Citrus Sinensis ID: 041103

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510------

MASFHSRSSNSNGNHPASSFSLLLLFLLLASASVSASETVPKAMSQPATGNFDGGPVVPTTPLVTFLERVQEIALATFGKKDFDPKLYVDLSLKSGLSTTVTAFHKLPRNASESVSAPDFKEFLHEYFDGAGDDLVYAEPPDFVPEPDGFLPKVKNPQVRAWALEVHALWKNLSRRVSGSVLDRLEFHTLLLLPGPIVIPSSRFREVYYWDSYWVISQPPILSAMVYDIYNRTGDFDFVKKALPALLKEHQFWNSRIHKVNVQDDQGGNHTLSRYYAMWNKPRPESSTIDKAHSSKLLNASDKENTSDFTTLAITSILPIDLNIFILKMELDIASMAQIVGDNRTAESFLKTAQARKQAINSVFWNEEKGQWLDYWISNGTSSQECRRWKASNQNNNAFASNFVPIWIDLFNSDTCIVEKVRKGFQSSGLLGAAGIATSLTRSGEQCNYVAYKETGAMHEKYDVEKCRDIGGGGEYIPQTGFSWSNGAVLAFLEEFGWPEDLKIGCNWVMHCGDEL

cccccccccccccccccHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHccccccccccHHHHHHHHHHHHccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHcccHHHHHHHcHHHHHHHHHHHccccEEEcccccccccccccccccccccccccccccHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHcccccccEEEEEEcccccccHHHHHHHHcccccccccccHHHHHHccccccHHHHHHHHHHHHHccccccccccccccccccccccccccccccEEEEEEEcccccccccccccccccccccHHHHHHHHHHHcccccccccccccccccccc

cccccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEcccccccccHHHHHHHHHHHHHHcccccccccccccEcccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHccccccccccccccccccccHHHHHHcccHHHHHHHHHHHHHHHHHHHHccHHHHccccccEEEEccccEEEccccEEEEEEEcEEEEEcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHcccEEEEEccccccEEEEEEEccccccccccHHHHHHHHHHcccHcccccccccccccccccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEccccccccHHHHHccccccccccHHHHHHHHHHcccccHHHHHHHHHHHHHcccccccccccccccccccccHHHHHccccEEEEEEccccccccccccccccccccccHHHHHHHHHHHcccccccccccccccccccc

masfhsrssnsngnhpasSFSLLLLFLLLASAsvsasetvpkamsqpatgnfdggpvvpttplVTFLERVQEIALATfgkkdfdpklyvdlslksglstTVTAFhklprnasesvsapdFKEFLHEYFdgagddlvyaeppdfvpepdgflpkvknpqVRAWALEVHALWKNLSRRVSGSVLDRLEFHTllllpgpivipssrfrevyywdsywvisqppilSAMVYDIYNRTGDFDFVKKALPALLKEHQfwnsrihkvnvqddqggnhtLSRYYAmwnkprpesstidkahsskllnasdkentsdfTTLAITSILPIDLNIFILKMELDIASMAQIVGDNRTAESFLKTAQARKQAINSVFWNEEKGQWLDYWIsngtssqeCRRWKAsnqnnnafasnfVPIWIDLFNSDTCIVEKVRKGfqssgllgaaGIATSLtrsgeqcnyvayketgamhekydvekcrdiggggeyipqtgfswsngAVLAFLEefgwpedlkigcnwvmhcgdel

masfhsrssnsngnhPASSFSLLLLFLLLASASVSASETVPKAMsqpatgnfdggpVVPTTPLVTFLERVQEIALAtfgkkdfdpKLYVDLSLKSGLSTTVTAFhklprnasesvsAPDFKEFLHEYFDGAGDDLVYAEPPDFVPEPDGFLPKVKNPQVRAWALEVHALWKNLSRRVSGSVLDRLEFHTllllpgpivipssRFREVYYWDSYWVISQPPILSAMVYDIYNRTGDFDFVKKALPALLKEHQFWNSRIHkvnvqddqggnHTLSRYYAMWNKPRPESSTIDKAHSSKLLNASDKENTSDFTTLAITSILPIDLNIFILKMELDIASMAQIVGDNRTAESFLKTAQARKQAINSVFWNEEKGQWLDYWISNGTSSQECRRWKASNQNNNAFASNFVPIWIDLFNSDTCIVEKVRKGFQSSGLLGAAGIatsltrsgeqCNYVAYKetgamhekyDVEKCRDIGGGGEYIPQTGFSWSNGAVLAFLEEFGWPEDLKIGCNWVMHCGDEL

MASFHSRSSNSNGNHPassfsllllflllasasvsasETVPKAMSQPATGNFDGGPVVPTTPLVTFLERVQEIALATFGKKDFDPKLYVDLSLKSGLSTTVTAFHKLPRNASESVSAPDFKEFLHEYFDGAGDDLVYAEPPDFVPEPDGFLPKVKNPQVRAWALEVHALWKNLSRRVSGSVLDRLEFHTLLLLPGPIVIPSSRFREVYYWDSYWVISQPPILSAMVYDIYNRTGDFDFVKKALPALLKEHQFWNSRIHKVNVQDDQGGNHTLSRYYAMWNKPRPESSTIDKAHSSKLLNASDKENTSDFTTLAITSILPIDLNIFILKMELDIASMAQIVGDNRTAESFLKTAQARKQAINSVFWNEEKGQWLDYWISNGTSSQECRRWKasnqnnnafasnfVPIWIDLFNSDTCIVEKVRKGFQSSGLLGAAGIATSLTRSGEQCNYVAYKETGAMHEKYDVEKCRDIGGGGEYIPQTGFSWSNGAVLAFLEEFGWPEDLKIGCNWVMHCGDEL

*******************FSLLLLFLLLASA********************DGGPVVPTTPLVTFLERVQEIALATFGKKDFDPKLYVDLSLKSGLSTTVTAFHKL**********PDFKEFLHEYFDGAGDDLVYAEPPDFVPEPDGFLPKVKNPQVRAWALEVHALWKNLSRRVSGSVLDRLEFHTLLLLPGPIVIPSSRFREVYYWDSYWVISQPPILSAMVYDIYNRTGDFDFVKKALPALLKEHQFWNSRIHKVNVQDDQGGNHTLSRYYAMW****************************DFTTLAITSILPIDLNIFILKMELDIASMAQIVGDNRTAESFLKTAQARKQAINSVFWNEEKGQWLDYWISNGTSSQECRRWKASNQNNNAFASNFVPIWIDLFNSDTCIVEKVRKGFQSSGLLGAAGIATSLTRSGEQCNYVAYKETGAMHEKYDVEKCRDIGGGGEYIPQTGFSWSNGAVLAFLEEFGWPEDLKIGCNWVMHC****

*******************FSLLLLFLLLASASVSASETV**************GPVVPTTPLVTFLERVQEIALATFGKKDFDPKLYVDLSLKSGLSTTVTAFHKLPRN****VSAPDFKEFLHEYFDGAGDDLVYAEPPDFVPEPDGFLPKVKNPQVRAWALEVHALWKNLSRRVSGSV***LEFHTLLLLPGPIVIPSSRFREVYYWDSYWVISQPPILSAMVYDIYNRTGDFDFVKKALPALLKEHQFWNSRIHKVNVQDDQGGNHTLSRYYAMWNKPRPESSTIDKAHSSKLLNASDKENTSDFTTLAITSILPIDLNIFILKMELDIASMAQIVGDNRTAESFLKTAQARKQAINSVFWNEEKGQWLDYWISNGTSSQECRRWKASNQNNNAFASNFVPIWIDLFNSDTCIVEKVRKGFQSSGLLGAAGIATSLTRSGEQCNYVAYKETGAMHEKYDVEKCRDIGGGGEYIPQTGFSWSNGAVLAFLEEFGWPEDLKIGCNWVMHC****

***************PASSFSLLLLFLLLASAS***********SQPATGNFDGGPVVPTTPLVTFLERVQEIALATFGKKDFDPKLYVDLSLKSGLSTTVTAFHKLPRNASESVSAPDFKEFLHEYFDGAGDDLVYAEPPDFVPEPDGFLPKVKNPQVRAWALEVHALWKNLSRRVSGSVLDRLEFHTLLLLPGPIVIPSSRFREVYYWDSYWVISQPPILSAMVYDIYNRTGDFDFVKKALPALLKEHQFWNSRIHKVNVQDDQGGNHTLSRYYAMWNKPRPESSTIDKAHSSKLLNASDKENTSDFTTLAITSILPIDLNIFILKMELDIASMAQIVGDNRTAESFLKTAQARKQAINSVFWNEEKGQWLDYWISNGTSSQECRRWKASNQNNNAFASNFVPIWIDLFNSDTCIVEKVRKGFQSSGLLGAAGIATSLTRSGEQCNYVAYKETGAMHEKYDVEKCRDIGGGGEYIPQTGFSWSNGAVLAFLEEFGWPEDLKIGCNWVMHCGDEL

************GNHPASSFSLLLLFLLLASASVSASETVPKAMSQPATGNFDGGPVVPTTPLVTFLERVQEIALATFGKKDFDPKLYVDLSLKSGLSTTVTAFHKLPRNASESVSAPDFKEFLHEYFDGAGDDLVYAEPPDFVPEPDGFLPKVKNPQVRAWALEVHALWKNLSRRVSGSVLDRLEFHTLLLLPGPIVIPSSRFREVYYWDSYWVISQPPILSAMVYDIYNRTGDFDFVKKALPALLKEHQFWNSRIHKVNVQDDQGGNHTLSRYYAMWNKPRPESSTIDKAHSSKLLNASDKENTSDFTTLAITSILPIDLNIFILKMELDIASMAQIVGDNRTAESFLKTAQARKQAINSVFWNEEKGQWLDYWISNGTSSQECRRWKASNQNNNAFASNFVPIWIDLFNSDTCIVEKVRKGFQSSGLLGAAGIATSLTRSGEQCNYVAYKETGAMHEKYDVEKCRDIGGGGEYIPQTGFSWSNGAVLAFLEEFGWPEDLKIGCNWVMHC****

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iiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		516	2.2.26 [Sep-21-2011]
Q9SU50		626	Trehalase OS=Arabidopsis	yes	no	0.872	0.718	0.466	1e-132
Q9FWC1		563	Probable trehalase OS=Ory	yes	no	0.870	0.797	0.437	1e-123
P19813		578	Trehalase OS=Oryctolagus	yes	no	0.767	0.685	0.269	7e-51
O43280		583	Trehalase OS=Homo sapiens	yes	no	0.792	0.701	0.263	6e-47
P32358		579	Trehalase OS=Bombyx mori	N/A	no	0.844	0.753	0.263	1e-45
A8J4S9		626	Trehalase OS=Apis mellife	yes	no	0.798	0.658	0.265	6e-45
Q9JLT2		576	Trehalase OS=Mus musculus	yes	no	0.796	0.713	0.252	1e-42
Q9W2M2		596	Trehalase OS=Drosophila m	yes	no	0.784	0.679	0.259	5e-42
Q8MMG9		585	Trehalase OS=Pimpla hypoc	N/A	no	0.767	0.676	0.262	8e-42
P32359		555	Trehalase OS=Tenebrio mol	N/A	no	0.767	0.713	0.261	5e-41

