Citrus Sinensis ID: 041251

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210---
Protein Sequence
MQNGGDSPDVDSIHGERNRDEKYVPFDIENGSETDVSLSNIGVGGPGSFGNGNTLPPKSKTKSVVSAADVLKTLFLILMWYTFSTFLTLYNKTLLGDDMGKFPAPLLMNTVHFSMQAILSKAIIWFWSHRFQHTVSMSWRDYYVRVVPTGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLFS
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHcHHccccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHEEcc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccEcccEccccccccccccccccccccccccccccccccHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHEc
Coil and Loop (DISEMBL)
mqnggdspdvdsihgernrdekyvpfdiengsetdvslsnigvggpgsfgngntlppksktksVVSAADVLKTLFLILMWYTFSTFLTLYNKtllgddmgkfpapllmnTVHFSMQAILSKAIIWFWSHRFQHTVSMSWRDYYVRVVPTGLATAldvnlsnesLVFISVTFATMCKSASPIFLLVFAFAFrlespsiklLGIIIIISIGVLFS
Flexible Loop (DISEMBL)
mqnggdspdvdsihgernrdekyvpfdiengseTDVSLSNIGVGGPGSFGNGNTLPPKSKTKSVVSAADVLKTLFLILMWYTFSTFLTLYNKTLLGDDMGKFPAPLLMNTVHFSMQAILSKAIIWFWSHRFQHTVSMSWRDYYVRVVPTGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLEspsikllgIIIIISIGVLFS
Low Complexity Region (SEG)
MQNGGDSPDVDSIHGERNRDEKYVPFDIENGSETDVSLSnigvggpgsfgngnTLPPKSKTKSVVSAADVLKTLFLILMWYTFSTFLTLYNKTLLGDDMGKFPAPLLMNTVHFSMQAILSKAIIWFWSHRFQHTVSMSWRDYYVRVVPTGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPsikllgiiiiisigVLFS
Disordered region (IsUnstruct)
***************************************************************VVSAADVLKTLFLILMWYTFSTFLTLYNKTLLGDDMGKFPAPLLMNTVHFSMQAILSKAIIWFWSHRFQHTVSMSWRDYYVRVVPTGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF*
Disordered Region (DISOPRED)
*********************************************************************VLKTLFLILMWYTFSTFLTLYNKTLLGDDMGKFPAPLLMNTVHFSMQAILSKAIIWFWSHRFQHTVSMSWRDYYVRVVPTGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLFS
Disordered Region (DISEMBL)
**********DSIHGERNRDEKYVPFDIENGSETDVSLSNIGVGGPGSFGNGNTLPP********SAADVLKTLFLILMWYTFSTFLTLYNKTLLGDDMGKFPAPLLMNTVHFSMQAILSKAIIWFWSHRFQHTVSMSWRDYYVRVVPTGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLFS
Disordered Region (DISPRO)
*******************************************************PPKS***SVVSAADVLKTLFLILMWYTFSTFLTLYNKTLLGDDMGKFPAPLLMNTVHFSMQAILSKAIIWFWSHRFQHTVSMSWRDYYVRVVPTGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLFS
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHi
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHHoo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHi
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MQNGGDSPDVDSIHGERNRDEKYVPFDIENGSETDVSLSNIGVGGPGSFGNGNTLPPKSKTKSVVSAADVLKTLFLILMWYTFSTFLTLYNKTLLGDDMGKFPAPLLMNTVHFSMQAILSKAIIWFWSHRFQHTVSMSWRDYYVRVVPTGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLFS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	213	2.2.26 [Sep-21-2011]
Q8H184	414	Probable sugar phosphate/	yes	no	0.910	0.468	0.666	3e-70
Q9NQQ7	365	Solute carrier family 35	yes	no	0.619	0.361	0.404	2e-19
Q8VCX2	364	Solute carrier family 35	yes	no	0.619	0.362	0.404	4e-19
Q10354	374	Uncharacterized transport	yes	no	0.666	0.379	0.335	6e-11
Q3E6T0	349	Probable sugar phosphate/	no	no	0.615	0.375	0.311	6e-08
Q9SUV2	350	Probable sugar phosphate/	no	no	0.615	0.374	0.303	1e-07
Q03697	442	Putative nucleotide-sugar	yes	no	0.647	0.312	0.306	1e-07
Q9C8M1	332	Probable sugar phosphate/	no	no	0.633	0.406	0.289	2e-07
Q94EI9	340	Probable sugar phosphate/	no	no	0.619	0.388	0.297	2e-07
Q9LFN3	351	Probable sugar phosphate/	no	no	0.619	0.376	0.291	2e-07

>sp|Q8H184|PT106_ARATH Probable sugar phosphate/phosphate translocator At1g06470 OS=Arabidopsis thaliana GN=At1g06470 PE=2 SV=1

 Score =  264 bits (674), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 136/204 (66%), Positives = 163/204 (79%), Gaps = 10/204 (4%)

Query: 14  HGERNRDEKYVPFDIEN--GSETDVSLS-NIGVGGPGSFGNGNTLPPKSKTKSV-VSAAD 69
            G+ +R++    F IEN  G ET+ S S ++G      + +G+TL    K   V +S AD
Sbjct: 18  EGDVDREQVLETFGIENETGKETNGSRSFDVG------YSSGDTLETLPKASKVDISPAD 71

Query: 70  VLKTLFLILMWYTFSTFLTLYNKTLLGDDMGKFPAPLLMNTVHFSMQAILSKAIIWFWSH 129
           VLKTLF IL+WYTFSTFLTLYNKTLLGDD+GKFPAPLLMNT+HFS+QA+LSK I W+WS 
Sbjct: 72  VLKTLFFILVWYTFSTFLTLYNKTLLGDDLGKFPAPLLMNTIHFSIQAVLSKMITWYWSG 131

Query: 130 RFQHTVSMSWRDYYVRVVPTGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFA 189
           RFQ  V++SWRDY+VRVVPT L TA+D+NLSNESLVFISVTFATMCKSA+PIFLL+FAFA
Sbjct: 132 RFQPDVTISWRDYFVRVVPTALGTAMDINLSNESLVFISVTFATMCKSAAPIFLLLFAFA 191

Query: 190 FRLESPSIKLLGIIIIISIGVLFS 213
           FRLESPS+KL GII +IS GVL +
Sbjct: 192 FRLESPSLKLFGIISVISAGVLLT 215

Arabidopsis thaliana (taxid: 3702)

>sp|Q9NQQ7|S35C2_HUMAN Solute carrier family 35 member C2 OS=Homo sapiens GN=SLC35C2 PE=1 SV=2

 Score = 95.5 bits (236), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 57/141 (40%), Positives = 89/141 (63%), Gaps = 9/141 (6%)

Query: 73  TLFLILMWYTFSTFLTLYNKTLLGDDMGKFPAPLLMNTVHFS---MQAILSKAIIWFWSH 129
           TL L+L++Y FS  +T YNK L       F  PL M  +H +   + + LS+A++   SH
Sbjct: 17  TLGLVLLYYCFSIGITFYNKWL----TKSFHFPLFMTMLHLAVIFLFSALSRALVQCSSH 72

Query: 130 RFQHTVSMSWRDYYVRVVPTGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFA 189
           R +  V +SW DY  RV PT LATALDV LSN S ++++V+  TM KS++ +F+L+F+  
Sbjct: 73  RAR--VVLSWADYLRRVAPTALATALDVGLSNWSFLYVTVSLYTMTKSSAVLFILIFSLI 130

Query: 190 FRLESPSIKLLGIIIIISIGV 210
           F+LE     L+ ++++I+ G+
Sbjct: 131 FKLEELRAALVLVVLLIAGGL 151

May play an important role in the cellular response to tissue hypoxia.

Homo sapiens (taxid: 9606)

>sp|Q8VCX2|S35C2_MOUSE Solute carrier family 35 member C2 OS=Mus musculus GN=Slc35c2 PE=1 SV=1

 Score = 94.7 bits (234), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 57/141 (40%), Positives = 89/141 (63%), Gaps = 9/141 (6%)

Query: 73  TLFLILMWYTFSTFLTLYNKTLLGDDMGKFPAPLLMNTVHFS---MQAILSKAIIWFWSH 129
           TL L+L++Y FS  +T YNK L       F  PL M  +H +   + + LS+A++   SH
Sbjct: 17  TLGLVLLYYCFSIGITFYNKWL----TKSFHFPLFMTMLHLAVIFLFSALSRALVQCSSH 72

Query: 130 RFQHTVSMSWRDYYVRVVPTGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFA 189
           + +  V +SW DY  RV PT LATALDV LSN S ++I+V+  TM KS++ +F+L+F+  
Sbjct: 73  KAR--VVLSWTDYLRRVAPTALATALDVGLSNWSFLYITVSLYTMTKSSAVLFILIFSLI 130

Query: 190 FRLESPSIKLLGIIIIISIGV 210
           F+LE     L+ ++++I+ G+
Sbjct: 131 FKLEELRAALVLVVLLIAGGL 151

May play an important role in the cellular response to tissue hypoxia.

Mus musculus (taxid: 10090)

>sp|Q10354|YDB1_SCHPO Uncharacterized transporter C22E12.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC22E12.01 PE=3 SV=2

 Score = 67.4 bits (163), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 48/143 (33%), Positives = 79/143 (55%), Gaps = 1/143 (0%)

Query: 70  VLKTLFLILMWYTFSTFLTLYNKTLLGDDMGKFPAPLLMNTVHFSMQAILSK-AIIWFWS 128
           V+  + ++L WY FS  L++ NK +  +    F  PL +++    +Q   +K  I+ F  
Sbjct: 50  VVIIVLIVLAWYFFSLLLSMMNKWIFSESKMDFQFPLFLSSCQMLVQMGFAKLTILAFPR 109

Query: 129 HRFQHTVSMSWRDYYVRVVPTGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAF 188
           ++     + SW +Y+ R     L T LD+ LSN SL  I+++F TMC+S+  IF+  F+ 
Sbjct: 110 YQPNKKDNFSWLEYFYRAGICALVTGLDIGLSNASLETITLSFYTMCRSSILIFVFFFSV 169

Query: 189 AFRLESPSIKLLGIIIIISIGVL 211
            FR+E     LL I ++IS GV+
Sbjct: 170 IFRIEMFDWILLCITLVISAGVV 192

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|Q3E6T0|PT525_ARATH Probable sugar phosphate/phosphate translocator At5g25400 OS=Arabidopsis thaliana GN=At5g25400 PE=2 SV=1

 Score = 57.8 bits (138), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 72/135 (53%), Gaps = 4/135 (2%)

Query: 77  ILMWYTFSTFLTLYNKTLLGDDMGKFPAPLLMNTVHFSMQAILSKAIIWFWSHRFQHTVS 136
           + +W   S  + +YNK +L   M  +P P+ +  +H S  + L+  +I  +  +F   VS
Sbjct: 22  VAIWIFLSFTVIVYNKYILDKKMYDWPFPISLTMIHMSFCSTLAFLLIKVF--KFVEPVS 79

Query: 137 MSWRDYYVR-VVPTGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESP 195
           MS RD Y+R VVP G   +L + LSN + +++SV+F  M K+  P+ +      F+ E  
Sbjct: 80  MS-RDTYLRSVVPIGALYSLSLWLSNSAYIYLSVSFIQMLKALMPVAVYSIGVLFKKEGF 138

Query: 196 SIKLLGIIIIISIGV 210
             + +  ++ IS GV
Sbjct: 139 KSETMMNMLSISFGV 153

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SUV2|PT432_ARATH Probable sugar phosphate/phosphate translocator At4g32390 OS=Arabidopsis thaliana GN=At4g32390 PE=3 SV=1

 Score = 57.0 bits (136), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 70/135 (51%), Gaps = 4/135 (2%)

Query: 77  ILMWYTFSTFLTLYNKTLLGDDMGKFPAPLLMNTVHFSMQAILSKAIIWFWSHRFQHTVS 136
           + +W   S  + +YNK +L   M  +P P+ +  +H +  +  S A+I     +    VS
Sbjct: 22  VAIWIFLSFTVIVYNKYILDKKMYNWPFPITLTMIHMAFCS--SLAVILIKVFKIVEPVS 79

Query: 137 MSWRDYYVR-VVPTGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESP 195
           MS RD Y+R VVP G   +L + LSN + +++SV+F  M K+  P+ +       + ES 
Sbjct: 80  MS-RDTYIRSVVPIGALYSLSLWLSNSAYIYLSVSFIQMLKALMPVAVYSIGVLLKKESF 138

Query: 196 SIKLLGIIIIISIGV 210
             + +  ++ IS GV
Sbjct: 139 KSETMTNMLSISFGV 153

Arabidopsis thaliana (taxid: 3702)

>sp|Q03697|YMD8_YEAST Putative nucleotide-sugar transporter YMD8 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YMD8 PE=1 SV=1

 Score = 56.2 bits (134), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/147 (30%), Positives = 78/147 (53%), Gaps = 9/147 (6%)

Query: 72  KTLFL--ILMWYTFSTFLTLYNKTLL--GDDMGKFPAPLLMNTVHFSMQAILSKAIIWFW 127
           +T+FL  +  WY  S  L++YN+ +    D +G    P+L+ T H +   +LS   I   
Sbjct: 3   RTVFLAFVFGWYFCSIALSIYNRWMFDPKDGLG-IGYPVLVTTFHQATLWLLSGIYIKLR 61

Query: 128 SHRFQHTVS----MSWRDYYVRVVPTGLATALDVNLSNESLVFISVTFATMCKSASPIFL 183
               ++ +      +W  +   ++PT +A+A D+ LSN S  ++ +T  T+ KS+S  F+
Sbjct: 62  HKPVKNVLRKNNGFNWSFFLKFLLPTAVASAGDIGLSNVSFQYVPLTIYTIIKSSSIAFV 121

Query: 184 LVFAFAFRLESPSIKLLGIIIIISIGV 210
           L+F   F+LE    KL   +II+ +GV
Sbjct: 122 LLFGCIFKLEKFHWKLALSVIIMFVGV 148

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|Q9C8M1|PT153_ARATH Probable sugar phosphate/phosphate translocator At1g53660 OS=Arabidopsis thaliana GN=At1g53660 PE=3 SV=2

 Score = 56.2 bits (134), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 69/138 (50%), Gaps = 3/138 (2%)

Query: 77  ILMWYTFSTFLTLYNKTLLGDDMGKFPAPLLMNTVHFSMQAILSKAII-WFWSHRFQHTV 135
           IL++ T S+    +NK +L      FP PL +  +H +  ++L   +   F   + +   
Sbjct: 21  ILLYITLSSGQIFFNKWVLSSKEINFPYPLGLTLLHMTFSSVLCFLLTKVFKVMKVEE-- 78

Query: 136 SMSWRDYYVRVVPTGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESP 195
            M+   Y   V+P G   A+ + L N + ++I+V F+ M K+  P+ + +      LE  
Sbjct: 79  GMTLEIYVTSVIPIGAMFAMTLWLGNTAYLYITVAFSQMLKAIMPVAVFILGVCVGLEIM 138

Query: 196 SIKLLGIIIIISIGVLFS 213
           S K+L I+ +IS GVL S
Sbjct: 139 SCKMLLIMSVISFGVLVS 156

Arabidopsis thaliana (taxid: 3702)

>sp|Q94EI9|PT314_ARATH Probable sugar phosphate/phosphate translocator At3g14410 OS=Arabidopsis thaliana GN=At3g14410 PE=2 SV=1

 Score = 55.8 bits (133), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 67/141 (47%), Gaps = 9/141 (6%)

Query: 77  ILMWYTFSTFLTLYNKTLLGDDMGKFPAPLLMNTVHFSMQAILSKAIIWFWSHRFQHTVS 136
           IL++   S+    +NK +L      FP PL +  +H    ++L      F   +    V 
Sbjct: 19  ILLYIALSSGQIFFNKWVLSSKEINFPYPLGLTLLHMIFSSVLC-----FLLTKVLKIVK 73

Query: 137 ----MSWRDYYVRVVPTGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRL 192
               M+   Y   V+P G   A+ + L N + ++ISV FA M K+  P+ + +   A  L
Sbjct: 74  VEEGMTLEIYVTSVIPIGAMFAMTLWLGNTAYLYISVAFAQMLKAIMPVAVFILGVAAGL 133

Query: 193 ESPSIKLLGIIIIISIGVLFS 213
           E  S ++L I+ IIS GVL +
Sbjct: 134 EMMSCRMLLIMSIISFGVLVA 154

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LFN3|PT511_ARATH Probable sugar phosphate/phosphate translocator At5g11230 OS=Arabidopsis thaliana GN=At5g11230 PE=2 SV=1

 Score = 55.8 bits (133), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 66/134 (49%), Gaps = 2/134 (1%)

Query: 77  ILMWYTFSTFLTLYNKTLLGDDMGKFPAPLLMNTVHFSMQAILSKAIIWFWSHRFQHTVS 136
           + +W   S  + +YNK +L   M  +P P+ +  +H S  + L+  II  +  +F   V 
Sbjct: 22  VAIWIFLSFTVIVYNKYILDKKMYNWPFPISLTMIHMSFCSTLAFLIIKVF--KFVEPVK 79

Query: 137 MSWRDYYVRVVPTGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPS 196
           M+   Y   VVP G   AL + LSN + +++SV+F  M K+  P+ +      F+ E   
Sbjct: 80  MTRETYLRSVVPIGALYALSLWLSNSAYIYLSVSFIQMLKALMPVAVYSIGVLFKKEGFK 139

Query: 197 IKLLGIIIIISIGV 210
              +  ++ IS GV
Sbjct: 140 SDTMMNMLSISFGV 153

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	213
255569841	519	Triose phosphate/phosphate translocator,	0.938	0.385	0.737	2e-78
359485471	510	PREDICTED: probable sugar phosphate/phos	0.920	0.384	0.712	3e-74
297843448	414	hypothetical protein ARALYDRAFT_887850 [	0.990	0.509	0.652	1e-70
356567380	499	PREDICTED: probable sugar phosphate/phos	0.953	0.406	0.643	2e-69
28059199	414	integral membrane protein, putative [Ara	0.910	0.468	0.666	2e-68
30679695	414	nucleotide/sugar transporter-like protei	0.910	0.468	0.666	2e-68
224121440	409	predicted protein [Populus trichocarpa]	0.948	0.493	0.609	8e-68
358349238	603	Solute carrier family 35 member C2 [Medi	0.953	0.336	0.624	6e-66
302143479	529	unnamed protein product [Vitis vinifera]	0.779	0.313	0.732	9e-64
449481103	408	PREDICTED: LOW QUALITY PROTEIN: probable	0.967	0.504	0.582	9e-61

