Citrus Sinensis ID: 041177

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------
MTKKAVLIGINYPGTKAELKGCVNDVKRMYACLVDRYGFSEENITVLIDTDDRSTQPTGRNIRRALGNLVRSAEPGDVLFVHYSGHGTRLPAETGEDDDTGYDECIVPSDMNLITDDDFREFVDQIPPGCEITVVSDSCHSGGLIDEAKEQIGESTRRDEEEESGSGFNFKSFLHKKVENAFESRGIHIPSGLRHHRPSGDEDVEDREVEAGYGEGGYHKNKSLPLSTLIEILKQQTGKDDIDVGKIRPTLFDMFGEDATPKVKKFMKVLLNKLKQGDGESGGGGFLGMVGSLAQEFLKHKLEESDESYAKPALETEVGSKKDVYAGGSKRSLPDGGILVSGCQTDQTSADASPSGKASEAYGALSNAIQIIIAESDGAVTNRELVLSTRQMLKKQGFTQQPGLYCHDNHVDKPFIC
cccEEEEEEEccccccccccccHHHHHHHHHHHHHHcccccccEEEEccccccccccHHHHHHHHHHHHHHHcccccEEEEEEccccccccccccccccccccccccccccccccHHHHHHHHHHcccccEEEEEEccccccccccHHHHHccccccccccccccccccHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHcccccccccccccccHHHHHHHHHHHHccccccccccHHHHHHHHcccccHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHcccccccccccHHHHcccccccccccccccccccccEEccccccccccccccccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHcccccccccccccccccccccc
cccEEEEEEEccccccHHHcccHHHHHHHHHHHHHHccccHHcEEEEEccccccccccHHHHHHHHHHHHHccccccEEEEEEccccccccccccccccccccEEEEEccHHHEccHHHHHHHcccccccEEEEEEEcccccccccccEEEcccccccccccHHHHcHHHHHHHHHHHcccHHHHHHHHHHHHHHccccccccHcccccccccccEEEEccccccHHHHHHHHHHHccccccccccHHHHHHHHHcccccHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHcccccHHHccHHHHHccccccccccccccccccccEEEEEcccccccccccccccccccHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHcccccccccEEccccccccEcc
MTKKAVLIGINYPGTKAELKGCVNDVKRMYACLVDrygfseenitvlidtddrstqptgRNIRRALGnlvrsaepgdvlfvhysghgtrlpaetgedddtgydecivpsdmnlitdddfrefvdqippgceitvvsdschsgglidEAKEQigestrrdeeeesgsgfnfkSFLHKKVENAFesrgihipsglrhhrpsgdedvedreveagygeggyhknkslpLSTLIEILKQqtgkddidvgkirptlfdmfgedatpKVKKFMKVLLNKLkqgdgesggggfLGMVGSLAQEFLKHKLeesdesyakpaletevgskkdvyaggskrslpdggilvsgcqtdqtsadaspsgkaseAYGALSNAIQIIIAESDGAVTNRELVLSTRQMLKkqgftqqpglychdnhvdkpfic
mtkkavliginypgtkaelkgcVNDVKRMYACLVDRYgfseenitvlidtddrstqptgRNIRRALGNLVRSAEPGDVLFVHYSghgtrlpaetgedddtgYDECIVPSDMNLITDDDFREFVDQIPPGCEITVVSDSCHSGGLIDEAkeqigestrrdeeeesgsgfnfksfLHKKVENAFESrgihipsglrhhrpsgdedVEDREVEAGygeggyhknkslpLSTLIEILKQqtgkddidvgkIRPTLFdmfgedatpKVKKFMKVLLNKLKQGDGESGGGGFLGMVGSLAQEFLKHKLEESdesyakpaletevgskkdvyAGGSKRSLPDGGILVSGCQTDQTSADASPSGKASEAYGALSNAIQIIIAESDGAVTNRELVLSTRQMLKKqgftqqpglychdnhvDKPFIC
MTKKAVLIGINYPGTKAELKGCVNDVKRMYACLVDRYGFSEENITVLIDTDDRSTQPTGRNIRRALGNLVRSAEPGDVLFVHYSGHGTRLPAetgedddtgydeCIVPSDMNLITDDDFREFVDQIPPGCEITVVSDSCHSGGLIDEAKEQIGESTRRDEEEESGSGFNFKSFLHKKVENAFESRGIHIPSGLRHHRPSGDEDVEDREVEAGYGEGGYHKNKSLPLSTLIEILKQQTGKDDIDVGKIRPTLFDMFGEDATPKVKKFMKVLLNKLKQgdgesggggflgmvgSLAQEFLKHKLEESDESYAKPALETEVGSKKDVYAGGSKRSLPDGGILVSGCQTDQTSADASPSGKASEAYGALSNAIQIIIAESDGAVTNRELVLSTRQMLKKQGFTQQPGLYCHDNHVDKPFIC
****AVLIGINYPGTKAELKGCVNDVKRMYACLVDRYGFSEENITVLIDT***********IRRALGNLVRSAEPGDVLFVHYSGHGTRL*********TGYDECIVPSDMNLITDDDFREFVDQIPPGCEITVVSDSCHSGGL****************************FL*************************************************LPLSTLIEILKQQTGKDDIDVGKIRPTLFDMFGEDATPKVKKFMKVLLNKLK*******GGGFLGMVGSLAQEFL***************************************************************YGALSNAIQIIIAESDGAVTNRELVLSTRQMLKKQGFTQQPGLYCHDNHV******
MTKKAVLIGINYPGTKAELKGCVNDVKRMYACLVDRYGFSEENITVLIDTDDRSTQPTGRNIRRALGNLVRSAEPGDVLFVHYSGHGTRLPAETGEDDDTGYDECIVPSDMNLITDDDFREFVDQIPPGCEITVVSDSCHSGGLID***************************************************PS****VEDREVEAGYGEGGYHKNKSLPLSTLIEILKQQTGKDDIDVGKIRPTLFDMFGEDATPKVKKFMKV***********************LAQ****************************************GGILVSGCQTDQTSADASPSGKASEAYGALSNAIQIIIAESDGAVTNRELVLSTRQMLKKQGFTQQPGLYCHDNHVDKPFIC
MTKKAVLIGINYPGTKAELKGCVNDVKRMYACLVDRYGFSEENITVLIDTDDRSTQPTGRNIRRALGNLVRSAEPGDVLFVHYSGHGTRLPAETGEDDDTGYDECIVPSDMNLITDDDFREFVDQIPPGCEITVVSDSCHSGGLIDEAKEQ**************SGFNFKSFLHKKVENAFESRGIHIPSGLRHHRPSGDEDVEDREVEAGYGEGGYHKNKSLPLSTLIEILKQQTGKDDIDVGKIRPTLFDMFGEDATPKVKKFMKVLLNKLKQGDGESGGGGFLGMVGSLAQEFLKHKLEESDESYAKPALETEVGSKKDVYAGGSKRSLPDGGILVSGCQ*****************YGALSNAIQIIIAESDGAVTNRELVLSTRQMLKKQGFTQQPGLYCHDNHVDKPFIC
*TKKAVLIGINYPGTKAELKGCVNDVKRMYACLVDRYGFSEENITVLIDTDDRSTQPTGRNIRRALGNLVRSAEPGDVLFVHYSGHGTRLPAETGEDDDTGYDECIVPSDMNLITDDDFREFVDQIPPGCEITVVSDSCHSGGLIDEAKEQIGESTRRDEEEESGSGFNFKSFLHKKVENAFESRGIHIPSGLRHHR***********VEAGYGEGGYHKNKSLPLSTLIEILKQQTGKDDIDVGKIRPTLFDMFGEDATPKVKKFMKVLLNKLKQGDGESGGGGFLGMVGSLAQEFLKHKLEESDESYAKPALETEVGSKKDVYAGGSKRSLPDGGILVSGCQTDQTSADAS***KASEAYGALSNAIQIIIAESDGAVTNRELVLSTRQMLKKQGFTQQPGLYCHDNHVDKPFIC
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MTKKAVLIGINYPGTKAELKGCVNDVKRMYACLVDRYGFSEENITVLIDTDDRSTQPTGRNIRRALGNLVRSAEPGDVLFVHYSGHGTRLPAETGEDDDTGYDECIVPSDMNLITDDDFREFVDQIPPGCEITVVSDSCHSGGLIDEAKEQIGESTRRDEEEESGSGFNFKSFLHKKVENAFESRGIHIPSGLRHHRPSGDEDVEDREVEAGYGEGGYHKNKSLPLSTLIEILKQQTGKDDIDVGKIRPTLFDMFGEDATPKVKKFMKVLLNKLKQGDGESGGGGFLGMVGSLAQEFLKHKLEESDESYAKPALETEVGSKKDVYAGGSKRSLPDGGILVSGCQTDQTSADASPSGKASEAYGALSNAIQIIIAESDGAVTNRELVLSTRQMLKKQGFTQQPGLYCHDNHVDKPFIC
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query417 2.2.26 [Sep-21-2011]
O64517418 Metacaspase-4 OS=Arabidop yes no 0.985 0.983 0.681 1e-166
O64518410 Metacaspase-5 OS=Arabidop no no 0.978 0.995 0.665 1e-160
O64519368 Metacaspase-6 OS=Arabidop no no 0.877 0.994 0.584 1e-133
Q6XPT5403 Metacaspase-7 OS=Arabidop no no 0.949 0.982 0.566 1e-131
Q9SA41381 Metacaspase-8 OS=Arabidop no no 0.877 0.960 0.410 8e-83
Q9FYE1325 Metacaspase-9 OS=Arabidop no no 0.750 0.963 0.357 4e-58
A3LSY7403 Metacaspase-1 OS=Scheffer yes no 0.342 0.354 0.469 1e-30
A1CQZ0429 Metacaspase-1A OS=Aspergi N/A no 0.342 0.333 0.436 5e-30
A1D3V4435 Metacaspase-1A OS=Neosart N/A no 0.342 0.328 0.442 9e-30
Q4WJA1413 Metacaspase-1A OS=Neosart yes no 0.342 0.346 0.442 2e-29
>sp|O64517|MCA4_ARATH Metacaspase-4 OS=Arabidopsis thaliana GN=AMC4 PE=1 SV=1 Back     alignment and function desciption
 Score =  585 bits (1509), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 289/424 (68%), Positives = 349/424 (82%), Gaps = 13/424 (3%)