>sp\|Q9SU50\|TRE1_ARATH Trehalase OS=Arabidopsis thaliana GN=TRE1 PE=2 SV=1	Back alignment and function desciption

 Score =  472 bits (1214), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 260/557 (46%), Positives = 334/557 (59%), Gaps = 107/557 (19%)

Query: 53  DGGPVVPTTPLVTFLERVQEIALATFGKKDF-DPKLYVDLSLKS--GLSTTVTAFHKLPR 109
           D GPVV TT LVTFL+RVQ  AL ++ KK   DPK Y+DLSLK    LST  +AF  L  
Sbjct: 70  DSGPVVATTKLVTFLQRVQHTALRSYPKKQTPDPKSYIDLSLKRPYSLSTIESAFDDLTS 129

Query: 110 NASES-VSAPDFKEFLHEYFDGAGDDLVYAEPPDFVPEPDGFLPKVKNPQVRAWALEVHA 168
            + +  V     ++F+ EYFDGAG+DL++ EP DFV +P GFL  V+N +VR WA EVH 
Sbjct: 130 ESHDQPVPVETLEKFVKEYFDGAGEDLLHHEPVDFVSDPSGFLSNVENEEVREWAREVHG 189

Query: 169 LWKNLSRRVSGSVLDRLEFHTLLLLPGPIVIPSSRFREVYYWDSYWVI------------ 216
           LW+NLS RVS SV +  + HTLL LP P++IP SRFREVYYWDSYWVI            
Sbjct: 190 LWRNLSCRVSDSVRESADRHTLLPLPEPVIIPGSRFREVYYWDSYWVIKGLMTSQMFTTA 249

Query: 217 ----------------------------SQPPILSAMVYDIYNRTGDFDFVKKALPALLK 248
                                       SQPP+LS+MVY+IYN T D + V+KA+P LLK
Sbjct: 250 KGLVTNLMSLVETYGYALNGARAYYTNRSQPPLLSSMVYEIYNVTKDEELVRKAIPLLLK 309

Query: 249 EHQFWNSRIHKVNVQDDQGGNHTLSRYYAMWNKPRPESSTIDKAHSSKLLNASDKE---- 304
           E++FWNS  HKV ++D  G +H LSRYYAMWNKPRPESS  D+  +S      +K+    
Sbjct: 310 EYEFWNSGKHKVVIRDANGYDHVLSRYYAMWNKPRPESSVFDEESASGFSTMLEKQRFHR 369

Query: 305 ------------------NTSDFTTLAITSILPIDLNIFILKMELDIASMAQIVGDNRTA 346
                             +  +FTT+A TS++P+DLN+F+LKMELDIA M ++ GD   +
Sbjct: 370 DIATAAESGCDFSTRWMRDPPNFTTMATTSVVPVDLNVFLLKMELDIAFMMKVSGDQNGS 429

Query: 347 ESFLKTAQARKQAINSVFWNEEKGQWLDYWISNGTSSQECRRWKASNQNNNAFASNFVPI 406
           + F+K ++AR++A  +VFWNE+ GQWLDYW+S  +S +E   WKA NQN N FASNF PI
Sbjct: 430 DRFVKASKAREKAFQTVFWNEKAGQWLDYWLS--SSGEESETWKAENQNTNVFASNFAPI 487

Query: 407 WIDLFNSDTCIVEKVRKGFQSSGLLGAAGIATSLTRSGEQ-------------------- 446
           WI+  NSD  +V+KV    ++SGL+  AGI TSLT SG+Q                    
Sbjct: 488 WINSINSDENLVKKVVTALKNSGLIAPAGILTSLTNSGQQWDSPNGWAPQQEMIVTGLGR 547

Query: 447 -------------------CNYVAYKETGAMHEKYDVEKCRDIGGGGEYIPQTGFSWSNG 487
                               NY+ YK++G +HEK  V +  + GGGGEY+PQTGF WSNG
Sbjct: 548 SSVKEAKEMAEDIARRWIKSNYLVYKKSGTIHEKLKVTELGEYGGGGEYMPQTGFGWSNG 607

Query: 488 AVLAFLEEFGWPEDLKI 504
            +LAFLEE+GWP  L I
Sbjct: 608 VILAFLEEYGWPSHLSI 624

Involved in the regulation of trehalose content by hydrolyzing trehalose to glucose.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 2EC: 8

>sp\|Q9FWC1\|TRE_ORYSJ Probable trehalase OS=Oryza sativa subsp. japonica GN=Os10g0521000 PE=2 SV=1	Back alignment and function description

>sp\|P19813\|TREA_RABIT Trehalase OS=Oryctolagus cuniculus GN=TREH PE=1 SV=1	Back alignment and function description

>sp\|O43280\|TREA_HUMAN Trehalase OS=Homo sapiens GN=TREH PE=1 SV=2	Back alignment and function description

>sp\|P32358\|TREA_BOMMO Trehalase OS=Bombyx mori PE=1 SV=1	Back alignment and function description

>sp\|A8J4S9\|TREA_APIME Trehalase OS=Apis mellifera PE=1 SV=1	Back alignment and function description

>sp\|Q9JLT2\|TREA_MOUSE Trehalase OS=Mus musculus GN=Treh PE=2 SV=1	Back alignment and function description

>sp\|Q9W2M2\|TREA_DROME Trehalase OS=Drosophila melanogaster GN=Treh PE=1 SV=1	Back alignment and function description

>sp\|Q8MMG9\|TREA_PIMHY Trehalase OS=Pimpla hypochondriaca GN=tre1 PE=1 SV=1	Back alignment and function description

>sp\|P32359\|TREA_TENMO Trehalase OS=Tenebrio molitor PE=2 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		516
224072254		568	predicted protein [Populus trichocarpa]	0.877	0.797	0.583	1e-179
224072252		568	predicted protein [Populus trichocarpa]	0.872	0.792	0.567	1e-172
225426222		565	PREDICTED: trehalase [Vitis vinifera]	0.875	0.8	0.555	1e-170
255555679		567	alpha,alpha-trehalase, putative [Ricinus	0.874	0.795	0.545	1e-167
255564838		566	alpha,alpha-trehalase, putative [Ricinus	0.870	0.793	0.543	1e-166
351723307		557	trehalase 1 GMTRE1 [Glycine max] gi\|4559	0.868	0.804	0.513	1e-158
297742400		544	unnamed protein product [Vitis vinifera]	0.835	0.792	0.523	1e-155
283131196		580	trehalase [Nicotiana tabacum]	0.918	0.817	0.488	1e-152
224058081		565	predicted protein [Populus trichocarpa]	0.844	0.771	0.522	1e-152
449452238		577	PREDICTED: probable trehalase-like [Cucu	0.875	0.783	0.502	1e-150

>gi\|224072254\|ref\|XP_002303675.1\| predicted protein [Populus trichocarpa] gi\|222841107\|gb\|EEE78654.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

 Score =  635 bits (1639), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 324/555 (58%), Positives = 373/555 (67%), Gaps = 102/555 (18%)

Query: 54  GGPVVPTTPLVTFLERVQEIALATFGKKDFDPKLYVDLSLKSGLSTTVTAFHKLPRNASE 113
           GGPVV TTPLVTFLERVQE AL TFG++DFDPKLYVDLSLK  LS T  AF +LPR+   
Sbjct: 14  GGPVVATTPLVTFLERVQETALGTFGEEDFDPKLYVDLSLKFNLSKTQKAFDELPRSGEN 73

Query: 114 -SVSAPDFKEFLHEYFDGAGDDLVYAEPPDFVPEPDGFLPKVKNPQVRAWALEVHALWKN 172
            +VS  D K F+  YFD A DDLVY +P DFVPEP+GFLPKVKNP+VR+WALEVHALWKN
Sbjct: 74  GTVSVEDLKVFIATYFDDAADDLVYYDPVDFVPEPEGFLPKVKNPEVRSWALEVHALWKN 133

Query: 173 LSRRVSGSVLDRLEFHTLLLLPGPIVIPSSRFREVYYWDSYWVI---------------- 216
           LSR+VS  VL+  E HTLL LP  +V+P SRFREVYYWDSYWVI                
Sbjct: 134 LSRKVSDGVLEHSELHTLLPLPEAVVVPGSRFREVYYWDSYWVIRGLMASKMYETAKAIV 193

Query: 217 ------------------------SQPPILSAMVYDIYNRTGDFDFVKKALPALLKEHQF 252
                                   SQPP+LSAMVY+IYNRT D + V+KALPALLKEH F
Sbjct: 194 TNLIFLVDTYGYVLNGARAYYTNRSQPPLLSAMVYEIYNRTCDVELVRKALPALLKEHAF 253

Query: 253 WNSRIHKVNVQDDQGGNHTLSRYYAMWNKPRPESSTIDKAHSSKLLNASDKE-------- 304
           WNS IHKV +QD QG NH LSRYYA+WNKPRPESSTIDK  +SK    S+K+        
Sbjct: 254 WNSEIHKVTIQDAQGFNHNLSRYYAIWNKPRPESSTIDKESASKFFGNSEKQQFYRDVAS 313

Query: 305 --------------NTSDFTTLAITSILPIDLNIFILKMELDIASMAQIVGDNRTAESFL 350
                         NTS+FTTL+ TSILP+DLN++ILKMELDIA +A+I+G+  T ESF+
Sbjct: 314 AAESGWDFSTRWMRNTSEFTTLSTTSILPVDLNVYILKMELDIAFLAKILGNKSTMESFM 373

Query: 351 KTAQARKQAINSVFWNEEKGQWLDYWISNGTSSQECRRWKASNQNNNAFASNFVPIWIDL 410
           + A+ARK AINSVFW+ EKGQWLDY ++NGT  +E   W+A NQN NA+ASNF+P+WIDL
Sbjct: 374 EVAEARKNAINSVFWDAEKGQWLDYRLTNGTICKESETWQACNQNQNAYASNFIPLWIDL 433

Query: 411 FNSDTCIVEKVRKGFQSSGLLGAAGIATSLTRSGEQ------------------------ 446
           F+SDT +VE V + FQSSGL+ AAGIATSL  SG+Q                        
Sbjct: 434 FHSDTALVENVMRSFQSSGLVHAAGIATSLINSGQQWDFPNGWAPLQHMIVEGLLRSGLK 493

Query: 447 ---------------CNYVAYKETGAMHEKYDVEKCRDIGGGGEYIPQTGFSWSNGAVLA 491
                           NYV YK+TGAMHEKYDV KC   GGGGEYIPQTGF WSNG VL 
Sbjct: 494 EARSLAEDIAVRWIKTNYVGYKKTGAMHEKYDVRKCGAFGGGGEYIPQTGFGWSNGVVLT 553

Query: 492 FLEEFGWPEDLKIGC 506
           FLEEFGWPED  IGC
Sbjct: 554 FLEEFGWPEDRSIGC 568

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|224072252\|ref\|XP_002303674.1\| predicted protein [Populus trichocarpa] gi\|222841106\|gb\|EEE78653.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|225426222\|ref\|XP_002263698.1\| PREDICTED: trehalase [Vitis vinifera]	Back alignment and taxonomy information