>gi|255569841|ref|XP_002525884.1| Triose phosphate/phosphate translocator, non-green plastid, chloroplast precursor, putative [Ricinus communis] gi|223534798|gb|EEF36488.1| Triose phosphate/phosphate translocator, non-green plastid, chloroplast precursor, putative [Ricinus communis]

 Score =  297 bits (760), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 149/202 (73%), Positives = 166/202 (82%), Gaps = 2/202 (0%)

Query: 12  SIHGERNRDEKYVPFDIENGSETDVSLSNIGVGGPGSFGNGNTLPPKSKTKSVVSAADVL 71
           +IH      E YVPFDIENGS  ++  SN       S      LPPKS+  S VS ADVL
Sbjct: 120 NIHNRGKEKENYVPFDIENGSSAEMLSSNTSDDCANSSYIPERLPPKSE--SPVSPADVL 177

Query: 72  KTLFLILMWYTFSTFLTLYNKTLLGDDMGKFPAPLLMNTVHFSMQAILSKAIIWFWSHRF 131
           KTLF IL+WYTFSTFLTLYNKTLLGDD+GKFPAPLLMNTVHFSMQA+LSK I WFWSHRF
Sbjct: 178 KTLFFILVWYTFSTFLTLYNKTLLGDDLGKFPAPLLMNTVHFSMQAVLSKFITWFWSHRF 237

Query: 132 QHTVSMSWRDYYVRVVPTGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFR 191
           Q TV+M+W+DY+VRVVPT L TALDVNLSN SLVFISVTFATMCKSA+PIFLL+FAFAFR
Sbjct: 238 QVTVTMTWKDYFVRVVPTALGTALDVNLSNASLVFISVTFATMCKSAAPIFLLLFAFAFR 297

Query: 192 LESPSIKLLGIIIIISIGVLFS 213
           LESPSIKLLGII++IS+GVL +
Sbjct: 298 LESPSIKLLGIIMVISVGVLLT 319

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359485471|ref|XP_002277992.2| PREDICTED: probable sugar phosphate/phosphate translocator At1g06470-like [Vitis vinifera]

 Score =  283 bits (724), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 141/198 (71%), Positives = 157/198 (79%), Gaps = 2/198 (1%)

Query: 3   NGGDSPDVDSIHGERNRDEKYVPFDIENGSETDVSLSNIGVGGPGSFGNGNTLPPKSKTK 62
           NGG++ D  SIH   N +EKYVPFDIE+  E ++  SNIGV G  S GN     P S   
Sbjct: 95  NGGNTMDGSSIHVRGNGNEKYVPFDIEDKPEREIDFSNIGVDGSNSNGNHEMSSPNSNNS 154

Query: 63  SVVSAADVLKTLFLILMWYTFSTFLTLYNKTLLGDDMGKFPAPLLMNTVHFSMQAILSKA 122
             +    +LKTLF IL+WYTFST LTLYNKTLLGDD+G+FPAPLLMNTVHF MQAILSKA
Sbjct: 155 --IDVVSLLKTLFFILVWYTFSTILTLYNKTLLGDDLGRFPAPLLMNTVHFLMQAILSKA 212

Query: 123 IIWFWSHRFQHTVSMSWRDYYVRVVPTGLATALDVNLSNESLVFISVTFATMCKSASPIF 182
           I  FWS RFQ +V+MSWRDY+VRVVPT L TALD+NLSN SLVFISVTFATMCKSASPIF
Sbjct: 213 ITCFWSQRFQPSVTMSWRDYFVRVVPTALGTALDINLSNASLVFISVTFATMCKSASPIF 272

Query: 183 LLVFAFAFRLESPSIKLL 200
           LL+FAFAFRLESPSIKLL
Sbjct: 273 LLIFAFAFRLESPSIKLL 290

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297843448|ref|XP_002889605.1| hypothetical protein ARALYDRAFT_887850 [Arabidopsis lyrata subsp. lyrata] gi|297335447|gb|EFH65864.1| hypothetical protein ARALYDRAFT_887850 [Arabidopsis lyrata subsp. lyrata]

 Score =  271 bits (694), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 139/213 (65%), Positives = 166/213 (77%), Gaps = 2/213 (0%)

Query: 1   MQNGGDSPDVDSIHGERNRDEKYVPFDIENGSETDVSLSNIGVGGPGSFGNGNTLPPKSK 60
           +Q  G + +  S   + +R++   PFDIEN +  + + S     G  S  N  TLP  SK
Sbjct: 5   VQLRGGTIEAISNQVDVDREQVLEPFDIENETGKETNGSRSFDVGYSSGDNLETLPKASK 64

Query: 61  TKSVVSAADVLKTLFLILMWYTFSTFLTLYNKTLLGDDMGKFPAPLLMNTVHFSMQAILS 120
           T   +S ADVLKTLF IL+WYTFSTFLTLYNKTLLGDD+GKFPAPLLMNT+HFS+QA+LS
Sbjct: 65  TD--ISPADVLKTLFFILVWYTFSTFLTLYNKTLLGDDLGKFPAPLLMNTIHFSIQAVLS 122

Query: 121 KAIIWFWSHRFQHTVSMSWRDYYVRVVPTGLATALDVNLSNESLVFISVTFATMCKSASP 180
           K I W+WS RFQ  V++SWRDY+VRVVPT L TA+D+NLSNESLVFISVTFATMCKSA+P
Sbjct: 123 KMITWYWSGRFQPDVTISWRDYFVRVVPTALGTAMDINLSNESLVFISVTFATMCKSAAP 182

Query: 181 IFLLVFAFAFRLESPSIKLLGIIIIISIGVLFS 213
           IFLL+FAFAFRLESPS+KL GII +IS GVL +
Sbjct: 183 IFLLLFAFAFRLESPSLKLFGIISVISAGVLLT 215

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356567380|ref|XP_003551898.1| PREDICTED: probable sugar phosphate/phosphate translocator At1g06470-like [Glycine max]

 Score =  267 bits (683), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 137/213 (64%), Positives = 161/213 (75%), Gaps = 10/213 (4%)

Query: 3   NGGDSPDVDSIHGERNRDEKYVPFDIENGSE--TDVSLSNIGVGGPGSFGNGNTLPPKSK 60
           NG  + D DS+H   N  EKYV FDIE+ SE  T    S I VGG GS G     P    
Sbjct: 96  NGIGTMDDDSVHRRGNGSEKYVSFDIEDKSERGTKGVDSYISVGGDGSLGKSFQNP---- 151

Query: 61  TKSVVSAADVLKTLFLILMWYTFSTFLTLYNKTLLGDDMGKFPAPLLMNTVHFSMQAILS 120
               + AA++LKTLFLILMWYT S FLTLYNK+LLGD MGKFP P LMNT+HF+MQA+LS
Sbjct: 152 ----IHAANILKTLFLILMWYTSSLFLTLYNKSLLGDHMGKFPPPFLMNTIHFTMQAVLS 207

Query: 121 KAIIWFWSHRFQHTVSMSWRDYYVRVVPTGLATALDVNLSNESLVFISVTFATMCKSASP 180
           K I WFWSH+F+  V +SW DY++RVVPT   TA+DVNLSN SLVFISVTFATMCKSA+P
Sbjct: 208 KFITWFWSHKFETNVVISWGDYFLRVVPTAFGTAMDVNLSNASLVFISVTFATMCKSAAP 267

Query: 181 IFLLVFAFAFRLESPSIKLLGIIIIISIGVLFS 213
           IFLL+FAFAFRLE+PS+KL GII+IIS+G+L +
Sbjct: 268 IFLLLFAFAFRLETPSVKLSGIILIISVGILLT 300

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|28059199|gb|AAO30035.1| integral membrane protein, putative [Arabidopsis thaliana]

 Score =  264 bits (675), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 136/204 (66%), Positives = 163/204 (79%), Gaps = 10/204 (4%)

Query: 14  HGERNRDEKYVPFDIEN--GSETDVSLS-NIGVGGPGSFGNGNTLPPKSKTKSV-VSAAD 69
            G+ +R++    F IEN  G ET+ S S ++G      + +G+TL    K   V +S AD
Sbjct: 18  EGDVDREQVLETFGIENETGKETNGSRSFDVG------YSSGDTLETLPKASKVDISPAD 71

Query: 70  VLKTLFLILMWYTFSTFLTLYNKTLLGDDMGKFPAPLLMNTVHFSMQAILSKAIIWFWSH 129
           VLKTLF IL+WYTFSTFLTLYNKTLLGDD+GKFPAPLLMNT+HFS+QA+LSK I W+WS 
Sbjct: 72  VLKTLFFILVWYTFSTFLTLYNKTLLGDDLGKFPAPLLMNTIHFSIQAVLSKMITWYWSG 131

Query: 130 RFQHTVSMSWRDYYVRVVPTGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFA 189
           RFQ  V++SWRDY+VRVVPT L TA+D+NLSNESLVFISVTFATMCKSA+PIFLL+FAFA
Sbjct: 132 RFQPDVTISWRDYFVRVVPTALGTAMDINLSNESLVFISVTFATMCKSAAPIFLLLFAFA 191

Query: 190 FRLESPSIKLLGIIIIISIGVLFS 213
           FRLESPS+KL GII +IS GVL +
Sbjct: 192 FRLESPSLKLFGIISVISAGVLLT 215

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30679695|ref|NP_172135.2| nucleotide/sugar transporter-like protein [Arabidopsis thaliana] gi|42571363|ref|NP_973772.1| nucleotide/sugar transporter-like protein [Arabidopsis thaliana] gi|75151898|sp|Q8H184.1|PT106_ARATH RecName: Full=Probable sugar phosphate/phosphate translocator At1g06470 gi|23306366|gb|AAN17410.1| integral membrane protein, putative [Arabidopsis thaliana] gi|332189869|gb|AEE27990.1| nucleotide/sugar transporter-like protein [Arabidopsis thaliana] gi|332189870|gb|AEE27991.1| nucleotide/sugar transporter-like protein [Arabidopsis thaliana]

 Score =  264 bits (674), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 136/204 (66%), Positives = 163/204 (79%), Gaps = 10/204 (4%)

Query: 14  HGERNRDEKYVPFDIEN--GSETDVSLS-NIGVGGPGSFGNGNTLPPKSKTKSV-VSAAD 69
            G+ +R++    F IEN  G ET+ S S ++G      + +G+TL    K   V +S AD
Sbjct: 18  EGDVDREQVLETFGIENETGKETNGSRSFDVG------YSSGDTLETLPKASKVDISPAD 71

Query: 70  VLKTLFLILMWYTFSTFLTLYNKTLLGDDMGKFPAPLLMNTVHFSMQAILSKAIIWFWSH 129
           VLKTLF IL+WYTFSTFLTLYNKTLLGDD+GKFPAPLLMNT+HFS+QA+LSK I W+WS 
Sbjct: 72  VLKTLFFILVWYTFSTFLTLYNKTLLGDDLGKFPAPLLMNTIHFSIQAVLSKMITWYWSG 131

Query: 130 RFQHTVSMSWRDYYVRVVPTGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFA 189
           RFQ  V++SWRDY+VRVVPT L TA+D+NLSNESLVFISVTFATMCKSA+PIFLL+FAFA
Sbjct: 132 RFQPDVTISWRDYFVRVVPTALGTAMDINLSNESLVFISVTFATMCKSAAPIFLLLFAFA 191

Query: 190 FRLESPSIKLLGIIIIISIGVLFS 213
           FRLESPS+KL GII +IS GVL +
Sbjct: 192 FRLESPSLKLFGIISVISAGVLLT 215

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224121440|ref|XP_002330828.1| predicted protein [Populus trichocarpa] gi|222872630|gb|EEF09761.1| predicted protein [Populus trichocarpa]

 Score =  262 bits (669), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 131/215 (60%), Positives = 164/215 (76%), Gaps = 13/215 (6%)

Query: 3   NGGDSPDVDSIHGERNRDEKYVPFDIEN----GSETDVSLSNIGVGGPGSFGNGNTLPPK 58
           NG +  + +    + + ++K VPFDIEN     S+ D  ++ I +         ++L  K
Sbjct: 4   NGCNLENRNRGSHDDSEEDKCVPFDIENSRRRNSDVDSDVNGIAM---------DSLSVK 54

Query: 59  SKTKSVVSAADVLKTLFLILMWYTFSTFLTLYNKTLLGDDMGKFPAPLLMNTVHFSMQAI 118
               + VSAAD+LKTLF IL+WYTFSTFLTLYNKTLLGDDMG+FPAPLLMNT HF+MQA+
Sbjct: 55  KSPPTPVSAADILKTLFFILVWYTFSTFLTLYNKTLLGDDMGRFPAPLLMNTFHFTMQAV 114

Query: 119 LSKAIIWFWSHRFQHTVSMSWRDYYVRVVPTGLATALDVNLSNESLVFISVTFATMCKSA 178
           LS AI W+WS RF+  V+MSW+DY++RVVPT L TA DVNLSN SLVFISVTFATMCKSA
Sbjct: 115 LSTAITWYWSDRFRPNVAMSWKDYFIRVVPTALGTAFDVNLSNVSLVFISVTFATMCKSA 174

Query: 179 SPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLFS 213
           +PIFL++FAFAFRLESPS KL GII++IS+G+L +
Sbjct: 175 APIFLILFAFAFRLESPSAKLFGIIMVISVGILLT 209

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358349238|ref|XP_003638646.1| Solute carrier family 35 member C2 [Medicago truncatula] gi|355504581|gb|AES85784.1| Solute carrier family 35 member C2 [Medicago truncatula]

 Score =  256 bits (653), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 133/213 (62%), Positives = 158/213 (74%), Gaps = 10/213 (4%)

Query: 3   NGGDSPDVDSIHGERNRDEKYVPFDIENGSE--TDVSLSNIGVGGPGSFGNGNTLPPKSK 60
           NG  + D DS++   N  EKYVPFDIE+  E  T    S    GG GS            
Sbjct: 105 NGASAMDDDSVYRRGNGSEKYVPFDIEDSPERGTVGGDSYDSGGGVGSL--------HKS 156

Query: 61  TKSVVSAADVLKTLFLILMWYTFSTFLTLYNKTLLGDDMGKFPAPLLMNTVHFSMQAILS 120
           +++ V  A++LKT+F I +WYTFS FLTLYNK+LLGD MGKFPAP LMNTVHF MQA+LS
Sbjct: 157 SENTVPVANILKTMFFIFVWYTFSLFLTLYNKSLLGDHMGKFPAPFLMNTVHFVMQAVLS 216

Query: 121 KAIIWFWSHRFQHTVSMSWRDYYVRVVPTGLATALDVNLSNESLVFISVTFATMCKSASP 180
           K I +FWSH+F+  V MSWRDY++RVVPT L TA+DVNLSN SLVFISVTFATMCKSA+P
Sbjct: 217 KFITYFWSHKFETNVVMSWRDYFLRVVPTALGTAMDVNLSNASLVFISVTFATMCKSAAP 276

Query: 181 IFLLVFAFAFRLESPSIKLLGIIIIISIGVLFS 213
           IFLL+FAFAFRLE PS KL GII++ISIG+L +
Sbjct: 277 IFLLLFAFAFRLEVPSFKLSGIILVISIGILLT 309

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302143479|emb|CBI22040.3| unnamed protein product [Vitis vinifera]

 Score =  248 bits (634), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 123/168 (73%), Positives = 136/168 (80%), Gaps = 2/168 (1%)

Query: 33  ETDVSLSNIGVGGPGSFGNGNTLPPKSKTKSVVSAADVLKTLFLILMWYTFSTFLTLYNK 92
           + ++  SNIGV G  S GN     P S     +    +LKTLF IL+WYTFST LTLYNK
Sbjct: 144 QQEIDFSNIGVDGSNSNGNHEMSSPNSNNS--IDVVSLLKTLFFILVWYTFSTILTLYNK 201

Query: 93  TLLGDDMGKFPAPLLMNTVHFSMQAILSKAIIWFWSHRFQHTVSMSWRDYYVRVVPTGLA 152
           TLLGDD+G+FPAPLLMNTVHF MQAILSKAI  FWS RFQ +V+MSWRDY+VRVVPT L 
Sbjct: 202 TLLGDDLGRFPAPLLMNTVHFLMQAILSKAITCFWSQRFQPSVTMSWRDYFVRVVPTALG 261

Query: 153 TALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLL 200
           TALD+NLSN SLVFISVTFATMCKSASPIFLL+FAFAFRLESPSIKLL
Sbjct: 262 TALDINLSNASLVFISVTFATMCKSASPIFLLIFAFAFRLESPSIKLL 309

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449481103|ref|XP_004156082.1| PREDICTED: LOW QUALITY PROTEIN: probable sugar phosphate/phosphate translocator At1g06470-like [Cucumis sativus]

 Score =  238 bits (608), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 123/211 (58%), Positives = 150/211 (71%), Gaps = 5/211 (2%)

Query: 3   NGGDSPDVDSIHGERNRDEKYVPFDIENGSETDVSLSNIGVGGPGSFGNGNTLPPKSKTK 62
           N G++     IH +    E+Y P  IEN         N       SF + N    +   K
Sbjct: 4   NDGETDAHFPIHVDGIGPEEYEPLSIENKLG-----RNFNGDDCESFHSDNYNSLQLDAK 58

Query: 63  SVVSAADVLKTLFLILMWYTFSTFLTLYNKTLLGDDMGKFPAPLLMNTVHFSMQAILSKA 122
           + +S A+VLKTLF +L+WYTFS  LTLYNK+LLGD +G+FPAPLLMNTVHF+MQA+LS  
Sbjct: 59  NPLSTANVLKTLFFVLVWYTFSLLLTLYNKSLLGDHLGRFPAPLLMNTVHFTMQAVLSNL 118

Query: 123 IIWFWSHRFQHTVSMSWRDYYVRVVPTGLATALDVNLSNESLVFISVTFATMCKSASPIF 182
           I W WS RFQ  V+M+WRDY+ +VVPT L TALDVNLSN SLV ISVTFATMCKS SPIF
Sbjct: 119 ITWIWSSRFQSCVTMTWRDYFTKVVPTALGTALDVNLSNASLVSISVTFATMCKSGSPIF 178

Query: 183 LLVFAFAFRLESPSIKLLGIIIIISIGVLFS 213
           LL+FAFAFRLE+PS +L GII+IIS+G+L +
Sbjct: 179 LLLFAFAFRLEAPSYRLAGIILIISVGILLT 209