Query: 1   MTKKAVLIGINYPGTKAELKGCVNDVKRMYACLVDRYGFSEENITVLIDTDDRSTQPTGR 60
           MTKKAVLIGINYPGTKAEL+GCVNDV+RMY CLV+RYGFSEENITVLIDTD+ STQPTG+
Sbjct: 1   MTKKAVLIGINYPGTKAELRGCVNDVRRMYKCLVERYGFSEENITVLIDTDESSTQPTGK 60

Query: 61  NIRRALGNLVRSAEPGDVLFVHYSGHGTRLPAETGEDDDTGYDECIVPSDMNLITDDDFR 120
           NIRRAL +LV SA+ GDVL VHYSGHGTRLPAETGEDDDTG+DECIVP DMNLITDDDFR
Sbjct: 61  NIRRALADLVESADSGDVLVVHYSGHGTRLPAETGEDDDTGFDECIVPCDMNLITDDDFR 120

Query: 121 EFVDQIPPGCEITVVSDSCHSGGLIDEAKEQIGESTRRDEEEESGSG-----FNFKSFLH 175
           + VD++PPGC +T++SDSCHSGGLIDEAKEQIGEST+++ E+E  S      F F+ FL 
Sbjct: 121 DLVDKVPPGCRMTIISDSCHSGGLIDEAKEQIGESTKKEAEDEDESEESSSRFGFRKFLR 180

Query: 176 KKVENAFESRGIHIPSGLRHHRPSGDEDVEDREVEAGYGEGGYHKNKSLPLSTLIEILKQ 235
            KVE A ESRG HI    +    +  E++E +E+E   GE  + K+KSLPL TLI+ILKQ
Sbjct: 181 SKVEGAIESRGFHIGGNKKDEDEA--EEIETKEIELEDGETIHAKDKSLPLQTLIDILKQ 238

Query: 236 QTGKDDIDVGKIRPTLFDMFGEDATPKVKKFMKVLLNKLKQGDGESGGGGFLGMVGSLAQ 295
           QTG D+I+VGKIRP+LFD FG+D++PKVKKFMKV+L KL+ G+GE   GG +GM+G LA 
Sbjct: 239 QTGNDNIEVGKIRPSLFDAFGDDSSPKVKKFMKVILGKLQAGNGEE--GGLMGMLGKLAS 296

Query: 296 EFLKHKLEESDESYAKPALETEVGSKKDVYAGGSKRS--LPDGGILVSGCQTDQTSADAS 353
            FL+ KL  +DE Y KPA++T VGSK++VYAGGS+ S  LPD GIL+SGCQTDQTSADA+
Sbjct: 297 GFLEGKL--NDEDYVKPAMQTHVGSKEEVYAGGSRGSVPLPDSGILISGCQTDQTSADAT 354

Query: 354 PSGKASEAYGALSNAIQIIIAESDGAVTNRELVLSTRQMLKKQGFTQQPGLYCHDNHVDK 413
           P+GK +EAYGA+SN+IQ I+ E+DG ++NRE+V   R+ LKKQGFTQQPGLYCHD + + 
Sbjct: 355 PAGKPTEAYGAMSNSIQTILEETDGEISNREMVTRARKALKKQGFTQQPGLYCHDGYANA 414

Query: 414 PFIC 417
           PFIC
Sbjct: 415 PFIC 418
Cysteine protease that cleaves specifically after arginine or lysine residues. Does not cleave caspase-specific substrates. Plays a positive regulatory role in biotic and abiotic stress-induced programmed cell death.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 4EC: .EC: 2EC: 2EC: .EC: -
>sp|O64518|MCA5_ARATH Metacaspase-5 OS=Arabidopsis thaliana GN=AMC5 PE=1 SV=1 Back     alignment and function description
>sp|O64519|MCA6_ARATH Metacaspase-6 OS=Arabidopsis thaliana GN=AMC6 PE=1 SV=1 Back     alignment and function description
>sp|Q6XPT5|MCA7_ARATH Metacaspase-7 OS=Arabidopsis thaliana GN=AMC7 PE=1 SV=1 Back     alignment and function description
>sp|Q9SA41|MCA8_ARATH Metacaspase-8 OS=Arabidopsis thaliana GN=AMC8 PE=1 SV=1 Back     alignment and function description
>sp|Q9FYE1|MCA9_ARATH Metacaspase-9 OS=Arabidopsis thaliana GN=AMC9 PE=1 SV=1 Back     alignment and function description
>sp|A3LSY7|MCA1_PICST Metacaspase-1 OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) GN=MCA1 PE=3 SV=1 Back     alignment and function description
>sp|A1CQZ0|MCA1A_ASPCL Metacaspase-1A OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=casA PE=3 SV=2 Back     alignment and function description
>sp|A1D3V4|MCA1A_NEOFI Metacaspase-1A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=casA PE=3 SV=2 Back     alignment and function description
>sp|Q4WJA1|MCA1A_ASPFU Metacaspase-1A OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=casA PE=3 SV=3 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query417
255555582419 caspase, putative [Ricinus communis] gi| 0.997 0.992 0.795 0.0
305387431417 type II metacaspase [Hevea brasiliensis] 0.997 0.997 0.813 0.0
4235430417 latex-abundant protein [Hevea brasiliens 0.997 0.997 0.811 0.0
359494652424 PREDICTED: metacaspase-5-like isoform 2 1.0 0.983 0.748 1e-180
449444384421 PREDICTED: metacaspase-5-like [Cucumis s 1.0 0.990 0.714 1e-179
449475749421 PREDICTED: metacaspase-4-like [Cucumis s 1.0 0.990 0.714 1e-179
224112341422 predicted protein [Populus trichocarpa] 0.997 0.985 0.765 1e-179
224098816416 predicted protein [Populus trichocarpa] 0.997 1.0 0.745 1e-175
195963550416 metacaspase type II [Nicotiana tabacum] 0.988 0.990 0.723 1e-172
356556698415 PREDICTED: metacaspase-4-like [Glycine m 0.995 1.0 0.738 1e-168
>gi|255555582|ref|XP_002518827.1| caspase, putative [Ricinus communis] gi|223542000|gb|EEF43545.1| caspase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  681 bits (1757), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 334/420 (79%), Positives = 372/420 (88%), Gaps = 4/420 (0%)