>gi\|255555679\|ref\|XP_002518875.1\| alpha,alpha-trehalase, putative [Ricinus communis] gi\|223541862\|gb\|EEF43408.1\| alpha,alpha-trehalase, putative [Ricinus communis]	Back alignment and taxonomy information

>gi\|255564838\|ref\|XP_002523413.1\| alpha,alpha-trehalase, putative [Ricinus communis] gi\|223537363\|gb\|EEF38992.1\| alpha,alpha-trehalase, putative [Ricinus communis]	Back alignment and taxonomy information

>gi\|351723307\|ref\|NP_001238042.1\| trehalase 1 GMTRE1 [Glycine max] gi\|4559292\|gb\|AAD22970.1\|AF124148_1 trehalase 1 GMTRE1 [Glycine max]	Back alignment and taxonomy information

>gi\|297742400\|emb\|CBI34549.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|283131196\|dbj\|BAI63261.1\| trehalase [Nicotiana tabacum]	Back alignment and taxonomy information

>gi\|224058081\|ref\|XP_002299445.1\| predicted protein [Populus trichocarpa] gi\|222846703\|gb\|EEE84250.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|449452238\|ref\|XP_004143867.1\| PREDICTED: probable trehalase-like [Cucumis sativus] gi\|449519649\|ref\|XP_004166847.1\| PREDICTED: probable trehalase-like [Cucumis sativus]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		516
TAIR\|locus:2134961		626	TRE1 "trehalase 1" [Arabidopsi	0.317	0.261	0.577	2.1e-95
ZFIN\|ZDB-GENE-070912-84		583	treh "trehalase (brush-border	0.257	0.228	0.385	5e-53
WB\|WBGene00006609		608	tre-3 [Caenorhabditis elegans	0.279	0.236	0.317	6.9e-48
FB\|FBgn0003748		596	Treh "Trehalase" [Drosophila m	0.275	0.238	0.310	2e-43
WB\|WBGene00006607		567	tre-1 [Caenorhabditis elegans	0.25	0.227	0.383	3.9e-40
DICTYBASE\|DDB_G0283473		594	treh "alpha,alpha-trehalase" [	0.265	0.230	0.349	4e-36
UNIPROTKB\|E9PNA2		546	TREH "Trehalase" [Homo sapiens	0.418	0.395	0.320	3.1e-35
UNIPROTKB\|B7WPJ2		551	TREH "Trehalase" [Homo sapiens	0.418	0.392	0.320	3.3e-35
UNIPROTKB\|I3LIR5		561	TREH "Uncharacterized protein"	0.325	0.299	0.322	3.3e-33
UNIPROTKB\|E9PLW7		577	TREH "Trehalase" [Homo sapiens	0.300	0.268	0.341	5.9e-31

TAIR\|locus:2134961 TRE1 "trehalase 1" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 479 (173.7 bits), Expect = 2.1e-95, Sum P(3) = 2.1e-95
 Identities = 97/168 (57%), Positives = 118/168 (70%)

Query:    53 DGGPVVPTTPLVTFLERVQEIALATFGKKDF-DPKLYVDLSLKS--GLSTTVTAFHKLPR 109
             D GPVV TT LVTFL+RVQ  AL ++ KK   DPK Y+DLSLK    LST  +AF  L  
Sbjct:    70 DSGPVVATTKLVTFLQRVQHTALRSYPKKQTPDPKSYIDLSLKRPYSLSTIESAFDDLTS 129

Query:   110 NASES-VSAPDFKEFLHEYFDGAGDDLVYAEPPDFVPEPDGFLPKVKNPQVRAWALEVHA 168
              + +  V     ++F+ EYFDGAG+DL++ EP DFV +P GFL  V+N +VR WA EVH 
Sbjct:   130 ESHDQPVPVETLEKFVKEYFDGAGEDLLHHEPVDFVSDPSGFLSNVENEEVREWAREVHG 189

Query:   169 LWKNLSRRVSGSVLDRLEFHTLLLLPGPIVIPSSRFREVYYWDSYWVI 216
             LW+NLS RVS SV +  + HTLL LP P++IP SRFREVYYWDSYWVI
Sbjct:   190 LWRNLSCRVSDSVRESADRHTLLPLPEPVIIPGSRFREVYYWDSYWVI 237

GO:0003824 "catalytic activity" evidence=IEA

GO:0004555 "alpha,alpha-trehalase activity" evidence=IEA;IDA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0005991 "trehalose metabolic process" evidence=IEA

GO:0015927 "trehalase activity" evidence=ISS

GO:0005993 "trehalose catabolic process" evidence=IDA

ZFIN\|ZDB-GENE-070912-84 treh "trehalase (brush-border membrane glycoprotein)" [Danio rerio (taxid:7955)]	Back alignment and assigned GO terms

WB\|WBGene00006609 tre-3 [Caenorhabditis elegans (taxid:6239)]	Back alignment and assigned GO terms

FB\|FBgn0003748 Treh "Trehalase" [Drosophila melanogaster (taxid:7227)]	Back alignment and assigned GO terms

WB\|WBGene00006607 tre-1 [Caenorhabditis elegans (taxid:6239)]	Back alignment and assigned GO terms

DICTYBASE\|DDB_G0283473 treh "alpha,alpha-trehalase" [Dictyostelium discoideum (taxid:44689)]	Back alignment and assigned GO terms

UNIPROTKB\|E9PNA2 TREH "Trehalase" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

UNIPROTKB\|B7WPJ2 TREH "Trehalase" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

UNIPROTKB\|I3LIR5 TREH "Uncharacterized protein" [Sus scrofa (taxid:9823)]	Back alignment and assigned GO terms

UNIPROTKB\|E9PLW7 TREH "Trehalase" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.2.1.28	LOW CONFIDENCE prediction!
3rd Layer	3.2.1	LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		516
PLN02567		554	PLN02567, PLN02567, alpha,alpha-trehalase	0.0
pfam01204		509	pfam01204, Trehalase, Trehalase	1e-130
COG1626		558	COG1626, TreA, Neutral trehalase [Carbohydrate tra	5e-42
PRK13271		569	PRK13271, treA, trehalase; Provisional	8e-33
PRK13270		549	PRK13270, treF, trehalase; Provisional	3e-32
PRK13272		542	PRK13272, treA, trehalase; Provisional	7e-28

>gnl\|CDD\|215307 PLN02567, PLN02567, alpha,alpha-trehalase	Back alignment and domain information

 Score =  684 bits (1767), Expect = 0.0
 Identities = 286/554 (51%), Positives = 342/554 (61%), Gaps = 104/554 (18%)

Query: 57  VVPTTPLVTFLERVQEIALATFGKKD-FDPKLYVDLSLKSGLSTTVTAFHKLPR-NASES 114
           VVPTTPL+TFL RVQ  ALA+FG +D FDPKLYVDL LK  LS T  AF  LPR N + S
Sbjct: 1   VVPTTPLLTFLVRVQSTALASFGGEDTFDPKLYVDLPLKFSLSETEKAFDALPRSNINGS 60

Query: 115 VSAPDFKEFLHEYFDGAGDDLVYAEPPDFVPEPDGFLPKVKNPQVRAWALEVHALWKNLS 174
           V   + +EF+ EYFD AG DL+   PPDFVPEP GFLPKV+NP+ R WAL+VH+LWKNL+
Sbjct: 61  VPVEELEEFVAEYFDVAGSDLLPYTPPDFVPEPPGFLPKVENPEAREWALKVHSLWKNLA 120

Query: 175 RRVSGSVLDRLEFHTLLLLPGPIVIPSSRFREVYYWDSYWVI------------------ 216
           R+VS SV +R + HTLL LP P+V+P SRFREVYYWDSYWVI                  
Sbjct: 121 RKVSDSVEERPDRHTLLPLPNPVVVPGSRFREVYYWDSYWVIRGLLASKMYETAKGVVEN 180

Query: 217 ----------------------SQPPILSAMVYDIYNRTGDFDFVKKALPALLKEHQFWN 254
                                 SQPP+LSAMV  +Y  T D + V++ALPALLKEH FW 
Sbjct: 181 LLYLVDTYGFVPNGARAYYTNRSQPPLLSAMVLAVYAATKDVELVRRALPALLKEHAFWT 240

Query: 255 SRIHKVNVQDDQGGNHTLSRYYAMWNKPRPESSTIDKAHSSKLLNASDK----------- 303
           S  H V ++D  G  H LSRYYAMW+KPRPESS IDK  +SK  ++S+K           
Sbjct: 241 SGRHTVTIRDANGVVHVLSRYYAMWDKPRPESSRIDKEVASKFSSSSEKQQLYRDIASAA 300

Query: 304 -----------ENTSDFTTLAITSILPIDLNIFILKMELDIASMAQIVGDNRTAESFLKT 352
                       + S+ TTL  TSILP+DLN F+LKMELDIA  A+++GD  TAE FLK 
Sbjct: 301 ESGWDFSSRWMRDGSNLTTLRTTSILPVDLNAFLLKMELDIAFFAKLLGDKATAERFLKA 360

Query: 353 AQARKQAINSVFWNEEKGQWLDYWISNGTSS-QECRRWKASNQNNNAFASNFVPIWIDLF 411
           A+ARK+AIN+V WNEE GQWLDYW+    ++ QE   W A NQN N +ASNFVP+W  + 
Sbjct: 361 AKARKRAINAVLWNEEMGQWLDYWLPPNGATCQESYTWDAENQNTNVYASNFVPLWCGVV 420

Query: 412 NSDTCIVEKVRKGFQSSGLLGAAGIATSLTRSGEQ------------------------- 446
                 VEKV +  +SSGL+  AGIATSL  +G+Q                         
Sbjct: 421 PPGDAKVEKVVESLKSSGLVLPAGIATSLRNTGQQWDFPNAWAPLQHMIVEGLAASGSKE 480

Query: 447 --------------CNYVAYKETGAMHEKYDVEKCRDIGGGGEYIPQTGFSWSNGAVLAF 492
                          NYVAYK+TGAMHEKYD   C ++GGGGEYIPQTGF WSNG VL+ 
Sbjct: 481 GKALAEDIARRWLRSNYVAYKKTGAMHEKYDARYCGEVGGGGEYIPQTGFGWSNGVVLSL 540

Query: 493 LEEFGWPEDLKIGC 506
           LEEFGWPED K+ C
Sbjct: 541 LEEFGWPEDKKLDC 554

Length = 554

>gnl\|CDD\|216362 pfam01204, Trehalase, Trehalase	Back alignment and domain information

>gnl\|CDD\|224541 COG1626, TreA, Neutral trehalase [Carbohydrate transport and metabolism]	Back alignment and domain information

>gnl\|CDD\|237326 PRK13271, treA, trehalase; Provisional	Back alignment and domain information

>gnl\|CDD\|183934 PRK13270, treF, trehalase; Provisional	Back alignment and domain information

