Citrus Sinensis ID: 041225
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 658 | 2.2.26 [Sep-21-2011] | |||||||
| P98204 | 1158 | Phospholipid-transporting | yes | no | 0.873 | 0.496 | 0.574 | 0.0 | |
| O94296 | 1258 | Probable phospholipid-tra | yes | no | 0.861 | 0.450 | 0.417 | 1e-132 | |
| Q8TF62 | 1192 | Probable phospholipid-tra | yes | no | 0.882 | 0.487 | 0.406 | 1e-130 | |
| P39524 | 1355 | Probable phospholipid-tra | yes | no | 0.860 | 0.417 | 0.413 | 1e-128 | |
| P98198 | 1209 | Probable phospholipid-tra | no | no | 0.893 | 0.486 | 0.394 | 1e-127 | |
| P98199 | 1209 | Probable phospholipid-tra | no | no | 0.889 | 0.483 | 0.392 | 1e-126 | |
| Q9SX33 | 1200 | Putative phospholipid-tra | no | no | 0.882 | 0.484 | 0.406 | 1e-124 | |
| Q9XIE6 | 1213 | Phospholipid-transporting | no | no | 0.882 | 0.478 | 0.397 | 1e-124 | |
| Q9LK90 | 1189 | Putative phospholipid-tra | no | no | 0.892 | 0.493 | 0.400 | 1e-123 | |
| Q9LNQ4 | 1216 | Putative phospholipid-tra | no | no | 0.878 | 0.475 | 0.400 | 1e-122 |
| >sp|P98204|ALA1_ARATH Phospholipid-transporting ATPase 1 OS=Arabidopsis thaliana GN=ALA1 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 700 bits (1807), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/630 (57%), Positives = 445/630 (70%), Gaps = 55/630 (8%)
Query: 1 MELVRLGQSYFMIEDKHMYDSSSGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQ 60
MELVR+GQ+YFM D MYD SS S FQCR L+INEDLGQI+Y+FSDKTGTLT+NKMEFQ
Sbjct: 411 MELVRIGQAYFMTNDDQMYDESSDSSFQCRALNINEDLGQIKYLFSDKTGTLTDNKMEFQ 470
Query: 61 RASVCGKNYGNSLLLAQQVSAAAVRR----WKLKSEISVDSKLMELLSKDLVGDERIAAH 116
A + G +Y + + ++ K K + VD L++L +E A+
Sbjct: 471 CACIEGVDYSDREPADSEHPGYSIEVDGIILKPKMRVRVDPVLLQLTKTGKATEEAKRAN 530
Query: 117 EFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYTLFE 176
EFFL+LAACNT++PI +N NV+ +DYQGESPDEQALV AA+AYG+ L E
Sbjct: 531 EFFLSLAACNTIVPI--------VSNTSDPNVKLVDYQGESPDEQALVYAAAAYGFLLIE 582
Query: 177 RTSGHIVIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADSSMFNILAK 236
RTSGHIVI++ GE R +VLGLHEFDS RKRMSV++ PD SVK+ VKGADSSMF ++
Sbjct: 583 RTSGHIVINVRGETQRFNVLGLHEFDSDRKRMSVILGCPDMSVKLFVKGADSSMFGVM-- 640
Query: 237 DSKRNDLIRHITQSHLSEYSSQGLRTLVVASRDLADEELKQWQHRYEDASTSLVDRASKL 296
D +I H T+ L YSS GLRTLVV R+L D E +QW +E AST+L+ RA L
Sbjct: 641 DESYGGVI-HETKIQLHAYSSDGLRTLVVGMRELNDSEFEQWHSSFEAASTALIGRAGLL 699
Query: 297 RQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCK 356
R+ A IE +L ++GAT IEDKLQ GVPEAIE+LR AGIKVWVLTGDKQ+TAISI S +
Sbjct: 700 RKVAGNIETNLRIVGATAIEDKLQRGVPEAIESLRIAGIKVWVLTGDKQETAISIGFSSR 759
Query: 357 LLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAK 416
LLT +M+QI+IN NS + C+ L +A A SND
Sbjct: 760 LLTRNMRQIVINSNSLDSCRRSLEEANASIA------------------------SNDE- 794
Query: 417 FSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQK 476
SD ++ALIIDG SL+Y+L+ DLE LF +A C +LCCRVAP QK
Sbjct: 795 -SD--------------NVALIIDGTSLIYVLDNDLEDVLFQVACKCSAILCCRVAPFQK 839
Query: 477 AGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLK 536
AGIV L+K+RT DMTLAIGDGANDVSMIQMADVGVGI GQEGRQAVMASDFAMGQFRFL
Sbjct: 840 AGIVALVKNRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRFLV 899
Query: 537 RLLLVHGHWNYQRIGYLVLYNFYRNAVFVLMLFWYILFTGFSTTSALTDWSSVFYSLLYT 596
LLLVHGHWNYQR+GY++LYNFYRNAVFVL+LFWY+LFT ++ T+A+T+WSSV YS++YT
Sbjct: 900 PLLLVHGHWNYQRMGYMILYNFYRNAVFVLILFWYVLFTCYTLTTAITEWSSVLYSVIYT 959
Query: 597 SVPTIVVGIVDKDLSHKTLMQYPKLYVVQQ 626
++PTI++GI+DKDL +TL+ +P+LY V Q
Sbjct: 960 AIPTIIIGILDKDLGRQTLLDHPQLYGVGQ 989
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 6EC: .EC: 3EC: .EC: 1 |
| >sp|O94296|YOOC_SCHPO Probable phospholipid-transporting ATPase C887.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC887.12 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 473 bits (1218), Expect = e-132, Method: Compositional matrix adjust.
Identities = 262/627 (41%), Positives = 369/627 (58%), Gaps = 60/627 (9%)
Query: 1 MELVRLGQSYFMIEDKHMYDSSSGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQ 60
ELVR Q+ + D MY+ + + CRT S+ E+LGQ+ YIFSDKTGTLT N+MEF+
Sbjct: 472 FELVRYIQAQLISSDLDMYNEETDTPAACRTSSLVEELGQVGYIFSDKTGTLTRNQMEFR 531
Query: 61 RASVCGKNYGNSLLLAQQVSAAAVRRWKLKSEISVDSKLMELLSKDLVGDERIA-AHEFF 119
+ ++ G Y + + +Q ++ L S++ + + L ++L E + H+F
Sbjct: 532 QCTIAGVAYADVIPEDRQFTSE-----DLDSDMYIYD--FDTLKENLKHSENASLIHQFL 584
Query: 120 LTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYTLFERTS 179
L L+ C+TVIP E+ +I YQ SPDE ALV A++ GY R
Sbjct: 585 LVLSICHTVIP------------EYDESTNSIKYQASSPDEGALVKGAASIGYKFLARKP 632
Query: 180 GHIVIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADSSMFNILAKDSK 239
+ + I G+ ++L + EF+S RKRMS+V R PD +++ VKGAD+ + LA D+
Sbjct: 633 HLVTVSIFGKDESYELLHICEFNSTRKRMSIVFRCPDGKIRLYVKGADTVIMERLASDNP 692
Query: 240 RNDLIRHITQSHLSEYSSQGLRTLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQT 299
H HL +Y++ GLRTL +A R++ ++E ++W +E A++SLVDRA KL
Sbjct: 693 YLQTTIH----HLEDYATVGLRTLCIAMREVPEDEYQRWSTVFETAASSLVDRAQKLMDA 748
Query: 300 AALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLT 359
A IE DL LLGAT IED+LQDGVP+ I L+ AGIK+WVLTGD+Q+TAI+I +SCKL+
Sbjct: 749 AEEIEKDLILLGATAIEDRLQDGVPDTISTLQTAGIKIWVLTGDRQETAINIGMSCKLID 808
Query: 360 PDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSD 419
DM +I+N EE K+ A++ AK S
Sbjct: 809 EDMGLVIVN----EETKEATAESVM------------------------------AKLSS 834
Query: 420 VPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGI 479
+ + + S+AL+IDG SL Y L+ LE F+LA+ CR V+CCRV+PLQKA I
Sbjct: 835 IYRNEAT--TGNVESMALVIDGVSLTYALDFSLERRFFELASLCRAVICCRVSPLQKALI 892
Query: 480 VDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLL 539
V ++K T ++ LAIGDGANDV MIQ A VGVGI G EG QAV +SDF++ QF +LK+LL
Sbjct: 893 VKMVKRNTGEVLLAIGDGANDVPMIQAAHVGVGISGMEGLQAVRSSDFSISQFCYLKKLL 952
Query: 540 LVHGHWNYQRIGYLVLYNFYRNAVFVLMLFWYILFTGFSTTSALTDWSSVFYSLLYTSVP 599
LVHG W YQR+ L+LY+FY+N + FWY FS WS Y++L+T +P
Sbjct: 953 LVHGSWCYQRLSKLILYSFYKNIALYMTQFWYAFCNAFSGQVIFESWSISLYNVLFTVLP 1012
Query: 600 TIVVGIVDKDLSHKTLMQYPKLYVVQQ 626
+V+GI D+ +S L QYP+LY + Q
Sbjct: 1013 PVVIGIFDQFVSAGQLFQYPQLYQLGQ 1039
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of phospholipids. Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q8TF62|AT8B4_HUMAN Probable phospholipid-transporting ATPase IM OS=Homo sapiens GN=ATP8B4 PE=2 SV=3 | Back alignment and function description |
|---|
Score = 466 bits (1199), Expect = e-130, Method: Compositional matrix adjust.
Identities = 259/637 (40%), Positives = 381/637 (59%), Gaps = 56/637 (8%)
Query: 1 MELVRLGQSYFMIEDKHMYDSSSGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQ 60
+E++RLG SYF+ D+ MY S RT ++NE+LGQI YIFSDKTGTLT+N M F+
Sbjct: 346 VEVIRLGHSYFINWDRKMYYSRKAIPAVARTTTLNEELGQIEYIFSDKTGTLTQNIMTFK 405
Query: 61 RASVCGKNYG-------NSLLLAQQ-------VSAAAVRRWKLKSEISVDSKLMELLSKD 106
R S+ G+ YG + Q+ V + A R ++ D LME +
Sbjct: 406 RCSINGRIYGEVHDDLDQKTEITQEKEPVDFSVKSQADREFQF-----FDHHLMESIK-- 458
Query: 107 LVGDERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSA 166
+GD ++ HEF LA C+TV+ + S+G + YQ +SPDE ALV+A
Sbjct: 459 -MGDPKV--HEFLRLLALCHTVM---SEENSAG----------ELIYQVQSPDEGALVTA 502
Query: 167 ASAYGYTLFERTSGHIVIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGA 226
A +G+ RT I I+ G + +L +F++ RKRMSV++R P+ +K+ KGA
Sbjct: 503 ARNFGFIFKSRTPETITIEELGTLVTYQLLAFLDFNNTRKRMSVIVRNPEGQIKLYSKGA 562
Query: 227 DSSMFNILAKDSKRNDLIRHITQSHLSEYSSQGLRTLVVASRDLADEELKQWQHRYEDAS 286
D+ +F K N+++ +T HLSE++ +GLRTL +A RDL D+ K+W EDA+
Sbjct: 563 DTILFE---KLHPSNEVLLSLTSDHLSEFAGEGLRTLAIAYRDLDDKYFKEWHKMLEDAN 619
Query: 287 TSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQD 346
+ +R ++ IE DL LLGAT +EDKLQ+GV E + +L A IK+WVLTGDKQ+
Sbjct: 620 AATEERDERIAGLYEEIERDLMLLGATAVEDKLQEGVIETVTSLSLANIKIWVLTGDKQE 679
Query: 347 TAISIALSCKLLTPDMQQI-IINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAE 405
TAI+I +C +LT DM + +I GN+ E ++ L AK ++ N + + ++ +
Sbjct: 680 TAINIGYACNMLTDDMNDVFVIAGNNAVEVREELRKAKQNLFGQNRNFSNGHVVCEKKQQ 739
Query: 406 IEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRV 465
+E +I + D ALII+G+SL + LE D+++DL +LA C+
Sbjct: 740 LELDSIVEETITGD---------------YALIINGHSLAHALESDVKNDLLELACMCKT 784
Query: 466 VLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMAS 525
V+CCRV PLQKA +V+L+K + +TLAIGDGANDVSMI+ A +GVGI GQEG QAV+AS
Sbjct: 785 VICCRVTPLQKAQVVELVKKYRNAVTLAIGDGANDVSMIKSAHIGVGISGQEGLQAVLAS 844
Query: 526 DFAMGQFRFLKRLLLVHGHWNYQRIGYLVLYNFYRNAVFVLMLFWYILFTGFSTTSALTD 585
D++ QFR+L+RLLLVHG W+Y R+ + Y FY+N F L+ FW+ F GFS +
Sbjct: 845 DYSFAQFRYLQRLLLVHGRWSYFRMCKFLCYFFYKNFAFTLVHFWFGFFCGFSAQTVYDQ 904
Query: 586 WSSVFYSLLYTSVPTIVVGIVDKDLSHKTLMQYPKLY 622
W ++++YTS+P + +GI D+D+S + + P+LY
Sbjct: 905 WFITLFNIVYTSLPVLAMGIFDQDVSDQNSVDCPQLY 941
|
Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|P39524|ATC3_YEAST Probable phospholipid-transporting ATPase DRS2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DRS2 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 458 bits (1179), Expect = e-128, Method: Compositional matrix adjust.
Identities = 261/631 (41%), Positives = 374/631 (59%), Gaps = 65/631 (10%)
Query: 1 MELVRLGQSYFMIEDKHMYDSSSGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQ 60
+EL++ Q++ + D +Y + + RT S+ E+LGQI YIFSDKTGTLT N MEF+
Sbjct: 514 VELIKYYQAFMIGSDLDLYYEKTDTPTVVRTSSLVEELGQIEYIFSDKTGTLTRNIMEFK 573
Query: 61 RASVCGKNYGNSLLLAQQVSAAAVRRWKLKSEISVDSKLMELLSK---DLVGDERIAAHE 117
S+ G Y + + + + ++ I V + + L K D ++ ++
Sbjct: 574 SCSIAGHCYIDKIPEDKTAT--------VEDGIEVGYRKFDDLKKKLNDPSDEDSPIIND 625
Query: 118 FFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYTLFER 177
F LA C+TVIP +S G +I YQ SPDE ALV + GY R
Sbjct: 626 FLTLLATCHTVIP---EFQSDG----------SIKYQAASPDEGALVQGGADLGYKFIIR 672
Query: 178 --TSGHIVIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADSSMFNILA 235
S ++++ GE +L + EF+S RKRMS + RFPD S+K+ KGAD+ + L
Sbjct: 673 KPNSVTVLLEETGEEKEYQLLNICEFNSTRKRMSAIFRFPDGSIKLFCKGADTVILERL- 731
Query: 236 KDSKRNDLIRHITQSHLSEYSSQGLRTLVVASRDLADEELKQWQHRYEDASTSLVDRASK 295
D + N + T HL +Y+S+GLRTL +A RD+++ E ++W Y +A+T+L +RA K
Sbjct: 732 -DDEANQYVE-ATMRHLEDYASEGLRTLCLAMRDISEGEYEEWNSIYNEAATTLDNRAEK 789
Query: 296 LRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSC 355
L + A LIE +L L+GAT IEDKLQDGVPE I L++AGIK+WVLTGD+Q+TAI+I +SC
Sbjct: 790 LDEAANLIEKNLILIGATAIEDKLQDGVPETIHTLQEAGIKIWVLTGDRQETAINIGMSC 849
Query: 356 KLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDA 415
+LL+ DM +IIN EE +D T+ N +E + N+
Sbjct: 850 RLLSEDMNLLIIN----EETRD---------------DTERNL-------LEKINALNEH 883
Query: 416 KFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQ 475
+ S HD+ +LAL+IDG SL + LE +LE L +A C+ V+CCRV+PLQ
Sbjct: 884 QLST----HDMN------TLALVIDGKSLGFALEPELEDYLLTVAKLCKAVICCRVSPLQ 933
Query: 476 KAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFL 535
KA +V ++K ++ + LAIGDGANDVSMIQ A VGVGI G EG QA ++D A+GQF+FL
Sbjct: 934 KALVVKMVKRKSSSLLLAIGDGANDVSMIQAAHVGVGISGMEGMQAARSADIAVGQFKFL 993
Query: 536 KRLLLVHGHWNYQRIGYLVLYNFYRNAVFVLMLFWYILFTGFSTTSALTDWSSVFYSLLY 595
K+LLLVHG W+YQRI +LY+FY+N + FWY+ FS S + W+ FY+L +
Sbjct: 994 KKLLLVHGSWSYQRISVAILYSFYKNTALYMTQFWYVFANAFSGQSIMESWTMSFYNLFF 1053
Query: 596 TSVPTIVVGIVDKDLSHKTLMQYPKLYVVQQ 626
T P V+G+ D+ +S + L +YP+LY + Q
Sbjct: 1054 TVWPPFVIGVFDQFVSSRLLERYPQLYKLGQ 1084
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of phospholipids (Potential). Seems to be involved in ribosome assembly. Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|P98198|AT8B2_HUMAN Probable phospholipid-transporting ATPase ID OS=Homo sapiens GN=ATP8B2 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 457 bits (1175), Expect = e-127, Method: Compositional matrix adjust.
Identities = 248/629 (39%), Positives = 376/629 (59%), Gaps = 41/629 (6%)
Query: 1 MELVRLGQSYFMIEDKHMYDSSSGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQ 60
+E++RLG SYF+ DK M+ + + RT ++NE+LGQ+ YIFSDKTGTLT+N M F
Sbjct: 365 VEVIRLGHSYFINWDKKMFCMKKRTPAEARTTTLNEELGQVEYIFSDKTGTLTQNIMVFN 424
Query: 61 RASVCGKNYGNSLLLAQQVSAAAVRRWKLKSEIS--VDSKLM----ELLSKDLVGDERIA 114
+ S+ G +YG+ + + R + + D K + LL +GD
Sbjct: 425 KCSINGHSYGDVFDVLGHKAELGERPEPVDFSFNPLADKKFLFWDPSLLEAVKIGDPH-- 482
Query: 115 AHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYTL 174
HEFF L+ C+TV+ + ++ G + Y+ +SPDE ALV+AA +G+
Sbjct: 483 THEFFRLLSLCHTVM---SEEKNEG----------ELYYKAQSPDEGALVTAARNFGFVF 529
Query: 175 FERTSGHIVIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADSSMFNIL 234
RT I + G + +L + +F+++RKRMSV++R P+ +++ KGAD+ + + L
Sbjct: 530 RSRTPKTITVHEMGTAITYQLLAILDFNNIRKRMSVIVRNPEGKIRLYCKGADTILLDRL 589
Query: 235 AKDSKRNDLIRHITQSHLSEYSSQGLRTLVVASRDLADEELKQWQHRYEDASTSLVDRAS 294
++ + + T HL+EY+ +GLRTLV+A +DL +E ++W R AS + R
Sbjct: 590 HHSTQE---LLNTTMDHLNEYAGEGLRTLVLAYKDLDEEYYEEWAERRLQASLAQDSRED 646
Query: 295 KLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALS 354
+L +E ++ LLGAT IEDKLQ GVPE I L A IK+WVLTGDKQ+TA++I S
Sbjct: 647 RLASIYEEVENNMMLLGATAIEDKLQQGVPETIALLTLANIKIWVLTGDKQETAVNIGYS 706
Query: 355 CKLLTPDMQQI-IINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISN 413
CK+LT DM ++ I+ G++ E ++ L KAR + S+R+ N Y +
Sbjct: 707 CKMLTDDMTEVFIVTGHTVLEVREELR--KAREKMMDSSRSVGNG-------FTYQDKLS 757
Query: 414 DAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAP 473
+K + V + A AL+I+G+SL + LE D+E + + A +C+ V+CCRV P
Sbjct: 758 SSKLTSVLE-------AVAGEYALVINGHSLAHALEADMELEFLETACACKAVICCRVTP 810
Query: 474 LQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFR 533
LQKA +V+L+K +TLAIGDGANDVSMI+ A +GVGI GQEG QAV+ASD++ QF+
Sbjct: 811 LQKAQVVELVKKYKKAVTLAIGDGANDVSMIKTAHIGVGISGQEGIQAVLASDYSFSQFK 870
Query: 534 FLKRLLLVHGHWNYQRIGYLVLYNFYRNAVFVLMLFWYILFTGFSTTSALTDWSSVFYSL 593
FL+RLLLVHG W+Y R+ + Y FY+N F ++ FW+ F GFS + + Y++
Sbjct: 871 FLQRLLLVHGRWSYLRMCKFLCYFFYKNFAFTMVHFWFGFFCGFSAQTVYDQYFITLYNI 930
Query: 594 LYTSVPTIVVGIVDKDLSHKTLMQYPKLY 622
+YTS+P + +G+ D+D+ + M+YPKLY
Sbjct: 931 VYTSLPVLAMGVFDQDVPEQRSMEYPKLY 959
|
Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|P98199|AT8B2_MOUSE Probable phospholipid-transporting ATPase ID OS=Mus musculus GN=Atp8b2 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 453 bits (1165), Expect = e-126, Method: Compositional matrix adjust.
Identities = 248/632 (39%), Positives = 374/632 (59%), Gaps = 47/632 (7%)
Query: 1 MELVRLGQSYFMIEDKHMYDSSSGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQ 60
+E++RLG SYF+ DK M+ + + RT ++NE+LGQ+ YIFSDKTGTLT+N M F
Sbjct: 365 VEVIRLGHSYFINWDKKMFCMKKRTPAEARTTTLNEELGQVEYIFSDKTGTLTQNIMVFN 424
Query: 61 RASVCGKNYGNSLLLAQQVSAAAVRRWKL---------KSEISVDSKLMELLSKDLVGDE 111
+ S+ G +YG+ + + R + K + DS L+E + +GD
Sbjct: 425 KCSINGHSYGDVFDVLGHKAELGERPEPVDFSFNPLADKKFLFWDSSLLEAVK---MGDP 481
Query: 112 RIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYG 171
HEFF L+ C+TV+ + ++ G + Y+ +SPDE ALV+AA +G
Sbjct: 482 H--THEFFRLLSLCHTVM---SEEKNEG----------ELYYKAQSPDEGALVTAARNFG 526
Query: 172 YTLFERTSGHIVIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADSSMF 231
+ RT I + G + +L + +F+++RKRMSV++R P+ +++ KGAD+ +
Sbjct: 527 FVFRSRTPKTITVHELGTAITYQLLAILDFNNIRKRMSVIVRNPEGKIRLYCKGADTILL 586
Query: 232 NILAKDSKRNDLIRHITQSHLSEYSSQGLRTLVVASRDLADEELKQWQHRYEDASTSLVD 291
+ L ++ + T HL+EY+ GLRTLV+A +DL +E ++W R AS +
Sbjct: 587 DRLHPPTQE---LLSSTTDHLNEYAGDGLRTLVLAYKDLDEEYYEEWARRRLQASLAQDS 643
Query: 292 RASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISI 351
R +L +E D+ LLGAT IEDKLQ GVPE I L A IK+WVLTGDKQ+TA++I
Sbjct: 644 REDRLASIYEEVESDMMLLGATAIEDKLQQGVPETIALLTLANIKIWVLTGDKQETAVNI 703
Query: 352 ALSCKLLTPDMQQI-IINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLA 410
SCK+LT DM ++ ++ G++ E ++ L KAR + S+ N Y
Sbjct: 704 GYSCKMLTDDMTEVFVVTGHTVLEVREELR--KARKKMVDSSHAVGNG-------FTYQG 754
Query: 411 ISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCR 470
+ +K + V + A AL+I+G+SL + LE D+E + + A +C+ V+CCR
Sbjct: 755 NLSSSKLTSVLE-------AVAGEYALVINGHSLAHALEADMELEFLETACACKAVICCR 807
Query: 471 VAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMG 530
V PLQKA +V+L+K +TLAIGDGANDVSMI+ A +GVGI GQEG QAV+ASD++
Sbjct: 808 VTPLQKAQVVELVKKYKKAVTLAIGDGANDVSMIKTAHIGVGISGQEGIQAVLASDYSFS 867
Query: 531 QFRFLKRLLLVHGHWNYQRIGYLVLYNFYRNAVFVLMLFWYILFTGFSTTSALTDWSSVF 590
QF+FL+RLLLVHG W+Y R+ + Y FY+N F ++ FW+ F GFS + +
Sbjct: 868 QFKFLQRLLLVHGRWSYLRMCKFLCYFFYKNFAFTMVHFWFGFFCGFSAQTVYDQYFITL 927
Query: 591 YSLLYTSVPTIVVGIVDKDLSHKTLMQYPKLY 622
Y+++YTS+P + +G+ D+D+ + M+YPKLY
Sbjct: 928 YNIVYTSLPVLAMGVFDQDVPEQRSMEYPKLY 959
|
Mus musculus (taxid: 10090) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9SX33|ALA9_ARATH Putative phospholipid-transporting ATPase 9 OS=Arabidopsis thaliana GN=ALA9 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 447 bits (1149), Expect = e-124, Method: Compositional matrix adjust.
Identities = 266/654 (40%), Positives = 378/654 (57%), Gaps = 73/654 (11%)
Query: 1 MELVRLGQSYFMIEDKHMYDSSSGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQ 60
+E+V++ QS F+ +D HMY + + RT ++NE+LGQ+ I SDKTGTLT N MEF
Sbjct: 384 IEIVKVLQSIFINQDIHMYYEEADKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFI 443
Query: 61 RASVCGKNYGNSLLLAQQVSAAAVRRWKLKSEISVDSKLMEL-LSKDLVG---------- 109
+ SV G YG + +V A RR D +++ SK+ +
Sbjct: 444 KCSVAGTAYGRGV---TEVEMAMGRRKGGPLVFQSDENDIDMEYSKEAITEESTVKGFNF 500
Query: 110 -DERI------------AAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGE 156
DERI +FF LA C+TVIP + E+ E I Y+ E
Sbjct: 501 RDERIMNGNWVTETHADVIQKFFRLLAVCHTVIP------------EVDEDTEKISYEAE 548
Query: 157 SPDEQALVSAASAYGYTLFERTSGHIVID----INGEGL-RL-DVLGLHEFDSVRKRMSV 210
SPDE A V AA G+ F RT I + ++G+ + RL VL + EF+S RKRMSV
Sbjct: 549 SPDEAAFVIAARELGFEFFNRTQTTISVRELDLVSGKRVERLYKVLNVLEFNSTRKRMSV 608
Query: 211 VIRFPDNSVKVLVKGADSSMFNILAKDSKRNDLIRHITQSHLSEYSSQGLRTLVVASRDL 270
+++ D + +L KGAD+ MF L+K+ + T+ H++EY+ GLRTL++A R+L
Sbjct: 609 IVQEEDGKLLLLCKGADNVMFERLSKNGRE---FEEETRDHVNEYADAGLRTLILAYREL 665
Query: 271 ADEELKQWQHRYEDASTSL-VDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEA 329
++E K + R +A +S+ DR S + + IE DL LLGAT +EDKLQ+GVP+ I+
Sbjct: 666 DEKEYKVFNERISEAKSSVSADRESLIEEVTEKIEKDLILLGATAVEDKLQNGVPDCIDK 725
Query: 330 LRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVK 389
L QAGIK+WVLTGDK +TAI+I +C LL DM+QIIIN + E ++
Sbjct: 726 LAQAGIKIWVLTGDKMETAINIGFACSLLRQDMKQIIINLETPE--------------IQ 771
Query: 390 SSNRTKCNSKLKRSAEIEYLA-ISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYIL 448
S L+++ E + +A S + S + G + + + ALIIDG SL Y L
Sbjct: 772 S---------LEKTGEKDVIAKASKENVLSQIINGKTQLKYSGGNAFALIIDGKSLAYAL 822
Query: 449 EKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMAD 508
+ D++ +LA SC V+CCR +P QKA + L+KS TLAIGDGANDV M+Q AD
Sbjct: 823 DDDIKHIFLELAVSCASVICCRSSPKQKALVTRLVKSGNGKTTLAIGDGANDVGMLQEAD 882
Query: 509 VGVGICGQEGRQAVMASDFAMGQFRFLKRLLLVHGHWNYQRIGYLVLYNFYRNAVFVLML 568
+GVGI G EG QAVM+SD A+ QFR+L+RLLLVHGHW Y+RI ++ Y FY+N F L
Sbjct: 883 IGVGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRISTMICYFFYKNITFGFTL 942
Query: 569 FWYILFTGFSTTSALTDWSSVFYSLLYTSVPTIVVGIVDKDLSHKTLMQYPKLY 622
F Y +T FS+T A DW Y++ ++S+P I +G+ D+D+S + +++P LY
Sbjct: 943 FLYETYTTFSSTPAYNDWFLSLYNVFFSSLPVIALGVFDQDVSARYCLKFPLLY 996
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9XIE6|ALA3_ARATH Phospholipid-transporting ATPase 3 OS=Arabidopsis thaliana GN=ALA3 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 447 bits (1149), Expect = e-124, Method: Compositional matrix adjust.
Identities = 257/647 (39%), Positives = 371/647 (57%), Gaps = 66/647 (10%)
Query: 1 MELVRLGQSY-FMIEDKHMYDSSSGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEF 59
+E+++ QS F+ D +MY + + + RT ++NE+LGQ+ YIFSDKTGTLT N MEF
Sbjct: 366 IEMIKFIQSTQFINRDLNMYHAETNTPASARTSNLNEELGQVEYIFSDKTGTLTRNLMEF 425
Query: 60 QRASVCGKNYGNSL--------------LLAQQVSAAAVRRWKLKSEISVDSKLMELLSK 105
+ S+ G +YG + + +Q S A+R + D +LM +
Sbjct: 426 FKCSIGGVSYGCGVTEIEKGIAQRHGLKVQEEQRSTGAIREKGFNFD---DPRLMRGAWR 482
Query: 106 DLVGDERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVS 165
+ + E F LA C+TV+P E+ E I YQ SPDE ALV+
Sbjct: 483 NEPNPD--LCKELFRCLAICHTVLPEGD------------ESPEKIVYQAASPDEAALVT 528
Query: 166 AASAYGYTLFERTSGHIVIDING-------EGLRLDVLGLHEFDSVRKRMSVVIRFPDNS 218
AA +G+ + RT + + + + + ++L + EF+S RKR SVV RFPD
Sbjct: 529 AAKNFGFFFYRRTPTMVYVRESHVEKMGKIQDVAYEILNVLEFNSTRKRQSVVCRFPDGR 588
Query: 219 VKVLVKGADSSMFNILAKDSKRNDLIRHITQSHLSEYSSQGLRTLVVASRDLADEELKQW 278
+ + KGAD+ +F LA D +R +T+ HL + S GLRTL +A +DL E W
Sbjct: 589 LVLYCKGADNVIFERLANGM---DDVRKVTREHLEHFGSSGLRTLCLAYKDLNPETYDSW 645
Query: 279 QHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVW 338
++ A ++L DR KL + A LIE DL L+G+T IEDKLQ+GVP IE L +AGIK+W
Sbjct: 646 NEKFIQAKSALRDREKKLDEVAELIEKDLILIGSTAIEDKLQEGVPTCIETLSRAGIKIW 705
Query: 339 VLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKAR---YGVKSSNRTK 395
VLTGDK +TAI+IA +C L+ +M+Q +I+ + D + +A+ R + + +
Sbjct: 706 VLTGDKMETAINIAYACNLINNEMKQFVISSET-----DAIREAEERGDQVEIARVIKEE 760
Query: 396 CNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESD 455
+LK+S E +A+ H + VA L+L+IDG L+Y L+ L
Sbjct: 761 VKRELKKSLE--------EAQ-------HSLHTVAG-PKLSLVIDGKCLMYALDPSLRVM 804
Query: 456 LFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICG 515
L L+ +C V+CCRV+PLQKA + L++ +TL+IGDGANDVSMIQ A VG+GI G
Sbjct: 805 LLSLSLNCTSVVCCRVSPLQKAQVTSLVRKGAQKITLSIGDGANDVSMIQAAHVGIGISG 864
Query: 516 QEGRQAVMASDFAMGQFRFLKRLLLVHGHWNYQRIGYLVLYNFYRNAVFVLMLFWYILFT 575
EG QAVMASDFA+ QFRFL LLLVHG W+Y RI +V+Y FY+N F L FW+ T
Sbjct: 865 MEGMQAVMASDFAIAQFRFLTDLLLVHGRWSYLRICKVVMYFFYKNLTFTLTQFWFTFRT 924
Query: 576 GFSTTSALTDWSSVFYSLLYTSVPTIVVGIVDKDLSHKTLMQYPKLY 622
GFS DW +++++T++P IV+G+ +KD+S +YP+LY
Sbjct: 925 GFSGQRFYDDWFQSLFNVVFTALPVIVLGLFEKDVSASLSKRYPELY 971
|
Involved in transport of phospholipids. Contributes to transmembrane flipping of lipids. Required for secretory processes during plant development. Requires an interaction with an ALIS protein for activity. Has activity with phosphatidylserine, phosphatidylcholine and phosphatidylethanolamine, but not with lysolipid. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9LK90|ALA8_ARATH Putative phospholipid-transporting ATPase 8 OS=Arabidopsis thaliana GN=ALA8 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 442 bits (1136), Expect = e-123, Method: Compositional matrix adjust.
Identities = 260/649 (40%), Positives = 373/649 (57%), Gaps = 62/649 (9%)
Query: 1 MELVRLGQSYFMIEDKHMYDSSSGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQ 60
+E+V++ QS F+ +D+ MY + + RT ++NE+LGQ+ I SDKTGTLT N MEF
Sbjct: 378 IEVVKVLQSIFINQDQEMYHEETDRPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFV 437
Query: 61 RASVCGKNYGNSLLLAQQVSAAAVRRWK---LKSEISVDSKLMELLSKDLVG----DERI 113
+ S+ G YG + + A+R+ K + E+ + L K + G DERI
Sbjct: 438 KCSIAGTAYGRGMTEVE----VALRKQKGLMTQEEVGDNESLSIKEQKAVKGFNFWDERI 493
Query: 114 A------------AHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQ 161
+FF LA C+T IP + + I Y+ ESPDE
Sbjct: 494 VDGQWINQPNAELIQKFFRVLAICHTAIP------------DVNSDTGEITYEAESPDEA 541
Query: 162 ALVSAASAYGYTLFERT----SGHIVIDINGEGLR--LDVLGLHEFDSVRKRMSVVIRFP 215
A V A+ G+ F R+ S H + + GE + ++L + EF S RKRMSV++R P
Sbjct: 542 AFVIASRELGFEFFSRSQTSISLHEIDHMTGEKVDRVYELLHVLEFSSSRKRMSVIVRNP 601
Query: 216 DNSVKVLVKGADSSMFNILAKDSKRNDLIRHITQSHLSEYSSQGLRTLVVASRDLADEEL 275
+N + +L KGADS MF LAK ++N+ T+ H+ +Y+ GLRTLV+ R++ ++E
Sbjct: 602 ENRLLLLSKGADSVMFKRLAKHGRQNE---RETKEHIKKYAEAGLRTLVITYREIDEDEY 658
Query: 276 KQWQHRYEDASTSLV-DRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAG 334
W+ + +A T + DR + + A IE DL LLG+T +EDKLQ GVP+ IE L QAG
Sbjct: 659 IVWEEEFLNAKTLVTEDRDALIDAAADKIEKDLILLGSTAVEDKLQKGVPDCIEKLSQAG 718
Query: 335 IKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEE-ECKDLLADAKARYGVKSSNR 393
+K+WVLTGDK +TAI+I +C LL M+QI++ +S + E + D +A V ++
Sbjct: 719 VKIWVLTGDKTETAINIGYACSLLREGMKQILVTLDSSDIEALEKQGDKEA---VAKASF 775
Query: 394 TKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLE 453
+L+ +S A +D + KE + + L+IDG SL Y L+ LE
Sbjct: 776 QSIKKQLRE-------GMSQTAAVTD----NSAKENSEM--FGLVIDGKSLTYALDSKLE 822
Query: 454 SDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGI 513
+ +LA C V+CCR +P QKA + L+K+ T TLAIGDGANDV M+Q AD+GVGI
Sbjct: 823 KEFLELAIRCNSVICCRSSPKQKALVTRLVKNGTGRTTLAIGDGANDVGMLQEADIGVGI 882
Query: 514 CGQEGRQAVMASDFAMGQFRFLKRLLLVHGHWNYQRIGYLVLYNFYRNAVFVLMLFWYIL 573
G EG QAVMASDFA+ QFRFL+RLLLVHGHW Y+RI ++ Y FY+N F LFWY
Sbjct: 883 SGAEGMQAVMASDFAIAQFRFLERLLLVHGHWCYRRITLMICYFFYKNLAFGFTLFWYEA 942
Query: 574 FTGFSTTSALTDWSSVFYSLLYTSVPTIVVGIVDKDLSHKTLMQYPKLY 622
+ FS A DW Y++ +TS+P I +G+ D+D+S + ++YP LY
Sbjct: 943 YASFSGKPAYNDWYMSCYNVFFTSLPVIALGVFDQDVSARLCLKYPLLY 991
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9LNQ4|ALA4_ARATH Putative phospholipid-transporting ATPase 4 OS=Arabidopsis thaliana GN=ALA4 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 438 bits (1126), Expect = e-122, Method: Compositional matrix adjust.
Identities = 264/659 (40%), Positives = 373/659 (56%), Gaps = 81/659 (12%)
Query: 1 MELVRLGQSYFMIEDKHMYDSSSGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQ 60
+E+V++ Q+ F+ +D HMYDS SG RT ++NE+LGQ+ I SDKTGTLT N+M+F
Sbjct: 379 IEVVKVLQASFINKDLHMYDSESGVPAHARTSNLNEELGQVDTILSDKTGTLTCNQMDFL 438
Query: 61 RASVCGKNYGN-----SLLLAQQVSAAAVRRWKLKS----------EISVDSKLMELLSK 105
+ S+ G +YG + AQQ++ ++ S +I V+S + +
Sbjct: 439 KCSIAGTSYGVRSSEVEVAAAQQMAVDLDEHGEVSSRTSTPRAQARDIEVESSITPRIPI 498
Query: 106 DLVGDERIAAHE--------------FFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAI 151
G E I + FF LA C+T IP L E
Sbjct: 499 KGFGFEDIRLMDGNWLREPHTDDILLFFRILAICHTAIP------------ELNEETGKY 546
Query: 152 DYQGESPDEQALVSAASAYGYTLFERTSGHIVID--INGEGLRLD----VLGLHEFDSVR 205
Y+ ESPDE + ++AAS +G+ F+RT + + ++ G ++ VL L +F S R
Sbjct: 547 TYEAESPDEASFLTAASEFGFVFFKRTQSSVYVHERLSHSGQTIEREYKVLNLLDFTSKR 606
Query: 206 KRMSVVIRFPDNSVKVLVKGADSSMFNILAKDSKRNDLIRHITQSHLSEYSSQGLRTLVV 265
KRMSVV+R + + +L KGADS +F LAK+ K + T HL+EY GLRTL +
Sbjct: 607 KRMSVVVRDEEGQILLLCKGADSIIFERLAKNGK---VYLGPTTKHLNEYGEAGLRTLAL 663
Query: 266 ASRDLADEELKQWQHRYEDASTSL-VDRASKLRQTAALIECDLTLLGATGIEDKLQDGVP 324
+ R L +EE W + A TS+ DR L + + +IE DL L+GAT +EDKLQ GVP
Sbjct: 664 SYRKLDEEEYSAWNAEFHKAKTSIGSDRDELLERISDMIEKDLILVGATAVEDKLQKGVP 723
Query: 325 EAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIING-NSEEECKDLLADAK 383
+ I+ L QAG+K+WVLTGDK +TAI+I SC LL M+QI I NSE +D AK
Sbjct: 724 QCIDKLAQAGLKLWVLTGDKMETAINIGYSCSLLRQGMKQICITVVNSEGASQD----AK 779
Query: 384 ARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNS 443
A K N + + ++ + + D A+ ALIIDG +
Sbjct: 780 A---------VKDNILNQITKAVQMVKLEKDPH----------------AAFALIIDGKT 814
Query: 444 LVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSM 503
L Y LE +++ LA C V+CCRV+P QKA + L+K T +TLAIGDGANDV M
Sbjct: 815 LTYALEDEMKYQFLALAVDCASVICCRVSPKQKALVTRLVKEGTGKITLAIGDGANDVGM 874
Query: 504 IQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLVHGHWNYQRIGYLVLYNFYRNAV 563
IQ AD+GVGI G EG QAVMASDF++ QFRFL+RLL+VHGHW Y+RI ++ Y FY+N
Sbjct: 875 IQEADIGVGISGVEGMQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMICYFFYKNIA 934
Query: 564 FVLMLFWYILFTGFSTTSALTDWSSVFYSLLYTSVPTIVVGIVDKDLSHKTLMQYPKLY 622
F L LF++ FTGFS S D+ + ++++ TS+P I +G+ ++D+S + +Q+P LY
Sbjct: 935 FGLTLFYFEAFTGFSGQSVYNDYYLLLFNVVLTSLPVIALGVFEQDVSSEICLQFPALY 993
|
Involved in transport of phospholipids. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 658 | ||||||
| 255575596 | 1383 | phospholipid-transporting atpase, putati | 0.928 | 0.441 | 0.791 | 0.0 | |
| 356561863 | 1175 | PREDICTED: phospholipid-transporting ATP | 0.945 | 0.529 | 0.794 | 0.0 | |
| 359481230 | 1183 | PREDICTED: phospholipid-transporting ATP | 0.936 | 0.520 | 0.792 | 0.0 | |
| 356530169 | 1297 | PREDICTED: phospholipid-transporting ATP | 0.945 | 0.479 | 0.787 | 0.0 | |
| 224140613 | 1112 | aminophospholipid ATPase [Populus tricho | 0.925 | 0.547 | 0.773 | 0.0 | |
| 356566785 | 1305 | PREDICTED: phospholipid-transporting ATP | 0.942 | 0.475 | 0.776 | 0.0 | |
| 224091124 | 1294 | aminophospholipid ATPase [Populus tricho | 0.922 | 0.469 | 0.767 | 0.0 | |
| 449449958 | 1298 | PREDICTED: phospholipid-transporting ATP | 0.931 | 0.472 | 0.754 | 0.0 | |
| 449502673 | 1298 | PREDICTED: LOW QUALITY PROTEIN: phosphol | 0.931 | 0.472 | 0.754 | 0.0 | |
| 115452859 | 851 | Os03g0334700 [Oryza sativa Japonica Grou | 0.930 | 0.719 | 0.687 | 0.0 |
| >gi|255575596|ref|XP_002528698.1| phospholipid-transporting atpase, putative [Ricinus communis] gi|223531870|gb|EEF33687.1| phospholipid-transporting atpase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 1001 bits (2588), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 501/633 (79%), Positives = 548/633 (86%), Gaps = 22/633 (3%)
Query: 1 MELVRLGQSYFMIEDKHMYDSSSGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQ 60
MELVRLGQSYFMI D HMY +SSGSRFQCR+L+INEDLGQIRYIFSDKTGTLTENKMEFQ
Sbjct: 528 MELVRLGQSYFMIGDGHMYCTSSGSRFQCRSLNINEDLGQIRYIFSDKTGTLTENKMEFQ 587
Query: 61 RASVCGKNYGNSLLLAQQVSA----------AAVRRWKLKSEISVDSKLMELLSKDLVGD 110
ASV GK+YG SL++A Q+ A A RWK+ S I VD+KLM+LL KDL G+
Sbjct: 588 MASVYGKDYGGSLVMADQLQADNSSAAAAAAAGQSRWKVASTIPVDAKLMKLLHKDLAGE 647
Query: 111 ERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNG-LLENVEAIDYQGESPDEQALVSAASA 169
ERIAAHEFFLTLAACNTVIPI T RS GC E+VE I+YQGESPDEQALV+AASA
Sbjct: 648 ERIAAHEFFLTLAACNTVIPICTWDRSFGCIESQCCEDVENIEYQGESPDEQALVAAASA 707
Query: 170 YGYTLFERTSGHIVIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADSS 229
YGYTLFERTSGHIVID+NGE LRLDVLG+HEFDSVRKRMSVVIRFP+N+VKVLVKGAD+S
Sbjct: 708 YGYTLFERTSGHIVIDVNGEKLRLDVLGMHEFDSVRKRMSVVIRFPNNAVKVLVKGADTS 767
Query: 230 MFNILAKDSKRNDLIRHITQSHLSEYSSQGLRTLVVASRDLADEELKQWQHRYEDASTSL 289
MF+ILAK++ R+D +R TQSHL+EYSSQGLRTLVVA+RDL +EEL+ WQ R++DASTSL
Sbjct: 768 MFSILAKENGRDDHVRCATQSHLTEYSSQGLRTLVVAARDLTEEELELWQCRFDDASTSL 827
Query: 290 VDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAI 349
DR +KLRQTAALIECDL LLGATGIEDKLQDGVPEAIE+LRQAGIKVWVLTGDKQ+TAI
Sbjct: 828 TDRVTKLRQTAALIECDLNLLGATGIEDKLQDGVPEAIESLRQAGIKVWVLTGDKQETAI 887
Query: 350 SIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYL 409
SI LSCKLLT DM QIIINGNSE EC+ LLADAKA+YGVKSS+R K ++A+ EYL
Sbjct: 888 SIGLSCKLLTMDMVQIIINGNSENECRRLLADAKAKYGVKSSHRGNLALKCHKNADTEYL 947
Query: 410 AISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCC 469
IS + K G LALIIDGNSLVYILEK+LES+LFDLA SCRVVLCC
Sbjct: 948 EIS-EGKTEGTLSG----------PLALIIDGNSLVYILEKELESELFDLAISCRVVLCC 996
Query: 470 RVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAM 529
RVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAM
Sbjct: 997 RVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAM 1056
Query: 530 GQFRFLKRLLLVHGHWNYQRIGYLVLYNFYRNAVFVLMLFWYILFTGFSTTSALTDWSSV 589
GQFRFLKRLLLVHGHWNYQRIGYLVLYNFYRNAVFVLMLFWYIL T FSTTSALTDWSSV
Sbjct: 1057 GQFRFLKRLLLVHGHWNYQRIGYLVLYNFYRNAVFVLMLFWYILCTAFSTTSALTDWSSV 1116
Query: 590 FYSLLYTSVPTIVVGIVDKDLSHKTLMQYPKLY 622
FYS++YTSVPTIVVGI+DKDLSH+TL+ YPKLY
Sbjct: 1117 FYSVIYTSVPTIVVGILDKDLSHRTLLDYPKLY 1149
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356561863|ref|XP_003549196.1| PREDICTED: phospholipid-transporting ATPase 1-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 998 bits (2581), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 499/628 (79%), Positives = 548/628 (87%), Gaps = 6/628 (0%)
Query: 1 MELVRLGQSYFMIEDKHMYDSSSGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQ 60
MELVRLGQSYFMIED MYD++SGSRFQCR+L+INEDLGQIRY+FSDKTGTLTENKMEFQ
Sbjct: 382 MELVRLGQSYFMIEDGDMYDANSGSRFQCRSLNINEDLGQIRYVFSDKTGTLTENKMEFQ 441
Query: 61 RASVCGKNYGNSLLLAQQVSAAAV-----RRWKLKSEISVDSKLMELLSKDLVGDERIAA 115
RASV GK YG+SLL A +AA+ RRWKLKSEI+VDS+LM LL KD DERIAA
Sbjct: 442 RASVHGKKYGSSLLTADNNTAASAANSGKRRWKLKSEIAVDSELMALLQKDSDRDERIAA 501
Query: 116 HEFFLTLAACNTVIPIPTPSRSSGCTNGLL-ENVEAIDYQGESPDEQALVSAASAYGYTL 174
HEFFLTLAACNTVIPI + S SS C G E E+IDYQGESPDEQALVSAAS YGYTL
Sbjct: 502 HEFFLTLAACNTVIPIISSSTSSSCGKGESNEPRESIDYQGESPDEQALVSAASVYGYTL 561
Query: 175 FERTSGHIVIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADSSMFNIL 234
FERTSG+IVID+NGE LRLDVLGLHEFDS RKRMSVVIRFPDN VKVLVKGAD+SMFNIL
Sbjct: 562 FERTSGNIVIDVNGEKLRLDVLGLHEFDSARKRMSVVIRFPDNVVKVLVKGADTSMFNIL 621
Query: 235 AKDSKRNDLIRHITQSHLSEYSSQGLRTLVVASRDLADEELKQWQHRYEDASTSLVDRAS 294
A D+ N+ IRH TQSHL EYS QGLRTLVVASRDL+D EL++WQ YEDASTSL DRA+
Sbjct: 622 APDNSGNNGIRHETQSHLREYSMQGLRTLVVASRDLSDAELEEWQSMYEDASTSLTDRAA 681
Query: 295 KLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALS 354
KLRQTAALIEC+L LLGATGIEDKLQ+GVPEAIE+LRQAGIKVWVLTGDKQ+TAISI LS
Sbjct: 682 KLRQTAALIECNLKLLGATGIEDKLQEGVPEAIESLRQAGIKVWVLTGDKQETAISIGLS 741
Query: 355 CKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISND 414
CKLL+ DMQQIIING SE EC++LLADAK +YGVKSS+R + N K K + I ND
Sbjct: 742 CKLLSADMQQIIINGTSEVECRNLLADAKTKYGVKSSSREQQNLKCKIDSRHGGPDIPND 801
Query: 415 AKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPL 474
K +P+ + KE A LALIIDG SLVYILEK+L+S+LFDLATSCRVVLCCRVAPL
Sbjct: 802 TKSLSMPKWNPGKEEETTAPLALIIDGTSLVYILEKELQSELFDLATSCRVVLCCRVAPL 861
Query: 475 QKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRF 534
QKAGIVDLIKSRTDD+TLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQF+F
Sbjct: 862 QKAGIVDLIKSRTDDLTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFQF 921
Query: 535 LKRLLLVHGHWNYQRIGYLVLYNFYRNAVFVLMLFWYILFTGFSTTSALTDWSSVFYSLL 594
L +LLLVHGHWNYQR+GYL+LYNFYRNAVFVLMLFWYIL T FSTTSALTDWSSVFYS++
Sbjct: 922 LNKLLLVHGHWNYQRVGYLILYNFYRNAVFVLMLFWYILCTAFSTTSALTDWSSVFYSVI 981
Query: 595 YTSVPTIVVGIVDKDLSHKTLMQYPKLY 622
YTS+PTIVVG++DKDLSHKTL+QYPKLY
Sbjct: 982 YTSIPTIVVGVLDKDLSHKTLLQYPKLY 1009
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359481230|ref|XP_002268006.2| PREDICTED: phospholipid-transporting ATPase 1-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 994 bits (2569), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 501/632 (79%), Positives = 553/632 (87%), Gaps = 16/632 (2%)
Query: 1 MELVRLGQSYFMIEDKHMYDSSSGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQ 60
MELVRLGQSYFMIEDKHMYDSSS +RFQCR+L+INEDLGQ+RY+FSDKTGTLTENKMEF+
Sbjct: 391 MELVRLGQSYFMIEDKHMYDSSSDTRFQCRSLNINEDLGQVRYVFSDKTGTLTENKMEFR 450
Query: 61 RASVCGKNYGNSLLLAQ------QVSAAAV--RRWKLKSEISVDSKLMELLSKDLVGDER 112
RASV GKNYG+ L+ A V A V R KLKS+I++D++LMELL KDL GDER
Sbjct: 451 RASVYGKNYGSFLIRADPLEENGSVHATTVEGRGQKLKSQIAIDNELMELLHKDLAGDER 510
Query: 113 IAAHEFFLTLAACNTVIPIPTPSRSSGCT-NGLLENVEAIDYQGESPDEQALVSAASAYG 171
IAAHEFFLTLAACNTVIPIPT S S CT +GL E V AI+YQGESPDEQALV+AASAYG
Sbjct: 511 IAAHEFFLTLAACNTVIPIPTSSAS--CTESGLHEYVGAINYQGESPDEQALVAAASAYG 568
Query: 172 YTLFERTSGHIVIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADSSMF 231
YTLFERTSGHIVID+NGE LRLD+LGLHEFDSVRKRMSVVIRFP+++VKVLVKGADSSMF
Sbjct: 569 YTLFERTSGHIVIDVNGEKLRLDLLGLHEFDSVRKRMSVVIRFPNDTVKVLVKGADSSMF 628
Query: 232 NILAKDSKRNDLIRHITQSHLSEYSSQGLRTLVVASRDLADEELKQWQHRYEDASTSLVD 291
+ILA+DS RN +R TQSHL+EYSSQGLRTLVVA+RDL DEEL +WQ +YEDASTSL D
Sbjct: 629 SILAEDSGRNGHVRPATQSHLTEYSSQGLRTLVVAARDLTDEELSEWQCKYEDASTSLTD 688
Query: 292 RASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISI 351
R+ KLRQTAA IEC L LLGATGIEDKLQDGVPEAIE+LRQAGIKVWVLTGDKQ+TAISI
Sbjct: 689 RSVKLRQTAAFIECKLNLLGATGIEDKLQDGVPEAIESLRQAGIKVWVLTGDKQETAISI 748
Query: 352 ALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAI 411
LS KLLT DM QIIINGNSE+EC+ LLADAKA+Y VKS + K K+ AE+
Sbjct: 749 GLSSKLLTTDMNQIIINGNSEDECRSLLADAKAKYFVKSLDCGSKYLKYKKDAEVTL--- 805
Query: 412 SNDAKFSDVPQGHDVKEVAAIA-SLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCR 470
++ K S +PQ H KE ++ S ALIIDGNSLVYILEKDLES+LFDLATSC+VVLCCR
Sbjct: 806 -DNTKSSTMPQQHSGKEEEMLSTSHALIIDGNSLVYILEKDLESELFDLATSCKVVLCCR 864
Query: 471 VAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMG 530
VAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMG
Sbjct: 865 VAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMG 924
Query: 531 QFRFLKRLLLVHGHWNYQRIGYLVLYNFYRNAVFVLMLFWYILFTGFSTTSALTDWSSVF 590
QFRFLKRLLLVHGHWNYQR+GYLVLYNFYRNAVFVLMLFWYIL T FSTTSALTD SSVF
Sbjct: 925 QFRFLKRLLLVHGHWNYQRVGYLVLYNFYRNAVFVLMLFWYILSTAFSTTSALTDLSSVF 984
Query: 591 YSLLYTSVPTIVVGIVDKDLSHKTLMQYPKLY 622
YSL+YTS+PTIVVGI+DKDL+ +TL+QYP+LY
Sbjct: 985 YSLIYTSIPTIVVGILDKDLNDETLLQYPRLY 1016
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356530169|ref|XP_003533656.1| PREDICTED: phospholipid-transporting ATPase 1-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 989 bits (2556), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 494/627 (78%), Positives = 546/627 (87%), Gaps = 5/627 (0%)
Query: 1 MELVRLGQSYFMIEDKHMYDSSSGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQ 60
MELVRLGQSYFMIED+ MYD+ SGSRFQCR+L+INEDLGQIRY+FSDKTGTLTENKMEFQ
Sbjct: 505 MELVRLGQSYFMIEDRDMYDACSGSRFQCRSLNINEDLGQIRYVFSDKTGTLTENKMEFQ 564
Query: 61 RASVCGKNYGNSLLLAQQVSAAA----VRRWKLKSEISVDSKLMELLSKDLVGDERIAAH 116
RASV GKNYG+SL + +AAA R WKLKS I+VDS+LM +L KD +E+IAAH
Sbjct: 565 RASVHGKNYGSSLPMVDNTAAAADVIPKRSWKLKSAIAVDSELMTMLQKDSNREEKIAAH 624
Query: 117 EFFLTLAACNTVIPIPTPSR-SSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYTLF 175
EFFLTLAACNTVIPI SS TN + E++ IDYQGESPDEQALVSAASAYGYTLF
Sbjct: 625 EFFLTLAACNTVIPILGDDEFSSIGTNEVNEDIRRIDYQGESPDEQALVSAASAYGYTLF 684
Query: 176 ERTSGHIVIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADSSMFNILA 235
ERTSGHIVID+NGE LRLDVLGLHEFDSVRKRMSVVIRFPDN+VKVLVKGAD+SMF+IL
Sbjct: 685 ERTSGHIVIDVNGEKLRLDVLGLHEFDSVRKRMSVVIRFPDNAVKVLVKGADTSMFSILE 744
Query: 236 KDSKRNDLIRHITQSHLSEYSSQGLRTLVVASRDLADEELKQWQHRYEDASTSLVDRASK 295
S+ N+ I H TQSHL+EYSSQGLRTLVVASRDL+ E ++WQ RYE+ASTSL DRA+K
Sbjct: 745 NGSESNNNIWHATQSHLNEYSSQGLRTLVVASRDLSGAEHEEWQSRYEEASTSLTDRATK 804
Query: 296 LRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSC 355
LRQTAALIE +L LLGATGIEDKLQ+GVPEAIEALRQAGIKVWVLTGDKQ+TAISI LSC
Sbjct: 805 LRQTAALIESNLKLLGATGIEDKLQEGVPEAIEALRQAGIKVWVLTGDKQETAISIGLSC 864
Query: 356 KLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDA 415
KLL+ DMQQIIING SE EC++LLADAKA+YGVKSS+ N K K +A L I N +
Sbjct: 865 KLLSGDMQQIIINGTSEVECRNLLADAKAKYGVKSSSGGCRNQKHKTNAGHGDLDIPNGS 924
Query: 416 KFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQ 475
K P+ + E A LALIIDGNSLVYILEK+LES+LFDLATSCRVVLCCRVAPLQ
Sbjct: 925 KSLSFPKCNPGNEEGTDAPLALIIDGNSLVYILEKELESELFDLATSCRVVLCCRVAPLQ 984
Query: 476 KAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFL 535
KAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQF+FL
Sbjct: 985 KAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFQFL 1044
Query: 536 KRLLLVHGHWNYQRIGYLVLYNFYRNAVFVLMLFWYILFTGFSTTSALTDWSSVFYSLLY 595
K+LLLVHGHWNYQR+GYLVLYNFYRNAVFV+MLFWYIL T FSTTSALTDWSSVFYS++Y
Sbjct: 1045 KKLLLVHGHWNYQRVGYLVLYNFYRNAVFVMMLFWYILCTAFSTTSALTDWSSVFYSVIY 1104
Query: 596 TSVPTIVVGIVDKDLSHKTLMQYPKLY 622
TS+PTI+VGI DKDLSH+TL+QYPKLY
Sbjct: 1105 TSIPTIIVGIQDKDLSHRTLLQYPKLY 1131
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224140613|ref|XP_002323676.1| aminophospholipid ATPase [Populus trichocarpa] gi|222868306|gb|EEF05437.1| aminophospholipid ATPase [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 985 bits (2547), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 489/632 (77%), Positives = 545/632 (86%), Gaps = 23/632 (3%)
Query: 1 MELVRLGQSYFMIEDKHMYDSSSGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQ 60
MELVR+GQSYFMI D+HMYDSSS SRFQCR+L+INEDLGQIRY+FSDKTGTLTENKMEFQ
Sbjct: 349 MELVRIGQSYFMIGDRHMYDSSSNSRFQCRSLNINEDLGQIRYVFSDKTGTLTENKMEFQ 408
Query: 61 RASVCGKNYGNSLLLAQQV------SAAAVRRWKLKSEISVDSKLMELLSKDLVGDERIA 114
RASV GKNYG SLL A Q+ A RRWKLKS I+VDS+L+ELL KDLVGDERI
Sbjct: 409 RASVNGKNYGGSLLTADQLLEENVSGATTNRRWKLKSTIAVDSELLELLHKDLVGDERIV 468
Query: 115 AHEFFLTLAACNTVIPIPTPSRSSGCTN-GLLENVEAIDYQGESPDEQALVSAASAYGYT 173
AHEFFL LAACNTV+PI T S CT+ E+VE IDYQGESPDEQALV+AASAYGYT
Sbjct: 469 AHEFFLALAACNTVVPIRTHDGFSSCTDCQFFEDVETIDYQGESPDEQALVAAASAYGYT 528
Query: 174 LFERTSGHIVIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADSSMFNI 233
LFERTSGHIVID+NGE LR VLG+HEFDSVRKRMSVVIRFP+N+VKVLVKGAD+S+ +I
Sbjct: 529 LFERTSGHIVIDVNGEKLRFGVLGMHEFDSVRKRMSVVIRFPNNAVKVLVKGADTSVLSI 588
Query: 234 LAKDSKRNDLIRHI-TQSHLSEYSSQGLRTLVVASRDLADEELKQWQHRYEDASTSLVDR 292
LAKDS +D R TQSHL+EYSSQGLRTLV+A+RDL +EEL+ WQ R++DASTSL DR
Sbjct: 589 LAKDSGIDDRARRAATQSHLTEYSSQGLRTLVIAARDLTEEELELWQCRFDDASTSLTDR 648
Query: 293 ASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIA 352
A+KLRQTAALIECDL LLGAT IEDKLQ+GVPEAIE+LRQAGIKVWVLTGDKQ+TAISI
Sbjct: 649 AAKLRQTAALIECDLNLLGATAIEDKLQEGVPEAIESLRQAGIKVWVLTGDKQETAISIG 708
Query: 353 LSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAIS 412
LSCKLL PDM+QIIINGNSE EC+ LLADAKA+ G+K SN+ ++AEI++L
Sbjct: 709 LSCKLLVPDMEQIIINGNSENECRKLLADAKAKCGLKPSNKGSQYLTCNKNAEIDHL--- 765
Query: 413 NDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVA 472
+ + KE A I+ LIIDGNSLVYILEK+LESDLFD+AT C+VVLCCRVA
Sbjct: 766 ---------ERPERKEEAPIS---LIIDGNSLVYILEKELESDLFDIATYCKVVLCCRVA 813
Query: 473 PLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQF 532
PLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQF
Sbjct: 814 PLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQF 873
Query: 533 RFLKRLLLVHGHWNYQRIGYLVLYNFYRNAVFVLMLFWYILFTGFSTTSALTDWSSVFYS 592
RFL RLLLVHGHWNYQR+GYLVLYNFYRNAVFVLMLFWYILFT FSTTSALTDWSSV YS
Sbjct: 874 RFLNRLLLVHGHWNYQRMGYLVLYNFYRNAVFVLMLFWYILFTAFSTTSALTDWSSVLYS 933
Query: 593 LLYTSVPTIVVGIVDKDLSHKTLMQYPKLYVV 624
++YTSVPTIVVG++DKDLSH+TL++YPK+Y V
Sbjct: 934 VVYTSVPTIVVGVLDKDLSHRTLLRYPKIYGV 965
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356566785|ref|XP_003551608.1| PREDICTED: phospholipid-transporting ATPase 1-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 981 bits (2537), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 493/635 (77%), Positives = 546/635 (85%), Gaps = 15/635 (2%)
Query: 1 MELVRLGQSYFMIEDKHMYDSSSGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQ 60
MELVRLGQSYFMIED+ MYD+SSGSRFQCR+L+INEDLGQIRY+FSDKTGTLTENKMEFQ
Sbjct: 507 MELVRLGQSYFMIEDRDMYDASSGSRFQCRSLNINEDLGQIRYVFSDKTGTLTENKMEFQ 566
Query: 61 RASVCGKNYGNSL------------LLAQQVSAAAVRRWKLKSEISVDSKLMELLSKDLV 108
RASV GKNYG+SL ++A R+WKLKSEI+VDS+LM LL KD
Sbjct: 567 RASVHGKNYGSSLPMVDNTGIQLLLMIAAAEDVIPKRKWKLKSEIAVDSELMTLLQKDSN 626
Query: 109 GDERIAAHEFFLTLAACNTVIPIPTP-SRSSGCTNGLLENVEAIDYQGESPDEQALVSAA 167
+E+IAA+EFFLTLAACNTVIPI + SS TN L E+ IDYQGESPDEQALVSAA
Sbjct: 627 REEKIAANEFFLTLAACNTVIPILSDDGFSSLGTNELNEDTRRIDYQGESPDEQALVSAA 686
Query: 168 SAYGYTLFERTSGHIVIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGAD 227
SAYGYTLFERTSGHIVID+NGE LRLDVLGLHEFDSVRKRMSVVIRFPDN+VKVLVKGAD
Sbjct: 687 SAYGYTLFERTSGHIVIDVNGEKLRLDVLGLHEFDSVRKRMSVVIRFPDNAVKVLVKGAD 746
Query: 228 SSMFNILAKDSKRNDLIRHITQSHLSEYSSQGLRTLVVASRDLADEELKQWQHRYEDAST 287
+SMF+IL S+ N I H T+SHL+EYSSQGLRTLVVASRDL+D EL++WQ +YE+AST
Sbjct: 747 TSMFSILENGSESN--IWHATESHLNEYSSQGLRTLVVASRDLSDAELEEWQSKYEEAST 804
Query: 288 SLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDT 347
SL DRA+KLRQTAALIE +L LLGATGIEDKLQ+GVPEAIEALRQAGIKVWVLTGDKQ+T
Sbjct: 805 SLTDRATKLRQTAALIESNLKLLGATGIEDKLQEGVPEAIEALRQAGIKVWVLTGDKQET 864
Query: 348 AISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIE 407
AISI LSCKLL+ DMQQI ING SE EC++LLADAKA+YGVK S+ N K K +A
Sbjct: 865 AISIGLSCKLLSGDMQQITINGTSEVECRNLLADAKAKYGVKPSSGGHRNLKHKTNAGHG 924
Query: 408 YLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVL 467
L I N +K P+ + E A LALIIDGNSLVYILEK+LES+LFDLATSCRVVL
Sbjct: 925 DLDIPNGSKSLSFPKWNPGNEEGTNAPLALIIDGNSLVYILEKELESELFDLATSCRVVL 984
Query: 468 CCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDF 527
CCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDF
Sbjct: 985 CCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDF 1044
Query: 528 AMGQFRFLKRLLLVHGHWNYQRIGYLVLYNFYRNAVFVLMLFWYILFTGFSTTSALTDWS 587
AMGQF+FLK+LLLVHGHWNYQR+GYLVLYNFYRNAVFV+MLFWYIL T FSTTSALTDWS
Sbjct: 1045 AMGQFQFLKKLLLVHGHWNYQRVGYLVLYNFYRNAVFVMMLFWYILCTAFSTTSALTDWS 1104
Query: 588 SVFYSLLYTSVPTIVVGIVDKDLSHKTLMQYPKLY 622
SVFYS++YTS+PTI+VGI DKDLSH+TL+QYPKLY
Sbjct: 1105 SVFYSVIYTSIPTIIVGIQDKDLSHRTLLQYPKLY 1139
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224091124|ref|XP_002309187.1| aminophospholipid ATPase [Populus trichocarpa] gi|222855163|gb|EEE92710.1| aminophospholipid ATPase [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 973 bits (2516), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 485/632 (76%), Positives = 551/632 (87%), Gaps = 25/632 (3%)
Query: 1 MELVRLGQSYFMIEDKHMYDSSSGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQ 60
MELVR+GQSYFMI D+HM+DSSSGSRFQCR+L+INEDLGQIRY+FSDKTGTLTENKMEF+
Sbjct: 515 MELVRIGQSYFMIGDRHMFDSSSGSRFQCRSLNINEDLGQIRYVFSDKTGTLTENKMEFR 574
Query: 61 RASVCGKNYGNSLLLAQQ-----VSAAAV-RRWKLKSEISVDSKLMELLSKDLVGDERIA 114
RASV GK+YG S L A+Q +SAA +RWKLKS I+VDS+L++LL KDLVGDERI
Sbjct: 575 RASVNGKSYGGSSLTAEQLLEENISAATTQKRWKLKSTITVDSELLKLLHKDLVGDERIV 634
Query: 115 AHEFFLTLAACNTVIPIPTPSRSSGCTNG-LLENVEAIDYQGESPDEQALVSAASAYGYT 173
AHEFFL LAACNTVIP+ T S CT+ + E+VE IDYQGESPDEQALV+AASAYGYT
Sbjct: 635 AHEFFLALAACNTVIPVRTHDGFSSCTDSQIFEDVETIDYQGESPDEQALVAAASAYGYT 694
Query: 174 LFERTSGHIVIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADSSMFNI 233
LFERTSGHIVID+NGE LRL VLG+HEFDSVRKRMSVVIR+P+++VKVLVKGADSS+ +I
Sbjct: 695 LFERTSGHIVIDVNGEKLRLGVLGMHEFDSVRKRMSVVIRYPNDAVKVLVKGADSSVLSI 754
Query: 234 LAKDSKRNDLIRH-ITQSHLSEYSSQGLRTLVVASRDLADEELKQWQHRYEDASTSLVDR 292
LAKD ++D R T SHL+EYSSQGLRTLV+A+RDL +EEL+ WQ R++DASTSL DR
Sbjct: 755 LAKDLGKDDHARRSATYSHLTEYSSQGLRTLVIAARDLTEEELELWQCRFDDASTSLTDR 814
Query: 293 ASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIA 352
A++LRQTAALIECDL LLGAT IEDKLQ+GVPEAIE+LRQAGIKVWVLTGDKQ+TA+SI
Sbjct: 815 AARLRQTAALIECDLNLLGATAIEDKLQEGVPEAIESLRQAGIKVWVLTGDKQETAMSIG 874
Query: 353 LSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAIS 412
LSCKLLTPDM+QIIINGNSE +C+ LL+DAKA+ G+ SN K + LK +AE++YL
Sbjct: 875 LSCKLLTPDMEQIIINGNSENDCRKLLSDAKAKCGLNLSN--KGSQYLKCNAEMDYL--Q 930
Query: 413 NDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVA 472
+ +VP LALIIDGNSLVYILEK+LES+LFD+AT C+VVLCCRVA
Sbjct: 931 RPERKEEVP-------------LALIIDGNSLVYILEKELESELFDIATYCKVVLCCRVA 977
Query: 473 PLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQF 532
PLQKAGIVDLIKSR+DDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQF
Sbjct: 978 PLQKAGIVDLIKSRSDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQF 1037
Query: 533 RFLKRLLLVHGHWNYQRIGYLVLYNFYRNAVFVLMLFWYILFTGFSTTSALTDWSSVFYS 592
RFLKRLLLVHGHWNYQRIGYL+LYNFYRNAVFVLMLFWYILFT FSTTSALTDWSSV YS
Sbjct: 1038 RFLKRLLLVHGHWNYQRIGYLILYNFYRNAVFVLMLFWYILFTAFSTTSALTDWSSVLYS 1097
Query: 593 LLYTSVPTIVVGIVDKDLSHKTLMQYPKLYVV 624
++YTSVPTIVVGI+DKDLSH+TL+QYPKLY V
Sbjct: 1098 VIYTSVPTIVVGILDKDLSHRTLLQYPKLYGV 1129
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449449958|ref|XP_004142731.1| PREDICTED: phospholipid-transporting ATPase 1-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 969 bits (2504), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 480/636 (75%), Positives = 540/636 (84%), Gaps = 23/636 (3%)
Query: 1 MELVRLGQSYFMIEDKHMYDSSSGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQ 60
ME+VRLGQSYFMIEDKHMY +S SRFQCR+L+INEDLGQ+RYIFSDKTGTLTENKMEF+
Sbjct: 503 MEMVRLGQSYFMIEDKHMYCRASSSRFQCRSLNINEDLGQVRYIFSDKTGTLTENKMEFK 562
Query: 61 RASVCGKNYGNSL------LLAQQVSAAAVRRWKLKSEISVDSKLMELLSKDLVGDERIA 114
RASV GKNYG++L +L + RRWKLKSE++VD++L++LL KDL GDE+IA
Sbjct: 563 RASVHGKNYGSNLSEEYPSMLYSIPATLGRRRWKLKSEVAVDTELIKLLHKDLNGDEKIA 622
Query: 115 AHEFFLTLAACNTVIPIPTPSRSSGCTNGLL--ENVEAIDYQGESPDEQALVSAASAYGY 172
AHEFFLTLAACNTVIPI +S+ NG L E E I+YQGESPDEQALV+AASAYGY
Sbjct: 623 AHEFFLTLAACNTVIPIHMDDKSN-YANGELSEEGFETINYQGESPDEQALVAAASAYGY 681
Query: 173 TLFERTSGHIVIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADSSMFN 232
TLFERTSGHIVID+NGE LRLDVLGLHEFDSVRKRMSVVIRFPDN++KVLVKGAD+SM N
Sbjct: 682 TLFERTSGHIVIDVNGENLRLDVLGLHEFDSVRKRMSVVIRFPDNTIKVLVKGADTSMLN 741
Query: 233 ILAKDSKRNDLIRHITQSHLSEYSSQGLRTLVVASRDLADEELKQWQHRYEDASTSLVDR 292
I + DS R++ I+ T++HL EYS +GLRTLVVA++DL D E + WQ RYEDASTSL +R
Sbjct: 742 ITSIDSDRDEFIKLTTENHLCEYSKEGLRTLVVAAKDLNDSEFELWQSRYEDASTSLTER 801
Query: 293 ASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIA 352
A KLRQTAALIECDL LLGAT IEDKLQDGVPEAIE+LRQAGIKVW+LTGDKQ+TAISI
Sbjct: 802 AVKLRQTAALIECDLKLLGATAIEDKLQDGVPEAIESLRQAGIKVWILTGDKQETAISIG 861
Query: 353 LSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAIS 412
LSCKLLT DMQ I+INGNSE +C+ LLADA A+YG+KS T+C S+ + E
Sbjct: 862 LSCKLLTSDMQSIVINGNSENDCRQLLADALAKYGIKS---TQCGSQRPKLRNCE----- 913
Query: 413 NDAKFSDVPQGHDV------KEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVV 466
N+ D+P+ + KE LALIIDGNSLVYILEK+LES+LFDLATSC VV
Sbjct: 914 NECHDHDIPKTPSMSDFTEGKEDLTDKPLALIIDGNSLVYILEKELESELFDLATSCDVV 973
Query: 467 LCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASD 526
LCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASD
Sbjct: 974 LCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASD 1033
Query: 527 FAMGQFRFLKRLLLVHGHWNYQRIGYLVLYNFYRNAVFVLMLFWYILFTGFSTTSALTDW 586
FAMGQFRFLKRLLLVHGHWNYQR+GY+VLYNFYRNAVFVLMLFWYIL T FSTTSALTDW
Sbjct: 1034 FAMGQFRFLKRLLLVHGHWNYQRVGYMVLYNFYRNAVFVLMLFWYILCTAFSTTSALTDW 1093
Query: 587 SSVFYSLLYTSVPTIVVGIVDKDLSHKTLMQYPKLY 622
SSVFYS++YTS+PTI VGI+DKDLSHKTL+QYPKLY
Sbjct: 1094 SSVFYSVIYTSIPTIFVGILDKDLSHKTLLQYPKLY 1129
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449502673|ref|XP_004161710.1| PREDICTED: LOW QUALITY PROTEIN: phospholipid-transporting ATPase 1-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 968 bits (2503), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 480/636 (75%), Positives = 539/636 (84%), Gaps = 23/636 (3%)
Query: 1 MELVRLGQSYFMIEDKHMYDSSSGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQ 60
ME+VRLGQSYFMIEDKHMY +S SRFQCR+L INEDLGQ+RYIFSDKTGTLTENKMEF+
Sbjct: 503 MEMVRLGQSYFMIEDKHMYCRASSSRFQCRSLXINEDLGQVRYIFSDKTGTLTENKMEFK 562
Query: 61 RASVCGKNYGNSL------LLAQQVSAAAVRRWKLKSEISVDSKLMELLSKDLVGDERIA 114
RASV GKNYG++L +L + RRWKLKSE++VD++L++LL KDL GDE+IA
Sbjct: 563 RASVHGKNYGSNLSEEYPSMLYSIPATLGRRRWKLKSEVAVDTELIKLLHKDLNGDEKIA 622
Query: 115 AHEFFLTLAACNTVIPIPTPSRSSGCTNGLL--ENVEAIDYQGESPDEQALVSAASAYGY 172
AHEFFLTLAACNTVIPI +S+ NG L E E I+YQGESPDEQALV+AASAYGY
Sbjct: 623 AHEFFLTLAACNTVIPIHMDDKSN-YANGELSEEGFETINYQGESPDEQALVAAASAYGY 681
Query: 173 TLFERTSGHIVIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADSSMFN 232
TLFERTSGHIVID+NGE LRLDVLGLHEFDSVRKRMSVVIRFPDN++KVLVKGAD+SM N
Sbjct: 682 TLFERTSGHIVIDVNGENLRLDVLGLHEFDSVRKRMSVVIRFPDNTIKVLVKGADTSMLN 741
Query: 233 ILAKDSKRNDLIRHITQSHLSEYSSQGLRTLVVASRDLADEELKQWQHRYEDASTSLVDR 292
I + DS R++ I+ T++HL EYS +GLRTLVVA++DL D E + WQ RYEDASTSL +R
Sbjct: 742 ITSIDSDRDEFIKLTTENHLCEYSKEGLRTLVVAAKDLNDSEFELWQSRYEDASTSLTER 801
Query: 293 ASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIA 352
A KLRQTAALIECDL LLGAT IEDKLQDGVPEAIE+LRQAGIKVW+LTGDKQ+TAISI
Sbjct: 802 AVKLRQTAALIECDLKLLGATAIEDKLQDGVPEAIESLRQAGIKVWILTGDKQETAISIG 861
Query: 353 LSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAIS 412
LSCKLLT DMQ I+INGNSE +C+ LLADA A+YG+KS T+C S+ + E
Sbjct: 862 LSCKLLTSDMQSIVINGNSENDCRQLLADALAKYGIKS---TQCGSQRPKLRNCE----- 913
Query: 413 NDAKFSDVPQGHDV------KEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVV 466
N+ D+P+ + KE LALIIDGNSLVYILEK+LES+LFDLATSC VV
Sbjct: 914 NECHDHDIPKTPSMSDFTEGKEDLTDKPLALIIDGNSLVYILEKELESELFDLATSCDVV 973
Query: 467 LCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASD 526
LCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASD
Sbjct: 974 LCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASD 1033
Query: 527 FAMGQFRFLKRLLLVHGHWNYQRIGYLVLYNFYRNAVFVLMLFWYILFTGFSTTSALTDW 586
FAMGQFRFLKRLLLVHGHWNYQR+GY+VLYNFYRNAVFVLMLFWYIL T FSTTSALTDW
Sbjct: 1034 FAMGQFRFLKRLLLVHGHWNYQRVGYMVLYNFYRNAVFVLMLFWYILCTAFSTTSALTDW 1093
Query: 587 SSVFYSLLYTSVPTIVVGIVDKDLSHKTLMQYPKLY 622
SSVFYS++YTS+PTI VGI+DKDLSHKTL+QYPKLY
Sbjct: 1094 SSVFYSVIYTSIPTIFVGILDKDLSHKTLLQYPKLY 1129
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|115452859|ref|NP_001050030.1| Os03g0334700 [Oryza sativa Japonica Group] gi|113548501|dbj|BAF11944.1| Os03g0334700, partial [Oryza sativa Japonica Group] | Back alignment and taxonomy information |
|---|
Score = 894 bits (2310), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 453/659 (68%), Positives = 536/659 (81%), Gaps = 47/659 (7%)
Query: 1 MELVRLGQSYFMIEDKHMYDSSSGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQ 60
MELVR+GQSYFMI D MYDSSSGSRFQCR+L+INEDLGQIRYIFSDKTGTLT+NKMEF
Sbjct: 36 MELVRVGQSYFMIGDTRMYDSSSGSRFQCRSLNINEDLGQIRYIFSDKTGTLTQNKMEFH 95
Query: 61 RASVCGKNYGNSLLL----AQQVSAAAVRRW---KLKSEISVDSKLMELLSKDLVGDERI 113
+AS+ GKNYG+ L + + ++S R K KS ++VD++L+ LLS+ LVG+ER+
Sbjct: 96 QASIYGKNYGSPLQVTGDSSYEISTTESSRQQGSKSKSGVNVDAELIALLSQPLVGEERL 155
Query: 114 AAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYT 173
+AH+FFLTLAACNTVIP+ T + S N + E + IDYQGESPDEQALV+AASAYGYT
Sbjct: 156 SAHDFFLTLAACNTVIPVSTEN-SLDLVNEINE-IGRIDYQGESPDEQALVTAASAYGYT 213
Query: 174 LFERTSGHIVIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADSSMFNI 233
L ERT+GHIV+D+ GE +RLDVLGLHEFDSVRKRMSVV+RFPDN VKVLVKGAD+SM +I
Sbjct: 214 LVERTTGHIVVDVQGEKIRLDVLGLHEFDSVRKRMSVVVRFPDNIVKVLVKGADTSMLSI 273
Query: 234 LAK---DSKRNDL---IRHITQSHLSEYSSQGLRTLVVASRDLADEELKQWQHRYEDAST 287
L + D N L IR T++HLS YSS+GLRTLV+ S++L D E +WQ RYE+AST
Sbjct: 274 LRREDDDELHNSLHAKIRETTENHLSGYSSEGLRTLVIGSKNLTDAEFGEWQERYEEAST 333
Query: 288 SLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDT 347
S+ +R++KLRQ AAL+EC+LTLLGATGIEDKLQDGVPEAIE+LRQAGIKVWVLTGDKQ+T
Sbjct: 334 SMTERSAKLRQAAALVECNLTLLGATGIEDKLQDGVPEAIESLRQAGIKVWVLTGDKQET 393
Query: 348 AISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTK-CN--------- 397
AISI LSC+LLT +M I+ING+SE EC+ LLADAKA++G+KSS+ + C
Sbjct: 394 AISIGLSCRLLTQNMHLIVINGSSEFECRRLLADAKAKFGIKSSDSGRDCQDIEHTHNGD 453
Query: 398 -SKLKRSA-----------EIEYLAISNDAKFSDVPQGHDVKEVAAIAS--LALIIDGNS 443
SKL+ S E+ + S+ +++S+ +VA A LAL+IDG+S
Sbjct: 454 VSKLRTSNGHMSESGIHNFELTGVIASDKSEYSE--------KVANFADTDLALVIDGSS 505
Query: 444 LVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSM 503
LVYILEKDLES+LFDLATSC+VV+CCRVAPLQKAGIVDLIKSRT DMTLAIGDGANDVSM
Sbjct: 506 LVYILEKDLESELFDLATSCKVVICCRVAPLQKAGIVDLIKSRTSDMTLAIGDGANDVSM 565
Query: 504 IQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLVHGHWNYQRIGYLVLYNFYRNAV 563
IQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLVHGHWNYQRI Y++LYNFYRNAV
Sbjct: 566 IQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLVHGHWNYQRIAYMILYNFYRNAV 625
Query: 564 FVLMLFWYILFTGFSTTSALTDWSSVFYSLLYTSVPTIVVGIVDKDLSHKTLMQYPKLY 622
FVLMLFWYIL T +S T ALTDWSSVFYSL+YTS+PT+VVGI+DKDLSH TL+ YP+LY
Sbjct: 626 FVLMLFWYILHTAYSATLALTDWSSVFYSLIYTSIPTVVVGILDKDLSHNTLLHYPRLY 684
|
Source: Oryza sativa Japonica Group Species: Oryza sativa Genus: Oryza Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 658 | ||||||
| TAIR|locus:3355727 | 1158 | ALA1 "aminophospholipid ATPase | 0.566 | 0.322 | 0.561 | 8.7e-186 | |
| UNIPROTKB|E2RB85 | 1512 | ATP10A "Uncharacterized protei | 0.694 | 0.302 | 0.479 | 9.8e-132 | |
| ZFIN|ZDB-GENE-090313-231 | 1365 | atp10d "ATPase, class V, type | 0.382 | 0.184 | 0.462 | 2.1e-131 | |
| UNIPROTKB|O60312 | 1499 | ATP10A "Probable phospholipid- | 0.705 | 0.309 | 0.465 | 1.4e-128 | |
| UNIPROTKB|F1SNS2 | 1278 | ATP10A "Uncharacterized protei | 0.700 | 0.360 | 0.475 | 4e-128 | |
| MGI|MGI:1330809 | 1508 | Atp10a "ATPase, class V, type | 0.712 | 0.311 | 0.473 | 1.5e-127 | |
| UNIPROTKB|F1LRP2 | 1508 | Atp10a "Protein Atp10a" [Rattu | 0.712 | 0.311 | 0.461 | 2.6e-127 | |
| ZFIN|ZDB-GENE-101102-1 | 1524 | atp10a "ATPase, class V, type | 0.737 | 0.318 | 0.442 | 1.5e-125 | |
| UNIPROTKB|F1NER7 | 1516 | ATP10A "Uncharacterized protei | 0.689 | 0.299 | 0.471 | 4.9e-123 | |
| UNIPROTKB|J9PB95 | 1460 | ATP10A "Uncharacterized protei | 0.282 | 0.127 | 0.524 | 1e-122 |
| TAIR|locus:3355727 ALA1 "aminophospholipid ATPase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1012 (361.3 bits), Expect = 8.7e-186, Sum P(3) = 8.7e-186
Identities = 218/388 (56%), Positives = 268/388 (69%)
Query: 1 MELVRLGQSYFMIEDKHMYDSSSGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQ 60
MELVR+GQ+YFM D MYD SS S FQCR L+INEDLGQI+Y+FSDKTGTLT+NKMEFQ
Sbjct: 411 MELVRIGQAYFMTNDDQMYDESSDSSFQCRALNINEDLGQIKYLFSDKTGTLTDNKMEFQ 470
Query: 61 RASVCGKNYGNXXXXXXX----XXXXXXXXWKLKSEISVDSKLMELLSKDLVGDERIAAH 116
A + G +Y + K K + VD L++L +E A+
Sbjct: 471 CACIEGVDYSDREPADSEHPGYSIEVDGIILKPKMRVRVDPVLLQLTKTGKATEEAKRAN 530
Query: 117 EFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYTLFE 176
EFFL+LAACNT++PI S +S NV+ +DYQGESPDEQALV AA+AYG+ L E
Sbjct: 531 EFFLSLAACNTIVPIV--SNTSD------PNVKLVDYQGESPDEQALVYAAAAYGFLLIE 582
Query: 177 RTSGHIVIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADSSMFNILAK 236
RTSGHIVI++ GE R +VLGLHEFDS RKRMSV++ PD SVK+ VKGADSSMF ++
Sbjct: 583 RTSGHIVINVRGETQRFNVLGLHEFDSDRKRMSVILGCPDMSVKLFVKGADSSMFGVM-- 640
Query: 237 DSKRNDLIRHITQSHLSEYSSQGLRTLVVASRDLADEELKQWQHRYEDASTSLVDRASKL 296
D +I H T+ L YSS GLRTLVV R+L D E +QW +E AST+L+ RA L
Sbjct: 641 DESYGGVI-HETKIQLHAYSSDGLRTLVVGMRELNDSEFEQWHSSFEAASTALIGRAGLL 699
Query: 297 RQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCK 356
R+ A IE +L ++GAT IEDKLQ GVPEAIE+LR AGIKVWVLTGDKQ+TAISI S +
Sbjct: 700 RKVAGNIETNLRIVGATAIEDKLQRGVPEAIESLRIAGIKVWVLTGDKQETAISIGFSSR 759
Query: 357 LLTPDMQQIIINGNSEEECKDLLADAKA 384
LLT +M+QI+IN NS + C+ L +A A
Sbjct: 760 LLTRNMRQIVINSNSLDSCRRSLEEANA 787
|
|
| UNIPROTKB|E2RB85 ATP10A "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 1050 (374.7 bits), Expect = 9.8e-132, Sum P(4) = 9.8e-132
Identities = 229/478 (47%), Positives = 312/478 (65%)
Query: 153 YQGESPDEQALVSAASAYGYTLFERTSGHIVIDINGEG-LRLDVLGLHEFDSVRKRMSVV 211
Y+ ESPDE ALV AA AY L +R + +++ G L ++L + FDS+RKRMSVV
Sbjct: 708 YEAESPDEAALVYAARAYNCALVDRLHDQVSVELPHLGRLTFELLHILGFDSIRKRMSVV 767
Query: 212 IRFP-DNSVKVLVKGADSSMFNIL---AKDSKRN---DLIRHITQSHLSEYSSQGLRTLV 264
IR P + + V KGADS + ++L + D R IR TQ++L+ Y+ +GLRTL
Sbjct: 768 IRHPLTDEINVYTKGADSVVMDLLLPCSSDDARGRHQKKIRSKTQNYLNLYAVEGLRTLC 827
Query: 265 VASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVP 324
+A R L+ EE W + +A +SL +R L Q+A +E +L LLGATGIED+LQDGVP
Sbjct: 828 IAKRVLSKEEYACWLQSHLEAESSLDNREELLFQSAIRLETNLHLLGATGIEDRLQDGVP 887
Query: 325 EAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKA 384
E I LRQAG+++WVLTGDKQ+TAI+IA +CKLL D + I +N S+E C LL D
Sbjct: 888 ETIAKLRQAGLQIWVLTGDKQETAINIAYACKLLDHDEEVITLNAESQEACAALL-DQCL 946
Query: 385 RYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSL 444
Y VKS ++ C++ K + FS P + S +L+IDG SL
Sbjct: 947 HY-VKS--KSPCSTPQKTEGNVS-------VGFS--PLCPPSTSTTSGPSPSLVIDGRSL 994
Query: 445 VYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSMI 504
Y L+K+LE LA CR VLCCR PLQK+ +V L++S+ MTLAIGDGANDVSMI
Sbjct: 995 AYALDKNLEDKFLFLAKQCRSVLCCRSTPLQKSMVVKLVRSKLKAMTLAIGDGANDVSMI 1054
Query: 505 QMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLVHGHWNYQRIGYLVLYNFYRNAVF 564
Q+ADVGVGI GQEG QAVMASDFA+ +FR+L+RLL+VHGHW Y R+ +VLY FY+N +F
Sbjct: 1055 QVADVGVGISGQEGMQAVMASDFAVPRFRYLERLLIVHGHWCYSRLANMVLYFFYKNTMF 1114
Query: 565 VLMLFWYILFTGFSTTSALTDWSSVFYSLLYTSVPTIVVGIVDKDLSHKTLMQYPKLY 622
V +LFW+ + GFS ++ + W +F++LL++S+P +V G++DKD+ L+ P+LY
Sbjct: 1115 VGLLFWFQFYCGFSASAMIDQWYLIFFNLLFSSLPQLVTGVLDKDVPADVLLTAPQLY 1172
|
|
| ZFIN|ZDB-GENE-090313-231 atp10d "ATPase, class V, type 10D" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 601 (216.6 bits), Expect = 2.1e-131, Sum P(4) = 2.1e-131
Identities = 123/266 (46%), Positives = 175/266 (65%)
Query: 357 LLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAK 416
+LT D Q+ IN CK LL ++ C ++L+ E++ L + K
Sbjct: 907 VLTGDKQETAIN--IAFACK-LLRPTDHILMANCDSKEACEARLQ---ELQ-LEVQQVTK 959
Query: 417 FSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQK 476
+D P+G I+ L+IDG +L Y L+K+L+ DL CR V+CCR PLQK
Sbjct: 960 -ADEPEGD------CISDCVLVIDGRTLDYALQKELQGAFLDLTCCCRSVICCRSTPLQK 1012
Query: 477 AGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLK 536
+ +V L++ + + MTLAIGDGANDVSMIQMADVGVGI GQEG QAVM+SDFA+ +F+FL+
Sbjct: 1013 SQVVRLVRDKLEVMTLAIGDGANDVSMIQMADVGVGISGQEGMQAVMSSDFAISRFKFLR 1072
Query: 537 RLLLVHGHWNYQRIGYLVLYNFYRNAVFVLMLFWYILFTGFSTTSALTDWSSVFYSLLYT 596
+L+LVHGHW Y R+ ++LY FY+N ++V +LFWY F GFS ++ W +F++LL+T
Sbjct: 1073 KLILVHGHWCYARLANMILYFFYKNVMYVNLLFWYQFFCGFSGSTMTNSWVLIFFNLLFT 1132
Query: 597 SVPTIVVGIVDKDLSHKTLMQYPKLY 622
SVP +V G++DKD+S +TL++ P LY
Sbjct: 1133 SVPPLVYGVLDKDVSAETLLKLPDLY 1158
|
|
| UNIPROTKB|O60312 ATP10A "Probable phospholipid-transporting ATPase VA" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 1041 (371.5 bits), Expect = 1.4e-128, Sum P(3) = 1.4e-128
Identities = 226/485 (46%), Positives = 311/485 (64%)
Query: 146 ENVEAIDYQGESPDEQALVSAASAYGYTLFERTSGHIVIDINGEG-LRLDVLGLHEFDSV 204
E+ + Y+ ESPDE ALV AA AY L ER + +++ G L ++L FDSV
Sbjct: 686 ESERELRYEAESPDEAALVYAARAYNCVLVERLHDQVSVELPHLGRLTFELLHTLGFDSV 745
Query: 205 RKRMSVVIRFP-DNSVKVLVKGADSSMFNILAKDS------KRNDLIRHITQSHLSEYSS 257
RKRMSVVIR P + + V KGADS + ++L S + IR TQ++L+ Y++
Sbjct: 746 RKRMSVVIRHPLTDEINVYTKGADSVVMDLLQPCSSVDARGRHQKKIRSKTQNYLNVYAA 805
Query: 258 QGLRTLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIED 317
+GLRTL +A R L+ EE W + +A +SL + L Q+A +E +L LLGATGIED
Sbjct: 806 EGLRTLCIAKRVLSKEEYACWLQSHLEAESSLENSEELLFQSAIRLETNLHLLGATGIED 865
Query: 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKD 377
+LQDGVPE I LRQAG+++WVLTGDKQ+TA++IA +CKLL D + I +N S+E C
Sbjct: 866 RLQDGVPETISKLRQAGLQIWVLTGDKQETAVNIAYACKLLDHDEEVITLNATSQEACAA 925
Query: 378 LLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLAL 437
LL D Y V+S + K K + + ++ P A+ +L
Sbjct: 926 LL-DQCLCY-VQSRGLQRAPEKTKGKVSMRFSSLC--------PPS---TSTASGRRPSL 972
Query: 438 IIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDG 497
+IDG SL Y LEK+LE LA CR VLCCR PLQK+ +V L++S+ MTLAIGDG
Sbjct: 973 VIDGRSLAYALEKNLEDKFLFLAKQCRSVLCCRSTPLQKSMVVKLVRSKLKAMTLAIGDG 1032
Query: 498 ANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLVHGHWNYQRIGYLVLYN 557
ANDVSMIQ+ADVGVGI GQEG QAVMASDFA+ +FR+L+RLL++HGHW Y R+ +VLY
Sbjct: 1033 ANDVSMIQVADVGVGISGQEGMQAVMASDFAVPKFRYLERLLILHGHWCYSRLANMVLYF 1092
Query: 558 FYRNAVFVLMLFWYILFTGFSTTSALTDWSSVFYSLLYTSVPTIVVGIVDKDLSHKTLMQ 617
FY+N +FV +LFW+ F GFS ++ + W +F++LL++S+P +V G++D+D+ L+
Sbjct: 1093 FYKNTMFVGLLFWFQFFCGFSASTMIDQWYLIFFNLLFSSLPPLVTGVLDRDVPANVLLT 1152
Query: 618 YPKLY 622
P+LY
Sbjct: 1153 NPQLY 1157
|
|
| UNIPROTKB|F1SNS2 ATP10A "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 1030 (367.6 bits), Expect = 4.0e-128, Sum P(3) = 4.0e-128
Identities = 229/482 (47%), Positives = 312/482 (64%)
Query: 149 EAIDYQGESPDEQALVSAASAYGYTLFERTSGHIVIDINGEG-LRLDVLGLHEFDSVRKR 207
E + Y+ ++ E ALV AA AY TL +R + +++ G L ++L FDS+RKR
Sbjct: 479 EELRYEADTSGEAALVYAARAYFCTLVDRLHDQVSVELPHLGRLTFELLHTLGFDSIRKR 538
Query: 208 MSVVIRFP-DNSVKVLVKGADSSMFNIL----AKDSK-RNDL-IRHITQSHLSEYSSQGL 260
MSVVIR P + + V KGADS + ++L D++ R+ + IR TQ++L+ Y+ +GL
Sbjct: 539 MSVVIRHPLTDEINVYTKGADSVVMDLLLPCSTDDARGRHQMKIRSKTQNYLNLYAVEGL 598
Query: 261 RTLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQ 320
RTL +A R L+ EE W + +A +SL +R L Q+A +E +L LLGATGIED+LQ
Sbjct: 599 RTLCIAKRVLSKEEYACWLQSHLEAESSLDNREELLFQSAIRLETNLHLLGATGIEDRLQ 658
Query: 321 DGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLA 380
DGVPE I LRQAG+++WVLTGDKQ+TAI+IA +CKLL D + I +N S+E C LL
Sbjct: 659 DGVPETIAKLRQAGLQIWVLTGDKQETAINIAYACKLLDHDEEVITLNAESQEACAALL- 717
Query: 381 DAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIID 440
D Y S+ SA E A S FS P + S +L+ID
Sbjct: 718 DQCLHY---------VQSRSPHSAP-EKTASSVSVSFS--PVCPPLVTTTPSPSPSLVID 765
Query: 441 GNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGAND 500
G SL Y LEK+LE LA CR VLCCR PLQK+ +V L++S+ MTLAIGDGAND
Sbjct: 766 GRSLAYALEKNLEDKFLFLAKQCRSVLCCRSTPLQKSMVVKLVRSKLKAMTLAIGDGAND 825
Query: 501 VSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLVHGHWNYQRIGYLVLYNFYR 560
VSMIQ+ADVGVGI GQEG QAVMASDFA+ +FR+L+RLL+VHGHW Y R+ +VLY FY+
Sbjct: 826 VSMIQVADVGVGISGQEGMQAVMASDFAVPRFRYLERLLIVHGHWCYSRLANMVLYFFYK 885
Query: 561 NAVFVLMLFWYILFTGFSTTSALTDWSSVFYSLLYTSVPTIVVGIVDKDLSHKTLMQYPK 620
N +FV +LFW+ + GFS ++ + W +F++LL++S+P +V G++DKD+ L+ P+
Sbjct: 886 NTMFVGLLFWFQFYCGFSASAMIDQWYLIFFNLLFSSLPQLVTGVLDKDVPADVLLTKPQ 945
Query: 621 LY 622
LY
Sbjct: 946 LY 947
|
|
| MGI|MGI:1330809 Atp10a "ATPase, class V, type 10A" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 1039 (370.8 bits), Expect = 1.5e-127, Sum P(3) = 1.5e-127
Identities = 233/492 (47%), Positives = 314/492 (63%)
Query: 140 CTNGLLENVEA-IDYQGESPDEQALVSAASAYGYTLFERTSGHIVIDINGEG-LRLDVLG 197
C E E + Y+ ESPDE ALV AA AY L +R + +++ G L ++L
Sbjct: 694 CPGEQREQQEGELRYEAESPDEAALVYAARAYNCALVDRLHDQVSVELPHLGRLTFELLH 753
Query: 198 LHEFDSVRKRMSVVIRFP-DNSVKVLVKGADSSMFNIL---AKDSKRN---DLIRHITQS 250
FDS+RKRMSVVIR P + + V KGADS + ++L + D R IR TQ+
Sbjct: 754 TLGFDSIRKRMSVVIRHPLTDEINVYTKGADSVVMDLLLPCSSDDARGRHQKKIRSKTQN 813
Query: 251 HLSEYSSQGLRTLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLL 310
+L+ Y+ +GLRTL +A R L+ EE W + +A S+ R L Q+A +E +L LL
Sbjct: 814 YLNLYAVEGLRTLCIAKRVLSKEEYACWLQSHIEAEASVESREELLFQSAVRLETNLHLL 873
Query: 311 GATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGN 370
GATGIED+LQ+GVPE I LRQAG+++WVLTGDKQ+TAI+IA +CKLL + I +N +
Sbjct: 874 GATGIEDRLQEGVPETIAKLRQAGLQIWVLTGDKQETAINIAYACKLLDHGEEVITLNAD 933
Query: 371 SEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVA 430
S+E C LL D Y V+S N S L+ S +S F+ V D
Sbjct: 934 SQEACAALL-DQCLSY-VQSRNP---RSTLQNSES----NLSVGFSFNPVSTSTD----- 979
Query: 431 AIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDM 490
A S +L+IDG SL Y LEK LE LA CR VLCCR PLQK+ +V L++S+ M
Sbjct: 980 ASPSPSLVIDGRSLAYALEKSLEDKFLFLAKQCRSVLCCRSTPLQKSMVVKLVRSKLKAM 1039
Query: 491 TLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLVHGHWNYQRI 550
TLAIGDGANDVSMIQ+ADVGVGI GQEG QAVMASDFA+ +FR+L+RLL+VHGHW Y R+
Sbjct: 1040 TLAIGDGANDVSMIQVADVGVGISGQEGMQAVMASDFAVPRFRYLERLLIVHGHWCYSRL 1099
Query: 551 GYLVLYNFYRNAVFVLMLFWYILFTGFSTTSALTDWSSVFYSLLYTSVPTIVVGIVDKDL 610
+VLY FY+N +FV +LFW+ + GFS ++ + W +F++LL++S+P +V G++DKD+
Sbjct: 1100 ANMVLYFFYKNTMFVGLLFWFQFYCGFSASAMIDQWYLIFFNLLFSSLPQLVTGVLDKDV 1159
Query: 611 SHKTLMQYPKLY 622
L++ P+LY
Sbjct: 1160 PADMLLREPQLY 1171
|
|
| UNIPROTKB|F1LRP2 Atp10a "Protein Atp10a" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 1037 (370.1 bits), Expect = 2.6e-127, Sum P(3) = 2.6e-127
Identities = 227/492 (46%), Positives = 307/492 (62%)
Query: 140 CTNGLLENVEA-IDYQGESPDEQALVSAASAYGYTLFERTSGHIVIDINGEG-LRLDVLG 197
C E E + Y+ ESPDE ALV AA AY L +R + +++ G L ++L
Sbjct: 694 CPGDQREQQEGELRYEAESPDEAALVYAAKAYNCALVDRLHDQVSVELPHLGRLTFELLH 753
Query: 198 LHEFDSVRKRMSVVIRFP-DNSVKVLVKGADSSMFNIL---AKDSKRN---DLIRHITQS 250
FDS+RKRMSVVIR P + + V KGADS + ++L + D R IR TQ+
Sbjct: 754 TLGFDSIRKRMSVVIRHPLTDEINVYTKGADSVVMDLLLPCSSDDARGRHQKKIRSKTQN 813
Query: 251 HLSEYSSQGLRTLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLL 310
+L+ Y+ +GLRTL +A R L+ EE W + +A TS+ R L Q+A +E +L LL
Sbjct: 814 YLNLYAVEGLRTLCIAKRVLSKEEYACWLQSHIEAETSVESREELLFQSAVRLETNLHLL 873
Query: 311 GATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGN 370
GATGIED+LQDGVPE I LRQAG+++WVLTGDKQ+TAI+IA +CKLL + I +N +
Sbjct: 874 GATGIEDRLQDGVPETIAKLRQAGLQIWVLTGDKQETAINIAYACKLLDHGEEVITLNAD 933
Query: 371 SEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVA 430
S E C LL ++S NS+ S + S S P
Sbjct: 934 SREACAALLDQCLCYVQSRNSRSVPQNSESSFSVGFSFNPASTSTDSSPSP--------- 984
Query: 431 AIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDM 490
+L+IDG SL Y LEK LE LA CR VLCCR PLQK+ +V L++++ M
Sbjct: 985 -----SLVIDGRSLAYALEKSLEDKFLFLAKQCRSVLCCRSTPLQKSMVVKLVRNKLKAM 1039
Query: 491 TLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLVHGHWNYQRI 550
TLAIGDGANDVSMIQ+ADVGVGI GQEG QAVMASDFA+ +FR+L+RLL+VHGHW Y R+
Sbjct: 1040 TLAIGDGANDVSMIQVADVGVGISGQEGMQAVMASDFAVPRFRYLERLLIVHGHWCYSRL 1099
Query: 551 GYLVLYNFYRNAVFVLMLFWYILFTGFSTTSALTDWSSVFYSLLYTSVPTIVVGIVDKDL 610
+VLY FY+N +FV +LFW+ + GFS ++ + W +F++LL++S+P +V G++DKD+
Sbjct: 1100 ANMVLYFFYKNTMFVGLLFWFQFYCGFSASAMIDQWYLIFFNLLFSSLPQLVTGVLDKDV 1159
Query: 611 SHKTLMQYPKLY 622
L++ P+LY
Sbjct: 1160 PADMLLRKPQLY 1171
|
|
| ZFIN|ZDB-GENE-101102-1 atp10a "ATPase, class V, type 10A" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 1050 (374.7 bits), Expect = 1.5e-125, Sum P(2) = 1.5e-125
Identities = 222/502 (44%), Positives = 328/502 (65%)
Query: 130 PIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYTLFERTSGHIVIDINGE 189
P+P P+ + L ++ + ++ ESPDE ALV AA AY L R + +++
Sbjct: 665 PVP-PNFDK--SKALAQDECELRFEAESPDEAALVYAARAYKCALVGRLPDQVTVELPHL 721
Query: 190 G-LRLDVLGLHEFDSVRKRMSVVIRFP-DNSVKVLVKGADSSMFNIL--AKDS---KRND 242
G L ++L FDS RKRMSVV++ P + V KGADS + +++ A D KR
Sbjct: 722 GKLSFELLHTLGFDSTRKRMSVVVKHPLTEQITVYTKGADSVIMDLIRPATDDCKGKRQR 781
Query: 243 LIRHITQSHLSEYSSQGLRTLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAAL 302
I + TQ++L+ Y++ GLRTL +A + L+ EE W R+ +A T++ R L ++A
Sbjct: 782 KILYKTQNYLNLYAADGLRTLCIAKKVLSKEEYASWLQRHLEAETAIQRREELLFESALR 841
Query: 303 IECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDM 362
+E +L LLGATGIED+LQDGVPE I +LR+AG+++WVLTGDKQ+TAI+IA +CKLL P+
Sbjct: 842 LETNLQLLGATGIEDRLQDGVPETIASLRKAGLQIWVLTGDKQETAINIAYACKLLDPEE 901
Query: 363 QQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKF-SDVP 421
+ I +N +S+E C LL ++ Y +++ + C+ + A +Y I + S
Sbjct: 902 EIITLNADSQEACARLLENS-LHY-IQA--KFLCDPRAGPQAAGDYAGIHFSSPVCSPTS 957
Query: 422 QGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVD 481
GH + + L L+IDG +L Y L+K LE +A SCR VLCCR PLQK+ +V
Sbjct: 958 SGHSGPFL--VHRLGLVIDGRTLAYALDKSLEDKFLAVARSCRSVLCCRSTPLQKSMVVK 1015
Query: 482 LIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLV 541
L++++ MTLAIGDGANDVSMIQ+ADVGVGI GQEG QAVMASDFA+ +FR+L++LLLV
Sbjct: 1016 LVRNKLKVMTLAIGDGANDVSMIQVADVGVGISGQEGMQAVMASDFALPRFRYLQKLLLV 1075
Query: 542 HGHWNYQRIGYLVLYNFYRNAVFVLMLFWYILFTGFSTTSALTDWSSVFYSLLYTSVPTI 601
HGHW Y R+ ++LY FY+NA+FV ++FWY + GFS ++ + W +F++L++++ P +
Sbjct: 1076 HGHWCYSRLANMILYFFYKNAMFVALIFWYQFYCGFSGSAMVDQWYLIFFNLMFSAFPQL 1135
Query: 602 VVGIVDKDLSHKTLMQYPKLYV 623
+ G +DKD+S +TL + P+LY+
Sbjct: 1136 ITGTLDKDVSAETLQELPQLYM 1157
|
|
| UNIPROTKB|F1NER7 ATP10A "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 1025 (365.9 bits), Expect = 4.9e-123, Sum P(2) = 4.9e-123
Identities = 226/479 (47%), Positives = 306/479 (63%)
Query: 153 YQGESPDEQALVSAASAYGYTLFERTSGHIVIDINGEG-LRLDVLGLHEFDSVRKRMSVV 211
Y+ ESPDE ALV AA AY +L R S + +++ G L +VL FDS+RKRMSVV
Sbjct: 702 YEAESPDEAALVYAARAYNCSLVGRLSDQVSVELPHLGTLNFEVLHTLGFDSIRKRMSVV 761
Query: 212 IRFP-DNSVKVLVKGADSSMFNILAKDS------KRNDLIRHITQSHLSEYSSQGLRTLV 264
+R P + + V KGADS + ++L S K I+ TQ++L+ Y+ GLRTL
Sbjct: 762 VRHPLTDEINVYTKGADSVIMDLLLPCSSGDPRGKHQKKIQTKTQNYLNLYAVDGLRTLC 821
Query: 265 VASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVP 324
+A R L+ EE W + +A +S+ +R L Q+A IE +L LLGATGIED+LQDGVP
Sbjct: 822 IAKRVLSKEEYACWLKSHLEAESSIENREELLFQSALQIEKNLHLLGATGIEDRLQDGVP 881
Query: 325 EAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKA 384
E I +LR+AG+++WVLTGDKQ+TA++IA +CKLL D + I +N S E C LL
Sbjct: 882 ETIASLRKAGLQIWVLTGDKQETAVNIAYACKLLDHDEEIITLNAESPETCAVLLEQCLQ 941
Query: 385 RYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDV-PQGHDVKEVAAIASLALIIDGNS 443
K SN T I+ + F+ + P V ++SL L+IDG +
Sbjct: 942 CVESKFSNNT-----------IDEATGNMTVGFTPLYPPSSPV-----LSSLGLVIDGRT 985
Query: 444 LVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSM 503
L Y LE LE LA CR VLCCR PLQK+ +V L++ + MTLAIGDGANDVSM
Sbjct: 986 LAYALEPTLEDKFLALAKRCRSVLCCRSTPLQKSMVVKLVRDKLKAMTLAIGDGANDVSM 1045
Query: 504 IQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLVHGHWNYQRIGYLVLYNFYRNAV 563
IQ+ADVGVGI GQEG QAVMASDFA+ +FR L++LLLVHGHW Y R+ +VLY FY+NA+
Sbjct: 1046 IQVADVGVGISGQEGMQAVMASDFAIPRFRHLEKLLLVHGHWCYSRLANMVLYFFYKNAM 1105
Query: 564 FVLMLFWYILFTGFSTTSALTDWSSVFYSLLYTSVPTIVVGIVDKDLSHKTLMQYPKLY 622
FV +LFWY + GFS +S + W +F++LL++S+P ++ G++DKD+ + L+ P+LY
Sbjct: 1106 FVALLFWYQFYCGFSGSSMVDQWYLIFFNLLFSSLPQLITGVLDKDVPAEVLLSVPQLY 1164
|
|
| UNIPROTKB|J9PB95 ATP10A "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 515 (186.3 bits), Expect = 1.0e-122, Sum P(5) = 1.0e-122
Identities = 98/187 (52%), Positives = 135/187 (72%)
Query: 436 ALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIG 495
A ++D L Y+ K S +CR VLCCR PLQK+ +V L++S+ MTLAIG
Sbjct: 939 AALLD-QCLHYVKSKSPCSTPQKTEGNCRSVLCCRSTPLQKSMVVKLVRSKLKAMTLAIG 997
Query: 496 DGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLVHGHWNYQRIGYLVL 555
DGANDVSMIQ+ADVGVGI GQEG QAVMASDFA+ +FR+L+RLL+VHGHW Y R+ +VL
Sbjct: 998 DGANDVSMIQVADVGVGISGQEGMQAVMASDFAVPRFRYLERLLIVHGHWCYSRLANMVL 1057
Query: 556 YNFYRNAVFVLMLFWYILFTGFSTTSALTDWSSVFYSLLYTSVPTIVVGIVDKDLSHKTL 615
Y FY+N +FV +LFW+ + GFS ++ + W +F++LL++S+P +V G++DKD+ L
Sbjct: 1058 YFFYKNTMFVGLLFWFQFYCGFSASAMIDQWYLIFFNLLFSSLPQLVTGVLDKDVPADVL 1117
Query: 616 MQYPKLY 622
+ P+LY
Sbjct: 1118 LTAPQLY 1124
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 658 | |||
| PLN03190 | 1178 | PLN03190, PLN03190, aminophospholipid translocase; | 0.0 | |
| TIGR01652 | 1057 | TIGR01652, ATPase-Plipid, phospholipid-translocati | 0.0 | |
| COG0474 | 917 | COG0474, MgtA, Cation transport ATPase [Inorganic | 1e-59 | |
| COG0474 | 917 | COG0474, MgtA, Cation transport ATPase [Inorganic | 8e-34 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 5e-30 | |
| TIGR01657 | 1054 | TIGR01657, P-ATPase-V, P-type ATPase of unknown pu | 9e-30 | |
| TIGR01517 | 944 | TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- | 5e-19 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 6e-14 | |
| TIGR01522 | 884 | TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium- | 8e-14 | |
| PRK10517 | 902 | PRK10517, PRK10517, magnesium-transporting ATPase | 3e-13 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 8e-13 | |
| TIGR01524 | 867 | TIGR01524, ATPase-IIIB_Mg, magnesium-translocating | 7e-11 | |
| PRK15122 | 903 | PRK15122, PRK15122, magnesium-transporting ATPase; | 3e-10 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 1e-08 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 3e-08 | |
| pfam13246 | 91 | pfam13246, Hydrolase_like2, Putative hydrolase of | 1e-07 | |
| TIGR00099 | 256 | TIGR00099, Cof-subfamily, Cof subfamily of IIB sub | 7e-07 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 8e-07 | |
| TIGR01106 | 997 | TIGR01106, ATPase-IIC_X-K, sodium or proton efflux | 3e-06 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 1e-05 | |
| COG0561 | 264 | COG0561, Cof, Predicted hydrolases of the HAD supe | 2e-05 | |
| pfam00702 | 187 | pfam00702, Hydrolase, haloacid dehalogenase-like h | 4e-05 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 8e-05 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 9e-05 | |
| pfam08282 | 254 | pfam08282, Hydrolase_3, haloacid dehalogenase-like | 3e-04 | |
| TIGR00338 | 219 | TIGR00338, serB, phosphoserine phosphatase SerB | 6e-04 | |
| COG2216 | 681 | COG2216, KdpB, High-affinity K+ transport system, | 0.002 | |
| TIGR01484 | 204 | TIGR01484, HAD-SF-IIB, HAD-superfamily hydrolase, | 0.002 | |
| TIGR01497 | 675 | TIGR01497, kdpB, K+-transporting ATPase, B subunit | 0.004 |
| >gnl|CDD|215623 PLN03190, PLN03190, aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Score = 826 bits (2135), Expect = 0.0
Identities = 377/631 (59%), Positives = 455/631 (72%), Gaps = 39/631 (6%)
Query: 1 MELVRLGQSYFMIEDKHMYDSSSGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQ 60
MELVR+GQ+YFMI D MYD +S SRFQCR L+INEDLGQI+Y+FSDKTGTLTENKMEFQ
Sbjct: 413 MELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQ 472
Query: 61 RASVCGKNYGNSLLLAQQVSAAAV-----RRWKLKSEISVDSKLMELLSKDLVGDERIAA 115
AS+ G +Y + Q A + + K ++ VD +L+EL +E
Sbjct: 473 CASIWGVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHV 532
Query: 116 HEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYTLF 175
H+FFL LAACNT++PI S V+ +DYQGESPDEQALV AA+AYG+ L
Sbjct: 533 HDFFLALAACNTIVPIVVDDTSD-------PTVKLMDYQGESPDEQALVYAAAAYGFMLI 585
Query: 176 ERTSGHIVIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADSSMFNILA 235
ERTSGHIVIDI+GE R +VLGLHEFDS RKRMSV++ PD +VKV VKGAD+SMF+++
Sbjct: 586 ERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVILGCPDKTVKVFVKGADTSMFSVID 645
Query: 236 KDSKRNDLIRHITQSHLSEYSSQGLRTLVVASRDLADEELKQWQHRYEDASTSLVDRASK 295
+ N + T++HL YSS GLRTLVV R+L D E +QW +E AST+L+ RA+
Sbjct: 646 RSLNMN--VIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAAL 703
Query: 296 LRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSC 355
LR+ A+ +E +LT+LGA+ IEDKLQ GVPEAIE+LR AGIKVWVLTGDKQ+TAISI S
Sbjct: 704 LRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSS 763
Query: 356 KLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDA 415
KLLT M QIIIN NS+E C+ L DA V S T
Sbjct: 764 KLLTNKMTQIIINSNSKESCRKSLEDAL----VMSKKLTTV------------------- 800
Query: 416 KFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQ 475
S + Q AA +ALIIDG SLVY+L+ +LE LF LA+ C VVLCCRVAPLQ
Sbjct: 801 --SGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQ 858
Query: 476 KAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFL 535
KAGIV L+K+RT DMTLAIGDGANDVSMIQMADVGVGI GQEGRQAVMASDFAMGQFRFL
Sbjct: 859 KAGIVALVKNRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRFL 918
Query: 536 KRLLLVHGHWNYQRIGYLVLYNFYRNAVFVLMLFWYILFTGFSTTSALTDWSSVFYSLLY 595
LLLVHGHWNYQR+GY++LYNFYRNAVFVL+LFWY+LFT F+ T+A+ +WSSV YS++Y
Sbjct: 919 VPLLLVHGHWNYQRMGYMILYNFYRNAVFVLVLFWYVLFTCFTLTTAINEWSSVLYSVIY 978
Query: 596 TSVPTIVVGIVDKDLSHKTLMQYPKLYVVQQ 626
T++PTIVVGI+DKDLS +TL++YP+LY Q
Sbjct: 979 TALPTIVVGILDKDLSRRTLLKYPQLYGAGQ 1009
|
Length = 1178 |
| >gnl|CDD|233509 TIGR01652, ATPase-Plipid, phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Score = 719 bits (1859), Expect = 0.0
Identities = 277/638 (43%), Positives = 386/638 (60%), Gaps = 62/638 (9%)
Query: 1 MELVRLGQSYFMIEDKHMYDSSSGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQ 60
+ELV+ Q+YF+ D MY + + RT ++NE+LGQ+ YIFSDKTGTLT+N MEF+
Sbjct: 319 LELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFK 378
Query: 61 RASVCGKNYGNSLLLAQQVSAAAVRRWKLKSE----ISVDSKLMELLSKDLVGDERIA-- 114
+ S+ G +YG+ ++ R E + V+SK + LV +
Sbjct: 379 KCSIAGVSYGDGF---TEIKDGIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKP 435
Query: 115 ----AHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAY 170
+EFFL LA C+TV+P + E I YQ SPDE ALV AA
Sbjct: 436 NAKRINEFFLALALCHTVVPEFND-----------DGPEEITYQAASPDEAALVKAARDV 484
Query: 171 GYTLFERTSG--HIVIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADS 228
G+ FERT ++I+++GE ++L + EF+S RKRMSV++R PD +K+L KGAD+
Sbjct: 485 GFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGADT 544
Query: 229 SMFNILAKDSKRNDLIRHITQSHLSEYSSQGLRTLVVASRDLADEELKQWQHRYEDASTS 288
+F L+ + + T+ HL Y+S+GLRTL +A R+L++EE ++W Y +AST+
Sbjct: 545 VIFKRLSSGG---NQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTA 601
Query: 289 LVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTA 348
L DR KL A IE DL LLGAT IEDKLQ+GVPE IE LRQAGIK+WVLTGDK +TA
Sbjct: 602 LTDREEKLDVVAESIEKDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETA 661
Query: 349 ISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEY 408
I+I SC+LL+ +M+QI+I +S + + V+++ + S E
Sbjct: 662 INIGYSCRLLSRNMEQIVITSDSLDATRS----------VEAAIKFGLE---GTSEEFNN 708
Query: 409 LAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLC 468
L S + +AL+IDG SL Y L+++LE + LA C+ V+C
Sbjct: 709 LGDSGN--------------------VALVIDGKSLGYALDEELEKEFLQLALKCKAVIC 748
Query: 469 CRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFA 528
CRV+P QKA +V L+K T TLAIGDGANDVSMIQ ADVGVGI G+EG QAVMASDFA
Sbjct: 749 CRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGVGISGKEGMQAVMASDFA 808
Query: 529 MGQFRFLKRLLLVHGHWNYQRIGYLVLYNFYRNAVFVLMLFWYILFTGFSTTSALTDWSS 588
+GQFRFL +LLLVHG W+Y+RI ++LY FY+N +F ++ FWY + GFS + W
Sbjct: 809 IGQFRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQFWYSFYNGFSGQTLYEGWYM 868
Query: 589 VFYSLLYTSVPTIVVGIVDKDLSHKTLMQYPKLYVVQQ 626
V Y++ +T++P I +G+ D+D+S ++YP+LY Q
Sbjct: 869 VLYNVFFTALPVISLGVFDQDVSASLSLRYPQLYREGQ 906
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. Length = 1057 |
| >gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 215 bits (549), Expect = 1e-59
Identities = 107/371 (28%), Positives = 153/371 (41%), Gaps = 99/371 (26%)
Query: 29 CRTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCGKNYGNSLLLAQQVSAAAVRRWK 88
R+L+ E LG + I SDKTGTLT+NKM +
Sbjct: 336 VRSLNAIETLGSVDVICSDKTGTLTQNKMTVK---------------------------- 367
Query: 89 LKSEISVDSKLMELLSKDLVGDERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENV 148
+I ++ ++ KDL + F L A CN+V P +G
Sbjct: 368 ---KIYINGGGKDIDDKDLKDSPAL--LRFLLAAALCNSVTPEKNGWYQAG--------- 413
Query: 149 EAIDYQGESPDEQALVSAASAYGYTLFERTSGHIVIDINGEGLRLDVLGLHEFDSVRKRM 208
P E ALV A G++L D++G + +L FDS RKRM
Sbjct: 414 --------DPTEGALVEFAEKLGFSL----------DLSGLEVEYPILAEIPFDSERKRM 455
Query: 209 SVVIRFPDNSVKVLVKGADSSMFNILAKDSKRNDLIRHITQSHLS-------EYSSQGLR 261
SV+++ + + VKGA + K + +T+ L E +S+GLR
Sbjct: 456 SVIVKTDEGKYILFVKGAPEVILERC----KSIGELEPLTEEGLRTLEEAVKELASEGLR 511
Query: 262 TLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQD 321
L VA + L E IE DL LG TGIED ++
Sbjct: 512 VLAVAYKKLDRAEK---------------------DDEVDEIESDLVFLGLTGIEDPPRE 550
Query: 322 GVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGN-----SEEECK 376
V EAIE LR+AGIKVW++TGD +TAI+IA C + ++I+G S+EE
Sbjct: 551 DVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDGAELDALSDEELA 610
Query: 377 DLLADAK--AR 385
+L+ + AR
Sbjct: 611 ELVEELSVFAR 621
|
Length = 917 |
| >gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 137 bits (348), Expect = 8e-34
Identities = 56/190 (29%), Positives = 85/190 (44%), Gaps = 15/190 (7%)
Query: 433 ASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTL 492
A AL+IDG L + + +L +L V RV+P QKA IV+ ++ +
Sbjct: 590 AESALVIDGAEL----DALSDEELAELVEELSV--FARVSPEQKARIVEALQKS-GHVVA 642
Query: 493 AIGDGANDVSMIQMADVGVGICGQEGRQAVMASD--FAMGQFRFLKRLLLVHGHWNYQRI 550
GDG ND ++ ADVG+ + G EG A + + L +V G Y I
Sbjct: 643 MTGDGVNDAPALKAADVGIAM-GGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNI 701
Query: 551 GYLVLYNFYRNAVFVLMLFWYILFTGFSTTSALTDWSSVFYSLLYTSVPTIVVGIVDKDL 610
+LY +N VL L Y LF F LT ++ +LL S+P + +G+ D +
Sbjct: 702 KKFILYLLSKNVGEVLTLLIYSLFNLFF--LPLTPLQLLWINLLTDSLPALALGVEDPES 759
Query: 611 SHKTLMQYPK 620
+M+ P
Sbjct: 760 ---DVMKRPP 766
|
Length = 917 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 124 bits (313), Expect = 5e-30
Identities = 58/221 (26%), Positives = 79/221 (35%), Gaps = 58/221 (26%)
Query: 138 SGCTNGLLENVEAI-DYQGESPDEQALVSAASAYGYTLFERTSGHIVIDINGEGLRLDVL 196
G + V +Y P E+AL+ +A G +L
Sbjct: 265 GGKEDNSSSLVACDNNYLSGDPMEKALLKSAELVGKAD-------------KGNKEYKIL 311
Query: 197 GLHEFDSVRKRMSVVIRFPDNSVKVLVKGADSSMFNILAKDSKRNDLIRHITQSHLSEYS 256
+ F SV KRMSV++ PD S + VKGA + + E +
Sbjct: 312 DVFPFSSVLKRMSVIVETPDGSDLLFVKGAPEFILERCNN-----------YEEKYLELA 360
Query: 257 SQGLRTLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIE 316
QGLR L AS++L D DL LG E
Sbjct: 361 RQGLRVLAFASKELED---------------------------------DLEFLGLITFE 387
Query: 317 DKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKL 357
D L+ E IE L+ AGIKV ++TGD TA +IA +
Sbjct: 388 DPLRPDAKETIEELKAAGIKVVMITGDNVLTAKAIAKELGI 428
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Score = 125 bits (316), Expect = 9e-30
Identities = 112/493 (22%), Positives = 184/493 (37%), Gaps = 105/493 (21%)
Query: 39 GQIRYIFSDKTGTLTENKMEF---QRASVCGKNYGNSLLLAQQVSAAAVRRWKLKSEISV 95
G+I DKTGTLTE+ ++ Q S + + + + ++
Sbjct: 446 GKIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFLKIVTEDSSLKPSITHKA------LAT 499
Query: 96 DSKLMELLSKDLVGDERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQG 155
L +L K LVGD L EA +
Sbjct: 500 CHSLTKLEGK-LVGDP--------LDKKM-----------------------FEATGWTL 527
Query: 156 ESPDEQALVSAASAYGYTLFERTSGHIVIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFP 215
E DE A E TS V+ + L ++ +F S +RMSV++
Sbjct: 528 EEDDESA-------------EPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVIVSTN 574
Query: 216 DNSVKVL-VKGADSSMFNILAKDSKRNDLIRHITQSHLSEYSSQGLRTLVVASRDLADEE 274
D VKGA ++ ++ + ++ +D Q L Y+ +G R L +A ++L
Sbjct: 575 DERSPDAFVKGAPETIQSLCSPETVPSDY-----QEVLKSYTREGYRVLALAYKELPKLT 629
Query: 275 LKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAG 334
L++ Q DA +E +LT LG E+ L+ E I+ L++A
Sbjct: 630 LQKAQDLSRDA-----------------VESNLTFLGFIVFENPLKPDTKEVIKELKRAS 672
Query: 335 IKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRT 394
I+ ++TGD TA+ +A C ++ P I+ E
Sbjct: 673 IRTVMITGDNPLTAVHVARECGIVNPSNTLILAEAEPPE-------------------SG 713
Query: 395 KCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLES 454
K N I+ + ++ P G D E + L + G + +L+
Sbjct: 714 KPNQIKFEV--IDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAF-AVLQAHSPE 770
Query: 455 DLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGIC 514
L L + V R+AP QK +V+L++ + D GDGAND ++ ADVG+ +
Sbjct: 771 LLLRLLSHTTVF--ARMAPDQKETLVELLQ-KLDYTVGMCGDGANDCGALKQADVGISLS 827
Query: 515 GQEGRQAVMASDF 527
E A +A+ F
Sbjct: 828 EAE---ASVAAPF 837
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054 |
| >gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 91.4 bits (227), Expect = 5e-19
Identities = 52/177 (29%), Positives = 77/177 (43%), Gaps = 29/177 (16%)
Query: 192 RLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADSSMFNILAKDSKRNDLIRHI---- 247
V+ ++ F+S RK MSVV++ + KGA + K N I
Sbjct: 471 EEKVVKIYPFNSERKFMSVVVKHSGGKYREFRKGASEIVLKPCRKRLDSNGEATPISDDD 530
Query: 248 ---TQSHLSEYSSQGLRTLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIE 304
+ +S LRT+ +A RD A EE +
Sbjct: 531 KDRCADVIEPLASDALRTICLAYRDFAPEEFPRKD----------------------YPN 568
Query: 305 CDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPD 361
LTL+G GI+D L+ GV EA++ ++AGI V ++TGD DTA +IA +C +LT
Sbjct: 569 KGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFG 625
|
This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 74.7 bits (184), Expect = 6e-14
Identities = 27/101 (26%), Positives = 43/101 (42%), Gaps = 13/101 (12%)
Query: 12 MIEDKHMYDSSSGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCGKNYGN 71
+ D + R L+ E+LG++ Y+ SDKTGTLT+NKM Q + G N
Sbjct: 215 AVGDARLAKKG----ILVRNLNALEELGKVDYLCSDKTGTLTKNKMTLQGVYIDGGKEDN 270
Query: 72 SLLLA-----QQVS----AAAVRRWKLKSEISVDSKLMELL 103
S L A ++ +L + +K ++L
Sbjct: 271 SSSLVACDNNYLSGDPMEKALLKSAELVGKADKGNKEYKIL 311
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 74.9 bits (184), Expect = 8e-14
Identities = 81/345 (23%), Positives = 118/345 (34%), Gaps = 93/345 (26%)
Query: 30 RTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCGKNYGNSLLLAQQVSAAAVRRWKL 89
R L E LG + I SDKTGTLT+N M + L ++A
Sbjct: 313 RKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDG-------LHTMLNA-------- 357
Query: 90 KSEISVDSKLMELLSKDLVGDERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVE 149
+S++ ++ D++ A L C N N E
Sbjct: 358 ---VSLNQFGEVIVDGDVLHGFYTVAVSRILEAGNL--------------CNNAKFRN-E 399
Query: 150 AIDYQGESPDEQALVSAASAYGYTLFERTSGHIVIDINGEGLRLDVLGLHE--FDSVRKR 207
A G +P + AL+ +G + LR + + E F S RK
Sbjct: 400 ADTLLG-NPTDVALIELLMKFGL----------------DDLRETYIRVAEVPFSSERKW 442
Query: 208 MSVVIRFP-DNSVKVLVKGAD----SSMFNILAKDSKR---NDLIRHITQSHLSEYSSQG 259
M+V D S +KGA KD K R + Q +E +S G
Sbjct: 443 MAVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAEMASAG 502
Query: 260 LRTLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKL 319
LR + AS + LT LG GI D
Sbjct: 503 LRVIAFASGPEKGQ---------------------------------LTFLGLVGINDPP 529
Query: 320 QDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQ 364
+ GV EA+ L G+++ ++TGD Q+TA+SIA + + Q
Sbjct: 530 RPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKTSQS 574
|
This model describes the P-type ATPase responsible for translocating calcium ions across the golgi membrane of fungi and animals , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. Length = 884 |
| >gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Score = 73.2 bits (180), Expect = 3e-13
Identities = 49/198 (24%), Positives = 79/198 (39%), Gaps = 39/198 (19%)
Query: 201 FDSVRKRMSVVIRFPDNSVKVLVKGADSSMFN----------ILAKDSKRNDLIRHITQS 250
FD R+RMSVV+ +++ KGA + N I+ D I+ +T
Sbjct: 449 FDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHNGEIVPLDDIMLRRIKRVTD- 507
Query: 251 HLSEYSSQGLRTLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLL 310
+ QGLR + VA++ L E D E DL L
Sbjct: 508 ---TLNRQGLRVVAVATKYLPARE----------GDYQRAD------------ESDLILE 542
Query: 311 GATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGN 370
G D ++ A++AL+ +G+ V +LTGD + A + C + D +++I +
Sbjct: 543 GYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKV---CHEVGLDAGEVLIGSD 599
Query: 371 SEEECKDLLADAKARYGV 388
E D LA+ R +
Sbjct: 600 IETLSDDELANLAERTTL 617
|
Length = 902 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 71.4 bits (175), Expect = 8e-13
Identities = 54/170 (31%), Positives = 79/170 (46%), Gaps = 24/170 (14%)
Query: 200 EFDSVRKRMSVVIRFPDNSVKVLVKGADSSMFN----ILAKDSKRNDLIRHITQSHLS-- 253
EF RK MSV+ + P K+ VKGA + IL D + L + + LS
Sbjct: 427 EFSRDRKSMSVLCK-PSTGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKNTILSVI 485
Query: 254 -EYSS-QGLRTLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLG 311
E + + LR L +A +D+ D L D A+ IE DLT +G
Sbjct: 486 KEMGTTKALRCLALAFKDIPDPR----------EEDLLSDPAN-----FEAIESDLTFIG 530
Query: 312 ATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPD 361
G+ D + V +AIE R AGI+V ++TGD ++TA +I + +PD
Sbjct: 531 VVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPD 580
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 65.3 bits (159), Expect = 7e-11
Identities = 49/195 (25%), Positives = 80/195 (41%), Gaps = 33/195 (16%)
Query: 201 FDSVRKRMSVVIRFPDNSVKVLVKGADSSMFNILAKDSKRNDLIRHITQSHLS------- 253
FD R+R+SVV+ +++ KGA M + + + +++S S
Sbjct: 414 FDFDRRRLSVVVENRAEVTRLICKGAVEEMLTV-CTHKRFGGAVVTLSESEKSELQDMTA 472
Query: 254 EYSSQGLRTLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGAT 313
E + QG+R + VA++ L E A + D E L + G
Sbjct: 473 EMNRQGIRVIAVATKTLKVGE----------ADFTKTD------------EEQLIIEGFL 510
Query: 314 GIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEE 373
G D ++ EAI AL + GI V VLTGD + I C+ + D ++ + EE
Sbjct: 511 GFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARI---CQEVGIDANDFLLGADIEE 567
Query: 374 ECKDLLADAKARYGV 388
+ LA +Y +
Sbjct: 568 LSDEELARELRKYHI 582
|
This model describes the magnesium translocating P-type ATPase found in a limited number of bacterial species and best described in Salmonella typhimurium, which contains two isoforms. These transporters are active in low external Mg2+ concentrations and pump the ion into the cytoplasm. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis [Transport and binding proteins, Cations and iron carrying compounds]. Length = 867 |
| >gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 63.1 bits (154), Expect = 3e-10
Identities = 41/153 (26%), Positives = 64/153 (41%), Gaps = 34/153 (22%)
Query: 201 FDSVRKRMSVVIRFPDNSVKVLVKGADSSMFNI----------LAKDSKRNDLIRHITQS 250
FD VR+R+SVV+ ++ KGA M + D R + + + +
Sbjct: 447 FDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRDGDTVRPLDEARRERLLALAE- 505
Query: 251 HLSEYSSQGLRTLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLL 310
Y++ G R L+VA+R++ E + Q+ D E DL +
Sbjct: 506 ---AYNADGFRVLLVATREIPGGESRA-QYSTAD-------------------ERDLVIR 542
Query: 311 GATGIEDKLQDGVPEAIEALRQAGIKVWVLTGD 343
G D ++ AI ALR+ G+ V VLTGD
Sbjct: 543 GFLTFLDPPKESAAPAIAALRENGVAVKVLTGD 575
|
Length = 903 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 58.1 bits (140), Expect = 1e-08
Identities = 60/204 (29%), Positives = 90/204 (44%), Gaps = 39/204 (19%)
Query: 201 FDSVRKRMSVVIRFPDN---SVKVLVKGA--------DSSMFNILAKDSKRNDLIRHITQ 249
FDS KRM+ + + DN + + KGA SS K S D R +
Sbjct: 533 FDSEIKRMASI--YEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELII 590
Query: 250 SHLSEYSSQGLRTLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTL 309
+++ +++GLR L AS+ + Q + E + R TA E DL
Sbjct: 591 ANMESLAAEGLRVLAFASKSFDKADNNDDQLKNETLN----------RATA---ESDLEF 637
Query: 310 LGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPD-------- 361
LG GI D ++ A+E QAGI V +LTGD +TA +IA ++ P+
Sbjct: 638 LGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEI 697
Query: 362 MQQIIINGN-----SEEECKDLLA 380
M +++ G+ S+EE DL A
Sbjct: 698 MDSMVMTGSQFDALSDEEVDDLKA 721
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 56.5 bits (137), Expect = 3e-08
Identities = 30/114 (26%), Positives = 46/114 (40%), Gaps = 11/114 (9%)
Query: 245 RHITQSHLSEYSSQGLRTLV------VASRDLADEELKQWQHRYEDASTSLVDRASKLRQ 298
E +G+ V V + L EE + ++ +
Sbjct: 463 GLPDVEDFEEIPGRGVEAEVDGERVLVGNARLLGEE-----GIDLPLLSERIEALESEGK 517
Query: 299 TAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIA 352
T + D L+G + D+L+ EAI AL+ GIKV +LTGD + TA +IA
Sbjct: 518 TVVFVAVDGKLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIA 571
|
Length = 713 |
| >gnl|CDD|222006 pfam13246, Hydrolase_like2, Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Score = 49.5 bits (119), Expect = 1e-07
Identities = 28/112 (25%), Positives = 38/112 (33%), Gaps = 28/112 (25%)
Query: 123 AACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYTLFE-RTSGH 181
A CN ++ G G P E AL+ A G + E R
Sbjct: 1 ALCNDAKFGENEEKNGGEIIG-------------DPTESALLVFAEKLGIDVEELRARYP 47
Query: 182 IVIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVK-VLVKGADSSMFN 232
V +I F+S RKRMS V + D+ + VKGA +
Sbjct: 48 RVAEI-------------PFNSERKRMSTVHKLEDDDGYRLFVKGAPERILE 86
|
This is a putative hydrolase of the sodium-potassium ATPase alpha subunit. Length = 91 |
| >gnl|CDD|232824 TIGR00099, Cof-subfamily, Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Score = 50.7 bits (122), Expect = 7e-07
Identities = 50/235 (21%), Positives = 73/235 (31%), Gaps = 33/235 (14%)
Query: 302 LIECDL--TLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLT 359
LI DL TLL + EA+ LR+ GIKV + TG +I K L
Sbjct: 1 LIFIDLDGTLLNDD---HTISPSTKEALAKLREKGIKVVLATGRPYKEVKNIL---KELG 54
Query: 360 PDMQQIIING------NSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYL-AIS 412
D I NG E K L + + + L I
Sbjct: 55 LDTPFITANGAAVIDDQGEILYKKPLDLDLVEEILNFLKKHGLDVILYGDDSIYASKNDP 114
Query: 413 NDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYIL----EKDLESDLFDLATSCRVVLC 468
G EV I L D ++ + + DL + + V
Sbjct: 115 EYFTIFKKFLGEPKLEVVDI--QYLPDDILKILLLFLDPEDLDLLIEALNKLELEENVSV 172
Query: 469 CRVAP---------LQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGV 511
P + K + + + + +A GDG ND+ M++ A GV
Sbjct: 173 VSSGPYSIEITAKGVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGV 227
|
This subfamily of sequences falls within the Class-IIB subfamily (TIGR01484) of the Haloacid Dehalogenase superfamily of aspartate-nucleophile hydrolases. The use of the name "Cof" as an identifier here is arbitrary and refers to the E. coli Cof protein. This subfamily is notable for the large number of recent paralogs in many species. Listeria, for instance, has 12, Clostridium, Lactococcus and Streptococcus pneumoniae have 8 each, Enterococcus and Salmonella have 7 each, and Bacillus subtilus, Mycoplasma, Staphylococcus and E. coli have 6 each. This high degree of gene duplication is limited to the gamma proteobacteria and low-GC gram positive lineages. The profusion of genes in this subfamily is not coupled with a high degree of divergence, so it is impossible to determine an accurate phylogeny at the equivalog level. Considering the relationship of this subfamily to the other known members of the HAD-IIB subfamily (TIGR01484), sucrose and trehalose phosphatases and phosphomannomutase, it seems a reasonable hypothesis that these enzymes act on phosphorylated sugars. Possibly the diversification of genes in this subfamily represents the diverse sugars and polysaccharides that various bacteria find in their biological niches. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences [Unknown function, Enzymes of unknown specificity]. Length = 256 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 51.9 bits (125), Expect = 8e-07
Identities = 25/124 (20%), Positives = 47/124 (37%), Gaps = 8/124 (6%)
Query: 460 ATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGR 519
A + + RV+P QK IV+ ++ + GDG ND ++ ADVG+ + +
Sbjct: 423 AKELGIDVFARVSPEQKLQIVEALQKKGHI-VAMTGDGVNDAPALKKADVGIAMGAKA-- 479
Query: 520 QAVMASDFAMGQFRFLKRLLLV-HGHWNYQRIGYLVLYNFYRNAVFVLMLFWYILFTGFS 578
A+D + + V G + I + + N + + + I+
Sbjct: 480 ----AADIVLLDDDLSAIVKAVKEGRKIFSNIKSNIFWAIAYNLILIPLALLLIVIILLL 535
Query: 579 TTSA 582
A
Sbjct: 536 PMLA 539
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Score = 50.2 bits (120), Expect = 3e-06
Identities = 62/220 (28%), Positives = 88/220 (40%), Gaps = 62/220 (28%)
Query: 307 LTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQII 366
L +G + D + VP+A+ R AGIKV ++TGD TA +IA II
Sbjct: 557 LCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVG--------II 608
Query: 367 INGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDV 426
GN E D AR + S + N + DAK
Sbjct: 609 SEGNETVE------DIAARLNIPVS---QVNPR--------------DAK---------- 635
Query: 427 KEVAAIASLALIIDGNSLVYILEKDLESDLFD--LATSCRVVLCCRVAPLQKAGIVDLIK 484
A ++ G+ L KD+ S+ D L +V R +P QK IV+ +
Sbjct: 636 ---------ACVVHGSDL-----KDMTSEQLDEILKYHTEIVF-ARTSPQQKLIIVEGCQ 680
Query: 485 SRTDDMTLAIGDGANDVSMIQMADVGV--GICGQE-GRQA 521
R + GDG ND ++ AD+GV GI G + +QA
Sbjct: 681 -RQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQA 719
|
This model describes the P-type ATPases responsible for the exchange of either protons or sodium ions for potassium ions across the plasma membranes of eukaryotes. Unlike most other P-type ATPases, members of this subfamily require a beta subunit for activity. This model encompasses eukaryotes and consists of two functional types, a Na/K antiporter found widely distributed in eukaryotes and a H/K antiporter found only in vertebrates. The Na+ or H+/K+ antiporter P-type ATPases have been characterized as Type IIC based on a published phylogenetic analysis. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps [Energy metabolism, ATP-proton motive force interconversion]. Length = 997 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 48.0 bits (115), Expect = 1e-05
Identities = 29/112 (25%), Positives = 51/112 (45%), Gaps = 3/112 (2%)
Query: 244 IRHITQSHLSEYSSQGLRTLVVASRD--LADEELKQWQHRYEDASTSLVDRASKLRQTAA 301
+ Q + E +G+ V + + + + AS L++ +T
Sbjct: 308 LELPKQEDVEEVPGKGVEATVDGGEEVRIGNPRFLELAIEPISASPDLLNEGESQGKTVV 367
Query: 302 LIECDLTLLGATGIEDKLQDGVPEAIEALRQAG-IKVWVLTGDKQDTAISIA 352
+ D LLG + D+L+ EAI AL++AG IK+ +LTGD + A ++A
Sbjct: 368 FVAVDGELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVA 419
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|223635 COG0561, Cof, Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Score = 46.6 bits (111), Expect = 2e-05
Identities = 47/248 (18%), Positives = 81/248 (32%), Gaps = 62/248 (25%)
Query: 302 LIECDL--TLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLT 359
L+ DL TLL + + EA+ LR+ G+KV + TG +SI + L
Sbjct: 5 LLAFDLDGTLLDSNK---TISPETKEALARLREKGVKVVLATGRPLPDVLSIL---EEL- 57
Query: 360 PDMQQIIINGN----------------SEEECKDLLADAKARYGVKSSNRTKCN----SK 399
+ +I N S E+ ++LL + G+ T K
Sbjct: 58 -GLDGPLITFNGALIYNGGELLFQKPLSREDVEELLELLEDFQGIALVLYTDDGIYLTKK 116
Query: 400 LKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDL 459
AE + + + D K +A ++ LV L K +
Sbjct: 117 RGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEIL---EELVEALRKRFPDLGLTV 173
Query: 460 ATSCRVVLCCRVAPLQKAGIVDLIKSRTD----------------DMTLAIGDGANDVSM 503
++S +D+ + +A GD ND+ M
Sbjct: 174 SSS-------------GPISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEM 220
Query: 504 IQMADVGV 511
+++A +GV
Sbjct: 221 LEVAGLGV 228
|
Length = 264 |
| >gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 44.6 bits (105), Expect = 4e-05
Identities = 35/140 (25%), Positives = 63/140 (45%), Gaps = 9/140 (6%)
Query: 259 GLRTLVVASRDLADEELKQWQHRY--EDASTSLVDRASKLRQTAALIECDLTLLGATGIE 316
G+ ++ A +L E ++ R + + + DL +LG +
Sbjct: 33 GVAIVIAAGENLTKEGREELVRRLLLRALAGEELLEELLRAGATVVAVLDLVVLGLIALT 92
Query: 317 DKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIA----LSCKLLTPDMQQIIINGNSE 372
D L G EA++ L++AGIK+ +LTGD + TA +IA L L++ D+ ++ G +
Sbjct: 93 DPLYPGAREALKELKEAGIKLAILTGDNRLTANAIARLLGLFDALVSADLYGLVGVGKPD 152
Query: 373 EECKDLLADAKARYGVKSSN 392
+ +L + GVK
Sbjct: 153 PKIFELALE---ELGVKPEE 169
|
This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 45.3 bits (108), Expect = 8e-05
Identities = 19/54 (35%), Positives = 33/54 (61%)
Query: 299 TAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIA 352
T+ L+ + L G + D+L+ E I+AL++ GI+ +LTGD + TA ++A
Sbjct: 395 TSVLVAVNGELAGVLALADQLKPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVA 448
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 45.4 bits (108), Expect = 9e-05
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 285 ASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGI-KVWVLTGD 343
++ R +T + D T LG + D+ + EAI L+ GI KV +LTGD
Sbjct: 329 LEAAVGARPESAGKTIVHVARDGTYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGD 388
Query: 344 KQDTAISIA 352
++ A +A
Sbjct: 389 RRAVAERVA 397
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|219777 pfam08282, Hydrolase_3, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 42.6 bits (101), Expect = 3e-04
Identities = 50/231 (21%), Positives = 91/231 (39%), Gaps = 32/231 (13%)
Query: 305 CDL--TLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTP-- 360
DL TLL + K+ + EAI+ L++ GIKV + TG A+ + L P
Sbjct: 3 SDLDGTLLNSDK---KISERTKEAIKKLQEKGIKVVIATGRPYRGALPVLEELGLDLPVI 59
Query: 361 ----------DMQQIIINGNSEEECKDLLADAKARYG---VKSSNRTKCNSKLKRSAEIE 407
+ + + N S+E+ K+++ K + + + + + E
Sbjct: 60 CYNGAYIYDENGKILYKNPISKEDVKEIIEYLKENNLSILLYTDDGAYILNDVSEKIVRE 119
Query: 408 YLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILE--KDLESDLFDLATSCRV 465
F V ++ E I + ++ D L + + K+L L + +S
Sbjct: 120 E---RYVKSFVLVIDDFELLEDEDINKILIVTDPEDLDELEKELKELFGSLITITSSGPG 176
Query: 466 VLCCRVAPL--QKA-GIVDLIK--SRTDDMTLAIGDGANDVSMIQMADVGV 511
L + P K + L K + +A GDG ND+ M+++A +GV
Sbjct: 177 YL--EIMPKGVSKGTALKALAKHLGIDLEEVIAFGDGENDIEMLELAGLGV 225
|
This family contains haloacid dehalogenase-like hydrolase enzymes. Length = 254 |
| >gnl|CDD|232927 TIGR00338, serB, phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Score = 41.6 bits (98), Expect = 6e-04
Identities = 14/32 (43%), Positives = 21/32 (65%)
Query: 491 TLAIGDGANDVSMIQMADVGVGICGQEGRQAV 522
T+A+GDGAND+SMI+ A +G+ + Q
Sbjct: 171 TVAVGDGANDLSMIKAAGLGIAFNAKPKLQQK 202
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins [Amino acid biosynthesis, Serine family]. Length = 219 |
| >gnl|CDD|225126 COG2216, KdpB, High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 41.1 bits (97), Expect = 0.002
Identities = 22/65 (33%), Positives = 37/65 (56%)
Query: 288 SLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDT 347
+ VD S+L T ++ + +LG ++D ++ G+ E LR+ GIK ++TGD T
Sbjct: 417 AAVDEVSRLGGTPLVVVENGRILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLT 476
Query: 348 AISIA 352
A +IA
Sbjct: 477 AAAIA 481
|
Length = 681 |
| >gnl|CDD|233434 TIGR01484, HAD-SF-IIB, HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Score = 39.7 bits (93), Expect = 0.002
Identities = 43/231 (18%), Positives = 72/231 (31%), Gaps = 56/231 (24%)
Query: 306 DLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQI 365
D TLL E L EA+E LR+AG+KV ++TG K L +
Sbjct: 7 DGTLLDPNAHE--LSPETIEALERLREAGVKVVLVTGRSL-------AEIKELLKQLPLP 57
Query: 366 IINGN-------SEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFS 418
+I N E + + G+K E ++S +
Sbjct: 58 LIAENGALIFYPGEILYIEPSDVFEEILGIK------------EEIGAELKSLSEHYVGT 105
Query: 419 DVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAG 478
+ K +A L ++L+S + + A
Sbjct: 106 ----FIEDKAIAVAIHYVG--------AELGQELDSKMRERLEKIGRNDLELEAIYVGKT 153
Query: 479 IVDLIKSRTD----------------DMTLAIGDGANDVSMIQMADVGVGI 513
++++ + D D LA GD ND M ++A + V +
Sbjct: 154 DLEVLPAGVDKGSALQALLKELNGKRDEILAFGDSGNDEEMFEVAGLAVAV 204
|
This subfamily falls within the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The Class II subfamilies are characterized by a domain that is located between the second and third conserved catalytic motifs of the superfamily domain. The IIB subfamily is distinguished from the IIA subfamily (TIGR01460) by homology and the predicted secondary structure of this domain by PSI-PRED. The IIB subfamily's Class II domain has the following predicted structure: Helix-Sheet-Sheet-(Helix or Sheet)-Helix-Sheet-(variable)-Helix-Sheet-Sheet. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing OMNI|TC0379 and OMNI|SA2196 whose relationship to the other groups is unclear [Unknown function, Enzymes of unknown specificity]. Length = 204 |
| >gnl|CDD|130561 TIGR01497, kdpB, K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Score = 39.9 bits (93), Expect = 0.004
Identities = 20/63 (31%), Positives = 36/63 (57%)
Query: 290 VDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAI 349
VD+ ++ T ++ D + G ++D ++ G+ E LR+ GIK ++TGD + TA
Sbjct: 418 VDQVARQGGTPLVVCEDNRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAA 477
Query: 350 SIA 352
+IA
Sbjct: 478 AIA 480
|
This model describes the P-type ATPase subunit of the complex responsible for translocating potassium ions across biological membranes in microbes. In E. coli and other species, this complex consists of the proteins KdpA, KdpB, KdpC and KdpF. KdpB is the ATPase subunit, while KdpA is the potassium-ion translocating subunit. The function of KdpC is unclear, although cit has been suggested to couple the ATPase subunit to the ion-translocating subunit , while KdpF serves to stabilize the complex. The potassium P-type ATPases have been characterized as Type IA based on a phylogenetic analysis which places this clade closest to the heavy-metal translocating ATPases (Type IB). Others place this clade closer to the Na+/K+ antiporter type (Type IIC) based on physical characteristics. This model is very clear-cut, with a strong break between trusted hits and noise. All members of the seed alignment, from Clostridium, Anabaena and E. coli are in the characterized table. One sequence above trusted, OMNI|NTL01TA01282, is apparently mis-annotated in the primary literature, but properly annotated by TIGR [Transport and binding proteins, Cations and iron carrying compounds]. Length = 675 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 658 | |||
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 100.0 | |
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 100.0 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 100.0 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 100.0 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 100.0 | |
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 100.0 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 100.0 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 100.0 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 100.0 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 100.0 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 100.0 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 100.0 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 100.0 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 100.0 | |
| KOG0203 | 1019 | consensus Na+/K+ ATPase, alpha subunit [Inorganic | 100.0 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 100.0 | |
| KOG0208 | 1140 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 100.0 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 100.0 | |
| KOG0209 | 1160 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| KOG0205 | 942 | consensus Plasma membrane H+-transporting ATPase [ | 100.0 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 100.0 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 100.0 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 100.0 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 100.0 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 99.98 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 99.96 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 99.92 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 99.91 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 99.9 | |
| PLN02887 | 580 | hydrolase family protein | 99.89 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 99.89 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 99.88 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 99.86 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 99.86 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.83 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.83 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 99.83 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 99.81 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 99.8 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 99.77 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.76 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 99.72 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 99.72 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 99.71 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 99.69 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 99.67 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 99.67 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 99.64 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.61 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 99.57 | |
| PLN02423 | 245 | phosphomannomutase | 99.57 | |
| PF13246 | 91 | Hydrolase_like2: Putative hydrolase of sodium-pota | 99.56 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 99.51 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 99.42 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 99.29 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 99.26 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 99.25 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 99.24 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 99.13 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 99.11 | |
| PLN02580 | 384 | trehalose-phosphatase | 99.08 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 99.05 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 99.03 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 99.01 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 98.95 | |
| PLN03017 | 366 | trehalose-phosphatase | 98.91 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 98.75 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 98.75 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 98.69 | |
| PLN02151 | 354 | trehalose-phosphatase | 98.62 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 98.61 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 98.58 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 98.52 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 98.5 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 98.24 | |
| PF02358 | 235 | Trehalose_PPase: Trehalose-phosphatase; InterPro: | 98.22 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 98.21 | |
| PLN02954 | 224 | phosphoserine phosphatase | 98.13 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 98.12 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 98.12 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 98.06 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 98.04 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 98.0 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 97.94 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 97.92 | |
| COG1877 | 266 | OtsB Trehalose-6-phosphatase [Carbohydrate transpo | 97.92 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 97.86 | |
| PRK08238 | 479 | hypothetical protein; Validated | 97.86 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 97.85 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 97.72 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 97.71 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 97.7 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 97.69 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 97.68 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 97.67 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 97.67 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 97.6 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 97.6 | |
| PRK06769 | 173 | hypothetical protein; Validated | 97.56 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 97.54 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 97.5 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 97.48 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 97.43 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 97.42 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 97.41 | |
| PLN03063 | 797 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 97.4 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 97.4 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 97.36 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 97.35 | |
| TIGR01689 | 126 | EcbF-BcbF capsule biosynthesis phosphatase. Due to | 97.31 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 97.31 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 97.29 | |
| PLN03064 | 934 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 97.19 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 97.18 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 97.15 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 97.13 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 97.08 | |
| PHA03398 | 303 | viral phosphatase superfamily protein; Provisional | 97.06 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 97.02 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 97.01 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 97.01 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 97.01 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 96.97 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 96.93 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 96.9 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 96.86 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 96.85 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 96.83 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 96.81 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 96.79 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 96.75 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 96.71 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 96.69 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 96.63 | |
| TIGR02468 | 1050 | sucrsPsyn_pln sucrose phosphate synthase/possible | 96.63 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 96.6 | |
| KOG4383 | 1354 | consensus Uncharacterized conserved protein [Funct | 96.55 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 96.51 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 96.46 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 96.37 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 96.36 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 96.33 | |
| PLN02940 | 382 | riboflavin kinase | 96.25 | |
| PF03332 | 220 | PMM: Eukaryotic phosphomannomutase; InterPro: IPR0 | 96.11 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 96.11 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 96.07 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 96.07 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 96.05 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 96.04 | |
| PLN02177 | 497 | glycerol-3-phosphate acyltransferase | 96.03 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 95.9 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 95.84 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 95.63 | |
| COG0241 | 181 | HisB Histidinol phosphatase and related phosphatas | 95.57 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 95.55 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 95.34 | |
| PLN02811 | 220 | hydrolase | 95.29 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 95.19 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 95.18 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 95.11 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 94.88 | |
| TIGR01663 | 526 | PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | 94.73 | |
| TIGR01460 | 236 | HAD-SF-IIA Haloacid Dehalogenase Superfamily Class | 94.54 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 93.3 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 92.99 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 92.81 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 92.56 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 92.29 | |
| TIGR02251 | 162 | HIF-SF_euk Dullard-like phosphatase domain. This d | 92.04 | |
| KOG3189 | 252 | consensus Phosphomannomutase [Lipid transport and | 91.61 | |
| COG0647 | 269 | NagD Predicted sugar phosphatases of the HAD super | 91.48 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 91.3 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 90.52 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 90.19 | |
| PTZ00445 | 219 | p36-lilke protein; Provisional | 89.89 | |
| TIGR01680 | 275 | Veg_Stor_Prot vegetative storage protein. The prot | 89.61 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 88.09 | |
| PF08645 | 159 | PNK3P: Polynucleotide kinase 3 phosphatase; InterP | 87.88 | |
| COG0637 | 221 | Predicted phosphatase/phosphohexomutase [General f | 87.78 | |
| PF00689 | 182 | Cation_ATPase_C: Cation transporting ATPase, C-ter | 85.77 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 85.48 | |
| TIGR01456 | 321 | CECR5 HAD-superfamily class IIA hydrolase, TIGR014 | 83.57 | |
| PF06437 | 408 | ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR0 | 81.34 | |
| COG3700 | 237 | AphA Acid phosphatase (class B) [General function | 81.26 |
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-100 Score=879.94 Aligned_cols=614 Identities=61% Similarity=0.966 Sum_probs=506.4
Q ss_pred CeEEeeeeeehhccccccccCCCCCeeeeccCCcccccccceEEEeccCcccccceEEEEEEEEcCcccCCchhhHHHHH
Q 041225 1 MELVRLGQSYFMIEDKHMYDSSSGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCGKNYGNSLLLAQQVS 80 (658)
Q Consensus 1 ~e~~~~~~~~~~~~d~~~~~~~~~~~i~vr~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~ 80 (658)
+|++|++|++||+||++||++..+.++.||+++++|+||+|++||||||||||+|+|.|++|+++|..|+......+...