Query: 1   MTKKAVLIGINYPGTKAELKGCVNDVKRMYACLVDRYGFSEENITVLIDTDDRSTQPTGR 60
           MTKKAVLIG NYPGTKAELKGC+NDV+RMY CLVDRYGFSEENITVLIDTD+  TQPTG+
Sbjct: 1   MTKKAVLIGCNYPGTKAELKGCINDVRRMYKCLVDRYGFSEENITVLIDTDESYTQPTGK 60

Query: 61  NIRRALGNLVRSAEPGDVLFVHYSGHGTRLPAETGEDDDTGYDECIVPSDMNLITDDDFR 120
           NIR+A+G+LVRSAEPGDVLFVHYSGHGTRLPAETGEDDDTGYDECIVP DMNLITDDDFR
Sbjct: 61  NIRKAVGDLVRSAEPGDVLFVHYSGHGTRLPAETGEDDDTGYDECIVPCDMNLITDDDFR 120

Query: 121 EFVDQIPPGCEITVVSDSCHSGGLIDEAKEQIGESTRRDEEEESGSGFNFKSFLHKKVEN 180
           +FVDQIP GC ITVVSDSCHSGGLIDEAKEQIGES    +E+ S SGF FKSFLH+ V+ 
Sbjct: 121 DFVDQIPEGCRITVVSDSCHSGGLIDEAKEQIGESIIS-QEKVSDSGFGFKSFLHQTVQG 179

Query: 181 AFESRGIHIPSGLRHHRPSG---DEDVEDREVEAGYGEGGYHKNKSLPLSTLIEILKQQT 237
           A ESRGIH+PS L+H        DED +DR VE    E GY K+KSLPLSTLIE+LKQ+T
Sbjct: 180 ALESRGIHLPSELQHRHHRHHRYDEDTDDRVVEGDCSEYGYVKSKSLPLSTLIEMLKQKT 239

Query: 238 GKDDIDVGKIRPTLFDMFGEDATPKVKKFMKVLLNKLKQGDGESGGGGFLGMVGSLAQEF 297
           GKDDIDVGK+RPTLFD+FGEDA+PKVKKF+KV+L+KL+ GDGESG GGFLGMVGSLAQEF
Sbjct: 240 GKDDIDVGKLRPTLFDVFGEDASPKVKKFVKVILDKLQHGDGESGSGGFLGMVGSLAQEF 299

Query: 298 LKHKLEESDESYAKPALETEVGSKKDVYAGGSKRSLPDGGILVSGCQTDQTSADASPSGK 357
           LKHKL+E+DE YAKPA++TEVGSK+DVYAG +KRSLPDGGIL+SGCQ+DQTSADASPSG 
Sbjct: 300 LKHKLDENDEGYAKPAMDTEVGSKQDVYAGANKRSLPDGGILISGCQSDQTSADASPSGN 359

Query: 358 ASEAYGALSNAIQIIIAESDGAVTNRELVLSTRQMLKKQGFTQQPGLYCHDNHVDKPFIC 417
           AS AYGALSNAIQ IIAE+DG +TN+ELVL  R MLKKQGFTQ+PGLYC D HVD PF+C
Sbjct: 360 ASAAYGALSNAIQTIIAETDGEITNQELVLRARNMLKKQGFTQRPGLYCCDYHVDAPFVC 419

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|305387431|gb|ADM52185.1| type II metacaspase [Hevea brasiliensis] Back     alignment and taxonomy information
>gi|4235430|gb|AAD13216.1| latex-abundant protein [Hevea brasiliensis] Back     alignment and taxonomy information
>gi|359494652|ref|XP_002267780.2| PREDICTED: metacaspase-5-like isoform 2 [Vitis vinifera] Back     alignment and taxonomy information
>gi|449444384|ref|XP_004139955.1| PREDICTED: metacaspase-5-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449475749|ref|XP_004154541.1| PREDICTED: metacaspase-4-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|224112341|ref|XP_002316158.1| predicted protein [Populus trichocarpa] gi|222865198|gb|EEF02329.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224098816|ref|XP_002311278.1| predicted protein [Populus trichocarpa] gi|118487358|gb|ABK95507.1| unknown [Populus trichocarpa] gi|222851098|gb|EEE88645.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|195963550|gb|ACG59943.1| metacaspase type II [Nicotiana tabacum] Back     alignment and taxonomy information
>gi|356556698|ref|XP_003546660.1| PREDICTED: metacaspase-4-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query417
TAIR|locus:2207350418 MC4 "metacaspase 4" [Arabidops 0.985 0.983 0.643 1.1e-142
TAIR|locus:2207430410 MC5 "metacaspase 5" [Arabidops 0.978 0.995 0.618 3e-133
TAIR|locus:2207440368 MC6 "metacaspase 6" [Arabidops 0.405 0.459 0.674 6e-116
TAIR|locus:2207450403 MC7 "metacaspase 7" [Arabidops 0.949 0.982 0.535 2e-111
TAIR|locus:2032905381 MC8 "metacaspase 8" [Arabidops 0.642 0.703 0.436 2.2e-78
TAIR|locus:2146648325 MC9 "metacaspase 9" [Arabidops 0.371 0.476 0.518 2.1e-63
POMBASE|SPCC1840.04425 pca1 "metacaspase Pca1" [Schiz 0.342 0.336 0.409 2e-31
UNIPROTKB|A4QTY2396 MCA1 "Metacaspase-1" [Magnapor 0.342 0.361 0.395 1.8e-25
ASPGD|ASPL0000043471420 AN2503 [Emericella nidulans (t 0.342 0.340 0.389 4.8e-24
CGD|CAL0003470448 MCA1 [Candida albicans (taxid: 0.338 0.314 0.419 6.7e-24
TAIR|locus:2207350 MC4 "metacaspase 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1395 (496.1 bits), Expect = 1.1e-142, P = 1.1e-142
 Identities = 273/424 (64%), Positives = 327/424 (77%)

Query:     1 MTKKAVLIGINYPGTKAELKGCVNDVKRMYACLVDRYGFSEENITVLIDTDDRSTQPTGR 60
             MTKKAVLIGINYPGTKAEL+GCVNDV+RMY CLV+RYGFSEENITVLIDTD+ STQPTG+
Sbjct:     1 MTKKAVLIGINYPGTKAELRGCVNDVRRMYKCLVERYGFSEENITVLIDTDESSTQPTGK 60

Query:    61 NIRRALGNLVRSAEPGDVLFVHYSGHGTRLPAXXXXXXXXXXXXCIVPSDMNLITDDDFR 120
             NIRRAL +LV SA+ GDVL VHYSGHGTRLPA            CIVP DMNLITDDDFR
Sbjct:    61 NIRRALADLVESADSGDVLVVHYSGHGTRLPAETGEDDDTGFDECIVPCDMNLITDDDFR 120

Query:   121 EFVDQIPPGCEITVVSDSCHSGGLIDEAKEQIGESTRR-----DEEEESGSGFNFKSFLH 175
             + VD++PPGC +T++SDSCHSGGLIDEAKEQIGEST++     DE EES S F F+ FL 
Sbjct:   121 DLVDKVPPGCRMTIISDSCHSGGLIDEAKEQIGESTKKEAEDEDESEESSSRFGFRKFLR 180

Query:   176 KKVENAFESRGIHIPSGLRHHRPSGDEDVEDREVEAGYGEGGYHKNKSLPLSTLIEILKQ 235
              KVE A ESRG HI    +    +  E++E +E+E   GE  + K+KSLPL TLI+ILKQ
Sbjct:   181 SKVEGAIESRGFHIGGNKKDEDEA--EEIETKEIELEDGETIHAKDKSLPLQTLIDILKQ 238

Query:   236 QTGKDDIDVGKIRPTLFDMFGEDATPKVKKFMKVLLNKLKQXXXXXXXXXXXXXXXSLAQ 295
             QTG D+I+VGKIRP+LFD FG+D++PKVKKFMKV+L KL+                 LA 
Sbjct:   239 QTGNDNIEVGKIRPSLFDAFGDDSSPKVKKFMKVILGKLQ--AGNGEEGGLMGMLGKLAS 296