>gnl\|CDD\|183936 PRK13272, treA, trehalase; Provisional	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		516
PLN02567		554	alpha,alpha-trehalase	100.0
PRK13272		542	treA trehalase; Provisional	100.0
PRK13271		569	treA trehalase; Provisional	100.0
PRK13270		549	treF trehalase; Provisional	100.0
PF01204		512	Trehalase: Trehalase; InterPro: IPR001661 O-Glycos	100.0
KOG0602		600	consensus Neutral trehalase [Carbohydrate transpor	100.0
COG1626		558	TreA Neutral trehalase [Carbohydrate transport and	100.0
PRK10137		786	alpha-glucosidase; Provisional	100.0
PF03200		801	Glyco_hydro_63: Mannosyl oligosaccharide glucosida	99.94
KOG2161		849	consensus Glucosidase I [Carbohydrate transport an	99.88
PF06202		370	GDE_C: Amylo-alpha-1,6-glucosidase ; InterPro: IPR	99.47
TIGR01561		575	gde_arch glycogen debranching enzyme, archaeal typ	99.32
COG3408		641	GDB1 Glycogen debranching enzyme [Carbohydrate tra	99.04
PF05592		509	Bac_rhamnosid: Bacterial alpha-L-rhamnosidase; Int	99.01
PF04685		365	DUF608: Protein of unknown function, DUF608; Inter	98.54
TIGR01577		616	oligosac_amyl oligosaccharide amylase. The name of	98.03
TIGR01531		1464	glyc_debranch glycogen debranching enzymye. glycog	97.7
COG4354		721	Predicted bile acid beta-glucosidase [Carbohydrate	95.71
PF06824		424	DUF1237: Protein of unknown function (DUF1237); In	94.86
COG3387		612	SGA1 Glucoamylase and related glycosyl hydrolases	94.0
TIGR01535		648	glucan_glucosid glucan 1,4-alpha-glucosidase. Gluc	93.49
COG3459		1056	Cellobiose phosphorylase [Carbohydrate transport a	89.61
KOG2119		879	consensus Predicted bile acid beta-glucosidase [Ca	87.86
COG3538		434	Uncharacterized conserved protein [Function unknow	86.45
PLN03005		550	beta-fructofuranosidase	80.53

>PLN02567 alpha,alpha-trehalase	Back alignment and domain information

Probab=100.00  E-value=6.9e-125  Score=1022.49  Aligned_cols=450  Identities=63%  Similarity=1.081  Sum_probs=419.9

Q ss_pred             CCCCCCchhhHHhhchhHHhhhhcCCC-CCCCcCCCCCCCCHHHHHHHHhcCCccC-CCCCChHHHHHHHHhhcCCCCCC
Q 041103           57 VVPTTPLVTFLERVQEIALATFGKKDF-DPKLYVDLSLKSGLSTTVTAFHKLPRNA-SESVSAPDFKEFLHEYFDGAGDD  134 (516)
Q Consensus        57 ~~~~~~~~~~~~~~~g~ll~~vq~~~f-DsKtFvD~~~k~~~~~il~~f~~l~~~~-~~~~~~~~l~~Fv~~~F~~~g~e  134 (516)
                      +.+++++.+||+||||++|++||+++| ||||||||+||++|++||++|++++... ++++++++|++||++||+.||.|
T Consensus         1 ~~~~~~~~~~~~~~~~~~l~~v~~~~f~DsKtfvD~~~~~~~~~~l~~f~~~~~~~~~~~~~~~~l~~Fv~~~F~~~g~~   80 (554)
T PLN02567          1 VVPTTPLLTFLVRVQSTALASFGGEDTFDPKLYVDLPLKFSLSETEKAFDALPRSNINGSVPVEELEEFVAEYFDVAGSD   80 (554)
T ss_pred             CCCccchHHHHHHHHHHHHhhhcccCCCCCCccCCCCCCCCHHHHHHHHHHHhhcccCCCCCHHHHHHHHHHhCCCCCcc
Confidence            357899999999999999999999998 9999999999999999999999998655 56789999999999999999999


Q ss_pred             cccCCCCCCCCCCCCcCCCCCChhHHHHHHHHHHhhhccccccccccccCCCccccccCCCCcccCCCCCcceeeccccc
Q 041103          135 LVYAEPPDFVPEPDGFLPKVKNPQVRAWALEVHALWKNLSRRVSGSVLDRLEFHTLLLLPGPIVIPSSRFREVYYWDSYW  214 (516)
Q Consensus       135 l~~~~p~d~~~~p~~~l~~i~d~~~r~~a~~i~~lW~~L~R~~~~~v~~~p~~~sli~lp~pfiVPGGRFrE~YYWDSYf  214 (516)
                      |+.|+|+||+++|+.||++|+|+++|+||++||+||+.|+|+++++|.++|+++||||||||||||||||||+|||||||
T Consensus        81 l~~~~~~d~~~~p~~~l~~i~~~~~r~~a~~i~~lW~~L~R~~~~~v~~~~~~~sli~lp~p~iVPGgRFrE~yyWDSy~  160 (554)
T PLN02567         81 LLPYTPPDFVPEPPGFLPKVENPEAREWALKVHSLWKNLARKVSDSVEERPDRHTLLPLPNPVVVPGSRFREVYYWDSYW  160 (554)
T ss_pred             cccCCccccccCcHhHhhhcCChHHHHHHHHHHHHHHHhccccCcccccCCCcCCcccCCCCeEccCCCcCccchHHHHH
Confidence            99999999999997799999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cc----------------------------------------cCCchHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHH
Q 041103          215 VI----------------------------------------SQPPILSAMVYDIYNRTGDFDFVKKALPALLKEHQFWN  254 (516)
Q Consensus       215 i~----------------------------------------SQPPlla~mV~~~y~~t~D~~fL~~~lP~L~kEy~fW~  254 (516)
                      |+                                        ||||||++||.+||++|+|++||++++|+|+|||+|||
T Consensus       161 i~~GLl~s~~~~~A~~mi~Nf~~~i~~~GfIPNg~R~Yyl~RSQPPlla~mV~~~~~~t~d~~~l~~~lp~L~~E~~~W~  240 (554)
T PLN02567        161 VIRGLLASKMYETAKGVVENLLYLVDTYGFVPNGARAYYTNRSQPPLLSAMVLAVYAATKDVELVRRALPALLKEHAFWT  240 (554)
T ss_pred             HHHHHHhCCCHHHHHHHHHHHHHHHHHcCcCCCCCcccccCCCCcHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHh
Confidence            99                                        99999999999999999999999999999999999999


Q ss_pred             hcCccccccCCCCCeeeeEeeecCCCCCCCCCcchhhhhhcccCCcccc----------------------cCCCCCCcc
Q 041103          255 SRIHKVNVQDDQGGNHTLSRYYAMWNKPRPESSTIDKAHSSKLLNASDK----------------------ENTSDFTTL  312 (516)
Q Consensus       255 ~~R~~v~~~~~~G~~~~L~rY~~~~~~PRPESyreD~~~A~~~~~~~ek----------------------~d~~~l~si  312 (516)
                      ++|+.|.+.+.+|..++|+||++...+|||||||+|+++|.+.++..++                      +++.+|++|
T Consensus       241 ~~~~~v~i~~~~g~~~~L~rY~~~~~~PrpEsyreD~~~a~~~~~~~~~~~~y~~l~a~aESGwDfSsRw~~~~~~l~ti  320 (554)
T PLN02567        241 SGRHTVTIRDANGVVHVLSRYYAMWDKPRPESSRIDKEVASKFSSSSEKQQLYRDIASAAESGWDFSSRWMRDGSNLTTL  320 (554)
T ss_pred             cCCcceeeecCCCCcCCCcccccCCCCCCCccccccHHHHhcCCCchHHHHHHHHHHHHHHcCCCchhhhcccccccccc
Confidence            9988777777778878899999999999999999999998776442221                      355668899


Q ss_pred             ccccccchhHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhcccCCCCeEEeeeccCCccc-chhhhhcc
Q 041103          313 AITSILPIDLNIFILKMELDIASMAQIVGDNRTAESFLKTAQARKQAINSVFWNEEKGQWLDYWISNGTSS-QECRRWKA  391 (516)
Q Consensus       313 ~t~~iiPVDLNAlLy~~e~~LA~la~~lG~~~~A~~~~~~A~~rk~aIn~~lWDee~G~y~Dydl~~~~~~-~~~y~~~~  391 (516)
                      +|++|+|||||||||+++++||+|++++|+.+++++|+++|++|+++|+++|||+++|+|+|||+++++.+ ..++.|+.
T Consensus       321 ~t~~i~pVDLNa~L~~~e~~LA~la~~lG~~~~a~~~~~~A~~~~~aI~~~lWdee~G~y~Dydl~~~~~~~~~~~~~~~  400 (554)
T PLN02567        321 RTTSILPVDLNAFLLKMELDIAFFAKLLGDKATAERFLKAAKARKRAINAVLWNEEMGQWLDYWLPPNGATCQESYTWDA  400 (554)
T ss_pred             ccccccCccHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhcCcccCeEEeeccccccccccccccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999987532 23456666


Q ss_pred             cCCCCccchhhHHHHhhcCCCCchHHHHHHHhhhhhcCCcccceeeeccCCChhh-------------------------
Q 041103          392 SNQNNNAFASNFVPIWIDLFNSDTCIVEKVRKGFQSSGLLGAAGIATSLTRSGEQ-------------------------  446 (516)
Q Consensus       392 ~~~~~~~~~s~~~PLwagia~~~~~~a~~vl~~L~~~~ll~~gGIpTsl~~sgqQ-------------------------  446 (516)
                      ..+++.+++|+|+|||+|++++++.++.+++++|++++++.+||||||+.+||||                         
T Consensus       401 ~~~~~~~~~s~f~PLw~g~~~~~~~~a~~v~~~l~~~~l~~pgGiptsl~~sg~qWdgPn~W~pl~~l~i~GL~~yG~~e  480 (554)
T PLN02567        401 ENQNTNVYASNFVPLWCGVVPPGDAKVEKVVESLKSSGLVLPAGIATSLRNTGQQWDFPNAWAPLQHMIVEGLAASGSKE  480 (554)
T ss_pred             cccccCccHHHHHHHHcCCCChhhHHHHHHHHHHHhccCccCCcccCCCCCccccCCCCCcCHhHHHHHHHHHHHcCChH
Confidence            6778899999999999999998666789999999888888999999999999998                         


Q ss_pred             --------------HHHHHHHHhCcccccccccccccCCCCCccCCCCCccccHHHHHHHHHHcCCCCCCCCCC
Q 041103          447 --------------CNYVAYKETGAMHEKYDVEKCRDIGGGGEYIPQTGFSWSNGAVLAFLEEFGWPEDLKIGC  506 (516)
Q Consensus       447 --------------~n~~~y~~tG~m~EKYdv~~~g~~GgGGEY~~Q~GFGWTNGV~L~ll~~yg~~~~~~~~c  506 (516)
                                    +|+.+|.++|.|+|||||.+++..||||||++|+||||||||+|+|+++||++.+++|+|
T Consensus       481 a~~lA~~la~rwl~~~~~~~~~tg~m~EkYd~~~~~~~GgGGey~~q~GFGWTngV~L~ll~~yg~~~~~~~~~  554 (554)
T PLN02567        481 GKALAEDIARRWLRSNYVAYKKTGAMHEKYDARYCGEVGGGGEYIPQTGFGWSNGVVLSLLEEFGWPEDKKLDC  554 (554)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCceEEeECCCCccccCCCCCCCCCCCcChHHHHHHHHHHHhCCcccCCCCC
Confidence                          577889999999999999999889999999999999999999999999999999999999