T Consensus 413 leivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT~N~M~fk~~~i~g~~y~~~~~~~~~~~ 492 (1178)
T PLN03190 413 MELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIWGVDYSDGRTPTQNDH 492 (1178)
T ss_pred HHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCccccceEEEEEEEECCEEcccccccchhhh
Confidence 58999999999999999999999999999999999999999999999999999999999999999998874321110000
Q ss_pred -H----HHHhhhccccccccChHHHHHHhhccCcchhHHHHHHHHHHhhccceeecCCCCCCCCCCCCcccCCcceeeec
Q 041225 81 -A----AAVRRWKLKSEISVDSKLMELLSKDLVGDERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQG 155 (658)
Q Consensus 81 -~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (658)
. .......+......++.+.+........+......+|++++++||++.+...+...+ ...+.++|+|
T Consensus 493 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~~~~~~-------~~~~~~~Y~a 565 (1178)
T PLN03190 493 AGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIVVDDTSD-------PTVKLMDYQG 565 (1178)
T ss_pred hccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcCCceeeccCCCCC-------ccccceEEec
Confidence 0 000111122222334444443322212223345788999999999998853211000 0012467999
Q ss_pred CChhHHHHHHHHHHcCcEEEEEcCCeEEEEeCCcEEEEEEEEeeCCCCCCCeeEEEEEcCCCcEEEEEeCCchHhHHhhh
Q 041225 156 ESPDEQALVSAASAYGYTLFERTSGHIVIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADSSMFNILA 235 (658)
Q Consensus 156 ~~p~e~al~~~a~~~g~~~~~~~~~~~~~~~~g~~~~~~il~~~~F~s~rk~msviv~~~~~~~~l~~KGa~e~i~~~~~ 235 (658)
+||+|.||+++|+.+|+.+..|+++.+.+++.|...+|++++++||+|+|||||||++++++.+.+|+||||+.|+++|+
T Consensus 566 ~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~pF~S~rKrMSvIv~~~~~~~~l~~KGA~e~il~~~~ 645 (1178)
T PLN03190 566 ESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVILGCPDKTVKVFVKGADTSMFSVID 645 (1178)
T ss_pred CCCcHHHHHHHHHHCCCeEecccCCeEEEeeccceecceeEEEecccccccEEEEEEEcCCCcEEEEEecCcHHHHHhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cCccccHHHHHHHHHHHHHHhhcCCeEEEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeecccc
Q 041225 236 KDSKRNDLIRHITQSHLSEYSSQGLRTLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGI 315 (658)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~ 315 (658)
... ++..++.+.+++++|+.+|+|||++|||.++++++.+|.++|.++...+.+|++.+.+....+|.|++++|.+++
T Consensus 646 ~~~--~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dL~~lG~~~~ 723 (1178)
T PLN03190 646 RSL--NMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAALLRKVASNVENNLTILGASAI 723 (1178)
T ss_pred ccc--cchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhhhhhhhHHHHHhhHHhhhcCcEEEEEEEE
Confidence 543 234677889999999999999999999999999999999999999999999999998888889999999999999
Q ss_pred ccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCcccc
Q 041225 316 EDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTK 395 (658)
Q Consensus 316 ~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~ 395 (658)
+|++++++.++|++|+++||++||+|||+..+|.+||++||++.++...+..+....+.+.+.++........
T Consensus 724 ~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i~~~~~~~~~~~l~~~~~~~~~------- 796 (1178)
T PLN03190 724 EDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIINSNSKESCRKSLEDALVMSKK------- 796 (1178)
T ss_pred ecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEecCCchhhHHHHHHHHhhhhhh-------
Confidence 9999999999999999999999999999999999999999999998887777766554443333221110000
Q ss_pred ccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCccc
Q 041225 396 CNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQ 475 (658)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~ 475 (658)
.... ...................++++|.++..++...+...+..++..+..+|+||++|.|
T Consensus 797 -------------~~~~-----~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~Q 858 (1178)
T PLN03190 797 -------------LTTV-----SGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQ 858 (1178)
T ss_pred -------------cccc-----ccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHH
Confidence 0000 0000000000011224567999999999988777777888888889999999999999
Q ss_pred HHHHHHHHHhcCCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhcccccccccchHHHHhhhhhhHHHHHHHHHH
Q 041225 476 KAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLVHGHWNYQRIGYLVL 555 (658)
Q Consensus 476 K~~~v~~L~~~~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~~gr~~~~~~~~~i~ 555 (658)
|+.+|+.+++..+..|+|||||.||++||++|||||+++|.++.+|+.+|||+++.|+++.+|+|+|||++|+|++++++
T Consensus 859 Ka~IV~~vk~~~~~vtlaIGDGaNDv~mIq~AdVGIGIsG~EG~qA~~aSDfaI~~Fr~L~rLLlvHGr~~y~R~s~~i~ 938 (1178)
T PLN03190 859 KAGIVALVKNRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRFLVPLLLVHGHWNYQRMGYMIL 938 (1178)
T ss_pred HHHHHHHHHhcCCcEEEEECCCcchHHHHHhcCeeeeecCchhHHHHHhhccchhhhHHHHHHHHHhCHHHHHHHHHHHH
Confidence 99999999997557899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHHHHHhhhhhhhheecccCCChHHHhhCCcccccccc--------
Q 041225 556 YNFYRNAVFVLMLFWYILFTGFSTTSALTDWSSVFYSLLYTSVPTIVVGIVDKDLSHKTLMQYPKLYVVQQY-------- 627 (658)
Q Consensus 556 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~n~~~~~~p~~~~~~~~~~~~~~~~~~~p~~y~~~~~-------- 627 (658)
|+||||+++++++|||+++++|||++++++|.+++||++||++|++++|++|+|++++.++++|++|+.++.
T Consensus 939 y~fYKN~~~~~~qf~f~~~~~fSg~~ly~~~~~~~yN~~fTslPii~~~ifD~dv~~~~l~~~P~LY~~~~~~~~~n~~~ 1018 (1178)
T PLN03190 939 YNFYRNAVFVLVLFWYVLFTCFTLTTAINEWSSVLYSVIYTALPTIVVGILDKDLSRRTLLKYPQLYGAGQRQEAYNSKL 1018 (1178)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhCcHhhhhhccCCccCHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999988762
Q ss_pred chHHHHHHHHHHHHHhhcccc
Q 041225 628 LWPSDIQIAREAEVLRKGSNY 648 (658)
Q Consensus 628 ~~~~~~~~~~~~~~~~~~~~~ 648 (658)
+|.-++..+..+.+..+++.|
T Consensus 1019 F~~w~~~~i~qs~iiff~~~~ 1039 (1178)
T PLN03190 1019 FWLTMIDTLWQSAVVFFVPLF 1039 (1178)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 344455555666665555544
|
|
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-101 Score=861.61 Aligned_cols=597 Identities=47% Similarity=0.763 Sum_probs=512.6
Q ss_pred CeEEeeeeeehhccccccccCCCCCeeeeccCCcccccccceEEEeccCcccccceEEEEEEEEcCcccCCchhhHHH-H
Q 041225 1 MELVRLGQSYFMIEDKHMYDSSSGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCGKNYGNSLLLAQQ-V 79 (658)
Q Consensus 1 ~e~~~~~~~~~~~~d~~~~~~~~~~~i~vr~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~-~ 79 (658)
+|++|++|++||.||.+||+++.+.++.+|++++.|+||+|++|++|||||||+|.|.|.+|+++|..|++....... .
T Consensus 347 iEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~kCsi~g~~yg~~~~~~~~~~ 426 (1151)
T KOG0206|consen 347 IEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKKCSINGTSYGRNVTEVEAAL 426 (1151)
T ss_pred eeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeeeecccccCcccccCCChhhccc
Confidence 599999999999999999999999999999999999999999999999999999999999999999999876432110 0
Q ss_pred HHH---HHhhhccccccccChHHHHHHhhccCcchhHHHHHHHHHHhhccceeecCCCCCCCCCCCCcccCCcceeeecC
Q 041225 80 SAA---AVRRWKLKSEISVDSKLMELLSKDLVGDERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGE 156 (658)
Q Consensus 80 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (658)
... ..+....++..+.|+.+.+...... ......++|++++|+||++.+..++. ...+.|++.
T Consensus 427 ~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~--~~~~~~~~f~~~la~chtv~~e~~~~------------~~~~~Y~A~ 492 (1151)
T KOG0206|consen 427 AKRSGGDVNEHKIKGFTFEDSRLVDGLWSSE--PQAEDILEFFRALALCHTVIPEKDED------------SGKLSYEAE 492 (1151)
T ss_pred Cccccccccccccccceeccchhhccccccc--cCcchHHHHhhHHhccceeeeccCCC------------ccceeeecC
Confidence 000 0011112222334444443322211 35556789999999999999875321 237899999
Q ss_pred ChhHHHHHHHHHHcCcEEEEEcCCeEEEEeCCcEEEEEEEEeeCCCCCCCeeEEEEEcCCCcEEEEEeCCchHhHHhhhc
Q 041225 157 SPDEQALVSAASAYGYTLFERTSGHIVIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADSSMFNILAK 236 (658)
Q Consensus 157 ~p~e~al~~~a~~~g~~~~~~~~~~~~~~~~g~~~~~~il~~~~F~s~rk~msviv~~~~~~~~l~~KGa~e~i~~~~~~ 236 (658)
||||.||++.|+.+|+.+..|++..+.+...|+.++|++|+++||+|.|||||||||+|+|++.+||||||.+|++++..
T Consensus 493 SPDE~AlV~aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S~RKRMSVIVR~p~g~i~LycKGADsvI~erL~~ 572 (1151)
T KOG0206|consen 493 SPDEAALVEAARELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNSTRKRMSVIVRDPDGRILLYCKGADSVIFERLSK 572 (1151)
T ss_pred CCcHHHHHHHHHhcCceeeeccCceEEEeccccceeEEEEEEeccccccceeEEEEEcCCCcEEEEEcCcchhhHhhhhh
Confidence 99999999999999999999999999999888888999999999999999999999999999999999999999999996
Q ss_pred CccccHHHHHHHHHHHHHHhhcCCeEEEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccc
Q 041225 237 DSKRNDLIRHITQSHLSEYSSQGLRTLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIE 316 (658)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~ 316 (658)
. .....+...+|+++|+.+|+||||+|||.++++|+.+|.++|.++...+.+|++.++..+..+|.|++|||.+++|
T Consensus 573 ~---~~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~iEk~L~LLGATAIE 649 (1151)
T KOG0206|consen 573 N---GEKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEEIEKDLILLGATAIE 649 (1151)
T ss_pred c---chHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHhcchhhcceeee
Confidence 2 3567888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHH------HHHHHHHhcCccc
Q 041225 317 DKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKD------LLADAKARYGVKS 390 (658)
Q Consensus 317 d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~------ii~~~~~~~~~~~ 390 (658)
|+++++++++|..|++||||+|++|||+.+||.+|+.+|+++.++..++.++..+.+.... +.+....+.
T Consensus 650 DkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~~~~~~~~~~~l~~~~---- 725 (1151)
T KOG0206|consen 650 DKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSEELSSLDATAALKETLLRKF---- 725 (1151)
T ss_pred chhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChhhhcchhhHHHHHHHHHHhh----
Confidence 9999999999999999999999999999999999999999999999999888765331110 001111100
Q ss_pred CccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEE
Q 041225 391 SNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCR 470 (658)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~ 470 (658)
..... ...........+++++|..+...++...+..|...+..|..+|+||
T Consensus 726 ----------------~~~~~-------------~~~~~~~~~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR 776 (1151)
T KOG0206|consen 726 ----------------TEELE-------------EAKLEHSEKPFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCR 776 (1151)
T ss_pred ----------------hHHHH-------------HHhhccCcCCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEcc
Confidence 00000 0000000125789999999999999988889999999999999999
Q ss_pred cCcccHHHHHHHHHhcCCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhcccccccccchHHHHhhhhhhHHHHH
Q 041225 471 VAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLVHGHWNYQRI 550 (658)
Q Consensus 471 ~~~~~K~~~v~~L~~~~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~~gr~~~~~~ 550 (658)
++|.||+..++.+++..+..++|||||+||++|++.||+||+++|.++.+|..+||+.++.|+++.+|+|+||||+|.|+
T Consensus 777 ~sPlQKA~Vv~lVk~~~~~~TLAIGDGANDVsMIQ~AhVGVGIsG~EGmQAvmsSD~AIaqFrfL~rLLLVHGhW~Y~R~ 856 (1151)
T KOG0206|consen 777 VSPLQKALVVKLVKKGLKAVTLAIGDGANDVSMIQEAHVGVGISGQEGMQAVMSSDFAIAQFRFLERLLLVHGHWSYIRL 856 (1151)
T ss_pred CCHHHHHHHHHHHHhcCCceEEEeeCCCccchheeeCCcCeeeccchhhhhhhcccchHHHHHHHhhhheeecceeHHHH
Confidence 99999999999998777789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHHHHHhhhhhhhheecccCCChHHHhhCCccccccc----
Q 041225 551 GYLVLYNFYRNAVFVLMLFWYILFTGFSTTSALTDWSSVFYSLLYTSVPTIVVGIVDKDLSHKTLMQYPKLYVVQQ---- 626 (658)
Q Consensus 551 ~~~i~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~n~~~~~~p~~~~~~~~~~~~~~~~~~~p~~y~~~~---- 626 (658)
++++.|+||||+++++++|||+++++|||++++++|++.+||++||++|++++|++|+|++...++++|+||+.+|
T Consensus 857 a~~ilyfFYKNi~f~~~~fwy~f~~gfSgq~~yd~~~l~lyNv~FTSlPvi~lGvfdqDvsa~~~l~~P~LY~~g~~~~~ 936 (1151)
T KOG0206|consen 857 AKMILYFFYKNIAFTFTLFWYQFFNGFSGQTLYDDWYLSLYNVLFTSLPVIVLGVFDQDVSAETLLRFPELYQRGQLNLL 936 (1151)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccccceEEEEEeEEeecCchhheeecccCCCHHHHhhCCcchhhhhhccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred cchHHHHHHHHHHHHHhhccc
Q 041225 627 YLWPSDIQIAREAEVLRKGSN 647 (658)
Q Consensus 627 ~~~~~~~~~~~~~~~~~~~~~ 647 (658)
+.|+.+.--+..++.....-+
T Consensus 937 f~~~~f~~~~~~g~~~sli~F 957 (1151)
T KOG0206|consen 937 FNWKRFWGWMLDGFYQSLVIF 957 (1151)
T ss_pred cchHHHHHHHHHHHHhheeee
Confidence 466665555555444443333
|
|
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-91 Score=818.91 Aligned_cols=598 Identities=46% Similarity=0.782 Sum_probs=493.3
Q ss_pred CeEEeeeeeehhccccccccCCCCCeeeeccCCcccccccceEEEeccCcccccceEEEEEEEEcCcccCCchhhHHHHH
Q 041225 1 MELVRLGQSYFMIEDKHMYDSSSGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCGKNYGNSLLLAQQVS 80 (658)
Q Consensus 1 ~e~~~~~~~~~~~~d~~~~~~~~~~~i~vr~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~ 80 (658)
+|++|++|++||+||.+|+++.++++++||+++++|+||+|++||||||||||+|+|+|++|+++|..|+..........
T Consensus 319 l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y~~~~~~~~~~~ 398 (1057)
T TIGR01652 319 LELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTEIKDAI 398 (1057)
T ss_pred HHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEecCCcchHHHHh
Confidence 47899999999999999999888899999999999999999999999999999999999999999998875322111100
Q ss_pred HHHHhhhcc---------ccccccChHHHHHHhhccCcchhHHHHHHHHHHhhccceeecCCCCCCCCCCCCcccCCcce
Q 041225 81 AAAVRRWKL---------KSEISVDSKLMELLSKDLVGDERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAI 151 (658)
Q Consensus 81 ~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (658)
......+.+ +...+.++++.+.+.. ........+++++++++||++.+..++. ..+.+
T Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~l~lC~~v~~~~~~~-----------~~~~~ 465 (1057)
T TIGR01652 399 RERLGSYVENENSMLVESKGFTFVDPRLVDLLKT--NKPNAKRINEFFLALALCHTVVPEFNDD-----------GPEEI 465 (1057)
T ss_pred hhcccccccccccccccccccccCcHHHHHhhhc--CCchhHHHHHHHHHHHhcCcccccccCC-----------CCCce
Confidence 000000000 0011224444443321 1222345788999999999998753111 11236
Q ss_pred eeecCChhHHHHHHHHHHcCcEEEEEcCC--eEEEEeCCcEEEEEEEEeeCCCCCCCeeEEEEEcCCCcEEEEEeCCchH
Q 041225 152 DYQGESPDEQALVSAASAYGYTLFERTSG--HIVIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADSS 229 (658)
Q Consensus 152 ~~~~~~p~e~al~~~a~~~g~~~~~~~~~--~~~~~~~g~~~~~~il~~~~F~s~rk~msviv~~~~~~~~l~~KGa~e~ 229 (658)
.|.++||+|.||+++|+.+|+.+.+++.. .+.+++.|...+|++++++||+|+|||||||++++++.+.+|+||||+.
T Consensus 466 ~y~~~sp~E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~~~~~~l~~KGA~e~ 545 (1057)
T TIGR01652 466 TYQAASPDEAALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGADTV 545 (1057)
T ss_pred EEEccCCcHHHHHHHHHHCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccCCCCCeEEEEEEeCCCeEEEEEeCcHHH
Confidence 78889999999999999999999999887 5667888999999999999999999999999999999999999999999
Q ss_pred hHHhhhcCccccHHHHHHHHHHHHHHhhcCCeEEEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhcccee
Q 041225 230 MFNILAKDSKRNDLIRHITQSHLSEYSSQGLRTLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTL 309 (658)
Q Consensus 230 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTl 309 (658)
|+++|... ++..++.+.+++++|+.+|+||+++|||.++++++.+|.++|.++...+.+|++.+......+|.|++|
T Consensus 546 il~~~~~~---~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~L~~ 622 (1057)
T TIGR01652 546 IFKRLSSG---GNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIEKDLIL 622 (1057)
T ss_pred HHHHhhcc---chhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCEE
Confidence 99999853 234577889999999999999999999999999999999999999999999988888888889999999
Q ss_pred eeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcc
Q 041225 310 LGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVK 389 (658)
Q Consensus 310 lg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~ 389 (658)
+|.+|++|+++++++++|+.|+++||++||+|||+.+||.++|+++|++..+.+++..++.+.+++...-........
T Consensus 623 lG~~gieD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~~~~-- 700 (1057)
T TIGR01652 623 LGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSVEAAIKFGLE-- 700 (1057)
T ss_pred EEEEEEhhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHHHHHHHHHHH--
Confidence 999999999999999999999999999999999999999999999999998887777776554443322111111000
Q ss_pred cCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEE
Q 041225 390 SSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCC 469 (658)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~ 469 (658)
...... ..........++++|+++..++++..+.++..++..++.+|++
T Consensus 701 --------------~~~~~~-----------------~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~a 749 (1057)
T TIGR01652 701 --------------GTSEEF-----------------NNLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICC 749 (1057)
T ss_pred --------------HHHHhh-----------------hhhccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEe
Confidence 000000 0001124567899999998888777677788888888899999
Q ss_pred EcCcccHHHHHHHHHhcCCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhcccccccccchHHHHhhhhhhHHHH
Q 041225 470 RVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLVHGHWNYQR 549 (658)
Q Consensus 470 ~~~~~~K~~~v~~L~~~~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~~gr~~~~~ 549 (658)
|++|.||+.+|+.+++..+..|+|+|||.||++||++|||||++.|.++.+|+.+||+++.+|+++.+++++|||++|+|
T Consensus 750 R~sP~qK~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~AdVGIgi~g~eg~qA~~aaD~~i~~F~~L~~lll~~GR~~~~r 829 (1057)
T TIGR01652 750 RVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGVGISGKEGMQAVMASDFAIGQFRFLTKLLLVHGRWSYKR 829 (1057)
T ss_pred CCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHhhcCeeeEecChHHHHHHHhhhhhhhhHHHHHHHHHhhCHHHHHH
Confidence 99999999999999987467999999999999999999999999999988899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHHHHHhhhhhhhheecccCCChHHHhhCCccccccc---
Q 041225 550 IGYLVLYNFYRNAVFVLMLFWYILFTGFSTTSALTDWSSVFYSLLYTSVPTIVVGIVDKDLSHKTLMQYPKLYVVQQ--- 626 (658)
Q Consensus 550 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~n~~~~~~p~~~~~~~~~~~~~~~~~~~p~~y~~~~--- 626 (658)
+++++.|.||+|+++++++|+|.++++|++++++++|+++|||+++|++|++++|++++|++++.+.++|++|+.++
T Consensus 830 ~~~~i~~~~~kn~~~~~~~~~~~~~~~~s~~~~~~~~~l~~~n~~~t~lp~~~l~~~d~~~~~~~l~~~P~ly~~~~~~~ 909 (1057)
T TIGR01652 830 ISKMILYFFYKNLIFAIIQFWYSFYNGFSGQTLYEGWYMVLYNVFFTALPVISLGVFDQDVSASLSLRYPQLYREGQKGQ 909 (1057)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhChHHHHHhhhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999997653
Q ss_pred -----cchHHHHHHHHHHHHHhhccc
Q 041225 627 -----YLWPSDIQIAREAEVLRKGSN 647 (658)
Q Consensus 627 -----~~~~~~~~~~~~~~~~~~~~~ 647 (658)
..|..+++.+.++.+...++.
T Consensus 910 ~~~~~~f~~~~~~~~~~~~ii~~~~~ 935 (1057)
T TIGR01652 910 GFSTKTFWGWMLDGIYQSLVIFFFPM 935 (1057)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 233344555555555544443
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-85 Score=669.58 Aligned_cols=541 Identities=35% Similarity=0.554 Sum_probs=467.8
Q ss_pred CeEEeeeeeehhccccccccCCCCCeeeeccCCcccccccceEEEeccCcccccceEEEEEEEEcCcccCCchhhHHHHH
Q 041225 1 MELVRLGQSYFMIEDKHMYDSSSGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCGKNYGNSLLLAQQVS 80 (658)
Q Consensus 1 ~e~~~~~~~~~~~~d~~~~~~~~~~~i~vr~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~ 80 (658)
+++.|++.|+.|+.|.+-. |.+||++++.|+||+|+++.+|||||||+|+|.+++++.+-..|+.+.. ++.+
T Consensus 373 lDmaK~~ys~~i~~D~~Ip------gtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~e~~--~eV~ 444 (1051)
T KOG0210|consen 373 LDMAKIVYSWQIEHDKNIP------GTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSAETM--DEVS 444 (1051)
T ss_pred hhHHHhhHhhhcccCCCCC------ceeeecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeeccHhHH--HHHH
Confidence 4678999999999998774 3899999999999999999999999999999999999988777764322 2222
Q ss_pred HHHHhhhccccccccChHHHHHHhhccCcchhHHHHHHHHHHhhccceeecCCCCCCCCCCCCcccCCcceeeecCChhH
Q 041225 81 AAAVRRWKLKSEISVDSKLMELLSKDLVGDERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDE 160 (658)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e 160 (658)
..-++-+.+... -.+-..... ..+-+..+++..+++|+||+++|..+++ +...|++.||||
T Consensus 445 ~~i~s~~~~~~~--~~~~~~~~~----k~~~s~rv~~~V~alalCHNVTPv~e~~-------------ge~sYQAaSPDE 505 (1051)
T KOG0210|consen 445 QHIQSLYTPGRN--KGKGALSRV----KKDMSARVRNAVLALALCHNVTPVFEDD-------------GEVSYQAASPDE 505 (1051)
T ss_pred HHHHHhhCCCcc--cccccchhh----cCcccHHHHHHHHHHHHhccCCcccCCC-------------ceEEeecCCCCe
Confidence 222222221000 000001011 1234456889999999999999986553 578999999999
Q ss_pred HHHHHHHHHcCcEEEEEcCCeEEEEeC-CcEEEEEEEEeeCCCCCCCeeEEEEEcC-CCcEEEEEeCCchHhHHhhhcCc
Q 041225 161 QALVSAASAYGYTLFERTSGHIVIDIN-GEGLRLDVLGLHEFDSVRKRMSVVIRFP-DNSVKVLVKGADSSMFNILAKDS 238 (658)
Q Consensus 161 ~al~~~a~~~g~~~~~~~~~~~~~~~~-g~~~~~~il~~~~F~s~rk~msviv~~~-~~~~~l~~KGa~e~i~~~~~~~~ 238 (658)
.||+++....|..+..|+.+.+.+..+ +....|+||.+|||+|+.|||++|||++ .+++..|.||||.+|..+....
T Consensus 506 VAiVkwTe~VGl~L~~Rd~~~itL~~~~~~~~~yqIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iVq~N- 584 (1051)
T KOG0210|consen 506 VAIVKWTETVGLKLAKRDRHAITLRVPLDDELNYQILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIVQYN- 584 (1051)
T ss_pred EEEEEeeeecceEEeecccceEEEecCCCcceeEEEEEEeccccccceeeEEEecCCCceEEEEEecchHHHhcccccc-
Confidence 999999999999999999999888766 5678999999999999999999999998 5889999999999998887642
Q ss_pred cccHHHHHHHHHHHHHHhhcCCeEEEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHH-hhhccceeeecccccc
Q 041225 239 KRNDLIRHITQSHLSEYSSQGLRTLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAA-LIECDLTLLGATGIED 317 (658)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~d~DgTllg~~~~~d 317 (658)
..+++...+||++|+|+|++|+|.|+++|++.|...|+++..+..+|.++|.+... .+|.|+.|||..|+||
T Consensus 585 -------dWleEE~gNMAREGLRtLVvakK~Ls~~eye~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVED 657 (1051)
T KOG0210|consen 585 -------DWLEEECGNMAREGLRTLVVAKKVLSEEEYEAFEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVED 657 (1051)
T ss_pred -------hhhhhhhhhhhhhcceEEEEEecccCHHHHHHHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHH
Confidence 34567788999999999999999999999999999999999999999999998888 8999999999999999
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCC-CHHHHHHHHHHHHHhcCcccCccccc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGN-SEEECKDLLADAKARYGVKSSNRTKC 396 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~-~~~~~~~ii~~~~~~~~~~~~~~~~~ 396 (658)
+++++++.+++.||++||++||+|||+.+||..+|++.+++..++.+..+... +.+++..-++.++.
T Consensus 658 kLQ~dVk~tLElLRNAgikiWMLTGDKlETA~ciAkSs~L~sR~q~ihv~~~v~sr~dah~eL~~lR~------------ 725 (1051)
T KOG0210|consen 658 KLQDDVKPTLELLRNAGIKIWMLTGDKLETAICIAKSSRLFSRGQYIHVIRSVTSRGDAHNELNNLRR------------ 725 (1051)
T ss_pred HHhhhhHhHHHHHhhcCcEEEEEcCcchhheeeeehhccceecCceEEEEEecCCchHHHHHHHHhhc------------
Confidence 99999999999999999999999999999999999999999877665554432 34444444433332
Q ss_pred cccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccH
Q 041225 397 NSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQK 476 (658)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K 476 (658)
....+++++|+++...++- .+.++.+++..++.+++||++|.||
T Consensus 726 -----------------------------------k~~~aLvi~G~Sl~~cl~y-ye~Ef~el~~~~~aVv~CRctPtQK 769 (1051)
T KOG0210|consen 726 -----------------------------------KTDCALVIDGESLEFCLKY-YEDEFIELVCELPAVVCCRCTPTQK 769 (1051)
T ss_pred -----------------------------------CCCcEEEEcCchHHHHHHH-HHHHHHHHHHhcCcEEEEecChhHH
Confidence 2445889999998776654 5678889999999999999999999
Q ss_pred HHHHHHHHhcCCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhcccccccccchHHHHhhhhhhHHHHHHHHHHH
Q 041225 477 AGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLVHGHWNYQRIGYLVLY 556 (658)
Q Consensus 477 ~~~v~~L~~~~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~~gr~~~~~~~~~i~~ 556 (658)
+++++.|+++.+..|+|||||.||++|+++||+||++.|+++.+|.-||||.++.|..+.+|+++|||.+|.|.+++.+|
T Consensus 770 A~v~~llq~~t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASLAADfSItqF~Hv~rLLl~HGR~SYkrsa~laqf 849 (1051)
T KOG0210|consen 770 AQVVRLLQKKTGKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASLAADFSITQFSHVSRLLLWHGRNSYKRSAKLAQF 849 (1051)
T ss_pred HHHHHHHHHhhCceEEEEcCCCccchheeecccceeeecccccccchhccccHHHHHHHHHHhhccccchHHHHHHHHHH
Confidence 99999999997789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHHHHHhhhhhhhheecccCCChHHHhhCCcccccc
Q 041225 557 NFYRNAVFVLMLFWYILFTGFSTTSALTDWSSVFYSLLYTSVPTIVVGIVDKDLSHKTLMQYPKLYVVQ 625 (658)
Q Consensus 557 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~n~~~~~~p~~~~~~~~~~~~~~~~~~~p~~y~~~ 625 (658)
.+.|++++..++.+|+....|...+++..++++.|..++|++|+|.+ +.|+|+++...+.||+||+..
T Consensus 850 ViHRGL~Is~~Qavfs~v~yF~~V~LyqG~LmvgysT~YTmlPVFSl-v~d~Dv~~~~a~~yPELYKeL 917 (1051)
T KOG0210|consen 850 VIHRGLIISTMQAVFSSVFYFAPVALYQGFLMVGYSTCYTMLPVFSL-VLDRDVSESLAVLYPELYKEL 917 (1051)
T ss_pred HHhhhHHHHHHHHHHHHHhhhcchHHhhhhHHHHHHHHHHHhhhhee-eecccccHHHHhhhHHHHHHH
Confidence 99999999999999999988999999999999999999999999999 899999999999999999883
|
|
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-70 Score=626.28 Aligned_cols=431 Identities=35% Similarity=0.507 Sum_probs=355.4
Q ss_pred CCCeeeeccCCcccccccceEEEeccCcccccceEEEEEEEEcC-cccCCchhhHHHHHHHHHhhhccccccccChHHHH
Q 041225 23 SGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCG-KNYGNSLLLAQQVSAAAVRRWKLKSEISVDSKLME 101 (658)
Q Consensus 23 ~~~~i~vr~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (658)
.+++++||+++++|+||++++||||||||||+|+|+|.++++++ ..... +
T Consensus 330 ak~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~~~~-------------------------~---- 380 (917)
T COG0474 330 AKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDID-------------------------D---- 380 (917)
T ss_pred HhccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCCccccc-------------------------c----
Confidence 46679999999999999999999999999999999999999985 11000 0
Q ss_pred HHhhccCcchhHHHHHHHHHHhhccceeecCCCCCCCCCCCCcccCCcceeeecCChhHHHHHHHHHHcCcEEEEEcCCe
Q 041225 102 LLSKDLVGDERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYTLFERTSGH 181 (658)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~ 181 (658)
..........++++++++||++.+.. . + .+..+||+|.||++++.+.|+.+ .
T Consensus 381 -----~~~~~~~~~~~~l~~~~lc~~~~~~~--------------~-~--~~~~gdptE~Al~~~a~~~~~~~-~----- 432 (917)
T COG0474 381 -----KDLKDSPALLRFLLAAALCNSVTPEK--------------N-G--WYQAGDPTEGALVEFAEKLGFSL-D----- 432 (917)
T ss_pred -----cccccchHHHHHHHHHHhcCcccccc--------------c-C--ceecCCccHHHHHHHHHhcCCcC-C-----
Confidence 00112223447899999999876531 1 1 45566999999999999998754 1
Q ss_pred EEEEeCCcEEEEEEEEeeCCCCCCCeeEEEEEcCCCcEEEEEeCCchHhHHhhhcC---ccccHHHHHHHHHHHHHHhhc
Q 041225 182 IVIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADSSMFNILAKD---SKRNDLIRHITQSHLSEYSSQ 258 (658)
Q Consensus 182 ~~~~~~g~~~~~~il~~~~F~s~rk~msviv~~~~~~~~l~~KGa~e~i~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 258 (658)
..+....+++++.+||+|+|||||||++..++++.+|+|||||.|+++|+.. ...++..++.+....++|+.+
T Consensus 433 ----~~~~~~~~~~~~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~il~~~~~~~~~~~~~~~~~~~~~~~~~~la~~ 508 (917)
T COG0474 433 ----LSGLEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSIGELEPLTEEGLRTLEEAVKELASE 508 (917)
T ss_pred ----HHHHhhhcceeEEecCCCCceEEEEEEEcCCCcEEEEEcCChHHHHHHhcccCcccccCHHHHHHHHHHHHHHHHH
Confidence 1122345588999999999999999999887889999999999999999852 234567789999999999999
Q ss_pred CCeEEEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEE
Q 041225 259 GLRTLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVW 338 (658)
Q Consensus 259 G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~ 338 (658)
|+|||++|||.++..+... .. ...+.|++|+|.++++|++|+++++||+.|+++||++|
T Consensus 509 glRvla~A~k~~~~~~~~~--------------------~~-~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~ 567 (917)
T COG0474 509 GLRVLAVAYKKLDRAEKDD--------------------EV-DEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVW 567 (917)
T ss_pred HHHHHHHHhccCCcccccc--------------------hh-hhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEE
Confidence 9999999999776553210 01 34678999999999999999999999999999999999
Q ss_pred EEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCC
Q 041225 339 VLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFS 418 (658)
Q Consensus 339 i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (658)
|+|||+..||.+||+++|+......
T Consensus 568 MiTGD~~~TA~aIa~~~Gi~~~~~~------------------------------------------------------- 592 (917)
T COG0474 568 MITGDHVETAIAIAKECGIEAEAES------------------------------------------------------- 592 (917)
T ss_pred EECCCCHHHHHHHHHHcCCCCCCCc-------------------------------------------------------
Confidence 9999999999999999997543210
Q ss_pred CCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhcCCCeEEEEcCCc
Q 041225 419 DVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGA 498 (658)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~~~~~v~aiGDg~ 498 (658)
.++++|.++....++++ ...+.... |++|++|.||..+|+.|+++ ++.|+|+|||.
T Consensus 593 -----------------~~vi~G~el~~l~~~el----~~~~~~~~--VfARvsP~qK~~IV~~lq~~-g~vVamtGDGv 648 (917)
T COG0474 593 -----------------ALVIDGAELDALSDEEL----AELVEELS--VFARVSPEQKARIVEALQKS-GHVVAMTGDGV 648 (917)
T ss_pred -----------------eeEeehHHhhhcCHHHH----HHHhhhCc--EEEEcCHHHHHHHHHHHHhC-CCEEEEeCCCc
Confidence 34566666655555432 23333323 99999999999999999999 78999999999
Q ss_pred CChhhhhhcceeEEecCccchhhhhhcccccccccchHHHHhh-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 041225 499 NDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLV-HGHWNYQRIGYLVLYNFYRNAVFVLMLFWYILFTGF 577 (658)
Q Consensus 499 NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~-~gr~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 577 (658)
||+||||.||+||||.+++.+.+|++||+++.++++.....++ |||+.|.|+++++.|.+++|+..+++++++.+++.+
T Consensus 649 NDapALk~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~av~eGR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~ 728 (917)
T COG0474 649 NDAPALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSLFNLF 728 (917)
T ss_pred hhHHHHHhcCccEEecccHHHHHHhhcceEeecCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999997777777999999999999998888766 999999999999999999999999999999988765
Q ss_pred ccccchhhHHHHHHHHHHhhhhhhhheecccCCChHHHhhCC
Q 041225 578 STTSALTDWSSVFYSLLYTSVPTIVVGIVDKDLSHKTLMQYP 619 (658)
Q Consensus 578 s~~~~~~~~~~~~~n~~~~~~p~~~~~~~~~~~~~~~~~~~p 619 (658)
..|+.+++++|+|++++++|++++++++ ++...+.+|
T Consensus 729 --~~p~~~~qll~inll~d~~pa~~L~~~~---~~~~~m~~~ 765 (917)
T COG0474 729 --FLPLTPLQLLWINLLTDSLPALALGVED---PESDVMKRP 765 (917)
T ss_pred --cccHHHHHHHHHHHHHhhhhhheeecCC---CcccccccC
Confidence 6899999999999999999999999877 344455555
|
|
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-68 Score=556.33 Aligned_cols=500 Identities=24% Similarity=0.275 Sum_probs=385.9
Q ss_pred CCCeeeeccCCcccccccceEEEeccCcccccceEEEEEEEEcCcccCCchhhHHHHHHHHHhhhccccccccChHHHHH
Q 041225 23 SGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCGKNYGNSLLLAQQVSAAAVRRWKLKSEISVDSKLMEL 102 (658)
Q Consensus 23 ~~~~i~vr~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (658)
.+++++||++.++|+||.+++||||||||||+|+|++.++++.+..+... ........+|.+.+++..+..-..
T Consensus 314 akknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~-----~~f~~tg~ty~~~g~v~~~~~~~~- 387 (972)
T KOG0202|consen 314 AKKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATV-----DEFNPTGTTYSPEGEVFKDGLYEK- 387 (972)
T ss_pred HhhhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccc-----cccccCCceeCCCCceEecCcccc-
Confidence 57889999999999999999999999999999999999999988655432 001112233444443333221000
Q ss_pred HhhccCcchhHHHHHHHHHHhhccceeecCCCCCCCCCCCCcccCCcceeeecCChhHHHHHHHHHHcCcEEEEEcCCeE
Q 041225 103 LSKDLVGDERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYTLFERTSGHI 182 (658)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~~ 182 (658)
...-....+++++.+.++||......++ .+.++..| .|+|.||..++.++|+.-.......
T Consensus 388 ----~~~~~~~~l~~l~~i~~lCNda~v~~~~-------------~~~~~~~G-~pTE~AL~vlaeKm~l~~~~~~~~s- 448 (972)
T KOG0202|consen 388 ----DKAGDNDLLQELAEICALCNDATVEYND-------------ADCYEKVG-EPTEGALIVLAEKMGLPGTRSTNLS- 448 (972)
T ss_pred ----ccccccHHHHHHHHHHHhhhhhhhhcCc-------------hhhHHhcC-CchHHHHHHHHHHcCCCcchhhccc-
Confidence 0112344578899999999987764332 13455555 9999999999999997653311100
Q ss_pred EEEeCC-----cEEEEEEEEeeCCCCCCCeeEEEEEcCCCc--EEEEEeCCchHhHHhhhcCc--------cccHHHHHH
Q 041225 183 VIDING-----EGLRLDVLGLHEFDSVRKRMSVVIRFPDNS--VKVLVKGADSSMFNILAKDS--------KRNDLIRHI 247 (658)
Q Consensus 183 ~~~~~g-----~~~~~~il~~~~F~s~rk~msviv~~~~~~--~~l~~KGa~e~i~~~~~~~~--------~~~~~~~~~ 247 (658)
..+ .+ -...++-.+.+||+|+||+|||.+.++.+. +.+|+|||+|.|+++|+... ..++..++.
T Consensus 449 ~~~-~~~c~~~~~~~~~~~~elpFssdrK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~ 527 (972)
T KOG0202|consen 449 NEE-ASACNRVYSRLFKKIAELPFSSDRKSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRET 527 (972)
T ss_pred ccc-cccchhHHHHhhhheeEeecccccceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHH
Confidence 001 11 012356668999999999999999988765 89999999999999996432 356788999
Q ss_pred HHHHHHHHhhcCCeEEEEEEecCCH-HHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccccCCChHHH
Q 041225 248 TQSHLSEYSSQGLRTLVVASRDLAD-EELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEA 326 (658)
Q Consensus 248 ~~~~~~~~~~~G~r~l~~a~k~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~l~~~~~~a 326 (658)
+.+...+|+..|+|+|++|++..+. .... ........+...|.|+||+|.+|+.|++|++++++
T Consensus 528 il~~~~~~g~~gLRvLalA~~~~~~~~~~~---------------~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~a 592 (972)
T KOG0202|consen 528 ILANVYEMGSEGLRVLALASKDSPGQVPDD---------------QDLNDTSNRATAESDLTFVGLVGILDPPRPEVADA 592 (972)
T ss_pred HHHHHHHHhhccceEEEEEccCCcccChhh---------------hhhcccccccccccceEEEEEeeccCCCchhHHHH
Confidence 9999999999999999999998764 1100 00000113445788999999999999999999999
Q ss_pred HHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHH
Q 041225 327 IEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEI 406 (658)
Q Consensus 327 I~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (658)
|+.|+++||+|.|+|||+..||.+||+++|+...+..+ .
T Consensus 593 i~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~-~---------------------------------------- 631 (972)
T KOG0202|consen 593 IELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDEDV-S---------------------------------------- 631 (972)
T ss_pred HHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCccc-c----------------------------------------
Confidence 99999999999999999999999999999986653321 0
Q ss_pred HHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhc
Q 041225 407 EYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSR 486 (658)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~ 486 (658)
....+|.++...-..++.. .. ....+++|+.|.+|..+|+.|++.
T Consensus 632 -----------------------------~~~~TG~efD~ls~~~~~~----~~--~~~~vFaR~~P~HK~kIVeaLq~~ 676 (972)
T KOG0202|consen 632 -----------------------------SMALTGSEFDDLSDEELDD----AV--RRVLVFARAEPQHKLKIVEALQSR 676 (972)
T ss_pred -----------------------------ccccchhhhhcCCHHHHHH----Hh--hcceEEEecCchhHHHHHHHHHhc
Confidence 0012222222211111111 01 125689999999999999999998
Q ss_pred CCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhcccccccccchHHHHhh-hhhhHHHHHHHHHHHHHHHHHHHH
Q 041225 487 TDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLV-HGHWNYQRIGYLVLYNFYRNAVFV 565 (658)
Q Consensus 487 ~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~-~gr~~~~~~~~~i~~~~~~~~~~~ 565 (658)
++.|+|.|||.||.|+||.||+||||.-++.+.+|+|||+|+.|++|..++-.+ |||.+|.|+++++.|.+..|+...
T Consensus 677 -geivAMTGDGVNDApALK~AdIGIAMG~~GTdVaKeAsDMVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSsnVgev 755 (972)
T KOG0202|consen 677 -GEVVAMTGDGVNDAPALKKADIGIAMGISGTDVAKEASDMVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSSNVGEV 755 (972)
T ss_pred -CCEEEecCCCccchhhhhhcccceeecCCccHhhHhhhhcEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhhhHHHH
Confidence 789999999999999999999999994477788999999999999999999998 899999999999999999999999
Q ss_pred HHHHHHHHhhccccccchhhHHHHHHHHHHhhhhhhhheecccCCChHHHhhCCccccccccchHHHHHHHHHHHHHhhc
Q 041225 566 LMLFWYILFTGFSTTSALTDWSSVFYSLLYTSVPTIVVGIVDKDLSHKTLMQYPKLYVVQQYLWPSDIQIAREAEVLRKG 645 (658)
Q Consensus 566 ~~~~~~~~~~~~s~~~~~~~~~~~~~n~~~~~~p~~~~~~~~~~~~~~~~~~~p~~y~~~~~~~~~~~~~~~~~~~~~~~ 645 (658)
.+.|+...+ ..+.|++++|++|+|++++.+|+-++|+ .+++.+.+.+.|.-.+.+-..|..++...+.+...+-+
T Consensus 756 ~~I~l~aa~---~~p~pL~pvQiLWiNlvtDG~PA~aLG~--ep~D~DiM~kpPR~~~~~iit~~l~~r~l~~g~~vg~~ 830 (972)
T KOG0202|consen 756 VLIFLTAAF---GIPEPLIPVQILWINLVTDGPPATALGF--EPVDPDIMKKPPRDSKDGIITGWLIFRYLAIGIIVGVA 830 (972)
T ss_pred HHHHHHHHh---CCCCcccchhhheeeeeccCCchhhcCC--CCCChhHHhCCCCCCCCCeeeHHHHHHHHHhheeeeee
Confidence 888888777 5678999999999999999999999997 45577788888888888888888999988888766544
|
|
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-64 Score=585.03 Aligned_cols=504 Identities=20% Similarity=0.279 Sum_probs=357.9
Q ss_pred CCCeeeeccCCcccccccceEEEeccCcccccceEEEEEEEEcCc-ccCCch----hhH--HHHHHH-HHhhhccccccc
Q 041225 23 SGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCGK-NYGNSL----LLA--QQVSAA-AVRRWKLKSEIS 94 (658)
Q Consensus 23 ~~~~i~vr~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~-~~~~~~----~~~--~~~~~~-~~~~~~~~~~~~ 94 (658)
.+++++||+++++|+||++++||+|||||||+|+|+|.++|+++. .+.... ..+ ...... ....+.......
T Consensus 341 ak~~~lVr~L~avEtLG~vtvICsDKTGTLT~N~M~V~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 420 (1053)
T TIGR01523 341 SKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDNSDDAFNPNEGNVSGIPRFSPYEYSHNEA 420 (1053)
T ss_pred HhcCCEeccchhhhhccCccEEEecCcCccccceEEEEEEEEcCCceEEecCCCCCCCCccccccccccccccccccccc
Confidence 456899999999999999999999999999999999999998752 111000 000 000000 000000000000
Q ss_pred cChHHHHHHhhcc-----Cc-chhHHHHHHHHHHhhccceeecCCCCCCCCCCCCcccCCcceeeecCChhHHHHHHHHH
Q 041225 95 VDSKLMELLSKDL-----VG-DERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAAS 168 (658)
Q Consensus 95 ~~~~~~~~~~~~~-----~~-~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~a~ 168 (658)
.+++..+...... .. ......++++.++++||+.....++. .+.+... ++|+|.||++++.
T Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lcn~a~~~~~~~------------~~~~~~~-GdptE~ALl~~a~ 487 (1053)
T TIGR01523 421 ADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALANIATVFKDDA------------TDCWKAH-GDPTEIAIHVFAK 487 (1053)
T ss_pred ccccccccccccccccccccccccHHHHHHHHHHHhccCCeeeccCC------------CCceeeC-cCccHHHHHHHHH
Confidence 0000000000000 00 01134567889999999876532210 1122333 4999999999999
Q ss_pred HcCcEEEEE---------cC-CeEEEE---eCCcEEEEEEEEeeCCCCCCCeeEEEEEcCCC-cEEEEEeCCchHhHHhh
Q 041225 169 AYGYTLFER---------TS-GHIVID---INGEGLRLDVLGLHEFDSVRKRMSVVIRFPDN-SVKVLVKGADSSMFNIL 234 (658)
Q Consensus 169 ~~g~~~~~~---------~~-~~~~~~---~~g~~~~~~il~~~~F~s~rk~msviv~~~~~-~~~l~~KGa~e~i~~~~ 234 (658)
+.|+..... .+ ....+. ..+....+++++.+||+|+|||||++++.+++ .+++|+|||||.|+++|
T Consensus 488 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pFds~rK~msvv~~~~~~~~~~~~~KGApe~il~~c 567 (1053)
T TIGR01523 488 KFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAEFPFDSEIKRMASIYEDNHGETYNIYAKGAFERIIECC 567 (1053)
T ss_pred HcCCCcccccchhhhhhhccccccccccccccccccccceEEEeccCCCCCeEEEEEEeCCCCEEEEEEeCChHHHHHhh
Confidence 998742100 00 000011 11223468899999999999999999998755 58899999999999999
Q ss_pred hcCc--------cccHHHHHHHHHHHHHHhhcCCeEEEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhcc
Q 041225 235 AKDS--------KRNDLIRHITQSHLSEYSSQGLRTLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECD 306 (658)
Q Consensus 235 ~~~~--------~~~~~~~~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~D 306 (658)
+... ..++..++.+.+.+++|+.+|+|||++|||.++.++...+ .+.. ...+ ...+|.|
T Consensus 568 ~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~r~l~~~~~~~~--~~~~---~~~~--------~~~~e~~ 634 (1053)
T TIGR01523 568 SSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRVLAFASKSFDKADNNDD--QLKN---ETLN--------RATAESD 634 (1053)
T ss_pred hHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeEEEEEEEECCchhccch--hhhc---cccc--------hhhhccC
Confidence 8532 2456678889999999999999999999999976543211 0000 0000 1236789
Q ss_pred ceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhc
Q 041225 307 LTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARY 386 (658)
Q Consensus 307 gTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~ 386 (658)
++|+|.++++|+++++++++|++|+++||++||+|||+..+|..+|+++|+...+.. .. ..
T Consensus 635 L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~--~~-~~---------------- 695 (1053)
T TIGR01523 635 LEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFI--HD-RD---------------- 695 (1053)
T ss_pred CEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcccc--cc-cc----------------
Confidence 999999999999999999999999999999999999999999999999999754210 00 00
Q ss_pred CcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCee
Q 041225 387 GVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVV 466 (658)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~ 466 (658)
......+++|.++.....+.+.+ ... ...
T Consensus 696 ---------------------------------------------~~~~~~vitG~~l~~l~~~~l~~----~~~--~~~ 724 (1053)
T TIGR01523 696 ---------------------------------------------EIMDSMVMTGSQFDALSDEEVDD----LKA--LCL 724 (1053)
T ss_pred ---------------------------------------------ccccceeeehHHhhhcCHHHHHH----Hhh--cCe
Confidence 00001345665554433322221 111 246
Q ss_pred EEEEcCcccHHHHHHHHHhcCCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhcccccccccchHHHHhh-hhhh
Q 041225 467 LCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLV-HGHW 545 (658)
Q Consensus 467 i~~~~~~~~K~~~v~~L~~~~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~-~gr~ 545 (658)
+++|++|.||..+|+.+++. ++.|+|+|||.||+|||+.||+||||+.++.+.++++||+++.++++.....++ |||.
T Consensus 725 V~ar~sP~~K~~iV~~lq~~-g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~vak~aADivl~dd~f~~I~~~i~~gR~ 803 (1053)
T TIGR01523 725 VIARCAPQTKVKMIEALHRR-KAFCAMTGDGVNDSPSLKMANVGIAMGINGSDVAKDASDIVLSDDNFASILNAIEEGRR 803 (1053)
T ss_pred EEEecCHHHHHHHHHHHHhc-CCeeEEeCCCcchHHHHHhCCccEecCCCccHHHHHhcCEEEecCCHHHHHHHHHHHHH
Confidence 89999999999999999998 689999999999999999999999994356666999999999998888777666 9999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc--cchhhHHHHHHHHHHhhhhhhhheecccCCChHHHhhCCcccc
Q 041225 546 NYQRIGYLVLYNFYRNAVFVLMLFWYILFTGFSTT--SALTDWSSVFYSLLYTSVPTIVVGIVDKDLSHKTLMQYPKLYV 623 (658)
Q Consensus 546 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~s~~--~~~~~~~~~~~n~~~~~~p~~~~~~~~~~~~~~~~~~~p~~y~ 623 (658)
+|+|+++++.|.++.|+..+++.+++.++..++|. .|+++++++|+|++++.+|+++++. .+.+++.+.+.|..+.
T Consensus 804 ~~~ni~k~i~y~l~~ni~~i~~~~~~~~~~~~~g~~~~Pl~~~qiL~inli~d~~palaL~~--e~~~~~~m~~~Pr~~~ 881 (1053)
T TIGR01523 804 MFDNIMKFVLHLLAENVAEAILLIIGLAFRDENGKSVFPLSPVEILWCIMITSCFPAMGLGL--EKAAPDLMDRLPHDNE 881 (1053)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccCCCcCchHHHHHHHHHHHHHHHHHHhhcc--CCCChhHHhcCCCCCC
Confidence 99999999999999999999999999988777665 5888999999999999999999987 3445666666666554
Q ss_pred cc
Q 041225 624 VQ 625 (658)
Q Consensus 624 ~~ 625 (658)
..
T Consensus 882 ~~ 883 (1053)
T TIGR01523 882 VG 883 (1053)
T ss_pred cc
Confidence 44
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-66 Score=539.48 Aligned_cols=473 Identities=25% Similarity=0.329 Sum_probs=368.4
Q ss_pred cccccCCCCCeeeeccCCcccccccceEEEeccCcccccceEEEEEEEEcCcccCCchhhHHHHHHHHHhhhcccccccc
Q 041225 16 KHMYDSSSGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCGKNYGNSLLLAQQVSAAAVRRWKLKSEISV 95 (658)
Q Consensus 16 ~~~~~~~~~~~i~vr~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (658)
++|+++ +.|||.+++||+||..++||+|||||||+|+|+|++.|+++..+.... +++...
T Consensus 414 kkMmkD----~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~~~----------------~~~~~l 473 (1034)
T KOG0204|consen 414 KKMMKD----NNLVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKVNS----------------PKSSNL 473 (1034)
T ss_pred HHHhcc----hhHHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeeccccccccC----------------cccccC
Confidence 456554 489999999999999999999999999999999999999887765211 000123
Q ss_pred ChHHHHHHhhccCcchhHHHHHHHHHHhhccceeecCCCCCCCCCCCCcccCCcceeeecCChhHHHHHHHHHHcCcEEE
Q 041225 96 DSKLMELLSKDLVGDERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYTLF 175 (658)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~ 175 (658)
++++.+ .++.+.+...+-....++ ..+...-+.++|+|.||+.|+..+|.++.
T Consensus 474 ~~~~~~---------------ll~~gI~~Nt~g~v~~~~------------~~g~~~~~~GspTE~AlL~f~~~LG~~~~ 526 (1034)
T KOG0204|consen 474 PPSLLD---------------LLLQGIAQNTTGSVVKPE------------KGGEQPEQLGSPTECALLGFGLKLGMDFQ 526 (1034)
T ss_pred CHHHHH---------------HHHHHHhhcCCCeEEecC------------CCCcCccccCCHHHHHHHHHHHHhCcchH
Confidence 333332 233444443332222211 11223334459999999999999998664
Q ss_pred EEcCCeEEEEeCCcEEEEEEEEeeCCCCCCCeeEEEEEcCCCcEEEEEeCCchHhHHhhhcCcc-------ccHHHHHHH
Q 041225 176 ERTSGHIVIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADSSMFNILAKDSK-------RNDLIRHIT 248 (658)
Q Consensus 176 ~~~~~~~~~~~~g~~~~~~il~~~~F~s~rk~msviv~~~~~~~~l~~KGa~e~i~~~~~~~~~-------~~~~~~~~~ 248 (658)
. .+.+.++++++||+|.||||+++++.+++..++|+|||+|.++..|+.... .++..+..+
T Consensus 527 ~------------~R~e~~v~kv~~FNS~kK~~gvvi~~~~~~~y~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~~~~ 594 (1034)
T KOG0204|consen 527 D------------VRPEEKVVKVYPFNSVKKRMGVVIKLPDGGHYVHWKGASEIVLKSCEYYIDSNGELVPFNEDDRKSF 594 (1034)
T ss_pred h------------hcchhheeEEeccCcccceeeEEEEcCCCCeEEEEcChHHHHHHhhhheECCCCCEeeCCHHHHHHH
Confidence 3 224567889999999999999999998877239999999999999987543 345566789
Q ss_pred HHHHHHHhhcCCeEEEEEEecCCHH--HHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccccCCChHHH
Q 041225 249 QSHLSEYSSQGLRTLVVASRDLADE--ELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEA 326 (658)
Q Consensus 249 ~~~~~~~~~~G~r~l~~a~k~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~l~~~~~~a 326 (658)
+..++.|+.+|+|++|+|||++... +.+.|.. ....+.|+|+++.+|++|++||++++|
T Consensus 595 ~~~Ie~mA~~~LRti~lAy~df~~~~~~~~~~~~-------------------~~~~~~~lt~laivGIkDPvRPgV~~A 655 (1034)
T KOG0204|consen 595 KDVIEPMASEGLRTICLAYRDFVAGPDEEPSWDN-------------------EELPEGGLTLLAIVGIKDPVRPGVPEA 655 (1034)
T ss_pred HHHHHHHHHhhhheeeEEeeccccCCCCCCCccc-------------------cccCCCCeEEEEEeeccCCCCCCcHHH
Confidence 9999999999999999999996443 1111211 112457899999999999999999999
Q ss_pred HHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHH
Q 041225 327 IEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEI 406 (658)
Q Consensus 327 I~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (658)
|+.|+++||.|.|+|||+..||++||.+|||..+++..+..+|.+
T Consensus 656 V~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d~~~lEG~e----------------------------------- 700 (1034)
T KOG0204|consen 656 VQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGDFLALEGKE----------------------------------- 700 (1034)
T ss_pred HHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCccceecchh-----------------------------------
Confidence 999999999999999999999999999999999877655555422
Q ss_pred HHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhc
Q 041225 407 EYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSR 486 (658)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~ 486 (658)
+.+.-++++.+.. .+..+.+|.+|.+|...|+.|+++
T Consensus 701 -------------------------------------Fr~~s~ee~~~i~------pkl~VlARSSP~DK~lLVk~L~~~ 737 (1034)
T KOG0204|consen 701 -------------------------------------FRELSQEERDKIW------PKLRVLARSSPNDKHLLVKGLIKQ 737 (1034)
T ss_pred -------------------------------------hhhcCHHHHHhhh------hhheeeecCCCchHHHHHHHHHhc
Confidence 1111111111100 124588999999999999999988
Q ss_pred CCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhcccccccccchHHHHhh-hhhhHHHHHHHHHHHHHHHHHHHH
Q 041225 487 TDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLV-HGHWNYQRIGYLVLYNFYRNAVFV 565 (658)
Q Consensus 487 ~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~-~gr~~~~~~~~~i~~~~~~~~~~~ 565 (658)
++.|++.|||.||.|+|+.||+|+||.-.+.+.||++||+|+.|++|.+++..+ +||..|.+++|+++|.+.-|+...
T Consensus 738 -g~VVAVTGDGTNDaPALkeADVGlAMGIaGTeVAKEaSDIIi~DDNFssIVk~v~WGR~VY~nIqKFiQFQLTVNVvAl 816 (1034)
T KOG0204|consen 738 -GEVVAVTGDGTNDAPALKEADVGLAMGIAGTEVAKEASDIIILDDNFSSIVKAVKWGRNVYDNIQKFLQFQLTVNVVAL 816 (1034)
T ss_pred -CcEEEEecCCCCCchhhhhcccchhccccchhhhhhhCCeEEEcCchHHHHHHHHhhhHHHHHHHHhheeEEEEEEEee
Confidence 789999999999999999999999995555566999999999999999999876 999999999999999999999999
Q ss_pred HHHHHHHHhhccccccchhhHHHHHHHHHHhhhhhhhheecccCCChHHHhhCCccccc---cccchH-----HHHHHHH
Q 041225 566 LMLFWYILFTGFSTTSALTDWSSVFYSLLYTSVPTIVVGIVDKDLSHKTLMQYPKLYVV---QQYLWP-----SDIQIAR 637 (658)
Q Consensus 566 ~~~~~~~~~~~~s~~~~~~~~~~~~~n~~~~~~p~~~~~~~~~~~~~~~~~~~p~~y~~---~~~~~~-----~~~~~~~ 637 (658)
++.|..... ++.+|+.+.|++|.|++++.+.++++|. ++..++.+.+.|.=-.. ....|+ ++||+++
T Consensus 817 iv~fv~A~~---~~dsPLtAVQlLWVNLIMDTLgALALAT--epPt~~Lm~RkP~GR~~~LIt~tMwknil~qa~YQl~v 891 (1034)
T KOG0204|consen 817 IVNFVSACA---TGDSPLTAVQLLWVNLIMDTLGALALAT--EPPTDELMKRKPVGRTKPLITRTMWKNILGQAVYQLIV 891 (1034)
T ss_pred hhhhhhhhh---cCCccHHHHHHHHHHHHHHHHHHHHhcc--CCCChHHhcCCCCCCCCcchHHHHHHHHHHHHHHHHHH
Confidence 888888777 6779999999999999999999999975 33455566677732222 124554 5899999
Q ss_pred HHHHHhhcccccc
Q 041225 638 EAEVLRKGSNYLA 650 (658)
Q Consensus 638 ~~~~~~~~~~~~~ 650 (658)
...+...|-..+.
T Consensus 892 l~iL~F~G~~if~ 904 (1034)
T KOG0204|consen 892 LFILNFAGKSIFG 904 (1034)
T ss_pred HHHHHhcchhhhc
Confidence 9999998888773
|
|
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-63 Score=573.20 Aligned_cols=481 Identities=23% Similarity=0.287 Sum_probs=352.1
Q ss_pred CCCeeeeccCCcccccccceEEEeccCcccccceEEEEEEEEcCcccCCchhhHHHHHHHHHhhhccccccccChHHHHH
Q 041225 23 SGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCGKNYGNSLLLAQQVSAAAVRRWKLKSEISVDSKLMEL 102 (658)
Q Consensus 23 ~~~~i~vr~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (658)
.+++++||+++++|+||++++||||||||||+|+|+|.+++..+..+.... ... .....+.+.+....+.
T Consensus 271 ~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~----- 340 (917)
T TIGR01116 271 AKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSLN-EFC----VTGTTYAPEGGVIKDD----- 340 (917)
T ss_pred HHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCcccccc-eEE----ecCCccCCCccccccC-----
Confidence 346899999999999999999999999999999999999998764321100 000 0000011100000000
Q ss_pred HhhccCcchhHHHHHHHHHHhhccceeecCCCCCCCCCCCCcccCCcceeeecCChhHHHHHHHHHHcCcEEEEEcCCeE
Q 041225 103 LSKDLVGDERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYTLFERTSGHI 182 (658)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~~ 182 (658)
.............++.++++||++....++. .+.++.. ++|+|.||++++.+.|+..........
T Consensus 341 --~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~------------~~~~~~~-gdp~E~ALl~~~~~~g~~~~~~~~~~~ 405 (917)
T TIGR01116 341 --GPVAGGQDAGLEELATIAALCNDSSLDFNER------------KGVYEKV-GEATEAALKVLVEKMGLPATKNGVSSK 405 (917)
T ss_pred --CcccccchHHHHHHHHHHHhcCCCeeecccc------------CCceeec-cChhHHHHHHHHHHcCCCchhcccccc
Confidence 0000011234567888999999876542221 0112223 499999999999999987654433322
Q ss_pred EEEeCC----cEEEEEEEEeeCCCCCCCeeEEEEEcCCCcEEEEEeCCchHhHHhhhcCc-------cccHHHHHHHHHH
Q 041225 183 VIDING----EGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADSSMFNILAKDS-------KRNDLIRHITQSH 251 (658)
Q Consensus 183 ~~~~~g----~~~~~~il~~~~F~s~rk~msviv~~~~~~~~l~~KGa~e~i~~~~~~~~-------~~~~~~~~~~~~~ 251 (658)
.....| ....+++++.+||+|+|||||++++.. +.+.+|+|||||.|+++|++.. +.++..++.+.++
T Consensus 406 ~~~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~~-~~~~~~~KGApe~il~~c~~~~~~~g~~~~l~~~~~~~i~~~ 484 (917)
T TIGR01116 406 RRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKPS-TGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKNTILSV 484 (917)
T ss_pred cccccchhHHHHhhcceeeecccChhhCeEEEEEeeC-CcEEEEEcCChHHHHHhccceecCCCCeeeCCHHHHHHHHHH
Confidence 222222 124578999999999999999999964 6688999999999999997532 2345678889999
Q ss_pred HHHHhh-cCCeEEEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccccCCChHHHHHHH
Q 041225 252 LSEYSS-QGLRTLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEAL 330 (658)
Q Consensus 252 ~~~~~~-~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l 330 (658)
+++|+. +|+||+++|||.++.++... . ..+. .....++.|++|+|.++++|+++++++++|++|
T Consensus 485 ~~~~a~~~GlRvl~~A~k~~~~~~~~~-~---------~~~~-----~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l 549 (917)
T TIGR01116 485 IKEMGTTKALRCLALAFKDIPDPREED-L---------LSDP-----ANFEAIESDLTFIGVVGMLDPPRPEVADAIEKC 549 (917)
T ss_pred HHHHHhhcCCeEEEEEEEECCcccccc-c---------cccc-----hhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHH
Confidence 999999 99999999999987643110 0 0000 112346789999999999999999999999999
Q ss_pred HhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHH
Q 041225 331 RQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLA 410 (658)
Q Consensus 331 ~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (658)
+++||+++|+|||+..+|..+|+++|+..++..+..
T Consensus 550 ~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~~-------------------------------------------- 585 (917)
T TIGR01116 550 RTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTF-------------------------------------------- 585 (917)
T ss_pred HHCCCEEEEecCCCHHHHHHHHHHcCCCCCCccccc--------------------------------------------
Confidence 999999999999999999999999999765432110
Q ss_pred hhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhcCCCe
Q 041225 411 ISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDM 490 (658)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~~~~~ 490 (658)
..++|.++.....+.. .. ...+..+++|++|.+|..+++.+++. ++.
T Consensus 586 --------------------------~~~~g~~l~~~~~~~~----~~--~~~~~~v~ar~~P~~K~~iV~~lq~~-g~~ 632 (917)
T TIGR01116 586 --------------------------KSFTGREFDEMGPAKQ----RA--ACRSAVLFSRVEPSHKSELVELLQEQ-GEI 632 (917)
T ss_pred --------------------------eeeeHHHHhhCCHHHH----HH--hhhcCeEEEecCHHHHHHHHHHHHhc-CCe
Confidence 0111111111100000 01 11235799999999999999999976 689
Q ss_pred EEEEcCCcCChhhhhhcceeEEecCccchhhhhhcccccccccchHHHHhh-hhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 041225 491 TLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLV-HGHWNYQRIGYLVLYNFYRNAVFVLMLF 569 (658)
Q Consensus 491 v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~-~gr~~~~~~~~~i~~~~~~~~~~~~~~~ 569 (658)
|+|+|||.||++||+.||+|||| +++.+.++++||+++.++++...+.++ |||.+|+|+++++.|.+++|+..+++++
T Consensus 633 va~iGDG~ND~~alk~AdVGia~-g~g~~~ak~aAD~vl~dd~f~~i~~~i~~GR~~~~ni~k~i~~~l~~ni~~~~~~~ 711 (917)
T TIGR01116 633 VAMTGDGVNDAPALKKADIGIAM-GSGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNIGEVVCIF 711 (917)
T ss_pred EEEecCCcchHHHHHhCCeeEEC-CCCcHHHHHhcCeEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 99999999999999999999999 466666899999999997776666544 9999999999999999999999999999
Q ss_pred HHHHhhccccccchhhHHHHHHHHHHhhhhhhhheecccCCChHHHhhCCcccccccc
Q 041225 570 WYILFTGFSTTSALTDWSSVFYSLLYTSVPTIVVGIVDKDLSHKTLMQYPKLYVVQQY 627 (658)
Q Consensus 570 ~~~~~~~~s~~~~~~~~~~~~~n~~~~~~p~~~~~~~~~~~~~~~~~~~p~~y~~~~~ 627 (658)
++.++ ..+.|+++++++|+|++++.+|+++++.... +++.+.+.|..+...-.
T Consensus 712 ~~~~~---~~~~pl~~~qll~inli~d~lp~~~l~~~~~--~~~~m~~pP~~~~~~l~ 764 (917)
T TIGR01116 712 LTAAL---GIPEGLIPVQLLWVNLVTDGLPATALGFNPP--DKDIMWKPPRRPDEPLI 764 (917)
T ss_pred HHHHH---cCCchHHHHHHHHHHHHHHHHHHHHHhcCCc--chhHhcCCCCCCCCCcc
Confidence 88776 3457999999999999999999999987544 46666677766655433
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-62 Score=569.21 Aligned_cols=477 Identities=19% Similarity=0.214 Sum_probs=355.9
Q ss_pred CCCeeeeccCCcccccccceEEEeccCcccccceEEEEEEEEcCcccCCchhhHHHHHHHHHhhhccccccccChHHHHH
Q 041225 23 SGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCGKNYGNSLLLAQQVSAAAVRRWKLKSEISVDSKLMEL 102 (658)
Q Consensus 23 ~~~~i~vr~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (658)
.+++++||+++++|+||++++||||||||||+|+|+|.++++++..+..+... .....
T Consensus 326 ~~~~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~------------~~~~~---------- 383 (997)
T TIGR01106 326 ARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTE------------DQSGV---------- 383 (997)
T ss_pred HHCCcEecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCcc------------CCCCc----------
Confidence 46689999999999999999999999999999999999999887655321100 00000
Q ss_pred HhhccCcchhHHHHHHHHHHhhccceeecCCCCCCCCCCCCcccCCcceeeecCChhHHHHHHHHHHcCcEEEEEcCCeE
Q 041225 103 LSKDLVGDERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYTLFERTSGHI 182 (658)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~~ 182 (658)
.........+.++.++++||++.+..+.... .... .+..++|+|.||++++...+...
T Consensus 384 ----~~~~~~~~~~~ll~~~alcn~~~~~~~~~~~---------~~~~-~~~~gdp~E~ALl~~a~~~~~~~-------- 441 (997)
T TIGR01106 384 ----SFDKSSATWLALSRIAGLCNRAVFKAGQENV---------PILK-RAVAGDASESALLKCIELCLGSV-------- 441 (997)
T ss_pred ----cCCcccHHHHHHHHHHHHcCCCeeccccCCC---------cccc-cccCcChHHHHHHHHHHHhCCCH--------
Confidence 0011112345678899999987654221100 0001 13345999999999998654321
Q ss_pred EEEeCCcEEEEEEEEeeCCCCCCCeeEEEEEcC---CCcEEEEEeCCchHhHHhhhcCc------cccHHHHHHHHHHHH
Q 041225 183 VIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFP---DNSVKVLVKGADSSMFNILAKDS------KRNDLIRHITQSHLS 253 (658)
Q Consensus 183 ~~~~~g~~~~~~il~~~~F~s~rk~msviv~~~---~~~~~l~~KGa~e~i~~~~~~~~------~~~~~~~~~~~~~~~ 253 (658)
.+....+++++.+||+|+||||+++++.. ++.+++|+|||||.|+++|+... ..++..++.+.+.++
T Consensus 442 ----~~~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~KGApe~Il~~c~~~~~~g~~~~l~~~~~~~~~~~~~ 517 (997)
T TIGR01106 442 ----MEMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILERCSSILIHGKEQPLDEELKEAFQNAYL 517 (997)
T ss_pred ----HHHHhhCceeEEeccCCCCceEEEEEeccCCCCceEEEEEeCChHHHHHHhhHHhcCCCcccCCHHHHHHHHHHHH
Confidence 11233567788999999999999998743 24688999999999999997531 235667888999999
Q ss_pred HHhhcCCeEEEEEEecCCHHHHHH-HHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccccCCChHHHHHHHHh
Q 041225 254 EYSSQGLRTLVVASRDLADEELKQ-WQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQ 332 (658)
Q Consensus 254 ~~~~~G~r~l~~a~k~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~ 332 (658)
+++.+|+||+++|||.++.++++. |... .+ .....+.|++|+|.++++|+++++++++|++|++
T Consensus 518 ~~a~~GlRvla~A~k~l~~~~~~~~~~~~----------~~-----~~~~~e~~L~flGli~i~Dplr~~v~~aI~~l~~ 582 (997)
T TIGR01106 518 ELGGLGERVLGFCHLYLPDEQFPEGFQFD----------TD-----DVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCRS 582 (997)
T ss_pred HHHhcCCEEEEEEEeecCccccccccccc----------ch-----hhhccccCcEEEEEEeccCCChHHHHHHHHHHHH
Confidence 999999999999999997654321 1100 00 0123478999999999999999999999999999
Q ss_pred cCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhh
Q 041225 333 AGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAIS 412 (658)
Q Consensus 333 ~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (658)
+||+++|+|||++.+|.++|+++|++..+... .+++.+ .....
T Consensus 583 ~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~-------~~~i~~-------~~~~~----------------------- 625 (997)
T TIGR01106 583 AGIKVIMVTGDHPITAKAIAKGVGIISEGNET-------VEDIAA-------RLNIP----------------------- 625 (997)
T ss_pred CCCeEEEECCCCHHHHHHHHHHcCCCCCCccc-------hhhhhh-------hcccc-----------------------
Confidence 99999999999999999999999998654321 000000 00000
Q ss_pred cCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhcCCCeEE
Q 041225 413 NDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTL 492 (658)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~~~~~v~ 492 (658)
... .........+++|.++.....+++ ...+..+...|++|++|.||..+|+.+++. ++.|+
T Consensus 626 ----~~~---------~~~~~~~~~vi~G~~l~~l~~~el----~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~-g~vv~ 687 (997)
T TIGR01106 626 ----VSQ---------VNPRDAKACVVHGSDLKDMTSEQL----DEILKYHTEIVFARTSPQQKLIIVEGCQRQ-GAIVA 687 (997)
T ss_pred ----ccc---------cccccccceEEEhHHhhhCCHHHH----HHHHHhcCCEEEEECCHHHHHHHHHHHHHC-CCEEE
Confidence 000 000011125677777765544332 233333345699999999999999999987 67999
Q ss_pred EEcCCcCChhhhhhcceeEEecCccchhhhhhcccccccccchHHHHhh-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 041225 493 AIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLV-HGHWNYQRIGYLVLYNFYRNAVFVLMLFWY 571 (658)
Q Consensus 493 aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~-~gr~~~~~~~~~i~~~~~~~~~~~~~~~~~ 571 (658)
|+|||.||+|||+.||+||||+.++.+.++++||+++.++++...+.++ |||.+|.|+++++.|.++.|+..+++.+++
T Consensus 688 ~~GDG~ND~paLk~AdVGiamg~~G~~vak~aADivL~dd~f~~Iv~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~ 767 (997)
T TIGR01106 688 VTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIF 767 (997)
T ss_pred EECCCcccHHHHhhCCcceecCCcccHHHHHhhceEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 9999999999999999999994355556899999999999998888665 999999999999999999999999999998
Q ss_pred HHhhccccccchhhHHHHHHHHHHhhhhhhhheecccCCChHHHhhCCccc
Q 041225 572 ILFTGFSTTSALTDWSSVFYSLLYTSVPTIVVGIVDKDLSHKTLMQYPKLY 622 (658)
Q Consensus 572 ~~~~~~s~~~~~~~~~~~~~n~~~~~~p~~~~~~~~~~~~~~~~~~~p~~y 622 (658)
.++ ..+.|+++++++|+|++++.+|+++++. .+.+++.+.+.|.-.
T Consensus 768 ~~~---~~~~pl~~~qlL~inli~d~lp~~al~~--e~~~~~~m~~~P~~~ 813 (997)
T TIGR01106 768 IIA---NIPLPLGTITILCIDLGTDMVPAISLAY--EKAESDIMKRQPRNP 813 (997)
T ss_pred HHH---cCcchhHHHHHHHHHHHHHHHHHHHHhc--CCCCcccccCCCcCC
Confidence 887 4557899999999999999999999987 445666777777643
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-61 Score=556.65 Aligned_cols=434 Identities=25% Similarity=0.321 Sum_probs=335.9
Q ss_pred CCCeeeeccCCcccccccceEEEeccCcccccceEEEEEEEEcCcccCCchhhHHHHHHHHHhhhccccccccChHHHHH
Q 041225 23 SGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCGKNYGNSLLLAQQVSAAAVRRWKLKSEISVDSKLMEL 102 (658)
Q Consensus 23 ~~~~i~vr~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (658)
.+++++||+++++|+||++++||||||||||+|+|+|.+++..+..+.... ..
T Consensus 358 ak~~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~-------------------------~~-- 410 (941)
T TIGR01517 358 MKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRD-------------------------VL-- 410 (941)
T ss_pred HhCCCEEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEecCc-------------------------cc--
Confidence 467899999999999999999999999999999999999987664332110 00
Q ss_pred HhhccCcchhHHHHHHHHHHhhccceeecCCCCCCCCCCCCcccCCcceeeecCChhHHHHHHHHHHcCcEEEEEcCCeE
Q 041225 103 LSKDLVGDERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYTLFERTSGHI 182 (658)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~~ 182 (658)
...+....+++...++||+..+...+ . ....+..++|+|.|+++++...|.....
T Consensus 411 ------~~~~~~~~~~l~~~~~~~s~~~~~~~------------~-~~~~~~~g~p~e~All~~~~~~~~~~~~------ 465 (941)
T TIGR01517 411 ------RNVPKHVRNILVEGISLNSSSEEVVD------------R-GGKRAFIGSKTECALLGFLLLLGRDYQE------ 465 (941)
T ss_pred ------ccCCHHHHHHHHHHHHhCCCCccccC------------C-CCccccCCCccHHHHHHHHHHcCCCHHH------
Confidence 00011234455555566544332110 0 1112345699999999999887643210
Q ss_pred EEEeCCcEEEEEEEEeeCCCCCCCeeEEEEEcCCCcEEEEEeCCchHhHHhhhcCc-------cccHHHHHHHHHHHHHH
Q 041225 183 VIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADSSMFNILAKDS-------KRNDLIRHITQSHLSEY 255 (658)
Q Consensus 183 ~~~~~g~~~~~~il~~~~F~s~rk~msviv~~~~~~~~l~~KGa~e~i~~~~~~~~-------~~~~~~~~~~~~~~~~~ 255 (658)
....+++++.+||+|+||||+++++.+++.+++|+|||||.|+++|+... ..++ .++.+.+.++++
T Consensus 466 ------~~~~~~~~~~~pF~s~~k~msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~~~g~~~~~~~-~~~~i~~~~~~~ 538 (941)
T TIGR01517 466 ------VRAEEKVVKIYPFNSERKFMSVVVKHSGGKVREFRKGASEIVLKPCRKRLDSNGEATPISD-DKDRCADVIEPL 538 (941)
T ss_pred ------HHhhchhccccccCCCCCeEEEEEEeCCCcEEEEEECChHHHHHhhhHHhhcCCCcccCcH-HHHHHHHHHHHH
Confidence 11245678899999999999999998888899999999999999997531 1223 567888999999
Q ss_pred hhcCCeEEEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccccCCChHHHHHHHHhcCC
Q 041225 256 SSQGLRTLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGI 335 (658)
Q Consensus 256 ~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI 335 (658)
+.+|+|++++|||.++.++.+.| ...|.|++++|.++++|++|++++++|++|+++||
T Consensus 539 a~~G~Rvl~~A~~~~~~~~~~~~----------------------~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI 596 (941)
T TIGR01517 539 ASDALRTICLAYRDFAPEEFPRK----------------------DYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGI 596 (941)
T ss_pred HhcCCEEEEEEEEecCccccccc----------------------cccccCcEEEEEeeccCCCchhHHHHHHHHHHCCC
Confidence 99999999999999875543211 01357899999999999999999999999999999
Q ss_pred eEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCC
Q 041225 336 KVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDA 415 (658)
Q Consensus 336 ~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (658)
+++|+|||+..+|..+|+++|+...+..+
T Consensus 597 ~v~miTGD~~~tA~~iA~~~GI~~~~~~v--------------------------------------------------- 625 (941)
T TIGR01517 597 TVRMVTGDNIDTAKAIARNCGILTFGGLA--------------------------------------------------- 625 (941)
T ss_pred EEEEECCCChHHHHHHHHHcCCCCCCceE---------------------------------------------------
Confidence 99999999999999999999997654322
Q ss_pred CCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhcCCCeEEEEc
Q 041225 416 KFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIG 495 (658)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~~~~~v~aiG 495 (658)
++|+++.....+++.. ++. +..+++|++|.||..+|+.+++. ++.|+|+|
T Consensus 626 -----------------------i~G~~~~~l~~~el~~----~i~--~~~Vfar~sPe~K~~iV~~lq~~-g~vVam~G 675 (941)
T TIGR01517 626 -----------------------MEGKEFRRLVYEEMDP----ILP--KLRVLARSSPLDKQLLVLMLKDM-GEVVAVTG 675 (941)
T ss_pred -----------------------eeHHHhhhCCHHHHHH----Hhc--cCeEEEECCHHHHHHHHHHHHHC-CCEEEEEC
Confidence 1222221111111111 111 24689999999999999999997 67999999
Q ss_pred CCcCChhhhhhcceeEEecCccchhhhhhcccccccccchHHHHhh-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 041225 496 DGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLV-HGHWNYQRIGYLVLYNFYRNAVFVLMLFWYILF 574 (658)
Q Consensus 496 Dg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~-~gr~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 574 (658)
||.||+|||+.||+||||+.++.+.++++||+++.++++.....++ +||.+|.|+++++.|.+++|++.+++.+++.++
T Consensus 676 DGvNDapALk~AdVGIAmg~~gtdvAk~aADivL~dd~f~~I~~~i~~gR~~~~ni~k~i~~~l~~n~~~i~~~~~~~~~ 755 (941)
T TIGR01517 676 DGTNDAPALKLADVGFSMGISGTEVAKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAVILTFVGSCI 755 (941)
T ss_pred CCCchHHHHHhCCcceecCCCccHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999994366667999999999999988888666 999999999999999999999999998888777
Q ss_pred hccccccchhhHHHHHHHHHHhhhhhhhheecccCCChHHHhhCCccccc
Q 041225 575 TGFSTTSALTDWSSVFYSLLYTSVPTIVVGIVDKDLSHKTLMQYPKLYVV 624 (658)
Q Consensus 575 ~~~s~~~~~~~~~~~~~n~~~~~~p~~~~~~~~~~~~~~~~~~~p~~y~~ 624 (658)
. ++.|+++++++|+|++++.+|+++++. +.+.+.+++.|..++.
T Consensus 756 ~---~~~pl~~~qil~inl~~d~~~al~l~~---e~~~~~lm~~~P~~~~ 799 (941)
T TIGR01517 756 S---STSPLTAVQLLWVNLIMDTLAALALAT---EPPTEALLDRKPIGRN 799 (941)
T ss_pred h---ccccHHHHHHHHHHHHHHHhhHHHHcc---CCccHHHHhCCCCCCC
Confidence 4 467999999999999999999999973 3455666766666544
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-59 Score=542.16 Aligned_cols=485 Identities=23% Similarity=0.292 Sum_probs=339.9
Q ss_pred CCCeeeeccCCcccccccceEEEeccCcccccceEEEEEEEEcCcccCCchhhHHHHHHHHHhhhccccccccChHHHHH
Q 041225 23 SGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCGKNYGNSLLLAQQVSAAAVRRWKLKSEISVDSKLMEL 102 (658)
Q Consensus 23 ~~~~i~vr~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (658)
.+++|+||++.++|+||+|+++|||||||||+|+|+|.+++..+....... . ..
T Consensus 430 ~k~~il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~~------------------~--~~------ 483 (1054)
T TIGR01657 430 KKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFLK------------------I--VT------ 483 (1054)
T ss_pred HHCCEEEcCcccceecceeeEEEEcCCCCCccCCeeEEeEecccCcccccc------------------c--cc------
Confidence 467899999999999999999999999999999999999986543111000 0 00
Q ss_pred HhhccCcchhHHHHHHHHHHhhccceeecCCCCCCCCCCCCcccCCcceeeecCChhHHHHHHHHHHcCcEEEEEcCCe-
Q 041225 103 LSKDLVGDERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYTLFERTSGH- 181 (658)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~- 181 (658)
.........++.++++||++.... + +. .++|.|.|+++++ |+.+.......
T Consensus 484 ------~~~~~~~~~~~~~~a~C~~~~~~~----------------~--~~-~Gdp~E~al~~~~---~~~~~~~~~~~~ 535 (1054)
T TIGR01657 484 ------EDSSLKPSITHKALATCHSLTKLE----------------G--KL-VGDPLDKKMFEAT---GWTLEEDDESAE 535 (1054)
T ss_pred ------cccccCchHHHHHHHhCCeeEEEC----------------C--EE-ecCHHHHHHHHhC---CCEEECCCCccc
Confidence 000012234667899999886531 1 22 3599999999975 55543211100
Q ss_pred -----EEEEeCCcEEEEEEEEeeCCCCCCCeeEEEEEcCC-CcEEEEEeCCchHhHHhhhcCccccHHHHHHHHHHHHHH
Q 041225 182 -----IVIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPD-NSVKVLVKGADSSMFNILAKDSKRNDLIRHITQSHLSEY 255 (658)
Q Consensus 182 -----~~~~~~g~~~~~~il~~~~F~s~rk~msviv~~~~-~~~~l~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (658)
..+...+....+++++.+||+|++||||||++.++ +.+++|+|||||.|+++|++.. .++.+.+.++++
T Consensus 536 ~~~~~~~i~~~~~~~~~~il~~~pF~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~~~-----~p~~~~~~~~~~ 610 (1054)
T TIGR01657 536 PTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSPET-----VPSDYQEVLKSY 610 (1054)
T ss_pred ccccccceeccCCCceEEEEEEEeecCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCCcC-----CChhHHHHHHHH
Confidence 00111222357899999999999999999999865 5678999999999999999642 467788899999
Q ss_pred hhcCCeEEEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccccCCChHHHHHHHHhcCC
Q 041225 256 SSQGLRTLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGI 335 (658)
Q Consensus 256 ~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI 335 (658)
+.+|+|||++|||.+++.+..++.+ .....+|.|++|+|.++++|+++++++++|++|+++||
T Consensus 611 a~~G~RVLalA~k~l~~~~~~~~~~-----------------~~r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi 673 (1054)
T TIGR01657 611 TREGYRVLALAYKELPKLTLQKAQD-----------------LSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASI 673 (1054)
T ss_pred HhcCCEEEEEEEeecCccchhhhhh-----------------ccHHHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCC
Confidence 9999999999999997433222111 01124678999999999999999999999999999999
Q ss_pred eEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCC
Q 041225 336 KVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDA 415 (658)
Q Consensus 336 ~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (658)
+++|+|||++.||..+|+++|++.+++.++..+..+.+... .....+...+.... ....
T Consensus 674 ~v~miTGD~~~TA~~iA~~~gii~~~~~vi~~~~~~~~~~~----------------~~~~~~~~~~~~~~-----~~~~ 732 (1054)
T TIGR01657 674 RTVMITGDNPLTAVHVARECGIVNPSNTLILAEAEPPESGK----------------PNQIKFEVIDSIPF-----ASTQ 732 (1054)
T ss_pred eEEEECCCCHHHHHHHHHHcCCCCCCceEEEeecccccCCC----------------CceEEEEecCcccc-----cccc
Confidence 99999999999999999999999876665554321100000 00000000000000 0000
Q ss_pred CCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhcCCCeEEEEc
Q 041225 416 KFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIG 495 (658)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~~~~~v~aiG 495 (658)
.....................++++|+++....+. ..+.+..++.. ..|++|++|.||..+|+.+++. ++.|+|+|
T Consensus 733 ~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~~~-~~~~l~~~~~~--~~VfAR~sP~qK~~iV~~lq~~-g~~V~m~G 808 (1054)
T TIGR01657 733 VEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQAH-SPELLLRLLSH--TTVFARMAPDQKETLVELLQKL-DYTVGMCG 808 (1054)
T ss_pred ccccCcccccchhhhcccceEEEEEcHHHHHHHHh-hHHHHHHHHhc--CeEEEecCHHHHHHHHHHHHhC-CCeEEEEe
Confidence 00000000000001112234578889887664321 11223333333 4599999999999999999998 68999999
Q ss_pred CCcCChhhhhhcceeEEecCccchhhhhhcccccccccchHHHHhh-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 041225 496 DGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLV-HGHWNYQRIGYLVLYNFYRNAVFVLMLFWYILF 574 (658)
Q Consensus 496 Dg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~-~gr~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 574 (658)
||.||++|||.||+||||++++ |..+||+++.+.++.....++ +||.++.++.+++.|.+..++...+..++..+
T Consensus 809 DG~ND~~ALK~AdVGIam~~~d---as~AA~f~l~~~~~~~I~~~I~eGR~~l~~~~~~~~~~~~~~~~~~~~~~~l~~- 884 (1054)
T TIGR01657 809 DGANDCGALKQADVGISLSEAE---ASVAAPFTSKLASISCVPNVIREGRCALVTSFQMFKYMALYSLIQFYSVSILYL- 884 (1054)
T ss_pred CChHHHHHHHhcCcceeecccc---ceeecccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 9999999999999999995443 668999999999998888776 99999999999999988888766555433222
Q ss_pred hccccccchhhHHHHHHHHHHhhhhhhhheecccCCChHHHhhCC
Q 041225 575 TGFSTTSALTDWSSVFYSLLYTSVPTIVVGIVDKDLSHKTLMQYP 619 (658)
Q Consensus 575 ~~~s~~~~~~~~~~~~~n~~~~~~p~~~~~~~~~~~~~~~~~~~p 619 (658)
...+++++|++|+|++++.+|+++++.. .+.+.+++.|
T Consensus 885 ----~~~~l~~~Q~l~i~li~~~~~~l~l~~~---~p~~~l~~~~ 922 (1054)
T TIGR01657 885 ----IGSNLGDGQFLTIDLLLIFPVALLMSRN---KPLKKLSKER 922 (1054)
T ss_pred ----ccCcCccHHHHHHHHHHHHHHHHHHHcC---CchhhcCCCC
Confidence 2367889999999999999999999642 2344455444
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-57 Score=521.69 Aligned_cols=446 Identities=24% Similarity=0.312 Sum_probs=336.8
Q ss_pred CCCeeeeccCCcccccccceEEEeccCcccccceEEEEEEEEcCcccCCchhhHHHHHHHHHhhhccccccccChHHHHH
Q 041225 23 SGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCGKNYGNSLLLAQQVSAAAVRRWKLKSEISVDSKLMEL 102 (658)
Q Consensus 23 ~~~~i~vr~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (658)
.+++++||+++++|+||++++||||||||||+|+|+|.+++..+..+.... ...+.+.++...+.+.
T Consensus 306 ak~~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~----------~~~~~~~~~~~~~~~~--- 372 (884)
T TIGR01522 306 SKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLN----------AVSLNQFGEVIVDGDV--- 372 (884)
T ss_pred hhcCCcccchHHHHhccCccEEEecCccccccCeEEEEEEEecCceEeecc----------CCccCCCCcccccccc---
Confidence 567899999999999999999999999999999999999987654321000 0000000010000000
Q ss_pred HhhccCcchhHHHHHHHHHHhhccceeecCCCCCCCCCCCCcccCCcceeeecCChhHHHHHHHHHHcCcEEEEEcCCeE
Q 041225 103 LSKDLVGDERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYTLFERTSGHI 182 (658)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~~ 182 (658)
.....++...+++.+.++||+......+ + .. .++|+|.|+++++...|+..
T Consensus 373 ----~~~~~~~~~~~~l~~~~l~~~~~~~~~~--------------~--~~-~g~p~e~All~~~~~~~~~~-------- 423 (884)
T TIGR01522 373 ----LHGFYTVAVSRILEAGNLCNNAKFRNEA--------------D--TL-LGNPTDVALIELLMKFGLDD-------- 423 (884)
T ss_pred ----cccccCHHHHHHHHHHhhhCCCeecCCC--------------C--Cc-CCChHHHHHHHHHHHcCcHh--------
Confidence 0011123456788889999987542111 1 11 24899999999999877531
Q ss_pred EEEeCCcEEEEEEEEeeCCCCCCCeeEEEEEcC-CCcEEEEEeCCchHhHHhhhcCcc-------ccHHHHHHHHHHHHH
Q 041225 183 VIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFP-DNSVKVLVKGADSSMFNILAKDSK-------RNDLIRHITQSHLSE 254 (658)
Q Consensus 183 ~~~~~g~~~~~~il~~~~F~s~rk~msviv~~~-~~~~~l~~KGa~e~i~~~~~~~~~-------~~~~~~~~~~~~~~~ 254 (658)
....++.++.+||+|.||||+++++.+ ++.+++|+|||||.|+..|+.... .++..++.+.+.+++
T Consensus 424 ------~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~ 497 (884)
T TIGR01522 424 ------LRETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQEEAAE 497 (884)
T ss_pred ------HHhhCcEEeEeCCCCCCCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhhhhhcCCCeeeCCHHHHHHHHHHHHH
Confidence 112356778999999999999999875 467899999999999999975321 245567788889999
Q ss_pred HhhcCCeEEEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccccCCChHHHHHHHHhcC
Q 041225 255 YSSQGLRTLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAG 334 (658)
Q Consensus 255 ~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~G 334 (658)
++.+|+|++++|||.+ +.|++++|.++++|+++++++++|++|+++|
T Consensus 498 ~a~~G~rvl~~A~~~~---------------------------------~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~G 544 (884)
T TIGR01522 498 MASAGLRVIAFASGPE---------------------------------KGQLTFLGLVGINDPPRPGVKEAVTTLITGG 544 (884)
T ss_pred HHhcCCEEEEEEEEcC---------------------------------CCCeEEEEEEeccCcchhHHHHHHHHHHHCC
Confidence 9999999999999975 2478999999999999999999999999999
Q ss_pred CeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcC
Q 041225 335 IKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISND 414 (658)
Q Consensus 335 I~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (658)
++++|+|||+..+|..+|+++|+......++
T Consensus 545 i~v~miTGD~~~tA~~ia~~~Gi~~~~~~~v------------------------------------------------- 575 (884)
T TIGR01522 545 VRIIMITGDSQETAVSIARRLGMPSKTSQSV------------------------------------------------- 575 (884)
T ss_pred CeEEEECCCCHHHHHHHHHHcCCCCCCCcee-------------------------------------------------
Confidence 9999999999999999999999976533221
Q ss_pred CCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhcCCCeEEEE
Q 041225 415 AKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAI 494 (658)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~~~~~v~ai 494 (658)
+|.++...-.+++. .++. +..+++|++|.+|..+++.+++. ++.|+|+
T Consensus 576 -------------------------~g~~l~~~~~~~l~----~~~~--~~~Vfar~~P~~K~~iv~~lq~~-g~~v~mv 623 (884)
T TIGR01522 576 -------------------------SGEKLDAMDDQQLS----QIVP--KVAVFARASPEHKMKIVKALQKR-GDVVAMT 623 (884)
T ss_pred -------------------------EhHHhHhCCHHHHH----HHhh--cCeEEEECCHHHHHHHHHHHHHC-CCEEEEE
Confidence 11111110001111 1111 25689999999999999999987 6899999
Q ss_pred cCCcCChhhhhhcceeEEecCccchhhhhhcccccccccchHHHHhh-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 041225 495 GDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLV-HGHWNYQRIGYLVLYNFYRNAVFVLMLFWYIL 573 (658)
Q Consensus 495 GDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~-~gr~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 573 (658)
|||.||+|||+.||+||||+.++.+.++++||+++.++++.....++ +||.+|+|+++++.|.+..|+..+++.+++.+
T Consensus 624 GDGvND~pAl~~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~i~~gR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~ 703 (884)
T TIGR01522 624 GDGVNDAPALKLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSVAALSLIALATL 703 (884)
T ss_pred CCCcccHHHHHhCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 99999999999999999994345666889999999999988888766 99999999999999999999998877776666
Q ss_pred hhccccccchhhHHHHHHHHHHhhhhhhhheecccCCChHHHhhCCccccccccchHHHHHH
Q 041225 574 FTGFSTTSALTDWSSVFYSLLYTSVPTIVVGIVDKDLSHKTLMQYPKLYVVQQYLWPSDIQI 635 (658)
Q Consensus 574 ~~~~s~~~~~~~~~~~~~n~~~~~~p~~~~~~~~~~~~~~~~~~~p~~y~~~~~~~~~~~~~ 635 (658)
+ ..+.|+++++++|+|++++.+|+++++. ++.+.+.+.+.|......-..|..+..+
T Consensus 704 ~---~~~~pl~~~qiL~inl~~d~~~a~~l~~--e~~~~~~m~~~P~~~~~~~~~~~~~~~~ 760 (884)
T TIGR01522 704 M---GFPNPLNAMQILWINILMDGPPAQSLGV--EPVDKDVMRKPPRPRNDKILTKDLIKKI 760 (884)
T ss_pred H---cCCCchhHHHHHHHHHHHHhhHHHHhcc--CCCChhHhhCCCCCCCCCccCHHHHHHH
Confidence 5 5568999999999999999999999975 4445566656665544433444333333
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-57 Score=518.06 Aligned_cols=417 Identities=19% Similarity=0.227 Sum_probs=320.4
Q ss_pred CCCeeeeccCCcccccccceEEEeccCcccccceEEEEEEEEcCcccCCchhhHHHHHHHHHhhhccccccccChHHHHH
Q 041225 23 SGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCGKNYGNSLLLAQQVSAAAVRRWKLKSEISVDSKLMEL 102 (658)
Q Consensus 23 ~~~~i~vr~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (658)
.++|++||+++++|+||++++||||||||||+|+|+|.+++..+.. .
T Consensus 351 ak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~~~~~-~-------------------------------- 397 (903)
T PRK15122 351 ARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLDVSGR-K-------------------------------- 397 (903)
T ss_pred HHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEEcCCCC-C--------------------------------
Confidence 4678999999999999999999999999999999999987632210 0
Q ss_pred HhhccCcchhHHHHHHHHHHhhccceeecCCCCCCCCCCCCcccCCcceeeecCChhHHHHHHHHHHcCcEEEEEcCCeE
Q 041225 103 LSKDLVGDERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYTLFERTSGHI 182 (658)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~~ 182 (658)
..+++...++|. .. + ...+||.|.|+++++...|...
T Consensus 398 ------------~~~~l~~a~l~s-~~----~------------------~~~~~p~e~All~~a~~~~~~~-------- 434 (903)
T PRK15122 398 ------------DERVLQLAWLNS-FH----Q------------------SGMKNLMDQAVVAFAEGNPEIV-------- 434 (903)
T ss_pred ------------hHHHHHHHHHhC-CC----C------------------CCCCChHHHHHHHHHHHcCchh--------
Confidence 011222222321 00 0 0135999999999998765421
Q ss_pred EEEeCCcEEEEEEEEeeCCCCCCCeeEEEEEcCCCcEEEEEeCCchHhHHhhhcCc------cccHHHHHHHHHHHHHHh
Q 041225 183 VIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADSSMFNILAKDS------KRNDLIRHITQSHLSEYS 256 (658)
Q Consensus 183 ~~~~~g~~~~~~il~~~~F~s~rk~msviv~~~~~~~~l~~KGa~e~i~~~~~~~~------~~~~~~~~~~~~~~~~~~ 256 (658)
....++.+..+||++.||+|+++++..++.+++++|||+|.|+++|+... ..++..++.+.+.++.++
T Consensus 435 ------~~~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a 508 (903)
T PRK15122 435 ------KPAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRDGDTVRPLDEARRERLLALAEAYN 508 (903)
T ss_pred ------hhhcCceEEEeeeCCCcCEEEEEEEcCCCcEEEEECCcHHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHH
Confidence 01235567789999999999999998888899999999999999997532 234556778888899999
Q ss_pred hcCCeEEEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccccCCChHHHHHHHHhcCCe
Q 041225 257 SQGLRTLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIK 336 (658)
Q Consensus 257 ~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~ 336 (658)
.+|+|++++|||.++.++.... .....|.|++++|.++++|++|++++++|++|+++||+
T Consensus 509 ~~G~rvlavA~k~~~~~~~~~~--------------------~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~ 568 (903)
T PRK15122 509 ADGFRVLLVATREIPGGESRAQ--------------------YSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVA 568 (903)
T ss_pred hCCCEEEEEEEeccCccccccc--------------------cccccccCcEEEEEEeccCccHHHHHHHHHHHHHCCCe
Confidence 9999999999999865431100 00113568999999999999999999999999999999
Q ss_pred EEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCC
Q 041225 337 VWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAK 416 (658)
Q Consensus 337 v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (658)
++|+|||+..+|..+|+++|+.. +.+
T Consensus 569 v~miTGD~~~tA~aIA~~lGI~~--~~v---------------------------------------------------- 594 (903)
T PRK15122 569 VKVLTGDNPIVTAKICREVGLEP--GEP---------------------------------------------------- 594 (903)
T ss_pred EEEECCCCHHHHHHHHHHcCCCC--CCc----------------------------------------------------
Confidence 99999999999999999999942 111
Q ss_pred CCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhcCCCeEEEEcC
Q 041225 417 FSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGD 496 (658)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~~~~~v~aiGD 496 (658)
++|.++...-.+++ ...+. +..++++++|.||..+|+.|++. ++.|+|+||
T Consensus 595 ----------------------i~G~el~~~~~~el----~~~v~--~~~VfAr~sPe~K~~iV~~Lq~~-G~vVamtGD 645 (903)
T PRK15122 595 ----------------------LLGTEIEAMDDAAL----AREVE--ERTVFAKLTPLQKSRVLKALQAN-GHTVGFLGD 645 (903)
T ss_pred ----------------------cchHhhhhCCHHHH----HHHhh--hCCEEEEeCHHHHHHHHHHHHhC-CCEEEEECC
Confidence 11111111111111 11111 14589999999999999999998 689999999
Q ss_pred CcCChhhhhhcceeEEecCccchhhhhhcccccccccchHHHHhh-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 041225 497 GANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLV-HGHWNYQRIGYLVLYNFYRNAVFVLMLFWYILFT 575 (658)
Q Consensus 497 g~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~-~gr~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 575 (658)
|.||.|+|+.||+|||| |++.+.+|++||+|+.++++...+.++ +||..|.|+++++.|.+..|+..++..++..++
T Consensus 646 GvNDaPALk~ADVGIAm-g~gtdvAkeaADiVLldd~f~~Iv~ai~~gR~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~- 723 (903)
T PRK15122 646 GINDAPALRDADVGISV-DSGADIAKESADIILLEKSLMVLEEGVIKGRETFGNIIKYLNMTASSNFGNVFSVLVASAF- 723 (903)
T ss_pred CchhHHHHHhCCEEEEe-CcccHHHHHhcCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH-
Confidence 99999999999999999 567777999999999999999998877 899999999999999999999887776665555
Q ss_pred ccccccchhhHHHHHHHHHHhhhhhhhheecccCCChHHHhhCCccccccccchHHH
Q 041225 576 GFSTTSALTDWSSVFYSLLYTSVPTIVVGIVDKDLSHKTLMQYPKLYVVQQYLWPSD 632 (658)
Q Consensus 576 ~~s~~~~~~~~~~~~~n~~~~~~p~~~~~~~~~~~~~~~~~~~p~~y~~~~~~~~~~ 632 (658)
....|+.+.+++|.|++++. |+++++. .+++++.+ +.|.-+...-..+..+
T Consensus 724 --~~~~pl~~~qil~~nli~D~-~~lal~~--d~~~~~~m-~~P~~~~~~~~~~~~~ 774 (903)
T PRK15122 724 --IPFLPMLAIHLLLQNLMYDI-SQLSLPW--DKMDKEFL-RKPRKWDAKNIGRFML 774 (903)
T ss_pred --hccchhHHHHHHHHHHHHHH-HHHhhcC--CCCCHhhc-CCCCCCChhhhHHHHH
Confidence 23468999999999999995 8888864 33344444 8887766554444333
|
|
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-57 Score=514.46 Aligned_cols=420 Identities=21% Similarity=0.263 Sum_probs=321.8
Q ss_pred CCCeeeeccCCcccccccceEEEeccCcccccceEEEEEEEEcCcccCCchhhHHHHHHHHHhhhccccccccChHHHHH
Q 041225 23 SGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCGKNYGNSLLLAQQVSAAAVRRWKLKSEISVDSKLMEL 102 (658)
Q Consensus 23 ~~~~i~vr~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (658)
.++|++||+++++|+||++++||||||||||+|+|+|.++.... +.
T Consensus 353 ak~~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~~~---~~------------------------------- 398 (902)
T PRK10517 353 SKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDIS---GK------------------------------- 398 (902)
T ss_pred HhCCcEEecchhhhhccCCCEEEecCCCccccceEEEEEEecCC---CC-------------------------------
Confidence 46789999999999999999999999999999999999863110 00
Q ss_pred HhhccCcchhHHHHHHHHHHhhccceeecCCCCCCCCCCCCcccCCcceeeecCChhHHHHHHHHHHcCcEEEEEcCCeE
Q 041225 103 LSKDLVGDERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYTLFERTSGHI 182 (658)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~~ 182 (658)
..++++...++|.... ...+||.|.|+++++...+.
T Consensus 399 -----------~~~~ll~~a~l~~~~~-----------------------~~~~~p~d~All~~a~~~~~---------- 434 (902)
T PRK10517 399 -----------TSERVLHSAWLNSHYQ-----------------------TGLKNLLDTAVLEGVDEESA---------- 434 (902)
T ss_pred -----------CHHHHHHHHHhcCCcC-----------------------CCCCCHHHHHHHHHHHhcch----------
Confidence 0012334444432110 01259999999999865320
Q ss_pred EEEeCCcEEEEEEEEeeCCCCCCCeeEEEEEcCCCcEEEEEeCCchHhHHhhhcCc------cccHHHHHHHHHHHHHHh
Q 041225 183 VIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADSSMFNILAKDS------KRNDLIRHITQSHLSEYS 256 (658)
Q Consensus 183 ~~~~~g~~~~~~il~~~~F~s~rk~msviv~~~~~~~~l~~KGa~e~i~~~~~~~~------~~~~~~~~~~~~~~~~~~ 256 (658)
......++.+..+||+|+||||+++++.+++.+.+++|||+|.|+++|+... ..++..++.+.+..+.++
T Consensus 435 ----~~~~~~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a 510 (902)
T PRK10517 435 ----RSLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHNGEIVPLDDIMLRRIKRVTDTLN 510 (902)
T ss_pred ----hhhhhcCceEEEeeeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhchhhhcCCCeecCCHHHHHHHHHHHHHHH
Confidence 0011245667789999999999999998888889999999999999998532 234556777888899999
Q ss_pred hcCCeEEEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccccCCChHHHHHHHHhcCCe
Q 041225 257 SQGLRTLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIK 336 (658)
Q Consensus 257 ~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~ 336 (658)
.+|+||+++|||.++.++.. + . ...|.|++++|.++++|++||+++++|++|+++||+
T Consensus 511 ~~G~rvlavA~k~~~~~~~~-~----~-----------------~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~ 568 (902)
T PRK10517 511 RQGLRVVAVATKYLPAREGD-Y----Q-----------------RADESDLILEGYIAFLDPPKETTAPALKALKASGVT 568 (902)
T ss_pred hcCCEEEEEEEecCCccccc-c----c-----------------cccccCceeeehHhhhCcchhhHHHHHHHHHHCCCE
Confidence 99999999999988653210 0 0 012568999999999999999999999999999999
Q ss_pred EEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCC
Q 041225 337 VWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAK 416 (658)
Q Consensus 337 v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (658)
++|+|||+..+|..+|+++|+.. +.++
T Consensus 569 v~miTGD~~~tA~~IA~~lGI~~--~~v~--------------------------------------------------- 595 (902)
T PRK10517 569 VKILTGDSELVAAKVCHEVGLDA--GEVL--------------------------------------------------- 595 (902)
T ss_pred EEEEcCCCHHHHHHHHHHcCCCc--cCce---------------------------------------------------
Confidence 99999999999999999999942 1111
Q ss_pred CCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhcCCCeEEEEcC
Q 041225 417 FSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGD 496 (658)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~~~~~v~aiGD 496 (658)
.|.++...-.+++. ..+. +..++++.+|.+|..+|+.+++. ++.|+|+||
T Consensus 596 -----------------------~G~el~~l~~~el~----~~~~--~~~VfAr~sPe~K~~IV~~Lq~~-G~vVam~GD 645 (902)
T PRK10517 596 -----------------------IGSDIETLSDDELA----NLAE--RTTLFARLTPMHKERIVTLLKRE-GHVVGFMGD 645 (902)
T ss_pred -----------------------eHHHHHhCCHHHHH----HHHh--hCcEEEEcCHHHHHHHHHHHHHC-CCEEEEECC
Confidence 11111110001111 1111 14589999999999999999997 689999999
Q ss_pred CcCChhhhhhcceeEEecCccchhhhhhcccccccccchHHHHhh-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 041225 497 GANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLV-HGHWNYQRIGYLVLYNFYRNAVFVLMLFWYILFT 575 (658)
Q Consensus 497 g~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~-~gr~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 575 (658)
|.||+|+|+.||+|||| +++.+.+|++||+|+.++++.....++ +||..|.|+++++.|.+..|+..++..++..++.
T Consensus 646 GvNDaPALk~ADVGIAm-g~gtdvAkeaADiVLldd~~~~I~~ai~~gR~i~~nI~k~i~~~ls~n~~~v~~~~~~~~~~ 724 (902)
T PRK10517 646 GINDAPALRAADIGISV-DGAVDIAREAADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFL 724 (902)
T ss_pred CcchHHHHHhCCEEEEe-CCcCHHHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHh
Confidence 99999999999999999 577778999999999999999988877 8999999999999999999998888877766662
Q ss_pred ccccccchhhHHHHHHHHHHhhhhhhhheecccCCChHHHhhCCccccccccchHHHHHHHH
Q 041225 576 GFSTTSALTDWSSVFYSLLYTSVPTIVVGIVDKDLSHKTLMQYPKLYVVQQYLWPSDIQIAR 637 (658)
Q Consensus 576 ~~s~~~~~~~~~~~~~n~~~~~~p~~~~~~~~~~~~~~~~~~~p~~y~~~~~~~~~~~~~~~ 637 (658)
...|+.+.+++|.|++++ +|.++++.. + ....+++.|..|......+...+..+.
T Consensus 725 ---~~~pl~~~qiL~inl~~D-~~~~al~~d--~-~~~~~m~~p~r~~~~~~~~~~~~~g~~ 779 (902)
T PRK10517 725 ---PFLPMLPLHLLIQNLLYD-VSQVAIPFD--N-VDDEQIQKPQRWNPADLGRFMVFFGPI 779 (902)
T ss_pred ---hhhhhHHHHHHHHHHHHH-HhHHhhcCC--C-CChhhhcCCCCCCHHHHHHHHHHHHHH
Confidence 236899999999999999 788888642 2 334456778777666654444444443
|
|
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-56 Score=507.50 Aligned_cols=408 Identities=21% Similarity=0.273 Sum_probs=314.3
Q ss_pred CCCeeeeccCCcccccccceEEEeccCcccccceEEEEEEEEcCcccCCchhhHHHHHHHHHhhhccccccccChHHHHH
Q 041225 23 SGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCGKNYGNSLLLAQQVSAAAVRRWKLKSEISVDSKLMEL 102 (658)
Q Consensus 23 ~~~~i~vr~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (658)
.++|++||+++++|+||++++||||||||||+|+|+|.+++.....
T Consensus 318 ak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~~~~~---------------------------------- 363 (867)
T TIGR01524 318 SKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHIDSSGE---------------------------------- 363 (867)
T ss_pred HhCCcEEccchhhhhccCccEEEecCCCccccCeEEEEEEecCCCC----------------------------------
Confidence 4678999999999999999999999999999999999987421100
Q ss_pred HhhccCcchhHHHHHHHHHHhhccceeecCCCCCCCCCCCCcccCCcceeeecCChhHHHHHHHHHHcCcEEEEEcCCeE
Q 041225 103 LSKDLVGDERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYTLFERTSGHI 182 (658)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~~ 182 (658)
...+++...++|+.. +-..+||.|.|+++++......
T Consensus 364 -----------~~~~~l~~a~l~~~~-----------------------~~~~~~p~~~Al~~~~~~~~~~--------- 400 (867)
T TIGR01524 364 -----------TSERVLKMAWLNSYF-----------------------QTGWKNVLDHAVLAKLDESAAR--------- 400 (867)
T ss_pred -----------CHHHHHHHHHHhCCC-----------------------CCCCCChHHHHHHHHHHhhchh---------
Confidence 001223333333211 0013499999999998753211
Q ss_pred EEEeCCcEEEEEEEEeeCCCCCCCeeEEEEEcCCCcEEEEEeCCchHhHHhhhcCc------cccHHHHHHHHHHHHHHh
Q 041225 183 VIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADSSMFNILAKDS------KRNDLIRHITQSHLSEYS 256 (658)
Q Consensus 183 ~~~~~g~~~~~~il~~~~F~s~rk~msviv~~~~~~~~l~~KGa~e~i~~~~~~~~------~~~~~~~~~~~~~~~~~~ 256 (658)
.....++.+..+||+|+||||+++++++++.+.+++|||+|.|+++|++.. ..++..++.+.+.++.++
T Consensus 401 -----~~~~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~~~a 475 (867)
T TIGR01524 401 -----QTASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKSELQDMTAEMN 475 (867)
T ss_pred -----hHhhcCceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhchhhhcCCceecCCHHHHHHHHHHHHHHH
Confidence 011245667789999999999999998777788999999999999997542 124455677888899999
Q ss_pred hcCCeEEEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccccCCChHHHHHHHHhcCCe
Q 041225 257 SQGLRTLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIK 336 (658)
Q Consensus 257 ~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~ 336 (658)
.+|+|++++|||.++.++.. + . ...+.|++++|.++++|++|++++++|++|+++||+
T Consensus 476 ~~G~rvlavA~~~~~~~~~~-~----~-----------------~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~ 533 (867)
T TIGR01524 476 RQGIRVIAVATKTLKVGEAD-F----T-----------------KTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGIN 533 (867)
T ss_pred hcCCEEEEEEEeccCccccc-c----c-----------------ccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCE
Confidence 99999999999998654210 0 0 002467899999999999999999999999999999
Q ss_pred EEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCC
Q 041225 337 VWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAK 416 (658)
Q Consensus 337 v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (658)
++|+|||+..+|..+|+++|+... .++
T Consensus 534 vvmiTGD~~~tA~aIA~~lGI~~~--~v~--------------------------------------------------- 560 (867)
T TIGR01524 534 VKVLTGDNEIVTARICQEVGIDAN--DFL--------------------------------------------------- 560 (867)
T ss_pred EEEEcCCCHHHHHHHHHHcCCCCC--Cee---------------------------------------------------
Confidence 999999999999999999999532 111
Q ss_pred CCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhcCCCeEEEEcC
Q 041225 417 FSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGD 496 (658)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~~~~~v~aiGD 496 (658)
.|.++...-.+++ ...+. +..++++++|.+|..+|+.+++. ++.|+|+||
T Consensus 561 -----------------------~g~~l~~~~~~el----~~~~~--~~~vfAr~~Pe~K~~iV~~lq~~-G~vVam~GD 610 (867)
T TIGR01524 561 -----------------------LGADIEELSDEEL----ARELR--KYHIFARLTPMQKSRIIGLLKKA-GHTVGFLGD 610 (867)
T ss_pred -----------------------ecHhhhhCCHHHH----HHHhh--hCeEEEECCHHHHHHHHHHHHhC-CCEEEEECC
Confidence 1111100000001 11111 24589999999999999999998 689999999
Q ss_pred CcCChhhhhhcceeEEecCccchhhhhhcccccccccchHHHHhh-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 041225 497 GANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLV-HGHWNYQRIGYLVLYNFYRNAVFVLMLFWYILFT 575 (658)
Q Consensus 497 g~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~-~gr~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 575 (658)
|.||.|+|+.||+|||| +++.+.+|++||+|+.+.++.....++ +||..|+|+++++.|.+..|+..++..++..++.
T Consensus 611 GvNDapALk~AdVGIAm-g~gtdvAk~aADiVLldd~~~~I~~ai~~gR~i~~ni~k~i~~~ls~n~~~~~~~~~~~~~~ 689 (867)
T TIGR01524 611 GINDAPALRKADVGISV-DTAADIAKEASDIILLEKSLMVLEEGVIEGRNTFGNILKYLKMTASSNFGNVFSVLVASAFI 689 (867)
T ss_pred CcccHHHHHhCCEEEEe-CCccHHHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHh
Confidence 99999999999999999 567777999999999999999988877 8999999999999999999998888777666552
Q ss_pred ccccccchhhHHHHHHHHHHhhhhhhhheecccCCChHHHhhCCcccccc
Q 041225 576 GFSTTSALTDWSSVFYSLLYTSVPTIVVGIVDKDLSHKTLMQYPKLYVVQ 625 (658)
Q Consensus 576 ~~s~~~~~~~~~~~~~n~~~~~~p~~~~~~~~~~~~~~~~~~~p~~y~~~ 625 (658)
...|+.+.+++|+|++++ +|+++++. |.+...+++.|..+...
T Consensus 690 ---~~~pl~~~qil~inl~~d-~~~~al~~---~~~~~~~m~~p~~~~~~ 732 (867)
T TIGR01524 690 ---PFLPMLSLHLLIQNLLYD-FSQLTLPW---DKMDREFLKKPHQWEQK 732 (867)
T ss_pred ---hhhhHHHHHHHHHHHHHH-HHHHhhcC---CCCChHhhCCCCCCChh
Confidence 346899999999999999 79999874 22334455677765443
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-55 Score=461.57 Aligned_cols=477 Identities=21% Similarity=0.235 Sum_probs=370.8
Q ss_pred CCCeeeeccCCcccccccceEEEeccCcccccceEEEEEEEEcCcccCCchhhHHHHHHHHHhhhccccccccChHHHHH
Q 041225 23 SGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCGKNYGNSLLLAQQVSAAAVRRWKLKSEISVDSKLMEL 102 (658)
Q Consensus 23 ~~~~i~vr~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (658)
.+|+++||++.++|+||..++||||||||||+|+|+|.++|.+......+... .+++
T Consensus 348 a~Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~-------~~~~---------------- 404 (1019)
T KOG0203|consen 348 ARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTE-------DQSG---------------- 404 (1019)
T ss_pred hhceeEEeeeeheeecccceeEeecceeeEEecceEEEeeccCCceeeeechh-------hhhc----------------
Confidence 46889999999999999999999999999999999999999887654322110 0000
Q ss_pred HhhccCcchhHHHHHHHHHHhhccceeecCCCCCCCCCCCCcccCCcceeeecCChhHHHHHHHHHHcCcEEEEEcCCeE
Q 041225 103 LSKDLVGDERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYTLFERTSGHI 182 (658)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~~ 182 (658)
......+.....+..+..+||.+.....+... ..-. .-..+++.|.||++|+...-..
T Consensus 405 ---~~~~~~~~~~~~l~r~~~lCn~a~~~~gq~dv---------Pv~k-k~v~G~~se~ALlk~~e~~~~~--------- 462 (1019)
T KOG0203|consen 405 ---QSFDKSSATFIALSRIATLCNRAVFKPGQDDV---------PVLK-RDVAGDASEVALLKFIELILGS--------- 462 (1019)
T ss_pred ---ccccccCchHHHHHHHHHHhCcceecccccCC---------ceee-eeccCCHHHHHHHHHHHHhcch---------
Confidence 00011234567788999999999887554311 0011 1234599999999999754221
Q ss_pred EEEeCCcEEEEEEEEeeCCCCCCCeeEEEEEcCC---CcEEEEEeCCchHhHHhhhcC------ccccHHHHHHHHHHHH
Q 041225 183 VIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPD---NSVKVLVKGADSSMFNILAKD------SKRNDLIRHITQSHLS 253 (658)
Q Consensus 183 ~~~~~g~~~~~~il~~~~F~s~rk~msviv~~~~---~~~~l~~KGa~e~i~~~~~~~------~~~~~~~~~~~~~~~~ 253 (658)
+..-+.+++.+...||+|.+|+.-.+.+..+ .++.+.+|||||.++++|+.. ...+++.++.+.....