Query:   296 EFLKHKLEESDESYAKPALETEVGSKKDVYAGGSKRS--LPDGGILVSGCQTDQTSADAS 353
              FL+ KL  +DE Y KPA++T VGSK++VYAGGS+ S  LPD GIL+SGCQTDQTSADA+
Sbjct:   297 GFLEGKL--NDEDYVKPAMQTHVGSKEEVYAGGSRGSVPLPDSGILISGCQTDQTSADAT 354

Query:   354 PSGKASEAYGALSNAIQIIIAESDGAVTNRELVLSTRQMLKKQGFTQQPGLYCHDNHVDK 413
             P+GK +EAYGA+SN+IQ I+ E+DG ++NRE+V   R+ LKKQGFTQQPGLYCHD + + 
Sbjct:   355 PAGKPTEAYGAMSNSIQTILEETDGEISNREMVTRARKALKKQGFTQQPGLYCHDGYANA 414

Query:   414 PFIC 417
             PFIC
Sbjct:   415 PFIC 418
GO:0005576 "extracellular region" evidence=ISM
GO:0006508 "proteolysis" evidence=IEA
GO:0008234 "cysteine-type peptidase activity" evidence=IDA
GO:0005886 "plasma membrane" evidence=IDA
GO:0005829 "cytosol" evidence=IDA
GO:0004197 "cysteine-type endopeptidase activity" evidence=IDA
GO:0016540 "protein autoprocessing" evidence=IDA
GO:0042802 "identical protein binding" evidence=IPI
GO:0043068 "positive regulation of programmed cell death" evidence=IMP;IDA
GO:0005737 "cytoplasm" evidence=IDA
GO:0009506 "plasmodesma" evidence=IDA
GO:0006816 "calcium ion transport" evidence=RCA
GO:0006970 "response to osmotic stress" evidence=RCA
GO:0007030 "Golgi organization" evidence=RCA
GO:0007033 "vacuole organization" evidence=RCA
GO:0009611 "response to wounding" evidence=RCA
GO:0009651 "response to salt stress" evidence=RCA
GO:0009805 "coumarin biosynthetic process" evidence=RCA
GO:0010167 "response to nitrate" evidence=RCA
GO:0015706 "nitrate transport" evidence=RCA
GO:0046686 "response to cadmium ion" evidence=RCA
GO:0048767 "root hair elongation" evidence=RCA
TAIR|locus:2207430 MC5 "metacaspase 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2207440 MC6 "metacaspase 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2207450 MC7 "metacaspase 7" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2032905 MC8 "metacaspase 8" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2146648 MC9 "metacaspase 9" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
POMBASE|SPCC1840.04 pca1 "metacaspase Pca1" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms
UNIPROTKB|A4QTY2 MCA1 "Metacaspase-1" [Magnaporthe oryzae 70-15 (taxid:242507)] Back     alignment and assigned GO terms
ASPGD|ASPL0000043471 AN2503 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
CGD|CAL0003470 MCA1 [Candida albicans (taxid:5476)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O64517MCA4_ARATH3, ., 4, ., 2, 2, ., -0.68160.98560.9832yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.4.220.691

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query417
pfam00656228 pfam00656, Peptidase_C14, Caspase domain 1e-37
pfam00656228 pfam00656, Peptidase_C14, Caspase domain 2e-04
>gnl|CDD|216047 pfam00656, Peptidase_C14, Caspase domain Back     alignment and domain information 
 Score =  135 bits (343), Expect = 1e-37
 Identities = 53/165 (32%), Positives = 68/165 (41%), Gaps = 21/165 (12%)

Query: 3   KKAVLIGINYPGTKAELKGCVNDVKRMYACLVDRYGFSEENITVLIDTDDRSTQPTGRNI 62
             A++IG NY G  A L+GC ND + +   L  R GF  E        DD     T   I
Sbjct: 1   GLALIIGNNYFGHAAPLRGCDNDAEALAKLL-QRLGFEVEVF------DD----LTAEEI 49

Query: 63  RRALGNLVRSAEPGDVLFVHYSGHGTRLPAETGEDDDTGYDECIVPSDMNLITDDDFREF 122
           RRAL      A+PGD   V YSGHG        + +  G D  +VP D     DD F   
Sbjct: 50  RRALREFAARADPGDSFVVVYSGHGV-------QGEVYGGDGYLVPVDA---LDDVFNGL 99

Query: 123 VDQIPPGCEITVVSDSCHSGGLIDEAKEQIGESTRRDEEEESGSG 167
                 G     + D+C  G L D  K   G S   +  ++S + 
Sbjct: 100 NCPSLKGKPKLFIIDACRGGPLDDGVKSDSGSSGESESVDDSEAA 144

Length = 228
>gnl|CDD|216047 pfam00656, Peptidase_C14, Caspase domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 417
KOG1546362 consensus Metacaspase involved in regulation of ap 100.0
PF00656248 Peptidase_C14: Caspase domain; InterPro: IPR011600 99.97
cd00032243 CASc Caspase, interleukin-1 beta converting enzyme 99.53
smart00115241 CASc Caspase, interleukin-1 beta converting enzyme 99.48
PF01650256 Peptidase_C13: Peptidase C13 family; InterPro: IPR 99.13
COG4249380 Uncharacterized protein containing caspase domain 99.12
COG4249380 Uncharacterized protein containing caspase domain 98.53
PF14538154 Raptor_N: Raptor N-terminal CASPase like domain 98.21
KOG1348477 consensus Asparaginyl peptidases [Posttranslationa 98.0
KOG1349309 consensus Gpi-anchor transamidase [Posttranslation 97.5
COG5206382 GPI8 Glycosylphosphatidylinositol transamidase (GP 96.5
PF12770287 CHAT: CHAT domain 95.99
KOG1517 1387 consensus Guanine nucleotide binding protein MIP1 91.26
>KOG1546 consensus Metacaspase involved in regulation of apoptosis [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information 
Probab=100.00  E-value=1.1e-78  Score=592.58  Aligned_cols=295  Identities=57%  Similarity=0.924  Sum_probs=269.9

Q ss_pred             CCeEEEEEeeCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCccEEEeecCCCCC-CCCcHHHHHHHHHHHHHhCCCCCEE
Q 041177            1 MTKKAVLIGINYPGTKAELKGCVNDVKRMYACLVDRYGFSEENITVLIDTDDRS-TQPTGRNIRRALGNLVRSAEPGDVL   79 (417)
Q Consensus         1 g~r~ALlIGINY~~~~~~L~g~~nDa~~m~~~L~~~~Gf~~~dI~vL~D~~~~~-~~pTr~nI~~aL~~Lv~~a~pgD~l   79 (417)
                      |||+||||||||+++..+|+||+|||+.|+++|.++|||++++|++|+|++.+. .+||++||++||+|||+.+++||+|
T Consensus        62 gkrrAvLiGINY~gTk~ELrGCINDv~~M~~~Lv~rfGFs~ddI~~LtDt~~s~~~~PT~~Nir~Al~wLV~~aq~gD~L  141 (362)
T KOG1546|consen   62 GKRRAVLIGINYPGTKNELRGCINDVHRMRKLLVERFGFSEDDILMLTDTDESPVRIPTGKNIRRALRWLVESAQPGDSL  141 (362)
T ss_pred             ccceEEEEeecCCCcHHHHhhhHHHHHHHHHHHHHhhCCChhheEEEecCCCcccccCcHHHHHHHHHHHHhcCCCCCEE
Confidence            578999999999999999999999999999999999999999999999988766 7899999999999999999999999


Q ss_pred             EEEeeCCCCCCCCCCCCCCCCCCcceeecCCCC----CCCHHHHHHHHHhCCCCCeEEEEEeCCCCCcCCccchhhcCCC
Q 041177           80 FVHYSGHGTRLPAETGEDDDTGYDECIVPSDMN----LITDDDFREFVDQIPPGCEITVVSDSCHSGGLIDEAKEQIGES  155 (417)
Q Consensus        80 ~fYFSGHG~~~~d~~G~de~dG~de~lvP~D~~----~Is~~el~~ll~~l~~g~~l~iILDcChSG~~~d~~~~~ig~s  155 (417)
                      ||||||||.+.++.+| ||.+||||+|||+|++    .|+|++++.||+++|.|+++++|+|+||||+++|.++..   .
T Consensus       142 vfHYSGHGtr~~~~~g-De~dG~DE~I~P~D~~t~G~iIdDe~~r~lV~plp~G~~lt~I~DSCHSGgliDlp~i~---~  217 (362)
T KOG1546|consen  142 VFHYSGHGTRQPDTNG-DEVDGYDETIVPCDHNTQGPIIDDEIFRILVRPLPKGCKLTAISDSCHSGGLIDLPEIE---R  217 (362)
T ss_pred             EEEecCCCCcCCCCCC-CCCCCCcceeecccccccccccchHHHHHHHhccCCCceEEEEeecccCCCcccchhhe---e
Confidence            9999999999999888 8999999999999999    789999999999999999999999999999999988762   1