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	213
TAIR|locus:2009190	414	AT1G06470 [Arabidopsis thalian	0.854	0.439	0.657	6.4e-60
ASPGD|ASPL0000010621	582	AN3948 [Emericella nidulans (t	0.633	0.231	0.423	4.7e-20
UNIPROTKB|I3LL24	364	SLC35C2 "Uncharacterized prote	0.539	0.315	0.443	9.5e-20
UNIPROTKB|E2RPV5	368	SLC35C2 "Uncharacterized prote	0.539	0.312	0.443	1e-19
UNIPROTKB|Q9NQQ7	365	SLC35C2 "Solute carrier family	0.539	0.315	0.435	1.3e-19
UNIPROTKB|F5H4T9	394	SLC35C2 "Solute carrier family	0.539	0.291	0.435	2.1e-19
MGI|MGI:2385166	364	Slc35c2 "solute carrier family	0.539	0.315	0.435	2.2e-19
UNIPROTKB|G4MY36	602	MGG_11246 "Nucleotide-sugar tr	0.295	0.104	0.515	6.9e-18
ZFIN|ZDB-GENE-030131-2202	1897	slc35c2 "solute carrier family	0.558	0.062	0.382	5.1e-17
POMBASE|SPAC22E12.01	374	SPAC22E12.01 "triose phosphate	0.582	0.331	0.328	4.1e-14

TAIR|locus:2009190 AT1G06470 [Arabidopsis thaliana (taxid:3702)]

 Score = 614 (221.2 bits), Expect = 6.4e-60, P = 6.4e-60
 Identities = 121/184 (65%), Positives = 142/184 (77%)

Query:    12 SIHGERNRDEKYVPFDIENGSETDVSLSXXXXXXXXXXXXXXTLPPKSKTKSVVSAADVL 71
             S  G+ +R++    F IEN +  + + S              TLP  SK    +S ADVL
Sbjct:    16 SNEGDVDREQVLETFGIENETGKETNGSRSFDVGYSSGDTLETLPKASKVD--ISPADVL 73

Query:    72 KTLFLILMWYTFSTFLTLYNKTLLGDDMGKFPAPLLMNTVHFSMQAILSKAIIWFWSHRF 131
             KTLF IL+WYTFSTFLTLYNKTLLGDD+GKFPAPLLMNT+HFS+QA+LSK I W+WS RF
Sbjct:    74 KTLFFILVWYTFSTFLTLYNKTLLGDDLGKFPAPLLMNTIHFSIQAVLSKMITWYWSGRF 133

Query:   132 QHTVSMSWRDYYVRVVPTGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFR 191
             Q  V++SWRDY+VRVVPT L TA+D+NLSNESLVFISVTFATMCKSA+PIFLL+FAFAFR
Sbjct:   134 QPDVTISWRDYFVRVVPTALGTAMDINLSNESLVFISVTFATMCKSAAPIFLLLFAFAFR 193

Query:   192 LESP 195
             LESP
Sbjct:   194 LESP 197

GO:0005886 "plasma membrane" evidence=ISM

GO:0016020 "membrane" evidence=IEA;ISS

GO:0006863 "purine nucleobase transport" evidence=RCA

ASPGD|ASPL0000010621 AN3948 [Emericella nidulans (taxid:162425)]

 Score = 246 (91.7 bits), Expect = 4.7e-20, P = 4.7e-20
 Identities = 64/151 (42%), Positives = 93/151 (61%)

Query:    59 SKTKSVVSAADVLKTLFLILMWYTFSTFLTLYNKTLLG-DDMGK--FPAPLLMNTVHFSM 115
             S  ++V+S   +L  + LIL+WY FS  +++YNK +   D+  K  FP PL   ++H  +
Sbjct:   114 SADRTVISR--LLVNVGLILLWYFFSLAISIYNKWMFSRDENDKEVFPFPLFTTSLHMLV 171

Query:   116 QAILSKAIIWFW-SHRFQHTVSMS---------WRDYYV-RVVPTGLATALDVNLSNESL 164
             Q  LS  I++F  S R Q T S S          + +Y+ R+VP G AT+LD+ L N SL
Sbjct:   172 QFTLSSLILFFIPSLRPQPTPSPSPDVEAKPVLTQFFYLTRLVPCGAATSLDIGLGNMSL 231

Query:   165 VFISVTFATMCKSASPIFLLVFAFAFRLESP 195
              FI++TF TMCKS++  F+L+FAF FRLE+P
Sbjct:   232 KFITLTFLTMCKSSALAFVLIFAFVFRLETP 262

GO:0008150 "biological_process" evidence=ND

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

UNIPROTKB|I3LL24 SLC35C2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 236 (88.1 bits), Expect = 9.5e-20, P = 9.5e-20
 Identities = 55/124 (44%), Positives = 79/124 (63%)

Query:    73 TLFLILMWYTFSTFLTLYNKTLLGDDMGKFPAPLLMNTVHFS---MQAILSKAIIWFWSH 129
             TL L+L++Y FS  +T YNK L       F  PL M  +H +   + + LS+A++   SH
Sbjct:    17 TLGLVLLYYCFSIGITFYNKWLTKS----FHFPLFMTMLHLAVIFLFSALSRALVQCSSH 72

Query:   130 RFQHTVSMSWRDYYVRVVPTGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFA 189
             R +  V +SW DY  RV PT LATALDV LSN S ++I+V+  TM KS++ +F+L+F+  
Sbjct:    73 RAR--VVLSWTDYLRRVAPTALATALDVGLSNWSFLYITVSLYTMTKSSAVLFILIFSLI 130

Query:   190 FRLE 193
             F+LE
Sbjct:   131 FKLE 134

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|E2RPV5 SLC35C2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 236 (88.1 bits), Expect = 1.0e-19, P = 1.0e-19
 Identities = 55/124 (44%), Positives = 79/124 (63%)

Query:    73 TLFLILMWYTFSTFLTLYNKTLLGDDMGKFPAPLLMNTVHFS---MQAILSKAIIWFWSH 129
             TL L+L++Y FS  +T YNK L       F  PL M  +H +   + + LS+A++   SH
Sbjct:    17 TLGLVLLYYCFSIGITFYNKWLTKS----FHFPLFMTMLHLAVIFLFSALSRALVQCSSH 72

Query:   130 RFQHTVSMSWRDYYVRVVPTGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFA 189
             R +  V +SW DY  RV PT LATALDV LSN S ++I+V+  TM KS++ +F+L+F+  
Sbjct:    73 RAR--VVLSWTDYLRRVAPTALATALDVGLSNWSFLYITVSLYTMTKSSAVLFILIFSLI 130

Query:   190 FRLE 193
             F+LE
Sbjct:   131 FKLE 134

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q9NQQ7 SLC35C2 "Solute carrier family 35 member C2" [Homo sapiens (taxid:9606)]

 Score = 235 (87.8 bits), Expect = 1.3e-19, P = 1.3e-19
 Identities = 54/124 (43%), Positives = 79/124 (63%)

Query:    73 TLFLILMWYTFSTFLTLYNKTLLGDDMGKFPAPLLMNTVHFS---MQAILSKAIIWFWSH 129
             TL L+L++Y FS  +T YNK L       F  PL M  +H +   + + LS+A++   SH
Sbjct:    17 TLGLVLLYYCFSIGITFYNKWLTKS----FHFPLFMTMLHLAVIFLFSALSRALVQCSSH 72

Query:   130 RFQHTVSMSWRDYYVRVVPTGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFA 189
             R +  V +SW DY  RV PT LATALDV LSN S ++++V+  TM KS++ +F+L+F+  
Sbjct:    73 RAR--VVLSWADYLRRVAPTALATALDVGLSNWSFLYVTVSLYTMTKSSAVLFILIFSLI 130

Query:   190 FRLE 193
             F+LE
Sbjct:   131 FKLE 134

GO:0006810 "transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005793 "endoplasmic reticulum-Golgi intermediate compartment" evidence=IDA

GO:0005801 "cis-Golgi network" evidence=IDA

UNIPROTKB|F5H4T9 SLC35C2 "Solute carrier family 35 member C2" [Homo sapiens (taxid:9606)]

 Score = 235 (87.8 bits), Expect = 2.1e-19, P = 2.1e-19
 Identities = 54/124 (43%), Positives = 79/124 (63%)

Query:    73 TLFLILMWYTFSTFLTLYNKTLLGDDMGKFPAPLLMNTVHFS---MQAILSKAIIWFWSH 129
             TL L+L++Y FS  +T YNK L       F  PL M  +H +   + + LS+A++   SH
Sbjct:    46 TLGLVLLYYCFSIGITFYNKWLTKS----FHFPLFMTMLHLAVIFLFSALSRALVQCSSH 101

Query:   130 RFQHTVSMSWRDYYVRVVPTGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFA 189
             R +  V +SW DY  RV PT LATALDV LSN S ++++V+  TM KS++ +F+L+F+  
Sbjct:   102 RAR--VVLSWADYLRRVAPTALATALDVGLSNWSFLYVTVSLYTMTKSSAVLFILIFSLI 159

Query:   190 FRLE 193
             F+LE
Sbjct:   160 FKLE 163

GO:0016021 "integral to membrane" evidence=IEA

MGI|MGI:2385166 Slc35c2 "solute carrier family 35, member C2" [Mus musculus (taxid:10090)]

 Score = 233 (87.1 bits), Expect = 2.2e-19, P = 2.2e-19
 Identities = 54/124 (43%), Positives = 79/124 (63%)

Query:    73 TLFLILMWYTFSTFLTLYNKTLLGDDMGKFPAPLLMNTVHFS---MQAILSKAIIWFWSH 129
             TL L+L++Y FS  +T YNK L       F  PL M  +H +   + + LS+A++   SH
Sbjct:    17 TLGLVLLYYCFSIGITFYNKWLTKS----FHFPLFMTMLHLAVIFLFSALSRALVQCSSH 72

Query:   130 RFQHTVSMSWRDYYVRVVPTGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFA 189
             + +  V +SW DY  RV PT LATALDV LSN S ++I+V+  TM KS++ +F+L+F+  
Sbjct:    73 KAR--VVLSWTDYLRRVAPTALATALDVGLSNWSFLYITVSLYTMTKSSAVLFILIFSLI 130

Query:   190 FRLE 193
             F+LE
Sbjct:   131 FKLE 134

GO:0003674 "molecular_function" evidence=ND

GO:0005793 "endoplasmic reticulum-Golgi intermediate compartment" evidence=ISO

GO:0005801 "cis-Golgi network" evidence=ISO

GO:0006810 "transport" evidence=IEA

GO:0010629 "negative regulation of gene expression" evidence=IDA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0036065 "fucosylation" evidence=IDA

GO:0036066 "protein O-linked fucosylation" evidence=IMP;IDA

GO:0045747 "positive regulation of Notch signaling pathway" evidence=IDA

UNIPROTKB|G4MY36 MGG_11246 "Nucleotide-sugar transporter" [Magnaporthe oryzae 70-15 (taxid:242507)]

 Score = 164 (62.8 bits), Expect = 6.9e-18, Sum P(2) = 6.9e-18
 Identities = 33/64 (51%), Positives = 43/64 (67%)

Query:   132 QHTVSMSWRDYYVRVVPTGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFR 191
             +  +   W  Y  R+ P G AT LD+ L N SL FI++TF TMCKS+S  F+L+FAF FR
Sbjct:   282 ERPIMTKWF-YLTRIGPCGAATGLDIGLGNTSLRFITLTFYTMCKSSSLAFVLMFAFLFR 340

Query:   192 LESP 195
             LE+P
Sbjct:   341 LEAP 344

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

ZFIN|ZDB-GENE-030131-2202 slc35c2 "solute carrier family 35, member C2" [Danio rerio (taxid:7955)]

 Score = 225 (84.3 bits), Expect = 5.1e-17, P = 5.1e-17
 Identities = 49/128 (38%), Positives = 80/128 (62%)

Query:    71 LKTLFLILMWYTFSTFLTLYNKTLLGDDMGKFPAPLLMNTVHFSM---QAILSKAIIWFW 127
             L+T+ L+L +Y FS  +T YNK L+ D    F  PL M  VH ++    + L+++ +  W
Sbjct:    12 LRTVGLVLFYYAFSIGITFYNKWLMKD----FHFPLFMTLVHLTIIFCLSTLTRSAMQCW 67

Query:   128 SHRFQHTVSMSWRDYYVRVVPTGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFA 187
             + + +  V++ W+ Y  +V PT LAT LD+ LSN S +FI+++  TM KS++ +F+L F+
Sbjct:    68 TGKPR--VTLPWKVYLSKVAPTALATTLDIGLSNWSFLFITISLYTMTKSSAVLFILFFS 125

Query:   188 FAFRLESP 195
               F+LE P
Sbjct:   126 LLFKLEEP 133

GO:0055085 "transmembrane transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

POMBASE|SPAC22E12.01 SPAC22E12.01 "triose phosphate transporter (predicted)" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 187 (70.9 bits), Expect = 4.1e-14, P = 4.1e-14
 Identities = 41/125 (32%), Positives = 69/125 (55%)

Query:    70 VLKTLFLILMWYTFSTFLTLYNKTLLGDDMGKFPAPLLMNTVHFSMQAILSK-AIIWFWS 128
             V+  + ++L WY FS  L++ NK +  +    F  PL +++    +Q   +K  I+ F  
Sbjct:    50 VVIIVLIVLAWYFFSLLLSMMNKWIFSESKMDFQFPLFLSSCQMLVQMGFAKLTILAFPR 109

Query:   129 HRFQHTVSMSWRDYYVRVVPTGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAF 188
             ++     + SW +Y+ R     L T LD+ LSN SL  I+++F TMC+S+  IF+  F+ 
Sbjct:   110 YQPNKKDNFSWLEYFYRAGICALVTGLDIGLSNASLETITLSFYTMCRSSILIFVFFFSV 169

Query:   189 AFRLE 193
              FR+E
Sbjct:   170 IFRIE 174

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0008643 "carbohydrate transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0035436 "triose phosphate transmembrane transport" evidence=ISM

GO:0071917 "triose-phosphate transmembrane transporter activity" evidence=ISM

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00018810001 SubName- Full=Chromosome chr12 scaffold_18, whole genome shotgun sequence; (462 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	213
pfam00892	126	pfam00892, EamA, EamA-like transporter family	0.001

>gnl|CDD|216178 pfam00892, EamA, EamA-like transporter family

 Score = 37.2 bits (87), Expect = 0.001
 Identities = 25/109 (22%), Positives = 45/109 (41%), Gaps = 5/109 (4%)

Query: 105 PLLMNTVHFSMQAILSK-AIIWFWSHRFQHTVSMSWRDYYVRVVPTGLATALDVNLSNES 163
           PL      F +  IL    +          ++       Y+ +  T L       L   +
Sbjct: 19  PLTFTAYRFLIAGILLILLLFLLRKPFALLSLKAILALLYLGLFGTALG----YLLYFYA 74

Query: 164 LVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF 212
           L ++S + A++  S SP+F L+ +     E  ++K L  I++I +GVL 
Sbjct: 75  LKYVSASNASVITSLSPVFTLILSVLLLGEKLTLKQLLGIVLILLGVLL 123

This family includes many hypothetical membrane proteins of unknown function. Many of the proteins contain two copies of the aligned region. The family used to be known as DUF6. Length = 126

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	213
KOG1443	349	consensus Predicted integral membrane protein [Fun	99.92
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	99.92
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	99.91
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	99.86
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	99.79
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	99.66
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	99.57
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	99.37
KOG1580	337	consensus UDP-galactose transporter related protei	98.97
KOG1581	327	consensus UDP-galactose transporter related protei	98.96
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	98.95
KOG1582	367	consensus UDP-galactose transporter related protei	98.76
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	98.69
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	98.6
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	98.54
PLN00411	358	nodulin MtN21 family protein; Provisional	98.52
PRK15430	296	putative chloramphenical resistance permease RarD;	98.48
PRK11272	292	putative DMT superfamily transporter inner membran	98.47
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.41
PRK11689	295	aromatic amino acid exporter; Provisional	98.18
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	98.17
PLN00411	358	nodulin MtN21 family protein; Provisional	98.08
COG2510	140	Predicted membrane protein [Function unknown]	98.02
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	97.98
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	97.94
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.85
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	97.82
PRK11272	292	putative DMT superfamily transporter inner membran	97.78
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	97.77
KOG2765	416	consensus Predicted membrane protein [Function unk	97.71
COG0697	292	RhaT Permeases of the drug/metabolite transporter	97.69
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	97.6
PRK10532	293	threonine and homoserine efflux system; Provisiona	97.48
PRK10532	293	threonine and homoserine efflux system; Provisiona	97.34
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	97.33
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	97.24
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	97.21
PRK11689	295	aromatic amino acid exporter; Provisional	97.18
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	96.96
KOG3912	372	consensus Predicted integral membrane protein [Gen	96.93
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	96.89
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	96.69
PRK15430	296	putative chloramphenical resistance permease RarD;	96.63
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	96.48
PRK09541	110	emrE multidrug efflux protein; Reviewed	96.42
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	96.25
COG0697	292	RhaT Permeases of the drug/metabolite transporter	96.23
PRK11431	105	multidrug efflux system protein; Provisional	96.22
PRK10650	109	multidrug efflux system protein MdtI; Provisional	96.2
KOG2766	336	consensus Predicted membrane protein [Function unk	96.19
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	96.13
KOG4510	346	consensus Permease of the drug/metabolite transpor	96.02
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	95.95
COG2076	106	EmrE Membrane transporters of cations and cationic	95.75
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	95.4
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	95.26
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	94.53
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	93.9
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	93.55
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	92.58
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	92.41
COG2962	293	RarD Predicted permeases [General function predict	92.08
COG2962	293	RarD Predicted permeases [General function predict	90.52
PF09930	224	DUF2162: Predicted transporter (DUF2162); InterPro	88.46
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	87.59
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	87.02
KOG2765	416	consensus Predicted membrane protein [Function unk	86.78

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=99.92  E-value=2.7e-25  Score=193.28  Aligned_cols=146  Identities=34%  Similarity=0.582  Sum_probs=132.8

Q ss_pred             ccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCccchHHHHHHHHHHHHHHHHHHHHHHhcCcc-cccccchHH
Q 041251           63 SVVSAADVLKTLFLILMWYTFSTFLTLYNKTLLGDDMGKFPAPLLMNTVHFSMQAILSKAIIWFWSHRFQ-HTVSMSWRD  141 (213)
Q Consensus        63 ~~~~~~~~l~~~~~i~~w~~~Si~~~~~NK~ll~~~~~~Fp~P~~Lt~~q~~~~~~l~~~l~~~~~~~~~-~~~~~~~~~  141 (213)
                      .+-.+.+...+++.++.||++|+++.++|||.-.    .|+||++++.+|+++.++++.+.++...++.. .+.+.+|++
T Consensus         7 ~~~~~~~rV~~L~lVl~yY~~Si~Ltf~~~~~~~----~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~   82 (349)
T KOG1443|consen    7 DNQFLMNRVLTLALVLLYYFLSIGLTFYFKWLTK----NFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRD   82 (349)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc----CcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHH
Confidence            4456777888888999999999999999999865    79999999999999999999988777643322 356889999


