Citrus Sinensis ID: 041212
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 337 | ||||||
| 224134410 | 309 | predicted protein [Populus trichocarpa] | 0.908 | 0.990 | 0.803 | 1e-133 | |
| 359473051 | 334 | PREDICTED: uncharacterized protein LOC10 | 0.931 | 0.940 | 0.777 | 1e-132 | |
| 255566309 | 331 | conserved hypothetical protein [Ricinus | 0.899 | 0.915 | 0.796 | 1e-129 | |
| 449455467 | 336 | PREDICTED: uncharacterized protein LOC10 | 0.884 | 0.886 | 0.698 | 1e-113 | |
| 18403760 | 323 | protein exordium like 1 [Arabidopsis tha | 0.910 | 0.950 | 0.632 | 1e-108 | |
| 297826991 | 324 | phosphate-responsive 1 family protein [A | 0.925 | 0.962 | 0.626 | 1e-108 | |
| 359474957 | 344 | PREDICTED: uncharacterized protein LOC10 | 0.884 | 0.866 | 0.608 | 1e-102 | |
| 449454414 | 346 | PREDICTED: uncharacterized protein LOC10 | 0.866 | 0.843 | 0.637 | 1e-101 | |
| 18398352 | 363 | protein exordium like 5 [Arabidopsis tha | 0.884 | 0.820 | 0.597 | 1e-101 | |
| 21594010 | 365 | unknown [Arabidopsis thaliana] | 0.884 | 0.816 | 0.594 | 1e-100 |
| >gi|224134410|ref|XP_002321817.1| predicted protein [Populus trichocarpa] gi|222868813|gb|EEF05944.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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Score = 479 bits (1233), Expect = e-133, Method: Compositional matrix adjust.
Identities = 249/310 (80%), Positives = 279/310 (90%), Gaps = 4/310 (1%)
Query: 30 ELFNQAKNYEGSSDLVNLEYHMGPVLASPINVYIIWYGDWSLSQQSTIRDFLYSFSSPAA 89
LFNQAKNYEGSSDLV+L+YHMGPVLA P+N+YIIWYG W+ + Q+TIRDF+YS S +
Sbjct: 2 NLFNQAKNYEGSSDLVDLQYHMGPVLAGPVNLYIIWYGRWNRNHQATIRDFIYSLSYSSP 61
Query: 90 YPSVADWWRTVRLYTDQTGSNITGNIVLSGEFYDTRYSHGAYLSRLDMQSIIRTAV--NK 147
YPSV+DWWRTVRLYTDQTGSN+TGNIVLSGEFYD RYSHG YLSRL MQSII++AV +
Sbjct: 62 YPSVSDWWRTVRLYTDQTGSNVTGNIVLSGEFYDYRYSHGRYLSRLAMQSIIKSAVTAHP 121
Query: 148 RAMALNPHSGLYLVLTSHDVQVQDFCRAVCGFHYFTFPNIVGVTVPYAWVGYSGAQCPGM 207
RA+ LNPH+GLYLVLTS DVQVQDFCRAVCGFHYFTFP IVGVTVPYAWVGYSG QCPGM
Sbjct: 122 RALPLNPHNGLYLVLTSGDVQVQDFCRAVCGFHYFTFPTIVGVTVPYAWVGYSGTQCPGM 181
Query: 208 CAYPFAWPGYSGSSSSPPRNNEGHNIMRAPNGDVGVDGMISVLAHELAEVSSNPLVNAWY 267
CAYPFAWP YSG PP N G+NIMRAPNGD GVDGMISVLAHELAEVSSNP +NAWY
Sbjct: 182 CAYPFAWPKYSGKP--PPSTNGGNNIMRAPNGDPGVDGMISVLAHELAEVSSNPFINAWY 239
Query: 268 AGDDPTAPTEIADLCLGVYGSGAGGGYVGKVDKDTWGNAYNVNGVRGRKFMVQWVWDPVK 327
AGDDPT+PTEIADLCLGVYG+G GGG+VGKV+KD+WG+ YNVNGV+GR+F+VQWVW+PVK
Sbjct: 240 AGDDPTSPTEIADLCLGVYGTGGGGGFVGKVNKDSWGDGYNVNGVKGRRFLVQWVWNPVK 299
Query: 328 KRCYGPNAID 337
+RC+GPNAID
Sbjct: 300 RRCFGPNAID 309
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359473051|ref|XP_003631238.1| PREDICTED: uncharacterized protein LOC100854077 [Vitis vinifera] gi|147798990|emb|CAN61638.1| hypothetical protein VITISV_008459 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|255566309|ref|XP_002524141.1| conserved hypothetical protein [Ricinus communis] gi|223536608|gb|EEF38252.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|449455467|ref|XP_004145474.1| PREDICTED: uncharacterized protein LOC101205825 [Cucumis sativus] gi|449527523|ref|XP_004170760.1| PREDICTED: uncharacterized protein LOC101229492 [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|18403760|ref|NP_565797.1| protein exordium like 1 [Arabidopsis thaliana] gi|20197218|gb|AAC61821.2| Expressed protein [Arabidopsis thaliana] gi|29824368|gb|AAP04144.1| unknown protein [Arabidopsis thaliana] gi|30793801|gb|AAP40353.1| unknown protein [Arabidopsis thaliana] gi|110739099|dbj|BAF01466.1| hypothetical protein [Arabidopsis thaliana] gi|330253979|gb|AEC09073.1| protein exordium like 1 [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|297826991|ref|XP_002881378.1| phosphate-responsive 1 family protein [Arabidopsis lyrata subsp. lyrata] gi|297327217|gb|EFH57637.1| phosphate-responsive 1 family protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|359474957|ref|XP_003631558.1| PREDICTED: uncharacterized protein LOC100853859 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|449454414|ref|XP_004144950.1| PREDICTED: uncharacterized protein LOC101213534 [Cucumis sativus] gi|449473929|ref|XP_004154024.1| PREDICTED: uncharacterized protein LOC101210974 [Cucumis sativus] gi|449528191|ref|XP_004171089.1| PREDICTED: uncharacterized LOC101213534 [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|18398352|ref|NP_565409.1| protein exordium like 5 [Arabidopsis thaliana] gi|4584346|gb|AAD25141.1| expressed protein [Arabidopsis thaliana] gi|16604330|gb|AAL24171.1| At2g17230/T23A1.9 [Arabidopsis thaliana] gi|19699196|gb|AAL90964.1| At2g17230/T23A1.9 [Arabidopsis thaliana] gi|330251507|gb|AEC06601.1| protein exordium like 5 [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|21594010|gb|AAM65928.1| unknown [Arabidopsis thaliana] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 337 | ||||||
| TAIR|locus:2063399 | 323 | EXL7 "AT2G35150" [Arabidopsis | 0.896 | 0.934 | 0.601 | 1.6e-104 | |
| TAIR|locus:2059652 | 363 | EXL5 "AT2G17230" [Arabidopsis | 0.875 | 0.812 | 0.557 | 1.4e-94 | |
| TAIR|locus:2153087 | 337 | EXL3 "AT5G51550" [Arabidopsis | 0.887 | 0.887 | 0.546 | 7.5e-89 | |
| TAIR|locus:2203314 | 309 | PHI-1 "AT1G35140" [Arabidopsis | 0.804 | 0.877 | 0.334 | 2.8e-34 | |
| TAIR|locus:2138753 | 314 | EXO "AT4G08950" [Arabidopsis t | 0.783 | 0.840 | 0.334 | 6.2e-30 | |
| TAIR|locus:2173428 | 305 | EXL2 "AT5G64260" [Arabidopsis | 0.786 | 0.868 | 0.319 | 4.4e-29 | |
| TAIR|locus:2184792 | 278 | EXL4 "AT5G09440" [Arabidopsis | 0.534 | 0.647 | 0.346 | 3.1e-19 | |
| TAIR|locus:2075482 | 332 | EXL6 "AT3G02970" [Arabidopsis | 0.554 | 0.563 | 0.244 | 6.3e-09 |
| TAIR|locus:2063399 EXL7 "AT2G35150" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 1035 (369.4 bits), Expect = 1.6e-104, P = 1.6e-104
Identities = 187/311 (60%), Positives = 238/311 (76%)
Query: 30 ELFNQAKNYEGSSDLVNLEYHMGPVLASPI-NVYIIWYGDWSLSQQSTIRDFLYSFSSPA 88
+ F+++KNYEGSSDLV+L+YH+GPV++SP+ ++YIIWYG W+ + QS IRDFLYS S+PA
Sbjct: 19 QFFDESKNYEGSSDLVDLQYHLGPVISSPVTSLYIIWYGRWNPTHQSIIRDFLYSVSAPA 78
Query: 89 A--YPSVADWWRTVRLYTDQTGSNITGNIVLSGEFYDTRYSHGAYLSRLDMQSIIRTAVN 146
YPSV++WW+TVRLY DQTGSNIT +VLSGEF+D+ YSHG++L+R +QS+IRTA+
Sbjct: 79 PAQYPSVSNWWKTVRLYRDQTGSNITDTLVLSGEFHDSTYSHGSHLTRFSVQSVIRTALT 138
Query: 147 KRAMALNPHSGLYLVLTSHDVQVQDFCRAVCGFHYFTFPNIVGVTVPYAWVGYSGAQCPG 206
+ + LN +GLYLVLTS DV++Q+FCRA+CGFHYFTFP++VG TVPYAWVG S QCP
Sbjct: 139 SK-LPLNAVNGLYLVLTSDDVEMQEFCRAICGFHYFTFPSVVGATVPYAWVGNSERQCPE 197
Query: 207 MCAYPFAWXXXXXXXXXXXRNNEGHNIMRAPNGDVGVDGMISVLAHELAEVSSNPLVNAW 266
MCAYPFA R M+ PNG+VG+DGMISV+AHELAEVSSNP++N W
Sbjct: 198 MCAYPFAQPKPFPGSGFVAREK-----MKPPNGEVGIDGMISVIAHELAEVSSNPMLNGW 252
Query: 267 YAGDDPTAPTEIADLCLXXXXXXXXXXXXXKVDKDTWGNAYNVNGVRGRKFMVQWVWDPV 326
Y G+D TAPTEIADLCL V KD W N YNV GV+GRK+++QWVWD
Sbjct: 253 YGGEDATAPTEIADLCLGVYGSGGGGGYMGSVYKDRWRNVYNVKGVKGRKYLIQWVWDLN 312
Query: 327 KKRCYGPNAID 337
+ RC+GPNA++
Sbjct: 313 RNRCFGPNAMN 323
|
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| TAIR|locus:2059652 EXL5 "AT2G17230" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2153087 EXL3 "AT5G51550" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2203314 PHI-1 "AT1G35140" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2138753 EXO "AT4G08950" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2173428 EXL2 "AT5G64260" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2184792 EXL4 "AT5G09440" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2075482 EXL6 "AT3G02970" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 337 | |||
| pfam04674 | 273 | pfam04674, Phi_1, Phosphate-induced protein 1 cons | 1e-152 |
| >gnl|CDD|218205 pfam04674, Phi_1, Phosphate-induced protein 1 conserved region | Back alignment and domain information |
|---|
Score = 427 bits (1099), Expect = e-152
Identities = 146/291 (50%), Positives = 181/291 (62%), Gaps = 21/291 (7%)
Query: 47 LEYHMGPVLASPINVYIIWYGDWSLSQQSTIRDFLYSFSSP--AAYPSVADWWRTVRLYT 104
L YHMG VL+ I+V +IWYG ++ +Q++ IRDFL S SSP A PSVA WW+TV LY
Sbjct: 1 LTYHMGAVLSGNISVNLIWYGKFTPAQRAIIRDFLLSLSSPSPAPSPSVAAWWKTVELYY 60
Query: 105 DQTGSNITGNIVLSGEFYDTRYSHGAYLSRLDMQSIIRTAVNKRAMALNPHSGLYLVLTS 164
DQTG+NI+ ++VL G+ D YS G L+RL +QS+ A R G+YLVLTS
Sbjct: 61 DQTGANISASLVLGGQVLDESYSLGKSLTRLQIQSLAAKAGTHR-------GGVYLVLTS 113
Query: 165 HDVQVQDFCRAVCGFHYFTFPNIVGVTVPYAWVGYSGAQCPGMCAYPFAWPGYSGSSSSP 224
DV V+ FC + CGFH TFP++VG YAWVG S QCPG CA+PF P Y +P
Sbjct: 114 PDVTVEGFCMSRCGFHGSTFPSVVGYRFAYAWVGNSATQCPGQCAWPFHQPVYGP--QAP 171
Query: 225 PRNNEGHNIMRAPNGDVGVDGMISVLAHELAEVSSNPLVNAWYAGDDPTAPTEIADLCLG 284
P + APNGDVGVDGM+ LAH LA +NP N +Y G D TAP E A C G
Sbjct: 172 P--------LVAPNGDVGVDGMVINLAHLLAGTVTNPFGNGYYQG-DATAPLEAASACPG 222
Query: 285 VYGSGAGGGYVGKVDKD-TWGNAYNVNGVRGRKFMVQWVWDPVKKRCYGPN 334
VYGSGA GY G++ D G +YN NGV GRK+++ +WDPV C
Sbjct: 223 VYGSGAYPGYAGQLLVDAATGASYNANGVNGRKYLLPALWDPVTSACSTLV 273
|
Family of conserved plant proteins. Conserved region identified in a phosphate-induced protein of unknown function. Length = 273 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 337 | |||
| PF04674 | 273 | Phi_1: Phosphate-induced protein 1 conserved regio | 100.0 |
| >PF04674 Phi_1: Phosphate-induced protein 1 conserved region; InterPro: IPR006766 This entry represents a family of conserved plant proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-127 Score=904.17 Aligned_cols=269 Identities=52% Similarity=0.959 Sum_probs=261.4
Q ss_pred ccccCCccccCCceEEEEEeecCCcchhhhHHHHHhcCCCC--CCCCcHHHHHHHhHhhhccCCCcceecEEEeeEEecC
Q 041212 47 LEYHMGPVLASPINVYIIWYGDWSLSQQSTIRDFLYSFSSP--AAYPSVADWWRTVRLYTDQTGSNITGNIVLSGEFYDT 124 (337)
Q Consensus 47 L~YH~GpvL~g~i~V~lIwYG~ftp~QksiI~DFl~SLs~~--~~~PSVs~WW~t~~~Y~~q~~~~v~~~v~l~~qv~D~ 124 (337)
|+|||||||+|+|+|||||||+|+|+||+||+|||+||+++ +++|||++||+|+++|+++++++++.+|+|++|+.|+
T Consensus 1 L~YH~GplLtg~i~V~lIWYG~ftp~QkaiI~DFl~SLs~~~~~~~PSVa~WW~t~~~Y~~~~~~~~~~~v~l~~qv~D~ 80 (273)
T PF04674_consen 1 LTYHGGPLLTGNINVYLIWYGRFTPAQKAIIRDFLRSLSSSAPAPSPSVAQWWKTTEKYYDQAGANVSGRVVLGGQVSDE 80 (273)
T ss_pred CCCCCCceeecCeeEEEEEeeCCCHHHHHHHHHHHHhcCCCCCCCCCChhhhhhhHHhhcccccccccceEEEeeEEecC
Confidence 79999999999999999999999999999999999999986 5899999999999999999999888999999999999
Q ss_pred CCCCCCCCChHhHHHHHHHhhhccccCCCCCCceEEEEcccCccccccccccccCCCCCCcccccceeeEEEecCCCCCC
Q 041212 125 RYSHGAYLSRLDMQSIIRTAVNKRAMALNPHSGLYLVLTSHDVQVQDFCRAVCGFHYFTFPNIVGVTVPYAWVGYSGAQC 204 (337)
Q Consensus 125 ~ySlGksLs~~~i~~lv~~ai~~g~lP~d~~~gvylVLTa~DV~v~gFC~s~CG~H~~~~~s~~~~~~~YawVGNs~~qC 204 (337)
+|||||+|+++||++||++++. |+ +||||||||+||+||||||++||+|++++++..+.+++|+||||+++||
T Consensus 81 ~ySlGksL~~~~i~~lv~~~~~------~~-~gvylVLTa~DV~v~gFC~~~CG~H~~~~~~~~~~~~~YawVGns~~qC 153 (273)
T PF04674_consen 81 NYSLGKSLSRSQIQQLVAKAIP------DP-NGVYLVLTAADVAVEGFCMSRCGFHGSTFPSSVGKRLPYAWVGNSETQC 153 (273)
T ss_pred CCCCCcccCHHHHHHHHHhcCC------CC-CceEEEEecccceecccccccccCCcCCcccccccceeEEEecCccCCC
Confidence 9999999999999999999874 44 9999999999999999999999999999888778899999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCcccCCCCCCcchhHHHHHHHHHHhhhcCccCCccccCCCCCCCccccccccc
Q 041212 205 PGMCAYPFAWPGYSGSSSSPPRNNEGHNIMRAPNGDVGVDGMISVLAHELAEVSSNPLVNAWYAGDDPTAPTEIADLCLG 284 (337)
Q Consensus 205 Pg~CAwPF~~P~yGP~~~~~~~~~~q~~pL~~PNGDvGvDGMvi~iA~~LAeavTNPf~ng~yqG~~~~aplEaadaC~g 284 (337)
||+||||||||+||| |++||++||||||||||||||||||||++||||+||||||+ ++||+|++|+|+|
T Consensus 154 Pg~CAwPf~~p~ygp----------~~~~l~~PNgDvGvDGMvi~iA~~LA~~~TNP~~~g~yqg~-~~aplEaa~aC~g 222 (273)
T PF04674_consen 154 PGQCAWPFHQPIYGP----------QGPPLVPPNGDVGVDGMVINIAHELAGAVTNPFGNGYYQGD-ATAPLEAADACAG 222 (273)
T ss_pred CCCCCCCCcccccCC----------CCCCccCCCCCcchhhHHHHHHHHHHHhhcCccccccccCC-CCCccchhhhccc
Confidence 999999999999999 99999999999999999999999999999999999999988 9999999999999
Q ss_pred cccCCCCCCCccceeecCC-CccccccccCCceeeeeccccCCCCCccCC
Q 041212 285 VYGSGAGGGYVGKVDKDTW-GNAYNVNGVRGRKFMVQWVWDPVKKRCYGP 333 (337)
Q Consensus 285 iyG~GaypGY~G~vlvD~~-GASyN~~G~nGRkfLlpa~WdP~t~sC~~~ 333 (337)
|||+||||||+|+|++|+. |||||++|+|||||||||||||+|++|+|+
T Consensus 223 iyG~Gaypgy~G~l~vD~~tGaSyN~~G~~gRkfLlpa~wdP~t~~C~t~ 272 (273)
T PF04674_consen 223 IYGSGAYPGYPGQLLVDPATGASYNANGVNGRKFLLPALWDPETSSCSTL 272 (273)
T ss_pred cccCCCCCCCCcceeecCCCCceeeccccCCceEEeecccCCCcCccccc
Confidence 9999999999999999977 999999999999999999999999999987
|
A conserved region in these proteins was identified in a phosphate-induced protein of unknown function []. |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00