Q ss_pred             cccchhhhcCCCCchhHHHHHHHHHHHHhcCccCCCCCcCCCCCCCCccchhhhhccCCCCCcccCCCCChhHHHHHHHH
Q 041177          156 TRRDEEEESGSGFNFKSFLHKKVENAFESRGIHIPSGLRHHRPSGDEDVEDREVEAGYGEGGYHKNKSLPLSTLIEILKQ  235 (417)
Q Consensus       156 t~~~~e~e~~g~g~FT~~L~~~L~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~lp~~~~~~~l~~  235 (417)
                                                                                 +++.+|+|++|+++.+++|++
T Consensus       218 -----------------------------------------------------------~~~~ir~~~l~~e~~~d~l~~  238 (362)
T KOG1546|consen  218 -----------------------------------------------------------TKGVIRNRNLPWEDHRDLLKA  238 (362)
T ss_pred             -----------------------------------------------------------cccccccCccchHHhHHHHHh
Confidence                                                                       233689999999999999999


Q ss_pred             hhCCCCcccCccccchhhhccCCcchHHHHHHHHHHHhhhcCCCCCCCCCccchhhhhHHHHHhhhcccCccccccccch
Q 041177          236 QTGKDDIDVGKIRPTLFDMFGEDATPKVKKFMKVLLNKLKQGDGESGGGGFLGMVGSLAQEFLKHKLEESDESYAKPALE  315 (417)
Q Consensus       236 ~~g~~~~~~~~i~~~l~~~fg~~as~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (417)
                      .+|.+.+++++|+.+|+++||+|+||. ..+                  .+ +.++                        
T Consensus       239 ~tG~~~ge~~~i~~~l~d~f~~dts~~-~~~------------------~~-~~~~------------------------  274 (362)
T KOG1546|consen  239 QTGTDGGEVGKIRGCLDDIFGEDTSPL-PNG------------------TI-GDLG------------------------  274 (362)
T ss_pred             hcCCCCceeeeeecchhhhhcccCCCC-CCc------------------ch-hhhh------------------------
Confidence            999999999999999999999999981 111                  00 1111                        


Q ss_pred             hccccccccccCCCCCCCCCCeEEeecCCCCCcccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHc
Q 041177          316 TEVGSKKDVYAGGSKRSLPDGGILVSGCQTDQTSADASPSGKASEAYGALSNAIQIIIAESDGAVTNRELVLSTRQMLKK  395 (417)
Q Consensus       316 ~~~~~~~~~~~~~~~~~~~~~~il~SGC~d~qtSaDa~~~g~~~~a~GA~s~a~~~~l~~~~~~~s~~~ll~~~R~~L~~  395 (417)
                                 .+.+.+ ++++||+||||++|||||+...|   ..+||||+||+.+|.++++.+++.+|+.++|..|++
T Consensus       275 -----------~~~~~~-~d~~illSgcqadqtSad~~~~G---~~~gAms~Aiq~i~~~n~g~~~~~~lvl~~~~~~~~  339 (362)
T KOG1546|consen  275 -----------RQLKDS-HDNGILLSGCQADQTSADASTYG---HLYGAMSNAIQEILTENKGRITNKLLVLRARGALKK  339 (362)
T ss_pred             -----------hhcccC-CCCceEEecccccccccccccCC---cchhHHHHHHHHHHhcCcccchhHHHHHHHhhhhhc
Confidence                       122334 79999999999999999999999   889999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCCCccC
Q 041177          396 QGFTQQPGLYCHDNHVDKPFIC  417 (417)
Q Consensus       396 ~~y~Q~PqL~~s~~~~~~~fi~  417 (417)
                      +||+|.|||||||+.++.+|||
T Consensus       340 ~g~sQ~P~L~csd~~~~~~~~~  361 (362)
T KOG1546|consen  340 QGFSQEPGLYCSDPFDVAPFIC  361 (362)
T ss_pred             cCcccCccccCCccccccceec
Confidence            9999999999999999999998

>PF00656 Peptidase_C14: Caspase domain; InterPro: IPR011600 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>cd00032 CASc Caspase, interleukin-1 beta converting enzyme (ICE) homologues; Cysteine-dependent aspartate-directed proteases that mediate programmed cell death (apoptosis) Back     alignment and domain information
>smart00115 CASc Caspase, interleukin-1 beta converting enzyme (ICE) homologues Back     alignment and domain information
>PF01650 Peptidase_C13: Peptidase C13 family; InterPro: IPR001096 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>COG4249 Uncharacterized protein containing caspase domain [General function prediction only] Back     alignment and domain information
>COG4249 Uncharacterized protein containing caspase domain [General function prediction only] Back     alignment and domain information
>PF14538 Raptor_N: Raptor N-terminal CASPase like domain Back     alignment and domain information
>KOG1348 consensus Asparaginyl peptidases [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG1349 consensus Gpi-anchor transamidase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG5206 GPI8 Glycosylphosphatidylinositol transamidase (GPIT), subunit GPI8 [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF12770 CHAT: CHAT domain Back     alignment and domain information
>KOG1517 consensus Guanine nucleotide binding protein MIP1 [Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query417
4afr_A367 The Structure Of Metacaspase 2 (C213a Mutant) From 2e-23
4af8_A367 The Structural Basis For Metacaspase Substrate Spec 2e-23
4afp_A367 The Structure Of Metacaspase 2 From T. Brucei Deter 4e-23
4f6o_A350 Crystal Structure Of The Yeast Metacaspase Yca1 Len 4e-22
3bij_A285 Crystal Structure Of Protein Gsu0716 From Geobacter 2e-04
>pdb|4AFR|A Chain A, The Structure Of Metacaspase 2 (C213a Mutant) From T. Brucei Length = 367 Back     alignment and structure 
Iteration: 1

 Score =  107 bits (266), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 63/152 (41%), Positives = 82/152 (53%), Gaps = 10/152 (6%)
Query: 2   TKKAVLIGINYPGTKAELKGCVNDVKRMYACLVDRYGFSEENITVLIDTDD---RSTQPT 58
           T +A+ IGINY GT A L GC NDVK+M A L  + G       +L+D D+   R+ QPT
Sbjct: 92  TVRALFIGINYYGTSAALSGCCNDVKQMLATL-QKKGLPINEAVILVDEDNFPGRTDQPT 150
Query: 59  GRNIRRALGNLVRSAEPGDVLFVHYSGHGTRLPAXXXXXXXXXXXXCIVPSDMN---LIT 115
             NI R +  LV+ A+PGDVLF HYSGHGT+               CI P D      I 
Sbjct: 151 RDNIVRYMAWLVKDAKPGDVLFFHYSGHGTQ--CKSRGDSDEKYDQCIAPVDFQKSGCIV 208
Query: 116 DDDFREFV-DQIPPGCEITVVSDSCHSGGLID 146
           DDD  + +  ++P    +T V D  HSG ++D
Sbjct: 209 DDDIHKLLFSRLPEKVRLTAVFDCAHSGSIMD 240
>pdb|4AF8|A Chain A, The Structural Basis For Metacaspase Substrate Specificity And Activation Length = 367 Back     alignment and structure
>pdb|4AFP|A Chain A, The Structure Of Metacaspase 2 From T. Brucei Determined In The Presence Of Samarium Length = 367 Back     alignment and structure
>pdb|4F6O|A Chain A, Crystal Structure Of The Yeast Metacaspase Yca1 Length = 350 Back     alignment and structure
>pdb|3BIJ|A Chain A, Crystal Structure Of Protein Gsu0716 From Geobacter Sulfurreducens. Northeast Structural Genomics Target Gsr13 Length = 285 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query417
4f6o_A350 Metacaspase-1; rossmann fold, hydrolase; HET: DFH; 2e-45
4f6o_A350 Metacaspase-1; rossmann fold, hydrolase; HET: DFH; 3e-10
3bij_A285 Uncharacterized protein GSU0716; alpha-beta protei 4e-45
3bij_A285 Uncharacterized protein GSU0716; alpha-beta protei 7e-08
4af8_A367 Metacaspase MCA2; hydrolase, cysteine peptidase, c 2e-44
4af8_A367 Metacaspase MCA2; hydrolase, cysteine peptidase, c 8e-14
3uoa_B390 Mucosa-associated lymphoid tissue lymphoma transl 5e-16
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-05
>4f6o_A Metacaspase-1; rossmann fold, hydrolase; HET: DFH; 1.68A {Saccharomyces cerevisiae} Length = 350 Back     alignment and structure
 Score =  159 bits (403), Expect = 2e-45
 Identities = 59/162 (36%), Positives = 94/162 (58%), Gaps = 6/162 (3%)