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhcccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251          142 YYVRVVPTGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF  212 (213)
Q Consensus       142 ~~~~vlP~sl~~~~~i~~~n~sL~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l  212 (213)
                      |+|+++|++++.+.+++++|||++|+++|+|+|+||.+++|+++++.+|+.|++++...+.+++|.+|+++
T Consensus        83 ~Lr~~aPtalata~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glfl  153 (349)
T KOG1443|consen   83 YLRRLAPTALATALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFL  153 (349)
T ss_pred             HHHHhhhhhhhhhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999986

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=99.92  E-value=3.6e-25  Score=195.96  Aligned_cols=143  Identities=21%  Similarity=0.304  Sum_probs=128.6

Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCccchHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHH
Q 041251           66 SAADVLKTLFLILMWYTFSTFLTLYNKTLLGDDMGKFPAPLLMNTVHFSMQAILSKAIIWFWSHRFQHTVSMSWRDYYVR  145 (213)
Q Consensus        66 ~~~~~l~~~~~i~~w~~~Si~~~~~NK~ll~~~~~~Fp~P~~Lt~~q~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~  145 (213)
                      ..++.+....++..|+++|++.+++||++++.  ++||||++++++|+.++++...++..   .+..+..+++.+.+++.
T Consensus        11 ~~~~~~~~~~~~~~w~~~~v~~~~~nK~il~~--~~f~~p~~lt~~~~~~~~l~~~v~~~---l~~~~~~~~~~~~~~~~   85 (316)
T KOG1441|consen   11 QLKKILRIGIAFAIWYVLSVGVIILNKYILSK--YGFPFPITLTMLHLFCGALALLVIKV---LKLVPPSKISSKLPLRT   85 (316)
T ss_pred             ccchhHHHHHHHHHHhhhheeeEEeeHhhhcc--CCCCCccHHHHHHHHHHHHHHHHHHH---hcCCCCCccccccchHH
Confidence            34478899999999999999999999999996  79999999999988887765544433   35666666666788999


Q ss_pred             HHHHHHHHHHHHHHhhhhcccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEeC
Q 041251          146 VVPTGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLFS  213 (213)
Q Consensus       146 vlP~sl~~~~~i~~~n~sL~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~lA  213 (213)
                      ++|+|++++++++++|.|+.++||||+|++|+++|++++++++++.+|+++..+++++++|+.||++|
T Consensus        86 llpl~~~~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ia  153 (316)
T KOG1441|consen   86 LLPLGLVFCISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIA  153 (316)
T ss_pred             HHHHHHHHHHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEe
Confidence            99999999999999999999999999999999999999999999999999999999999999999986

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=99.91  E-value=2.9e-23  Score=186.53  Aligned_cols=138  Identities=19%  Similarity=0.282  Sum_probs=122.3

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCccchHHHHHHHHHHHHHHHHHHHHHHhcCcccccccc-hHHHHHHHH
Q 041251           69 DVLKTLFLILMWYTFSTFLTLYNKTLLGDDMGKFPAPLLMNTVHFSMQAILSKAIIWFWSHRFQHTVSMS-WRDYYVRVV  147 (213)
Q Consensus        69 ~~l~~~~~i~~w~~~Si~~~~~NK~ll~~~~~~Fp~P~~Lt~~q~~~~~~l~~~l~~~~~~~~~~~~~~~-~~~~~~~vl  147 (213)
                      ..+++.+++++||++|+..+++||++++    .||||++++++|++++++++.++..   .+.++.++++ ++.+++.++
T Consensus        46 ~~~~~~~~~~~wy~~s~~~~~~nK~vl~----~~~~P~~l~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~ll  118 (350)
T PTZ00343         46 FKWKLALLFLTWYALNVLYVVDNKLALN----MLPLPWTISSLQLFVGWLFALLYWA---TGFRKIPRIKSLKLFLKNFL  118 (350)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHHH----hCChhHHHHHHHHHHHHHHHHHHHH---hCCCCCCCCCCHHHHHHHHH
Confidence            4789999999999999999999999998    6899999999999999887655432   2333434443 566789999


Q ss_pred             HHHHHHHHHHHHhhhhcccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEeC
Q 041251          148 PTGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLFS  213 (213)
Q Consensus       148 P~sl~~~~~i~~~n~sL~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~lA  213 (213)
                      |+|+++...+...|.|+++++++++|++|+++|++++++++++++||++++++++++++++|++++
T Consensus       119 p~gl~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~  184 (350)
T PTZ00343        119 PQGLCHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALA  184 (350)
T ss_pred             HHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHhe
Confidence            999999999999999999999999999999999999999999999999999999999999999874

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=99.86  E-value=3.8e-21  Score=168.52  Aligned_cols=134  Identities=22%  Similarity=0.360  Sum_probs=118.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCccchHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHH
Q 041251           71 LKTLFLILMWYTFSTFLTLYNKTLLGDDMGKFPAPLLMNTVHFSMQAILSKAIIWFWSHRFQHTVSMSWRDYYVRVVPTG  150 (213)
Q Consensus        71 l~~~~~i~~w~~~Si~~~~~NK~ll~~~~~~Fp~P~~Lt~~q~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vlP~s  150 (213)
                      +++.+++++||+.|++++++||++++    .|++|+++++.|++++++++.+...   .+.++.++++++ .++.++|++
T Consensus         1 ~~~~~~~~~w~~~~~~~~~~NK~~l~----~~~~P~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~-~~~~~~~~g   72 (302)
T TIGR00817         1 LQTGLLFGLWYFLNVYFNIYNKKLLN----VFPYPYFKTLISLAVGSLYCLLSWS---SGLPKRLKISSA-LLKLLLPVA   72 (302)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHh----hCChhHHHHHHHHHHHHHHHHHHHH---hCCCCCCCCCHH-HHHHHHHHH
Confidence            46788999999999999999999998    5899999999999998877665522   123344456665 578899999


Q ss_pred             HHHHHHHHHhhhhcccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251          151 LATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF  212 (213)
Q Consensus       151 l~~~~~i~~~n~sL~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l  212 (213)
                      +++++++.+.|.|++|++++++|++|+++|++++++++++++||++.+.+++++++++|+++
T Consensus        73 ~~~~~~~~~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l  134 (302)
T TIGR00817        73 IVHTIGHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVAL  134 (302)
T ss_pred             HHHHHHHHHHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhh
Confidence            99999999999999999999999999999999999999999999999999999999999875

specificities overlap.

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.79  E-value=6.2e-19  Score=154.61  Aligned_cols=137  Identities=17%  Similarity=0.185  Sum_probs=118.9

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCccchHHHHH--HHHHHHHHHHHHHHHHHhcCcccccccchHHHHHH
Q 041251           68 ADVLKTLFLILMWYTFSTFLTLYNKTLLGDDMGKFPAPLLMNT--VHFSMQAILSKAIIWFWSHRFQHTVSMSWRDYYVR  145 (213)
Q Consensus        68 ~~~l~~~~~i~~w~~~Si~~~~~NK~ll~~~~~~Fp~P~~Lt~--~q~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~  145 (213)
                      ++..+.+...+.|+.+|+.+++.||++++.    ++||..++.  .|++++.+...++.+   .|..+.++++|+ ..|+
T Consensus         8 ~~~~~~l~sa~~Y~~sS~lm~vvNK~vls~----y~f~~~l~l~~~Q~l~s~~~v~~lk~---~~lv~~~~l~~~-~~kk   79 (314)
T KOG1444|consen    8 KKQSSPLLSALFYCLSSILMTVVNKIVLSS----YNFPMGLLLMLLQSLASVLVVLVLKR---LGLVNFRPLDLR-TAKK   79 (314)
T ss_pred             hhhhhhhHHHHHHHHHHHHHHHHHHHHHhc----CCCcHHHHHHHHHHHHHHHHHHHHHH---hceeecCCcChH-HHHH
Confidence            334555667889999999999999999994    555555555  999998887776654   467788889996 5899


Q ss_pred             HHHHHHHHHHHHHHhhhhcccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251          146 VVPTGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF  212 (213)
Q Consensus       146 vlP~sl~~~~~i~~~n~sL~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l  212 (213)
                      ++|++++|.+++.++..+++|++|++++++|..+|+++++.|.++++++++.++++++..+.+|...
T Consensus        80 ~~P~~~lf~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~  146 (314)
T KOG1444|consen   80 WFPVSLLFVGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVA  146 (314)
T ss_pred             HccHHHHHHHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHh
Confidence            9999999999999999999999999999999999999999999999999999999999999988654

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.66  E-value=1.7e-17  Score=143.12  Aligned_cols=151  Identities=17%  Similarity=0.237  Sum_probs=130.9

Q ss_pred             CcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCccchHHHHHHHHHHHHHHHHHHHHHHh-c-Cc--ccccc
Q 041251           61 TKSVVSAADVLKTLFLILMWYTFSTFLTLYNKTLLGDDMGKFPAPLLMNTVHFSMQAILSKAIIWFWS-H-RF--QHTVS  136 (213)
Q Consensus        61 ~~~~~~~~~~l~~~~~i~~w~~~Si~~~~~NK~ll~~~~~~Fp~P~~Lt~~q~~~~~~l~~~l~~~~~-~-~~--~~~~~  136 (213)
                      ++.++-.++..+.......|..+|+++++.||++++.......-|+|+++.|++++..+|..+.+... . ..  .+.-+
T Consensus        17 ~e~~~l~~n~~~v~~~vs~ywv~SI~~vf~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~   96 (347)
T KOG1442|consen   17 EEMPVLEANAKQVDSAVSLYWVTSIGLVFLNKHLLSSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQ   96 (347)
T ss_pred             hhhHHHHHhhhchhhhccceeeeeehhhhhHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCccc
Confidence            35667788888888889999999999999999999976667888999999999999998887765421 1 11  13334


Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHhhhhcccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251          137 MSWRDYYVRVVPTGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF  212 (213)
Q Consensus       137 ~~~~~~~~~vlP~sl~~~~~i~~~n~sL~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l  212 (213)
                      ++. +..+.++|+++.+.++|.+.|.+|+|++|+||++-|+++.+|+++++|++.+++.+.....++++|++|..+
T Consensus        97 ldl-~t~r~vlplsvVfi~mI~fnnlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~l  171 (347)
T KOG1442|consen   97 LDL-ATARQVLPLSVVFILMISFNNLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGL  171 (347)
T ss_pred             ccH-HHHHhhcchhheeeeehhccceehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehhee
Confidence            666 468899999999999999999999999999999999999999999999999999999999999999999765

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=99.57  E-value=2e-14  Score=126.56  Aligned_cols=126  Identities=19%  Similarity=0.257  Sum_probs=102.4

Q ss_pred             HHHHHHHHHHHHHhhcCCCCCccchHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHHHHHHHh
Q 041251           81 YTFSTFLTLYNKTLLGDDMGKFPAPLLMNTVHFSMQAILSKAIIWFWSHRFQHTVSMSWRDYYVRVVPTGLATALDVNLS  160 (213)
Q Consensus        81 ~~~Si~~~~~NK~ll~~~~~~Fp~P~~Lt~~q~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vlP~sl~~~~~i~~~  160 (213)
                      +.+-.+..++++++.... +..+||++++++|++++++.+.+....+  +.++.++    ..++..++.++++.++..++
T Consensus         9 ~~~~~~~g~~qE~i~~~~-~~~~~~~~lt~~q~~~~~~~~~~~~~~~--~~~~~~~----~~~~~~~~~~~~~~~~~~~~   81 (303)
T PF08449_consen    9 FGGCCSYGILQEKIMTTP-YGSPFPLFLTFVQFAFNALFSFILLSLF--KFPKSRK----IPLKKYAILSFLFFLASVLS   81 (303)
T ss_pred             HHHHHHHHHHHHHHHcCC-CCCcccHHHHHHHHHHHHHHHHHHHHhc--cccCCCc----ChHHHHHHHHHHHHHHHHHH
Confidence            333346667788887754 2336899999999999888877765433  2112222    23566788999999999999


Q ss_pred             hhhcccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEeC
Q 041251          161 NESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLFS  213 (213)
Q Consensus       161 n~sL~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~lA  213 (213)
                      |.|++|+|+|++++.|++.|++++++++++.+||++.+.+++++++++|++++
T Consensus        82 ~~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~  134 (303)
T PF08449_consen   82 NAALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIF  134 (303)
T ss_pred             HHHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHhee
Confidence            99999999999999999999999999999999999999999999999999763

; GO: 0055085 transmembrane transport

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=99.37  E-value=1.3e-12  Score=110.32  Aligned_cols=124  Identities=18%  Similarity=0.183  Sum_probs=105.0

Q ss_pred             HHHHHHHHHHHHHHHHHhhcCCCCCccchHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHHHH
Q 041251           77 ILMWYTFSTFLTLYNKTLLGDDMGKFPAPLLMNTVHFSMQAILSKAIIWFWSHRFQHTVSMSWRDYYVRVVPTGLATALD  156 (213)
Q Consensus        77 i~~w~~~Si~~~~~NK~ll~~~~~~Fp~P~~Lt~~q~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vlP~sl~~~~~  156 (213)
                      ++.|+.+|+.+++.||++++..  +|+..+.+.++|-++|.+...++.......+|    .+  + .+.|+|++++...+
T Consensus        11 ~lsYc~sSIlmTltNKyVls~~--gfnMnflll~vQSlvcvv~l~iLk~l~~~~fR----~t--~-aK~WfpiSfLLv~M   81 (309)
T COG5070          11 SLSYCFSSILMTLTNKYVLSNL--GFNMNFLLLAVQSLVCVVGLLILKFLRLVEFR----LT--K-AKKWFPISFLLVVM   81 (309)
T ss_pred             HHHHHHHHHHHHHhhHheecCC--CCchhhHHHHHHHHHHHHHHHHHHHHhHhhee----hh--h-hhhhcCHHHHHHHH
Confidence            6789999999999999999975  66667888899999988877776544222222    22  2 77889999999999


Q ss_pred             HHHhhhhcccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeee
Q 041251          157 VNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIG  209 (213)
Q Consensus       157 i~~~n~sL~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~G  209 (213)
                      +..+..||+|++||.|++.|.++.+.++..+.++++.+.+-..+.+.++++..
T Consensus        82 Iyt~SKsLqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlS  134 (309)
T COG5070          82 IYTSSKSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLS  134 (309)
T ss_pred             HHhcccceeeeeeeHHHHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHH
Confidence            99999999999999999999999999999999999999988888888777643

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=98.97  E-value=2.7e-10  Score=97.12  Aligned_cols=108  Identities=16%  Similarity=0.250  Sum_probs=90.7

Q ss_pred             CCCccchHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHHHHHHHhhhhcccchHhHHHHHhhh
Q 041251           99 MGKFPAPLLMNTVHFSMQAILSKAIIWFWSHRFQHTVSMSWRDYYVRVVPTGLATALDVNLSNESLVFISVTFATMCKSA  178 (213)
Q Consensus        99 ~~~Fp~P~~Lt~~q~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vlP~sl~~~~~i~~~n~sL~~vsVsf~q~iKs~  178 (213)
                      ..+|.|.+.|.++|+.+..+.+.++....     +..+++. .-.+.-+.+++.|.+.++.+|.|++|+|.|...+-||.
T Consensus        47 ~E~FTfalaLVf~qC~~N~vfAkvl~~ir-----~~~~~D~-t~~~~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKSc  120 (337)
T KOG1580|consen   47 IEKFTFALALVFFQCTANTVFAKVLFLIR-----KKTEIDN-TPTKMYAACSASYLLAMVSSNQALQYVPYPTQVLGKSC  120 (337)
T ss_pred             hheehHHHHHHHHHHHHHHHHHHhheeec-----ccccccC-CcchHHHHHHHHHHHHHHhccchhcccCCcHHHhcccC
Confidence            45899999999999999999998765432     2222221 01223356899999999999999999999999999999


Q ss_pred             hhHHHHHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251          179 SPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF  212 (213)
Q Consensus       179 tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l  212 (213)
                      .|+-++++++++.++.++|+.+++++.|+.||++
T Consensus       121 KPIPVMilGVl~~~KsY~w~kY~cVL~IV~GVal  154 (337)
T KOG1580|consen  121 KPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVAL  154 (337)
T ss_pred             CCcceeeeehhhhcccccHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999975

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=98.96  E-value=1.1e-08  Score=89.84  Aligned_cols=141  Identities=16%  Similarity=0.185  Sum_probs=111.1

Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHHHhhc----CCCCCccchHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHH
Q 041251           66 SAADVLKTLFLILMWYTFSTFLTLYNKTLLG----DDMGKFPAPLLMNTVHFSMQAILSKAIIWFWSHRFQHTVSMSWRD  141 (213)
Q Consensus        66 ~~~~~l~~~~~i~~w~~~Si~~~~~NK~ll~----~~~~~Fp~P~~Lt~~q~~~~~~l~~~l~~~~~~~~~~~~~~~~~~  141 (213)
                      ..++....++++.--+.+=+...++...+.+    .++.+|..|.|+..+|-+++.+++.+....|...  ...+-+|  
T Consensus         8 ~~~~~~~L~~c~~GI~~t~l~~gVlQEki~T~~y~~~~~rF~~~~fL~~~q~l~~~~~s~~~l~~~k~~--~~~~apl--   83 (327)
T KOG1581|consen    8 MANKIILLVFCFSGIYATFLTWGVLQEKIMTRPYGEDGERFEHSLFLVFCQRLVALLVSYAMLKWWKKE--LSGVAPL--   83 (327)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhcceeecccCcccccccccHHHHHHHHHHHHHHHHHHHhccccc--CCCCCch--
Confidence            3556666666655555555566677766643    2456899999999999999988887766655322  2222233  


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhcccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251          142 YYVRVVPTGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF  212 (213)
Q Consensus       142 ~~~~vlP~sl~~~~~i~~~n~sL~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l  212 (213)
                        ....-+++....+-.++-.||+|+|.|.+.++|++..+.++++..+++++|++...+++..+|..||.+
T Consensus        84 --~~y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~Gvsi  152 (327)
T KOG1581|consen   84 --YKYSLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSI  152 (327)
T ss_pred             --hHHhHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheee
Confidence              334558899999999999999999999999999999999999999999999999999999999999975

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=98.95  E-value=3.4e-09  Score=79.45  Aligned_cols=118  Identities=27%  Similarity=0.387  Sum_probs=92.2