T Consensus 463 ---~~~~R~~~~kv~eipfNSt~Kyqlsih~~~d~~~~~~~l~mKGape~il~~CSTi~i~g~e~pld~~~~~~f~~ay~ 539 (1019)
T KOG0203|consen 463 ---VMELRERNPKVAEIPFNSTNKYQLSIHETEDPSDPRFLLVMKGAPERILDRCSTILINGEEKPLDEKLKEAFQEAYL 539 (1019)
T ss_pred ---HHHHHHhhHHhhcCCcccccceEEEEEecCCCCCccceeeecCChHHHHhhccceeecCCCCCcCHHHHHHHHHHHH
Confidence 1233456777889999999999999998765 467889999999999999853 3457889999999999
Q ss_pred HHhhcCCeEEEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccccCCChHHHHHHHHhc
Q 041225 254 EYSSQGLRTLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQA 333 (658)
Q Consensus 254 ~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~ 333 (658)
.+...|.||++||++.++++++++.-+-. .....+-..++.|+|.+++-|++|..+++|+.+++.+
T Consensus 540 ~lg~~GerVlgF~~~~l~~~~~p~~~~f~--------------~d~~n~p~~nl~FlGl~s~idPPR~~vP~Av~~CrsA 605 (1019)
T KOG0203|consen 540 ELGGLGERVLGFCDLELPDEKFPRGFQFD--------------TDDVNFPTDNLRFLGLISMIDPPRAAVPDAVGKCRSA 605 (1019)
T ss_pred HhhhcchHHHHHHHHhcchhcCCCceEee--------------cCCCCCcchhccccchhhccCCCcccCchhhhhhhhh
Confidence 99999999999999999988665321100 0112234557899999999999999999999999999
Q ss_pred CCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhc
Q 041225 334 GIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISN 413 (658)
Q Consensus 334 GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (658)
||+++|+|||++.+|.++|++.||+....++ .+.+.+..
T Consensus 606 GIkvimVTgdhpiTAkAiA~~vgIi~~~~et----------~e~~a~r~------------------------------- 644 (1019)
T KOG0203|consen 606 GIKVIMVTGDHPITAKAIAKSVGIISEGSET----------VEDIAKRL------------------------------- 644 (1019)
T ss_pred CceEEEEecCccchhhhhhhheeeecCCchh----------hhhhHHhc-------------------------------
Confidence 9999999999999999999999987653221 11111000
Q ss_pred CCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhcCCCeEEE
Q 041225 414 DAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLA 493 (658)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~~~~~v~a 493 (658)
.... ..+......+.++.|.++...-.+++. .++......+++|.+|.||..+++..++. ++.|..
T Consensus 645 ~~~v---------~~vn~~~a~a~VihG~eL~~~~~~qld----~il~nh~eIVFARTSPqQKLiIVe~cQr~-GaiVaV 710 (1019)
T KOG0203|consen 645 NIPV---------EQVNSRDAKAAVIHGSELPDMSSEQLD----ELLQNHQEIVFARTSPQQKLIIVEGCQRQ-GAIVAV 710 (1019)
T ss_pred CCcc---------cccCccccceEEEecccccccCHHHHH----HHHHhCCceEEEecCccceEEeEhhhhhc-CcEEEE
Confidence 0000 011122245778888887766555443 34455567899999999999999999998 689999
Q ss_pred EcCCcCChhhhhhcceeEEecCccchhhhhhcccccccccchHHHHhh-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 041225 494 IGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLV-HGHWNYQRIGYLVLYNFYRNAVFVLMLFWYI 572 (658)
Q Consensus 494 iGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~-~gr~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 572 (658)
.|||.||.|+||.||+||||.-++++.+|++||+|+.|++|.+++.-+ +||.+|+|++|.|.|++..|+..+.|.++|.
T Consensus 711 TGDGVNDsPALKKADIGVAMGiaGSDvsKqAADmILLDDNFASIVtGVEEGRLiFDNLKKsIAYTLTsNipEI~PfL~fi 790 (1019)
T KOG0203|consen 711 TGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFI 790 (1019)
T ss_pred eCCCcCCChhhcccccceeeccccchHHHhhcceEEecCcchhheeecccceehhhhHHHHHHHHHHhcchhHhHHHHHH
Confidence 999999999999999999995556666899999999999999999888 8999999999999999999999999998888
Q ss_pred HhhccccccchhhHHHHHHHHHHhhhhhhhheecccCCChHHHhhCCcc
Q 041225 573 LFTGFSTTSALTDWSSVFYSLLYTSVPTIVVGIVDKDLSHKTLMQYPKL 621 (658)
Q Consensus 573 ~~~~~s~~~~~~~~~~~~~n~~~~~~p~~~~~~~~~~~~~~~~~~~p~~ 621 (658)
++ ..+.++..+.++++++.++++|++.+|.+ ....+.+++.|.-
T Consensus 791 ~~---giPLplgtitIL~IDLgTDmvPAiSLAYE--~aEsDIM~r~PR~ 834 (1019)
T KOG0203|consen 791 LF---GIPLPLGTVTILCIDLGTDIVPAISLAYE--KAESDIMLRPPRN 834 (1019)
T ss_pred Hh---CCCcccchhhhhhhHhhcccchhhhHhcc--CchhhHHhcCCCC
Confidence 87 67889999999999999999999999743 2344555666665
|
|
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-53 Score=477.81 Aligned_cols=394 Identities=22% Similarity=0.283 Sum_probs=307.7
Q ss_pred CCCeeeeccCCcccccccceEEEeccCcccccceEEEEEEEEcCcccCCchhhHHHHHHHHHhhhccccccccChHHHHH
Q 041225 23 SGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCGKNYGNSLLLAQQVSAAAVRRWKLKSEISVDSKLMEL 102 (658)
Q Consensus 23 ~~~~i~vr~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (658)
.++|++||+++++|+||++++||||||||||+|+|+|.+++..+..+.
T Consensus 268 ak~gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~~-------------------------------- 315 (755)
T TIGR01647 268 AKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILPFFNGFD-------------------------------- 315 (755)
T ss_pred HhCCeEEcccHHHHhccCCcEEEecCCCccccCceEEEEEEecCCCCC--------------------------------
Confidence 467899999999999999999999999999999999999976542110
Q ss_pred HhhccCcchhHHHHHHHHHHhhccceeecCCCCCCCCCCCCcccCCcceeeecCChhHHHHHHHHHHcCcEEEEEcCCeE
Q 041225 103 LSKDLVGDERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYTLFERTSGHI 182 (658)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~~ 182 (658)
..+++...++|+. ..+.||.|.|+++++.+.+.
T Consensus 316 ------------~~~~l~~a~~~~~-------------------------~~~~~pi~~Ai~~~~~~~~~---------- 348 (755)
T TIGR01647 316 ------------KDDVLLYAALASR-------------------------EEDQDAIDTAVLGSAKDLKE---------- 348 (755)
T ss_pred ------------HHHHHHHHHHhCC-------------------------CCCCChHHHHHHHHHHHhHH----------
Confidence 1123444455541 01349999999999876430
Q ss_pred EEEeCCcEEEEEEEEeeCCCCCCCeeEEEEEcCC-CcEEEEEeCCchHhHHhhhcCccccHHHHHHHHHHHHHHhhcCCe
Q 041225 183 VIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPD-NSVKVLVKGADSSMFNILAKDSKRNDLIRHITQSHLSEYSSQGLR 261 (658)
Q Consensus 183 ~~~~~g~~~~~~il~~~~F~s~rk~msviv~~~~-~~~~l~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r 261 (658)
....++++..+||++.+|+|+++++.++ ++.++++||+++.|+++|+.. +..++.+.+.+++++.+|+|
T Consensus 349 ------~~~~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~il~~c~~~----~~~~~~~~~~~~~~~~~G~r 418 (755)
T TIGR01647 349 ------ARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNK----KEIEEKVEEKVDELASRGYR 418 (755)
T ss_pred ------HHhcCceEEEeccCCCCCeEEEEEEeCCCceEEEEEeCChHHHHHhcCCc----HHHHHHHHHHHHHHHhCCCE
Confidence 0123566788999999999999998775 777889999999999999753 23567788889999999999
Q ss_pred EEEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEe
Q 041225 262 TLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLT 341 (658)
Q Consensus 262 ~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~T 341 (658)
++++|+|. .|.|++++|.++++|++||+++++|++|+++||+++|+|
T Consensus 419 vl~vA~~~---------------------------------~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miT 465 (755)
T TIGR01647 419 ALGVARTD---------------------------------EEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVT 465 (755)
T ss_pred EEEEEEEc---------------------------------CCCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEEEC
Confidence 99999983 135789999999999999999999999999999999999
Q ss_pred cCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCC
Q 041225 342 GDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVP 421 (658)
Q Consensus 342 Gr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (658)
||+..+|..+|+++|+... ++ +.+++
T Consensus 466 GD~~~tA~~IA~~lGI~~~---~~-----~~~~l---------------------------------------------- 491 (755)
T TIGR01647 466 GDHLAIAKETARRLGLGTN---IY-----TADVL---------------------------------------------- 491 (755)
T ss_pred CCCHHHHHHHHHHcCCCCC---Cc-----CHHHh----------------------------------------------
Confidence 9999999999999999532 00 00000
Q ss_pred CCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhcCCCeEEEEcCCcCCh
Q 041225 422 QGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDV 501 (658)
Q Consensus 422 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~~~~~v~aiGDg~NDi 501 (658)
..+.+....-.+ .+...+.. ..++++++|.||..+|+.+++. ++.|+|+|||.||.
T Consensus 492 -----------------~~~~~~~~~~~~----~~~~~~~~--~~vfAr~~Pe~K~~iV~~lq~~-G~~VamvGDGvNDa 547 (755)
T TIGR01647 492 -----------------LKGDNRDDLPSG----ELGEMVED--ADGFAEVFPEHKYEIVEILQKR-GHLVGMTGDGVNDA 547 (755)
T ss_pred -----------------cCCcchhhCCHH----HHHHHHHh--CCEEEecCHHHHHHHHHHHHhc-CCEEEEEcCCcccH
Confidence 000000000000 01111111 3489999999999999999997 68999999999999
Q ss_pred hhhhhcceeEEecCccchhhhhhcccccccccchHHHHhh-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc
Q 041225 502 SMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLV-HGHWNYQRIGYLVLYNFYRNAVFVLMLFWYILFTGFSTT 580 (658)
Q Consensus 502 ~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~-~gr~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~s~~ 580 (658)
|+|+.||+|||| +++.+.+|++||+|+.+.++...+.++ +||..|+|+++++.|.+..|+..+++.++..++.++
T Consensus 548 pAL~~AdVGIAm-~~gtdvAkeaADivLl~d~l~~I~~ai~~gR~~~~ni~k~i~~~~~~n~~~~~~~~~~~l~~~~--- 623 (755)
T TIGR01647 548 PALKKADVGIAV-AGATDAARSAADIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRIAETIRIVFFFGLLILILNF--- 623 (755)
T ss_pred HHHHhCCeeEEe-cCCcHHHHHhCCEEEEcCChHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCc---
Confidence 999999999999 567778999999999999999998877 899999999999999999999888777666655433
Q ss_pred cchhhHHHHHHHHHHhhhhhhhheecccCCChHHHhhCCcccccccc
Q 041225 581 SALTDWSSVFYSLLYTSVPTIVVGIVDKDLSHKTLMQYPKLYVVQQY 627 (658)
Q Consensus 581 ~~~~~~~~~~~n~~~~~~p~~~~~~~~~~~~~~~~~~~p~~y~~~~~ 627 (658)
++++++++|.|++.+. |.++++....+. .+.|.-|.....
T Consensus 624 -~l~~~~il~~~l~~d~-~~~~l~~~~~~~-----~~~p~~~~~~~~ 663 (755)
T TIGR01647 624 -YFPPIMVVIIAILNDG-TIMTIAYDNVKP-----SKLPQRWNLREV 663 (755)
T ss_pred -chhHHHHHHHHHHHhH-hHhhccCCCCCC-----CCCCCccchHHH
Confidence 3899999999999885 688886544432 266776665433
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-52 Score=444.93 Aligned_cols=538 Identities=22% Similarity=0.277 Sum_probs=366.9
Q ss_pred cCCCCCeeeeccCCcccccccceEEEeccCcccccceEEEEEEEEcCcccCCchhhHHHHHHHHHhhhccccccccChHH
Q 041225 20 DSSSGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCGKNYGNSLLLAQQVSAAAVRRWKLKSEISVDSKL 99 (658)
Q Consensus 20 ~~~~~~~i~vr~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (658)
...++++|.|-++..+..-|+++++|||||||||++.+++.++......-............ .
T Consensus 447 ~RLkkk~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~~~~~~~~~~-----------------~ 509 (1140)
T KOG0208|consen 447 SRLKKKGIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDDGPELKVVTED-----------------S 509 (1140)
T ss_pred HHHHhcCeEEcCccceeecceeeEEEEcCCCcccccceeEEEEEeccccccccchhhhhhhh-----------------h
Confidence 35678999999999999999999999999999999999999987643221111000000000 0
Q ss_pred HHHHhhccCcchhHHHHHHHHHHhhccceeecCCCCCCCCCCCCcccCCcceeeecCChhHHHHHHHHHHcCcEEEEE--
Q 041225 100 MELLSKDLVGDERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYTLFER-- 177 (658)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~-- 177 (658)
....-+............+..++|.||+++.....-.+ +|.|.-+.+. .||.+.+.
T Consensus 510 ~~~~~~l~~~~~~~~~~~~~~a~atCHSL~~v~g~l~G-------------------DPLdlkmfe~---t~w~~ee~~~ 567 (1140)
T KOG0208|consen 510 LQLFYKLSLRSSSLPMGNLVAAMATCHSLTLVDGTLVG-------------------DPLDLKMFES---TGWVYEEADI 567 (1140)
T ss_pred ccceeeccccccCCchHHHHHHHhhhceeEEeCCeecc-------------------Cceeeeeeec---cceEEEeccc
Confidence 00000000011111234678899999998887655333 4444333322 23333221
Q ss_pred ---------cCCeEEEEeCC----c-----EEEEEEEEeeCCCCCCCeeEEEEEcCC-CcEEEEEeCCchHhHHhhhcCc
Q 041225 178 ---------TSGHIVIDING----E-----GLRLDVLGLHEFDSVRKRMSVVIRFPD-NSVKVLVKGADSSMFNILAKDS 238 (658)
Q Consensus 178 ---------~~~~~~~~~~g----~-----~~~~~il~~~~F~s~rk~msviv~~~~-~~~~l~~KGa~e~i~~~~~~~~ 238 (658)
+....+++.+. + ...+-|++.+||+|..+||||||+.++ +...+|+|||||.|.++|++..
T Consensus 568 ~~~~~~~~~~~~p~v~~p~~~~~~~~t~~~~~~~si~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p~t 647 (1140)
T KOG0208|consen 568 EDEATREFNTLIPTVVRPPENAFNQSTECGEGEISIVKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICKPET 647 (1140)
T ss_pred cchhhhhhCCccCCEeCCCcccccCCCcCCCcceEEEEecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcCccc
Confidence 01111222211 1 126899999999999999999999985 6688999999999999999875
Q ss_pred cccHHHHHHHHHHHHHHhhcCCeEEEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccc
Q 041225 239 KRNDLIRHITQSHLSEYSSQGLRTLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDK 318 (658)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~ 318 (658)
+++.+.+.++.|+.+|+|++++|+|.|... .|.+.. .-....+|.|++|+|.+.++++
T Consensus 648 -----vP~dy~evl~~Yt~~GfRVIAlA~K~L~~~---~~~~~~--------------~~~Rd~vEs~l~FlGLiVmeNk 705 (1140)
T KOG0208|consen 648 -----VPADYQEVLKEYTHQGFRVIALASKELETS---TLQKAQ--------------KLSRDTVESNLEFLGLIVMENK 705 (1140)
T ss_pred -----CCccHHHHHHHHHhCCeEEEEEecCccCcc---hHHHHh--------------hccHhhhhccceeeEEEEeecc
Confidence 578899999999999999999999999876 222211 1134568899999999999999
Q ss_pred cCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHH--HHHHHHHHHHhcCcccCccccc
Q 041225 319 LQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEE--CKDLLADAKARYGVKSSNRTKC 396 (658)
Q Consensus 319 l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~--~~~ii~~~~~~~~~~~~~~~~~ 396 (658)
++++++.+|++|.++.|+.+|||||+..||..+|++||++.+..+++.....+.+. ..++
T Consensus 706 LK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi~p~~~v~~~~~~~~~~~~~~~i------------------ 767 (1140)
T KOG0208|consen 706 LKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKECGMIEPQVKVIIPELEPPEDDSIAQI------------------ 767 (1140)
T ss_pred cccccHHHHHHHHhhcceEEEEcCCchheeeehhhcccccCCCCeEEEEeccCCccCCCcee------------------
Confidence 99999999999999999999999999999999999999999988887765432110 0000
Q ss_pred cccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccH
Q 041225 397 NSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQK 476 (658)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K 476 (658)
.+...+.. ...... .....+........+.-....+.++++|+.+..++ .+..+.+..+... ..|++|++|.||
T Consensus 768 ~w~~ve~~--~~~~~~-~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~-~~~~~l~~~Il~~--~~VfARMsP~qK 841 (1140)
T KOG0208|consen 768 VWLCVESQ--TQFLDP-KEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVIL-EHFPELVPKILLK--GTVFARMSPDQK 841 (1140)
T ss_pred EEEEccCc--cccCCC-CccCccccCCccChhhhccceeEEEecCchhHHHH-hhcHHHHHHHHhc--CeEEeecCchhH
Confidence 00000000 000000 00000000000001222345678899999998887 3333334444444 448999999999
Q ss_pred HHHHHHHHhcCCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhcccccccccchHHHHhh-hhhhHHHHHHHHHH
Q 041225 477 AGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLV-HGHWNYQRIGYLVL 555 (658)
Q Consensus 477 ~~~v~~L~~~~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~-~gr~~~~~~~~~i~ 555 (658)
...|+.+++. +..|.++|||+||+.+||+||+||+.+.++ |..||.|+..-++..+.+.++ +||..+...-..++
T Consensus 842 ~~Lie~lQkl-~y~VgfCGDGANDCgALKaAdvGISLSeaE---ASvAApFTSk~~~I~cVp~vIrEGRaALVTSf~~Fk 917 (1140)
T KOG0208|consen 842 AELIEALQKL-GYKVGFCGDGANDCGALKAADVGISLSEAE---ASVAAPFTSKTPSISCVPDVIREGRAALVTSFACFK 917 (1140)
T ss_pred HHHHHHHHhc-CcEEEecCCCcchhhhhhhcccCcchhhhh---HhhcCccccCCCchhhHhHHHhhhhhhhhhhHHHHH
Confidence 9999999998 689999999999999999999999996555 889999999988888888766 99998887777777
Q ss_pred HHHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHHHHHhhhhhhhheecccCCChHHHhhCCccccc-cccchHHHHH
Q 041225 556 YNFYRNAVFVLMLFWYILFTGFSTTSALTDWSSVFYSLLYTSVPTIVVGIVDKDLSHKTLMQYPKLYVV-QQYLWPSDIQ 634 (658)
Q Consensus 556 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~n~~~~~~p~~~~~~~~~~~~~~~~~~~p~~y~~-~~~~~~~~~~ 634 (658)
|.-.+++ ++|+..++. +.-...++++|.++++++....-+++++-++ ...+.-...|.-.-. ....-+.+.|
T Consensus 918 YMalYs~----iqFisv~~L-Y~~~~nl~D~Qfl~iDLlii~pia~~m~~~~--a~~~L~~~rP~~~L~s~~~~~~l~~q 990 (1140)
T KOG0208|consen 918 YMALYSA----IQFISVVFL-YLINSNLGDLQFLFIDLLIITPIAVMMSRFD--ASDKLFPKRPPTNLLSKKILVPLLLQ 990 (1140)
T ss_pred HHHHHHH----HHHHhhhee-eeecccccchhhhhhHHHHHHHHHHHHccCc--HHHHhcCCCCCccccccchhhhhHHH
Confidence 7543333 233332222 2344678899999999888876666665443 233333333433222 2355577899
Q ss_pred HHHHHHHHhhccccccCcc
Q 041225 635 IAREAEVLRKGSNYLAPQA 653 (658)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~ 653 (658)
++....+...|..+..||.
T Consensus 991 ~vli~l~q~i~~l~~~~qp 1009 (1140)
T KOG0208|consen 991 IVLICLVQWILTLIVEPQP 1009 (1140)
T ss_pred HHHHHHHHHhhheeecccc
Confidence 9999999999988887775
|
|
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-46 Score=408.42 Aligned_cols=363 Identities=19% Similarity=0.225 Sum_probs=283.3
Q ss_pred CCCCeeeeccCCcccccccceEEEeccCcccccceEEEEEEEEcCcccCCchhhHHHHHHHHHhhhccccccccChHHHH
Q 041225 22 SSGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCGKNYGNSLLLAQQVSAAAVRRWKLKSEISVDSKLME 101 (658)
Q Consensus 22 ~~~~~i~vr~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (658)
..++|+++|++.++|+||++++||||||||||+|++.+.++...+.
T Consensus 279 ~ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~~~~---------------------------------- 324 (673)
T PRK14010 279 VTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIPVKS---------------------------------- 324 (673)
T ss_pred HhhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEeCCC----------------------------------
Confidence 3578899999999999999999999999999997776666432110
Q ss_pred HHhhccCcchhHHHHHHHHHHhhccceeecCCCCCCCCCCCCcccCCcceeeecCChhHHHHHHHHHHcCcEEEEEcCCe
Q 041225 102 LLSKDLVGDERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYTLFERTSGH 181 (658)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~ 181 (658)
....+++.+.++|+.. +.||.++|+++++++.|+....
T Consensus 325 -----------~~~~~ll~~a~~~~~~--------------------------s~~P~~~AIv~~a~~~~~~~~~----- 362 (673)
T PRK14010 325 -----------SSFERLVKAAYESSIA--------------------------DDTPEGRSIVKLAYKQHIDLPQ----- 362 (673)
T ss_pred -----------ccHHHHHHHHHHhcCC--------------------------CCChHHHHHHHHHHHcCCCchh-----
Confidence 0112345566667521 2399999999999887653210
Q ss_pred EEEEeCCcEEEEEEEEeeCCCCCCCeeEEEEEcCCCcEEEEEeCCchHhHHhhhcCccccHHHHHHHHHHHHHHhhcCCe
Q 041225 182 IVIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADSSMFNILAKDSKRNDLIRHITQSHLSEYSSQGLR 261 (658)
Q Consensus 182 ~~~~~~g~~~~~~il~~~~F~s~rk~msviv~~~~~~~~l~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r 261 (658)
......||++++|+|++.++ +. .+.||+++.+++.|..... .....+.+..++++.+|+|
T Consensus 363 ------------~~~~~~pF~~~~k~~gv~~~---g~--~i~kGa~~~il~~~~~~g~---~~~~~~~~~~~~~a~~G~~ 422 (673)
T PRK14010 363 ------------EVGEYIPFTAETRMSGVKFT---TR--EVYKGAPNSMVKRVKEAGG---HIPVDLDALVKGVSKKGGT 422 (673)
T ss_pred ------------hhcceeccccccceeEEEEC---CE--EEEECCHHHHHHHhhhcCC---CCchHHHHHHHHHHhCCCe
Confidence 00123799999999999754 22 4569999999999985321 1122355667788999999
Q ss_pred EEEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEe
Q 041225 262 TLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLT 341 (658)
Q Consensus 262 ~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~T 341 (658)
+++++ .|++++|.+++.|++|++++++|++|+++||+++|+|
T Consensus 423 ~l~v~--------------------------------------~~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiT 464 (673)
T PRK14010 423 PLVVL--------------------------------------EDNEILGVIYLKDVIKDGLVERFRELREMGIETVMCT 464 (673)
T ss_pred EEEEE--------------------------------------ECCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEEC
Confidence 98765 2578999999999999999999999999999999999
Q ss_pred cCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCC
Q 041225 342 GDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVP 421 (658)
Q Consensus 342 Gr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (658)
||+..+|..+|+++|+.
T Consensus 465 GDn~~TA~aIA~elGI~--------------------------------------------------------------- 481 (673)
T PRK14010 465 GDNELTAATIAKEAGVD--------------------------------------------------------------- 481 (673)
T ss_pred CCCHHHHHHHHHHcCCc---------------------------------------------------------------
Confidence 99999999999999982
Q ss_pred CCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhcCCCeEEEEcCCcCCh
Q 041225 422 QGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDV 501 (658)
Q Consensus 422 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~~~~~v~aiGDg~NDi 501 (658)
.++++.+|++|...|+.+++. ++.|+|+|||.||.
T Consensus 482 --------------------------------------------~v~A~~~PedK~~iV~~lQ~~-G~~VaMtGDGvNDA 516 (673)
T PRK14010 482 --------------------------------------------RFVAECKPEDKINVIREEQAK-GHIVAMTGDGTNDA 516 (673)
T ss_pred --------------------------------------------eEEcCCCHHHHHHHHHHHHhC-CCEEEEECCChhhH
Confidence 157899999999999999997 68999999999999
Q ss_pred hhhhhcceeEEecCccchhhhhhcccccccccchHHHHhh-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc
Q 041225 502 SMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLV-HGHWNYQRIGYLVLYNFYRNAVFVLMLFWYILFTGFSTT 580 (658)
Q Consensus 502 ~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~-~gr~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~s~~ 580 (658)
|+|+.||+|||| |++.+.+|++||+|+.++++.....++ +||..|.++++++.|.+..|+...+..+...|...+.+-
T Consensus 517 PALa~ADVGIAM-gsGTdvAkeAADiVLldd~ls~Iv~av~~gR~i~~n~~~~~~f~~~~~~~~~~~i~~a~~~~~~~~~ 595 (673)
T PRK14010 517 PALAEANVGLAM-NSGTMSAKEAANLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIANDIAKYFAILPAMFMAAMPAM 595 (673)
T ss_pred HHHHhCCEEEEe-CCCCHHHHHhCCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHheeeeccHHHHHHHHHHHHHHhcccc
Confidence 999999999999 577888999999999999999999887 899999999999999999999777766554444322221
Q ss_pred ---------cchhhHH-HHHHHHH--HhhhhhhhheecccCCChHHHhhCCcc-cccccc
Q 041225 581 ---------SALTDWS-SVFYSLL--YTSVPTIVVGIVDKDLSHKTLMQYPKL-YVVQQY 627 (658)
Q Consensus 581 ---------~~~~~~~-~~~~n~~--~~~~p~~~~~~~~~~~~~~~~~~~p~~-y~~~~~ 627 (658)
+|.+... -+.||.+ -.+.|.-.-|+-+++.+...+++..-+ |-.|..
T Consensus 596 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 655 (673)
T PRK14010 596 NHLNIMHLHSPESAVLSALIFNALIIVLLIPIAMKGVKFKGASTQTILMKNMLVYGLGGM 655 (673)
T ss_pred hhhccccCCChHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHHHhhCeEEeccCce
Confidence 2222222 2345533 335677777888999999888876554 776654
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-44 Score=394.74 Aligned_cols=366 Identities=19% Similarity=0.246 Sum_probs=282.7
Q ss_pred CCCCeeeeccCCcccccccceEEEeccCcccccceEEEEEEEEcCcccCCchhhHHHHHHHHHhhhccccccccChHHHH
Q 041225 22 SSGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCGKNYGNSLLLAQQVSAAAVRRWKLKSEISVDSKLME 101 (658)
Q Consensus 22 ~~~~~i~vr~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (658)
..++|+++|++.++|+||++++||||||||||+|+|.+.+++..+..
T Consensus 279 ~ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~--------------------------------- 325 (679)
T PRK01122 279 VLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLPVPGV--------------------------------- 325 (679)
T ss_pred HhcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEeCCCC---------------------------------
Confidence 35788999999999999999999999999999999999988643210
Q ss_pred HHhhccCcchhHHHHHHHHHHhhccceeecCCCCCCCCCCCCcccCCcceeeecCChhHHHHHHHHHH-cCcEEEEEcCC
Q 041225 102 LLSKDLVGDERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASA-YGYTLFERTSG 180 (658)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~a~~-~g~~~~~~~~~ 180 (658)
..++++.+.++|+.. +.||.++|++++++. .+....
T Consensus 326 ------------~~~~ll~~a~~~s~~--------------------------s~hP~~~AIv~~a~~~~~~~~~----- 362 (679)
T PRK01122 326 ------------TEEELADAAQLSSLA--------------------------DETPEGRSIVVLAKQRFNLRER----- 362 (679)
T ss_pred ------------CHHHHHHHHHHhcCC--------------------------CCCchHHHHHHHHHhhcCCCch-----
Confidence 012345555666421 238999999999986 333210
Q ss_pred eEEEEeCCcEEEEEEEEeeCCCCCCCeeEEEEEcCCCcEEEEEeCCchHhHHhhhcCccccHHHHHHHHHHHHHHhhcCC
Q 041225 181 HIVIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADSSMFNILAKDSKRNDLIRHITQSHLSEYSSQGL 260 (658)
Q Consensus 181 ~~~~~~~g~~~~~~il~~~~F~s~rk~msviv~~~~~~~~l~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 260 (658)
...++.....||++.+++|++.+. + ..|+||+++.+++.|..... ..++.+.+..++++.+|.
T Consensus 363 ---------~~~~~~~~~~pF~s~~~~~gv~~~---g--~~~~kGa~e~il~~~~~~g~---~~~~~~~~~~~~~a~~G~ 425 (679)
T PRK01122 363 ---------DLQSLHATFVPFSAQTRMSGVDLD---G--REIRKGAVDAIRRYVESNGG---HFPAELDAAVDEVARKGG 425 (679)
T ss_pred ---------hhccccceeEeecCcCceEEEEEC---C--EEEEECCHHHHHHHHHhcCC---cChHHHHHHHHHHHhCCC
Confidence 011344567899999988887653 3 57999999999999964321 234567778889999999
Q ss_pred eEEEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEE
Q 041225 261 RTLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVL 340 (658)
Q Consensus 261 r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~ 340 (658)
|++++|+ |++++|.++++|++|++++++|++|+++||+++|+
T Consensus 426 ~~l~va~--------------------------------------~~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMi 467 (679)
T PRK01122 426 TPLVVAE--------------------------------------DNRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMI 467 (679)
T ss_pred cEEEEEE--------------------------------------CCeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEE
Confidence 9999983 57899999999999999999999999999999999
Q ss_pred ecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCC
Q 041225 341 TGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDV 420 (658)
Q Consensus 341 TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (658)
|||+..+|..+|+++|+.
T Consensus 468 TGDn~~TA~aIA~elGId-------------------------------------------------------------- 485 (679)
T PRK01122 468 TGDNPLTAAAIAAEAGVD-------------------------------------------------------------- 485 (679)
T ss_pred CCCCHHHHHHHHHHcCCc--------------------------------------------------------------
Confidence 999999999999999982
Q ss_pred CCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhcCCCeEEEEcCCcCC
Q 041225 421 PQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGAND 500 (658)
Q Consensus 421 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~~~~~v~aiGDg~ND 500 (658)
.+.++.+|++|...|+.+++. ++.|+|+|||.||
T Consensus 486 ---------------------------------------------~v~A~~~PedK~~iV~~lQ~~-G~~VaMtGDGvND 519 (679)
T PRK01122 486 ---------------------------------------------DFLAEATPEDKLALIRQEQAE-GRLVAMTGDGTND 519 (679)
T ss_pred ---------------------------------------------EEEccCCHHHHHHHHHHHHHc-CCeEEEECCCcch
Confidence 157889999999999999998 6799999999999
Q ss_pred hhhhhhcceeEEecCccchhhhhhcccccccccchHHHHhh-hhhhHHHHHHHHHHHHHHHHHH---HHHHHHHHHHhhc
Q 041225 501 VSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLV-HGHWNYQRIGYLVLYNFYRNAV---FVLMLFWYILFTG 576 (658)
Q Consensus 501 i~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~-~gr~~~~~~~~~i~~~~~~~~~---~~~~~~~~~~~~~ 576 (658)
.|+|+.||+|||| |++.+.+|++||+|+.+.++.+.+.++ +||...-.-..+..|++..-+. .++|.++...+..
T Consensus 520 APALa~ADVGIAM-gsGTdvAkeAADiVLldd~~s~Iv~av~~GR~~~~tr~~~~~f~~~n~~~~~~~i~p~~~~~~~~~ 598 (679)
T PRK01122 520 APALAQADVGVAM-NSGTQAAKEAGNMVDLDSNPTKLIEVVEIGKQLLMTRGALTTFSIANDVAKYFAIIPAMFAATYPQ 598 (679)
T ss_pred HHHHHhCCEeEEe-CCCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHhhhHhhhhhhHHHHHHHHHHHHHHHHHhhCcc
Confidence 9999999999999 577788999999999999999999877 8999986666667777765442 4445555544422
Q ss_pred ccc------ccchhhHH-HHHHHHH--HhhhhhhhheecccCCChHHHhhCCcc-cccccc
Q 041225 577 FST------TSALTDWS-SVFYSLL--YTSVPTIVVGIVDKDLSHKTLMQYPKL-YVVQQY 627 (658)
Q Consensus 577 ~s~------~~~~~~~~-~~~~n~~--~~~~p~~~~~~~~~~~~~~~~~~~p~~-y~~~~~ 627 (658)
... .+|.+... -+.||.+ -.++|.-.-|+-+++.+...+++..-+ |-.|..
T Consensus 599 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 659 (679)
T PRK01122 599 LNALNIMHLHSPQSAILSALIFNALIIVALIPLALKGVKYRPLSAAALLRRNLLIYGLGGL 659 (679)
T ss_pred ccccccccCCChHHHHHHHHHHHHHHHHHhHHHHhcCccccccCHHHHHhhceeEecCCce
Confidence 111 12333222 2345533 345677777888999999888866554 777654
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-43 Score=381.39 Aligned_cols=366 Identities=18% Similarity=0.231 Sum_probs=281.9
Q ss_pred CCCeeeeccCCcccccccceEEEeccCcccccceEEEEEEEEcCcccCCchhhHHHHHHHHHhhhccccccccChHHHHH
Q 041225 23 SGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCGKNYGNSLLLAQQVSAAAVRRWKLKSEISVDSKLMEL 102 (658)
Q Consensus 23 ~~~~i~vr~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (658)
.++|+++|++.++|+||++++||||||||||+|+|++.+++..+..
T Consensus 281 ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~~---------------------------------- 326 (675)
T TIGR01497 281 LGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIPAQGV---------------------------------- 326 (675)
T ss_pred HHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEecCCC----------------------------------
Confidence 4678999999999999999999999999999999999988643210
Q ss_pred HhhccCcchhHHHHHHHHHHhhccceeecCCCCCCCCCCCCcccCCcceeeecCChhHHHHHHHHHHcCcEEEEEcCCeE
Q 041225 103 LSKDLVGDERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYTLFERTSGHI 182 (658)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~~ 182 (658)
...+++.+.++|+. .+.||.++|+++++++.|.....
T Consensus 327 -----------~~~~ll~~aa~~~~--------------------------~s~hP~a~Aiv~~a~~~~~~~~~------ 363 (675)
T TIGR01497 327 -----------DEKTLADAAQLASL--------------------------ADDTPEGKSIVILAKQLGIREDD------ 363 (675)
T ss_pred -----------cHHHHHHHHHHhcC--------------------------CCCCcHHHHHHHHHHHcCCCccc------
Confidence 01234555556642 12489999999999887653211
Q ss_pred EEEeCCcEEEEEEEEeeCCCCCCCeeEEEEEcCCCcEEEEEeCCchHhHHhhhcCccccHHHHHHHHHHHHHHhhcCCeE
Q 041225 183 VIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADSSMFNILAKDSKRNDLIRHITQSHLSEYSSQGLRT 262 (658)
Q Consensus 183 ~~~~~g~~~~~~il~~~~F~s~rk~msviv~~~~~~~~l~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~ 262 (658)
...+.....||++.+++|++.+. ++ ..++||+++.+++.|..... ..+..+.+.+++++.+|.|+
T Consensus 364 --------~~~~~~~~~pf~~~~~~sg~~~~--~g--~~~~kGa~e~i~~~~~~~g~---~~~~~~~~~~~~~a~~G~r~ 428 (675)
T TIGR01497 364 --------VQSLHATFVEFTAQTRMSGINLD--NG--RMIRKGAVDAIKRHVEANGG---HIPTDLDQAVDQVARQGGTP 428 (675)
T ss_pred --------cccccceEEEEcCCCcEEEEEEe--CC--eEEEECCHHHHHHHHHhcCC---CCcHHHHHHHHHHHhCCCeE
Confidence 11234567899999877776543 33 57899999999998863221 12345677788999999999
Q ss_pred EEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEec
Q 041225 263 LVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTG 342 (658)
Q Consensus 263 l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TG 342 (658)
+++|+ |++++|.+++.|++||+++++|++|+++|++++|+||
T Consensus 429 l~va~--------------------------------------~~~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTG 470 (675)
T TIGR01497 429 LVVCE--------------------------------------DNRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITG 470 (675)
T ss_pred EEEEE--------------------------------------CCEEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcC
Confidence 99995 3589999999999999999999999999999999999
Q ss_pred CChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCC
Q 041225 343 DKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQ 422 (658)
Q Consensus 343 r~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (658)
|+..+|..+|+++|+.
T Consensus 471 D~~~ta~~iA~~lGI~---------------------------------------------------------------- 486 (675)
T TIGR01497 471 DNRLTAAAIAAEAGVD---------------------------------------------------------------- 486 (675)
T ss_pred CCHHHHHHHHHHcCCC----------------------------------------------------------------
Confidence 9999999999999982
Q ss_pred CCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhcCCCeEEEEcCCcCChh
Q 041225 423 GHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVS 502 (658)
Q Consensus 423 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~~~~~v~aiGDg~NDi~ 502 (658)
.+.++.+|.+|...++.+++. +..|+|+|||.||.|
T Consensus 487 -------------------------------------------~v~a~~~PedK~~~v~~lq~~-g~~VamvGDG~NDap 522 (675)
T TIGR01497 487 -------------------------------------------DFIAEATPEDKIALIRQEQAE-GKLVAMTGDGTNDAP 522 (675)
T ss_pred -------------------------------------------EEEcCCCHHHHHHHHHHHHHc-CCeEEEECCCcchHH
Confidence 145788999999999999987 578999999999999
Q ss_pred hhhhcceeEEecCccchhhhhhcccccccccchHHHHhh-hhhhHHHHHHHHHHHHHHHHHHHHH---HHHHHHHhhcc-
Q 041225 503 MIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLV-HGHWNYQRIGYLVLYNFYRNAVFVL---MLFWYILFTGF- 577 (658)
Q Consensus 503 Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~-~gr~~~~~~~~~i~~~~~~~~~~~~---~~~~~~~~~~~- 577 (658)
||+.||+|||| +++.+.++++||+++.+.++.+...++ +||..+-....+..|++...+.-.| |..|...+...
T Consensus 523 AL~~AdvGiAm-~~gt~~akeaadivLldd~~s~Iv~av~~GR~~~~t~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 601 (675)
T TIGR01497 523 ALAQADVGVAM-NSGTQAAKEAANMVDLDSDPTKLIEVVHIGKQLLITRGALTTFSIANDVAKYFAIIPAIFAAAYPQLQ 601 (675)
T ss_pred HHHhCCEeEEe-CCCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHheeeecccHHHHHHHHHHHHHhhCcchh
Confidence 99999999999 567777999999999999999999877 8999999989999998777664333 33333333111
Q ss_pred -----ccccchhhHH-HHHHHHH--HhhhhhhhheecccCCChHHHhhCCcc-cccccc
Q 041225 578 -----STTSALTDWS-SVFYSLL--YTSVPTIVVGIVDKDLSHKTLMQYPKL-YVVQQY 627 (658)
Q Consensus 578 -----s~~~~~~~~~-~~~~n~~--~~~~p~~~~~~~~~~~~~~~~~~~p~~-y~~~~~ 627 (658)
.-.+|.+... -+.||.+ -.+.|.-.-|+-+++.+...+++..-+ |-.|..
T Consensus 602 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 660 (675)
T TIGR01497 602 ALNIMCLHSPDSAILSALIFNALIIPALIPLALKGVSYRPLTASALLRRNLWIYGLGGL 660 (675)
T ss_pred hhccccCCChHHHHHHHHHHHHHHHHHhHHHHhcCcccccCCHHHHHhhceEEecCCce
Confidence 1112333222 2345533 335667777888999999888766544 666654
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-39 Score=349.08 Aligned_cols=270 Identities=38% Similarity=0.572 Sum_probs=232.7
Q ss_pred CCeeeeccCCcccccccceEEEeccCcccccceEEEEEEEEcCcccCCchhhHHHHHHHHHhhhccccccccChHHHHHH
Q 041225 24 GSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCGKNYGNSLLLAQQVSAAAVRRWKLKSEISVDSKLMELL 103 (658)
Q Consensus 24 ~~~i~vr~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (658)
++||++|+++++|+||++++||||||||||+|+|+|.++++.+.
T Consensus 213 ~~gilvk~~~~lE~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~------------------------------------ 256 (499)
T TIGR01494 213 KKGIVVRSLNALEELGKVDYICSDKTGTLTKNEMSFKKVSVLGG------------------------------------ 256 (499)
T ss_pred HCCcEEechhhhhhccCCcEEEeeCCCccccCceEEEEEEecCC------------------------------------
Confidence 45899999999999999999999999999999999999875431
Q ss_pred hhccCcchhHHHHHHHHHHhhccceeecCCCCCCCCCCCCcccCCcceeeecCChhHHHHHHHHHHcCcEEEEEcCCeEE
Q 041225 104 SKDLVGDERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYTLFERTSGHIV 183 (658)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~~~ 183 (658)
++.++||+|.|++++++..+
T Consensus 257 ------------------------------------------------~~~s~hp~~~ai~~~~~~~~------------ 276 (499)
T TIGR01494 257 ------------------------------------------------EYLSGHPDERALVKSAKWKI------------ 276 (499)
T ss_pred ------------------------------------------------CcCCCChHHHHHHHHhhhcC------------
Confidence 12345999999999986421
Q ss_pred EEeCCcEEEEEEEEeeCCCCCCCeeEEEEEcCCCcEEEEEeCCchHhHHhhhcCccccHHHHHHHHHHHHHHhhcCCeEE
Q 041225 184 IDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADSSMFNILAKDSKRNDLIRHITQSHLSEYSSQGLRTL 263 (658)
Q Consensus 184 ~~~~g~~~~~~il~~~~F~s~rk~msviv~~~~~~~~l~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l 263 (658)
+...||++.+++|+++++.+++ .|+||+++.+.+.|.. +.+.++.++.+|+|++
T Consensus 277 ------------~~~~~f~~~~~~~~~~~~~~~~---~~~~G~~~~i~~~~~~-----------~~~~~~~~~~~g~~~~ 330 (499)
T TIGR01494 277 ------------LNVFEFSSVRKRMSVIVRGPDG---TYVKGAPEFVLSRVKD-----------LEEKVKELAQSGLRVL 330 (499)
T ss_pred ------------cceeccCCCCceEEEEEecCCc---EEEeCCHHHHHHhhHH-----------HHHHHHHHHhCCCEEE
Confidence 2357999999999999997544 4789999999998853 2234456788999999
Q ss_pred EEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecC
Q 041225 264 VVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGD 343 (658)
Q Consensus 264 ~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr 343 (658)
++|++. +++|.++++|++++++.++|+.|+++|++++|+|||
T Consensus 331 ~~a~~~--------------------------------------~~~g~i~l~d~lr~~~~~~i~~l~~~gi~~~~ltGD 372 (499)
T TIGR01494 331 AVASKE--------------------------------------TLLGLLGLEDPLRDDAKETISELREAGIRVIMLTGD 372 (499)
T ss_pred EEEECC--------------------------------------eEEEEEEecCCCchhHHHHHHHHHHCCCeEEEEcCC
Confidence 999753 699999999999999999999999999999999999
Q ss_pred ChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCC
Q 041225 344 KQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQG 423 (658)
Q Consensus 344 ~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (658)
+..++..+|+++|+
T Consensus 373 ~~~~a~~ia~~lgi------------------------------------------------------------------ 386 (499)
T TIGR01494 373 NVLTAKAIAKELGI------------------------------------------------------------------ 386 (499)
T ss_pred CHHHHHHHHHHcCc------------------------------------------------------------------
Confidence 99999999999874
Q ss_pred CchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhcCCCeEEEEcCCcCChhh
Q 041225 424 HDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSM 503 (658)
Q Consensus 424 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~~~~~v~aiGDg~NDi~M 503 (658)
+++..|.+|...++.+++. +..|+++|||.||.+|
T Consensus 387 --------------------------------------------~~~~~p~~K~~~v~~l~~~-g~~v~~vGDg~nD~~a 421 (499)
T TIGR01494 387 --------------------------------------------FARVTPEEKAALVEALQKK-GRVVAMTGDGVNDAPA 421 (499)
T ss_pred --------------------------------------------eeccCHHHHHHHHHHHHHC-CCEEEEECCChhhHHH
Confidence 2446789999999999887 5789999999999999
Q ss_pred hhhcceeEEecCccchhhhhhcccccccccchHHHHhh-hhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 041225 504 IQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLV-HGHWNYQRIGYLVLYNFYRNAVFVLMLFW 570 (658)
Q Consensus 504 l~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~-~gr~~~~~~~~~i~~~~~~~~~~~~~~~~ 570 (658)
|+.||+|||| + ++.+||+++.++++.....++ +||..+.++++.+.|.+++|+..+.+.++
T Consensus 422 l~~Advgia~-~-----a~~~adivl~~~~l~~i~~~~~~~r~~~~~i~~~~~~~~~~n~~~~~~a~~ 483 (499)
T TIGR01494 422 LKKADVGIAM-G-----AKAAADIVLLDDNLSTIVDALKEGRKTFSTIKSNIFWAIAYNLILIPLAAL 483 (499)
T ss_pred HHhCCCcccc-c-----hHHhCCeEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999 4 688899999998887777665 99999999999999999999987766655
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-39 Score=338.51 Aligned_cols=369 Identities=26% Similarity=0.310 Sum_probs=261.6
Q ss_pred CCeeeeccCCcccccccceEEEeccCcccccceEEEEEEEEcCcccCCchhhHHHHHHHHHhhhccccccccChHHHHHH
Q 041225 24 GSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCGKNYGNSLLLAQQVSAAAVRRWKLKSEISVDSKLMELL 103 (658)
Q Consensus 24 ~~~i~vr~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (658)
+.+|.|..+--+-=.|+||+-|||||||||+..|.|.++--.....+.-
T Consensus 462 k~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~~~~~~------------------------------- 510 (1160)
T KOG0209|consen 462 KLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSADEGAL------------------------------- 510 (1160)
T ss_pred HhceeecCccccccCCceeEEEecCCCccccccEEEEecccccCCcccc-------------------------------
Confidence 5577888888888899999999999999999999999974322111100
Q ss_pred hhccCcchhHHHHHHHHHHhhccceeecCCCCCCCCCCCCcccCCcceeeecCChhHHHHHHHHHHcCcEEEEEcCCeEE
Q 041225 104 SKDLVGDERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYTLFERTSGHIV 183 (658)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~~~ 183 (658)
.+-+....+-++++|.||+.....++ .-++|.|+|.++.. ||.+...+. +
T Consensus 511 -----~~~s~~p~~t~~vlAscHsLv~le~~-------------------lVGDPlEKA~l~~v---~W~~~k~~~---v 560 (1160)
T KOG0209|consen 511 -----TPASKAPNETVLVLASCHSLVLLEDK-------------------LVGDPLEKATLEAV---GWNLEKKNS---V 560 (1160)
T ss_pred -----cchhhCCchHHHHHHHHHHHHHhcCc-------------------ccCChHHHHHHHhc---CcccccCcc---c
Confidence 00011224467899999988664322 22499999998864 676654332 3
Q ss_pred EEeCCcEEEEEEEEeeCCCCCCCeeEEEEEcCC----CcEEEEEeCCchHhHHhhhcCccccHHHHHHHHHHHHHHhhcC
Q 041225 184 IDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPD----NSVKVLVKGADSSMFNILAKDSKRNDLIRHITQSHLSEYSSQG 259 (658)
Q Consensus 184 ~~~~g~~~~~~il~~~~F~s~rk~msviv~~~~----~~~~l~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 259 (658)
..-.|.....+|++.+.|+|..||||||+.... -.+++.+|||||.|.+++.. ++..+++...+++++|
T Consensus 561 ~p~~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi~~ml~d-------vP~dY~~iYk~ytR~G 633 (1160)
T KOG0209|consen 561 CPREGNGKKLKIIQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPEVIQEMLRD-------VPKDYDEIYKRYTRQG 633 (1160)
T ss_pred CCCcCCCcccchhhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHHHHHHHHHh-------CchhHHHHHHHHhhcc
Confidence 333455557889999999999999999998753 25788999999999999885 4677888999999999
Q ss_pred CeEEEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEE
Q 041225 260 LRTLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWV 339 (658)
Q Consensus 260 ~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i 339 (658)
.|||+++||.+..-...+ .-+.....+|.|+||.|.+-+.-+++++++++|+.|++.+++++|
T Consensus 634 sRVLALg~K~l~~~~~~q-----------------~rd~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~~SSH~vvM 696 (1160)
T KOG0209|consen 634 SRVLALGYKPLGDMMVSQ-----------------VRDLKREDVESDLTFAGFLIFSCPLKPDSKKTIKELNNSSHRVVM 696 (1160)
T ss_pred ceEEEEecccccccchhh-----------------hhhhhhhhhhhcceeeeeEEEeCCCCccHHHHHHHHhccCceEEE
Confidence 999999999997322111 111244568999999999999999999999999999999999999
Q ss_pred EecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCC-
Q 041225 340 LTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFS- 418 (658)
Q Consensus 340 ~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 418 (658)
+|||++-||.++|+++|++.....++...+... .....+. +....+.
T Consensus 697 ITGDnpLTAchVak~v~iv~k~~~vl~~~~~~~--------------------~~~~~w~------------s~d~t~~l 744 (1160)
T KOG0209|consen 697 ITGDNPLTACHVAKEVGIVEKPTLVLDLPEEGD--------------------GNQLEWV------------SVDGTIVL 744 (1160)
T ss_pred EeCCCccchheehheeeeeccCceeeccCccCC--------------------CceeeEe------------cCCCceee
Confidence 999999999999999999865433332221100 0000000 0000000
Q ss_pred CCCCCCchhhhhccCcEEEEEeCccHHHHHHHh-hHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhcCCCeEEEEcCC
Q 041225 419 DVPQGHDVKEVAAIASLALIIDGNSLVYILEKD-LESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDG 497 (658)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~~~~~v~aiGDg 497 (658)
......... .-.....+.++|..+....... +..... ..+|++|+.|.||-.+|..+++. +..++|+|||
T Consensus 745 p~~p~~~~~--~l~~~~dlcitG~~l~~l~~~~~l~~l~~------hv~VfARvaP~QKE~ii~tlK~~-Gy~TLMCGDG 815 (1160)
T KOG0209|consen 745 PLKPGKKKT--LLAETHDLCITGSALDHLQATDQLRRLIP------HVWVFARVAPKQKEFIITTLKKL-GYVTLMCGDG 815 (1160)
T ss_pred cCCCCccch--hhhhhhhhhcchhHHHHHhhhHHHHHhhh------heeEEEeeChhhHHHHHHHHHhc-CeEEEEecCC
Confidence 000000000 0011223456777776665543 221111 26799999999999999999998 6899999999
Q ss_pred cCChhhhhhcceeEEecCccc
Q 041225 498 ANDVSMIQMADVGVGICGQEG 518 (658)
Q Consensus 498 ~NDi~Ml~~A~vgIam~~~~~ 518 (658)
.||+.+||.||+|||.-++..
T Consensus 816 TNDVGALK~AhVGVALL~~~~ 836 (1160)
T KOG0209|consen 816 TNDVGALKQAHVGVALLNNPE 836 (1160)
T ss_pred CcchhhhhhcccceehhcCCh
Confidence 999999999999999855443
|
|
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-37 Score=333.25 Aligned_cols=295 Identities=26% Similarity=0.306 Sum_probs=230.7
Q ss_pred CCCeeeeccCCcccccccceEEEeccCcccccceEEEEEEEEcCcccCCchhhHHHHHHHHHhhhccccccccChHHHHH
Q 041225 23 SGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCGKNYGNSLLLAQQVSAAAVRRWKLKSEISVDSKLMEL 102 (658)
Q Consensus 23 ~~~~i~vr~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (658)
.++||++|+..++|.|+++|+|+||||||||+|++.+..+...+. ..
T Consensus 387 A~~GILiK~g~~LE~l~~v~tvvFDKTGTLT~G~p~v~~v~~~~~--~e------------------------------- 433 (713)
T COG2217 387 ARRGILIKGGEALERLAKVDTVVFDKTGTLTEGKPEVTDVVALDG--DE------------------------------- 433 (713)
T ss_pred HhCceEEeChHHHHhhccCCEEEEeCCCCCcCCceEEEEEecCCC--CH-------------------------------
Confidence 468999999999999999999999999999999999999875542 10
Q ss_pred HhhccCcchhHHHHHHHHHHhhccceeecCCCCCCCCCCCCcccCCcceeeecCChhHHHHHHHHHHcCcEEEEEcCCeE
Q 041225 103 LSKDLVGDERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYTLFERTSGHI 182 (658)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~~ 182 (658)
.++ +.+ ...++..|.||+.+|+++++...|..-.. .
T Consensus 434 -------------~~~-L~l-------------------------aAalE~~S~HPiA~AIv~~a~~~~~~~~~--~--- 469 (713)
T COG2217 434 -------------DEL-LAL-------------------------AAALEQHSEHPLAKAIVKAAAERGLPDVE--D--- 469 (713)
T ss_pred -------------HHH-HHH-------------------------HHHHHhcCCChHHHHHHHHHHhcCCCCcc--c---
Confidence 011 111 12345667899999999999987721111 1
Q ss_pred EEEeCCcEEEEEEEEeeCCCCCCCeeEEEEEcCCCcEEEEEeCCchHhHHhhhcCccccHHHHHHHHHHHHHHhhcCCeE
Q 041225 183 VIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADSSMFNILAKDSKRNDLIRHITQSHLSEYSSQGLRT 262 (658)
Q Consensus 183 ~~~~~g~~~~~~il~~~~F~s~rk~msviv~~~~~~~~l~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~ 262 (658)
+..+.|.+.+.++- | ..+.-|.+.-+.+.-... .. .....+.+..+|..+
T Consensus 470 ~~~i~G~Gv~~~v~--------------------g--~~v~vG~~~~~~~~~~~~-------~~-~~~~~~~~~~~G~t~ 519 (713)
T COG2217 470 FEEIPGRGVEAEVD--------------------G--ERVLVGNARLLGEEGIDL-------PL-LSERIEALESEGKTV 519 (713)
T ss_pred eeeeccCcEEEEEC--------------------C--EEEEEcCHHHHhhcCCCc-------cc-hhhhHHHHHhcCCeE
Confidence 55677777766441 1 233445554442211100 00 233344555566554
Q ss_pred EEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEec
Q 041225 263 LVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTG 342 (658)
Q Consensus 263 l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TG 342 (658)
+.+ -.||.++|.+.+.|++|++++++|++|++.|++++|+||
T Consensus 520 v~v--------------------------------------a~dg~~~g~i~~~D~~R~~a~~aI~~L~~~Gi~~~mLTG 561 (713)
T COG2217 520 VFV--------------------------------------AVDGKLVGVIALADELRPDAKEAIAALKALGIKVVMLTG 561 (713)
T ss_pred EEE--------------------------------------EECCEEEEEEEEeCCCChhHHHHHHHHHHCCCeEEEEcC
Confidence 444 478999999999999999999999999999999999999
Q ss_pred CChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCC
Q 041225 343 DKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQ 422 (658)
Q Consensus 343 r~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (658)
|+..+|..+|+++|+..
T Consensus 562 Dn~~~A~~iA~~lGId~--------------------------------------------------------------- 578 (713)
T COG2217 562 DNRRTAEAIAKELGIDE--------------------------------------------------------------- 578 (713)
T ss_pred CCHHHHHHHHHHcChHh---------------------------------------------------------------
Confidence 99999999999999821
Q ss_pred CCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhcCCCeEEEEcCCcCChh
Q 041225 423 GHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVS 502 (658)
Q Consensus 423 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~~~~~v~aiGDg~NDi~ 502 (658)
+.....|++|...|+.|++. +..|+|+|||.||.|
T Consensus 579 --------------------------------------------v~AellPedK~~~V~~l~~~-g~~VamVGDGINDAP 613 (713)
T COG2217 579 --------------------------------------------VRAELLPEDKAEIVRELQAE-GRKVAMVGDGINDAP 613 (713)
T ss_pred --------------------------------------------heccCCcHHHHHHHHHHHhc-CCEEEEEeCCchhHH
Confidence 46778899999999999987 589999999999999
Q ss_pred hhhhcceeEEecCccchhhhhhcccccccccchHHHHhh-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 041225 503 MIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLV-HGHWNYQRIGYLVLYNFYRNAVFVLMLFWY 571 (658)
Q Consensus 503 Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~-~gr~~~~~~~~~i~~~~~~~~~~~~~~~~~ 571 (658)
+|..||+|||| |.+.+.++++||+++.+.+......++ .+|....+++..+.|.|.+|.+++.+..+.
T Consensus 614 ALA~AdVGiAm-G~GtDvA~eaADvvL~~~dL~~v~~ai~lsr~t~~~IkqNl~~A~~yn~~~iplA~~g 682 (713)
T COG2217 614 ALAAADVGIAM-GSGTDVAIEAADVVLMRDDLSAVPEAIDLSRATRRIIKQNLFWAFGYNAIAIPLAAGG 682 (713)
T ss_pred HHhhcCeeEee-cCCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999 667777999999999999998888777 799999999999999999999887665443
|
|
| >KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-36 Score=305.93 Aligned_cols=346 Identities=21% Similarity=0.291 Sum_probs=262.9
Q ss_pred CCCCeeeeccCCcccccccceEEEeccCcccccceEEEEE--E--EEcCcccCCchhhHHHHHHHHHhhhccccccccCh
Q 041225 22 SSGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQR--A--SVCGKNYGNSLLLAQQVSAAAVRRWKLKSEISVDS 97 (658)
Q Consensus 22 ~~~~~i~vr~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (658)
.+++++++++++++|+|+.++++|||||||||-|++++.+ + +..|.+ +
T Consensus 308 LaqqgAItkrmtAIEemAGmdVLCSDKTGTLTlNkLSvdknl~ev~v~gv~----------------------------~ 359 (942)
T KOG0205|consen 308 LSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFVKGVD----------------------------K 359 (942)
T ss_pred HHhcccHHHHHHHHHHhhCceEEeecCcCceeecceecCcCcceeeecCCC----------------------------h
Confidence 4578999999999999999999999999999999999987 2 332311 0
Q ss_pred HHHHHHhhccCcchhHHHHHHHHHHhhccceeecCCCCCCCCCCCCcccCCcceeeecCChhHHHHHHHHHHcCcEEEEE
Q 041225 98 KLMELLSKDLVGDERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYTLFER 177 (658)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~ 177 (658)
..+++..+... ...+.+.+|.|++...++-
T Consensus 360 ------------------D~~~L~A~rAs-------------------------r~en~DAID~A~v~~L~dP------- 389 (942)
T KOG0205|consen 360 ------------------DDVLLTAARAS-------------------------RKENQDAIDAAIVGMLADP------- 389 (942)
T ss_pred ------------------HHHHHHHHHHh-------------------------hhcChhhHHHHHHHhhcCH-------
Confidence 01112111111 1123478899998875431
Q ss_pred cCCeEEEEeCCcEEEEEEEEeeCCCCCCCeeEEEEEcCCCcEEEEEeCCchHhHHhhhcCccccHHHHHHHHHHHHHHhh
Q 041225 178 TSGHIVIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADSSMFNILAKDSKRNDLIRHITQSHLSEYSS 257 (658)
Q Consensus 178 ~~~~~~~~~~g~~~~~~il~~~~F~s~rk~msviv~~~~~~~~l~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (658)
...+-.++.++.+||++..||....+.+++|+.+..+||||+.|++.|.... .+++..-..+++|++
T Consensus 390 ---------Keara~ikevhF~PFnPV~Krta~ty~d~dG~~~r~sKGAPeqil~l~~~~~----~i~~~vh~~id~~Ae 456 (942)
T KOG0205|consen 390 ---------KEARAGIKEVHFLPFNPVDKRTALTYIDPDGNWHRVSKGAPEQILKLCNEDH----DIPERVHSIIDKFAE 456 (942)
T ss_pred ---------HHHhhCceEEeeccCCccccceEEEEECCCCCEEEecCCChHHHHHHhhccC----cchHHHHHHHHHHHH
Confidence 1233467889999999999999999999999999999999999999998643 467788888899999
Q ss_pred cCCeEEEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeE
Q 041225 258 QGLRTLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKV 337 (658)
Q Consensus 258 ~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v 337 (658)
+|+|.+++|++..++..-. .-..-..++|..-+-|+++.++.++|++....|+.|
T Consensus 457 RGlRSLgVArq~v~e~~~~-------------------------~~g~pw~~~gllp~fdpprhdsa~tirral~lGv~V 511 (942)
T KOG0205|consen 457 RGLRSLAVARQEVPEKTKE-------------------------SPGGPWEFVGLLPLFDPPRHDSAETIRRALNLGVNV 511 (942)
T ss_pred hcchhhhhhhhcccccccc-------------------------CCCCCcccccccccCCCCccchHHHHHHHHhcccee
Confidence 9999999999988765210 011234788888889999999999999999999999
Q ss_pred EEEecCChhHHHHHHHHcCccCC---CccEEEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcC
Q 041225 338 WVLTGDKQDTAISIALSCKLLTP---DMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISND 414 (658)
Q Consensus 338 ~i~TGr~~~~a~~ia~~~gl~~~---~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (658)
-|+|||...-+...++++|+-.. ....+..++.
T Consensus 512 kmitgdqlaI~keTgrrlgmgtnmypss~llG~~~~-------------------------------------------- 547 (942)
T KOG0205|consen 512 KMITGDQLAIAKETGRRLGMGTNMYPSSALLGLGKD-------------------------------------------- 547 (942)
T ss_pred eeecchHHHHHHhhhhhhccccCcCCchhhccCCCC--------------------------------------------
Confidence 99999999999999999987432 0100000000
Q ss_pred CCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhcCCCeEEEE
Q 041225 415 AKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAI 494 (658)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~~~~~v~ai 494 (658)
.. ..+....+.+++ .-=+..+-|.+|..+|+.|+++ +..+.+.
T Consensus 548 -------~~---------------~~~~~v~elie~--------------adgfAgVfpehKy~iV~~Lq~r-~hi~gmt 590 (942)
T KOG0205|consen 548 -------GS---------------MPGSPVDELIEK--------------ADGFAGVFPEHKYEIVKILQER-KHIVGMT 590 (942)
T ss_pred -------CC---------------CCCCcHHHHhhh--------------ccCccccCHHHHHHHHHHHhhc-Cceeccc
Confidence 00 000011111111 1125667799999999999998 6899999
Q ss_pred cCCcCChhhhhhcceeEEecCccchhhhhhcccccccccchHHHHhh-hhhhHHHHHHHHHHHHHHHHHHHH
Q 041225 495 GDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLV-HGHWNYQRIGYLVLYNFYRNAVFV 565 (658)
Q Consensus 495 GDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~-~gr~~~~~~~~~i~~~~~~~~~~~ 565 (658)
|||.||.|+|+.||+|||+ ..+.+.+..+||+|+.......++..+ .+|.+|+|++.+..|.+.-.+-+.
T Consensus 591 gdgvndapaLKkAdigiav-a~atdaar~asdiVltepglSviI~avltSraIfqrmknytiyavsitiriv 661 (942)
T KOG0205|consen 591 GDGVNDAPALKKADIGIAV-ADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV 661 (942)
T ss_pred CCCcccchhhcccccceee-ccchhhhcccccEEEcCCCchhhHHHHHHHHHHHHHHhhheeeeehhHHHHH
Confidence 9999999999999999999 556667899999999999988888766 899999999999888776665444
|
|
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-35 Score=327.30 Aligned_cols=289 Identities=21% Similarity=0.256 Sum_probs=223.2
Q ss_pred CCCeeeeccCCcccccccceEEEeccCcccccceEEEEEEEEcCcccCCchhhHHHHHHHHHhhhccccccccChHHHHH
Q 041225 23 SGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCGKNYGNSLLLAQQVSAAAVRRWKLKSEISVDSKLMEL 102 (658)
Q Consensus 23 ~~~~i~vr~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (658)
.++||++|+..++|+|+++++||||||||||+|+|+|.++...+.. .
T Consensus 418 ar~gilik~~~alE~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~~-~-------------------------------- 464 (741)
T PRK11033 418 ARRGALIKGGAALEQLGRVTTVAFDKTGTLTEGKPQVTDIHPATGI-S-------------------------------- 464 (741)
T ss_pred HHCCeEEcCcHHHHHhhCCCEEEEeCCCCCcCCceEEEEEEecCCC-C--------------------------------
Confidence 4779999999999999999999999999999999999998653311 0
Q ss_pred HhhccCcchhHHHHHHHHHHhhccceeecCCCCCCCCCCCCcccCCcceeeecCChhHHHHHHHHHHcCcEEEEEcCCeE
Q 041225 103 LSKDLVGDERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYTLFERTSGHI 182 (658)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~~ 182 (658)
..+++...+ ..+..+.||.++|+++++...+..
T Consensus 465 ------------~~~~l~~aa--------------------------~~e~~s~hPia~Ai~~~a~~~~~~--------- 497 (741)
T PRK11033 465 ------------ESELLALAA--------------------------AVEQGSTHPLAQAIVREAQVRGLA--------- 497 (741)
T ss_pred ------------HHHHHHHHH--------------------------HHhcCCCCHHHHHHHHHHHhcCCC---------
Confidence 011111111 112234699999999999876543
Q ss_pred EEEeCCcEEEEEEEEeeCCCCCCCeeE-EEEE-cCCCcEEEEEeCCchHhHHhhhcCccccHHHHHHHHHHHHHHhhcCC
Q 041225 183 VIDINGEGLRLDVLGLHEFDSVRKRMS-VVIR-FPDNSVKVLVKGADSSMFNILAKDSKRNDLIRHITQSHLSEYSSQGL 260 (658)
Q Consensus 183 ~~~~~g~~~~~~il~~~~F~s~rk~ms-viv~-~~~~~~~l~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 260 (658)
+||.++++.+. .-++ .-+|.. +.-|+++.+.+ ..+.+...++.+..+|.
T Consensus 498 ----------------~~~~~~~~~~~g~Gv~~~~~g~~--~~ig~~~~~~~-----------~~~~~~~~~~~~~~~g~ 548 (741)
T PRK11033 498 ----------------IPEAESQRALAGSGIEGQVNGER--VLICAPGKLPP-----------LADAFAGQINELESAGK 548 (741)
T ss_pred ----------------CCCCcceEEEeeEEEEEEECCEE--EEEecchhhhh-----------ccHHHHHHHHHHHhCCC
Confidence 23444444431 1111 112322 23477776643 11234445678889999
Q ss_pred eEEEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEE
Q 041225 261 RTLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVL 340 (658)
Q Consensus 261 r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~ 340 (658)
+++++++ |++++|.++++|+++++++++|++|+++|++++|+
T Consensus 549 ~~v~va~--------------------------------------~~~~~g~i~l~d~~r~~a~~~i~~L~~~gi~~~ll 590 (741)
T PRK11033 549 TVVLVLR--------------------------------------NDDVLGLIALQDTLRADARQAISELKALGIKGVML 590 (741)
T ss_pred EEEEEEE--------------------------------------CCEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEE
Confidence 9999984 57899999999999999999999999999999999
Q ss_pred ecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCC
Q 041225 341 TGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDV 420 (658)
Q Consensus 341 TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (658)
|||+..++..+++++|+..
T Consensus 591 TGd~~~~a~~ia~~lgi~~------------------------------------------------------------- 609 (741)
T PRK11033 591 TGDNPRAAAAIAGELGIDF------------------------------------------------------------- 609 (741)
T ss_pred cCCCHHHHHHHHHHcCCCe-------------------------------------------------------------
Confidence 9999999999999999821
Q ss_pred CCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhcCCCeEEEEcCCcCC
Q 041225 421 PQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGAND 500 (658)
Q Consensus 421 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~~~~~v~aiGDg~ND 500 (658)
.....|.+|..+++.+++. ..|+|+|||.||
T Consensus 610 -----------------------------------------------~~~~~p~~K~~~v~~l~~~--~~v~mvGDgiND 640 (741)
T PRK11033 610 -----------------------------------------------RAGLLPEDKVKAVTELNQH--APLAMVGDGIND 640 (741)
T ss_pred -----------------------------------------------ecCCCHHHHHHHHHHHhcC--CCEEEEECCHHh
Confidence 1235688999999999864 589999999999
Q ss_pred hhhhhhcceeEEecCccchhhhhhcccccccccchHHHHhh-hhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 041225 501 VSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLV-HGHWNYQRIGYLVLYNFYRNAVFVLMLF 569 (658)
Q Consensus 501 i~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~-~gr~~~~~~~~~i~~~~~~~~~~~~~~~ 569 (658)
.|||+.||+||+| +++.+.++++||+++.+.++.....++ .||..+.++++.+.|.+..|++++.+.+
T Consensus 641 apAl~~A~vgia~-g~~~~~a~~~adivl~~~~l~~l~~~i~~sr~~~~~I~~nl~~a~~~n~~~i~~a~ 709 (741)
T PRK11033 641 APAMKAASIGIAM-GSGTDVALETADAALTHNRLRGLAQMIELSRATHANIRQNITIALGLKAIFLVTTL 709 (741)
T ss_pred HHHHHhCCeeEEe-cCCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999 567777899999999988887777666 8999999999999999999987665543
|
|
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-33 Score=301.48 Aligned_cols=335 Identities=22% Similarity=0.225 Sum_probs=238.2
Q ss_pred CCCeeeeccCCcccccccceEEEeccCcccccceEEEEEEEEcCcccCCchhhHHHHHHHHHhhhccccccccChHHHHH
Q 041225 23 SGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCGKNYGNSLLLAQQVSAAAVRRWKLKSEISVDSKLMEL 102 (658)
Q Consensus 23 ~~~~i~vr~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (658)
..+|+|+|..+.+|.+.+|++|+||||||||+|++.|.++...+....
T Consensus 564 A~nGvLIKGge~LE~~hkv~tVvFDKTGTLT~G~~~V~~~~~~~~~~~-------------------------------- 611 (951)
T KOG0207|consen 564 ATNGVLIKGGEALEKAHKVKTVVFDKTGTLTEGKPTVVDFKSLSNPIS-------------------------------- 611 (951)
T ss_pred hhcceEEcCcHHHHHHhcCCEEEEcCCCceecceEEEEEEEecCCccc--------------------------------
Confidence 368999999999999999999999999999999999999877654311
Q ss_pred HhhccCcchhHHHHHHHHHHhhccceeecCCCCCCCCCCCCcccCCcceeeecCChhHHHHHHHHHHcCcEEEEEcCCeE
Q 041225 103 LSKDLVGDERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYTLFERTSGHI 182 (658)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~~ 182 (658)
.++++-.. +..|..+.||...|+++||+......... ...-
T Consensus 612 ------------~~e~l~~v--------------------------~a~Es~SeHPig~AIv~yak~~~~~~~~~-~~~~ 652 (951)
T KOG0207|consen 612 ------------LKEALALV--------------------------AAMESGSEHPIGKAIVDYAKEKLVEPNPE-GVLS 652 (951)
T ss_pred ------------HHHHHHHH--------------------------HHHhcCCcCchHHHHHHHHHhcccccCcc-ccce
Confidence 11111111 22344567999999999999876111000 0000
Q ss_pred EEEeCCcEEEEEEEEeeCCCCCCCeeEEEEEcCCCcEEEEEeCCchHhHHhhhcCccccHHHHHHHHHHHHHHhhcCCeE
Q 041225 183 VIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADSSMFNILAKDSKRNDLIRHITQSHLSEYSSQGLRT 262 (658)
Q Consensus 183 ~~~~~g~~~~~~il~~~~F~s~rk~msviv~~~~~~~~l~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~ 262 (658)
+-..+|++ ....+.+. ..+ .+=|.-+-|...-.. ..+.++..+++....|..+
T Consensus 653 ~~~~pg~g---------------~~~~~~~~--~~~---i~iGN~~~~~r~~~~-------~~~~i~~~~~~~e~~g~tv 705 (951)
T KOG0207|consen 653 FEYFPGEG---------------IYVTVTVD--GNE---VLIGNKEWMSRNGCS-------IPDDILDALTESERKGQTV 705 (951)
T ss_pred eecccCCC---------------cccceEEe--eeE---EeechHHHHHhcCCC-------CchhHHHhhhhHhhcCceE
Confidence 11223332 11111111 000 112222222111111 1233555666666777777
Q ss_pred EEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEec
Q 041225 263 LVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTG 342 (658)
Q Consensus 263 l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TG 342 (658)
.+++ .||++.|.++++|++|+++..+|..|++.|++++|+||
T Consensus 706 v~v~--------------------------------------vn~~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTG 747 (951)
T KOG0207|consen 706 VYVA--------------------------------------VNGQLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTG 747 (951)
T ss_pred EEEE--------------------------------------ECCEEEEEEEeccccchhHHHHHHHHHhcCceEEEEcC
Confidence 7666 68999999999999999999999999999999999999
Q ss_pred CChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCC
Q 041225 343 DKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQ 422 (658)
Q Consensus 343 r~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (658)
|+..+|..+|+++|+
T Consensus 748 Dn~~aA~svA~~VGi----------------------------------------------------------------- 762 (951)
T KOG0207|consen 748 DNDAAARSVAQQVGI----------------------------------------------------------------- 762 (951)
T ss_pred CCHHHHHHHHHhhCc-----------------------------------------------------------------
Confidence 999999999999995
Q ss_pred CCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhcCCCeEEEEcCCcCChh
Q 041225 423 GHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVS 502 (658)
Q Consensus 423 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~~~~~v~aiGDg~NDi~ 502 (658)
..|.+...|.+|...|+.|++. ...|+|+|||.||.|
T Consensus 763 ------------------------------------------~~V~aev~P~~K~~~Ik~lq~~-~~~VaMVGDGINDaP 799 (951)
T KOG0207|consen 763 ------------------------------------------DNVYAEVLPEQKAEKIKEIQKN-GGPVAMVGDGINDAP 799 (951)
T ss_pred ------------------------------------------ceEEeccCchhhHHHHHHHHhc-CCcEEEEeCCCCccH
Confidence 3378899999999999999998 578999999999999
Q ss_pred hhhhcceeEEecCccchhhhhhcccccccccchHHHHhh-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc
Q 041225 503 MIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLV-HGHWNYQRIGYLVLYNFYRNAVFVLMLFWYILFTGFSTTS 581 (658)
Q Consensus 503 Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~-~gr~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~s~~~ 581 (658)
+|..||+||+| +...+.|.++||+|+...+....+..+ .+|....|++..+.|.+.+|++.+.+.....+-.+ .--+
T Consensus 800 ALA~AdVGIai-g~gs~vAieaADIVLmrn~L~~v~~ai~LSrkt~~rIk~N~~~A~~yn~~~IpIAagvF~P~~-~~L~ 877 (951)
T KOG0207|consen 800 ALAQADVGIAI-GAGSDVAIEAADIVLMRNDLRDVPFAIDLSRKTVKRIKLNFVWALIYNLVGIPIAAGVFAPFG-IVLP 877 (951)
T ss_pred HHHhhccceee-ccccHHHHhhCCEEEEccchhhhHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhheecccCCc-cccC
Confidence 99999999999 555777999999999999998888877 69999999999999999999976655332211111 1123
Q ss_pred chhhHHHHHHHHHHhhhhhhhh
Q 041225 582 ALTDWSSVFYSLLYTSVPTIVV 603 (658)
Q Consensus 582 ~~~~~~~~~~n~~~~~~p~~~~ 603 (658)
|+..-..+..+.+...+..+.+
T Consensus 878 Pw~A~lama~SSvsVv~sSllL 899 (951)
T KOG0207|consen 878 PWMASLAMAASSVSVVLSSLLL 899 (951)
T ss_pred chHHHHHHHhhhHHHhhhHHHH
Confidence 3333334444545444555555
|
|
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-34 Score=314.65 Aligned_cols=300 Identities=24% Similarity=0.297 Sum_probs=221.0
Q ss_pred CCCCeeeeccCCcccccccceEEEeccCcccccceEEEEEEEEcCcccCCchhhHHHHHHHHHhhhccccccccChHHHH
Q 041225 22 SSGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCGKNYGNSLLLAQQVSAAAVRRWKLKSEISVDSKLME 101 (658)
Q Consensus 22 ~~~~~i~vr~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (658)
..++||++|+++++|.||++++||||||||||+|+|++.++...+....
T Consensus 227 ~~~~gilvk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~~------------------------------- 275 (556)
T TIGR01525 227 AARRGILIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEPLDDASI------------------------------- 275 (556)
T ss_pred HHHCCceecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEecCCCCc-------------------------------
Confidence 3568899999999999999999999999999999999999875442110
Q ss_pred HHhhccCcchhHHHHHHHHHHhhccceeecCCCCCCCCCCCCcccCCcceeeecCChhHHHHHHHHHHcCcEEEEEcCCe
Q 041225 102 LLSKDLVGDERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYTLFERTSGH 181 (658)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~ 181 (658)
...+++...+. .+..+.||.+.|+++++++.|..... +.
T Consensus 276 ------------~~~~~l~~a~~--------------------------~e~~~~hp~~~Ai~~~~~~~~~~~~~--~~- 314 (556)
T TIGR01525 276 ------------SEEELLALAAA--------------------------LEQSSSHPLARAIVRYAKKRGLELPK--QE- 314 (556)
T ss_pred ------------cHHHHHHHHHH--------------------------HhccCCChHHHHHHHHHHhcCCCccc--cc-
Confidence 00112221111 11234599999999999987654211 00
Q ss_pred EEEEeCCcEEEEEEEEeeCCCCCCCeeEEEEEcCCCcEEEEEeCCchHhHHhhhcCccccHHHHHHHHHHHHHHhhcCCe
Q 041225 182 IVIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADSSMFNILAKDSKRNDLIRHITQSHLSEYSSQGLR 261 (658)
Q Consensus 182 ~~~~~~g~~~~~~il~~~~F~s~rk~msviv~~~~~~~~l~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r 261 (658)
-...+.|.+ ++..++ |. .-+..|+++.+ + ... .........++.++.+|.|
T Consensus 315 ~~~~~~~~g-----------------i~~~~~---g~-~~~~lg~~~~~-~-~~~------~~~~~~~~~~~~~~~~g~~ 365 (556)
T TIGR01525 315 DVEEVPGKG-----------------VEATVD---GQ-EEVRIGNPRLL-E-LAA------EPISASPDLLNEGESQGKT 365 (556)
T ss_pred CeeEecCCe-----------------EEEEEC---Ce-eEEEEecHHHH-h-hcC------CCchhhHHHHHHHhhCCcE
Confidence 001111111 111111 10 12334554433 1 000 0111223456678889999
Q ss_pred EEEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccccCCChHHHHHHHHhcC-CeEEEE
Q 041225 262 TLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAG-IKVWVL 340 (658)
Q Consensus 262 ~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~G-I~v~i~ 340 (658)
++.++ .||+++|.+.++++++|+++++|+.|+++| ++++|+
T Consensus 366 ~~~v~--------------------------------------~~~~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~iv 407 (556)
T TIGR01525 366 VVFVA--------------------------------------VDGELLGVIALRDQLRPEAKEAIAALKRAGGIKLVML 407 (556)
T ss_pred EEEEE--------------------------------------ECCEEEEEEEecccchHhHHHHHHHHHHcCCCeEEEE
Confidence 98887 367999999999999999999999999999 999999
Q ss_pred ecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCC
Q 041225 341 TGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDV 420 (658)
Q Consensus 341 TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (658)
|||+..++..+++++|+..
T Consensus 408 Tgd~~~~a~~i~~~lgi~~------------------------------------------------------------- 426 (556)
T TIGR01525 408 TGDNRSAAEAVAAELGIDE------------------------------------------------------------- 426 (556)
T ss_pred eCCCHHHHHHHHHHhCCCe-------------------------------------------------------------
Confidence 9999999999999999821
Q ss_pred CCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhcCCCeEEEEcCCcCC
Q 041225 421 PQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGAND 500 (658)
Q Consensus 421 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~~~~~v~aiGDg~ND 500 (658)
++.+..|.+|...++.++.. +++++++|||.||
T Consensus 427 ----------------------------------------------~f~~~~p~~K~~~v~~l~~~-~~~v~~vGDg~nD 459 (556)
T TIGR01525 427 ----------------------------------------------VHAELLPEDKLAIVKELQEE-GGVVAMVGDGIND 459 (556)
T ss_pred ----------------------------------------------eeccCCHHHHHHHHHHHHHc-CCEEEEEECChhH
Confidence 23345678999999999986 5799999999999
Q ss_pred hhhhhhcceeEEecCccchhhhhhcccccccccchHHHHhh-hhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 041225 501 VSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLV-HGHWNYQRIGYLVLYNFYRNAVFVLMLF 569 (658)
Q Consensus 501 i~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~-~gr~~~~~~~~~i~~~~~~~~~~~~~~~ 569 (658)
++|++.||+||++ +++.+.++..||+++.+.++.....++ .||..+.++++.+.|.+..|++.+.+.+
T Consensus 460 ~~al~~A~vgia~-g~~~~~~~~~Ad~vi~~~~~~~l~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~~a~ 528 (556)
T TIGR01525 460 APALAAADVGIAM-GAGSDVAIEAADIVLLNDDLSSLPTAIDLSRKTRRIIKQNLAWALGYNLVAIPLAA 528 (556)
T ss_pred HHHHhhCCEeEEe-CCCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999 466667889999999998888777666 8999999999999999999998765544
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-32 Score=300.12 Aligned_cols=287 Identities=26% Similarity=0.333 Sum_probs=214.1
Q ss_pred CCCeeeeccCCcccccccceEEEeccCcccccceEEEEEEEEcCcccCCchhhHHHHHHHHHhhhccccccccChHHHHH
Q 041225 23 SGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCGKNYGNSLLLAQQVSAAAVRRWKLKSEISVDSKLMEL 102 (658)
Q Consensus 23 ~~~~i~vr~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (658)
.++||++|++.++|.||++++||||||||||+|+|++.++...+...
T Consensus 259 a~~gIlik~~~~lE~l~~v~~i~fDKTGTLT~g~~~v~~i~~~~~~~--------------------------------- 305 (562)
T TIGR01511 259 AKNGVLIKDGDALERAANIDTVVFDKTGTLTQGKPTVTDVHVFGDRD--------------------------------- 305 (562)
T ss_pred HHCCeEEcChHHHHHhhCCCEEEECCCCCCcCCCEEEEEEecCCCCC---------------------------------
Confidence 46899999999999999999999999999999999999986433110
Q ss_pred HhhccCcchhHHHHHHHH-HHhhccceeecCCCCCCCCCCCCcccCCcceeeecCChhHHHHHHHHHHcCcEEEEEcCCe
Q 041225 103 LSKDLVGDERIAAHEFFL-TLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYTLFERTSGH 181 (658)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~-~l~lC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~ 181 (658)
..+++. +.++ +..+.||.+.|+++++++.|......++
T Consensus 306 ------------~~~~l~~aa~~---------------------------e~~s~HPia~Ai~~~~~~~~~~~~~~~~-- 344 (562)
T TIGR01511 306 ------------RTELLALAAAL---------------------------EAGSEHPLAKAIVSYAKEKGITLVEVSD-- 344 (562)
T ss_pred ------------HHHHHHHHHHH---------------------------hccCCChHHHHHHHHHHhcCCCcCCCCC--
Confidence 011111 1122 2234599999999999887654321111
Q ss_pred EEEEeCCcEEEEEEEEeeCCCCCCCeeEEEEEcCCCcEEEEEeCCchHhHHhhhcCccccHHHHHHHHHHHHHHhhcCCe
Q 041225 182 IVIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADSSMFNILAKDSKRNDLIRHITQSHLSEYSSQGLR 261 (658)
Q Consensus 182 ~~~~~~g~~~~~~il~~~~F~s~rk~msviv~~~~~~~~l~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r 261 (658)
+..+.|.+....+ ++ .-+..|+++.+.+.-.. +..+..+|.+
T Consensus 345 -~~~~~g~Gi~~~~--------------------~g--~~~~iG~~~~~~~~~~~---------------~~~~~~~g~~ 386 (562)
T TIGR01511 345 -FKAIPGIGVEGTV--------------------EG--TKIQLGNEKLLGENAIK---------------IDGKAEQGST 386 (562)
T ss_pred -eEEECCceEEEEE--------------------CC--EEEEEECHHHHHhCCCC---------------CChhhhCCCE
Confidence 2233444433221 11 22445776654321100 0012345666
Q ss_pred EEEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEe
Q 041225 262 TLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLT 341 (658)
Q Consensus 262 ~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~T 341 (658)
++.+ +.|++++|.++++++++|+++++|++|+++|++++|+|
T Consensus 387 ~~~~--------------------------------------~~~~~~~g~~~~~d~l~~~a~e~i~~Lk~~Gi~v~ilS 428 (562)
T TIGR01511 387 SVLV--------------------------------------AVNGELAGVFALEDQLRPEAKEVIQALKRRGIEPVMLT 428 (562)
T ss_pred EEEE--------------------------------------EECCEEEEEEEecccccHHHHHHHHHHHHcCCeEEEEc
Confidence 6544 46899999999999999999999999999999999999
Q ss_pred cCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCC
Q 041225 342 GDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVP 421 (658)
Q Consensus 342 Gr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (658)
||+...+..+++.+|+.
T Consensus 429 gd~~~~a~~ia~~lgi~--------------------------------------------------------------- 445 (562)
T TIGR01511 429 GDNRKTAKAVAKELGIN--------------------------------------------------------------- 445 (562)
T ss_pred CCCHHHHHHHHHHcCCc---------------------------------------------------------------
Confidence 99999999999999871
Q ss_pred CCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhcCCCeEEEEcCCcCCh
Q 041225 422 QGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDV 501 (658)
Q Consensus 422 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~~~~~v~aiGDg~NDi 501 (658)
++....|.+|...++.+++. +++|+++|||.||+
T Consensus 446 ---------------------------------------------~~~~~~p~~K~~~v~~l~~~-~~~v~~VGDg~nD~ 479 (562)
T TIGR01511 446 ---------------------------------------------VRAEVLPDDKAALIKELQEK-GRVVAMVGDGINDA 479 (562)
T ss_pred ---------------------------------------------EEccCChHHHHHHHHHHHHc-CCEEEEEeCCCccH
Confidence 12233567899999999886 68999999999999
Q ss_pred hhhhhcceeEEecCccchhhhhhcccccccccchHHHHhh-hhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 041225 502 SMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLV-HGHWNYQRIGYLVLYNFYRNAVFVLMLF 569 (658)
Q Consensus 502 ~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~-~gr~~~~~~~~~i~~~~~~~~~~~~~~~ 569 (658)
+|++.||+||+| +.+.+.++..||+++.+.+......++ .||..++++++.+.|.+..|++.+.+.+
T Consensus 480 ~al~~A~vgia~-g~g~~~a~~~Advvl~~~~l~~l~~~i~lsr~~~~~i~qn~~~a~~~n~~~i~la~ 547 (562)
T TIGR01511 480 PALAQADVGIAI-GAGTDVAIEAADVVLMRNDLNDVATAIDLSRKTLRRIKQNLLWAFGYNVIAIPIAA 547 (562)
T ss_pred HHHhhCCEEEEe-CCcCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999 456666899999999877776666556 8999999999999999999997665544
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-32 Score=311.32 Aligned_cols=294 Identities=20% Similarity=0.245 Sum_probs=224.1
Q ss_pred CCCCeeeeccCCcccccccceEEEeccCcccccceEEEEEEEEcCcccCCchhhHHHHHHHHHhhhccccccccChHHHH
Q 041225 22 SSGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCGKNYGNSLLLAQQVSAAAVRRWKLKSEISVDSKLME 101 (658)
Q Consensus 22 ~~~~~i~vr~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (658)
..++||+||+++++|+||+++++|||||||||+|+|+|.++...+.. . +
T Consensus 498 ~a~~gilvk~~~~le~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~~-~--------------------------~---- 546 (834)
T PRK10671 498 AAEFGVLVRDADALQRASTLDTLVFDKTGTLTEGKPQVVAVKTFNGV-D--------------------------E---- 546 (834)
T ss_pred HHHCCeEEecHHHHHhhcCCCEEEEcCCCccccCceEEEEEEccCCC-C--------------------------H----
Confidence 34789999999999999999999999999999999999987643311 0 0
Q ss_pred HHhhccCcchhHHHHHHHHHHhhccceeecCCCCCCCCCCCCcccCCcceeeecCChhHHHHHHHHHHcCcEEEEEcCCe
Q 041225 102 LLSKDLVGDERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYTLFERTSGH 181 (658)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~ 181 (658)
.+.+-.+.+++. .+.||.+.|+++++...... ..+
T Consensus 547 -------------~~~l~~a~~~e~---------------------------~s~hp~a~Ai~~~~~~~~~~--~~~--- 581 (834)
T PRK10671 547 -------------AQALRLAAALEQ---------------------------GSSHPLARAILDKAGDMTLP--QVN--- 581 (834)
T ss_pred -------------HHHHHHHHHHhC---------------------------CCCCHHHHHHHHHHhhCCCC--Ccc---
Confidence 011112233322 24599999999988643211 000
Q ss_pred EEEEeCCcEEEEEEEEeeCCCCCCCeeEEEEEcCCCcEEEEEeCCchHhHHhhhcCccccHHHHHHHHHHHHHHhhcCCe
Q 041225 182 IVIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADSSMFNILAKDSKRNDLIRHITQSHLSEYSSQGLR 261 (658)
Q Consensus 182 ~~~~~~g~~~~~~il~~~~F~s~rk~msviv~~~~~~~~l~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r 261 (658)
-+..+.|.+.+.. .+|. .+..|+++.+.+... ..+.+...++.+..+|.+
T Consensus 582 ~~~~~~g~Gv~~~--------------------~~g~--~~~~G~~~~~~~~~~--------~~~~~~~~~~~~~~~g~~ 631 (834)
T PRK10671 582 GFRTLRGLGVSGE--------------------AEGH--ALLLGNQALLNEQQV--------DTKALEAEITAQASQGAT 631 (834)
T ss_pred cceEecceEEEEE--------------------ECCE--EEEEeCHHHHHHcCC--------ChHHHHHHHHHHHhCCCe
Confidence 0112233332211 1222 345688886643211 123345566778889999
Q ss_pred EEEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEe
Q 041225 262 TLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLT 341 (658)
Q Consensus 262 ~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~T 341 (658)
++.+++ |++++|.+++.|+++|++.++|++|+++|++++|+|
T Consensus 632 ~v~va~--------------------------------------~~~~~g~~~l~d~~r~~a~~~i~~L~~~gi~v~~~T 673 (834)
T PRK10671 632 PVLLAV--------------------------------------DGKAAALLAIRDPLRSDSVAALQRLHKAGYRLVMLT 673 (834)
T ss_pred EEEEEE--------------------------------------CCEEEEEEEccCcchhhHHHHHHHHHHCCCeEEEEc
Confidence 988874 578999999999999999999999999999999999
Q ss_pred cCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCC
Q 041225 342 GDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVP 421 (658)
Q Consensus 342 Gr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (658)
||+..++..+++.+|+..
T Consensus 674 gd~~~~a~~ia~~lgi~~-------------------------------------------------------------- 691 (834)
T PRK10671 674 GDNPTTANAIAKEAGIDE-------------------------------------------------------------- 691 (834)
T ss_pred CCCHHHHHHHHHHcCCCE--------------------------------------------------------------
Confidence 999999999999999721
Q ss_pred CCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhcCCCeEEEEcCCcCCh
Q 041225 422 QGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDV 501 (658)
Q Consensus 422 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~~~~~v~aiGDg~NDi 501 (658)
++....|.+|..+++.++.. +++|+++|||.||+
T Consensus 692 ---------------------------------------------~~~~~~p~~K~~~i~~l~~~-~~~v~~vGDg~nD~ 725 (834)
T PRK10671 692 ---------------------------------------------VIAGVLPDGKAEAIKRLQSQ-GRQVAMVGDGINDA 725 (834)
T ss_pred ---------------------------------------------EEeCCCHHHHHHHHHHHhhc-CCEEEEEeCCHHHH
Confidence 23445688999999999987 67999999999999
Q ss_pred hhhhhcceeEEecCccchhhhhhcccccccccchHHHHhh-hhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 041225 502 SMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLV-HGHWNYQRIGYLVLYNFYRNAVFVLML 568 (658)
Q Consensus 502 ~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~-~gr~~~~~~~~~i~~~~~~~~~~~~~~ 568 (658)
+|++.||+||+| |++.+.++++||+++.+.++.....++ .||..+.++++.+.|.+.+|++.+.+.
T Consensus 726 ~al~~Agvgia~-g~g~~~a~~~ad~vl~~~~~~~i~~~i~l~r~~~~~i~~Nl~~a~~yn~~~i~~a 792 (834)
T PRK10671 726 PALAQADVGIAM-GGGSDVAIETAAITLMRHSLMGVADALAISRATLRNMKQNLLGAFIYNSLGIPIA 792 (834)
T ss_pred HHHHhCCeeEEe-cCCCHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999 677778999999999998888777666 799999999999999999998776544
|
|
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.1e-30 Score=285.93 Aligned_cols=280 Identities=23% Similarity=0.273 Sum_probs=207.7
Q ss_pred CCCCeeeeccCCcccccccceEEEeccCcccccceEEEEEEEEcCcccCCchhhHHHHHHHHHhhhccccccccChHHHH
Q 041225 22 SSGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCGKNYGNSLLLAQQVSAAAVRRWKLKSEISVDSKLME 101 (658)
Q Consensus 22 ~~~~~i~vr~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (658)
..++||++|+++++|+||+++++|||||||||+|+|++.++...
T Consensus 227 ~~k~gilik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~------------------------------------ 270 (536)
T TIGR01512 227 AARHGILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVPA------------------------------------ 270 (536)
T ss_pred HHHCCeEEcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeHH------------------------------------
Confidence 45789999999999999999999999999999999999987420
Q ss_pred HHhhccCcchhHHHHHHHHHHhhccceeecCCCCCCCCCCCCcccCCcceeeecCChhHHHHHHHHHHcCcEEEEEcCCe
Q 041225 102 LLSKDLVGDERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYTLFERTSGH 181 (658)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~ 181 (658)
+++...+. .+..+.||.+.|+++++.+.+ .+ .
T Consensus 271 ---------------~~l~~a~~--------------------------~e~~~~hp~~~Ai~~~~~~~~-~~------~ 302 (536)
T TIGR01512 271 ---------------EVLRLAAA--------------------------AEQASSHPLARAIVDYARKRE-NV------E 302 (536)
T ss_pred ---------------HHHHHHHH--------------------------HhccCCCcHHHHHHHHHHhcC-CC------c
Confidence 11111111 112345999999999998764 10 0
Q ss_pred EEEEeCCcEEEEEEEEeeCCCCCCCeeEEEEEcCCCcEEEEEeCCchHhHHhhhcCccccHHHHHHHHHHHHHHhhcCCe
Q 041225 182 IVIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADSSMFNILAKDSKRNDLIRHITQSHLSEYSSQGLR 261 (658)
Q Consensus 182 ~~~~~~g~~~~~~il~~~~F~s~rk~msviv~~~~~~~~l~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r 261 (658)
-....+|.+.+.. + +|.. +.-|+++.+.+.. ...+..+|.+
T Consensus 303 ~~~~~~g~gi~~~-----------------~---~g~~--~~ig~~~~~~~~~-----------------~~~~~~~~~~ 343 (536)
T TIGR01512 303 SVEEVPGEGVRAV-----------------V---DGGE--VRIGNPRSLEAAV-----------------GARPESAGKT 343 (536)
T ss_pred ceEEecCCeEEEE-----------------E---CCeE--EEEcCHHHHhhcC-----------------CcchhhCCCe
Confidence 1122233322211 1 1221 2246654331110 0033445655
Q ss_pred EEEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccccCCChHHHHHHHHhcCC-eEEEE
Q 041225 262 TLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGI-KVWVL 340 (658)
Q Consensus 262 ~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI-~v~i~ 340 (658)
++.++ .|++++|.+.++++++|++.++|++|+++|+ +++|+
T Consensus 344 ~~~v~--------------------------------------~~~~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vv 385 (536)
T TIGR01512 344 IVHVA--------------------------------------RDGTYLGYILLSDEPRPDAAEAIAELKALGIEKVVML 385 (536)
T ss_pred EEEEE--------------------------------------ECCEEEEEEEEeccchHHHHHHHHHHHHcCCCcEEEE
Confidence 54443 4789999999999999999999999999999 99999
Q ss_pred ecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCC
Q 041225 341 TGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDV 420 (658)
Q Consensus 341 TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (658)
|||+..++..+++++|+..
T Consensus 386 Tgd~~~~a~~i~~~lgi~~------------------------------------------------------------- 404 (536)
T TIGR01512 386 TGDRRAVAERVARELGIDE------------------------------------------------------------- 404 (536)
T ss_pred cCCCHHHHHHHHHHcCChh-------------------------------------------------------------
Confidence 9999999999999999821
Q ss_pred CCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhcCCCeEEEEcCCcCC
Q 041225 421 PQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGAND 500 (658)
Q Consensus 421 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~~~~~v~aiGDg~ND 500 (658)
++....|.+|...++.++.. +++|+++|||.||
T Consensus 405 ----------------------------------------------~f~~~~p~~K~~~i~~l~~~-~~~v~~vGDg~nD 437 (536)
T TIGR01512 405 ----------------------------------------------VHAELLPEDKLEIVKELREK-YGPVAMVGDGIND 437 (536)
T ss_pred ----------------------------------------------hhhccCcHHHHHHHHHHHhc-CCEEEEEeCCHHH
Confidence 12344578999999999887 5899999999999
Q ss_pred hhhhhhcceeEEecCccchhhhhhcccccccccchHHHHhh-hhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 041225 501 VSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLV-HGHWNYQRIGYLVLYNFYRNAVFVLMLFW 570 (658)
Q Consensus 501 i~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~-~gr~~~~~~~~~i~~~~~~~~~~~~~~~~ 570 (658)
++|++.||+||++..++.+.++.+||+++.+.++.....++ .||..+.++++.+.|.+..|++.+.+.++
T Consensus 438 ~~al~~A~vgia~g~~~~~~~~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~nl~~a~~~n~~~i~~a~~ 508 (536)
T TIGR01512 438 APALAAADVGIAMGASGSDVAIETADVVLLNDDLSRLPQAIRLARRTRRIVKQNVVIALGIILLLILLALF 508 (536)
T ss_pred HHHHHhCCEEEEeCCCccHHHHHhCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999994255667899999999776666665544 89999999999999999999877655543
|
. |
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-28 Score=246.81 Aligned_cols=369 Identities=20% Similarity=0.243 Sum_probs=264.4
Q ss_pred CCCCCeeeeccCCcccccccceEEEeccCcccccceEEEEEEEEcCcccCCchhhHHHHHHHHHhhhccccccccChHHH
Q 041225 21 SSSGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCGKNYGNSLLLAQQVSAAAVRRWKLKSEISVDSKLM 100 (658)
Q Consensus 21 ~~~~~~i~vr~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (658)
...+-|++.++..++|..|.||++..|||||+|-|+-.-...+..+..
T Consensus 279 Rv~~~NViA~SGRAVEaaGDvdtliLDKTGTIT~GnR~A~~f~p~~gv-------------------------------- 326 (681)
T COG2216 279 RVTQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFIPVPGV-------------------------------- 326 (681)
T ss_pred HhhhhceeecCcchhhhcCCccEEEecccCceeecchhhhheecCCCC--------------------------------
Confidence 344568999999999999999999999999999876554444433221
Q ss_pred HHHhhccCcchhHHHHHHHHHHhhccceeecCCCCCCCCCCCCcccCCcceeeecCChhHHHHHHHHHHcCcEEEEEcCC
Q 041225 101 ELLSKDLVGDERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYTLFERTSG 180 (658)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~ 180 (658)
..+++..+..+++ +....|..+.++++|++.|+.+.....
T Consensus 327 -------------~~~~la~aa~lsS--------------------------l~DeTpEGrSIV~LA~~~~~~~~~~~~- 366 (681)
T COG2216 327 -------------SEEELADAAQLAS--------------------------LADETPEGRSIVELAKKLGIELREDDL- 366 (681)
T ss_pred -------------CHHHHHHHHHHhh--------------------------hccCCCCcccHHHHHHHhccCCCcccc-
Confidence 1233444444432 112378889999999999855432211
Q ss_pred eEEEEeCCcEEEEEEEEeeCCCCCCCeeEEEEEcCCCcEEEEEeCCchHhHHhhhcCccccHHHHHHHHHHHHHHhhcCC
Q 041225 181 HIVIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADSSMFNILAKDSKRNDLIRHITQSHLSEYSSQGL 260 (658)
Q Consensus 181 ~~~~~~~g~~~~~~il~~~~F~s~rk~msviv~~~~~~~~l~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 260 (658)
.. --...||+.+.|..++-.. ++ +-+-|||.+.+........ ...++.++..+++-++.|=
T Consensus 367 ---------~~---~~~fvpFtA~TRmSGvd~~--~~--~~irKGA~dai~~~v~~~~---g~~p~~l~~~~~~vs~~GG 427 (681)
T COG2216 367 ---------QS---HAEFVPFTAQTRMSGVDLP--GG--REIRKGAVDAIRRYVRERG---GHIPEDLDAAVDEVSRLGG 427 (681)
T ss_pred ---------cc---cceeeecceecccccccCC--CC--ceeecccHHHHHHHHHhcC---CCCCHHHHHHHHHHHhcCC
Confidence 00 1235689888765555433 22 5678999999999887432 2356677888888999999
Q ss_pred eEEEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEE
Q 041225 261 RTLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVL 340 (658)
Q Consensus 261 r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~ 340 (658)
..|+++ .|+.++|.+.++|-++|+.+|-+.+||+.||+.+||
T Consensus 428 TPL~V~--------------------------------------~~~~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~ 469 (681)
T COG2216 428 TPLVVV--------------------------------------ENGRILGVIYLKDIVKPGIKERFAELRKMGIKTVMI 469 (681)
T ss_pred CceEEE--------------------------------------ECCEEEEEEEehhhcchhHHHHHHHHHhcCCeEEEE
Confidence 998887 478999999999999999999999999999999999
Q ss_pred ecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCC
Q 041225 341 TGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDV 420 (658)
Q Consensus 341 TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (658)
|||++-||..||.+.|+..
T Consensus 470 TGDN~~TAa~IA~EAGVDd------------------------------------------------------------- 488 (681)
T COG2216 470 TGDNPLTAAAIAAEAGVDD------------------------------------------------------------- 488 (681)
T ss_pred eCCCHHHHHHHHHHhCchh-------------------------------------------------------------
Confidence 9999999999999999732
Q ss_pred CCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhcCCCeEEEEcCCcCC
Q 041225 421 PQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGAND 500 (658)
Q Consensus 421 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~~~~~v~aiGDg~ND 500 (658)
.-+.++|++|...|+.-+.. +.-|+|+|||.||
T Consensus 489 ----------------------------------------------fiAeatPEdK~~~I~~eQ~~-grlVAMtGDGTND 521 (681)
T COG2216 489 ----------------------------------------------FIAEATPEDKLALIRQEQAE-GRLVAMTGDGTND 521 (681)
T ss_pred ----------------------------------------------hhhcCChHHHHHHHHHHHhc-CcEEEEcCCCCCc
Confidence 13567899999999999987 6899999999999
Q ss_pred hhhhhhcceeEEecCccchhhhhhcccccccccchHHHHhh-hhhhHHHHHHHHHHHHHHHHH---HHHHHHHHHHHhhc
Q 041225 501 VSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLV-HGHWNYQRIGYLVLYNFYRNA---VFVLMLFWYILFTG 576 (658)
Q Consensus 501 i~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~-~gr~~~~~~~~~i~~~~~~~~---~~~~~~~~~~~~~~ 576 (658)
.|+|..||+|+|| ++..+.+|++++.|-.|-+..+.+..+ -|+...-.-..+..|++..-+ ..++|..|+.++..
T Consensus 522 APALAqAdVg~AM-NsGTqAAkEAaNMVDLDS~PTKlievV~IGKqlLiTRGaLTTFSIANDvAKYFaIiPA~F~~~~P~ 600 (681)
T COG2216 522 APALAQADVGVAM-NSGTQAAKEAANMVDLDSNPTKLIEVVEIGKQLLITRGALTTFSIANDVAKYFAIIPAMFAAAYPQ 600 (681)
T ss_pred chhhhhcchhhhh-ccccHHHHHhhcccccCCCccceehHhhhhhhheeecccceeeehhhHHHHHHHHHHHHHHhhccc
Confidence 9999999999999 777778999999998888887777666 476554433333334433322 23345555544411
Q ss_pred ------cccccchhhHH-HHHHHHH--HhhhhhhhheecccCCChHHHhhCCc-ccccccc
Q 041225 577 ------FSTTSALTDWS-SVFYSLL--YTSVPTIVVGIVDKDLSHKTLMQYPK-LYVVQQY 627 (658)
Q Consensus 577 ------~s~~~~~~~~~-~~~~n~~--~~~~p~~~~~~~~~~~~~~~~~~~p~-~y~~~~~ 627 (658)
..-.+|.+... -+.||.+ ..++|.-.-|+-.++.+...+++..- .|-.|..
T Consensus 601 l~~lNiM~L~sP~SAilSAlIfNAlIIv~LIPLAlkGVkyk~~~a~~lL~rNl~iYGlGGl 661 (681)
T COG2216 601 LGALNIMHLHSPQSAILSALIFNALIIVALIPLALKGVKYKPLSASALLRRNLLIYGLGGL 661 (681)
T ss_pred ccceeecccCCcHHHHHHHHHHHHHHHHHhHHHHhcCcccccCCHHHHHhhCeEEEecCce
Confidence 11122333332 2345543 34566667778889998887776544 4777654
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.8e-24 Score=218.16 Aligned_cols=229 Identities=17% Similarity=0.144 Sum_probs=146.0
Q ss_pred HHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccC-------CCcc--------
Q 041225 299 TAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLT-------PDMQ-------- 363 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~-------~~~~-------- 363 (658)
+++++|+|||||+. +..+++.++++|++++++|++|+++|||++..+..+.+.+++.. .++.
T Consensus 4 kli~~DlDGTLl~~---~~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~I~~NGa~i~~~~~~ 80 (270)
T PRK10513 4 KLIAIDMDGTLLLP---DHTISPAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKELHMEQPGDYCITNNGALVQKAADG 80 (270)
T ss_pred EEEEEecCCcCcCC---CCccCHHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHHhCCCCCCCeEEEcCCeEEEECCCC
Confidence 45789999999987 55899999999999999999999999999999999999988632 2222
Q ss_pred -EEEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccc-h-hHHHHHHhhcCCCCCC-CCCCCchhhhhccCcEEEEE
Q 041225 364 -QIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKR-S-AEIEYLAISNDAKFSD-VPQGHDVKEVAAIASLALII 439 (658)
Q Consensus 364 -~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~ 439 (658)
++.....+.+.+.++++..++. ............+... . .......... ..... ..............++. +.
T Consensus 81 ~~i~~~~l~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~k~~-~~ 157 (270)
T PRK10513 81 ETVAQTALSYDDYLYLEKLSREV-GVHFHALDRNTLYTANRDISYYTVHESFL-TGIPLVFREVEKMDPNLQFPKVM-MI 157 (270)
T ss_pred CEEEecCCCHHHHHHHHHHHHHc-CCcEEEEECCEEEEecCCcchhHHHhhhh-ccCCccccchhhccccCCceEEE-Ee
Confidence 2333344778888888776653 1111111111111110 0 0010000000 00000 00000000011122222 33
Q ss_pred eCccHHHHHHHhhHHhh---hhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEe
Q 041225 440 DGNSLVYILEKDLESDL---FDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGI 513 (658)
Q Consensus 440 ~~~~~~~~~~~~~~~~~---~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam 513 (658)
...+....+...+...+ ..+..+.+.++++.+.+++|+.+++.|+++ +.++|+|||||.||++||+.||+||||
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm 237 (270)
T PRK10513 158 DEPEILDAAIARIPAEVKERYTVLKSAPYFLEILDKRVNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAM 237 (270)
T ss_pred CCHHHHHHHHHHhHHHhcCcEEEEEecCeeEEEeCCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEe
Confidence 33322222222333221 234556677899999999999999999988 668899999999999999999999999
Q ss_pred cCccchhhhhhcccccccccc
Q 041225 514 CGQEGRQAVMASDFAMGQFRF 534 (658)
Q Consensus 514 ~~~~~~~~k~~AD~vl~~~~~ 534 (658)
+|+.+.+|++||+|+.+.+.
T Consensus 238 -~NA~~~vK~~A~~vt~~n~~ 257 (270)
T PRK10513 238 -GNAIPSVKEVAQFVTKSNLE 257 (270)
T ss_pred -cCccHHHHHhcCeeccCCCc
Confidence 77888899999999876544
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.3e-24 Score=214.21 Aligned_cols=230 Identities=16% Similarity=0.149 Sum_probs=146.7
Q ss_pred HHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCC----Cc--------cEEE
Q 041225 299 TAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTP----DM--------QQII 366 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~----~~--------~~i~ 366 (658)
+++++|+|||||+. +..+++.+.++|++++++|++|+++|||++..+..+.+.+++..+ +| ++++
T Consensus 3 kli~~DlDGTLl~~---~~~is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~ 79 (266)
T PRK10976 3 QVVASDLDGTLLSP---DHTLSPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDNLEIKSYMITSNGARVHDTDGNLIF 79 (266)
T ss_pred eEEEEeCCCCCcCC---CCcCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCCeEEEcCCcEEECCCCCEeh
Confidence 35679999999987 457999999999999999999999999999999999988886322 22 2333
Q ss_pred EcCCCHHHHHHHHHHHHHhcCcccCccccccccccc-hhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHH
Q 041225 367 INGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKR-SAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLV 445 (658)
Q Consensus 367 ~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 445 (658)
...++.+.+.++++..++..............+... ..............+.. ...... ......++.+.....+..
T Consensus 80 ~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~i~ki~~~~~~~~~~ 157 (266)
T PRK10976 80 SHNLDRDIASDLFGVVHDNPDIITNVYRDDEWFMNRHRPEEMRFFKEAVFKYQL-YEPGLL-EPDGVSKVFFTCDSHEKL 157 (266)
T ss_pred hhcCCHHHHHHHHHhhcccCCEEEEEEcCCeEEEcCCChHHHHHHHhcCCccee-echhhc-ccCCceEEEEEcCCHHHH
Confidence 344578888888887754322111111111111111 11111111111111100 000000 111233333333222222
Q ss_pred HHHHHhhHHhh---hhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccch
Q 041225 446 YILEKDLESDL---FDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGR 519 (658)
Q Consensus 446 ~~~~~~~~~~~---~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~ 519 (658)
..+.+.+...+ ..+..+.+.++++.+.+++|+.+++.|+++ +.++|+|||||.||++||+.||+|||| +|+.+
T Consensus 158 ~~~~~~l~~~~~~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm-~NA~~ 236 (266)
T PRK10976 158 LPLEQAINARWGDRVNVSFSTLTCLEVMAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIM-GNAHQ 236 (266)
T ss_pred HHHHHHHHHHhCCcEEEEEeCCceEEEEcCCCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeee-cCCcH
Confidence 22333333322 234455667899999999999999999988 668899999999999999999999999 78888
Q ss_pred hhhhhcc--cccccccc
Q 041225 520 QAVMASD--FAMGQFRF 534 (658)
Q Consensus 520 ~~k~~AD--~vl~~~~~ 534 (658)
.+|++|| +|+.+.+-
T Consensus 237 ~vK~~A~~~~v~~~n~e 253 (266)
T PRK10976 237 RLKDLLPELEVIGSNAD 253 (266)
T ss_pred HHHHhCCCCeecccCch
Confidence 8999988 66665443
|
|
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=5.2e-23 Score=207.52 Aligned_cols=227 Identities=14% Similarity=0.095 Sum_probs=146.5
Q ss_pred HHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCC----C--------ccEEE
Q 041225 299 TAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTP----D--------MQQII 366 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~----~--------~~~i~ 366 (658)
+++++|+|||||+. +..++++++++|++|+++|++|+++|||++..+..+.+++++..+ + +++++
T Consensus 3 kli~~DlDGTLl~~---~~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~l~ 79 (272)
T PRK15126 3 RLAAFDMDGTLLMP---DHHLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGELLH 79 (272)
T ss_pred cEEEEeCCCcCcCC---CCcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCCEEE
Confidence 35689999999986 558999999999999999999999999999999999998886322 2 23344
Q ss_pred EcCCCHHHHHHHHHHHHHhcCcccCcccccccccc-chhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHH
Q 041225 367 INGNSEEECKDLLADAKARYGVKSSNRTKCNSKLK-RSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLV 445 (658)
Q Consensus 367 ~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 445 (658)
...++.+.+.++++..... ............+.. ...............+. ....... ......++. +...+...
T Consensus 80 ~~~i~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~ki~-~~~~~~~~ 155 (272)
T PRK15126 80 RQDLPADVAELVLHQQWDT-RASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQ-LIDLKRL-PAHGVTKIC-FCGDHDDL 155 (272)
T ss_pred eecCCHHHHHHHHHHhhhc-CcEEEEEcCCeEEecCCcHHHHHHHHhcCCceE-EecHHHc-cccCceEEE-EECCHHHH
Confidence 4556888999998877653 111111110111111 11111111111111110 0000000 001223333 33333332
Q ss_pred HHHHHhhHHhh---hhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccch
Q 041225 446 YILEKDLESDL---FDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGR 519 (658)
Q Consensus 446 ~~~~~~~~~~~---~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~ 519 (658)
..+...+...+ ..+..+...++++.+.+++|+.+|+.|+++ +.++|+|||||.||++||+.|++|||| +|+.+
T Consensus 156 ~~~~~~l~~~~~~~~~~~~s~~~~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm-~Na~~ 234 (272)
T PRK15126 156 TRLQIQLNEALGERAHLCFSATDCLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIM-GNAMP 234 (272)
T ss_pred HHHHHHHHHHhcCCEEEEEcCCcEEEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceec-cCChH
Confidence 33333343322 234455567899999999999999999988 567899999999999999999999999 77888
Q ss_pred hhhhhccc--cccccc
Q 041225 520 QAVMASDF--AMGQFR 533 (658)
Q Consensus 520 ~~k~~AD~--vl~~~~ 533 (658)
++|++||+ ++.+.+
T Consensus 235 ~vK~~A~~~~v~~~n~ 250 (272)
T PRK15126 235 QLRAELPHLPVIGHCR 250 (272)
T ss_pred HHHHhCCCCeecCCCc
Confidence 89999997 555543
|
|
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.1e-23 Score=223.01 Aligned_cols=235 Identities=16% Similarity=0.182 Sum_probs=151.0
Q ss_pred HHHHHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCC---------------
Q 041225 296 LRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTP--------------- 360 (658)
Q Consensus 296 ~~~~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~--------------- 360 (658)
...+++++|+|||||+. +..+++.++++|++++++|++|++||||++..+..+.+.+++...
T Consensus 306 ~~iKLIa~DLDGTLLn~---d~~Is~~t~eAI~kl~ekGi~~vIATGR~~~~i~~~l~~L~l~~~~~~I~~~~p~I~~NG 382 (580)
T PLN02887 306 PKFSYIFCDMDGTLLNS---KSQISETNAKALKEALSRGVKVVIATGKARPAVIDILKMVDLAGKDGIISESSPGVFLQG 382 (580)
T ss_pred cCccEEEEeCCCCCCCC---CCccCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCcccccceEeecccEEeecC
Confidence 34567899999999986 558999999999999999999999999999999999888765311
Q ss_pred ------CccEEEEcCCCHHHHHHHHHHHHHhcCcccCcccccccccc-chhHHHHHHhhc-CCCCCCCCCCCchhhhhcc
Q 041225 361 ------DMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLK-RSAEIEYLAISN-DAKFSDVPQGHDVKEVAAI 432 (658)
Q Consensus 361 ------~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 432 (658)
++++++...++.+.+.++++...+. .+..........+.. ............ ...................
T Consensus 383 A~I~d~~g~~I~~~~L~~e~v~eIi~~~~~~-~i~~~~~~~d~~y~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~i 461 (580)
T PLN02887 383 LLVYGRQGREIYRSNLDQEVCREACLYSLEH-KIPLIAFSQDRCLTLFDHPLVDSLHTIYHEPKAEIMSSVDQLLAAADI 461 (580)
T ss_pred eEEEECCCcEEEEEeCCHHHHHHHHHHHHHc-CCeEEEEECCeEEEecCchHHHHHHHhhccccccccCCHHHhhcccCe
Confidence 2334444556889999999877653 111111111111111 111111111100 0000000000111011122
Q ss_pred CcEEEEEeCccHHHHHHHhhHHh---hhhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhh
Q 041225 433 ASLALIIDGNSLVYILEKDLESD---LFDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQM 506 (658)
Q Consensus 433 ~~~~l~~~~~~~~~~~~~~~~~~---~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~ 506 (658)
.++.+....+.....+.+.+... ...++.+.+.++++.+.+++|+.+|+.|+++ +.++|+|||||.||++||+.
T Consensus 462 ~Ki~~~~~~e~~~~~l~~~l~~~~~~~~~v~~S~~~~lEI~p~gvSKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~ 541 (580)
T PLN02887 462 QKVIFLDTAEGVSSVLRPYWSEATGDRANVVQAQPDMLEIVPPGTSKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQL 541 (580)
T ss_pred eEEEEEcChHHHHHHHHHHHHHHhcCcEEEEEecCcEEEEecCCCCHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHH
Confidence 23332222222222233333322 2345566677899999999999999999998 56789999999999999999
Q ss_pred cceeEEecCccchhhhhhcccccccccch
Q 041225 507 ADVGVGICGQEGRQAVMASDFAMGQFRFL 535 (658)
Q Consensus 507 A~vgIam~~~~~~~~k~~AD~vl~~~~~l 535 (658)
||+|||| +|+.+.+|++||+|+.+.+--
T Consensus 542 AG~gVAM-gNA~eeVK~~Ad~VT~sNdED 569 (580)
T PLN02887 542 ASLGVAL-SNGAEKTKAVADVIGVSNDED 569 (580)
T ss_pred CCCEEEe-CCCCHHHHHhCCEEeCCCCcC
Confidence 9999999 788888999999998765443
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.7e-23 Score=206.36 Aligned_cols=233 Identities=18% Similarity=0.189 Sum_probs=148.6
Q ss_pred HHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCC-----------CccEEEE
Q 041225 299 TAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTP-----------DMQQIII 367 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~-----------~~~~i~~ 367 (658)
.++++|+||||++. ...+++.++++|++++++|++++++|||++..+..+.+++++..+ .++.++.
T Consensus 4 kli~~DlDGTLl~~---~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~ 80 (264)
T COG0561 4 KLLAFDLDGTLLDS---NKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQ 80 (264)
T ss_pred eEEEEcCCCCccCC---CCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEee
Confidence 45689999999998 557999999999999999999999999999999999999998532 2344445
Q ss_pred cCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHH
Q 041225 368 NGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYI 447 (658)
Q Consensus 368 ~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 447 (658)
...+.+.+.++++..+......................... ..................... ..+............
T Consensus 81 ~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 157 (264)
T COG0561 81 KPLSREDVEELLELLEDFQGIALVLYTDDGIYLTKKRGTFA--EARIGFANLSPVGREAAELED-NKIIALDKDHEILEE 157 (264)
T ss_pred ecCCHHHHHHHHHHHHhccCceEEEEeccceeeccCCCccc--ccccccccccccccchhhcCc-ceEEEEecChHhHHH
Confidence 55588899999988865422222111111111111110000 000000000000000011111 122222222222222
Q ss_pred HHHhhHHh----hhhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccchh
Q 041225 448 LEKDLESD----LFDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQ 520 (658)
Q Consensus 448 ~~~~~~~~----~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~ 520 (658)
....+... ...+..+.+..+++.+.+++|+.+++.|+++ +.++|+|||||.||++||+.|++|||| +|+.+.
T Consensus 158 ~~~~l~~~~~~~~~~~~~s~~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam-~Na~~~ 236 (264)
T COG0561 158 LVEALRKRFPDLGLTVSSSGPISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAM-GNADEE 236 (264)
T ss_pred HHHHHhhhccccceEEEEcCCceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeec-cCCCHH
Confidence 22233322 2334444455599999999999999999997 556899999999999999999999999 677888
Q ss_pred hhhhcccccccccchHHH
Q 041225 521 AVMASDFAMGQFRFLKRL 538 (658)
Q Consensus 521 ~k~~AD~vl~~~~~l~~l 538 (658)
+|+.||++..+.+--...
T Consensus 237 ~k~~A~~vt~~n~~~Gv~ 254 (264)
T COG0561 237 LKELADYVTTSNDEDGVA 254 (264)
T ss_pred HHhhCCcccCCccchHHH
Confidence 999999776666544433
|
|
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.2e-22 Score=203.01 Aligned_cols=226 Identities=18% Similarity=0.205 Sum_probs=157.8
Q ss_pred hhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc------------CCCccEEEEcC
Q 041225 302 LIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL------------TPDMQQIIING 369 (658)
Q Consensus 302 ~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~------------~~~~~~i~~~g 369 (658)
++|+||||+.. ...++++++++|++|+++|++++++|||++..+..+...+++. ...+++++...
T Consensus 2 ~~DlDGTLl~~---~~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~ 78 (254)
T PF08282_consen 2 FSDLDGTLLNS---DGKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKP 78 (254)
T ss_dssp EEECCTTTCST---TSSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEES
T ss_pred EEEECCceecC---CCeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhh
Confidence 58999999997 5579999999999999999999999999999999999988864 33555666777
Q ss_pred CCHHHHHHHHHHHHHhcCcccCccccccccccch--hHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHH
Q 041225 370 NSEEECKDLLADAKARYGVKSSNRTKCNSKLKRS--AEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYI 447 (658)
Q Consensus 370 ~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 447 (658)
++.+.+..+++.+.... ...........+.... ........... ..................++. +....+....
T Consensus 79 i~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~ki~-~~~~~~~~~~ 155 (254)
T PF08282_consen 79 IDSDDVKKILKYLKEHN-ISFFFYTDDDIYIYENKDEEELFFEHKFF-NFKESIVSEDDLEDEEIFKIL-FFPDPEDLEQ 155 (254)
T ss_dssp B-HHHHHHHHHHHHHTT-CEEEEEESSEEEESSTTCHHHHHHHHHHT-SCEEEESHHHHHHCSSESEEE-EESCHHHHHH
T ss_pred eeccchhheeehhhhcc-cccccccceeeecccccccchhhhhhccc-ccccccccccccccccceeee-ccccchhhhh
Confidence 79999999999998853 2221111112222222 11111111111 000000001111122334444 5555555555
Q ss_pred HHHhhHHhhh---hhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccchhh
Q 041225 448 LEKDLESDLF---DLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQA 521 (658)
Q Consensus 448 ~~~~~~~~~~---~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~ 521 (658)
+.+.+...+. ....+.+..+++.+.+++|+.+++.|+++ +.+++++|||+.||++||+.||+|||| +|+.+.+
T Consensus 156 l~~~l~~~~~~~~~~~~~~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am-~na~~~~ 234 (254)
T PF08282_consen 156 LREELKKKFPNLIDVVRSSPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAM-GNATPEL 234 (254)
T ss_dssp HHHHHHHHHTTTEEEEEEETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEE-TTS-HHH
T ss_pred hhhhhccccCcceeEEEecccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEE-cCCCHHH
Confidence 5666665543 45667788999999999999999999987 568999999999999999999999999 6777789
Q ss_pred hhhcccccccccc
Q 041225 522 VMASDFAMGQFRF 534 (658)
Q Consensus 522 k~~AD~vl~~~~~ 534 (658)
+..||+++...+-
T Consensus 235 k~~a~~i~~~~~~ 247 (254)
T PF08282_consen 235 KKAADYITPSNND 247 (254)
T ss_dssp HHHSSEEESSGTC
T ss_pred HHhCCEEecCCCC
Confidence 9999999877654
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=2e-21 Score=196.41 Aligned_cols=231 Identities=16% Similarity=0.160 Sum_probs=144.1
Q ss_pred HHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCC-------------CccEE
Q 041225 299 TAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTP-------------DMQQI 365 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~-------------~~~~i 365 (658)
+++++|+||||++. +..++++++++|++++++|++|++||||++..+..+++.+++..+ +++++
T Consensus 4 kli~~DlDGTLl~~---~~~i~~~~~~ai~~~~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~d~~~~~~l 80 (272)
T PRK10530 4 RVIALDLDGTLLTP---KKTILPESLEALARAREAGYKVIIVTGRHHVAIHPFYQALALDTPAICCNGTYLYDYQAKKVL 80 (272)
T ss_pred cEEEEeCCCceECC---CCccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCCCEEEcCCcEEEecCCCEEE
Confidence 45789999999986 557999999999999999999999999999999999988876322 23445
Q ss_pred EEcCCCHHHHHHHHHHHHHhcCcccCccccccccccch-hHHHHHH-hhcCCC---CCCCCCCCchhhh-hc-cCcEEEE
Q 041225 366 IINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRS-AEIEYLA-ISNDAK---FSDVPQGHDVKEV-AA-IASLALI 438 (658)
Q Consensus 366 ~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~---~~~~~~~~~~~~~-~~-~~~~~l~ 438 (658)
+...++.+.+.++++.+++.- ................ ....... ...... ........+.... .. .....+.
T Consensus 81 ~~~~l~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 159 (272)
T PRK10530 81 EADPLPVQQALQVIEMLDEHQ-IHGLMYVDDAMLYEHPTGHVIRTLNWAQTLPPEQRPTFTQVDSLAQAARQVNAIWKFA 159 (272)
T ss_pred EecCCCHHHHHHHHHHHHhCC-cEEEEEcCCceEecCchHHHHHHhhhhhccchhcccceEEcccHHHHHhhcCCcEEEE
Confidence 555668899999998887641 1110000000001110 0010000 000000 0000001111111 11 1122223
Q ss_pred EeCccH--HHHHHHhhHHhh-hhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEE
Q 041225 439 IDGNSL--VYILEKDLESDL-FDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVG 512 (658)
Q Consensus 439 ~~~~~~--~~~~~~~~~~~~-~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIa 512 (658)
...+.. ...+.+.+...+ .....+....+++.+.+.+|+.+++.++++ +.+++++||||.||++|++.||+|||
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~va 239 (272)
T PRK10530 160 LTHEDLPQLQHFAKHVEHELGLECEWSWHDQVDIARKGNSKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVA 239 (272)
T ss_pred EecCCHHHHHHHHHHHhhhcCceEEEecCceEEEecCCCChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEE
Confidence 332221 112222222221 222333445789999999999999999987 56789999999999999999999999
Q ss_pred ecCccchhhhhhcccccccccc
Q 041225 513 ICGQEGRQAVMASDFAMGQFRF 534 (658)
Q Consensus 513 m~~~~~~~~k~~AD~vl~~~~~ 534 (658)
| +|+.+.+|+.||+++.+.+-
T Consensus 240 m-gna~~~lk~~Ad~v~~~n~~ 260 (272)
T PRK10530 240 M-GNADDAVKARADLVIGDNTT 260 (272)
T ss_pred e-cCchHHHHHhCCEEEecCCC
Confidence 9 56777889999999876544
|
|
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.7e-21 Score=193.33 Aligned_cols=226 Identities=18% Similarity=0.179 Sum_probs=148.2
Q ss_pred HhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCC------------CccEEEEc
Q 041225 301 ALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTP------------DMQQIIIN 368 (658)
Q Consensus 301 ~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~------------~~~~i~~~ 368 (658)
+++|+||||+.. ...+++++.++|++|+++|++++++|||++..+..+..++++..+ +++++...
T Consensus 2 i~~DlDGTLl~~---~~~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~i~~~ 78 (256)
T TIGR00099 2 IFIDLDGTLLND---DHTISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLDTPFITANGAAVIDDQGEILYKK 78 (256)
T ss_pred EEEeCCCCCCCC---CCccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCCCCEEEcCCcEEECCCCCEEeec
Confidence 468999999986 457999999999999999999999999999999999888876322 23455566
Q ss_pred CCCHHHHHHHHHHHHHhcCcccCccccccccccc--hhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHH
Q 041225 369 GNSEEECKDLLADAKARYGVKSSNRTKCNSKLKR--SAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVY 446 (658)
Q Consensus 369 g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 446 (658)
.++.+.++++++.+.+.. ...........+... ....................... .......+.++........
T Consensus 79 ~i~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 155 (256)
T TIGR00099 79 PLDLDLVEEILNFLKKHG-LDVILYGDDSIYASKNDPEYFTIFKKFLGEPKLEVVDIQY--LPDDILKILLLFLDPEDLD 155 (256)
T ss_pred CCCHHHHHHHHHHHHHcC-cEEEEEeCCeEEecCCCcchhHHHHHhccCCcceeccchh--hhcccceEEEEECCHHHHH
Confidence 678899999999887642 111111111111111 11111111111111100111000 0111223333333333333
Q ss_pred HHHHhhHH----hhhhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccch
Q 041225 447 ILEKDLES----DLFDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGR 519 (658)
Q Consensus 447 ~~~~~~~~----~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~ 519 (658)
.+.+.+.. ....+..+.+.++++.+.+++|+.+++.++++ +.+++++|||+.||++||+.|++|+|| +++.+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~s~~~~leI~~~~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~-~na~~ 234 (256)
T TIGR00099 156 LLIEALNKLELEENVSVVSSGPYSIEITAKGVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAM-GNADE 234 (256)
T ss_pred HHHHHhhhhhhcCCEEEEEecCceEEecCCCCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEe-cCchH
Confidence 33333331 12334556677899999999999999999987 567899999999999999999999999 66777
Q ss_pred hhhhhccccccccc
Q 041225 520 QAVMASDFAMGQFR 533 (658)
Q Consensus 520 ~~k~~AD~vl~~~~ 533 (658)
.+|..|++++.+.+
T Consensus 235 ~~k~~a~~~~~~n~ 248 (256)
T TIGR00099 235 ELKALADYVTDSNN 248 (256)
T ss_pred HHHHhCCEEecCCC
Confidence 89999999987644
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.2e-20 Score=183.79 Aligned_cols=98 Identities=35% Similarity=0.572 Sum_probs=88.9
Q ss_pred ccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHH
Q 041225 305 CDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKA 384 (658)
Q Consensus 305 ~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~ 384 (658)
.++++++...+.+++++++.++|+.|+++|++++|+|||+..++..+++.+|+..
T Consensus 114 ~~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~------------------------- 168 (215)
T PF00702_consen 114 VNLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD------------------------- 168 (215)
T ss_dssp ESHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS-------------------------
T ss_pred ecCeEEEEEeecCcchhhhhhhhhhhhccCcceeeeecccccccccccccccccc-------------------------
Confidence 4799999999999999999999999999999999999999999999999999821
Q ss_pred hcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCC
Q 041225 385 RYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCR 464 (658)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~ 464 (658)
T Consensus 169 -------------------------------------------------------------------------------- 168 (215)
T PF00702_consen 169 -------------------------------------------------------------------------------- 168 (215)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeEEEEc--CcccH--HHHHHHHHhcCCCeEEEEcCCcCChhhhhhcc
Q 041225 465 VVLCCRV--APLQK--AGIVDLIKSRTDDMTLAIGDGANDVSMIQMAD 508 (658)
Q Consensus 465 ~~i~~~~--~~~~K--~~~v~~L~~~~~~~v~aiGDg~NDi~Ml~~A~ 508 (658)
..++.+. +|.+| ..+++.|+.. +..|+|+|||.||++|++.||
T Consensus 169 ~~v~a~~~~kP~~k~~~~~i~~l~~~-~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 169 SIVFARVIGKPEPKIFLRIIKELQVK-PGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp EEEEESHETTTHHHHHHHHHHHHTCT-GGGEEEEESSGGHHHHHHHSS
T ss_pred ccccccccccccchhHHHHHHHHhcC-CCEEEEEccCHHHHHHHHhCc
Confidence 3467777 99999 8999998855 469999999999999999997
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.2e-20 Score=187.79 Aligned_cols=219 Identities=16% Similarity=0.153 Sum_probs=136.8
Q ss_pred HHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc-----CCCccEEE-------
Q 041225 299 TAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL-----TPDMQQII------- 366 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~-----~~~~~~i~------- 366 (658)
.++++|+|||||+. +..+++.++++|++|+++|++++++|||++..+..+++++|+. ..+|..++
T Consensus 8 ~lI~~DlDGTLL~~---~~~i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~~NGa~I~~~~~~~~ 84 (271)
T PRK03669 8 LLIFTDLDGTLLDS---HTYDWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQGLPLIAENGAVIQLDEQWQD 84 (271)
T ss_pred eEEEEeCccCCcCC---CCcCcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEEeCCCEEEecCcccC
Confidence 45789999999986 4568889999999999999999999999999999999999863 23444443
Q ss_pred -------EcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEE
Q 041225 367 -------INGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALII 439 (658)
Q Consensus 367 -------~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 439 (658)
..+.+.+.+.++++..++.......... .. . ....... ....... .............+..
T Consensus 85 ~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~--~~--~-~~~~~~~---~~~~~~~----~~~~~~~~~~~~~~~~ 152 (271)
T PRK03669 85 HPDFPRIISGISHGEIRQVLNTLREKEGFKFTTFD--DV--D-DATIAEW---TGLSRSQ----AALARLHEASVTLIWR 152 (271)
T ss_pred CCCceEeecCCCHHHHHHHHHHHHHhcCCceeecc--cC--C-HHHHHHH---hCCCHHH----HHHHhccccCceeEec
Confidence 2235778888888887654232211110 00 0 0000000 0000000 0000000111112222
Q ss_pred eCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhc------CCCeEEEEcCCcCChhhhhhcceeEEe
Q 041225 440 DGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSR------TDDMTLAIGDGANDVSMIQMADVGVGI 513 (658)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~------~~~~v~aiGDg~NDi~Ml~~A~vgIam 513 (658)
...+....+.+.+......+.. ...++++.+.+++|+.+++.|+++ +.++|+|||||.||++||+.||+||||
T Consensus 153 ~~~~~~~~~~~~l~~~~~~~~~-~~~~iEi~~~g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM 231 (271)
T PRK03669 153 DSDERMAQFTARLAELGLQFVQ-GARFWHVLDASAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVV 231 (271)
T ss_pred CCHHHHHHHHHHHHHCCCEEEe-cCeeEEEecCCCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEe
Confidence 2222222233333332233333 345789999999999999999986 357899999999999999999999999
Q ss_pred cCccchh-----hhhhccccccccc
Q 041225 514 CGQEGRQ-----AVMASDFAMGQFR 533 (658)
Q Consensus 514 ~~~~~~~-----~k~~AD~vl~~~~ 533 (658)
.++..+. .+..||++...-.
T Consensus 232 ~~~~~~~~~l~~~~~~~~~~~~~~~ 256 (271)
T PRK03669 232 KGLNREGVHLQDDDPARVYRTQREG 256 (271)
T ss_pred cCCCCCCcccccccCCceEeccCCC
Confidence 5333221 3457888776543
|
|
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.9e-20 Score=182.01 Aligned_cols=196 Identities=20% Similarity=0.221 Sum_probs=128.4
Q ss_pred HHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCC--------
Q 041225 299 TAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGN-------- 370 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~-------- 370 (658)
+++++|+||||++. +..+++.+.++|++++++|++++++|||++..+..+++.+++.. .++..||.
T Consensus 4 kli~~DlDGTLl~~---~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~---~~i~~nGa~i~~~~~~ 77 (230)
T PRK01158 4 KAIAIDIDGTITDK---DRRLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSG---PVIAENGGVISVGFDG 77 (230)
T ss_pred eEEEEecCCCcCCC---CCccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCC---cEEEecCeEEEEcCCC
Confidence 45679999999986 45799999999999999999999999999999999999988642 34444443
Q ss_pred ------CHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccH
Q 041225 371 ------SEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSL 444 (658)
Q Consensus 371 ------~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 444 (658)
+.+.+.++++.....+..... .+...... . ..... .+......
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~--~----~~~~~-~~~~~~~~ 126 (230)
T PRK01158 78 KRIFLGDIEECEKAYSELKKRFPEAST------------------------SLTKLDPD--Y----RKTEV-ALRRTVPV 126 (230)
T ss_pred CEEEEcchHHHHHHHHHHHHhccccce------------------------eeecCCcc--c----cccee-eecccccH
Confidence 112333444433322110000 00000000 0 00001 11111111
Q ss_pred HHHHHHhhHHhh--hhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccch
Q 041225 445 VYILEKDLESDL--FDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGR 519 (658)
Q Consensus 445 ~~~~~~~~~~~~--~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~ 519 (658)
....+.+.... ..+.. ....+++.+.+++|+.+++.++++ +++++++||||.||++||+.|++|||| +|+.+
T Consensus 127 -~~~~~~l~~~~~~~~~~~-~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~vam-~Na~~ 203 (230)
T PRK01158 127 -EEVRELLEELGLDLEIVD-SGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVAAIGDSENDLEMFEVAGFGVAV-ANADE 203 (230)
T ss_pred -HHHHHHHHHcCCcEEEEe-cceEEEEeeCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhcCceEEe-cCccH
Confidence 11222222111 11222 234689999999999999999987 567899999999999999999999999 77888
Q ss_pred hhhhhcccccccccc
Q 041225 520 QAVMASDFAMGQFRF 534 (658)
Q Consensus 520 ~~k~~AD~vl~~~~~ 534 (658)
.+|++||+|+.+.+-
T Consensus 204 ~vk~~a~~v~~~n~~ 218 (230)
T PRK01158 204 ELKEAADYVTEKSYG 218 (230)
T ss_pred HHHHhcceEecCCCc
Confidence 899999999876544
|
|
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=99.81 E-value=1e-19 Score=176.76 Aligned_cols=201 Identities=18% Similarity=0.183 Sum_probs=126.6
Q ss_pred HHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHH-HHH
Q 041225 300 AALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEEC-KDL 378 (658)
Q Consensus 300 ~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~-~~i 378 (658)
++++|+||||++. +..+++++.++|++|+++|++++++|||++..+..+++.+++.. .++..||.-.-.- ..+
T Consensus 3 ~v~~DlDGTLl~~---~~~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~---~~i~~NGa~i~~~~~~~ 76 (215)
T TIGR01487 3 LVAIDIDGTLTEP---NRMISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSG---PVVAENGGVIFYNKEDI 76 (215)
T ss_pred EEEEecCCCcCCC---CcccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCC---cEEEccCcEEEeCCCcE
Confidence 4678999999986 45799999999999999999999999999999999999888632 3555555310000 000
Q ss_pred HHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhh
Q 041225 379 LADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFD 458 (658)
Q Consensus 379 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 458 (658)
. ... ..................... . .. ......+....... ..+...+......
T Consensus 77 ~----------~~~--------~~~~~~~~~~~~~~~~~~~~~--~---~~-~~~~~~~~~~~~~~-~~~~~~l~~~~~~ 131 (215)
T TIGR01487 77 F----------LAN--------MEEEWFLDEEKKKRFPRDRLS--N---EY-PRASLVIMREGKDV-DEVREIIKERGLN 131 (215)
T ss_pred E----------Eec--------ccchhhHHHhhhhhhhhhhcc--c---cc-ceeEEEEecCCccH-HHHHHHHHhCCeE
Confidence 0 000 000000000000000000000 0 00 00111222223222 2233333332223
Q ss_pred hhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhccccccccc
Q 041225 459 LATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFR 533 (658)
Q Consensus 459 i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~ 533 (658)
...+ ...+++.+.+.+|+.+++.++++ +.+++++||||.||++||+.|++|||| +|+.+++|+.||+++.+.+
T Consensus 132 ~~~~-~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ml~~ag~~vam-~na~~~~k~~A~~v~~~~~ 207 (215)
T TIGR01487 132 LVDS-GFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDIDLFRVVGFKVAV-ANADDQLKEIADYVTSNPY 207 (215)
T ss_pred EEec-CceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCeEEc-CCccHHHHHhCCEEcCCCC
Confidence 3333 45689999999999999999987 456799999999999999999999999 7778889999999986543
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.9e-19 Score=176.57 Aligned_cols=205 Identities=17% Similarity=0.130 Sum_probs=123.5
Q ss_pred hhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHH
Q 041225 302 LIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLAD 381 (658)
Q Consensus 302 ~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~ 381 (658)
++|+||||++. +..+++.+.++|++++++|++++++|||++..+..+++.+++. ..+|..||.-......
T Consensus 2 ~~DlDGTLl~~---~~~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~---~~~i~~nGa~i~~~~~---- 71 (225)
T TIGR01482 2 ASDIDGTLTDP---NRAINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTP---DPVIAENGGEISYNEG---- 71 (225)
T ss_pred eEeccCccCCC---CcccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCC---CeEEEecCcEEEeCCC----
Confidence 57999999986 4579999999999999999999999999999999999998852 3456666641000000
Q ss_pred HHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhh-h
Q 041225 382 AKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDL-A 460 (658)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i-~ 460 (658)
.. ....... ........................ .......+.... ... .....+....... .
T Consensus 72 -~~---------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~ 134 (225)
T TIGR01482 72 -MD---------DIFLAYL-EEEWFLDIVIAKTFPFSRLKVQYP----RRASLVKMRYGI-DVD-TVREIIKELGLNLVA 134 (225)
T ss_pred -Cc---------eEEeccc-CHHHHHHHHHhcccchhhhccccc----cccceEEEeecC-CHH-HHHHHHHhcCceEEE
Confidence 00 0000000 000000000000000000000000 000111111111 111 1111111110111 1
Q ss_pred ccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhcccccccccc
Q 041225 461 TSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRF 534 (658)
Q Consensus 461 ~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~ 534 (658)
.+....+++.+.+.+|+.+++.++++ +.+++++|||+.||++||+.|++|||| +|+.+.+|+.||+|..+...
T Consensus 135 ~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~vam-~Na~~~~k~~A~~vt~~~~~ 210 (225)
T TIGR01482 135 VDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDSENDIDLFEVPGFGVAV-ANAQPELKEWADYVTESPYG 210 (225)
T ss_pred ecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCCHhhHHHHHhcCceEEc-CChhHHHHHhcCeecCCCCC
Confidence 13456789999999999999999987 567899999999999999999999999 77777899999999865443
|
catalyze the same reaction as SPP. |
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=99.77 E-value=6e-18 Score=168.86 Aligned_cols=215 Identities=15% Similarity=0.080 Sum_probs=134.1
Q ss_pred HhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc----CCCccEEE----------
Q 041225 301 ALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL----TPDMQQII---------- 366 (658)
Q Consensus 301 ~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~----~~~~~~i~---------- 366 (658)
+++|+||||++. +....+.+.++|++|+++|++++++|||++..+..+.+++|+. ..+|..++
T Consensus 2 i~~DlDGTll~~---~~~~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~~~~ 78 (256)
T TIGR01486 2 IFTDLDGTLLDP---HGYDWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRGWFTEPE 78 (256)
T ss_pred EEEcCCCCCcCC---CCcCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCCcccCCC
Confidence 468999999985 3324557999999999999999999999999999999998863 23443333
Q ss_pred ----EcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCc
Q 041225 367 ----INGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGN 442 (658)
Q Consensus 367 ----~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 442 (658)
....+.+.++++++.............. ... ....... ...... ...........+.. +. ..
T Consensus 79 ~~~~~~~i~~~~~~~il~~~~~~~~~~~~~~~--~~~---~~~~~~~---~~~~~~----~~~~~~~~~~~~~~-~~-~~ 144 (256)
T TIGR01486 79 YPVIALGIPYEKIRARLEELSEELGFKFRGLG--DLT---DAEIAEL---TGLSRE----LAALAQRREYSETI-LW-SE 144 (256)
T ss_pred eEEEEcCCCHHHHHHHHHHHHHHhCCCccchh--hCC---HHHHHHH---hCcCHH----HHHHHhhCccCCce-ec-Ch
Confidence 3345677788888765443222111100 000 0000000 000000 00000001122222 22 33
Q ss_pred cHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhc---C--CCeEEEEcCCcCChhhhhhcceeEEecCcc
Q 041225 443 SLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSR---T--DDMTLAIGDGANDVSMIQMADVGVGICGQE 517 (658)
Q Consensus 443 ~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~--~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~ 517 (658)
+....+...+......+..+ ...+++.+.+.+|+.+++.++++ + .+++++||||.||++||+.||+|||| +|+
T Consensus 145 ~~~~~~~~~~~~~~~~~~~s-~~~~ei~~~~~~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam-~Na 222 (256)
T TIGR01486 145 ERRERFTEALVELGLEVTHG-NRFYHVLGAGSDKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVV-PGP 222 (256)
T ss_pred HHHHHHHHHHHHcCCEEEeC-CceEEEecCCCCHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEe-CCC
Confidence 33333333333322333333 35889999999999999999988 5 78899999999999999999999999 445
Q ss_pred c---hhhhhh--c-ccccccccc
Q 041225 518 G---RQAVMA--S-DFAMGQFRF 534 (658)
Q Consensus 518 ~---~~~k~~--A-D~vl~~~~~ 534 (658)
. +.+|+. | ++|..+.+.
T Consensus 223 ~~~~~~lk~~~~a~~~vt~~~~~ 245 (256)
T TIGR01486 223 NGPNVSLKPGDPGSFLLTPAPGP 245 (256)
T ss_pred CCCccccCccCCCcEEEcCCCCc
Confidence 4 468886 4 477765443
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.76 E-value=3.1e-18 Score=172.46 Aligned_cols=213 Identities=18% Similarity=0.151 Sum_probs=135.9
Q ss_pred HHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCC----CccEEE--------
Q 041225 299 TAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTP----DMQQII-------- 366 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~----~~~~i~-------- 366 (658)
+++++|+|||||+. ++.+.++++++|++|+++|++++++|||++..+..+++++|+..+ ++.+++
T Consensus 5 kli~~DlDGTLl~~---~~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~~~~i~~nGa~i~~~~~~~~~ 81 (273)
T PRK00192 5 LLVFTDLDGTLLDH---HTYSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLEDPFIVENGAAIYIPKNYFPF 81 (273)
T ss_pred eEEEEcCcccCcCC---CCcCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCEEEEcCcEEEeccccccc
Confidence 46789999999986 457888999999999999999999999999999999999987432 333333
Q ss_pred --------------EcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhcc
Q 041225 367 --------------INGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAI 432 (658)
Q Consensus 367 --------------~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (658)
..+.+.+.+.++++.+.+.+...... +.... ....... ...... ..........
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~--~~~~~---~~~~~~~---~~~~~~----~~~~~~~~~~ 149 (273)
T PRK00192 82 QPDGERLKGDYWVIELGPPYEELREILDEISDELGYPLKG--FGDLS---AEEVAEL---TGLSGE----SARLAKDREF 149 (273)
T ss_pred CCccccccCCceEEEcCCCHHHHHHHHHHHHHHhCCCeee--hhhCC---HHHHHHH---hCcCHH----HHHHHHhccc
Confidence 33456778888887665543322111 00000 0000000 000000 0000000111
Q ss_pred CcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhc---CC-CeEEEEcCCcCChhhhhhcc
Q 041225 433 ASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TD-DMTLAIGDGANDVSMIQMAD 508 (658)
Q Consensus 433 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~-~~v~aiGDg~NDi~Ml~~A~ 508 (658)
....+..........+...+......+.. ++.++++.+.+ +|+.+++.+.++ +. +.|++||||.||++|++.||
T Consensus 150 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~ei~~~~-~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag 227 (273)
T PRK00192 150 SEPFLWNGSEAAKERFEEALKRLGLKVTR-GGRFLHLLGGG-DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAAD 227 (273)
T ss_pred CCceeecCchHHHHHHHHHHHHcCCEEEE-CCeEEEEeCCC-CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCC
Confidence 11222122333333334434332222333 35688999999 999999999987 67 89999999999999999999
Q ss_pred eeEEecCccchhhh----hhc-cccc
Q 041225 509 VGVGICGQEGRQAV----MAS-DFAM 529 (658)
Q Consensus 509 vgIam~~~~~~~~k----~~A-D~vl 529 (658)
+|||| +|+.+++| .+| +.+.
T Consensus 228 ~~vam-~NA~~~~k~~~~~~a~~~v~ 252 (273)
T PRK00192 228 IAVVV-PGPDGPNPPLLPGIADGEFI 252 (273)
T ss_pred eeEEe-CCCCCCCcccCccccCCceE
Confidence 99999 77776788 666 5665
|
|
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=99.72 E-value=5.7e-17 Score=158.31 Aligned_cols=196 Identities=22% Similarity=0.166 Sum_probs=119.9
Q ss_pred HhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc-C----CCccEEE---------
Q 041225 301 ALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL-T----PDMQQII--------- 366 (658)
Q Consensus 301 ~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~-~----~~~~~i~--------- 366 (658)
+++|+|||||+. +....+.++++|++|+++|++++++|||++..+..+.+.+++. . .+|..++
T Consensus 2 i~~DlDGTLL~~---~~~~~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~~~~~~~~ 78 (221)
T TIGR02463 2 VFSDLDGTLLDS---HSYDWQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLTGDPYIAENGAAIHLEELWREEP 78 (221)
T ss_pred EEEeCCCCCcCC---CCCCcHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCcEEEeCCcEEEcCcccccCC
Confidence 468999999985 3335555999999999999999999999999999999999864 1 1222222
Q ss_pred -----EcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEE-e
Q 041225 367 -----INGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALII-D 440 (658)
Q Consensus 367 -----~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~ 440 (658)
..+.+.+.+.++++...+.......... .... ...... ...... ......... ....+.. .
T Consensus 79 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~--~~~~---~~~~~~---~~~~~~----~~~~~~~~~-~~~~~~~~~ 145 (221)
T TIGR02463 79 GYPRIILGISYGIIRLVLETLSEELHFKFTPFD--DLSD---AEIAEL---TGLSGS----QAALAQDRE-ASVPLLWRD 145 (221)
T ss_pred CceEEecCCCHHHHHHHHHHHHHHhCCCceehh--hCCH---HHHHHH---hCcCHH----HHHHHHhcc-CCccEEecC
Confidence 1233556667777665543222111110 0000 000000 000000 000000001 1222333 2
Q ss_pred CccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEe
Q 041225 441 GNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGI 513 (658)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam 513 (658)
..+....+.+.+......+.. .+..+++.+.+.+|+.+++.++++ +.++|++||||.||++||+.||+|||+
T Consensus 146 ~~~~~~~~~~~l~~~~~~~~~-~~~~~ei~~~~~~Kg~al~~l~~~lgi~~~~vi~~GD~~NDi~ml~~ag~~va~ 220 (221)
T TIGR02463 146 SDSRMPRFTALLADLGLAIVQ-GNRFSHVLGASSSKGKAANWLKATYNQPDVKTLGLGDGPNDLPLLEVADYAVVI 220 (221)
T ss_pred chhHHHHHHHHHHHcCCeEEe-cCCeeEEecCCCCHHHHHHHHHHHhCCCCCcEEEECCCHHHHHHHHhCCceEEe
Confidence 233333333333332233333 356789999999999999999987 678899999999999999999999997
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.9e-17 Score=176.35 Aligned_cols=213 Identities=13% Similarity=0.083 Sum_probs=135.4
Q ss_pred HHHHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc----CCC-----------
Q 041225 297 RQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL----TPD----------- 361 (658)
Q Consensus 297 ~~~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~----~~~----------- 361 (658)
-+.++++|+||||++. ++.+.+.+.++|++|+++|+.++++|||+...+..+++.+++. ..+
T Consensus 415 ~~KLIfsDLDGTLLd~---d~~i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~~~~I~eNGA~I~~~~~~~ 491 (694)
T PRK14502 415 FKKIVYTDLDGTLLNP---LTYSYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIKDPFITENGGAIFIPKDYF 491 (694)
T ss_pred eeeEEEEECcCCCcCC---CCccCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCeEEEcCCCEEEECCCcc
Confidence 3467899999999986 4457778999999999999999999999999999999988852 222
Q ss_pred -----------ccEEEEcCCCHHHHHHHHHHHHHhcCcccCcc-ccccccccc--hhHHHHHHhhcCCCCCCCCCCCchh
Q 041225 362 -----------MQQIIINGNSEEECKDLLADAKARYGVKSSNR-TKCNSKLKR--SAEIEYLAISNDAKFSDVPQGHDVK 427 (658)
Q Consensus 362 -----------~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (658)
++++...+.+.+.++++++..++......... .....+... +............... .... .
T Consensus 492 ~~~~~~~~~~~~~iI~~~~l~~e~i~~IL~~lke~l~~~i~ihv~~~~~~i~~~~d~~~~ei~~~TgL~~~---~a~~-a 567 (694)
T PRK14502 492 RLPFAYDRVAGNYLVIELGMAYKDIRHILKKALAEACTEIENSEKAGNIFITSFGDMSVEDVSRLTDLNLK---QAEL-A 567 (694)
T ss_pred cccccccccCCCeEEEEcCCCHHHHHHHHHHHHHhhcceeeeeeccCcEEEecCCcccHHHHHHhhCCCHH---HHHH-H
Confidence 23455567788899999998877432111100 000011111 1101111111110000 0000 0
Q ss_pred hhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEE--cCCcCChh
Q 041225 428 EVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAI--GDGANDVS 502 (658)
Q Consensus 428 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~ai--GDg~NDi~ 502 (658)
.........+..+.++....+...+......+.. ++.++++. .+++|+.+++.|+++ +.+++++| |||.||++
T Consensus 568 ~~Re~seKIl~~gd~e~Leel~~~L~~~~l~v~~-g~rfleI~-~gvdKG~AL~~L~e~~gI~~~eViafalGDs~NDis 645 (694)
T PRK14502 568 KQREYSETVHIEGDKRSTNIVLNHIQQSGLEYSF-GGRFYEVT-GGNDKGKAIKILNELFRLNFGNIHTFGLGDSENDYS 645 (694)
T ss_pred hhccCceeEEEcCCHHHHHHHHHHHHHcCcEEEE-CCEEEEeC-CCCCHHHHHHHHHHHhCCCccceEEEEcCCcHhhHH
Confidence 0011112333344445555555555554444444 67778877 699999999999988 44678888 99999999
Q ss_pred hhhhcceeEEecCccc
Q 041225 503 MIQMADVGVGICGQEG 518 (658)
Q Consensus 503 Ml~~A~vgIam~~~~~ 518 (658)
||+.||+||||++...
T Consensus 646 MLe~Ag~gVAM~~~~~ 661 (694)
T PRK14502 646 MLETVDSPILVQRPGN 661 (694)
T ss_pred HHHhCCceEEEcCCCC
Confidence 9999999999965554
|
|
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.2e-17 Score=165.31 Aligned_cols=214 Identities=13% Similarity=0.133 Sum_probs=124.7
Q ss_pred HHHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHc------CccCCCccEE------
Q 041225 298 QTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSC------KLLTPDMQQI------ 365 (658)
Q Consensus 298 ~~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~------gl~~~~~~~i------ 365 (658)
.+++++|+|||||+. +.++++.++++|++++++|++|++||||++..+....... -++..+|.++
T Consensus 5 ~klia~DlDGTLL~~---~~~is~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~l~~~~~~~~~~~I~~NGa~I~~~~~~ 81 (247)
T PTZ00174 5 KTILLFDVDGTLTKP---RNPITQEMKDTLAKLKSKGFKIGVVGGSDYPKIKEQLGEDVLEDFDYVFSENGLVAYKDGEL 81 (247)
T ss_pred CeEEEEECcCCCcCC---CCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHhhhhhcccCeEEeCCceEEEECCeE
Confidence 356789999999987 5689999999999999999999999999998876655422 1233333333
Q ss_pred -EEcC----CCHHHHHHHHHHHHHhc-CcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEE
Q 041225 366 -IING----NSEEECKDLLADAKARY-GVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALII 439 (658)
Q Consensus 366 -~~~g----~~~~~~~~ii~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 439 (658)
+.+. .+.+.+.++++...... ..... .....+....... .. .................. ..
T Consensus 82 i~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~-----~~---~~~~~~~~~~~~~~~~~~---~~ 148 (247)
T PTZ00174 82 FHSQSILKFLGEEKLKKFINFCLRYIADLDIP--VKRGTFIEYRNGM-----IN---ISPIGRNCSQEERDEFEK---YD 148 (247)
T ss_pred EEEEcchhcCCHHHHHHHHHHHHHHHHhcCCc--cceeeeEEcCCce-----EE---eccccccCCHHHHHHHHh---cC
Confidence 3332 24577888887765431 11110 0000000000000 00 000000000000000000 11
Q ss_pred eCccHHHHHHHhhHHhhh--hhhcc--CCeeEEEEcCcccHHHHHHHHHhcCCCeEEEEcC----CcCChhhhhhc-cee
Q 041225 440 DGNSLVYILEKDLESDLF--DLATS--CRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGD----GANDVSMIQMA-DVG 510 (658)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~--~i~~s--~~~~i~~~~~~~~K~~~v~~L~~~~~~~v~aiGD----g~NDi~Ml~~A-~vg 510 (658)
........+.+.+...+. .+..+ ++.++++.+.+++|+.+|+.|+++ .++|+|||| |.||++||+.| -.|
T Consensus 149 ~~~~~~~~~~~~l~~~~~~~~~~~s~~~~~~leI~~~gvsKg~al~~L~~~-~~eviafGD~~~~~~NDieMl~~~~~~g 227 (247)
T PTZ00174 149 KEHHIREKFIQDLKKEFSDLGLKFSIGGQISFDVFPKGWDKTYCLRHLEND-FKEIHFFGDKTFEGGNDYEIYNDPRTIG 227 (247)
T ss_pred CcchHHHHHHHHHHHhcCCCCeEEEecCceEEEeeeCCCcHHHHHHHHHhh-hhhEEEEcccCCCCCCcHhhhhcCCCce
Confidence 111111222233333222 22223 246899999999999999999998 789999999 99999999965 456
Q ss_pred EEecCccchhhhhhccccc
Q 041225 511 VGICGQEGRQAVMASDFAM 529 (658)
Q Consensus 511 Iam~~~~~~~~k~~AD~vl 529 (658)
+++ +|+.+.+|..|.++.
T Consensus 228 ~~v-~n~~~~~~~~~~~~~ 245 (247)
T PTZ00174 228 HSV-KNPEDTIKILKELFL 245 (247)
T ss_pred EEe-CCHHHHHHHHHHHhc
Confidence 666 366666777776543
|
|
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=99.69 E-value=2e-16 Score=153.64 Aligned_cols=192 Identities=15% Similarity=0.153 Sum_probs=121.8
Q ss_pred HhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccC----CC---------------
Q 041225 301 ALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLT----PD--------------- 361 (658)
Q Consensus 301 ~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~----~~--------------- 361 (658)
+++|+||||+.. +...++++++|++|+++|++++++|||++..+..+..++|+.. .+
T Consensus 2 i~~DlDGTLl~~----~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~~~~I~~NGa~I~~~~~~~~~~~ 77 (225)
T TIGR02461 2 IFTDLDGTLLPP----GYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVEPPFIVENGGAIFIPRGYFPFPV 77 (225)
T ss_pred EEEeCCCCCcCC----CCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCcEEEcCCcEEEecCccccccc
Confidence 468999999983 3566789999999999999999999999999999999988632 22
Q ss_pred -------ccEEEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCc
Q 041225 362 -------MQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIAS 434 (658)
Q Consensus 362 -------~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (658)
++.++..+.+.+.++++++.+++.+++..... . . ........ ...... ..........+
T Consensus 78 ~~~~~~~~~~i~~~~l~~~~~~~il~~~~~~~~~~~~~~----~--~-~~~~~~~~---~~~~~~----~~~~~~~~~~k 143 (225)
T TIGR02461 78 GAGREVGNYEVIELGKPVAKIRAALKEAENEYGLKYYGN----S--T-AEEVEKLT---GLPREL----APLAKRREYSE 143 (225)
T ss_pred cccccCCCeEEEEcCCCHHHHHHHHHHHHHhcCccchhc----C--C-HHHHHHHH---CcCHHH----HHHHHhhhcCC
Confidence 23355667788999999988877433221110 0 0 00000000 000000 00000111122
Q ss_pred EEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhc-----CCCeEEEEcCCcCChhhhhhcce
Q 041225 435 LALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSR-----TDDMTLAIGDGANDVSMIQMADV 509 (658)
Q Consensus 435 ~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~-----~~~~v~aiGDg~NDi~Ml~~A~v 509 (658)
. ++...++....+.+.++.....+..+.+. +++ +.+.+|+.+++.++++ +...+++|||+.||++||+.||+
T Consensus 144 i-~~~~~~e~~~~~~~~~~~~~~~~~~s~~~-~~i-~~~~sK~~al~~l~~~~~~~~~~~~~i~~GD~~nD~~ml~~ag~ 220 (225)
T TIGR02461 144 T-IFLWSREGWEAILVTARARGLKYTHGGRF-YTV-HGGSDKGKAIKRLLDLYKLRPGAIESVGLGDSENDFPMFEVVDL 220 (225)
T ss_pred c-ccCCCHHHHHHHHHHHHHcCCcEEECCEE-EEE-CCCCCHHHHHHHHHHHhccccCcccEEEEcCCHHHHHHHHhCCC
Confidence 2 23333333333333333333444555444 444 5599999999999876 23479999999999999999999
Q ss_pred eEEe
Q 041225 510 GVGI 513 (658)
Q Consensus 510 gIam 513 (658)
||++
T Consensus 221 ~v~v 224 (225)
T TIGR02461 221 AFLV 224 (225)
T ss_pred cEec
Confidence 9987
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=99.67 E-value=3.1e-16 Score=155.74 Aligned_cols=201 Identities=17% Similarity=0.173 Sum_probs=125.7
Q ss_pred HHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCH-------
Q 041225 300 AALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSE------- 372 (658)
Q Consensus 300 ~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~------- 372 (658)
+++.|+|||||+...-+.+++|++.+++++++++|+.++++|||++..+..+.+++++..++ .+|..||..-
T Consensus 3 li~tDlDGTLl~~~~~~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~-~~I~~NGa~I~~~~~~~ 81 (249)
T TIGR01485 3 LLVSDLDNTLVDHTDGDNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPD-IWVTSVGSEIYYGGAEV 81 (249)
T ss_pred EEEEcCCCcCcCCCCCChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCC-EEEEcCCceEEeCCCCc
Confidence 35689999999632115678899999999999999999999999999999999988876553 3444555410
Q ss_pred --HHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHH--
Q 041225 373 --EECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYIL-- 448 (658)
Q Consensus 373 --~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-- 448 (658)
......+... +. . ...... ...+........ ......++.+..+.......+
T Consensus 82 ~~~~~~~~~~~~---------------~~--~-~~~~~~----~~~~~~l~~~~~--~~~~~~k~~~~~~~~~~~~~~~~ 137 (249)
T TIGR01485 82 PDQHWAEYLSEK---------------WQ--R-DIVVAI----TDKFEELKPQPD--LEQRPHKVSFFLDPEAAPEVIKQ 137 (249)
T ss_pred CCHHHHHHHhcc---------------cC--H-HHHHHH----HhcCcccccCCc--cccCCeeEEEEechhhhhHHHHH
Confidence 0001100000 00 0 000000 001111110000 012344555554433322222
Q ss_pred -HHhhHHh--hhhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhh-cceeEEecCccchhh
Q 041225 449 -EKDLESD--LFDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQM-ADVGVGICGQEGRQA 521 (658)
Q Consensus 449 -~~~~~~~--~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~-A~vgIam~~~~~~~~ 521 (658)
.+.+... ...++.++..++++.+.+.+|+.+++.|+++ +.+++++|||+.||++||+. ++.||+| +|+.+++
T Consensus 138 l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~-~na~~~~ 216 (249)
T TIGR01485 138 LTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIV-SNAQEEL 216 (249)
T ss_pred HHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHHcCCCccCEEEEECChhHHHHHHccCCcEEEE-CCCHHHH
Confidence 2222221 1223455667899999999999999999987 56899999999999999998 6799999 6676667
Q ss_pred hhhcc
Q 041225 522 VMASD 526 (658)
Q Consensus 522 k~~AD 526 (658)
|+.++
T Consensus 217 k~~~~ 221 (249)
T TIGR01485 217 LQWYD 221 (249)
T ss_pred HHHHH
Confidence 76543
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=99.67 E-value=2.5e-16 Score=155.22 Aligned_cols=205 Identities=17% Similarity=0.181 Sum_probs=124.8
Q ss_pred HhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHH---H--
Q 041225 301 ALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEE---C-- 375 (658)
Q Consensus 301 ~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~---~-- 375 (658)
+++|+||||++. +..+++.+ ++++ ++++|++++++|||++..+..+...+++..++ .+|..||...-. .
T Consensus 2 i~~DlDgTLl~~---~~~~~~~~-~~~~-~~~~gi~~viaTGR~~~~v~~~~~~l~l~~~~-~~I~~nGa~i~~~~~~~~ 75 (236)
T TIGR02471 2 IITDLDNTLLGD---DEGLASFV-ELLR-GSGDAVGFGIATGRSVESAKSRYAKLNLPSPD-VLIARVGTEIYYGPELQP 75 (236)
T ss_pred eEEeccccccCC---HHHHHHHH-HHHH-hcCCCceEEEEeCCCHHHHHHHHHhCCCCCCC-EEEECCCceEEeCCCCCC
Confidence 468999999985 44676655 6776 79999999999999999999999999875332 566666652100 0
Q ss_pred HHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCcc--HHHHHHHhhH
Q 041225 376 KDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNS--LVYILEKDLE 453 (658)
Q Consensus 376 ~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~ 453 (658)
.......... .+. . ......... ..... ... .......++.+...++. ....+...+.
T Consensus 76 ~~~~~~~~~~-----------~~~--~-~~~~~~~~~----~~~~~-~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~l~ 135 (236)
T TIGR02471 76 DRFWQKHIDH-----------DWR--R-QAVVEALAD----IPGLT-LQD-DQEQGPFKISYLLDPEGEPILPQIRQRLR 135 (236)
T ss_pred ChhHHHHHhc-----------CCC--H-HHHHHHHhc----CCCcE-eCC-hhcCCCeeEEEEECcccchHHHHHHHHHH
Confidence 0000000000 000 0 000110000 00000 000 01112344444444432 1112222222
Q ss_pred Hhhh--hhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhcc--
Q 041225 454 SDLF--DLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASD-- 526 (658)
Q Consensus 454 ~~~~--~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD-- 526 (658)
.... .+..++...+++.+.+.+|+.+++.|+++ +.+.+++|||+.||++||+.+++||+| +|+.+++|+.|+
T Consensus 136 ~~~~~~~~~~~~~~~~ei~~~~~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav-~na~~~~k~~a~~~ 214 (236)
T TIGR02471 136 QQSQAAKVILSCGWFLDVLPLRASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVV-GNHDPELEGLRHQQ 214 (236)
T ss_pred hccCCEEEEEECCceEEEeeCCCChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEE-cCCcHHHHHhhcCC
Confidence 2111 23344556789999999999999999987 456899999999999999999999999 677778999999
Q ss_pred --cccccc
Q 041225 527 --FAMGQF 532 (658)
Q Consensus 527 --~vl~~~ 532 (658)
+|....
T Consensus 215 ~~~v~~~~ 222 (236)
T TIGR02471 215 RIYFANNP 222 (236)
T ss_pred cEEEcCCC
Confidence 665543
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=99.64 E-value=5.3e-16 Score=163.31 Aligned_cols=200 Identities=18% Similarity=0.196 Sum_probs=124.1
Q ss_pred HHHhhhccceeeeccccccccCCChHHHH-HHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCC------
Q 041225 299 TAALIECDLTLLGATGIEDKLQDGVPEAI-EALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNS------ 371 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~d~l~~~~~~aI-~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~------ 371 (658)
.+++.|+|||||+..+ ..++++....++ ++++++|+.++++|||++..+..+.+..++..++ .+|..||..
T Consensus 10 ~lI~sDLDGTLL~~~~-~~~~s~~~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~-~~I~~nGt~I~~~~~ 87 (413)
T PLN02382 10 LMIVSDLDHTMVDHHD-PENLSLLRFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPD-ITIMSVGTEIAYGES 87 (413)
T ss_pred EEEEEcCCCcCcCCCC-ccchhHHHHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCC-EEEEcCCcEEEeCCC
Confidence 3567899999997521 125665566666 8899999999999999999999999999987764 233334431
Q ss_pred ---HHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHH
Q 041225 372 ---EEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYIL 448 (658)
Q Consensus 372 ---~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 448 (658)
.......++. .. . .....+... .+.... .+....+...++.+..+.......
T Consensus 88 ~~~d~~w~~~l~~---~w------------~--~~~v~~~~~-----~~~~l~--~q~~~~~~~~Ki~~~~~~~~~~~~- 142 (413)
T PLN02382 88 MVPDHGWVEYLNK---KW------------D--REIVVEETS-----KFPELK--LQPETEQRPHKVSFYVDKKKAQEV- 142 (413)
T ss_pred CccChhHHHHHhc---cC------------C--hhhHHHHHh-----cCCCcc--cCCcccCCCeEEEEEechHHhHHH-
Confidence 1111111110 00 0 000000000 000000 000011234455555544333222
Q ss_pred HHhhHHhh------hhhhccCCeeEEEEcCcccHHHHHHHHHhc------CCCeEEEEcCCcCChhhhhhcc-eeEEecC
Q 041225 449 EKDLESDL------FDLATSCRVVLCCRVAPLQKAGIVDLIKSR------TDDMTLAIGDGANDVSMIQMAD-VGVGICG 515 (658)
Q Consensus 449 ~~~~~~~~------~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~------~~~~v~aiGDg~NDi~Ml~~A~-vgIam~~ 515 (658)
...+...+ ..++.++...+++.+.+.+|+.+++.|+++ +.+++++||||.||++||+.++ +||+| +
T Consensus 143 ~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam-~ 221 (413)
T PLN02382 143 IKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMV-S 221 (413)
T ss_pred HHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEE-c
Confidence 22222222 234456677899999999999999999887 3568999999999999999999 79999 7
Q ss_pred ccchhhhhhcc
Q 041225 516 QEGRQAVMASD 526 (658)
Q Consensus 516 ~~~~~~k~~AD 526 (658)
|+.+++|+.++
T Consensus 222 NA~~elk~~a~ 232 (413)
T PLN02382 222 NAQEELLQWYA 232 (413)
T ss_pred CCcHHHHHHHH
Confidence 77777887543
|
|
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.61 E-value=2.8e-15 Score=145.44 Aligned_cols=201 Identities=15% Similarity=0.122 Sum_probs=119.8
Q ss_pred HHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCC----CccEEE---------
Q 041225 300 AALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTP----DMQQII--------- 366 (658)
Q Consensus 300 ~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~----~~~~i~--------- 366 (658)
++++|+|||||+. ++.+.+.+.++|++|+++||.|+++|||....+..+.+++++..+ ++..|+
T Consensus 3 LIftDLDGTLLd~---~~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~p~I~eNGA~I~~p~~~~~~~ 79 (302)
T PRK12702 3 LVLSSLDGSLLDL---EFNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEHPFICEDGSAIYVPEHYFPAG 79 (302)
T ss_pred EEEEeCCCCCcCC---CCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCCeEEEeCCcEEEEcccccccc
Confidence 4688999999996 557888899999999999999999999999999999999997432 222222
Q ss_pred ---------------EcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhc
Q 041225 367 ---------------INGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAA 431 (658)
Q Consensus 367 ---------------~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (658)
.-|.+...++.+++.+...++........... .......+ .....-......
T Consensus 80 ~~~~~~~~~~~~~~~~lg~~y~~ir~~L~~l~~~~~~~f~gF~d~t~--------~ei~~~TG-----L~~~~A~~A~~R 146 (302)
T PRK12702 80 ILDEQWQHRPPYYVCALGLPYPCLRHILQQVRQDSHLDLIGFGDWTA--------SELAAATG-----IPLEEAERAQKR 146 (302)
T ss_pred ccccccccCCCceEEecCCCHHHHHHHHHHHHHHhCCCceehhhCCH--------HHHHHHhC-----cCHHHHHHHHhc
Confidence 11223556666666666553332221111100 00000000 000000001112
Q ss_pred cCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCee--EE------------------EEcCcccHHHHHHHHHhc-C---
Q 041225 432 IASLALIIDGNSLVYILEKDLESDLFDLATSCRVV--LC------------------CRVAPLQKAGIVDLIKSR-T--- 487 (658)
Q Consensus 432 ~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~--i~------------------~~~~~~~K~~~v~~L~~~-~--- 487 (658)
.+.-.++..+..... .+.+......++..++.. +. ..+.+.+|+.+++.|++. .
T Consensus 147 e~SEp~~w~~~~~~~--~~~~~~~g~~~~~GgRf~H~l~~~~~~~~~~~~~~~~~~~~~~~~~dKg~A~~~L~~~y~~~~ 224 (302)
T PRK12702 147 EYSEIFSYSGDPARL--REAFAQQEANLTQHLLRLHQLHFSDLPQWYLTGWMQPTLAAEPNSLPGEQAVQLLLDCYQRHL 224 (302)
T ss_pred cCCcceEecCCHHHH--HHHHHHcCCeEEecCceEEecccccccccccccccccccccccCCCCHHHHHHHHHHHHHhcc
Confidence 222233333433222 333444344444333221 11 223377999999999987 2
Q ss_pred -CCeEEEEcCCcCChhhhhhcceeEEecCccc
Q 041225 488 -DDMTLAIGDGANDVSMIQMADVGVGICGQEG 518 (658)
Q Consensus 488 -~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~ 518 (658)
.-.++++|||.||++||++||++|.+.+...
T Consensus 225 ~~~~tiaLGDspND~~mLe~~D~~vvi~~~~~ 256 (302)
T PRK12702 225 GPIKALGIGCSPPDLAFLRWSEQKVVLPSPIA 256 (302)
T ss_pred CCceEEEecCChhhHHHHHhCCeeEEecCCCC
Confidence 3389999999999999999999999955443
|
|
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=2.2e-14 Score=142.93 Aligned_cols=198 Identities=10% Similarity=0.080 Sum_probs=121.6
Q ss_pred HHHhhhccceeeeccc--cccccCCChHHHHHHHHh-cCCeEEEEecCChhHHHHHHHHcCc--cCCCccEEE-------
Q 041225 299 TAALIECDLTLLGATG--IEDKLQDGVPEAIEALRQ-AGIKVWVLTGDKQDTAISIALSCKL--LTPDMQQII------- 366 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~--~~d~l~~~~~~aI~~l~~-~GI~v~i~TGr~~~~a~~ia~~~gl--~~~~~~~i~------- 366 (658)
.++++|+||||+.... -...++++++++|++|++ .|++++++|||+...+..+...+++ +..++..+.
T Consensus 15 ~li~~D~DGTLl~~~~~p~~~~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~ 94 (266)
T PRK10187 15 YAWFFDLDGTLAEIKPHPDQVVVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTH 94 (266)
T ss_pred EEEEEecCCCCCCCCCCcccccCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCee
Confidence 4567999999998411 023688999999999998 7999999999999999888766552 222332222
Q ss_pred EcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEE---e-Cc
Q 041225 367 INGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALII---D-GN 442 (658)
Q Consensus 367 ~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~-~~ 442 (658)
....+.+.+..+.+.+.+...-......+.. ...+.+.. + ..
T Consensus 95 ~~~l~~~~~~~i~~~l~~~~~~~pg~~ve~k----------------------------------~~~~~~h~r~~~~~~ 140 (266)
T PRK10187 95 IVHLPDAIARDISVQLHTALAQLPGAELEAK----------------------------------GMAFALHYRQAPQHE 140 (266)
T ss_pred eccCChhHHHHHHHHHHHHhccCCCcEEEeC----------------------------------CcEEEEECCCCCccH
Confidence 1222344444444444332100000000000 00000000 0 11
Q ss_pred cHHHHHHHhhHHhhh-hhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhc----ceeEEec
Q 041225 443 SLVYILEKDLESDLF-DLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMA----DVGVGIC 514 (658)
Q Consensus 443 ~~~~~~~~~~~~~~~-~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A----~vgIam~ 514 (658)
+....+...+...+. ..+.+++.++++++.+.+|+.+++.+.++ ..+.+++|||+.||.+||+.+ ++||+|
T Consensus 141 ~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~~GD~~nD~~mf~~~~~~~g~~vav- 219 (266)
T PRK10187 141 DALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVFVGDDLTDEAGFAVVNRLGGISVKV- 219 (266)
T ss_pred HHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEEEcCCccHHHHHHHHHhcCCeEEEE-
Confidence 111112222222221 23446788999999999999999999988 357899999999999999999 999999
Q ss_pred Cccchhhhhhcccccccccch
Q 041225 515 GQEGRQAVMASDFAMGQFRFL 535 (658)
Q Consensus 515 ~~~~~~~k~~AD~vl~~~~~l 535 (658)
|++. ..|++.+.+-.-.
T Consensus 220 g~a~----~~A~~~l~~~~~v 236 (266)
T PRK10187 220 GTGA----TQASWRLAGVPDV 236 (266)
T ss_pred CCCC----CcCeEeCCCHHHH
Confidence 5543 3577777765533
|
|
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=99.57 E-value=2.5e-14 Score=140.88 Aligned_cols=198 Identities=14% Similarity=0.127 Sum_probs=116.1
Q ss_pred HhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHc------CccCCCcc-------EEEE
Q 041225 301 ALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSC------KLLTPDMQ-------QIII 367 (658)
Q Consensus 301 ~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~------gl~~~~~~-------~i~~ 367 (658)
.++|+||||+.. ++++++++.++|++|+++ ++|+++|||.+.......... .++..++. .++.
T Consensus 10 ~~~D~DGTLl~~---~~~i~~~~~~ai~~l~~~-i~fviaTGR~~~~~~~~~~~~~~~~~~~~I~~NGa~i~~~g~~i~~ 85 (245)
T PLN02423 10 ALFDVDGTLTAP---RKEATPEMLEFMKELRKV-VTVGVVGGSDLSKISEQLGKTVINDYDYVFSENGLVAHKDGKLIGT 85 (245)
T ss_pred EEEeccCCCcCC---CCcCCHHHHHHHHHHHhC-CEEEEECCcCHHHHHHHhcccccccCCEEEECCceEEEeCCEEEEE
Confidence 348999999987 568999999999999987 999999999888775433322 23343333 3333
Q ss_pred ----cCCCHHHHHHHHHHHHHhc-CcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCc
Q 041225 368 ----NGNSEEECKDLLADAKARY-GVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGN 442 (658)
Q Consensus 368 ----~g~~~~~~~~ii~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 442 (658)
...+.+.++++++..+... ..... .....+...... .................+..++..+ ..
T Consensus 86 ~~l~~~l~~~~~~~ii~~~~~~~~~~~i~--~~~~~~ie~~~~--------i~~~~~~~~~~~~~~~~~~~~i~~i--~~ 153 (245)
T PLN02423 86 QSLKSFLGEDKLKEFINFTLHYIADLDIP--IKRGTFIEFRSG--------MLNVSPIGRNCSQEERDEFEKYDKV--HN 153 (245)
T ss_pred ecccccCCHHHHHHHHHHHHHHHHHcCCc--cccCCeEEccCC--------ccccCcccccCCHhHHhhHHhhCcc--ch
Confidence 2235588899998876531 11111 110111110000 0000000011100111111111111 11
Q ss_pred cHHHHHHHhhHHhhh--hh--hccCCeeEEEEcCcccHHHHHHHHHhcCCCeEEEEcC----CcCChhhhhh-cceeEEe
Q 041225 443 SLVYILEKDLESDLF--DL--ATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGD----GANDVSMIQM-ADVGVGI 513 (658)
Q Consensus 443 ~~~~~~~~~~~~~~~--~i--~~s~~~~i~~~~~~~~K~~~v~~L~~~~~~~v~aiGD----g~NDi~Ml~~-A~vgIam 513 (658)
.. ......+...+. .+ ..++..++++.+.+++|+.+++.|+ +.++|+|||| |.||++||+. .-.|+++
T Consensus 154 ~~-~~~~~~l~~~~~~~~~~~s~~g~~~iDi~~~gvnKg~al~~L~--~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~ 230 (245)
T PLN02423 154 IR-PKMVSVLREKFAHLNLTYSIGGQISFDVFPQGWDKTYCLQFLE--DFDEIHFFGDKTYEGGNDHEIFESERTIGHTV 230 (245)
T ss_pred HH-HHHHHHHHHhCCCCcEEEecCCcEEEEEeeCCCCHHHHHHHhc--CcCeEEEEeccCCCCCCcHHHHhCCCcceEEe
Confidence 11 222233333332 23 3334479999999999999999999 5799999999 8999999997 6678888
Q ss_pred cCcc
Q 041225 514 CGQE 517 (658)
Q Consensus 514 ~~~~ 517 (658)
.+-+
T Consensus 231 ~~~~ 234 (245)
T PLN02423 231 TSPD 234 (245)
T ss_pred CCHH
Confidence 5543
|
|
| >PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Probab=99.56 E-value=4.4e-15 Score=121.36 Aligned_cols=90 Identities=29% Similarity=0.343 Sum_probs=68.8
Q ss_pred hhccceeecCCCCCCCCCCCCcccCCcceeeecCChhHHHHHHHHHHcCcEEEEEcCCeEEEEeCCcEEEEEEEEeeCCC
Q 041225 123 AACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYTLFERTSGHIVIDINGEGLRLDVLGLHEFD 202 (658)
Q Consensus 123 ~lC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~~~~~~~g~~~~~~il~~~~F~ 202 (658)
+|||++........ ...+. .++|+|.||++|+..+|..+. ..+....+++++.+||+
T Consensus 1 ~LCn~a~~~~~~~~------------~~~~~-~G~ptE~ALl~~~~~~g~~~~----------~~~~~~~~~~~~~~pF~ 57 (91)
T PF13246_consen 1 ALCNDAEIEYDDES------------KTEEI-IGDPTEKALLRFAKKLGVGID----------IKEIRSKYKIVAEIPFD 57 (91)
T ss_pred CCccccEeecCCCC------------ccccc-cCCcCHHHHHHHHHHcCCCCc----------HHHHHhhcceeEEEccC
Confidence 58999877543321 11123 448999999999999975432 23345678999999999
Q ss_pred CCCCeeEEEEEcCCCcEEEEEeCCchHhHHhhhc
Q 041225 203 SVRKRMSVVIRFPDNSVKVLVKGADSSMFNILAK 236 (658)
Q Consensus 203 s~rk~msviv~~~~~~~~l~~KGa~e~i~~~~~~ 236 (658)
|+||||+||++ .++.+.+|+|||||.|+++|+.
T Consensus 58 S~rK~msvv~~-~~~~~~~~~KGA~e~il~~Ct~ 90 (91)
T PF13246_consen 58 SERKRMSVVVR-NDGKYILYVKGAPEVILDRCTH 90 (91)
T ss_pred cccceeEEEEe-CCCEEEEEcCCChHHHHHhcCC
Confidence 99999999999 3345778999999999999985
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=99.51 E-value=6.3e-14 Score=135.01 Aligned_cols=184 Identities=22% Similarity=0.281 Sum_probs=110.1
Q ss_pred HhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcC--ccCCCccEEEEcCC-----CHH
Q 041225 301 ALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCK--LLTPDMQQIIINGN-----SEE 373 (658)
Q Consensus 301 ~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~g--l~~~~~~~i~~~g~-----~~~ 373 (658)
+++|+||||+..- ..++++++.++|++|+++|++++++|||+...+..+...++ ++..++..+...+. +.+
T Consensus 2 i~~D~DgTL~~~~--~~~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~~~ 79 (204)
T TIGR01484 2 LFFDLDGTLLDPN--AHELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLPLPLIAENGALIFYPGEILYIEPSD 79 (204)
T ss_pred EEEeCcCCCcCCC--CCcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCCCCEEECCCcEEEECCEEEEEcccc
Confidence 4689999999852 14799999999999999999999999999999999887633 33344444433221 112
Q ss_pred HHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCc----cHHHHHH
Q 041225 374 ECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGN----SLVYILE 449 (658)
Q Consensus 374 ~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~~~ 449 (658)
..+.++..... ...... ... ........ + .+.....+...+. .....+.
T Consensus 80 ~~~~~~~~~~~-~~~~~~--~~~----------------------~~~~~~~~-e-~~~~~~~~~~~~~~~~~~~~~~~~ 132 (204)
T TIGR01484 80 VFEEILGIKEE-IGAELK--SLS----------------------EHYVGTFI-E-DKAIAVAIHYVGAELGQELDSKMR 132 (204)
T ss_pred cHHHHHHhhhh-cCceee--eec----------------------ccccccee-e-cccceeeEEEeccchhhHHHHHHH
Confidence 22333322211 000000 000 00000000 0 0111112211111 1111111
Q ss_pred HhhHH-----hhhhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEe
Q 041225 450 KDLES-----DLFDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGI 513 (658)
Q Consensus 450 ~~~~~-----~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam 513 (658)
..+.. ....+..+++..+++.+.+.+|+.+++.++++ +.+.+++|||+.||++|++.+++||||
T Consensus 133 ~~~~~~~~~~~~~~~~~s~~~~~ev~p~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~~~~~vam 204 (204)
T TIGR01484 133 ERLEKIGRNDLELEAIYVGKTDLEVLPAGVDKGSALQALLKELNGKRDEILAFGDSGNDEEMFEVAGLAVAV 204 (204)
T ss_pred HHHHhhccccCcEEEEEecCCEEEEecCCCChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCCceEC
Confidence 11111 11223335778899999999999999999987 457799999999999999999999997
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.42 E-value=9.5e-13 Score=108.95 Aligned_cols=116 Identities=22% Similarity=0.389 Sum_probs=97.6
Q ss_pred ccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCcccc
Q 041225 316 EDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTK 395 (658)
Q Consensus 316 ~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~ 395 (658)
-.++-+++.++|++|++. +++.++|||...+....|+-.|+-.
T Consensus 28 gGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~------------------------------------ 70 (152)
T COG4087 28 GGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPV------------------------------------ 70 (152)
T ss_pred CcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCce------------------------------------
Confidence 458999999999999999 9999999999999999999888622
Q ss_pred ccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCccc
Q 041225 396 CNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQ 475 (658)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~ 475 (658)
..+++...+..
T Consensus 71 ---------------------------------------------------------------------~rv~a~a~~e~ 81 (152)
T COG4087 71 ---------------------------------------------------------------------ERVFAGADPEM 81 (152)
T ss_pred ---------------------------------------------------------------------eeeecccCHHH
Confidence 34677788889
Q ss_pred HHHHHHHHHhcCCCeEEEEcCCcCChhhhhhcceeEEecCc--cchhhhhhcccccccccchHHH
Q 041225 476 KAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQ--EGRQAVMASDFAMGQFRFLKRL 538 (658)
Q Consensus 476 K~~~v~~L~~~~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~--~~~~~k~~AD~vl~~~~~l~~l 538 (658)
|..+++.|++. .+.|+|+|||.||++||+.||+||..-++ ....+..+||+++.+-.-...+
T Consensus 82 K~~ii~eLkk~-~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~i~e~ldl 145 (152)
T COG4087 82 KAKIIRELKKR-YEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKEIAEILDL 145 (152)
T ss_pred HHHHHHHhcCC-CcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhhHHHHHHH
Confidence 99999999985 78999999999999999999999966343 3445668999998876554444
|
|
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=2.9e-11 Score=137.99 Aligned_cols=194 Identities=20% Similarity=0.135 Sum_probs=116.6
Q ss_pred HHHhhhccceeeecccc--ccccCCChHHHHHHHHh-cCCeEEEEecCChhHHHHHHHHcC--ccCCCccEEEEcCC---
Q 041225 299 TAALIECDLTLLGATGI--EDKLQDGVPEAIEALRQ-AGIKVWVLTGDKQDTAISIALSCK--LLTPDMQQIIINGN--- 370 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~--~d~l~~~~~~aI~~l~~-~GI~v~i~TGr~~~~a~~ia~~~g--l~~~~~~~i~~~g~--- 370 (658)
.++++|.||||+..... ...+++++.++|++|.+ .|+.|+++|||+...+.......+ ++..+|..+...+.
T Consensus 493 rLi~~D~DGTL~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~~l~liaenG~~i~~~~~~w~ 572 (726)
T PRK14501 493 RLLLLDYDGTLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDLPIHLVAEHGAWSRAPGGEWQ 572 (726)
T ss_pred eEEEEecCccccCCCCCcccCCCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCCCeEEEEeCCEEEeCCCCceE
Confidence 46789999999984210 12477899999999999 599999999999999887765444 33334433332111
Q ss_pred -----C---HHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeC-
Q 041225 371 -----S---EEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDG- 441 (658)
Q Consensus 371 -----~---~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~- 441 (658)
+ .+.+..+++.+..... + .... .+..........
T Consensus 573 ~~~~~~~~w~~~v~~il~~~~~~~~--------------------------g---s~ie--------~k~~~l~~~~r~~ 615 (726)
T PRK14501 573 LLEPVATEWKDAVRPILEEFVDRTP--------------------------G---SFIE--------EKEASLAWHYRNA 615 (726)
T ss_pred ECCCcchhHHHHHHHHHHHHHhcCC--------------------------C---cEEE--------EcceEEEEEccCC
Confidence 0 1122222222211100 0 0000 000111111111
Q ss_pred -ccHHHH----HHHhhHHh---hhhhhccCCeeEEEEcCcccHHHHHHHHHhc-CCCeEEEEcCCcCChhhhhhc---ce
Q 041225 442 -NSLVYI----LEKDLESD---LFDLATSCRVVLCCRVAPLQKAGIVDLIKSR-TDDMTLAIGDGANDVSMIQMA---DV 509 (658)
Q Consensus 442 -~~~~~~----~~~~~~~~---~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~-~~~~v~aiGDg~NDi~Ml~~A---~v 509 (658)
.+.... +...+... ....+..++.++++++.+.+||.+++.+.+. +.+.+++|||+.||.+||+.+ ++
T Consensus 616 d~~~~~~~a~~l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~ 695 (726)
T PRK14501 616 DPELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLEAGPYDFVLAIGDDTTDEDMFRALPETAI 695 (726)
T ss_pred CHHHHHHHHHHHHHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHhcCCCCEEEEECCCCChHHHHHhcccCce
Confidence 111111 11111111 1112334678899999999999999999987 668999999999999999986 68
Q ss_pred eEEecCccchhhhhhcccccccccc
Q 041225 510 GVGICGQEGRQAVMASDFAMGQFRF 534 (658)
Q Consensus 510 gIam~~~~~~~~k~~AD~vl~~~~~ 534 (658)
+|+| |+. +.+|++.+.+.+-
T Consensus 696 ~v~v-G~~----~s~A~~~l~~~~e 715 (726)
T PRK14501 696 TVKV-GPG----ESRARYRLPSQRE 715 (726)
T ss_pred EEEE-CCC----CCcceEeCCCHHH
Confidence 8888 443 4678898887643
|
|
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=99.26 E-value=9.5e-12 Score=113.34 Aligned_cols=121 Identities=16% Similarity=0.170 Sum_probs=90.0
Q ss_pred HHhhhccceeeec---cccccc------cCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCC
Q 041225 300 AALIECDLTLLGA---TGIEDK------LQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGN 370 (658)
Q Consensus 300 ~~~~d~DgTllg~---~~~~d~------l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~ 370 (658)
++++|+||||+.- ..-+++ +++. .+|++|+++|+++.|+||++...+..+++.+|+...
T Consensus 3 ~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~~~~--~~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~---------- 70 (154)
T TIGR01670 3 LLILDVDGVLTDGKIYYTNNGEEIKAFNVRDG--YGIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHL---------- 70 (154)
T ss_pred EEEEeCceeEEcCeEEECCCCcEEEEEechhH--HHHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEE----------
Confidence 3578999999972 111110 2222 389999999999999999999999999988886210
Q ss_pred CHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHH
Q 041225 371 SEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEK 450 (658)
Q Consensus 371 ~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 450 (658)
T Consensus 71 -------------------------------------------------------------------------------- 70 (154)
T TIGR01670 71 -------------------------------------------------------------------------------- 70 (154)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhccc
Q 041225 451 DLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDF 527 (658)
Q Consensus 451 ~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~ 527 (658)
+.. ...|...++.++++ +++.++++||+.||++|++.|+++++|. ++.+.++..|++
T Consensus 71 ----------------~~~---~~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~-~~~~~~~~~a~~ 130 (154)
T TIGR01670 71 ----------------YQG---QSNKLIAFSDILEKLALAPENVAYIGDDLIDWPVMEKVGLSVAVA-DAHPLLIPRADY 130 (154)
T ss_pred ----------------Eec---ccchHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEecC-CcCHHHHHhCCE
Confidence 000 13466677777655 5678999999999999999999999994 444468888999
Q ss_pred ccccc
Q 041225 528 AMGQF 532 (658)
Q Consensus 528 vl~~~ 532 (658)
++.+.
T Consensus 131 i~~~~ 135 (154)
T TIGR01670 131 VTRIA 135 (154)
T ss_pred EecCC
Confidence 88644
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=99.25 E-value=7.9e-12 Score=123.19 Aligned_cols=190 Identities=18% Similarity=0.203 Sum_probs=105.9
Q ss_pred Hhhhccceee-eccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCC------CccEEEE--cCCC
Q 041225 301 ALIECDLTLL-GATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTP------DMQQIII--NGNS 371 (658)
Q Consensus 301 ~~~d~DgTll-g~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~------~~~~i~~--~g~~ 371 (658)
++.|.|+||+ |. ..-.....+.++...+.++.++++|||+...+..+..+.++..| .+..|+. +..+
T Consensus 5 l~sDlD~Tl~~~~----~~~~~~l~~~l~~~~~~~~~~v~~TGRs~~~~~~~~~~~~l~~Pd~~I~svGt~I~~~~~~~~ 80 (247)
T PF05116_consen 5 LASDLDGTLIDGD----DEALARLEELLEQQARPEILFVYVTGRSLESVLRLLREYNLPQPDYIITSVGTEIYYGENWQP 80 (247)
T ss_dssp EEEETBTTTBHCH----HHHHHHHHHHHHHHHCCGEEEEEE-SS-HHHHHHHHHHCT-EE-SEEEETTTTEEEESSTTEE
T ss_pred EEEECCCCCcCCC----HHHHHHHHHHHHHhhCCCceEEEECCCCHHHHHHHHHhCCCCCCCEEEecCCeEEEEcCCCcC
Confidence 4679999999 43 22223334444445578899999999999999999999988654 2333333 1212
Q ss_pred HHHHHHHHHHHHHhcCcccCccccccccccchhHHHH-HHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHH---H
Q 041225 372 EEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEY-LAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVY---I 447 (658)
Q Consensus 372 ~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~---~ 447 (658)
.....+.+..--. ...... ...... .. ......+...+..+.+....... .
T Consensus 81 d~~w~~~i~~~w~------------------~~~v~~~l~~~~~--l~-----~q~~~~q~~~k~sy~~~~~~~~~~~~~ 135 (247)
T PF05116_consen 81 DEEWQAHIDERWD------------------RERVEEILAELPG--LR-----PQPESEQRPFKISYYVDPDDSADILEE 135 (247)
T ss_dssp -HHHHHHHHTT--------------------HHHHHHHHHCHCC--EE-----EGGCCCGCCTCECEEEETTSHCHHHHH
T ss_pred hHHHHHHHHhcCC------------------hHHHHHHHHHhhC--cc-----cCCccccCCeeEEEEEecccchhHHHH
Confidence 2222221111000 000000 000000 00 00001112234455555544333 3
Q ss_pred HHHhhHHhhh--hhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccchh
Q 041225 448 LEKDLESDLF--DLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQ 520 (658)
Q Consensus 448 ~~~~~~~~~~--~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~ 520 (658)
++..+..... .++.+....+++.+.+.+|+.+|+.|+++ +.+.|+++|||.||++||..+..||.+ +|+..+
T Consensus 136 i~~~l~~~~l~~~~i~s~~~~ldilP~~a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV-~Na~~e 212 (247)
T PF05116_consen 136 IRARLRQRGLRVNVIYSNGRDLDILPKGASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVV-GNAQPE 212 (247)
T ss_dssp HHHHHHCCTCEEEEEECTCCEEEEEETT-SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE--TTS-HH
T ss_pred HHHHHHHcCCCeeEEEccceeEEEccCCCCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEE-cCCCHH
Confidence 3333333222 34556677899999999999999999998 567899999999999999999999999 555544
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.24 E-value=1.8e-11 Score=115.01 Aligned_cols=122 Identities=14% Similarity=0.131 Sum_probs=92.9
Q ss_pred HHHhhhccceeeecc----ccccccCCChH---HHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCC
Q 041225 299 TAALIECDLTLLGAT----GIEDKLQDGVP---EAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNS 371 (658)
Q Consensus 299 ~~~~~d~DgTllg~~----~~~d~l~~~~~---~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~ 371 (658)
.++++|.||||++.. .-...+++... .+|+.|+++|+++.++||++...+..+++.+|+...
T Consensus 22 kli~~D~Dgtl~~~~i~~~~~~~~~~~~~~~d~~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~----------- 90 (183)
T PRK09484 22 RLLICDVDGVFSDGLIYMGNNGEELKAFNVRDGYGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITHL----------- 90 (183)
T ss_pred eEEEEcCCeeeecCEEEEcCCCCEEEEEeccchHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCcee-----------
Confidence 456789999999641 00123333333 799999999999999999999999999999886311
Q ss_pred HHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHh
Q 041225 372 EEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKD 451 (658)
Q Consensus 372 ~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 451 (658)
T Consensus 91 -------------------------------------------------------------------------------- 90 (183)
T PRK09484 91 -------------------------------------------------------------------------------- 90 (183)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhcccc
Q 041225 452 LESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFA 528 (658)
Q Consensus 452 ~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~v 528 (658)
+. ....|...++.+++. .++++++|||+.||++|++.||+++++ +++...++..||++
T Consensus 91 ----------------f~--g~~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v-~~~~~~~~~~a~~v 151 (183)
T PRK09484 91 ----------------YQ--GQSNKLIAFSDLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAV-ADAHPLLLPRADYV 151 (183)
T ss_pred ----------------ec--CCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEec-CChhHHHHHhCCEE
Confidence 00 123567777777665 467899999999999999999999998 55555678889999
Q ss_pred cc
Q 041225 529 MG 530 (658)
Q Consensus 529 l~ 530 (658)
+.
T Consensus 152 ~~ 153 (183)
T PRK09484 152 TR 153 (183)
T ss_pred ec
Confidence 85
|
|
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=99.13 E-value=5.4e-10 Score=110.44 Aligned_cols=75 Identities=13% Similarity=0.096 Sum_probs=60.3
Q ss_pred hccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhc--------ceeEEecCccchhhhhhcccc
Q 041225 460 ATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMA--------DVGVGICGQEGRQAVMASDFA 528 (658)
Q Consensus 460 ~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A--------~vgIam~~~~~~~~k~~AD~v 528 (658)
+..++.++++++.+.+|+.+++.+.+. ....++++||+.||.+||+.+ ++||+|. .+ ..+..|+++
T Consensus 152 v~~g~~~~e~~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~-~g--~~~~~A~~~ 228 (244)
T TIGR00685 152 VMDGKAVVELKPRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIG-SG--SKKTVAKFH 228 (244)
T ss_pred EEECCeEEEEeeCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEe-cC--CcCCCceEe
Confidence 345677899999999999999999987 346899999999999999999 5788883 22 256779999
Q ss_pred cccccchHH
Q 041225 529 MGQFRFLKR 537 (658)
Q Consensus 529 l~~~~~l~~ 537 (658)
+.+..-+..
T Consensus 229 ~~~~~~v~~ 237 (244)
T TIGR00685 229 LTGPQQVLE 237 (244)
T ss_pred CCCHHHHHH
Confidence 887765433
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=99.11 E-value=2.3e-10 Score=104.94 Aligned_cols=123 Identities=18% Similarity=0.213 Sum_probs=91.7
Q ss_pred HHHhhhccceeeec------cccc-cccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCC
Q 041225 299 TAALIECDLTLLGA------TGIE-DKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNS 371 (658)
Q Consensus 299 ~~~~~d~DgTllg~------~~~~-d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~ 371 (658)
++..+|.||+|.+- .|-+ ...+..--.+|+.|+++|+++.|+|+.+...+....+.+|+...
T Consensus 8 ~~~v~d~dGv~tdg~~~~~~~g~~~~~~~~~D~~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~~----------- 76 (169)
T TIGR02726 8 KLVILDVDGVMTDGRIVINDEGIESRNFDIKDGMGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKRF----------- 76 (169)
T ss_pred eEEEEeCceeeECCeEEEcCCCcEEEEEecchHHHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcEE-----------
Confidence 34568888888654 2211 12445667899999999999999999999999999999987321
Q ss_pred HHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHh
Q 041225 372 EEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKD 451 (658)
Q Consensus 372 ~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 451 (658)
T Consensus 77 -------------------------------------------------------------------------------- 76 (169)
T TIGR02726 77 -------------------------------------------------------------------------------- 76 (169)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhcccc
Q 041225 452 LESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFA 528 (658)
Q Consensus 452 ~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~v 528 (658)
+... ..|-..++.+.++ .++++++|||+.||++|++.|++++|| +|+.+.++..|++|
T Consensus 77 ----------------f~~~--kpkp~~~~~~~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am-~nA~~~lk~~A~~I 137 (169)
T TIGR02726 77 ----------------HEGI--KKKTEPYAQMLEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAV-GDAVADVKEAAAYV 137 (169)
T ss_pred ----------------EecC--CCCHHHHHHHHHHcCcCHHHEEEECCCHHHHHHHHHCCCeEEC-cCchHHHHHhCCEE
Confidence 0000 1333455555544 457899999999999999999999999 66666799999998
Q ss_pred ccc
Q 041225 529 MGQ 531 (658)
Q Consensus 529 l~~ 531 (658)
+..
T Consensus 138 ~~~ 140 (169)
T TIGR02726 138 TTA 140 (169)
T ss_pred cCC
Confidence 754
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=99.08 E-value=2.7e-09 Score=109.51 Aligned_cols=249 Identities=15% Similarity=0.134 Sum_probs=127.2
Q ss_pred HHHHHHHHHHHHHHhhhhhhHHH--HHHHHHHhhhccceeeecccccc--ccCCChHHHHHHHHhcCCeEEEEecCChhH
Q 041225 272 DEELKQWQHRYEDASTSLVDRAS--KLRQTAALIECDLTLLGATGIED--KLQDGVPEAIEALRQAGIKVWVLTGDKQDT 347 (658)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~DgTllg~~~~~d--~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~ 347 (658)
+.++..|..++..+...++.-.. +-.+.++++|.||||.....--+ .+.++.++++++|.+.. .++|+|||+...
T Consensus 91 ~~~~~~~~~~~p~al~~~~~~~~~~~~k~~~LfLDyDGTLaPIv~~Pd~A~~s~~~~~aL~~La~~~-~VAIVSGR~~~~ 169 (384)
T PLN02580 91 DFAYRTWMLKYPSALTSFEQIANFAKGKKIALFLDYDGTLSPIVDDPDRALMSDAMRSAVKNVAKYF-PTAIISGRSRDK 169 (384)
T ss_pred hHHHHHHHHhCcHHHHHHHHHHHHhhcCCeEEEEecCCccCCCCCCcccccCCHHHHHHHHHHhhCC-CEEEEeCCCHHH
Confidence 45677888887777665543222 22345678999999987632111 25789999999999885 899999999999
Q ss_pred HHHHHHHcCccCCCccEEEEcCCCHHHHHH-HH-HHHHHhcCcccCcccccccc-ccc--------hhHHHHHHhhcCCC
Q 041225 348 AISIALSCKLLTPDMQQIIINGNSEEECKD-LL-ADAKARYGVKSSNRTKCNSK-LKR--------SAEIEYLAISNDAK 416 (658)
Q Consensus 348 a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~-ii-~~~~~~~~~~~~~~~~~~~~-~~~--------~~~~~~~~~~~~~~ 416 (658)
+.....-.++ .+...+|.+...... .. .... ..+........... ... ..-...+.......
T Consensus 170 L~~~l~~~~l-----~laGsHG~e~~~p~~~~~~~~~~--~~~~~~~~~g~~~~~~~~a~~~~~~i~~v~~~l~e~~~~~ 242 (384)
T PLN02580 170 VYELVGLTEL-----YYAGSHGMDIMGPVRESVSNDHP--NCIKSTDQQGKEVNLFQPASEFLPMIDEVFRSLVESTKDI 242 (384)
T ss_pred HHHHhCCCCc-----cEEEeCCceeecCCCCccccccc--ccccccccccccccccccchhhhhhHHHHHHHHHHHhccC
Confidence 8776543332 123333322100000 00 0000 00000000000000 000 00000000000000
Q ss_pred CCCCCCCCchhhhhccCcEEEEEe--CccHHHHHHHhhHH---hhh-hhhccCCeeEEEEc-CcccHHHHHHHHHhc-C-
Q 041225 417 FSDVPQGHDVKEVAAIASLALIID--GNSLVYILEKDLES---DLF-DLATSCRVVLCCRV-APLQKAGIVDLIKSR-T- 487 (658)
Q Consensus 417 ~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~---~~~-~i~~s~~~~i~~~~-~~~~K~~~v~~L~~~-~- 487 (658)
..... ..+...+++..- .+.........+.. .+. -.+..++.++++++ .+.+||.+|+.|.++ +
T Consensus 243 -----pGs~V--E~K~~svavHYR~a~~~~~~~~~~~l~~~l~~~~~l~v~~Gk~vlEVrP~~g~~KG~Av~~Ll~~~g~ 315 (384)
T PLN02580 243 -----KGAKV--ENHKFCVSVHYRNVDEKNWPLVAQCVHDVLKKYPRLRLTHGRKVLEVRPVIDWNKGKAVEFLLESLGL 315 (384)
T ss_pred -----CCCEE--EecCcEEEEEeCCCCchHHHHHHHHHHHHHHhCCceEEEeCCeEEEEecCCCCCHHHHHHHHHHhcCC
Confidence 00000 001122222221 11111222222221 111 12344567899999 599999999999987 2
Q ss_pred -CC-e--EEEEcCCcCChhhhhh-----cceeEEecCccchhhhhhcccccccccchHHH
Q 041225 488 -DD-M--TLAIGDGANDVSMIQM-----ADVGVGICGQEGRQAVMASDFAMGQFRFLKRL 538 (658)
Q Consensus 488 -~~-~--v~aiGDg~NDi~Ml~~-----A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l 538 (658)
.. . +++|||+.||.+||+. +|+||+| +++. -...|++.+.+-.-...+
T Consensus 316 ~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~V-gn~~--~~t~A~y~L~dp~eV~~~ 372 (384)
T PLN02580 316 SNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILV-SSVP--KESNAFYSLRDPSEVMEF 372 (384)
T ss_pred CcccceeEEEECCCchHHHHHHhhhccCCceEEEE-ecCC--CCccceEEcCCHHHHHHH
Confidence 11 2 4899999999999996 6899999 4433 233678887776554444
|
|
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.05 E-value=9.8e-10 Score=111.80 Aligned_cols=129 Identities=26% Similarity=0.288 Sum_probs=92.0
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCcccccc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCN 397 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~ 397 (658)
++.|++.+.|+.|+++|++++++||.....+..+.+.+|+... +. |..
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~----~a-n~l--------------------------- 228 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAA----VA-NEL--------------------------- 228 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeE----EE-eEE---------------------------
Confidence 6889999999999999999999999988778888888887321 00 000
Q ss_pred ccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHH
Q 041225 398 SKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKA 477 (658)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~ 477 (658)
. +.++.- . ..+..-...+..|.
T Consensus 229 --------------------------------------e-i~dg~l--------------t-----g~v~g~iv~~k~K~ 250 (322)
T PRK11133 229 --------------------------------------E-IMDGKL--------------T-----GNVLGDIVDAQYKA 250 (322)
T ss_pred --------------------------------------E-EECCEE--------------E-----eEecCccCCcccHH
Confidence 0 000000 0 00000012346899
Q ss_pred HHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhcccccccccchHHH
Q 041225 478 GIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRL 538 (658)
Q Consensus 478 ~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l 538 (658)
.+++.++++ +++++++||||.||++|++.||+|||| |+.+.+++.||+++........|
T Consensus 251 ~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~--nAkp~Vk~~Ad~~i~~~~l~~~l 312 (322)
T PRK11133 251 DTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY--HAKPKVNEQAQVTIRHADLMGVL 312 (322)
T ss_pred HHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe--CCCHHHHhhCCEEecCcCHHHHH
Confidence 999999876 568999999999999999999999999 45556999999999754444433
|
|
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=99.03 E-value=1.2e-09 Score=124.51 Aligned_cols=174 Identities=16% Similarity=0.190 Sum_probs=103.8
Q ss_pred HHHhhhccceeeeccccccccCCChHHHHHHH-HhcCCeEEEEecCChhHHHHHHHH---cCccCCCccEEEEcCCC---
Q 041225 299 TAALIECDLTLLGATGIEDKLQDGVPEAIEAL-RQAGIKVWVLTGDKQDTAISIALS---CKLLTPDMQQIIINGNS--- 371 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l-~~~GI~v~i~TGr~~~~a~~ia~~---~gl~~~~~~~i~~~g~~--- 371 (658)
.++++|.||||+........+++++.++|++| ++.|+.|+++|||+..++...... ++++..+|..+...+..
T Consensus 597 rlI~LDyDGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~~~l~laaEHG~~ir~~~~~~w~ 676 (854)
T PLN02205 597 RAILLDYDGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPCEKLGIAAEHGYFLRLKRDVEWE 676 (854)
T ss_pred eEEEEecCCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCCCCeEEEEeCCEEEEeCCCceee
Confidence 56789999999976433346778999999997 788999999999999998877643 45666666555433210
Q ss_pred ------HHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEe-----
Q 041225 372 ------EEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIID----- 440 (658)
Q Consensus 372 ------~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----- 440 (658)
....++.+....+.+.... .+... + .+...++..
T Consensus 677 ~~~~~~~~~w~~~v~~i~~~y~ert----------------------pGs~I----E---------~K~~slv~HyR~ad 721 (854)
T PLN02205 677 TCVPVADCSWKQIAEPVMQLYTETT----------------------DGSTI----E---------DKETALVWCYEDAD 721 (854)
T ss_pred ecchhhhHHHHHHHHHHHHHHhcCC----------------------Cchhh----e---------ecceEEEEehhhCC
Confidence 0011111111111000000 00000 0 001111110
Q ss_pred -------CccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhc------CCCeEEEEcCCcCChhhhhhc
Q 041225 441 -------GNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSR------TDDMTLAIGDGANDVSMIQMA 507 (658)
Q Consensus 441 -------~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~------~~~~v~aiGDg~NDi~Ml~~A 507 (658)
..+....+...+.... ..+.+++.++++++.+.+||.+++.+.+. +.+.+++|||+.||.+||+.+
T Consensus 722 pd~~~~qa~el~~~l~~~l~~~~-~~v~~G~~vvEV~p~gvnKG~Al~~Ll~~~~~~g~~~d~vl~~GDD~nDedMF~~~ 800 (854)
T PLN02205 722 PDFGSCQAKELLDHLESVLANEP-VTVKSGQNIVEVKPQGVSKGLVAKRLLSIMQERGMLPDFVLCIGDDRSDEDMFEVI 800 (854)
T ss_pred hHHhhhhhHHHHHHHHHHHhcCc-eEEEECCcEEEEEeCCCCHHHHHHHHHHHHHhcCCCcccEEEEcCCccHHHHHHHh
Confidence 0111111111111111 23556778999999999999999999742 456899999999999999988
Q ss_pred c
Q 041225 508 D 508 (658)
Q Consensus 508 ~ 508 (658)
+
T Consensus 801 ~ 801 (854)
T PLN02205 801 T 801 (854)
T ss_pred h
Confidence 6
|
|
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.01 E-value=2.2e-09 Score=102.72 Aligned_cols=124 Identities=23% Similarity=0.234 Sum_probs=92.9
Q ss_pred cccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCccccc
Q 041225 317 DKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKC 396 (658)
Q Consensus 317 d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~ 396 (658)
.++.|++.+.++.++++|.+++++||-...-+.++++.+|+...-...+...
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~---------------------------- 127 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEID---------------------------- 127 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEe----------------------------
Confidence 3799999999999999999999999999999999999999854311111000
Q ss_pred cccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccH
Q 041225 397 NSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQK 476 (658)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K 476 (658)
+| ...+.++...+.+..|
T Consensus 128 -------------------------------------------dG-------------------~ltG~v~g~~~~~~~K 145 (212)
T COG0560 128 -------------------------------------------DG-------------------KLTGRVVGPICDGEGK 145 (212)
T ss_pred -------------------------------------------CC-------------------EEeceeeeeecCcchH
Confidence 00 0012344566677899
Q ss_pred HHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhcccccccc
Q 041225 477 AGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQF 532 (658)
Q Consensus 477 ~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~ 532 (658)
...++.+.+. +.+.++|+|||.||+|||+.||.+|++.... .+...|+......
T Consensus 146 ~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n~~~--~l~~~a~~~~~~~ 202 (212)
T COG0560 146 AKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVNPKP--KLRALADVRIWPI 202 (212)
T ss_pred HHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeCcCH--HHHHHHHHhcChh
Confidence 9999888775 5568999999999999999999999994333 3666777655444
|
|
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.95 E-value=7.6e-09 Score=94.20 Aligned_cols=198 Identities=14% Similarity=0.166 Sum_probs=113.7
Q ss_pred HHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc-----CCCccEEEEcC----
Q 041225 299 TAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL-----TPDMQQIIING---- 369 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~-----~~~~~~i~~~g---- 369 (658)
..+|.|+|+||++..+ -...+...+.+|+++|+.|++||..+.......-+.+|+- ..++..|+...
T Consensus 8 ~lIFtDlD~TLl~~~y----e~~pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~~~p~iaEnG~aI~~p~~~~~ 83 (274)
T COG3769 8 LLIFTDLDGTLLPHSY----EWQPAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQGLPLIAENGAAIYLPKGWFP 83 (274)
T ss_pred eEEEEcccCcccCCCC----CCCccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCCCCceeecCCceEEecccccc
Confidence 4578999999999422 2234568999999999999999999999999988888874 23444444321
Q ss_pred -----------------CCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhcc
Q 041225 370 -----------------NSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAI 432 (658)
Q Consensus 370 -----------------~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (658)
...+.+++.++.+.+.++......... .+..... +.+... .......+.
T Consensus 84 ~~~~~r~~~g~~~~elg~~l~~ire~l~kLee~~g~~~~~~~d~-------~ei~e~T---Glpre~----aaLa~~rEy 149 (274)
T COG3769 84 FDGKPREISGISHIELGKVLEKIREKLDKLEEHFGFTTFDDVDD-------EEIAEWT---GLPREQ----AALAMLREY 149 (274)
T ss_pred cCCCCceecceEeeehhhhHHHHHHHHHHHHHHhCeeEeccCCH-------HHHHHHh---CCChHH----hHHHHHHHh
Confidence 144566666666666655543322111 0000000 000000 000000001
Q ss_pred CcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhc----CCC-eEEEEcCCcCChhhhhhc
Q 041225 433 ASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSR----TDD-MTLAIGDGANDVSMIQMA 507 (658)
Q Consensus 433 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~----~~~-~v~aiGDg~NDi~Ml~~A 507 (658)
....+--+.++...++...+....+.++...+.+. +......|+.+.+.+.+. +.. .+++.|||.||+|||...
T Consensus 150 seti~~rs~d~~~~~~~~~L~e~glt~v~garf~~-v~~as~gKg~Aa~~ll~~y~rl~~~r~t~~~GDg~nD~Pl~ev~ 228 (274)
T COG3769 150 SETIIWRSSDERMAQFTARLNERGLTFVHGARFWH-VLDASAGKGQAANWLLETYRRLGGARTTLGLGDGPNDAPLLEVM 228 (274)
T ss_pred hhheeecccchHHHHHHHHHHhcCceEEeccceEE-EeccccCccHHHHHHHHHHHhcCceeEEEecCCCCCcccHHHhh
Confidence 11112223344444455545544444444444332 222334588877777654 333 599999999999999999
Q ss_pred ceeEEecC
Q 041225 508 DVGVGICG 515 (658)
Q Consensus 508 ~vgIam~~ 515 (658)
|..+-+.|
T Consensus 229 d~AfiV~~ 236 (274)
T COG3769 229 DYAFIVKG 236 (274)
T ss_pred hhheeecc
Confidence 99997753
|
|
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=98.91 E-value=4.4e-08 Score=99.66 Aligned_cols=224 Identities=12% Similarity=0.110 Sum_probs=124.7
Q ss_pred HHHHHHHHHHHHHHhhhhhhHHHH--HHHHHHhhhccceeeecccc-cc-ccCCChHHHHHHHHhcCCeEEEEecCChhH
Q 041225 272 DEELKQWQHRYEDASTSLVDRASK--LRQTAALIECDLTLLGATGI-ED-KLQDGVPEAIEALRQAGIKVWVLTGDKQDT 347 (658)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~d~DgTllg~~~~-~d-~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~ 347 (658)
..++..|..++..+...+..-... -...++++|+||||+....- ++ .+.+++.++|++|. +|+.++++|||+...
T Consensus 83 ~~~~~~w~~~~psal~~~~~~~~~~~~k~~llflD~DGTL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~ 161 (366)
T PLN03017 83 QQQLNSWIMQHPSALEMFEQIMEASRGKQIVMFLDYDGTLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCIDK 161 (366)
T ss_pred hhhhhHHHhhCChHHHHHHHHHHHhcCCCeEEEEecCCcCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCHHH
Confidence 344566766655544443322211 12356789999999954331 22 58899999999999 889999999999999
Q ss_pred HHHHHHHcCccCCCccEEEEcCCCHH--------------------------HHHHHHHHHHHhcCcccCcccccccccc
Q 041225 348 AISIALSCKLLTPDMQQIIINGNSEE--------------------------ECKDLLADAKARYGVKSSNRTKCNSKLK 401 (658)
Q Consensus 348 a~~ia~~~gl~~~~~~~i~~~g~~~~--------------------------~~~~ii~~~~~~~~~~~~~~~~~~~~~~ 401 (658)
+..+. ++ .+..++..+|.... .+.++.+.+...
T Consensus 162 l~~~~---~l--~~l~l~g~hGa~i~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~L~~~---------------- 220 (366)
T PLN03017 162 VYNFV---KL--AELYYAGSHGMDIKGPAKGFSRHKRVKQSLLYQPANDYLPMIDEVYRQLLEK---------------- 220 (366)
T ss_pred HHHhh---cc--cCceEEEcCCcEEecCCCcceeccccccccccccchhhHHHHHHHHHHHHHH----------------
Confidence 88773 22 22334455554200 001111100000
Q ss_pred chhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCc--cHHHHHHHhhHH---hhh-hhhccCCeeEEEEcC-cc
Q 041225 402 RSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGN--SLVYILEKDLES---DLF-DLATSCRVVLCCRVA-PL 474 (658)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~---~~~-~i~~s~~~~i~~~~~-~~ 474 (658)
....+-. ..+ .+....++..-.. .....+...+.. ... ..+..++.++++++. +.
T Consensus 221 ----------~~~~pGa-~VE-------~K~~~vavHyR~ad~~~~~~l~~~~~~vl~~~~~l~v~~GkkVlEvRP~~~~ 282 (366)
T PLN03017 221 ----------TKSTPGA-KVE-------NHKFCASVHFRCVDEKKWSELVLQVRSVLKNFPTLKLTQGRKVFEIRPMIEW 282 (366)
T ss_pred ----------HhcCCCC-EEE-------ecCcEEEEEcCcCCHHHHHHHHHHHHHHHHhCCCcEEeCCCeEEEecCCCCC
Confidence 0000000 000 0111222222111 110111111111 111 134567889999985 89
Q ss_pred cHHHHHHHHHhc-C-----CCeEEEEcCCcCChhhhhhc-----ceeEEecCccchhhhhhcccccccccchHHH
Q 041225 475 QKAGIVDLIKSR-T-----DDMTLAIGDGANDVSMIQMA-----DVGVGICGQEGRQAVMASDFAMGQFRFLKRL 538 (658)
Q Consensus 475 ~K~~~v~~L~~~-~-----~~~v~aiGDg~NDi~Ml~~A-----~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l 538 (658)
+||.+++.|.+. + ...++++||-..|-.||+.. ++||.+ |... -...|++.+.+-.-...+
T Consensus 283 dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~V-G~~~--k~T~A~y~L~dp~eV~~f 354 (366)
T PLN03017 283 DKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILV-SKFP--KDTDASYSLQDPSEVMDF 354 (366)
T ss_pred CHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEE-CCCC--CCCcceEeCCCHHHHHHH
Confidence 999999999986 1 23589999999999999976 466666 4221 135688888776544433
|
|
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=98.75 E-value=6.4e-08 Score=92.19 Aligned_cols=114 Identities=21% Similarity=0.122 Sum_probs=82.4
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCcccccc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCN 397 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~ 397 (658)
++.|++.+.|+.+++.| +++++||-....+.++++.+|+...-..
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an---------------------------------- 112 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCH---------------------------------- 112 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhce----------------------------------
Confidence 68999999999999986 9999999999999999999998321000
Q ss_pred ccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHH
Q 041225 398 SKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKA 477 (658)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~ 477 (658)
.+.+++.. . .. .. ....+..|.
T Consensus 113 --------------------------------------~l~~~~~g---------------~-~t-G~---~~~~~~~K~ 134 (203)
T TIGR02137 113 --------------------------------------KLEIDDSD---------------R-VV-GY---QLRQKDPKR 134 (203)
T ss_pred --------------------------------------eeEEecCC---------------e-eE-Ce---eecCcchHH
Confidence 00000000 0 00 00 013456899
Q ss_pred HHHHHHHhcCCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhccc
Q 041225 478 GIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDF 527 (658)
Q Consensus 478 ~~v~~L~~~~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~ 527 (658)
..++.+++. +..++++|||.||++|++.||+||++...+. ++++||-
T Consensus 135 ~~l~~l~~~-~~~~v~vGDs~nDl~ml~~Ag~~ia~~ak~~--~~~~~~~ 181 (203)
T TIGR02137 135 QSVIAFKSL-YYRVIAAGDSYNDTTMLSEAHAGILFHAPEN--VIREFPQ 181 (203)
T ss_pred HHHHHHHhh-CCCEEEEeCCHHHHHHHHhCCCCEEecCCHH--HHHhCCC
Confidence 999999765 4589999999999999999999999955554 6666664
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=98.75 E-value=6.1e-08 Score=94.42 Aligned_cols=128 Identities=22% Similarity=0.316 Sum_probs=90.2
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCcccccc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCN 397 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~ 397 (658)
++.+++.+.|+.|+++|++++++||.....+..+++.+|+...-...+.
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~------------------------------- 133 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLE------------------------------- 133 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEE-------------------------------
Confidence 5889999999999999999999999999999999998887421000000
Q ss_pred ccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEE-cCcccH
Q 041225 398 SKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCR-VAPLQK 476 (658)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~-~~~~~K 476 (658)
.++.. .. ..+... ..+..|
T Consensus 134 -----------------------------------------~~~~~-------------~~------~~~~~~~~~~~~k 153 (219)
T TIGR00338 134 -----------------------------------------VEDGK-------------LT------GLVEGPIVDASYK 153 (219)
T ss_pred -----------------------------------------EECCE-------------EE------EEecCcccCCccc
Confidence 00000 00 000000 122347
Q ss_pred HHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhcccccccccchHHH
Q 041225 477 AGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRL 538 (658)
Q Consensus 477 ~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l 538 (658)
..+++.+++. +++++++||||.+|++|.+.||+++++.+++ .++.+||+++.+.++...+
T Consensus 154 ~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~~~~--~~~~~a~~~i~~~~~~~~~ 216 (219)
T TIGR00338 154 GKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFNAKP--KLQQKADICINKKDLTDIL 216 (219)
T ss_pred HHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeCCCH--HHHHhchhccCCCCHHHHH
Confidence 7777777665 4568999999999999999999999995543 4788999999888765443
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.69 E-value=3e-08 Score=85.76 Aligned_cols=56 Identities=11% Similarity=0.239 Sum_probs=47.8
Q ss_pred cHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhccccccc
Q 041225 475 QKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQ 531 (658)
Q Consensus 475 ~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~ 531 (658)
+|..+.+.|++. ..++|+.+||-.||+|+|+.+|.++|. .++.+.++..||+|+..
T Consensus 83 dK~~a~~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~-~dAh~~v~~~a~~Vt~~ 141 (170)
T COG1778 83 DKLAAFEELLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAV-ADAHPLLKQRADYVTSK 141 (170)
T ss_pred hHHHHHHHHHHHhCCCHHHhhhhcCccccHHHHHHcCCcccc-cccCHHHHHhhHhhhhc
Confidence 677777777766 678999999999999999999999999 55666789999998753
|
|
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=98.62 E-value=8.2e-07 Score=90.23 Aligned_cols=223 Identities=12% Similarity=0.111 Sum_probs=123.2
Q ss_pred HHHHHHHHHHHHHhhhhhhHHHHH--HHHHHhhhccceeeecccccc--ccCCChHHHHHHHHhcCCeEEEEecCChhHH
Q 041225 273 EELKQWQHRYEDASTSLVDRASKL--RQTAALIECDLTLLGATGIED--KLQDGVPEAIEALRQAGIKVWVLTGDKQDTA 348 (658)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~d~DgTllg~~~~~d--~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a 348 (658)
+++..|..++..+...+..-.... .+.++++|.||||+....--+ .+.++++++|++|. ++..++++|||+...+
T Consensus 71 ~~~~~w~~~~p~a~~~~~~~~~~~~~~~~ll~lDyDGTL~PIv~~P~~A~~~~~~~~aL~~La-~~~~vaIvSGR~~~~l 149 (354)
T PLN02151 71 NKQSCWIKEHPSALNMFEEILHKSEGKQIVMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRKLA-KCFPTAIVSGRCREKV 149 (354)
T ss_pred hhHHHHHHhCChHHHHHHHHHHhhcCCceEEEEecCccCCCCCCCcccccCCHHHHHHHHHHh-cCCCEEEEECCCHHHH
Confidence 456778877766655444322221 235678999999995432112 47889999999999 5679999999999998
Q ss_pred HHHHHHcCccCCCccEEEEcCCCH-------------------------HHHHHHHHHHHHhcCcccCccccccccccch
Q 041225 349 ISIALSCKLLTPDMQQIIINGNSE-------------------------EECKDLLADAKARYGVKSSNRTKCNSKLKRS 403 (658)
Q Consensus 349 ~~ia~~~gl~~~~~~~i~~~g~~~-------------------------~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 403 (658)
.....-.++ .+...+|... ..+.++.+.+.+.
T Consensus 150 ~~~~~~~~l-----~laGsHG~e~~~p~~g~~~~~~~~~~~~~~~~~~~~~i~~v~~~l~~~------------------ 206 (354)
T PLN02151 150 SSFVKLTEL-----YYAGSHGMDIKGPEQGSKYKKENQSLLCQPATEFLPVINEVYKKLVEK------------------ 206 (354)
T ss_pred HHHcCCccc-----eEEEeCCceeecCCCCccccccccccccccchhhHHHHHHHHHHHHHH------------------
Confidence 776542222 1222333210 0001111111100
Q ss_pred hHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccH--HHHHHHhhHH---hhh-hhhccCCeeEEEEcC-cccH
Q 041225 404 AEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSL--VYILEKDLES---DLF-DLATSCRVVLCCRVA-PLQK 476 (658)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~---~~~-~i~~s~~~~i~~~~~-~~~K 476 (658)
....+-. ..+ .+....++..-.... ...+...+.. ... --+..++.++++++. +.+|
T Consensus 207 --------~~~~pG~-~VE-------~K~~slavHYR~a~~~~~~~l~~~l~~v~~~~~~l~v~~GkkVvEvrP~~~~dK 270 (354)
T PLN02151 207 --------TKSIPGA-KVE-------NNKFCASVHFRCVEENKWSDLANQVRSVLKNYPKLMLTQGRKVLEIRPIIKWDK 270 (354)
T ss_pred --------HhcCCCC-EEE-------ecCcEEEEEeCCCChHHHHHHHHHHHHHHhhCCCcEEecCCEEEEEeCCCCCCH
Confidence 0000000 000 011122222211111 1111121111 111 134567889999995 8999
Q ss_pred HHHHHHHHhc-C-----CCeEEEEcCCcCChhhhhhc-----ceeEEecCccchhhhhhcccccccccchHHH
Q 041225 477 AGIVDLIKSR-T-----DDMTLAIGDGANDVSMIQMA-----DVGVGICGQEGRQAVMASDFAMGQFRFLKRL 538 (658)
Q Consensus 477 ~~~v~~L~~~-~-----~~~v~aiGDg~NDi~Ml~~A-----~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l 538 (658)
|.+++.|.+. + ..-++++||-..|-.||+.. |+||-+ +... -...|++.+.+-.-...+
T Consensus 271 G~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~V-g~~~--k~T~A~y~L~dp~eV~~~ 340 (354)
T PLN02151 271 GKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGLGILV-SKYA--KETNASYSLQEPDEVMEF 340 (354)
T ss_pred HHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCccEEe-ccCC--CCCcceEeCCCHHHHHHH
Confidence 9999999976 1 12489999999999999864 566666 3211 123688888777554444
|
|
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=98.61 E-value=1e-07 Score=86.66 Aligned_cols=54 Identities=20% Similarity=0.213 Sum_probs=44.4
Q ss_pred Hhhhccceeeecccc--------ccccCCChHHHHHHHHhcCCeEEEEecCChhHHH---HHHHH
Q 041225 301 ALIECDLTLLGATGI--------EDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAI---SIALS 354 (658)
Q Consensus 301 ~~~d~DgTllg~~~~--------~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~---~ia~~ 354 (658)
+++|+||||+..-.+ ++.+++++.+++++++++|++++++|||+...+. ....+
T Consensus 2 VisDIDGTL~~sd~~~~~~~~~~~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~ 66 (157)
T smart00775 2 VISDIDGTITKSDVLGHVVPIIGKDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQ 66 (157)
T ss_pred EEEecCCCCcccccccccccccccCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHH
Confidence 468999999987311 1688999999999999999999999999998874 44444
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.58 E-value=1.1e-07 Score=85.08 Aligned_cols=130 Identities=18% Similarity=0.290 Sum_probs=88.9
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCcccccc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCN 397 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~ 397 (658)
.++|++++.++.|+++|.++.++||--...+.+++.++||-..+- +.|.
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~---yAN~---------------------------- 136 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNI---YANE---------------------------- 136 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhh---hhhe----------------------------
Confidence 588999999999999999999999999999999999999843210 0000
Q ss_pred ccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHH
Q 041225 398 SKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKA 477 (658)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~ 477 (658)
+.++... .+.. ...-.-...+.-|+
T Consensus 137 ---------------------------------------l~fd~~G-----------k~~g-----fd~~~ptsdsggKa 161 (227)
T KOG1615|consen 137 ---------------------------------------LLFDKDG-----------KYLG-----FDTNEPTSDSGGKA 161 (227)
T ss_pred ---------------------------------------eeeccCC-----------cccc-----cccCCccccCCccH
Confidence 0000000 0000 00112334456899
Q ss_pred HHHHHHHhc-CCCeEEEEcCCcCChhhhhhcceeEEecCccc-hhhhhhccccccccc
Q 041225 478 GIVDLIKSR-TDDMTLAIGDGANDVSMIQMADVGVGICGQEG-RQAVMASDFAMGQFR 533 (658)
Q Consensus 478 ~~v~~L~~~-~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~-~~~k~~AD~vl~~~~ 533 (658)
.+|+.+++. ....++|+|||.||++|+..|+.=++..++-. ..+|..|+.-+.+|.
T Consensus 162 ~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~g~~~r~~vk~nak~~~~~f~ 219 (227)
T KOG1615|consen 162 EVIALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGFGGNVIREGVKANAKWYVTDFY 219 (227)
T ss_pred HHHHHHHhCCChheeEEecCCccccccCCchhhhhccCCceEcHhhHhccHHHHHHHH
Confidence 999999987 56789999999999999999776666644432 235666666655554
|
|
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=98.52 E-value=5.1e-07 Score=86.61 Aligned_cols=118 Identities=24% Similarity=0.330 Sum_probs=81.4
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCcccccc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCN 397 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~ 397 (658)
++.|++.+.|+.|+++|++++++||.....+..+++.+|+...-...+...
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~~~~~~----------------------------- 130 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNELVFD----------------------------- 130 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEEEEEEc-----------------------------
Confidence 588999999999999999999999999999999999988632100000000
Q ss_pred ccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHH
Q 041225 398 SKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKA 477 (658)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~ 477 (658)
... .. . +. ......+..|+
T Consensus 131 -------------------------------------------~~g---------------~~-~-p~-~~~~~~~~~k~ 149 (201)
T TIGR01491 131 -------------------------------------------EKG---------------FI-Q-PD-GIVRVTFDNKG 149 (201)
T ss_pred -------------------------------------------CCC---------------eE-e-cc-eeeEEccccHH
Confidence 000 00 0 00 11223455788
Q ss_pred HHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhcc
Q 041225 478 GIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASD 526 (658)
Q Consensus 478 ~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD 526 (658)
.+++.+++. ++++++++|||.||++|++.||+++++ +..+...+.++|
T Consensus 150 ~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~-~~~~~~~~~a~~ 200 (201)
T TIGR01491 150 EAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISL-GDEGHADYLAKD 200 (201)
T ss_pred HHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEE-CCCccchhhccc
Confidence 888887655 457899999999999999999999999 443333444444
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=98.50 E-value=1.1e-07 Score=84.63 Aligned_cols=58 Identities=29% Similarity=0.338 Sum_probs=49.8
Q ss_pred Hhhhccceeeecccc-----ccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 301 ALIECDLTLLGATGI-----EDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 301 ~~~d~DgTllg~~~~-----~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
+++|.||||...... ..++.+++.+.+++|+++|++++++||+....+...+...|+.
T Consensus 2 ~vfD~D~tl~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~ 64 (139)
T cd01427 2 VLFDLDGTLLDSEPGIAEIEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLD 64 (139)
T ss_pred eEEccCCceEccCccccccccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCc
Confidence 368999999886321 1378899999999999999999999999999999999988874
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.24 E-value=1.1e-05 Score=77.63 Aligned_cols=122 Identities=21% Similarity=0.193 Sum_probs=83.1
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCcccccc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCN 397 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~ 397 (658)
++.|++.+.++.|+++ ++++++||.....+..+...+|+...-...+.
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~------------------------------- 115 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSLE------------------------------- 115 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcceEE-------------------------------
Confidence 5679999999999999 99999999999999999998887321000000
Q ss_pred ccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEE-EcCcccH
Q 041225 398 SKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCC-RVAPLQK 476 (658)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~-~~~~~~K 476 (658)
.++. ...+.. ...|..|
T Consensus 116 -----------------------------------------~~~~---------------------~~i~~~~~~~p~~k 133 (205)
T PRK13582 116 -----------------------------------------VDED---------------------GMITGYDLRQPDGK 133 (205)
T ss_pred -----------------------------------------ECCC---------------------CeEECccccccchH
Confidence 0000 000000 1235678
Q ss_pred HHHHHHHHhcCCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhccc-ccccccch
Q 041225 477 AGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDF-AMGQFRFL 535 (658)
Q Consensus 477 ~~~v~~L~~~~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~-vl~~~~~l 535 (658)
...++.+... +..+++||||.||++|.+.|++|++....+. .....+++ ++.++.-+
T Consensus 134 ~~~l~~~~~~-~~~~v~iGDs~~D~~~~~aa~~~v~~~~~~~-~~~~~~~~~~~~~~~el 191 (205)
T PRK13582 134 RQAVKALKSL-GYRVIAAGDSYNDTTMLGEADAGILFRPPAN-VIAEFPQFPAVHTYDEL 191 (205)
T ss_pred HHHHHHHHHh-CCeEEEEeCCHHHHHHHHhCCCCEEECCCHH-HHHhCCcccccCCHHHH
Confidence 7888877765 5789999999999999999999998743322 23334554 66666544
|
|
| >PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3 | Back alignment and domain information |
|---|
Probab=98.22 E-value=3e-06 Score=83.30 Aligned_cols=196 Identities=16% Similarity=0.087 Sum_probs=84.6
Q ss_pred hhhccceeeecccccc--ccCCChHHHHHHHHhcC-CeEEEEecCChhHHHHHHH--HcCccCCCccEEEEcCC------
Q 041225 302 LIECDLTLLGATGIED--KLQDGVPEAIEALRQAG-IKVWVLTGDKQDTAISIAL--SCKLLTPDMQQIIINGN------ 370 (658)
Q Consensus 302 ~~d~DgTllg~~~~~d--~l~~~~~~aI~~l~~~G-I~v~i~TGr~~~~a~~ia~--~~gl~~~~~~~i~~~g~------ 370 (658)
++|.||||.....-.+ .+.+++.++|++|.+.. ..|+|+|||+......... .++++..++-.+...+.
T Consensus 1 ~lDyDGTL~p~~~~p~~~~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~~~~~~~~~i~l~gehG~e~~~~~~~~~~~~ 80 (235)
T PF02358_consen 1 FLDYDGTLAPIVDDPDAAVPPPELRELLRALAADPNNTVAIVSGRSLDDLERFGGIPNIGLAGEHGAEIRRPGGSEWTNL 80 (235)
T ss_dssp EEE-TTTSS---S-GGG----HHHHHHHHHHHHHSE--EEEE-SS-HHHHHHH-S-SS-EEEEGGGTEEEETTE-EEE-T
T ss_pred CcccCCccCCCCCCccccCCCHHHHHHHHHHhccCCCEEEEEEeCCHHHhHHhcCCCCceEEEEeeEEeccCcccccccc
Confidence 4799999998755222 45688999999998775 4899999999988555432 23333344443333322
Q ss_pred ----CHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCc----
Q 041225 371 ----SEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGN---- 442 (658)
Q Consensus 371 ----~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---- 442 (658)
..+....+.+.++.... ...+..+ ..+...+.+.....
T Consensus 81 ~~~~~~~~~~~~~~~l~~~~~-----------------------~~pG~~i-----------E~K~~sv~~Hyr~~~~~~ 126 (235)
T PF02358_consen 81 PADEDLEWKDEVREILEYFAE-----------------------RTPGSFI-----------EDKEFSVAFHYRNAPPEF 126 (235)
T ss_dssp TGGGGHHHHHHHHHHHTTHHH-----------------------HSTT-EE-----------EEETTEEEEE-TTS-ST-
T ss_pred ccccchHHHHHHHHHHHHHHh-----------------------hccCcEE-----------EECCeEEEEEecCCCcch
Confidence 01111111111111000 0000000 00111122221111
Q ss_pred ------cHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhcC------CCeEEEEcCCcCChhhhhhc---
Q 041225 443 ------SLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRT------DDMTLAIGDGANDVSMIQMA--- 507 (658)
Q Consensus 443 ------~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~~------~~~v~aiGDg~NDi~Ml~~A--- 507 (658)
++...+.+........-+..++.++++++.+.+||.+++.|.+.. ..-++++||...|-.||+..
T Consensus 127 ~~~~~~~l~~~l~~~~~~~~~~~v~~g~~~vEvrp~~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~ 206 (235)
T PF02358_consen 127 GEAQARELAEQLREILASHPGLEVVPGKKVVEVRPPGVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALREL 206 (235)
T ss_dssp ---THHHHHHHHHHHHHHH-T-EEEE-SSEEEEE-TT--HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS
T ss_pred hhhHHHHHHHHHHHHHHhCCCEEEEECCCEEEEEeCCCChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhc
Confidence 111111121222212234566788999999999999999999882 24799999999999999974
Q ss_pred ---ceeEEecCccchhhhhhccccccc
Q 041225 508 ---DVGVGICGQEGRQAVMASDFAMGQ 531 (658)
Q Consensus 508 ---~vgIam~~~~~~~~k~~AD~vl~~ 531 (658)
+++|-+..........+|++-+.+
T Consensus 207 ~~~~~~i~V~~~~~~~~~t~A~y~l~~ 233 (235)
T PF02358_consen 207 EEGGFGIKVGSVSVGEKPTAASYRLDD 233 (235)
T ss_dssp ----EEEEES-----------------
T ss_pred ccCCCCeEEEeeccccccccccccccc
Confidence 456666333222244566665544
|
1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A. |
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=98.21 E-value=3e-06 Score=81.29 Aligned_cols=41 Identities=10% Similarity=0.007 Sum_probs=38.1
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
.+.+++.+.|+.++++|++++++||.....+..+++.+|+.
T Consensus 87 ~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~ 127 (202)
T TIGR01490 87 ILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGID 127 (202)
T ss_pred hccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCc
Confidence 68899999999999999999999999999999999998873
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=98.13 E-value=1.6e-05 Score=77.58 Aligned_cols=41 Identities=24% Similarity=0.498 Sum_probs=38.2
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
++.|++.+.++.|+++|++++|+||.....+..+++.+|+.
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~ 124 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIP 124 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCC
Confidence 57899999999999999999999999999999999998874
|
|
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=98.12 E-value=8.7e-06 Score=76.26 Aligned_cols=41 Identities=22% Similarity=0.248 Sum_probs=37.5
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
++.+++.+.++.++++|++++++||.....+.+++..+|+.
T Consensus 73 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~ 113 (177)
T TIGR01488 73 ALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGID 113 (177)
T ss_pred CcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCc
Confidence 46799999999999999999999999999999999988873
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=98.12 E-value=1.2e-05 Score=76.34 Aligned_cols=38 Identities=26% Similarity=0.337 Sum_probs=35.5
Q ss_pred CChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 321 DGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 321 ~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
+++.+.|+.++++|++++|+||.....+.++++.+|+.
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~ 129 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGID 129 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSS
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCC
Confidence 77779999999999999999999999999999999884
|
|
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=98.06 E-value=1.9e-05 Score=76.37 Aligned_cols=39 Identities=15% Similarity=0.324 Sum_probs=35.6
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcC
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCK 356 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~g 356 (658)
+++|++.+.++.|+++|++++|+||.....+.++++.++
T Consensus 70 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~ 108 (214)
T TIGR03333 70 EIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIV 108 (214)
T ss_pred cccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhC
Confidence 799999999999999999999999999888888887664
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=98.04 E-value=1.5e-05 Score=70.74 Aligned_cols=57 Identities=25% Similarity=0.303 Sum_probs=45.3
Q ss_pred Hhhhccceeeecccc-----ccccCCChHHHHHHHHhcCCeEEEEecCC--------hhHHHHHHHHcCc
Q 041225 301 ALIECDLTLLGATGI-----EDKLQDGVPEAIEALRQAGIKVWVLTGDK--------QDTAISIALSCKL 357 (658)
Q Consensus 301 ~~~d~DgTllg~~~~-----~d~l~~~~~~aI~~l~~~GI~v~i~TGr~--------~~~a~~ia~~~gl 357 (658)
+++|+||||++.... +..+.+++.++++.|+++|++++++|+.. ...+..+.+.+++
T Consensus 3 ~~~D~dgtL~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l 72 (132)
T TIGR01662 3 VVLDLDGTLTDDVPYVDDEDERILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGV 72 (132)
T ss_pred EEEeCCCceecCCCCCCCHHHheeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCC
Confidence 468999999963111 23678999999999999999999999998 5666667776665
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=98.00 E-value=4.1e-05 Score=73.51 Aligned_cols=108 Identities=14% Similarity=0.173 Sum_probs=77.6
Q ss_pred ccCCChHHHHH-HHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCccccc
Q 041225 318 KLQDGVPEAIE-ALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKC 396 (658)
Q Consensus 318 ~l~~~~~~aI~-~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~ 396 (658)
.+.|++.++|+ .++++|++++++|+-....+.++++..++... ..+|...- +
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~-~~~i~t~l-e------------------------- 146 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHR-LNLIASQI-E------------------------- 146 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhcccccc-CcEEEEEe-E-------------------------
Confidence 57899999996 78889999999999999999999988665332 12222110 0
Q ss_pred cccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccH
Q 041225 397 NSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQK 476 (658)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K 476 (658)
+.+| .......+.+..|
T Consensus 147 -----------------------------------------~~~g----------------------g~~~g~~c~g~~K 163 (210)
T TIGR01545 147 -----------------------------------------RGNG----------------------GWVLPLRCLGHEK 163 (210)
T ss_pred -----------------------------------------EeCC----------------------ceEcCccCCChHH
Confidence 0000 0112345667889
Q ss_pred HHHHHHHHhcCCCeEEEEcCCcCChhhhhhcceeEEecC
Q 041225 477 AGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICG 515 (658)
Q Consensus 477 ~~~v~~L~~~~~~~v~aiGDg~NDi~Ml~~A~vgIam~~ 515 (658)
...++.....+.....|-|||.||.|||+.||.+++++.
T Consensus 164 v~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vnp 202 (210)
T TIGR01545 164 VAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVSK 202 (210)
T ss_pred HHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEECc
Confidence 888876664334567899999999999999999999943
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=97.94 E-value=4.2e-05 Score=72.35 Aligned_cols=41 Identities=15% Similarity=0.152 Sum_probs=37.7
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
++.+++.+.++.|+++|++++++|+.....+..+....|+.
T Consensus 72 ~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~ 112 (188)
T TIGR01489 72 PIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEK 112 (188)
T ss_pred CCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCCh
Confidence 78899999999999999999999999999999988888874
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.92 E-value=0.00012 Score=70.64 Aligned_cols=108 Identities=15% Similarity=0.120 Sum_probs=77.8
Q ss_pred ccCCChHHHH-HHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCccccc
Q 041225 318 KLQDGVPEAI-EALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKC 396 (658)
Q Consensus 318 ~l~~~~~~aI-~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~ 396 (658)
.+.|++.+.| +.++++|++++++||.....+.+++..+|+.. ...+|...-
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~-~~~~i~t~l--------------------------- 146 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLP-RVNLIASQM--------------------------- 146 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccc-cCceEEEEE---------------------------
Confidence 4589999999 56888999999999999999999999988622 222322110
Q ss_pred cccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccH
Q 041225 397 NSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQK 476 (658)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K 476 (658)
+ . ..........+.+..|
T Consensus 147 ----------------------------------------------~---------------~-~~tg~~~g~~c~g~~K 164 (211)
T PRK11590 147 ----------------------------------------------Q---------------R-RYGGWVLTLRCLGHEK 164 (211)
T ss_pred ----------------------------------------------E---------------E-EEccEECCccCCChHH
Confidence 0 0 0001122344667888
Q ss_pred HHHHHHHHhcCCCeEEEEcCCcCChhhhhhcceeEEecC
Q 041225 477 AGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICG 515 (658)
Q Consensus 477 ~~~v~~L~~~~~~~v~aiGDg~NDi~Ml~~A~vgIam~~ 515 (658)
...++.....+.....|-||+.||+|||+.|+.+++++.
T Consensus 165 ~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vnp 203 (211)
T PRK11590 165 VAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVTP 203 (211)
T ss_pred HHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEECc
Confidence 888887654345667899999999999999999999943
|
|
| >COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.92 E-value=0.00035 Score=68.55 Aligned_cols=172 Identities=15% Similarity=0.108 Sum_probs=99.6
Q ss_pred HHHhhhccceeeecccccc--ccCCChHHHHHHHHhc-CCeEEEEecCChhHHHHHHH--HcCccCCCccEE-EEcCC--
Q 041225 299 TAALIECDLTLLGATGIED--KLQDGVPEAIEALRQA-GIKVWVLTGDKQDTAISIAL--SCKLLTPDMQQI-IINGN-- 370 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~d--~l~~~~~~aI~~l~~~-GI~v~i~TGr~~~~a~~ia~--~~gl~~~~~~~i-~~~g~-- 370 (658)
..+++|.||||....-..+ .+.++..+++++|... ...++|+|||+......... .+|++..+|-.+ ..+|.
T Consensus 19 ~~~~lDyDGTl~~i~~~p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~v~~i~l~aehGa~~r~~~g~~~ 98 (266)
T COG1877 19 RLLFLDYDGTLTEIVPHPEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFGVPGIGLIAEHGAEVRDPNGKWW 98 (266)
T ss_pred eEEEEeccccccccccCccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcCCCCccEEEecceEEecCCCCee
Confidence 4578999999998754333 3567889999999888 45799999999998877765 333444444333 23332
Q ss_pred ----CHH------HHHHHHHHHHHhcC-cccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEE
Q 041225 371 ----SEE------ECKDLLADAKARYG-VKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALII 439 (658)
Q Consensus 371 ----~~~------~~~~ii~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 439 (658)
... ++.++++..-.... ..... +-..+.+..
T Consensus 99 ~~~~~~~~~~~~~~v~~~l~~~v~r~pGs~iE~--------------------------------------K~~a~~~Hy 140 (266)
T COG1877 99 INLAEEADLRWLKEVAAILEYYVERTPGSYIER--------------------------------------KGFAVALHY 140 (266)
T ss_pred EecCHHHHhhHHHHHHHHHHHHhhcCCCeEEEE--------------------------------------cCcEEEEee
Confidence 111 12222222211110 00000 000111111
Q ss_pred eC--ccH--HHHHHHhhH-Hhhh-hhhccCCeeEEEEcCcccHHHHHHHHHhc-CC--CeEEEEcCCcCChhhhhhcc
Q 041225 440 DG--NSL--VYILEKDLE-SDLF-DLATSCRVVLCCRVAPLQKAGIVDLIKSR-TD--DMTLAIGDGANDVSMIQMAD 508 (658)
Q Consensus 440 ~~--~~~--~~~~~~~~~-~~~~-~i~~s~~~~i~~~~~~~~K~~~v~~L~~~-~~--~~v~aiGDg~NDi~Ml~~A~ 508 (658)
.. +.. ...+..... .... --+..++.+|++++.+.+||.+++.+.+. +. .-+++.||..-|=.||+..+
T Consensus 141 r~a~~~~~~~~a~~~~~~~~~~~~~~v~~gk~vVEvrp~~~~KG~a~~~i~~~~~~~~~~~~~aGDD~TDE~~F~~v~ 218 (266)
T COG1877 141 RNAEDDEGAALALAEAATLINELKLRVTPGKMVVELRPPGVSKGAAIKYIMDELPFDGRFPIFAGDDLTDEDAFAAVN 218 (266)
T ss_pred ccCCchhhHHHHHHHHHhccccccEEEEeCceEEEEeeCCcchHHHHHHHHhcCCCCCCcceecCCCCccHHHHHhhc
Confidence 10 000 011111100 0111 22455678999999999999999988887 22 35999999999999999987
|
|
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.86 E-value=7.1e-05 Score=73.14 Aligned_cols=41 Identities=24% Similarity=0.320 Sum_probs=37.8
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
++.|++.++++.|+++|++++++||.....+..+.+.+|+.
T Consensus 93 ~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~ 133 (226)
T PRK13222 93 RLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIA 133 (226)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCc
Confidence 68899999999999999999999999999888888888874
|
|
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=97.86 E-value=0.0003 Score=75.77 Aligned_cols=40 Identities=25% Similarity=0.266 Sum_probs=37.8
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKL 357 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl 357 (658)
++.+++.+.+++++++|++++++||.+...+..+++.+|+
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGl 111 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGL 111 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC
Confidence 5789999999999999999999999999999999999987
|
|
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.85 E-value=7.3e-05 Score=72.63 Aligned_cols=38 Identities=13% Similarity=0.321 Sum_probs=35.6
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSC 355 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~ 355 (658)
++.|++.+.++.|+++|++++|+||-....+..+.+..
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~ 111 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL 111 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh
Confidence 68999999999999999999999999998888888876
|
|
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.72 E-value=8.2e-05 Score=72.28 Aligned_cols=43 Identities=26% Similarity=0.284 Sum_probs=39.7
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCC
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTP 360 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~ 360 (658)
.+-|++.+++..|+++|++..++|+++...+..+.+..|+...
T Consensus 89 ~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~ 131 (220)
T COG0546 89 RLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADY 131 (220)
T ss_pred ccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccc
Confidence 5779999999999999999999999999999999999998554
|
|
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.00016 Score=69.57 Aligned_cols=41 Identities=32% Similarity=0.431 Sum_probs=37.3
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
++.+++.+.|++|+++|++++++||.....+..+.+..|+.
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~ 115 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLL 115 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCCh
Confidence 67899999999999999999999999988888888888874
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=97.70 E-value=8.8e-05 Score=69.32 Aligned_cols=46 Identities=24% Similarity=0.343 Sum_probs=35.9
Q ss_pred HHhhhccceeeecccc-----ccccCCChHHHHHHHHhcCCeEEEEecCCh
Q 041225 300 AALIECDLTLLGATGI-----EDKLQDGVPEAIEALRQAGIKVWVLTGDKQ 345 (658)
Q Consensus 300 ~~~~d~DgTllg~~~~-----~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~ 345 (658)
++++|.||||+...+. +-++.|++.++|+.|+++|++++++|.-+.
T Consensus 3 ~~~~D~Dgtl~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~ 53 (176)
T TIGR00213 3 AIFLDRDGTINIDHGYVHEIDNFEFIDGVIDALRELKKMGYALVLVTNQSG 53 (176)
T ss_pred EEEEeCCCCEeCCCCCCCCHHHeEECCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence 4678999999942111 113568999999999999999999998663
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.00014 Score=72.99 Aligned_cols=40 Identities=15% Similarity=0.306 Sum_probs=36.0
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKL 357 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl 357 (658)
.+.+++.++|+.|+++|++++++||.+...+..+....++
T Consensus 101 ~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i 140 (272)
T PRK13223 101 VVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKI 140 (272)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCc
Confidence 6789999999999999999999999988888888777776
|
|
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.00011 Score=72.88 Aligned_cols=66 Identities=12% Similarity=0.150 Sum_probs=53.2
Q ss_pred HhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEec---CChhHHHHHHHHcCccCCCccEEEEcCC
Q 041225 301 ALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTG---DKQDTAISIALSCKLLTPDMQQIIINGN 370 (658)
Q Consensus 301 ~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TG---r~~~~a~~ia~~~gl~~~~~~~i~~~g~ 370 (658)
+++|+||||+.. .+.+ +++.++|++|+++|++++++|| |+...+....+.+|+-...++++..++.
T Consensus 4 ~~~D~DGtl~~~---~~~i-~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~~~~iit~~~~ 72 (249)
T TIGR01457 4 YLIDLDGTMYKG---KERI-PEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPATLETVFTASMA 72 (249)
T ss_pred EEEeCCCceEcC---CeeC-cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEeeHHHH
Confidence 468999999985 3344 5899999999999999999995 8888888888899986665666655443
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00015 Score=70.08 Aligned_cols=41 Identities=22% Similarity=0.268 Sum_probs=37.7
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
++.|++.++++.|+++|++++++|+.+...+..+.+..|+.
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~ 125 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLA 125 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcH
Confidence 68899999999999999999999999998999998888874
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00018 Score=70.17 Aligned_cols=42 Identities=19% Similarity=0.231 Sum_probs=38.1
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccC
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLT 359 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~ 359 (658)
++-|++.++|+.|+++|++++++||.....+..+.+..++..
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~ 133 (222)
T PRK10826 92 PLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRD 133 (222)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchh
Confidence 688999999999999999999999999998888888888743
|
|
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=97.60 E-value=9.7e-05 Score=71.75 Aligned_cols=36 Identities=14% Similarity=0.296 Sum_probs=31.7
Q ss_pred hHHHHHHHHhcCCeEEEEecC----ChhHHHHHHHHcCcc
Q 041225 323 VPEAIEALRQAGIKVWVLTGD----KQDTAISIALSCKLL 358 (658)
Q Consensus 323 ~~~aI~~l~~~GI~v~i~TGr----~~~~a~~ia~~~gl~ 358 (658)
+.+.++.++++|+++.++|+| ...++..+.+.+|+.
T Consensus 119 a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~ 158 (237)
T TIGR01672 119 ARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIP 158 (237)
T ss_pred HHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCc
Confidence 889999999999999999999 556788888888873
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.0001 Score=75.52 Aligned_cols=59 Identities=24% Similarity=0.228 Sum_probs=50.8
Q ss_pred HHhhhccceeeecccc---------ccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 300 AALIECDLTLLGATGI---------EDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 300 ~~~~d~DgTllg~~~~---------~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
.+.+|.|||+.....- .+.+.+++.++|+.|+++|++++++|||+...+..+.+.+++.
T Consensus 160 ~~~~D~dgtl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~ 227 (300)
T PHA02530 160 AVIFDIDGTLAKMGGRSPYDWTKVKEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQT 227 (300)
T ss_pred EEEEECCCcCcCCCCCCccchhhcccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHc
Confidence 4678999999976442 4578899999999999999999999999999999888888763
|
|
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.00023 Score=66.14 Aligned_cols=46 Identities=26% Similarity=0.296 Sum_probs=37.3
Q ss_pred HHhhhccceeeecccccc----ccCCChHHHHHHHHhcCCeEEEEecCCh
Q 041225 300 AALIECDLTLLGATGIED----KLQDGVPEAIEALRQAGIKVWVLTGDKQ 345 (658)
Q Consensus 300 ~~~~d~DgTllg~~~~~d----~l~~~~~~aI~~l~~~GI~v~i~TGr~~ 345 (658)
.+++|.|||+.+...+.. ++-|++.+++++|+++|++++++|+.+.
T Consensus 6 ~~~~d~d~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~ 55 (173)
T PRK06769 6 AIFIDRDGTIGGDTTIHYPGSFTLFPFTKASLQKLKANHIKIFSFTNQPG 55 (173)
T ss_pred EEEEeCCCcccCCCCCCCHHHeEECCCHHHHHHHHHHCCCEEEEEECCch
Confidence 457899999977644332 3579999999999999999999998753
|
|
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.0013 Score=65.03 Aligned_cols=44 Identities=18% Similarity=0.358 Sum_probs=40.4
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCC
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPD 361 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~ 361 (658)
+++|++.+.++.|+++|+++.++||-....+..+.+++|+..++
T Consensus 121 ~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~ 164 (277)
T TIGR01544 121 MLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPN 164 (277)
T ss_pred ccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcC
Confidence 68999999999999999999999999999999999999986544
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.00039 Score=65.28 Aligned_cols=46 Identities=30% Similarity=0.307 Sum_probs=35.8
Q ss_pred HHHhhhccceeeecc-cccc-----ccCCChHHHHHHHHhcCCeEEEEecCC
Q 041225 299 TAALIECDLTLLGAT-GIED-----KLQDGVPEAIEALRQAGIKVWVLTGDK 344 (658)
Q Consensus 299 ~~~~~d~DgTllg~~-~~~d-----~l~~~~~~aI~~l~~~GI~v~i~TGr~ 344 (658)
+.+++|.||||.-.. .+.+ .+.|++.+++++|+++|++++++|..+
T Consensus 4 ~~~~~d~~~t~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~ 55 (181)
T PRK08942 4 KAIFLDRDGVINVDSDGYVKSPDEWIPIPGSIEAIARLKQAGYRVVVATNQS 55 (181)
T ss_pred cEEEEECCCCcccCCccccCCHHHeEECCCHHHHHHHHHHCCCEEEEEeCCc
Confidence 456899999976543 1111 256899999999999999999999876
|
|
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.00038 Score=67.38 Aligned_cols=41 Identities=22% Similarity=0.163 Sum_probs=37.3
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
++.|++.++++.|+++|+++.++||.....+..+.+..|+.
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~ 122 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLD 122 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCh
Confidence 47799999999999999999999999998888888888874
|
|
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.00013 Score=71.56 Aligned_cols=67 Identities=18% Similarity=0.236 Sum_probs=55.6
Q ss_pred HHHhhhccceeeeccccccc--cC-CChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcC
Q 041225 299 TAALIECDLTLLGATGIEDK--LQ-DGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIING 369 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~d~--l~-~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g 369 (658)
.++++|+||||++. +++ ++ |++.+++++|+++|++++++|+.....+....+.+|+...-+ .+..+|
T Consensus 127 kvIvFDLDgTLi~~---~~~v~irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~YFd-vIIs~G 196 (301)
T TIGR01684 127 HVVVFDLDSTLITD---EEPVRIRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDRYFD-IIISGG 196 (301)
T ss_pred eEEEEecCCCCcCC---CCccccCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCcccC-EEEECC
Confidence 56889999999997 445 45 999999999999999999999999999999999999965432 344443
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.00043 Score=62.48 Aligned_cols=44 Identities=27% Similarity=0.293 Sum_probs=35.7
Q ss_pred Hhhhccceeeeccccc-------cccCCChHHHHHHHHhcCCeEEEEecCC
Q 041225 301 ALIECDLTLLGATGIE-------DKLQDGVPEAIEALRQAGIKVWVLTGDK 344 (658)
Q Consensus 301 ~~~d~DgTllg~~~~~-------d~l~~~~~~aI~~l~~~GI~v~i~TGr~ 344 (658)
.++|.||||.....-. -++.|++.++++.|+++|++++++|+.+
T Consensus 3 ~~~d~dgtl~~~~~~~~~~~~~~~~~~~g~~~~l~~Lk~~g~~~~I~Sn~~ 53 (147)
T TIGR01656 3 LFLDRDGVINEDTVSDYPRSLDDWQLRPGAVPALLTLRAAGYTVVVVTNQS 53 (147)
T ss_pred EEEeCCCceeccCCcccCCCHHHeEEcCChHHHHHHHHHCCCEEEEEeCCC
Confidence 3589999999864200 1358999999999999999999999875
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.00087 Score=67.16 Aligned_cols=41 Identities=17% Similarity=0.255 Sum_probs=37.8
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
++-|++.+.++.|+++|+++.++|+.....+..+.+..|+.
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~ 182 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLR 182 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCh
Confidence 57799999999999999999999999999999998888874
|
|
| >PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.0046 Score=71.38 Aligned_cols=56 Identities=18% Similarity=0.062 Sum_probs=43.0
Q ss_pred HHHhhhccceeeecccc-----ccccCCChHHHHHHHHhc-CCeEEEEecCChhHHHHHHHH
Q 041225 299 TAALIECDLTLLGATGI-----EDKLQDGVPEAIEALRQA-GIKVWVLTGDKQDTAISIALS 354 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~-----~d~l~~~~~~aI~~l~~~-GI~v~i~TGr~~~~a~~ia~~ 354 (658)
.++++|.||||.....- .-.+.++..+++++|.+. +..|+|+|||+..........
T Consensus 508 rll~LDyDGTL~~~~~~~~~p~~a~p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~ 569 (797)
T PLN03063 508 RLLILGFYGTLTEPRNSQIKEMDLGLHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFGE 569 (797)
T ss_pred eEEEEecCccccCCCCCccccccCCCCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHhCC
Confidence 45689999999964220 112667889999999865 789999999999998877654
|
|
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.00016 Score=63.48 Aligned_cols=56 Identities=14% Similarity=0.188 Sum_probs=43.4
Q ss_pred Hhhhccceeeeccc---ccc------ccCCChHHHHHHHHhcCCeEEEEecC-ChhHHHHHHHHcC
Q 041225 301 ALIECDLTLLGATG---IED------KLQDGVPEAIEALRQAGIKVWVLTGD-KQDTAISIALSCK 356 (658)
Q Consensus 301 ~~~d~DgTllg~~~---~~d------~l~~~~~~aI~~l~~~GI~v~i~TGr-~~~~a~~ia~~~g 356 (658)
+.+|+||||.+.-. .++ ++.+++.+.++.|+++|++++++|+. ....+..+.+..+
T Consensus 3 i~~DlD~Tl~~~~~~~~~~~~~~~~~~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 3 IVFDLDNTLWTGENIVVGEDPIIDLEVTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred EEEeCCCCCCCCCcccccCCcchhhHHHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 45799999998721 122 25789999999999999999999999 6666666655544
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.00075 Score=66.03 Aligned_cols=41 Identities=24% Similarity=0.156 Sum_probs=35.9
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
++.|++.+.++.|+++|+++.++|+.+...+..+.+..|+.
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~ 135 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWE 135 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCch
Confidence 57899999999999999999999999888777777777763
|
|
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.00035 Score=64.36 Aligned_cols=48 Identities=21% Similarity=0.339 Sum_probs=36.7
Q ss_pred HHHHhhhccceeeeccccc----c--c---cCCChHHHHHHHHhcCCeEEEEecCCh
Q 041225 298 QTAALIECDLTLLGATGIE----D--K---LQDGVPEAIEALRQAGIKVWVLTGDKQ 345 (658)
Q Consensus 298 ~~~~~~d~DgTllg~~~~~----d--~---l~~~~~~aI~~l~~~GI~v~i~TGr~~ 345 (658)
...+++|+||||+....-. + + +-|++.++|++|+++|+++.++|..+.
T Consensus 13 ~k~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~TN~~~ 69 (166)
T TIGR01664 13 SKVAAFDLDGTLITTRSGKVFPTSASDWRFLYPEIPAKLQELDDEGYKIVIFTNQSG 69 (166)
T ss_pred CcEEEEeCCCceEecCCCCcccCChHHeEEecCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence 3557889999999753211 0 1 348999999999999999999997543
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase | Back alignment and domain information |
|---|
Probab=97.31 E-value=8.2e-05 Score=64.27 Aligned_cols=50 Identities=14% Similarity=0.121 Sum_probs=40.0
Q ss_pred HHhhhccceeeecc-c--cccccCCChHHHHHHHHhcCCeEEEEecCChhHHH
Q 041225 300 AALIECDLTLLGAT-G--IEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAI 349 (658)
Q Consensus 300 ~~~~d~DgTllg~~-~--~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~ 349 (658)
.+++|+||||+..- + ..+++.+++.+++++++++|+.++++|||+.....
T Consensus 3 ~i~~DiDGTL~~~~~~~y~~~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~ 55 (126)
T TIGR01689 3 RLVMDLDNTITLTENGDYANVAPILAVIEKLRHYKALGFEIVISSSRNMRTYE 55 (126)
T ss_pred EEEEeCCCCcccCCCCcccccccCHHHHHHHHHHHHCCCEEEEECCCCchhhh
Confidence 45789999998642 1 12457789999999999999999999999987754
|
Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology. |
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.00038 Score=63.67 Aligned_cols=44 Identities=27% Similarity=0.372 Sum_probs=35.4
Q ss_pred HHhhhccceeeeccccc--------cccCCChHHHHHHHHhcCCeEEEEecC
Q 041225 300 AALIECDLTLLGATGIE--------DKLQDGVPEAIEALRQAGIKVWVLTGD 343 (658)
Q Consensus 300 ~~~~d~DgTllg~~~~~--------d~l~~~~~~aI~~l~~~GI~v~i~TGr 343 (658)
+.++|.||||....+.. -++-|++.++|++|+++|++++++|..
T Consensus 3 ~~~~d~dg~l~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~g~~l~IvSN~ 54 (161)
T TIGR01261 3 ILFIDRDGTLIEEPPSDFQVDALEKLRFEKGVIPALLKLKKAGYKFVMVTNQ 54 (161)
T ss_pred EEEEeCCCCccccCCCccccCCHHHeeECCCHHHHHHHHHHCCCeEEEEeCC
Confidence 46799999998854311 135689999999999999999999975
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.0012 Score=65.77 Aligned_cols=42 Identities=17% Similarity=0.173 Sum_probs=38.0
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccC
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLT 359 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~ 359 (658)
++.+++.+.|+.|+++|++++++|+.+...+..+....|+..
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~ 150 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEG 150 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHh
Confidence 578999999999999999999999999999998888888743
|
|
| >PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.0056 Score=70.66 Aligned_cols=49 Identities=18% Similarity=0.180 Sum_probs=40.8
Q ss_pred hccCCeeEEEEcCcccHHHHHHHHHhc---------CCCeEEEEcCCcC-Chhhhhhcc
Q 041225 460 ATSCRVVLCCRVAPLQKAGIVDLIKSR---------TDDMTLAIGDGAN-DVSMIQMAD 508 (658)
Q Consensus 460 ~~s~~~~i~~~~~~~~K~~~v~~L~~~---------~~~~v~aiGDg~N-Di~Ml~~A~ 508 (658)
+..++.++++++.+.+||.+++.+.+. +.+-|+++||..- |=.||+.-.
T Consensus 753 V~~Gk~VVEVrP~gvnKG~Av~~ll~~~~~~~~~~~~~DFvlc~GDd~~~DEdmF~~l~ 811 (934)
T PLN03064 753 VVQGSRSVEVRPVGVTKGAAIDRILGEIVHSKSMTTPIDYVLCIGHFLGKDEDIYTFFE 811 (934)
T ss_pred EEeCCeEEEEEcCCCCHHHHHHHHHHhhhhccccCCCCCEEEEeCCCCCCcHHHHHHHh
Confidence 456778999999999999999999874 2467999999654 999999754
|
|
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.0016 Score=63.20 Aligned_cols=41 Identities=34% Similarity=0.336 Sum_probs=38.0
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
++.+++.+.++.|+++|+++.++||.....+..+.+..|+.
T Consensus 87 ~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~ 127 (220)
T TIGR03351 87 VALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWT 127 (220)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhh
Confidence 68899999999999999999999999999999988888874
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.00069 Score=61.23 Aligned_cols=56 Identities=20% Similarity=0.131 Sum_probs=45.7
Q ss_pred Hhhhccceeeeccc------ccc-----------------ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCc
Q 041225 301 ALIECDLTLLGATG------IED-----------------KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKL 357 (658)
Q Consensus 301 ~~~d~DgTllg~~~------~~d-----------------~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl 357 (658)
..+|+|+||+.... -.+ .++|++.+.++.|+ +++++.++|+-+...+..+.+.+++
T Consensus 5 lvldld~tl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~ 83 (148)
T smart00577 5 LVLDLDETLVHSTHRSFKEWTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDP 83 (148)
T ss_pred EEEeCCCCeECCCCCcCCCCCccceEEEEEeCCceEEEEEEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCc
Confidence 45789999998631 011 56899999999998 6799999999999999998888776
|
|
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.0015 Score=60.55 Aligned_cols=56 Identities=18% Similarity=0.310 Sum_probs=43.3
Q ss_pred HHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCC-hhHHHHHHHHcCc
Q 041225 300 AALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDK-QDTAISIALSCKL 357 (658)
Q Consensus 300 ~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~-~~~a~~ia~~~gl 357 (658)
++++|.|||+...- ...+.+++.++++.|++.|++++++|+.+ ...+..+.+.+|+
T Consensus 27 ~vv~D~Dgtl~~~~--~~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl 83 (170)
T TIGR01668 27 GVVLDKDNTLVYPD--HNEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGI 83 (170)
T ss_pred EEEEecCCccccCC--CCCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCC
Confidence 35678999998641 23678999999999999999999999987 4555555555554
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.0028 Score=65.82 Aligned_cols=42 Identities=17% Similarity=0.147 Sum_probs=38.5
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccC
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLT 359 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~ 359 (658)
.+.+++.+.|+.|+++|+++.++|+.+...+..+.+..|+..
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~ 257 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRG 257 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHH
Confidence 577999999999999999999999999999999999888743
|
|
| >PHA03398 viral phosphatase superfamily protein; Provisional | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.00058 Score=67.24 Aligned_cols=59 Identities=15% Similarity=0.214 Sum_probs=51.7
Q ss_pred HHHhhhccceeeecccccccc---CCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCC
Q 041225 299 TAALIECDLTLLGATGIEDKL---QDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTP 360 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~d~l---~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~ 360 (658)
..+++|+||||+.. ++++ .|++.++|++|+++|++++++|+.+...+..+....|+...
T Consensus 129 ~~i~~D~D~TL~~~---~~~v~irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~y 190 (303)
T PHA03398 129 HVIVFDLDSTLITD---EEPVRIRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEGY 190 (303)
T ss_pred cEEEEecCCCccCC---CCccccCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCcc
Confidence 46789999999997 5565 48999999999999999999998888888999999999644
|
|
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0039 Score=62.03 Aligned_cols=42 Identities=31% Similarity=0.287 Sum_probs=37.5
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccC
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLT 359 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~ 359 (658)
++-|++.+.|+.|+++|+++.++||.+...+..+.+..|+..
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~ 140 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQG 140 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcC
Confidence 577899999999999999999999999998888888887643
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.00083 Score=69.25 Aligned_cols=55 Identities=24% Similarity=0.324 Sum_probs=44.6
Q ss_pred HHhhhccceeeecccccc--------ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHH
Q 041225 300 AALIECDLTLLGATGIED--------KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALS 354 (658)
Q Consensus 300 ~~~~d~DgTllg~~~~~d--------~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~ 354 (658)
.+.+|.|.||-+-+.-++ ++.+++.++|+.|+++|+++.+||..+...+..+.+.
T Consensus 5 ~~v~DlDnTlw~gv~~e~g~~~i~~~~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~ 67 (320)
T TIGR01686 5 VLVLDLDNTLWGGVLGEDGIDNLNLSPLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFER 67 (320)
T ss_pred EEEEcCCCCCCCCEEccCCccccccCccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHh
Confidence 456899999976543244 2347899999999999999999999999988887766
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0033 Score=68.41 Aligned_cols=42 Identities=12% Similarity=0.158 Sum_probs=38.4
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccC
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLT 359 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~ 359 (658)
++.|++.+.|+.|+++|+++.++|+.....+..+.+.+|+..
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~ 371 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQ 371 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHh
Confidence 678999999999999999999999999999999998888743
|
|
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0042 Score=55.17 Aligned_cols=55 Identities=22% Similarity=0.286 Sum_probs=48.2
Q ss_pred HhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCc
Q 041225 301 ALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKL 357 (658)
Q Consensus 301 ~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl 357 (658)
+.+|.|.||+.-- .....|+.++-+.+++++|+++.++|-.+...+...+..+|+
T Consensus 31 vi~DlDNTLv~wd--~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v 85 (175)
T COG2179 31 VILDLDNTLVPWD--NPDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGV 85 (175)
T ss_pred EEEeccCceeccc--CCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCC
Confidence 4568999999862 345789999999999999999999999999999999999887
|
|
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.0037 Score=60.61 Aligned_cols=40 Identities=18% Similarity=0.148 Sum_probs=33.5
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKL 357 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl 357 (658)
.+.|++.+.|+.|+++|++++++|+.+...+.......++
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l 122 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGL 122 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCC
Confidence 5789999999999999999999999887766655555555
|
|
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.0013 Score=67.56 Aligned_cols=61 Identities=26% Similarity=0.440 Sum_probs=48.5
Q ss_pred HHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHH---HHcCccCCCcc
Q 041225 299 TAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIA---LSCKLLTPDMQ 363 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia---~~~gl~~~~~~ 363 (658)
..+++|+||||+.. +.+-+++.++|++|+++|++++++|+++..+...++ +.+|+....+.
T Consensus 29 ~~~~~D~DGtl~~~----~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~~~~~~ 92 (311)
T PLN02645 29 ETFIFDCDGVIWKG----DKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLNVTEEE 92 (311)
T ss_pred CEEEEeCcCCeEeC----CccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCCCChhh
Confidence 45689999999984 356699999999999999999999999976666555 56777544333
|
|
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.0083 Score=59.33 Aligned_cols=59 Identities=14% Similarity=0.207 Sum_probs=43.3
Q ss_pred HHHhhhccceeeecccc------c-----------------cccCCChHHHHHHHHhcCCeEEEEecCChhHHH---HHH
Q 041225 299 TAALIECDLTLLGATGI------E-----------------DKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAI---SIA 352 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~------~-----------------d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~---~ia 352 (658)
.++.+|+|+|+|..... . .++-|++.+.++.++++|++++++|+|...... ...
T Consensus 76 ~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~~w~~wv~~~~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~L 155 (266)
T TIGR01533 76 YAIVLDLDETVLDNSPYQGYQVLNNKPFDPETWDKWVQAAQAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNL 155 (266)
T ss_pred CEEEEeCccccccChHHHHHHhcCCCcCCHHHHHHHHHcCCCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHH
Confidence 47889999999865411 1 124588899999999999999999999854433 334
Q ss_pred HHcCc
Q 041225 353 LSCKL 357 (658)
Q Consensus 353 ~~~gl 357 (658)
+..|+
T Consensus 156 kk~Gi 160 (266)
T TIGR01533 156 KRFGF 160 (266)
T ss_pred HHcCc
Confidence 45555
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.0032 Score=60.36 Aligned_cols=30 Identities=17% Similarity=0.276 Sum_probs=26.7
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhH
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDT 347 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~ 347 (658)
+.-|.+.++++.++++|++|+++|||+...
T Consensus 120 paip~al~l~~~l~~~G~~Vf~lTGR~e~~ 149 (229)
T TIGR01675 120 PALPEGLKLYQKIIELGIKIFLLSGRWEEL 149 (229)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEcCCChHH
Confidence 456789999999999999999999999755
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0013 Score=65.41 Aligned_cols=64 Identities=17% Similarity=0.182 Sum_probs=47.3
Q ss_pred HhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhH---HHHHHHHcCccCCCccE
Q 041225 301 ALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDT---AISIALSCKLLTPDMQQ 364 (658)
Q Consensus 301 ~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~---a~~ia~~~gl~~~~~~~ 364 (658)
+++|+||||+......+.+.|++.++|++|+++|++++++|||+..+ .......+|+-...+++
T Consensus 4 i~~D~DGtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~~~~~~i 70 (257)
T TIGR01458 4 VLLDISGVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFDISEDEV 70 (257)
T ss_pred EEEeCCCeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCCCCHHHe
Confidence 56899999997522111288899999999999999999999988775 45555667764333333
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.0039 Score=55.77 Aligned_cols=49 Identities=22% Similarity=0.259 Sum_probs=40.0
Q ss_pred hhhccceeeec---------cccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHH
Q 041225 302 LIECDLTLLGA---------TGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISI 351 (658)
Q Consensus 302 ~~d~DgTllg~---------~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~i 351 (658)
+.|+|||+-.+ +| .|..++++.+..+.++++|++++-+|+|+...+...
T Consensus 3 vsDIDGTiT~SD~~G~i~~~~G-~d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~T 60 (157)
T PF08235_consen 3 VSDIDGTITKSDVLGHILPILG-KDWTHPGAAELYRKIADNGYKILYLTARPIGQANRT 60 (157)
T ss_pred EEeccCCcCccchhhhhhhccC-chhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHH
Confidence 45788887655 45 567899999999999999999999999998665443
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.013 Score=58.70 Aligned_cols=41 Identities=29% Similarity=0.263 Sum_probs=35.5
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
.+-|++.++|+.|+++|+++.++||.....+..+.+..++.
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~ 141 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQ 141 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhc
Confidence 56789999999999999999999999988887777766653
|
|
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.0058 Score=60.56 Aligned_cols=42 Identities=17% Similarity=0.128 Sum_probs=38.2
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccC
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLT 359 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~ 359 (658)
++-|++.++++.|+++|+++.++|+.+...+....+..|+..
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~ 149 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSD 149 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChh
Confidence 567899999999999999999999999999999998888754
|
|
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.0031 Score=64.98 Aligned_cols=45 Identities=27% Similarity=0.334 Sum_probs=36.6
Q ss_pred HHHhhhccceeeecccc--------ccccCCChHHHHHHHHhcCCeEEEEecC
Q 041225 299 TAALIECDLTLLGATGI--------EDKLQDGVPEAIEALRQAGIKVWVLTGD 343 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~--------~d~l~~~~~~aI~~l~~~GI~v~i~TGr 343 (658)
...++|.|||+.-...- +-++.|++.++|+.|+++|++++|+|+.
T Consensus 3 k~l~lDrDgtl~~~~~~~y~~~~~~~~~l~pGV~e~L~~Lk~~G~kL~IvTNq 55 (354)
T PRK05446 3 KILFIDRDGTLIEEPPTDFQVDSLDKLAFEPGVIPALLKLQKAGYKLVMVTNQ 55 (354)
T ss_pred cEEEEeCCCCccCCCCccccccCcccceECcCHHHHHHHHHhCCCeEEEEECC
Confidence 34679999999985320 1357799999999999999999999984
|
|
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.0047 Score=60.05 Aligned_cols=40 Identities=13% Similarity=0.232 Sum_probs=33.2
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCC----hhHHHHHHHHcCc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDK----QDTAISIALSCKL 357 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~----~~~a~~ia~~~gl 357 (658)
.+-+++++.|+.++++|+++.++|||. ..++..+.+..|+
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gi 157 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHI 157 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCC
Confidence 466789999999999999999999996 3466777766776
|
|
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.01 Score=57.69 Aligned_cols=41 Identities=15% Similarity=0.210 Sum_probs=36.5
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
++.|++.++|+.|+++|++++++|+.....+....+.+|+.
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~ 134 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVR 134 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChH
Confidence 57899999999999999999999999888888888887763
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.0063 Score=60.06 Aligned_cols=55 Identities=9% Similarity=0.128 Sum_probs=43.6
Q ss_pred HHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHH--HHHHHcCcc
Q 041225 300 AALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAI--SIALSCKLL 358 (658)
Q Consensus 300 ~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~--~ia~~~gl~ 358 (658)
...+|.|||+... ..+-|++.++|++|+++|++++++|..+...+. .....+|+.
T Consensus 10 ~~~~D~dG~l~~~----~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~ 66 (242)
T TIGR01459 10 VFLLDLWGVIIDG----NHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGIN 66 (242)
T ss_pred EEEEecccccccC----CccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCC
Confidence 4578999999873 467899999999999999999999986654433 455677763
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.021 Score=66.47 Aligned_cols=85 Identities=14% Similarity=0.047 Sum_probs=56.7
Q ss_pred ccCcEEEEEeCcc---HHHHHHHhhHHhhh--hhhccC-CeeEEEEcCcccHHHHHHHHHhc---CCCeE-EEEcCCcC-
Q 041225 431 AIASLALIIDGNS---LVYILEKDLESDLF--DLATSC-RVVLCCRVAPLQKAGIVDLIKSR---TDDMT-LAIGDGAN- 499 (658)
Q Consensus 431 ~~~~~~l~~~~~~---~~~~~~~~~~~~~~--~i~~s~-~~~i~~~~~~~~K~~~v~~L~~~---~~~~v-~aiGDg~N- 499 (658)
..+++.+.+.... ....+++.+...-+ .++.++ ...+++.+...+|+.+|+.|..+ +..+| +.+||+.|
T Consensus 906 ~~~k~SY~v~d~~~~~~v~elr~~Lr~~gLr~~~iys~~~~~LDVlP~~ASKgqAlRyL~~rwgi~l~~v~VfaGdSGnt 985 (1050)
T TIGR02468 906 TDHCYAFKVKDPSKVPPVKELRKLLRIQGLRCHAVYCRNGTRLNVIPLLASRSQALRYLFVRWGIELANMAVFVGESGDT 985 (1050)
T ss_pred CCceEEEEecCcccCccHHHHHHHHHhCCCceEEEeecCCcEeeeeeCCCCHHHHHHHHHHHcCCChHHeEEEeccCCCC
Confidence 3455555533332 23444444444332 233443 47899999999999999999988 55666 55999999
Q ss_pred Chh-hhhhcceeEEecC
Q 041225 500 DVS-MIQMADVGVGICG 515 (658)
Q Consensus 500 Di~-Ml~~A~vgIam~~ 515 (658)
|.+ ||.--+-+|-+.|
T Consensus 986 D~e~Ll~G~~~tvi~~g 1002 (1050)
T TIGR02468 986 DYEGLLGGLHKTVILKG 1002 (1050)
T ss_pred CHHHHhCCceeEEEEec
Confidence 966 6667778887755
|
Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. |
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.011 Score=59.72 Aligned_cols=38 Identities=26% Similarity=0.305 Sum_probs=32.7
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSC 355 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~ 355 (658)
++.|++.+.++.|+++|+++.++|+.+...+..+....
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~ 181 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTL 181 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHh
Confidence 57899999999999999999999998887777665544
|
|
| >KOG4383 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.039 Score=59.28 Aligned_cols=137 Identities=15% Similarity=0.312 Sum_probs=93.8
Q ss_pred EEEEcCcccHHHHHHHHHhcCCCeEEEEcCCcCCh--hhhhhcceeEEecCccchh-------------hh---------
Q 041225 467 LCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDV--SMIQMADVGVGICGQEGRQ-------------AV--------- 522 (658)
Q Consensus 467 i~~~~~~~~K~~~v~~L~~~~~~~v~aiGDg~NDi--~Ml~~A~vgIam~~~~~~~-------------~k--------- 522 (658)
++-..+|..--..|+.++++ ++.|++.|-..|-- -.+-.||++||+..-+... ..
T Consensus 971 LFTDcnpeamcEMIeIMQE~-GEVtcclGS~aN~rNSciflkadISialD~l~~~~C~~e~fg~assismaqandglspl 1049 (1354)
T KOG4383|consen 971 LFTDCNPEAMCEMIEIMQEN-GEVTCCLGSCANARNSCIFLKADISIALDDLEEPACRLEDFGVASSISMAQANDGLSPL 1049 (1354)
T ss_pred eccCCCHHHHHHHHHHHHHc-CcEEEEeccccccccceEEEccceeEEeccCCCccceecccccchhhhhhhhcCCCCce
Confidence 45666777778889999998 78999999998843 3457799999884322210 01
Q ss_pred --------hhcccccccccchHHHHhh-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHHH
Q 041225 523 --------MASDFAMGQFRFLKRLLLV-HGHWNYQRIGYLVLYNFYRNAVFVLMLFWYILFTGFSTTSALTDWSSVFYSL 593 (658)
Q Consensus 523 --------~~AD~vl~~~~~l~~l~l~-~gr~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~n~ 593 (658)
-+.|+....-..++..-++ -.|.....+++.++|.++..+.+..++|...++ .-+..++.-.++|.+.
T Consensus 1050 QiSgqLnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFiLq~qL~l~Vi~flSc~~---~LP~i~s~sdii~lSc 1126 (1354)
T KOG4383|consen 1050 QISGQLNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFILQAQLLLSVIIFLSCFF---FLPIIFSHSDIILLSC 1126 (1354)
T ss_pred eecccccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHH---hccchhccchHHHHHH
Confidence 1223333333445555555 578888889999999999999888888877776 4456677777777653
Q ss_pred HHhhhhhhhhe-ecccC
Q 041225 594 LYTSVPTIVVG-IVDKD 609 (658)
Q Consensus 594 ~~~~~p~~~~~-~~~~~ 609 (658)
+ ..|.++++ ++.+.
T Consensus 1127 f--c~PlL~i~tL~gk~ 1141 (1354)
T KOG4383|consen 1127 F--CIPLLFIGTLFGKF 1141 (1354)
T ss_pred H--HHHHHHHHHHhcCC
Confidence 3 46777777 44443
|
|
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.014 Score=56.69 Aligned_cols=41 Identities=20% Similarity=0.169 Sum_probs=35.9
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
.+.|++.+.++.|+++|++++++|+.+...+.......|+.
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~ 133 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLD 133 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcH
Confidence 67899999999999999999999998888887777777763
|
|
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.0073 Score=57.53 Aligned_cols=43 Identities=21% Similarity=0.141 Sum_probs=37.6
Q ss_pred ccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 316 EDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 316 ~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
..++.+...++++.|+++|+++.++||.+...+..+.+..|+.
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~ 146 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLE 146 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCch
Confidence 3356667799999999999999999999999999999998874
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.0036 Score=61.74 Aligned_cols=60 Identities=18% Similarity=0.224 Sum_probs=48.5
Q ss_pred HhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHH---cCccCCCccE
Q 041225 301 ALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALS---CKLLTPDMQQ 364 (658)
Q Consensus 301 ~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~---~gl~~~~~~~ 364 (658)
+.+|+||||+.. +.+.|++.++|++|+++|++++++|||+..+...++++ +|+-...+++
T Consensus 4 v~~DlDGtL~~~----~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~~~~~~i 66 (248)
T PRK10444 4 VICDIDGVLMHD----NVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVDVPDSVF 66 (248)
T ss_pred EEEeCCCceEeC----CeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCHhhE
Confidence 468999999984 47889999999999999999999999999888777665 4664333333
|
|
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=96.36 E-value=0.023 Score=52.40 Aligned_cols=52 Identities=17% Similarity=0.224 Sum_probs=41.7
Q ss_pred ceeeeccccccccCCChHHHHHHHHhcCCeEEEEecC-ChhHHHHHHHHcCcc
Q 041225 307 LTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGD-KQDTAISIALSCKLL 358 (658)
Q Consensus 307 gTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr-~~~~a~~ia~~~gl~ 358 (658)
|......+-+-++.|++.+.++.|+++|+++.++|+. ....+..+....++.
T Consensus 34 ~~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~ 86 (174)
T TIGR01685 34 SIIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEIT 86 (174)
T ss_pred CeEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcC
Confidence 3444444444568899999999999999999999987 888888888888763
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.015 Score=55.46 Aligned_cols=41 Identities=20% Similarity=0.297 Sum_probs=36.6
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
++.|++.++|++|+++|++++++|+-+...+..+...+|+.
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~ 132 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLD 132 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCCh
Confidence 46799999999999999999999999988888888888863
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.019 Score=60.67 Aligned_cols=40 Identities=13% Similarity=0.124 Sum_probs=33.7
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHH-HcCc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIAL-SCKL 357 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~-~~gl 357 (658)
++.|++.+.++.|+++|++++|+|+.....+..... ..|+
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl 133 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGW 133 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccCh
Confidence 567999999999999999999999998887776554 4555
|
|
| >PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5 | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.013 Score=55.07 Aligned_cols=58 Identities=16% Similarity=0.192 Sum_probs=46.1
Q ss_pred hccCCeeEEEEcCcccHHHHHHHHHhcCCCeEEEEcC----CcCChhhhhhcc-eeEEecCcc
Q 041225 460 ATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGD----GANDVSMIQMAD-VGVGICGQE 517 (658)
Q Consensus 460 ~~s~~~~i~~~~~~~~K~~~v~~L~~~~~~~v~aiGD----g~NDi~Ml~~A~-vgIam~~~~ 517 (658)
..-+...+++.+.|.+|..+++.|.+...+++..||| |.||-|.+...+ +|+++.+-+
T Consensus 147 siGGqiSiDvfp~GwDKty~Lr~l~~~~~~~I~FfGDkt~pGGNDyei~~~~rt~g~~V~~p~ 209 (220)
T PF03332_consen 147 SIGGQISIDVFPKGWDKTYCLRHLEDEGFDEIHFFGDKTFPGGNDYEIFEDPRTIGHTVTSPE 209 (220)
T ss_dssp EEETTTEEEEEETT-SGGGGGGGTTTTT-SEEEEEESS-STTSTTHHHHHSTTSEEEE-SSHH
T ss_pred ecCCceEEccccCCccHHHHHHHHHhcccceEEEEehhccCCCCCceeeecCCccEEEeCCHH
Confidence 3445678999999999999999999865689999999 899999998765 588885443
|
4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A. |
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.01 Score=49.59 Aligned_cols=60 Identities=23% Similarity=0.261 Sum_probs=43.1
Q ss_pred hhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHH---HHHHHHcCccCCCccEE
Q 041225 302 LIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTA---ISIALSCKLLTPDMQQI 365 (658)
Q Consensus 302 ~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a---~~ia~~~gl~~~~~~~i 365 (658)
.+|+||+|.. .+.+-|++.++|+.|+++|++++++|-.+..+. ..-...+|+....++++
T Consensus 2 l~D~dGvl~~----g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~~~~~i~ 64 (101)
T PF13344_consen 2 LFDLDGVLYN----GNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPVDEDEII 64 (101)
T ss_dssp EEESTTTSEE----TTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT--GGGEE
T ss_pred EEeCccEeEe----CCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCCCcCEEE
Confidence 4799999997 457889999999999999999999998775443 33346778765444443
|
... |
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.012 Score=54.41 Aligned_cols=43 Identities=19% Similarity=0.236 Sum_probs=39.0
Q ss_pred ccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 316 EDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 316 ~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
..++.+++.+.+++|+++|++++++|+.+...+....+.+|+.
T Consensus 75 ~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~ 117 (176)
T PF13419_consen 75 KLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLD 117 (176)
T ss_dssp GEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHG
T ss_pred ccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccc
Confidence 3378899999999999999999999999999999999998875
|
... |
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.019 Score=51.67 Aligned_cols=43 Identities=14% Similarity=0.247 Sum_probs=36.0
Q ss_pred EcCcccHHHHHHHHHhcCCCeEEEEcCCcCChhhhhhcceeEEe
Q 041225 470 RVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGI 513 (658)
Q Consensus 470 ~~~~~~K~~~v~~L~~~~~~~v~aiGDg~NDi~Ml~~A~vgIam 513 (658)
.+-|.+|+..|+.+++. .+.+..+|||.-|+++=+.+++=+|=
T Consensus 142 s~fG~dK~~vI~~l~e~-~e~~fy~GDsvsDlsaaklsDllFAK 184 (220)
T COG4359 142 SQFGHDKSSVIHELSEP-NESIFYCGDSVSDLSAAKLSDLLFAK 184 (220)
T ss_pred cccCCCcchhHHHhhcC-CceEEEecCCcccccHhhhhhhHhhH
Confidence 55688999999999997 67899999999999987777765543
|
|
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=96.05 E-value=0.016 Score=54.36 Aligned_cols=39 Identities=21% Similarity=0.261 Sum_probs=33.3
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
.+.|++.++|+.|+++|++++++|+. ..+..+.+..|+.
T Consensus 88 ~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~ 126 (185)
T TIGR02009 88 EVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLT 126 (185)
T ss_pred CCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChH
Confidence 68899999999999999999999998 5566677777763
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.029 Score=52.42 Aligned_cols=40 Identities=33% Similarity=0.355 Sum_probs=33.1
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
++.|++.+.++.|+++|++++++|+..... ..+..++|+.
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~ 124 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLR 124 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCH
Confidence 678999999999999999999999988777 5444446663
|
HAD subfamilies caused by an overly broad single model. |
| >PLN02177 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=96.03 E-value=0.049 Score=59.06 Aligned_cols=71 Identities=13% Similarity=0.104 Sum_probs=50.1
Q ss_pred CcccHHHHHHHHHhcCCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhcccccccccchHHHHhhhhhhHHHHHH
Q 041225 472 APLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLVHGHWNYQRIG 551 (658)
Q Consensus 472 ~~~~K~~~v~~L~~~~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~~gr~~~~~~~ 551 (658)
.+..|...++.....+... .+.||+.||.+||+.|+.++++.... . --++...+.+.+++..||..++-.-
T Consensus 173 ~Ge~Kv~rl~~~~g~~~~~-~aYgDS~sD~plL~~a~e~y~V~~~~------~--~~~~~~~~~~~~~fhdgrl~~~p~~ 243 (497)
T PLN02177 173 VGDHKRDAVLKEFGDALPD-LGLGDRETDHDFMSICKEGYMVPRTK------C--EPLPRNKLLSPVIFHEGRLVQRPTP 243 (497)
T ss_pred ccHHHHHHHHHHhCCCCce-EEEECCccHHHHHHhCCccEEeCCCC------C--CcCCcccCCCceeeeCCcccCCCCH
Confidence 4567888887443322223 89999999999999999999993311 1 1156667777787778998877543
|
|
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.02 Score=53.71 Aligned_cols=38 Identities=18% Similarity=0.334 Sum_probs=30.5
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKL 357 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl 357 (658)
.+.|++.++|+.|+++|+++.++|+... +....+..|+
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l 124 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGL 124 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCc
Confidence 5779999999999999999999998643 3455666665
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.84 E-value=0.069 Score=51.89 Aligned_cols=40 Identities=20% Similarity=0.155 Sum_probs=34.0
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
++.|++.++++.|+ +|++++++|+.....+.......|+.
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~ 134 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLR 134 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChH
Confidence 47799999999999 68999999998888777777777763
|
|
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=95.63 E-value=0.018 Score=58.18 Aligned_cols=61 Identities=18% Similarity=0.260 Sum_probs=45.2
Q ss_pred HHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHH---HHHHcCccCCCccE
Q 041225 300 AALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAIS---IALSCKLLTPDMQQ 364 (658)
Q Consensus 300 ~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~---ia~~~gl~~~~~~~ 364 (658)
.+++|+||||+.. +..-+++.++|++|+++|++++++||++..+... -.+.+|+....+++
T Consensus 4 ~~~~D~DGtl~~~----~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~~~~~i 67 (279)
T TIGR01452 4 GFIFDCDGVLWLG----ERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNGLAEQL 67 (279)
T ss_pred EEEEeCCCceEcC----CeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhE
Confidence 3568999999884 3456779999999999999999999987544333 34567775443333
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.57 E-value=0.043 Score=50.51 Aligned_cols=44 Identities=32% Similarity=0.371 Sum_probs=36.0
Q ss_pred HHHhhhccceeeeccc-ccc-----ccCCChHHHHHHHHhcCCeEEEEec
Q 041225 299 TAALIECDLTLLGATG-IED-----KLQDGVPEAIEALRQAGIKVWVLTG 342 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~-~~d-----~l~~~~~~aI~~l~~~GI~v~i~TG 342 (658)
.++|+|.|||+.-..+ .-+ .+.+++.+++..++++|.+++|+|-
T Consensus 6 k~lflDRDGtin~d~~~yv~~~~~~~~~~g~i~al~~l~~~gy~lVvvTN 55 (181)
T COG0241 6 KALFLDRDGTINIDKGDYVDSLDDFQFIPGVIPALLKLQRAGYKLVVVTN 55 (181)
T ss_pred cEEEEcCCCceecCCCcccCcHHHhccCccHHHHHHHHHhCCCeEEEEEC
Confidence 5679999999986543 111 3579999999999999999999996
|
|
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=95.55 E-value=0.26 Score=46.13 Aligned_cols=60 Identities=27% Similarity=0.261 Sum_probs=45.7
Q ss_pred cccHHHHHHHHHhc--CCCeEEEEcCCcCChhhhhhcc----eeEEecCccchhhhhhcccccccccc
Q 041225 473 PLQKAGIVDLIKSR--TDDMTLAIGDGANDVSMIQMAD----VGVGICGQEGRQAVMASDFAMGQFRF 534 (658)
Q Consensus 473 ~~~K~~~v~~L~~~--~~~~v~aiGDg~NDi~Ml~~A~----vgIam~~~~~~~~k~~AD~vl~~~~~ 534 (658)
+..|+.+++.+++. .....+++|||..|+.||+.+. +.||..||+- +...||+.+.+-..
T Consensus 189 gg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGNeY--al~eAdVAvisp~~ 254 (315)
T COG4030 189 GGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGNEY--ALKEADVAVISPTA 254 (315)
T ss_pred CcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecCCcc--cccccceEEeccch
Confidence 46789999999987 2233799999999999999873 5566666665 78888987655544
|
|
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=95.34 E-value=0.045 Score=53.13 Aligned_cols=41 Identities=22% Similarity=0.353 Sum_probs=36.3
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccC
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLT 359 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~ 359 (658)
++.|++.+.+++|+++ ++++++|+.....+..+.+..|+..
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~ 137 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFP 137 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHh
Confidence 5788999999999999 9999999999888888888888743
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=95.29 E-value=0.049 Score=52.82 Aligned_cols=31 Identities=23% Similarity=0.379 Sum_probs=27.3
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHH
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTA 348 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a 348 (658)
++.|++.+.|+.|+++|++++++||-.....
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~ 108 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHF 108 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhH
Confidence 5779999999999999999999999876543
|
|
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=95.19 E-value=0.083 Score=50.41 Aligned_cols=39 Identities=13% Similarity=0.167 Sum_probs=31.2
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKL 357 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl 357 (658)
.+-|++.++++.|+++|++++++|+-.. .+......+|+
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~-~~~~~l~~~~l 143 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDS-RLRGLLEALGL 143 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCch-hHHHHHHHCCc
Confidence 5778999999999999999999998654 34555666665
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=95.18 E-value=0.085 Score=48.12 Aligned_cols=55 Identities=18% Similarity=0.227 Sum_probs=45.2
Q ss_pred HhhhccceeeeccccccccCCChHHHHHHHHhcCCe--EEEEecC-------ChhHHHHHHHHcCc
Q 041225 301 ALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIK--VWVLTGD-------KQDTAISIALSCKL 357 (658)
Q Consensus 301 ~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~--v~i~TGr-------~~~~a~~ia~~~gl 357 (658)
+.+|.|.||... =++++.++..+.+++|++.+.. ++|+|-. ....|..+.+.+|+
T Consensus 44 li~DkDNTL~~~--~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgI 107 (168)
T PF09419_consen 44 LIFDKDNTLTPP--YEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGI 107 (168)
T ss_pred EEEcCCCCCCCC--CcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCC
Confidence 346899999865 2678999999999999999874 9999886 36778888888886
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=95.11 E-value=0.064 Score=48.62 Aligned_cols=38 Identities=16% Similarity=0.284 Sum_probs=32.5
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSC 355 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~ 355 (658)
...+++.+.++.|+++|++++++|+.....+....+..
T Consensus 64 ~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~ 101 (154)
T TIGR01549 64 AYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH 101 (154)
T ss_pred eeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH
Confidence 45588999999999999999999999988877766553
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=94.88 E-value=0.13 Score=49.54 Aligned_cols=37 Identities=24% Similarity=0.257 Sum_probs=31.7
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHH
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALS 354 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~ 354 (658)
++.+++.++|++|+++|+++.++|..+......+...
T Consensus 95 ~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~ 131 (220)
T TIGR01691 95 HLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGH 131 (220)
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhh
Confidence 6889999999999999999999999887766655444
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | Back alignment and domain information |
|---|
Probab=94.73 E-value=0.063 Score=58.48 Aligned_cols=47 Identities=19% Similarity=0.318 Sum_probs=37.1
Q ss_pred HHHhhhccceeeeccc----ccc-----ccCCChHHHHHHHHhcCCeEEEEecCCh
Q 041225 299 TAALIECDLTLLGATG----IED-----KLQDGVPEAIEALRQAGIKVWVLTGDKQ 345 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~----~~d-----~l~~~~~~aI~~l~~~GI~v~i~TGr~~ 345 (658)
++.++|.||||+.... ..+ -+-|++.++|++|+++|++++|+|.-+.
T Consensus 169 Kia~fD~DGTLi~t~sg~~~~~~~~d~~~l~pgV~e~L~~L~~~Gy~IvIvTNQ~g 224 (526)
T TIGR01663 169 KIAGFDLDGTIIKTKSGKVFPKGPDDWQIIFPEIPEKLKELEADGFKICIFTNQGG 224 (526)
T ss_pred cEEEEECCCCccccCCCccCCCCHHHeeecccCHHHHHHHHHHCCCEEEEEECCcc
Confidence 5678999999996432 011 1469999999999999999999998544
|
Note that the EC number for the kinase function is: 2.7.1.78 |
| >TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA | Back alignment and domain information |
|---|
Probab=94.54 E-value=0.054 Score=53.13 Aligned_cols=53 Identities=26% Similarity=0.218 Sum_probs=43.5
Q ss_pred hhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEe---cCChhHHHHHHHH-cCcc
Q 041225 302 LIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLT---GDKQDTAISIALS-CKLL 358 (658)
Q Consensus 302 ~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~T---Gr~~~~a~~ia~~-~gl~ 358 (658)
.+|+||||+.. +.+-+++.++|+.++++|++++++| ||+.........+ .|+-
T Consensus 2 lfD~DGvL~~~----~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~ 58 (236)
T TIGR01460 2 LFDIDGVLWLG----HKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVD 58 (236)
T ss_pred EEeCcCccCcC----CccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCC
Confidence 47999999985 3455699999999999999999998 8888877666566 6763
|
Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant. |
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=93.30 E-value=0.33 Score=58.22 Aligned_cols=41 Identities=20% Similarity=0.093 Sum_probs=36.7
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
.+-|++.+.++.|+++|++++|+|+.....+..+.+..|+.
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~ 201 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLP 201 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCC
Confidence 36789999999999999999999999999888888888873
|
|
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=92.99 E-value=0.3 Score=47.35 Aligned_cols=43 Identities=16% Similarity=0.183 Sum_probs=38.0
Q ss_pred ccCCChHHHHHHH--HhcCCeEEEEecCChhHHHHHHHHcCccCC
Q 041225 318 KLQDGVPEAIEAL--RQAGIKVWVLTGDKQDTAISIALSCKLLTP 360 (658)
Q Consensus 318 ~l~~~~~~aI~~l--~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~ 360 (658)
++.|+..++++.+ .+.|+.+.|+|--+..-+..+.+.-|+...
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~ 115 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDC 115 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccc
Confidence 7889999999999 568999999999999999999999888543
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=92.81 E-value=0.24 Score=47.53 Aligned_cols=28 Identities=32% Similarity=0.424 Sum_probs=25.1
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCCh
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQ 345 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~ 345 (658)
++.|++.+.++.|+++|++++++|....
T Consensus 94 ~~~~~~~~~L~~L~~~g~~l~i~Sn~~~ 121 (211)
T TIGR02247 94 KLRPSMMAAIKTLRAKGFKTACITNNFP 121 (211)
T ss_pred ccChhHHHHHHHHHHCCCeEEEEeCCCC
Confidence 5778999999999999999999998654
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=92.56 E-value=1.1 Score=41.98 Aligned_cols=40 Identities=10% Similarity=0.149 Sum_probs=35.4
Q ss_pred ccCCChHHHHHHHHhcCC-eEEEEecCChhHHHHHHHHcCc
Q 041225 318 KLQDGVPEAIEALRQAGI-KVWVLTGDKQDTAISIALSCKL 357 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI-~v~i~TGr~~~~a~~ia~~~gl 357 (658)
++.|+..++|+.+++.|. .++|+|--+.--+..+.+..|+
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~ 124 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGI 124 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccH
Confidence 789999999999999997 8899998888888888877776
|
|
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=92.29 E-value=0.43 Score=46.41 Aligned_cols=29 Identities=28% Similarity=0.423 Sum_probs=26.0
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChh
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQD 346 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~ 346 (658)
+.-|++.+.++.++++|++|+++|||+..
T Consensus 115 ~aip~a~~l~~~~~~~G~~V~~iT~R~~~ 143 (229)
T PF03767_consen 115 PAIPGALELYNYARSRGVKVFFITGRPES 143 (229)
T ss_dssp EEETTHHHHHHHHHHTTEEEEEEEEEETT
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCch
Confidence 55577999999999999999999999875
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >TIGR02251 HIF-SF_euk Dullard-like phosphatase domain | Back alignment and domain information |
|---|
Probab=92.04 E-value=0.14 Score=46.94 Aligned_cols=39 Identities=13% Similarity=0.036 Sum_probs=35.2
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKL 357 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl 357 (658)
..||++.+.++.|.+. ..+++.|.-....|..+...++.
T Consensus 42 ~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp 80 (162)
T TIGR02251 42 FKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDR 80 (162)
T ss_pred EECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCc
Confidence 3789999999999987 99999999999999999888775
|
This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031. |
| >KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=91.61 E-value=0.32 Score=44.61 Aligned_cols=53 Identities=15% Similarity=0.186 Sum_probs=43.0
Q ss_pred ccCCeeEEEEcCcccHHHHHHHHHhcCCCeEEEEcC----CcCChhhhhhc-ceeEEe
Q 041225 461 TSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGD----GANDVSMIQMA-DVGVGI 513 (658)
Q Consensus 461 ~s~~~~i~~~~~~~~K~~~v~~L~~~~~~~v~aiGD----g~NDi~Ml~~A-~vgIam 513 (658)
..+...+++-+++=+|-.-++.+.+.+-+++-.||| |.||-+.+..- -+|.++
T Consensus 179 IGGQISfDvFP~GWDKtyCLqhle~dgf~~IhFFGDkT~~GGNDyEIf~dprtiGhsV 236 (252)
T KOG3189|consen 179 IGGQISFDVFPKGWDKTYCLQHLEKDGFDTIHFFGDKTMPGGNDYEIFADPRTIGHSV 236 (252)
T ss_pred ECCeEEEeecCCCcchhHHHHHhhhcCCceEEEeccccCCCCCcceeeeCCccccccc
Confidence 344567889999999999999999887789999999 88999988543 255555
|
|
| >COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=91.48 E-value=0.23 Score=49.08 Aligned_cols=49 Identities=27% Similarity=0.335 Sum_probs=40.8
Q ss_pred HHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHH
Q 041225 300 AALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIA 352 (658)
Q Consensus 300 ~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia 352 (658)
...+|+|||+.. .+..-|++.++|++|+++|++++++|-.+..+...++
T Consensus 10 ~~l~DlDGvl~~----G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~ 58 (269)
T COG0647 10 GFLFDLDGVLYR----GNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVA 58 (269)
T ss_pred EEEEcCcCceEe----CCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHH
Confidence 457899999996 4578899999999999999999999987766655333
|
|
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=91.30 E-value=1.2 Score=42.17 Aligned_cols=38 Identities=18% Similarity=0.202 Sum_probs=28.0
Q ss_pred HHHHHHHHHhc-CCCeEEEEcCCcCChhhhhhc--ceeE-Ee
Q 041225 476 KAGIVDLIKSR-TDDMTLAIGDGANDVSMIQMA--DVGV-GI 513 (658)
Q Consensus 476 K~~~v~~L~~~-~~~~v~aiGDg~NDi~Ml~~A--~vgI-am 513 (658)
|-..+..+.+. +++.+++|||+.+|+.+=+.| |+-+ ++
T Consensus 132 kp~~~~~a~~~~~~~~~v~vgDs~~di~aA~~a~~Gi~~i~~ 173 (197)
T PHA02597 132 KEKLFIKAKEKYGDRVVCFVDDLAHNLDAAHEALSQLPVIHM 173 (197)
T ss_pred cHHHHHHHHHHhCCCcEEEeCCCHHHHHHHHHHHcCCcEEEe
Confidence 44455544443 456799999999999999999 9875 44
|
2 hypothetical protein; Provisional |
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=90.52 E-value=0.73 Score=43.76 Aligned_cols=31 Identities=26% Similarity=0.347 Sum_probs=26.9
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHH
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTA 348 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a 348 (658)
++.|++.++++.|+++|+++.++|.-+....
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~ 114 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHT 114 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhH
Confidence 4678999999999999999999999875543
|
|
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=90.19 E-value=0.42 Score=46.26 Aligned_cols=38 Identities=11% Similarity=0.128 Sum_probs=31.2
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
++-+++.++|+.| ++++.++|+.+...+....+..|+.
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~ 125 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGML 125 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChH
Confidence 5678999999988 5999999999887777777777763
|
|
| >PTZ00445 p36-lilke protein; Provisional | Back alignment and domain information |
|---|
Probab=89.89 E-value=0.64 Score=43.71 Aligned_cols=49 Identities=20% Similarity=0.250 Sum_probs=36.4
Q ss_pred HHHhhhccceeee--ccccccc----------cCCChHHHHHHHHhcCCeEEEEecCChhH
Q 041225 299 TAALIECDLTLLG--ATGIEDK----------LQDGVPEAIEALRQAGIKVWVLTGDKQDT 347 (658)
Q Consensus 299 ~~~~~d~DgTllg--~~~~~d~----------l~~~~~~aI~~l~~~GI~v~i~TGr~~~~ 347 (658)
.++.+|.|.|+++ +-|-.++ ++|+.+.-+++|+++||+++++|=-....
T Consensus 44 k~Va~D~DnTlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l~~~~I~v~VVTfSd~~~ 104 (219)
T PTZ00445 44 KVIASDFDLTMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRLKNSNIKISVVTFSDKEL 104 (219)
T ss_pred eEEEecchhhhhhhhcccccCCCcchhhhhccCCHHHHHHHHHHHHCCCeEEEEEccchhh
Confidence 3455788899888 1122333 68899999999999999999999655433
|
|
| >TIGR01680 Veg_Stor_Prot vegetative storage protein | Back alignment and domain information |
|---|
Probab=89.61 E-value=2 Score=42.35 Aligned_cols=30 Identities=20% Similarity=0.254 Sum_probs=25.4
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhH
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDT 347 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~ 347 (658)
+.-|.+.+..+.+++.|++|+++|||....
T Consensus 145 pAlp~al~ly~~l~~~G~kIf~VSgR~e~~ 174 (275)
T TIGR01680 145 PALPETLKNYNKLVSLGFKIIFLSGRLKDK 174 (275)
T ss_pred CCChHHHHHHHHHHHCCCEEEEEeCCchhH
Confidence 445688889999999999999999998643
|
The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. |
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=88.09 E-value=1.4 Score=41.18 Aligned_cols=35 Identities=20% Similarity=0.118 Sum_probs=30.0
Q ss_pred hHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 323 VPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 323 ~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
..+.+..|++. +++.++||.+...+....+..|+.
T Consensus 92 ~~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~ 126 (188)
T PRK10725 92 LIEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLR 126 (188)
T ss_pred HHHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcH
Confidence 46899999865 899999999999999888888874
|
|
| >PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin [] | Back alignment and domain information |
|---|
Probab=87.88 E-value=0.43 Score=43.47 Aligned_cols=42 Identities=36% Similarity=0.582 Sum_probs=31.5
Q ss_pred Hhhhccceeeecccc-------cc-c-cCCChHHHHHHHHhcCCeEEEEec
Q 041225 301 ALIECDLTLLGATGI-------ED-K-LQDGVPEAIEALRQAGIKVWVLTG 342 (658)
Q Consensus 301 ~~~d~DgTllg~~~~-------~d-~-l~~~~~~aI~~l~~~GI~v~i~TG 342 (658)
.++|+||||+-.-.- +| + +.+++.++|++|.+.|.+++|+|-
T Consensus 3 a~fD~DgTLi~~~s~~~f~~~~~D~~~~~~~v~~~L~~l~~~Gy~IvIvTN 53 (159)
T PF08645_consen 3 AFFDLDGTLIKTKSGKKFPKDPDDWKFFPPGVPEALRELHKKGYKIVIVTN 53 (159)
T ss_dssp EEE-SCTTTEE-STSTTS-SSTCGGEEC-TTHHHHHHHHHHTTEEEEEEEE
T ss_pred EEEeCCCCccCCCCCCcCcCCHHHhhhcchhHHHHHHHHHhcCCeEEEEeC
Confidence 368999999987432 22 2 356899999999999999999995
|
; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A .... |
| >COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Probab=87.78 E-value=0.94 Score=43.87 Aligned_cols=43 Identities=28% Similarity=0.291 Sum_probs=39.4
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCC
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTP 360 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~ 360 (658)
++.+++.+.++.|+++|+.++++|+.+...+..+....|+...
T Consensus 86 ~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~ 128 (221)
T COG0637 86 KPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDY 128 (221)
T ss_pred CCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhh
Confidence 6889999999999999999999999999999999999998543
|
|
| >PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=85.77 E-value=0.74 Score=42.96 Aligned_cols=39 Identities=15% Similarity=0.308 Sum_probs=26.7
Q ss_pred ccchhhHHHHHHHHHHhhhhhhhheecccCCChHHHhhCCc
Q 041225 580 TSALTDWSSVFYSLLYTSVPTIVVGIVDKDLSHKTLMQYPK 620 (658)
Q Consensus 580 ~~~~~~~~~~~~n~~~~~~p~~~~~~~~~~~~~~~~~~~p~ 620 (658)
+.|+++.|++|+|++.+.+|+++++... .+++.+.+.|.
T Consensus 1 P~Pl~~~qiL~inli~d~~~a~al~~e~--~~~~im~r~Pr 39 (182)
T PF00689_consen 1 PLPLTPIQILWINLITDLLPALALGFEP--PDPDIMKRPPR 39 (182)
T ss_dssp S-SS-HHHHHHHHHTTTHHHHHHGGGSS---STTGGGS---
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHhcCc--chhhhhhcccc
Confidence 4688999999999999999999997533 34455555554
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A .... |
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=85.48 E-value=2.9 Score=38.94 Aligned_cols=38 Identities=11% Similarity=-0.001 Sum_probs=31.8
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
++.+++.+++++|+ .+++++|+.+...+..+.+..|+.
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~ 121 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIE 121 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcH
Confidence 46688899999987 478999999988888888888874
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5 | Back alignment and domain information |
|---|
Probab=83.57 E-value=1.3 Score=45.56 Aligned_cols=56 Identities=20% Similarity=0.177 Sum_probs=42.7
Q ss_pred HhhhccceeeeccccccccCCChHHHHHHHHhc----CCeEEEEecC---ChhH-HHHHHHHcCccCC
Q 041225 301 ALIECDLTLLGATGIEDKLQDGVPEAIEALRQA----GIKVWVLTGD---KQDT-AISIALSCKLLTP 360 (658)
Q Consensus 301 ~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~----GI~v~i~TGr---~~~~-a~~ia~~~gl~~~ 360 (658)
+.+|+||||... +++-+++.++++.|+++ |+++.++|-. +... +..+.+.+|+-..
T Consensus 3 ~ifD~DGvL~~g----~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~~~ 66 (321)
T TIGR01456 3 FAFDIDGVLFRG----KKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVDVS 66 (321)
T ss_pred EEEeCcCceECC----ccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCCCC
Confidence 358999999974 46689999999999999 9999999844 3444 4445577887433
|
The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog. |
| >PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway | Back alignment and domain information |
|---|
Probab=81.34 E-value=14 Score=38.09 Aligned_cols=49 Identities=24% Similarity=0.232 Sum_probs=37.2
Q ss_pred HHhhhccceeeecccccccc--CCChHHHHHHHHhcCCeEEEEecCChhHHHHH
Q 041225 300 AALIECDLTLLGATGIEDKL--QDGVPEAIEALRQAGIKVWVLTGDKQDTAISI 351 (658)
Q Consensus 300 ~~~~d~DgTllg~~~~~d~l--~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~i 351 (658)
.+-+|-|+||...-+ .+ ...+..-|-+|.++|++|.|+|.=.+..+...
T Consensus 149 LvTFDgDvTLY~DG~---sl~~d~pvi~~ii~LL~~gv~VgIVTAAGY~~a~kY 199 (408)
T PF06437_consen 149 LVTFDGDVTLYEDGA---SLEPDNPVIPRIIKLLRRGVKVGIVTAAGYPGAEKY 199 (408)
T ss_pred EEEEcCCcccccCCC---CCCCCchHHHHHHHHHhcCCeEEEEeCCCCCChHHH
Confidence 345889999997633 44 45667778888999999999999887766444
|
; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process |
| >COG3700 AphA Acid phosphatase (class B) [General function prediction only] | Back alignment and domain information |
|---|
Probab=81.26 E-value=5.2 Score=36.21 Aligned_cols=31 Identities=26% Similarity=0.565 Sum_probs=23.5
Q ss_pred HHHHhcCCCeEEEEcCCcCChhhhhhcce-eEEe
Q 041225 481 DLIKSRTDDMTLAIGDGANDVSMIQMADV-GVGI 513 (658)
Q Consensus 481 ~~L~~~~~~~v~aiGDg~NDi~Ml~~A~v-gIam 513 (658)
.+++++ ..-+.-||+.||+-+-+.||+ ||-+
T Consensus 179 ~~i~~~--~~~IhYGDSD~Di~AAkeaG~RgIRi 210 (237)
T COG3700 179 QWIQDK--NIRIHYGDSDNDITAAKEAGARGIRI 210 (237)
T ss_pred HHHHhc--CceEEecCCchhhhHHHhcCccceeE
Confidence 344544 567899999999999999986 5643
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 658 | ||||
| 2dqs_A | 995 | Crystal Structure Of The Calcium Pump With Amppcp I | 5e-06 | ||
| 2dqs_A | 995 | Crystal Structure Of The Calcium Pump With Amppcp I | 2e-04 | ||
| 1kju_A | 994 | Ca2+-Atpase In The E2 State Length = 994 | 5e-06 | ||
| 1kju_A | 994 | Ca2+-Atpase In The E2 State Length = 994 | 2e-04 | ||
| 3tlm_A | 992 | Crystal Structure Of Endoplasmic Reticulum Ca2+-Atp | 1e-05 | ||
| 3tlm_A | 992 | Crystal Structure Of Endoplasmic Reticulum Ca2+-Atp | 2e-04 | ||
| 3ba6_A | 994 | Structure Of The Ca2e1p Phosphoenzyme Intermediate | 2e-05 | ||
| 3ba6_A | 994 | Structure Of The Ca2e1p Phosphoenzyme Intermediate | 2e-04 | ||
| 2zxe_A | 1028 | Crystal Structure Of The Sodium - Potassium Pump In | 9e-05 | ||
| 3n23_A | 992 | Crystal Structure Of The High Affinity Complex Betw | 2e-04 | ||
| 3b8e_A | 998 | Crystal Structure Of The Sodium-Potassium Pump Leng | 2e-04 | ||
| 3ixz_A | 1034 | Pig Gastric H+K+-Atpase Complexed With Aluminium Fl | 4e-04 |
| >pdb|2DQS|A Chain A, Crystal Structure Of The Calcium Pump With Amppcp In The Absence Of Calcium Length = 995 | Back alignment and structure |
|
| >pdb|2DQS|A Chain A, Crystal Structure Of The Calcium Pump With Amppcp In The Absence Of Calcium Length = 995 | Back alignment and structure |
|
| >pdb|1KJU|A Chain A, Ca2+-Atpase In The E2 State Length = 994 | Back alignment and structure |
|
| >pdb|1KJU|A Chain A, Ca2+-Atpase In The E2 State Length = 994 | Back alignment and structure |
|
| >pdb|3TLM|A Chain A, Crystal Structure Of Endoplasmic Reticulum Ca2+-Atpase (Serca) From Bovine Muscle Length = 992 | Back alignment and structure |
|
| >pdb|3TLM|A Chain A, Crystal Structure Of Endoplasmic Reticulum Ca2+-Atpase (Serca) From Bovine Muscle Length = 992 | Back alignment and structure |
|
| >pdb|3BA6|A Chain A, Structure Of The Ca2e1p Phosphoenzyme Intermediate Of The Serca Ca2+-Atpase Length = 994 | Back alignment and structure |
|
| >pdb|3BA6|A Chain A, Structure Of The Ca2e1p Phosphoenzyme Intermediate Of The Serca Ca2+-Atpase Length = 994 | Back alignment and structure |
|
| >pdb|2ZXE|A Chain A, Crystal Structure Of The Sodium - Potassium Pump In The E2.2k+.Pi State Length = 1028 | Back alignment and structure |
|
| >pdb|3N23|A Chain A, Crystal Structure Of The High Affinity Complex Between Ouabain And The E2p Form Of The Sodium-Potassium Pump Length = 992 | Back alignment and structure |
|
| >pdb|3B8E|A Chain A, Crystal Structure Of The Sodium-Potassium Pump Length = 998 | Back alignment and structure |
|
| >pdb|3IXZ|A Chain A, Pig Gastric H+K+-Atpase Complexed With Aluminium Fluoride Length = 1034 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 658 | |||
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 2e-27 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 9e-27 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 1e-26 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 1e-19 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 3e-04 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 5e-19 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 2e-04 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 1e-12 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 5e-11 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-04 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 4e-09 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 7e-09 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 8e-09 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 1e-08 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 2e-08 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 2e-08 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 4e-08 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 2e-06 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 2e-06 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 5e-06 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 2e-05 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 3e-05 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 6e-05 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 7e-05 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 8e-05 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 8e-05 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 9e-05 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 2e-04 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 2e-04 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 2e-04 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 3e-04 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 6e-04 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 6e-04 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 8e-04 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 8e-04 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 8e-04 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 9e-04 |
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 | Back alignment and structure |
|---|
Score = 117 bits (296), Expect = 2e-27
Identities = 89/506 (17%), Positives = 151/506 (29%), Gaps = 144/506 (28%)
Query: 29 CRTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCGKNYGNSLLLAQQVSAAAVRRWK 88
+ L E LG I SDKTGTLT+N+M + SA
Sbjct: 368 VKNLEAVETLGSTSVICSDKTGTLTQNRMTVSHLWFDNHIH----------SADTTEDQS 417
Query: 89 LKSEISVDSKLMELLSKDLVGDERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENV 148
++ L R+ CN R++ + V
Sbjct: 418 GQTFDQSSETWRALC--------RVLTL--------CN---------RAAFKSGQDAVPV 452
Query: 149 EAIDYQGESPDEQALVSAASAYGYTLFERTSGHIVIDINGEGLRLDVLGLHEFDSVRKRM 208
G+ E AL+ + + ++ + F+S K
Sbjct: 453 PKRIVIGD-ASETALLKFSELTLGN---------AMGYRERFPKVCEI---PFNSTNKFQ 499
Query: 209 SVVIRFPDNSVK---VLVKGA-DSSMFNILAKDSK--RNDLIRHITQSHLS-------EY 255
+ D +++KGA + +L + S + +
Sbjct: 500 LSIHTLEDPRDPRHVLVMKGAPER----VLERCSSILIKGQELPLDEQWREAFQTAYLSL 555
Query: 256 SSQGLRTLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGI 315
G R L L++++ + L+ G +
Sbjct: 556 GGLGERVLGFCQLYLSEKDYPPGYAFDVE--------------AMNFPTSGLSFAGLVSM 601
Query: 316 EDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEEC 375
D + VP+A+ R AGI+V ++TGD TA +IA + I E
Sbjct: 602 IDPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIA----------ASVGIISEGSETV 651
Query: 376 KDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASL 435
+D+ A + + +
Sbjct: 652 EDIAARLRVPVDQVNRKDAR---------------------------------------- 671
Query: 436 ALIIDGNSLVYILEKDL-ESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDD---MT 491
A +I+G L KD+ S+L + + ++ R +P QK IV+ + +T
Sbjct: 672 ACVINGMQL-----KDMDPSELVEALRTHPEMVFARTSPQQKLVIVESCQRL-GAIVAVT 725
Query: 492 LAIGDGANDVSMIQMADVGV--GICG 515
GDG ND ++ AD+GV GI G
Sbjct: 726 ---GDGVNDSPALKKADIGVAMGIAG 748
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 115 bits (290), Expect = 9e-27
Identities = 81/347 (23%), Positives = 128/347 (36%), Gaps = 68/347 (19%)
Query: 30 RTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCGKNYGNSLLLAQ-QVSAAAVRRWK 88
R+L E LG I SDKTGTLT N+M + + K G+ L + ++ + +
Sbjct: 335 RSLPSVETLGCTSVICSDKTGTLTTNQMSVCKMFIIDKVDGDFCSLNEFSITGST---YA 391
Query: 89 LKSEISVDSKLMELLSKDLVGDERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENV 148
+ E+ + K + D E A CN + L+
Sbjct: 392 PEGEVLKNDKPIRSGQFD-------GLVELATICALCN---------------DSSLDFN 429
Query: 149 EAIDY---QGESPDEQALVSAASAYGYTLFERTSGHIVIDINGEGL-------RLDVLGL 198
E GE E AL + E + V N + L
Sbjct: 430 ETKGVYEKVGE-ATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTL-- 486
Query: 199 HEFDSVRKRMSVVIRFPDNSV-----KVLVKGADSSMF----NILAKDSKR--NDLIRHI 247
EF RK MSV +S K+ VKGA + + ++ ++
Sbjct: 487 -EFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEK 545
Query: 248 TQSHLSEYSS--QGLRTLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIEC 305
S + E+ + LR L +A+RD + + + +D+S E
Sbjct: 546 ILSVIKEWGTGRDTLRCLALATRDTPPK---REEMVLDDSSRF------------MEYET 590
Query: 306 DLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIA 352
DLT +G G+ D + V +I+ R AGI+V ++TGD + TAI+I
Sbjct: 591 DLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAIC 637
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 | Back alignment and structure |
|---|
Score = 115 bits (289), Expect = 1e-26
Identities = 92/505 (18%), Positives = 154/505 (30%), Gaps = 142/505 (28%)
Query: 29 CRTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCGKNYGNSLLLAQQVSAAAVRRWK 88
+ L E LG I SDKTGTLT+N+M + + + +
Sbjct: 363 VKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIH--------EADTT---ENQ 411
Query: 89 LKSEISVDSKLMELLSKDLVGDERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENV 148
+ S LS RIAA CN R+ +
Sbjct: 412 SGAAFDKTSATWSALS-------RIAAL--------CN---------RAVFQAGQDNVPI 447
Query: 149 EAIDYQGESPDEQALVSAASAYGYTLFERTSGHIVIDINGEGLRLDVLGLHEFDSVRKRM 208
G+ E AL+ + V + ++ + F+S K
Sbjct: 448 LKRSVAGD-ASESALLKCIELCCGS---------VQGMRDRNPKIVEIP---FNSTNKYQ 494
Query: 209 SVVIRFP---DNSVKVLVKGA-DSSMFNILAKDSK--RNDLIRHITQSHL-------SEY 255
+ ++ +++KGA + IL + S N + + E
Sbjct: 495 LSIHENEKSSESRYLLVMKGAPER----ILDRCSTILLNGAEEPLKEDMKEAFQNAYLEL 550
Query: 256 SSQGLRTLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGI 315
G R L L +++ + D DL +G +
Sbjct: 551 GGLGERVLGFCHFALPEDKYNEGYPFDAD--------------EPNFPTTDLCFVGLMAM 596
Query: 316 EDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEEC 375
D + VP+A+ R AGIKV ++TGD TA +IA +++ + I
Sbjct: 597 IDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETIEDIAARLNIP 656
Query: 376 KDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASL 435
+ A+ V ++++ L + D+ + I
Sbjct: 657 IGQVNPRDAKACVVH------------GSDLKDL---STEVLDDI-----LHYHTEI--- 693
Query: 436 ALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDD---MTL 492
V+ R +P QK IV+ + + +T
Sbjct: 694 ---------VF----------------------ARTSPQQKLIIVEGCQRQ-GAIVAVT- 720
Query: 493 AIGDGANDVSMIQMADVGV--GICG 515
GDG ND ++ AD+GV GI G
Sbjct: 721 --GDGVNDSPALKKADIGVAMGISG 743
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 92.8 bits (231), Expect = 1e-19
Identities = 25/152 (16%), Positives = 50/152 (32%), Gaps = 29/152 (19%)
Query: 201 FDSVRKRMSVVIRFPDNSVKVLVKGADSSMFNILAKDSKRNDLIRHITQSHLSEYSSQGL 260
F+ V KR ++ + + KGA + + + + + I +Y+ +GL
Sbjct: 400 FNPVDKRTALTYIDGSGNWHRVSKGAPEQILELAKASNDLSKKVLSIID----KYAERGL 455
Query: 261 RTLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQ 320
R+L VA + + + +T +G + D +
Sbjct: 456 RSLAVARQVVPE-------------------------KTKESPGAPWEFVGLLPLFDPPR 490
Query: 321 DGVPEAIEALRQAGIKVWVLTGDKQDTAISIA 352
E I G+ V ++TGD+
Sbjct: 491 HDSAETIRRALNLGVNVKMITGDQLAIGKETG 522
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 43.1 bits (102), Expect = 3e-04
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
Query: 36 EDLGQIRYIFSDKTGTLTENKMEFQRASVCGKNYGNS----LLLA 76
E++ + + SDKTGTLT NK+ + V G LL A
Sbjct: 318 EEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLLFA 362
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 | Back alignment and structure |
|---|
Score = 90.8 bits (226), Expect = 5e-19
Identities = 30/201 (14%), Positives = 65/201 (32%), Gaps = 50/201 (24%)
Query: 154 QGESPDEQALVSAASAYGYTLFERTSGHIVIDINGEGLRLDVLGLHE--FDSVRKRMSVV 211
+G ++A + + Y + ++ FD V K++ V
Sbjct: 417 KGIDAIDKAFLKSLKYYPRAKSVLSKYKVL---------------QFHPFDPVSKKVVAV 461
Query: 212 IRFPDNSVKVLVKGADSSMFNILAKDSKRNDLIRHITQSHLSEYSSQGLRTLVVASRDLA 271
+ P VKGA + + +D + + ++ ++E++++G R+L VA +
Sbjct: 462 VESPQGERITCVKGAPLFVLKTVEEDHPIPEEVDQAYKNKVAEFATRGFRSLGVARKR-- 519
Query: 272 DEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALR 331
E +LG D + + + +
Sbjct: 520 -------------------------------GEGSWEILGIMPCMDPPRHDTYKTVCEAK 548
Query: 332 QAGIKVWVLTGDKQDTAISIA 352
G+ + +LTGD A +
Sbjct: 549 TLGLSIKMLTGDAVGIARETS 569
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 | Back alignment and structure |
|---|
Score = 43.5 bits (103), Expect = 2e-04
Identities = 14/41 (34%), Positives = 19/41 (46%)
Query: 36 EDLGQIRYIFSDKTGTLTENKMEFQRASVCGKNYGNSLLLA 76
E L + + SDKTGTLT+NK+ L+L
Sbjct: 367 ESLAGVEILCSDKTGTLTKNKLSLHDPYTVAGVDPEDLMLT 407
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} Length = 170 | Back alignment and structure |
|---|
Score = 65.3 bits (160), Expect = 1e-12
Identities = 29/124 (23%), Positives = 42/124 (33%), Gaps = 30/124 (24%)
Query: 201 FDSVRKRMSVVIRFPDNSVKVLVKGADSSMFNILAKDSKRNDLIRHITQSHL-------S 253
FD R+RMSVV+ +++ KGA + N+ + N I + L
Sbjct: 64 FDFERRRMSVVVAENTEHHQLVCKGALQEILNV-CSQVRHNGEIVPLDDIMLRKIKRVTD 122
Query: 254 EYSSQGLRTLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGAT 313
+ QGLR + VA++ L E E DL L G
Sbjct: 123 TLNRQGLRVVAVATKYLPARE----------------------GDYQRADESDLILEGYI 160
Query: 314 GIED 317
D
Sbjct: 161 AFLD 164
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 65.3 bits (158), Expect = 5e-11
Identities = 66/512 (12%), Positives = 145/512 (28%), Gaps = 136/512 (26%)
Query: 5 RLGQSYFMIEDKHMYDSSSGSRFQCRTLSINED--LGQIRYIFSDKTGTLTENKMEFQRA 62
+ + + +F L IN + I+ + + QR
Sbjct: 60 AVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPS--MMTRMYIEQRD 117
Query: 63 SVCGKNYGNSLLLAQQVSAAAVRRWKLKSEISVDSKLMEL------------------LS 104
+ N Q + V R + ++ L+EL ++
Sbjct: 118 RLYNDN--------QVFAKYNVSRLQPYLKLR--QALLELRPAKNVLIDGVLGSGKTWVA 167
Query: 105 KDLVGDERIAAHEFF----LTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDE 160
D+ ++ F L L CN+ +LE ++ + YQ + P+
Sbjct: 168 LDVCLSYKVQCKMDFKIFWLNLKNCNS-------------PETVLEMLQKLLYQID-PNW 213
Query: 161 QALVSAASAYGYTLFERTSGHIVIDINGEGLR--LDVLGLHEFDSVRKRMSVVIRFPDNS 218
+ +S + + + + L VL +V+ F + S
Sbjct: 214 TSRSDHSSNIKLRI-HSIQAELRRLLKSKPYENCLLVL-----LNVQNA-KAWNAF-NLS 265
Query: 219 VKVLVKGADSSMFNILAKDSKRNDLIRHITQSHLSEYSSQGLRTLVVASRDLADEELKQW 278
K+L+ + + L+ HI+ H S L + D L ++
Sbjct: 266 CKILLTTRFKQVTDFLS-----AATTTHISLDHHSM----TL------TPDEVKSLLLKY 310
Query: 279 QHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVW 338
L R L + + I + ++DG + +
Sbjct: 311 ----------LDCRPQDLPREV----LTTNPRRLSIIAESIRDG-LATWDNWKH------ 349
Query: 339 VLTGDKQDTAISIALSCKLLTP-DMQQ-------------I------IINGNSEEECKDL 378
+ DK T I +L+ L P + ++ I +I + + +
Sbjct: 350 -VNCDKLTTIIESSLNV--LEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMV 406
Query: 379 LADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHD--VKEVAAIAS-- 434
+ + +Y + + K + + I + + K + H V +
Sbjct: 407 VVNKLHKYSL-----VEKQPK-ESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFD 460
Query: 435 ----LALIIDG---NSLVYILEKDLESDLFDL 459
+ +D + + + L+ + L
Sbjct: 461 SDDLIPPYLDQYFYSHIGHHLKNIEHPERMTL 492
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 44.5 bits (104), Expect = 1e-04
Identities = 60/484 (12%), Positives = 139/484 (28%), Gaps = 149/484 (30%)
Query: 272 DEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALR 331
D E + Q++Y+D + D + + ++L I+ + +A+
Sbjct: 8 DFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIM--SKDAVSGTL 65
Query: 332 ----------QAGIKVWVLTGDKQD---TAISIALSCKLLTPDMQQII------INGN-- 370
+ ++ +V + + I + + + I N N
Sbjct: 66 RLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQV 125
Query: 371 ------SEEECKDLLADA--KAR-------YGV----KSS-------------------- 391
S + L A + R GV K+
Sbjct: 126 FAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIF 185
Query: 392 --NRTKCNSK---LKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDG----N 442
N CNS L+ ++ Y N SD ++ + A L ++ N
Sbjct: 186 WLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYEN 245
Query: 443 SLVYILEKDLES----DLFDLATSCRVVLCCR---------VAPLQKAGIVDLIKSRTDD 489
L+ +L ++++ + F+L SC+++L R A + + T D
Sbjct: 246 CLL-VLL-NVQNAKAWNAFNL--SCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPD 301
Query: 490 MTLAIGDGANDVSMIQMADVGVGI-CGQEGRQAVMASDFAMGQF-RFLKRLLLVHGHW-N 546
++ + + R+ + + + ++ L W N
Sbjct: 302 EVKSL-----------LLKY-LDCRPQDLPREVLTTNPRRLSIIAESIRDGL---ATWDN 346
Query: 547 YQRIGY----------------LVLYNFYRN-AVF---------VLMLFWY--------I 572
++ + + +VF +L L W+ +
Sbjct: 347 WKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMV 406
Query: 573 LFTGFSTTSALT-DWSSVFYSL--LYTSVPTIVVGIVDKDLSHKTLMQYPKLYVVQQYLW 629
+ S + S+ +Y + + + L H++++ + Y + +
Sbjct: 407 VVNKLHKYSLVEKQPKESTISIPSIYLELKVKLEN--EYAL-HRSIVDH---YNIPKTFD 460
Query: 630 PSDI 633
D+
Sbjct: 461 SDDL 464
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645 | Back alignment and structure |
|---|
Score = 58.7 bits (143), Expect = 4e-09
Identities = 19/72 (26%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Query: 284 DASTSLVDRASKLR---QTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVL 340
S + KL +TA ++ + + G + D L++ A++ L++ GIKV ++
Sbjct: 420 AVSNEVELALEKLEREAKTAVIVARNGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMI 479
Query: 341 TGDKQDTAISIA 352
TGD +A +I+
Sbjct: 480 TGDNWRSAEAIS 491
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 57.9 bits (141), Expect = 7e-09
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 287 TSLVDRASKLR---QTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGD 343
L ++A +LR + + D + +ED ++ PE I L+Q+GI++ +LTGD
Sbjct: 520 APLFEKADELRGKGASVMFMAVDGKTVALLVVEDPIKSSTPETILELQQSGIEIVMLTGD 579
Query: 344 KQDTAISIA 352
+ TA ++A
Sbjct: 580 SKRTAEAVA 588
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* Length = 280 | Back alignment and structure |
|---|
Score = 56.3 bits (137), Expect = 8e-09
Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Query: 283 EDASTSLVDRASKLR---QTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWV 339
+ + KL+ +T I + + G + D+++ EAI L+ GIK +
Sbjct: 106 RELGIKTDESVEKLKQQGKTVVFILKNGEVSGVIALADRIRPESREAISKLKAIGIKCMM 165
Query: 340 LTGDKQDTAISIA 352
LTGD + A +A
Sbjct: 166 LTGDNRFVAKWVA 178
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 | Back alignment and structure |
|---|
Score = 57.5 bits (140), Expect = 1e-08
Identities = 18/92 (19%), Positives = 47/92 (51%), Gaps = 4/92 (4%)
Query: 261 RTLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQ 320
++V ++ L ++ + + +++ + +TA ++ + + G + D L+
Sbjct: 482 DGILVGNKRL----MEDFGVAVSNEVELALEKLEREAKTAVIVARNGRVEGIIAVSDTLK 537
Query: 321 DGVPEAIEALRQAGIKVWVLTGDKQDTAISIA 352
+ A++ L++ GIKV ++TGD +A +I+
Sbjct: 538 ESAKPAVQELKRMGIKVGMITGDNWRSAEAIS 569
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I Length = 287 | Back alignment and structure |
|---|
Score = 55.2 bits (134), Expect = 2e-08
Identities = 19/72 (26%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Query: 284 DASTSLVDRASKLR---QTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVL 340
S + KL +TA ++ + + G + D L++ A++ L++ GIKV ++
Sbjct: 126 AVSNEVELALEKLEREAKTAVIVARNGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMI 185
Query: 341 TGDKQDTAISIA 352
TGD +A +I+
Sbjct: 186 TGDNWRSAEAIS 197
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A Length = 249 | Back alignment and structure |
|---|
Score = 54.8 bits (131), Expect = 2e-08
Identities = 41/239 (17%), Positives = 70/239 (29%), Gaps = 22/239 (9%)
Query: 302 LIECDL--TLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLT 359
LI D+ TL+ D IE L+ G ++ + T K L
Sbjct: 4 LIFLDIDKTLI-----PGYEPDPAKPIIEELKDMGFEIIFNSSK---TRAEQEYYRKELE 55
Query: 360 PDMQQIIING-----NSEEECKDLLADAKARY-----GVKSSNRTKCNSKLKRSAEIEYL 409
+ I NG D+ Y G++ + KL+ ++Y
Sbjct: 56 VETPFISENGSAIFIPKGYFPFDVKGKEVGNYIVIELGIRVEKIREELKKLENIYGLKYY 115
Query: 410 AISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCC 469
S + A+ E+ L F + R
Sbjct: 116 GNSTKEEIEKFTGMPPELVPLAMEREYSETIFEWSRDGWEEVLVEGGFKVTMGSRFYTVH 175
Query: 470 RVAPLQKAG--IVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASD 526
+ KA ++D K + A+GD ND M ++ D + + ++A S
Sbjct: 176 GNSDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVGSLKHKKAQNVSS 234
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* Length = 263 | Back alignment and structure |
|---|
Score = 54.0 bits (131), Expect = 4e-08
Identities = 11/55 (20%), Positives = 27/55 (49%)
Query: 298 QTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIA 352
+ + + + I D + + + +E L+ G+K+ +L+GDK+D ++
Sbjct: 116 NNDIAVYINGEPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELS 170
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A Length = 225 | Back alignment and structure |
|---|
Score = 48.8 bits (117), Expect = 2e-06
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Query: 476 KAGIVDLIKSRTD-DMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMA-SDFAMGQFR 533
K ++ L+K + + IGDGA D+ AD +G G RQ V + + + F
Sbjct: 158 KGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITDFV 217
Query: 534 FLKRLL 539
L L
Sbjct: 218 ELLGEL 223
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* Length = 259 | Back alignment and structure |
|---|
Score = 48.8 bits (116), Expect = 2e-06
Identities = 37/242 (15%), Positives = 75/242 (30%), Gaps = 28/242 (11%)
Query: 302 LIECDL--TLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLT 359
++ DL TLL E EA+E LR G+ V +T K + + L
Sbjct: 2 IVFTDLDGTLLD----ERGELGPAREALERLRALGVPVVPVTA-KTRKEV------EALG 50
Query: 360 PDMQQIIING-----NSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISND 414
+ I+ NG + + R + K ++L+ + + I
Sbjct: 51 LEPPFIVENGGGLYLPRDWPVRAGRPKGGYRVVSLAWPYRKVRARLREAEALAGRPILGY 110
Query: 415 AKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKD---LESDLFDLATSCRVVLCCRV 471
+ A A + + + + ++ + L +
Sbjct: 111 GDLTAEAVARLTGLSREAARRAKAREYDETLVLCPEEVEAVLEALEAVGLEWTHGGRFYH 170
Query: 472 APLQ--KAGIVDLI-----KSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMA 524
A K V + + +GD ND+ + + D+ V + + + V+A
Sbjct: 171 AAKGADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYVGRGDPPEGVLA 230
Query: 525 SD 526
+
Sbjct: 231 TP 232
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} Length = 268 | Back alignment and structure |
|---|
Score = 47.5 bits (114), Expect = 5e-06
Identities = 38/245 (15%), Positives = 84/245 (34%), Gaps = 60/245 (24%)
Query: 302 LIECDL--TLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTG-----------DKQDTA 348
++ D+ TLL + K+ +A++ + +GIK+ + TG D
Sbjct: 14 VLLLDVDGTLL--SFETHKVSQSSIDALKKVHDSGIKIVIATGRAASDLHEIDAVPYDGV 71
Query: 349 ISI--ALSCKLLTPDMQQIIINGNSEEECKDLLADAKAR---YGVKSSNR---TKCNSKL 400
I++ A + D I ++ + + A+ ++ + + +
Sbjct: 72 IALNGAE---CVLRDGSVIRKVAIPAQDFRKSMELAREFDFAVALELNEGVFVNRLTPTV 128
Query: 401 KRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLA 460
++ A I + ++ + + L + +++ E + L
Sbjct: 129 EQIAGIVEHPVPPVVDIEEMFERKEC---------------CQLCFYFDEEAEQKVMPLL 173
Query: 461 TSCRVVLCCRVAPL---------QKA-GIVDLIK----SRTDDMTLAIGDGANDVSMIQM 506
+ R PL KA G+ ++ +A GDG ND+ M++
Sbjct: 174 SGLSAT---RWHPLFADVNVAGTSKATGLSLFADYYRVKVSE--IMACGDGGNDIPMLKA 228
Query: 507 ADVGV 511
A +GV
Sbjct: 229 AGIGV 233
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* Length = 211 | Back alignment and structure |
|---|
Score = 44.8 bits (107), Expect = 2e-05
Identities = 12/27 (44%), Positives = 19/27 (70%)
Query: 491 TLAIGDGANDVSMIQMADVGVGICGQE 517
T+A+GDGAND+SM + A + + C +
Sbjct: 162 TVAVGDGANDISMFKKAGLKIAFCAKP 188
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} Length = 217 | Back alignment and structure |
|---|
Score = 44.5 bits (106), Expect = 3e-05
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 491 TLAIGDGANDVSMIQMADVGVGICGQE 517
TL +GDGAND+SM + A + + +E
Sbjct: 161 TLVVGDGANDLSMFKHAHIKIAFNAKE 187
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} Length = 317 | Back alignment and structure |
|---|
Score = 44.8 bits (106), Expect = 6e-05
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 491 TLAIGDGANDVSMIQMADVGVGICG 515
+A GDGAND+ M++ A G+
Sbjct: 265 IIACGDGANDLPMLEHAGTGIAWKA 289
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} Length = 335 | Back alignment and structure |
|---|
Score = 44.3 bits (105), Expect = 7e-05
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 491 TLAIGDGANDVSMIQMADVGVGICGQE 517
T+A+GDGAND+ M+ A +GV +
Sbjct: 264 TVAVGDGANDLVMMAAAGLGVAYHAKP 290
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 Length = 275 | Back alignment and structure |
|---|
Score = 43.9 bits (103), Expect = 8e-05
Identities = 36/226 (15%), Positives = 72/226 (31%), Gaps = 21/226 (9%)
Query: 302 LIECDL--TLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLT 359
L+ DL TLL + + LR+A + V + + K + + L L
Sbjct: 11 LVFSDLDGTLLDS---HSYDWQPAAPWLTRLREANVPVILCSS-KTSAEM-LYLQKTLGL 65
Query: 360 PDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSD 419
+ I NG + + + + + + L E E+ + D
Sbjct: 66 QGLPLIAENGAVIQLAEQWQEIDGFPRIISGISHGEISLVLNTLREKEHFKFTTFDDVDD 125
Query: 420 VPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQ---- 475
+ A+L + + + + + D F + + + A
Sbjct: 126 ATIAEWTGLSRSQAALTQLHEASVTLIWRDSDERMAQFTARLNELGLQFMQGARFWHVLD 185
Query: 476 ----KA----GIVDLIKSRTDDM--TLAIGDGANDVSMIQMADVGV 511
K I+ + + TL +GDG ND ++++ D V
Sbjct: 186 ASAGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYAV 231
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A Length = 206 | Back alignment and structure |
|---|
Score = 43.0 bits (102), Expect = 8e-05
Identities = 12/39 (30%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Query: 473 PLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGV 511
K V KS +A GD ND +M+ A G+
Sbjct: 131 KDPKRQSVIAFKSLYYR-VIAAGDSYNDTTMLSEAHAGI 168
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A Length = 261 | Back alignment and structure |
|---|
Score = 43.7 bits (104), Expect = 9e-05
Identities = 40/229 (17%), Positives = 78/229 (34%), Gaps = 71/229 (31%)
Query: 325 EAIEALRQAGIKVWVL-TG---------------DKQDTAISI--ALSCKLLTPDMQQII 366
EA+EA G+K+ + TG + D I++ A
Sbjct: 27 EALEAAHAKGLKI-FIATGRPKAIINNLSELQDRNLIDGYITMNGAY-----------CF 74
Query: 367 INGN-------SEEECKDLLADAKAR---YGVKSSNRTKCNSKLKRSAEIEYLAISNDAK 416
+ +EE K + A + + + + +I Y + +
Sbjct: 75 VGEEVIYKSAIPQEEVKAMAAFCEKKGVPCIFVEEHNISVCQPNEMVKKIFYDFLHVNVI 134
Query: 417 FSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQ- 475
+ + KEV + +I E++ + ++ +C + R P
Sbjct: 135 PTVSFEEASNKEVIQM-----------TPFITEEEEK-EVLPSIPTCEIG---RWYPAFA 179
Query: 476 --------KA-GIVDLIK----SRTDDMTLAIGDGANDVSMIQMADVGV 511
K GI ++I+ + T++ GDG ND+SM++ A +GV
Sbjct: 180 DVTAKGDTKQKGIDEIIRHFGIKLEE--TMSFGDGGNDISMLRHAAIGV 226
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} Length = 415 | Back alignment and structure |
|---|
Score = 43.6 bits (103), Expect = 2e-04
Identities = 11/27 (40%), Positives = 18/27 (66%)
Query: 491 TLAIGDGANDVSMIQMADVGVGICGQE 517
T+A+GDGAND+ M+ A +G+ +
Sbjct: 342 TVAVGDGANDIDMLAAAGLGIAFNAKP 368
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} Length = 274 | Back alignment and structure |
|---|
Score = 43.0 bits (102), Expect = 2e-04
Identities = 38/242 (15%), Positives = 77/242 (31%), Gaps = 41/242 (16%)
Query: 302 LIECDL--TLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLT 359
L+ D+ TL + + AI ++ V + TG T L
Sbjct: 7 LLILDIDGTLRDEVY---GIPESAKHAIRLCQKNHCSVVICTGRSMGTIQDDV---LSLG 60
Query: 360 PDM------QQIIINGN-------SEEECKDLLADAKAR---YGVKSSNRTKCNSKLKRS 403
D I +G ++ K+++ K R + ++S + N K K
Sbjct: 61 VDGYIAGGGNYIQYHGELLYNQSFNQRLIKEVVCLLKKREVAFSIESQEKVFMNQKAKEI 120
Query: 404 AEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSC 463
E ++ + + I D + + + + ++ D+
Sbjct: 121 FETMNQLKGTNSCINKQHIQEKITYENNIEEY-KSQDIHKICLWSNEKVFDEVKDILQDK 179
Query: 464 RVVLCCRVAPL---------QKA-GIVDLIK----SRTDDMTLAIGDGANDVSMIQMADV 509
+ ++ K I L + ++ + T+ GDG ND+ M Q +DV
Sbjct: 180 MELAQRDISSQYYEIIQKDFHKGKAIKRLQERLGVTQKE--TICFGDGQNDIVMFQASDV 237
Query: 510 GV 511
+
Sbjct: 238 TI 239
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 Length = 236 | Back alignment and structure |
|---|
Score = 42.4 bits (100), Expect = 2e-04
Identities = 11/70 (15%), Positives = 23/70 (32%), Gaps = 7/70 (10%)
Query: 465 VVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVG------VGICGQEG 518
C K ++ + + IGD DV +++D+ + C ++
Sbjct: 141 KGTCSNQCGCCKPSVIHELSEPNQY-IIMIGDSVTDVEAAKLSDLCFARDYLLNECREQN 199
Query: 519 RQAVMASDFA 528
+ DF
Sbjct: 200 LNHLPYQDFY 209
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A Length = 258 | Back alignment and structure |
|---|
Score = 42.1 bits (100), Expect = 3e-04
Identities = 46/233 (19%), Positives = 75/233 (32%), Gaps = 52/233 (22%)
Query: 308 TLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDM----- 362
TLL +L EA+ L+Q+G+ V + TG + K L D
Sbjct: 13 TLLDEQK---QLPLSTIEAVRRLKQSGVYVAIATGRAPFMFEHVR---KQLGIDSFVSFN 66
Query: 363 -QQIIINGN-------SEEECKDLLADAKAR-YGVKSSNRTKCNSKLKRSAEIEYLAISN 413
Q ++ GN E+ + L +A + + + K + + I S
Sbjct: 67 GQYVVFEGNVLYKQPLRREKVRALTEEAHKNGHPLVFMDAEKMRASIGDHPHIHVSMASL 126
Query: 414 DAKFSDV-PQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVA 472
V P ++ K++ + + E R V R
Sbjct: 127 KFAHPPVDPLYYENKDI------------YQALLFCRAEEEEPYVRNYPEFRFV---RWH 171
Query: 473 PLQ---------KA-GIVDLIK----SRTDDMTLAIGDGANDVSMIQMADVGV 511
+ KA GI +I+ + D A GDG ND+ M+ GV
Sbjct: 172 DVSTDVLPAGGSKAEGIRMMIEKLGIDKKD--VYAFGDGLNDIEMLSFVGTGV 222
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} Length = 279 | Back alignment and structure |
|---|
Score = 41.4 bits (98), Expect = 6e-04
Identities = 9/21 (42%), Positives = 15/21 (71%)
Query: 491 TLAIGDGANDVSMIQMADVGV 511
+ +GD ND++MI+ A +GV
Sbjct: 216 VMTLGDQGNDLTMIKYAGLGV 236
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 Length = 301 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 6e-04
Identities = 6/21 (28%), Positives = 10/21 (47%)
Query: 491 TLAIGDGANDVSMIQMADVGV 511
L +GD ND++M+
Sbjct: 243 VLVVGDAENDIAMLSNFKYSF 263
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} Length = 219 | Back alignment and structure |
|---|
Score = 40.3 bits (95), Expect = 8e-04
Identities = 12/53 (22%), Positives = 21/53 (39%), Gaps = 3/53 (5%)
Query: 491 TLAIGDGANDVSMIQ--MADVGVGICGQEGRQAVMA-SDFAMGQFRFLKRLLL 540
+AIGDG D + + A + R+ V+ S + L L++
Sbjct: 167 VIAIGDGYTDYQLYEKGYATKFIAYMEHIEREKVINLSKYVARNVAELASLIM 219
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 Length = 282 | Back alignment and structure |
|---|
Score = 41.0 bits (97), Expect = 8e-04
Identities = 12/21 (57%), Positives = 16/21 (76%)
Query: 491 TLAIGDGANDVSMIQMADVGV 511
+AIGD ND++MI+ A VGV
Sbjct: 217 IMAIGDQENDIAMIEYAGVGV 237
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 Length = 231 | Back alignment and structure |
|---|
Score = 40.5 bits (96), Expect = 8e-04
Identities = 6/21 (28%), Positives = 10/21 (47%)
Query: 491 TLAIGDGANDVSMIQMADVGV 511
+GDG ND+ ++ V
Sbjct: 172 VAHVGDGENDLDAFKVVGYKV 192
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 Length = 268 | Back alignment and structure |
|---|
Score = 40.6 bits (96), Expect = 9e-04
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 491 TLAIGDGANDVSMIQMADVGV 511
+ GD ND+ M + A + V
Sbjct: 209 IVVFGDNENDLFMFEEAGLRV 229
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 658 | |||
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 100.0 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 100.0 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 100.0 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 100.0 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 100.0 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 100.0 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 99.87 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.91 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.88 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 99.86 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 99.86 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 99.86 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 99.86 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 99.84 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 99.84 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 99.84 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 99.83 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 99.83 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 99.83 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 99.81 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 99.81 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 99.79 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 99.79 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 99.76 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 99.75 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 99.75 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 99.72 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 99.7 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 99.7 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 99.7 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 99.69 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 99.69 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 99.68 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 99.67 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 99.67 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 99.64 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 99.49 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 99.48 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.45 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 99.45 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.44 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 99.39 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 99.31 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.29 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 99.28 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 99.21 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 99.19 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 99.19 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 99.11 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 99.05 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 99.03 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 99.03 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 99.01 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 99.0 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 99.0 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 98.96 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 98.89 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 98.85 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 98.8 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 98.76 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 98.75 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 98.74 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 98.74 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 98.73 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 98.67 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 98.64 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 98.62 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 98.61 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 98.6 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 98.59 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 98.57 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 98.54 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 98.53 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 98.52 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 98.5 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 98.5 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 98.47 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 98.45 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 98.45 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 98.45 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 98.41 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 98.41 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 98.39 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 98.39 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 98.38 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 98.36 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 98.36 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 98.35 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 98.34 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 98.3 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 98.29 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 98.26 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 98.26 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 98.25 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 98.24 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 98.24 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 98.23 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 98.23 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 98.23 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 98.22 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 98.2 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 98.2 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 98.2 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 98.17 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 98.17 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 98.16 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 98.16 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 98.16 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 98.15 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 98.13 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 98.12 | |
| 1svj_A | 156 | Potassium-transporting ATPase B chain; alpha-beta | 98.11 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 98.05 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 98.05 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 98.04 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 98.02 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 98.02 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 98.01 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 98.0 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 98.0 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 98.0 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 97.97 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 97.96 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 97.88 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 97.87 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 97.83 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 97.78 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 97.77 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 97.68 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 97.61 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 97.61 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 97.59 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 97.41 | |
| 1xpj_A | 126 | Hypothetical protein; structural genomics, MCSG, p | 97.4 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 97.26 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 97.2 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 97.18 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 97.06 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 96.95 | |
| 2kmv_A | 185 | Copper-transporting ATPase 1; menkes, nucleotide b | 96.89 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 96.6 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 96.57 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 96.57 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 96.55 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 96.34 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 96.14 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 96.12 | |
| 2hx1_A | 284 | Predicted sugar phosphatases of the HAD superfamil | 96.02 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 95.59 | |
| 2hhl_A | 195 | CTD small phosphatase-like protein; CTD phosphatas | 94.82 | |
| 2ght_A | 181 | Carboxy-terminal domain RNA polymerase II polypept | 94.19 | |
| 3kc2_A | 352 | Uncharacterized protein YKR070W; HAD-like, mitocho | 93.85 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 92.36 | |
| 2arf_A | 165 | Wilson disease ATPase; P-type ATPase,ATP7B, copper | 91.39 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 91.36 | |
| 2g80_A | 253 | Protein UTR4; YEL038W, UTR4 protein (unknown trans | 86.1 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 81.43 |
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-62 Score=571.64 Aligned_cols=478 Identities=20% Similarity=0.202 Sum_probs=359.0
Q ss_pred CCCeeeeccCCcccccccceEEEeccCcccccceEEEEEEEEcCcccCCchhhHHHHHHHHHhhhccccccccChHHHHH
Q 041225 23 SGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCGKNYGNSLLLAQQVSAAAVRRWKLKSEISVDSKLMEL 102 (658)
Q Consensus 23 ~~~~i~vr~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (658)
.+++++||+++++|+||++++||||||||||+|+|+|.++++++..+...... ..+..
T Consensus 362 ak~~~lvr~l~avE~LG~v~~IcsDKTGTLT~n~m~v~~~~~~~~~~~~~~~~-------------~~~~~--------- 419 (1034)
T 3ixz_A 362 ASKNCVVKNLEAVETLGSTSVICSDKTGTLTQNRMTVSHLWFDNHIHSADTTE-------------DQSGQ--------- 419 (1034)
T ss_pred hhCCeEecChHHHHhhcCCcEEEcCCCCCcccCeEEEEEEEECCccccccCcc-------------ccccc---------
Confidence 46789999999999999999999999999999999999999987655421100 00000
Q ss_pred HhhccCcchhHHHHHHHHHHhhccceeecCCCCCCCCCCCCcccCCcceeeecCChhHHHHHHHHHHcCcEEEEEcCCeE
Q 041225 103 LSKDLVGDERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYTLFERTSGHI 182 (658)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~~ 182 (658)
.........+.++.++++||++......... ..... ...++|+|.|+++++...+...
T Consensus 420 ----~~~~~~~~~~~l~~~~~lc~~a~~~~~~~~~---------~~~~~-~~~gdp~e~All~~~~~~~~~~-------- 477 (1034)
T 3ixz_A 420 ----TFDQSSETWRALCRVLTLCNRAAFKSGQDAV---------PVPKR-IVIGDASETALLKFSELTLGNA-------- 477 (1034)
T ss_pred ----ccCcCCHHHHHHHHHHHHhccceeccCcCCC---------cccCc-eeccCchHHHHHHHHHHhCCCh--------
Confidence 0011223456788999999988764332110 00112 2335999999999998876432
Q ss_pred EEEeCCcEEEEEEEEeeCCCCCCCeeEEEEEcCC---CcEEEEEeCCchHhHHhhhcCc------cccHHHHHHHHHHHH
Q 041225 183 VIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPD---NSVKVLVKGADSSMFNILAKDS------KRNDLIRHITQSHLS 253 (658)
Q Consensus 183 ~~~~~g~~~~~~il~~~~F~s~rk~msviv~~~~---~~~~l~~KGa~e~i~~~~~~~~------~~~~~~~~~~~~~~~ 253 (658)
.+...+++++..+||+|+||||+++++..+ +.+.+|+|||||.|+++|+... ..++..++.+.+.++
T Consensus 478 ----~~~~~~~~~~~~~pF~s~rk~m~~v~~~~~~~~~~~~l~~KGApe~il~~c~~~~~~~~~~~l~~~~~~~~~~~~~ 553 (1034)
T 3ixz_A 478 ----MGYRERFPKVCEIPFNSTNKFQLSIHTLEDPRDPRHVLVMKGAPERVLERCSSILIKGQELPLDEQWREAFQTAYL 553 (1034)
T ss_pred ----HHHHHhCcceEEeeecCCCceEEEEEEecCCCCccEEEEEeCChHHHHHHhHHhhcCCceecCCHHHHHHHHHHHH
Confidence 123346788899999999999999887643 6789999999999999998532 245677888999999
Q ss_pred HHhhcCCeEEEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccccCCChHHHHHHHHhc
Q 041225 254 EYSSQGLRTLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQA 333 (658)
Q Consensus 254 ~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~ 333 (658)
.++.+|+||+++|+|.++.+++..+..... ....+.+.|++|+|.++++|+++++++++|++|+++
T Consensus 554 ~~a~~G~RvLa~A~~~l~~~~~~~~~~~~~--------------~~~~~~e~~l~~lGlv~i~Dp~r~~~~~aI~~l~~a 619 (1034)
T 3ixz_A 554 SLGGLGERVLGFCQLYLSEKDYPPGYAFDV--------------EAMNFPTSGLSFAGLVSMIDPPRATVPDAVLKCRTA 619 (1034)
T ss_pred HHHhcCcHhheEeEEecChhhcccccccch--------------hhhhccccCcEEEEEEeccCCCchhHHHHHHHHHHc
Confidence 999999999999999998776543221100 112345789999999999999999999999999999
Q ss_pred CCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhc
Q 041225 334 GIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISN 413 (658)
Q Consensus 334 GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (658)
||+++|+|||++.+|.++|+++|+...+.. .+.++ ... ......
T Consensus 620 GI~vvmiTGd~~~tA~~ia~~lgi~~~~~~----------~i~~~---~~~-~~~~~~---------------------- 663 (1034)
T 3ixz_A 620 GIRVIMVTGDHPITAKAIAASVGIISEGSE----------TVEDI---AAR-LRVPVD---------------------- 663 (1034)
T ss_pred CCeEEEEeCCCHHHHHHHHHHcCCCCCCch----------HHHHH---HHh-hCccch----------------------
Confidence 999999999999999999999999764321 11111 110 000000
Q ss_pred CCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhcCCCeEEE
Q 041225 414 DAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLA 493 (658)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~~~~~v~a 493 (658)
. .........+.++..+.....+ .+.......+..++++.+|.+|..+++.+++. +..|+|
T Consensus 664 -----~---------~~~~~~~~~~~~g~~l~~~~~~----~l~~~~~~~~~~v~ar~~P~~K~~iv~~lq~~-g~~V~a 724 (1034)
T 3ixz_A 664 -----Q---------VNRKDARACVINGMQLKDMDPS----ELVEALRTHPEMVFARTSPQQKLVIVESCQRL-GAIVAV 724 (1034)
T ss_pred -----h---------ccccccceeEEecHhhhhCCHH----HHHHHHHhCCceEEEecCHHHHHHHHHHHHHc-CCEEEE
Confidence 0 0000111233444443332222 22233334445689999999999999999998 689999
Q ss_pred EcCCcCChhhhhhcceeEEecCccchhhhhhcccccccccchHHHHhh-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 041225 494 IGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLV-HGHWNYQRIGYLVLYNFYRNAVFVLMLFWYI 572 (658)
Q Consensus 494 iGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~-~gr~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 572 (658)
||||.||++||+.||+||||++++.+.+|++||+|+.++++...+.++ |||.+|+|+++++.|.+++|+..+++.+++.
T Consensus 725 ~GDG~ND~~mLk~A~vGIAMg~ng~d~aK~aAD~Vl~~~~~~gI~~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~ 804 (1034)
T 3ixz_A 725 TGDGVNDSPALKKADIGVAMGIAGSDAAKNAADMILLDDNFASIVTGVEQGRLIFDNLKKSIAYTLTKNIPELTPYLIYI 804 (1034)
T ss_pred ECCcHHhHHHHHHCCeeEEeCCccCHHHHHhcCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999995488888999999999999999999888 9999999999999999999999999999888
Q ss_pred HhhccccccchhhHHHHHHHHHHhhhhhhhheecccCCChHHHhhCCccc
Q 041225 573 LFTGFSTTSALTDWSSVFYSLLYTSVPTIVVGIVDKDLSHKTLMQYPKLY 622 (658)
Q Consensus 573 ~~~~~s~~~~~~~~~~~~~n~~~~~~p~~~~~~~~~~~~~~~~~~~p~~y 622 (658)
++ ..+.|+.+++++|+|++++.+|+++++... .+++.+.+.|.-.
T Consensus 805 ~~---~~~~pl~~~qiL~inl~~d~~palal~~e~--~~~~~m~~~Pr~~ 849 (1034)
T 3ixz_A 805 TV---SVPLPLGCITILFIELCTDIFPSVSLAYEK--AESDIMHLRPRNP 849 (1034)
T ss_pred HH---hhhhhHHHHHHHHHHHHHHHHHHHHhhcCC--CChhhhhCCCCCC
Confidence 87 456799999999999999999999997532 3444544556443
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-60 Score=556.30 Aligned_cols=479 Identities=23% Similarity=0.254 Sum_probs=345.4
Q ss_pred CCeeeeccCCcccccccceEEEeccCcccccceEEEEEEEEcCcccCCchhhHHHHHHHHHhhhccccccccChHHHHHH
Q 041225 24 GSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCGKNYGNSLLLAQQVSAAAVRRWKLKSEISVDSKLMELL 103 (658)
Q Consensus 24 ~~~i~vr~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (658)
+++++||+++++|+||++++||||||||||+|+|+|.++++.+..++...... ... .....+.+.+....+.
T Consensus 329 ~~~~lvr~~~~iE~Lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~-~~~-~~~~~~~p~~~~~~~~------ 400 (995)
T 3ar4_A 329 KKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKMFIIDKVDGDFCSLN-EFS-ITGSTYAPEGEVLKND------ 400 (995)
T ss_dssp HTTEEESCTTHHHHHHTCCEEEEESTTTTBCCCCEEEEEEEEEEEETTEEEEE-EEE-ECCSSSSSCCCEEETT------
T ss_pred cCCcEeccchhhhhhcCceEEEecCCCCcccCceEEEEEEecCcccCcccccc-eee-ccCCCcCCcccccccc------
Confidence 46899999999999999999999999999999999999988653322100000 000 0000000100000000
Q ss_pred hhccCcchhHHHHHHHHHHhhccceeecCCCCCCCCCCCCcccCCcceeeecCChhHHHHHHHHHHcCcEEEEEcCCeEE
Q 041225 104 SKDLVGDERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYTLFERTSGHIV 183 (658)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~~~ 183 (658)
........+...+++.++++||++.+...+ ..+.+.. .++|+|.||+.++++.|+ +...... +.
T Consensus 401 -~~~~~~~~~~~~~l~~~~alc~~~~~~~~~------------~~~~~~~-~g~p~E~Al~~~a~~~g~-~~~~~~~-i~ 464 (995)
T 3ar4_A 401 -KPIRSGQFDGLVELATICALCNDSSLDFNE------------TKGVYEK-VGEATETALTTLVEKMNV-FNTEVRN-LS 464 (995)
T ss_dssp -EECCGGGCHHHHHHHHHHHHSCCCEEEEET------------TTTEEEE-ESCHHHHHHHHHHHHHCT-TCCCCTT-SC
T ss_pred -ccccccccHHHHHHHHHHHHcCCCcccccC------------CCCceee-cCCccHHHHHHHHHHcCC-ccccccc-cc
Confidence 001112234567788999999987653211 0112222 359999999999999886 1110000 00
Q ss_pred EEe------CCcEEEEEEEEeeCCCCCCCeeEEEEEcCCC-----cEEEEEeCCchHhHHhhhcCc------cccHHHHH
Q 041225 184 IDI------NGEGLRLDVLGLHEFDSVRKRMSVVIRFPDN-----SVKVLVKGADSSMFNILAKDS------KRNDLIRH 246 (658)
Q Consensus 184 ~~~------~g~~~~~~il~~~~F~s~rk~msviv~~~~~-----~~~l~~KGa~e~i~~~~~~~~------~~~~~~~~ 246 (658)
... .+....+++++.+||+|+||||||+++.+++ .+.+|+|||||.|+++|++.. ..++..++
T Consensus 465 ~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvi~~~~~g~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~ 544 (995)
T 3ar4_A 465 KVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKE 544 (995)
T ss_dssp TTTSTTHHHHHHHHHEEEEEEEEEETTTTEEEEEEEESSCCSCSCCCEEEEEECHHHHHHTEEEEEETTEEEECCHHHHH
T ss_pred cccccccchhhhhhhCceEEEeecCCCCCeeEEEEecCCCCccccceEEEEcCCHHHHHHhcchhhcCCCcccCCHHHHH
Confidence 000 0012458999999999999999999998776 689999999999999997542 23456678
Q ss_pred HHHHHHHHH--hhcCCeEEEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccccCCChH
Q 041225 247 ITQSHLSEY--SSQGLRTLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVP 324 (658)
Q Consensus 247 ~~~~~~~~~--~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~l~~~~~ 324 (658)
.+.++++++ +.+|+||+++|||.++..+. .....+ ......+|.|++|+|.++++|+++++++
T Consensus 545 ~~~~~~~~~~~a~~GlRvLa~A~k~~~~~~~----------~~~~~~-----~~~~~~~e~~l~~lG~~~i~D~lr~~~~ 609 (995)
T 3ar4_A 545 KILSVIKEWGTGRDTLRCLALATRDTPPKRE----------EMVLDD-----SSRFMEYETDLTFVGVVGMLDPPRKEVM 609 (995)
T ss_dssp HHHHHHHHHHHSTTCCEEEEEEEESSCCCGG----------GCCTTC-----GGGHHHHTCSEEEEEEEEEECCBCTTHH
T ss_pred HHHHHHHHHHhhhccceEEEEEEEecCcccc----------cccccc-----chhhhhhccCcEEEEEEeecCCCchhHH
Confidence 889999999 99999999999999854210 000000 0123456889999999999999999999
Q ss_pred HHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccchh
Q 041225 325 EAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSA 404 (658)
Q Consensus 325 ~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (658)
++|+.|+++||+++|+|||+..+|..+|+++|+...+..+ .+
T Consensus 610 ~~I~~l~~~Gi~v~miTGD~~~ta~~ia~~lgi~~~~~~i---~~----------------------------------- 651 (995)
T 3ar4_A 610 GSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEV---AD----------------------------------- 651 (995)
T ss_dssp HHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTSSCTTCCC---TT-----------------------------------
T ss_pred HHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCcCCCCCcc---cc-----------------------------------
Confidence 9999999999999999999999999999999997542210 00
Q ss_pred HHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHH
Q 041225 405 EIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIK 484 (658)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~ 484 (658)
.+..|.++...-.+. ...++. ...++++.+|.+|+.+|+.++
T Consensus 652 --------------------------------~~~~g~~~~~l~~~~----~~~~~~--~~~v~~r~~P~~K~~~v~~l~ 693 (995)
T 3ar4_A 652 --------------------------------RAYTGREFDDLPLAE----QREACR--RACCFARVEPSHKSKIVEYLQ 693 (995)
T ss_dssp --------------------------------TEEEHHHHHTSCHHH----HHHHHH--HCCEEESCCSSHHHHHHHHHH
T ss_pred --------------------------------eEEEchhhhhCCHHH----HHHHHh--hCcEEEEeCHHHHHHHHHHHH
Confidence 001111110000000 111111 246899999999999999999
Q ss_pred hcCCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhcccccccccchHHHHhh-hhhhHHHHHHHHHHHHHHHHHH
Q 041225 485 SRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLV-HGHWNYQRIGYLVLYNFYRNAV 563 (658)
Q Consensus 485 ~~~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~-~gr~~~~~~~~~i~~~~~~~~~ 563 (658)
++ ++.|+|+|||.||++||+.||+|||| +++.+.++++||+++.++++.....++ |||++|.|+++++.|.+++|+.
T Consensus 694 ~~-g~~v~~~GDG~ND~~alk~Advgiam-g~g~~~ak~aAd~vl~~~~~~~i~~~i~~GR~~~~~i~k~i~~~l~~Ni~ 771 (995)
T 3ar4_A 694 SY-DEITAMTGDGVNDAPALKKAEIGIAM-GSGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVG 771 (995)
T ss_dssp TT-TCCEEEEECSGGGHHHHHHSTEEEEE-TTSCHHHHHTCSEEETTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HC-CCEEEEEcCCchhHHHHHHCCeEEEe-CCCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98 68999999999999999999999999 577777999999999998887777555 9999999999999999999999
Q ss_pred HHHHHHHHHHhhccccccchhhHHHHHHHHHHhhhhhhhheecccCCChHHHhhCCccccc
Q 041225 564 FVLMLFWYILFTGFSTTSALTDWSSVFYSLLYTSVPTIVVGIVDKDLSHKTLMQYPKLYVV 624 (658)
Q Consensus 564 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~n~~~~~~p~~~~~~~~~~~~~~~~~~~p~~y~~ 624 (658)
.+++.+++.++ ..+.|+.+++++|+|++++.+|++++++++. +++.+.+.|..++.
T Consensus 772 ~~~~~~~~~~~---g~~~pl~~~qil~~nl~~d~~p~l~l~~~~~--~~~~m~~~P~~~~~ 827 (995)
T 3ar4_A 772 EVVCIFLTAAL---GLPEALIPVQLLWVNLVTDGLPATALGFNPP--DLDIMDRPPRSPKE 827 (995)
T ss_dssp HHHHHHHHHHT---TCCCSSCHHHHHHHHHTTTHHHHHHHTTCCC--CTTGGGSCCCCTTC
T ss_pred HHHHHHHHHHH---cCcchHHHHHHHHHHHHHHHHHHHhhccCCC--ChhHHhCCCCCCcc
Confidence 98888888776 3457889999999999999999999987654 34566666765544
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-59 Score=550.11 Aligned_cols=478 Identities=20% Similarity=0.229 Sum_probs=348.7
Q ss_pred CCCeeeeccCCcccccccceEEEeccCcccccceEEEEEEEEcCcccCCchhhHHHHHHHHHhhhccccccccChHHHHH
Q 041225 23 SGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCGKNYGNSLLLAQQVSAAAVRRWKLKSEISVDSKLMEL 102 (658)
Q Consensus 23 ~~~~i~vr~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (658)
.++|++||+++++|+||++++||||||||||+|+|+|.++++.+..+...... .....
T Consensus 357 ak~~ilvk~~~avE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~-------------~~~~~--------- 414 (1028)
T 2zxe_A 357 ARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTE-------------NQSGA--------- 414 (1028)
T ss_dssp HTTTEEESSTTHHHHHHHCCEEEECCCCCCBCSSCEEEEEEETTEEEECCCCT-------------TCCSC---------
T ss_pred hhCCceeccchHhhhhcCceEEeccCCCCCCCCeEEEEEEEECCeeeeccCCC-------------Ccccc---------
Confidence 35789999999999999999999999999999999999999887654211000 00000
Q ss_pred HhhccCcchhHHHHHHHHHHhhccceeecCCCCCCCCCCCCcccCCcceeeecCChhHHHHHHHHHHcCcEEEEEcCCeE
Q 041225 103 LSKDLVGDERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYTLFERTSGHI 182 (658)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~~ 182 (658)
.....+...++++.++++||++.+....+. +....... .++|+|.||++++...|...
T Consensus 415 ----~~~~~~~~~~~l~~~~alc~~~~~~~~~~~---------hp~~~~~~-~gdp~E~Al~~~a~~~~~~~-------- 472 (1028)
T 2zxe_A 415 ----AFDKTSATWSALSRIAALCNRAVFQAGQDN---------VPILKRSV-AGDASESALLKCIELCCGSV-------- 472 (1028)
T ss_dssp ----CCCSSCHHHHHHHHHHHHSCCCEECTTCTT---------SCGGGSCE-ESCHHHHHHHHHHHHHHSCH--------
T ss_pred ----ccccCCHHHHHHHHHHHhcCCCeeecCCCC---------Ccccccee-CCCchHHHHHHHHHHhCCCH--------
Confidence 001112345678899999999876432210 00112223 35999999999998763211
Q ss_pred EEEeCCcEEEEEEEEeeCCCCCCCeeEEEEEcC---CCcEEEEEeCCchHhHHhhhcCc------cccHHHHHHHHHHHH
Q 041225 183 VIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFP---DNSVKVLVKGADSSMFNILAKDS------KRNDLIRHITQSHLS 253 (658)
Q Consensus 183 ~~~~~g~~~~~~il~~~~F~s~rk~msviv~~~---~~~~~l~~KGa~e~i~~~~~~~~------~~~~~~~~~~~~~~~ 253 (658)
.+....++++..+||+|.||||+++++.+ ++.+.+|+|||||.|+++|+... ..++..++.+.+.++
T Consensus 473 ----~~~~~~~~~~~~~pF~s~rk~msvi~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~g~~~~l~~~~~~~~~~~~~ 548 (1028)
T 2zxe_A 473 ----QGMRDRNPKIVEIPFNSTNKYQLSIHENEKSSESRYLLVMKGAPERILDRCSTILLNGAEEPLKEDMKEAFQNAYL 548 (1028)
T ss_dssp ----HHHHHHSCEEEEECCCTTTCEEEEEEECSCTTTCCEEEEEEECHHHHHTTEEEECBTTBCCBCCHHHHHHHHHHHH
T ss_pred ----HHHHHhCceEEEeccCcccceEEEEEeccCCCCCcEEEEEeCCcHHHHHHhhhhhcCCCcccCCHHHHHHHHHHHH
Confidence 11122467788999999999999999975 57789999999999999997532 235667788999999
Q ss_pred HHhhcCCeEEEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccccCCChHHHHHHHHhc
Q 041225 254 EYSSQGLRTLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQA 333 (658)
Q Consensus 254 ~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~ 333 (658)
+++.+|+||+++|+|.++++++.++. .. ++ ......+.|++|+|.++++|+++++++++|++|+++
T Consensus 549 ~~a~~G~RvL~~A~~~l~~~~~~~~~--------~~-~~-----~~~~~~e~~l~~lG~i~i~Dplr~~~~~aI~~l~~a 614 (1028)
T 2zxe_A 549 ELGGLGERVLGFCHFALPEDKYNEGY--------PF-DA-----DEPNFPTTDLCFVGLMAMIDPPRAAVPDAVGKCRSA 614 (1028)
T ss_dssp HHHHTTCEEEEEEEEECCSTTSCTTC--------CC-CT-----TTTCSCCSSEEEEEEEEEECCBCTTHHHHHHHHHHT
T ss_pred HHHhcCCEEEEEEEEecCcccccccc--------cc-ch-----hhhhhhhcCeEEEeeeccCCCCChhHHHHHHHHHHc
Confidence 99999999999999998764321100 00 00 001124679999999999999999999999999999
Q ss_pred CCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhc
Q 041225 334 GIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISN 413 (658)
Q Consensus 334 GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (658)
||+++|+|||+..+|..+|+++|+...++..+ .+ ........
T Consensus 615 GI~v~miTGD~~~tA~~ia~~lgi~~~~~~~i----------~~----~~~~~~~~------------------------ 656 (1028)
T 2zxe_A 615 GIKVIMVTGDHPITAKAIAKGVGIISEGNETI----------ED----IAARLNIP------------------------ 656 (1028)
T ss_dssp TCEEEEECSSCHHHHHHHHHHHTSSCTTCCCH----------HH----HHHHTTCC------------------------
T ss_pred CCEEEEECCCCHHHHHHHHHHcCCCCCCchhH----------HH----HHhhcCcc------------------------
Confidence 99999999999999999999999975543221 00 11100000
Q ss_pred CCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhcCCCeEEE
Q 041225 414 DAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLA 493 (658)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~~~~~v~a 493 (658)
+... ........+++|.++.....+ .+..+...++..++++.+|.+|..+++.+++. ++.|+|
T Consensus 657 ---~~~~---------~~~~~~~~vi~G~~l~~~~~~----~l~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~-g~~V~~ 719 (1028)
T 2zxe_A 657 ---IGQV---------NPRDAKACVVHGSDLKDLSTE----VLDDILHYHTEIVFARTSPQQKLIIVEGCQRQ-GAIVAV 719 (1028)
T ss_dssp ---GGGS---------CGGGCCEEEEEHHHHTTCCHH----HHHHHHHHCSEEEEESCCHHHHHHHHHHHHHT-TCCEEE
T ss_pred ---hhhc---------cccccceEEEEcHHhhhCCHH----HHHHHHhhCCcEEEEEcCHHHHHHHHHHHHhC-CCEEEE
Confidence 0000 000011234444443222111 22223333445789999999999999999998 679999
Q ss_pred EcCCcCChhhhhhcceeEEecCccchhhhhhcccccccccchHHHHhh-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 041225 494 IGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLV-HGHWNYQRIGYLVLYNFYRNAVFVLMLFWYI 572 (658)
Q Consensus 494 iGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~-~gr~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 572 (658)
+|||.||+|||+.||+||||+.++.+.+|++||+|+.+.++.....++ |||.+|.|+++++.|.++.|+..+++.+++.
T Consensus 720 iGDG~ND~paLk~AdvGIAmg~~gtd~ak~aAD~Vl~~~~~~~I~~~i~~gR~i~~ni~k~i~~~l~~n~~~~~~~~~~~ 799 (1028)
T 2zxe_A 720 TGDGVNDSPALKKADIGVAMGISGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLVFI 799 (1028)
T ss_dssp EECSGGGHHHHHHSSEEEEESSSCCHHHHHHCSEEETTCCTHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHH
T ss_pred EcCCcchHHHHHhCCceEEeCCccCHHHHHhcCEEecCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999994367777999999999998887776655 9999999999999999999999988888877
Q ss_pred HhhccccccchhhHHHHHHHHHHhhhhhhhheecccCCChHHHhhCCccc
Q 041225 573 LFTGFSTTSALTDWSSVFYSLLYTSVPTIVVGIVDKDLSHKTLMQYPKLY 622 (658)
Q Consensus 573 ~~~~~s~~~~~~~~~~~~~n~~~~~~p~~~~~~~~~~~~~~~~~~~p~~y 622 (658)
++ ..+.++++++++|+|++++.+|+++++. +++ .++.+.+.|.-.
T Consensus 800 ~~---~~~~~l~~~qil~inl~~d~~pa~al~~-e~~-~~~~m~~~Pr~~ 844 (1028)
T 2zxe_A 800 IG---NVPLPLGTVTILCIDLGTDMVPAISLAY-EQA-ESDIMKRQPRNP 844 (1028)
T ss_dssp HH---CCCCSSCHHHHHHHHTTTTHHHHHHGGG-CCC-SSCGGGSCCCCT
T ss_pred HH---cccchhHHHHHHHHHHHHHHHHHHHhcc-Ccc-chhhhccCCCCc
Confidence 76 4467899999999999999999999974 442 445555556543
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-56 Score=507.49 Aligned_cols=410 Identities=21% Similarity=0.264 Sum_probs=315.3
Q ss_pred CCeeeeccCCcccccccceEEEeccCcccccceEEEEEEEEcCcccCCchhhHHHHHHHHHhhhccccccccChHHHHHH
Q 041225 24 GSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCGKNYGNSLLLAQQVSAAAVRRWKLKSEISVDSKLMELL 103 (658)
Q Consensus 24 ~~~i~vr~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (658)
++|++||+++++|+||++++||||||||||+|+|+|.+++..+.. . +
T Consensus 355 k~~ilvk~~~aiE~Lg~v~vIc~DKTGTLT~n~m~v~~~~~~~g~-~--------------------------~------ 401 (920)
T 1mhs_A 355 KKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHDPYTVAGV-D--------------------------P------ 401 (920)
T ss_dssp HTTCCCCCTTTHHHHHTCCEEEEETBTTTBSSCSCCCCCBCCSCC-C--------------------------C------
T ss_pred hCCeEEecCchhhhhccCcEEEECCCCCccccceeEEEEeecCCC-C--------------------------H------
Confidence 568999999999999999999999999999999999987643210 0 0
Q ss_pred hhccCcchhHHHHHHHHHHhhccceeecCCCCCCCCCCCCcccCCcceeeecCChhHHHHHHHHHHcCcEEEEEcCCeEE
Q 041225 104 SKDLVGDERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYTLFERTSGHIV 183 (658)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~~~ 183 (658)
.+++++.++|+... ..+.||+|.|+++++.+.+..
T Consensus 402 ------------~~ll~~a~l~~~~~-----------------------~~~~~P~e~Al~~~~~~~~~~---------- 436 (920)
T 1mhs_A 402 ------------EDLMLTACLAASRK-----------------------KKGIDAIDKAFLKSLKYYPRA---------- 436 (920)
T ss_dssp ------------THHHHHHHHSCCCS-----------------------SCSCCSHHHHHHHHHHHSSSC----------
T ss_pred ------------HHHHHHHHHhcCCc-----------------------ccCCChHHHHHHHHHHhcccc----------
Confidence 12456677886421 012399999999999876531
Q ss_pred EEeCCcEEEEEEEEeeCCCCCCCeeEEEEEcCCCcEEEEEeCCchHhHHhhhcCccccHHHHHHHHHHHHHHhhcCCeEE
Q 041225 184 IDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADSSMFNILAKDSKRNDLIRHITQSHLSEYSSQGLRTL 263 (658)
Q Consensus 184 ~~~~g~~~~~~il~~~~F~s~rk~msviv~~~~~~~~l~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l 263 (658)
.+....++++..+||+|.||||+++++.++|...+|+||||+.|+++|......++..++.+.+.+++++.+|+||+
T Consensus 437 ---~~~~~~~~~~~~~pF~s~~k~ms~iv~~~~g~~~~~~KGape~il~~c~~~~~~~~~~~~~~~~~~~~~a~~G~RvL 513 (920)
T 1mhs_A 437 ---KSVLSKYKVLQFHPFDPVSKKVVAVVESPQGERITCVKGAPLFVLKTVEEDHPIPEEVDQAYKNKVAEFATRGFRSL 513 (920)
T ss_dssp ---CGGGSCCCEEEEEEEETTTTEEEEEECCSSSSCEEEEEECHHHHHHHCCCSSCCCHHHHHHHHHHHHHHHTSSCCCC
T ss_pred ---hhhccccceeEEeeccCCCCeEEEEEEeCCCcEEEEEeCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHhCCCEEE
Confidence 01122467788999999999999999988888889999999999999986544566677888999999999999999
Q ss_pred EEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecC
Q 041225 264 VVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGD 343 (658)
Q Consensus 264 ~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr 343 (658)
++|+|.. +.|++++|.++++|++||+++++|++|+++||+++|+|||
T Consensus 514 ~vA~~~~---------------------------------e~~l~~lGli~i~Dp~R~ea~~aI~~l~~aGI~v~MiTGD 560 (920)
T 1mhs_A 514 GVARKRG---------------------------------EGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGD 560 (920)
T ss_dssp EECCCSS---------------------------------SCSCCCCBBCCCCCCCCHHHHHHHHHHHHHTCEEEEEESS
T ss_pred EEEEecc---------------------------------ccccEEEEEEEEeccccccHHHHHHHHhhcCceEEEEcCC
Confidence 9999841 3478999999999999999999999999999999999999
Q ss_pred ChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCC
Q 041225 344 KQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQG 423 (658)
Q Consensus 344 ~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (658)
+..+|..+|+++|+.... + +.. .... .+.
T Consensus 561 ~~~TA~aIA~~lGI~~~~---~--~~~----------------~~~~--~g~---------------------------- 589 (920)
T 1mhs_A 561 AVGIARETSRQLGLGTNI---Y--NAE----------------RLGL--GGG---------------------------- 589 (920)
T ss_dssp CHHHHHHHHHHHTSSCSC---C--CSS----------------SSSS--CBC----------------------------
T ss_pred CHHHHHHHHHHcCCCccc---c--Ccc----------------ceee--cCc----------------------------
Confidence 999999999999995320 0 000 0000 000
Q ss_pred CchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhcCCCeEEEEcCCcCChhh
Q 041225 424 HDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSM 503 (658)
Q Consensus 424 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~~~~~v~aiGDg~NDi~M 503 (658)
.. .+++ .+...+. ...++++++|.+|..+|+.|+++ ++.|+|+|||.||+||
T Consensus 590 ~~-------------~~~~------------el~~~~~--~~~V~arv~P~~K~~iV~~Lq~~-g~~Vam~GDGvNDapa 641 (920)
T 1mhs_A 590 GD-------------MPGS------------EVYDFVE--AADGFAEVFPQHKYNVVEILQQR-GYLVAMTGDGVNDAPS 641 (920)
T ss_dssp CC-------------GGGG------------GGGTTTT--TTSCEESCCSTHHHHHHHHHHTT-TCCCEECCCCGGGHHH
T ss_pred cc-------------CCHH------------HHHHHHh--hCeEEEEeCHHHHHHHHHHHHhC-CCeEEEEcCCcccHHH
Confidence 00 0000 0111111 13478999999999999999998 6899999999999999
Q ss_pred hhhcceeEEecCccchhhhhhcccccccccchHHHHhh-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccc
Q 041225 504 IQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLV-HGHWNYQRIGYLVLYNFYRNAVFVLMLFWYILFTGFSTTSA 582 (658)
Q Consensus 504 l~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~-~gr~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 582 (658)
|+.||+|||| +++.+.++++||+++.+.++.....++ +||.+|+|+++++.|.++.|+.+.+..+++..+.+++
T Consensus 642 Lk~AdvGIAm-g~gtd~ak~aADiVl~~~~~~~I~~ai~~gR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~---- 716 (920)
T 1mhs_A 642 LKKADTGIAV-EGSSDAARSAADIVFLAPGLGAIIDALKTSRQIFHRMYAYVVYRIALSIHLEIFLGLWIAILNRS---- 716 (920)
T ss_dssp HHHSSEEEEE-TTSCHHHHHSSSEEESSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSCC----
T ss_pred HHhCCcCccc-ccccHHHHHhcCeEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc----
Confidence 9999999999 567777999999999999988777666 9999999999999999999998754444444443332
Q ss_pred hhhHHHHHHHHHHhhhhhhhheecccCCChHHHhhCCccccccccchHHHHHHHH
Q 041225 583 LTDWSSVFYSLLYTSVPTIVVGIVDKDLSHKTLMQYPKLYVVQQYLWPSDIQIAR 637 (658)
Q Consensus 583 ~~~~~~~~~n~~~~~~p~~~~~~~~~~~~~~~~~~~p~~y~~~~~~~~~~~~~~~ 637 (658)
+++.+++|.|++.+. |+++++....+.+ +.|..+......|..+++-+.
T Consensus 717 l~~~~il~~~l~~d~-~~lal~~e~~~~~-----~~P~~~~~~~~~~~~~~~g~~ 765 (920)
T 1mhs_A 717 LNIELVVFIAIFADV-ATLAIAYDNAPYS-----QTPVKWNLPKLWGMSVLLGVV 765 (920)
T ss_dssp CCHHHHHHHHHHHTT-HHHHCCCCCSGGG-----GSCCCCCSSSCSSCHHHHHHH
T ss_pred CCHHHHHHHHHHHHH-HhhhhcccCcccc-----cCCCCchHHHHHHHHHHHHHH
Confidence 677888888888776 9999987654322 456666656666655544333
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-54 Score=490.40 Aligned_cols=409 Identities=18% Similarity=0.228 Sum_probs=304.2
Q ss_pred CCCeeeeccCCcccccccceEEEeccCcccccceEEEEEEEEcCcccCCchhhHHHHHHHHHhhhccccccccChHHHHH
Q 041225 23 SGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCGKNYGNSLLLAQQVSAAAVRRWKLKSEISVDSKLMEL 102 (658)
Q Consensus 23 ~~~~i~vr~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (658)
.++|++||+++++|+||++++||||||||||+|+|+|.++.+. .++..
T Consensus 305 ak~~ilvk~~~aiE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~--~~~~~------------------------------ 352 (885)
T 3b8c_A 305 SQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVE--VFCKG------------------------------ 352 (885)
T ss_dssp TTTSCCCSSGGGHHHHTTCCCCEEECCCCCSCCCCCCCSCCCC--SSCSS------------------------------
T ss_pred HhCCeEeCCchHHHHHhCCCEEEECCCCCcccCceEEEEEEEe--ccCCC------------------------------
Confidence 5788999999999999999999999999999999999743211 01000
Q ss_pred HhhccCcchhHHHHHHHHHHhhccceeecCCCCCCCCCCCCcccCCcceeeecCChhHHHHHHHHHHcCcEEEEEcCCeE
Q 041225 103 LSKDLVGDERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYTLFERTSGHI 182 (658)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~~ 182 (658)
....+++...++|+... ++||+|.|+++++.+..
T Consensus 353 ----------~~~~~ll~~aa~~~~~~-------------------------~~~p~~~Al~~~~~~~~----------- 386 (885)
T 3b8c_A 353 ----------VEKDQVLLFAAMASRVE-------------------------NQDAIDAAMVGMLADPK----------- 386 (885)
T ss_dssp ----------TTHHHHHHHHHHHCCSS-------------------------SCCSHHHHHHHTTCCTT-----------
T ss_pred ----------CCHHHHHHHHHHHhCCC-------------------------CCCchHHHHHHHhhchh-----------
Confidence 01124566778887421 35999999999864210
Q ss_pred EEEeCCcEEEEEEEEeeCCCCCCCeeEEEEEcCCCcEEEEEeCCchHhHHhhhcCccccHHHHHHHHHHHHHHhhcCCeE
Q 041225 183 VIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADSSMFNILAKDSKRNDLIRHITQSHLSEYSSQGLRT 262 (658)
Q Consensus 183 ~~~~~g~~~~~~il~~~~F~s~rk~msviv~~~~~~~~l~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~ 262 (658)
.....+++++.+||+|.||||+++++..+|...+|+||||+.|+++|+... ..++.+.+.+++++.+|+||
T Consensus 387 -----~~~~~~~~~~~~pF~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~~~~----~~~~~~~~~~~~~a~~G~rv 457 (885)
T 3b8c_A 387 -----EARAGIREVHFLPFNPVDKRTALTYIDGSGNWHRVSKGAPEQILELAKASN----DLSKKVLSIIDKYAERGLRS 457 (885)
T ss_dssp -----CCCCSSCCBCCCCCCTTTCCCCCBBCSSSSCBCBCCCCSGGGTSSSSCCCS----TTTTTHHHHHHHHTTTTCEE
T ss_pred -----hHhhcCceeecccCCcccceEEEEEEecCCcEEEEEeCCHHHHHHhccCch----hhHHHHHHHHHHHHhCCCeE
Confidence 011235677889999999999999998788888999999999999997422 23445677889999999999
Q ss_pred EEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEec
Q 041225 263 LVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTG 342 (658)
Q Consensus 263 l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TG 342 (658)
+++|++.+++++. ...+.|++++|.++++|++||+++++|++|+++||+++|+||
T Consensus 458 l~vA~~~~~~~~~-------------------------~~~e~~l~~lGli~i~Dp~R~~a~~aI~~l~~aGI~v~MiTG 512 (885)
T 3b8c_A 458 LAVARQVVPEKTK-------------------------ESPGAPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITG 512 (885)
T ss_dssp EEECCBCCCSSSS-------------------------SCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHTTCCCEEEES
T ss_pred EEEEEeccccccc-------------------------cccccCcEEEEEEEeecccchhHHHHHHHHHHcCCcEEEEcC
Confidence 9999998865320 123568999999999999999999999999999999999999
Q ss_pred CChhHHHHHHHHcCccCCC--ccEEEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCC
Q 041225 343 DKQDTAISIALSCKLLTPD--MQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDV 420 (658)
Q Consensus 343 r~~~~a~~ia~~~gl~~~~--~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (658)
|+..+|..+|+++|+.... ...+ .|
T Consensus 513 D~~~tA~~iA~~lGi~~~~~~~~~l--~g--------------------------------------------------- 539 (885)
T 3b8c_A 513 DQLAIGKETGRRLGMGTNMYPSSAL--LG--------------------------------------------------- 539 (885)
T ss_dssp SCHHHHTHHHHTTTCTTCCSTTSSC--CB---------------------------------------------------
T ss_pred CChHHHHHHHHHhCCccccCCccee--ec---------------------------------------------------
Confidence 9999999999999995320 0000 00
Q ss_pred CCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhcCCCeEEEEcCCcCC
Q 041225 421 PQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGAND 500 (658)
Q Consensus 421 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~~~~~v~aiGDg~ND 500 (658)
.+ .+.. .++.++...+. ...++++++|.+|..+|+.++++ ++.|+|+|||.||
T Consensus 540 ---~~---~~~~------~~~~~l~~~~~--------------~~~v~arv~P~~K~~iV~~lq~~-g~~Vam~GDGvND 592 (885)
T 3b8c_A 540 ---TH---KDAN------LASIPVEELIE--------------KADGFAGVFPEHKYEIVKKLQER-KHIVGMTGDGVND 592 (885)
T ss_dssp ---GG---GGTT------SCCSCHHHHHH--------------TSCCEECCCHHHHHHHHHHHHHT-TCCCCBCCCSSTT
T ss_pred ---cc---cccc------cchhHHHHHHh--------------hCcEEEEECHHHHHHHHHHHHHC-CCeEEEEcCCchh
Confidence 00 0000 00111111111 13478999999999999999998 6899999999999
Q ss_pred hhhhhhcceeEEecCccchhhhhhcccccccccchHHHHhh-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 041225 501 VSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLV-HGHWNYQRIGYLVLYNFYRNAVFVLMLFWYILFTGFST 579 (658)
Q Consensus 501 i~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~-~gr~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~s~ 579 (658)
+|||+.||+|||| +++.+.++++||+++.++++.....++ +||.+|+|+++++.|.+..|+..++..++..+ ++
T Consensus 593 apaLk~AdvGIAm-g~gtd~ak~aADivl~~~~~~~I~~ai~~gR~~~~ni~~~i~~~l~~n~~~~~~~~~~~~--~~-- 667 (885)
T 3b8c_A 593 APALKKADIGIAV-ADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLIAL--IW-- 667 (885)
T ss_dssp HHHHHHSSSCCCC-SSSHHHHGGGCSSCCSSCSHHHHTHHHHTHHHHHHHHHHHHHHHHHHTTTTTSTTHHHHS--SC--
T ss_pred HHHHHhCCEeEEe-CCccHHHHHhcceeeccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cc--
Confidence 9999999999999 567777999999999999988777666 99999999999999999999865544444333 22
Q ss_pred ccchhhHHHHHHHHHHhhhhhhhheecccCCChHHHhhCCccccccccchHHHHH
Q 041225 580 TSALTDWSSVFYSLLYTSVPTIVVGIVDKDLSHKTLMQYPKLYVVQQYLWPSDIQ 634 (658)
Q Consensus 580 ~~~~~~~~~~~~n~~~~~~p~~~~~~~~~~~~~~~~~~~p~~y~~~~~~~~~~~~ 634 (658)
+.++++++++|+|++.+..+ +.++. +...+ .+.|.-+......|...+.
T Consensus 668 ~~~l~p~~il~i~l~~d~~~-l~l~~-~~~~~----~~~p~~~~~~~~~~~~~~~ 716 (885)
T 3b8c_A 668 EFDFSAFMVLIIAILNDGTI-MTISK-DRVKP----SPTPDSWKLKEIFATGVVL 716 (885)
T ss_dssp SSCSCHHHHHHHHHHHHTTT-CCCCC-CCCCC----SSCCCSTTTTTTTTTHHHH
T ss_pred CcCcCHHHHHHHHHHHHHHH-Hhhcc-cccCc----ccCCcchhHHHHHHHHHHH
Confidence 34788999999999988775 66653 22211 1345444444444444443
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-40 Score=373.12 Aligned_cols=292 Identities=23% Similarity=0.285 Sum_probs=236.5
Q ss_pred CCCeeeeccCCcccccccceEEEeccCcccccceEEEEEEEEcCcccCCchhhHHHHHHHHHhhhccccccccChHHHHH
Q 041225 23 SGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCGKNYGNSLLLAQQVSAAAVRRWKLKSEISVDSKLMEL 102 (658)
Q Consensus 23 ~~~~i~vr~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (658)
.++||+||+++++|+||++++||||||||||+|+|.|.+++..+.. +
T Consensus 402 a~~gilvk~~~alE~l~~v~~i~fDKTGTLT~g~~~v~~i~~~~~~----------------------------~----- 448 (736)
T 3rfu_A 402 AQSGVLIKNAEALERMEKVNTLVVDKTGTLTEGHPKLTRIVTDDFV----------------------------E----- 448 (736)
T ss_dssp HHTTEEESCHHHHHHHTSCCEEEECCBTTTBCSSCEEEEEEESSSC----------------------------H-----
T ss_pred hhcceeechHHHHHHhcCCCEEEEeCCCCCcCCceEEEEEEecCCC----------------------------H-----
Confidence 3578999999999999999999999999999999999999843311 0
Q ss_pred HhhccCcchhHHHHHHH-HHHhhccceeecCCCCCCCCCCCCcccCCcceeeecCChhHHHHHHHHHHcCcEEEEEcCCe
Q 041225 103 LSKDLVGDERIAAHEFF-LTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYTLFERTSGH 181 (658)
Q Consensus 103 ~~~~~~~~~~~~~~~~~-~~l~lC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~ 181 (658)
.+++ .+.+ ++..++||++.|++++++..|+.+.
T Consensus 449 -------------~~~l~~aa~---------------------------le~~s~hPla~Aiv~~a~~~~~~~~------ 482 (736)
T 3rfu_A 449 -------------DNALALAAA---------------------------LEHQSEHPLANAIVHAAKEKGLSLG------ 482 (736)
T ss_dssp -------------HHHHHHHHH---------------------------HHHSSCCHHHHHHHHHHHTTCCCCC------
T ss_pred -------------HHHHHHHHH---------------------------HhhcCCChHHHHHHHHHHhcCCCcc------
Confidence 0111 1222 2334569999999999998775432
Q ss_pred EEEEeCCcEEEEEEEEeeCCCCCCCeeEEEEEcCCCcEEEEEeCCchHhHHhhhcCccccHHHHHHHHHHHHHHhhcCCe
Q 041225 182 IVIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADSSMFNILAKDSKRNDLIRHITQSHLSEYSSQGLR 261 (658)
Q Consensus 182 ~~~~~~g~~~~~~il~~~~F~s~rk~msviv~~~~~~~~l~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r 261 (658)
...+|++.+++. +.... ++. .+.+|+++.+.+.... ...+.+..++++.+|.|
T Consensus 483 ---------------~~~~f~~~~g~g-v~~~~-~g~--~~~~G~~~~~~~~~~~--------~~~~~~~~~~~~~~G~~ 535 (736)
T 3rfu_A 483 ---------------SVEAFEAPTGKG-VVGQV-DGH--HVAIGNARLMQEHGGD--------NAPLFEKADELRGKGAS 535 (736)
T ss_dssp ---------------CCSCCCCCTTTE-EEECS-SSS--CEEEESHHHHHHHCCC--------CHHHHHHHHHHHHTTCE
T ss_pred ---------------CcccccccCCce-EEEEE-CCE--EEEEcCHHHHHHcCCC--------hhHHHHHHHHHHhcCCe
Confidence 234677666543 22222 222 2456998877654322 12345667889999999
Q ss_pred EEEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEe
Q 041225 262 TLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLT 341 (658)
Q Consensus 262 ~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~T 341 (658)
++++|+ |++++|.++++|+++++++++|++|+++|++++|+|
T Consensus 536 vl~va~--------------------------------------d~~~~G~i~i~D~i~~~~~~aI~~L~~~Gi~v~mlT 577 (736)
T 3rfu_A 536 VMFMAV--------------------------------------DGKTVALLVVEDPIKSSTPETILELQQSGIEIVMLT 577 (736)
T ss_dssp EEEEEE--------------------------------------TTEEEEEEEEECCBCSSHHHHHHHHHHHTCEEEEEC
T ss_pred EEEEEE--------------------------------------CCEEEEEEEeeccchhhHHHHHHHHHHCCCeEEEEC
Confidence 999984 579999999999999999999999999999999999
Q ss_pred cCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCC
Q 041225 342 GDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVP 421 (658)
Q Consensus 342 Gr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (658)
||+..++..+++++|+.
T Consensus 578 Gd~~~~a~~ia~~lgi~--------------------------------------------------------------- 594 (736)
T 3rfu_A 578 GDSKRTAEAVAGTLGIK--------------------------------------------------------------- 594 (736)
T ss_dssp SSCHHHHHHHHHHHTCC---------------------------------------------------------------
T ss_pred CCCHHHHHHHHHHcCCC---------------------------------------------------------------
Confidence 99999999999999972
Q ss_pred CCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhcCCCeEEEEcCCcCCh
Q 041225 422 QGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDV 501 (658)
Q Consensus 422 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~~~~~v~aiGDg~NDi 501 (658)
.++++..|.+|...++.+++. +..|+|+|||.||+
T Consensus 595 --------------------------------------------~v~a~~~P~~K~~~v~~l~~~-g~~V~~vGDG~ND~ 629 (736)
T 3rfu_A 595 --------------------------------------------KVVAEIMPEDKSRIVSELKDK-GLIVAMAGDGVNDA 629 (736)
T ss_dssp --------------------------------------------CEECSCCHHHHHHHHHHHHHH-SCCEEEEECSSTTH
T ss_pred --------------------------------------------EEEEecCHHHHHHHHHHHHhc-CCEEEEEECChHhH
Confidence 146677899999999999998 67899999999999
Q ss_pred hhhhhcceeEEecCccchhhhhhcccccccccchHHHHhh-hhhhHHHHHHHHHHHHHHHHHHHHHH
Q 041225 502 SMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLV-HGHWNYQRIGYLVLYNFYRNAVFVLM 567 (658)
Q Consensus 502 ~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~-~gr~~~~~~~~~i~~~~~~~~~~~~~ 567 (658)
|||+.||+|||| +++.+.++++||+++.+.++.....++ +||..++++++.+.|.+.+|++.+.+
T Consensus 630 paL~~AdvGIAm-g~g~d~a~~~AD~vl~~~~~~~i~~ai~~sr~t~~~i~qnl~~a~~yN~~~ipl 695 (736)
T 3rfu_A 630 PALAKADIGIAM-GTGTDVAIESAGVTLLHGDLRGIAKARRLSESTMSNIRQNLFFAFIYNVLGVPL 695 (736)
T ss_dssp HHHHHSSEEEEE-SSSCSHHHHHCSEEECSCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCEEEEe-CCccHHHHHhCCEEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999 678888999999999988888777666 89999999999999999999976544
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-40 Score=368.76 Aligned_cols=289 Identities=22% Similarity=0.304 Sum_probs=232.9
Q ss_pred CCCeeeeccCCcccccccceEEEeccCcccccceEEEEEEEEcCcccCCchhhHHHHHHHHHhhhccccccccChHHHHH
Q 041225 23 SGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCGKNYGNSLLLAQQVSAAAVRRWKLKSEISVDSKLMEL 102 (658)
Q Consensus 23 ~~~~i~vr~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (658)
.++|++||+++++|+||++++||||||||||+|+|+|.+++..+..
T Consensus 386 a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~~~~~~~~---------------------------------- 431 (723)
T 3j09_A 386 AELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNGD---------------------------------- 431 (723)
T ss_dssp HTTTCEESSTTHHHHGGGCCEEEEEHHHHTSCSCCEEEEEEESSSC----------------------------------
T ss_pred HHCCeEEeChHHHHHhhcCCEEEEcCCCccccCceEEEEEEeCCCC----------------------------------
Confidence 4678999999999999999999999999999999999999876421
Q ss_pred HhhccCcchhHHHHHHHHHHhhccceeecCCCCCCCCCCCCcccCCcceeeecCChhHHHHHHHHHHcCcEEEEEcCCeE
Q 041225 103 LSKDLVGDERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYTLFERTSGHI 182 (658)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~~ 182 (658)
..+++...+.| +..+.||++.|+++++...|+.+....+
T Consensus 432 ------------~~~~l~~aa~~--------------------------e~~s~hP~~~Ai~~~a~~~~~~~~~~~~--- 470 (723)
T 3j09_A 432 ------------ERELLRLAAIA--------------------------ERRSEHPIAEAIVKKALEHGIELGEPEK--- 470 (723)
T ss_dssp ------------HHHHHHHHHHH--------------------------HTTCCSHHHHHHHHHHHHTTCCCCSCCC---
T ss_pred ------------HHHHHHHHHHH--------------------------hccCCCchhHHHHHHHHhcCCCcCCccc---
Confidence 01222333332 2234699999999999998875432221
Q ss_pred EEEeCCcEEEEEEEEeeCCCCCCCeeEEEEEcCCCcEEEEEeCCchHhHHhhhcCccccHHHHHHHHHHHHHHhhcCCeE
Q 041225 183 VIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADSSMFNILAKDSKRNDLIRHITQSHLSEYSSQGLRT 262 (658)
Q Consensus 183 ~~~~~g~~~~~~il~~~~F~s~rk~msviv~~~~~~~~l~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~ 262 (658)
+..+.|.+... ..+..|+++.+.+.... ..+.+...++.++.+|.|+
T Consensus 471 ~~~~~g~g~~~--------------------------~~~~~g~~~~~~~~~~~-------~~~~~~~~~~~~~~~g~~~ 517 (723)
T 3j09_A 471 VEVIAGEGVVA--------------------------DGILVGNKRLMEDFGVA-------VSNEVELALEKLEREAKTA 517 (723)
T ss_dssp CEEETTTEEEE--------------------------TTEEEECHHHHHHTTCC-------CCHHHHHHHHHHHTTTCEE
T ss_pred eEEecCCceEE--------------------------EEEEECCHHHHHhcCCC-------ccHHHHHHHHHHHhcCCeE
Confidence 22333443221 12456777665443221 1245667788999999999
Q ss_pred EEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEec
Q 041225 263 LVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTG 342 (658)
Q Consensus 263 l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TG 342 (658)
+++++ |++++|.++++|+++++++++|++|+++|++++|+||
T Consensus 518 ~~va~--------------------------------------~~~~~G~i~i~D~~~~~~~~~i~~l~~~Gi~v~~~TG 559 (723)
T 3j09_A 518 VIVAR--------------------------------------NGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITG 559 (723)
T ss_dssp EEEEE--------------------------------------TTEEEEEEEEECCSCTTHHHHHHHHHHTTCEEEEECS
T ss_pred EEEEE--------------------------------------CCEEEEEEeecCCcchhHHHHHHHHHHCCCEEEEECC
Confidence 99985 5799999999999999999999999999999999999
Q ss_pred CChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCC
Q 041225 343 DKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQ 422 (658)
Q Consensus 343 r~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (658)
|+..++..+++++|+.
T Consensus 560 d~~~~a~~ia~~lgi~---------------------------------------------------------------- 575 (723)
T 3j09_A 560 DNWRSAEAISRELNLD---------------------------------------------------------------- 575 (723)
T ss_dssp SCHHHHHHHHHHHTCS----------------------------------------------------------------
T ss_pred CCHHHHHHHHHHcCCc----------------------------------------------------------------
Confidence 9999999999999972
Q ss_pred CCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhcCCCeEEEEcCCcCChh
Q 041225 423 GHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVS 502 (658)
Q Consensus 423 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~~~~~v~aiGDg~NDi~ 502 (658)
.++++..|.+|+.+++.++++ +.|+|+|||.||+|
T Consensus 576 -------------------------------------------~~~~~~~P~~K~~~v~~l~~~--~~v~~vGDg~ND~~ 610 (723)
T 3j09_A 576 -------------------------------------------LVIAEVLPHQKSEEVKKLQAK--EVVAFVGDGINDAP 610 (723)
T ss_dssp -------------------------------------------EEECSCCTTCHHHHHHHHTTT--CCEEEEECSSTTHH
T ss_pred -------------------------------------------EEEccCCHHHHHHHHHHHhcC--CeEEEEECChhhHH
Confidence 256778899999999999986 78999999999999
Q ss_pred hhhhcceeEEecCccchhhhhhcccccccccchHHHHhh-hhhhHHHHHHHHHHHHHHHHHHHHHH
Q 041225 503 MIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLV-HGHWNYQRIGYLVLYNFYRNAVFVLM 567 (658)
Q Consensus 503 Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~-~gr~~~~~~~~~i~~~~~~~~~~~~~ 567 (658)
||+.||+|||| +++.+.++++||+++.+.++.....++ +||..++++++.+.|.+.+|++.+.+
T Consensus 611 al~~A~vgiam-g~g~~~a~~~AD~vl~~~~~~~i~~~i~~~r~~~~~i~~nl~~a~~~n~~~i~~ 675 (723)
T 3j09_A 611 ALAQADLGIAV-GSGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQNIFWALIYNVILIPA 675 (723)
T ss_dssp HHHHSSEEEEC-CCCSCCSSCCSSEECSSCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhhCCEEEEe-CCCcHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999 577778999999999888887777665 89999999999999999999985443
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-39 Score=362.50 Aligned_cols=289 Identities=22% Similarity=0.302 Sum_probs=232.3
Q ss_pred CCCeeeeccCCcccccccceEEEeccCcccccceEEEEEEEEcCcccCCchhhHHHHHHHHHhhhccccccccChHHHHH
Q 041225 23 SGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCGKNYGNSLLLAQQVSAAAVRRWKLKSEISVDSKLMEL 102 (658)
Q Consensus 23 ~~~~i~vr~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (658)
.++|++||+++++|+||++++||||||||||+|+|+|.+++..+..
T Consensus 308 a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~~~~~~~~---------------------------------- 353 (645)
T 3j08_A 308 AELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNGD---------------------------------- 353 (645)
T ss_dssp HTTCCCCSSTTHHHHGGGCCEEEEEGGGTSSSSCCEEEEEEESSSC----------------------------------
T ss_pred HHCCeEecCchHHHHhhCCCEEEEcCcccccCCCeEEEEEEeCCCC----------------------------------
Confidence 4679999999999999999999999999999999999999876421
Q ss_pred HhhccCcchhHHHHHHHHHHhhccceeecCCCCCCCCCCCCcccCCcceeeecCChhHHHHHHHHHHcCcEEEEEcCCeE
Q 041225 103 LSKDLVGDERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYTLFERTSGHI 182 (658)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~~ 182 (658)
..+++...+.|. ..+.||++.|+++++...|+......+
T Consensus 354 ------------~~~~l~~aa~~e--------------------------~~s~hPla~Aiv~~a~~~g~~~~~~~~--- 392 (645)
T 3j08_A 354 ------------ERELLRLAAIAE--------------------------RRSEHPIAEAIVKKALEHGIELGEPEK--- 392 (645)
T ss_dssp ------------HHHHHHHHHHHH--------------------------TTCCSHHHHHHHHHHHHTTCCCCSCCC---
T ss_pred ------------HHHHHHHHHHHh--------------------------hcCCChhHHHHHHHHHhcCCCcCCccc---
Confidence 012233333332 234699999999999998875432221
Q ss_pred EEEeCCcEEEEEEEEeeCCCCCCCeeEEEEEcCCCcEEEEEeCCchHhHHhhhcCccccHHHHHHHHHHHHHHhhcCCeE
Q 041225 183 VIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADSSMFNILAKDSKRNDLIRHITQSHLSEYSSQGLRT 262 (658)
Q Consensus 183 ~~~~~g~~~~~~il~~~~F~s~rk~msviv~~~~~~~~l~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~ 262 (658)
+....|.+... ..+..|+++.+.+.... ..+.+...++.++.+|.|+
T Consensus 393 ~~~~~g~g~~~--------------------------~~v~~g~~~~~~~~~~~-------~~~~~~~~~~~~~~~g~~~ 439 (645)
T 3j08_A 393 VEVIAGEGVVA--------------------------DGILVGNKRLMEDFGVA-------VSNEVELALEKLEREAKTA 439 (645)
T ss_dssp CEEETTTEEEE--------------------------TTEEEECHHHHHHTTCC-------CCHHHHHHHHHHHTTTCCC
T ss_pred eEEecCCceEE--------------------------EEEEECCHHHHHhcCCC-------ccHHHHHHHHHHHhcCCeE
Confidence 22333433221 12456776655432221 1245667788899999999
Q ss_pred EEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEec
Q 041225 263 LVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTG 342 (658)
Q Consensus 263 l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TG 342 (658)
+++++ |++++|.++++|+++++++++|++|+++|++++|+||
T Consensus 440 l~va~--------------------------------------~~~~~G~i~~~D~l~~~~~~~i~~L~~~Gi~v~~~TG 481 (645)
T 3j08_A 440 VIVAR--------------------------------------NGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITG 481 (645)
T ss_dssp EEEEE--------------------------------------TTEEEEEEEEECCCTTTHHHHHHHHHHTTCEEEEECS
T ss_pred EEEEE--------------------------------------CCEEEEEEEecCCchhHHHHHHHHHHHCCCEEEEEeC
Confidence 99985 5789999999999999999999999999999999999
Q ss_pred CChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCC
Q 041225 343 DKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQ 422 (658)
Q Consensus 343 r~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (658)
|+..++..+++++|+.
T Consensus 482 d~~~~a~~ia~~lgi~---------------------------------------------------------------- 497 (645)
T 3j08_A 482 DNWRSAEAISRELNLD---------------------------------------------------------------- 497 (645)
T ss_dssp SCHHHHHHHHHHHTCS----------------------------------------------------------------
T ss_pred CCHHHHHHHHHHcCCC----------------------------------------------------------------
Confidence 9999999999999972
Q ss_pred CCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhcCCCeEEEEcCCcCChh
Q 041225 423 GHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVS 502 (658)
Q Consensus 423 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~~~~~v~aiGDg~NDi~ 502 (658)
.++++..|.+|+.+++.++++ +.|+|+|||.||++
T Consensus 498 -------------------------------------------~~~~~~~P~~K~~~v~~l~~~--~~v~~vGDg~ND~~ 532 (645)
T 3j08_A 498 -------------------------------------------LVIAEVLPHQKSEEVKKLQAK--EVVAFVGDGINDAP 532 (645)
T ss_dssp -------------------------------------------EEECSCCTTCHHHHHHHHTTT--CCEEEEECSSSCHH
T ss_pred -------------------------------------------EEEEeCCHHhHHHHHHHHhhC--CeEEEEeCCHhHHH
Confidence 256777899999999999987 78999999999999
Q ss_pred hhhhcceeEEecCccchhhhhhcccccccccchHHHHhh-hhhhHHHHHHHHHHHHHHHHHHHHHH
Q 041225 503 MIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLV-HGHWNYQRIGYLVLYNFYRNAVFVLM 567 (658)
Q Consensus 503 Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~-~gr~~~~~~~~~i~~~~~~~~~~~~~ 567 (658)
||+.||+|||| +++.+.++++||+++.+.++.....++ +||..++++++.+.|.+.+|++.+.+
T Consensus 533 al~~A~vgiam-g~g~~~a~~~AD~vl~~~~~~~i~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~l 597 (645)
T 3j08_A 533 ALAQADLGIAV-GSGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQNIFWALIYNVILIPA 597 (645)
T ss_dssp HHHHSSEEEEE-CCCSCCSSCCSSSEESSCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCEEEEe-CCCcHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999 577778999999999888877776655 89999999999999999999985443
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=2.2e-27 Score=236.66 Aligned_cols=142 Identities=22% Similarity=0.325 Sum_probs=112.4
Q ss_pred hhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHH
Q 041225 302 LIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLAD 381 (658)
Q Consensus 302 ~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~ 381 (658)
+...++.+++.+.+.+++.|++.++|+.|+++|++++|+||++...+..+++.+|+...
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~--------------------- 178 (263)
T 2yj3_A 120 AVYINGEPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQEY--------------------- 178 (263)
Confidence 44567788888888999999999999999999999999999999999999998886211
Q ss_pred HHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhc
Q 041225 382 AKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLAT 461 (658)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~ 461 (658)
T Consensus 179 -------------------------------------------------------------------------------- 178 (263)
T 2yj3_A 179 -------------------------------------------------------------------------------- 178 (263)
Confidence
Q ss_pred cCCeeEEEEcCcccHHHHHHHHHhcCCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhcccccccccchHHHHhh
Q 041225 462 SCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLV 541 (658)
Q Consensus 462 s~~~~i~~~~~~~~K~~~v~~L~~~~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~ 541 (658)
+....|..|..+++.+... ++++++||||.||++|++.||+||++ ++....++..||+++.+.++...+.++
T Consensus 179 ------f~~~~p~~k~~~~~~l~~~-~~~~~~VGD~~~D~~aa~~Agv~va~-g~~~~~~~~~ad~v~~~~~l~~l~~~l 250 (263)
T 2yj3_A 179 ------YSNLSPEDKVRIIEKLKQN-GNKVLMIGDGVNDAAALALADVSVAM-GNGVDISKNVADIILVSNDIGTLLGLI 250 (263)
Confidence 1112266788888888776 57899999999999999999999999 455556788899999444443333333
Q ss_pred -hhhhHHHHHHH
Q 041225 542 -HGHWNYQRIGY 552 (658)
Q Consensus 542 -~gr~~~~~~~~ 552 (658)
.+|..+++++.
T Consensus 251 ~~~r~~~~~i~~ 262 (263)
T 2yj3_A 251 KNRKRLSNAIPS 262 (263)
Confidence 68887777654
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.91 E-value=1.2e-23 Score=212.78 Aligned_cols=274 Identities=23% Similarity=0.283 Sum_probs=185.0
Q ss_pred CCCCeeeeccCCcccccccceEEEeccCcccccceEEEEEEEEcCcccCCchhhHHHHHHHHHhhhccccccccChHHHH
Q 041225 22 SSGSRFQCRTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCGKNYGNSLLLAQQVSAAAVRRWKLKSEISVDSKLME 101 (658)
Q Consensus 22 ~~~~~i~vr~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (658)
..++||++|+++++|+|+++++||||||||||.+.+.+..++..+. . .
T Consensus 13 ~~~~gilik~~~~le~l~~i~~viFD~dGTL~ds~~~~~~~~~~~~--~-~----------------------------- 60 (287)
T 3a1c_A 13 GAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNG--D-E----------------------------- 60 (287)
T ss_dssp -CCCCEEECSTTHHHHHHHCCEEEEECCCCCBCSCCEEEEEEESSS--C-H-----------------------------
T ss_pred HHHCCEEEeCcHHHHHhhcCCEEEEeCCCCCcCCCEEEEEEEeCCC--C-H-----------------------------
Confidence 4578999999999999999999999999999999999998876542 0 0
Q ss_pred HHhhccCcchhHHHHHHHHHHhhccceeecCCCCCCCCCCCCcccCCcceeeecCChhHHHHHHHHHHcCcEEEEEcCCe
Q 041225 102 LLSKDLVGDERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYTLFERTSGH 181 (658)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~ 181 (658)
.+++. +|.. ++..+.||.+.|+.++++..|+.......
T Consensus 61 --------------~~~l~---~~~~-----------------------~e~~s~hp~~~a~~~~~~~~g~~~~~~~~-- 98 (287)
T 3a1c_A 61 --------------RELLR---LAAI-----------------------AERRSEHPIAEAIVKKALEHGIELGEPEK-- 98 (287)
T ss_dssp --------------HHHHH---HHHH-----------------------HTTTCCSHHHHHHHHHHHHTTCCCCCCSC--
T ss_pred --------------HHHHH---HHHH-----------------------HhhcCCCHHHHHHHHHHHhcCCCcccccc--
Confidence 01111 1211 11234699999999999998875321111
Q ss_pred EEEEeCCcEEEEEEEEeeCCCCCCCeeEEEEEcCCCcEEEEEeCCchHhHHhhhcCccccHHHHHHHHHHHHHHhhcCCe
Q 041225 182 IVIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADSSMFNILAKDSKRNDLIRHITQSHLSEYSSQGLR 261 (658)
Q Consensus 182 ~~~~~~g~~~~~~il~~~~F~s~rk~msviv~~~~~~~~l~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r 261 (658)
+....|.+... ..+.+|.++.+.+..... .+.+....+.+..+|.+
T Consensus 99 -~~~~~G~~~~~--------------------------~~~~~g~~~~~~~~~~~~-------~~~~~~~~~~~~~~g~~ 144 (287)
T 3a1c_A 99 -VEVIAGEGVVA--------------------------DGILVGNKRLMEDFGVAV-------SNEVELALEKLEREAKT 144 (287)
T ss_dssp -EEEETTTEEEE--------------------------TTEEEECHHHHHHTTCCC-------CHHHHHHHHHHHHTTCE
T ss_pred -ceeecCCCeEE--------------------------EEEEECCHHHHHhcCCCc-------cHHHHHHHHHHHhCCCe
Confidence 22333433211 012345443322111100 01234445667778888
Q ss_pred EEEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEe
Q 041225 262 TLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLT 341 (658)
Q Consensus 262 ~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~T 341 (658)
++.++ .|+++++......++.|++.++|+.|+++|++++++|
T Consensus 145 ~i~~~--------------------------------------~d~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T 186 (287)
T 3a1c_A 145 AVIVA--------------------------------------RNGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMIT 186 (287)
T ss_dssp EEEEE--------------------------------------ETTEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEEC
T ss_pred EEEEE--------------------------------------ECCEEEEEEEeccccchhHHHHHHHHHHCCCeEEEEe
Confidence 87766 4577888776678999999999999999999999999
Q ss_pred cCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCC
Q 041225 342 GDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVP 421 (658)
Q Consensus 342 Gr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (658)
|++...+..+++.+|+...
T Consensus 187 ~~~~~~~~~~l~~~gl~~~------------------------------------------------------------- 205 (287)
T 3a1c_A 187 GDNWRSAEAISRELNLDLV------------------------------------------------------------- 205 (287)
T ss_dssp SSCHHHHHHHHHHHTCSEE-------------------------------------------------------------
T ss_pred CCCHHHHHHHHHHhCCcee-------------------------------------------------------------
Confidence 9999999999988886210
Q ss_pred CCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhcCCCeEEEEcCCcCCh
Q 041225 422 QGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDV 501 (658)
Q Consensus 422 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~~~~~v~aiGDg~NDi 501 (658)
+....|..|..+++.+... +++++|||+.||+
T Consensus 206 ----------------------------------------------f~~i~~~~K~~~~~~l~~~--~~~~~vGDs~~Di 237 (287)
T 3a1c_A 206 ----------------------------------------------IAEVLPHQKSEEVKKLQAK--EVVAFVGDGINDA 237 (287)
T ss_dssp ----------------------------------------------ECSCCTTCHHHHHHHHTTT--CCEEEEECTTTCH
T ss_pred ----------------------------------------------eeecChHHHHHHHHHHhcC--CeEEEEECCHHHH
Confidence 1112256898888888765 7899999999999
Q ss_pred hhhhhcceeEEecCccchhhhhhcccccccccchHHHH-hhhhhhHHHHHH
Q 041225 502 SMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLL-LVHGHWNYQRIG 551 (658)
Q Consensus 502 ~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~-l~~gr~~~~~~~ 551 (658)
+|.+.||++|++ ++.....+..||+++.+.++...+- +..+|..+.+++
T Consensus 238 ~~a~~ag~~v~~-~~~~~~~~~~ad~v~~~~~~~~l~~~l~~~~~~~~~i~ 287 (287)
T 3a1c_A 238 PALAQADLGIAV-GSGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIK 287 (287)
T ss_dssp HHHHHSSEEEEE-CCCSCCSSCCSSEEESSSCTHHHHHHHHTTC-------
T ss_pred HHHHHCCeeEEe-CCCCHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHhhC
Confidence 999999999999 4444456778999994333333332 347888777653
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=9.4e-22 Score=198.23 Aligned_cols=275 Identities=24% Similarity=0.292 Sum_probs=181.4
Q ss_pred eccCCcccccccceEEEeccCcccccceEEEEEEEEcCcccCCchhhHHHHHHHHHhhhccccccccChHHHHHHhhccC
Q 041225 29 CRTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCGKNYGNSLLLAQQVSAAAVRRWKLKSEISVDSKLMELLSKDLV 108 (658)
Q Consensus 29 vr~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (658)
+|++.++|.|++++.||||+|||||.|+|.|.++...+. .
T Consensus 1 ~k~~~~~e~~~~ik~i~FD~DGTL~d~~~~v~~~~~~~~--~-------------------------------------- 40 (280)
T 3skx_A 1 MRDRQAFERAKDLQAVIFDKTGTLTEGRFGVTDIVGFNH--S-------------------------------------- 40 (280)
T ss_dssp ----CHHHHGGGCCEEEEECCCCCEEEEEEEEEEEESSS--C--------------------------------------
T ss_pred CCChHHHHHhcCCCEEEEeCCCcCCCCcEEEEEEEecCC--C--------------------------------------
Confidence 589999999999999999999999999999999876543 1
Q ss_pred cchhHHHHHHHHHHhhccceeecCCCCCCCCCCCCcccCCcceeeecCChhHHHHHHHHHHcCcEEEEEcCCeEEEEeCC
Q 041225 109 GDERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYTLFERTSGHIVIDING 188 (658)
Q Consensus 109 ~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~~~~~~~g 188 (658)
..+++..++.+ +..+.+|...++.+++...|+.... ........|
T Consensus 41 ------~~~~~~~~~~~--------------------------~~~s~~~~~~a~~~~~~~~g~~~~~---~~~~~~~~g 85 (280)
T 3skx_A 41 ------EDELLQIAASL--------------------------EARSEHPIAAAIVEEAEKRGFGLTE---VEEFRAIPG 85 (280)
T ss_dssp ------HHHHHHHHHHH--------------------------HTTCCSHHHHHHHHHHHHTTCCCCC---CEEEEEETT
T ss_pred ------HHHHHHHHHHh--------------------------hccCCCHHHHHHHHHHHhcCCCCCC---ccceeecCC
Confidence 01122222221 1223588999999999998865321 112233344
Q ss_pred cEEEEEEEEeeCCCCCCCeeEEEEEcCCCcEEEEEeCCchHhHHhhhcCccccHHHHHHHHHHHHHHhhcCCeEEEEEEe
Q 041225 189 EGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADSSMFNILAKDSKRNDLIRHITQSHLSEYSSQGLRTLVVASR 268 (658)
Q Consensus 189 ~~~~~~il~~~~F~s~rk~msviv~~~~~~~~l~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~k 268 (658)
.+....+ ++ ..+..|.++.+........ .....+...|.+++..+
T Consensus 86 ~~~~~~~--------------------~~--~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~-- 130 (280)
T 3skx_A 86 KGVEGIV--------------------NG--RRYMVVSPGYIRELGIKTD-----------ESVEKLKQQGKTVVFIL-- 130 (280)
T ss_dssp TEEEEEE--------------------TT--EEEEEECHHHHHHTTCCCC-----------TTHHHHHTTTCEEEEEE--
T ss_pred CEEEEEE--------------------CC--EEEEEecHHHHHHcCCCch-----------HHHHHHHhCCCeEEEEE--
Confidence 4332211 11 1122344444433222111 12334556677766555
Q ss_pred cCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHH
Q 041225 269 DLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTA 348 (658)
Q Consensus 269 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a 348 (658)
.++.+++...+.+++.|++.++++.|+++|++++++||++...+
T Consensus 131 ------------------------------------~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~ 174 (280)
T 3skx_A 131 ------------------------------------KNGEVSGVIALADRIRPESREAISKLKAIGIKCMMLTGDNRFVA 174 (280)
T ss_dssp ------------------------------------ETTEEEEEEEEEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHH
T ss_pred ------------------------------------ECCEEEEEEEecCCCCHhHHHHHHHHHHCCCEEEEEeCCCHHHH
Confidence 35678888888889999999999999999999999999999999
Q ss_pred HHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhh
Q 041225 349 ISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKE 428 (658)
Q Consensus 349 ~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (658)
..+++.+|+..
T Consensus 175 ~~~~~~~gl~~--------------------------------------------------------------------- 185 (280)
T 3skx_A 175 KWVAEELGLDD--------------------------------------------------------------------- 185 (280)
T ss_dssp HHHHHHHTCSE---------------------------------------------------------------------
T ss_pred HHHHHHcCChh---------------------------------------------------------------------
Confidence 99999888721
Q ss_pred hhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhcCCCeEEEEcCCcCChhhhhhcc
Q 041225 429 VAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMAD 508 (658)
Q Consensus 429 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~~~~~v~aiGDg~NDi~Ml~~A~ 508 (658)
.+....+.+|+..++.+.+. .++++||||.||++|++.||
T Consensus 186 --------------------------------------~f~~~~~~~k~~~~k~~~~~--~~~~~vGD~~nDi~~~~~Ag 225 (280)
T 3skx_A 186 --------------------------------------YFAEVLPHEKAEKVKEVQQK--YVTAMVGDGVNDAPALAQAD 225 (280)
T ss_dssp --------------------------------------EECSCCGGGHHHHHHHHHTT--SCEEEEECTTTTHHHHHHSS
T ss_pred --------------------------------------HhHhcCHHHHHHHHHHHHhc--CCEEEEeCCchhHHHHHhCC
Confidence 12233456899999999886 47899999999999999999
Q ss_pred eeEEecCccchhhhhhcccccccccchHHHHhh-hhhhHHHHHHHHHHHHHH
Q 041225 509 VGVGICGQEGRQAVMASDFAMGQFRFLKRLLLV-HGHWNYQRIGYLVLYNFY 559 (658)
Q Consensus 509 vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~-~gr~~~~~~~~~i~~~~~ 559 (658)
+||+| +++...++..||+++...+......++ .+|..+.+++..+.|++.
T Consensus 226 ~~va~-~~~~~~~~~~a~~~~~~~~~~~l~~~l~~~~~~~~~~~~n~~~~~~ 276 (280)
T 3skx_A 226 VGIAI-GAGTDVAVETADIVLVRNDPRDVAAIVELSRKTYSKFHGLSAWSHP 276 (280)
T ss_dssp EEEEC-SCCSSSCCCSSSEECSSCCTHHHHHHHHHHHTCCC-----------
T ss_pred ceEEe-cCCcHHHHhhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999 666667889999998655554444444 678877777777666653
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=99.86 E-value=2.6e-22 Score=202.40 Aligned_cols=229 Identities=17% Similarity=0.180 Sum_probs=152.6
Q ss_pred HHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccC----------------CCc
Q 041225 299 TAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLT----------------PDM 362 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~----------------~~~ 362 (658)
+++++|+||||++. +..+++.+.++|++++++|++++++|||++..+..+...+++.. ..+
T Consensus 6 kli~fDlDGTLl~~---~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~~nGa~i~~~~~~ 82 (279)
T 4dw8_A 6 KLIVLDLDGTLTNS---KKEISSRNRETLIRIQEQGIRLVLASGRPTYGIVPLANELRMNEFGGFILSYNGGEIINWESK 82 (279)
T ss_dssp CEEEECCCCCCSCT---TSCCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTGGGTTCEEEEGGGTEEEETTTC
T ss_pred eEEEEeCCCCCCCC---CCccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHhCCCCCCCEEEEeCCeEEEECCCC
Confidence 45789999999997 55899999999999999999999999999999999999888621 133
Q ss_pred cEEEEcCCCHHHHHHHHHHHHHhcCcccCcccccccccc-chhHH-HHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEe
Q 041225 363 QQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLK-RSAEI-EYLAISNDAKFSDVPQGHDVKEVAAIASLALIID 440 (658)
Q Consensus 363 ~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 440 (658)
+.+.....+.+.+.++++.+++. +...........+.. ..... ..........+........ .......++. +..
T Consensus 83 ~~~~~~~l~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ki~-~~~ 159 (279)
T 4dw8_A 83 EMMYENVLPNEVVPVLYECARTN-HLSILTYDGAEIVTENSLDPYVQKEAFLNKMAIRETNDFLT-DITLPVAKCL-IVG 159 (279)
T ss_dssp CEEEECCCCGGGHHHHHHHHHHT-TCEEEEEETTEEEESCTTCHHHHHHHHHHTCEEEECSCHHH-HSCSCCSCEE-EES
T ss_pred eEEEEecCCHHHHHHHHHHHHHc-CCEEEEEECCEEEEeCCCCHHHHHHhhhcCCCcccHHHHHH-hhcCCceEEE-EeC
Confidence 44555667888899999888764 111111111111111 01111 1111111111111111000 0012233443 333
Q ss_pred CccHHHHHHHhhHHhh---hhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEec
Q 041225 441 GNSLVYILEKDLESDL---FDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGIC 514 (658)
Q Consensus 441 ~~~~~~~~~~~~~~~~---~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~ 514 (658)
..+....+.+.+...+ ..++.+.+..+++.+.+.+|+.+++.++++ +++++++||||.||++|++.||+||||
T Consensus 160 ~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam- 238 (279)
T 4dw8_A 160 DAGKLIPVESELCIRLQGKINVFRSEPYFLELVPQGIDKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAM- 238 (279)
T ss_dssp CHHHHHHHHHHHHHHTTTTCEEEEEETTEEEEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC-
T ss_pred CHHHHHHHHHHHHHHhcCCEEEEEcCCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEc-
Confidence 4333333333333322 345556677899999999999999999988 668899999999999999999999999
Q ss_pred Cccchhhhhhcccccccccc
Q 041225 515 GQEGRQAVMASDFAMGQFRF 534 (658)
Q Consensus 515 ~~~~~~~k~~AD~vl~~~~~ 534 (658)
+|+.+.+|++||+|+.+.+-
T Consensus 239 ~na~~~~k~~A~~v~~~~~e 258 (279)
T 4dw8_A 239 GNAQEPVKKAADYITLTNDE 258 (279)
T ss_dssp TTSCHHHHHHCSEECCCGGG
T ss_pred CCCcHHHHHhCCEEcCCCCC
Confidence 77888899999999977643
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.4e-21 Score=197.35 Aligned_cols=230 Identities=14% Similarity=0.131 Sum_probs=153.5
Q ss_pred HHHhhhccceeeecccccc-ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc----C-------CCccEEE
Q 041225 299 TAALIECDLTLLGATGIED-KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL----T-------PDMQQII 366 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~d-~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~----~-------~~~~~i~ 366 (658)
+++++|+||||++. .. .+++.+.++|++++++|++++++|||++..+..+...+++. . ..++.+.
T Consensus 22 kli~~DlDGTLl~~---~~~~i~~~~~~al~~l~~~G~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~ 98 (283)
T 3dao_A 22 KLIATDIDGTLVKD---GSLLIDPEYMSVIDRLIDKGIIFVVCSGRQFSSEFKLFAPIKHKLLYITDGGTVVRTPKEILK 98 (283)
T ss_dssp CEEEECCBTTTBST---TCSCCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHTGGGGGGCEEEETTTTEEECSSCEEE
T ss_pred eEEEEeCcCCCCCC---CCCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCcEEEECCCcEEEECCEEEE
Confidence 56789999999986 55 79999999999999999999999999999999888776642 1 1345556
Q ss_pred EcCCCHHHHHHHHHHHHHh-cCcccCccccccccccc-hhH-HHHHHhhcCCCCCCCCCCCchhhh--hccCcEEEEEeC
Q 041225 367 INGNSEEECKDLLADAKAR-YGVKSSNRTKCNSKLKR-SAE-IEYLAISNDAKFSDVPQGHDVKEV--AAIASLALIIDG 441 (658)
Q Consensus 367 ~~g~~~~~~~~ii~~~~~~-~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~ 441 (658)
....+.+.++++++.+.+. .............+... ... ................ ..... ....++.++.+.
T Consensus 99 ~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~l~~l~~~~~~ki~i~~~~ 175 (283)
T 3dao_A 99 TYPMDEDIWKGMCRMVRDELPACDYFAATPDFCFAEDGGSPIFHLLRDSYGFEMREVD---DITRLDRNDIIKFTVFHPD 175 (283)
T ss_dssp ECCCCHHHHHHHHHHHHHHCTTCEEEEECSSCEEESCTTSHHHHHHHHTSCCCEEECS---CGGGCCCSCCCEEEEECSS
T ss_pred EecCCHHHHHHHHHHHHHhcCCceEEEEeCCeEEEeCCCHHHHHHHHHhhcCCceEcC---CHHHcCccCceEEEEEcCh
Confidence 6677889999999888765 12211111111111111 111 1112111111111111 11111 223344443233
Q ss_pred ccHHHHHHHhhHHhh---hhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecC
Q 041225 442 NSLVYILEKDLESDL---FDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICG 515 (658)
Q Consensus 442 ~~~~~~~~~~~~~~~---~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~ 515 (658)
..... +.+.+...+ ..++.+.+..+++.+.+.+|+.+++.++++ +.++|++|||+.||++|++.||+|||| +
T Consensus 176 ~~~~~-~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~~vam-~ 253 (283)
T 3dao_A 176 KCEEL-CTPVFIPAWNKKAHLAAAGKEWVDCNAKGVSKWTALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGISYAV-S 253 (283)
T ss_dssp CHHHH-HTTTHHHHHTTTEEEEEETTTEEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEE-T
T ss_pred HHHHH-HHHHHHHHhcCCEEEEEecCceEEEeeCCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCEEEc-C
Confidence 33322 222232222 345667778899999999999999999988 568899999999999999999999999 7
Q ss_pred ccchhhhhhcccccccccchH
Q 041225 516 QEGRQAVMASDFAMGQFRFLK 536 (658)
Q Consensus 516 ~~~~~~k~~AD~vl~~~~~l~ 536 (658)
|+.+.+|++||+|+.+.+--.
T Consensus 254 na~~~~k~~A~~v~~s~~edG 274 (283)
T 3dao_A 254 NARQEVIAAAKHTCAPYWENG 274 (283)
T ss_dssp TSCHHHHHHSSEEECCGGGTH
T ss_pred CCCHHHHHhcCeECCCCCCCh
Confidence 778889999999988765533
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.86 E-value=8.4e-22 Score=198.65 Aligned_cols=228 Identities=18% Similarity=0.160 Sum_probs=136.1
Q ss_pred HHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccC---------------CCcc
Q 041225 299 TAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLT---------------PDMQ 363 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~---------------~~~~ 363 (658)
+.+++|+||||++. +..+++.+.++|++++++|++++++|||++..+..+...+|+.. ..++
T Consensus 6 kli~~DlDGTLl~~---~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~~nGai~~~~~~~ 82 (279)
T 3mpo_A 6 KLIAIDIDGTLLNE---KNELAQATIDAVQAAKAQGIKVVLCTGRPLTGVQPYLDAMDIDGDDQYAITFNGSVAQTISGK 82 (279)
T ss_dssp CEEEECC--------------CHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCCSSSCEEEEGGGTEEEETTSC
T ss_pred EEEEEcCcCCCCCC---CCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCEEEEcCcEEEECCCCC
Confidence 45789999999998 55899999999999999999999999999999999999988753 2344
Q ss_pred EEEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccch--hHHHHHH-hhcCCCCCCCCCCCchhhhhccCcEEEEEe
Q 041225 364 QIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRS--AEIEYLA-ISNDAKFSDVPQGHDVKEVAAIASLALIID 440 (658)
Q Consensus 364 ~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 440 (658)
.+.....+.+.++++++.+++. +...........+.... ....... ........ ..............++.+ ..
T Consensus 83 ~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ki~~-~~ 159 (279)
T 3mpo_A 83 VLTNHSLTYEDYIDLEAWARKV-RAHFQIETPDYIYTANKDISAYTIAESYLVRMLIQ-YREVSETPRDLTISKAMF-VD 159 (279)
T ss_dssp EEEECCCCHHHHHHHHHHHHHT-TCCEEEECSSCEEECCSBCCHHHHHHHHHHTCCEE-ECCGGGSCTTCCCCEEEE-EC
T ss_pred EEEecCCCHHHHHHHHHHHHHc-CCeEEEEECCEEEEcCCcchHHHHHHhhccCCcce-ecCHHHhhccCCcEEEEE-cC
Confidence 5556667888999999888764 11111111111111110 0111110 11111100 000001111122333333 33
Q ss_pred CccHHHHHHHhhHH---hhhhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEec
Q 041225 441 GNSLVYILEKDLES---DLFDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGIC 514 (658)
Q Consensus 441 ~~~~~~~~~~~~~~---~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~ 514 (658)
.......+.+.+.. ....++.+.+..+++.+.+.+|+.+++.++++ +++++++||||.||++|++.||+||||
T Consensus 160 ~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam- 238 (279)
T 3mpo_A 160 YPQVIEQVKANMPQDFKDRFSVVQSAPYFIEVMNRRASKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVAM- 238 (279)
T ss_dssp CHHHHHHHHHHCCHHHHHHEEEECCSSSEEEEEESSCCHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECBC-
T ss_pred CHHHHHHHHHHHHHHhCCCEEEEEecCceEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCceeec-
Confidence 33333333333322 22456667788999999999999999999988 568899999999999999999999999
Q ss_pred Cccchhhhhhccccccccc
Q 041225 515 GQEGRQAVMASDFAMGQFR 533 (658)
Q Consensus 515 ~~~~~~~k~~AD~vl~~~~ 533 (658)
+|+.+.+|++||+|+.+.+
T Consensus 239 ~na~~~~k~~A~~v~~~~~ 257 (279)
T 3mpo_A 239 GNAIDEVKEAAQAVTLTNA 257 (279)
T ss_dssp ---CCHHHHHCSCBC----
T ss_pred cCCCHHHHHhcceeccCCC
Confidence 7777789999999987654
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.86 E-value=5.6e-22 Score=200.53 Aligned_cols=232 Identities=16% Similarity=0.150 Sum_probs=147.4
Q ss_pred HHHHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccC------------CCccE
Q 041225 297 RQTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLT------------PDMQQ 364 (658)
Q Consensus 297 ~~~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~------------~~~~~ 364 (658)
..+++++|+||||++. ...+++.+.++|++++++|++++++|||++..+..+.+.+|+.. .+++.
T Consensus 20 ~~kli~~DlDGTLl~~---~~~i~~~~~~al~~l~~~G~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~nGa~i~~~~~~~ 96 (285)
T 3pgv_A 20 MYQVVASDLDGTLLSP---DHFLTPYAKETLKLLTARGINFVFATGRHYIDVGQIRDNLGIRSYMITSNGARVHDSDGQQ 96 (285)
T ss_dssp -CCEEEEECCCCCSCT---TSCCCHHHHHHHHHHHTTTCEEEEECSSCGGGGHHHHHHHCSCCEEEEGGGTEEECTTSCE
T ss_pred cceEEEEeCcCCCCCC---CCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCCCccEEEcCCeEEECCCCCE
Confidence 3467899999999997 55899999999999999999999999999999999998888732 23455
Q ss_pred EEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccc-hhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCcc
Q 041225 365 IIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKR-SAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNS 443 (658)
Q Consensus 365 i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 443 (658)
+.....+.+.+.++++..................+... ..............+. ....... ......++.+.....+
T Consensus 97 l~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~i~ki~~~~~~~~ 174 (285)
T 3pgv_A 97 IFAHNLDRDIAADLFEIVRNDPKIVTNVYREDEWYMNRHRPEEMRFFKEAVFNYK-LYEPGEL-DPQGISKVFFTCEDHE 174 (285)
T ss_dssp EEECCCCHHHHHHHTTTTTTCTTCEEEEEETTEEEESSCC-----CTTSCCCCEE-ECCTTCS-CCSSEEEEEEECSCHH
T ss_pred EEecCCCHHHHHHHHHHHhhcCCeEEEEEcCCcEEEcCCCHHHHHHHHhcCCccE-EecHHHc-CCCCceEEEEeCCCHH
Confidence 56667788888888763322211111000000111111 0000000000000000 0000000 0111222222212323
Q ss_pred HHHHHHHhhHHhh---hhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCcc
Q 041225 444 LVYILEKDLESDL---FDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQE 517 (658)
Q Consensus 444 ~~~~~~~~~~~~~---~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~ 517 (658)
....+.+.+...+ ..+..+....+++.+.+.+|+.+++.++++ +.+++++|||+.||++|++.||+|||| +|+
T Consensus 175 ~~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~vAm-~Na 253 (285)
T 3pgv_A 175 HLLPLEQAMNARWGDRVNVSFSTLTCLEVMAGGVSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIM-ANA 253 (285)
T ss_dssp HHHHHHHHHHHHHGGGEEEEESSTTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTS
T ss_pred HHHHHHHHHHHHhcCCEEEEEeCCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCEEEc-cCC
Confidence 3333334343322 345567778899999999999999999987 568999999999999999999999999 788
Q ss_pred chhhhhhccc--ccccccc
Q 041225 518 GRQAVMASDF--AMGQFRF 534 (658)
Q Consensus 518 ~~~~k~~AD~--vl~~~~~ 534 (658)
.+.+|++||+ ++.+.+-
T Consensus 254 ~~~vk~~A~~~~v~~sn~e 272 (285)
T 3pgv_A 254 HQRLKDLHPELEVIGSNAD 272 (285)
T ss_dssp CHHHHHHCTTSEECCCGGG
T ss_pred CHHHHHhCCCCEecccCCc
Confidence 8889999995 5555443
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=99.84 E-value=8.7e-21 Score=188.87 Aligned_cols=228 Identities=17% Similarity=0.126 Sum_probs=147.4
Q ss_pred HHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc---CC-------CccEEEEc
Q 041225 299 TAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL---TP-------DMQQIIIN 368 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~---~~-------~~~~i~~~ 368 (658)
+++++|+||||++. +..+++.+.++|++++++|++++++|||++..+..+...+++. .. .++++...
T Consensus 4 kli~~DlDGTLl~~---~~~i~~~~~~al~~l~~~G~~~~~aTGR~~~~~~~~~~~l~~~~~i~~nGa~i~~~~~~i~~~ 80 (258)
T 2pq0_A 4 KIVFFDIDGTLLDE---QKQLPLSTIEAVRRLKQSGVYVAIATGRAPFMFEHVRKQLGIDSFVSFNGQYVVFEGNVLYKQ 80 (258)
T ss_dssp CEEEECTBTTTBCT---TSCCCHHHHHHHHHHHHTTCEEEEECSSCGGGSHHHHHHHTCCCEEEGGGTEEEETTEEEEEC
T ss_pred eEEEEeCCCCCcCC---CCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHhcCCCEEEECCCCEEEECCEEEEEe
Confidence 34679999999997 5579999999999999999999999999999998888887642 22 23444556
Q ss_pred CCCHHHHHHHHHHHHHhcCcccCccccccccccc-h-hHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHH
Q 041225 369 GNSEEECKDLLADAKARYGVKSSNRTKCNSKLKR-S-AEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVY 446 (658)
Q Consensus 369 g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 446 (658)
..+.+.++++++.+++. +...........+... . .............+..... .........++. +...+....
T Consensus 81 ~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~k~~-~~~~~~~~~ 156 (258)
T 2pq0_A 81 PLRREKVRALTEEAHKN-GHPLVFMDAEKMRASIGDHPHIHVSMASLKFAHPPVDP--LYYENKDIYQAL-LFCRAEEEE 156 (258)
T ss_dssp CCCHHHHHHHHHHHHHT-TCCEEEECSSCEEESSSSCHHHHHHHHHTTCCCCCBCT--TGGGGSCCCEEE-ECSCHHHHH
T ss_pred cCCHHHHHHHHHHHHhC-CCeEEEEeCCcEEEecCCcHHHHHHHHhhcCCcccccc--chhhccCceEEE-EECCHHHHH
Confidence 77899999999988764 1111111000101111 1 1111111111111111111 111112222322 222222222
Q ss_pred HHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhh
Q 041225 447 ILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVM 523 (658)
Q Consensus 447 ~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~ 523 (658)
.+.+.+. ...+..+.+..+++.+.+++|+.+++.++++ ++++++|||||.||++|++.||+|||| +|+.+.+|+
T Consensus 157 ~~~~~~~--~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~vam-~na~~~~k~ 233 (258)
T 2pq0_A 157 PYVRNYP--EFRFVRWHDVSTDVLPAGGSKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAM-GNAHEEVKR 233 (258)
T ss_dssp HHHHHCT--TEEEEEEETTEEEEEESSCCHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEEE-TTCCHHHHH
T ss_pred HHHHhCC--CeEEEEeCCceEEEEECCCChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEEe-CCCcHHHHH
Confidence 2221111 1233445667899999999999999999987 678999999999999999999999999 678888999
Q ss_pred hcccccccccchH
Q 041225 524 ASDFAMGQFRFLK 536 (658)
Q Consensus 524 ~AD~vl~~~~~l~ 536 (658)
.||+|+.+.+.-.
T Consensus 234 ~A~~v~~~~~~dG 246 (258)
T 2pq0_A 234 VADFVTKPVDKEG 246 (258)
T ss_dssp TCSEEECCGGGTH
T ss_pred hCCEEeCCCCcch
Confidence 9999987765443
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.84 E-value=6.3e-21 Score=193.41 Aligned_cols=231 Identities=16% Similarity=0.147 Sum_probs=151.3
Q ss_pred HHHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccC------------CCccEE
Q 041225 298 QTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLT------------PDMQQI 365 (658)
Q Consensus 298 ~~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~------------~~~~~i 365 (658)
.+++++|+||||++. +..+++.+.++|++++++|++++++|||++..+..+...+|+.. ..++.+
T Consensus 6 ~kli~fDlDGTLl~~---~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~ 82 (290)
T 3dnp_A 6 KQLLALNIDGALLRS---NGKIHQATKDAIEYVKKKGIYVTLVTNRHFRSAQKIAKSLKLDAKLITHSGAYIAEKIDAPF 82 (290)
T ss_dssp CCEEEECCCCCCSCT---TSCCCHHHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHTTCCSCEEEGGGTEEESSTTSCS
T ss_pred ceEEEEcCCCCCCCC---CCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCeEEEcCCeEEEcCCCCEE
Confidence 356789999999998 55899999999999999999999999999999999999888641 234445
Q ss_pred EEcCCCHHHHHHHHHHHHHhcCcccCccccccccccchh-H--HHHHHhhcC-CCC-CCCCCCCchhh-----hhccCcE
Q 041225 366 IINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSA-E--IEYLAISND-AKF-SDVPQGHDVKE-----VAAIASL 435 (658)
Q Consensus 366 ~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~-~~~-~~~~~~~~~~~-----~~~~~~~ 435 (658)
.....+.+.+.++++.+++. +...........+..... . ......... ... ..........+ .....++
T Consensus 83 ~~~~l~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki 161 (290)
T 3dnp_A 83 FEKRISDDHTFNIVQVLESY-QCNIRLLHEKYSIGNKKKVNSNLLGKALIHPSDPIFYPVQFVESLSDLLMDEPVSAPVI 161 (290)
T ss_dssp EECCCCHHHHHHHHHHHHTS-SCEEEEECSSCEEECCCCCCCHHHHHSCCCCCBTTTBCEEECSCHHHHHHHSCCCCSEE
T ss_pred EecCCCHHHHHHHHHHHHHc-CceEEEEECCcEEeeccccchhhhhhhhccccccccccccccCCHHHHHhcCCCCceEE
Confidence 55667888999999888764 111111110000110000 0 000000000 000 00000000111 1123344
Q ss_pred EEEEeCccHHHHHHHhhHH--hhhhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhccee
Q 041225 436 ALIIDGNSLVYILEKDLES--DLFDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVG 510 (658)
Q Consensus 436 ~l~~~~~~~~~~~~~~~~~--~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vg 510 (658)
++....+....+.+.+.. ....+..+.+..+++.+.+.+|+.+++.++++ +++++++||||.||++|++.||+|
T Consensus 162 -~~~~~~~~~~~~~~~l~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~ 240 (290)
T 3dnp_A 162 -EVYTEHDIQHDITETITKAFPAVDVIRVNDEKLNIVPKGVSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLG 240 (290)
T ss_dssp -EEECCGGGHHHHHHHHHHHCTTEEEEEEETTEEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEE
T ss_pred -EEeCCHHHHHHHHHHHHhhCCcEEEEEeCCCeEEEEECCCCHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCE
Confidence 334444333333333221 22345566778899999999999999999988 668899999999999999999999
Q ss_pred EEecCccchhhhhhcccccccccc
Q 041225 511 VGICGQEGRQAVMASDFAMGQFRF 534 (658)
Q Consensus 511 Iam~~~~~~~~k~~AD~vl~~~~~ 534 (658)
||| +|+.+.+|+.||+|+.+.+-
T Consensus 241 vam-~na~~~~k~~Ad~v~~s~~e 263 (290)
T 3dnp_A 241 VAM-GNAVPEIKRKADWVTRSNDE 263 (290)
T ss_dssp EEC-TTSCHHHHHHSSEECCCTTT
T ss_pred EEe-cCCcHHHHHhcCEECCCCCc
Confidence 999 77778899999999877654
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.84 E-value=3.1e-21 Score=196.91 Aligned_cols=232 Identities=14% Similarity=0.116 Sum_probs=152.9
Q ss_pred HHHHhhhccceeeeccccccccCCC-hHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc-----------CCCccEE
Q 041225 298 QTAALIECDLTLLGATGIEDKLQDG-VPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL-----------TPDMQQI 365 (658)
Q Consensus 298 ~~~~~~d~DgTllg~~~~~d~l~~~-~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~-----------~~~~~~i 365 (658)
.+++++|+||||++. +..+.+. +.++|++++++|+.++++|||++..+..+...+++. ...++.+
T Consensus 37 iKli~fDlDGTLld~---~~~i~~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~i 113 (304)
T 3l7y_A 37 VKVIATDMDGTFLNS---KGSYDHNRFQRILKQLQERDIRFVVASSNPYRQLREHFPDCHEQLTFVGENGANIISKNQSL 113 (304)
T ss_dssp CSEEEECCCCCCSCT---TSCCCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHTTCTTTGGGSEEEEGGGTEEEETTEEE
T ss_pred eEEEEEeCCCCCCCC---CCccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhCCCCcEEeCCCcEEEECCEEE
Confidence 356889999999997 5578888 899999999999999999999999988876665541 1234455
Q ss_pred EEcCCCHHHHHHHHHHHHHhc-CcccCccccccccccch--hHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCc
Q 041225 366 IINGNSEEECKDLLADAKARY-GVKSSNRTKCNSKLKRS--AEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGN 442 (658)
Q Consensus 366 ~~~g~~~~~~~~ii~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 442 (658)
.....+.+.+.++++.+.+.+ +...........+.... ....................... ......++.+.. ..
T Consensus 114 ~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~ki~~~~-~~ 191 (304)
T 3l7y_A 114 IEVFQQREDIASIIYFIEEKYPQAVIALSGEKKGYLKKGVSENIVKMLSPFFPVLELVNSFSPL-PDERFFKLTLQV-KE 191 (304)
T ss_dssp EECCCCHHHHHHHHHHHHHHCTTSEEEEEESSCEEEETTSCHHHHHHHTTSCSSEEEESCCSSC-C-CCEEEEEEEC-CG
T ss_pred EEecCCHHHHHHHHHHHHHhcCCeEEEEEcCCCEeeeCCCCHHHHHHHHHHhccceecCCHHHc-CcCCeEEEEEEc-CH
Confidence 556678899999999887742 22222111111111111 11111111111111000011100 011223333333 33
Q ss_pred cHHHHHHHhhHHh----hhhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecC
Q 041225 443 SLVYILEKDLESD----LFDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICG 515 (658)
Q Consensus 443 ~~~~~~~~~~~~~----~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~ 515 (658)
.....+.+.+... ...++.+....+++.+.+.+|+.+++.++++ +++++++|||+.||++|++.||+|||| +
T Consensus 192 ~~~~~~~~~l~~~~~~~~~~~~~s~~~~~ei~~~~~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~vam-~ 270 (304)
T 3l7y_A 192 EESAQIMKAIADYKTSQRLVGTASGFGYIDIITKGLHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAM-A 270 (304)
T ss_dssp GGHHHHHHHHHTSTTTTTEEEEECSTTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEEEEC-T
T ss_pred HHHHHHHHHHHHhcCCCeEEEEEcCCceEEEEcCCCCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCeEEc-C
Confidence 3333333333322 2445667778899999999999999999987 568899999999999999999999999 7
Q ss_pred ccchhhhhhcccccccccch
Q 041225 516 QEGRQAVMASDFAMGQFRFL 535 (658)
Q Consensus 516 ~~~~~~k~~AD~vl~~~~~l 535 (658)
|+.+.+|++||+|+.+.+--
T Consensus 271 na~~~~k~~Ad~v~~~~~ed 290 (304)
T 3l7y_A 271 NAPKNVKAAANYQAKSNDES 290 (304)
T ss_dssp TSCHHHHHHCSEECCCGGGT
T ss_pred CcCHHHHHhccEEcCCCCcc
Confidence 78888999999998876553
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.83 E-value=3e-20 Score=187.39 Aligned_cols=229 Identities=16% Similarity=0.142 Sum_probs=147.4
Q ss_pred HHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccC-------C---------Cc
Q 041225 299 TAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLT-------P---------DM 362 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~-------~---------~~ 362 (658)
+++++|+||||++. +..+++++.++|++++++|++++++|||++..+..+.+.+++.. . ++
T Consensus 6 kli~~DlDGTLl~~---~~~i~~~~~~aL~~l~~~Gi~vviaTGR~~~~~~~~~~~l~l~~~~~~~I~~NGa~i~~~~~~ 82 (282)
T 1rkq_A 6 KLIAIDMDGTLLLP---DHTISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCITYNGALVQKAADG 82 (282)
T ss_dssp CEEEECCCCCCSCT---TSCCCHHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCCSTTCEEEEGGGTEEEETTTC
T ss_pred eEEEEeCCCCCCCC---CCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCCCCCeEEEeCCeEEEECCCC
Confidence 35689999999997 56899999999999999999999999999999999999887632 1 23
Q ss_pred cEEEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccc--hhHHHHHH-hhcCCCCCCCCCCCchhhhhccCcEEEEE
Q 041225 363 QQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKR--SAEIEYLA-ISNDAKFSDVPQGHDVKEVAAIASLALII 439 (658)
Q Consensus 363 ~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 439 (658)
+++.....+.+.++++++.+++. +...........+... ........ ........ ..............++.+.
T Consensus 83 ~~i~~~~l~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ki~~~- 159 (282)
T 1rkq_A 83 STVAQTALSYDDYRFLEKLSREV-GSHFHALDRTTLYTANRDISYYTVHESFVATIPLV-FCEAEKMDPNTQFLKVMMI- 159 (282)
T ss_dssp CEEEECCBCHHHHHHHHHHHHHH-TCEEEEECSSCEEECCSSCCHHHHHHHHHTTCCEE-ECCGGGSCTTCCBCEEEEE-
T ss_pred eEEEEecCCHHHHHHHHHHHHHc-CCEEEEEECCEEEEcCCchhHHHHHHhhhccCCcc-ccchhHhcccCCceEEEEE-
Confidence 34444556888899999888764 2211111111111111 00111110 01111100 0000000001123344333
Q ss_pred eCccHHHHHHHhhHHh---hhhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEe
Q 041225 440 DGNSLVYILEKDLESD---LFDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGI 513 (658)
Q Consensus 440 ~~~~~~~~~~~~~~~~---~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam 513 (658)
...+....+.+.+... ...+..+.+.++++.+.+++|+.+++.++++ +++++++|||+.||++|++.||+||||
T Consensus 160 ~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~lei~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~ 239 (282)
T 1rkq_A 160 DEPAILDQAIARIPQEVKEKYTVLKSAPYFLEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAV 239 (282)
T ss_dssp CCHHHHHHHHHHSCHHHHHHEEEEEEETTEEEEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC
T ss_pred CCHHHHHHHHHHHHHHhcCCEEEEEeCCceEEecCCCCCCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCcEEEe
Confidence 3333222233333222 2344556677899999999999999999987 567899999999999999999999999
Q ss_pred cCccchhhhhhcccccccccc
Q 041225 514 CGQEGRQAVMASDFAMGQFRF 534 (658)
Q Consensus 514 ~~~~~~~~k~~AD~vl~~~~~ 534 (658)
+++.+.+++.||+++.+.+.
T Consensus 240 -~n~~~~~~~~a~~v~~~~~~ 259 (282)
T 1rkq_A 240 -DNAIPSVKEVANFVTKSNLE 259 (282)
T ss_dssp -TTSCHHHHHHCSEECCCTTT
T ss_pred -cCCcHHHHhhCCEEecCCCc
Confidence 56666788999999876543
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.83 E-value=5e-20 Score=185.04 Aligned_cols=230 Identities=16% Similarity=0.124 Sum_probs=151.2
Q ss_pred HHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc---CC-------CccEEEEc
Q 041225 299 TAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL---TP-------DMQQIIIN 368 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~---~~-------~~~~i~~~ 368 (658)
+++++|+||||++. +..+++.+.++|++++++|++++++|||++..+..+...+++. .. .++.+...
T Consensus 6 kli~fDlDGTLl~~---~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~ 82 (274)
T 3fzq_A 6 KLLILDIDGTLRDE---VYGIPESAKHAIRLCQKNHCSVVICTGRSMGTIQDDVLSLGVDGYIAGGGNYIQYHGELLYNQ 82 (274)
T ss_dssp CEEEECSBTTTBBT---TTBCCHHHHHHHHHHHHTTCEEEEECSSCTTTSCHHHHTTCCSEEEETTTTEEEETTEEEEEC
T ss_pred eEEEEECCCCCCCC---CCcCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCEEEecCccEEEECCEEEEEc
Confidence 35689999999998 5589999999999999999999999999999998888777652 11 33445566
Q ss_pred CCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHh--------------hcCCCCCCCCCCCchhhhhccCc
Q 041225 369 GNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAI--------------SNDAKFSDVPQGHDVKEVAAIAS 434 (658)
Q Consensus 369 g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~ 434 (658)
..+.+.+.++++.+++. +...........+.. ......+.. ............... ......+
T Consensus 83 ~l~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~k 159 (274)
T 3fzq_A 83 SFNQRLIKEVVCLLKKR-EVAFSIESQEKVFMN-QKAKEIFETMNQLKGTNSCINKQHIQEKITYENNIEEY-KSQDIHK 159 (274)
T ss_dssp CCCHHHHHHHHHHHHHH-TCEEEEECSSCEEEC-HHHHHHHHHHHHTTTSCCTTHHHHCCSSSCCCCCGGGC-SSCCCCE
T ss_pred CCCHHHHHHHHHHHHHC-CceEEEEeCCceEeC-CchHHHHHHHHhhhccchhhhhhhhhhhcccccchhhh-cccCeEE
Confidence 67889999999888774 111111111111111 111111100 000000000100000 0122334
Q ss_pred EEEEEeCccHHHHHHHhhHHhhhhhhccCC--eeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcce
Q 041225 435 LALIIDGNSLVYILEKDLESDLFDLATSCR--VVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADV 509 (658)
Q Consensus 435 ~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~--~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~v 509 (658)
+.+. ........+.+.+... ..+..+.+ .++++.+.+.+|+.+++.++++ +++++++|||+.||++|++.||+
T Consensus 160 i~~~-~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~ 237 (274)
T 3fzq_A 160 ICLW-SNEKVFDEVKDILQDK-MELAQRDISSQYYEIIQKDFHKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQASDV 237 (274)
T ss_dssp EEEE-CCHHHHHHHHHHHGGG-EEEEEEEGGGTEEEEEETTCSHHHHHHHHHHHHTCCSTTEEEECCSGGGHHHHHTCSE
T ss_pred EEEE-cCHHHHHHHHHHhhcc-eEEEeccCCCceEEEeeCCCCHHHHHHHHHHHcCCCHHHEEEECCChhHHHHHHhcCc
Confidence 4444 3333333333333332 24444555 7899999999999999999987 67899999999999999999999
Q ss_pred eEEecCccchhhhhhcccccccccchHH
Q 041225 510 GVGICGQEGRQAVMASDFAMGQFRFLKR 537 (658)
Q Consensus 510 gIam~~~~~~~~k~~AD~vl~~~~~l~~ 537 (658)
|||| +|+.+++|+.||+|+.+.+--..
T Consensus 238 ~vam-~na~~~~k~~A~~v~~~~~edGv 264 (274)
T 3fzq_A 238 TIAM-KNSHQQLKDIATSICEDIFDNGI 264 (274)
T ss_dssp EEEE-TTSCHHHHHHCSEEECCGGGTHH
T ss_pred eEEe-cCccHHHHHhhhheeCCCchhHH
Confidence 9999 77778899999999987665433
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.83 E-value=1.2e-20 Score=188.91 Aligned_cols=231 Identities=18% Similarity=0.172 Sum_probs=145.8
Q ss_pred HHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCc----------c-CCCccEEEE
Q 041225 299 TAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKL----------L-TPDMQQIII 367 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl----------~-~~~~~~i~~ 367 (658)
+++++|+||||++.. ...+++.+.++|++++++|++++++|||+...+. ....+++ + ...++.+..
T Consensus 13 Kli~~DlDGTLl~~~--~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~-~~~~l~~~~~i~~nGa~i~~~~~~~~~~ 89 (268)
T 3r4c_A 13 KVLLLDVDGTLLSFE--THKVSQSSIDALKKVHDSGIKIVIATGRAASDLH-EIDAVPYDGVIALNGAECVLRDGSVIRK 89 (268)
T ss_dssp CEEEECSBTTTBCTT--TCSCCHHHHHHHHHHHHTTCEEEEECSSCTTCCG-GGTTSCCCEEEEGGGTEEEETTSCEEEE
T ss_pred EEEEEeCCCCCcCCC--CCcCCHHHHHHHHHHHHCCCEEEEEcCCChHHhH-HHHhcCCCcEEEeCCcEEEEcCCeEEEE
Confidence 457899999999831 3479999999999999999999999999987653 3334432 1 223345667
Q ss_pred cCCCHHHHHHHHHHHHHhcCcccCccccccccccc-hhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHH
Q 041225 368 NGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKR-SAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVY 446 (658)
Q Consensus 368 ~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 446 (658)
...+.+.+.++++.+++. ............+... ...............................++.+....... .
T Consensus 90 ~~l~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 167 (268)
T 3r4c_A 90 VAIPAQDFRKSMELAREF-DFAVALELNEGVFVNRLTPTVEQIAGIVEHPVPPVVDIEEMFERKECCQLCFYFDEEAE-Q 167 (268)
T ss_dssp CCCCHHHHHHHHHHHHHT-TCEEEEEETTEEEESCCCHHHHHHHHHHTCCCCCBCCHHHHHHHSCCCCEEEECCHHHH-H
T ss_pred ecCCHHHHHHHHHHHHHc-CcEEEEEECCEEEEeCCcHHHHHHHHHcCCCCCcccchHHHhccCceEEEEEecChHHH-H
Confidence 778899999999888663 1111111111111111 111111111111111111111001111233344333322222 1
Q ss_pred HHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhh
Q 041225 447 ILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVM 523 (658)
Q Consensus 447 ~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~ 523 (658)
.+.+.+ .......+.+..+++.+.+.+|+.+++.++++ +++++++||||.||++|++.||+|||| +|+.+.+|+
T Consensus 168 ~~~~~~--~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam-~na~~~~k~ 244 (268)
T 3r4c_A 168 KVMPLL--SGLSATRWHPLFADVNVAGTSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAM-GNASEKVQS 244 (268)
T ss_dssp HHGGGC--TTEEEEEEETTEEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTSCHHHHH
T ss_pred HHHHhC--CCcEEEEecCCeEEEeeCCCCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEe-CCCcHHHHH
Confidence 111111 11234455667899999999999999999988 667899999999999999999999999 778888999
Q ss_pred hcccccccccchHH
Q 041225 524 ASDFAMGQFRFLKR 537 (658)
Q Consensus 524 ~AD~vl~~~~~l~~ 537 (658)
+||+|+.+.+--..
T Consensus 245 ~Ad~v~~~~~edGv 258 (268)
T 3r4c_A 245 VADFVTDTVDNSGL 258 (268)
T ss_dssp TCSEECCCTTTTHH
T ss_pred hcCEeeCCCCcCHH
Confidence 99999987655433
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=99.81 E-value=2.4e-20 Score=187.04 Aligned_cols=228 Identities=16% Similarity=0.195 Sum_probs=146.2
Q ss_pred HHHhhhccceeeeccccccccCCCh-HHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCc----cCC-------CccEEE
Q 041225 299 TAALIECDLTLLGATGIEDKLQDGV-PEAIEALRQAGIKVWVLTGDKQDTAISIALSCKL----LTP-------DMQQII 366 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~d~l~~~~-~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl----~~~-------~~~~i~ 366 (658)
+++++|+||||++. +..+++.+ .++|++|+++|++++++|||++..+..+...+++ +.. +++++.
T Consensus 4 kli~~DlDGTLl~~---~~~i~~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~ 80 (271)
T 1rlm_A 4 KVIVTDMDGTFLND---AKTYNQPRFMAQYQELKKRGIKFVVASGNQYYQLISFFPELKDEISFVAENGALVYEHGKQLF 80 (271)
T ss_dssp CEEEECCCCCCSCT---TSCCCHHHHHHHHHHHHHHTCEEEEECSSCHHHHGGGCTTTTTTSEEEEGGGTEEEETTEEEE
T ss_pred cEEEEeCCCCCCCC---CCcCCHHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHhcCCCCEEEECCccEEEECCeEEE
Confidence 34679999999997 45788885 9999999999999999999999988777665542 222 233455
Q ss_pred EcCCCHHHHHHHHHHHHHhcCcccCccccccccccc--hhHHHHHHhhcCCCCCCCCCCCchhhh-hccCcEEEEEeCcc
Q 041225 367 INGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKR--SAEIEYLAISNDAKFSDVPQGHDVKEV-AAIASLALIIDGNS 443 (658)
Q Consensus 367 ~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~ 443 (658)
....+.+.++++++.+++..............+... ........... +............ ....++.+..+...
T Consensus 81 ~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ki~i~~~~~~ 157 (271)
T 1rlm_A 81 HGELTRHESRIVIGELLKDKQLNFVACGLQSAYVSENAPEAFVALMAKH---YHRLKPVKDYQEIDDVLFKFSLNLPDEQ 157 (271)
T ss_dssp ECCCCHHHHHHHHHHHHTCTTCEEEEEESSCEEEETTSCHHHHHHHHTT---CSSEEEESCGGGCCSCEEEEEEECCGGG
T ss_pred EecCCHHHHHHHHHHHHhCCCccEEEEeCCCEEeeCCCCHHHHHHHHHh---CCCCEEeCchhhCCCceEEEEEEcCHHH
Confidence 667789999999998876432211111111111111 11111111110 1110000011111 12233333333333
Q ss_pred HHHHHHHhhHHh---hhhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCcc
Q 041225 444 LVYILEKDLESD---LFDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQE 517 (658)
Q Consensus 444 ~~~~~~~~~~~~---~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~ 517 (658)
...+.+.+... ...+..+++.++++.+.+.+|+.+++.++++ +++++++|||+.||++|++.||+||+| +++
T Consensus 158 -~~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~~m~~~ag~~va~-~na 235 (271)
T 1rlm_A 158 -IPLVIDKLHVALDGIMKPVTSGFGFIDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAM-GNA 235 (271)
T ss_dssp -HHHHHHHHHHHTTTSSEEEECSTTEEEEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEEC-TTC
T ss_pred -HHHHHHHHHHHcCCcEEEEeccCCeEEEEcCCCChHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHcCCeEEe-CCc
Confidence 22222333321 2344556677899999999999999999987 567899999999999999999999999 667
Q ss_pred chhhhhhcccccccccc
Q 041225 518 GRQAVMASDFAMGQFRF 534 (658)
Q Consensus 518 ~~~~k~~AD~vl~~~~~ 534 (658)
.+.++..||+++.+.+.
T Consensus 236 ~~~~k~~a~~v~~~~~~ 252 (271)
T 1rlm_A 236 AENIKQIARYATDDNNH 252 (271)
T ss_dssp CHHHHHHCSEECCCGGG
T ss_pred cHHHHHhCCeeCcCCCC
Confidence 67789999999877654
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.81 E-value=1.4e-19 Score=180.97 Aligned_cols=228 Identities=17% Similarity=0.119 Sum_probs=147.9
Q ss_pred HHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccC------------C-CccEEE
Q 041225 300 AALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLT------------P-DMQQII 366 (658)
Q Consensus 300 ~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~------------~-~~~~i~ 366 (658)
++++|+||||++. +..+++++.++|++ +++|++++++|||++..+..+...+|+.. . +++++.
T Consensus 4 li~~DlDGTLl~~---~~~i~~~~~~al~~-~~~Gi~v~iaTGR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~~~~~i~ 79 (268)
T 1nf2_A 4 VFVFDLDGTLLND---NLEISEKDRRNIEK-LSRKCYVVFASGRMLVSTLNVEKKYFKRTFPTIAYNGAIVYLPEEGVIL 79 (268)
T ss_dssp EEEEECCCCCSCT---TSCCCHHHHHHHHH-HTTTSEEEEECSSCHHHHHHHHHHHSSSCCCEEEGGGTEEEETTTEEEE
T ss_pred EEEEeCCCcCCCC---CCccCHHHHHHHHH-HhCCCEEEEECCCChHHHHHHHHHhCCCCCeEEEeCCeEEECCCCCEEE
Confidence 4678999999997 55899999999999 99999999999999999999998887632 1 345555
Q ss_pred EcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHH-HHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHH
Q 041225 367 INGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEY-LAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLV 445 (658)
Q Consensus 367 ~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 445 (658)
....+.+.++++++.+++. +...........+......... .........................++.+. ...+..
T Consensus 80 ~~~l~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~-~~~~~~ 157 (268)
T 1nf2_A 80 NEKIPPEVAKDIIEYIKPL-NVHWQAYIDDVLYSEKDNEEIKSYARHSNVDYRVEPNLSELVSKMGTTKLLLI-DTPERL 157 (268)
T ss_dssp ECCBCHHHHHHHHHHHGGG-CCCEEEECSSCEEESSCCHHHHHHHHHTTCCEEECTTHHHHHHHHCBSEEEEE-CCHHHH
T ss_pred ecCCCHHHHHHHHHHHHhC-CCEEEEEECCEEEECCChHHHHHHHhhcCCceEecCCHHHhcccCCceEEEEE-CCHHHH
Confidence 6677889999999888763 2111111111111111111111 111111100000000011111233444433 333333
Q ss_pred HHHHHhhHHhh---hhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccch
Q 041225 446 YILEKDLESDL---FDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGR 519 (658)
Q Consensus 446 ~~~~~~~~~~~---~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~ 519 (658)
..+.+.+...+ ..+..+.+.++++.+.+.+|+.+++.++++ +++++++|||+.||++|++.||+||+| +++.+
T Consensus 158 ~~~~~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v~~-~n~~~ 236 (268)
T 1nf2_A 158 DELKEILSERFKDVVKVFKSFPTYLEIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAM-ENAIE 236 (268)
T ss_dssp HHHHHHHHHHHTTTSEEEEEETTEEEEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEEC-TTSCH
T ss_pred HHHHHHHHHHhcCCEEEEEecCceEEEeCCCCChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEEEe-cCCCH
Confidence 33333333222 334456667899999999999999999987 567899999999999999999999999 56677
Q ss_pred hhhhhcccccccccc
Q 041225 520 QAVMASDFAMGQFRF 534 (658)
Q Consensus 520 ~~k~~AD~vl~~~~~ 534 (658)
.++..||+++.+.+.
T Consensus 237 ~~~~~a~~v~~~~~~ 251 (268)
T 1nf2_A 237 KVKEASDIVTLTNND 251 (268)
T ss_dssp HHHHHCSEECCCTTT
T ss_pred HHHhhCCEEEccCCc
Confidence 788999999876554
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.79 E-value=1.7e-19 Score=183.37 Aligned_cols=229 Identities=14% Similarity=0.116 Sum_probs=146.2
Q ss_pred HHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHH--HHcC-cc-------CC--------
Q 041225 299 TAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIA--LSCK-LL-------TP-------- 360 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia--~~~g-l~-------~~-------- 360 (658)
.++++|+||||++.. +..+++++.++|++|+++|++|+++|||++..+..+. ..++ +. ..
T Consensus 28 kli~~DlDGTLl~~~--~~~is~~~~~al~~l~~~Gi~v~iaTGR~~~~~~~~~~~~~l~~~~~~~~~~I~~NGa~i~~~ 105 (301)
T 2b30_A 28 KLLLIDFDGTLFVDK--DIKVPSENIDAIKEAIEKGYMVSICTGRSKVGILSAFGEENLKKMNFYGMPGVYINGTIVYDQ 105 (301)
T ss_dssp CEEEEETBTTTBCCT--TTCSCHHHHHHHHHHHHHTCEEEEECSSCHHHHHHHHCHHHHHHHTCCSCSEEEGGGTEEECT
T ss_pred cEEEEECCCCCcCCC--CCccCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHhhHHhhcccccCCCeEEEcCCeEEEeC
Confidence 467899999999851 2379999999999999999999999999999998888 7665 42 22
Q ss_pred CccEEEEcCCCHHHHHHHHHHHHHhcCc-ccCcc-ccccccccch---hHHHHHHhhcCCCCCCCCCCCchhhhhccCcE
Q 041225 361 DMQQIIINGNSEEECKDLLADAKARYGV-KSSNR-TKCNSKLKRS---AEIEYLAISNDAKFSDVPQGHDVKEVAAIASL 435 (658)
Q Consensus 361 ~~~~i~~~g~~~~~~~~ii~~~~~~~~~-~~~~~-~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (658)
+++++.....+.+.++++++.+++. +. ..... .....+.... .................. .......+..++
T Consensus 106 ~~~~i~~~~l~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~ki 182 (301)
T 2b30_A 106 IGYTLLDETIETDVYAELISYLVEK-NLVNQTIFHRGESNYVTEDNKYADFLQKMYSENRSIIIRH--NEMLKYRTMNKL 182 (301)
T ss_dssp TCCEEEECCCCHHHHHHHHHHHHHT-TCGGGEEEEETTEEEEETTCTTTTHHHHHHSCCCCEEECH--HHHTTCCCCSEE
T ss_pred CCCEEEEccCCHHHHHHHHHHHHHc-CCceEEEEEeCCEEEEcCchHHHHHHHHhhccCCceeecc--hhhhccCCceEE
Confidence 2344455566889999999888763 22 11111 0011111100 000100000000000000 000000123344
Q ss_pred EEEEeCccHHHHHHHhhHHh---hhhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcce
Q 041225 436 ALIIDGNSLVYILEKDLESD---LFDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADV 509 (658)
Q Consensus 436 ~l~~~~~~~~~~~~~~~~~~---~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~v 509 (658)
.+..+...... +.+.+... ...+..+++.++++.+.+++|+.+++.++++ +++++++|||+.||++|++.||+
T Consensus 183 ~~~~~~~~~~~-~~~~l~~~~~~~~~~~~s~~~~lei~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~ 261 (301)
T 2b30_A 183 MIVLDPSESKT-VIGNLKQKFKNKLTIFTTYNGHAEVTKLGHDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKY 261 (301)
T ss_dssp EECCCTTTHHH-HHHHHHHHSTTTEEEEECTTSCEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSE
T ss_pred EEECCHHHHHH-HHHHHHHHhcCCEEEEEeCCcceEecCCCCCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCC
Confidence 33333333333 33333322 2345556778899999999999999999987 56789999999999999999999
Q ss_pred eEEecCccchhhhhhcccccc-cccc
Q 041225 510 GVGICGQEGRQAVMASDFAMG-QFRF 534 (658)
Q Consensus 510 gIam~~~~~~~~k~~AD~vl~-~~~~ 534 (658)
|||| +++.+.++..||+++. +...
T Consensus 262 ~va~-~na~~~~k~~a~~v~~~~~~~ 286 (301)
T 2b30_A 262 SFAV-ANATDSAKSHAKCVLPVSHRE 286 (301)
T ss_dssp EEEC-TTCCHHHHHHSSEECSSCTTT
T ss_pred eEEE-cCCcHHHHhhCCEEEccCCCC
Confidence 9999 5666678999999987 6544
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.79 E-value=7e-19 Score=177.99 Aligned_cols=233 Identities=16% Similarity=0.077 Sum_probs=149.7
Q ss_pred HHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCC------------CccEEE
Q 041225 299 TAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTP------------DMQQII 366 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~------------~~~~i~ 366 (658)
+++++|+||||++. +..+++.+.++|++++++|++++++|||++..+..+...+++..+ .++.+.
T Consensus 5 kli~~DlDGTLl~~---~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~~~ 81 (288)
T 1nrw_A 5 KLIAIDLDGTLLNS---KHQVSLENENALRQAQRDGIEVVVSTGRAHFDVMSIFEPLGIKTWVISANGAVIHDPEGRLYH 81 (288)
T ss_dssp CEEEEECCCCCSCT---TSCCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHGGGTCCCEEEEGGGTEEECTTCCEEE
T ss_pred EEEEEeCCCCCCCC---CCccCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCcEEEcCCeEEEcCCCcEEE
Confidence 45789999999997 558999999999999999999999999999999998887765321 344555
Q ss_pred EcCCCHHHHHHHHHHHHHhcCcccCccccccccccchh--HHHHH-Hhh--------------------cCCCCCCCCCC
Q 041225 367 INGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSA--EIEYL-AIS--------------------NDAKFSDVPQG 423 (658)
Q Consensus 367 ~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~--------------------~~~~~~~~~~~ 423 (658)
....+.+.++++++.+++. +...........+..... ..... ... ....+......
T Consensus 82 ~~~~~~~~~~~i~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (288)
T 1nrw_A 82 HETIDKKRAYDILSWLESE-NYYYEVFTGSAIYTPQNGRELLDVELDRFRSANPEADLSVLKQAAEVQYSQSGFAYINSF 160 (288)
T ss_dssp ECCCCHHHHHHHHHHHHHT-TCEEEEEESSCEEECCCHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHTCCEEECSCG
T ss_pred EeeCCHHHHHHHHHHHHHC-CcEEEEEeCCEEEEcCchHHHHHHHHHHHhhcccccchHHHHhhhhhhhhcCCceEcCCH
Confidence 6667889999999988764 211111111111111100 00000 000 00001111111
Q ss_pred Cchh---hhhccCcEEEEEeCccHHHHHHHhhHH-hhhhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcC
Q 041225 424 HDVK---EVAAIASLALIIDGNSLVYILEKDLES-DLFDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGD 496 (658)
Q Consensus 424 ~~~~---~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGD 496 (658)
.... ......++.+.....+....+.+.+.. ....+..+++.++++.+.+++|+.+++.++++ +++++++|||
T Consensus 161 ~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~~l~~~~~~~~~~s~~~~lei~~~~~~K~~~~~~~~~~~~~~~~~~~~~GD 240 (288)
T 1nrw_A 161 QELFEADEPIDFYNILGFSFFKEKLEAGWKRYEHAEDLTLVSSAEHNFELSSRKASKGQALKRLAKQLNIPLEETAAVGD 240 (288)
T ss_dssp GGGTSSSSCCCEEEEEEECSCHHHHHHHHHHHTTCTTEEEECSSTTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEES
T ss_pred HHhhccccCCCceEEEEEcCCHHHHHHHHHHHhhCCCEEEEeeCCCcEEEecCCCChHHHHHHHHHHhCCCHHHEEEEcC
Confidence 1100 001222333332232333333333322 12345567778899999999999999999987 5678999999
Q ss_pred CcCChhhhhhcceeEEecCccchhhhhhcccccccccchH
Q 041225 497 GANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLK 536 (658)
Q Consensus 497 g~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~ 536 (658)
+.||++|++.||+||+| +++.+.++..||+++.+.+.-.
T Consensus 241 ~~nD~~m~~~ag~~va~-~~~~~~~~~~a~~v~~~~~~dG 279 (288)
T 1nrw_A 241 SLNDKSMLEAAGKGVAM-GNAREDIKSIADAVTLTNDEHG 279 (288)
T ss_dssp SGGGHHHHHHSSEEEEC-TTCCHHHHHHCSEECCCGGGTH
T ss_pred CHHHHHHHHHcCcEEEE-cCCCHHHHhhCceeecCCCcCh
Confidence 99999999999999999 6666778999999987765433
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=99.76 E-value=9.7e-19 Score=174.30 Aligned_cols=226 Identities=19% Similarity=0.208 Sum_probs=142.4
Q ss_pred HHhhhccceeeeccccccc-cCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcC----c---cCCC-------ccE
Q 041225 300 AALIECDLTLLGATGIEDK-LQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCK----L---LTPD-------MQQ 364 (658)
Q Consensus 300 ~~~~d~DgTllg~~~~~d~-l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~g----l---~~~~-------~~~ 364 (658)
++++|+||||++. +.. +++.++++|++++++|++++++|||+ ..+..+...++ + +..+ ++.
T Consensus 4 li~~DlDGTLl~~---~~~~i~~~~~~al~~l~~~G~~~~iaTGR~-~~~~~~~~~l~~~~~~~~~i~~nGa~i~~~~~~ 79 (261)
T 2rbk_A 4 ALFFDIDGTLVSF---ETHRIPSSTIEALEAAHAKGLKIFIATGRP-KAIINNLSELQDRNLIDGYITMNGAYCFVGEEV 79 (261)
T ss_dssp EEEECSBTTTBCT---TTSSCCHHHHHHHHHHHHTTCEEEEECSSC-GGGCCSCHHHHHTTCCCEEEEGGGTEEEETTEE
T ss_pred EEEEeCCCCCcCC---CCCcCCHHHHHHHHHHHHCCCEEEEECCCh-HHHHHHHHHhCcccccCeEEEeCCEEEEECCEE
Confidence 4678999999997 456 89999999999999999999999999 87766655554 2 2222 344
Q ss_pred EEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCC-CCCCCCCchhhhhccCcEEEEEeCcc
Q 041225 365 IIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKF-SDVPQGHDVKEVAAIASLALIIDGNS 443 (658)
Q Consensus 365 i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~ 443 (658)
+.....+.+.++++++.+++. +...........+.................. ................++.+ ...+.
T Consensus 80 i~~~~l~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-~~~~~ 157 (261)
T 2rbk_A 80 IYKSAIPQEEVKAMAAFCEKK-GVPCIFVEEHNISVCQPNEMVKKIFYDFLHVNVIPTVSFEEASNKEVIQMTP-FITEE 157 (261)
T ss_dssp EEECCCCHHHHHHHHHHHHHH-TCCEEEECSSCEEEESCCHHHHHHTTTTTCCCCCCBCCHHHHHTSCCSEEEE-CCCHH
T ss_pred EEecCCCHHHHHHHHHHHHHc-CCeEEEEeCCcEEEeCccHHHHHHHHHhhcccCCCccccchhccCceeEEEE-EeCHH
Confidence 555667889999999988764 2211111111111111111100011110000 00000001111122333322 22222
Q ss_pred HHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccchh
Q 041225 444 LVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQ 520 (658)
Q Consensus 444 ~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~ 520 (658)
....+.+.+.. ..+..+.+..+++.+.+.+|+.+++.++++ +++++++|||+.||++|++.||+||+| +++.+.
T Consensus 158 ~~~~~~~~~~~--~~~~~s~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~-~n~~~~ 234 (261)
T 2rbk_A 158 EEKEVLPSIPT--CEIGRWYPAFADVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAM-GQAKED 234 (261)
T ss_dssp HHHHHGGGSTT--CEEECSSTTCCEEESTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTSCHH
T ss_pred HHHHHHHhcCC--eEEEEecCCeEEecCCCCChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEe-cCccHH
Confidence 21222222221 345556677899999999999999999987 567899999999999999999999999 666667
Q ss_pred hhhhcccccccccc
Q 041225 521 AVMASDFAMGQFRF 534 (658)
Q Consensus 521 ~k~~AD~vl~~~~~ 534 (658)
++..||+++.+..-
T Consensus 235 ~~~~a~~v~~~~~~ 248 (261)
T 2rbk_A 235 VKAAADYVTAPIDE 248 (261)
T ss_dssp HHHHSSEECCCGGG
T ss_pred HHhhCCEEeccCch
Confidence 89999999887765
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=99.75 E-value=6.7e-18 Score=166.78 Aligned_cols=207 Identities=16% Similarity=0.121 Sum_probs=132.3
Q ss_pred HHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccC----CC--------------
Q 041225 300 AALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLT----PD-------------- 361 (658)
Q Consensus 300 ~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~----~~-------------- 361 (658)
++++|+||||+ . ...++ +++++|++|+++|++++++|||++..+..+...+++.. .+
T Consensus 4 li~~DlDGTLl-~---~~~~~-~~~~~l~~l~~~g~~~~i~Tgr~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~~~ 78 (249)
T 2zos_A 4 LIFLDIDKTLI-P---GYEPD-PAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVETPFISENGSAIFIPKGYFPFD 78 (249)
T ss_dssp EEEECCSTTTC-T---TSCSG-GGHHHHHHHHHTTEEEEEBCSSCHHHHHHHHHHHTCCSCEEETTTTEEECCTTCCC--
T ss_pred EEEEeCCCCcc-C---CCCcH-HHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCccEEEeCCeEEEccCCccccc
Confidence 46789999999 4 33454 49999999999999999999999999999988877532 22
Q ss_pred -------ccEEEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCc
Q 041225 362 -------MQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIAS 434 (658)
Q Consensus 362 -------~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 434 (658)
++++.....+.+.++++++.+.+...... +... ......... ..... ............
T Consensus 79 ~~~~~~~~~~i~~~~l~~~~~~~i~~~~~~~~~~~~----~~~~---~~~~~~~~~---~~~~~----~~~~~~~~~~~~ 144 (249)
T 2zos_A 79 VKGKEVGNYIVIELGIRVEKIREELKKLENIYGLKY----YGNS---TKEEIEKFT---GMPPE----LVPLAMEREYSE 144 (249)
T ss_dssp ----CCCCCCEEECSCCHHHHHHHHHHHHHHHTCEE----GGGS---CHHHHHHHH---CCCTT----THHHHHCCSSCE
T ss_pred ccccccCceEEEecCCCHHHHHHHHHHHHhhcCEEE----ecCC---CHHHHHHHh---CCChh----HhhhhhhhhhcC
Confidence 34555667788999999888776422110 0000 000010000 00000 000000001111
Q ss_pred EEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhc----CCCeEEEEcCCcCChhhhhhccee
Q 041225 435 LALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSR----TDDMTLAIGDGANDVSMIQMADVG 510 (658)
Q Consensus 435 ~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~----~~~~v~aiGDg~NDi~Ml~~A~vg 510 (658)
..+.....+.... +......+..+ ...+++.+ +.+|+.+++.|+++ +.++|+|||||.||++||+.||+|
T Consensus 145 ~~~~~~~~~~~~~----l~~~~~~~~~s-~~~~ei~~-g~sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~ 218 (249)
T 2zos_A 145 TIFEWSRDGWEEV----LVEGGFKVTMG-SRFYTVHG-NSDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKV 218 (249)
T ss_dssp EEEECSSSCHHHH----HHHTTCEEEEC-SSSEEEEC-SCCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEE
T ss_pred ceEecCCHHHHHH----HHhCCEEEEec-CCeEEEeC-CCChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcE
Confidence 1122222222222 22211233333 35789999 99999999999987 568999999999999999999999
Q ss_pred EEecCccc-hhhhhhcccccccc
Q 041225 511 VGICGQEG-RQAVMASDFAMGQF 532 (658)
Q Consensus 511 Iam~~~~~-~~~k~~AD~vl~~~ 532 (658)
||| +|+. +.+++.||+++.+.
T Consensus 219 va~-gna~~~~~~~~a~~v~~~~ 240 (249)
T 2zos_A 219 FIV-GSLKHKKAQNVSSIIDVLE 240 (249)
T ss_dssp EEE-SSCCCTTEEEESSHHHHHH
T ss_pred EEe-CCCCccccchhceEEeccc
Confidence 999 5555 66888899987654
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=99.75 E-value=1.5e-18 Score=168.71 Aligned_cols=194 Identities=16% Similarity=0.080 Sum_probs=128.2
Q ss_pred HHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCC----CccEEE--------
Q 041225 299 TAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTP----DMQQII-------- 366 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~----~~~~i~-------- 366 (658)
.++++|+||||++. +..+++++.++|++|+++|++++++|||++..+..+++.+++..+ ++..++
T Consensus 6 kli~~DlDGTLl~~---~~~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~ 82 (227)
T 1l6r_A 6 RLAAIDVDGNLTDR---DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKK 82 (227)
T ss_dssp CEEEEEHHHHSBCT---TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEE
T ss_pred EEEEEECCCCCcCC---CCcCCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCCeEEEeCCcEEEeCCCCEEE
Confidence 34679999999997 568999999999999999999999999999999999998886431 222222
Q ss_pred -EcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHH
Q 041225 367 -INGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLV 445 (658)
Q Consensus 367 -~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 445 (658)
.... +.++++ +.+.+.+ . ....+ .... .+ .+. .. . +.....+..
T Consensus 83 ~~~~l--~~~~~i-~~~~~~~-----~--~~~~~---------~~~~---~~------~~~---~~---~-~~~~~~~~~ 127 (227)
T 1l6r_A 83 FFSNE--GTNKFL-EEMSKRT-----S--MRSIL---------TNRW---RE------AST---GF---D-IDPEDVDYV 127 (227)
T ss_dssp SSCSH--HHHHHH-HHHTTTS-----S--CBCCG---------GGGG---CS------SSE---EE---B-CCGGGHHHH
T ss_pred EeccH--HHHHHH-HHHHHHh-----c--CCccc---------cccc---ee------ccc---ce---E-EecCCHHHH
Confidence 1111 334444 3333200 0 00000 0000 00 000 00 0 111111111
Q ss_pred HHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccchhhh
Q 041225 446 YILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAV 522 (658)
Q Consensus 446 ~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k 522 (658)
..+.+.+ ...+. +++.++++.+.+.+|+.+++.++++ +++++++||||.||++|++.|++||+| +++.+.++
T Consensus 128 ~~~~~~~---~~~~~-~~~~~~ei~~~~~~K~~~l~~l~~~~~~~~~~~~~iGD~~nD~~m~~~ag~~va~-~n~~~~~k 202 (227)
T 1l6r_A 128 RKEAESR---GFVIF-YSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKACP-ANATDNIK 202 (227)
T ss_dssp HHHHHTT---TEEEE-EETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHTSSSEEEEC-TTSCHHHH
T ss_pred HHHHHhc---CEEEE-ecCcEEEEecCCCCHHHHHHHHHHHhCcCHHHEEEECCcHHhHHHHHHcCceEEe-cCchHHHH
Confidence 1111111 12334 6677899999999999999999986 457899999999999999999999999 66667789
Q ss_pred hhcccccccccch
Q 041225 523 MASDFAMGQFRFL 535 (658)
Q Consensus 523 ~~AD~vl~~~~~l 535 (658)
..||+++.+.+.-
T Consensus 203 ~~a~~v~~~~~~~ 215 (227)
T 1l6r_A 203 AVSDFVSDYSYGE 215 (227)
T ss_dssp HHCSEECSCCTTH
T ss_pred HhCCEEecCCCCc
Confidence 9999998776543
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.72 E-value=3.2e-17 Score=164.40 Aligned_cols=219 Identities=16% Similarity=0.116 Sum_probs=126.1
Q ss_pred HHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccC-----CCccEE--------
Q 041225 299 TAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLT-----PDMQQI-------- 365 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~-----~~~~~i-------- 365 (658)
.++++|+||||++. ++.+.+++.++|++|+++|++++++|||++..+..+...+++.. .++..+
T Consensus 10 ~li~~DlDGTLl~~---~~~~~~~~~~~l~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~~~~~~ 86 (275)
T 1xvi_A 10 LLVFSDLDGTLLDS---HSYDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQGLPLIAENGAVIQLAEQWQE 86 (275)
T ss_dssp EEEEEECTTTTSCS---SCCSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCTTSCEEEGGGTEEECCTTCTT
T ss_pred eEEEEeCCCCCCCC---CCcCCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCeEEEeCCCeEEecCcccc
Confidence 45789999999986 45678899999999999999999999999999999998887532 344433
Q ss_pred ------EEcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEE
Q 041225 366 ------IINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALII 439 (658)
Q Consensus 366 ------~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 439 (658)
.....+.+.++++++.+.+..+....... ... ........ ..... ..............++.
T Consensus 87 ~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~--~~~---~~~~~~~~---~~~~~----~~~~~~~~~~~~~~~~~ 154 (275)
T 1xvi_A 87 IDGFPRIISGISHGEISLVLNTLREKEHFKFTTFD--DVD---DATIAEWT---GLSRS----QAALTQLHEASVTLIWR 154 (275)
T ss_dssp STTTTEEECSSCHHHHHHHHHHHHHHHCCCEEEGG--GSC---HHHHHHHH---CCCHH----HHHHHHCCSSCEEEEEC
T ss_pred cCceEEEecCCCHHHHHHHHHHHHHhhCcceeccC--cCC---HHHHHHhh---CCchH----HHHHHHhhccCceeEec
Confidence 33445677888888877654222111100 000 00000000 00000 00000000111112222
Q ss_pred eCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhc-C---CCe--EEEEcCCcCChhhhhhcceeEEe
Q 041225 440 DGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSR-T---DDM--TLAIGDGANDVSMIQMADVGVGI 513 (658)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~-~---~~~--v~aiGDg~NDi~Ml~~A~vgIam 513 (658)
...+....+.+.+......+.. ++..+++.+.+++|+.+++.++++ + .++ +++|||+.||++||+.|++||||
T Consensus 155 ~~~~~~~~~~~~l~~~~~~~~~-~~~~leI~~~~~~K~~~l~~l~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~ 233 (275)
T 1xvi_A 155 DSDERMAQFTARLNELGLQFMQ-GARFWHVLDASAGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYAVIV 233 (275)
T ss_dssp SCHHHHHHHHHHHHHTTEEEEE-CSSCEEEEETTCCHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEEEEC
T ss_pred CCHHHHHHHHHHHHhhCeEEEE-CCceEEEecCCCCHHHHHHHHHHHhhhcccccCcEEEECCChhhHHHHHhCCceEEe
Confidence 2222333333333322223333 356799999999999999999875 2 456 99999999999999999999999
Q ss_pred cCccc---hhhhhh--cc-cccccccc
Q 041225 514 CGQEG---RQAVMA--SD-FAMGQFRF 534 (658)
Q Consensus 514 ~~~~~---~~~k~~--AD-~vl~~~~~ 534 (658)
+|+. +.+++. || +++.+.+.
T Consensus 234 -~n~~~~~~~~~~~~~a~~~v~~~~~~ 259 (275)
T 1xvi_A 234 -KGLNREGVHLHDEDPARVWRTQREGP 259 (275)
T ss_dssp -CCCC----------------------
T ss_pred -cCCCccchhhccccCCceeEccCCCc
Confidence 5543 445543 78 77765543
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=99.70 E-value=1.2e-17 Score=163.65 Aligned_cols=190 Identities=13% Similarity=0.133 Sum_probs=117.3
Q ss_pred HHhhhccceeeeccc--cccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHc-CccCCCccEEEEcCC------
Q 041225 300 AALIECDLTLLGATG--IEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSC-KLLTPDMQQIIINGN------ 370 (658)
Q Consensus 300 ~~~~d~DgTllg~~~--~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~-gl~~~~~~~i~~~g~------ 370 (658)
++++|+||||++... -...+++++.++|++|+++| +|+++|||++..+..+...+ .++..++..+..++.
T Consensus 3 li~~DlDGTLl~~~~~~~~~~i~~~~~~al~~l~~~g-~v~iaTGR~~~~~~~~~~~l~~~I~~nGa~i~~~~~~~~~~~ 81 (239)
T 1u02_A 3 LIFLDYDGTLVPIIMNPEESYADAGLLSLISDLKERF-DTYIVTGRSPEEISRFLPLDINMICYHGACSKINGQIVYNNG 81 (239)
T ss_dssp EEEEECBTTTBCCCSCGGGCCCCHHHHHHHHHHHHHS-EEEEECSSCHHHHHHHSCSSCEEEEGGGTEEEETTEEEECTT
T ss_pred EEEEecCCCCcCCCCCcccCCCCHHHHHHHHHHhcCC-CEEEEeCCCHHHHHHHhccchheEEECCEEEeeCCeeeeccc
Confidence 357899999998421 02368899999999999999 99999999999988876554 233344444443221
Q ss_pred -------CHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCcc
Q 041225 371 -------SEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNS 443 (658)
Q Consensus 371 -------~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 443 (658)
+.+.++++++.+......... ... ..+. ..+..... . ...
T Consensus 82 ~~~~~~l~~~~~~~i~~~~~~~~~~~~~--~~~-~~~~-------------~~~~~~~~---~--------------~~~ 128 (239)
T 1u02_A 82 SDRFLGVFDRIYEDTRSWVSDFPGLRIY--RKN-LAVL-------------YHLGLMGA---D--------------MKP 128 (239)
T ss_dssp GGGGHHHHHHHHHHHTTHHHHSTTCEEE--EET-TEEE-------------EECTTSCS---T--------------THH
T ss_pred ccccchhhHHHHHHHHHHHhhCCCcEEE--ecC-CEEE-------------EEcCCCCh---h--------------HHH
Confidence 122333333333321110000 000 0000 00000000 0 001
Q ss_pred HHHHHHHhhHH-hhhhhhccCCeeEEEEcCcccHHHHHHHHHhcCCCeEEEEcCCcCChhhhhhc--ceeEEecCccchh
Q 041225 444 LVYILEKDLES-DLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMA--DVGVGICGQEGRQ 520 (658)
Q Consensus 444 ~~~~~~~~~~~-~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~~~~~v~aiGDg~NDi~Ml~~A--~vgIam~~~~~~~ 520 (658)
....+...+.. .... +.+++.++++.+.+.+|+.+++.|+++- . |++||||.||++||+.| ++|||| +|+
T Consensus 129 ~~~~~~~~l~~~~~~~-~~~~~~~lei~~~~~~Kg~al~~l~~~~-g-via~GD~~ND~~Ml~~a~~g~~vam-~Na--- 201 (239)
T 1u02_A 129 KLRSRIEEIARIFGVE-TYYGKMIIELRVPGVNKGSAIRSVRGER-P-AIIAGDDATDEAAFEANDDALTIKV-GEG--- 201 (239)
T ss_dssp HHHHHHHHHHHHHTCE-EEECSSEEEEECTTCCHHHHHHHHHTTS-C-EEEEESSHHHHHHHHTTTTSEEEEE-SSS---
T ss_pred HHHHHHHHHhccCCcE-EEeCCcEEEEEcCCCCHHHHHHHHHhhC-C-eEEEeCCCccHHHHHHhhCCcEEEE-CCC---
Confidence 11122222222 1122 3456778999999999999999999983 3 99999999999999999 999999 555
Q ss_pred hhhhccccccc
Q 041225 521 AVMASDFAMGQ 531 (658)
Q Consensus 521 ~k~~AD~vl~~ 531 (658)
+..||+++.+
T Consensus 202 -~~~A~~v~~~ 211 (239)
T 1u02_A 202 -ETHAKFHVAD 211 (239)
T ss_dssp -CCCCSEEESS
T ss_pred -CCcceEEeCC
Confidence 5789998876
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=2.4e-17 Score=164.05 Aligned_cols=216 Identities=13% Similarity=0.134 Sum_probs=130.4
Q ss_pred HHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHH--------cCccCCCccEEEEcC-
Q 041225 299 TAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALS--------CKLLTPDMQQIIING- 369 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~--------~gl~~~~~~~i~~~g- 369 (658)
.++++|+||||++. +..++++++++|++|+++ ++|+++|||++..+...... ..++..+|..++.++
T Consensus 14 kli~~DlDGTLl~~---~~~is~~~~~al~~l~~~-i~v~iaTGR~~~~~~~~l~~~~~~~~~~~~~I~~NGa~i~~~~~ 89 (262)
T 2fue_A 14 VLCLFDVDGTLTPA---RQKIDPEVAAFLQKLRSR-VQIGVVGGSDYCKIAEQLGDGDEVIEKFDYVFAENGTVQYKHGR 89 (262)
T ss_dssp EEEEEESBTTTBST---TSCCCHHHHHHHHHHTTT-SEEEEECSSCHHHHHHHHSSTTTHHHHCSEEEEGGGTEEEETTE
T ss_pred EEEEEeCccCCCCC---CCcCCHHHHHHHHHHHhC-CEEEEEcCCCHHHHHHHHhhhhcccccCCeEEECCCcEEEeCCe
Confidence 56789999999997 558999999999999999 99999999999877655432 123444555544332
Q ss_pred ----------CCHHHHHHHHHHHHHh-cCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEE
Q 041225 370 ----------NSEEECKDLLADAKAR-YGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALI 438 (658)
Q Consensus 370 ----------~~~~~~~~ii~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 438 (658)
.+.+.++++++.+.+. ........ ...+....... .. .............. ++...
T Consensus 90 ~i~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~-----~~---~~~~~~~~~~~~~~---~~~~~ 156 (262)
T 2fue_A 90 LLSKQTIQNHLGEELLQDLINFCLSYMALLRLPKK--RGTFIEFRNGM-----LN---ISPIGRSCTLEERI---EFSEL 156 (262)
T ss_dssp ECCCCCHHHHHCHHHHHHHHHHHHHHHHTCCCSCC--CSCSEEECSSC-----EE---ECSSCTTCCHHHHH---HHHHH
T ss_pred EEEEeeccccCCHHHHHHHHHHHHHcCceEEEEeC--CeEEEechHHh-----hh---HHhhcCCCcccccc---cEEEE
Confidence 2467788888776653 11111100 00000000000 00 00000000000000 00000
Q ss_pred EeCccHHHHHHHhhHHhh----hhhhccCCeeEEEEcCcccHHHHHHHHHhcCCCeEEEEcC----CcCChhhhhhcc-e
Q 041225 439 IDGNSLVYILEKDLESDL----FDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGD----GANDVSMIQMAD-V 509 (658)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~----~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~~~~~v~aiGD----g~NDi~Ml~~A~-v 509 (658)
.........+.+.+...+ ..+..+++.++++.+.+++|+.+++.|...+.++|+|||| |.||++||+.|+ .
T Consensus 157 ~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~leI~~~~vsKg~al~~l~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~ 236 (262)
T 2fue_A 157 DKKEKIREKFVEALKTEFAGKGLRFSRGGMISFDVFPEGWDKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTV 236 (262)
T ss_dssp HHHHCHHHHHHHHHHHHTTTSCEEEECCSSSCEEEEETTCSTTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSE
T ss_pred cCCHHHHHHHHHHHHHhCCCceEEEEECCCcEEEEecCCCCHHHHHHHHHCCCHHHEEEECCCCCCCCCCHHHHhcCccC
Confidence 000111111112222222 2233345668999999999999999992227789999999 999999999999 5
Q ss_pred eEEecCccchhhhhhcccccccc
Q 041225 510 GVGICGQEGRQAVMASDFAMGQF 532 (658)
Q Consensus 510 gIam~~~~~~~~k~~AD~vl~~~ 532 (658)
|++| +|+.+.+|+.||+++.+.
T Consensus 237 g~av-~NA~~~~k~~a~~v~~~~ 258 (262)
T 2fue_A 237 GHSV-VSPQDTVQRCREIFFPET 258 (262)
T ss_dssp EEEC-SSHHHHHHHHHHHHCTTC
T ss_pred cEEe-cCCCHHHHHhhheeCCCC
Confidence 9999 888888999999998654
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=1.9e-18 Score=169.85 Aligned_cols=210 Identities=12% Similarity=0.095 Sum_probs=126.6
Q ss_pred HHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHH------cCccCCC-------ccEE
Q 041225 299 TAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALS------CKLLTPD-------MQQI 365 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~------~gl~~~~-------~~~i 365 (658)
+++++|+||||++. +..++++++++|++|+++|++++++|||++......... ..++..+ ++++
T Consensus 5 kli~~DlDGTLl~~---~~~i~~~~~~~l~~l~~~g~~~~iaTGR~~~~~~~~l~~~~~~~~~~~i~~NGa~i~~~~~~i 81 (246)
T 3f9r_A 5 VLLLFDVDGTLTPP---RLCQTDEMRALIKRARGAGFCVGTVGGSDFAKQVEQLGRDVLTQFDYVFAENGLLAYRNGLEI 81 (246)
T ss_dssp EEEEECSBTTTBST---TSCCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHCTTHHHHCSEEEEGGGTEEEETTEEE
T ss_pred eEEEEeCcCCcCCC---CCccCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHhhhhccccCCEEEECCCcEEEECCEEE
Confidence 45689999999997 558999999999999999999999999999865433221 0122233 3344
Q ss_pred EEcC----CCHHHHHHHHHHHHHhc-CcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEe
Q 041225 366 IING----NSEEECKDLLADAKARY-GVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIID 440 (658)
Q Consensus 366 ~~~g----~~~~~~~~ii~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 440 (658)
+... .+.+.++++++...+.. ...... ....+...... ...+................ ..+
T Consensus 82 ~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~----~~~ 147 (246)
T 3f9r_A 82 HRQSLLNALGNDRIVKFVKKTLRLIADLDIPV--QRGTFVEYRNG--------MINVSPIGRNCSQAERDEFE----VYD 147 (246)
T ss_dssp EECCHHHHTCHHHHHHHHHHHHHHHHTCCCSC--CCSCCEEECSS--------CEEECSSCTTSCHHHHHHHH----HHH
T ss_pred EEeeccccCCHHHHHHHHHHHHhhhhceeeec--CCceEEEeecc--------eeccccccccCchhhceeee----Eec
Confidence 4444 34888888888766531 111110 00000000000 00000000000000000000 000
Q ss_pred Cc-cHHHHHHHhhHHhh----hhhhccCCeeEEEEcCcccHHHHHHHHHhcCCCeEEEEcC----CcCChhhhhhcc-ee
Q 041225 441 GN-SLVYILEKDLESDL----FDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGD----GANDVSMIQMAD-VG 510 (658)
Q Consensus 441 ~~-~~~~~~~~~~~~~~----~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~~~~~v~aiGD----g~NDi~Ml~~A~-vg 510 (658)
.. .....+.+.+...+ ..+..+++.++++.+.+++|+.+++.|++ +.++|+|||| |.||++||+.|+ +|
T Consensus 148 ~~~~~~~~~~~~l~~~~~~~~~~~~~sg~~~leI~~~gv~Kg~al~~L~~-~~~ev~afGD~~~~g~NDi~Ml~~a~~~g 226 (246)
T 3f9r_A 148 NEHRVRASLIAELENSFPDFGLKYSIGGQISFDVFPVGWDKTYCLQFVED-DFEEIHFFGDKTQEGGNDYEIYTDKRTIG 226 (246)
T ss_dssp HHHCHHHHHHHHHHHHCGGGCEEEEEETTTEEEEEETTCSGGGGGGGTTT-TCSEEEEEESCCSTTSTTHHHHTCTTSEE
T ss_pred ccchHHHHHHHHHHhhCcCCcEEEEecCCeEEEEEeCCCCHHHHHHHHHc-CcccEEEEeCCCCCCCCCHHHHhCCCccE
Confidence 10 01122223333333 23467888999999999999999999999 7899999999 699999999996 89
Q ss_pred EEecCccchhhhhhccc
Q 041225 511 VGICGQEGRQAVMASDF 527 (658)
Q Consensus 511 Iam~~~~~~~~k~~AD~ 527 (658)
++| +|+.+.+|..+.+
T Consensus 227 ~~v-~n~~~~~~~~~~~ 242 (246)
T 3f9r_A 227 HKV-TSYKDTIAEVEKI 242 (246)
T ss_dssp EEC-SSHHHHHHHHHHH
T ss_pred EEe-CCHHHHHHHHHHH
Confidence 999 6666666665544
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.69 E-value=2.8e-18 Score=157.02 Aligned_cols=127 Identities=23% Similarity=0.260 Sum_probs=99.7
Q ss_pred CChhHHHHHHHHHHcCcEEEEEcCCeEEEEeCCcEEEEEEEEeeCCCCCCCeeEEEEEcCCCcEEEEEeCCchHhHHhhh
Q 041225 156 ESPDEQALVSAASAYGYTLFERTSGHIVIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADSSMFNILA 235 (658)
Q Consensus 156 ~~p~e~al~~~a~~~g~~~~~~~~~~~~~~~~g~~~~~~il~~~~F~s~rk~msviv~~~~~~~~l~~KGa~e~i~~~~~ 235 (658)
.+|+|.||++++...+.. .....|+++..+||+|.|||||++++.+++.+.+|+|||||.|+++|+
T Consensus 33 ~n~~d~Ail~~~~~~~~~--------------~~~~~~~~~~eiPFds~rKrmsvv~~~~~g~~~l~~KGApE~IL~~C~ 98 (170)
T 3gwi_A 33 KNLLDTAVLEGTDEESAR--------------SLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLVCKGALQEILNVCS 98 (170)
T ss_dssp CCHHHHHHHHTSCHHHHH--------------HHHHHSEEEEEECCCTTTCEEEEEEESSSSEEEEEEEECHHHHHTTEE
T ss_pred CChHHHHHHHHHHhcChh--------------hhhhcCeEEeeEecCcccCcEEEEEEeCCCCEEEEEcCCcHHHHHHhH
Confidence 499999999987542210 012246788999999999999999998888899999999999999998
Q ss_pred cCc------cccHHHHHHHHHHHHHHhhcCCeEEEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhcccee
Q 041225 236 KDS------KRNDLIRHITQSHLSEYSSQGLRTLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTL 309 (658)
Q Consensus 236 ~~~------~~~~~~~~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTl 309 (658)
... ..++..++.+.+.++.|+.+|+|||++|+|.++..+.. .....|.|+||
T Consensus 99 ~~~~~g~~~~l~~~~~~~i~~~~~~la~~GlRvLavA~k~~~~~~~~----------------------~~~~~E~~L~f 156 (170)
T 3gwi_A 99 QVRHNGEIVPLDDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREGD----------------------YQRADESDLIL 156 (170)
T ss_dssp EEEETTEEEECCHHHHHHHHHHHHHHHHTTCEEEEEEEEEEECCSSC----------------------CCGGGSCSEEE
T ss_pred HHhcCCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEEEEECCCCccc----------------------cCccccCCcEE
Confidence 532 24567788999999999999999999999998654210 00124789999
Q ss_pred eeccccccc
Q 041225 310 LGATGIEDK 318 (658)
Q Consensus 310 lg~~~~~d~ 318 (658)
+|.+|+-|.
T Consensus 157 ~G~~g~~~~ 165 (170)
T 3gwi_A 157 EGYIAFLDH 165 (170)
T ss_dssp EEEEEEEC-
T ss_pred Eehhccccc
Confidence 999997654
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.69 E-value=9e-17 Score=156.80 Aligned_cols=192 Identities=17% Similarity=0.170 Sum_probs=129.5
Q ss_pred HHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCC---------
Q 041225 300 AALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGN--------- 370 (658)
Q Consensus 300 ~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~--------- 370 (658)
++++|+||||++. +..+++.+.++|++++++|++++++|||++..+..+...+|+..+ .+..||.
T Consensus 5 li~~DlDGTLl~~---~~~i~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~~~---~i~~nGa~i~~~~~~~ 78 (231)
T 1wr8_A 5 AISIDIDGTITYP---NRMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGP---VVAEDGGAISYKKKRI 78 (231)
T ss_dssp EEEEESTTTTBCT---TSCBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSC---EEEGGGTEEEETTEEE
T ss_pred EEEEECCCCCCCC---CCcCCHHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCCCe---EEEeCCcEEEeCCEEE
Confidence 4678999999997 558999999999999999999999999999999999888876321 2332321
Q ss_pred ---CHHHHHHHHHHHHHhc-CcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHH
Q 041225 371 ---SEEECKDLLADAKARY-GVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVY 446 (658)
Q Consensus 371 ---~~~~~~~ii~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 446 (658)
..+.++++++.++..+ +..... . .. + ....+. +........
T Consensus 79 ~~~~l~~~~~i~~~~~~~~~~~~~~~---~-------~~-----------~-------------~~~~~~-~~~~~~~~~ 123 (231)
T 1wr8_A 79 FLASMDEEWILWNEIRKRFPNARTSY---T-------MP-----------D-------------RRAGLV-IMRETINVE 123 (231)
T ss_dssp ESCCCSHHHHHHHHHHHHCTTCCBCT---T-------GG-----------G-------------CSSCEE-ECTTTSCHH
T ss_pred EeccHHHHHHHHHHHHHhCCCceEEe---c-------CC-----------C-------------ceeeEE-EECCCCCHH
Confidence 0055666666655222 211100 0 00 0 000111 122010111
Q ss_pred HHHHhhHH--hhhhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccchhh
Q 041225 447 ILEKDLES--DLFDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQA 521 (658)
Q Consensus 447 ~~~~~~~~--~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~ 521 (658)
.....++. ....+. +++..+++.+.+.+|+.+++.++++ +++++++|||+.||++|++.||+||+| +++.+.+
T Consensus 124 ~~~~~~~~~~~~~~~~-~~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~-~~~~~~~ 201 (231)
T 1wr8_A 124 TVREIINELNLNLVAV-DSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYKVAV-AQAPKIL 201 (231)
T ss_dssp HHHHHHHHTTCSCEEE-ECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECSGGGHHHHHHSSEEEEC-TTSCHHH
T ss_pred HHHHHHHhcCCcEEEE-ecCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEe-cCCCHHH
Confidence 11111111 113334 5566789999999999999999886 567899999999999999999999999 5566678
Q ss_pred hhhcccccccccc
Q 041225 522 VMASDFAMGQFRF 534 (658)
Q Consensus 522 k~~AD~vl~~~~~ 534 (658)
+..||+++.+...
T Consensus 202 ~~~a~~v~~~~~e 214 (231)
T 1wr8_A 202 KENADYVTKKEYG 214 (231)
T ss_dssp HTTCSEECSSCHH
T ss_pred HhhCCEEecCCCc
Confidence 8899999877654
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=2.2e-16 Score=156.98 Aligned_cols=206 Identities=16% Similarity=0.149 Sum_probs=130.4
Q ss_pred HhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCc----cCCCcc-------------
Q 041225 301 ALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKL----LTPDMQ------------- 363 (658)
Q Consensus 301 ~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl----~~~~~~------------- 363 (658)
+++|+||||++. . .+.+.+.++|++++++|++++++|||++..+. .+|+ +..++.
T Consensus 3 i~~DlDGTLl~~---~-~i~~~~~~al~~l~~~Gi~v~iaTGR~~~~~~----~l~~~~~~i~~nGa~i~~~~~~~~~~~ 74 (259)
T 3zx4_A 3 VFTDLDGTLLDE---R-GELGPAREALERLRALGVPVVPVTAKTRKEVE----ALGLEPPFIVENGGGLYLPRDWPVRAG 74 (259)
T ss_dssp EEECCCCCCSCS---S-SSCSTTHHHHHHHHHTTCCEEEBCSSCHHHHH----HTTCCSSEEEGGGTEEEEETTCSSCCS
T ss_pred EEEeCCCCCcCC---C-cCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHH----HcCCCCcEEEECCcEEEeCCCCccccc
Confidence 468999999997 4 78999999999999999999999999998877 5554 222222
Q ss_pred ------EEEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEE
Q 041225 364 ------QIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLAL 437 (658)
Q Consensus 364 ------~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 437 (658)
.+.....+.+.+.++++.+.+.++....... ... ........ ...... ... .........+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~---~~~~~~~~---~~~~~~----~~~-~~~~~~~~~~ 141 (259)
T 3zx4_A 75 RPKGGYRVVSLAWPYRKVRARLREAEALAGRPILGYG--DLT---AEAVARLT---GLSREA----ARR-AKAREYDETL 141 (259)
T ss_dssp EEETTEEEEECSCCHHHHHHHHHHHHHHHTSCCCBGG--GBC---HHHHHHHH---CCCHHH----HHH-HTCCSSCEEB
T ss_pred ccCCceEEEEcCCCHHHHHHHHHHHHHhcCceEEEcC--CCC---HHHHHHHc---CCCHHH----hhh-hhccccceeE
Confidence 4445566788899999888764433221111 100 00110000 000000 000 0000001111
Q ss_pred EEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhc---CC--CeEEEEcCCcCChhhhhhcceeEE
Q 041225 438 IIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TD--DMTLAIGDGANDVSMIQMADVGVG 512 (658)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~--~~v~aiGDg~NDi~Ml~~A~vgIa 512 (658)
....+ ....+.+.+......++.+. .++++.+. .+|+.+++.++++ +. +++++|||+.||++|++.||+|||
T Consensus 142 ~~~~~-~~~~~~~~l~~~~~~~~~s~-~~~ei~~~-~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va 218 (259)
T 3zx4_A 142 VLCPE-EVEAVLEALEAVGLEWTHGG-RFYHAAKG-ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVY 218 (259)
T ss_dssp CCCTT-THHHHHHHHHHTTCEEEECS-SSEEEESS-CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEE
T ss_pred EeCcH-HHHHHHHHHHHCCcEEEecC-ceEEEcCC-CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEE
Confidence 11223 33444444444334444444 35699998 9999999999988 34 889999999999999999999999
Q ss_pred ecCccchhhhhhcccccccccc
Q 041225 513 ICGQEGRQAVMASDFAMGQFRF 534 (658)
Q Consensus 513 m~~~~~~~~k~~AD~vl~~~~~ 534 (658)
| +|+.+ + .|+++..+...
T Consensus 219 ~-~na~~-~--~~~~~~~~~~~ 236 (259)
T 3zx4_A 219 V-GRGDP-P--EGVLATPAPGP 236 (259)
T ss_dssp C-SSSCC-C--TTCEECSSCHH
T ss_pred e-CChhh-c--CCcEEeCCCCc
Confidence 9 55554 4 67788766543
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=1.2e-16 Score=157.24 Aligned_cols=203 Identities=13% Similarity=0.129 Sum_probs=126.6
Q ss_pred HHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCC--------C
Q 041225 300 AALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGN--------S 371 (658)
Q Consensus 300 ~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~--------~ 371 (658)
++++|+||||++.- ..+ +.+.++|++++ +|++|+++|||++..+..+.+.+++..+ +.+|..||. +
T Consensus 5 li~~DlDGTLl~~~---~~~-~~~~~~l~~~~-~gi~v~iaTGR~~~~~~~~~~~l~l~~~-~~~I~~NGa~i~~~~~~~ 78 (244)
T 1s2o_A 5 LLISDLDNTWVGDQ---QAL-EHLQEYLGDRR-GNFYLAYATGRSYHSARELQKQVGLMEP-DYWLTAVGSEIYHPEGLD 78 (244)
T ss_dssp EEEECTBTTTBSCH---HHH-HHHHHHHHTTG-GGEEEEEECSSCHHHHHHHHHHHTCCCC-SEEEETTTTEEEETTEEC
T ss_pred EEEEeCCCCCcCCH---HHH-HHHHHHHHHhc-CCCEEEEEcCCCHHHHHHHHHHcCCCCC-CEEEECCCcEEEeCCCcC
Confidence 45789999999852 233 57778888855 6899999999999999999998776422 335555554 2
Q ss_pred HHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccH---HHHH
Q 041225 372 EEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSL---VYIL 448 (658)
Q Consensus 372 ~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~~ 448 (658)
......+ ...+ . ........... ...... .. ...+..++.+....... ...+
T Consensus 79 ~~~~~~~----~~~~--------------~-~~~~~~~~~~~----~~~~~~-~~-~~~~~~ki~~~~~~~~~~~~~~~l 133 (244)
T 1s2o_A 79 QHWADYL----SEHW--------------Q-RDILQAIADGF----EALKPQ-SP-LEQNPWKISYHLDPQACPTVIDQL 133 (244)
T ss_dssp HHHHHHH----HTTC--------------C-HHHHHHHHHTC----TTEEEC-CG-GGCBTTBEEEEECTTSCTHHHHHH
T ss_pred hHHHHHH----hccc--------------c-HHHHHHHHHhc----cCcccc-Cc-ccCCCeEEEEEeChhhHHHHHHHH
Confidence 2211111 0000 0 00001111000 000000 00 01223445554443322 2222
Q ss_pred HHhhHHh--hhhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhh
Q 041225 449 EKDLESD--LFDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVM 523 (658)
Q Consensus 449 ~~~~~~~--~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~ 523 (658)
.+.+... ...+..+.+.++++.+.+++|+.+++.++++ +.+++++|||+.||++|++.|++||+| +++.+.+++
T Consensus 134 ~~~~~~~~~~~~~~~s~~~~lei~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~~g~~va~-~na~~~~k~ 212 (244)
T 1s2o_A 134 TEMLKETGIPVQVIFSSGKDVDLLPQRSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIV-RNAQPELLH 212 (244)
T ss_dssp HHHHHTSSCCEEEEEETTTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEEC-TTCCHHHHH
T ss_pred HHHHHhcCCCeEEEEecCceEEeccCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHhccCcEEEE-cCCcHHHHH
Confidence 2222211 1334456677899999999999999999987 557899999999999999999999999 667777888
Q ss_pred h-------cccccccccc
Q 041225 524 A-------SDFAMGQFRF 534 (658)
Q Consensus 524 ~-------AD~vl~~~~~ 534 (658)
. ||+++.+...
T Consensus 213 ~a~~~~~~a~~v~~~~~~ 230 (244)
T 1s2o_A 213 WYDQWGDSRHYRAQSSHA 230 (244)
T ss_dssp HHHHHCCTTEEECSSCHH
T ss_pred HHhcccccceeecCCcch
Confidence 5 7898876654
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=99.67 E-value=4.4e-17 Score=160.70 Aligned_cols=211 Identities=13% Similarity=0.123 Sum_probs=124.1
Q ss_pred HHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHH-H----c-CccCCCccEE-------
Q 041225 299 TAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIAL-S----C-KLLTPDMQQI------- 365 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~-~----~-gl~~~~~~~i------- 365 (658)
+++++|+||||++. +..++++++++|++|+++ ++|+++|||++..+..... . . .++..+|..+
T Consensus 7 kli~~DlDGTLl~~---~~~i~~~~~~al~~l~~~-i~v~iaTGR~~~~~~~~l~~~~~~~~~~~I~~NGa~i~~~~~~i 82 (246)
T 2amy_A 7 ALCLFDVDGTLTAP---RQKITKEMDDFLQKLRQK-IKIGVVGGSDFEKVQEQLGNDVVEKYDYVFPENGLVAYKDGKLL 82 (246)
T ss_dssp EEEEEESBTTTBCT---TSCCCHHHHHHHHHHTTT-SEEEEECSSCHHHHHHHHCTTHHHHCSEEESGGGTEEEETTEEE
T ss_pred eEEEEECCCCcCCC---CcccCHHHHHHHHHHHhC-CeEEEEcCCCHHHHHHHhccccccccCEEEECCCcEEEeCCcEE
Confidence 45789999999997 558999999999999999 9999999999876443322 0 1 2333444333
Q ss_pred EEcC----CCHHHHHHHHHHHHHh---cCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEE
Q 041225 366 IING----NSEEECKDLLADAKAR---YGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALI 438 (658)
Q Consensus 366 ~~~g----~~~~~~~~ii~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 438 (658)
+... .+.+.++++++.+.+. +........+ ....... .....+. ......... ++...
T Consensus 83 ~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~----~~~~~~~-----~~~~~~~---~~~~~~~~~---~~~~~ 147 (246)
T 2amy_A 83 CRQNIQSHLGEALIQDLINYCLSYIAKIKLPKKRGTF----IEFRNGM-----LNVSPIG---RSCSQEERI---EFYEL 147 (246)
T ss_dssp EECCHHHHHCHHHHHHHHHHHHHHHHHCCCSCCCSCS----EEEETTE-----EEECSSC---TTCCHHHHH---HHHHH
T ss_pred EeeecccccCHHHHHHHHHHHHhcCceEEEecCCcee----Eecccce-----eehhhhc---CcCchhhhh---hheee
Confidence 3333 2678888888877653 1111110000 0000000 0000000 000000000 00000
Q ss_pred EeCccHHHHHHHhhHHhh----hhhhccCCeeEEEEcCcccHHHHHHHHHhcCCCeEEEEcC----CcCChhhhhhcce-
Q 041225 439 IDGNSLVYILEKDLESDL----FDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGD----GANDVSMIQMADV- 509 (658)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~----~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~~~~~v~aiGD----g~NDi~Ml~~A~v- 509 (658)
.........+.+.+...+ ..+..+++.++++.+.+++|+.+++.|...+.++|+|||| |.||++||+.|+.
T Consensus 148 ~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~leI~~~~~~Kg~al~~l~~i~~~~viafGD~~~~~~ND~~Ml~~a~~a 227 (246)
T 2amy_A 148 DKKENIRQKFVADLRKEFAGKGLTFSIGGQISFDVFPDGWDKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTM 227 (246)
T ss_dssp HHHHCHHHHHHHHHHHHTTTSCEEEEEETTTEEEEEETTCSGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEE
T ss_pred cCCHHHHHHHHHHHHHhcCCCcEEEEEcCCcEEEEecCCCchHHHHHHHhCCCHHHEEEECCCCCCCCCcHHHHHhCCcc
Confidence 000111111112222222 2233345678999999999999999992227789999999 9999999999998
Q ss_pred eEEecCccchhhhhhccccc
Q 041225 510 GVGICGQEGRQAVMASDFAM 529 (658)
Q Consensus 510 gIam~~~~~~~~k~~AD~vl 529 (658)
|++| +|+.+.+|+.||+|.
T Consensus 228 g~av-~Na~~~vk~~A~~v~ 246 (246)
T 2amy_A 228 GYSV-TAPEDTRRICELLFS 246 (246)
T ss_dssp EEEC-SSHHHHHHHHHHHCC
T ss_pred eEEe-eCCCHHHHHHHhhcC
Confidence 9999 778888999999873
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=99.64 E-value=4.8e-16 Score=157.70 Aligned_cols=144 Identities=13% Similarity=0.086 Sum_probs=99.0
Q ss_pred ccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCcccc
Q 041225 316 EDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTK 395 (658)
Q Consensus 316 ~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~ 395 (658)
..+++|++.++++.|+++|+++.|+||+...++.++++++|+...+..++. +.... ..
T Consensus 139 ~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~~i~~-n~l~~------------------~~--- 196 (297)
T 4fe3_A 139 DVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVS-NFMDF------------------DE--- 196 (297)
T ss_dssp CCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTEEEEE-ECEEE------------------CT---
T ss_pred CCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccceEEe-eeEEE------------------cc---
Confidence 458999999999999999999999999999999999999998655432221 11000 00
Q ss_pred ccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCccc
Q 041225 396 CNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQ 475 (658)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~ 475 (658)
........++. ...+....|.+
T Consensus 197 -------------------------------------~~~~~~~~~~~---------------------i~~~~k~~~~~ 218 (297)
T 4fe3_A 197 -------------------------------------NGVLKGFKGEL---------------------IHVFNKHDGAL 218 (297)
T ss_dssp -------------------------------------TSBEEEECSSC---------------------CCTTCHHHHHH
T ss_pred -------------------------------------cceeEeccccc---------------------cchhhcccHHH
Confidence 00000000000 00122233445
Q ss_pred HHHHHHHHHhcCCCeEEEEcCCcCChhhhh---hcceeEEecC------ccchhhhhhcccccccccchHHHHh
Q 041225 476 KAGIVDLIKSRTDDMTLAIGDGANDVSMIQ---MADVGVGICG------QEGRQAVMASDFAMGQFRFLKRLLL 540 (658)
Q Consensus 476 K~~~v~~L~~~~~~~v~aiGDg~NDi~Ml~---~A~vgIam~~------~~~~~~k~~AD~vl~~~~~l~~l~l 540 (658)
|...+..+++. +..|+++|||.||+||++ .|++||+|.- +..+.++++||+|+.++++...+..
T Consensus 219 k~~~~~~~~~~-~~~v~~vGDGiNDa~m~k~l~~advgiaiGfl~~~v~~~~d~~~e~~Divl~~d~~~~v~~~ 291 (297)
T 4fe3_A 219 KNTDYFSQLKD-NSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVKEESLEVVNS 291 (297)
T ss_dssp TCHHHHHHTTT-CCEEEEEESSGGGGGTTTTCSCCSEEEEEEEECSSHHHHHHHHHHHSSEEEETCCBCHHHHH
T ss_pred HHHHHHHhhcc-CCEEEEEeCcHHHHHHHhCccccCeEEEEEecchhHHHhHHHHHhhCCEEEECCCChHHHHH
Confidence 66666666655 678999999999999955 8999999931 4555679999999999999877643
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=99.49 E-value=3.1e-14 Score=132.89 Aligned_cols=150 Identities=13% Similarity=0.055 Sum_probs=110.2
Q ss_pred HHHhhhccceeeeccccc-------cccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCC
Q 041225 299 TAALIECDLTLLGATGIE-------DKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNS 371 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~-------d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~ 371 (658)
..+++|+||||+.....- ..+.+++.++|++|+++|++++++||++...+..+++.+|+...
T Consensus 9 k~i~~DlDGTL~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~~----------- 77 (180)
T 1k1e_A 9 KFVITDVDGVLTDGQLHYDANGEAIKSFHVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKLF----------- 77 (180)
T ss_dssp CEEEEECTTTTSCSEEEEETTEEEEEEEEHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCEE-----------
T ss_pred eEEEEeCCCCcCCCCeeeccCcceeeeeccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCcee-----------
Confidence 456799999999752110 13556788999999999999999999999999999998887310
Q ss_pred HHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHh
Q 041225 372 EEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKD 451 (658)
Q Consensus 372 ~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 451 (658)
T Consensus 78 -------------------------------------------------------------------------------- 77 (180)
T 1k1e_A 78 -------------------------------------------------------------------------------- 77 (180)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhcccc
Q 041225 452 LESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFA 528 (658)
Q Consensus 452 ~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~v 528 (658)
+ .....|..+++.+++. +++++++|||+.||++|++.||++++| +++.+.++..||++
T Consensus 78 ----------------~--~~~k~k~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~-~~~~~~~~~~ad~v 138 (180)
T 1k1e_A 78 ----------------F--LGKLEKETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAV-ADAPIYVKNAVDHV 138 (180)
T ss_dssp ----------------E--ESCSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTSCHHHHTTSSEE
T ss_pred ----------------e--cCCCCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEe-CCccHHHHhhCCEE
Confidence 0 0125688888877765 457899999999999999999999999 55666688999999
Q ss_pred cccccchHHH-----HhhhhhhHHHHHHHHHHHHH
Q 041225 529 MGQFRFLKRL-----LLVHGHWNYQRIGYLVLYNF 558 (658)
Q Consensus 529 l~~~~~l~~l-----~l~~gr~~~~~~~~~i~~~~ 558 (658)
+.+.+....+ .+...|..+.++...+.|.+
T Consensus 139 ~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~~~~~~ 173 (180)
T 1k1e_A 139 LSTHGGKGAFREMSDMILQAQGKSSVFDTAQGFLK 173 (180)
T ss_dssp CSSCTTTTHHHHHHHHHHHHTTCTHHHHCHHHHHH
T ss_pred ecCCCCCcHHHHHHHHHHHhcCchhhhhhccchhh
Confidence 9876432222 11234445666655555543
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=99.48 E-value=2.3e-13 Score=137.36 Aligned_cols=198 Identities=13% Similarity=0.086 Sum_probs=127.6
Q ss_pred HHhhhccceeeeccccccccCCChHHHHH--------HHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEE-----
Q 041225 300 AALIECDLTLLGATGIEDKLQDGVPEAIE--------ALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQII----- 366 (658)
Q Consensus 300 ~~~~d~DgTllg~~~~~d~l~~~~~~aI~--------~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~----- 366 (658)
.+++|+||||++. .+.+.+..++. .+++.|++++++|||+...+..+...+|+......++.
T Consensus 24 liifDlDGTLlds-----~i~~~~~~~l~~~~~~l~~~~~~~g~~~~~~tGr~~~~~~~~~~~~g~~~~~~~~i~~~g~~ 98 (289)
T 3gyg_A 24 IVFCDFDETYFPH-----TIDEQKQQDIYELEDYLEQKSKDGELIIGWVTGSSIESILDKMGRGKFRYFPHFIASDLGTE 98 (289)
T ss_dssp EEEEETBTTTBCS-----SCCHHHHHHHHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHTTCCBCCSEEEETTTTE
T ss_pred EEEEECCCCCcCC-----CCCcchHHHHHHHHHHHHHHHhcCCcEEEEEcCCCHHHHHHHHHhhccCCCCCeEeecCCce
Confidence 4679999999996 27888888888 66789999999999999999999999887433222221
Q ss_pred --E---cC---------------CCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCch
Q 041225 367 --I---NG---------------NSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDV 426 (658)
Q Consensus 367 --~---~g---------------~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (658)
. +| .+.+.+.++++.+++.++...........
T Consensus 99 i~~~~~ng~~~~~~~~~~~~~~~~~~~~v~e~l~~l~~~~g~~l~~~t~~~~---------------------------- 150 (289)
T 3gyg_A 99 ITYFSEHNFGQQDNKWNSRINEGFSKEKVEKLVKQLHENHNILLNPQTQLGK---------------------------- 150 (289)
T ss_dssp EEECCSSSTTEECHHHHHHHHTTCCHHHHHHHHHHHHHHSSCCCEEGGGTCG----------------------------
T ss_pred EEEEcCCCcEeecCchhhhhcccCCHHHHHHHHHHHHhhhCceeeecccccc----------------------------
Confidence 1 22 23455666666665543221111000000
Q ss_pred hhhhccCcEEEEEeCcc------HHHHHHHhhHHhhhh--hhcc--------CCeeEEEEcCcccHHHHHHHHHhc---C
Q 041225 427 KEVAAIASLALIIDGNS------LVYILEKDLESDLFD--LATS--------CRVVLCCRVAPLQKAGIVDLIKSR---T 487 (658)
Q Consensus 427 ~~~~~~~~~~l~~~~~~------~~~~~~~~~~~~~~~--i~~s--------~~~~i~~~~~~~~K~~~v~~L~~~---~ 487 (658)
............. ....+...+...... +..+ ....+++.+.+.+|+.+++.+++. +
T Consensus 151 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~ 226 (289)
T 3gyg_A 151 ----SRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVSVNINRCNPLAGDPEDSYDVDFIPIGTGKNEIVTFMLEKYNLN 226 (289)
T ss_dssp ----GGTTCCEEEECCCHHHHHHHHHHHHHHHHHHTEEEEEEECCGGGTCCTTEEEEEEEESCCSHHHHHHHHHHHHTCC
T ss_pred ----cceEEEEEEeccccccchHHHHHHHHHHHHcCCCEEEEEccccccCCCCceEEEEEeCCCCHHHHHHHHHHHcCCC
Confidence 0000001111110 111112222221111 1112 125688889999999999999987 5
Q ss_pred CCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhcccccccccch
Q 041225 488 DDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFL 535 (658)
Q Consensus 488 ~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l 535 (658)
++++++|||+.||++|++.||+||+| +++...++..||+++.+...-
T Consensus 227 ~~~~~~~GDs~~D~~~~~~ag~~~~~-~~~~~~~~~~a~~v~~~~~~~ 273 (289)
T 3gyg_A 227 TERAIAFGDSGNDVRMLQTVGNGYLL-KNATQEAKNLHNLITDSEYSK 273 (289)
T ss_dssp GGGEEEEECSGGGHHHHTTSSEEEEC-TTCCHHHHHHCCCBCSSCHHH
T ss_pred hhhEEEEcCCHHHHHHHHhCCcEEEE-CCccHHHHHhCCEEcCCCCcC
Confidence 67899999999999999999999999 667777899999998776543
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.45 E-value=4.2e-14 Score=133.04 Aligned_cols=152 Identities=13% Similarity=0.070 Sum_probs=110.3
Q ss_pred HHHhhhccceeeeccccccccCC-------ChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCC
Q 041225 299 TAALIECDLTLLGATGIEDKLQD-------GVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNS 371 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~d~l~~-------~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~ 371 (658)
..+++|+||||+.....-..... ....+|+.|+++|++++++||++...+..+++.+|+...
T Consensus 20 k~vifD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~~~----------- 88 (189)
T 3mn1_A 20 KLAVFDVDGVLTDGRLYFMEDGSEIKTFNTLDGQGIKMLIASGVTTAIISGRKTAIVERRAKSLGIEHL----------- 88 (189)
T ss_dssp CEEEECSTTTTSCSEEEEETTSCEEEEEEHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCSEE-----------
T ss_pred CEEEEcCCCCcCCccEeeccCCcEeeeeccccHHHHHHHHHCCCEEEEEECcChHHHHHHHHHcCCHHH-----------
Confidence 45788999999985321111100 111389999999999999999999999999999987321
Q ss_pred HHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHh
Q 041225 372 EEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKD 451 (658)
Q Consensus 372 ~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 451 (658)
T Consensus 89 -------------------------------------------------------------------------------- 88 (189)
T 3mn1_A 89 -------------------------------------------------------------------------------- 88 (189)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhcccc
Q 041225 452 LESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFA 528 (658)
Q Consensus 452 ~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~v 528 (658)
.....+|..+++.+++. +++++++|||+.||++|++.||+++++ +++...++..||++
T Consensus 89 ------------------f~~~~~K~~~~~~~~~~~g~~~~~~~~vGD~~nDi~~~~~ag~~~~~-~~~~~~~~~~ad~v 149 (189)
T 3mn1_A 89 ------------------FQGREDKLVVLDKLLAELQLGYEQVAYLGDDLPDLPVIRRVGLGMAV-ANAASFVREHAHGI 149 (189)
T ss_dssp ------------------ECSCSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTSCHHHHHTSSEE
T ss_pred ------------------hcCcCChHHHHHHHHHHcCCChhHEEEECCCHHHHHHHHHCCCeEEe-CCccHHHHHhCCEE
Confidence 00115788888888776 568899999999999999999999999 55666789999999
Q ss_pred cccccc------hHHHHhhhhhhHHHHHHHHHHHHHHHH
Q 041225 529 MGQFRF------LKRLLLVHGHWNYQRIGYLVLYNFYRN 561 (658)
Q Consensus 529 l~~~~~------l~~l~l~~gr~~~~~~~~~i~~~~~~~ 561 (658)
+.+.+. +..+ +...|..+.++.+.+.|.+..|
T Consensus 150 ~~~~~~~G~~~~l~~~-l~~~~~~~~~~~~~~~~~~~~~ 187 (189)
T 3mn1_A 150 TRAQGGEGAAREFCEL-ILSAQGNLEAAHSVYLEGHHHH 187 (189)
T ss_dssp CSSCTTTTHHHHHHHH-HHHHTTCHHHHHHTTSTTC---
T ss_pred ecCCCCCcHHHHHHHH-HHHccCcHHHHHHHHhcccccc
Confidence 887532 2222 2356777778777766655443
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.45 E-value=9.4e-14 Score=127.13 Aligned_cols=60 Identities=12% Similarity=0.022 Sum_probs=52.4
Q ss_pred cccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhccccccccc
Q 041225 473 PLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFR 533 (658)
Q Consensus 473 ~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~ 533 (658)
+.+|..+++.++++ +++++++|||+.||++|++.||++++| +++.+.+++.||+++.+..
T Consensus 81 ~~~K~~~l~~~~~~~gi~~~~~~~vGD~~nDi~~~~~ag~~~a~-~na~~~~k~~Ad~v~~~~~ 143 (168)
T 3ewi_A 81 VSDKLATVDEWRKEMGLCWKEVAYLGNEVSDEECLKRVGLSAVP-ADACSGAQKAVGYICKCSG 143 (168)
T ss_dssp CSCHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHHHSSEEEEC-TTCCHHHHTTCSEECSSCT
T ss_pred CCChHHHHHHHHHHcCcChHHEEEEeCCHhHHHHHHHCCCEEEe-CChhHHHHHhCCEEeCCCC
Confidence 35799999988876 568999999999999999999999999 6677789999999987653
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.44 E-value=7.9e-14 Score=131.36 Aligned_cols=125 Identities=13% Similarity=0.067 Sum_probs=98.1
Q ss_pred HHHhhhccceeeeccccccccCCC-------hHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCC
Q 041225 299 TAALIECDLTLLGATGIEDKLQDG-------VPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNS 371 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~d~l~~~-------~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~ 371 (658)
..+++|+||||++.....+...++ ...+|+.|+++|++++|+||++...+..+++.+|+...
T Consensus 26 k~vifD~DGtL~d~~~~~~~~~~~~~~~~~~d~~~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~~----------- 94 (195)
T 3n07_A 26 KLLICDVDGVFSDGLIYMGNQGEELKTFHTRDGYGVKALMNAGIEIAIITGRRSQIVENRMKALGISLI----------- 94 (195)
T ss_dssp CEEEECSTTTTSCSCCEECTTSCEECCCCTTHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCEE-----------
T ss_pred CEEEEcCCCCcCCCcEEEccCchhhheeecccHHHHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcEE-----------
Confidence 456789999999832222222233 34459999999999999999999999999999987310
Q ss_pred HHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHh
Q 041225 372 EEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKD 451 (658)
Q Consensus 372 ~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 451 (658)
T Consensus 95 -------------------------------------------------------------------------------- 94 (195)
T 3n07_A 95 -------------------------------------------------------------------------------- 94 (195)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhcccc
Q 041225 452 LESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFA 528 (658)
Q Consensus 452 ~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~v 528 (658)
......|..+++.+++. +++++++|||+.||++|++.||++++| +++.+.++..||++
T Consensus 95 ------------------~~~~k~k~~~~~~~~~~~~~~~~~~~~vGD~~nDi~~~~~ag~~va~-~na~~~~~~~ad~v 155 (195)
T 3n07_A 95 ------------------YQGQDDKVQAYYDICQKLAIAPEQTGYIGDDLIDWPVMEKVALRVCV-ADGHPLLAQRANYV 155 (195)
T ss_dssp ------------------ECSCSSHHHHHHHHHHHHCCCGGGEEEEESSGGGHHHHTTSSEEEEC-TTSCHHHHHHCSEE
T ss_pred ------------------eeCCCCcHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHCCCEEEE-CChHHHHHHhCCEE
Confidence 01125788888888876 568999999999999999999999999 56667799999999
Q ss_pred ccccc
Q 041225 529 MGQFR 533 (658)
Q Consensus 529 l~~~~ 533 (658)
+.+..
T Consensus 156 ~~~~~ 160 (195)
T 3n07_A 156 THIKG 160 (195)
T ss_dssp CSSCT
T ss_pred EcCCC
Confidence 87653
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.39 E-value=2.2e-13 Score=126.50 Aligned_cols=124 Identities=15% Similarity=0.116 Sum_probs=95.1
Q ss_pred HHHhhhccceeeeccccccccCCChH-------HHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCC
Q 041225 299 TAALIECDLTLLGATGIEDKLQDGVP-------EAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNS 371 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~d~l~~~~~-------~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~ 371 (658)
..+++|+||||+.....-....+... .+|+.|+++|++++++||++...+..+++.+|+.
T Consensus 13 k~vifD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~------------- 79 (176)
T 3mmz_A 13 DAVVLDFDGTQTDDRVLIDSDGREFVSVHRGDGLGIAALRKSGLTMLILSTEQNPVVAARARKLKIP------------- 79 (176)
T ss_dssp SEEEECCTTTTSCSCCEECTTCCEEEEEEHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC-------------
T ss_pred CEEEEeCCCCcCcCCEeecCCccHhHhcccccHHHHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe-------------
Confidence 34679999999983221111111111 2499999999999999999999999999998872
Q ss_pred HHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHh
Q 041225 372 EEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKD 451 (658)
Q Consensus 372 ~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 451 (658)
T Consensus 80 -------------------------------------------------------------------------------- 79 (176)
T 3mmz_A 80 -------------------------------------------------------------------------------- 79 (176)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhcccc
Q 041225 452 LESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFA 528 (658)
Q Consensus 452 ~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~v 528 (658)
+......|..+++.+++. +++++++|||+.||++|++.||++++| +++.+.++..||++
T Consensus 80 -----------------~~~~~~~k~~~l~~~~~~~~~~~~~~~~vGD~~nD~~~~~~ag~~v~~-~~~~~~~~~~ad~v 141 (176)
T 3mmz_A 80 -----------------VLHGIDRKDLALKQWCEEQGIAPERVLYVGNDVNDLPCFALVGWPVAV-ASAHDVVRGAARAV 141 (176)
T ss_dssp -----------------EEESCSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTCCHHHHHHSSEE
T ss_pred -----------------eEeCCCChHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCeEEC-CChhHHHHHhCCEE
Confidence 001125788888888876 467899999999999999999999999 55666789999999
Q ss_pred ccccc
Q 041225 529 MGQFR 533 (658)
Q Consensus 529 l~~~~ 533 (658)
+.+.+
T Consensus 142 ~~~~~ 146 (176)
T 3mmz_A 142 TTVPG 146 (176)
T ss_dssp CSSCT
T ss_pred ecCCC
Confidence 98743
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.31 E-value=2.4e-12 Score=121.08 Aligned_cols=125 Identities=18% Similarity=0.184 Sum_probs=95.9
Q ss_pred HHHhhhccceeeeccccccccCCChHHH-------HHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCC
Q 041225 299 TAALIECDLTLLGATGIEDKLQDGVPEA-------IEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNS 371 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~d~l~~~~~~a-------I~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~ 371 (658)
..+++|.||||.......++..+...+. |+.|+++|++++++||++...+..+++.+|+...
T Consensus 20 k~vifD~DGtL~~~~~~~~~~~~~~~~~~~~d~~~l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~~----------- 88 (191)
T 3n1u_A 20 KCLICDVDGVLSDGLLHIDNHGNELKSFHVQDGMGLKLLMAAGIQVAIITTAQNAVVDHRMEQLGITHY----------- 88 (191)
T ss_dssp SEEEECSTTTTBCSCCEECTTCCEECCBCHHHHHHHHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCEE-----------
T ss_pred CEEEEeCCCCCCCCceeecCCchhhhhccccChHHHHHHHHCCCeEEEEeCcChHHHHHHHHHcCCccc-----------
Confidence 4568899999988332222333444455 9999999999999999999999999999887321
Q ss_pred HHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHh
Q 041225 372 EEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKD 451 (658)
Q Consensus 372 ~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 451 (658)
T Consensus 89 -------------------------------------------------------------------------------- 88 (191)
T 3n1u_A 89 -------------------------------------------------------------------------------- 88 (191)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhcccc
Q 041225 452 LESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFA 528 (658)
Q Consensus 452 ~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~v 528 (658)
+. ....|..+++.+.+. +++++++|||+.||++|++.||++++| +++.+.++..||++
T Consensus 89 ----------------~~--~~kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~-~~~~~~~~~~ad~v 149 (191)
T 3n1u_A 89 ----------------YK--GQVDKRSAYQHLKKTLGLNDDEFAYIGDDLPDLPLIQQVGLGVAV-SNAVPQVLEFADWR 149 (191)
T ss_dssp ----------------EC--SCSSCHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTCCHHHHHHSSEE
T ss_pred ----------------ee--CCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCEEEe-CCccHHHHHhCCEE
Confidence 00 003466666666654 567899999999999999999999999 55666789999999
Q ss_pred ccccc
Q 041225 529 MGQFR 533 (658)
Q Consensus 529 l~~~~ 533 (658)
+.+..
T Consensus 150 ~~~~~ 154 (191)
T 3n1u_A 150 TERTG 154 (191)
T ss_dssp CSSCT
T ss_pred ecCCC
Confidence 98754
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=99.29 E-value=3.6e-12 Score=121.53 Aligned_cols=124 Identities=11% Similarity=0.051 Sum_probs=94.7
Q ss_pred HHhhhccceeeeccccccc-------cCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCH
Q 041225 300 AALIECDLTLLGATGIEDK-------LQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSE 372 (658)
Q Consensus 300 ~~~~d~DgTllg~~~~~d~-------l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~ 372 (658)
.+.+|+||||++....-.. .......+|+.|+++|+++.++||++...+..+++.+|+...
T Consensus 51 ~viFDlDGTL~Ds~~~~~~~~~~~~~~~~~d~~~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~~~------------ 118 (211)
T 3ij5_A 51 LLICDVDGVMSDGLIYMGNQGEELKAFNVRDGYGIRCLITSDIDVAIITGRRAKLLEDRANTLGITHL------------ 118 (211)
T ss_dssp EEEECCTTTTSSSEEEEETTSCEEEEEEHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCCEE------------
T ss_pred EEEEeCCCCEECCHHHHhhhhHHHHHhccchHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCchh------------
Confidence 4678999998864321100 000111279999999999999999999999999999987311
Q ss_pred HHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhh
Q 041225 373 EECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDL 452 (658)
Q Consensus 373 ~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 452 (658)
T Consensus 119 -------------------------------------------------------------------------------- 118 (211)
T 3ij5_A 119 -------------------------------------------------------------------------------- 118 (211)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhccccc
Q 041225 453 ESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAM 529 (658)
Q Consensus 453 ~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl 529 (658)
+. ....|..+++.+++. +++++++|||+.||++|++.||++++| +++.+.++..||+++
T Consensus 119 ---------------f~--~~k~K~~~l~~~~~~lg~~~~~~~~vGDs~nDi~~~~~ag~~~a~-~~~~~~~~~~Ad~v~ 180 (211)
T 3ij5_A 119 ---------------YQ--GQSDKLVAYHELLATLQCQPEQVAYIGDDLIDWPVMAQVGLSVAV-ADAHPLLLPKAHYVT 180 (211)
T ss_dssp ---------------EC--SCSSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEEC-TTSCTTTGGGSSEEC
T ss_pred ---------------hc--ccCChHHHHHHHHHHcCcCcceEEEEcCCHHHHHHHHHCCCEEEe-CCccHHHHhhCCEEE
Confidence 00 015788888888776 578999999999999999999999999 556667899999998
Q ss_pred cccc
Q 041225 530 GQFR 533 (658)
Q Consensus 530 ~~~~ 533 (658)
.+..
T Consensus 181 ~~~~ 184 (211)
T 3ij5_A 181 RIKG 184 (211)
T ss_dssp SSCT
T ss_pred eCCC
Confidence 7663
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=99.28 E-value=2.6e-12 Score=117.75 Aligned_cols=124 Identities=16% Similarity=0.066 Sum_probs=94.7
Q ss_pred HHhhhccceeeeccccccccC-------CChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCH
Q 041225 300 AALIECDLTLLGATGIEDKLQ-------DGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSE 372 (658)
Q Consensus 300 ~~~~d~DgTllg~~~~~d~l~-------~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~ 372 (658)
.+++|.||||+.....-.... .....+++.|+++|++++++||++...+..+++.+|+...
T Consensus 6 ~vifD~DGTL~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~------------ 73 (164)
T 3e8m_A 6 LILTDIDGVWTDGGMFYDQTGNEWKKFNTSDSAGIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDYL------------ 73 (164)
T ss_dssp EEEECSTTTTSSSEEEECSSSCEEEEEEGGGHHHHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSEE------------
T ss_pred EEEEcCCCceEcCcEEEcCCCcEEEEecCChHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCEe------------
Confidence 357899999998421111111 1233459999999999999999999999999999887321
Q ss_pred HHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhh
Q 041225 373 EECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDL 452 (658)
Q Consensus 373 ~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 452 (658)
T Consensus 74 -------------------------------------------------------------------------------- 73 (164)
T 3e8m_A 74 -------------------------------------------------------------------------------- 73 (164)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhccccc
Q 041225 453 ESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAM 529 (658)
Q Consensus 453 ~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl 529 (658)
......|..+++.+.+. +++++++|||+.||++|++.||+++++ +++.+.+++.||+++
T Consensus 74 -----------------~~~~kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~-~~~~~~~~~~ad~v~ 135 (164)
T 3e8m_A 74 -----------------FQGVVDKLSAAEELCNELGINLEQVAYIGDDLNDAKLLKRVGIAGVP-ASAPFYIRRLSTIFL 135 (164)
T ss_dssp -----------------ECSCSCHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHTTSSEEECC-TTSCHHHHTTCSSCC
T ss_pred -----------------ecccCChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEc-CChHHHHHHhCcEEe
Confidence 00124677777777765 567899999999999999999999999 556667899999999
Q ss_pred cccc
Q 041225 530 GQFR 533 (658)
Q Consensus 530 ~~~~ 533 (658)
.+.+
T Consensus 136 ~~~~ 139 (164)
T 3e8m_A 136 EKRG 139 (164)
T ss_dssp CCCT
T ss_pred ccCC
Confidence 8755
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=99.21 E-value=1.5e-11 Score=115.33 Aligned_cols=124 Identities=11% Similarity=0.092 Sum_probs=92.5
Q ss_pred HHHhhhccceeeeccc-ccc------ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCC
Q 041225 299 TAALIECDLTLLGATG-IED------KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNS 371 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~-~~d------~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~ 371 (658)
..+++|.||||+.... +.. .+......+|++|+++|++++++||++...+..+++.+|+...
T Consensus 27 k~vifD~DGTL~~~~~~~~~~~~~~~~~~~~d~~~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~~----------- 95 (188)
T 2r8e_A 27 RLLILDVDGVLSDGLIYMGNNGEELKAFNVRDGYGIRCALTSDIEVAIITGRKAKLVEDRCATLGITHL----------- 95 (188)
T ss_dssp SEEEECCCCCCBCSEEEEETTSCEEEEEEHHHHHHHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCEE-----------
T ss_pred CEEEEeCCCCcCCCCEEecCCCcEEEEeecccHHHHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCcee-----------
Confidence 3467899999996311 000 1111123479999999999999999999999999988886210
Q ss_pred HHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHh
Q 041225 372 EEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKD 451 (658)
Q Consensus 372 ~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 451 (658)
T Consensus 96 -------------------------------------------------------------------------------- 95 (188)
T 2r8e_A 96 -------------------------------------------------------------------------------- 95 (188)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhcccc
Q 041225 452 LESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFA 528 (658)
Q Consensus 452 ~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~v 528 (658)
...+..|..+++.+.+. +++++++|||+.||++|++.||+++++ +++...++..||++
T Consensus 96 ------------------~~~~kpk~~~~~~~~~~~g~~~~~~~~iGD~~~Di~~a~~ag~~~~~-~~~~~~~~~~ad~v 156 (188)
T 2r8e_A 96 ------------------YQGQSNKLIAFSDLLEKLAIAPENVAYVGDDLIDWPVMEKVGLSVAV-ADAHPLLIPRADYV 156 (188)
T ss_dssp ------------------ECSCSCSHHHHHHHHHHHTCCGGGEEEEESSGGGHHHHTTSSEEEEC-TTSCTTTGGGSSEE
T ss_pred ------------------ecCCCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCEEEe-cCcCHHHHhcCCEE
Confidence 01134567777777665 457899999999999999999999999 44555678889999
Q ss_pred cccc
Q 041225 529 MGQF 532 (658)
Q Consensus 529 l~~~ 532 (658)
+.+.
T Consensus 157 ~~~~ 160 (188)
T 2r8e_A 157 TRIA 160 (188)
T ss_dssp CSSC
T ss_pred EeCC
Confidence 9887
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.19 E-value=1.1e-11 Score=113.22 Aligned_cols=127 Identities=15% Similarity=0.126 Sum_probs=95.1
Q ss_pred HHHHhhhccceeeecccc-------ccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCC
Q 041225 298 QTAALIECDLTLLGATGI-------EDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGN 370 (658)
Q Consensus 298 ~~~~~~d~DgTllg~~~~-------~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~ 370 (658)
...+++|+||||+..... -..+++++.++|+.|+++|++++++||++...+..+.+.+|+...
T Consensus 9 ~k~v~~DlDGTL~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~---------- 78 (162)
T 2p9j_A 9 LKLLIMDIDGVLTDGKLYYTEHGETIKVFNVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEEI---------- 78 (162)
T ss_dssp CCEEEECCTTTTSCSEEEEETTEEEEEEEEHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCEE----------
T ss_pred eeEEEEecCcceECCceeecCCCceeeeecccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHhh----------
Confidence 356789999999963211 112355678999999999999999999999999999998886210
Q ss_pred CHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHH
Q 041225 371 SEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEK 450 (658)
Q Consensus 371 ~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 450 (658)
T Consensus 79 -------------------------------------------------------------------------------- 78 (162)
T 2p9j_A 79 -------------------------------------------------------------------------------- 78 (162)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhccc
Q 041225 451 DLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDF 527 (658)
Q Consensus 451 ~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~ 527 (658)
+. .+..|..+++.+.+. +++++++|||+.||++|.+.||+++++ .++....+..||+
T Consensus 79 ----------------~~---~~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~ag~~~~~-~~~~~~~~~~a~~ 138 (162)
T 2p9j_A 79 ----------------YT---GSYKKLEIYEKIKEKYSLKDEEIGFIGDDVVDIEVMKKVGFPVAV-RNAVEEVRKVAVY 138 (162)
T ss_dssp ----------------EE---CC--CHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTSCHHHHHHCSE
T ss_pred ----------------cc---CCCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEe-cCccHHHHhhCCE
Confidence 00 023355555555443 567899999999999999999999998 4445567888999
Q ss_pred ccccccc
Q 041225 528 AMGQFRF 534 (658)
Q Consensus 528 vl~~~~~ 534 (658)
++.+...
T Consensus 139 v~~~~~~ 145 (162)
T 2p9j_A 139 ITQRNGG 145 (162)
T ss_dssp ECSSCSS
T ss_pred EecCCCC
Confidence 9987765
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.19 E-value=4.2e-12 Score=126.41 Aligned_cols=67 Identities=15% Similarity=0.178 Sum_probs=54.2
Q ss_pred HHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEec---CChhHHHHHHHHcCccCCCccEEEEcC
Q 041225 299 TAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTG---DKQDTAISIALSCKLLTPDMQQIIING 369 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TG---r~~~~a~~ia~~~gl~~~~~~~i~~~g 369 (658)
+.+++|+||||++. +.+.++++++|++++++|++++++|| |+...+......+|+....+.++..++
T Consensus 7 kli~~DlDGTLl~~----~~~~~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~~~~~~ii~~~~ 76 (266)
T 3pdw_A 7 KGYLIDLDGTMYNG----TEKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIPATEEQVFTTSM 76 (266)
T ss_dssp SEEEEECSSSTTCH----HHHHHHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCCCCGGGEEEHHH
T ss_pred CEEEEeCcCceEeC----CEeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCHHHccCHHH
Confidence 45789999999985 45667899999999999999999988 777777888889998665555665444
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.11 E-value=7.7e-11 Score=117.33 Aligned_cols=68 Identities=12% Similarity=0.086 Sum_probs=55.9
Q ss_pred HHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEec---CChhHHHHHHHHcCccCCCccEEEEcCC
Q 041225 299 TAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTG---DKQDTAISIALSCKLLTPDMQQIIINGN 370 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TG---r~~~~a~~ia~~~gl~~~~~~~i~~~g~ 370 (658)
+.+++|+||||++. +.+.++++++|++++++|++++++|| |+..........+|+....+.++..++.
T Consensus 9 kli~~DlDGTLl~~----~~~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~~~~~~ii~~~~~ 79 (268)
T 3qgm_A 9 KGYIIDIDGVIGKS----VTPIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLEVGEDEILVATYA 79 (268)
T ss_dssp SEEEEECBTTTEET----TEECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHTTCCCCGGGEEEHHHH
T ss_pred CEEEEcCcCcEECC----CEeCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHCCCCCCHHHeeCHHHH
Confidence 46789999999984 34667899999999999999999999 6777777888888987666667766554
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=99.05 E-value=4.9e-10 Score=106.62 Aligned_cols=58 Identities=28% Similarity=0.418 Sum_probs=49.3
Q ss_pred CcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhccccccc
Q 041225 472 APLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQ 531 (658)
Q Consensus 472 ~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~ 531 (658)
.+.+|+.++..+.++ +++++++|||+.||++|++.||++++|. +.+.++..||+++.+
T Consensus 140 ~~~~K~~~l~~~~~~lgi~~~~~~~iGD~~~Di~~~~~ag~~~~~~--~~~~~~~~a~~v~~~ 200 (211)
T 1l7m_A 140 KENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAFC--AKPILKEKADICIEK 200 (211)
T ss_dssp STTHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEEES--CCHHHHTTCSEEECS
T ss_pred CCccHHHHHHHHHHHcCCCHHHEEEEecChhHHHHHHHCCCEEEEC--CCHHHHhhcceeecc
Confidence 357899998888876 5678999999999999999999999994 334578889999877
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=99.03 E-value=1.1e-10 Score=116.24 Aligned_cols=68 Identities=16% Similarity=0.138 Sum_probs=57.5
Q ss_pred HHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEe---cCChhHHHHHHHHcCccCCCccEEEEcCCC
Q 041225 300 AALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLT---GDKQDTAISIALSCKLLTPDMQQIIINGNS 371 (658)
Q Consensus 300 ~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~T---Gr~~~~a~~ia~~~gl~~~~~~~i~~~g~~ 371 (658)
.+++|+||||++. +++.+++.++|++++++|++++++| ||+...+....+.+|+....++++..++..
T Consensus 19 ~v~~DlDGTLl~~----~~~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~~~~~~ii~~~~~~ 89 (271)
T 1vjr_A 19 LFILDMDGTFYLD----DSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVDVPDDAVVTSGEIT 89 (271)
T ss_dssp EEEECCBTTTEET----TEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCCCCGGGEEEHHHHH
T ss_pred EEEEcCcCcEEeC----CEECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCCCChhhEEcHHHHH
Confidence 4679999999985 4688999999999999999999999 999999988889999865556677655543
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=99.03 E-value=5.8e-11 Score=116.28 Aligned_cols=67 Identities=10% Similarity=0.042 Sum_probs=51.4
Q ss_pred EEEcCcccHHHHHHHHHhc---CCCeEEEEcCC-cCChhhhhhcceeEEe--cCccc-hhhh---hhcccccccccc
Q 041225 468 CCRVAPLQKAGIVDLIKSR---TDDMTLAIGDG-ANDVSMIQMADVGVGI--CGQEG-RQAV---MASDFAMGQFRF 534 (658)
Q Consensus 468 ~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg-~NDi~Ml~~A~vgIam--~~~~~-~~~k---~~AD~vl~~~~~ 534 (658)
+....+..|+.+++.++++ +++++++|||+ .||++|++.||+++++ .|+.. .+++ ..+|+++.+..-
T Consensus 170 ~~~~~~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~~~v~~~~~e 246 (250)
T 2c4n_A 170 KPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYPSVAE 246 (250)
T ss_dssp CCEECSTTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEESSGGG
T ss_pred CceEeCCCCHHHHHHHHHHcCCCcceEEEECCCchhHHHHHHHcCCeEEEECCCCCChhhhhhcCCCCCEEECCHHH
Confidence 4456788899999999887 67899999999 7999999999999654 23332 3343 468888877654
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.01 E-value=3.8e-10 Score=116.23 Aligned_cols=150 Identities=21% Similarity=0.211 Sum_probs=98.4
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCcccccc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCN 397 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~ 397 (658)
++.|++.++++.|+++|++++++||.....+..+++.+|+...-...+..
T Consensus 178 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~------------------------------ 227 (335)
T 3n28_A 178 PLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTLEI------------------------------ 227 (335)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEE------------------------------
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeEEeeeeEe------------------------------
Confidence 68899999999999999999999999999999999999874211000000
Q ss_pred ccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHH
Q 041225 398 SKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKA 477 (658)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~ 477 (658)
.++ .. ...+.+....+..|.
T Consensus 228 -----------------------------------------~d~-~~------------------tg~~~~~~~~~kpk~ 247 (335)
T 3n28_A 228 -----------------------------------------VSG-KL------------------TGQVLGEVVSAQTKA 247 (335)
T ss_dssp -----------------------------------------ETT-EE------------------EEEEESCCCCHHHHH
T ss_pred -----------------------------------------eCC-ee------------------eeeecccccChhhhH
Confidence 000 00 000011122345788
Q ss_pred HHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhcccccccccchHHHHhhh-hhhHHHHHHHH
Q 041225 478 GIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLVH-GHWNYQRIGYL 553 (658)
Q Consensus 478 ~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~~-gr~~~~~~~~~ 553 (658)
.+++.+.+. +++++++||||.||++|++.||+||+| ++.+.+++.||+++...++...+.++. ....-.|++..
T Consensus 248 ~~~~~~~~~lgi~~~~~v~vGDs~nDi~~a~~aG~~va~--~~~~~~~~~a~~v~~~~~l~~v~~~L~~~l~~~~r~~~~ 325 (335)
T 3n28_A 248 DILLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAY--HAKPKVEAKAQTAVRFAGLGGVVCILSAALVAQQKLSWK 325 (335)
T ss_dssp HHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE--SCCHHHHTTSSEEESSSCTHHHHHHHHHHHHHTTCCCCC
T ss_pred HHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEe--CCCHHHHhhCCEEEecCCHHHHHHHHHhHHHHhhhhccc
Confidence 888888776 568899999999999999999999999 444568999999986666554443332 22222244444
Q ss_pred HHHHHH
Q 041225 554 VLYNFY 559 (658)
Q Consensus 554 i~~~~~ 559 (658)
+.+.+.
T Consensus 326 ~~~~~~ 331 (335)
T 3n28_A 326 SKEGHH 331 (335)
T ss_dssp ------
T ss_pred cccccc
Confidence 444433
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.00 E-value=1e-09 Score=105.07 Aligned_cols=135 Identities=19% Similarity=0.252 Sum_probs=97.0
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCcccccc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCN 397 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~ 397 (658)
++.|++.+.++.|+++|++++++|+.....+..+.+.+|+...-+.++..
T Consensus 75 ~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~~~~~------------------------------ 124 (217)
T 3m1y_A 75 PLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAFSNTLIV------------------------------ 124 (217)
T ss_dssp CBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEE------------------------------
T ss_pred cCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchhccceeEE------------------------------
Confidence 68899999999999999999999999998888888888874321111000
Q ss_pred ccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHH
Q 041225 398 SKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKA 477 (658)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~ 477 (658)
.... . ..........+..|.
T Consensus 125 ------------------------------------------~~~~-------------~-----~~~~~~~~~~~k~k~ 144 (217)
T 3m1y_A 125 ------------------------------------------ENDA-------------L-----NGLVTGHMMFSHSKG 144 (217)
T ss_dssp ------------------------------------------ETTE-------------E-----EEEEEESCCSTTHHH
T ss_pred ------------------------------------------eCCE-------------E-----EeeeccCCCCCCChH
Confidence 0000 0 000111223567889
Q ss_pred HHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhcccccccccchHHHHhhhhh
Q 041225 478 GIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLVHGH 544 (658)
Q Consensus 478 ~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~~gr 544 (658)
.+++.+++. +++++++|||+.||++|++.||++++| ++.+.+++.||+++.+.++...+-+++|+
T Consensus 145 ~~~~~~~~~~g~~~~~~i~vGDs~~Di~~a~~aG~~~~~--~~~~~l~~~ad~v~~~~dl~~~~~~~~~~ 212 (217)
T 3m1y_A 145 EMLLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIKIAF--NAKEVLKQHATHCINEPDLALIKPLIEGH 212 (217)
T ss_dssp HHHHHHHHHHTCCSTTEEEEECSGGGHHHHTTCSEEEEE--SCCHHHHTTCSEEECSSBGGGGTTC----
T ss_pred HHHHHHHHHcCCCHhHEEEEeCCHHHHHHHHHCCCeEEE--CccHHHHHhcceeecccCHHHHHHHhccc
Confidence 998888876 568899999999999999999999999 34456899999999988776665555444
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.00 E-value=2.2e-10 Score=113.83 Aligned_cols=67 Identities=13% Similarity=0.131 Sum_probs=53.0
Q ss_pred HHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEe---cCChhHHHHHHHHcCccCCCccEE
Q 041225 299 TAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLT---GDKQDTAISIALSCKLLTPDMQQI 365 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~T---Gr~~~~a~~ia~~~gl~~~~~~~i 365 (658)
..+++|+||||++...-.+.+.+.+.++++.++++|++++++| ||+...+......+|+..+...++
T Consensus 13 k~i~fDlDGTLl~s~~~~~~~~~~~~~a~~~l~~~G~~~~~~t~~~gr~~~~~~~~l~~~g~~~~~~~~~ 82 (271)
T 2x4d_A 13 RGVLLDISGVLYDSGAGGGTAIAGSVEAVARLKRSRLKVRFCTNESAASRAELVGQLQRLGFDISEQEVT 82 (271)
T ss_dssp CEEEECCBTTTEECCTTTCEECTTHHHHHHHHHHSSSEEEEECCCCSSCHHHHHHHHHHTTCCCCGGGEE
T ss_pred CEEEEeCCCeEEecCCCCCccCcCHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHHCCCCCCHHHee
Confidence 4578999999999621123477899999999999999999999 999999988888888754433333
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=98.96 E-value=2.7e-10 Score=113.05 Aligned_cols=68 Identities=18% Similarity=0.189 Sum_probs=57.3
Q ss_pred HHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEe---cCChhHHHHHHHHcCccCCCccEEEEcCC
Q 041225 299 TAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLT---GDKQDTAISIALSCKLLTPDMQQIIINGN 370 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~T---Gr~~~~a~~ia~~~gl~~~~~~~i~~~g~ 370 (658)
+.+++|+||||++. +..+ ++++++|++++++|++++++| ||+...+......+|+....+.++..++.
T Consensus 6 kli~~DlDGTLl~~---~~~i-~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~~~~~~ii~~~~~ 76 (264)
T 3epr_A 6 KGYLIDLDGTIYKG---KSRI-PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVETPLETIYTATMA 76 (264)
T ss_dssp CEEEECCBTTTEET---TEEC-HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCCCCGGGEEEHHHH
T ss_pred CEEEEeCCCceEeC---CEEC-cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCChhheecHHHH
Confidence 35689999999997 5577 899999999999999999999 88888888899999987666666665543
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=98.89 E-value=1.8e-09 Score=101.79 Aligned_cols=62 Identities=27% Similarity=0.466 Sum_probs=51.0
Q ss_pred EEcCcccHHHHHHHHHhcCCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhcccccccccchHHH
Q 041225 469 CRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRL 538 (658)
Q Consensus 469 ~~~~~~~K~~~v~~L~~~~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l 538 (658)
..+.+..|+.+++.+ +++++++|||+.||++|++.||++|+| +++.. .||+++.++.-+..+
T Consensus 134 ~~~~~~~k~~~l~~l---~~~~~i~iGD~~~Di~~~~~ag~~v~~-~~~~~----~ad~v~~~~~el~~~ 195 (201)
T 4ap9_A 134 IRLRFRDKGEFLKRF---RDGFILAMGDGYADAKMFERADMGIAV-GREIP----GADLLVKDLKELVDF 195 (201)
T ss_dssp EECCSSCHHHHHGGG---TTSCEEEEECTTCCHHHHHHCSEEEEE-SSCCT----TCSEEESSHHHHHHH
T ss_pred CcCCccCHHHHHHhc---CcCcEEEEeCCHHHHHHHHhCCceEEE-CCCCc----cccEEEccHHHHHHH
Confidence 456678899999988 468999999999999999999999999 44443 899999887654433
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.85 E-value=6.8e-09 Score=99.09 Aligned_cols=130 Identities=17% Similarity=0.235 Sum_probs=88.9
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCcccccc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCN 397 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~ 397 (658)
.+.+++.+.++.|+++|++++++||.....+..+.+.+|+.... ++.
T Consensus 82 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~--~~~------------------------------- 128 (219)
T 3kd3_A 82 LLTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPREN--IFA------------------------------- 128 (219)
T ss_dssp TBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGG--EEE-------------------------------
T ss_pred cCChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCccc--EEE-------------------------------
Confidence 47799999999999999999999999999888888888873210 000
Q ss_pred ccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHH
Q 041225 398 SKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKA 477 (658)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~ 477 (658)
..+... .......+.....+|+
T Consensus 129 -------------------------------------~~~~~~---------------------~~~~~~~~~~~~~~~~ 150 (219)
T 3kd3_A 129 -------------------------------------VETIWN---------------------SDGSFKELDNSNGACD 150 (219)
T ss_dssp -------------------------------------EEEEEC---------------------TTSBEEEEECTTSTTT
T ss_pred -------------------------------------eeeeec---------------------CCCceeccCCCCCCcc
Confidence 000000 0012223444444555
Q ss_pred HHHHHHHhc---CCCeEEEEcCCcCChhhhhh----cceeEEecCccchhhhhhcccccccccchHHHH
Q 041225 478 GIVDLIKSR---TDDMTLAIGDGANDVSMIQM----ADVGVGICGQEGRQAVMASDFAMGQFRFLKRLL 539 (658)
Q Consensus 478 ~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~----A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~ 539 (658)
..++.+++. +++++++|||+.||++|++. +++++++ +++....+..||+++.++.-+..++
T Consensus 151 ~~~~~l~~~~~~~~~~~~~vGD~~~Di~~~~~G~~~~~v~~~~-~~~~~~~~~~ad~v~~~~~el~~~l 218 (219)
T 3kd3_A 151 SKLSAFDKAKGLIDGEVIAIGDGYTDYQLYEKGYATKFIAYME-HIEREKVINLSKYVARNVAELASLI 218 (219)
T ss_dssp CHHHHHHHHGGGCCSEEEEEESSHHHHHHHHHTSCSEEEEECS-SCCCHHHHHHCSEEESSHHHHHHHH
T ss_pred cHHHHHHHHhCCCCCCEEEEECCHhHHHHHhCCCCcEEEeccC-ccccHHHHhhcceeeCCHHHHHHhh
Confidence 555555443 67899999999999999976 4555566 4555567889999998887665543
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=98.80 E-value=5.9e-09 Score=96.66 Aligned_cols=46 Identities=22% Similarity=0.110 Sum_probs=37.4
Q ss_pred HHhhhccceeeeccc------cccccCCChHHHHHHHHhcCCeEEEEecCCh
Q 041225 300 AALIECDLTLLGATG------IEDKLQDGVPEAIEALRQAGIKVWVLTGDKQ 345 (658)
Q Consensus 300 ~~~~d~DgTllg~~~------~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~ 345 (658)
++++|.||||+.... -+-++.|++.++|++|+++|++++++|+++.
T Consensus 3 ~v~~D~DGtL~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~Tn~~~ 54 (179)
T 3l8h_A 3 LIILDRDGVVNQDSDAFVKSPDEWIALPGSLQAIARLTQADWTVVLATNQSG 54 (179)
T ss_dssp EEEECSBTTTBCCCTTCCCSGGGCCBCTTHHHHHHHHHHTTCEEEEEEECTT
T ss_pred EEEEcCCCccccCCCccCCCHHHceECcCHHHHHHHHHHCCCEEEEEECCCc
Confidence 357899999986421 0125789999999999999999999999975
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.76 E-value=2.5e-08 Score=95.67 Aligned_cols=62 Identities=8% Similarity=0.050 Sum_probs=47.9
Q ss_pred HHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecC---ccchhhhhhcccccccccchHHH
Q 041225 477 AGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICG---QEGRQAVMASDFAMGQFRFLKRL 538 (658)
Q Consensus 477 ~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~---~~~~~~k~~AD~vl~~~~~l~~l 538 (658)
..+++.+.++ +++++++|||+.||++|++.||+++++-. ++....+..||+++.++.-+..-
T Consensus 153 ~~~~~~~~~~~~i~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~a~~v~~~~~el~~~ 220 (226)
T 1te2_A 153 PQVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSSLTELTAK 220 (226)
T ss_dssp THHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECSCGGGCCHH
T ss_pred hHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHcCCEEEEEcCCCCcccccccccCeEECCHHHHhHH
Confidence 6667766665 56889999999999999999999998822 22334678899999888765443
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=98.75 E-value=1.2e-08 Score=104.67 Aligned_cols=64 Identities=20% Similarity=0.201 Sum_probs=52.0
Q ss_pred EEcCcccHHHHHHHHHhc-CCCeEEEEcCCcCChhhhhhc----ceeEEecCccchhhhhhcccccccccc
Q 041225 469 CRVAPLQKAGIVDLIKSR-TDDMTLAIGDGANDVSMIQMA----DVGVGICGQEGRQAVMASDFAMGQFRF 534 (658)
Q Consensus 469 ~~~~~~~K~~~v~~L~~~-~~~~v~aiGDg~NDi~Ml~~A----~vgIam~~~~~~~~k~~AD~vl~~~~~ 534 (658)
+.+.+.+|+.+++.+... ....|++||||.||++||+.| |+|||| |+.+.+|+.||+++.+.+.
T Consensus 201 i~~~g~~K~~al~gi~~~~~~~~via~GDs~NDi~ml~~A~~~~g~~vam--na~~~lk~~Ad~v~~~~~~ 269 (332)
T 1y8a_A 201 KAVGAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAF--NGNEYALKHADVVIISPTA 269 (332)
T ss_dssp BCCCHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEE--SCCHHHHTTCSEEEECSST
T ss_pred ecCCCCCHHHHHhccChhhcCceEEEEeCcHhHHHHHHHHhhcCCeEEEe--cCCHHHHhhCcEEecCCCC
Confidence 567789999999965432 123399999999999999999 999999 4566799999999877544
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=98.74 E-value=8.9e-09 Score=97.64 Aligned_cols=120 Identities=16% Similarity=0.126 Sum_probs=89.0
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCC--ccEEEEcCCCHHHHHHHHHHHHHhcCcccCcccc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPD--MQQIIINGNSEEECKDLLADAKARYGVKSSNRTK 395 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~--~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~ 395 (658)
.+.+++.+.++.|+++|++++++|+.....+..+...+|+...- +.++
T Consensus 70 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~i~------------------------------ 119 (205)
T 3m9l_A 70 RPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAEADVL------------------------------ 119 (205)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSCGGGEE------------------------------
T ss_pred CCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcCcceEE------------------------------
Confidence 57889999999999999999999999998888888888763211 0000
Q ss_pred ccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCccc
Q 041225 396 CNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQ 475 (658)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~ 475 (658)
+.. . ..+..
T Consensus 120 ------------------------------------------------------------------~~~----~-~~~kp 128 (205)
T 3m9l_A 120 ------------------------------------------------------------------GRD----E-APPKP 128 (205)
T ss_dssp ------------------------------------------------------------------CTT----T-SCCTT
T ss_pred ------------------------------------------------------------------eCC----C-CCCCC
Confidence 000 0 11223
Q ss_pred HHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcce-eEEecCccchhhhhhcccccccccchHHHH
Q 041225 476 KAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADV-GVGICGQEGRQAVMASDFAMGQFRFLKRLL 539 (658)
Q Consensus 476 K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~v-gIam~~~~~~~~k~~AD~vl~~~~~l~~l~ 539 (658)
|..+++.+.+. +++++++|||+.||++|.+.||+ +|+| +++....+..||+++.++.-+..++
T Consensus 129 ~~~~~~~~~~~~g~~~~~~i~iGD~~~Di~~a~~aG~~~i~v-~~~~~~~~~~ad~v~~~~~el~~~~ 195 (205)
T 3m9l_A 129 HPGGLLKLAEAWDVSPSRMVMVGDYRFDLDCGRAAGTRTVLV-NLPDNPWPELTDWHARDCAQLRDLL 195 (205)
T ss_dssp SSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEC-SSSSCSCGGGCSEECSSHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCEEEEE-eCCCCcccccCCEEeCCHHHHHHHH
Confidence 44556666554 56889999999999999999999 9999 4555557888999999887766554
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.74 E-value=3.9e-08 Score=104.24 Aligned_cols=138 Identities=21% Similarity=0.275 Sum_probs=98.0
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEE-EcCCCHHHHHHHHHHHHHhcCcccCccccc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQII-INGNSEEECKDLLADAKARYGVKSSNRTKC 396 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~-~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~ 396 (658)
++.|++.+.++.|+++|++++++||.....+..+++.+|+...-...+. .++
T Consensus 256 ~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~~dg--------------------------- 308 (415)
T 3p96_A 256 ELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELEIVDG--------------------------- 308 (415)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEEEECEEEETT---------------------------
T ss_pred ccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccceeeeeEEEeCC---------------------------
Confidence 6889999999999999999999999999999999999998321000000 000
Q ss_pred cccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccH
Q 041225 397 NSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQK 476 (658)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K 476 (658)
...+ ....-...+..|
T Consensus 309 -----------------------------------------~~tg-----------------------~~~~~v~~~kpk 324 (415)
T 3p96_A 309 -----------------------------------------TLTG-----------------------RVVGPIIDRAGK 324 (415)
T ss_dssp -----------------------------------------EEEE-----------------------EECSSCCCHHHH
T ss_pred -----------------------------------------EEEe-----------------------eEccCCCCCcch
Confidence 0000 000011124567
Q ss_pred HHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhcccccccccchHHHHhh-hhhhHHH
Q 041225 477 AGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLV-HGHWNYQ 548 (658)
Q Consensus 477 ~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~-~gr~~~~ 548 (658)
..+++.+.+. +++++++||||.||++|++.||+|+++ ++.+.+++.||+++...++...+-++ .+|.-+.
T Consensus 325 ~~~~~~~~~~~gi~~~~~i~vGD~~~Di~~a~~aG~~va~--~~~~~~~~~ad~~i~~~~l~~ll~~l~~~~~~~~ 398 (415)
T 3p96_A 325 ATALREFAQRAGVPMAQTVAVGDGANDIDMLAAAGLGIAF--NAKPALREVADASLSHPYLDTVLFLLGVTRGEIE 398 (415)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE--SCCHHHHHHCSEEECSSCTTHHHHHTTCCHHHHH
T ss_pred HHHHHHHHHHcCcChhhEEEEECCHHHHHHHHHCCCeEEE--CCCHHHHHhCCEEEccCCHHHHHHHhCCCHHHHH
Confidence 8888888776 568899999999999999999999999 34445889999998877766655444 4544433
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.73 E-value=1.5e-08 Score=97.54 Aligned_cols=122 Identities=16% Similarity=0.124 Sum_probs=91.2
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCcccccc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCN 397 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~ 397 (658)
.+.+++.+.++.|+++|++++++|+.....+..+...+|+...-+.++.
T Consensus 86 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~------------------------------- 134 (226)
T 3mc1_A 86 KVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYFDAIVG------------------------------- 134 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEE-------------------------------
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhheeeeec-------------------------------
Confidence 5789999999999999999999999988888888888776322110000
Q ss_pred ccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHH
Q 041225 398 SKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKA 477 (658)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~ 477 (658)
.+....+..|.
T Consensus 135 ---------------------------------------------------------------------~~~~~~~kp~~ 145 (226)
T 3mc1_A 135 ---------------------------------------------------------------------SSLDGKLSTKE 145 (226)
T ss_dssp ---------------------------------------------------------------------ECTTSSSCSHH
T ss_pred ---------------------------------------------------------------------cCCCCCCCCCH
Confidence 01112345688
Q ss_pred HHHHHHHhc---CCCeEEEEcCCcCChhhhhhcce---eEEecCccchhh-hhhcccccccccchHHHH
Q 041225 478 GIVDLIKSR---TDDMTLAIGDGANDVSMIQMADV---GVGICGQEGRQA-VMASDFAMGQFRFLKRLL 539 (658)
Q Consensus 478 ~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~v---gIam~~~~~~~~-k~~AD~vl~~~~~l~~l~ 539 (658)
.+++.+.++ +++++++|||+.||++|.+.||+ +|++........ +..||+++.++.-+..++
T Consensus 146 ~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~s~~el~~~~ 214 (226)
T 3mc1_A 146 DVIRYAMESLNIKSDDAIMIGDREYDVIGALKNNLPSIGVTYGFGSYEELKNAGANYIVNSVDELHKKI 214 (226)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESSHHHHHHHHTTTCCEEEESSSSSCHHHHHHHTCSEEESSHHHHHHHH
T ss_pred HHHHHHHHHhCcCcccEEEECCCHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCEEECCHHHHHHHH
Confidence 888888876 56799999999999999999999 666633233333 588999999888776664
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=98.67 E-value=1.3e-08 Score=98.63 Aligned_cols=121 Identities=20% Similarity=0.149 Sum_probs=88.3
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCcccccc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCN 397 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~ 397 (658)
.+.+++.+.++.|+++|++++++|+.....+..+.+.+|+...-+.++.
T Consensus 104 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~------------------------------- 152 (237)
T 4ex6_A 104 LLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRLTVIAG------------------------------- 152 (237)
T ss_dssp GBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTCSEEEC-------------------------------
T ss_pred ccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhheeeEEe-------------------------------
Confidence 6789999999999999999999999998888888888776322110000
Q ss_pred ccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHH
Q 041225 398 SKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKA 477 (658)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~ 477 (658)
+ +....+..|.
T Consensus 153 -------------------------------------------~--------------------------~~~~~~kp~~ 163 (237)
T 4ex6_A 153 -------------------------------------------D--------------------------DSVERGKPHP 163 (237)
T ss_dssp -------------------------------------------T--------------------------TTSSSCTTSS
T ss_pred -------------------------------------------C--------------------------CCCCCCCCCH
Confidence 0 0011234456
Q ss_pred HHHHHHHhc---CCCeEEEEcCCcCChhhhhhcce---eEEecCccchhhhh-hcccccccccchHHH
Q 041225 478 GIVDLIKSR---TDDMTLAIGDGANDVSMIQMADV---GVGICGQEGRQAVM-ASDFAMGQFRFLKRL 538 (658)
Q Consensus 478 ~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~v---gIam~~~~~~~~k~-~AD~vl~~~~~l~~l 538 (658)
.+++.+.++ +++++++|||+.||++|.+.||+ +|++.++.....+. .||+++.++.-+..+
T Consensus 164 ~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~el~~~ 231 (237)
T 4ex6_A 164 DMALHVARGLGIPPERCVVIGDGVPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVVDSFPAAVTA 231 (237)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSEEESSHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCEEECCHHHHHHH
Confidence 666666665 56899999999999999999999 77874444344554 799999887766544
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=98.64 E-value=1.4e-07 Score=95.59 Aligned_cols=66 Identities=18% Similarity=0.206 Sum_probs=52.3
Q ss_pred HHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEe---cCChhHHHHHHHHcCcc-CCCccEEEEc
Q 041225 299 TAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLT---GDKQDTAISIALSCKLL-TPDMQQIIIN 368 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~T---Gr~~~~a~~ia~~~gl~-~~~~~~i~~~ 368 (658)
..+++|+||||+.. +.+.+++.+++++|+++|++++++| ||+........+.+|+. .....++..+
T Consensus 22 k~i~~D~DGTL~~~----~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~~~~~~~i~~~~ 91 (306)
T 2oyc_A 22 QGVLFDCDGVLWNG----ERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFGGLRAEQLFSSA 91 (306)
T ss_dssp SEEEECSBTTTEET----TEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCCSCCGGGEEEHH
T ss_pred CEEEECCCCcEecC----CccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHhcCCCcCChhhEEcHH
Confidence 45789999999974 4677899999999999999999999 68888777777888875 3334444433
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=98.62 E-value=6e-08 Score=90.53 Aligned_cols=60 Identities=22% Similarity=0.238 Sum_probs=49.0
Q ss_pred HHHhhhccceeeecc---------------------ccccccCCChHHHHHHHHhcCCeEEEEecCC-hhHHHHHHHHcC
Q 041225 299 TAALIECDLTLLGAT---------------------GIEDKLQDGVPEAIEALRQAGIKVWVLTGDK-QDTAISIALSCK 356 (658)
Q Consensus 299 ~~~~~d~DgTllg~~---------------------~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~-~~~a~~ia~~~g 356 (658)
..+++|+||||.... .-.-++.|++.++|++|+++|++++++||++ ...+..+.+.+|
T Consensus 28 k~vifDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~g 107 (187)
T 2wm8_A 28 KLAVFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQDVRLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFD 107 (187)
T ss_dssp SEEEECSBTTTBSSCTTTSSCSCCEECTTSCEECTTCCEECCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTT
T ss_pred CEEEEcCCCCcchHHHhhccCcchhhhcccchhhccCcccCcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcC
Confidence 457899999998321 1123678999999999999999999999999 688888888888
Q ss_pred cc
Q 041225 357 LL 358 (658)
Q Consensus 357 l~ 358 (658)
+.
T Consensus 108 l~ 109 (187)
T 2wm8_A 108 LF 109 (187)
T ss_dssp CT
T ss_pred cH
Confidence 73
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.61 E-value=1.1e-07 Score=96.45 Aligned_cols=127 Identities=17% Similarity=0.213 Sum_probs=88.1
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCcccccc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCN 397 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~ 397 (658)
++.|++.+.++.|+++|++++++||.....+..+++.+|+...-+..+...
T Consensus 179 ~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f~~~l~~~----------------------------- 229 (317)
T 4eze_A 179 TLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSNTVEIR----------------------------- 229 (317)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEECEEEE-----------------------------
T ss_pred EECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEEEEEEEee-----------------------------
Confidence 588999999999999999999999999999999999998732111000000
Q ss_pred ccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHH
Q 041225 398 SKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKA 477 (658)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~ 477 (658)
+... . .........+..|.
T Consensus 230 -------------------------------------------dg~~-----------------t-g~i~~~~~~~kpkp 248 (317)
T 4eze_A 230 -------------------------------------------DNVL-----------------T-DNITLPIMNAANKK 248 (317)
T ss_dssp -------------------------------------------TTEE-----------------E-EEECSSCCCHHHHH
T ss_pred -------------------------------------------CCee-----------------e-eeEecccCCCCCCH
Confidence 0000 0 00000011234567
Q ss_pred HHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhcccccccccchH
Q 041225 478 GIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLK 536 (658)
Q Consensus 478 ~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~ 536 (658)
.+++.+.+. +++++++|||+.||++|.+.||+|+++ + +...++..|+.++...++..
T Consensus 249 ~~~~~~~~~lgv~~~~~i~VGDs~~Di~aa~~AG~~va~-~-~~~~~~~~a~~~i~~~~L~~ 308 (317)
T 4eze_A 249 QTLVDLAARLNIATENIIACGDGANDLPMLEHAGTGIAW-K-AKPVVREKIHHQINYHGFEL 308 (317)
T ss_dssp HHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-S-CCHHHHHHCCEEESSSCGGG
T ss_pred HHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHCCCeEEe-C-CCHHHHHhcCeeeCCCCHHH
Confidence 777777665 567899999999999999999999999 3 34457888998876444433
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=98.60 E-value=9e-08 Score=91.24 Aligned_cols=47 Identities=26% Similarity=0.346 Sum_probs=38.4
Q ss_pred HHHhhhccceeeeccccc-----cccCCChHHHHHHHHhcCCeEEEEecCCh
Q 041225 299 TAALIECDLTLLGATGIE-----DKLQDGVPEAIEALRQAGIKVWVLTGDKQ 345 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~-----d~l~~~~~~aI~~l~~~GI~v~i~TGr~~ 345 (658)
..+++|.||||+....+. -++.|++.++|++|+++|++++++|+++.
T Consensus 26 k~v~~D~DGTL~~~~~~~~~~~~~~~~pg~~e~L~~L~~~G~~~~ivTn~~~ 77 (211)
T 2gmw_A 26 PAIFLDRDGTINVDHGYVHEIDNFEFIDGVIDAMRELKKMGFALVVVTNQSG 77 (211)
T ss_dssp CEEEECSBTTTBCCCSSCCSGGGCCBCTTHHHHHHHHHHTTCEEEEEEECTH
T ss_pred CEEEEcCCCCeECCCCcccCcccCcCCcCHHHHHHHHHHCCCeEEEEECcCC
Confidence 356899999998642111 26789999999999999999999999984
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=98.59 E-value=6.5e-08 Score=94.01 Aligned_cols=122 Identities=15% Similarity=0.102 Sum_probs=89.3
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCcccccc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCN 397 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~ 397 (658)
.+.+++.+.++.|+++|++++++|+.....+..+...+|+...-+.++.
T Consensus 110 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~------------------------------- 158 (240)
T 3sd7_A 110 KIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYFKYIAG------------------------------- 158 (240)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEE-------------------------------
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhhEEEEEe-------------------------------
Confidence 6789999999999999999999999988888888888877432111100
Q ss_pred ccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHH
Q 041225 398 SKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKA 477 (658)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~ 477 (658)
.+....+..|.
T Consensus 159 ---------------------------------------------------------------------~~~~~~~kp~~ 169 (240)
T 3sd7_A 159 ---------------------------------------------------------------------SNLDGTRVNKN 169 (240)
T ss_dssp ---------------------------------------------------------------------ECTTSCCCCHH
T ss_pred ---------------------------------------------------------------------ccccCCCCCCH
Confidence 01112245677
Q ss_pred HHHHHHHhc---C-CCeEEEEcCCcCChhhhhhcce---eEEecCccchh-hhhhcccccccccchHHHH
Q 041225 478 GIVDLIKSR---T-DDMTLAIGDGANDVSMIQMADV---GVGICGQEGRQ-AVMASDFAMGQFRFLKRLL 539 (658)
Q Consensus 478 ~~v~~L~~~---~-~~~v~aiGDg~NDi~Ml~~A~v---gIam~~~~~~~-~k~~AD~vl~~~~~l~~l~ 539 (658)
.+++.+.+. + ++++++|||+.||++|.+.||+ +|++....... .+..||+++.++.-+..++
T Consensus 170 ~~~~~~~~~~g~~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~el~~~l 239 (240)
T 3sd7_A 170 EVIQYVLDLCNVKDKDKVIMVGDRKYDIIGAKKIGIDSIGVLYGYGSFEEISESEPTYIVENVESIKDIL 239 (240)
T ss_dssp HHHHHHHHHHTCCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSCCHHHHHHHCCSEEESSSTTHHHHH
T ss_pred HHHHHHHHHcCCCCCCcEEEECCCHHHHHHHHHCCCCEEEEeCCCCCHHHHhhcCCCEEECCHHHHHHHh
Confidence 888887776 5 7899999999999999999998 44442222222 2578999999988776654
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=98.57 E-value=4.1e-08 Score=93.83 Aligned_cols=59 Identities=5% Similarity=-0.098 Sum_probs=45.9
Q ss_pred HHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhcccccccccchHHH
Q 041225 478 GIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRL 538 (658)
Q Consensus 478 ~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l 538 (658)
.+++.+.++ +++++++|||+.||++|++.||++++|. ++...++ .||+++.++.-+...
T Consensus 149 ~~~~~~~~~lgi~~~~~i~iGD~~nDi~~a~~aG~~~~~~-~~~~~~~-~a~~v~~~~~el~~~ 210 (221)
T 2wf7_A 149 DIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGV-GRPEDLG-DDIVIVPDTSHYTLE 210 (221)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEE-SCHHHHC-SSSEEESSGGGCCHH
T ss_pred HHHHHHHHHcCCChhHeEEEeCCHHHHHHHHHCCCEEEEE-CCHHHhc-cccchhcCHHhCCHH
Confidence 355555544 5689999999999999999999999994 4445567 899999887765443
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.54 E-value=4.6e-08 Score=94.34 Aligned_cols=122 Identities=18% Similarity=0.046 Sum_probs=87.6
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCcccccc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCN 397 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~ 397 (658)
.+.+++.+.++.|++.|++++++|+.....+..+....|+...-+.++.
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~------------------------------- 139 (233)
T 3s6j_A 91 IALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINKINIVT------------------------------- 139 (233)
T ss_dssp EECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTTSSCEEC-------------------------------
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhhhheeec-------------------------------
Confidence 5778999999999999999999999998888888888776432111000
Q ss_pred ccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHH
Q 041225 398 SKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKA 477 (658)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~ 477 (658)
. +....+..|.
T Consensus 140 -------------------------------------------~--------------------------~~~~~~kp~~ 150 (233)
T 3s6j_A 140 -------------------------------------------R--------------------------DDVSYGKPDP 150 (233)
T ss_dssp -------------------------------------------G--------------------------GGSSCCTTST
T ss_pred -------------------------------------------c--------------------------ccCCCCCCCh
Confidence 0 0001233456
Q ss_pred HHHHHHHhc---CCCeEEEEcCCcCChhhhhhcce---eEEecCccchhhhhh-cccccccccchHHHH
Q 041225 478 GIVDLIKSR---TDDMTLAIGDGANDVSMIQMADV---GVGICGQEGRQAVMA-SDFAMGQFRFLKRLL 539 (658)
Q Consensus 478 ~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~v---gIam~~~~~~~~k~~-AD~vl~~~~~l~~l~ 539 (658)
.+++.+.+. +++++++|||+.||++|.+.||+ +|++..+.....+.. ||+++.++.-+..++
T Consensus 151 ~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~ad~v~~~~~el~~~l 219 (233)
T 3s6j_A 151 DLFLAAAKKIGAPIDECLVIGDAIWDMLAARRCKATGVGLLSGGYDIGELERAGALRVYEDPLDLLNHL 219 (233)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHTTCEEEEEGGGSCCHHHHHHTTCSEEESSHHHHHHTG
T ss_pred HHHHHHHHHhCCCHHHEEEEeCCHHhHHHHHHCCCEEEEEeCCCCchHhHHhcCCCEEECCHHHHHHHH
Confidence 667776665 56889999999999999999999 444533444445554 999999887766553
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.53 E-value=1.1e-07 Score=91.81 Aligned_cols=60 Identities=18% Similarity=0.098 Sum_probs=42.0
Q ss_pred HHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhcccccccccchHHH
Q 041225 477 AGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRL 538 (658)
Q Consensus 477 ~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l 538 (658)
..+++.+.++ +++++++|||+.||+.|.+.||++++|. +.....+ .||+++.++.-+...
T Consensus 149 ~~~~~~~~~~lgi~~~~~i~vGDs~~Di~~a~~aG~~~~~~-~~~~~~~-~ad~v~~s~~el~~~ 211 (233)
T 3nas_A 149 PDIFLTAAAMLDVSPADCAAIEDAEAGISAIKSAGMFAVGV-GQGQPML-GADLVVRQTSDLTLE 211 (233)
T ss_dssp CCHHHHHHHHHTSCGGGEEEEECSHHHHHHHHHTTCEEEEC-C--------CSEECSSGGGCCHH
T ss_pred hHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHcCCEEEEE-CCccccc-cCCEEeCChHhCCHH
Confidence 3345555444 5689999999999999999999999994 4444455 899999888766533
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=98.52 E-value=8.7e-08 Score=91.68 Aligned_cols=63 Identities=17% Similarity=0.099 Sum_probs=44.2
Q ss_pred HHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCc---cchhhhhh-cccccccccchHHH
Q 041225 476 KAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQ---EGRQAVMA-SDFAMGQFRFLKRL 538 (658)
Q Consensus 476 K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~---~~~~~k~~-AD~vl~~~~~l~~l 538 (658)
|..+++.+.++ +++++++|||+.||++|++.||++++|-++ ....++.. ||+++.++.-+..+
T Consensus 147 ~~~~~~~~~~~~~~~~~~~i~iGD~~nDi~~~~~aG~~~~~~~~~~~~~~~l~~~~ad~v~~~~~el~~~ 216 (225)
T 3d6j_A 147 DPEGLLLAIDRLKACPEEVLYIGDSTVDAGTAAAAGVSFTGVTSGMTTAQEFQAYPYDRIISTLGQLISV 216 (225)
T ss_dssp STHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEETTSSCCTTGGGGSCCSEEESSGGGGC--
T ss_pred ChHHHHHHHHHhCCChHHeEEEcCCHHHHHHHHHCCCeEEEECCCCCChHHHhhcCCCEEECCHHHHHHh
Confidence 34555555554 567899999999999999999999877222 22334544 89999887766544
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=98.50 E-value=3.1e-07 Score=90.28 Aligned_cols=65 Identities=18% Similarity=0.205 Sum_probs=48.3
Q ss_pred HHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEe---cCChhHHHHHHHHcCccCCCccEEEE
Q 041225 299 TAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLT---GDKQDTAISIALSCKLLTPDMQQIII 367 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~T---Gr~~~~a~~ia~~~gl~~~~~~~i~~ 367 (658)
..+++|+||||++. +..-+++.++++.++++|++++++| |++...+......+|+......++..
T Consensus 8 k~i~fDlDGTLld~----~~~~~~~~~ai~~l~~~G~~~~~~t~~~~~~~~~~~~~l~~~g~~~~~~~~~~~ 75 (259)
T 2ho4_A 8 KAVLVDLNGTLHIE----DAAVPGAQEALKRLRATSVMVRFVTNTTKETKKDLLERLKKLEFEISEDEIFTS 75 (259)
T ss_dssp CEEEEESSSSSCC-------CCTTHHHHHHHHHTSSCEEEEEECCSSCCHHHHHHHHHHTTCCCCGGGEEEH
T ss_pred CEEEEeCcCcEEeC----CEeCcCHHHHHHHHHHCCCeEEEEeCCCCcCHHHHHHHHHHcCCCccHHHeecH
Confidence 35689999999985 3344789999999999999999999 66666666666777875554455443
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.47 E-value=1.2e-07 Score=89.24 Aligned_cols=56 Identities=16% Similarity=0.229 Sum_probs=41.2
Q ss_pred HHHHHHHHhc---CCCeEEEEcCCcCChhhhhhccee-EEecCccchhhhhhcccccccccchHH
Q 041225 477 AGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVG-VGICGQEGRQAVMASDFAMGQFRFLKR 537 (658)
Q Consensus 477 ~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vg-Iam~~~~~~~~k~~AD~vl~~~~~l~~ 537 (658)
..+++.+.++ +++++++|||+.||++|++.||++ |+| +++. . .||+++.++.-+..
T Consensus 143 ~~~~~~~~~~~~i~~~~~~~iGD~~nDi~~~~~aG~~~i~~-~~~~-~---~a~~v~~~~~el~~ 202 (207)
T 2go7_A 143 PEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINF-LEST-Y---EGNHRIQALADISR 202 (207)
T ss_dssp SHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEES-SCCS-C---TTEEECSSTTHHHH
T ss_pred cHHHHHHHHHhCCCcccEEEECCCHHHHHHHHHCCCeEEEE-ecCC-C---CCCEEeCCHHHHHH
Confidence 3344444443 568899999999999999999998 677 4443 2 68999887765543
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=98.45 E-value=2.8e-07 Score=87.26 Aligned_cols=120 Identities=10% Similarity=-0.023 Sum_probs=84.8
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCcccccc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCN 397 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~ 397 (658)
.+.+++.+.++.|++.|++++++|+.....+..+.+.+|+...-+.++...
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~----------------------------- 139 (214)
T 3e58_A 89 LIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFFDIVLSGE----------------------------- 139 (214)
T ss_dssp HBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGG-----------------------------
T ss_pred CcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhheeeEeecc-----------------------------
Confidence 578899999999999999999999999988888888888743211111000
Q ss_pred ccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHH
Q 041225 398 SKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKA 477 (658)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~ 477 (658)
....+..|.
T Consensus 140 -----------------------------------------------------------------------~~~~~kp~~ 148 (214)
T 3e58_A 140 -----------------------------------------------------------------------EFKESKPNP 148 (214)
T ss_dssp -----------------------------------------------------------------------GCSSCTTSS
T ss_pred -----------------------------------------------------------------------cccCCCCCh
Confidence 000112234
Q ss_pred HHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCcc-chhhhhhcccccccccchHH
Q 041225 478 GIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQE-GRQAVMASDFAMGQFRFLKR 537 (658)
Q Consensus 478 ~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~-~~~~k~~AD~vl~~~~~l~~ 537 (658)
.+++.+.++ +++++++|||+.||++|.+.||+++++.++. ....+..||+++.++.-+..
T Consensus 149 ~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~a~~~~~~~~el~~ 212 (214)
T 3e58_A 149 EIYLTALKQLNVQASRALIIEDSEKGIAAGVAADVEVWAIRDNEFGMDQSAAKGLLDSLTDVLD 212 (214)
T ss_dssp HHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCCCCTTSSEEESSGGGGGG
T ss_pred HHHHHHHHHcCCChHHeEEEeccHhhHHHHHHCCCEEEEECCCCccchhccHHHHHHHHHHHHh
Confidence 455555544 5688999999999999999999988773432 22345789999988776543
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=98.45 E-value=1.1e-07 Score=94.00 Aligned_cols=40 Identities=33% Similarity=0.402 Sum_probs=33.6
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKL 357 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl 357 (658)
.+.+++.+.++.|++.|++++++|+.....+..+...+|+
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~ 142 (267)
T 1swv_A 103 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAAL 142 (267)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHH
T ss_pred ccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCC
Confidence 4678999999999999999999999988777776666554
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=98.45 E-value=1.6e-06 Score=82.01 Aligned_cols=122 Identities=23% Similarity=0.190 Sum_probs=86.4
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCcccccc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCN 397 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~ 397 (658)
++.|++.+.++.|+++ ++++++|+.....+..+.+.+|+...-...+
T Consensus 69 ~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~~f~~~~-------------------------------- 115 (206)
T 1rku_A 69 KPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTLLCHKL-------------------------------- 115 (206)
T ss_dssp CCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCCCEEEEEE--------------------------------
T ss_pred CCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCcceeccee--------------------------------
Confidence 5789999999999999 9999999999999999999888742100000
Q ss_pred ccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHH
Q 041225 398 SKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKA 477 (658)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~ 477 (658)
.... .........+.|..|.
T Consensus 116 ----------------------------------------~~~~--------------------~~~~~~~~~p~p~~~~ 135 (206)
T 1rku_A 116 ----------------------------------------EIDD--------------------SDRVVGYQLRQKDPKR 135 (206)
T ss_dssp ----------------------------------------EECT--------------------TSCEEEEECCSSSHHH
T ss_pred ----------------------------------------EEcC--------------------CceEEeeecCCCchHH
Confidence 0000 0000011237888999
Q ss_pred HHHHHHHhcCCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhc-ccc-cccccch
Q 041225 478 GIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMAS-DFA-MGQFRFL 535 (658)
Q Consensus 478 ~~v~~L~~~~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~A-D~v-l~~~~~l 535 (658)
.+++.+... +.++++|||+.||++|.+.||+++++ +... ..+..+ +++ +.++.-+
T Consensus 136 ~~l~~l~~~-~~~~~~iGD~~~Di~~a~~aG~~~~~-~~~~-~~~~~~~~~~~~~~~~~l 192 (206)
T 1rku_A 136 QSVIAFKSL-YYRVIAAGDSYNDTTMLSEAHAGILF-HAPE-NVIREFPQFPAVHTYEDL 192 (206)
T ss_dssp HHHHHHHHT-TCEEEEEECSSTTHHHHHHSSEEEEE-SCCH-HHHHHCTTSCEECSHHHH
T ss_pred HHHHHHHhc-CCEEEEEeCChhhHHHHHhcCccEEE-CCcH-HHHHHHhhhccccchHHH
Confidence 999999775 67999999999999999999999998 3332 355544 443 4554433
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=98.41 E-value=3.5e-07 Score=87.94 Aligned_cols=121 Identities=15% Similarity=0.099 Sum_probs=86.4
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCcccccc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCN 397 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~ 397 (658)
.+.+++.+.++.|+++|++++++|+.....+..+...+|+...-+.++...
T Consensus 96 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~----------------------------- 146 (230)
T 3um9_A 96 TPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSFDHLISVD----------------------------- 146 (230)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGCSEEEEGG-----------------------------
T ss_pred CCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhcceeEehh-----------------------------
Confidence 678999999999999999999999999888888888777632211110000
Q ss_pred ccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHH
Q 041225 398 SKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKA 477 (658)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~ 477 (658)
....+..|.
T Consensus 147 -----------------------------------------------------------------------~~~~~kp~~ 155 (230)
T 3um9_A 147 -----------------------------------------------------------------------EVRLFKPHQ 155 (230)
T ss_dssp -----------------------------------------------------------------------GTTCCTTCH
T ss_pred -----------------------------------------------------------------------hcccCCCCh
Confidence 001122345
Q ss_pred HHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecC---ccchhhhhhcccccccccchHHH
Q 041225 478 GIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICG---QEGRQAVMASDFAMGQFRFLKRL 538 (658)
Q Consensus 478 ~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~---~~~~~~k~~AD~vl~~~~~l~~l 538 (658)
.+++.+.++ +++++++|||+.||+.|.+.||+++++-. +.....+..+|+++.++.-+..+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~ 222 (230)
T 3um9_A 156 KVYELAMDTLHLGESEILFVSCNSWDATGAKYFGYPVCWINRSNGVFDQLGVVPDIVVSDVGVLASR 222 (230)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCCEEEECTTSCCCCCSSCCCSEEESSHHHHHHT
T ss_pred HHHHHHHHHhCCCcccEEEEeCCHHHHHHHHHCCCEEEEEeCCCCccccccCCCcEEeCCHHHHHHH
Confidence 566666555 56889999999999999999999998822 23334567899999888765544
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.41 E-value=5e-07 Score=87.00 Aligned_cols=62 Identities=13% Similarity=0.139 Sum_probs=44.9
Q ss_pred HHHHHHHHhc---CCCeEEEEcCCc-CChhhhhhcceeEEec--CccchhhhhhcccccccccchHHH
Q 041225 477 AGIVDLIKSR---TDDMTLAIGDGA-NDVSMIQMADVGVGIC--GQEGRQAVMASDFAMGQFRFLKRL 538 (658)
Q Consensus 477 ~~~v~~L~~~---~~~~v~aiGDg~-NDi~Ml~~A~vgIam~--~~~~~~~k~~AD~vl~~~~~l~~l 538 (658)
..+++.++++ +++++++|||+. ||++|.+.||++++|- +++....+..+|+++.++.-+..+
T Consensus 161 ~~~~~~~~~~lgi~~~~~~~iGD~~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~ 228 (235)
T 2om6_A 161 KEMFEKVLNSFEVKPEESLHIGDTYAEDYQGARKVGMWAVWINQEGDKVRKLEERGFEIPSIANLKDV 228 (235)
T ss_dssp HHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTSEEEEECTTCCSCEEEETTEEEESSGGGHHHH
T ss_pred HHHHHHHHHHcCCCccceEEECCChHHHHHHHHHCCCEEEEECCCCCCcccCCCCcchHhhHHHHHHH
Confidence 3455555544 578999999999 9999999999999882 233333456688888887665443
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=98.39 E-value=1.4e-07 Score=94.26 Aligned_cols=125 Identities=12% Similarity=0.056 Sum_probs=87.2
Q ss_pred ccCCChHHHHHHHHhcCC--eEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCcccc
Q 041225 318 KLQDGVPEAIEALRQAGI--KVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTK 395 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI--~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~ 395 (658)
.+.+++.++++.|+++|+ +++++|+.....+..+.+.+|+...-+.++...
T Consensus 142 ~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~v~~~~--------------------------- 194 (282)
T 3nuq_A 142 KPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLFDGLTYCD--------------------------- 194 (282)
T ss_dssp CCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTSCSEEECCC---------------------------
T ss_pred CcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCcccccceEEEec---------------------------
Confidence 567889999999999999 999999999888888888888743211111000
Q ss_pred ccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCccc
Q 041225 396 CNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQ 475 (658)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~ 475 (658)
........+..
T Consensus 195 ---------------------------------------------------------------------~~~~~~~~~Kp 205 (282)
T 3nuq_A 195 ---------------------------------------------------------------------YSRTDTLVCKP 205 (282)
T ss_dssp ---------------------------------------------------------------------CSSCSSCCCTT
T ss_pred ---------------------------------------------------------------------cCCCcccCCCc
Confidence 00000122345
Q ss_pred HHHHHHHHHhc---CC-CeEEEEcCCcCChhhhhhcceeEEecCccch-----hhhhhcccccccccchHHH
Q 041225 476 KAGIVDLIKSR---TD-DMTLAIGDGANDVSMIQMADVGVGICGQEGR-----QAVMASDFAMGQFRFLKRL 538 (658)
Q Consensus 476 K~~~v~~L~~~---~~-~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~-----~~k~~AD~vl~~~~~l~~l 538 (658)
|..+++.+.++ ++ +++++|||+.||+.|.+.||+|++|...... .....||+++.+..-+..+
T Consensus 206 ~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~ad~vi~sl~el~~~ 277 (282)
T 3nuq_A 206 HVKAFEKAMKESGLARYENAYFIDDSGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVISDILELPHV 277 (282)
T ss_dssp SHHHHHHHHHHHTCCCGGGEEEEESCHHHHHHHHHHTCSEEEEECSCCC----CCCCTTCEEESSGGGGGGT
T ss_pred CHHHHHHHHHHcCCCCcccEEEEcCCHHHHHHHHHCCCeEEEEEcCCccccccccCCCCCEEeCCHHHHHHH
Confidence 67777777765 56 8999999999999999999998877322221 1134788999888766544
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.39 E-value=8.3e-07 Score=85.24 Aligned_cols=115 Identities=14% Similarity=-0.010 Sum_probs=83.3
Q ss_pred ccCCChHHHHHHHHhcC-CeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCccccc
Q 041225 318 KLQDGVPEAIEALRQAG-IKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKC 396 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~G-I~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~ 396 (658)
.+.+++.+.++.|+++| ++++++|+.....+..+...+|+...-+
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~f~---------------------------------- 150 (234)
T 3ddh_A 105 ELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYFD---------------------------------- 150 (234)
T ss_dssp CBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGGCS----------------------------------
T ss_pred CcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhhhh----------------------------------
Confidence 57789999999999999 9999999988877777777776632100
Q ss_pred cccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccH
Q 041225 397 NSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQK 476 (658)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K 476 (658)
. +... +..|
T Consensus 151 --------------------------------------------------------------------~-~~~~--~kpk 159 (234)
T 3ddh_A 151 --------------------------------------------------------------------H-IEVM--SDKT 159 (234)
T ss_dssp --------------------------------------------------------------------E-EEEE--SCCS
T ss_pred --------------------------------------------------------------------e-eeec--CCCC
Confidence 1 1111 2347
Q ss_pred HHHHHHHHhc---CCCeEEEEcCCc-CChhhhhhcceeEEec------Cccchhhhhh-cccccccccchHH
Q 041225 477 AGIVDLIKSR---TDDMTLAIGDGA-NDVSMIQMADVGVGIC------GQEGRQAVMA-SDFAMGQFRFLKR 537 (658)
Q Consensus 477 ~~~v~~L~~~---~~~~v~aiGDg~-NDi~Ml~~A~vgIam~------~~~~~~~k~~-AD~vl~~~~~l~~ 537 (658)
..+++.++++ +++++++|||+. ||+.|.+.||+++++- +++....+.. +|+++.++.-+..
T Consensus 160 ~~~~~~~~~~lgi~~~~~i~iGD~~~~Di~~a~~aG~~~v~v~~~~~~g~~~~~~~~~~~d~v~~~l~el~~ 231 (234)
T 3ddh_A 160 EKEYLRLLSILQIAPSELLMVGNSFKSDIQPVLSLGGYGVHIPFEVMWKHEVTETFAHERLKQVKRLDDLLS 231 (234)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHTCEEEECCCCTTCCCC---CCCCTTEEECSSGGGHHH
T ss_pred HHHHHHHHHHhCCCcceEEEECCCcHHHhHHHHHCCCeEEEecCCcccccCCcccccCCCceecccHHHHHH
Confidence 7888888776 678999999996 9999999999998773 1222222333 4899888766544
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=98.38 E-value=1e-06 Score=84.96 Aligned_cols=41 Identities=15% Similarity=0.063 Sum_probs=38.2
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
.+.|++.+.|+.|+++|++++++||.....+..+++.+|+.
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~ 132 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQ 132 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCC
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 57899999999999999999999999999999999999973
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=98.36 E-value=1.9e-07 Score=89.47 Aligned_cols=45 Identities=29% Similarity=0.258 Sum_probs=37.2
Q ss_pred Hhhhccceeeecccc-----ccccCCChHHHHHHHHhcCCeEEEEecCCh
Q 041225 301 ALIECDLTLLGATGI-----EDKLQDGVPEAIEALRQAGIKVWVLTGDKQ 345 (658)
Q Consensus 301 ~~~d~DgTllg~~~~-----~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~ 345 (658)
+++|+|||++....+ ..++.|++.++|++|+++|++++++|+++.
T Consensus 34 i~~D~DGtl~~~~~y~~~~~~~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~ 83 (218)
T 2o2x_A 34 LFLDRDGTINVDTDYPSDPAEIVLRPQMLPAIATANRAGIPVVVVTNQSG 83 (218)
T ss_dssp EEECSBTTTBCCCSCTTCGGGCCBCGGGHHHHHHHHHHTCCEEEEEECHH
T ss_pred EEEeCCCCcCCCCcccCCcccCeECcCHHHHHHHHHHCCCEEEEEcCcCC
Confidence 568999999864110 136789999999999999999999999987
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.36 E-value=3e-07 Score=91.20 Aligned_cols=40 Identities=28% Similarity=0.232 Sum_probs=35.0
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKL 357 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl 357 (658)
.+.+++.+.++.|++.|++++++|+.....+..+...+|+
T Consensus 111 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~ 150 (277)
T 3iru_A 111 QLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKE 150 (277)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHH
T ss_pred ccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCc
Confidence 5778999999999999999999999998887777776665
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=98.35 E-value=8.1e-07 Score=85.59 Aligned_cols=63 Identities=16% Similarity=0.237 Sum_probs=46.9
Q ss_pred HHHHHHHHHhc---CCCeEEEEcCCc-CChhhhhhcce---eEEecCccchhhhhhcccccccccchHHHH
Q 041225 476 KAGIVDLIKSR---TDDMTLAIGDGA-NDVSMIQMADV---GVGICGQEGRQAVMASDFAMGQFRFLKRLL 539 (658)
Q Consensus 476 K~~~v~~L~~~---~~~~v~aiGDg~-NDi~Ml~~A~v---gIam~~~~~~~~k~~AD~vl~~~~~l~~l~ 539 (658)
|..+++.+.++ +++++++|||+. ||+.|.+.||+ +|++ ++.....+..||+++.++.-+..++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~-~~~~~~~~~~a~~~~~~~~el~~~l 226 (234)
T 3u26_A 157 HPRIFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDR-KGEKREFWDKCDFIVSDLREVIKIV 226 (234)
T ss_dssp SHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECS-SSTTGGGGGGCSEEESSTHHHHHHH
T ss_pred CHHHHHHHHHHcCCCchhEEEEcCCcHHHHHHHHHcCCEEEEECC-CCCccccccCCCEeeCCHHHHHHHH
Confidence 34555555554 568999999997 99999999995 5555 4555556779999999887665553
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=98.34 E-value=3.8e-07 Score=87.95 Aligned_cols=122 Identities=11% Similarity=0.004 Sum_probs=86.7
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCcccccc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCN 397 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~ 397 (658)
.+.+++.++++.|+++|++++++|+.....+..+...+|+...-+.++....
T Consensus 99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~---------------------------- 150 (233)
T 3umb_A 99 SAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLFDHVLSVDA---------------------------- 150 (233)
T ss_dssp EECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTCSEEEEGGG----------------------------
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhcCEEEEecc----------------------------
Confidence 5779999999999999999999999998888888888877432111110000
Q ss_pred ccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHH
Q 041225 398 SKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKA 477 (658)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~ 477 (658)
...+..|.
T Consensus 151 ------------------------------------------------------------------------~~~~kp~~ 158 (233)
T 3umb_A 151 ------------------------------------------------------------------------VRLYKTAP 158 (233)
T ss_dssp ------------------------------------------------------------------------TTCCTTSH
T ss_pred ------------------------------------------------------------------------cCCCCcCH
Confidence 00111233
Q ss_pred HHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEec---CccchhhhhhcccccccccchHHHH
Q 041225 478 GIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGIC---GQEGRQAVMASDFAMGQFRFLKRLL 539 (658)
Q Consensus 478 ~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~---~~~~~~~k~~AD~vl~~~~~l~~l~ 539 (658)
.+++.+.++ +++++++|||+.||+.|.+.||+++++- ++.....+..||+++.++.-+..++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~~G~~~~~v~~~~~~~~~~~~~~~~v~~~~~el~~~l 226 (233)
T 3umb_A 159 AAYALAPRAFGVPAAQILFVSSNGWDACGATWHGFTTFWINRLGHPPEALDVAPAAAGHDMRDLLQFV 226 (233)
T ss_dssp HHHTHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCEEEEECTTCCCCCSSSCCCSEEESSHHHHHHHH
T ss_pred HHHHHHHHHhCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCchhccCCCCEEECCHHHHHHHH
Confidence 444444443 5689999999999999999999999882 3333445678999999887766554
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=98.30 E-value=1.9e-06 Score=82.70 Aligned_cols=128 Identities=19% Similarity=0.236 Sum_probs=86.7
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCcccccc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCN 397 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~ 397 (658)
++.|++.++|+.|+++|++++++||.+...+..+.+.+|+... .++..
T Consensus 86 ~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~--~~f~~------------------------------ 133 (225)
T 1nnl_A 86 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPAT--NVFAN------------------------------ 133 (225)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGG--GEEEE------------------------------
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCcc--cEEee------------------------------
Confidence 6889999999999999999999999999999999999887420 00000
Q ss_pred ccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEc-----C
Q 041225 398 SKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRV-----A 472 (658)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~-----~ 472 (658)
.+.... ...+..... .
T Consensus 134 --------------------------------------~~~~~~---------------------~~~~~~~~~~~~~~~ 154 (225)
T 1nnl_A 134 --------------------------------------RLKFYF---------------------NGEYAGFDETQPTAE 154 (225)
T ss_dssp --------------------------------------CEEECT---------------------TSCEEEECTTSGGGS
T ss_pred --------------------------------------eEEEcC---------------------CCcEecCCCCCcccC
Confidence 000000 000001110 1
Q ss_pred cccHHHHHHHHHhc-CCCeEEEEcCCcCChhhhhhcceeEEecCcc-chhhhhhcccccccccchH
Q 041225 473 PLQKAGIVDLIKSR-TDDMTLAIGDGANDVSMIQMADVGVGICGQE-GRQAVMASDFAMGQFRFLK 536 (658)
Q Consensus 473 ~~~K~~~v~~L~~~-~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~-~~~~k~~AD~vl~~~~~l~ 536 (658)
+..|..+++.+.+. +.+++++|||+.||++|.+.||++|++.... .......+|+++.++.-+.
T Consensus 155 ~~~Kp~~~~~~~~~~~~~~~~~vGDs~~Di~~a~~ag~~i~~~~~~~~~~~~~~~~~~~~~~~el~ 220 (225)
T 1nnl_A 155 SGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITDFVELL 220 (225)
T ss_dssp TTHHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEESCGGGGC
T ss_pred CCchHHHHHHHHHHcCCCcEEEEeCcHHhHHHHHhCCeEEEecCccccHHHHhcCCeeecCHHHHH
Confidence 23577777777665 4478999999999999999999988884322 2234566899988876543
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.29 E-value=9.5e-07 Score=85.34 Aligned_cols=120 Identities=13% Similarity=0.068 Sum_probs=86.0
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCcccccc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCN 397 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~ 397 (658)
.+.+++.++++.++ +|++++++|+.....+......+|+...-+.++..
T Consensus 107 ~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~~~f~~~~~~------------------------------ 155 (240)
T 3qnm_A 107 GLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVDRYFKKIILS------------------------------ 155 (240)
T ss_dssp CBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEG------------------------------
T ss_pred CcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChHhhceeEEEe------------------------------
Confidence 57789999999999 99999999999888888887777764321111000
Q ss_pred ccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHH
Q 041225 398 SKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKA 477 (658)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~ 477 (658)
+....+..|.
T Consensus 156 ----------------------------------------------------------------------~~~~~~kp~~ 165 (240)
T 3qnm_A 156 ----------------------------------------------------------------------EDLGVLKPRP 165 (240)
T ss_dssp ----------------------------------------------------------------------GGTTCCTTSH
T ss_pred ----------------------------------------------------------------------ccCCCCCCCH
Confidence 0001223456
Q ss_pred HHHHHHHhc---CCCeEEEEcCCc-CChhhhhhcceeEEecCccc-hhhhhhcccccccccchHHH
Q 041225 478 GIVDLIKSR---TDDMTLAIGDGA-NDVSMIQMADVGVGICGQEG-RQAVMASDFAMGQFRFLKRL 538 (658)
Q Consensus 478 ~~v~~L~~~---~~~~v~aiGDg~-NDi~Ml~~A~vgIam~~~~~-~~~k~~AD~vl~~~~~l~~l 538 (658)
.+++.+.++ +++++++|||+. ||++|.+.||++++|.+... ...+..+|+++.++.-+..+
T Consensus 166 ~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~d~vi~sl~e~~~~ 231 (240)
T 3qnm_A 166 EIFHFALSATQSELRESLMIGDSWEADITGAHGVGMHQAFYNVTERTVFPFQPTYHIHSLKELMNL 231 (240)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCCCCCSSCCSEEESSTHHHHHH
T ss_pred HHHHHHHHHcCCCcccEEEECCCchHhHHHHHHcCCeEEEEcCCCCCCcCCCCceEECCHHHHHHH
Confidence 666666665 578999999995 99999999999998844333 14567899999988766544
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.26 E-value=3.5e-07 Score=86.66 Aligned_cols=62 Identities=16% Similarity=0.079 Sum_probs=44.8
Q ss_pred ccH--HHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecC--c-cchhhhhhcccccccccchH
Q 041225 474 LQK--AGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICG--Q-EGRQAVMASDFAMGQFRFLK 536 (658)
Q Consensus 474 ~~K--~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~--~-~~~~~k~~AD~vl~~~~~l~ 536 (658)
..| ..+++.+.+. +++++++|||+.||++|.+.||+++++.+ . .....+. ||+++.++.-+.
T Consensus 136 ~~KP~~~~~~~~~~~~~~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~-a~~~~~~~~el~ 205 (209)
T 2hdo_A 136 KRKPDPLPLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQK-VAHRFQKPLDIL 205 (209)
T ss_dssp CCTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSC-CSEEESSGGGGG
T ss_pred CCCCCcHHHHHHHHHcCCCcccEEEECCChhhHHHHHHcCCeEEEEcCCCCChhhhcc-CCEEeCCHHHHH
Confidence 345 5555555544 56889999999999999999999998732 2 2333455 999988776553
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=98.26 E-value=2.4e-06 Score=79.64 Aligned_cols=61 Identities=16% Similarity=0.248 Sum_probs=48.1
Q ss_pred HHHhhhccceeeecc-------ccc----cccCCChHHHHHHHHhcCCeEEEEecCCh---hHHHHHHHHcCccC
Q 041225 299 TAALIECDLTLLGAT-------GIE----DKLQDGVPEAIEALRQAGIKVWVLTGDKQ---DTAISIALSCKLLT 359 (658)
Q Consensus 299 ~~~~~d~DgTllg~~-------~~~----d~l~~~~~~aI~~l~~~GI~v~i~TGr~~---~~a~~ia~~~gl~~ 359 (658)
..+++|+||||+... ..+ -++.|++.++++.|+++|++++++|+.+. ..+..+.+.+|+..
T Consensus 4 k~vifD~DgtL~~~~~~~y~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~ 78 (189)
T 3ib6_A 4 THVIWDMGETLNTVPNTRYDHHPLDTYPEVVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIID 78 (189)
T ss_dssp CEEEECTBTTTBCCCTTSSCSSCGGGCTTCCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGG
T ss_pred eEEEEcCCCceeeccchhhhhHHHhccCCceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchh
Confidence 346789999996521 111 26789999999999999999999999876 77888888888743
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.25 E-value=9.1e-07 Score=86.20 Aligned_cols=41 Identities=24% Similarity=0.287 Sum_probs=37.1
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
++.+++.+.++.|+++|++++++|+.....+..+.+.+|+.
T Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~ 154 (243)
T 2hsz_A 114 RLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGID 154 (243)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCG
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCch
Confidence 57789999999999999999999999998888888888873
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=98.24 E-value=2.2e-06 Score=82.51 Aligned_cols=41 Identities=20% Similarity=0.282 Sum_probs=37.1
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
.+.+++.+.++.|+++|++++++|+.....+..+.+.+|+.
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~ 143 (231)
T 3kzx_A 103 MLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLT 143 (231)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCG
T ss_pred eECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCch
Confidence 57899999999999999999999999988888888888764
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.24 E-value=4.3e-07 Score=88.78 Aligned_cols=62 Identities=16% Similarity=0.172 Sum_probs=46.7
Q ss_pred HHHHHHHHHhc---CC--CeEEEEcCCcCChhhhhhccee---EEecCccchhhhhhcccccccccchHHH
Q 041225 476 KAGIVDLIKSR---TD--DMTLAIGDGANDVSMIQMADVG---VGICGQEGRQAVMASDFAMGQFRFLKRL 538 (658)
Q Consensus 476 K~~~v~~L~~~---~~--~~v~aiGDg~NDi~Ml~~A~vg---Iam~~~~~~~~k~~AD~vl~~~~~l~~l 538 (658)
|..+++.+.++ ++ +++++|||+.||++|.+.||++ |++ ++.....+..||+++.++.-+...
T Consensus 173 ~~~~~~~~~~~lgi~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~-~~~~~~~~~~ad~v~~sl~el~~~ 242 (250)
T 3l5k_A 173 DPDIFLACAKRFSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPD-GNLSRDLTTKATLVLNSLQDFQPE 242 (250)
T ss_dssp STHHHHHHHHTSSSCCCGGGEEEEESSHHHHHHHHHTTCEEEECCC-TTSCGGGSTTSSEECSCGGGCCGG
T ss_pred ChHHHHHHHHHcCCCCCcceEEEEeCCHHHHHHHHHcCCEEEEEcC-CCCchhhcccccEeecCHHHhhHH
Confidence 44556666655 44 8999999999999999999954 444 444455788999999988766444
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=98.23 E-value=1.2e-06 Score=85.06 Aligned_cols=64 Identities=6% Similarity=-0.035 Sum_probs=44.3
Q ss_pred cHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeE-EecC-ccc-hh-hhhhcccccccccchHHH
Q 041225 475 QKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGV-GICG-QEG-RQ-AVMASDFAMGQFRFLKRL 538 (658)
Q Consensus 475 ~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgI-am~~-~~~-~~-~k~~AD~vl~~~~~l~~l 538 (658)
.|..+++.+.++ +++++++|||+.||++|.+.||+++ ++.. ... .. .+..||+++.++.-+..+
T Consensus 166 p~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~~~~~el~~~ 236 (247)
T 3dv9_A 166 PNPEPYLMALKKGGFKPNEALVIENAPLGVQAGVAAGIFTIAVNTGPLHDNVLLNEGANLLFHSMPDFNKN 236 (247)
T ss_dssp TSSHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTSEEEEECCSSSCHHHHHTTTCSEEESSHHHHHHH
T ss_pred CCCHHHHHHHHHcCCChhheEEEeCCHHHHHHHHHCCCeEEEEcCCCCCHHHHHhcCCCEEECCHHHHHHH
Confidence 344556666555 5688999999999999999999764 4522 221 11 124799999988766544
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=98.23 E-value=2e-06 Score=82.49 Aligned_cols=41 Identities=24% Similarity=0.298 Sum_probs=37.0
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
++.|++.++++.|+++|++++++|+.....+..+.+.+|+.
T Consensus 83 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~ 123 (222)
T 2nyv_A 83 KPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLS 123 (222)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCG
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCH
Confidence 67899999999999999999999999988888888888863
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=98.23 E-value=1.3e-06 Score=84.84 Aligned_cols=63 Identities=10% Similarity=0.035 Sum_probs=44.0
Q ss_pred cHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeE-EecCccchhh----hhhcccccccccchHHH
Q 041225 475 QKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGV-GICGQEGRQA----VMASDFAMGQFRFLKRL 538 (658)
Q Consensus 475 ~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgI-am~~~~~~~~----k~~AD~vl~~~~~l~~l 538 (658)
.|..+++.+.++ +++++++|||+.||+.|.+.||+++ ++ +++.... +..||+++.++.-+..+
T Consensus 167 p~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v-~~~~~~~~~l~~~~ad~v~~s~~el~~~ 237 (243)
T 3qxg_A 167 PNPEPYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAV-NTGPLDGQVLLDAGADLLFPSMQTLCDS 237 (243)
T ss_dssp TSSHHHHHHHHHTTCCGGGEEEEECSHHHHHHHHHTTCEEEEE-CCSSSCHHHHHHTTCSEEESCHHHHHHH
T ss_pred CChHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCEEEEE-eCCCCCHHHHHhcCCCEEECCHHHHHHH
Confidence 344555555554 5689999999999999999999965 44 3322112 23699999888766544
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=98.22 E-value=1.1e-06 Score=91.01 Aligned_cols=40 Identities=15% Similarity=0.267 Sum_probs=38.2
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKL 357 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl 357 (658)
++.|+.++.|+.|+++|++++|+||.....+.++|.++|+
T Consensus 221 r~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~ 260 (385)
T 4gxt_A 221 RTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNN 260 (385)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTS
T ss_pred eeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCc
Confidence 4789999999999999999999999999999999999986
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.20 E-value=1.8e-06 Score=83.16 Aligned_cols=41 Identities=22% Similarity=0.234 Sum_probs=36.2
Q ss_pred ccCCChHHHHHHHHhc-CCeEEEEecCChhHHHHHHHHcCcc
Q 041225 318 KLQDGVPEAIEALRQA-GIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~-GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
.+.+++.+.++.|+++ |++++++|+.....+......+|+.
T Consensus 93 ~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~ 134 (234)
T 2hcf_A 93 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGID 134 (234)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCS
T ss_pred CcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCch
Confidence 5679999999999999 9999999999988888888777764
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.20 E-value=2.8e-06 Score=80.64 Aligned_cols=115 Identities=13% Similarity=0.125 Sum_probs=83.0
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCcccccc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCN 397 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~ 397 (658)
++.|++.+.++.|++ |+++.++|+.+...+..+.+.+|+...-+
T Consensus 84 ~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~~~f~----------------------------------- 127 (210)
T 2ah5_A 84 QLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIHHFFD----------------------------------- 127 (210)
T ss_dssp EECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCGGGCS-----------------------------------
T ss_pred CCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCchhhee-----------------------------------
Confidence 567899999999999 99999999998888888888887743211
Q ss_pred ccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHH
Q 041225 398 SKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKA 477 (658)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~ 477 (658)
.++.....+..|.
T Consensus 128 -------------------------------------------------------------------~i~~~~~~~Kp~p 140 (210)
T 2ah5_A 128 -------------------------------------------------------------------GIYGSSPEAPHKA 140 (210)
T ss_dssp -------------------------------------------------------------------EEEEECSSCCSHH
T ss_pred -------------------------------------------------------------------eeecCCCCCCCCh
Confidence 1111113345677
Q ss_pred HHHHHHHhc---CCCeEEEEcCCcCChhhhhhcce---eEEecCcc-chhhh-hhcccccccccchH
Q 041225 478 GIVDLIKSR---TDDMTLAIGDGANDVSMIQMADV---GVGICGQE-GRQAV-MASDFAMGQFRFLK 536 (658)
Q Consensus 478 ~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~v---gIam~~~~-~~~~k-~~AD~vl~~~~~l~ 536 (658)
.+++.+.++ +++++++|||+.||+.|.+.||+ +|++ ++. ....+ ..+|+++.++.-+.
T Consensus 141 ~~~~~~~~~lg~~p~~~~~vgDs~~Di~~a~~aG~~~i~v~~-~~~~~~~l~~~~a~~v~~~~~el~ 206 (210)
T 2ah5_A 141 DVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITW-GFGEQADLLNYQPDYIAHKPLEVL 206 (210)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESS-SSSCHHHHHTTCCSEEESSTTHHH
T ss_pred HHHHHHHHHcCCCcccEEEECCCHHHHHHHHHCCCcEEEEcC-CCCCHHHHHhCCCCEEECCHHHHH
Confidence 777777665 56889999999999999999998 4555 333 22333 35899988776543
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=98.20 E-value=2.3e-06 Score=82.96 Aligned_cols=41 Identities=22% Similarity=0.256 Sum_probs=37.0
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
.+.|++.+.++.|+++|++++++|+.....+..+.+.+|+.
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~ 145 (240)
T 2no4_A 105 SAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLD 145 (240)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCG
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcH
Confidence 57799999999999999999999999988888888888874
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=98.17 E-value=1.1e-06 Score=86.22 Aligned_cols=40 Identities=20% Similarity=0.236 Sum_probs=36.3
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKL 357 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl 357 (658)
.+.+++.+.++.|+++|++++++|+.....+..+.+.+|+
T Consensus 110 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l 149 (259)
T 4eek_A 110 TAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGL 149 (259)
T ss_dssp EECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTC
T ss_pred CcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcCh
Confidence 6788999999999999999999999998888888888776
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=98.17 E-value=1.3e-06 Score=84.14 Aligned_cols=41 Identities=17% Similarity=0.333 Sum_probs=36.7
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
.+.|++.+.++.|+++|++++++|+.+...+..+.+.+|+.
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~ 135 (232)
T 1zrn_A 95 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLR 135 (232)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCG
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChH
Confidence 57799999999999999999999999988888888888764
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=98.16 E-value=9.7e-07 Score=86.26 Aligned_cols=67 Identities=7% Similarity=-0.017 Sum_probs=50.8
Q ss_pred cccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCc-------cchhh--hhhcccccccccchHHHH
Q 041225 473 PLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQ-------EGRQA--VMASDFAMGQFRFLKRLL 539 (658)
Q Consensus 473 ~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~-------~~~~~--k~~AD~vl~~~~~l~~l~ 539 (658)
+..|..+++.+.++ +++++++|||+.||++|.+.||++++|.+. ....+ +..||+++.++.-+..++
T Consensus 172 ~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~l~~~~~ad~v~~~l~el~~~l 250 (254)
T 3umc_A 172 YKPDPQVYLGACRLLDLPPQEVMLCAAHNYDLKAARALGLKTAFIARPLEYGPGQSQDLAAEQDWDLIASDLLDLHRQL 250 (254)
T ss_dssp CTTSHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSSSSCSSCCSEEESSHHHHHHHH
T ss_pred CCCCHHHHHHHHHHcCCChHHEEEEcCchHhHHHHHHCCCeEEEEecCCccCCCCCcccccCCCCcEEECCHHHHHHHh
Confidence 44567777777766 578999999999999999999999988441 11123 678999999887665553
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.16 E-value=1.4e-06 Score=83.60 Aligned_cols=65 Identities=14% Similarity=0.198 Sum_probs=48.6
Q ss_pred ccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhccee-EEecCccc------hhhhhh-cccccccccchHHH
Q 041225 474 LQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVG-VGICGQEG------RQAVMA-SDFAMGQFRFLKRL 538 (658)
Q Consensus 474 ~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vg-Iam~~~~~------~~~k~~-AD~vl~~~~~l~~l 538 (658)
..|+.+++.+.++ +++++++|||+.||++|++.||++ |++.+... ..+++. ||+++.+..-+..+
T Consensus 143 kpk~~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~l~~~~ad~v~~~~~el~~~ 218 (229)
T 2fdr_A 143 KPKPDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQDLPAV 218 (229)
T ss_dssp TTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEESCGGGHHHH
T ss_pred CcCHHHHHHHHHHcCCChhHeEEEcCCHHHHHHHHHCCCEEEEEecCCccchhhhHHHhhcCCceeecCHHHHHHH
Confidence 4567777777765 568999999999999999999998 56633222 136666 99999887765443
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=98.16 E-value=9.9e-06 Score=77.99 Aligned_cols=121 Identities=17% Similarity=0.185 Sum_probs=84.9
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCcccccc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCN 397 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~ 397 (658)
.+.+++.++++.|+++ ++++++|+.....+......+|+...-+.++...
T Consensus 103 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~----------------------------- 152 (238)
T 3ed5_A 103 QLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLFPFFKDIFVSE----------------------------- 152 (238)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCGGGCSEEEEGG-----------------------------
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChHhhhheEEEec-----------------------------
Confidence 5778999999999999 9999999999888888888877643211110000
Q ss_pred ccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHH
Q 041225 398 SKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKA 477 (658)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~ 477 (658)
....+..|.
T Consensus 153 -----------------------------------------------------------------------~~~~~kp~~ 161 (238)
T 3ed5_A 153 -----------------------------------------------------------------------DTGFQKPMK 161 (238)
T ss_dssp -----------------------------------------------------------------------GTTSCTTCH
T ss_pred -----------------------------------------------------------------------ccCCCCCCh
Confidence 001122345
Q ss_pred HHHHHHHhc----CCCeEEEEcCCc-CChhhhhhcceeE-Ee-cCccchhhhhhcccccccccchHHHH
Q 041225 478 GIVDLIKSR----TDDMTLAIGDGA-NDVSMIQMADVGV-GI-CGQEGRQAVMASDFAMGQFRFLKRLL 539 (658)
Q Consensus 478 ~~v~~L~~~----~~~~v~aiGDg~-NDi~Ml~~A~vgI-am-~~~~~~~~k~~AD~vl~~~~~l~~l~ 539 (658)
.+++.+.++ +++++++|||+. ||++|.+.||++. .+ .++.....+..||+++.++.-+..++
T Consensus 162 ~~~~~~~~~~g~~~~~~~i~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~ad~v~~~~~el~~~l 230 (238)
T 3ed5_A 162 EYFNYVFERIPQFSAEHTLIIGDSLTADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEIRKLEELYHIL 230 (238)
T ss_dssp HHHHHHHHTSTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCTTCCCCSEEESSGGGHHHHH
T ss_pred HHHHHHHHHcCCCChhHeEEECCCcHHHHHHHHHCCCEEEEECCCCCCCcccCCCCeEECCHHHHHHHH
Confidence 556655554 357899999998 9999999999965 44 22224446778999999988776664
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.15 E-value=9e-06 Score=78.78 Aligned_cols=41 Identities=15% Similarity=0.178 Sum_probs=36.1
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
.+.+++.+.++.|+++|++++++|+.....+..+...+|+.
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~ 134 (241)
T 2hoq_A 94 REVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELD 134 (241)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCG
T ss_pred CCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcH
Confidence 46789999999999999999999999888888888887763
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=98.13 E-value=1.1e-06 Score=85.95 Aligned_cols=60 Identities=15% Similarity=0.221 Sum_probs=46.2
Q ss_pred HHHhhhccceeeecccc----------------------ccccCCChHHHHHHHHhcCCeEEEEecCChhH---HHHHHH
Q 041225 299 TAALIECDLTLLGATGI----------------------EDKLQDGVPEAIEALRQAGIKVWVLTGDKQDT---AISIAL 353 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~----------------------~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~---a~~ia~ 353 (658)
..+++|+||||+..... ..++.|++.++|+.|+++|++++++|||+... +.....
T Consensus 60 kavifDlDGTLld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~ 139 (258)
T 2i33_A 60 PAIVLDLDETVLDNSPHQAMSVKTGKGYPYKWDDWINKAEAEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLE 139 (258)
T ss_dssp EEEEECSBTTTEECHHHHHHHHHHSCCTTTTHHHHHHHCCCEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHH
T ss_pred CEEEEeCcccCcCCHHHHHHHHhcccchHHHHHHHHHcCCCCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHH
Confidence 35789999999986300 14788999999999999999999999999543 444455
Q ss_pred HcCcc
Q 041225 354 SCKLL 358 (658)
Q Consensus 354 ~~gl~ 358 (658)
.+|+.
T Consensus 140 ~~Gl~ 144 (258)
T 2i33_A 140 RVGAP 144 (258)
T ss_dssp HHTCS
T ss_pred HcCCC
Confidence 66663
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=98.12 E-value=2.7e-06 Score=82.60 Aligned_cols=40 Identities=18% Similarity=0.244 Sum_probs=34.9
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKL 357 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl 357 (658)
++.|++.+.++.|+++|+++.++|+.+...+..+.+.+|+
T Consensus 110 ~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l 149 (240)
T 2hi0_A 110 GPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFP 149 (240)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHST
T ss_pred CcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC
Confidence 4668999999999999999999999888777777777775
|
| >1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A* | Back alignment and structure |
|---|
Probab=98.11 E-value=1.3e-05 Score=71.23 Aligned_cols=109 Identities=17% Similarity=0.256 Sum_probs=74.5
Q ss_pred eecCChhHHHHHHHHHHc-CcEEEEEcCCeEEEEeCCcEEEEEEEEeeCCCCCCCeeEEEEEcCCCcEEEEEeCCchHhH
Q 041225 153 YQGESPDEQALVSAASAY-GYTLFERTSGHIVIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADSSMF 231 (658)
Q Consensus 153 ~~~~~p~e~al~~~a~~~-g~~~~~~~~~~~~~~~~g~~~~~~il~~~~F~s~rk~msviv~~~~~~~~l~~KGa~e~i~ 231 (658)
..+.||+.+|++++|+.. |+.+..... . .....+|++..++..|.+ +| ..+.+|++..|.
T Consensus 47 ~~SeHPla~AIv~~A~~~~~l~~~~~~~---------~-----~~~~~~F~a~~G~~Gv~v---~G--~~v~vGn~~~i~ 107 (156)
T 1svj_A 47 LADETPEGRSIVILAKQRFNLRERDVQS---------L-----HATFVPFTAQSRMSGINI---DN--RMIRKGSVDAIR 107 (156)
T ss_dssp SSCCSHHHHHHHHHHHHHTTCCCCCHHH---------H-----TCEEEEEETTTTEEEEEE---TT--EEEEEEEHHHHH
T ss_pred CcCCCHHHHHHHHHHHHhcCCCcccccc---------c-----ccceeeccccCCCCeEEE---CC--EEEEEeCcHHHH
Confidence 345799999999999986 654311000 0 001346777777667644 34 457899998877
Q ss_pred HhhhcCccccHHHHHHHHHHHHHHhhcCCeEEEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeee
Q 041225 232 NILAKDSKRNDLIRHITQSHLSEYSSQGLRTLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLG 311 (658)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg 311 (658)
.++...... ....+...++.++.+|.+++.+| .|+.++|
T Consensus 108 ~l~~~~gi~---~~~~~~~~~~~la~~G~T~v~VA--------------------------------------~d~~l~G 146 (156)
T 1svj_A 108 RHVEANGGH---FPTDVDQKVDQVARQGATPLVVV--------------------------------------EGSRVLG 146 (156)
T ss_dssp HHHHHHTCC---CCHHHHHHHHHHHHTTCEEEEEE--------------------------------------ETTEEEE
T ss_pred HHHHHcCCC---CcHHHHHHHHHHHhCCCCEEEEE--------------------------------------ECCEEEE
Confidence 776532111 11235677888999999999998 3689999
Q ss_pred ccccccccCC
Q 041225 312 ATGIEDKLQD 321 (658)
Q Consensus 312 ~~~~~d~l~~ 321 (658)
.+++.|+++|
T Consensus 147 vIalaD~iK~ 156 (156)
T 1svj_A 147 VIALKDIVKG 156 (156)
T ss_dssp EEEEEECCCC
T ss_pred EEEEecCCCC
Confidence 9999999986
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=98.05 E-value=2.8e-06 Score=82.75 Aligned_cols=66 Identities=6% Similarity=-0.055 Sum_probs=49.5
Q ss_pred cHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccc-------hh--hhhhcccccccccchHHHHh
Q 041225 475 QKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEG-------RQ--AVMASDFAMGQFRFLKRLLL 540 (658)
Q Consensus 475 ~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~-------~~--~k~~AD~vl~~~~~l~~l~l 540 (658)
.|..+++.+.++ +++++++|||+.||+.|.+.||++++|.+... .. .+..+|+++.++.-+..++.
T Consensus 170 p~~~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~~~~el~~~l~ 247 (254)
T 3umg_A 170 PDPQAYLRTAQVLGLHPGEVMLAAAHNGDLEAAHATGLATAFILRPVEHGPHQTDDLAPTGSWDISATDITDLAAQLR 247 (254)
T ss_dssp TSHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSCSSCSSCCSEEESSHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCChHHEEEEeCChHhHHHHHHCCCEEEEEecCCcCCCCccccccccCCCceEECCHHHHHHHhc
Confidence 345666666665 56899999999999999999999998844211 11 25778999999887766643
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=98.05 E-value=5.1e-06 Score=81.27 Aligned_cols=39 Identities=13% Similarity=0.159 Sum_probs=34.7
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
++.+++.+.++.|+ |++++++|+.+...+..+...+|+.
T Consensus 93 ~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~ 131 (253)
T 1qq5_A 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLT 131 (253)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCG
T ss_pred CCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCch
Confidence 57799999999999 9999999999998888888888764
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.04 E-value=7.6e-06 Score=76.68 Aligned_cols=52 Identities=21% Similarity=0.277 Sum_probs=41.4
Q ss_pred HHHhhhccceeeecccc-----------ccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHH
Q 041225 299 TAALIECDLTLLGATGI-----------EDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISI 351 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~-----------~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~i 351 (658)
..+++|+||||+.. +. .-++-|++.++|+.|+++|+++.++||.....+..+
T Consensus 7 kav~fDlDGTL~d~-~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~ 69 (196)
T 2oda_A 7 PALLFGLSGCLVDF-GAQAATSDTPDDEHAQLTPGAQNALKALRDQGMPCAWIDELPEALSTPL 69 (196)
T ss_dssp SCEEEETBTTTBCT-TSTTTSCSSCCGGGGSBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHH
T ss_pred CEEEEcCCCceEec-cccccchhhcccccCCcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHh
Confidence 35689999999873 21 125679999999999999999999999987766443
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=98.02 E-value=1e-06 Score=77.12 Aligned_cols=54 Identities=15% Similarity=0.149 Sum_probs=44.9
Q ss_pred HhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 301 ALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 301 ~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
+++|+||||.+ ..++.|++.+++++|+++|++++++|+++...+..+.+.+|+.
T Consensus 5 i~~D~DgtL~~----~~~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~ 58 (137)
T 2pr7_A 5 LIVDYAGVLDG----TDEDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETN 58 (137)
T ss_dssp EEECSTTTTSS----CHHHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHT
T ss_pred EEEeccceecC----CCccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChH
Confidence 46899999943 3457789999999999999999999999988877777776653
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=98.02 E-value=1.2e-06 Score=76.48 Aligned_cols=60 Identities=15% Similarity=0.049 Sum_probs=46.1
Q ss_pred HHHhhhccceeeeccc-cccccCCChHHHHHHHHhcCCeEEEEecCC---hhHHHHHHHHcCcc
Q 041225 299 TAALIECDLTLLGATG-IEDKLQDGVPEAIEALRQAGIKVWVLTGDK---QDTAISIALSCKLL 358 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~-~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~---~~~a~~ia~~~gl~ 358 (658)
.++++|+||||+..-. --.+..+.+.++|++|+++|++++++|||+ ...+...+.+.|+.
T Consensus 4 k~i~~DlDGTL~~~~~~~i~~~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~ 67 (142)
T 2obb_A 4 MTIAVDFDGTIVEHRYPRIGEEIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLE 67 (142)
T ss_dssp CEEEECCBTTTBCSCTTSCCCBCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCC
T ss_pred eEEEEECcCCCCCCCCccccccCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCC
Confidence 4568999999998421 001345799999999999999999999998 45566667777763
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.00 E-value=7.5e-06 Score=81.28 Aligned_cols=40 Identities=23% Similarity=0.019 Sum_probs=34.7
Q ss_pred ccCCChHHHHHHHHhc-CCeEEEEecCChhHHHHHHHHcCc
Q 041225 318 KLQDGVPEAIEALRQA-GIKVWVLTGDKQDTAISIALSCKL 357 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~-GI~v~i~TGr~~~~a~~ia~~~gl 357 (658)
.+.+++.+.++.|++. |++++++|+.....+.......|+
T Consensus 114 ~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l 154 (275)
T 2qlt_A 114 IEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKI 154 (275)
T ss_dssp EECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTC
T ss_pred CcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCC
Confidence 4678999999999999 999999999988887777777665
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=98.00 E-value=5e-06 Score=77.13 Aligned_cols=51 Identities=16% Similarity=0.107 Sum_probs=36.0
Q ss_pred cHHHHHHHHHhc-CCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhcc
Q 041225 475 QKAGIVDLIKSR-TDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASD 526 (658)
Q Consensus 475 ~K~~~v~~L~~~-~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD 526 (658)
.|..+++.+.++ +..++++|||+.||++|.+.||+++++-+. +...++..+
T Consensus 138 p~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~-~~~~~~~l~ 189 (190)
T 2fi1_A 138 PNPESMLYLREKYQISSGLVIGDRPIDIEAGQAAGLDTHLFTS-IVNLRQVLD 189 (190)
T ss_dssp TSCHHHHHHHHHTTCSSEEEEESSHHHHHHHHHTTCEEEECSC-HHHHHHHHT
T ss_pred CCHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCeEEEECC-CCChhhccC
Confidence 345566666655 222899999999999999999999887343 333555443
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=98.00 E-value=7.6e-06 Score=80.64 Aligned_cols=64 Identities=14% Similarity=0.195 Sum_probs=49.5
Q ss_pred HHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHH----cCccCCCccEEEE
Q 041225 300 AALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALS----CKLLTPDMQQIII 367 (658)
Q Consensus 300 ~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~----~gl~~~~~~~i~~ 367 (658)
.+++|+||||+.. +..+ +++.++++.++++|++++++|||...+...++.. +|+......++..
T Consensus 7 ~v~fDlDGTL~~~---~~~~-~~~~~~l~~l~~~g~~~~~~t~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~ 74 (264)
T 1yv9_A 7 GYLIDLDGTIYLG---KEPI-PAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRLANEFDIHVPASLVYTA 74 (264)
T ss_dssp EEEECCBTTTEET---TEEC-HHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHHHHHSCCCCCGGGEEEH
T ss_pred EEEEeCCCeEEeC---CEEC-cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHhcCCCCChhhEEcH
Confidence 4679999999985 3345 6889999999999999999999998777666654 7775444445543
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=97.97 E-value=9.2e-06 Score=76.26 Aligned_cols=39 Identities=13% Similarity=0.160 Sum_probs=34.2
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
++.|++.+ ++.|+++ ++++++|+.+...+..+...+|+.
T Consensus 74 ~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~ 112 (201)
T 2w43_A 74 KAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERNGLL 112 (201)
T ss_dssp EECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCG
T ss_pred ccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcH
Confidence 56788889 9999999 999999999988888888888864
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=97.96 E-value=2.2e-05 Score=75.84 Aligned_cols=65 Identities=12% Similarity=0.183 Sum_probs=47.4
Q ss_pred CcccHHHHHHHHHhcCCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhh--cccccccccchHHH
Q 041225 472 APLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMA--SDFAMGQFRFLKRL 538 (658)
Q Consensus 472 ~~~~K~~~v~~L~~~~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~--AD~vl~~~~~l~~l 538 (658)
.+..|..+++.+.- +++++++|||+.+|++|.+.||+.++..+ ....+... +|+++.++.-+..+
T Consensus 148 ~~~~K~~~~~~~~~-~~~~~~~vGDs~~Di~~a~~aG~~~~~~~-~~~~~~~~~~~~~~~~~~~el~~~ 214 (236)
T 2fea_A 148 CGCCKPSVIHELSE-PNQYIIMIGDSVTDVEAAKLSDLCFARDY-LLNECREQNLNHLPYQDFYEIRKE 214 (236)
T ss_dssp CSSCHHHHHHHHCC-TTCEEEEEECCGGGHHHHHTCSEEEECHH-HHHHHHHTTCCEECCSSHHHHHHH
T ss_pred cCCcHHHHHHHHhc-cCCeEEEEeCChHHHHHHHhCCeeeechH-HHHHHHHCCCCeeecCCHHHHHHH
Confidence 36689888888764 36899999999999999999999987522 22223333 78888777655443
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=97.88 E-value=9.2e-05 Score=72.00 Aligned_cols=39 Identities=23% Similarity=0.180 Sum_probs=33.5
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKL 357 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl 357 (658)
.+.+++.+.++.|+ +|++++++|+.....+......+|+
T Consensus 112 ~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l 150 (251)
T 2pke_A 112 EVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGL 150 (251)
T ss_dssp CBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSG
T ss_pred CcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCc
Confidence 56799999999999 9999999999988777777766665
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.87 E-value=1.5e-05 Score=78.38 Aligned_cols=52 Identities=10% Similarity=0.022 Sum_probs=40.4
Q ss_pred CCCeEEEEcCCc-CChhhhhhcceeEEecCccchhhh------hhcccccccccchHHHH
Q 041225 487 TDDMTLAIGDGA-NDVSMIQMADVGVGICGQEGRQAV------MASDFAMGQFRFLKRLL 539 (658)
Q Consensus 487 ~~~~v~aiGDg~-NDi~Ml~~A~vgIam~~~~~~~~k------~~AD~vl~~~~~l~~l~ 539 (658)
+++++++|||+. ||+.|.+.||+++++.+... ..+ ..||+++.++.-+..++
T Consensus 177 ~~~~~~~vGD~~~~Di~~a~~aG~~~i~~~~~~-~~~~~~~~~~~ad~v~~~l~el~~~l 235 (263)
T 3k1z_A 177 EPVVAAHVGDNYLCDYQGPRAVGMHSFLVVGPQ-ALDPVVRDSVPKEHILPSLAHLLPAL 235 (263)
T ss_dssp CGGGEEEEESCHHHHTHHHHTTTCEEEEECCSS-CCCHHHHHHSCGGGEESSGGGHHHHH
T ss_pred CHHHEEEECCCcHHHHHHHHHCCCEEEEEcCCC-CCchhhcccCCCceEeCCHHHHHHHH
Confidence 568999999997 99999999999998833332 122 26899999988776654
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=97.83 E-value=7.4e-06 Score=78.87 Aligned_cols=52 Identities=10% Similarity=-0.002 Sum_probs=40.5
Q ss_pred CCCeEEEEcCCc-CChhhhhhcceeEEecCcc----------chhhhhhcccccccccchHHH
Q 041225 487 TDDMTLAIGDGA-NDVSMIQMADVGVGICGQE----------GRQAVMASDFAMGQFRFLKRL 538 (658)
Q Consensus 487 ~~~~v~aiGDg~-NDi~Ml~~A~vgIam~~~~----------~~~~k~~AD~vl~~~~~l~~l 538 (658)
+++++++|||+. ||+.|.+.||++++|-+.. ....+..||+++.++.-+..+
T Consensus 171 ~~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~~~~~~g~g~~~~~~~~~~ad~v~~~~~el~~~ 233 (240)
T 3smv_A 171 EKKDILHTAESLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRMPNVDFRFNSMGEMAEA 233 (240)
T ss_dssp CGGGEEEEESCTTTTHHHHHHHTCEEEEECTTCC-------CCCSSCCCCSEEESSHHHHHHH
T ss_pred CchhEEEECCCchhhhHHHHHcCCeEEEEcCCCcccCCCCCCCCcCCCCCCEEeCCHHHHHHH
Confidence 578999999996 9999999999999883322 122457899999887765544
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.78 E-value=0.00014 Score=71.39 Aligned_cols=65 Identities=22% Similarity=0.190 Sum_probs=49.7
Q ss_pred HhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHH---cCccCCCccEEEEcC
Q 041225 301 ALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALS---CKLLTPDMQQIIING 369 (658)
Q Consensus 301 ~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~---~gl~~~~~~~i~~~g 369 (658)
+++|+||||+.. ...+ +++.++|++++++|++++++|||+..+...+++. +|+....+.++..++
T Consensus 4 i~~D~DGtL~~~---~~~~-~~~~~~l~~l~~~g~~~~~~T~r~~~~~~~~~~~l~~lg~~~~~~~i~~~~~ 71 (263)
T 1zjj_A 4 IIFDMDGVLYRG---NRAI-PGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKLLKMGIDVSSSIIITSGL 71 (263)
T ss_dssp EEEECBTTTEET---TEEC-TTHHHHHHHHHHHTCCEEEEESCCSSCHHHHHHHHHTTTCCCCGGGEEEHHH
T ss_pred EEEeCcCceEeC---CEeC-ccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCChhhEEecHH
Confidence 468999999974 3344 8999999999999999999999998777766655 576444445555443
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=97.77 E-value=2.4e-05 Score=75.56 Aligned_cols=59 Identities=12% Similarity=0.205 Sum_probs=46.2
Q ss_pred HHhhhccceeeecccc-----------------------ccccCCChHHHHHHHHhcCCeEEEEecCChh----HHHHHH
Q 041225 300 AALIECDLTLLGATGI-----------------------EDKLQDGVPEAIEALRQAGIKVWVLTGDKQD----TAISIA 352 (658)
Q Consensus 300 ~~~~d~DgTllg~~~~-----------------------~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~----~a~~ia 352 (658)
++.+|+|||++..... ..++-|++.+.++.|+++|++++++|||+.. .+..-.
T Consensus 60 avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~wv~~g~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L 139 (260)
T 3pct_A 60 AVVVDLDETMIDNSAYAGWQVQSGQGFSPKTWTKWVDARQSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDM 139 (260)
T ss_dssp EEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHHHHTTCCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHH
T ss_pred EEEEECCccCcCChhHHHhhcccCCCCCHHHHHHHHHcCCCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHH
Confidence 5789999999976411 1356689999999999999999999999764 555666
Q ss_pred HHcCcc
Q 041225 353 LSCKLL 358 (658)
Q Consensus 353 ~~~gl~ 358 (658)
+.+|+.
T Consensus 140 ~~lGi~ 145 (260)
T 3pct_A 140 KRLGFT 145 (260)
T ss_dssp HHHTCC
T ss_pred HHcCcC
Confidence 677774
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=97.68 E-value=2.6e-05 Score=75.47 Aligned_cols=59 Identities=17% Similarity=0.153 Sum_probs=45.5
Q ss_pred HHhhhccceeeeccc-----------c------------ccccCCChHHHHHHHHhcCCeEEEEecCChh----HHHHHH
Q 041225 300 AALIECDLTLLGATG-----------I------------EDKLQDGVPEAIEALRQAGIKVWVLTGDKQD----TAISIA 352 (658)
Q Consensus 300 ~~~~d~DgTllg~~~-----------~------------~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~----~a~~ia 352 (658)
++.+|+|||++.... + ..++-|++.+.++.|+++|++++++|||+.. .+..-.
T Consensus 60 avVfDIDgTlldn~~y~~~~~~~~~~f~~~~w~~wv~~~~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L 139 (262)
T 3ocu_A 60 AVVADLNETMLDNSPYAGWQVQNNKPFDGKDWTRWVDARQSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDM 139 (262)
T ss_dssp EEEECCBTTTEECHHHHHHHHHHTCCCCHHHHHHHHHHTCCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHH
T ss_pred EEEEECCCcCCCCchhhhhhccccccCCHHHHHHHHHcCCCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHH
Confidence 567899999997641 1 2346689999999999999999999999764 455556
Q ss_pred HHcCcc
Q 041225 353 LSCKLL 358 (658)
Q Consensus 353 ~~~gl~ 358 (658)
+.+|+.
T Consensus 140 ~~lGi~ 145 (262)
T 3ocu_A 140 KRLGFN 145 (262)
T ss_dssp HHHTCS
T ss_pred HHcCcC
Confidence 667764
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=97.61 E-value=2.5e-05 Score=71.73 Aligned_cols=58 Identities=22% Similarity=0.283 Sum_probs=44.0
Q ss_pred HHhhhccceeeeccc--c------ccccCCChHHHHHHHHhcCCeEEEEecC---------------ChhHHHHHHHHcC
Q 041225 300 AALIECDLTLLGATG--I------EDKLQDGVPEAIEALRQAGIKVWVLTGD---------------KQDTAISIALSCK 356 (658)
Q Consensus 300 ~~~~d~DgTllg~~~--~------~d~l~~~~~~aI~~l~~~GI~v~i~TGr---------------~~~~a~~ia~~~g 356 (658)
.+++|.||||+.... + .-++.|++.++|+.|+++|++++++|+. ....+..+.+.+|
T Consensus 16 ~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g 95 (176)
T 2fpr_A 16 YLFIDRDGTLISEPPSDFQVDRFDKLAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQG 95 (176)
T ss_dssp EEEECSBTTTBCCC--CCCCCSGGGCCBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTT
T ss_pred EEEEeCCCCeEcCCCCCcCcCCHHHCcCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcC
Confidence 346899999986521 1 2357799999999999999999999998 3455566666666
Q ss_pred c
Q 041225 357 L 357 (658)
Q Consensus 357 l 357 (658)
+
T Consensus 96 l 96 (176)
T 2fpr_A 96 V 96 (176)
T ss_dssp C
T ss_pred C
Confidence 5
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=97.61 E-value=1.8e-05 Score=74.70 Aligned_cols=36 Identities=11% Similarity=0.160 Sum_probs=30.0
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHH
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALS 354 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~ 354 (658)
.+.|++.++++.|++ |++++++|+.....+..+...
T Consensus 89 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~ 124 (211)
T 2i6x_A 89 EISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSP 124 (211)
T ss_dssp EECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTST
T ss_pred ccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhh
Confidence 466889999999999 999999999887776666554
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=97.59 E-value=7.6e-05 Score=71.30 Aligned_cols=65 Identities=15% Similarity=0.125 Sum_probs=46.9
Q ss_pred cHHHHHHHHHhc---CCCeEEEEcCCc-CChhhhhhcceeEEecCc--cchhhhhhcccccccccchHHHH
Q 041225 475 QKAGIVDLIKSR---TDDMTLAIGDGA-NDVSMIQMADVGVGICGQ--EGRQAVMASDFAMGQFRFLKRLL 539 (658)
Q Consensus 475 ~K~~~v~~L~~~---~~~~v~aiGDg~-NDi~Ml~~A~vgIam~~~--~~~~~k~~AD~vl~~~~~l~~l~ 539 (658)
.|..+++.+.++ +++++++|||+. ||+.|.+.||+++++-.. ........+|+++.++.-+..++
T Consensus 156 p~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~l~el~~~l 226 (230)
T 3vay_A 156 PDPAPFLEALRRAKVDASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDADRLPDAEIHNLSQLPEVL 226 (230)
T ss_dssp TSHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCCSSSCCSEEESSGGGHHHHH
T ss_pred cCHHHHHHHHHHhCCCchheEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcccCCCCeeECCHHHHHHHH
Confidence 345666666655 578999999997 999999999999866222 21112567899999887766553
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=97.41 E-value=7.8e-05 Score=69.61 Aligned_cols=40 Identities=15% Similarity=0.062 Sum_probs=34.9
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
.+.|++.+.++.|+++| +++++|+.+...+..+...+|+.
T Consensus 86 ~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~ 125 (200)
T 3cnh_A 86 QPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLG 125 (200)
T ss_dssp CBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGG
T ss_pred ccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHH
Confidence 46788999999999999 99999999988888888777763
|
| >1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18 | Back alignment and structure |
|---|
Probab=97.40 E-value=3.4e-05 Score=66.39 Aligned_cols=47 Identities=21% Similarity=0.187 Sum_probs=38.2
Q ss_pred Hhhhccceeeecccc---ccccCCChHHHHHHHHhcCCeEEEEecCChhH
Q 041225 301 ALIECDLTLLGATGI---EDKLQDGVPEAIEALRQAGIKVWVLTGDKQDT 347 (658)
Q Consensus 301 ~~~d~DgTllg~~~~---~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~ 347 (658)
+++|+||||++...- +..+.+.+.+++++++++|++++++|||+...
T Consensus 4 i~~DlDGTL~~~~~~~~~~~~~~~~~~~~l~~l~~~Gi~~~iaTGR~~~~ 53 (126)
T 1xpj_A 4 LIVDLDGTLTQANTSDYRNVLPRLDVIEQLREYHQLGFEIVISTARNMRT 53 (126)
T ss_dssp EEECSTTTTBCCCCSCGGGCCBCHHHHHHHHHHHHTTCEEEEEECTTTTT
T ss_pred EEEecCCCCCCCCCCccccCCCCHHHHHHHHHHHhCCCeEEEEeCCChhh
Confidence 578999999975220 01466889999999999999999999998765
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=97.26 E-value=0.00067 Score=66.39 Aligned_cols=40 Identities=23% Similarity=0.358 Sum_probs=34.9
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
++.|++.++++.|++ |++++++|+.+...+..+...+|+.
T Consensus 121 ~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~ 160 (260)
T 2gfh_A 121 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQ 160 (260)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCG
T ss_pred CCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcCHH
Confidence 577899999999998 5999999999988888888888874
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=97.20 E-value=0.00015 Score=69.44 Aligned_cols=35 Identities=11% Similarity=0.089 Sum_probs=29.8
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHH
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIAL 353 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~ 353 (658)
++.|++.++++.|+++ ++++++|+.....+..+..
T Consensus 112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~ 146 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCK 146 (229)
T ss_dssp CCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHH
T ss_pred hccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHh
Confidence 4668899999999999 9999999998887776653
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=97.18 E-value=3.3e-05 Score=72.51 Aligned_cols=30 Identities=27% Similarity=0.351 Sum_probs=26.1
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhH
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDT 347 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~ 347 (658)
.+.|++.+.++.|+++|++++++|+.+...
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~ 120 (206)
T 2b0c_A 91 ALRPEVIAIMHKLREQGHRVVVLSNTNRLH 120 (206)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCT
T ss_pred ccCccHHHHHHHHHHCCCeEEEEECCChHH
Confidence 567899999999999999999999976544
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=97.06 E-value=0.0016 Score=61.40 Aligned_cols=42 Identities=29% Similarity=0.265 Sum_probs=38.1
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccC
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLT 359 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~ 359 (658)
++.|++.++++.|+++|+++.++|+.+...+....+.+|+..
T Consensus 84 ~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~ 125 (216)
T 3kbb_A 84 KENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEK 125 (216)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGG
T ss_pred ccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCc
Confidence 567899999999999999999999999999999998888754
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=96.95 E-value=6.5e-05 Score=71.17 Aligned_cols=28 Identities=14% Similarity=0.280 Sum_probs=24.3
Q ss_pred CCChHHHHHHHHhcCCeEEEEecCChhH
Q 041225 320 QDGVPEAIEALRQAGIKVWVLTGDKQDT 347 (658)
Q Consensus 320 ~~~~~~aI~~l~~~GI~v~i~TGr~~~~ 347 (658)
.+++.+.++.|+++|++++++||++...
T Consensus 90 ~~~~~e~l~~L~~~G~~l~ivTn~~~~~ 117 (211)
T 2b82_A 90 KEVARQLIDMHVRRGDAIFFVTGRSPTK 117 (211)
T ss_dssp CHHHHHHHHHHHHHTCEEEEEECSCCCS
T ss_pred cHHHHHHHHHHHHCCCEEEEEcCCcHHH
Confidence 4578899999999999999999997643
|
| >2kmv_A Copper-transporting ATPase 1; menkes, nucleotide binding protein, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} PDB: 2kmx_A* | Back alignment and structure |
|---|
Probab=96.89 E-value=0.0019 Score=59.25 Aligned_cols=44 Identities=16% Similarity=0.068 Sum_probs=29.3
Q ss_pred eeeecCChhHHHHHHHHHHc-CcE-EEEEcCCeEEEEeCCcEEEEEEEE
Q 041225 151 IDYQGESPDEQALVSAASAY-GYT-LFERTSGHIVIDINGEGLRLDVLG 197 (658)
Q Consensus 151 ~~~~~~~p~e~al~~~a~~~-g~~-~~~~~~~~~~~~~~g~~~~~~il~ 197 (658)
++..+.||+..|++++++.. +.. +.. -.-+..+.|.+.+..+-.
T Consensus 34 ~E~~SeHPlA~AIv~~a~~~~~~~~~~~---~~~f~~i~G~Gv~~~V~g 79 (185)
T 2kmv_A 34 AESNSEHPLGTAITKYCKQELDTETLGT---CIDFQVVPGCGISCKVTN 79 (185)
T ss_dssp GGGSSSCHHHHHHHHHHHHHHTCSCCCC---CBCCEEETTTEEEEEECC
T ss_pred HHccCCCHHHHHHHHHHHhhcCCCCCCC---ccceEEeccceEEEEECC
Confidence 45567899999999999764 432 111 112457888988887643
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=96.60 E-value=0.0012 Score=63.12 Aligned_cols=39 Identities=15% Similarity=0.141 Sum_probs=35.4
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKL 357 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl 357 (658)
++.|++.++++.|+++| +++++|+.+...+..+.+.+|+
T Consensus 96 ~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl 134 (231)
T 2p11_A 96 RVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGL 134 (231)
T ss_dssp GBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTH
T ss_pred CcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCc
Confidence 68899999999999999 9999999998888888888776
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=96.57 E-value=0.002 Score=62.43 Aligned_cols=47 Identities=17% Similarity=0.295 Sum_probs=36.6
Q ss_pred CCCeEEEEcCCcCChhhhhhcce-eEEecCccchhhhhhcccccccccchH
Q 041225 487 TDDMTLAIGDGANDVSMIQMADV-GVGICGQEGRQAVMASDFAMGQFRFLK 536 (658)
Q Consensus 487 ~~~~v~aiGDg~NDi~Ml~~A~v-gIam~~~~~~~~k~~AD~vl~~~~~l~ 536 (658)
.++++++|||+.+|+.+=+.||+ .|++. +.. -...||+++.++.-+.
T Consensus 186 ~p~e~l~VGDs~~Di~aA~~aG~~~i~v~-~~~--~~~~ad~vi~~l~eL~ 233 (250)
T 4gib_A 186 NPQNCIGIEDASAGIDAINSANMFSVGVG-NYE--NLKKANLVVDSTNQLK 233 (250)
T ss_dssp CGGGEEEEESSHHHHHHHHHTTCEEEEES-CTT--TTTTSSEEESSGGGCC
T ss_pred ChHHeEEECCCHHHHHHHHHcCCEEEEEC-Chh--HhccCCEEECChHhCC
Confidence 46899999999999999999997 46773 332 2346899998887653
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=96.57 E-value=0.00095 Score=66.87 Aligned_cols=47 Identities=23% Similarity=0.299 Sum_probs=36.0
Q ss_pred Hhhhccceeeecccc---------ccccCCChHHHHHHHHhcCCeEEEEecCChhH
Q 041225 301 ALIECDLTLLGATGI---------EDKLQDGVPEAIEALRQAGIKVWVLTGDKQDT 347 (658)
Q Consensus 301 ~~~d~DgTllg~~~~---------~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~ 347 (658)
+.+|.|||+.....- +.++.|++.++++.|+++|++++++||++...
T Consensus 162 i~iD~dgtl~~~~~~~~~~~~~~~~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~ 217 (301)
T 1ltq_A 162 VIFDVDGTLAKMNGRGPYDLEKCDTDVINPMVVELSKMYALMGYQIVVVSGRESGT 217 (301)
T ss_dssp EEEETBTTTBCCSSCCTTCGGGGGGCCBCHHHHHHHHHHHHTTCEEEEEECSCCCC
T ss_pred EEEeCCCCcccccCCCchhhhhccccCCChHHHHHHHHHHHCCCeEEEEeCCCccc
Confidence 347888887654331 12357899999999999999999999998643
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=96.55 E-value=0.0015 Score=65.89 Aligned_cols=39 Identities=21% Similarity=0.378 Sum_probs=35.9
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcC
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCK 356 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~g 356 (658)
.+.++.++.++.++++|+.++|+||-...-+.++|...+
T Consensus 143 ~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~~ 181 (327)
T 4as2_A 143 RVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADPR 181 (327)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCGG
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhcc
Confidence 577899999999999999999999999999999998753
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=96.34 E-value=0.0041 Score=65.24 Aligned_cols=45 Identities=24% Similarity=0.363 Sum_probs=36.2
Q ss_pred HHhhhccceeeeccc-------ccc--ccCCChHHHHHHHHhcCCeEEEEecCC
Q 041225 300 AALIECDLTLLGATG-------IED--KLQDGVPEAIEALRQAGIKVWVLTGDK 344 (658)
Q Consensus 300 ~~~~d~DgTllg~~~-------~~d--~l~~~~~~aI~~l~~~GI~v~i~TGr~ 344 (658)
++++|+||||+.... ..+ .+-|++.++|+.|+++|++++++|+.+
T Consensus 60 ~v~fD~DGTL~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~G~~l~IvTN~~ 113 (416)
T 3zvl_A 60 VAAFDLDGTLITTRSGKVFPTSPSDWRILYPEIPKKLQELAAEGYKLVIFTNQM 113 (416)
T ss_dssp EEEECSBTTTEECSSCSSSCSSTTCCEESCTTHHHHHHHHHHTTCEEEEEEECH
T ss_pred EEEEeCCCCccccCCCccCCCCHHHhhhhcccHHHHHHHHHHCCCeEEEEeCCc
Confidence 467899999987531 001 267999999999999999999999965
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=96.14 E-value=0.012 Score=55.50 Aligned_cols=40 Identities=20% Similarity=0.239 Sum_probs=33.9
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
++.|++.++++.|+++|++++++|+... .+..+...+|+.
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~ 134 (220)
T 2zg6_A 95 FLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLK 134 (220)
T ss_dssp EECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCG
T ss_pred eECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcH
Confidence 5789999999999999999999999865 466777777763
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=96.12 E-value=0.0072 Score=62.25 Aligned_cols=43 Identities=21% Similarity=0.213 Sum_probs=38.3
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCC
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTP 360 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~ 360 (658)
++.|++.++++.|+++|++++++|+.+...+..+...+|+...
T Consensus 215 ~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~~ 257 (384)
T 1qyi_A 215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPY 257 (384)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGG
T ss_pred CcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChHh
Confidence 4567999999999999999999999999999988888888544
|
| >2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=96.02 E-value=0.006 Score=60.29 Aligned_cols=64 Identities=13% Similarity=0.155 Sum_probs=51.5
Q ss_pred HHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEec---CChhHHHHHHHHcCcc-CCCccEEE
Q 041225 299 TAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTG---DKQDTAISIALSCKLL-TPDMQQII 366 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TG---r~~~~a~~ia~~~gl~-~~~~~~i~ 366 (658)
..+++|+||||+.. +.+.+++.++|++++++|++++++|| |.........+.+|+. .....++.
T Consensus 15 k~i~~D~DGtL~~~----~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~r~~~~~~~~l~~lg~~~~~~~~ii~ 82 (284)
T 2hx1_A 15 KCIFFDAFGVLKTY----NGLLPGIENTFDYLKAQGQDYYIVTNDASRSPEQLADSYHKLGLFSITADKIIS 82 (284)
T ss_dssp SEEEECSBTTTEET----TEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCTTCCGGGEEE
T ss_pred CEEEEcCcCCcCcC----CeeChhHHHHHHHHHHCCCEEEEEeCCCCcCHHHHHHHHHHCCcCCCCHhhEEc
Confidence 45689999999984 34668999999999999999999995 7788888888888885 44344443
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=95.59 E-value=0.023 Score=55.33 Aligned_cols=37 Identities=19% Similarity=0.302 Sum_probs=32.4
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHH
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALS 354 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~ 354 (658)
.+.|++.++++.|+++|++++++|+.+...+..+.+.
T Consensus 130 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~ 166 (261)
T 1yns_A 130 EFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGH 166 (261)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHT
T ss_pred ccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHh
Confidence 6789999999999999999999999988777766553
|
| >2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.82 E-value=0.0047 Score=57.22 Aligned_cols=59 Identities=17% Similarity=0.061 Sum_probs=49.0
Q ss_pred HHHhhhccceeeecccc--------------------ccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 299 TAALIECDLTLLGATGI--------------------EDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~--------------------~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
....+|+|+||+....- .-.++|++.+.++.+++. ++++++|.-....|..+...+++.
T Consensus 29 ~~LVLDLD~TLvhs~~~~~~~~d~~~~~~~~g~~~~~~v~~RPgv~efL~~l~~~-~~i~I~Tss~~~~a~~vl~~ld~~ 107 (195)
T 2hhl_A 29 KCVVIDLDETLVHSSFKPISNADFIVPVEIDGTIHQVYVLKRPHVDEFLQRMGQL-FECVLFTASLAKYADPVADLLDRW 107 (195)
T ss_dssp CEEEECCBTTTEEEESSCCTTCSEEEEEEETTEEEEEEEEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCCS
T ss_pred eEEEEccccceEcccccCCCCccceeeeecCCceeeEEEEeCcCHHHHHHHHHcC-CeEEEEcCCCHHHHHHHHHHhCCc
Confidence 34568999999987321 124689999999999998 999999999999999999988863
|
| >2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A | Back alignment and structure |
|---|
Probab=94.19 E-value=0.016 Score=52.97 Aligned_cols=59 Identities=15% Similarity=0.041 Sum_probs=49.0
Q ss_pred HHHhhhccceeeecccc--------------------ccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 299 TAALIECDLTLLGATGI--------------------EDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~--------------------~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
....+|+|+||+....- .-.++|++.+.++.+.+. +.+++.|.-....|..+...++..
T Consensus 16 ~~LVLDLD~TLvhs~~~~~~~~d~~~~~~~~~~~~~~~v~~rPg~~efL~~l~~~-~~i~I~T~~~~~~a~~vl~~ld~~ 94 (181)
T 2ght_A 16 ICVVINLDETLVHSSFKPVNNADFIIPVEIDGVVHQVYVLKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVADLLDKW 94 (181)
T ss_dssp CEEEECCBTTTEEEESSCCSSCSEEEEEEETTEEEEEEEEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCTT
T ss_pred eEEEECCCCCeECCcccCCCCccceeeeeeCCeeEEEEEEeCCCHHHHHHHHHhC-CCEEEEcCCCHHHHHHHHHHHCCC
Confidence 34568999999986421 124799999999999998 999999999999999999988763
|
| >3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A* | Back alignment and structure |
|---|
Probab=93.85 E-value=0.058 Score=54.83 Aligned_cols=56 Identities=20% Similarity=0.166 Sum_probs=43.1
Q ss_pred HHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCCh----hHHHHHHHHcCccC
Q 041225 300 AALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQ----DTAISIALSCKLLT 359 (658)
Q Consensus 300 ~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~----~~a~~ia~~~gl~~ 359 (658)
..++|+||||... +.+-|++.++|+.|+++|++++++|+.+. ..+..+.+.+|+-.
T Consensus 15 ~~l~D~DGvl~~g----~~~~p~a~~~l~~l~~~g~~~~~vTNn~~~~~~~~~~~l~~~lgi~~ 74 (352)
T 3kc2_A 15 AFAFDIDGVLFRG----KKPIAGASDALKLLNRNKIPYILLTNGGGFSERARTEFISSKLDVDV 74 (352)
T ss_dssp EEEECCBTTTEET----TEECTTHHHHHHHHHHTTCCEEEECSCCSSCHHHHHHHHHHHHTSCC
T ss_pred EEEEECCCeeEcC----CeeCcCHHHHHHHHHHCCCEEEEEeCCCCCCchHHHHHHHHhcCCCC
Confidence 4679999999974 34568999999999999999999997653 33444555678743
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=92.36 E-value=0.076 Score=50.84 Aligned_cols=40 Identities=20% Similarity=0.198 Sum_probs=32.4
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccC
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLT 359 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~ 359 (658)
.+.|++.+.++.|+++|+++.++|++.. +..+...+|+..
T Consensus 95 ~~~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l~~~gl~~ 134 (243)
T 4g9b_A 95 AVLPGIRSLLADLRAQQISVGLASVSLN--APTILAALELRE 134 (243)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCCTT--HHHHHHHTTCGG
T ss_pred cccccHHHHHHhhhcccccceecccccc--hhhhhhhhhhcc
Confidence 5789999999999999999999998754 455667777643
|
| >2arf_A Wilson disease ATPase; P-type ATPase,ATP7B, copper transport, nucleotide binding, ATP binding, hydrolase; NMR {Homo sapiens} PDB: 2koy_A | Back alignment and structure |
|---|
Probab=91.39 E-value=0.57 Score=41.68 Aligned_cols=45 Identities=16% Similarity=0.106 Sum_probs=29.9
Q ss_pred eeeecCChhHHHHHHHHHHc-CcEEEEEcCCeEEEEeCCcEEEEEEEE
Q 041225 151 IDYQGESPDEQALVSAASAY-GYTLFERTSGHIVIDINGEGLRLDVLG 197 (658)
Q Consensus 151 ~~~~~~~p~e~al~~~a~~~-g~~~~~~~~~~~~~~~~g~~~~~~il~ 197 (658)
++..|.||+.+|++++++.. +.... ..-.-+..+.|.+.+.++-.
T Consensus 32 lE~~SeHPlA~AIv~~a~~~~~~~~~--~~~~~f~~i~G~Gv~a~v~g 77 (165)
T 2arf_A 32 AEASSEHPLGVAVTKYCKEELGTETL--GYCTDFQAVPGCGIGCKVSN 77 (165)
T ss_dssp HHTTSCSTTHHHHHHHHHHHHTCCCC--CCEEEEEEETTTEEEEEEEC
T ss_pred HHccCCChHHHHHHHHHHHhcCCCCC--CCcCceEEecCccEEEEEcC
Confidence 44567799999999999765 43200 01122567899998887754
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=91.36 E-value=0.15 Score=54.98 Aligned_cols=26 Identities=27% Similarity=0.358 Sum_probs=24.2
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecC
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGD 343 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr 343 (658)
.+.+++.++|+.|+++|++++++|+.
T Consensus 100 ~~~~~~~~~L~~L~~~g~~~~i~Tn~ 125 (555)
T 3i28_A 100 KINRPMLQAALMLRKKGFTTAILTNT 125 (555)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CcChhHHHHHHHHHHCCCEEEEEeCC
Confidence 57789999999999999999999996
|
| >2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 | Back alignment and structure |
|---|
Probab=86.10 E-value=0.68 Score=44.50 Aligned_cols=34 Identities=6% Similarity=0.031 Sum_probs=27.1
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSC 355 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~ 355 (658)
++.|++.+++++ |+++.++|..+...+..+....
T Consensus 125 ~~~pgv~e~L~~----g~~l~i~Tn~~~~~~~~~l~~~ 158 (253)
T 2g80_A 125 PVYADAIDFIKR----KKRVFIYSSGSVKAQKLLFGYV 158 (253)
T ss_dssp CCCHHHHHHHHH----CSCEEEECSSCHHHHHHHHHSB
T ss_pred CCCCCHHHHHHc----CCEEEEEeCCCHHHHHHHHHhh
Confidence 566777777776 9999999999988777776654
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=81.43 E-value=0.054 Score=54.75 Aligned_cols=38 Identities=0% Similarity=-0.147 Sum_probs=32.4
Q ss_pred HHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCCh
Q 041225 299 TAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQ 345 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~ 345 (658)
.++++|+||||++.-. . +++.+++..|+.++++|||+.
T Consensus 22 kli~fDlDGTLld~~~----~-----~~l~~~~~~g~~~~~~tGR~~ 59 (332)
T 1y8a_A 22 HMFFTDWEGPWILTDF----A-----LELCMAVFNNARFFSNLSEYD 59 (332)
T ss_dssp CEEEECSBTTTBCCCH----H-----HHHHHHHHCCHHHHHHHHHHH
T ss_pred eEEEEECcCCCcCccH----H-----HHHHHHHHCCCEEEEEcCCCc
Confidence 4678999999998632 1 789999999999999999987
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 658 | ||||
| d1wpga3 | 239 | d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryc | 5e-19 | |
| d1q3ia_ | 214 | d.220.1.1 (A:) Sodium/potassium-transporting ATPas | 1e-15 | |
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 5e-13 | |
| d1wpga2 | 168 | c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, ca | 7e-11 | |
| d2b8ea1 | 135 | c.108.1.7 (A:416-434,A:548-663) Cation-transportin | 1e-08 | |
| d1wzca1 | 243 | c.108.1.10 (A:1-243) Putative mannosyl-3-phosphogl | 2e-08 | |
| d1xvia_ | 232 | c.108.1.10 (A:) Putative mannosyl-3-phosphoglycera | 2e-07 | |
| d1nnla_ | 217 | c.108.1.4 (A:) Phosphoserine phosphatase {Human (H | 2e-06 | |
| d1nrwa_ | 285 | c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillu | 4e-06 | |
| d1rkqa_ | 271 | c.108.1.10 (A:) Hypothetical protein YidA {Escheri | 7e-06 | |
| d1wr8a_ | 230 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 1e-05 | |
| d2b30a1 | 283 | c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmod | 1e-05 | |
| d1s2oa1 | 244 | c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 { | 2e-05 | |
| d1l6ra_ | 225 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 5e-05 | |
| d1rlma_ | 269 | c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Esc | 7e-05 | |
| d2rbka1 | 260 | c.108.1.10 (A:2-261) Sugar-phosphate phosphatase B | 9e-04 | |
| d1nf2a_ | 267 | c.108.1.10 (A:) Hypothetical protein TM0651 {Therm | 0.002 | |
| d1rkua_ | 206 | c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomona | 0.002 |
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 239 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 84.6 bits (208), Expect = 5e-19
Identities = 36/220 (16%), Positives = 55/220 (25%), Gaps = 47/220 (21%)
Query: 114 AAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYT 173
E A CN ++ + + E AL +
Sbjct: 49 GLVELATICALCNDSSLDFNETKG-------------VYEKVGEATETALTTLVEKMNVF 95
Query: 174 LFERTSGHIVIDINGEGLRLD----VLGLHEFDSVRKRMSVVIRFPDNS-----VKVLVK 224
E + V N + EF RK MSV +S K+ VK
Sbjct: 96 NTEVRNLSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVK 155
Query: 225 GADSSMFNILAKDSKRNDLIRHITQSHLSE---------YSSQGLRTLVVASRDLADEEL 275
GA + + +T + LR L +A+RD +
Sbjct: 156 GAPEGVIDRCNYVRV-GTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKRE 214
Query: 276 KQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGI 315
+ E DLT +G G+
Sbjct: 215 EMVLDDSSR---------------FMEYETDLTFVGVVGM 239
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} Length = 214 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Score = 73.7 bits (180), Expect = 1e-15
Identities = 27/210 (12%), Positives = 51/210 (24%), Gaps = 44/210 (20%)
Query: 116 HEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYTLF 175
CN + S D G E AL+ ++
Sbjct: 35 TALSRIAGLCNRAVFKAGQENISVSKR---------DTAG-DASESALLKCIELSCGSVR 84
Query: 176 ERTSGHIVIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPDN--SVKVLVKGADSSMFNI 233
+ + + F+S K + DN S +++KGA + +
Sbjct: 85 KMRDRNPKVAE------------ISFNSTNKYQLSIHEREDNPQSHVLVMKGAPERILDR 132
Query: 234 LAKDSKRNDL------IRHITQSHLSEYSSQGLRTLVVASRDLADEELKQWQHRYEDAST 287
+ + ++ Q+ E G R L +L + + D
Sbjct: 133 CSSILVQGKEIPLDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKFPRGFKFDTD--- 189
Query: 288 SLVDRASKLRQTAALIECDLTLLGATGIED 317
L +G + D
Sbjct: 190 -----------ELNFPTEKLCFVGLMSMID 208
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 69.1 bits (168), Expect = 5e-13
Identities = 25/206 (12%), Positives = 59/206 (28%), Gaps = 38/206 (18%)
Query: 184 IDINGEGLRLDVLGLHE--FDSVRKRMSVVIRFPDNSVKVLVKGADSSMFNILAKDSKRN 241
+++ + + ++ + + V +N L + A + + +
Sbjct: 111 VELKLQNISTNLADCFNLNEQLPLQFLDNVKVGKNNIYAALEEFATTEL--------HVS 162
Query: 242 DLIRHITQSHLSEYSSQGLRTLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAA 301
D + L + + + + S+ D E K +
Sbjct: 163 DATLFSLKGALWTLAQEVYQEWYLGSKLYEDVEKKIAR---------------------- 200
Query: 302 LIECDLTLLGATGIEDKLQ--DGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLT 359
G E L+ D V + L+ AG ++ + TG + + LL
Sbjct: 201 ----TTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLP 256
Query: 360 PDMQQIIINGNSEEECKDLLADAKAR 385
I + E +++ A+
Sbjct: 257 YFEADFIATASDVLEAENMYPQARPL 282
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 59.0 bits (142), Expect = 7e-11
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 301 ALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTP 360
++I D T T D + V +I+ R AGI+V ++TGD + TAI+I +
Sbjct: 3 SVICSDKTGTLTTNQLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGE 62
Query: 361 DMQ 363
+ +
Sbjct: 63 NEE 65
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 135 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 52.0 bits (124), Expect = 1e-08
Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Query: 298 QTAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKL 357
+ + D T G D L++ A++ L++ GIKV ++TG + + A+S +L
Sbjct: 1 EKVTAVIFDKTGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITG--DNWRSAEAISREL 58
Query: 358 LTPDMQQIIINGNSEEECKDL 378
+ ++ EE K L
Sbjct: 59 NLDLVIAEVLPHQKSEEVKKL 79
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 243 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Score = 53.5 bits (127), Expect = 2e-08
Identities = 31/221 (14%), Positives = 57/221 (25%), Gaps = 16/221 (7%)
Query: 302 LIECDL--TLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIA---LSCK 356
LI D+ TL+ D IE L+ G ++ + +
Sbjct: 4 LIFLDIDKTLI-----PGYEPDPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVET 58
Query: 357 LLTPDMQQIIINGNSEEECKDLLADAKAR----YGVKSSNRTKCNSKLKRSAEIEYLAIS 412
+ I + G++ + KL+ ++Y S
Sbjct: 59 PFISENGSAIFIPKGYFPFDVKGKEVGNYIVIELGIRVEKIREELKKLENIYGLKYYGNS 118
Query: 413 NDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVA 472
+ A+ E+ L F + R +
Sbjct: 119 TKEEIEKFTGMPPELVPLAMEREYSETIFEWSRDGWEEVLVEGGFKVTMGSRFYTVHGNS 178
Query: 473 PLQKAGIVDLIKSR--TDDMTLAIGDGANDVSMIQMADVGV 511
KA + L + + A+GD ND M ++ D
Sbjct: 179 DKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVF 219
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} Length = 232 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Score = 50.5 bits (119), Expect = 2e-07
Identities = 30/228 (13%), Positives = 64/228 (28%), Gaps = 21/228 (9%)
Query: 302 LIECDL--TLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLT 359
L+ DL TLL + + LR+A + V + + + + L
Sbjct: 6 LVFSDLDGTLLDS---HSYDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQ--KTLGL 60
Query: 360 PDMQQIIING---------NSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLA 410
+ I NG + +++ N + K + +
Sbjct: 61 QGLPLIAENGAVIQLAEQWQEIDGFPRIISGISHGEISLVLNTLREKEHFKFTTFDDVDD 120
Query: 411 ISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCR 470
+ + ++ + + D + + L R
Sbjct: 121 ATIAEWTGLSRSQAALTQLHEASVTLIWRDSDERMAQFTARLNELGLQFMQGARFWHVLD 180
Query: 471 VAPLQKAGIVDLIK-----SRTDDMTLAIGDGANDVSMIQMADVGVGI 513
+ + +I S TL +GDG ND ++++ D V +
Sbjct: 181 ASAGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYAVIV 228
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 217 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.8 bits (110), Expect = 2e-06
Identities = 18/96 (18%), Positives = 29/96 (30%), Gaps = 1/96 (1%)
Query: 441 GNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGAND 500
+ L+ + + I L + + IGDGA D
Sbjct: 120 NIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATD 179
Query: 501 VSMIQMADVGVGICGQEGRQAVM-ASDFAMGQFRFL 535
+ AD +G G RQ V + + + F L
Sbjct: 180 MEACPPADAFIGFGGNVIRQQVKDNAKWYITDFVEL 215
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Score = 46.5 bits (109), Expect = 4e-06
Identities = 44/253 (17%), Positives = 81/253 (32%), Gaps = 46/253 (18%)
Query: 302 LIECDL--TLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTG------------DKQDT 347
LI DL TLL + ++ A+ ++ GI+V V TG T
Sbjct: 3 LIAIDLDGTLLNSKH---QVSLENENALRQAQRDGIEVVVSTGRAHFDVMSIFEPLGIKT 59
Query: 348 AISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKAR---------------------- 385
+ A + P+ + ++ D+L+ ++
Sbjct: 60 WVISANGAVIHDPEGRLYHHETIDKKRAYDILSWLESENYYYEVFTGSAIYTPQNGRELL 119
Query: 386 ----YGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDG 441
+S+N S LK++AE++Y S + + L
Sbjct: 120 DVELDRFRSANPEADLSVLKQAAEVQYSQSGFAYINSFQELFEADEPIDFYNILGFSFFK 179
Query: 442 NSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGA 498
L ++ ++ L +S K + + + + T A+GD
Sbjct: 180 EKLEAGWKRYEHAEDLTLVSSAEHNFELSSRKASKGQALKRLAKQLNIPLEETAAVGDSL 239
Query: 499 NDVSMIQMADVGV 511
ND SM++ A GV
Sbjct: 240 NDKSMLEAAGKGV 252
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Score = 45.7 bits (107), Expect = 7e-06
Identities = 40/268 (14%), Positives = 86/268 (32%), Gaps = 32/268 (11%)
Query: 302 LIECDL--TLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLT 359
LI D+ TLL + V AI A R G+ V + TG + +
Sbjct: 6 LIAIDMDGTLLLPDH---TISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQ 62
Query: 360 PDMQQIIING-------------------NSEEECKDLLADAKARYGVKSSNRTKCNSKL 400
P I NG + + L + + + ++
Sbjct: 63 PGDYCITYNGALVQKAADGSTVAQTALSYDDYRFLEKLSREVGSHFHALDRTTLYTANRD 122
Query: 401 KRSAEIEYLAISN-DAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDL 459
+ ++ F + + + + + + + + ++++ L
Sbjct: 123 ISYYTVHESFVATIPLVFCEAEKMDPNTQFLKVMMIDEPAILDQAIARIPQEVKEKYTVL 182
Query: 460 ATSCRVVLCC--RVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICG-- 515
++ + RV + + + +AIGD ND++MI+ A VGV +
Sbjct: 183 KSAPYFLEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNAI 242
Query: 516 QEGRQA---VMASDFAMGQFRFLKRLLL 540
++ V S+ G +++ +L
Sbjct: 243 PSVKEVANFVTKSNLEDGVAFAIEKYVL 270
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Score = 45.0 bits (105), Expect = 1e-05
Identities = 29/217 (13%), Positives = 64/217 (29%), Gaps = 36/217 (16%)
Query: 302 LIECDL--TLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLT 359
I D+ T+ + + EAI GI + ++TG+ A + ++
Sbjct: 4 AISIDIDGTITYP---NRMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSG 60
Query: 360 PDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSD 419
P + + + + K L E L +F +
Sbjct: 61 PVVAEDGG----------------------AISYKKKRIFLASMDEEWILWNEIRKRFPN 98
Query: 420 VPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGI 479
+ + + A L+I ++ +++ ++L + V
Sbjct: 99 ARTSYTMPDRRA----GLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKG 154
Query: 480 VDLIKSR-----TDDMTLAIGDGANDVSMIQMADVGV 511
+ K+ +GDG ND+ ++ V
Sbjct: 155 SGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYKV 191
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Score = 45.0 bits (105), Expect = 1e-05
Identities = 32/237 (13%), Positives = 79/237 (33%), Gaps = 29/237 (12%)
Query: 302 LIECDL--TLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLT 359
L+ D TL + K+ +AI+ + G V + TG + +S L
Sbjct: 12 LLLIDFDGTLF--VDKDIKVPSENIDAIKEAIEKGYMVSICTGRSKVGILSAFGEENLKK 69
Query: 360 PD---------MQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKL---------- 400
+ I+ + + + + ++
Sbjct: 70 MNFYGMPGVYINGTIVYDQIGYTLLDETIETDVYAELISYLVEKNLVNQTIFHRGESNYV 129
Query: 401 -KRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYI---LEKDLESDL 456
+ + ++L S + + +++ + + L +++D + + L++ ++ L
Sbjct: 130 TEDNKYADFLQKMYSENRSIIIRHNEMLKYRTMNKLMIVLDPSESKTVIGNLKQKFKNKL 189
Query: 457 FDLATSCRVVLCCRVAPLQKAGIVDLIKSR--TDDMTLAIGDGANDVSMIQMADVGV 511
T ++ + GI L+K ++D L +GD ND++M+
Sbjct: 190 TIFTTYNGHAEVTKLGHDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSF 246
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} Length = 244 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Score = 44.2 bits (103), Expect = 2e-05
Identities = 36/218 (16%), Positives = 66/218 (30%), Gaps = 29/218 (13%)
Query: 302 LIECDL--TLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLT 359
L+ DL T +G + L + R+ + TG +A + L+
Sbjct: 5 LLISDLDNTWVGDQQALEHL-----QEYLGDRRGNFYLAYATGRSYHSARELQKQVGLME 59
Query: 360 PD------MQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISN 413
PD +I ++ D L++ R +++ K + E IS
Sbjct: 60 PDYWLTAVGSEIYHPEGLDQHWADYLSEHWQRDILQAIADGFEALKPQSPLEQNPWKISY 119
Query: 414 DAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAP 473
P D L +++ KD++ +L R
Sbjct: 120 HLDPQACPTVID----QLTEMLKETGIPVQVIFSSGKDVD------------LLPQRSNK 163
Query: 474 LQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGV 511
+ + TL GD ND+ + + + GV
Sbjct: 164 GNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGV 201
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 42.7 bits (99), Expect = 5e-05
Identities = 33/224 (14%), Positives = 60/224 (26%), Gaps = 52/224 (23%)
Query: 302 LIECDL--TLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLT 359
L D+ L + + E+I + + G+ V +L+G+ ++ + +
Sbjct: 5 LAAIDVDGNLTDR---DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGING 61
Query: 360 P----------DMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYL 409
P D I S E L + R ++S +
Sbjct: 62 PVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKRTSMRSILTNRWR------------ 109
Query: 410 AISNDAKFSDVPQGHDVKEVAAIA--SLALIIDGNSLVYILEKDLESDLFDLATSCRVVL 467
+A DV V A +I +++ + + L
Sbjct: 110 ----EASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSL 165
Query: 468 CCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGV 511
D L IGD ND+ M Q+
Sbjct: 166 EY-------------------DEILVIGDSNNDMPMFQLPVRKA 190
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Score = 42.6 bits (99), Expect = 7e-05
Identities = 41/228 (17%), Positives = 79/228 (34%), Gaps = 20/228 (8%)
Query: 302 LIECDL--TLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLT 359
+I D+ T L Q + L++ GIK V +G++ IS K
Sbjct: 4 VIVTDMDGTFLNDAK--TYNQPRFMAQYQELKKRGIKFVVASGNQYYQLISFFPELKDEI 61
Query: 360 PDM-----------QQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEY 408
+ +Q+ + E + ++ + + ++ + +A +
Sbjct: 62 SFVAENGALVYEHGKQLFHGELTRHESRIVIGELLKDKQLNFVACGLQSAYVSENAPEAF 121
Query: 409 LAI--SNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVV 466
+A+ + + V ++ +V SL L + LV + TS
Sbjct: 122 VALMAKHYHRLKPVKDYQEIDDVLFKFSLNLPDEQIPLVIDKLHVALDGIMKPVTSGFGF 181
Query: 467 LCCRVAPLQKAGIVDLIKSRTD---DMTLAIGDGANDVSMIQMADVGV 511
+ + L KA + + R D +AIGD ND M++MA
Sbjct: 182 IDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSF 229
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} Length = 260 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Score = 39.1 bits (90), Expect = 9e-04
Identities = 37/228 (16%), Positives = 77/228 (33%), Gaps = 23/228 (10%)
Query: 302 LIECDL--TLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTG-------------DKQD 346
+ D+ TL+ ++ EA+EA G+K+++ TG D+
Sbjct: 3 ALFFDIDGTLVSFET--HRIPSSTIEALEAAHAKGLKIFIATGRPKAIINNLSELQDRNL 60
Query: 347 TAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEI 406
I ++ + I + +EE K + A + + GV + N + + E+
Sbjct: 61 IDGYITMNGAYCFVGEEVIYKSAIPQEEVKAMAAFCE-KKGVPCIFVEEHNISVCQPNEM 119
Query: 407 EYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVV 466
+ + +P + + + + ++
Sbjct: 120 VKKIFYDFLHVNVIPTVSFEEASNKEVIQMTPFITEEEEKEVLPSIPT--CEIGRWYPAF 177
Query: 467 LCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGV 511
K +D I + T++ GDG ND+SM++ A +GV
Sbjct: 178 ADVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGV 225
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} Length = 267 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Score = 38.0 bits (87), Expect = 0.002
Identities = 41/264 (15%), Positives = 80/264 (30%), Gaps = 29/264 (10%)
Query: 302 LIECDL--TLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTG-------------DKQD 346
+ DL TLL ++ + IE L + V +G K+
Sbjct: 4 VFVFDLDGTLLNDNL---EISEKDRRNIEKLSR-KCYVVFASGRMLVSTLNVEKKYFKRT 59
Query: 347 TAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEI 406
+ P+ I+ E KD++ K + K + EI
Sbjct: 60 FPTIAYNGAIVYLPEEGVILNEKIPPEVAKDIIEYIKPLNVHWQAYIDDVLYSEKDNEEI 119
Query: 407 EYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVV 466
+ A ++ + P ++ L LI L + E E +
Sbjct: 120 KSYARHSNVDYRVEPNLSELVSKMGTTKLLLIDTPERLDELKEILSERFKDVVKVFKSFP 179
Query: 467 LCCRVAPL-----QKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGV--GICGQEGR 519
+ P + + + + + GD ND+ M + A + V ++ +
Sbjct: 180 TYLEIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENAIEKVK 239
Query: 520 QA---VMASDFAMGQFRFLKRLLL 540
+A V ++ G L+R+
Sbjct: 240 EASDIVTLTNNDSGVSYVLERIST 263
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} Length = 206 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Score = 37.5 bits (86), Expect = 0.002
Identities = 14/51 (27%), Positives = 20/51 (39%)
Query: 490 MTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLL 540
+A GD ND +M+ A G+ E A+ + LKR L
Sbjct: 147 RVIAAGDSYNDTTMLSEAHAGILFHAPENVIREFPQFPAVHTYEDLKREFL 197
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 658 | |||
| d1q3ia_ | 214 | Sodium/potassium-transporting ATPase alpha chain { | 99.89 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 99.88 | |
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 99.88 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 99.87 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 99.86 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 99.86 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 99.86 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 99.85 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.85 | |
| d1wpga3 | 239 | Calcium ATPase {Rabbit (Oryctolagus cuniculus) [Ta | 99.83 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 99.83 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.8 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.78 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 99.75 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 99.74 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 99.69 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 99.66 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 99.62 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 99.55 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 99.31 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 99.26 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 99.15 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 98.95 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.53 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 98.36 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 98.18 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 98.06 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 97.98 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 97.93 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 97.89 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 97.75 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 97.74 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 97.67 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 97.57 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 97.56 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 97.5 | |
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 97.42 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 97.4 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 97.19 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 97.02 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 96.88 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 96.82 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 96.74 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 96.55 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 96.35 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 96.32 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 96.29 | |
| d2obba1 | 122 | Hypothetical protein BT0820 {Bacteroides thetaiota | 95.84 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 95.77 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 95.7 | |
| d2a29a1 | 136 | Potassium-transporting ATPase B chain, KdpB {Esche | 95.48 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 94.8 | |
| d1xpja_ | 124 | Hypothetical protein VC0232 {Vibrio cholerae [TaxI | 94.43 | |
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 92.52 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 91.92 | |
| d2b8ea2 | 113 | Cation-transporting ATPase {Archaeon Archaeoglobus | 91.45 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 90.54 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 87.79 | |
| d1yj5a1 | 195 | 5' polynucleotide kinase-3' phosphatase, middle do | 87.73 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 87.27 | |
| d2b0ca1 | 197 | Putative phosphatase YihX {Escherichia coli [TaxId | 87.1 |
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.89 E-value=4.5e-25 Score=209.55 Aligned_cols=175 Identities=14% Similarity=0.087 Sum_probs=122.7
Q ss_pred hHHHHHHHHHHhhccceeecCCCCCCCCCCCCcccCCcceeeecCChhHHHHHHHHHHcCcEEEEEcCCeEEEEeCCcEE
Q 041225 112 RIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYTLFERTSGHIVIDINGEGL 191 (658)
Q Consensus 112 ~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~~~~~~~g~~~ 191 (658)
++....++.++++||++....+.... ....+... ++|+|.||+.++.+.|..... ...
T Consensus 31 ~~~~~~l~~~~~lcn~a~~~~~~~~~---------~~~~~~~~-GdptE~ALl~~a~~~~~~~~~------------~r~ 88 (214)
T d1q3ia_ 31 SPTWTALSRIAGLCNRAVFKAGQENI---------SVSKRDTA-GDASESALLKCIELSCGSVRK------------MRD 88 (214)
T ss_dssp SHHHHHHHHHHHHSCCCCCC-------------------CCCC-SCHHHHHHHHHHHHHHSCHHH------------HHH
T ss_pred CHHHHHHHHHHHHhCCCccccCCCCC---------cccccccc-cChHHHHHHHHHHHhCCCHHH------------HHh
Confidence 44567789999999988765433110 01122334 499999999999987754322 122
Q ss_pred EEEEEEeeCCCCCCCeeEEEEEcCC--CcEEEEEeCCchHhHHhhhcCc------cccHHHHHHHHHHHHHHhhcCCeEE
Q 041225 192 RLDVLGLHEFDSVRKRMSVVIRFPD--NSVKVLVKGADSSMFNILAKDS------KRNDLIRHITQSHLSEYSSQGLRTL 263 (658)
Q Consensus 192 ~~~il~~~~F~s~rk~msviv~~~~--~~~~l~~KGa~e~i~~~~~~~~------~~~~~~~~~~~~~~~~~~~~G~r~l 263 (658)
+++++..+||+|.||||++|++.++ +.+++|+|||||.|+++|+... .+++..++.+.+.++.|+.+|+|||
T Consensus 89 ~~~~v~~~pF~S~rK~ms~v~~~~~~~~~~~~~~KGApe~Il~~C~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~GlRvL 168 (214)
T d1q3ia_ 89 RNPKVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGAPERILDRCSSILVQGKEIPLDKEMQDAFQNAYLELGGLGERVL 168 (214)
T ss_dssp TSCEEEEEC------CEEEEEECSSCTTSEEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHHHTTCEEE
T ss_pred hCcEeeeEeeCCCCCEEEEEEEccCCCCceeEEecCCHHHHHHhhhheeeCCceeechHHHHHHHHHHHHHHhhCCcEEE
Confidence 4567889999999999999999864 5689999999999999998543 2467889999999999999999999
Q ss_pred EEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccccCCC
Q 041225 264 VVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQDG 322 (658)
Q Consensus 264 ~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~l~~~ 322 (658)
++|||.++.++++.+.+. .. ......+.|+||+|.+|+.|++|+.
T Consensus 169 a~A~k~l~~~~~~~~~~~------~~--------~~~~~~e~~L~flGlvgi~DPPR~~ 213 (214)
T d1q3ia_ 169 GFCQLNLPSGKFPRGFKF------DT--------DELNFPTEKLCFVGLMSMIDHHHHH 213 (214)
T ss_dssp EEEEEEECTTTSCTTCCC------CT--------TTTSSCCSSEEEEEEEEEESCCSCC
T ss_pred EEEEEecCcccccccccc------Ch--------hhhhhhcCCCEEEEEEEEEeCCCCC
Confidence 999999988765432110 00 0112356799999999999999864
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=99.88 E-value=3.4e-23 Score=205.56 Aligned_cols=230 Identities=17% Similarity=0.128 Sum_probs=149.6
Q ss_pred HHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcC---------
Q 041225 299 TAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIING--------- 369 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g--------- 369 (658)
+++++|+||||++. +.++++++.++|++|+++|++++++|||++..+..+.+++++..+.+.++..+|
T Consensus 5 Kli~~DlDGTL~~~---~~~i~~~~~~al~~L~~~gi~v~i~TGR~~~~~~~~~~~l~l~~~~~~~i~~nGa~i~~~~~~ 81 (271)
T d1rkqa_ 5 KLIAIDMDGTLLLP---DHTISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCITYNGALVQKAADG 81 (271)
T ss_dssp CEEEECCCCCCSCT---TSCCCHHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCCSTTCEEEEGGGTEEEETTTC
T ss_pred eEEEEeCCccccCC---CCccCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhcCcCCCcEEEEcCceeEeccCCC
Confidence 44789999999986 568999999999999999999999999999999999999988766554544444
Q ss_pred -------CCHHHHHHHHHHHHHhcCcccCcc-ccccccccchhHHHHHH-hhcCCCCCCCCCCCchhhhhccCcEEEEEe
Q 041225 370 -------NSEEECKDLLADAKARYGVKSSNR-TKCNSKLKRSAEIEYLA-ISNDAKFSDVPQGHDVKEVAAIASLALIID 440 (658)
Q Consensus 370 -------~~~~~~~~ii~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 440 (658)
.+.+.++.+............... ................. .....+.. ................+..+
T Consensus 82 ~~i~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 159 (271)
T d1rkqa_ 82 STVAQTALSYDDYRFLEKLSREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLV--FCEAEKMDPNTQFLKVMMID 159 (271)
T ss_dssp CEEEECCBCHHHHHHHHHHHHHHTCEEEEECSSCEEECCSSCCHHHHHHHHHTTCCEE--ECCGGGSCTTCCBCEEEEEC
T ss_pred eEEEeecccHHHHHHHHHHHHhhcceEEEEecceEEeccccchhHHHHHHhhccCccc--cchhhhcCcccceEEEEEec
Confidence 356777777766655421111100 00000000011100000 01110000 00000001111223344455
Q ss_pred CccHHHHHHHhhHHh---hhhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEec
Q 041225 441 GNSLVYILEKDLESD---LFDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGIC 514 (658)
Q Consensus 441 ~~~~~~~~~~~~~~~---~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~ 514 (658)
.+.........+... ...+...++..+++.+.+.+|+.+++.++++ +.+++++||||.||++||+.|++||||
T Consensus 160 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~p~~~~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~~am- 238 (271)
T d1rkqa_ 160 EPAILDQAIARIPQEVKEKYTVLKSAPYFLEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAV- 238 (271)
T ss_dssp CHHHHHHHHHHSCHHHHHHEEEEEEETTEEEEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC-
T ss_pred CHHHHHHHHHHHHHHhhcceEEEEecCceEEecCCCCCcccccceehhhcccchhcEEEEeCcHhHHHHHHhCCcEEEe-
Confidence 444443333333322 2334456677899999999999999999987 667899999999999999999999999
Q ss_pred Cccchhhhhhcccccccccc
Q 041225 515 GQEGRQAVMASDFAMGQFRF 534 (658)
Q Consensus 515 ~~~~~~~k~~AD~vl~~~~~ 534 (658)
+|+.+++|..|++|+.+...
T Consensus 239 ~na~~~lk~~a~~i~~~~~~ 258 (271)
T d1rkqa_ 239 DNAIPSVKEVANFVTKSNLE 258 (271)
T ss_dssp TTSCHHHHHHCSEECCCTTT
T ss_pred CCCCHHHHHhCCEEcCCCCc
Confidence 67778899999999876554
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.88 E-value=5.3e-23 Score=185.49 Aligned_cols=160 Identities=26% Similarity=0.365 Sum_probs=121.0
Q ss_pred hccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHH
Q 041225 304 ECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAK 383 (658)
Q Consensus 304 d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~ 383 (658)
|.+|++.=. .-|++|++++++|+.|+++||++||+|||+..+|..+|+++|+...+.++..
T Consensus 8 d~~~~~~~~--~~Dp~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v~~----------------- 68 (168)
T d1wpga2 8 DKTGTLTTN--QLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVAD----------------- 68 (168)
T ss_dssp CCTTTTBCC--CECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCCTT-----------------
T ss_pred CCccEEEEE--ecCCCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCCCcccccc-----------------
Confidence 556655432 2489999999999999999999999999999999999999999776432100
Q ss_pred HhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccC
Q 041225 384 ARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSC 463 (658)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~ 463 (658)
....+.++......... ....
T Consensus 69 -----------------------------------------------------~~~~~~~~~~~~~~~~~----~~~~-- 89 (168)
T d1wpga2 69 -----------------------------------------------------RAYTGREFDDLPLAEQR----EACR-- 89 (168)
T ss_dssp -----------------------------------------------------TEEEHHHHHHSCHHHHH----HHHH--
T ss_pred -----------------------------------------------------ccccccccchhhHHHHh----hhhh--
Confidence 00111111110011111 1111
Q ss_pred CeeEEEEcCcccHHHHHHHHHhcCCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhcccccccccchHHHHhh-h
Q 041225 464 RVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLLV-H 542 (658)
Q Consensus 464 ~~~i~~~~~~~~K~~~v~~L~~~~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l~-~ 542 (658)
+..++++++|.+|...++.+++. ++.|+++|||.||++||+.||+||+| +++.+.++++||+++.+.++...+.++ +
T Consensus 90 ~~~v~ar~~p~~K~~lv~~l~~~-g~~Va~vGDG~nD~~AL~~AdvGIa~-~~gt~~a~~aAdivl~~~~l~~v~~~I~~ 167 (168)
T d1wpga2 90 RACCFARVEPSHKSKIVEYLQSY-DEITAMTGDGVNDAPALKKAEIGIAM-GSGTAVAKTASEMVLADDNFSTIVAAVEE 167 (168)
T ss_dssp HCCEEESCCHHHHHHHHHHHHHT-TCCEEEEECSGGGHHHHHHSSEEEEE-TTSCHHHHHTCSEEETTCCTHHHHHHHHH
T ss_pred hhhhhhccchhHHHHHHHHHHhc-ccceeEEecCCCCHHHHHhCCEEEEe-ccccHHHHHhCCEEEccCCHHHHHHHHHc
Confidence 14589999999999999999998 68999999999999999999999999 566677999999999999888877665 5
Q ss_pred h
Q 041225 543 G 543 (658)
Q Consensus 543 g 543 (658)
|
T Consensus 168 G 168 (168)
T d1wpga2 168 G 168 (168)
T ss_dssp H
T ss_pred C
Confidence 4
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=99.87 E-value=4.9e-22 Score=198.54 Aligned_cols=230 Identities=17% Similarity=0.131 Sum_probs=150.4
Q ss_pred HHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccC------------CCccEEEE
Q 041225 300 AALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLT------------PDMQQIII 367 (658)
Q Consensus 300 ~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~------------~~~~~i~~ 367 (658)
++++|+||||++. +..+++++.++|++|+++|++++++|||++..+..++..+++.. +++++++.
T Consensus 3 li~~DlDGTLl~~---~~~i~~~~~~~l~~l~~~Gi~~~i~TGR~~~~~~~~~~~l~~~~~~i~~nG~~i~~~~~~~i~~ 79 (285)
T d1nrwa_ 3 LIAIDLDGTLLNS---KHQVSLENENALRQAQRDGIEVVVSTGRAHFDVMSIFEPLGIKTWVISANGAVIHDPEGRLYHH 79 (285)
T ss_dssp EEEEECCCCCSCT---TSCCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHGGGTCCCEEEEGGGTEEECTTCCEEEE
T ss_pred EEEEECCccccCC---CCccCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCcEEEecCceeEEecCCceeee
Confidence 4679999999987 55899999999999999999999999999999999999988632 24567777
Q ss_pred cCCCHHHHHHHHHHHHHhcCc---ccCccccccccccc--hhHHHHH-----------------HhhcCCCCCCCCCCCc
Q 041225 368 NGNSEEECKDLLADAKARYGV---KSSNRTKCNSKLKR--SAEIEYL-----------------AISNDAKFSDVPQGHD 425 (658)
Q Consensus 368 ~g~~~~~~~~ii~~~~~~~~~---~~~~~~~~~~~~~~--~~~~~~~-----------------~~~~~~~~~~~~~~~~ 425 (658)
..++.+.+.++++.+.+.-.. ......+....... ....... ................
T Consensus 80 ~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (285)
T d1nrwa_ 80 ETIDKKRAYDILSWLESENYYYEVFTGSAIYTPQNGRELLDVELDRFRSANPEADLSVLKQAAEVQYSQSGFAYINSFQE 159 (285)
T ss_dssp CCCCHHHHHHHHHHHHHTTCEEEEEESSCEEECCCHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHTCCEEECSCGGG
T ss_pred ccCCHHHHHHHHHHHHHcCCceEEecCceEEeccccHHHHHHHHHhhhhcCcccchhhhhhhhhhhhccccceeechHHH
Confidence 778999999999998875111 11111100000000 0000000 0000011111111111
Q ss_pred hhhhhccC-cEEEEEeCccHHHHHHHhhH----HhhhhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCC
Q 041225 426 VKEVAAIA-SLALIIDGNSLVYILEKDLE----SDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDG 497 (658)
Q Consensus 426 ~~~~~~~~-~~~l~~~~~~~~~~~~~~~~----~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg 497 (658)
........ ...+........ .+..... .....+..+++..+++.+.+.+|+.+++.++++ +.++|++||||
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~s~~~~ldi~~~~~~K~~ai~~l~~~~gi~~~~vi~~GD~ 238 (285)
T d1nrwa_ 160 LFEADEPIDFYNILGFSFFKE-KLEAGWKRYEHAEDLTLVSSAEHNFELSSRKASKGQALKRLAKQLNIPLEETAAVGDS 238 (285)
T ss_dssp GTSSSSCCCEEEEEEECSCHH-HHHHHHHHHTTCTTEEEECSSTTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEESS
T ss_pred HhhcccchhheeeecccchHH-HHHHHHHHhhcCCCeEEEEeCCcEEEEecccchhhhHHHHHHhhcccCcccEEEEeCC
Confidence 11111111 222222232222 2222211 122345667788999999999999999999987 56789999999
Q ss_pred cCChhhhhhcceeEEecCccchhhhhhcccccccccc
Q 041225 498 ANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRF 534 (658)
Q Consensus 498 ~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~ 534 (658)
.||++||+.|++|||| +|+.++++..||+++.+.+-
T Consensus 239 ~ND~~Ml~~a~~svam-~na~~~~k~~A~~v~~~~~~ 274 (285)
T d1nrwa_ 239 LNDKSMLEAAGKGVAM-GNAREDIKSIADAVTLTNDE 274 (285)
T ss_dssp GGGHHHHHHSSEEEEC-TTCCHHHHHHCSEECCCGGG
T ss_pred HHHHHHHHhCCeEEEe-CCCCHHHHHhCCEEcCCCCc
Confidence 9999999999999999 67777899999999876543
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=99.86 E-value=2e-22 Score=199.68 Aligned_cols=227 Identities=17% Similarity=0.192 Sum_probs=143.7
Q ss_pred HHhhhccceeeeccccccccC-CChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccC----CCccEEE-------E
Q 041225 300 AALIECDLTLLGATGIEDKLQ-DGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLT----PDMQQII-------I 367 (658)
Q Consensus 300 ~~~~d~DgTllg~~~~~d~l~-~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~----~~~~~i~-------~ 367 (658)
++++|+||||+.. ...+. +.+.++|++|+++|++++++|||+...+..+.+++++.. .++..+. .
T Consensus 4 li~~DlDGTLl~~---~~~~~~~~~~~~l~~l~~~gi~~~i~TGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~ 80 (269)
T d1rlma_ 4 VIVTDMDGTFLND---AKTYNQPRFMAQYQELKKRGIKFVVASGNQYYQLISFFPELKDEISFVAENGALVYEHGKQLFH 80 (269)
T ss_dssp EEEECCCCCCSCT---TSCCCHHHHHHHHHHHHHHTCEEEEECSSCHHHHGGGCTTTTTTSEEEEGGGTEEEETTEEEEE
T ss_pred EEEEeCCccCcCC---CCcCChHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCcccceEeeceeEEEECCcEEEE
Confidence 4578999999986 33554 689999999999999999999999999988888776532 2333333 3
Q ss_pred cCCCHHHHHHHHHHHHHhcCcccCccccccccccchh-H-HHHHHhhcCCCCCCCCCCCchhhhh-ccCcEEEEEeCccH
Q 041225 368 NGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSA-E-IEYLAISNDAKFSDVPQGHDVKEVA-AIASLALIIDGNSL 444 (658)
Q Consensus 368 ~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~ 444 (658)
.....++....+....+..............+..... . ................ +..... ...++.+.......
T Consensus 81 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 157 (269)
T d1rlma_ 81 GELTRHESRIVIGELLKDKQLNFVACGLQSAYVSENAPEAFVALMAKHYHRLKPVK---DYQEIDDVLFKFSLNLPDEQI 157 (269)
T ss_dssp CCCCHHHHHHHHHHHHTCTTCEEEEEESSCEEEETTSCHHHHHHHHTTCSSEEEES---CGGGCCSCEEEEEEECCGGGH
T ss_pred eccchHHHHHHHHHHHhhcCceEEEEecCceEEecCCcHHHHHHHHhhcccccccc---cHhhhcchheEEEecCCHHHH
Confidence 3346666666666655543332222222222222111 1 1111111111111111 111111 22333333333333
Q ss_pred HHHHHHhhHHhh---hhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccc
Q 041225 445 VYILEKDLESDL---FDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEG 518 (658)
Q Consensus 445 ~~~~~~~~~~~~---~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~ 518 (658)
....+.+.... ...+.++..++++.+++.+|+.+++.|+++ +.++|++||||.||++||+.||+|||| +|+.
T Consensus 158 -~~~~~~~~~~~~~~~~~~~~~~~~~di~p~~~sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam-~Na~ 235 (269)
T d1rlma_ 158 -PLVIDKLHVALDGIMKPVTSGFGFIDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAM-GNAA 235 (269)
T ss_dssp -HHHHHHHHHHTTTSSEEEECSTTEEEEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEEC-TTCC
T ss_pred -HHHHHHHHHHhhcceEEEEEcCceEEEecCchHHHHHHHHHhhhhccccccEEEEcCCcchHHHHHhCCeEEEe-CCCC
Confidence 33333333222 234556678899999999999999999987 667899999999999999999999999 6777
Q ss_pred hhhhhhcccccccccc
Q 041225 519 RQAVMASDFAMGQFRF 534 (658)
Q Consensus 519 ~~~k~~AD~vl~~~~~ 534 (658)
+++|+.|++|+.+.+-
T Consensus 236 ~~lk~~A~~v~~~~~~ 251 (269)
T d1rlma_ 236 ENIKQIARYATDDNNH 251 (269)
T ss_dssp HHHHHHCSEECCCGGG
T ss_pred HHHHHhCCEEcCCCCc
Confidence 7899999999877654
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=99.86 E-value=7.7e-22 Score=195.15 Aligned_cols=231 Identities=18% Similarity=0.140 Sum_probs=153.3
Q ss_pred HHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccC-------------CCccEEE
Q 041225 300 AALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLT-------------PDMQQII 366 (658)
Q Consensus 300 ~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~-------------~~~~~i~ 366 (658)
++++|+||||++. +..++++++++|++++++| +++++|||++..+..+..+.+... +++..+.
T Consensus 4 li~~DlDGTL~~~---~~~i~~~~~~al~~l~~~~-~~~i~TGR~~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~i~ 79 (267)
T d1nf2a_ 4 VFVFDLDGTLLND---NLEISEKDRRNIEKLSRKC-YVVFASGRMLVSTLNVEKKYFKRTFPTIAYNGAIVYLPEEGVIL 79 (267)
T ss_dssp EEEEECCCCCSCT---TSCCCHHHHHHHHHHTTTS-EEEEECSSCHHHHHHHHHHHSSSCCCEEEGGGTEEEETTTEEEE
T ss_pred EEEEeCCccccCC---cCccCHHHHHHHHHHHcCC-EEEEECCCChHHHHHHHHHhcccCCceeccCCeEEEeccccccc
Confidence 3578999999987 5589999999999998755 799999999999998887765421 2344555
Q ss_pred EcCCCHHHHHHHHHHHHHhcCcccCccccccccc-cchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHH
Q 041225 367 INGNSEEECKDLLADAKARYGVKSSNRTKCNSKL-KRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLV 445 (658)
Q Consensus 367 ~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 445 (658)
.+..+.+.+.++++.+.+.. ...........+. ................+........... .......++...++..
T Consensus 80 ~~~i~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~ 157 (267)
T d1nf2a_ 80 NEKIPPEVAKDIIEYIKPLN-VHWQAYIDDVLYSEKDNEEIKSYARHSNVDYRVEPNLSELVS-KMGTTKLLLIDTPERL 157 (267)
T ss_dssp ECCBCHHHHHHHHHHHGGGC-CCEEEECSSCEEESSCCHHHHHHHHHTTCCEEECTTHHHHHH-HHCBSEEEEECCHHHH
T ss_pred ccCCCHHHHHHHHHHHHhcC-ceEEEeeCceEEecCCcHHHHHHHHhcCCCceecCcHHHHhh-hccceEEEEeccHHHH
Confidence 56678899999988877642 1111111111111 1122222222222222211111111111 1122333444444444
Q ss_pred HHHHHhhHHhh---hhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccch
Q 041225 446 YILEKDLESDL---FDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGR 519 (658)
Q Consensus 446 ~~~~~~~~~~~---~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~ 519 (658)
..+.+.+...+ ..+..+++..+++.+.+.+|+.+|+.|.++ +.++|+|||||.||++||+.||+|||| +|+.+
T Consensus 158 ~~~~~~l~~~~~~~~~~~~~~~~~~di~~~~~~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sva~-~na~~ 236 (267)
T d1nf2a_ 158 DELKEILSERFKDVVKVFKSFPTYLEIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAM-ENAIE 236 (267)
T ss_dssp HHHHHHHHHHHTTTSEEEEEETTEEEEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEEC-TTSCH
T ss_pred HHHHHHHHHhhCCcEEEEEeecceeeecCCCCchhHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCCcEEEe-CCCCH
Confidence 44444444433 345566778899999999999999999987 667899999999999999999999999 67778
Q ss_pred hhhhhcccccccccchHH
Q 041225 520 QAVMASDFAMGQFRFLKR 537 (658)
Q Consensus 520 ~~k~~AD~vl~~~~~l~~ 537 (658)
.+|+.||+|+.+.+.-..
T Consensus 237 ~~k~~A~~i~~~~~~~Gv 254 (267)
T d1nf2a_ 237 KVKEASDIVTLTNNDSGV 254 (267)
T ss_dssp HHHHHCSEECCCTTTTHH
T ss_pred HHHHhCCEEcCCCCccHH
Confidence 899999999987665433
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.86 E-value=7.7e-22 Score=170.38 Aligned_cols=126 Identities=27% Similarity=0.388 Sum_probs=103.2
Q ss_pred ccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHH
Q 041225 305 CDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKA 384 (658)
Q Consensus 305 ~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~ 384 (658)
.|++....++++|+++++++++|+.|+++||++||+|||+..++..+|+++|+.
T Consensus 8 ~d~~~~~~~g~~D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~-------------------------- 61 (135)
T d2b8ea1 8 FDKTGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD-------------------------- 61 (135)
T ss_dssp EECCCCCBCSCCCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS--------------------------
T ss_pred ECCceEEEEecCCCCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhhh--------------------------
Confidence 344445568899999999999999999999999999999999999999999971
Q ss_pred hcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCC
Q 041225 385 RYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCR 464 (658)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~ 464 (658)
T Consensus 62 -------------------------------------------------------------------------------- 61 (135)
T d2b8ea1 62 -------------------------------------------------------------------------------- 61 (135)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeEEEEcCcccHHHHHHHHHhcCCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhcccccccccchHHHHh
Q 041225 465 VVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLKRLLL 540 (658)
Q Consensus 465 ~~i~~~~~~~~K~~~v~~L~~~~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l~l 540 (658)
.++.+..|.+|...++.+++. ..|+++|||.||++||+.||+||+| +++.+.++.+||+++.+.++...+.+
T Consensus 62 -~v~~~~~p~~k~~~v~~~q~~--~~v~~vGDg~nD~~aL~~Advgia~-~~~~~~~~~aADivl~~~~l~~i~~a 133 (135)
T d2b8ea1 62 -LVIAEVLPHQKSEEVKKLQAK--EVVAFVGDGINDAPALAQADLGIAV-GSGSDVAVESGDIVLIRDDLRDVVAA 133 (135)
T ss_dssp -EEECSCCHHHHHHHHHHHTTT--SCEEEEECSSSSHHHHHHSSEEEEE-CCC--------SEEESSCCTHHHHHH
T ss_pred -hhccccchhHHHHHHHHHHcC--CEEEEEeCCCCcHHHHHhCCeeeec-CccCHHHHHhCCEEEECCCHHHHHHH
Confidence 256778899999999998874 6899999999999999999999999 45566789999999999887766544
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=99.85 E-value=6.8e-22 Score=194.76 Aligned_cols=232 Identities=18% Similarity=0.182 Sum_probs=143.4
Q ss_pred HHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCc------cCC-------CccEEE
Q 041225 300 AALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKL------LTP-------DMQQII 366 (658)
Q Consensus 300 ~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl------~~~-------~~~~i~ 366 (658)
++|+|+||||++.- ...+++++.++|++|+++|++++++|||+...+..++...++ +.. .++++.
T Consensus 3 ~if~DlDGTL~~~~--~~~i~~~~~~al~~l~~~gi~v~~~TGR~~~~~~~l~~~~~~~~~~~~I~~nGa~i~~~~~~i~ 80 (260)
T d2rbka1 3 ALFFDIDGTLVSFE--THRIPSSTIEALEAAHAKGLKIFIATGRPKAIINNLSELQDRNLIDGYITMNGAYCFVGEEVIY 80 (260)
T ss_dssp EEEECSBTTTBCTT--TSSCCHHHHHHHHHHHHTTCEEEEECSSCGGGCCSCHHHHHTTCCCEEEEGGGTEEEETTEEEE
T ss_pred EEEEECCCCCcCCC--CCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHhcCCCCceEecCCcccccCccccc
Confidence 46899999999751 236889999999999999999999999998876554432221 222 334455
Q ss_pred EcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEE-eCccHH
Q 041225 367 INGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALII-DGNSLV 445 (658)
Q Consensus 367 ~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~ 445 (658)
...++.+.++++++...+. +.............................. .........+........+.. ..+...
T Consensus 81 ~~~l~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (260)
T d2rbka1 81 KSAIPQEEVKAMAAFCEKK-GVPCIFVEEHNISVCQPNEMVKKIFYDFLHV-NVIPTVSFEEASNKEVIQMTPFITEEEE 158 (260)
T ss_dssp ECCCCHHHHHHHHHHHHHH-TCCEEEECSSCEEEESCCHHHHHHTTTTTCC-CCCCBCCHHHHHTSCCSEEEECCCHHHH
T ss_pred ccCCCHHHHHHHHHHHHHc-CCcEEEEecCceeeccchHHHHHHHHHhhcc-CcCcccCHhHhcCcceEEEeecCCHHHH
Confidence 5566899999988887764 2211111111111111111111111111111 111111222221111122221 112111
Q ss_pred HHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccchhhh
Q 041225 446 YILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAV 522 (658)
Q Consensus 446 ~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k 522 (658)
..+...+ ....+..+.+.++++.+.+.+|+.+++.|+++ +.+++++||||.||++||+.||+|||| +|+.+.+|
T Consensus 159 ~~~~~~~--~~~~~~~~~~~~~ei~p~~~sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~svav-~na~~~lk 235 (260)
T d2rbka1 159 KEVLPSI--PTCEIGRWYPAFADVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAM-GQAKEDVK 235 (260)
T ss_dssp HHHGGGS--TTCEEECSSTTCCEEESTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTSCHHHH
T ss_pred HHHHHHh--ccccceeecCcEEEEEeCCCCHHHHHHHHHHhccccHhheeEecCCcccHHHHHhCCeEEEe-CCCCHHHH
Confidence 1111111 22344555667899999999999999999987 668999999999999999999999999 67777899
Q ss_pred hhcccccccccchHHH
Q 041225 523 MASDFAMGQFRFLKRL 538 (658)
Q Consensus 523 ~~AD~vl~~~~~l~~l 538 (658)
+.||+|+.+.+.-..+
T Consensus 236 ~~A~~vt~~~~~~Gv~ 251 (260)
T d2rbka1 236 AAADYVTAPIDEDGIS 251 (260)
T ss_dssp HHSSEECCCGGGTHHH
T ss_pred HhCCEEeCCCCccHHH
Confidence 9999998776544333
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.85 E-value=1.8e-26 Score=239.44 Aligned_cols=337 Identities=13% Similarity=0.031 Sum_probs=207.2
Q ss_pred eccCCcccccccceEEEeccCcccccceEEEEEEEEcCcccCCchhhHHHHHHHHHhhhccccccccChHHHHHHhhccC
Q 041225 29 CRTLSINEDLGQIRYIFSDKTGTLTENKMEFQRASVCGKNYGNSLLLAQQVSAAAVRRWKLKSEISVDSKLMELLSKDLV 108 (658)
Q Consensus 29 vr~~~~~e~Lg~v~~i~~DKTGTLT~n~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (658)
.+-+.+.|+||...++|+|||||+|.|+|++..+. ++.....++....
T Consensus 27 ~~ll~s~e~Lg~~~~i~~~k~~~~t~~~i~~~~~~--------------------------------~~~il~~~k~~g~ 74 (380)
T d1qyia_ 27 YELLMDKCYLGLHSHIDWETLTDNDIQDIRNRIFQ--------------------------------KDKILNKLKSLGL 74 (380)
T ss_dssp HHHHHCTTTTCCSCCCCGGGCCHHHHHHHHHHHHT--------------------------------TTHHHHHHHHTTC
T ss_pred HHHhhchhhcccceeeecCcccchhhhhheeeeec--------------------------------chhhhHhhhhcCC
Confidence 35567789999999999999999999999664321 0111111111100
Q ss_pred cchhHHHHHHHHHHhhccceeecCCCCCCCCCCCCcccCCcceeeecCChhHHHHHHHHHHcCcEEEEEcCCeEEEEeCC
Q 041225 109 GDERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYTLFERTSGHIVIDING 188 (658)
Q Consensus 109 ~~~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~~~~~~~g 188 (658)
+. --++..+.++||.+.... ..++|.+.+++...+..+..+..
T Consensus 75 n~----~~dl~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~------------ 117 (380)
T d1qyia_ 75 NS----NWDMLFIVFSIHLIDILK---------------------KLSHDEIEAFMYQDEPVELKLQN------------ 117 (380)
T ss_dssp CC----HHHHHHHHHHHHHHHHHT---------------------TSCHHHHHHHHHCSSCHHHHHTT------------
T ss_pred Ch----hHHHHHHHHHHHHHHHHh---------------------hcCCCcHHHHHHHHhhccchHHH------------
Confidence 10 123455666677543221 12367777777654332221110
Q ss_pred cEEEEEEEEeeCCCCCCCeeEEEEEcCCCcEEEEEeCCchHhHHhhhcCccccHHHHHHHHHHHHHHhhcCCeEEEEEEe
Q 041225 189 EGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADSSMFNILAKDSKRNDLIRHITQSHLSEYSSQGLRTLVVASR 268 (658)
Q Consensus 189 ~~~~~~il~~~~F~s~rk~msviv~~~~~~~~l~~KGa~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~k 268 (658)
....+.....+||++.+|+|+++....++.+..+.||+++.+.. ++..+..+...+..++.+|+|++++|++
T Consensus 118 ~~~~~~~~~~i~f~~~~k~~~~~~~~~~~~~~~~~~~a~~~~~~--------~~~~~~~~~~~~~~~a~~~~r~l~~~~~ 189 (380)
T d1qyia_ 118 ISTNLADCFNLNEQLPLQFLDNVKVGKNNIYAALEEFATTELHV--------SDATLFSLKGALWTLAQEVYQEWYLGSK 189 (380)
T ss_dssp SGGGCSSCCCCCTTTTHHHHTTCCSSHHHHHHHHHHHHHHHTTC--------SCCGGGSTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHhccccccCCcchHHHHHhhhcccccchhHhhhhccHhhcCC--------cHHHHHHHHhHHHHHHHHHHHHHHHhhh
Confidence 01112224568999999999987766555555666777765521 1122344566778899999999998887
Q ss_pred cCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeeccccccccCC--ChHHHHHHHHhcCCeEEEEecCChh
Q 041225 269 DLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGIEDKLQD--GVPEAIEALRQAGIKVWVLTGDKQD 346 (658)
Q Consensus 269 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~~d~l~~--~~~~aI~~l~~~GI~v~i~TGr~~~ 346 (658)
.++..+. ....+....|.++.+++++| +++++|+.|+++|++++|+|||+..
T Consensus 190 ~~~~~~~--------------------------~~~~~~~~~g~i~~~~~i~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~ 243 (380)
T d1qyia_ 190 LYEDVEK--------------------------KIARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYT 243 (380)
T ss_dssp HHHHHHC--------------------------SCCSCSSCCCTTTTCCBSSCHHHHHHHHHHHHHTTCEEEEECSSCHH
T ss_pred ccccccc--------------------------ccchhhHhcccccccccccchhhHHHHHHHHHHCCCeEEEECCCCHH
Confidence 5433211 12234455677777888766 9999999999999999999999999
Q ss_pred HHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCch
Q 041225 347 TAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDV 426 (658)
Q Consensus 347 ~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (658)
++..+++++|+...-.......+ +++ .......... .......
T Consensus 244 ~a~~il~~lgl~~~F~~~~i~~~---~d~-------------------------------~~~~~~~~~~-~~~~KP~-- 286 (380)
T d1qyia_ 244 ETVVPFENLGLLPYFEADFIATA---SDV-------------------------------LEAENMYPQA-RPLGKPN-- 286 (380)
T ss_dssp HHHHHHHHHTCGGGSCGGGEECH---HHH-------------------------------HHHHHHSTTS-CCCCTTS--
T ss_pred HHHHHHHHcCCcccCCcceEEec---chh-------------------------------hhhhhhcccc-ccccCCC--
Confidence 99999999998643211100000 000 0000000000 0000000
Q ss_pred hhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhcCCCeEEEEcCCcCChhhhhh
Q 041225 427 KEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQM 506 (658)
Q Consensus 427 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~~~~~v~aiGDg~NDi~Ml~~ 506 (658)
+..+.. .....+.+|.+|..+++.++.. ++.|+++|||.||++|.+.
T Consensus 287 --------------------------p~~~~~------~~~~~~~~~~~k~~iv~~~~~~-~~~~~~vGD~~~D~~aak~ 333 (380)
T d1qyia_ 287 --------------------------PFSYIA------ALYGNNRDKYESYINKQDNIVN-KDDVFIVGDSLADLLSAQK 333 (380)
T ss_dssp --------------------------THHHHH------HHHCCCGGGHHHHHHCCTTCSC-TTTEEEEESSHHHHHHHHH
T ss_pred --------------------------hHHHHH------HHHHcCCCHHHHHHHHHHhCCC-CCeEEEECCCHHHHHHHHH
Confidence 000000 1135677889999999888876 6899999999999999999
Q ss_pred cc---eeEEecCccchhh-----hhhcccccccccchHHHH
Q 041225 507 AD---VGVGICGQEGRQA-----VMASDFAMGQFRFLKRLL 539 (658)
Q Consensus 507 A~---vgIam~~~~~~~~-----k~~AD~vl~~~~~l~~l~ 539 (658)
|| +||+| |..+..+ ...||+++.++..+..++
T Consensus 334 Ag~~~Igv~~-G~~g~~~~~el~~~~AD~ii~~~~el~~il 373 (380)
T d1qyia_ 334 IGATFIGTLT-GLKGKDAAGELEAHHADYVINHLGELRGVL 373 (380)
T ss_dssp HTCEEEEESC-BTTBGGGHHHHHHTTCSEEESSGGGHHHHH
T ss_pred CCCCEEEEec-CCCCcccHHHHHhCCCCEEECCHHHHHHHH
Confidence 99 89988 4333222 237999999988877664
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.83 E-value=2.2e-21 Score=187.31 Aligned_cols=177 Identities=20% Similarity=0.113 Sum_probs=124.6
Q ss_pred hhHHHHHHHHHHhhccceeecCCCCCCCCCCCCcccCCcceeeecCChhHHHHHHHHHHcCcEEEEEcCCeEEE----Ee
Q 041225 111 ERIAAHEFFLTLAACNTVIPIPTPSRSSGCTNGLLENVEAIDYQGESPDEQALVSAASAYGYTLFERTSGHIVI----DI 186 (658)
Q Consensus 111 ~~~~~~~~~~~l~lC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~~~~----~~ 186 (658)
..+.++.++.+++|||+++...+. ..+.+... ++|+|.||+.++.+.|+............ ..
T Consensus 46 ~~~~l~~ll~~~~LCn~a~l~~~~------------~~~~~~~~-G~pTE~ALl~~a~k~g~~~~~~~~~~~~~~~~~~~ 112 (239)
T d1wpga3 46 QFDGLVELATICALCNDSSLDFNE------------TKGVYEKV-GEATETALTTLVEKMNVFNTEVRNLSKVERANACN 112 (239)
T ss_dssp GCHHHHHHHHHHHHSCSCEEEEET------------TTTEEEEE-SCHHHHHHHHHHHHHCTTCCCCSSSCHHHHTTHHH
T ss_pred ccHHHHHHHHHHHhcCCCEeeecC------------CCCeEEEc-CCCCcHHHHHHHHHhCCChHHhhccchhhhhccch
Confidence 344677899999999988764322 11334334 59999999999999987543221100000 00
Q ss_pred CCcEEEEEEEEeeCCCCCCCeeEEEEEcCCC-----cEEEEEeCCchHhHHhhhcCc------cccHHHHHHHHHHHHHH
Q 041225 187 NGEGLRLDVLGLHEFDSVRKRMSVVIRFPDN-----SVKVLVKGADSSMFNILAKDS------KRNDLIRHITQSHLSEY 255 (658)
Q Consensus 187 ~g~~~~~~il~~~~F~s~rk~msviv~~~~~-----~~~l~~KGa~e~i~~~~~~~~------~~~~~~~~~~~~~~~~~ 255 (658)
......+++++.+||+|+|||||||++.+++ .+.+|+|||||.|+++|+... ..++..++.+.+.++.+
T Consensus 113 ~~~~~~~~~v~~~pF~S~rK~Msvv~~~~~~~~~~~~~~l~vKGApe~iL~~C~~~~~~~~~~~l~~~~~~~~~~~~~~~ 192 (239)
T d1wpga3 113 SVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEW 192 (239)
T ss_dssp HHHHHHEEEEEEEEEETTTTEEEEEEEESSGGGGGGCSEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHH
T ss_pred hhhhhhCeEEEEeeecccccEEEEEEEcCCCCcccceeEEEEeCChHHHHHhccceecCCceeeCCHHHHHHHHHHHHHH
Confidence 0012468899999999999999999998875 378999999999999998532 34677788888888886
Q ss_pred --hhcCCeEEEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceeeecccc
Q 041225 256 --SSQGLRTLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLLGATGI 315 (658)
Q Consensus 256 --~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTllg~~~~ 315 (658)
+.+|+|||++|||.++.++...+.. . ......++.|+||+|.+|+
T Consensus 193 ~~a~~glRvLa~A~k~~~~~~~~~~~~-------~--------~~~~~~~E~~L~flGlvgi 239 (239)
T d1wpga3 193 GTGRDTLRCLALATRDTPPKREEMVLD-------D--------SSRFMEYETDLTFVGVVGM 239 (239)
T ss_dssp TTSSCCCEEEEEEEESSCCCGGGCCTT-------C--------GGGHHHHTCSEEEEEEEEE
T ss_pred hHhhCCCEEEEEEEEECCccccccccc-------c--------hhhHHHhcCCCEEEEEECC
Confidence 6799999999999998654221100 0 0022346889999999874
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=99.83 E-value=3.1e-21 Score=192.27 Aligned_cols=228 Identities=14% Similarity=0.125 Sum_probs=145.5
Q ss_pred HHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc------------------CC
Q 041225 299 TAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL------------------TP 360 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~------------------~~ 360 (658)
+++++|+||||+..- +..+++.+.++|++|+++|++++++|||++..+..++..+++. .+
T Consensus 11 kli~~DlDGTLl~~~--~~~i~~~~~~al~~l~~~Gi~v~i~TGR~~~~~~~~~~~l~~~~~~~~~~~~i~~~g~~~~~~ 88 (283)
T d2b30a1 11 KLLLIDFDGTLFVDK--DIKVPSENIDAIKEAIEKGYMVSICTGRSKVGILSAFGEENLKKMNFYGMPGVYINGTIVYDQ 88 (283)
T ss_dssp CEEEEETBTTTBCCT--TTCSCHHHHHHHHHHHHHTCEEEEECSSCHHHHHHHHCHHHHHHHTCCSCSEEEGGGTEEECT
T ss_pred cEEEEECCCCCcCCC--CCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCcccccccCCceEEEeeeEEEcC
Confidence 357899999998421 3479999999999999999999999999999998887665431 12
Q ss_pred CccEEEEcCCCHHHHHHHHHHHHHhcCccc-Cccccccccccc---hhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEE
Q 041225 361 DMQQIIINGNSEEECKDLLADAKARYGVKS-SNRTKCNSKLKR---SAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLA 436 (658)
Q Consensus 361 ~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 436 (658)
.+..+.....+.+...++++.+........ ........+... ............. .......+........++.
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 166 (283)
T d2b30a1 89 IGYTLLDETIETDVYAELISYLVEKNLVNQTIFHRGESNYVTEDNKYADFLQKMYSENR--SIIIRHNEMLKYRTMNKLM 166 (283)
T ss_dssp TCCEEEECCCCHHHHHHHHHHHHHTTCGGGEEEEETTEEEEETTCTTTTHHHHHHSCCC--CEEECHHHHTTCCCCSEEE
T ss_pred CCcEeeecccCHHHHHHHHHHHHhhcccceEEEEecceeEEeccchHHHHHHHHhhccc--cccccHHHHhhcccceEEE
Confidence 344555667788888888888776421111 100001111111 0111111111100 0000000111111223333
Q ss_pred EEEeCccHHHHHHHhhHHhh---hhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhccee
Q 041225 437 LIIDGNSLVYILEKDLESDL---FDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVG 510 (658)
Q Consensus 437 l~~~~~~~~~~~~~~~~~~~---~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vg 510 (658)
+..+......... .+...+ .....+....+++.+.+.+|+.+++.++++ +.++|++||||.||++||+.||+|
T Consensus 167 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~ 245 (283)
T d2b30a1 167 IVLDPSESKTVIG-NLKQKFKNKLTIFTTYNGHAEVTKLGHDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYS 245 (283)
T ss_dssp ECCCTTTHHHHHH-HHHHHSTTTEEEEECTTSCEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEE
T ss_pred EecCHHHHHHHHH-HHHHHhcccceEEEecceeEeecCCcchhHHHHHHHhhhcccccceEEEecCChhhHHHHHhCCcE
Confidence 3333334433333 333322 234455667899999999999999999987 567899999999999999999999
Q ss_pred EEecCccchhhhhhcccccccc
Q 041225 511 VGICGQEGRQAVMASDFAMGQF 532 (658)
Q Consensus 511 Iam~~~~~~~~k~~AD~vl~~~ 532 (658)
||| +|+.+++|..||+++...
T Consensus 246 va~-~na~~~~k~~a~~v~~~~ 266 (283)
T d2b30a1 246 FAV-ANATDSAKSHAKCVLPVS 266 (283)
T ss_dssp EEC-TTCCHHHHHHSSEECSSC
T ss_pred EEe-CCCCHHHHHhCCEEECCc
Confidence 999 677778999999998654
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.80 E-value=8e-20 Score=175.86 Aligned_cols=195 Identities=16% Similarity=0.153 Sum_probs=127.4
Q ss_pred HHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCC---------
Q 041225 300 AALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGN--------- 370 (658)
Q Consensus 300 ~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~--------- 370 (658)
++++|+||||+.. +..+++++.++|++|+++|++++++|||+...+..++..+++..+ ++..+|.
T Consensus 4 ~i~~D~DGTL~~~---~~~i~~~~~~~l~~l~~~gi~v~~~TGR~~~~~~~~~~~~~~~~~---~i~~~g~~~~~~~~~~ 77 (230)
T d1wr8a_ 4 AISIDIDGTITYP---NRMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGP---VVAEDGGAISYKKKRI 77 (230)
T ss_dssp EEEEESTTTTBCT---TSCBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSC---EEEGGGTEEEETTEEE
T ss_pred EEEEecCCCCcCC---CCccCHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHhcCCCcc---cccccceeeecccccc
Confidence 4578999999986 558999999999999999999999999999999999888876432 3333332
Q ss_pred ---CHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHH
Q 041225 371 ---SEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYI 447 (658)
Q Consensus 371 ---~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 447 (658)
.......+.......+... .. ............ +.........
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~---------------------------~~------~~~~~~~~~~~~-~~~~~~~~~~ 123 (230)
T d1wr8a_ 78 FLASMDEEWILWNEIRKRFPNA---------------------------RT------SYTMPDRRAGLV-IMRETINVET 123 (230)
T ss_dssp ESCCCSHHHHHHHHHHHHCTTC---------------------------CB------CTTGGGCSSCEE-ECTTTSCHHH
T ss_pred ccccccHHHHHHHHHHHhcccc---------------------------cc------eeecccceeeEE-EecccccHHH
Confidence 0011111111111110000 00 000001111111 1222222222
Q ss_pred HHHhhHHhhh-hhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhh
Q 041225 448 LEKDLESDLF-DLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVM 523 (658)
Q Consensus 448 ~~~~~~~~~~-~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~ 523 (658)
+++.+..... .........+++.+.+.+|+.+++.++++ +++++++||||.||++||+.||+|||| +++.+.+|+
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~iei~~~~~~K~~al~~l~~~~~i~~~~~~~iGD~~NDi~ml~~ag~~vav-~na~~~~k~ 202 (230)
T d1wr8a_ 124 VREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYKVAV-AQAPKILKE 202 (230)
T ss_dssp HHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECSGGGHHHHHHSSEEEEC-TTSCHHHHT
T ss_pred HHHHHHHhccceEEeeCCcEEEEeeCCcCcchhhcccccccccchhheeeeecCccHHHHHHHCCeEEEE-CCCCHHHHH
Confidence 2222222111 12344567789999999999999999887 678899999999999999999999999 677778999
Q ss_pred hcccccccccch
Q 041225 524 ASDFAMGQFRFL 535 (658)
Q Consensus 524 ~AD~vl~~~~~l 535 (658)
.||+|+.+.+.-
T Consensus 203 ~A~~v~~~~~~~ 214 (230)
T d1wr8a_ 203 NADYVTKKEYGE 214 (230)
T ss_dssp TCSEECSSCHHH
T ss_pred hCCEEECCCCcC
Confidence 999998776543
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.78 E-value=3.2e-19 Score=171.30 Aligned_cols=196 Identities=21% Similarity=0.166 Sum_probs=128.8
Q ss_pred HHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCC---------
Q 041225 300 AALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGN--------- 370 (658)
Q Consensus 300 ~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~--------- 370 (658)
++++|+||||++. +..+.+++.+++++|++.|++++++|||+...+..+...+|+.. .++..+|.
T Consensus 5 li~~D~DGTL~~~---~~~i~~~~~~al~~l~~~g~~v~~~TGr~~~~~~~~~~~~~~~~---~~i~~~G~~~~~~~~~~ 78 (225)
T d1l6ra_ 5 LAAIDVDGNLTDR---DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGING---PVFGENGGIMFDNDGSI 78 (225)
T ss_dssp EEEEEHHHHSBCT---TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCS---CEEEGGGTEEECTTSCE
T ss_pred EEEEecCCCCcCC---CCcCCHHHHHHHHHHHHCCCEEEEEcCCchhhhHHHHHHcCCCc---eEEeecceEEEeCCccE
Confidence 4578999999987 56899999999999999999999999999999999988888633 34433332
Q ss_pred ----CHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHH
Q 041225 371 ----SEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVY 446 (658)
Q Consensus 371 ----~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 446 (658)
..+...+.+........... ............+.........
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------~~~~~~~~~~~~~~~~~~~~~~ 124 (225)
T d1l6ra_ 79 KKFFSNEGTNKFLEEMSKRTSMRS----------------------------------ILTNRWREASTGFDIDPEDVDY 124 (225)
T ss_dssp EESSCSHHHHHHHHHHTTTSSCBC----------------------------------CGGGGGCSSSEEEBCCGGGHHH
T ss_pred EEecChHHHHHHHHHHHHhcCcce----------------------------------eecccceeeeeccccCHHHHHH
Confidence 11222222222221110000 0000001111122122222222
Q ss_pred HHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhh
Q 041225 447 ILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVM 523 (658)
Q Consensus 447 ~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~ 523 (658)
. .......... +..+...+++.+.+.+|+.+++.|+++ ++++|++||||.||++||+.||+|||| +|+.+.+++
T Consensus 125 ~-~~~~~~~~~~-i~~~~~~~~i~~~~~~K~~ai~~l~~~~~i~~~~v~~~GDs~nD~~m~~~a~~~vav-~na~~~~k~ 201 (225)
T d1l6ra_ 125 V-RKEAESRGFV-IFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKACP-ANATDNIKA 201 (225)
T ss_dssp H-HHHHHTTTEE-EEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHTSSSEEEEC-TTSCHHHHH
T ss_pred H-HHHHhhcCcE-EEECCcEEEecCCccchHHHHHHHhhhhccchhheeeecCCcchHHHHHHCCeEEEE-CCCcHHHHH
Confidence 2 2222222222 233345689999999999999999876 567899999999999999999999999 666778999
Q ss_pred hcccccccccchHHH
Q 041225 524 ASDFAMGQFRFLKRL 538 (658)
Q Consensus 524 ~AD~vl~~~~~l~~l 538 (658)
.||+|+...+.-..+
T Consensus 202 ~ad~v~~~~~~~gi~ 216 (225)
T d1l6ra_ 202 VSDFVSDYSYGEEIG 216 (225)
T ss_dssp HCSEECSCCTTHHHH
T ss_pred hCCEEECCCCcCHHH
Confidence 999998777654444
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=99.75 E-value=2.7e-18 Score=165.14 Aligned_cols=197 Identities=18% Similarity=0.145 Sum_probs=114.0
Q ss_pred HHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCC---------
Q 041225 300 AALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGN--------- 370 (658)
Q Consensus 300 ~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~--------- 370 (658)
++++|+||||++. +..++++++++|++|+++|++++++|||+...+..+...+++-. ..++..||.
T Consensus 6 li~~DlDGTLl~~---~~~i~~~~~~al~~l~~~Gi~~~i~TGR~~~~~~~~~~~~~~~~--~~~i~~nGa~i~~~~~~~ 80 (232)
T d1xvia_ 6 LVFSDLDGTLLDS---HSYDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQG--LPLIAENGAVIQLAEQWQ 80 (232)
T ss_dssp EEEEECTTTTSCS---SCCSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCTT--SCEEEGGGTEEECCTTCT
T ss_pred EEEEECCCCccCC---cCcCCHHHHHHHHHHHHCCCEEEEEeCCChhhchhHHHHhccCC--ceEEccCCeEEEecCCcc
Confidence 3578999999986 55799999999999999999999999999999999999988732 234555543
Q ss_pred ------------CHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEE
Q 041225 371 ------------SEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALI 438 (658)
Q Consensus 371 ------------~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 438 (658)
....+................... ............. ..................
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~ 147 (232)
T d1xvia_ 81 EIDGFPRIISGISHGEISLVLNTLREKEHFKFTTFD-------DVDDATIAEWTGL------SRSQAALTQLHEASVTLI 147 (232)
T ss_dssp TSTTTTEEECSSCHHHHHHHHHHHHHHHCCCEEEGG-------GSCHHHHHHHHCC------CHHHHHHHHCCSSCEEEE
T ss_pred ccchhhhhhhHHHHHHHHHhhhhhhhhhcccccccc-------chhhhhhhhhhcc------cchhhhhhhhcceeeeec
Confidence 111111111111111100000000 0000000000000 000000000011112222
Q ss_pred EeC-ccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhc------CCCeEEEEcCCcCChhhhhhcceeE
Q 041225 439 IDG-NSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSR------TDDMTLAIGDGANDVSMIQMADVGV 511 (658)
Q Consensus 439 ~~~-~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~------~~~~v~aiGDg~NDi~Ml~~A~vgI 511 (658)
... ............. ...........+++.+.+.+|+.+++.|+++ +.++|++||||.||++||+.||+||
T Consensus 148 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~K~~~~~~l~~~~~~l~i~~~~~iafGD~~NDl~Ml~~a~~~v 226 (232)
T d1xvia_ 148 WRDSDERMAQFTARLNE-LGLQFMQGARFWHVLDASAGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYAV 226 (232)
T ss_dssp ECSCHHHHHHHHHHHHH-TTEEEEECSSCEEEEETTCCHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEEE
T ss_pred ccccHHHHHHHHHHhhh-ccceeeeccceeeccCCCchHHHHHHHHHHHHHHcCCChhcEEEEcCCHhHHHHHHhCCeEE
Confidence 222 2222222222222 2222334455689999999999999999863 6788999999999999999999999
Q ss_pred EecC
Q 041225 512 GICG 515 (658)
Q Consensus 512 am~~ 515 (658)
+|.|
T Consensus 227 aV~n 230 (232)
T d1xvia_ 227 IVKG 230 (232)
T ss_dssp ECCC
T ss_pred EEeC
Confidence 9954
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=99.74 E-value=1.3e-18 Score=168.87 Aligned_cols=201 Identities=15% Similarity=0.084 Sum_probs=115.3
Q ss_pred HHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCC---------
Q 041225 300 AALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGN--------- 370 (658)
Q Consensus 300 ~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~--------- 370 (658)
++++|+||||++. ..++.++++|++|+++|++++++|||++..+..+.+.+++.. .++..+|.
T Consensus 4 li~~DlDGTLl~~-----~~~~~~~~ai~~l~~~G~~~~~aTGR~~~~~~~~~~~~~~~~---~~i~~nGa~i~~~~~~~ 75 (243)
T d1wzca1 4 LIFLDIDKTLIPG-----YEPDPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVET---PFISENGSAIFIPKGYF 75 (243)
T ss_dssp EEEECCBTTTBSS-----SCSGGGHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTCCS---CEEETTTTEEEECTTCC
T ss_pred EEEEeCCCCCCCC-----CCCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhcccc---cccccCCcEEEcCCCce
Confidence 4689999999864 446789999999999999999999999999999999998743 23333332
Q ss_pred -------------------CHHHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhh-h
Q 041225 371 -------------------SEEECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEV-A 430 (658)
Q Consensus 371 -------------------~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 430 (658)
..+.+...+......+..... .... ......... ......... .
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~-~~~~~~~~~------~~~~~~~~~~~ 139 (243)
T d1wzca1 76 PFDVKGKEVGNYIVIELGIRVEKIREELKKLENIYGLKYY---------GNST-KEEIEKFTG------MPPELVPLAME 139 (243)
T ss_dssp C----------CEEEECSCCHHHHHHHHHHHHHHHTCBCG---------GGSC-HHHHHHHHC------CCGGGHHHHTC
T ss_pred ecccchhHHHHHHHHHHhhhHHHHHHHHHhhhhhcccchh---------hhhh-HHHHHHhhc------CchhHHHHHHh
Confidence 111111111111111100000 0000 000000000 000000000 1
Q ss_pred ccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhc----CCCeEEEEcCCcCChhhhhh
Q 041225 431 AIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSR----TDDMTLAIGDGANDVSMIQM 506 (658)
Q Consensus 431 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~----~~~~v~aiGDg~NDi~Ml~~ 506 (658)
......++......... .... ..+.......+++.+.+.+|+.+++.++++ +.++++|||||.||++||+.
T Consensus 140 ~~~~~~~~~~~~~~~~~---~~~~--~~~~~~~~~~~~~~~~~~~K~~al~~l~~~~~~~~~~~~~a~GD~~ND~~Ml~~ 214 (243)
T d1wzca1 140 REYSETIFEWSRDGWEE---VLVE--GGFKVTMGSRFYTVHGNSDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEV 214 (243)
T ss_dssp CSSEEEECBCSSSCHHH---HHHH--TTCEEEECSSSEEEECSCCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTT
T ss_pred hhcchhhhhhhhHHHHH---hhhh--cCeEEeecccccchhhhhccHHHHHHHHHHhcCCCcccEEEEcCCHhHHHHHHc
Confidence 11111111111111110 0111 111122233467889999999999998875 55799999999999999999
Q ss_pred cceeEEecCccchhhhhhcccccc
Q 041225 507 ADVGVGICGQEGRQAVMASDFAMG 530 (658)
Q Consensus 507 A~vgIam~~~~~~~~k~~AD~vl~ 530 (658)
||+|||| +|+..+++..++.+..
T Consensus 215 a~~~va~-~Na~~~~~~~~~~i~~ 237 (243)
T d1wzca1 215 VDKVFIV-GSLKHKKAQNVSSIID 237 (243)
T ss_dssp SSEEEEE-SSCCCTTCEEESCHHH
T ss_pred CCcEEEe-CCCChHHHhhhhHHHH
Confidence 9999999 7776667777776643
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.69 E-value=3.5e-18 Score=165.38 Aligned_cols=71 Identities=11% Similarity=0.093 Sum_probs=63.1
Q ss_pred hhccCCeeEEEEcCcccHHHHHHHHHhcCCCeEEEEcCC----cCChhhhhhcc-eeEEecCccchhhhhhcccccc
Q 041225 459 LATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDG----ANDVSMIQMAD-VGVGICGQEGRQAVMASDFAMG 530 (658)
Q Consensus 459 i~~s~~~~i~~~~~~~~K~~~v~~L~~~~~~~v~aiGDg----~NDi~Ml~~A~-vgIam~~~~~~~~k~~AD~vl~ 530 (658)
...++..++++.+.+++|+.+++.|++++.++|++|||+ .||++||+.|+ .|+|| +|+.+.+|..+|++++
T Consensus 169 ~~~~~~~~lei~~~~vsKg~al~~L~~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av-~na~~~~k~~~~~~~~ 244 (244)
T d2fuea1 169 FSRGGMISFDVFPEGWDKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSV-VSPQDTVQRCREIFFP 244 (244)
T ss_dssp EECCSSSCEEEEETTCSTTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEEC-SSHHHHHHHHHHHHCT
T ss_pred EeeccCccceecchhccHHHHHHHHhcCChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEc-CCHHHHHHHHHHhcCC
Confidence 345667889999999999999999999888999999995 59999999998 79999 7777789999999874
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=99.66 E-value=9.7e-18 Score=162.87 Aligned_cols=201 Identities=13% Similarity=0.114 Sum_probs=120.3
Q ss_pred HHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCC-------CH
Q 041225 300 AALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGN-------SE 372 (658)
Q Consensus 300 ~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~-------~~ 372 (658)
++++|+||||++. .. .++..+++.+++++|+.++++|||++..+..+.+.+++..+ +.++..+|. ..
T Consensus 5 li~~DlDGTL~~~---~~--~~~~~~~~~~~~~~g~~v~i~TGR~~~~~~~~~~~~~~~~~-~~~i~~~G~~i~~~~~~~ 78 (244)
T d1s2oa1 5 LLISDLDNTWVGD---QQ--ALEHLQEYLGDRRGNFYLAYATGRSYHSARELQKQVGLMEP-DYWLTAVGSEIYHPEGLD 78 (244)
T ss_dssp EEEECTBTTTBSC---HH--HHHHHHHHHHTTGGGEEEEEECSSCHHHHHHHHHHHTCCCC-SEEEETTTTEEEETTEEC
T ss_pred EEEEECcccCCCC---CC--CHHHHHHHHHHHcCCCEEEEECCCCHHHHHHHHHHcCCCCC-ceEEeccceEEEEccCcc
Confidence 4568999999874 11 23556778888999999999999999999999999998654 233444443 11
Q ss_pred HHHHHHHHHHHHhcCcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCcc---HHHHHH
Q 041225 373 EECKDLLADAKARYGVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNS---LVYILE 449 (658)
Q Consensus 373 ~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~~~ 449 (658)
......+.. ... .......... ...... ................... ....+.
T Consensus 79 ~~~~~~~~~---~~~---------------~~~~~~~~~~-~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (244)
T d1s2oa1 79 QHWADYLSE---HWQ---------------RDILQAIADG-FEALKP-----QSPLEQNPWKISYHLDPQACPTVIDQLT 134 (244)
T ss_dssp HHHHHHHHT---TCC---------------HHHHHHHHHT-CTTEEE-----CCGGGCBTTBEEEEECTTSCTHHHHHHH
T ss_pred hHHHHHHHH---HHh---------------HHHHHHHHhh-cccccc-----cChhhhcceEEEEeccccccHHHHHHHH
Confidence 111111100 000 0000000000 000000 0000111122222222221 222222
Q ss_pred HhhHHh--hhhhhccCCeeEEEEcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhh
Q 041225 450 KDLESD--LFDLATSCRVVLCCRVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMA 524 (658)
Q Consensus 450 ~~~~~~--~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~ 524 (658)
..+... ........+..+++.+.+.+|+.+++.++++ +.++|++||||.||++||+.||+||+| +|+.+.+++.
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~K~~a~~~l~~~~gi~~~~~v~~GD~~ND~~Ml~~~~~~vav-~na~~~lk~~ 213 (244)
T d1s2oa1 135 EMLKETGIPVQVIFSSGKDVDLLPQRSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIV-RNAQPELLHW 213 (244)
T ss_dssp HHHHTSSCCEEEEEETTTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEEC-TTCCHHHHHH
T ss_pred HHHHhhcccceeeecCCcEEEEEeCccchhHHHHHHHHhccCChhhEEEEcCCCCCHHHHhhCCcEEEe-CCCCHHHHHH
Confidence 222221 1223344556799999999999999999988 567899999999999999999999999 6777779999
Q ss_pred ccccccc
Q 041225 525 SDFAMGQ 531 (658)
Q Consensus 525 AD~vl~~ 531 (658)
||.+...
T Consensus 214 a~~~~~~ 220 (244)
T d1s2oa1 214 YDQWGDS 220 (244)
T ss_dssp HHHHCCT
T ss_pred hhccccc
Confidence 9965544
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.62 E-value=5.8e-17 Score=155.27 Aligned_cols=72 Identities=14% Similarity=0.218 Sum_probs=58.7
Q ss_pred hhccCCeeEEEEcCcccHHHHHHHHHhcCCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhcccccccccch
Q 041225 459 LATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFL 535 (658)
Q Consensus 459 i~~s~~~~i~~~~~~~~K~~~v~~L~~~~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l 535 (658)
.+.++..++++.+.+.+|+.+++.|.++ +.+++||||.||++||+.++.|+||+ ++. .+.+|++.+.+..-.
T Consensus 143 ~~~~~~~~idi~p~g~~Kg~al~~l~~~--~~~i~~GDs~ND~~Mf~~~~~~~av~-~g~--~~~~A~~~~~~~~ev 214 (229)
T d1u02a_ 143 ETYYGKMIIELRVPGVNKGSAIRSVRGE--RPAIIAGDDATDEAAFEANDDALTIK-VGE--GETHAKFHVADYIEM 214 (229)
T ss_dssp EEEECSSEEEEECTTCCHHHHHHHHHTT--SCEEEEESSHHHHHHHHTTTTSEEEE-ESS--SCCCCSEEESSHHHH
T ss_pred EEEeeceEEEEecCCCCHHHHHHHHhcc--ccceeecCCCChHHHHhccCCeEEEE-eCC--CCccCeEEcCCHHHH
Confidence 4566778899999999999999999986 67999999999999999998887773 222 356889988766543
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.55 E-value=4.5e-17 Score=157.48 Aligned_cols=214 Identities=13% Similarity=0.070 Sum_probs=111.5
Q ss_pred HhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCc-------------cCCCccEEEE
Q 041225 301 ALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKL-------------LTPDMQQIII 367 (658)
Q Consensus 301 ~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl-------------~~~~~~~i~~ 367 (658)
+++|+||||+.. +..++++++++|++|+++|+ ++++|||....+......... ....++.+..
T Consensus 6 ~~fDlDGTLl~~---~~~i~~~~~~al~~l~~~g~-~~i~Tgr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (243)
T d2amya1 6 CLFDVDGTLTAP---RQKITKEMDDFLQKLRQKIK-IGVVGGSDFEKVQEQLGNDVVEKYDYVFPENGLVAYKDGKLLCR 81 (243)
T ss_dssp EEEESBTTTBCT---TSCCCHHHHHHHHHHTTTSE-EEEECSSCHHHHHHHHCTTHHHHCSEEESGGGTEEEETTEEEEE
T ss_pred EEEcCcCCeeCC---CCcCCHHHHHHHHHHHcCCC-EEEEcCCChHHhHHHHhhhccccceEEecCcEEEEecCCcccee
Confidence 356999999987 66899999999999999885 789999998887665433221 1112333333
Q ss_pred cCCCHHHHHHHHHHHHHhc---CcccCccccccccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCc-EEEEEeCcc
Q 041225 368 NGNSEEECKDLLADAKARY---GVKSSNRTKCNSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIAS-LALIIDGNS 443 (658)
Q Consensus 368 ~g~~~~~~~~ii~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~ 443 (658)
.....+....++....... ................... ..................... .........
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (243)
T d2amya1 82 QNIQSHLGEALIQDLINYCLSYIAKIKLPKKRGTFIEFRNG--------MLNVSPIGRSCSQEERIEFYELDKKENIRQK 153 (243)
T ss_dssp CCHHHHHCHHHHHHHHHHHHHHHHHCCCSCCCSCSEEEETT--------EEEECSSCTTCCHHHHHHHHHHHHHHCHHHH
T ss_pred cchhHHHHHHHHHHHHhhhhhhheeccccccccchhhhhhh--------hhcccccccccchhhhhhhhhhhcchhhhHH
Confidence 3334444444433332210 0000000000000000000 000000000000000000000 000000000
Q ss_pred HHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHHHHHHHHHhcCCCeEEEEcC----CcCChhhhhhcc-eeEEecCccc
Q 041225 444 LVYILEKDLESDLFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGD----GANDVSMIQMAD-VGVGICGQEG 518 (658)
Q Consensus 444 ~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~~~v~~L~~~~~~~v~aiGD----g~NDi~Ml~~A~-vgIam~~~~~ 518 (658)
....+.............+.+.++++.+.+++|+.+++.|.+.+.++|++||| |.||++||+.|+ .|+++ ++.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~lei~~~~vsKg~al~~l~~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v-~~~- 231 (243)
T d2amya1 154 FVADLRKEFAGKGLTFSIGGQISFDVFPDGWDKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSV-TAP- 231 (243)
T ss_dssp HHHHHHHHTTTSCEEEEEETTTEEEEEETTCSGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEEC-SSH-
T ss_pred HHHHHHHHhcccceEEEecCCccceeeccccCHHHHHHHHhCCCcceEEEEcCCCCCCCCcHHHHHccCCcEEEe-CCH-
Confidence 00111111111122344566778999999999999999999887899999999 789999999998 67888 443
Q ss_pred hhhhhhcccc
Q 041225 519 RQAVMASDFA 528 (658)
Q Consensus 519 ~~~k~~AD~v 528 (658)
++++..++.+
T Consensus 232 ~~~~~~~~~l 241 (243)
T d2amya1 232 EDTRRICELL 241 (243)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 4577777654
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.31 E-value=1e-12 Score=122.75 Aligned_cols=63 Identities=24% Similarity=0.172 Sum_probs=45.2
Q ss_pred CcccHHHHHHHHHhcCCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhccccccc-ccchH
Q 041225 472 APLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQ-FRFLK 536 (658)
Q Consensus 472 ~~~~K~~~v~~L~~~~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~-~~~l~ 536 (658)
.+..+...++.+.- +.++|+|||||.||++||+.||+|||| ++.....++++|+++.+ +.-+.
T Consensus 130 ~~~~~~~~~~~~~i-~~~eviaiGDg~NDi~Ml~~Ag~gIAm-na~~~v~~~~~~~~~~~~~~d~~ 193 (206)
T d1rkua_ 130 QKDPKRQSVIAFKS-LYYRVIAAGDSYNDTTMLSEAHAGILF-HAPENVIREFPQFPAVHTYEDLK 193 (206)
T ss_dssp SSSHHHHHHHHHHH-TTCEEEEEECSSTTHHHHHHSSEEEEE-SCCHHHHHHCTTSCEECSHHHHH
T ss_pred chhhHHHHHHHhcc-cccceEEecCCccCHHHHHhCCccEEE-CCCHHHHHhCCCceeecCHHHHH
Confidence 33333344444433 579999999999999999999999999 66665567788887643 33343
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=99.26 E-value=8.8e-12 Score=112.35 Aligned_cols=62 Identities=16% Similarity=0.160 Sum_probs=53.7
Q ss_pred EcCcccHHHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhcccccccc
Q 041225 470 RVAPLQKAGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQF 532 (658)
Q Consensus 470 ~~~~~~K~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~ 532 (658)
.....+|..+++.++++ ++++|+++||+.||++||+.|++|+|| +++.+.+|+.||+|+...
T Consensus 75 ~~~~~~K~~~l~~~~~~~~i~~~~v~~vGDd~nDl~~l~~~g~siap-~nA~~~vk~~A~~Vt~~~ 139 (177)
T d1k1ea_ 75 FLGKLEKETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAV-ADAPIYVKNAVDHVLSTH 139 (177)
T ss_dssp EESCSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTSCHHHHTTSSEECSSC
T ss_pred ccccccHHHHHHHHHHHhcCCcceeEEecCCccHHHHHhhCCeEEEc-CCccHHHHHhCCEEeCCC
Confidence 34556888888888776 678999999999999999999999999 677778999999998764
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.15 E-value=6.2e-11 Score=111.61 Aligned_cols=128 Identities=19% Similarity=0.249 Sum_probs=93.7
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCcccccc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCN 397 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~ 397 (658)
++.|++.+.|+.|+++|++++++||.....+.++++.+|+-.. .++ .|...
T Consensus 82 ~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~--~v~-an~~~-------------------------- 132 (217)
T d1nnla_ 82 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPAT--NVF-ANRLK-------------------------- 132 (217)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGG--GEE-EECEE--------------------------
T ss_pred ccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCccc--cee-eeeee--------------------------
Confidence 5789999999999999999999999999999999999998422 111 11000
Q ss_pred ccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEE----EEcCc
Q 041225 398 SKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLC----CRVAP 473 (658)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~----~~~~~ 473 (658)
+. ..+...-. ....+
T Consensus 133 -----------------------------------------~~--------------------~~G~~~g~~~~~p~~~~ 151 (217)
T d1nnla_ 133 -----------------------------------------FY--------------------FNGEYAGFDETQPTAES 151 (217)
T ss_dssp -----------------------------------------EC--------------------TTSCEEEECTTSGGGST
T ss_pred -----------------------------------------ee--------------------ehhccccceeeeeeecc
Confidence 00 00000000 01345
Q ss_pred ccHHHHHHHHHhc-CCCeEEEEcCCcCChhhhhhcceeEEecCccc-hhhhhhcccccccccch
Q 041225 474 LQKAGIVDLIKSR-TDDMTLAIGDGANDVSMIQMADVGVGICGQEG-RQAVMASDFAMGQFRFL 535 (658)
Q Consensus 474 ~~K~~~v~~L~~~-~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~-~~~k~~AD~vl~~~~~l 535 (658)
..|+.+++.+++. +.+.++++|||.||++|++.||++||+.++.. ...++.||+++.+|..+
T Consensus 152 ~~K~~~v~~~~~~~~~~~~~~vGDs~~Di~~~~~ag~~va~~~~~~~~~~~~~ad~~i~~f~el 215 (217)
T d1nnla_ 152 GGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITDFVEL 215 (217)
T ss_dssp THHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEECSSCCCHHHHHHCSEEESCGGGG
T ss_pred chHHHHHHHHHhccCccccEEEEeCHhhHHHHHhCCceEEECCCHHHHHHHHhCCCEeCCHHHh
Confidence 6799999999875 67889999999999999999999999955433 45677899999887543
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.95 E-value=7.1e-10 Score=103.15 Aligned_cols=127 Identities=21% Similarity=0.206 Sum_probs=90.4
Q ss_pred cccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCccccc
Q 041225 317 DKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKC 396 (658)
Q Consensus 317 d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~ 396 (658)
..+.+++.+.++.++..|..++++||.....+.......+....-...+....
T Consensus 74 ~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------- 126 (210)
T d1j97a_ 74 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKD--------------------------- 126 (210)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEET---------------------------
T ss_pred hhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhhhhhhhhcccc---------------------------
Confidence 36788999999999999999999999998888888777665321100000000
Q ss_pred cccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccH
Q 041225 397 NSKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQK 476 (658)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K 476 (658)
.............+..|
T Consensus 127 ---------------------------------------------------------------~~~~~~~~~~~~~~~~~ 143 (210)
T d1j97a_ 127 ---------------------------------------------------------------GKLTGDVEGEVLKENAK 143 (210)
T ss_dssp ---------------------------------------------------------------TEEEEEEECSSCSTTHH
T ss_pred ---------------------------------------------------------------ccccccccccccccccc
Confidence 00000112233455667
Q ss_pred HHHHHHHHhc---CCCeEEEEcCCcCChhhhhhcceeEEecCccchhhhhhcccccccccch
Q 041225 477 AGIVDLIKSR---TDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFL 535 (658)
Q Consensus 477 ~~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~vgIam~~~~~~~~k~~AD~vl~~~~~l 535 (658)
..++..++.. +++++++||||.||++|++.||+|||| + +.+.+++.||+|+.+.++.
T Consensus 144 ~~~~~~~~~~~~~~~~~~i~iGDs~nDi~m~~~ag~~va~-n-a~~~lk~~Ad~vi~~~d~~ 203 (210)
T d1j97a_ 144 GEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF-C-AKPILKEKADICIEKRDLR 203 (210)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESSGGGHHHHHHCSEEEEE-S-CCHHHHTTCSEEECSSCGG
T ss_pred cchhhhHHHHhcccccceEEecCCcChHHHHHHCCCCEEE-C-CCHHHHHhCCEEEcCCCHH
Confidence 7777777765 567899999999999999999999999 3 4456899999999876543
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=98.53 E-value=7.6e-08 Score=90.39 Aligned_cols=114 Identities=15% Similarity=0.188 Sum_probs=78.3
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCcccccc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCN 397 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~ 397 (658)
++.|++.+.++.|+++|++++++||.....+..+++.+|+... ++. +.
T Consensus 75 ~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~---~~a-n~---------------------------- 122 (226)
T d2feaa1 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDR---IYC-NH---------------------------- 122 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGG---EEE-EE----------------------------
T ss_pred chhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCccc---eee-ee----------------------------
Confidence 5789999999999999999999999999999999988876321 111 00
Q ss_pred ccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHH
Q 041225 398 SKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKA 477 (658)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~ 477 (658)
+..++... ...+... ........+|..|.
T Consensus 123 ---------------------------------------~~~~~~~~--------~~~~~~~----~~~~~~~~k~~~~~ 151 (226)
T d2feaa1 123 ---------------------------------------ASFDNDYI--------HIDWPHS----CKGTCSNQCGCCKP 151 (226)
T ss_dssp ---------------------------------------EECSSSBC--------EEECTTC----CCTTCCSCCSSCHH
T ss_pred ---------------------------------------EEEeCCcc--------eeccccc----cccccccCCHHHHH
Confidence 00000000 0000000 00012245677888
Q ss_pred HHHHHHHhcCCCeEEEEcCCcCChhhhhhcceeEEecC
Q 041225 478 GIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICG 515 (658)
Q Consensus 478 ~~v~~L~~~~~~~v~aiGDg~NDi~Ml~~A~vgIam~~ 515 (658)
.+++.+... +++|+++|||.||++|++.||+++|+.+
T Consensus 152 ~~~~~~~~~-~~~~i~iGDs~~Dl~~a~~A~~~~a~~~ 188 (226)
T d2feaa1 152 SVIHELSEP-NQYIIMIGDSVTDVEAAKLSDLCFARDY 188 (226)
T ss_dssp HHHHHHCCT-TCEEEEEECCGGGHHHHHTCSEEEECHH
T ss_pred HHHHHhcCC-CceEEEEeCchhhHHHHHHCCEEEEecc
Confidence 888877664 7899999999999999999999999933
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=98.36 E-value=3e-07 Score=87.90 Aligned_cols=61 Identities=15% Similarity=0.216 Sum_probs=45.8
Q ss_pred HHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHH----cCccCCCccE
Q 041225 300 AALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALS----CKLLTPDMQQ 364 (658)
Q Consensus 300 ~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~----~gl~~~~~~~ 364 (658)
.+++|+||||+.. ...+ +++.++|++|+++|++++++|+++..+...++.. +|+..+...+
T Consensus 4 ~v~fDlDGTL~~~---~~~i-~~a~~~i~~l~~~g~~~~~~Tn~s~~~~~~~~~~L~~~~~~~~~~~~i 68 (253)
T d1yv9a1 4 GYLIDLDGTIYLG---KEPI-PAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRLANEFDIHVPASLV 68 (253)
T ss_dssp EEEECCBTTTEET---TEEC-HHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHHHHHSCCCCCGGGE
T ss_pred EEEEcCCCccEeC---CCcC-ccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHHHHhcCCccccccc
Confidence 4579999999985 3455 7899999999999999999998776666666544 4554444433
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=98.18 E-value=6.6e-07 Score=85.28 Aligned_cols=62 Identities=15% Similarity=0.201 Sum_probs=47.4
Q ss_pred HHHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEe---cCChhHHHHHHHHcCccCCCccE
Q 041225 299 TAALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLT---GDKQDTAISIALSCKLLTPDMQQ 364 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~T---Gr~~~~a~~ia~~~gl~~~~~~~ 364 (658)
+.+.+|+||||+.. .+.+ +++.++|+.|+++|++++++| +|..........++|+-.+...+
T Consensus 4 k~VifDlDGTL~~~---~~~i-~~a~e~i~~l~~~g~~~~~~TN~~~~~~~~~~~~l~~~G~~~~~~~i 68 (250)
T d2c4na1 4 KNVICDIDGVLMHD---NVAV-PGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVDVPDSVF 68 (250)
T ss_dssp CEEEEECBTTTEET---TEEC-TTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTCCCCGGGE
T ss_pred CEEEEECCCeeEEC---CCcC-ccHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHHHhhccccccceeE
Confidence 34679999999974 4455 689999999999999999998 56666666666778875444433
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=98.06 E-value=2.2e-05 Score=74.86 Aligned_cols=62 Identities=16% Similarity=0.162 Sum_probs=47.4
Q ss_pred HHhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEec---CChhHHHHHHHHcCccCCCccEE
Q 041225 300 AALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTG---DKQDTAISIALSCKLLTPDMQQI 365 (658)
Q Consensus 300 ~~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TG---r~~~~a~~ia~~~gl~~~~~~~i 365 (658)
.+++|+||||+.. ...+ +++.++|+.|+++|++++++|+ ++...........|+-....+++
T Consensus 9 ~vlFDlDGTL~~~---~~~i-~~a~e~l~~l~~~g~~~~~~TN~~~~~~~~~~~~~~~~g~~~~~~~v~ 73 (261)
T d1vjra_ 9 LFILDMDGTFYLD---DSLL-PGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVDVPDDAVV 73 (261)
T ss_dssp EEEECCBTTTEET---TEEC-TTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCCCCGGGEE
T ss_pred EEEEeCCCeeEEC---CccC-chHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhhccccccceec
Confidence 4679999999984 3344 8999999999999999999995 55555566667788755544444
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=97.98 E-value=7.9e-06 Score=73.35 Aligned_cols=52 Identities=23% Similarity=0.313 Sum_probs=38.3
Q ss_pred CCCeEEEEcCCcCChhhhhhccee--EEec-Ccc-chhhhhhcccccccccchHHH
Q 041225 487 TDDMTLAIGDGANDVSMIQMADVG--VGIC-GQE-GRQAVMASDFAMGQFRFLKRL 538 (658)
Q Consensus 487 ~~~~v~aiGDg~NDi~Ml~~A~vg--Iam~-~~~-~~~~k~~AD~vl~~~~~l~~l 538 (658)
+++++++|||+.+|+.+=+.||++ +.+. |.. .......||+++.++.-+..+
T Consensus 124 ~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~~~l~dl~~~ 179 (182)
T d2gmwa1 124 DMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNSLADLPQA 179 (182)
T ss_dssp CGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESCGGGHHHH
T ss_pred ccccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCcccccCCCEEECCHHHHHHH
Confidence 578899999999999999999984 4442 322 223456699999988766544
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=97.93 E-value=1.4e-06 Score=75.63 Aligned_cols=46 Identities=24% Similarity=0.304 Sum_probs=38.6
Q ss_pred HHhhhccceeeecccc---------ccccCCChHHHHHHHHhcCCeEEEEecCCh
Q 041225 300 AALIECDLTLLGATGI---------EDKLQDGVPEAIEALRQAGIKVWVLTGDKQ 345 (658)
Q Consensus 300 ~~~~d~DgTllg~~~~---------~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~ 345 (658)
++.+|+||||+..... ++.+.|++.+.++.|+++|++++++|||+.
T Consensus 9 ~vifDiDgTL~~~~~~~~~~~~~~~~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~ 63 (149)
T d1ltqa1 9 AVIFDVDGTLAKMNGRGPYDLEKCDTDVINPMVVELSKMYALMGYQIVVVSGRES 63 (149)
T ss_dssp EEEEETBTTTBCCSSCCTTCGGGGGGCCBCHHHHHHHHHHHHTTCEEEEEECSCC
T ss_pred EEEEEcCCCcEeCCCCCcCCccccccCccCHHHHHHHHHHHhccCeEEEEecCcH
Confidence 4678999999865332 346788999999999999999999999974
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.89 E-value=5e-06 Score=73.29 Aligned_cols=58 Identities=22% Similarity=0.155 Sum_probs=40.9
Q ss_pred HHhhhccceeeecccc---------------------ccccCCChHHHHHHHHhcCCeEEEEecCChh-HHHHHHHHcCc
Q 041225 300 AALIECDLTLLGATGI---------------------EDKLQDGVPEAIEALRQAGIKVWVLTGDKQD-TAISIALSCKL 357 (658)
Q Consensus 300 ~~~~d~DgTllg~~~~---------------------~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~-~a~~ia~~~gl 357 (658)
.+.+|+||||.....- +-++.|++.++++.|+++|++++++|+.+.. .+....+..++
T Consensus 7 ~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~ 86 (164)
T d1u7pa_ 7 LAVFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQNIQLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDL 86 (164)
T ss_dssp EEEECCBTTTBSSCTTTTCCSCEEECTTSCEEETTCCEECCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTC
T ss_pred EEEEcCCCcccCCccccccCccHhHHhcchHhhhhccccccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhcccc
Confidence 4678999999642111 1146789999999999999999999986653 33444444443
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.75 E-value=6.2e-05 Score=72.02 Aligned_cols=44 Identities=18% Similarity=0.331 Sum_probs=40.3
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCC
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPD 361 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~ 361 (658)
++++++.+.++.|++.|+++.++||--...+.++++++|+..++
T Consensus 135 ~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~n 178 (291)
T d2bdua1 135 MLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSN 178 (291)
T ss_dssp CBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBTT
T ss_pred CcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCccC
Confidence 68999999999999999999999999999999999999986543
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=97.74 E-value=4e-05 Score=72.58 Aligned_cols=48 Identities=17% Similarity=0.269 Sum_probs=37.2
Q ss_pred HhhhccceeeeccccccccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHH
Q 041225 301 ALIECDLTLLGATGIEDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIA 352 (658)
Q Consensus 301 ~~~d~DgTllg~~~~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia 352 (658)
+.+|+||||+.. ++.+ |.+.++|+.|+++|++++++|+.+..+...++
T Consensus 5 vlFDlDGTL~~~---~~~i-~~a~e~l~~l~~~g~~~~~~TN~s~~~~~~~~ 52 (253)
T d1wvia_ 5 YLIDLDGTIYKG---KDRI-PAGEDFVKRLQERQLPYILVTNNTTRTPEMVQ 52 (253)
T ss_dssp EEEECBTTTEET---TEEC-HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHH
T ss_pred EEEcCcCceEEC---CCcC-ccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHH
Confidence 568999999874 3344 88999999999999999999975544433333
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=97.67 E-value=3.8e-05 Score=70.91 Aligned_cols=42 Identities=24% Similarity=0.278 Sum_probs=39.0
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccC
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLT 359 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~ 359 (658)
++.|++.+.++.|++.|++++++||.....+..+.+.+|+..
T Consensus 95 ~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~ 136 (224)
T d2hsza1 95 RLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDH 136 (224)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGG
T ss_pred chHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchh
Confidence 578999999999999999999999999999999999999854
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=97.57 E-value=9.8e-05 Score=67.81 Aligned_cols=42 Identities=19% Similarity=0.201 Sum_probs=38.4
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccC
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLT 359 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~ 359 (658)
++-|++.++|+.|+++|+++.++||.+...+..+.+.+|+..
T Consensus 88 ~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~ 129 (218)
T d1te2a_ 88 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRD 129 (218)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGG
T ss_pred cccchHHHHHHHhhhccccccccccccccccccccccccccc
Confidence 456899999999999999999999999999999999999843
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=97.56 E-value=4.9e-05 Score=70.56 Aligned_cols=43 Identities=21% Similarity=0.199 Sum_probs=38.0
Q ss_pred ccCCChHHHHHHHHhcC-CeEEEEecCChhHHHHHHHHcCccCC
Q 041225 318 KLQDGVPEAIEALRQAG-IKVWVLTGDKQDTAISIALSCKLLTP 360 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~G-I~v~i~TGr~~~~a~~ia~~~gl~~~ 360 (658)
++-|++.+++++|++.| +++.++||.....+..+.+..|+...
T Consensus 91 ~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~~ 134 (228)
T d2hcfa1 91 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHY 134 (228)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTT
T ss_pred eecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhccccc
Confidence 45689999999999997 89999999999999999999998543
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=97.50 E-value=0.00013 Score=66.48 Aligned_cols=116 Identities=15% Similarity=0.145 Sum_probs=82.0
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCCCccEEEEcCCCHHHHHHHHHHHHHhcCcccCcccccc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTPDMQQIIINGNSEEECKDLLADAKARYGVKSSNRTKCN 397 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~~~~~i~~~g~~~~~~~~ii~~~~~~~~~~~~~~~~~~ 397 (658)
++.+++.+.++.++..| +++++|+.+...+..+....|+...-+
T Consensus 84 ~~~~~~~~~l~~l~~~~-~~~i~t~~~~~~~~~~l~~~gl~~~fd----------------------------------- 127 (210)
T d2ah5a1 84 QLFPQIIDLLEELSSSY-PLYITTTKDTSTAQDMAKNLEIHHFFD----------------------------------- 127 (210)
T ss_dssp EECTTHHHHHHHHHTTS-CEEEEEEEEHHHHHHHHHHTTCGGGCS-----------------------------------
T ss_pred cchhHHHHHHhhhhccc-chhhcccccchhhhHHHHhhccccccc-----------------------------------
Confidence 67899999999998776 889999999999999999988743311
Q ss_pred ccccchhHHHHHHhhcCCCCCCCCCCCchhhhhccCcEEEEEeCccHHHHHHHhhHHhhhhhhccCCeeEEEEcCcccHH
Q 041225 398 SKLKRSAEIEYLAISNDAKFSDVPQGHDVKEVAAIASLALIIDGNSLVYILEKDLESDLFDLATSCRVVLCCRVAPLQKA 477 (658)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~s~~~~i~~~~~~~~K~ 477 (658)
.++.....+..|.
T Consensus 128 -------------------------------------------------------------------~v~~~~~~~~~~p 140 (210)
T d2ah5a1 128 -------------------------------------------------------------------GIYGSSPEAPHKA 140 (210)
T ss_dssp -------------------------------------------------------------------EEEEECSSCCSHH
T ss_pred -------------------------------------------------------------------ccccccccccccc
Confidence 1223333344555
Q ss_pred HHHHHHHhc---CCCeEEEEcCCcCChhhhhhcce-eEEec-C-ccchhhh-hhcccccccccchH
Q 041225 478 GIVDLIKSR---TDDMTLAIGDGANDVSMIQMADV-GVGIC-G-QEGRQAV-MASDFAMGQFRFLK 536 (658)
Q Consensus 478 ~~v~~L~~~---~~~~v~aiGDg~NDi~Ml~~A~v-gIam~-~-~~~~~~k-~~AD~vl~~~~~l~ 536 (658)
..++.+++. +++++++|||+.+|+.+-+.||+ .|++. | ....+.. ..+|+++.+..-+.
T Consensus 141 ~~~~~~~~~~~~~~~~~v~VGDs~~Di~aa~~aGi~~i~v~~g~~~~~~l~~~~pd~vi~~l~el~ 206 (210)
T d2ah5a1 141 DVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHKPLEVL 206 (210)
T ss_dssp HHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESSTTHHH
T ss_pred cccchhhhhhhcccccceeecCCHHHHHHHHHcCCeEEEEcCCCCCHHHHHhCCCCEEECCHHHHH
Confidence 555555554 57899999999999999999997 45663 2 1222233 34889988766543
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=97.42 E-value=0.00021 Score=73.95 Aligned_cols=82 Identities=17% Similarity=0.236 Sum_probs=66.1
Q ss_pred hHHHHhh--hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccchhhHHHHHHHHHHhhhhhhhheecccCCCh
Q 041225 535 LKRLLLV--HGHWNYQRIGYLVLYNFYRNAVFVLMLFWYILFTGFSTTSALTDWSSVFYSLLYTSVPTIVVGIVDKDLSH 612 (658)
Q Consensus 535 l~~l~l~--~gr~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~n~~~~~~p~~~~~~~~~~~~~ 612 (658)
.+++..+ .||..+.|++|.+.|.+..|+..+++.+++.++ ..++|+++.+++|+|++++.+|+++++... .++
T Consensus 218 Vr~L~avE~~g~~~~~~~~k~i~~~l~~n~~~v~~~~~~~~l---~~p~pl~~~qILwinli~d~lpaiaL~~ep--~d~ 292 (472)
T d1wpga4 218 VRSLPSVETLGRAIYNNMKQFIRYLISSNVGEVVCIFLTAAL---GLPEALIPVQLLWVNLVTDGLPATALGFNP--PDL 292 (472)
T ss_dssp ESCTTHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS---CCCCSCCHHHHHHHHHTTTHHHHHHHTTCC--CCS
T ss_pred hhhHHHHHHHHHHHHHHhHHhhhhhhhhhHHHHHHHHHHHHc---CCCccccHHHHHHHHHHhHHHHHHHHhcCC--Cch
Confidence 3445455 499999999999999999999999998888877 667899999999999999999999997533 344
Q ss_pred HHHhhCCcc
Q 041225 613 KTLMQYPKL 621 (658)
Q Consensus 613 ~~~~~~p~~ 621 (658)
+.+.+.|.-
T Consensus 293 ~iM~~~Pr~ 301 (472)
T d1wpga4 293 DIMDRPPRS 301 (472)
T ss_dssp GGGGSCCCC
T ss_pred hhhcCCCCC
Confidence 444444433
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=97.40 E-value=6.7e-05 Score=68.43 Aligned_cols=45 Identities=29% Similarity=0.253 Sum_probs=35.5
Q ss_pred HHHhhhccceeeeccccc-----cccCCChHHHHHHHHhcCCeEEEEecC
Q 041225 299 TAALIECDLTLLGATGIE-----DKLQDGVPEAIEALRQAGIKVWVLTGD 343 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~~-----d~l~~~~~~aI~~l~~~GI~v~i~TGr 343 (658)
.++++|.||||.-..+.- =++-|++.++|++|+++|++++++|-.
T Consensus 24 ~Aif~DrDGtl~~~~~y~~~~~~~~l~pgv~e~L~~L~~~G~~l~IvTNQ 73 (209)
T d2o2xa1 24 PALFLDRDGTINVDTDYPSDPAEIVLRPQMLPAIATANRAGIPVVVVTNQ 73 (209)
T ss_dssp CCEEECSBTTTBCCCSCTTCGGGCCBCGGGHHHHHHHHHHTCCEEEEEEC
T ss_pred CEEEEeCCCCeECCCCCCCCHHHeEecccHHHHHHHHHhhCCeEEEeccc
Confidence 357899999996533211 146789999999999999999999964
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=97.19 E-value=0.00012 Score=69.08 Aligned_cols=41 Identities=32% Similarity=0.379 Sum_probs=37.5
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
++-+++.++++.|+++|+++.++||.+...+..+.+..|+.
T Consensus 99 ~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~ 139 (257)
T d1swva_ 99 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQ 139 (257)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHT
T ss_pred ccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhc
Confidence 57899999999999999999999999999998888888774
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=97.02 E-value=4.7e-05 Score=66.33 Aligned_cols=46 Identities=26% Similarity=0.382 Sum_probs=35.8
Q ss_pred HHHhhhccceeeecccc----c--c--ccCCChHHHHHHHHhcCCeEEEEecCC
Q 041225 299 TAALIECDLTLLGATGI----E--D--KLQDGVPEAIEALRQAGIKVWVLTGDK 344 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~~----~--d--~l~~~~~~aI~~l~~~GI~v~i~TGr~ 344 (658)
+++++|.||||+...+- + + .+-|++.++|+.|+++|++++++|..+
T Consensus 3 K~i~~D~DGtL~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~g~~l~i~TNq~ 56 (161)
T d2fpwa1 3 KYLFIDRDGTLISEPPSDFQVDRFDKLAFEPGVIPQLLKLQKAGYKLVMITNQD 56 (161)
T ss_dssp EEEEECCBTTTBCCC--CCCCCSGGGCCBCTTHHHHHHHHHHTTEEEEEEEECT
T ss_pred cEEEEeCCCCeEeeCCCCCccCCHHHceECccHHHHHHHHHHcCCceeeecccc
Confidence 45689999999764321 1 1 356899999999999999999999754
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=96.88 E-value=0.0021 Score=59.07 Aligned_cols=41 Identities=15% Similarity=0.171 Sum_probs=35.2
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccC
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLT 359 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~ 359 (658)
++.|++.++++.|+ +|++++++|+.....+..+.+.+|+..
T Consensus 100 ~~~p~~~~~L~~l~-~~~~i~i~Sn~~~~~~~~~l~~~gl~~ 140 (230)
T d1x42a1 100 ELYPEVVEVLKSLK-GKYHVGMITDSDTEYLMAHLDALGIKD 140 (230)
T ss_dssp CBCTTHHHHHHHHB-TTBEEEEEESSCHHHHHHHHHHHTCGG
T ss_pred cccccHHHHHHHhh-ccCceeeeeccccccchhhhccccccc
Confidence 46789999999996 589999999998888888888888743
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.82 E-value=0.00048 Score=62.21 Aligned_cols=40 Identities=20% Similarity=0.269 Sum_probs=33.8
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
.+.|++.++++.|+++|++++++|+... .+..+.+..|+.
T Consensus 82 ~~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~~~~l~~~gl~ 121 (204)
T d2go7a1 82 VLMPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVE 121 (204)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHHTCG
T ss_pred cccchHHhhhhcccccccchhhhcccch-hhhhhhhhcccc
Confidence 5679999999999999999999999765 556677778874
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=96.74 E-value=0.0015 Score=60.58 Aligned_cols=41 Identities=17% Similarity=0.216 Sum_probs=36.9
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
.+.|++.+++++|+++|+++.++|+............+|+.
T Consensus 127 ~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~ 167 (253)
T d1zs9a1 127 EFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEG 167 (253)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTB
T ss_pred ccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcc
Confidence 57799999999999999999999999998888888888764
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=96.55 E-value=0.00048 Score=62.45 Aligned_cols=41 Identities=17% Similarity=0.270 Sum_probs=35.4
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccC
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLT 359 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~ 359 (658)
++.|++.+.++.|++ +++++++|+.....+..+.+..|+..
T Consensus 82 ~~~~g~~~~L~~l~~-~~~~~ivT~~~~~~~~~~l~~~~l~~ 122 (207)
T d2hdoa1 82 ELYPGITSLFEQLPS-ELRLGIVTSQRRNELESGMRSYPFMM 122 (207)
T ss_dssp EECTTHHHHHHHSCT-TSEEEEECSSCHHHHHHHHTTSGGGG
T ss_pred ccccchhhhhhhhcc-cccccccccccccccccccccccccc
Confidence 467899999999974 79999999999999999998888743
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.35 E-value=0.0044 Score=57.33 Aligned_cols=41 Identities=22% Similarity=0.346 Sum_probs=35.2
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccC
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLT 359 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~ 359 (658)
.+.|++.++++.|+ +|++++++|+.+...+....+..|+..
T Consensus 109 ~~~~~~~~~L~~L~-~~~~l~i~Tn~~~~~~~~~l~~~gl~~ 149 (247)
T d2gfha1 109 ILADDVKAMLTELR-KEVRLLLLTNGDRQTQREKIEACACQS 149 (247)
T ss_dssp CCCHHHHHHHHHHH-TTSEEEEEECSCHHHHHHHHHHHTCGG
T ss_pred ccCccHHHHHHHhh-cccceEEeecccchhhhhhhhhccccc
Confidence 46689999999998 589999999999888888888888754
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.32 E-value=0.0044 Score=54.73 Aligned_cols=40 Identities=15% Similarity=0.334 Sum_probs=32.7
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCcc
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLL 358 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~ 358 (658)
.+.+++.+.|+.|+++|++++++|+.+.. +..+.+.+++.
T Consensus 79 ~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~-~~~~l~~~~l~ 118 (187)
T d2fi1a1 79 ILFEGVSDLLEDISNQGGRHFLVSHRNDQ-VLEILEKTSIA 118 (187)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCTH-HHHHHHHTTCG
T ss_pred cccchhHHHHHHHHhhhccccccccCccc-hhhhhhhhccc
Confidence 46689999999999999999999997654 44567777763
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=96.29 E-value=0.033 Score=49.53 Aligned_cols=63 Identities=22% Similarity=0.243 Sum_probs=46.4
Q ss_pred ccHHHHHHHHHhc-CCCeEEEEcCCcCChhhhhhc----ceeEEecCccchhhhhhcccccccccchHHH
Q 041225 474 LQKAGIVDLIKSR-TDDMTLAIGDGANDVSMIQMA----DVGVGICGQEGRQAVMASDFAMGQFRFLKRL 538 (658)
Q Consensus 474 ~~K~~~v~~L~~~-~~~~v~aiGDg~NDi~Ml~~A----~vgIam~~~~~~~~k~~AD~vl~~~~~l~~l 538 (658)
..|..+++...+. .....+.+|||.-|++||+.+ |++|+..||+- +...|++.+.+-+....+
T Consensus 184 g~k~~i~~~~~~~~~~~~~~~VGDSITDve~Lr~~r~~gGlaIsFNGN~Y--al~eA~VaiiS~~~~a~~ 251 (308)
T d1y8aa1 184 GEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAFNGNEY--ALKHADVVIISPTAMSEA 251 (308)
T ss_dssp HHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEESCCHH--HHTTCSEEEECSSTHHHH
T ss_pred chhHHHHHhhcccccCCcceeccCccccHHHHHHHhcCCCeeEEecCccc--cccccceEEeccchhHHH
Confidence 4567777776655 444569999999999999987 55666666664 888899988777665444
|
| >d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: BT0820-like domain: Hypothetical protein BT0820 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=95.84 E-value=0.0025 Score=51.78 Aligned_cols=49 Identities=10% Similarity=-0.008 Sum_probs=38.6
Q ss_pred Hhhhccceeeecccc-ccccCCChHHHHHHHHhcCCeEEEEecCChhHHH
Q 041225 301 ALIECDLTLLGATGI-EDKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAI 349 (658)
Q Consensus 301 ~~~d~DgTllg~~~~-~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~ 349 (658)
+++|+||||.....- ..++-+++.+.|++|++.|+++++.|||......
T Consensus 3 i~vDiDGTl~~~~~~~~~kPi~~~Ie~l~~L~~~G~~IIi~TaR~~~~~~ 52 (122)
T d2obba1 3 IAVDFDGTIVEHRYPRIGEEIPFAVETLKLLQQEKHRLILWSVREGELLD 52 (122)
T ss_dssp EEECCBTTTBCSCTTSCCCBCTTHHHHHHHHHHTTCEEEECCSCCHHHHH
T ss_pred EEEEcCCCcCCCCCCccccccHHHHHHHHHHHHCCCeEEEEecCCCcchH
Confidence 468999999753221 1346789999999999999999999999875543
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=95.77 E-value=0.0092 Score=53.85 Aligned_cols=43 Identities=16% Similarity=0.305 Sum_probs=37.3
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCC
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTP 360 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~ 360 (658)
.+.+++.++++.+++.|+++.++|+-....+.......++...
T Consensus 93 ~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~ 135 (220)
T d1zrna_ 93 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDG 135 (220)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGG
T ss_pred cccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhcccccc
Confidence 5678899999999999999999999999888888888777543
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=95.70 E-value=0.0055 Score=55.58 Aligned_cols=41 Identities=17% Similarity=0.226 Sum_probs=33.7
Q ss_pred cccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccC
Q 041225 317 DKLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLT 359 (658)
Q Consensus 317 d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~ 359 (658)
.++-|++.+.++.|++.|+++.++|++.. +....+..|+..
T Consensus 90 ~~~~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l~~~~l~~ 130 (221)
T d1o08a_ 90 ADVYPGILQLLKDLRSNKIKIALASASKN--GPFLLERMNLTG 130 (221)
T ss_dssp GGBCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCGG
T ss_pred ccccCCceeccccccccccceEEEeecch--hhHHHHhhcccc
Confidence 36789999999999999999999999754 566777777643
|
| >d2a29a1 d.220.1.1 (A:316-451) Potassium-transporting ATPase B chain, KdpB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Potassium-transporting ATPase B chain, KdpB species: Escherichia coli [TaxId: 562]
Probab=95.48 E-value=0.00093 Score=56.02 Aligned_cols=111 Identities=15% Similarity=0.208 Sum_probs=68.2
Q ss_pred eeeecCChhHHHHHHHHHHcCcEEEEEcCCeEEEEeCCcEEEEEEEEeeCCCCCCCeeEEEEEcCCCcEEEEEeCCchHh
Q 041225 151 IDYQGESPDEQALVSAASAYGYTLFERTSGHIVIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADSSM 230 (658)
Q Consensus 151 ~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~~~~~~~g~~~~~~il~~~~F~s~rk~msviv~~~~~~~~l~~KGa~e~i 230 (658)
.+..|.||+.+|++++|++.+.......... . ....+|....+...+.+. | ..+..|++..|
T Consensus 25 aE~~SeHPlakAIv~~Ak~~~~~~~~~~~~~----------~---~~~~~~~~~~~~~g~~~~---g--~~v~~G~~~~~ 86 (136)
T d2a29a1 25 ASLADETPEGRSIVILAKQRFNLRERDVQSL----------H---ATFVPFTAQSRMSGINID---N--RMIRKGSVDAI 86 (136)
T ss_dssp HHHTCCSHHHHHHHHHHHHHHCCCCCCTTTT----------T---CEEEEEETTTTEEEEEET---T--EEEEEECHHHH
T ss_pred HhCCCCchHHHHHHHHHHHhcCCCccccccc----------c---ccccccccccceEEEEEC---C--EEEEecHHHHH
Confidence 4556789999999999987653321110000 0 011233333332222221 2 45678888877
Q ss_pred HHhhhcCccccHHHHHHHHHHHHHHhhcCCeEEEEEEecCCHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHhhhccceee
Q 041225 231 FNILAKDSKRNDLIRHITQSHLSEYSSQGLRTLVVASRDLADEELKQWQHRYEDASTSLVDRASKLRQTAALIECDLTLL 310 (658)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a~k~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~DgTll 310 (658)
...+..... .+...+...++.++.+|..++.++ .|++++
T Consensus 87 ~~~~~~~g~---~~~~~~~~~~~~~~~~G~Tvv~Va--------------------------------------~d~~~~ 125 (136)
T d2a29a1 87 RRHVEANGG---HFPTDVDQKVDQVARQGATPLVVV--------------------------------------EGSRVL 125 (136)
T ss_dssp HHHHHHHTC---CCCHHHHHHHHHHHHTTSEEEEEE--------------------------------------ETTEEE
T ss_pred HHHHHHcCC---CCcHHHHHHHHHHHHCCCeEEEEE--------------------------------------ECCEEE
Confidence 665542110 123456677889999999998887 578999
Q ss_pred eccccccccC
Q 041225 311 GATGIEDKLQ 320 (658)
Q Consensus 311 g~~~~~d~l~ 320 (658)
|.+++.|.++
T Consensus 126 G~i~l~D~iK 135 (136)
T d2a29a1 126 GVIALKDIVK 135 (136)
T ss_dssp EEEEEEESSC
T ss_pred EEEEEEeecC
Confidence 9999999885
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=94.80 E-value=0.0083 Score=53.20 Aligned_cols=40 Identities=13% Similarity=0.201 Sum_probs=30.6
Q ss_pred cCCChHHHHHHHHhcCCeEEEEecCCh----hHHHHHHHHcCcc
Q 041225 319 LQDGVPEAIEALRQAGIKVWVLTGDKQ----DTAISIALSCKLL 358 (658)
Q Consensus 319 l~~~~~~aI~~l~~~GI~v~i~TGr~~----~~a~~ia~~~gl~ 358 (658)
.-+++.+.++.++++|++++.+|||.. .++..+.+.+|+.
T Consensus 87 p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p 130 (209)
T d2b82a1 87 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIP 130 (209)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCC
T ss_pred cchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCC
Confidence 345899999999999999999999975 3344444556663
|
| >d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein VC0232 domain: Hypothetical protein VC0232 species: Vibrio cholerae [TaxId: 666]
Probab=94.43 E-value=0.0053 Score=49.76 Aligned_cols=46 Identities=20% Similarity=0.169 Sum_probs=36.4
Q ss_pred Hhhhccceeeeccc---cccccCCChHHHHHHHHhcCCeEEEEecCChh
Q 041225 301 ALIECDLTLLGATG---IEDKLQDGVPEAIEALRQAGIKVWVLTGDKQD 346 (658)
Q Consensus 301 ~~~d~DgTllg~~~---~~d~l~~~~~~aI~~l~~~GI~v~i~TGr~~~ 346 (658)
+++|+|||+.-... -...+.+++.+.++.|++.|+++++.|+|...
T Consensus 4 i~~DiDGTI~~~~~~~y~~~~P~~~~Ie~l~~l~~~G~~Iii~TaR~~~ 52 (124)
T d1xpja_ 4 LIVDLDGTLTQANTSDYRNVLPRLDVIEQLREYHQLGFEIVISTARNMR 52 (124)
T ss_dssp EEECSTTTTBCCCCSCGGGCCBCHHHHHHHHHHHHTTCEEEEEECTTTT
T ss_pred EEEeCCCCeECCCCCCcCccCcCHHHHHHHHHHHHCCCEEEEEecCCcc
Confidence 46899999976422 12246688999999999999999999999743
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=92.52 E-value=0.0037 Score=64.20 Aligned_cols=37 Identities=22% Similarity=0.156 Sum_probs=33.2
Q ss_pred CCCeeeeccCCcccccccceEEEeccC--cccccceEEE
Q 041225 23 SGSRFQCRTLSINEDLGQIRYIFSDKT--GTLTENKMEF 59 (658)
Q Consensus 23 ~~~~i~vr~~~~~e~Lg~v~~i~~DKT--GTLT~n~m~~ 59 (658)
.+++++||+++++|+||+..++|+||| +|||.|.+.+
T Consensus 212 ak~~~lVr~L~avE~~g~~~~~~~~k~i~~~l~~n~~~v 250 (472)
T d1wpga4 212 AKKNAIVRSLPSVETLGRAIYNNMKQFIRYLISSNVGEV 250 (472)
T ss_dssp HTTTEEESCTTHHHHHTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhccchhhhHHHHHHHHHHHHHHhHHhhhhhhhhhHHHH
Confidence 467799999999999999999999998 9999996644
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=91.92 E-value=0.12 Score=45.99 Aligned_cols=53 Identities=11% Similarity=0.262 Sum_probs=38.1
Q ss_pred CCCeEEEEcCCcCChhhhhhccee-EEecCccc------hhh-hhhcccccccccchHHHH
Q 041225 487 TDDMTLAIGDGANDVSMIQMADVG-VGICGQEG------RQA-VMASDFAMGQFRFLKRLL 539 (658)
Q Consensus 487 ~~~~v~aiGDg~NDi~Ml~~A~vg-Iam~~~~~------~~~-k~~AD~vl~~~~~l~~l~ 539 (658)
.++++++|||+.+|+.+=+.||+- |++.+... ... ..-||+++.++.-+..++
T Consensus 157 ~p~~~l~vgDs~~dv~aA~~aG~~~i~v~~~~~~~~~~~~~l~~~~ad~vi~~l~eL~~ll 217 (222)
T d2fdra1 157 SPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQDLPAVI 217 (222)
T ss_dssp CGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEESCGGGHHHHH
T ss_pred CCceEEEEcCCHHHHHHHHHcCCEEEEEccCCCCCcchHHHHHhCCCCEEECCHHHHHHHH
Confidence 568999999999999999999974 46633221 111 234899999987776553
|
| >d2b8ea2 d.220.1.1 (A:435-547) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=91.45 E-value=0.037 Score=44.01 Aligned_cols=81 Identities=23% Similarity=0.286 Sum_probs=53.4
Q ss_pred ceeeecCChhHHHHHHHHHHcCcEEEEEcCCeEEEEeCCcEEEEEEEEeeCCCCCCCeeEEEEEcCCCcEEEEEeCCchH
Q 041225 150 AIDYQGESPDEQALVSAASAYGYTLFERTSGHIVIDINGEGLRLDVLGLHEFDSVRKRMSVVIRFPDNSVKVLVKGADSS 229 (658)
Q Consensus 150 ~~~~~~~~p~e~al~~~a~~~g~~~~~~~~~~~~~~~~g~~~~~~il~~~~F~s~rk~msviv~~~~~~~~l~~KGa~e~ 229 (658)
.++..|.||..+|+++++++.+..+...++ +-.+.|++.+.+ .+ .=|.+.-
T Consensus 21 slE~~S~HPlA~AIv~~a~~~~~~~~~~~~---~~~~~G~Gi~g~-----------------------~v---~vG~~~~ 71 (113)
T d2b8ea2 21 IAERRSEHPIAEAIVKKALEHGIELGEPEK---VEVIAGEGVVAD-----------------------GI---LVGNKRL 71 (113)
T ss_dssp HHTTTCCSHHHHHHHHHHHTTTCCCCCCSC---EEEETTTEEEET-----------------------TE---EEECHHH
T ss_pred HHHCcCCCchHHHHHHHHHHhcCCCCcccc---ceeeccceEEeE-----------------------EE---EECcHHH
Confidence 445567899999999999998876544333 556778876431 11 1266665
Q ss_pred hHHhhhcCccccHHHHHHHHHHHHHHhhcCCeEEEEE
Q 041225 230 MFNILAKDSKRNDLIRHITQSHLSEYSSQGLRTLVVA 266 (658)
Q Consensus 230 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~r~l~~a 266 (658)
+.+.... +.+.+...+..+..+|.-++.++
T Consensus 72 ~~~~~~~-------~~~~~~~~~~~~~~~G~T~v~va 101 (113)
T d2b8ea2 72 MEDFGVA-------VSNEVELALEKLEREAKTAVIVA 101 (113)
T ss_dssp HHHTTCC-------CCHHHHHHHHHHHTTTCEEEEEE
T ss_pred HHhcCCC-------CCHHHHHHHHHHHhCCCeEEEEE
Confidence 5443221 23456677888999999888877
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=90.54 E-value=0.11 Score=46.14 Aligned_cols=27 Identities=19% Similarity=0.310 Sum_probs=24.0
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCC
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDK 344 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~ 344 (658)
.+.+++.+.+.+|+++|++++++|+..
T Consensus 97 ~~~~~~~~~L~~L~~~~~~~~i~s~~~ 123 (222)
T d1cr6a1 97 SINRPMLQAAIALKKKGFTTCIVTNNW 123 (222)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred CCCccHHHHHHHHHhcCCceEEeeccc
Confidence 567899999999999999999999743
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=87.79 E-value=0.83 Score=40.75 Aligned_cols=41 Identities=12% Similarity=0.155 Sum_probs=33.4
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHHHHHHHHcCccCC
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTAISIALSCKLLTP 360 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a~~ia~~~gl~~~ 360 (658)
..-+++.+++++|+ |+.+.++|+.+...+.......++...
T Consensus 93 ~~~~~~~~~L~~l~--~~~~~v~s~~~~~~~~~~~~~~~~~~~ 133 (245)
T d1qq5a_ 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDS 133 (245)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGG
T ss_pred ccchhhhHHHHHHh--hhceeEEeccchHHHHHHHhhcccccc
Confidence 56688899998885 788999999999888888888877543
|
| >d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: 5' polynucleotide kinase-3' phosphatase, middle domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=87.73 E-value=0.14 Score=44.85 Aligned_cols=46 Identities=22% Similarity=0.334 Sum_probs=35.6
Q ss_pred HHHhhhccceeeeccc----cccc-----cCCChHHHHHHHHhcCCeEEEEecCC
Q 041225 299 TAALIECDLTLLGATG----IEDK-----LQDGVPEAIEALRQAGIKVWVLTGDK 344 (658)
Q Consensus 299 ~~~~~d~DgTllg~~~----~~d~-----l~~~~~~aI~~l~~~GI~v~i~TGr~ 344 (658)
+++++|.||||+-..+ ..+. +.|++.++|+.|.++|+.++++|--+
T Consensus 22 Kia~fDrDGtLik~~~~~~~~~~~~d~~~l~~~v~~~i~~L~~~gy~iiIvTNQ~ 76 (195)
T d1yj5a1 22 KVAAFDLDGTLITTRSGKVFPTSPSDWRILYPEIPKKLQELAAEGYKLVIFTNQM 76 (195)
T ss_dssp CEEEECSBTTTEECSSSCSSCSSTTCCEESCTTHHHHHHHHHHHTCEEEEEEECH
T ss_pred cEEEEECCCceEeeCCCCcCCCChhhceeccCCHHHHHHHHHhCCcEEEEecCcc
Confidence 4567899999985422 1111 47999999999999999999999753
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=87.27 E-value=0.1 Score=46.26 Aligned_cols=29 Identities=28% Similarity=0.317 Sum_probs=24.8
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChh
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQD 346 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~ 346 (658)
.+.+++.+++..|+++|++++++|+....
T Consensus 99 ~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~ 127 (225)
T d1zd3a1 99 KINRPMLQAALMLRKKGFTTAILTNTWLD 127 (225)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCC
T ss_pred CCCccHHHHHHHHHhccCccccccccchh
Confidence 46778899999999999999999976543
|
| >d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Putative phosphatase YihX species: Escherichia coli [TaxId: 562]
Probab=87.10 E-value=0.046 Score=47.47 Aligned_cols=31 Identities=26% Similarity=0.347 Sum_probs=25.9
Q ss_pred ccCCChHHHHHHHHhcCCeEEEEecCChhHH
Q 041225 318 KLQDGVPEAIEALRQAGIKVWVLTGDKQDTA 348 (658)
Q Consensus 318 ~l~~~~~~aI~~l~~~GI~v~i~TGr~~~~a 348 (658)
.+.+++.+.+..++.+|+++.++|+.+...+
T Consensus 84 ~~~~~~~~l~~~l~~~~~~~~i~t~~~~~~~ 114 (197)
T d2b0ca1 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHT 114 (197)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCTT
T ss_pred ccCchhHHHHHHHHhcCCeEEEEeCccHHHH
Confidence 5677888999999999999999998665443
|