Query: 3   KKAVLIGINYPGTKAELKGCVNDVKRMYACLVDRYGFSEENITVLIDT-DDRSTQPTGRN 61
           +KA++IGINY G+K +L+GC+ND   ++  L + YG+S ++I +L D  +D    PT  N
Sbjct: 54  RKALIIGINYIGSKNQLRGCINDAHNIFNFLTNGYGYSSDDIVILTDDQNDLVRVPTRAN 113

Query: 62  IRRALGNLVRSAEPGDVLFVHYSGHGTRLPAETGEDDDTGYDECIVPSDMN----LITDD 117
           + RA+  LV+ A+P D LF+HYSGHG +     G+++D G D+ I P D      +I D+
Sbjct: 114 MIRAMQWLVKDAQPNDSLFLHYSGHGGQTEDLDGDEED-GMDDVIYPVDFETQGPIIDDE 172

Query: 118 DFREFVDQIPPGCEITVVSDSCHSGGLIDEAKEQIGESTRRD 159
                V  +  G  +T + DSCHSG ++D       +   ++
Sbjct: 173 MHDIMVKPLQQGVRLTALFDSCHSGTVLDLPYTYSTKGIIKE 214
>4f6o_A Metacaspase-1; rossmann fold, hydrolase; HET: DFH; 1.68A {Saccharomyces cerevisiae} Length = 350 Back     alignment and structure
>3bij_A Uncharacterized protein GSU0716; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.50A {Geobacter sulfurreducens pca} Length = 285 Back     alignment and structure
>3bij_A Uncharacterized protein GSU0716; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.50A {Geobacter sulfurreducens pca} Length = 285 Back     alignment and structure
>4af8_A Metacaspase MCA2; hydrolase, cysteine peptidase, caspase/hemoglobin fold; 1.40A {Trypanosoma brucei} PDB: 4afp_A 4afv_A 4afr_A Length = 367 Back     alignment and structure
>4af8_A Metacaspase MCA2; hydrolase, cysteine peptidase, caspase/hemoglobin fold; 1.40A {Trypanosoma brucei} PDB: 4afp_A 4afv_A 4afr_A Length = 367 Back     alignment and structure
>3uoa_B Mucosa-associated lymphoid tissue lymphoma transl protein 1; paracaspase, lymphoma, NF-KB signalling, caspase fold, immun fold, hydrolase-hydrolase inhibitor complex; 1.75A {Homo sapiens} PDB: 3uo8_B 3v55_A 3v4l_A* 3v4o_A* Length = 390 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query417
4f6o_A350 Metacaspase-1; rossmann fold, hydrolase; HET: DFH; 100.0
4af8_A367 Metacaspase MCA2; hydrolase, cysteine peptidase, c 100.0
3bij_A285 Uncharacterized protein GSU0716; alpha-beta protei 100.0
3uoa_B390 Mucosa-associated lymphoid tissue lymphoma transl 99.91
2h54_A178 Caspase-1; allosteric site, dimer interface, hydro 99.42
1nw9_B277 Caspase 9, apoptosis-related cysteine protease; XI 99.35
1f1j_A305 Caspase-7 protease; caspase-7, cysteine protease, 99.35
2j32_A250 Caspase-3; Pro-caspase3, thiol protease, hydrolase 99.34
1m72_A272 Caspase-1; caspase, cysteine protease, hydrolase-h 99.33
2nn3_C310 Caspase-1; cysteine protease, hydrolase; 3.00A {Sp 99.29
4ehd_A277 Caspase-3; caspase, apoptosis, allosteric inhibiti 99.26
3sir_A259 Caspase; hydrolase; 2.68A {Drosophila melanogaster 99.24
3od5_A278 Caspase-6; caspase domain, apoptotic protease, hyd 99.2
3h11_B271 Caspase-8; cell death, apoptosis, caspase, alterna 99.16
3e4c_A302 Caspase-1; zymogen, inflammasome, ICE, IL-1B, inna 99.12
2fp3_A316 Caspase NC; apoptosis, initiator caspase activatio 99.06
1pyo_A167 Caspase-2; apoptosis, caspase, alpha-beta, thiol p 98.72
2dko_A146 Caspase-3; low barrier hydrogen bond, caspase, dru 98.54
1qtn_A164 Caspase-8; apoptosis, dithiane-DIOL, caspase, cyst 98.53
2ql9_A173 Caspase-7; cysteine protease, apoptosis, thiol pro 98.19
3p45_A179 Caspase-6; protease, huntington'S disease, physio 98.19
3h11_A272 CAsp8 and FADD-like apoptosis regulator; cell deat 97.64
>4f6o_A Metacaspase-1; rossmann fold, hydrolase; HET: DFH; 1.68A {Saccharomyces cerevisiae} Back     alignment and structure
Probab=100.00  E-value=8.8e-67  Score=524.58  Aligned_cols=293  Identities=31%  Similarity=0.513  Sum_probs=194.8

Q ss_pred             CCeEEEEEeeCCCCCCCCCcchHHHHHHHHHHHHhhcCCCCccEEEeecCCCC-CCCCcHHHHHHHHHHHHHhCCCCCEE
Q 041177            1 MTKKAVLIGINYPGTKAELKGCVNDVKRMYACLVDRYGFSEENITVLIDTDDR-STQPTGRNIRRALGNLVRSAEPGDVL   79 (417)
Q Consensus         1 g~r~ALlIGINY~~~~~~L~g~~nDa~~m~~~L~~~~Gf~~~dI~vL~D~~~~-~~~pTr~nI~~aL~~Lv~~a~pgD~l   79 (417)
                      |+|+|||||||||+...+|++|+|||++|+++|++++||++++|++|+|.... ...||++||+++|+||+++++|+|++
T Consensus        52 grr~ALlIGIn~Y~~~~~L~g~vnDA~~m~~~L~~~~Gf~~~~I~lLtd~~~~~~~~pTr~nI~~aL~~L~~~a~pgD~l  131 (350)
T 4f6o_A           52 GRRKALIIGINYIGSKNQLRGCINDAHNIFNFLTNGYGYSSDDIVILTDDQNDLVRVPTRANMIRAMQWLVKDAQPNDSL  131 (350)
T ss_dssp             SCEEEEEEECCCTTSTTCCSSHHHHHHHHHHHHHHHSCCCGGGEEEEETTSSCGGGSCCHHHHHHHHHHHHTTCCTTCEE
T ss_pred             CCEEEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCccceeeecccccccccCCCHHHHHHHHHHHHHhCCCCCEE
Confidence            68999999999998888999999999999999999899999999999996421 23599999999999999999999999