Q ss_pred             HHHHHHHHhhcCCCCCccchHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHH-HHHHHHHhhhhc
Q 041251           86 FLTLYNKTLLGDDMGKFPAPLLMNTVHFSMQAILSKAIIWFWSHRFQHTVSMSWRDYYVRVVPTGLA-TALDVNLSNESL  164 (213)
Q Consensus        86 ~~~~~NK~ll~~~~~~Fp~P~~Lt~~q~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vlP~sl~-~~~~i~~~n~sL  164 (213)
                      ....++|...+    +++ |...+.++++++.+ ..++....  +..+....+++++. ..+..+++ ..++..+.+.++
T Consensus         5 ~~~~~~k~~~~----~~~-~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~a~   75 (126)
T PF00892_consen    5 IYSVFSKKLLK----KIS-PLSITFWRFLIAGI-LLILLLIL--GRKPFKNLSPRQWL-WLLFLGLLGTALAYLLYFYAL   75 (126)
T ss_pred             eHHHHHHHHhc----cCC-HHHHHHHHHHHHHH-HHHHHHhh--ccccccCCChhhhh-hhhHhhccceehHHHHHHHHH
Confidence            45678888887    467 88888999998776 43333322  11122345555544 44555555 799999999999


Q ss_pred             ccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251          165 VFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF  212 (213)
Q Consensus       165 ~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l  212 (213)
                      ++.+++..+++..+.|++++++++++.+|+++++.+++++++++|+.+
T Consensus        76 ~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l  123 (126)
T PF00892_consen   76 KYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVL  123 (126)
T ss_pred             HhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999864

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=98.76  E-value=1.3e-08  Score=88.36  Aligned_cols=134  Identities=13%  Similarity=0.176  Sum_probs=105.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcc-chHHHHHHHHHHHHHHHHHHHHHHhcCcc-cccccchHHHHHH
Q 041251           68 ADVLKTLFLILMWYTFSTFLTLYNKTLLGDDMGKFP-APLLMNTVHFSMQAILSKAIIWFWSHRFQ-HTVSMSWRDYYVR  145 (213)
Q Consensus        68 ~~~l~~~~~i~~w~~~Si~~~~~NK~ll~~~~~~Fp-~P~~Lt~~q~~~~~~l~~~l~~~~~~~~~-~~~~~~~~~~~~~  145 (213)
                      .|..+.+.+++..++.-+..-....++++.+  +|+ |-+.+|.+|+++=.....+-++    .++ ++..++||.|.+ 
T Consensus        39 pkw~QFlic~~g~Ff~Yl~yGy~qElif~~~--gfkp~GWylTlvQf~~Ysg~glie~~----~~~~k~r~iP~rtY~~-  111 (367)
T KOG1582|consen   39 PKWTQFLICSAGVFFLYLVYGYLQELIFNVE--GFKPFGWYLTLVQFLVYSGFGLIELQ----LIQTKRRVIPWRTYVI-  111 (367)
T ss_pred             chhhhHHHHHhHHHHHHHHHHHHHHHHhccc--cCcccchHHHHHHHHHHHhhhheEEE----eecccceecchhHhhh-
Confidence            3456666666666677777778889999875  554 8999999999974333222111    122 234567877654 


Q ss_pred             HHHHHHHHHHHHHHhhhhcccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeE
Q 041251          146 VVPTGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVL  211 (213)
Q Consensus       146 vlP~sl~~~~~i~~~n~sL~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~  211 (213)
                         ++++..++++++|-|+.|++.|...+.|++.-+-+++.+.++.++|+.+..+.+..+++.|.+
T Consensus       112 ---la~~t~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli  174 (367)
T KOG1582|consen  112 ---LAFLTVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLI  174 (367)
T ss_pred             ---hHhhhhhccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHH
Confidence               889999999999999999999999999999999999999999999999999999999888864

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=98.69  E-value=2.9e-07  Score=82.79  Aligned_cols=141  Identities=16%  Similarity=0.162  Sum_probs=95.9

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCccchHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHH
Q 041251           67 AADVLKTLFLILMWYTFSTFLTLYNKTLLGDDMGKFPAPLLMNTVHFSMQAILSKAIIWFWSHRFQHTVSMSWRDYYVRV  146 (213)
Q Consensus        67 ~~~~l~~~~~i~~w~~~Si~~~~~NK~ll~~~~~~Fp~P~~Lt~~q~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~v  146 (213)
                      .++.++.++..=+--++..++...+..+-+.   ++..|.+-+.+.++..+++-... ..++.+.++..+.-++++++. 
T Consensus         8 ~~~~~~~~~lgQ~lsl~~~~t~~~s~~l~~~---~~~~P~~Qs~~~Y~~l~~vy~~~-~~~r~~~~~~~~~~~~~~w~y-   82 (334)
T PF06027_consen    8 TRRFWIVLLLGQVLSLCITGTGTFSSLLANK---GVNIPTFQSFFNYVLLALVYTPI-LLYRRGFKKWLKVLKRPWWKY-   82 (334)
T ss_pred             HHHHHHHHHHHHHHHHHHHhHHHHHHHHHhc---CccCcHHHHHHHHHHHHHHHhhh-hhhccccccchhhcchhHHHH-
Confidence            3444444443322233344555556665542   57778888877776533322211 122112112112223344444 


Q ss_pred             HHHHHHHHHHHHHhhhhcccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251          147 VPTGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF  212 (213)
Q Consensus       147 lP~sl~~~~~i~~~n~sL~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l  212 (213)
                      +.++++-..++.+.+.|++|.+++-.|++..++.+|+++++++++++|+++..++++++.++|+++
T Consensus        83 ~lla~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~l  148 (334)
T PF06027_consen   83 FLLALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVL  148 (334)
T ss_pred             HHHHHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhh
Confidence            446899999999999999999999999999999999999999999999999999999999999764

Some of the sequences in this family are annotated as putative membrane proteins.

>TIGR00688 rarD rarD protein

Probab=98.60  E-value=6.9e-07  Score=76.39  Aligned_cols=121  Identities=14%  Similarity=0.108  Sum_probs=88.0

Q ss_pred             HHHHHHHHhhcCCCCCccchHHHHHHHHHHHHHHHHHHHHHHhcCcc--cc-cccchHHHHHHHHHHHHHHHHHHHHhhh
Q 041251           86 FLTLYNKTLLGDDMGKFPAPLLMNTVHFSMQAILSKAIIWFWSHRFQ--HT-VSMSWRDYYVRVVPTGLATALDVNLSNE  162 (213)
Q Consensus        86 ~~~~~NK~ll~~~~~~Fp~P~~Lt~~q~~~~~~l~~~l~~~~~~~~~--~~-~~~~~~~~~~~vlP~sl~~~~~i~~~n~  162 (213)
                      ....+-|. +.    +.+ |..+...++++++++..+.......+..  +. ++.++++......-.+++.++...+-..
T Consensus        16 ~~~~~~k~-~~----~~~-~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~   89 (256)
T TIGR00688        16 YMYYYSKL-LK----PLP-ATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLLIGFNWWLFIW   89 (256)
T ss_pred             HHHHHHHH-hc----cCC-HHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHH
Confidence            44456777 33    356 8999999999877654443322211110  11 1112222233355567778888899999


Q ss_pred             hcccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251          163 SLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF  212 (213)
Q Consensus       163 sL~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l  212 (213)
                      |+++.+++-.+++-.++|++++++++++++||++.+.++++++...|+++
T Consensus        90 a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~l  139 (256)
T TIGR00688        90 AVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVIS  139 (256)
T ss_pred             HHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999753

This uncharacterized protein is predicted to have many membrane-spanning domains.

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=98.54  E-value=6.4e-07  Score=76.09  Aligned_cols=113  Identities=12%  Similarity=0.092  Sum_probs=88.3

Q ss_pred             HHHHHHHhhcCCCCCccchHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHHHHHHHhhhhccc
Q 041251           87 LTLYNKTLLGDDMGKFPAPLLMNTVHFSMQAILSKAIIWFWSHRFQHTVSMSWRDYYVRVVPTGLATALDVNLSNESLVF  166 (213)
Q Consensus        87 ~~~~NK~ll~~~~~~Fp~P~~Lt~~q~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vlP~sl~~~~~i~~~n~sL~~  166 (213)
                      .....|+.++.   ..| |..+...+++++.++.....+ .  +      .+.+++.+..+..++++.+...+...|++|
T Consensus         4 ~~~~~k~~~~~---~~~-~~~~~~~r~~~~~l~l~~~~~-~--~------~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~   70 (260)
T TIGR00950         4 TGVVIGQYLEG---QVP-LYFAVFRRLIFALLLLLPLLR-R--R------PPLKRLLRLLLLGALQIGVFYVLYFVAVKR   70 (260)
T ss_pred             hHHHHHHHHhc---CCC-HHHHHHHHHHHHHHHHHHHHH-h--c------cCHhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            44668888873   344 788888888876665544322 1  2      123344555566667788899999999999


Q ss_pred             chHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251          167 ISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF  212 (213)
Q Consensus       167 vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l  212 (213)
                      ++.+..+++.++.|+++++++.++.+||++++.+.++++.+.|+.+
T Consensus        71 ~~~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~l  116 (260)
T TIGR00950        71 LPVGEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVL  116 (260)
T ss_pred             cChhhhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHh
Confidence            9999999999999999999999999999999999999999999754

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=98.52  E-value=1.6e-06  Score=78.64  Aligned_cols=125  Identities=15%  Similarity=0.144  Sum_probs=93.5

Q ss_pred             HHHHHHHHHHHHhhcCCCCCccchHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHHHHHHHhh
Q 041251           82 TFSTFLTLYNKTLLGDDMGKFPAPLLMNTVHFSMQAILSKAIIWFWSHRFQHTVSMSWRDYYVRVVPTGLATALDVNLSN  161 (213)
Q Consensus        82 ~~Si~~~~~NK~ll~~~~~~Fp~P~~Lt~~q~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vlP~sl~~~~~i~~~n  161 (213)
                      +...++..+-|..++.   +.+ |..+.++++.+++++...+.... .+.++.++.+|++ +..+..++++......+.+
T Consensus        23 ~~~~~~~~~~k~a~~~---G~~-~~~~~~~R~~iA~l~Ll~~~~~~-~~~~~~~~~~~~~-~~~l~l~g~~g~~~~~~~~   96 (358)
T PLN00411         23 TSVVGISTLFKVATSK---GLN-IYPFLGYSYLLASLLLLPSLFFT-NRSRSLPPLSVSI-LSKIGLLGFLGSMYVITGY   96 (358)
T ss_pred             HHHHHHHHHHHHHHHC---CCC-ccHHHHHHHHHHHHHHHHHHHHH-HHhcccCcchHHH-HHHHHHHHHHHHHHHHHHH
Confidence            4445778888999874   566 77788999998776665543322 1112223345655 4445556666555666889


Q ss_pred             hhcccchHhHHHHHhhhhhHHHHHHHHHh------hccCCChhHHHhhhheeeeeEe
Q 041251          162 ESLVFISVTFATMCKSASPIFLLVFAFAF------RLESPSIKLLGIIIIISIGVLF  212 (213)
Q Consensus       162 ~sL~~vsVsf~q~iKs~tPifv~ll~~l~------~~e~~s~~~~lsl~lIv~Gv~l  212 (213)
                      ++++|.|.+...++-++.|++++++++++      ++||.+.+.++++++.+.|+.+
T Consensus        97 ~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~l  153 (358)
T PLN00411         97 IGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALV  153 (358)
T ss_pred             HHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999      5999999999999998888753

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=98.48  E-value=2.8e-06  Score=74.51  Aligned_cols=126  Identities=10%  Similarity=0.034  Sum_probs=89.0

Q ss_pred             HHHHHHHHHHHHHHHHhhcCCCCCccchHHHHHHHHHHHHHHHHHHHHHHhcCccc-ccc-cchHHHHHHHHHHHHHHHH
Q 041251           78 LMWYTFSTFLTLYNKTLLGDDMGKFPAPLLMNTVHFSMQAILSKAIIWFWSHRFQH-TVS-MSWRDYYVRVVPTGLATAL  155 (213)
Q Consensus        78 ~~w~~~Si~~~~~NK~ll~~~~~~Fp~P~~Lt~~q~~~~~~l~~~l~~~~~~~~~~-~~~-~~~~~~~~~vlP~sl~~~~  155 (213)
                      +....++..-.+. |.+ .    .++ |..+.+.|++++.+....+.... .+.+. ... -++++. ...+-.+++.++
T Consensus        15 ~a~~~wg~~~~~~-k~~-~----~~~-~~~~~~~R~~~a~~~l~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~   85 (296)
T PRK15430         15 AAYFIWGIAPAYF-KLI-Y----YVP-ADEILTHRVIWSFFFMVVLMSIC-RQWSYLKTLIQTPQKI-FMLAVSAVLIGG   85 (296)
T ss_pred             HHHHHHHHHHHHH-HHh-c----CCC-HHHHHHHHHHHHHHHHHHHHHHH-ccHHHHHHHHcCHHHH-HHHHHHHHHHHH
Confidence            3334555343444 875 3    466 89999999998766443332221 11111 000 123332 223345667778


Q ss_pred             HHHHhhhhcccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251          156 DVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF  212 (213)
Q Consensus       156 ~i~~~n~sL~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l  212 (213)
                      ...+-.+++++.|++...++-.+.|++++++++++.+||++.+.++++++...|+.+
T Consensus        86 ~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~l  142 (296)
T PRK15430         86 NWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLV  142 (296)
T ss_pred             HHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHH
Confidence            899999999999999999999999999999999999999999999999999999864

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=98.47  E-value=3.9e-06  Score=73.36  Aligned_cols=127  Identities=18%  Similarity=0.186  Sum_probs=93.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCCCCccchHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHH
Q 041251           73 TLFLILMWYTFSTFLTLYNKTLLGDDMGKFPAPLLMNTVHFSMQAILSKAIIWFWSHRFQHTVSMSWRDYYVRVVPTGLA  152 (213)
Q Consensus        73 ~~~~i~~w~~~Si~~~~~NK~ll~~~~~~Fp~P~~Lt~~q~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vlP~sl~  152 (213)
                      +..++...+.|+ +...+-|..++    +.+ |..++.++++++.++..+.....  +   ....++++ +...+..+++
T Consensus        10 ~~~~~~~~~iWg-~~~~~~K~~~~----~~~-p~~~~~~R~~~a~l~ll~~~~~~--~---~~~~~~~~-~~~~~~~g~~   77 (292)
T PRK11272         10 FGALFALYIIWG-STYLVIRIGVE----SWP-PLMMAGVRFLIAGILLLAFLLLR--G---HPLPTLRQ-WLNAALIGLL   77 (292)
T ss_pred             HHHHHHHHHHHh-hHHHHHHHHhc----cCC-HHHHHHHHHHHHHHHHHHHHHHh--C---CCCCcHHH-HHHHHHHHHH
Confidence            344666777888 67788888876    466 99999999999776655443321  1   11123444 4444555554


Q ss_pred             -HHHHHHHhhhhc-ccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251          153 -TALDVNLSNESL-VFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF  212 (213)
Q Consensus       153 -~~~~i~~~n~sL-~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l  212 (213)
                       +.....+-..++ ++++.+...++-.+.|+++.+++.+ .+||++++.+.++++.+.|+.+
T Consensus        78 ~~~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~l  138 (292)
T PRK11272         78 LLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVL  138 (292)
T ss_pred             HHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHH
Confidence             455667778888 9999999999999999999999986 5899999999999999988753

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.41  E-value=9.9e-07  Score=66.83  Aligned_cols=66  Identities=26%  Similarity=0.319  Sum_probs=58.0

Q ss_pred             HHHHHHHHH-HHHHHhhhhcccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251          146 VVPTGLATA-LDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF  212 (213)
Q Consensus       146 vlP~sl~~~-~~i~~~n~sL~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l  212 (213)
                      ++..+++.. ....+-.+|+++.+ +...++.++.|+|++++++++++||++.+.+.+++++..|+++
T Consensus        37 ~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~l  103 (113)
T PF13536_consen   37 LILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVIL  103 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Confidence            344455554 88889999999999 6888999999999999999999999999999999999999864

>PRK11689 aromatic amino acid exporter; Provisional

Probab=98.18  E-value=3.5e-05  Score=67.54  Aligned_cols=120  Identities=14%  Similarity=0.102  Sum_probs=84.2

Q ss_pred             HHHHHHHHHHHHHHHHhhcCCCCCccchHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHHHHH
Q 041251           78 LMWYTFSTFLTLYNKTLLGDDMGKFPAPLLMNTVHFSMQAILSKAIIWFWSHRFQHTVSMSWRDYYVRVVPTGLATALDV  157 (213)
Q Consensus        78 ~~w~~~Si~~~~~NK~ll~~~~~~Fp~P~~Lt~~q~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vlP~sl~~~~~i  157 (213)
                      ..-.+|+ +.....|..++    .+| |..+..+++.++.++...+.     +.++.++    +..+.++..++.+.+..
T Consensus        11 ~a~~~Wg-~~~~~~k~~~~----~~~-P~~~~~~R~~~a~l~l~~~~-----~~~~~~~----~~~~~~~~~~l~~~~~~   75 (295)
T PRK11689         11 IAILLWS-TMVGLIRGVSE----SLG-PVGGAAMIYSVSGLLLLLTV-----GFPRLRQ----FPKRYLLAGGLLFVSYE   75 (295)
T ss_pred             HHHHHHH-HHHHHHHHHHc----cCC-hHHHHHHHHHHHHHHHHHHc-----ccccccc----ccHHHHHHHhHHHHHHH
Confidence            3334555 56788899887    577 99999999988665543321     1111111    12233444566666666


Q ss_pred             HHhhhhccc----chHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251          158 NLSNESLVF----ISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF  212 (213)
Q Consensus       158 ~~~n~sL~~----vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l  212 (213)
                      .+.+.+++|    .+.....++-.+.|++++++++++.+||++++.++++++...|+++
T Consensus        76 ~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~l  134 (295)
T PRK11689         76 ICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAW  134 (295)
T ss_pred             HHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhh
Confidence            666666654    4556667888999999999999999999999999999998888753

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=98.17  E-value=8.8e-05  Score=62.93  Aligned_cols=119  Identities=21%  Similarity=0.184  Sum_probs=82.9

Q ss_pred             HHHHHHHHhhcCCCCCccchHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHHHHHHHhhhhcc
Q 041251           86 FLTLYNKTLLGDDMGKFPAPLLMNTVHFSMQAILSKAIIWFWSHRFQHTVSMSWRDYYVRVVPTGLATALDVNLSNESLV  165 (213)
Q Consensus        86 ~~~~~NK~ll~~~~~~Fp~P~~Lt~~q~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vlP~sl~~~~~i~~~n~sL~  165 (213)
                      ...++.|+...+  .+ +-+..+..+++.++.++........  +  +....+++++...+.-..+.......+-+.+++
T Consensus       142 ~~~~~~k~~~~~--~~-~~~~~~~~~~~~~~~~~l~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~  214 (260)
T TIGR00950       142 LGTVLYKRLVKK--EG-PELLQFTGWVLLLGALLLLPFAWFL--G--PNPQALSLQWGALLYLGLIGTALAYFLWNKGLT  214 (260)
T ss_pred             HHHHHHhHHhhc--CC-chHHHHHHHHHHHHHHHHHHHHHhc--C--CCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            445667777642  12 1134455566776655544432221  1  112234444433333444456788889999999