>PRK13272 treA trehalase; Provisional	Back alignment and domain information

>PRK13271 treA trehalase; Provisional	Back alignment and domain information

>PRK13270 treF trehalase; Provisional	Back alignment and domain information

>PF01204 Trehalase: Trehalase; InterPro: IPR001661 O-Glycosyl hydrolases 3	Back alignment and domain information

>KOG0602 consensus Neutral trehalase [Carbohydrate transport and metabolism]	Back alignment and domain information

>COG1626 TreA Neutral trehalase [Carbohydrate transport and metabolism]	Back alignment and domain information

>PRK10137 alpha-glucosidase; Provisional	Back alignment and domain information

>PF03200 Glyco_hydro_63: Mannosyl oligosaccharide glucosidase; InterPro: IPR004888 O-Glycosyl hydrolases 3	Back alignment and domain information

>KOG2161 consensus Glucosidase I [Carbohydrate transport and metabolism]	Back alignment and domain information

>PF06202 GDE_C: Amylo-alpha-1,6-glucosidase ; InterPro: IPR010401 This family includes human glycogen branching enzyme P35573 from SWISSPROT	Back alignment and domain information

>TIGR01561 gde_arch glycogen debranching enzyme, archaeal type, putative	Back alignment and domain information

>COG3408 GDB1 Glycogen debranching enzyme [Carbohydrate transport and metabolism]	Back alignment and domain information

>PF05592 Bac_rhamnosid: Bacterial alpha-L-rhamnosidase; InterPro: IPR008902 This entry consists of bacterial rhamnosidase A and B enzymes	Back alignment and domain information

>PF04685 DUF608: Protein of unknown function, DUF608; InterPro: IPR006775 This domain is found in non-lysosomal glucosylceramidases that catalyze the conversion of glucosylceramide to free glucose and ceramide []	Back alignment and domain information

>TIGR01577 oligosac_amyl oligosaccharide amylase	Back alignment and domain information

>TIGR01531 glyc_debranch glycogen debranching enzymye	Back alignment and domain information

>COG4354 Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism]	Back alignment and domain information

>PF06824 DUF1237: Protein of unknown function (DUF1237); InterPro: IPR008313 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function	Back alignment and domain information

>COG3387 SGA1 Glucoamylase and related glycosyl hydrolases [Carbohydrate transport and metabolism]	Back alignment and domain information

>TIGR01535 glucan_glucosid glucan 1,4-alpha-glucosidase	Back alignment and domain information

>COG3459 Cellobiose phosphorylase [Carbohydrate transport and metabolism]	Back alignment and domain information

>KOG2119 consensus Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism]	Back alignment and domain information

>COG3538 Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>PLN03005 beta-fructofuranosidase	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Alignment Graph	Length	Definition	E-value
Query		516
2jg0_A		535	Family 37 Trehalase From Escherichia Coli In Comple		8e-25
2jf4_A		535	Family 37 Trehalase From Escherichia Coli In Comple		4e-22

>pdb|2JG0|A Chain A, Family 37 Trehalase From Escherichia Coli In Complex With 1- Thiatrehazolin Length = 535

Back alignment and structure

Iteration: 1

Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 114/443 (25%), Positives = 168/443 (37%), Gaps = 127/443 (28%) Query: 157 PQVRAWALEVHALWKNLSRRVSGSVLDRLEFHTLLLLPGPIVIPSSRFREVYYWDSYWVI 216 P+ ++ + LW L+R S + ++ +LL LP P V+P RFREVYYWDSY+ + Sbjct: 80 PEGQSLREHIDGLWPVLTR----STENTEKWDSLLPLPEPYVVPGGRFREVYYWDSYFTM 135 Query: 217 ----------------------------------------SQPPILSAMVYDIYNRTGDF 236 SQPP + MV + GD Sbjct: 136 LGLAESGHWDKVADMVANFAHEIDTYGHIPNGNRSYYLSRSQPPFFALMVELLAQHEGDA 195 Query: 237 DFVKKALPALLKEHQFWNSRIHKVNVQDDQGGNHT--------LSRYYAMWNKPRPESST 288 +K+ LP + KE+ +W + N+Q Q L+RY+ + PRPES Sbjct: 196 -ALKQYLPQMQKEYAYWMDGVE--NLQAGQQEKRVVKLQDGTLLNRYWDDRDTPRPESWV 252 Query: 289 IDKAHSSKLLNASDKE---------------------NTSDFTTLAITSILPIDLNIFIL 327 D A + N E N TL TSI+P+DLN + Sbjct: 253 EDIATAKSNPNRPATEIYRDLRSAAASGWDFSSRWMDNPQQLNTLRTTSIVPVDLNSLMF 312 Query: 328 KMELDIASMAQIVGDNRTAESFLKTAQARKQAINSVFWNEEKGQWLDYWISNGTSSQECR 387 KME +A ++ GDN A + A AR++ I WN+++G + DY S + R Sbjct: 313 KMEKILARASKAAGDNAMANQYETLANARQKGIEKYLWNDQQGWYADY----DLKSHKVR 368 Query: 388 RWKXXXXXXXXXXXXXVPIWIDLFNSDTCIVEKVRKGFQSSGLLGAAGIATSLTRSGEQ- 446 P++++ D K+ ++ LL G+ T+ +SG+Q Sbjct: 369 N--------QLTAAALFPLYVNAAAKDRA--NKMATATKTH-LLQPGGLNTTSVKSGQQW 417 Query: 447 --------CNYVA---------------------------YKETGAMHEKYDVEKCRDIG 471 +VA Y + EKYDV G Sbjct: 418 DAPNGWAPLQWVATEGLQNYGQKEVAMDISWHFLTNVQHTYDREKKLVEKYDVSTTGTGG 477 Query: 472 GGGEYIPQTGFSWSNGAVLAFLE 494 GGGEY Q GF W+NG L L+ Sbjct: 478 GGGEYPLQDGFGWTNGVTLKMLD 500

PyMOL of 2jg0

>pdb|2JF4|A Chain A, Family 37 Trehalase From Escherichia Coli In Complex With Validoxylamine Length = 535

Back alignment and structure

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		516
2jg0_A		535	Periplasmic trehalase; family 37, hydrolase, inhib	3e-67
3c68_A		761	Uncharacterized protein YGJK; GH63, processing alp	5e-26
2z07_A		420	Putative uncharacterized protein TTHA0978; unchara	4e-17
2okx_A		956	Rhamnosidase B; alpha barrel, glycoside hydrolase	2e-07
1v7w_A		807	Chitobiose phosphorylase; beta-sandwich, (alpha/al	6e-07
3cih_A		739	Putative alpha-rhamnosidase; structural genomics,	3e-06
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-05

>2jg0_A Periplasmic trehalase; family 37, hydrolase, inhibitor, glycoside hydrolase, glycosidase, 1-thiatrehazolin; HET: TTZ; 1.50A {Escherichia coli} SCOP: a.102.1.9 PDB: 2jf4_A* 2jjb_A* 2wyn_A* Length = 535	Back alignment and structure

 Score =  225 bits (573), Expect = 3e-67
 Identities = 122/550 (22%), Positives = 182/550 (33%), Gaps = 158/550 (28%)

Query: 56  PVVPTTPLVTF---LERVQEIALATFGKKDFDPKLYVDLSLKSGLSTTVTAFHKLPRNAS 112
           PV P  P +        VQ   L        D K + D    S     +  +        
Sbjct: 4   PVTPQPPDILLGPLFNDVQNAKLFP------DQKTFADAVPNSDPLMILADYRMQQNQ-- 55

Query: 113 ESVSAPDFKEFLHEYFDGAGDDLVYAEPPDFVPEPDGFLPKVKNPQVRAWALEVHALWKN 172
              S  D + F++  F                        K   P+ ++    +  LW  
Sbjct: 56  ---SGFDLRHFVNVNFT-----------------LPKEGEKYVPPEGQSLREHIDGLWPV 95

Query: 173 LSRRVSGSVLDRLEFHTLLLLPGPIVIPSSRFREVYYWDSYWVI---------------- 216
           L+R    +     ++ +LL LP P V+P  RFREVYYWDSY+ +                
Sbjct: 96  LTRSTENTE----KWDSLLPLPEPYVVPGGRFREVYYWDSYFTMLGLAESGHWDKVADMV 151

Query: 217 ------------------------SQPPILSAMVYDIYNRTGDFDFVKKALPALLKEHQF 252
                                   SQPP  + MV  +    GD   +K+ LP + KE+ +
Sbjct: 152 ANFAHEIDTYGHIPNGNRSYYLSRSQPPFFALMVELLAQHEGD-AALKQYLPQMQKEYAY 210

Query: 253 W------NSRIHKVNVQDDQGGNHTLSRYYAMWNKPRPESSTIDKAHSSKLLNASDKE-- 304
           W           +            L+RY+   + PRPES   D A +    N    E  
Sbjct: 211 WMDGVENLQAGQQEKRVVKLQDGTLLNRYWDDRDTPRPESWVEDIATAKSNPNRPATEIY 270

Query: 305 -------------------NTSDFTTLAITSILPIDLNIFILKMELDIASMAQIVGDNRT 345
                              N     TL  TSI+P+DLN  + KME  +A  ++  GDN  
Sbjct: 271 RDLRSAAASGWDFSSRWMDNPQQLNTLRTTSIVPVDLNSLMFKMEKILARASKAAGDNAM 330

Query: 346 AESFLKTAQARKQAINSVFWNEEKGQWLDYWISNGTSSQECRRWKASNQNNNAFASNFVP 405
           A  +   A AR++ I    WN+++G + DY + +                N   A+   P
Sbjct: 331 ANQYETLANARQKGIEKYLWNDQQGWYADYDLKSHK------------VRNQLTAAALFP 378

Query: 406 IWIDLFNSD--TCIVEKVRKGFQSSGLLGAAGIATSLTRSGEQ----------------- 446
           ++++    D    +    +      G     G+ T+  +SG+Q                 
Sbjct: 379 LYVNAAAKDRANKMATATKTHLLQPG-----GLNTTSVKSGQQWDAPNGWAPLQWVATEG 433

Query: 447 -------------------CNYVAYKETGAMHEKYDVEKCRDIGGGGEYIPQTGFSWSNG 487
                                   Y     + EKYDV      GGGGEY  Q GF W+NG
Sbjct: 434 LQNYGQKEVAMDISWHFLTNVQHTYDREKKLVEKYDVSTTGTGGGGGEYPLQDGFGWTNG 493

Query: 488 AVLAFLEEFG 497
             L  L+   
Sbjct: 494 VTLKMLDLIC 503

PyMOL of 2jg0

>2z07_A Putative uncharacterized protein TTHA0978; uncharacterized conserved protein, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} Length = 420	Back alignment and structure

>2okx_A Rhamnosidase B; alpha barrel, glycoside hydrolase family 78, I hydrolase; 1.90A {Bacillus SP} Length = 956	Back alignment and structure

>1v7w_A Chitobiose phosphorylase; beta-sandwich, (alpha/alpha)6 barrel, transferase; HET: NDG NAG; 1.60A {Vibrio proteolyticus} SCOP: a.102.1.4 b.30.5.3 PDB: 1v7v_A* 1v7x_A* Length = 807	Back alignment and structure

>3cih_A Putative alpha-rhamnosidase; structural genomics, protein structure initiative II, NYSGXRC, (alpha/alpha)6 barrel domain; 2.33A {Bacteroides thetaiotaomicron vpi-5482} Length = 739	Back alignment and structure

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		516
2jg0_A		535	Periplasmic trehalase; family 37, hydrolase, inhib	100.0
2z07_A		420	Putative uncharacterized protein TTHA0978; unchara	100.0
3c68_A		761	Uncharacterized protein YGJK; GH63, processing alp	100.0
2okx_A		956	Rhamnosidase B; alpha barrel, glycoside hydrolase	99.67
3cih_A		739	Putative alpha-rhamnosidase; structural genomics,	99.57
1v7w_A		807	Chitobiose phosphorylase; beta-sandwich, (alpha/al	99.3
3qde_A		811	Cellobiose phosphorylase; cellulase, phosphate, tr	98.93
3rrs_A		822	Cellobiose phosphorylase; GH94, alpha barrel, disa	98.92
2p0v_A		489	Hypothetical protein BT3781; alpha-beta protein, s	98.0
3p2c_A		463	Putative glycosyl hydrolase; structural genomics,	97.21
3qt9_A		427	Putative uncharacterized protein CPE0426; alpha-al	96.88
1lf6_A		684	Glucoamylase; (alpha/alpha) barrel, 6 alpha-helica	96.43
3qry_B		426	Putative uncharacterized protein; alpha-alpha six	96.12
1ulv_A		1020	Glucodextranase; GH family 15, (alpha-alpha)6-barr	96.09
2fba_A		492	Glucoamylase Glu1; (alpha-alpha)6 barrel, TRIS, hy	86.41
2vn4_A		599	Glucoamylase; hydrolase, carbohydrate binding, gly	85.53
2rdy_A		803	BH0842 protein; PSI-II, structural genomics, prote	82.21

>2jg0_A Periplasmic trehalase; family 37, hydrolase, inhibitor, glycoside hydrolase, glycosidase, 1-thiatrehazolin; HET: TTZ; 1.50A {Escherichia coli} SCOP: a.102.1.9 PDB: 2jf4_A* 2jjb_A* 2wyn_A*	Back alignment and structure

Probab=100.00  E-value=4.5e-88  Score=737.00  Aligned_cols=396  Identities=31%  Similarity=0.531  Sum_probs=343.9

Q ss_pred             HHhhchhHHhhhhcCC-C-CCCCcCCCCCCCCHHHHHHHHhcCCccCCCCCChHHHHHHHHhhcCCCCCCcccCCCCCCC
Q 041103           67 LERVQEIALATFGKKD-F-DPKLYVDLSLKSGLSTTVTAFHKLPRNASESVSAPDFKEFLHEYFDGAGDDLVYAEPPDFV  144 (516)
Q Consensus        67 ~~~~~g~ll~~vq~~~-f-DsKtFvD~~~k~~~~~il~~f~~l~~~~~~~~~~~~l~~Fv~~~F~~~g~el~~~~p~d~~  144 (516)
                      .+||+|+||++||+++ | ||||||||++|.+|++||++|++++.     .++++|++||++||..||.+ +     +|+
T Consensus        10 ~~~~~g~l~~~vq~~~~f~d~k~fvd~~~~~~~~~~~~~~~~~~~-----~~~~~l~~fv~~~f~~~~~~-~-----~~~   78 (535)
T 2jg0_A           10 PDILLGPLFNDVQNAKLFPDQKTFADAVPNSDPLMILADYRMQQN-----QSGFDLRHFVNVNFTLPKEG-E-----KYV   78 (535)
T ss_dssp             HHHHTHHHHHHHHHTTCSSSHHHHHTCEESSCHHHHHHHHHHHTT-----STTCCHHHHHHHHEECCC----------CC
T ss_pred             chhhhHHHHHHHHHccCCCCCCcCCCCcCCCCHHHHHHHHHHhhc-----CcHHHHHHHHHHhcCCCCcc-c-----cCC
Confidence            5799999999999999 9 99999999999999999999999874     46789999999999999975 3     344


Q ss_pred             CCCCCcCCCCCChhHHHHHHHHHHhhhccccccccccccCCCccccccCCCCcccCCCCCcceeeccccccc--------
Q 041103          145 PEPDGFLPKVKNPQVRAWALEVHALWKNLSRRVSGSVLDRLEFHTLLLLPGPIVIPSSRFREVYYWDSYWVI--------  216 (516)
Q Consensus       145 ~~p~~~l~~i~d~~~r~~a~~i~~lW~~L~R~~~~~v~~~p~~~sli~lp~pfiVPGGRFrE~YYWDSYfi~--------  216 (516)
                      ++|           .+.|+.+||++|+.|+|+++    ++|+++||||||+|||||||||+|+|||||||++        
T Consensus        79 ~~~-----------~~~~~~~i~~~W~~l~r~~~----~~~~~~sli~~p~~~vvPGg~F~~~~~WDs~f~~~gLl~~~~  143 (535)
T 2jg0_A           79 PPE-----------GQSLREHIDGLWPVLTRSTE----NTEKWDSLLPLPEPYVVPGGRFREVYYWDSYFTMLGLAESGH  143 (535)
T ss_dssp             CCT-----------TCCHHHHHHHHTTTTEECCS----SCCTTCSBCCCSSCEECCBTTBCSCBHHHHHHHHHHHHHTTC
T ss_pred             CCc-----------hHHHHHHHHHHHHHHcCCCC----CCCCccccccCCCCcccCCccccccchHHHHHHHHHHHHcCC
Confidence            434           13467899999999999886    4689999999999999999999999999999998        


Q ss_pred             --------------------------------cCCchHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCccc----
Q 041103          217 --------------------------------SQPPILSAMVYDIYNRTGDFDFVKKALPALLKEHQFWNSRIHKV----  260 (516)
Q Consensus       217 --------------------------------SQPPlla~mV~~~y~~t~D~~fL~~~lP~L~kEy~fW~~~R~~v----  260 (516)
                                                      ||||+|++||.+||+++++ +||++++|.|+|||+||+++|+..    
T Consensus       144 ~~~A~~~l~~~~~~~~~~G~IPng~r~yY~~~sqPPl~~~~v~~~~~~~~~-~fL~~~~p~L~~~~~ww~~~~~~~~~g~  222 (535)
T 2jg0_A          144 WDKVADMVANFAHEIDTYGHIPNGNRSYYLSRSQPPFFALMVELLAQHEGD-AALKQYLPQMQKEYAYWMDGVENLQAGQ  222 (535)
T ss_dssp             HHHHHHHHHHHHHHHHHHSSCCSBSBGGGTTCCCSCCHHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHTTTCTTCCTTE
T ss_pred             HHHHHHHHHHHHHhhccCCcccCCCCccCCCCCCccHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHHHHHhCCcccCccc
Confidence                                            8999999999999999875 999999999999999999998731    


Q ss_pred             ----cccCCCCCeeeeEeeecCCCCCCCCCcchhhhhhcccCCccc------------c---------cCCCCCCccccc
Q 041103          261 ----NVQDDQGGNHTLSRYYAMWNKPRPESSTIDKAHSSKLLNASD------------K---------ENTSDFTTLAIT  315 (516)
Q Consensus       261 ----~~~~~~G~~~~L~rY~~~~~~PRPESyreD~~~A~~~~~~~e------------k---------~d~~~l~si~t~  315 (516)
                          .+...+|.  +|++||+....|||||||+|+.++.+......            .         .+.++|.+++|.
T Consensus       223 ~~~~~~~~~~G~--~l~~y~~~~~~prpesyr~d~~~~~~~~~~~~~~~y~~~~~~~eSGwD~s~R~~~~~~~l~~~~t~  300 (535)
T 2jg0_A          223 QEKRVVKLQDGT--LLNRYWDDRDTPRPESWVEDIATAKSNPNRPATEIYRDLRSAAASGWDFSSRWMDNPQQLNTLRTT  300 (535)
T ss_dssp             EETTEEECTTSC--EEECCCCSCCSCCGGGHHHHHHHHHTCTTSCHHHHHHHHHHHHHTTCCSCGGGBSSTTCGGGBCGG
T ss_pred             cccceeecCCCC--cceeeccCCCCCCCcceeehhhhhhccccchhHHHHHHHHHHHhCCCCCccccCCCCCcccccCCc
Confidence                11223453  69999999999999999999988764321100            0         235667788999


Q ss_pred             cccchhHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhcccCCCCeEEeeeccCCcccchhhhhcccCCC
Q 041103          316 SILPIDLNIFILKMELDIASMAQIVGDNRTAESFLKTAQARKQAINSVFWNEEKGQWLDYWISNGTSSQECRRWKASNQN  395 (516)
Q Consensus       316 ~iiPVDLNAlLy~~e~~LA~la~~lG~~~~A~~~~~~A~~rk~aIn~~lWDee~G~y~Dydl~~~~~~~~~y~~~~~~~~  395 (516)
                      +|+||||||+||.+++.||+||+++|+.+++++|+++|++++++|+++|||++.|+|+||++.+++            ++
T Consensus       301 ~i~~VDlnA~ly~a~~~la~lA~~lG~~~~a~~~~~~A~~lk~ai~~~fWdee~G~y~D~~~~~~~------------~~  368 (535)
T 2jg0_A          301 SIVPVDLNSLMFKMEKILARASKAAGDNAMANQYETLANARQKGIEKYLWNDQQGWYADYDLKSHK------------VR  368 (535)
T ss_dssp             GEECHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHSEETTTTEECCEETTTTE------------EC
T ss_pred             cchhhHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhCcCCCCCEEEEEeCCCCC------------Ee
Confidence            999999999999999999999999999999999999999999999999999999999999998765            56


Q ss_pred             CccchhhHHHHhhcCCCCchHHHHHHHhhhhhcCCcccceeeeccCCChhh-----------------------------
Q 041103          396 NNAFASNFVPIWIDLFNSDTCIVEKVRKGFQSSGLLGAAGIATSLTRSGEQ-----------------------------  446 (516)
Q Consensus       396 ~~~~~s~~~PLwagia~~~~~~a~~vl~~L~~~~ll~~gGIpTsl~~sgqQ-----------------------------  446 (516)
                      +++++++++|||+|++++  +++++|++.|.+ +|+.++||+|+..++|+|                             
T Consensus       369 ~~~~~s~~~PL~~gi~~~--e~a~~v~~~l~~-~l~t~~GlrT~s~~s~~yW~GpNvW~~~~~l~i~gL~~yG~~~~A~~  445 (535)
T 2jg0_A          369 NQLTAAALFPLYVNAAAK--DRANKMATATKT-HLLQPGGLNTTSVKSGQQWDAPNGWAPLQWVATEGLQNYGQKEVAMD  445 (535)
T ss_dssp             CCCBGGGGHHHHTTCSCH--HHHHHHHHHHHH-HTEETTEECSBSCCCSSSSSTTEECHHHHHHHHHHHHTTTCHHHHHH
T ss_pred             eeehhhhHHHHhcCCCCH--HHHHHHHHHHHH-HhccCCCCCCCcCCCccccCCCCcchhHHHHHHHHHHHcCCHHHHHH
Confidence            789999999999999995  578999999975 788999999988887765                             


Q ss_pred             -------HHHHHHHHhCcccccccccccccCCCCCccCCCCCccccHHHHHHHHHHcCCCCCCCCCCCcc
Q 041103          447 -------CNYVAYKETGAMHEKYDVEKCRDIGGGGEYIPQTGFSWSNGAVLAFLEEFGWPEDLKIGCNWV  509 (516)
Q Consensus       447 -------~n~~~y~~tG~m~EKYdv~~~g~~GgGGEY~~Q~GFGWTNGV~L~ll~~yg~~~~~~~~c~~~  509 (516)
                             ++...|.++|.|+||||+.+++..|+||||++|.||||||||+|.|+.+||..++   .|+.+
T Consensus       446 la~~~l~~~~~~~~~~G~l~E~yd~~~~~~~G~ggeY~~~~~fgWT~av~l~ll~~y~~~~~---~~~~~  512 (535)
T 2jg0_A          446 ISWHFLTNVQHTYDREKKLVEKYDVSTTGTGGGGGEYPLQDGFGWTNGVTLKMLDLICPKEQ---PCDNV  512 (535)
T ss_dssp             HHHHHHHHHHHHHHHHSSCBSCEETTSSSCBCCCSSSCCCBSCHHHHHHHHHHHHHHSCSSS---CCSSC
T ss_pred             HHHHHHHHHHHHhccCCeeeeeECCCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHhhhhcc---CCccc
Confidence                   3456677889999999999877778889999999999999999999999999763   47644

PyMOL of 2jg0

>2z07_A Putative uncharacterized protein TTHA0978; uncharacterized conserved protein, structural genomics, NPPSFA; 2.10A {Thermus thermophilus}	Back alignment and structure

>2okx_A Rhamnosidase B; alpha barrel, glycoside hydrolase family 78, I hydrolase; 1.90A {Bacillus SP}	Back alignment and structure

>3cih_A Putative alpha-rhamnosidase; structural genomics, protein structure initiative II, NYSGXRC, (alpha/alpha)6 barrel domain; 2.33A {Bacteroides thetaiotaomicron vpi-5482}	Back alignment and structure

>1v7w_A Chitobiose phosphorylase; beta-sandwich, (alpha/alpha)6 barrel, transferase; HET: NDG NAG; 1.60A {Vibrio proteolyticus} SCOP: a.102.1.4 b.30.5.3 PDB: 1v7v_A* 1v7x_A*	Back alignment and structure

>3qde_A Cellobiose phosphorylase; cellulase, phosphate, transferase; 2.40A {Clostridium thermocellum}	Back alignment and structure

>3rrs_A Cellobiose phosphorylase; GH94, alpha barrel, disaccharide phosphorylase, transferase; 1.70A {Cellulomonas uda} PDB: 3rsy_A* 3s4a_A* 3s4b_A* 3s4c_A* 3s4d_A* 2cqs_A* 2cqt_A* 3qfy_A* 3qfz_A* 3qg0_A* 3act_A* 3acs_A* 3afj_A*	Back alignment and structure

>2p0v_A Hypothetical protein BT3781; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacteroides thetaiotaomicron vpi-5482} SCOP: a.102.1.8	Back alignment and structure

>3p2c_A Putative glycosyl hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE PGE; 1.60A {Bacteroides ovatus} SCOP: a.102.1.8 PDB: 3on6_A*	Back alignment and structure

>3qt9_A Putative uncharacterized protein CPE0426; alpha-alpha six fold, glycoside hydrolase, mannosidase, HYDR; HET: YDR; 2.05A {Clostridium perfringens} SCOP: a.102.1.8 PDB: 3qt3_A* 2nvp_A	Back alignment and structure

>1lf6_A Glucoamylase; (alpha/alpha) barrel, 6 alpha-helical hairpin torroid, super beta sandwich, carbohydrase family GH15; 2.10A {Thermoanaerobacteriumthermosaccharolyticum} SCOP: a.102.1.5 b.30.5.5 PDB: 1lf9_A*	Back alignment and structure

>3qry_B Putative uncharacterized protein; alpha-alpha six fold, glycoside hydrolase, mannosidase, 1- deoxymannojirimycin, hydrolase; HET: DMJ; 1.75A {Streptococcus pneumoniae} SCOP: a.102.1.0 PDB: 3qpf_A* 3qsp_A*	Back alignment and structure

>1ulv_A Glucodextranase; GH family 15, (alpha-alpha)6-barrel, SLH domain, hydrolase; HET: ACR; 2.42A {Arthrobacter globiformis} SCOP: a.102.1.5 b.1.18.2 b.1.9.3 b.30.5.5 PDB: 1ug9_A*	Back alignment and structure

>2fba_A Glucoamylase Glu1; (alpha-alpha)6 barrel, TRIS, hydrolase; 1.10A {Saccharomycopsis fibuligera} SCOP: a.102.1.1 PDB: 1ayx_A* 2f6d_A	Back alignment and structure

>2vn4_A Glucoamylase; hydrolase, carbohydrate binding, glycoside hydrolase family 15, amyloglucosidase; HET: MAN NAG BTB; 1.85A {Hypocrea jecorina} PDB: 2vn7_A*	Back alignment and structure

>2rdy_A BH0842 protein; PSI-II, structural genomics, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.03A {Bacillus halodurans c-125}	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	E-value
Query		516
d2jg0a1		511	a.102.1.9 (A:37-547) Periplasmic trehalase TreA {E	1e-73

>d2jg0a1 a.102.1.9 (A:37-547) Periplasmic trehalase TreA {Escherichia coli [TaxId: 562]} Length = 511	Back information, alignment and structure


class: All alpha proteins
fold: alpha/alpha toroid
superfamily: Six-hairpin glycosidases
family: Trehalase-like
domain: Periplasmic trehalase TreA
species: Escherichia coli [TaxId: 562]

 Score =  240 bits (613), Expect = 1e-73
 Identities = 114/519 (21%), Positives = 176/519 (33%), Gaps = 149/519 (28%)

Query: 84  DPKLYVDLSLKSGLSTTVTAFHKLPRNASESVSAPDFKEFLHEYFDGAGDDLVYAEPPDF 143
           D K + D    S     +  +      +       D + F++  F               
Sbjct: 23  DQKTFADAVPNSDPLMILADYRMQQNQSGF-----DLRHFVNVNFT-------------- 63

Query: 144 VPEPDGFLPKVKNPQVRAWALEVHALWKNLSRRVSGSVLDRLEFHTLLLLPGPIVIPSSR 203
                    K   P+ ++    +  LW  L+R    +     ++ +LL LP P V+P  R
Sbjct: 64  ---LPKEGEKYVPPEGQSLREHIDGLWPVLTRSTENTE----KWDSLLPLPEPYVVPGGR 116

Query: 204 FREVYYWDSYWVI----------------------------------------SQPPILS 223
           FREVYYWDSY+ +                                        SQPP  +
Sbjct: 117 FREVYYWDSYFTMLGLAESGHWDKVADMVANFAHEIDTYGHIPNGNRSYYLSRSQPPFFA 176

Query: 224 AMVYDIYNRTGDFDFVKKALPALLKEHQFWNSRIHKVNVQDDQGG------NHTLSRYYA 277
            MV  +    GD   +K+ LP + KE+ +W   +  +     +           L+RY+ 
Sbjct: 177 LMVELLAQHEGD-AALKQYLPQMQKEYAYWMDGVENLQAGQQEKRVVKLQDGTLLNRYWD 235

Query: 278 MWNKPRPESSTIDKAHSSKLLNASDKE---------------------NTSDFTTLAITS 316
             + PRPES   D A +    N    E                     N     TL  TS
Sbjct: 236 DRDTPRPESWVEDIATAKSNPNRPATEIYRDLRSAAASGWDFSSRWMDNPQQLNTLRTTS 295

Query: 317 ILPIDLNIFILKMELDIASMAQIVGDNRTAESFLKTAQARKQAINSVFWNEEKGQWLDYW 376
           I+P+DLN  + KME  +A  ++  GDN  A  +   A AR++ I    WN+++G + DY 
Sbjct: 296 IVPVDLNSLMFKMEKILARASKAAGDNAMANQYETLANARQKGIEKYLWNDQQGWYADYD 355

Query: 377 ISNGTSSQECRRWKASNQNNNAFASNFVPIWIDLFNSDTC--IVEKVRKGFQSSGLLGAA 434
           + +                N   A+   P++++    D    +    +      G     
Sbjct: 356 LKSH------------KVRNQLTAAALFPLYVNAAAKDRANKMATATKTHLLQPG----- 398

Query: 435 GIATSLTRSGEQ------------------------------------CNYVAYKETGAM 458
           G+ T+  +SG+Q                                         Y     +
Sbjct: 399 GLNTTSVKSGQQWDAPNGWAPLQWVATEGLQNYGQKEVAMDISWHFLTNVQHTYDREKKL 458

Query: 459 HEKYDVEKCRDIGGGGEYIPQTGFSWSNGAVLAFLEEFG 497
            EKYDV      GGGGEY  Q GF W+NG  L  L+   
Sbjct: 459 VEKYDVSTTGTGGGGGEYPLQDGFGWTNGVTLKMLDLIC 497

PyMOL of d2jg0a1

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		516
d2jg0a1		511	Periplasmic trehalase TreA {Escherichia coli [TaxI	100.0
d1v7wa1		531	Chitobiose phosphorylase ChbP {Vibrio proteolyticu	99.12
d1lf6a1		397	Bacterial glucoamylase, C-terminal domain {Thermoa	96.66
d2p0va1		443	Hypothetical protein BT3781 {Bacteroides thetaiota	93.99
d2nvpa1		426	Hypothetical protein CPF0428 {Clostridium perfring	93.47
d1ulva1		413	Glucodextranase, domain A {Arthrobacter globiformi	92.64

>d2jg0a1 a.102.1.9 (A:37-547) Periplasmic trehalase TreA {Escherichia coli [TaxId: 562]}	Back information, alignment and structure

class: All alpha proteins
fold: alpha/alpha toroid
superfamily: Six-hairpin glycosidases
family: Trehalase-like
domain: Periplasmic trehalase TreA
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=6.5e-100  Score=824.73  Aligned_cols=397  Identities=30%  Similarity=0.504  Sum_probs=352.0

Q ss_pred             HHhhchhHHhhhhcCC-C-CCCCcCCCCCCCCHHHHHHHHhcCCccCCCCCChHHHHHHHHhhcCCCCCCcccCCCCCCC
Q 041103           67 LERVQEIALATFGKKD-F-DPKLYVDLSLKSGLSTTVTAFHKLPRNASESVSAPDFKEFLHEYFDGAGDDLVYAEPPDFV  144 (516)
Q Consensus        67 ~~~~~g~ll~~vq~~~-f-DsKtFvD~~~k~~~~~il~~f~~l~~~~~~~~~~~~l~~Fv~~~F~~~g~el~~~~p~d~~  144 (516)
                      .++|.|+||++||+++ | ||||||||+||.+|++||++|++++.     .++++|++||++||+.|. +++.|+|+|| 
T Consensus         4 ~~~~~g~ll~~vq~~~~~~dsk~fvd~~~~~~~~~~~~~~~~~~~-----~~~~~l~~f~~~~f~~~~-~~~~~~~~~~-   76 (511)
T d2jg0a1           4 PDILLGPLFNDVQNAKLFPDQKTFADAVPNSDPLMILADYRMQQN-----QSGFDLRHFVNVNFTLPK-EGEKYVPPEG-   76 (511)
T ss_dssp             HHHHTHHHHHHHHHTTCSSSHHHHHTCEESSCHHHHHHHHHHHTT-----STTCCHHHHHHHHEECCC-----CCCCTT-
T ss_pred             hHHHhHHHHHHHHHhCCCCCCCcccCCCCCCCHHHHHHHHHhhcC-----CCHHHHHHHHHHhCCCCc-ccccCCCchH-
Confidence            4599999999999999 9 99999999999999999999998864     577899999999999874 6777776654 


Q ss_pred             CCCCCcCCCCCChhHHHHHHHHHHhhhccccccccccccCCCccccccCCCCcccCCCCCcceeeccccccc--------
Q 041103          145 PEPDGFLPKVKNPQVRAWALEVHALWKNLSRRVSGSVLDRLEFHTLLLLPGPIVIPSSRFREVYYWDSYWVI--------  216 (516)
Q Consensus       145 ~~p~~~l~~i~d~~~r~~a~~i~~lW~~L~R~~~~~v~~~p~~~sli~lp~pfiVPGGRFrE~YYWDSYfi~--------  216 (516)
                                     |+|+.+||+||+.|+|+++++    |+++||||||||||||||||||+||||||||+        
T Consensus        77 ---------------~~~~~~~~~~w~~l~r~~~~~----~~~~sli~~p~p~iVPGgrF~e~yyWDSyfi~lGLl~~~~  137 (511)
T d2jg0a1          77 ---------------QSLREHIDGLWPVLTRSTENT----EKWDSLLPLPEPYVVPGGRFREVYYWDSYFTMLGLAESGH  137 (511)
T ss_dssp             ---------------CCHHHHHHHHTTTTEECCSSC----CTTCSBCCCSSCEECCBTTBCSCBHHHHHHHHHHHHHTTC
T ss_pred             ---------------HHHHHHHHHHHHHhccCCCCC----CCCCceeeCCCCeeCCCCCcCcccchHHHHHHHHHHhCCc
Confidence                           578999999999999987653    68899999999999999999999999999999        


Q ss_pred             --------------------------------cCCchHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCcccc---
Q 041103          217 --------------------------------SQPPILSAMVYDIYNRTGDFDFVKKALPALLKEHQFWNSRIHKVN---  261 (516)
Q Consensus       217 --------------------------------SQPPlla~mV~~~y~~t~D~~fL~~~lP~L~kEy~fW~~~R~~v~---  261 (516)
                                                      ||||+|++||..|+++|+| +||++++|.|++||+|||++++...   
T Consensus       138 ~~~a~~ml~nf~~~i~~~G~IPng~r~yy~~rSQPPlla~mv~~~~~~t~D-~~L~~~lp~L~~e~~~W~~~~~~~~~~~  216 (511)
T d2jg0a1         138 WDKVADMVANFAHEIDTYGHIPNGNRSYYLSRSQPPFFALMVELLAQHEGD-AALKQYLPQMQKEYAYWMDGVENLQAGQ  216 (511)
T ss_dssp             HHHHHHHHHHHHHHHHHHSSCCSBSBGGGTTCCCSCCHHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHTTTCTTCCTTE
T ss_pred             HHHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCccHHHHHHHHHHHHHhCh-HHHHHHHHHHHHHHHHHHhcCCcccCCC
Confidence                                            9999999999999999998 7899999999999999999877421   


Q ss_pred             -----ccCCCCCeeeeEeeecCCCCCCCCCcchhhhhhcccCCcccc---------------------cCCCCCCccccc
Q 041103          262 -----VQDDQGGNHTLSRYYAMWNKPRPESSTIDKAHSSKLLNASDK---------------------ENTSDFTTLAIT  315 (516)
Q Consensus       262 -----~~~~~G~~~~L~rY~~~~~~PRPESyreD~~~A~~~~~~~ek---------------------~d~~~l~si~t~  315 (516)
                           +...+|  +.++|||+...+||||||++|+.++........+                     .++.++.+++|+
T Consensus       217 ~~~~~~~~~~g--~~l~ry~~~~~~prpEsyr~D~~~a~~~~~~~~~~~y~~l~s~~ESGwD~S~Rw~~~~~~l~~~~t~  294 (511)
T d2jg0a1         217 QEKRVVKLQDG--TLLNRYWDDRDTPRPESWVEDIATAKSNPNRPATEIYRDLRSAAASGWDFSSRWMDNPQQLNTLRTT  294 (511)
T ss_dssp             EETTEEECTTS--CEEECCCCSCCSCCGGGHHHHHHHHHTCTTSCHHHHHHHHHHHHHTTCCSCGGGBSSTTCGGGBCGG
T ss_pred             ceeeeecCCCC--ccccccccccCCCCchhhhhhhhhhhcccchhHHHHHHHHHHHHhccCCccccccCChhhhcccccc
Confidence                 122333  4799999999999999999999988765322111                     356677889999


Q ss_pred             cccchhHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhcccCCCCeEEeeeccCCcccchhhhhcccCCC
Q 041103          316 SILPIDLNIFILKMELDIASMAQIVGDNRTAESFLKTAQARKQAINSVFWNEEKGQWLDYWISNGTSSQECRRWKASNQN  395 (516)
Q Consensus       316 ~iiPVDLNAlLy~~e~~LA~la~~lG~~~~A~~~~~~A~~rk~aIn~~lWDee~G~y~Dydl~~~~~~~~~y~~~~~~~~  395 (516)
                      +|+||||||+||+++++||.+|+++|+.+++.+|+++|++++++|+++|||++.|+|+|||+.+++            ++
T Consensus       295 ~i~pVDLNsll~~~~~~La~la~~lg~~~~a~~~~~~a~~~~~ai~~~lWd~e~g~~~Dyd~~~~~------------~~  362 (511)
T d2jg0a1         295 SIVPVDLNSLMFKMEKILARASKAAGDNAMANQYETLANARQKGIEKYLWNDQQGWYADYDLKSHK------------VR  362 (511)
T ss_dssp             GEECHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHSEETTTTEECCEETTTTE------------EC
T ss_pred             ccccccHHHHHHHHHHHHHHHHHHhcchHhHHHHHHHHHHHHHHHHHHhccCccCeeEEEecCCCC------------EE
Confidence            999999999999999999999999999999999999999999999999999999999999999876            67


Q ss_pred             CccchhhHHHHhhcCCCCchHHHHHHHhhhhhcCCcccceeeeccCCChhh-----------------------------
Q 041103          396 NNAFASNFVPIWIDLFNSDTCIVEKVRKGFQSSGLLGAAGIATSLTRSGEQ-----------------------------  446 (516)
Q Consensus       396 ~~~~~s~~~PLwagia~~~~~~a~~vl~~L~~~~ll~~gGIpTsl~~sgqQ-----------------------------  446 (516)
                      ..+++++++|||+|++++  ++++++++.+.+ .++++|||||++.++|+|                             
T Consensus       363 ~~~~~~~~~PL~~g~~~~--~~~~~~~~~l~~-~~~~~gGipt~~~~~~~yWrgPnvW~p~n~lii~gL~~yG~~e~A~~  439 (511)
T d2jg0a1         363 NQLTAAALFPLYVNAAAK--DRANKMATATKT-HLLQPGGLNTTSVKSGQQWDAPNGWAPLQWVATEGLQNYGQKEVAMD  439 (511)
T ss_dssp             CCCBGGGGHHHHTTCSCH--HHHHHHHHHHHH-HTEETTEECSBSCCCSSSSSTTEECHHHHHHHHHHHHTTTCHHHHHH
T ss_pred             eeeccchhhHhhccCCCH--HHHHHHHHHHHH-hhccCCCcCCCCCCCCCCCCCCCcCHhHHHHHHHHHHHcCCHHHHHH
Confidence            789999999999999985  578999998875 578999999999999988                             


Q ss_pred             -------HHHHHHHHhCcccccccccccccCCCCCccCCCCCccccHHHHHHHHHHcCCCCCCCCCCCc
Q 041103          447 -------CNYVAYKETGAMHEKYDVEKCRDIGGGGEYIPQTGFSWSNGAVLAFLEEFGWPEDLKIGCNW  508 (516)
Q Consensus       447 -------~n~~~y~~tG~m~EKYdv~~~g~~GgGGEY~~Q~GFGWTNGV~L~ll~~yg~~~~~~~~c~~  508 (516)
                             +|+++|++||.|+|||||.++|..|+||||++|+||||||||+|+||+.||..++. .+|.+
T Consensus       440 la~~~l~~~~~~~~~tg~~~EkYd~~~~g~~G~ggey~~q~gFGWTngv~L~ll~~~~~~~~~-~~~~~  507 (511)
T d2jg0a1         440 ISWHFLTNVQHTYDREKKLVEKYDVSTTGTGGGGGEYPLQDGFGWTNGVTLKMLDLICPKEQP-CDNVP  507 (511)
T ss_dssp             HHHHHHHHHHHHHHHHSSCBSCEETTSSSCBCCCSSSCCCBSCHHHHHHHHHHHHHHSCSSSC-CSSCC
T ss_pred             HHHHHHHHHHHHhhhCCceEEeeCCCCCCCCCCCCCCCCCCCCchHHHHHHHHHHhhCccccC-CCCCC
Confidence                   67889999999999999999999999999999999999999999999999987555 35543

PyMOL of d2jg0a1

>d1v7wa1 a.102.1.4 (A:271-801) Chitobiose phosphorylase ChbP {Vibrio proteolyticus [TaxId: 671]}	Back information, alignment and structure

>d1lf6a1 a.102.1.5 (A:288-684) Bacterial glucoamylase, C-terminal domain {Thermoanaerobacterium thermosaccharolyticum [TaxId: 1517]}	Back information, alignment and structure

>d2p0va1 a.102.1.8 (A:39-481) Hypothetical protein BT3781 {Bacteroides thetaiotaomicron [TaxId: 818]}	Back information, alignment and structure

>d2nvpa1 a.102.1.8 (A:2-427) Hypothetical protein CPF0428 {Clostridium perfringens [TaxId: 1502]}	Back information, alignment and structure

>d1ulva1 a.102.1.5 (A:274-686) Glucodextranase, domain A {Arthrobacter globiformis [TaxId: 1665]}	Back information, alignment and structure