Q ss_pred             EEEeeCCCCCCCCCCCCCCCCCCcceeecCCCC---CCCHHHHHHHH-HhCCCCCeEEEEEeCCCCCcCCccchhhcCCC
Q 041177           80 FVHYSGHGTRLPAETGEDDDTGYDECIVPSDMN---LITDDDFREFV-DQIPPGCEITVVSDSCHSGGLIDEAKEQIGES  155 (417)
Q Consensus        80 ~fYFSGHG~~~~d~~G~de~dG~de~lvP~D~~---~Is~~el~~ll-~~l~~g~~l~iILDcChSG~~~d~~~~~ig~s  155 (417)
                      ||||||||.++++.+| +|.+||||+|||+|++   .|+++||..+| +.++++++|++||||||||+++|+|+..   +
T Consensus       132 lfYFSGHG~q~~d~~g-dE~dG~De~lvP~D~~~~g~I~ddeL~~~L~~~l~~g~~vt~IlD~ChSGt~ldlp~~~---~  207 (350)
T 4f6o_A          132 FLHYSGHGGQTEDLDG-DEEDGMDDVIYPVDFETQGPIIDDEMHDIMVKPLQQGVRLTALFDSCHSGTVLDLPYTY---S  207 (350)
T ss_dssp             EEEEESCEEEC------------CEEECCTTHHHHCCEEHHHHHHHHTTTCCTTCEEEEEECSSSCTTTTCCSEEE---E
T ss_pred             EEEEcCCceeccCCCC-CcccCCceEEEeccCCcCCcccHHHHHHHHHhhcCCCCeEEEEEccCCCCccccccccc---c
Confidence            9999999999999888 7899999999999985   79999998865 5788899999999999999999999873   2


Q ss_pred             cccchhhhcCCCCchhHHHHHHHHHHHHhcCccCCCCCcCCCCCCCCccchhhhhccCCCCCcccCCCCChhHHHHHHHH
Q 041177          156 TRRDEEEESGSGFNFKSFLHKKVENAFESRGIHIPSGLRHHRPSGDEDVEDREVEAGYGEGGYHKNKSLPLSTLIEILKQ  235 (417)
Q Consensus       156 t~~~~e~e~~g~g~FT~~L~~~L~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~lp~~~~~~~l~~  235 (417)
                      +.+.                                                           +++++++.+.....|  
T Consensus       208 ~~g~-----------------------------------------------------------~~e~~~~~~~~~~~l--  226 (350)
T 4f6o_A          208 TKGI-----------------------------------------------------------IKEPNIWKDVGQDGL--  226 (350)
T ss_dssp             TTEE-----------------------------------------------------------EECCCC-----------
T ss_pred             cccc-----------------------------------------------------------cCcchhhhhcccccc--
Confidence            2211                                                           122221111000000  


Q ss_pred             hhCCCCcccCccccchhhhccCCcchHHHHHHHHHHHhhhcCCCCCCCCCccchhhhhHHHHHhhhcccCccccccccch
Q 041177          236 QTGKDDIDVGKIRPTLFDMFGEDATPKVKKFMKVLLNKLKQGDGESGGGGFLGMVGSLAQEFLKHKLEESDESYAKPALE  315 (417)
Q Consensus       236 ~~g~~~~~~~~i~~~l~~~fg~~as~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (417)
                                       +.           ++     .+..       |.+.|+++++.. +.|....+...        
T Consensus       227 -----------------~~-----------~~-----~~~~-------g~~~~~~~~~~~-~~~~~~~~~~~--------  257 (350)
T 4f6o_A          227 -----------------QA-----------AI-----SYAT-------GNRAALIGSLGS-IFKTVKGGMGN--------  257 (350)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             -----------------ch-----------hh-----hhcc-------ccchhhcccchh-hhhhhcccccc--------
Confidence                             00           00     0111       112222222211 11111110000        


Q ss_pred             hccccccccccCCCCCCCCCCeEEeecCCCCCcccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHc
Q 041177          316 TEVGSKKDVYAGGSKRSLPDGGILVSGCQTDQTSADASPSGKASEAYGALSNAIQIIIAESDGAVTNRELVLSTRQMLKK  395 (417)
Q Consensus       316 ~~~~~~~~~~~~~~~~~~~~~~il~SGC~d~qtSaDa~~~g~~~~a~GA~s~a~~~~l~~~~~~~s~~~ll~~~R~~L~~  395 (417)
                          .....+.++.+++ |+++||||||+|+|||||+.++|   +++|||||||+++|+++|+ +||.+||++||+.|++
T Consensus       258 ----~~~~~~~~~~~~~-~~~vi~~SgCkD~QtSaD~~~~g---~~~GAmTyafi~aL~~~p~-~tY~~Ll~~~r~~L~~  328 (350)
T 4f6o_A          258 ----NVDRERVRQIKFS-AADVVMLSGSKDNQTSADAVEDG---QNTGAMSHAFIKVMTLQPQ-QSYLSLLQNMRKELAG  328 (350)
T ss_dssp             ---------------CC-CSEEEEEEEEC----------------CCCHHHHHHHHHHHHCCC-CBHHHHHHHHHHHHTT
T ss_pred             ----ccchhhhhhccCC-CCCEEEEEecCCCCchhhhccCC---ceeehhHHHHHHHHHHCCC-CCHHHHHHHHHHHHHh
Confidence                0011122344666 99999999999999999999998   9999999999999999986 5999999999999986