Q ss_pred             cchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeE
Q 041251          166 FISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVL  211 (213)
Q Consensus       166 ~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~  211 (213)
                      +.+.+...++..+.|++.+++++++.+|+++...++++++++.|+.
T Consensus       215 ~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~~  260 (260)
T TIGR00950       215 LVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAVL  260 (260)
T ss_pred             cCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcC
Confidence            9999999999999999999999999999999999999999999863

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=98.08  E-value=5.6e-05  Score=68.64  Aligned_cols=119  Identities=13%  Similarity=0.154  Sum_probs=82.3

Q ss_pred             HHHHHHhhcCCCCCccchHHHHHHHHHHHHHHHHHHHHHHhcC-ccc-ccccchHHHHHHHHHHHHHHHHHHHHhhhhcc
Q 041251           88 TLYNKTLLGDDMGKFPAPLLMNTVHFSMQAILSKAIIWFWSHR-FQH-TVSMSWRDYYVRVVPTGLATALDVNLSNESLV  165 (213)
Q Consensus        88 ~~~NK~ll~~~~~~Fp~P~~Lt~~q~~~~~~l~~~l~~~~~~~-~~~-~~~~~~~~~~~~vlP~sl~~~~~i~~~n~sL~  165 (213)
                      +++.|....    ++|.+..++++++++..+...+........ ... ....++.  ...++-.+++.++...+-|++++
T Consensus       205 ~il~~~~~~----~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~--~~~i~y~~i~t~lay~lw~~~v~  278 (358)
T PLN00411        205 FILQAHIMS----EYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVWIIHFDIT--LITIVTMAIITSVYYVIHSWTVR  278 (358)
T ss_pred             HHHHHHHHH----HcCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccceeccchH--HHHHHHHHHHHHHHHHHHHHHHh
Confidence            345555554    566566777777776655444332221110 000 0112221  22244455666667778899999


Q ss_pred             cchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251          166 FISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF  212 (213)
Q Consensus       166 ~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l  212 (213)
                      +++.+...+.-.+.|++.+++++++++|++++..+++.++|+.|+.+
T Consensus       279 ~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l  325 (358)
T PLN00411        279 HKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYA  325 (358)
T ss_pred             ccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999865

>COG2510 Predicted membrane protein [Function unknown]

Probab=98.02  E-value=7.5e-05  Score=58.39  Aligned_cols=120  Identities=17%  Similarity=0.172  Sum_probs=91.0

Q ss_pred             HHHHHHHHhhcCCCCCccchHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHHHHHHHhhhhcc
Q 041251           86 FLTLYNKTLLGDDMGKFPAPLLMNTVHFSMQAILSKAIIWFWSHRFQHTVSMSWRDYYVRVVPTGLATALDVNLSNESLV  165 (213)
Q Consensus        86 ~~~~~NK~ll~~~~~~Fp~P~~Lt~~q~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vlP~sl~~~~~i~~~n~sL~  165 (213)
                      ...++-|--++    +.+ |.+-|.++-++..+.+...+... .+......++.|. +..+.--++..+++-.+--.|++
T Consensus        17 L~~iF~KIGl~----~vd-p~~At~IRtiVi~~~l~~v~~~~-g~~~~~~~~~~k~-~lflilSGla~glswl~Yf~ALk   89 (140)
T COG2510          17 LTPIFAKIGLE----GVD-PDFATTIRTIVILIFLLIVLLVT-GNWQAGGEIGPKS-WLFLILSGLAGGLSWLLYFRALK   89 (140)
T ss_pred             HHHHHHHHhcc----ccC-ccHHHHHHHHHHHHHHHHHHHhc-CceecccccCcce-ehhhhHHHHHHHHHHHHHHHHHh
Confidence            66688888887    445 88888888887666665544332 2333222345543 33444556777888888888999


Q ss_pred             cchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251          166 FISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF  212 (213)
Q Consensus       166 ~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l  212 (213)
                      --..|-..=+-.++|+++++++++|.+||++.+++.++++|+.|+.+
T Consensus        90 ~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gail  136 (140)
T COG2510          90 KGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAIL  136 (140)
T ss_pred             cCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeee
Confidence            88888888888899999999999999999999999999999999875

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=97.98  E-value=0.00011  Score=64.47  Aligned_cols=118  Identities=19%  Similarity=0.232  Sum_probs=81.7

Q ss_pred             HHHHHHHHHHHHHHHHHhhcCCCCCccchHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHH-H
Q 041251           77 ILMWYTFSTFLTLYNKTLLGDDMGKFPAPLLMNTVHFSMQAILSKAIIWFWSHRFQHTVSMSWRDYYVRVVPTGLATA-L  155 (213)
Q Consensus        77 i~~w~~~Si~~~~~NK~ll~~~~~~Fp~P~~Lt~~q~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vlP~sl~~~-~  155 (213)
                      ++.-.+|+ +...+.|..++    +++ |..++++++.++++......  .  +  +  +.+++    .++..+++.. .
T Consensus        10 l~~~~~Wg-~~~~~~k~~~~----~~~-p~~~~~~R~~~a~~~l~~~~--~--~--~--~~~~~----~~~~~g~~~~~~   71 (299)
T PRK11453         10 LLVVVVWG-LNFVVIKVGLH----NMP-PLMLAGLRFMLVAFPAIFFV--A--R--P--KVPLN----LLLGYGLTISFG   71 (299)
T ss_pred             HHHHHHHh-hhHHHHHHHHh----cCC-HHHHHHHHHHHHHHHHHHHh--c--C--C--CCchH----HHHHHHHHHHHH
Confidence            34445666 44555688876    577 99999999988554432211  1  1  1  12232    2333444332 3


Q ss_pred             HHHHhhhhccc-chHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251          156 DVNLSNESLVF-ISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF  212 (213)
Q Consensus       156 ~i~~~n~sL~~-vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l  212 (213)
                      ...+...+++| +|.+...++-.+.|+++.++++++.+||++.+.+.++++.+.|+.+
T Consensus        72 ~~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~l  129 (299)
T PRK11453         72 QFAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLV  129 (299)
T ss_pred             HHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHH
Confidence            33344567777 7889999999999999999999999999999999999999998753

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=97.94  E-value=1.8e-05  Score=68.17  Aligned_cols=74  Identities=16%  Similarity=0.183  Sum_probs=66.3

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHhhhhcccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251          138 SWRDYYVRVVPTGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF  212 (213)
Q Consensus       138 ~~~~~~~~vlP~sl~~~~~i~~~n~sL~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l  212 (213)
                      ++++.++.. .-|++|++...+...++.+++.+.||+++.+..+++.+++++++++|.+.+.|+++++++.|+++
T Consensus        13 ~~~~~~~~~-vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~l   86 (244)
T PF04142_consen   13 SPKDTLKLA-VPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVL   86 (244)
T ss_pred             hHHHHHHHH-HHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHhe
Confidence            456655544 45677999999999999999999999999999999999999999999999999999999999875

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=97.85  E-value=9.2e-05  Score=56.39  Aligned_cols=62  Identities=18%  Similarity=0.062  Sum_probs=58.0

Q ss_pred             HHHHHHHHHhhhhcccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251          151 LATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF  212 (213)
Q Consensus       151 l~~~~~i~~~n~sL~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l  212 (213)
                      +++.+...+-..+++.+|++....+-++.+++++++++++++|+++++.++++.+|+.|+++
T Consensus        45 ~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~  106 (111)
T PRK15051         45 ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVI  106 (111)
T ss_pred             HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHH
Confidence            56788888999999999999999999999999999999999999999999999999999753

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=97.82  E-value=0.00028  Score=61.29  Aligned_cols=72  Identities=17%  Similarity=0.169  Sum_probs=63.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhcccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251          141 DYYVRVVPTGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF  212 (213)
Q Consensus       141 ~~~~~vlP~sl~~~~~i~~~n~sL~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l  212 (213)
                      +++..++..++.......+-..++++.+++..+.+-.+.|+++.++++++.+|+++.+.++++.+++.|+.+
T Consensus        61 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~l  132 (281)
T TIGR03340        61 TFWLLLAISAVANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLV  132 (281)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHH
Confidence            345556667777888888999999999999999999999999999999999999999999999999999753

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=97.78  E-value=0.00057  Score=59.75  Aligned_cols=105  Identities=9%  Similarity=0.037  Sum_probs=76.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHH-HHHHHHHHhhhhcccchHhHHHHHhhhhhHHH
Q 041251          105 PLLMNTVHFSMQAILSKAIIWFWSHRFQHTVSMSWRDYYVRVVPTGL-ATALDVNLSNESLVFISVTFATMCKSASPIFL  183 (213)
Q Consensus       105 P~~Lt~~q~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vlP~sl-~~~~~i~~~n~sL~~vsVsf~q~iKs~tPifv  183 (213)
                      +...+..|+.++.+...+.....  ........+.+.+. .++-.++ ...+...+-+.++++++.+...+.-.++|++.
T Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a  253 (292)
T PRK11272        177 GMMAGAAEMLAAGVVLLIASLLS--GERLTALPTLSGFL-ALGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVA  253 (292)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHc--CCcccccCCHHHHH-HHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHH
Confidence            45566788887666554433221  11111112343333 3333444 46677888999999999999999999999999


Q ss_pred             HHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251          184 LVFAFAFRLESPSIKLLGIIIIISIGVLF  212 (213)
Q Consensus       184 ~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l  212 (213)
                      +++++++.+|+++...+.+.++|+.|+.+
T Consensus       254 ~i~~~~~l~E~~t~~~iiG~~lIi~gv~~  282 (292)
T PRK11272        254 VLLGTGLGGETLSPIEWLALGVIVFAVVL  282 (292)
T ss_pred             HHHHHHHcCCCCcHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999988753

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=97.77  E-value=2.7e-06  Score=74.26  Aligned_cols=100  Identities=17%  Similarity=0.255  Sum_probs=77.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCcc-cccccchHHHHHHHHHHHHHHHHHHHHhhhhccc-chHhHHHHHhhhhhHHH
Q 041251          106 LLMNTVHFSMQAILSKAIIWFWSHRFQ-HTVSMSWRDYYVRVVPTGLATALDVNLSNESLVF-ISVTFATMCKSASPIFL  183 (213)
Q Consensus       106 ~~Lt~~q~~~~~~l~~~l~~~~~~~~~-~~~~~~~~~~~~~vlP~sl~~~~~i~~~n~sL~~-vsVsf~q~iKs~tPifv  183 (213)
                      .++|..||++.+.-..+.  .  .++. ..++++.|+|..    +-.+|....+++|.++++ +|+|.+-+.|+.+++.+
T Consensus        34 NLITFaqFlFia~eGlif--~--skf~~~k~kiplk~Y~i----~V~mFF~vnv~NN~al~f~I~~PlHiIfRsgsll~n  105 (330)
T KOG1583|consen   34 NLITFAQFLFIATEGLIF--T--SKFFTVKPKIPLKDYAI----TVAMFFIVNVTNNYALKFNIPMPLHIIFRSGSLLAN  105 (330)
T ss_pred             eehHHHHHHHHHHhceee--e--ccccccCCCCchhhhhe----ehheeeeeeeeccceeeecccceEEEEEecCcHHHH
Confidence            678899998755433221  1  1221 124566666654    445666677789999985 79999999999999999


Q ss_pred             HHHHHHhhccCCChhHHHhhhheeeeeEeC
Q 041251          184 LVFAFAFRLESPSIKLLGIIIIISIGVLFS  213 (213)
Q Consensus       184 ~ll~~l~~~e~~s~~~~lsl~lIv~Gv~lA  213 (213)
                      +++++++.++|+|.+.+.|++.+.+|++++
T Consensus       106 M~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIc  135 (330)
T KOG1583|consen  106 MILGWILLGKRYSLRQYSSVLMITIGIIIC  135 (330)
T ss_pred             HHHHHHhccceeehhhhhhHHhhhhhheeE
Confidence            999999999999999999999999999875

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=97.71  E-value=8.3e-05  Score=67.39  Aligned_cols=76  Identities=24%  Similarity=0.186  Sum_probs=69.9

Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHhhhhcccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251          137 MSWRDYYVRVVPTGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF  212 (213)
Q Consensus       137 ~~~~~~~~~vlP~sl~~~~~i~~~n~sL~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l  212 (213)
                      ++.++..+.-+-.+.++.+...+.|.||+|.+|+..+++-|++-.|+++++.++.+||+++.+++++++-++||++
T Consensus       153 ~t~~~~ak~sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GVii  228 (416)
T KOG2765|consen  153 LTATQTAKLSLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVII  228 (416)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEE
Confidence            3444667777888889999999999999999999999999999999999999999999999999999999999986

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=97.69  E-value=0.0015  Score=55.35  Aligned_cols=70  Identities=23%  Similarity=0.216  Sum_probs=63.2

Q ss_pred             HHHHHHHHHHHHHHHHHhhhhcccchHhHHHHHhhhhhHHHHHHHH-HhhccCCChhHHHhhhheeeeeEe
Q 041251          143 YVRVVPTGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAF-AFRLESPSIKLLGIIIIISIGVLF  212 (213)
Q Consensus       143 ~~~vlP~sl~~~~~i~~~n~sL~~vsVsf~q~iKs~tPifv~ll~~-l~~~e~~s~~~~lsl~lIv~Gv~l  212 (213)
                      ....+...+.......+-..++++++.+..+++.++.|+++.++++ ++++||++++.+++++.+..|+.+
T Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l  140 (292)
T COG0697          70 LLLLLLALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLL  140 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHh
Confidence            4567778888888888999999999999999999999999999997 667999999999999999999875

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=97.60  E-value=0.003  Score=49.30  Aligned_cols=131  Identities=17%  Similarity=0.161  Sum_probs=89.5

Q ss_pred             HHHHHHHHHHHHHhhcCC---CCCccchHHHHHHHHHHHHHHHHHHHHHHh-cCcccc----c--ccc-hHHHHHHHHHH
Q 041251           81 YTFSTFLTLYNKTLLGDD---MGKFPAPLLMNTVHFSMQAILSKAIIWFWS-HRFQHT----V--SMS-WRDYYVRVVPT  149 (213)
Q Consensus        81 ~~~Si~~~~~NK~ll~~~---~~~Fp~P~~Lt~~q~~~~~~l~~~l~~~~~-~~~~~~----~--~~~-~~~~~~~vlP~  149 (213)
                      .++......+.|.+++++   +.+.+ |+.+....-..+++.+.+...... .+..+.    .  +.. ..+.+..++..
T Consensus         9 ~~~~al~~v~~~~~~~~~~~~~~~~~-~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (153)
T PF03151_consen    9 SLFSALRNVLIKKLLKKVSSNSKKLN-PLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNFIFLLILS   87 (153)
T ss_pred             HHHHHHHHHHHHHHHhcccccccCCC-HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHHHHHHHHH
Confidence            344446666777777652   23555 555544444444444444332211 111010    0  111 22446667777


Q ss_pred             HHHHHHHHHHhhhhcccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251          150 GLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF  212 (213)
Q Consensus       150 sl~~~~~i~~~n~sL~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l  212 (213)
                      +++..+....+.+.+++.|.-.++++.....+++.++++++++|+++...++++++.+.|+.+
T Consensus        88 ~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~  150 (153)
T PF03151_consen   88 GLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLL  150 (153)
T ss_pred             HHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHhe
Confidence            888888889999999999999999999999999999999999999999999999999999764

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=97.48  E-value=0.0021  Score=56.23  Aligned_cols=104  Identities=13%  Similarity=0.207  Sum_probs=73.7

Q ss_pred             HHHHhhcCCCCCccchHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHHHHHHHhhhhcccchH
Q 041251           90 YNKTLLGDDMGKFPAPLLMNTVHFSMQAILSKAIIWFWSHRFQHTVSMSWRDYYVRVVPTGLATALDVNLSNESLVFISV  169 (213)
Q Consensus        90 ~NK~ll~~~~~~Fp~P~~Lt~~q~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vlP~sl~~~~~i~~~n~sL~~vsV  169 (213)
                      +.|++++    .+| |..+..+++++++++..++.+..  +    .+.++++ .+..+..+++......+...+++|+|.
T Consensus        30 ~~K~~~~----~~~-~~~~~~~R~~~a~l~l~~~~~~~--~----~~~~~~~-~~~~~~~g~~~~~~~~~~~~al~~~~~   97 (293)
T PRK10532         30 LAKSLFP----LVG-APGVTALRLALGTLILIAIFKPW--R----LRFAKEQ-RLPLLFYGVSLGGMNYLFYLSIQTVPL   97 (293)
T ss_pred             HHHHHHH----HcC-HHHHHHHHHHHHHHHHHHHHhHH--h----ccCCHHH-HHHHHHHHHHHHHHHHHHHHHHhcccH
Confidence            6899987    477 88899999999776654432211  1    1234444 444666777788888888999999999


Q ss_pred             hHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeE
Q 041251          170 TFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVL  211 (213)
Q Consensus       170 sf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~  211 (213)
                      +...++-.+.|+++++++.    |++.....  +.+.+.|+.
T Consensus        98 ~~a~~l~~t~Pi~~~ll~~----~~~~~~~~--~~i~~~Gv~  133 (293)
T PRK10532         98 GIAVALEFTGPLAVALFSS----RRPVDFVW--VVLAVLGLW  133 (293)
T ss_pred             HHHHHHHHHHHHHHHHHhc----CChHHHHH--HHHHHHHHh
Confidence            9999999999999998863    55554444  334455543

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=97.34  E-value=0.0051  Score=53.81  Aligned_cols=63  Identities=19%  Similarity=0.043  Sum_probs=56.7

Q ss_pred             HHHHHHHHHHhhhhcccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251          150 GLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF  212 (213)
Q Consensus       150 sl~~~~~i~~~n~sL~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l  212 (213)
                      -++..+...+-|.++++++.+...++-.++|++.+++++++.+|+++...+++..+|+.|++.
T Consensus       216 v~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~  278 (293)
T PRK10532        216 ILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMG  278 (293)
T ss_pred             HHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHH
Confidence            334567777889999999999999999999999999999999999999999999999888653

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=97.33  E-value=0.0057  Score=53.58  Aligned_cols=76  Identities=12%  Similarity=-0.061  Sum_probs=62.6

Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHhhhhcccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251          137 MSWRDYYVRVVPTGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF  212 (213)
Q Consensus       137 ~~~~~~~~~vlP~sl~~~~~i~~~n~sL~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l  212 (213)
                      .++..+...+.-..+..++...+-+.++++.+.+-..++-.++|++..++++++.+|+++...+++.++|+.|+.+
T Consensus       209 ~~~~~~~~l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l  284 (299)
T PRK11453        209 IDMTTILSLMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYI  284 (299)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHH
Confidence            4554444433334466667888888999999999999999999999999999999999999999999999998764

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=97.24  E-value=0.001  Score=57.77  Aligned_cols=71  Identities=18%  Similarity=0.135  Sum_probs=62.5

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhcccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251          142 YYVRVVPTGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF  212 (213)
Q Consensus       142 ~~~~vlP~sl~~~~~i~~~n~sL~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l  212 (213)
                      ++..+.-..++..+...+-+.++++.+.+.......++|++.+++++++.+|+++...+.+..+|+.|+.+
T Consensus       210 ~~~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       210 ILPSATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence            34445556677778888999999999999999999999999999999999999999999999999999864

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=97.21  E-value=0.0023  Score=56.01  Aligned_cols=123  Identities=10%  Similarity=-0.024  Sum_probs=78.5

Q ss_pred             HHHHHHHHhhcCCCCCccchHHHHHHHHHHHHHHHHHHHHHHhcCcc--cccc------cchHHHHHHHHHHHH-HHHHH
Q 041251           86 FLTLYNKTLLGDDMGKFPAPLLMNTVHFSMQAILSKAIIWFWSHRFQ--HTVS------MSWRDYYVRVVPTGL-ATALD  156 (213)
Q Consensus        86 ~~~~~NK~ll~~~~~~Fp~P~~Lt~~q~~~~~~l~~~l~~~~~~~~~--~~~~------~~~~~~~~~vlP~sl-~~~~~  156 (213)
                      ...++.|...+.  .+++ |+.++..|+..+.+......... ....  +...      ..........+..++ ++...
T Consensus       159 ~~~v~~k~~~~~--~~~~-~~~~~~~~~~~~~~~l~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (302)
T TIGR00817       159 SRNIFSKKAMTI--KSLD-KTNLYAYISIMSLFLLSPPAFIT-EGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFY  234 (302)
T ss_pred             HHHHHHHHhhcc--CCCC-cccHHHHHHHHHHHHHHHHHHHH-cchHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHH
Confidence            445566666652  1344 77788888877766555443321 1100  0000      000000111112222 33333


Q ss_pred             HHHhhhhcccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251          157 VNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF  212 (213)
Q Consensus       157 i~~~n~sL~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l  212 (213)
                      +.+.+.++++++-..+.+.-...|++++++++++.+|+++...+++..+++.|+.+
T Consensus       235 ~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l  290 (302)
T TIGR00817       235 QQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFL  290 (302)
T ss_pred             HHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHH
Confidence            35566799999999999999999999999999999999999999999999999754

specificities overlap.

>PRK11689 aromatic amino acid exporter; Provisional

Probab=97.18  E-value=0.0083  Score=52.52  Aligned_cols=76  Identities=12%  Similarity=0.129  Sum_probs=65.2

Q ss_pred             ccchHHHHHHHHHHHHHHHHHHHHhhhhcccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251          136 SMSWRDYYVRVVPTGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF  212 (213)
Q Consensus       136 ~~~~~~~~~~vlP~sl~~~~~i~~~n~sL~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l  212 (213)
                      ..+++.+.. ++-.++...+...+-|.++++.+.+...+.-.++|++.+++++++.+|+++...++++++|+.|+.+
T Consensus       209 ~~~~~~~~~-l~~~~~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~  284 (295)
T PRK11689        209 VFSLPAIIK-LLLAAAAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLL  284 (295)
T ss_pred             cCCHHHHHH-HHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHH
Confidence            355544333 4456677778888999999999999999999999999999999999999999999999999999754

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=96.96  E-value=0.015  Score=52.42  Aligned_cols=139  Identities=17%  Similarity=0.136  Sum_probs=94.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCccchHHHHHHHHHHHHHHHHHHHHHHh----cC----cccccccchHHH
Q 041251           71 LKTLFLILMWYTFSTFLTLYNKTLLGDDMGKFPAPLLMNTVHFSMQAILSKAIIWFWS----HR----FQHTVSMSWRDY  142 (213)
Q Consensus        71 l~~~~~i~~w~~~Si~~~~~NK~ll~~~~~~Fp~P~~Lt~~q~~~~~~l~~~l~~~~~----~~----~~~~~~~~~~~~  142 (213)
                      .+.+..+.. .+-+.++.+.-|+--..++..|- |.+...+-=+...++|..+...-.    .+    ..++..-.|++.
T Consensus        15 ~k~~~l~~~-t~~~~~l~l~l~ys~~~~~~~f~-~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~   92 (345)
T KOG2234|consen   15 MKYLSLIVL-TAQNTALTLLLRYSRTREKPMFL-PTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRET   92 (345)
T ss_pred             HHHHHHHHH-HHHHhhHHHHHHHHhcCCCCCcc-hhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHH
Confidence            444443333 34455777777777655444554 555554444445555555433211    01    111222234454


Q ss_pred             HHHHHHHHHHHHHHHHHhhhhcccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251          143 YVRVVPTGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF  212 (213)
Q Consensus       143 ~~~vlP~sl~~~~~i~~~n~sL~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l  212 (213)
                      .+ +..-+++|++.+.+.-.++.+++-++||+.--+....+.++.+++.++|.+++.|.++++.+.|+.+
T Consensus        93 lk-~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~  161 (345)
T KOG2234|consen   93 LK-VSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVAL  161 (345)
T ss_pred             HH-HHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHH
Confidence            44 4455678888888899999999999999999999999999999999999999999999999999864

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=96.93  E-value=0.0042  Score=54.84  Aligned_cols=129  Identities=20%  Similarity=0.186  Sum_probs=90.0

Q ss_pred             HHHHHHHHHHHHHhhcC--CC-CCccchHHHHHHHHHHHHHHHHHHHHHHhcCc-----c-------cccccchHHHHHH
Q 041251           81 YTFSTFLTLYNKTLLGD--DM-GKFPAPLLMNTVHFSMQAILSKAIIWFWSHRF-----Q-------HTVSMSWRDYYVR  145 (213)
Q Consensus        81 ~~~Si~~~~~NK~ll~~--~~-~~Fp~P~~Lt~~q~~~~~~l~~~l~~~~~~~~-----~-------~~~~~~~~~~~~~  145 (213)
                      .+++..=++.-||.-+-  ++ .+|..|+.-+.+ |+..=.+|...-+..+++.     .       ++.+-+.+  -..
T Consensus        12 vvsGs~Ntl~aKwadsi~~eg~pgfqhpvlqal~-mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~--p~l   88 (372)
T KOG3912|consen   12 VVSGSFNTLVAKWADSIQAEGSPGFQHPVLQALL-MFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFN--PVL   88 (372)
T ss_pred             hhhccHHHHHHHHHHhhhhhCCCccccHHHHHHH-HHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCC--cce
Confidence            45565667888998442  22 248888876555 3333323322222211111     0       11111222  335


Q ss_pred             HHHHHHHHHHHHHHhhhhcccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251          146 VVPTGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF  212 (213)
Q Consensus       146 vlP~sl~~~~~i~~~n~sL~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l  212 (213)
                      .+|-++|-..+--+-+.+|.+.+-|-+||+|-+..+|+-+++..+.+++...+.|+++.-++.|+++
T Consensus        89 fl~Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlvi  155 (372)
T KOG3912|consen   89 FLPPALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVI  155 (372)
T ss_pred             ecChHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhhe
Confidence            6788999999999999999999999999999999999999999999999999999999998888754

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=96.89  E-value=0.025  Score=51.06  Aligned_cols=63  Identities=10%  Similarity=0.053  Sum_probs=52.8

Q ss_pred             HHHHHHHHHHhhhhcccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251          150 GLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF  212 (213)
Q Consensus       150 sl~~~~~i~~~n~sL~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l  212 (213)
                      ++++.+.+.++-.++++++...+++.-.+.|+++.++++++.+|+.+...+++.+++++|+.+
T Consensus       283 ~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~l  345 (350)
T PTZ00343        283 GVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALL  345 (350)
T ss_pred             HHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHH
Confidence            333333333333699999999999999999999999999999999999999999999999753

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=96.69  E-value=0.0033  Score=48.68  Aligned_cols=67  Identities=13%  Similarity=0.154  Sum_probs=59.2

Q ss_pred             HHHHHHHHHHHHHHhhhhcccchHhHHHHH-hhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251          146 VVPTGLATALDVNLSNESLVFISVTFATMC-KSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF  212 (213)
Q Consensus       146 vlP~sl~~~~~i~~~n~sL~~vsVsf~q~i-Ks~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l  212 (213)
                      .+...++++.+..+-..+++++|++...-+ .....+.+.+.++++++|+.++..++++.+|++|+.+
T Consensus        33 ~~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~  100 (120)
T PRK10452         33 FILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVL  100 (120)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHH
Confidence            355778888899999999999999987666 5688999999999999999999999999999999853

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=96.63  E-value=0.045  Score=47.93  Aligned_cols=66  Identities=12%  Similarity=0.246  Sum_probs=58.8

Q ss_pred             HHHHHHHHHHHHHHhhhhcccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeE
Q 041251          146 VVPTGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVL  211 (213)
Q Consensus       146 vlP~sl~~~~~i~~~n~sL~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~  211 (213)
                      ++-.++...+...+-+.++++.+-+.....-..+|++.+++++++.+|+++...+++..+|+.|+.
T Consensus       216 ~~~~g~~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~  281 (296)
T PRK15430        216 LIAAGIVTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALA  281 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence            444555677888899999999999999999999999999999999999999999999999977654

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=96.48  E-value=0.006  Score=47.71  Aligned_cols=67  Identities=21%  Similarity=0.090  Sum_probs=57.9

Q ss_pred             HHHHHHHHHHHHHHhhhhcccchHhHHHHHhhhhhHHHHHHHHH--hhccCCChhHHHhhhheeeeeEe
Q 041251          146 VVPTGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFA--FRLESPSIKLLGIIIIISIGVLF  212 (213)
Q Consensus       146 vlP~sl~~~~~i~~~n~sL~~vsVsf~q~iKs~tPifv~ll~~l--~~~e~~s~~~~lsl~lIv~Gv~l  212 (213)
                      +.-.-+++.++..+=+.+++.++++...-+-+..++++.+.++.  +++|+.++..++++++|+.|+.+
T Consensus        51 i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~l  119 (129)
T PRK02971         51 VLLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWL  119 (129)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHH
Confidence            34456678888888999999999999998888888888888775  79999999999999999999864

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=96.42  E-value=0.01  Score=45.15  Aligned_cols=65  Identities=17%  Similarity=0.215  Sum_probs=56.9

Q ss_pred             HHHHHHHHHHHHhhhhcccchHhHHHHHhh-hhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251          148 PTGLATALDVNLSNESLVFISVTFATMCKS-ASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF  212 (213)
Q Consensus       148 P~sl~~~~~i~~~n~sL~~vsVsf~q~iKs-~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l  212 (213)
                      -.-+++..+..+-..+++.+|++...-+-+ ...+.+.+.++++++|+.++..++++.+|+.|+++
T Consensus        35 ~~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~  100 (110)
T PRK09541         35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLV  100 (110)
T ss_pred             HHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHH
Confidence            356677888888889999999999888865 57889999999999999999999999999999853

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=96.25  E-value=0.064  Score=47.07  Aligned_cols=67  Identities=19%  Similarity=0.090  Sum_probs=56.6

Q ss_pred             HHHHHHHHHHHHHHhhhhcccchHhHHHHHhh-hhhHHHHHHHHHhhccCCChhH----HHhhhheeeeeEe
Q 041251          146 VVPTGLATALDVNLSNESLVFISVTFATMCKS-ASPIFLLVFAFAFRLESPSIKL----LGIIIIISIGVLF  212 (213)
Q Consensus       146 vlP~sl~~~~~i~~~n~sL~~vsVsf~q~iKs-~tPifv~ll~~l~~~e~~s~~~----~lsl~lIv~Gv~l  212 (213)
                      -+-.+++++.+..+...|.+++.++....+-. +.+++..+.+.++++|+.+.+.    ++++++++.|+.+
T Consensus        62 g~l~G~~w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l  133 (290)
T TIGR00776        62 GLLSGAFWALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYL  133 (290)
T ss_pred             HHHHHHHHHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHhe
Confidence            33445557888888889999999999988887 7788889999999999999998    9999999999765

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=96.23  E-value=0.15  Score=43.03  Aligned_cols=75  Identities=17%  Similarity=0.224  Sum_probs=61.7

Q ss_pred             cchHHHHHHHHHHHHHHH-HHHHHhhhhcccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251          137 MSWRDYYVRVVPTGLATA-LDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF  212 (213)
Q Consensus       137 ~~~~~~~~~vlP~sl~~~-~~i~~~n~sL~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l  212 (213)
                      .+++. +..+...+++-. ....+-+.+++..+.+...++-.+.|++.+++++++.+|+++...+.+.++++.|+.+
T Consensus       209 ~~~~~-~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l  284 (292)
T COG0697         209 ILSRA-WLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLL  284 (292)
T ss_pred             CCHHH-HHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHH
Confidence            34433 334445555555 5888889999999999999999999999999999999999999999999999988754

>PRK11431 multidrug efflux system protein; Provisional

Probab=96.22  E-value=0.018  Score=43.53  Aligned_cols=66  Identities=17%  Similarity=0.049  Sum_probs=56.6

Q ss_pred             HHHHHHHHHHHHHhhhhcccchHhHHHHHhh-hhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251          147 VPTGLATALDVNLSNESLVFISVTFATMCKS-ASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF  212 (213)
Q Consensus       147 lP~sl~~~~~i~~~n~sL~~vsVsf~q~iKs-~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l  212 (213)
                      +...+++..+..+-..+++.+|++..-.+=+ ...+.+.+.++++++|+.++..++++.+|+.|++.
T Consensus        33 ~~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~   99 (105)
T PRK11431         33 IITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIG   99 (105)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHh
Confidence            3457788888889999999999998655544 67899999999999999999999999999999853

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=96.20  E-value=0.033  Score=42.42  Aligned_cols=66  Identities=9%  Similarity=-0.031  Sum_probs=55.5

Q ss_pred             HHHHHHHHHHHHHhhhhcccchHhHHHHHh-hhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251          147 VPTGLATALDVNLSNESLVFISVTFATMCK-SASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF  212 (213)
Q Consensus       147 lP~sl~~~~~i~~~n~sL~~vsVsf~q~iK-s~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l  212 (213)
                      +-..++++.+..+-..+++.+|++..-.+= ....+.+.+.++++++|+.++..++++.+|+.|++.
T Consensus        39 ~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~  105 (109)
T PRK10650         39 ILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVM  105 (109)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHH
Confidence            345667777888889999999999865544 467889999999999999999999999999999853

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=96.19  E-value=0.0037  Score=54.50  Aligned_cols=135  Identities=16%  Similarity=0.211  Sum_probs=93.4

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCccchHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHH
Q 041251           67 AADVLKTLFLILMWYTFSTFLTLYNKTLLGDDMGKFPAPLLMNTVHFSMQAILSKAIIWFWSHRFQHTVSMSWRDYYVRV  146 (213)
Q Consensus        67 ~~~~l~~~~~i~~w~~~Si~~~~~NK~ll~~~~~~Fp~P~~Lt~~q~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~v  146 (213)
                      -+|.+...+..=+--.++.+..+.|.++-+.   +.+-|.+=+++....-+++=..+..+. .   +.....|++|    
T Consensus        13 tkk~li~~~LGQiLSL~~t~~a~tss~la~k---~iN~Pt~QtFl~Y~LLalVY~~~~~fR-~---~~~~~~~~hY----   81 (336)
T KOG2766|consen   13 TKKTLIGLGLGQILSLLITSTAFTSSELARK---GINAPTSQTFLNYVLLALVYGPIMLFR-R---KYIKAKWRHY----   81 (336)
T ss_pred             chhhhheeeHHHHHHHHHHcchhhhHHHHhc---cCCCccHHHHHHHHHHHHHHhhHHHhh-h---HHHHHHHHHh----
Confidence            3455555555544456666777888887663   467787766655544333222222211 1   2223445443    


Q ss_pred             HHHHHHHHHHHHHhhhhcccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251          147 VPTGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF  212 (213)
Q Consensus       147 lP~sl~~~~~i~~~n~sL~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l  212 (213)
                      +.++++-.-++.+--.|++|.+..-.+.+-+-..+.+++++|+|.+.|+.++.+.++++.++||++
T Consensus        82 illa~~DVEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~Gvvm  147 (336)
T KOG2766|consen   82 ILLAFVDVEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVM  147 (336)
T ss_pred             hheeEEeecccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEE
Confidence            445555555666667899999999999999999999999999999999999999999999999876

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=96.13  E-value=0.081  Score=46.42  Aligned_cols=66  Identities=15%  Similarity=0.001  Sum_probs=58.8

Q ss_pred             HHHHHHHHHHHHHhhhhcc-cchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHH----HhhhheeeeeEe
Q 041251          147 VPTGLATALDVNLSNESLV-FISVTFATMCKSASPIFLLVFAFAFRLESPSIKLL----GIIIIISIGVLF  212 (213)
Q Consensus       147 lP~sl~~~~~i~~~n~sL~-~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~----lsl~lIv~Gv~l  212 (213)
                      +..++++.....+-..+++ +++.+...++-...|+...++++++.+|+.+.+.+    ++.++|++|+.+
T Consensus       215 ~~~Gi~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l  285 (290)
T TIGR00776       215 ILPGLMWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANI  285 (290)
T ss_pred             HHHHHHHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHH
Confidence            3378888888888888999 99999999999999999999999999999999999    888888888754

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=96.02  E-value=0.0013  Score=57.54  Aligned_cols=63  Identities=27%  Similarity=0.338  Sum_probs=55.4

Q ss_pred             HHHHHHHHHHhhhhcccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251          150 GLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF  212 (213)
Q Consensus       150 sl~~~~~i~~~n~sL~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l  212 (213)
                      ++.-..++.+...|++|.|++=..++--++|+|+.++++++++|+++....+..+.-..||++
T Consensus       104 g~mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVL  166 (346)
T KOG4510|consen  104 GFMGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVL  166 (346)
T ss_pred             hhhhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEE
Confidence            445556777788999999999999999999999999999999999999888888888888875

>TIGR00803 nst UDP-galactose transporter

Probab=95.95  E-value=0.2  Score=41.79  Aligned_cols=67  Identities=12%  Similarity=0.003  Sum_probs=59.5

Q ss_pred             HHHHHHHHHHHHHHhhhhcccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251          146 VVPTGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF  212 (213)
Q Consensus       146 vlP~sl~~~~~i~~~n~sL~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l  212 (213)
                      ++-+.++.+..-.+-.+.++|.+..+..++-++.++++.++++++.+++++...+++..++..|+.+
T Consensus       155 ~~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l  221 (222)
T TIGR00803       155 VWIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL  221 (222)
T ss_pred             HHHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence            3445566677777889999999999999999999999999999999999999999999999999875

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=95.75  E-value=0.027  Score=42.73  Aligned_cols=65  Identities=20%  Similarity=0.094  Sum_probs=55.4

Q ss_pred             HHHHHHHHHHHHHhhhhcccchHhHHH-HHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeE
Q 041251          147 VPTGLATALDVNLSNESLVFISVTFAT-MCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVL  211 (213)
Q Consensus       147 lP~sl~~~~~i~~~n~sL~~vsVsf~q-~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~  211 (213)
                      +-..+++..+..+--.|++.+|++..- +---.-.+.+.+.++++++|+.+...++++.+++.|++
T Consensus        34 il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi   99 (106)
T COG2076          34 ILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVI   99 (106)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHH
Confidence            345677888888889999999999854 44455788999999999999999999999999999975

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=95.40  E-value=0.34  Score=42.57  Aligned_cols=135  Identities=11%  Similarity=0.136  Sum_probs=88.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCCCCccchHHH-HHHHHHHHHHHHHHHHHHH-hcCccccccc--chHHHHHHHHH
Q 041251           73 TLFLILMWYTFSTFLTLYNKTLLGDDMGKFPAPLLM-NTVHFSMQAILSKAIIWFW-SHRFQHTVSM--SWRDYYVRVVP  148 (213)
Q Consensus        73 ~~~~i~~w~~~Si~~~~~NK~ll~~~~~~Fp~P~~L-t~~q~~~~~~l~~~l~~~~-~~~~~~~~~~--~~~~~~~~vlP  148 (213)
                      -.++++++.++......+++++++.  ++-+ |.-+ -..|++ +.++..+..... .....+..+.  ...+....++.
T Consensus       155 G~~ll~~sl~~~a~~~~~qe~~~~~--~~~~-~~~~mfy~n~~-~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~  230 (303)
T PF08449_consen  155 GIILLLLSLLLDAFTGVYQEKLFKK--YGKS-PWELMFYTNLF-SLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLL  230 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHH--hCCc-HHHHHHHHHHH-HHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHH
Confidence            4555667777777888999999875  3433 3333 233333 333333222210 0111111000  11134566777


Q ss_pred             HHHHHHHHHHHhhhhcccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeE
Q 041251          149 TGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVL  211 (213)
Q Consensus       149 ~sl~~~~~i~~~n~sL~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~  211 (213)
                      .+++.+....+-+...+..+--..+++..+--+++++++++++++++++..+.+++++..|..
T Consensus       231 ~s~~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~  293 (303)
T PF08449_consen  231 FSLTGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIF  293 (303)
T ss_pred             HHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHH
Confidence            778888888877877787777777888888889999999999999999999999999998865

; GO: 0055085 transmembrane transport

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=95.26  E-value=0.043  Score=42.05  Aligned_cols=69  Identities=17%  Similarity=0.066  Sum_probs=55.5

Q ss_pred             HHHHHHHHHHHHHHHHHhhhhcccchHhHHHHH-hhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251          143 YVRVVPTGLATALDVNLSNESLVFISVTFATMC-KSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF  212 (213)
Q Consensus       143 ~~~vlP~sl~~~~~i~~~n~sL~~vsVsf~q~i-Ks~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l  212 (213)
                      .+.++|..+-.++++++ ...+...++|...-+ -+++=+|+++.+++++.|..+.++++++++++.|+.+
T Consensus        42 ~~y~ipf~lNq~GSv~f-~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~L  111 (113)
T PF10639_consen   42 PKYIIPFLLNQSGSVLF-FLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVAL  111 (113)
T ss_pred             HHHHHHHHHHHHHHHHH-HHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeee
Confidence            44567877777777664 456666777776655 4888999999999999999999999999999999986

Many members are annotated as potential transmembrane proteins.

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=94.53  E-value=0.084  Score=38.69  Aligned_cols=57  Identities=16%  Similarity=0.031  Sum_probs=34.9

Q ss_pred             HHHHHHHHHHhhhhcccchHhHHH-HHhhhhhHHHHHHHHHhhccCCChhHHHhhhhe
Q 041251          150 GLATALDVNLSNESLVFISVTFAT-MCKSASPIFLLVFAFAFRLESPSIKLLGIIIII  206 (213)
Q Consensus       150 sl~~~~~i~~~n~sL~~vsVsf~q-~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lI  206 (213)
                      -.++.++..+-..+++++|++..- +......+.+.+.+.++++|+.++..++++.+|
T Consensus        36 ~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   36 VVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            347888888999999999999874 456688999999999999999999999998764

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=93.90  E-value=0.88  Score=41.17  Aligned_cols=58  Identities=22%  Similarity=0.165  Sum_probs=46.9

Q ss_pred             HHHHHhhhhcccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251          155 LDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF  212 (213)
Q Consensus       155 ~~i~~~n~sL~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l  212 (213)
                      ....+....+++-+-.+..+-=.++.++.++++.+++++++++.-+++.++|++|.++
T Consensus       245 ~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vv  302 (334)
T PF06027_consen  245 LFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVV  302 (334)
T ss_pred             HHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhhe
Confidence            3333446666666666666766788999999999999999999999999999999875

Some of the sequences in this family are annotated as putative membrane proteins.

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=93.55  E-value=0.13  Score=45.74  Aligned_cols=67  Identities=19%  Similarity=0.071  Sum_probs=58.8

Q ss_pred             HHHHHHHHHHHHHHhhhhcccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251          146 VVPTGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF  212 (213)
Q Consensus       146 vlP~sl~~~~~i~~~n~sL~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l  212 (213)
                      |+-.-+.++++..++-.|+.+.|.+..|-+-+..-++.++++..+.+|+.+.+.+.++.+++.|+.+
T Consensus        53 W~~G~~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~l  119 (300)
T PF05653_consen   53 WWIGLLLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVL  119 (300)
T ss_pred             HHHHHHHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhhee
Confidence            3334455677778888899999999999999999999999999999999999999999999999764

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=92.58  E-value=0.02  Score=48.39  Aligned_cols=77  Identities=14%  Similarity=0.100  Sum_probs=70.3

Q ss_pred             ccchHHHHHHHHHHHHHHHHHHHHhhhhcccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251          136 SMSWRDYYVRVVPTGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF  212 (213)
Q Consensus       136 ~~~~~~~~~~vlP~sl~~~~~i~~~n~sL~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l  212 (213)
                      .++.|.++++..|.++++.+..+.--.+|+.++-+-.+.+-+.--.|+.+++++..++|+..-++++.++-++|+++
T Consensus        46 G~nik~~~~~taPF~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVm  122 (290)
T KOG4314|consen   46 GFNIKLFFIRTAPFSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVM  122 (290)
T ss_pred             CceeeeeeeeecceEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEE
Confidence            45556678889999999999999999999999999999999999999999999999999999999999999999875

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=92.41  E-value=6.5  Score=33.78  Aligned_cols=131  Identities=17%  Similarity=0.146  Sum_probs=81.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCccchHHHHHHHHHHHHHHHHHHHHHHhcCcc-cccccchHHHHHHHHH
Q 041251           70 VLKTLFLILMWYTFSTFLTLYNKTLLGDDMGKFPAPLLMNTVHFSMQAILSKAIIWFWSHRFQ-HTVSMSWRDYYVRVVP  148 (213)
Q Consensus        70 ~l~~~~~i~~w~~~Si~~~~~NK~ll~~~~~~Fp~P~~Lt~~q~~~~~~l~~~l~~~~~~~~~-~~~~~~~~~~~~~vlP  148 (213)
                      .+.-.+.+++-.++|.....++.+++...  +  -|+.+--+|+.+..++..++......+.. .+... ++.|-...+.
T Consensus       112 ~~~G~~~vl~~~~~S~~agVy~E~~lK~~--~--~s~~~~N~qL~~~gi~~~~~~~~~~~~~~~~~~g~-f~G~~~~~~~  186 (244)
T PF04142_consen  112 PLLGLLAVLAAAFLSGFAGVYFEKLLKRS--N--VSLWIQNMQLYLFGILFNLLALLLSDGSAISESGF-FHGYSWWVWI  186 (244)
T ss_pred             hHhHHHHHHHHHHHHHHHHHHHHHHhccc--c--hhHHHHHHHHHHHHHHHHHHHHhcccccccccCCc-hhhcchHHHH
Confidence            45556666776777778888888888753  2  47777778876655544444332211111 01111 1111112233


Q ss_pred             HHHHHHHHHHHhhhhcccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhh
Q 041251          149 TGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIII  205 (213)
Q Consensus       149 ~sl~~~~~i~~~n~sL~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~l  205 (213)
                      +.+..+.+=....+.+||..-=.-...-+.+.+.+.++++++.+.+++..-.++..+
T Consensus       187 ~i~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~~  243 (244)
T PF04142_consen  187 VIFLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAAL  243 (244)
T ss_pred             HHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhheec
Confidence            444555444456677888887677777788999999999999999999988776544

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=92.08  E-value=2.5  Score=37.47  Aligned_cols=126  Identities=17%  Similarity=0.143  Sum_probs=70.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCCCCCccchHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHH
Q 041251           74 LFLILMWYTFSTFLTLYNKTLLGDDMGKFPAPLLMNTVHFSMQAILSKAIIWFWSHRFQHTVSMSWRDYYVRVVPTGLAT  153 (213)
Q Consensus        74 ~~~i~~w~~~Si~~~~~NK~ll~~~~~~Fp~P~~Lt~~q~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~vlP~sl~~  153 (213)
                      ++.+..|..|+ .+-++-|.+-.     -| +.=+..-+.+-++.+..++.... .+.+...+. ++ ..+.  -..+..
T Consensus        10 l~~l~Ay~lwG-~lp~y~kll~~-----~~-~~eIlahRviwS~~~~l~ll~~~-r~~~~~~~~-~~-~p~~--~~~~~l   77 (293)
T COG2962          10 LLALLAYLLWG-LLPLYFKLLEP-----LP-ATEILAHRVIWSFPFMLALLFLL-RQWRELKQL-LK-QPKT--LLMLAL   77 (293)
T ss_pred             HHHHHHHHHHH-HHHHHHHHHcc-----CC-HHHHHHHHHHHHHHHHHHHHHHH-hhhHHHHHH-Hh-CcHH--HHHHHH
Confidence            44567788888 67777888742     33 33343444444444444433322 111111110 11 1111  123333


Q ss_pred             HHHHHHhhhhcccchHhHHHHHhh-----hhhHHHHHHHHHhhccCCChhHHHhhhheeeeeE
Q 041251          154 ALDVNLSNESLVFISVTFATMCKS-----ASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVL  211 (213)
Q Consensus       154 ~~~i~~~n~sL~~vsVsf~q~iKs-----~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~  211 (213)
                      +.-...+||.+-.-.+.=.+++-+     .-|++.++++.+|.+||.+...+.++.+-..||.
T Consensus        78 ~a~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~  140 (293)
T COG2962          78 TALLIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVL  140 (293)
T ss_pred             HHHHHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHH
Confidence            444445666554333333333332     4699999999999999999999999999888875

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=90.52  E-value=7.3  Score=34.62  Aligned_cols=69  Identities=16%  Similarity=0.174  Sum_probs=60.2

Q ss_pred             HHHHHHHHHHHHHHHHHhhhhcccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeE
Q 041251          143 YVRVVPTGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVL  211 (213)
Q Consensus       143 ~~~vlP~sl~~~~~i~~~n~sL~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~  211 (213)
                      ...++-.++..+....+-..+-+.+|.|+.-++.=.+|....++++++++|.++...+.+-+.|-.|.+
T Consensus       211 ~~LLv~aG~vTavpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~  279 (293)
T COG2962         211 WLLLVLAGLVTAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALA  279 (293)
T ss_pred             HHHHHHhhHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHH
Confidence            344566788888999999999999999999999999999999999999999999999888877766543

>PF09930 DUF2162: Predicted transporter (DUF2162); InterPro: IPR017199 This group represents a predicted membrane transporter, MTH672 type

Probab=88.46  E-value=8.5  Score=32.94  Aligned_cols=75  Identities=15%  Similarity=0.096  Sum_probs=52.6

Q ss_pred             cccchHHHHHHHHHHHHHHHHHHHHhhhhcccchHhHHHHHhhhhhHHHHHH---HHHhhccCCChhHHHhhhheeee
Q 041251          135 VSMSWRDYYVRVVPTGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVF---AFAFRLESPSIKLLGIIIIISIG  209 (213)
Q Consensus       135 ~~~~~~~~~~~vlP~sl~~~~~i~~~n~sL~~vsVsf~q~iKs~tPifv~ll---~~l~~~e~~s~~~~lsl~lIv~G  209 (213)
                      .+.+.+.++--.+|+-+|+..-....-.....+++|..++-+-+.-+|.+..   +.++++.+.+....++-..+..|
T Consensus        94 ~~~s~~t~lal~~PCPvCl~Ai~~S~~l~a~~~~~s~~~ig~~~g~if~i~il~ss~i~r~~~~~~p~~LG~~Mi~~G  171 (224)
T PF09930_consen   94 KDSSRRTFLALSLPCPVCLTAIFFSIMLLAPSIGLSGWEIGLVLGLIFFILILLSSFIFRRLKKPYPIILGNFMIFLG  171 (224)
T ss_pred             CCCcccchhhhhcCchHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHH
Confidence            3445566788899999999999888888889999999998887766655443   55555555444444454444444

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=87.59  E-value=8.9  Score=33.71  Aligned_cols=66  Identities=20%  Similarity=0.074  Sum_probs=51.7

Q ss_pred             HHHHHHHHHHHHHhhhhcccchHhHHHHHhhhhhHHHHHHHHHhhccCCChh----HHHhhhheeeeeEe
Q 041251          147 VPTGLATALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIK----LLGIIIIISIGVLF  212 (213)
Q Consensus       147 lP~sl~~~~~i~~~n~sL~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~----~~lsl~lIv~Gv~l  212 (213)
                      +..+++++.+..+.-.|.+.+-+...-.+--+..+.--+.+.++++|+-+.+    +++++++++.|.++
T Consensus       199 il~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~il  268 (269)
T PF06800_consen  199 ILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAIL  268 (269)
T ss_pred             hHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence            5578888888888888888877777777777778888888889999886655    56677777777654

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=87.02  E-value=3.3  Score=36.31  Aligned_cols=57  Identities=16%  Similarity=0.041  Sum_probs=51.0

Q ss_pred             HHHHHHhhhhcccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeee
Q 041251          154 ALDVNLSNESLVFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGV  210 (213)
Q Consensus       154 ~~~i~~~n~sL~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv  210 (213)
                      ++-..+-..++..+|=+.+.++-|+.|.+-.+..+++.+|++|...++++..|+.+.
T Consensus       221 alPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAs  277 (292)
T COG5006         221 ALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAAS  277 (292)
T ss_pred             ccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH
Confidence            344567788999999999999999999999999999999999999999998887654

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=86.78  E-value=4.4  Score=37.39  Aligned_cols=126  Identities=15%  Similarity=0.104  Sum_probs=69.0

Q ss_pred             HHHHHHHHhhcCCCCCccchHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHH-HHHHHHHHHHHHHhhhhc
Q 041251           86 FLTLYNKTLLGDDMGKFPAPLLMNTVHFSMQAILSKAIIWFWSHRFQHTVSMSWRDYYVRV-VPTGLATALDVNLSNESL  164 (213)
Q Consensus        86 ~~~~~NK~ll~~~~~~Fp~P~~Lt~~q~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~v-lP~sl~~~~~i~~~n~sL  164 (213)
                      .++.+-|+-.++++.+-.-|++...+..+--.++.-.+..+...+. +.-+++-...+..+ +--.+...++=++=-+|.
T Consensus       261 vY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~-e~F~lP~~~q~~~vv~~~ligtvvSDylW~~a~  339 (416)
T KOG2765|consen  261 VYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGE-ERFELPSSTQFSLVVFNNLIGTVVSDYLWAKAV  339 (416)
T ss_pred             HHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhcc-CcccCCCCceeEeeeHhhHHHHHHHHHHHHHHH
Confidence            4455566666666557777788777665532222211111110111 11122211111111 111122222222333444


Q ss_pred             ccchHhHHHHHhhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251          165 VFISVTFATMCKSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF  212 (213)
Q Consensus       165 ~~vsVsf~q~iKs~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l  212 (213)
                      ...+.-..++.-+.+.+.-++.+.+++++.+|+.-+++-++|.+|.++
T Consensus       340 ~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~  387 (416)
T KOG2765|consen  340 LLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVI  387 (416)
T ss_pred             HhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhh
Confidence            445555566666778889999999999999999999999999888664

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	213
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	97.76
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	97.67

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=97.76  E-value=3e-05  Score=57.77  Aligned_cols=66  Identities=17%  Similarity=0.243  Sum_probs=59.5

Q ss_pred             HHHHHHHHHHHHHhhhhcccchHhHHHHH-hhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251          147 VPTGLATALDVNLSNESLVFISVTFATMC-KSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF  212 (213)
Q Consensus       147 lP~sl~~~~~i~~~n~sL~~vsVsf~q~i-Ks~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l  212 (213)
                      +-..+++.++..+-..+++++|++....+ ..+.|+++.++++++++|++++..++++.+|+.|+.+
T Consensus        34 ~~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~  100 (110)
T 3b5d_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLI  100 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHH
Confidence            34556778888888999999999999888 8999999999999999999999999999999999853

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=97.67  E-value=2e-05  Score=61.20  Aligned_cols=66  Identities=17%  Similarity=0.243  Sum_probs=48.7

Q ss_pred             HHHHHHHHHHHHHhhhhcccchHhHHHHH-hhhhhHHHHHHHHHhhccCCChhHHHhhhheeeeeEe
Q 041251          147 VPTGLATALDVNLSNESLVFISVTFATMC-KSASPIFLLVFAFAFRLESPSIKLLGIIIIISIGVLF  212 (213)
Q Consensus       147 lP~sl~~~~~i~~~n~sL~~vsVsf~q~i-Ks~tPifv~ll~~l~~~e~~s~~~~lsl~lIv~Gv~l  212 (213)
                      +-..+++++...+-+.+++++|++....+ ..+.|++++++++++++|++++..++++++|+.|+.+
T Consensus        34 ~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~l  100 (137)
T 2i68_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLI  100 (137)
T ss_dssp             CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHH
Confidence            34556788888999999999999988777 9999999999999999999999999999999999864

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00