confidence            888999999998877777   789999999998877665

>PF03803 Scramblase: Scramblase ; InterPro: IPR005552 Scramblase is palmitoylated and contains a potential protein kinase C phosphorylation site

Probab=96.24  E-value=0.14  Score=41.12  Aligned_cols=101  Identities=14%  Similarity=0.184  Sum_probs=64.6

Q ss_pred             CCCeEEEECCCCCeEEEEEEcCc--eeeeecccceeEEEEecCCCCceeEEEEEcCCCCccee----ecceEEEEEecCC
Q 041057           32 TKGELVVRHADGDAVVLIRRKGG--VVEALSIHKKWKGYAFDYEGSKKLVFTLKEPPSSSCLV----RNSSIRISTETTA  105 (180)
Q Consensus        32 ~~~~~~l~D~~G~~L~~i~~k~~--~~~~~sl~~~w~v~~~~~~~~~~~~ftvkk~~~~~~~~----~k~~~~v~l~~~~  105 (180)
                      ..++..|+|++|++++...+...  -+|.+.-++.+++..-|.  .++++++++|+..  +..    ....++|.-++ +
T Consensus        41 ~~N~Y~I~n~~g~~i~~~~E~s~~~~R~~~~~~R~f~~~i~D~--~g~~vl~i~Rp~~--c~~C~~~~~~~~~V~~p~-g  115 (221)
T PF03803_consen   41 TPNRYDIKNPNGQQIYYAVEESDCCSRQCCGSHRPFKMHIYDN--YGREVLTIERPFK--CCSCCPCCLQEMEVESPP-G  115 (221)
T ss_pred             cCceEEEECCCCCEEEEEEEeCcceeeeecCCCCCEEEEEEec--CCCEEEEEEcCCc--ceecccccceeEEEecCC-C
Confidence            47899999999999999988731  133444456666555443  3468999999862  321    12344443222 2


Q ss_pred             Ccce-EEEEeecCCcceEEEcCCCCEEEEEEee
Q 041057          106 RSSN-FEVKGYFPDRDCIIVDPSGNIVAQIGVK  137 (180)
Q Consensus       106 ~~~~-~~v~G~~~~~~~~I~~~~g~~VAeV~rk  137 (180)
                      .... ++=..+++...|.|+|++|+.++.|+..
T Consensus       116 ~~iG~I~q~~~~~~~~f~I~d~~~~~~~~I~gp  148 (221)
T PF03803_consen  116 NLIGSIRQPFSCCRPNFDIFDANGNPIFTIKGP  148 (221)
T ss_pred             cEEEEEEEcCcccceEEEEEECCCceEEEEeCC
Confidence            2222 2222455688899999888999999875

Scramblase exhibits Ca2+-activated phospholipid scrambling activity in vitro. There are also possible SH3 and WW binding motifs. Scramblase is involved in the redistribution of phospholipids after cell activation or injury [].

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	180
1zxu_A	217	X-Ray Structure Of Protein From Arabidopsis Thalian		2e-11

>pdb|1ZXU|A Chain A, X-Ray Structure Of Protein From Arabidopsis Thaliana At5g01750 Length = 217

Iteration: 1
 Score = 65.1 bits (157), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 82/177 (46%), Gaps = 8/177 (4%)
Query: 1   RRPHVVNGGGFVVTDCSQKIIFRVDGCGVLGTKGELVVRHADGDAVVLIRRKGGVVEALS 60
           R+   +  G FV+TD +  ++F+V    V G   + V+    G  VV +R K      +S
Sbjct: 44  RKXXSLTDGNFVITDVNGNLLFKVKE-PVFGLHDKRVLLDGSGTPVVTLREK-----XVS 97
Query: 61  IHKKWKGYAFDYEGSKKLVFTLKEPPSSSCLVRNSSIRISTETTARSSNFEVKGYFPDRD 120
            H +W+ +       + L++T+K   S   L     + +      +  +F VKG + +R 
Sbjct: 98  XHDRWQVFRGGSTDQRDLLYTVKRS-SXLQLKTKLDVFLGHNKDEKRCDFRVKGSWLERS 156
Query: 121 CII-VDPSGNIVAQIGVKKEIQDLMESKDLYHIVVKPGIDQAFVVGVIATLDYIYGE 176
           C++    S  IVAQ   K  +Q +   KD + + V P +D AF+  ++  LD +  E
Sbjct: 157 CVVYAGESDAIVAQXHRKHTVQSVFLGKDNFSVTVYPNVDYAFIASLVVILDDVNRE 213

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	180
1zxu_A	217	AT5G01750 protein; PFAM PF01167, TULP, structural	2e-35

>1zxu_A AT5G01750 protein; PFAM PF01167, TULP, structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 1.70A {Arabidopsis thaliana} SCOP: d.23.1.2 PDB: 2q4m_A Length = 217

 Score =  122 bits (307), Expect = 2e-35
 Identities = 47/178 (26%), Positives = 84/178 (47%), Gaps = 8/178 (4%)

Query: 1   RRPHVVNGGGFVVTDCSQKIIFRVDGCGVLGTKGELVVRHADGDAVVLIRRKGGVVEALS 60
           R+   +  G FV+TD +  ++F+V    V G   + V+    G  VV +R K      +S
Sbjct: 44  RKMMSLTDGNFVITDVNGNLLFKVKE-PVFGLHDKRVLLDGSGTPVVTLREK-----MVS 97

Query: 61  IHKKWKGYAFDYEGSKKLVFTLKEPPSSSCLVRNSSIRISTETTARSSNFEVKGYFPDRD 120
           +H +W+ +       + L++T+K   S   L     + +      +  +F VKG + +R 
Sbjct: 98  MHDRWQVFRGGSTDQRDLLYTVKRS-SMLQLKTKLDVFLGHNKDEKRCDFRVKGSWLERS 156

Query: 121 CIIVD-PSGNIVAQIGVKKEIQDLMESKDLYHIVVKPGIDQAFVVGVIATLDYIYGES 177
           C++    S  IVAQ+  K  +Q +   KD + + V P +D AF+  ++  LD +  E 
Sbjct: 157 CVVYAGESDAIVAQMHRKHTVQSVFLGKDNFSVTVYPNVDYAFIASLVVILDDVNRED 214

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	180
1zxu_A	217	AT5G01750 protein; PFAM PF01167, TULP, structural	100.0
1zxu_A	217	AT5G01750 protein; PFAM PF01167, TULP, structural	97.96
2fim_A	276	Tubby related protein 1; tubby filled-barrel, beta	82.28
3c5n_A	246	Tubby-related protein 1; inositol, signalling, alt	82.19

>1zxu_A AT5G01750 protein; PFAM PF01167, TULP, structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 1.70A {Arabidopsis thaliana} SCOP: d.23.1.2 PDB: 2q4m_A

Probab=100.00  E-value=1.3e-39  Score=262.41  Aligned_cols=169  Identities=27%  Similarity=0.520  Sum_probs=128.7

Q ss_pred             CcCeEEEcCCEEEEcCCCCEEEEEeccccCCCCCeEEEECCCCCeEEEEEEcCceeeeecccceeEEEEecCCCCceeEE
Q 041057            1 RRPHVVNGGGFVVTDCSQKIIFRVDGCGVLGTKGELVVRHADGDAVVLIRRKGGVVEALSIHKKWKGYAFDYEGSKKLVF   80 (180)
Q Consensus         1 ~k~l~~~gd~f~V~D~~G~~vf~V~g~~~~s~~~~~~l~D~~G~~L~~i~~k~~~~~~~sl~~~w~v~~~~~~~~~~~~f   80 (180)
                      +|+++|++++|+|+|++|+++|+|+|+ .+++++++.|+|++|++|++|++|     .++++++|++|++++.+.++++|
T Consensus        44 qk~~~~~~~~f~V~D~~G~~vf~V~~~-~~~~~~~~~l~D~~G~~l~~i~rk-----~~~~~~~~~v~~~~~~~~~~~i~  117 (217)
T 1zxu_A           44 RKMMSLTDGNFVITDVNGNLLFKVKEP-VFGLHDKRVLLDGSGTPVVTLREK-----MVSMHDRWQVFRGGSTDQRDLLY  117 (217)
T ss_dssp             CC-----CCCEEEEETTSCEEEEEECS-STTCCSEEEEECTTSCEEEEEEC-----------CEEEEEETTCCCGGGEEE
T ss_pred             EEEeEeeCCCEEEEeCCCCEEEEEEcc-ccCCCCEEEEECCCCCEEEEEEcc-----ccccCcEEEEEcCCCCCCCcEEE
Confidence            478999999999999999999999997 678999999999999999999999     58999999999988655557999


Q ss_pred             EEEcCCCCcceeecceEEEEEecC--CCcceEEEEeecCCcceEEEcCC-CCEEEEEEeeeeeeeeeeeeeeEEEEEeCC
Q 041057           81 TLKEPPSSSCLVRNSSIRISTETT--ARSSNFEVKGYFPDRDCIIVDPS-GNIVAQIGVKKEIQDLMESKDLYHIVVKPG  157 (180)
Q Consensus        81 tvkk~~~~~~~~~k~~~~v~l~~~--~~~~~~~v~G~~~~~~~~I~~~~-g~~VAeV~rk~~~~~~~~g~dty~v~V~pg  157 (180)
                      +||+++.   ++++++++|+++++  ++.++|+|+|+|++++|+|++++ |++||+|+||+++.++++++|+|.|+|+|+
T Consensus       118 ~vrk~~~---~~~~~~~~V~~~~~~~~~~~~~~I~G~~~~~~f~I~~~~~~~~Va~I~kk~~~~~~~~~~D~y~l~V~p~  194 (217)
T 1zxu_A          118 TVKRSSM---LQLKTKLDVFLGHNKDEKRCDFRVKGSWLERSCVVYAGESDAIVAQMHRKHTVQSVFLGKDNFSVTVYPN  194 (217)
T ss_dssp             EEEC----------CCEEEEETTCCC-CCCSEEEESCTTTTCCEEEETTTCCEEEEEEEC--------CBCSEEEEECTT
T ss_pred             EEEEecc---ccCCCeEEEEECCCCCCCceEEEEEEeEeCCEEEEEECCCCEEEEEEEeeeeccccccCCcEEEEEECCC
Confidence            9998842   33588899988764  23578999999999999999975 799999999988888999999999999999


Q ss_pred             CCHHHHHHHHHHhhhhcCCcC
Q 041057          158 IDQAFVVGVIATLDYIYGEST  178 (180)
Q Consensus       158 vD~ali~alvv~lD~i~~~~~  178 (180)
                      +|.+|++|+++++|+|+++++
T Consensus       195 ~D~aliialvv~iD~~~~~~~  215 (217)
T 1zxu_A          195 VDYAFIASLVVILDDVNREDR  215 (217)
T ss_dssp             SBHHHHHHHHHHHHHHHC---
T ss_pred             CCHHHHHHHHHHHHHhhhhcc
Confidence            999999999999999999875

>1zxu_A AT5G01750 protein; PFAM PF01167, TULP, structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 1.70A {Arabidopsis thaliana} SCOP: d.23.1.2 PDB: 2q4m_A

Probab=97.96  E-value=2.8e-05  Score=61.67  Aligned_cols=84  Identities=14%  Similarity=0.130  Sum_probs=55.5

Q ss_pred             cCCEEEEcCCCCEEEEEeccccCCCCCeEEEECCCCC----eEEEEEEcCceeeeecccceeEEEEecCCCCceeEEEEE
Q 041057            8 GGGFVVTDCSQKIIFRVDGCGVLGTKGELVVRHADGD----AVVLIRRKGGVVEALSIHKKWKGYAFDYEGSKKLVFTLK   83 (180)
Q Consensus         8 gd~f~V~D~~G~~vf~V~g~~~~s~~~~~~l~D~~G~----~L~~i~~k~~~~~~~sl~~~w~v~~~~~~~~~~~~ftvk   83 (180)
                      ++.+.|+|.+|++++++.-+ .++++.+..++++.+.    +|++|+++.    ++++.+.|+|+.++...+..+.++|+
T Consensus        75 ~~~~~l~D~~G~~l~~i~rk-~~~~~~~~~v~~~~~~~~~~~i~~vrk~~----~~~~~~~~~V~~~~~~~~~~~~~~I~  149 (217)
T 1zxu_A           75 HDKRVLLDGSGTPVVTLREK-MVSMHDRWQVFRGGSTDQRDLLYTVKRSS----MLQLKTKLDVFLGHNKDEKRCDFRVK  149 (217)
T ss_dssp             CSEEEEECTTSCEEEEEEC-------CEEEEEETTCCCGGGEEEEEEC-----------CCEEEEETTCCC-CCCSEEEE
T ss_pred             CCEEEEECCCCCEEEEEEcc-ccccCcEEEEEcCCCCCCCcEEEEEEEec----cccCCCeEEEEECCCCCCCceEEEEE
Confidence            46789999999999999996 6788999999998765    799999984    46789999999875433345678888


Q ss_pred             cCCCCcceeecceEEEEEe
Q 041057           84 EPPSSSCLVRNSSIRISTE  102 (180)
Q Consensus        84 k~~~~~~~~~k~~~~v~l~  102 (180)
                      .+.    +  ...++|.-.
T Consensus       150 G~~----~--~~~f~I~~~  162 (217)
T 1zxu_A          150 GSW----L--ERSCVVYAG  162 (217)
T ss_dssp             SCT----T--TTCCEEEET
T ss_pred             EeE----e--CCEEEEEEC
Confidence            764    3  445666543

>2fim_A Tubby related protein 1; tubby filled-barrel, beta-barrel, filled-beta-roll, 12-stran barrel, helix-filled-barrel, retinitis pigmentosa; HET: 3DP; 1.90A {Homo sapiens} PDB: 1s31_A*

Probab=82.28  E-value=15  Score=29.84  Aligned_cols=104  Identities=9%  Similarity=0.087  Sum_probs=56.0

Q ss_pred             CCCeEEEEEE-cCceeeeecccceeEEEEecCCCCceeEEEEEcCCCCcceeecceEEEEEecC-----CCcceEEEEee
Q 041057           42 DGDAVVLIRR-KGGVVEALSIHKKWKGYAFDYEGSKKLVFTLKEPPSSSCLVRNSSIRISTETT-----ARSSNFEVKGY  115 (180)
Q Consensus        42 ~G~~L~~i~~-k~~~~~~~sl~~~w~v~~~~~~~~~~~~ftvkk~~~~~~~~~k~~~~v~l~~~-----~~~~~~~v~G~  115 (180)
                      .|..-+.|+| |.+.  .-++.++|..|..++  .+..++..||...    +....|-|++...     ++..-=+++.|
T Consensus        36 ~~~iqC~I~R~k~g~--~~g~yp~y~L~l~~~--~~~fLLaarK~k~----~~ts~YiIS~d~~dlsr~s~~yvGKLrSN  107 (276)
T 2fim_A           36 GRTVRCRLTRDKKGM--DRGMYPSYFLHLDTE--KKVFLLAGRKRKR----SKTANYLISIDPTNLSRGGENFIGKLRSN  107 (276)
T ss_dssp             TCCEEEEEEEEC---------CCEEEEEECSS--SCEEEEEEEECTT----CSSCEEEEESCTTC------CEEEEEEEC
T ss_pred             CCeEEEEEEEeCCCC--CCCCceEEEEEEeCC--CCEEEEEEEeccC----CCCceEEEEecchhcccCCceEEEEEEEc
Confidence            3555667755 3210  013568999998642  3456767776541    1245688887653     12333467789


Q ss_pred             cCCcceEEEcCC--------------CCEEEEEEeeeeeeeeeeeeeeEEEEE
Q 041057          116 FPDRDCIIVDPS--------------GNIVAQIGVKKEIQDLMESKDLYHIVV  154 (180)
Q Consensus       116 ~~~~~~~I~~~~--------------g~~VAeV~rk~~~~~~~~g~dty~v~V  154 (180)
                      |++..|+|+|..              ...+|.|.-+.+..+. .|.-...+.+
T Consensus       108 flGtkF~iyD~G~~p~~~~s~~~~~~r~el~~V~Ye~nvlg~-~gPR~m~v~i  159 (276)
T 2fim_A          108 LLGNRFTVFDNGQNPQRGYSTNVASLRQELAAVIYETNVLGF-RGPRRMTVII  159 (276)
T ss_dssp             SSSSEEEEECSSBCGGGCTTSCGGGBCCEEEEEEEC----------CCEEEEE
T ss_pred             cCCCEEEEECCCCCcccccCcccccccEEEEEEEEEecccCC-CCCeEEEEEe
Confidence            999999999842              1668888776332111 2444555555

>3c5n_A Tubby-related protein 1; inositol, signalling, alternative splicing, disease mutation, polymorphism, retinitis pigmentosa, sensory transduction; HET: I3P; 1.80A {Homo sapiens} PDB: 1i7e_A* 1c8z_A

Probab=82.19  E-value=16  Score=29.07  Aligned_cols=87  Identities=7%  Similarity=0.063  Sum_probs=51.9

Q ss_pred             ccceeEEEEecCCCCceeEEEEEcCCCCcceeecceEEEEEecC-----CCcceEEEEeecCCcceEEEcCC--------
Q 041057           61 IHKKWKGYAFDYEGSKKLVFTLKEPPSSSCLVRNSSIRISTETT-----ARSSNFEVKGYFPDRDCIIVDPS--------  127 (180)
Q Consensus        61 l~~~w~v~~~~~~~~~~~~ftvkk~~~~~~~~~k~~~~v~l~~~-----~~~~~~~v~G~~~~~~~~I~~~~--------  127 (180)
                      +.++|..|..++  .+..+...||...    +....|-|++...     ++..-=+++.|+++..|.|+|..        
T Consensus        30 ~yp~y~l~~~~~--~~~fLlaark~~~----~~~s~YiIS~d~~dlsr~s~~yvGKLrsNf~Gt~F~iyD~g~~p~~~~s  103 (246)
T 3c5n_A           30 MYPSYFLHLDTE--KKVFLLAGRKRKR----SKTANYLISIDPTNLSRGGENFIGKLRSNLLGNRFTVFDNGQNPQRGYS  103 (246)
T ss_dssp             CCCEEEEEESSS--SCCEEEEEEECTT----CSSCEEEEESCTTC------CEEEEEEECSSSSEEEEECSCBCGGGCTT
T ss_pred             CceEEEEEEeCC--CcEEEEeeeeccC----CCCceEEEEeCccccccCCceEEEEEEEccCCCEEEEECCCCCcccccC
Confidence            568999887542  2345667776541    1245688887654     12333567789999999999842        


Q ss_pred             ------CCEEEEEEeeeeeeeeeeeeeeEEEEE
Q 041057          128 ------GNIVAQIGVKKEIQDLMESKDLYHIVV  154 (180)
Q Consensus       128 ------g~~VAeV~rk~~~~~~~~g~dty~v~V  154 (180)
                            ...+|.|.-+.+..+. .|.-...+.+
T Consensus       104 ~~~~~~r~el~~v~Ye~n~l~~-~gPR~m~v~i  135 (246)
T 3c5n_A          104 TNVASLRQELAAVIYETNVLGF-RGPRRMTVII  135 (246)
T ss_dssp             SCGGGBCCEEEEEEECCCCCC----CCCEEEEE
T ss_pred             cccccccEEEEEEEEEecccCC-CCCeEEEEEe
Confidence                  1678888776432111 2444555555

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	180
d2q4ma1	189	d.23.1.2 (A:24-212) Hypothetical protein At5g01750	2e-33

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	180
d2q4ma1	189	Hypothetical protein At5g01750 {Thale cress (Arabi	100.0
d2q4ma1	189	Hypothetical protein At5g01750 {Thale cress (Arabi	98.05