Q ss_pred             CCCCCCCCCCCCCC-CCCCCccC
Q 041177          396 QGFTQQPGLYCHDN-HVDKPFIC  417 (417)
Q Consensus       396 ~~y~Q~PqL~~s~~-~~~~~fi~  417 (417)
                       +|+|+|||+||++ |+|++||+
T Consensus       329 -kysQ~PQLs~s~~~d~~~~f~~  350 (350)
T 4f6o_A          329 -KYSQKPQLSSSHPIDVNLQFIM  350 (350)
T ss_dssp             -TCSCEEEEEESSCCCTTSBCCC
T ss_pred             -cCCCCceecccCCCCCCccccC
Confidence             8999999999999 99999996
>4af8_A Metacaspase MCA2; hydrolase, cysteine peptidase, caspase/hemoglobin fold; 1.40A {Trypanosoma brucei} PDB: 4afp_A 4afv_A 4afr_A Back     alignment and structure
>3bij_A Uncharacterized protein GSU0716; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.50A {Geobacter sulfurreducens pca} Back     alignment and structure
>3uoa_B Mucosa-associated lymphoid tissue lymphoma transl protein 1; paracaspase, lymphoma, NF-KB signalling, caspase fold, immun fold, hydrolase-hydrolase inhibitor complex; 1.75A {Homo sapiens} PDB: 3uo8_B 3v55_A 3v4l_A* 3v4o_A* Back     alignment and structure
>2h54_A Caspase-1; allosteric site, dimer interface, hydrolase; HET: PHQ; 1.80A {Homo sapiens} PDB: 1rwm_A* 1rwk_A* 1rwo_A* 1rwp_A* 1rwv_A* 1rww_A* 1rwn_A* 2h48_A* 2h4w_A* 1rwx_A* 2hbq_A* 2hby_A* 1ibc_A 3d6m_A* 2h4y_A* 2h51_A* 3d6f_A* 3d6h_A* 2hbz_A* 2hbr_A* ... Back     alignment and structure
>1nw9_B Caspase 9, apoptosis-related cysteine protease; XIAP, caspase inhibition, caspase activation, dimerization; 2.40A {Homo sapiens} SCOP: c.17.1.1 PDB: 1jxq_A* 2ar9_A Back     alignment and structure
>1f1j_A Caspase-7 protease; caspase-7, cysteine protease, hydrolase, apoptosis, hydrolas hydrolase inhibitor complex; 2.35A {Homo sapiens} SCOP: c.17.1.1 PDB: 1kmc_A 3r5k_A 1i4o_A 1gqf_A 3h1p_A 1shj_A* 1k86_A 1k88_A 1shl_A* Back     alignment and structure
>2j32_A Caspase-3; Pro-caspase3, thiol protease, hydrolase, hydrolase-hydrolase inhibitor complex; 1.30A {Homo sapiens} PDB: 2j30_A 3h0e_A* 2j33_A 3pd1_A 2j31_A 3pcx_A 1nms_A* 1nmq_A* 3deh_A* 3dei_A* 3dej_A* 3dek_A* 3pd0_A 3itn_A 1qx3_A Back     alignment and structure
>1m72_A Caspase-1; caspase, cysteine protease, hydrolase-hydrolase inhibitor CO; 2.30A {Spodoptera frugiperda} SCOP: c.17.1.1 PDB: 3sip_B Back     alignment and structure
>2nn3_C Caspase-1; cysteine protease, hydrolase; 3.00A {Spodoptera frugiperda} Back     alignment and structure
>4ehd_A Caspase-3; caspase, apoptosis, allosteric inhibition; 1.58A {Homo sapiens} PDB: 4ehk_A 4ehf_A 4ehn_A 1cp3_A 4ehh_A 4eha_A 4ehl_A 1i3o_A Back     alignment and structure
>3sir_A Caspase; hydrolase; 2.68A {Drosophila melanogaster} PDB: 3sip_A Back     alignment and structure
>3od5_A Caspase-6; caspase domain, apoptotic protease, hydrolase-hydrolase INHI complex; 1.60A {Homo sapiens} SCOP: c.17.1.0 PDB: 3k7e_A 3s70_A 3v6m_A 3v6l_A 3nr2_A 4fxo_A 2wdp_A 3nkf_A 3s8e_A 4ejf_A 3qnw_A* 3p4u_A* 3p45_B 3qnw_B* 3p4u_B* Back     alignment and structure
>3h11_B Caspase-8; cell death, apoptosis, caspase, alternative splicing, HOST- virus interaction, polymorphism, cytoplasm, disease mutation; 1.90A {Homo sapiens} SCOP: c.17.1.1 PDB: 2k7z_A 1i4e_B 2fun_B 2c2z_B* Back     alignment and structure
>3e4c_A Caspase-1; zymogen, inflammasome, ICE, IL-1B, innate immunity, apoptosis, hydrolase, protease protease; 2.05A {Homo sapiens} Back     alignment and structure
>2fp3_A Caspase NC; apoptosis, initiator caspase activation, dimerization, active site conformation, hydrolysis/apoptosis complex; 2.50A {Drosophila melanogaster} Back     alignment and structure
>1pyo_A Caspase-2; apoptosis, caspase, alpha-beta, thiol protease, hydrolase-HY inhibitor complex; 1.65A {Homo sapiens} SCOP: c.17.1.1 PDB: 3rjm_A* 2p2c_A 3r5j_A 3r6g_A 3r6l_A 3r7b_A 3r7n_A 3r7s_A Back     alignment and structure
>2dko_A Caspase-3; low barrier hydrogen bond, caspase, drug design, radiation D tetrahedral intermediate, protease; 1.06A {Homo sapiens} PDB: 1nme_A 2h5i_A 2h5j_A 2h65_A 2xyg_A* 2xyh_A 2xyp_A* 2xzd_A 2xzt_A 2y0b_A 3edq_A 1gfw_A 1re1_A* 1pau_A* 1rhk_A* 1rhm_A* 1rhq_A* 1rhr_A* 1rhu_A* 1rhj_A* ... Back     alignment and structure
>1qtn_A Caspase-8; apoptosis, dithiane-DIOL, caspase, cysteine-protease, hydrol hydrolase inhibitor complex; 1.20A {Homo sapiens} SCOP: c.17.1.1 PDB: 3kjn_A* 3kjq_A* 2y1l_A 2c2z_A 1qdu_A* 1f9e_A* Back     alignment and structure
>2ql9_A Caspase-7; cysteine protease, apoptosis, thiol protease, zymogen, hydro hydrolase inhibitor complex; HET: CIT; 2.14A {Homo sapiens} PDB: 2ql7_A* 2ql5_A* 2qlb_A* 2qlf_A 2qlj_A* 3edr_A 3ibc_A 3ibf_A 1i51_A Back     alignment and structure
>3p45_A Caspase-6; protease, huntington'S disease, physio PH, competitive inhibition, hydrolase; 2.53A {Homo sapiens} Back     alignment and structure
>3h11_A CAsp8 and FADD-like apoptosis regulator; cell death, apoptosis, caspase, alternative splicing, HOST- virus interaction, polymorphism, cytoplasm, disease mutation; 1.90A {Homo sapiens} PDB: 3h13_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 417
g1sc3.1261 c.17.1.1 (A:,B:) Interleukin-1beta converting enzy 0.002

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query417
d1nw9b_277 Caspase-9 {Human (Homo sapiens) [TaxId: 9606]} 99.8
g1sc3.1261 Interleukin-1beta converting enzyme (a cysteine pr 99.74
g1qtn.1242 Caspase-8 {Human (Homo sapiens) [TaxId: 9606]} 99.59
g1pyo.1257 Caspase-2 {Human (Homo sapiens) [TaxId: 9606]} 99.51
g1nme.1238 Apopain (caspase-3, cpp32) {Human (Homo sapiens) [ 99.48
d1m72a_256 Caspase-1 {Fall armyworm (Spodoptera frugiperda) [ 99.42
d1f1ja_245 Caspase-7 {Human (Homo sapiens) [TaxId: 9606]} 99.34
>d1nw9b_ c.17.1.1 (B:) Caspase-9 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Caspase-like
superfamily: Caspase-like
family: Caspase catalytic domain
domain: Caspase-9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=5.2e-19  Score=167.71  Aligned_cols=128  Identities=15%  Similarity=0.141  Sum_probs=88.7

Q ss_pred             CeEEEEEeeC-CCCC--CCCCcchHHHHHHHHHHHHhhcCCCCccEEEeecCCCCCCCCcHHHHHHHHHHHHHh-CCCCC
Q 041177            2 TKKAVLIGIN-YPGT--KAELKGCVNDVKRMYACLVDRYGFSEENITVLIDTDDRSTQPTGRNIRRALGNLVRS-AEPGD   77 (417)
Q Consensus         2 ~r~ALlIGIN-Y~~~--~~~L~g~~nDa~~m~~~L~~~~Gf~~~dI~vL~D~~~~~~~pTr~nI~~aL~~Lv~~-a~pgD   77 (417)
                      |-+|||||++ |...  .....|+.+||++|+++|+ .+||.   |.++.|       +|++.|++++.++... .+++|
T Consensus        21 rG~aLII~n~~f~~~~~l~~r~Ga~~Da~~l~~~l~-~lGF~---V~~~~n-------lt~~~~~~~l~~~~~~~~~~~d   89 (277)
T d1nw9b_          21 CGHCLIINNVNFCRESGLRTRTGSNIDCEKLRRRFS-SLHFM---VEVKGD-------LTAKKMVLALLELARQDHGALD   89 (277)
T ss_dssp             CEEEEEEECCCCCGGGTCCCCTTHHHHHHHHHHHHH-HTTEE---EEEEES-------CCHHHHHHHHHHHHHSCCTTCS
T ss_pred             ccEEEEEeCccCCCccCCCCCCCcHHHHHHHHHHHH-HCCCE---EEEeeC-------CCHHHHHHHHHHhhhhcccCCC
Confidence            4599999997 5442  3456789999999999997 58995   788887       7999999999887664 67899


Q ss_pred             EEEEEeeCCCCCCCCCCCCCCCCCCcceeecCCCCCCCHHHHHHHH--HhCC--CCCeEEEEEeCCCCCcCCcc
Q 041177           78 VLFVHYSGHGTRLPAETGEDDDTGYDECIVPSDMNLITDDDFREFV--DQIP--PGCEITVVSDSCHSGGLIDE  147 (417)
Q Consensus        78 ~l~fYFSGHG~~~~d~~G~de~dG~de~lvP~D~~~Is~~el~~ll--~~l~--~g~~l~iILDcChSG~~~d~  147 (417)
                      .++|||+|||.+....       +|.-.+.+.|...+...++...+  ..++  .++..++|+||||++.+...
T Consensus        90 ~~v~~~~gHG~~~~~~-------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~kpki~~idaCr~~~~~~~  156 (277)
T d1nw9b_          90 CCVVVILSHGCQASHL-------QFPGAVYGTDGCPVSVEKIVNIFNGTSCPSLGGKPKLFFIQACGGEQKDHG  156 (277)
T ss_dssp             EEEEEEEEEEECCCCS-------SSCCEEECTTSCEEEHHHHHHTTCTTTCGGGTTSCEEEEEEEEC-------
T ss_pred             EEEEEEeCCCcccccc-------cccCcccCCccccccHHHHHHHhHHhhhhhcccCcEEEEEecccCCccccc
Confidence            9999999999875422       23222445565555555654433  2221  24667899999999977654
>d1m72a_ c.17.1.1 (A:) Caspase-1 {Fall armyworm (Spodoptera frugiperda) [TaxId: 7108]} Back     information, alignment and structure
>d1f1ja_ c.17.1.1 (A:) Caspase-7 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure