Citrus Sinensis ID: 041398

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190------
MKKGWNRIIIEKPFGFDALCSHWLTKALLSKFQEKQLYRIDHLLGRNLIENLTVLRFSNLIFEPLWSRTYIRSIQVILSEEMGVQSGRYFDGYGIIRDIVHSHILQTIALLAMEPPISLNGEDIRNEKVKVLRSIRRLEPGNVILGQYKATSGDKVDVKLNSLTPTYFAAALYIDNASWDGVPFLIKAGIGLIRHG
cccccEEEEEEccccccHHHHHHHHHHHHHccccccEEcccccccHHHHHHHHHHHHHccccccccccccccEEEEEEEcccccccccccccccHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHccccccccEEEEccccccccccccccccccHHHHHHHHcEEccccccccEEEEccccccccc
cccccEEEEEcccccccHHHHHHHHHHHcccccHHHEEEcccccccccccHHHHHHHccHHHHcccccccEEEEEEEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHccccccHHHEEEEEEcccccccccccccccccEEEEEEEEEccccHccccEEEEccccccccc
MKKGWNRIIIEKPFGFDALCSHWLTKALLSKFQEKQLYRIDHLLGRNLIENLTVLrfsnlifeplwsrtYIRSIQVILSEemgvqsgryfdgyGIIRDIVHSHILQTIALLameppislngedirNEKVKVLRSIRrlepgnvilgqykatsgdkvdvklnsltPTYFAAALYIdnaswdgvPFLIKAgiglirhg
MKKGWNRIIIEKPFGFDALCSHWLTKALLSKFQEKQLYRIDHLLGRNLIENLTVLRFSNLIFEPLWSRTYIRSIQVILSEEMGVQSGRYFDGYGIIRDIVHSHILQTIALLAMEPPislngedirnEKVKVLrsirrlepgnvilgqykatsgdkvdvKLNSLTPTYFAAALYIDNASWDGVPFLIKAGIGLIRHG
MKKGWNRIIIEKPFGFDALCSHWLTKALLSKFQEKQLYRIDHLLGRNLIENLTVLRFSNLIFEPLWSRTYIRSIQVILSEEMGVQSGRYFDGYGIIRDIVHSHILQTIALLAMEPPISLNGEDIRNEKVKVLRSIRRLEPGNVILGQYKATSGDKVDVKLNSLTPTYFAAALYIDNASWDGVPFLIKAGIGLIRHG
****WNRIIIEKPFGFDALCSHWLTKALLSKFQEKQLYRIDHLLGRNLIENLTVLRFSNLIFEPLWSRTYIRSIQVILSEEMGVQSGRYFDGYGIIRDIVHSHILQTIALLAMEPPISLNGEDIRNEKVKVLRSIRRLEPGNVILGQYKATSGDKVDVKLNSLTPTYFAAALYIDNASWDGVPFLIKAGIGLI***
**KGWNRIIIEKPFGFDALCSHWLTKALLSKFQEKQLYRIDHLLGRNLIENLTVLRFSNLIFEPLWSRTYIRSIQVILSEEMGVQSGRYFDGYGIIRDIVHSHILQTIALLAMEPPISLNGEDIRNEKVKVLRSIRRLEPGNVILGQYKATSGDKVDVKLNSLTPTYFAAALYIDNASWDGVPFLIKA*IGL****
MKKGWNRIIIEKPFGFDALCSHWLTKALLSKFQEKQLYRIDHLLGRNLIENLTVLRFSNLIFEPLWSRTYIRSIQVILSEEMGVQSGRYFDGYGIIRDIVHSHILQTIALLAMEPPISLNGEDIRNEKVKVLRSIRRLEPGNVILGQYKATSGDKVDVKLNSLTPTYFAAALYIDNASWDGVPFLIKAGIGLIRHG
**KGWNRIIIEKPFGFDALCSHWLTKALLSKFQEKQLYRIDHLLGRNLIENLTVLRFSNLIFEPLWSRTYIRSIQVILSEEMGVQSGRYFDGYGIIRDIVHSHILQTIALLAMEPPISLNGEDIRNEKVKVLRSIRRLEPGNVILGQYKATSGDKVDVKLNSLTPTYFAAALYIDNASWDGVPFLIKAGI******
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oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MKKGWNRIIIEKPFGFDALCSHWLTKALLSKFQEKQLYRIDHLLGRNLIENLTVLRFSNLIFEPLWSRTYIRSIQVILSEEMGVQSGRYFDGYGIIRDIVHSHILQTIALLAMEPPISLNGEDIRNEKVKVLRSIRRLEPGNVILGQYKATSGDKVDVKLNSLTPTYFAAALYIDNASWDGVPFLIKAGIGLIRHG
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query196 2.2.26 [Sep-21-2011]
Q93ZW0 625 Glucose-6-phosphate 1-deh yes no 0.979 0.307 0.756 2e-83
Q8L743 599 Glucose-6-phosphate 1-deh no no 0.964 0.315 0.592 3e-63
Q9FY99 596 Glucose-6-phosphate 1-deh no no 0.964 0.317 0.597 3e-63
O24357 574 Glucose-6-phosphate 1-deh N/A no 0.964 0.329 0.577 4e-62
Q43793 593 Glucose-6-phosphate 1-deh N/A no 0.964 0.318 0.597 6e-62
Q43839 577 Glucose-6-phosphate 1-deh N/A no 0.964 0.327 0.587 6e-62
Q43727 576 Glucose-6-phosphate 1-deh no no 0.994 0.338 0.551 2e-60
Q557D2 497 Glucose-6-phosphate 1-deh yes no 0.974 0.384 0.482 2e-52
O55044 515 Glucose-6-phosphate 1-deh yes no 0.974 0.370 0.470 3e-49
P05370 515 Glucose-6-phosphate 1-deh yes no 0.974 0.370 0.470 5e-49
>sp|Q93ZW0|G6PD4_ARATH Glucose-6-phosphate 1-dehydrogenase 4, chloroplastic OS=Arabidopsis thaliana GN=At1g09420 PE=2 SV=1 Back     alignment and function desciption
 Score =  307 bits (787), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 146/193 (75%), Positives = 173/193 (89%), Gaps = 1/193 (0%)

Query: 3   KGWNRIIIEKPFGFDALCSHWLTKALLSKFQEKQLYRIDHLLGRNLIENLTVLRFSNLIF 62
           +GW RII+EKPFGF++  SH LTK+LLSKF+EKQ+YRIDH+LGRNLIENLTVLRFSNL+F
Sbjct: 288 RGWTRIIVEKPFGFNSHSSHQLTKSLLSKFEEKQIYRIDHMLGRNLIENLTVLRFSNLVF 347

Query: 63  EPLWSRTYIRSIQVILSEEMGVQSGRYFDGYGIIRDIVHSHILQTIALLAMEPPISLNGE 122
           EPLW+RTYIR+IQVI+SE +  Q+ ++ DGYGIIRDIVHSHILQTIALLAMEPPISL+GE
Sbjct: 348 EPLWNRTYIRNIQVIISESIA-QTEKFSDGYGIIRDIVHSHILQTIALLAMEPPISLDGE 406

Query: 123 DIRNEKVKVLRSIRRLEPGNVILGQYKATSGDKVDVKLNSLTPTYFAAALYIDNASWDGV 182
           DIRNEKVKVLRSIR+++P +VILGQYK++S DK  V LN + PTY AAALYIDNA WDGV
Sbjct: 407 DIRNEKVKVLRSIRKIDPRDVILGQYKSSSRDKNGVILNGVDPTYCAAALYIDNARWDGV 466

Query: 183 PFLIKAGIGLIRH 195
           PFL++ G GLI+H
Sbjct: 467 PFLVRVGTGLIKH 479
Catalyzes the rate-limiting step of the oxidative pentose-phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis. The main function of this enzyme is to provide reducing power (NADPH) and pentose phosphates for fatty acid and nucleic acid synthesis which are involved in membrane synthesis and cell division.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 4EC: 9
>sp|Q8L743|G6PD3_ARATH Glucose-6-phosphate 1-dehydrogenase 3, chloroplastic OS=Arabidopsis thaliana GN=At1g24280 PE=2 SV=2 Back     alignment and function description
>sp|Q9FY99|G6PD2_ARATH Glucose-6-phosphate 1-dehydrogenase 2, chloroplastic OS=Arabidopsis thaliana GN=At5g13110 PE=2 SV=2 Back     alignment and function description
>sp|O24357|G6PDC_SPIOL Glucose-6-phosphate 1-dehydrogenase, chloroplastic OS=Spinacia oleracea GN=G6PD PE=2 SV=1 Back     alignment and function description
>sp|Q43793|G6PDC_TOBAC Glucose-6-phosphate 1-dehydrogenase, chloroplastic OS=Nicotiana tabacum PE=2 SV=1 Back     alignment and function description
>sp|Q43839|G6PDC_SOLTU Glucose-6-phosphate 1-dehydrogenase, chloroplastic OS=Solanum tuberosum PE=1 SV=1 Back     alignment and function description
>sp|Q43727|G6PD1_ARATH Glucose-6-phosphate 1-dehydrogenase 1, chloroplastic OS=Arabidopsis thaliana GN=APG1 PE=2 SV=2 Back     alignment and function description
>sp|Q557D2|G6PD_DICDI Glucose-6-phosphate 1-dehydrogenase OS=Dictyostelium discoideum GN=g6pd-1 PE=3 SV=1 Back     alignment and function description
>sp|O55044|G6PD_CRIGR Glucose-6-phosphate 1-dehydrogenase OS=Cricetulus griseus GN=G6PD PE=2 SV=3 Back     alignment and function description
>sp|P05370|G6PD_RAT Glucose-6-phosphate 1-dehydrogenase OS=Rattus norvegicus GN=G6pdx PE=1 SV=3 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query196
380863008 369 glucose-6-phosphate dehydrogenase, parti 0.989 0.525 0.860 2e-94
359487571 632 PREDICTED: glucose-6-phosphate 1-dehydro 0.989 0.306 0.840 5e-93
224122856 474 predicted protein [Populus trichocarpa] 0.979 0.405 0.845 1e-91
356572902 604 PREDICTED: glucose-6-phosphate 1-dehydro 0.989 0.321 0.819 4e-90
255542988 595 glucose-6-phosphate 1-dehydrogenase, put 0.984 0.324 0.823 1e-89
357511753 601 Glucose-6-phosphate 1-dehydrogenase [Med 0.989 0.322 0.804 2e-88
449453992 638 PREDICTED: glucose-6-phosphate 1-dehydro 0.989 0.304 0.768 2e-87
356503998 612 PREDICTED: glucose-6-phosphate 1-dehydro 0.989 0.316 0.788 2e-86
18391021 625 glucose-6-phosphate dehydrogenase 4 [Ara 0.979 0.307 0.756 1e-81
297849248 608 glucose-6-phosphate dehydrogenase 4 [Ara 0.979 0.315 0.756 2e-81
>gi|380863008|gb|AFF18797.1| glucose-6-phosphate dehydrogenase, partial [Dimocarpus longan] Back     alignment and taxonomy information
 Score =  350 bits (897), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 167/194 (86%), Positives = 182/194 (93%)

Query: 2   KKGWNRIIIEKPFGFDALCSHWLTKALLSKFQEKQLYRIDHLLGRNLIENLTVLRFSNLI 61
           +KGWNRIIIEKPFGFDAL SH LTK+LLSKF E QLYRIDHLLG+NLIENLTVLRFSNLI
Sbjct: 30  RKGWNRIIIEKPFGFDALSSHKLTKSLLSKFDEHQLYRIDHLLGKNLIENLTVLRFSNLI 89

Query: 62  FEPLWSRTYIRSIQVILSEEMGVQSGRYFDGYGIIRDIVHSHILQTIALLAMEPPISLNG 121
           FEPLWSRTY+RS+Q+ILSE+  VQ GRYFDGYGIIRD+VHSHILQTIALLAME P+SL+G
Sbjct: 90  FEPLWSRTYVRSVQIILSEDFVVQKGRYFDGYGIIRDVVHSHILQTIALLAMEQPVSLDG 149

Query: 122 EDIRNEKVKVLRSIRRLEPGNVILGQYKATSGDKVDVKLNSLTPTYFAAALYIDNASWDG 181
           EDIRNEKVKVLRSI +L+P NVILGQYKATSGDK+DVKLNSLTPTYFAAAL+IDNA WDG
Sbjct: 150 EDIRNEKVKVLRSICKLDPSNVILGQYKATSGDKIDVKLNSLTPTYFAAALFIDNARWDG 209

Query: 182 VPFLIKAGIGLIRH 195
           VPFLIK GIGLI+H
Sbjct: 210 VPFLIKTGIGLIKH 223

Source: Dimocarpus longan

Species: Dimocarpus longan

Genus: Dimocarpus

Family: Sapindaceae

Order: Sapindales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|359487571|ref|XP_002276987.2| PREDICTED: glucose-6-phosphate 1-dehydrogenase 4, chloroplastic-like [Vitis vinifera] gi|296089824|emb|CBI39643.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224122856|ref|XP_002318933.1| predicted protein [Populus trichocarpa] gi|222857309|gb|EEE94856.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356572902|ref|XP_003554604.1| PREDICTED: glucose-6-phosphate 1-dehydrogenase 4, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|255542988|ref|XP_002512557.1| glucose-6-phosphate 1-dehydrogenase, putative [Ricinus communis] gi|223548518|gb|EEF50009.1| glucose-6-phosphate 1-dehydrogenase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|357511753|ref|XP_003626165.1| Glucose-6-phosphate 1-dehydrogenase [Medicago truncatula] gi|355501180|gb|AES82383.1| Glucose-6-phosphate 1-dehydrogenase [Medicago truncatula] Back     alignment and taxonomy information
>gi|449453992|ref|XP_004144740.1| PREDICTED: glucose-6-phosphate 1-dehydrogenase 4, chloroplastic-like [Cucumis sativus] gi|449490774|ref|XP_004158703.1| PREDICTED: glucose-6-phosphate 1-dehydrogenase 4, chloroplastic-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356503998|ref|XP_003520786.1| PREDICTED: glucose-6-phosphate 1-dehydrogenase 4, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|18391021|ref|NP_563844.1| glucose-6-phosphate dehydrogenase 4 [Arabidopsis thaliana] gi|25452977|sp|Q93ZW0.1|G6PD4_ARATH RecName: Full=Glucose-6-phosphate 1-dehydrogenase 4, chloroplastic; Short=G6PD4; Short=G6PDH4; Flags: Precursor gi|15810387|gb|AAL07081.1| putative glucose-6-phosphate dehydrogenase [Arabidopsis thaliana] gi|21436353|gb|AAM51346.1| putative glucose-6-phosphate dehydrogenase [Arabidopsis thaliana] gi|110738062|dbj|BAF00965.1| putative Glucose-6-phosphate dehydrogenase [Arabidopsis thaliana] gi|332190319|gb|AEE28440.1| glucose-6-phosphate dehydrogenase 4 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297849248|ref|XP_002892505.1| glucose-6-phosphate dehydrogenase 4 [Arabidopsis lyrata subsp. lyrata] gi|297338347|gb|EFH68764.1| glucose-6-phosphate dehydrogenase 4 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query196
TAIR|locus:2179887 596 G6PD2 "glucose-6-phosphate deh 0.964 0.317 0.597 2.2e-57
TAIR|locus:2032412 599 G6PD3 "glucose-6-phosphate deh 0.964 0.315 0.597 3.6e-57
TAIR|locus:2165154 576 G6PD1 "glucose-6-phosphate deh 0.994 0.338 0.560 4.8e-55
DICTYBASE|DDB_G0273639 497 g6pd-2 "glucose 6-phosphate-1- 0.974 0.384 0.482 8.5e-49
DICTYBASE|DDB_G0273131 497 g6pd-1 "glucose 6-phosphate-1- 0.974 0.384 0.482 8.5e-49
TAIR|locus:2086558 516 G6PD5 "glucose-6-phosphate deh 0.943 0.358 0.486 1e-45
RGD|2645 515 G6pd "glucose-6-phosphate dehy 0.964 0.366 0.475 1.6e-45
UNIPROTKB|F1MMK2 515 G6PD "Glucose-6-phosphate 1-de 0.964 0.366 0.47 2.7e-45
TAIR|locus:2154805 515 G6PD6 "glucose-6-phosphate deh 0.959 0.365 0.484 2.7e-45
UNIPROTKB|P11413 515 G6PD "Glucose-6-phosphate 1-de 0.964 0.366 0.47 4.4e-45
TAIR|locus:2179887 G6PD2 "glucose-6-phosphate dehydrogenase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 590 (212.7 bits), Expect = 2.2e-57, P = 2.2e-57
 Identities = 119/199 (59%), Positives = 148/199 (74%)

Query:     4 GWNRIIIEKPFGFDALCSHWLTKALLSKFQEKQLYRIDHLLGRNLIENLTVLRFSNLIFE 63
             GW R+I+EKPFG D+  S  LTK+L    +E Q++RIDH LG+ L+ENL+VLRFSNLIFE
Sbjct:   245 GWTRVIVEKPFGRDSETSAALTKSLKQYLEEDQIFRIDHYLGKELVENLSVLRFSNLIFE 304

Query:    64 PLWSRTYIRSIQVILSEEMGVQS-GRYFDGYGIIRDIVHSHILQTIALLAMEPPISLNGE 122
             PLWSR YIR++Q I SE+ G +  G YFD YGIIRDI+ +H+LQ +AL AME P+SL+ E
Sbjct:   305 PLWSRQYIRNVQFIFSEDFGTEGRGGYFDNYGIIRDIMQNHLLQILALFAMETPVSLDAE 364

Query:   123 DIRNEKVKVLRSIRRLEPGNVILGQYKA-TSG--------DKVDVKLNSLTPTYFAAALY 173
             DIRNEKVKVLRS+R +   +V++GQYK+ T G        D   V   SLTPT+ AAAL+
Sbjct:   365 DIRNEKVKVLRSMRPIRVEDVVIGQYKSHTKGGVTYPAYTDDKTVPKGSLTPTFAAAALF 424

Query:   174 IDNASWDGVPFLIKAGIGL 192
             IDNA WDGVPFL+KAG  L
Sbjct:   425 IDNARWDGVPFLMKAGKAL 443
GO:0000166 "nucleotide binding" evidence=IEA
GO:0004345 "glucose-6-phosphate dehydrogenase activity" evidence=IEA;ISS;IDA
GO:0006006 "glucose metabolic process" evidence=IEA;ISS;IDA
GO:0009507 "chloroplast" evidence=ISM;ISS
GO:0050661 "NADP binding" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0009051 "pentose-phosphate shunt, oxidative branch" evidence=IDA
GO:0009570 "chloroplast stroma" evidence=IDA
TAIR|locus:2032412 G6PD3 "glucose-6-phosphate dehydrogenase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2165154 G6PD1 "glucose-6-phosphate dehydrogenase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0273639 g6pd-2 "glucose 6-phosphate-1-dehydrogenase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0273131 g6pd-1 "glucose 6-phosphate-1-dehydrogenase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
TAIR|locus:2086558 G6PD5 "glucose-6-phosphate dehydrogenase 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
RGD|2645 G6pd "glucose-6-phosphate dehydrogenase" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1MMK2 G6PD "Glucose-6-phosphate 1-dehydrogenase" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
TAIR|locus:2154805 G6PD6 "glucose-6-phosphate dehydrogenase 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|P11413 G6PD "Glucose-6-phosphate 1-dehydrogenase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q93ZW0G6PD4_ARATH1, ., 1, ., 1, ., 4, 90.75640.97950.3072yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.1.1LOW CONFIDENCE prediction!
4th Layer1.1.1.49LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query196
PLN02333 604 PLN02333, PLN02333, glucose-6-phosphate 1-dehydrog 6e-85
PLN02640 573 PLN02640, PLN02640, glucose-6-phosphate 1-dehydrog 5e-81
PTZ00309 542 PTZ00309, PTZ00309, glucose-6-phosphate 1-dehydrog 5e-78
TIGR00871 482 TIGR00871, zwf, glucose-6-phosphate 1-dehydrogenas 1e-76
PRK05722 495 PRK05722, PRK05722, glucose-6-phosphate 1-dehydrog 1e-75
COG0364 483 COG0364, Zwf, Glucose-6-phosphate 1-dehydrogenase 7e-73
PLN02539 491 PLN02539, PLN02539, glucose-6-phosphate 1-dehydrog 1e-69
PRK12853 482 PRK12853, PRK12853, glucose-6-phosphate 1-dehydrog 5e-68
PRK12854 484 PRK12854, PRK12854, glucose-6-phosphate 1-dehydrog 6e-58
pfam02781 294 pfam02781, G6PD_C, Glucose-6-phosphate dehydrogena 4e-55
pfam00479183 pfam00479, G6PD_N, Glucose-6-phosphate dehydrogena 2e-16
>gnl|CDD|215191 PLN02333, PLN02333, glucose-6-phosphate 1-dehydrogenase Back     alignment and domain information 
 Score =  261 bits (669), Expect = 6e-85
 Identities = 119/199 (59%), Positives = 149/199 (74%), Gaps = 10/199 (5%)

Query: 4   GWNRIIIEKPFGFDALCSHWLTKALLSKFQEKQLYRIDHLLGRNLIENLTVLRFSNLIFE 63
           GW R+I+EKPFG D+  S  LTK+L    +E Q++RIDH LG+ L+ENL+VLRFSNLIFE
Sbjct: 253 GWTRVIVEKPFGRDSESSAALTKSLKQYLEEDQIFRIDHYLGKELVENLSVLRFSNLIFE 312

Query: 64  PLWSRTYIRSIQVILSEEMGVQS-GRYFDGYGIIRDIVHSHILQTIALLAMEPPISLNGE 122
           PLWSR YIR++Q I SE+ G +  G YFD YGIIRDI+ +H+LQ +AL AME P+SL+ E
Sbjct: 313 PLWSRQYIRNVQFIFSEDFGTEGRGGYFDNYGIIRDIMQNHLLQILALFAMETPVSLDAE 372

Query: 123 DIRNEKVKVLRSIRRLEPGNVILGQYKA-TSG--------DKVDVKLNSLTPTYFAAALY 173
           DIRNEKVKVLRS+R ++  +V++GQYK+ T G        D   V   SLTPT+ AAAL+
Sbjct: 373 DIRNEKVKVLRSMRPIQLEDVVIGQYKSHTKGGVTYPAYTDDKTVPKGSLTPTFAAAALF 432

Query: 174 IDNASWDGVPFLIKAGIGL 192
           IDNA WDGVPFL+KAG  L
Sbjct: 433 IDNARWDGVPFLMKAGKAL 451

Length = 604
>gnl|CDD|215344 PLN02640, PLN02640, glucose-6-phosphate 1-dehydrogenase Back     alignment and domain information
>gnl|CDD|240353 PTZ00309, PTZ00309, glucose-6-phosphate 1-dehydrogenase; Provisional Back     alignment and domain information
>gnl|CDD|233162 TIGR00871, zwf, glucose-6-phosphate 1-dehydrogenase Back     alignment and domain information
>gnl|CDD|235579 PRK05722, PRK05722, glucose-6-phosphate 1-dehydrogenase; Validated Back     alignment and domain information
>gnl|CDD|223441 COG0364, Zwf, Glucose-6-phosphate 1-dehydrogenase [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|178154 PLN02539, PLN02539, glucose-6-phosphate 1-dehydrogenase Back     alignment and domain information
>gnl|CDD|237233 PRK12853, PRK12853, glucose-6-phosphate 1-dehydrogenase; Provisional Back     alignment and domain information
>gnl|CDD|237234 PRK12854, PRK12854, glucose-6-phosphate 1-dehydrogenase; Provisional Back     alignment and domain information
>gnl|CDD|217228 pfam02781, G6PD_C, Glucose-6-phosphate dehydrogenase, C-terminal domain Back     alignment and domain information
>gnl|CDD|215937 pfam00479, G6PD_N, Glucose-6-phosphate dehydrogenase, NAD binding domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 196
PTZ00309 542 glucose-6-phosphate 1-dehydrogenase; Provisional 100.0
PLN02333 604 glucose-6-phosphate 1-dehydrogenase 100.0
PLN02539 491 glucose-6-phosphate 1-dehydrogenase 100.0
PLN02640 573 glucose-6-phosphate 1-dehydrogenase 100.0
PRK05722 495 glucose-6-phosphate 1-dehydrogenase; Validated 100.0
PRK12854 484 glucose-6-phosphate 1-dehydrogenase; Provisional 100.0
TIGR00871 482 zwf glucose-6-phosphate 1-dehydrogenase. This is a 100.0
PRK12853 482 glucose-6-phosphate 1-dehydrogenase; Provisional 100.0
COG0364 483 Zwf Glucose-6-phosphate 1-dehydrogenase [Carbohydr 100.0
KOG0563 499 consensus Glucose-6-phosphate 1-dehydrogenase [Car 100.0
PF02781 293 G6PD_C: Glucose-6-phosphate dehydrogenase, C-termi 100.0
PF14251119 DUF4346: Domain of unknown function (DUF4346) 92.45
>PTZ00309 glucose-6-phosphate 1-dehydrogenase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=6e-100  Score=718.65  Aligned_cols=194  Identities=50%  Similarity=0.882  Sum_probs=190.5

Q ss_pred             CCceEEEeccCCCCChHHHHHHHHHHhccCCCcccccccccccHHHHHHHHHHHhhccccccccCcCCcCceEEEeecCC
Q 041398            3 KGWNRIIIEKPFGFDALCSHWLTKALLSKFQEKQLYRIDHLLGRNLIENLTVLRFSNLIFEPLWSRTYIRSIQVILSEEM   82 (196)
Q Consensus         3 ~~~~RiviEKPFG~dl~Sa~~L~~~l~~~f~e~~i~RIDHYLGKe~Vqnil~lRf~N~~~~~~Wn~~~I~~VqI~~~E~~   82 (196)
                      +||+|||||||||+||+||++||++|+++|+|+||||||||||||||||||+|||+|++|+|+|||+||+|||||++|++
T Consensus       192 ~G~~RiViEKPFG~Dl~SA~~Ln~~l~~~f~E~qIyRIDHYLGKE~VQNil~lRFaN~ifeplWNr~~I~~VqIt~~E~~  271 (542)
T PTZ00309        192 NGWVRVIVEKPFGRDLESSEELSNQLEPLFDESQLYRIDHYLGKEMVQNLIVLRFANRVFEPLWNRNNIACVQITFKEDI  271 (542)
T ss_pred             CCCeEEEEECCCCCCHHHHHHHHHHHHhhCCHhHccccCccccHHHHHHHHHHHHhhHhhhhhhcccccceeEEEEecCC
Confidence            37999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             Ccc-ccccccccchhHHHHHHHHHHHHHHHhcCCCCCCChHHHHHHHHHHhhccccCCCCccccccCCC-------CCCC
Q 041398           83 GVQ-SGRYFDGYGIIRDIVHSHILQTIALLAMEPPISLNGEDIRNEKVKVLRSIRRLEPGNVILGQYKA-------TSGD  154 (196)
Q Consensus        83 gv~-R~~yyd~~G~iRDmvQNHLlQlL~lvaMe~P~s~~~~~ir~eKvkvL~~i~~~~~~~~v~GQY~~-------~~~~  154 (196)
                      ||| ||+|||++|||||||||||||||||+|||||.++++++||+||+|||||++|++++++|+|||.+       +|++
T Consensus       272 GvegRg~yYD~~GalRDmvQNHLlQlLalvAMEpP~~~~a~~irdeKvkVLrslrpi~~~~~VrGQY~~~~~~~v~gY~~  351 (542)
T PTZ00309        272 GTEGRGGYFDSYGIIRDVMQNHLLQILALLAMEKPVSLSAEDIRDEKVKVLKCIEPIKMEECVLGQYTASADGSIPGYLE  351 (542)
T ss_pred             CcChhhhhhhccchHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhCcCCCCccceEEecccCCCCCCCCCccc
Confidence            999 99999999999999999999999999999999999999999999999999999999999999975       5899


Q ss_pred             CCCCCCCCcccceeeeeeeeeCCCcCCCceEEEcCCCCCCCC
Q 041398          155 KVDVKLNSLTPTYFAAALYIDNASWDGVPFLIKAGIGLIRHG  196 (196)
Q Consensus       155 e~~v~~~S~TeTfaa~~l~Idn~rW~gVPF~lrtGK~L~~~~  196 (196)
                      |+||+|+|.||||||++|+||||||+||||||||||+|++|.
T Consensus       352 e~gV~~dS~TeTFaA~kl~IdN~RW~GVPFylRtGK~L~~r~  393 (542)
T PTZ00309        352 DEGVPKDSTTPTFAAAVLHINNDRWEGVPFILEAGKALEERY  393 (542)
T ss_pred             CCCCCCCCCccceeEEEEEecCcccCCceEEEEeccCcCCCe
Confidence            999999999999999999999999999999999999999873

>PLN02333 glucose-6-phosphate 1-dehydrogenase Back     alignment and domain information
>PLN02539 glucose-6-phosphate 1-dehydrogenase Back     alignment and domain information
>PLN02640 glucose-6-phosphate 1-dehydrogenase Back     alignment and domain information
>PRK05722 glucose-6-phosphate 1-dehydrogenase; Validated Back     alignment and domain information
>PRK12854 glucose-6-phosphate 1-dehydrogenase; Provisional Back     alignment and domain information
>TIGR00871 zwf glucose-6-phosphate 1-dehydrogenase Back     alignment and domain information
>PRK12853 glucose-6-phosphate 1-dehydrogenase; Provisional Back     alignment and domain information
>COG0364 Zwf Glucose-6-phosphate 1-dehydrogenase [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG0563 consensus Glucose-6-phosphate 1-dehydrogenase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF02781 G6PD_C: Glucose-6-phosphate dehydrogenase, C-terminal domain; InterPro: IPR022675 Glucose-6-phosphate dehydrogenase (1 Back     alignment and domain information
>PF14251 DUF4346: Domain of unknown function (DUF4346) Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query196
1qki_A 514 X-Ray Structure Of Human Glucose 6-Phosphate Dehydr 2e-49
2bh9_A 489 X-Ray Structure Of A Deletion Variant Of Human Gluc 3e-49
4e9i_A 541 Glucose-6-P Dehydrogenase (Apo Form) From Trypanoso 1e-44
1dpg_A 485 Glucose 6-Phosphate Dehydrogenase From Leuconostoc 7e-34
1e77_A 485 Complex Of Active Mutant (Q365->c) Of Glucose 6-Pho 7e-34
1h93_A 485 Active Mutant (S215->c) Of Glucose 6-Phosphate Dehy 2e-33
1e7m_A 485 Active Site Mutant (D177->n) Of Glucose 6-Phosphate 2e-33
2dpg_A 485 Complex Of Inactive Mutant (H240->n) Of Glucose 6-P 4e-33
>pdb|1QKI|A Chain A, X-Ray Structure Of Human Glucose 6-Phosphate Dehydrogenase (Variant Canton R459l) Complexed With Structural Nadp+ Length = 514 Back     alignment and structure 
Iteration: 1

 Score =  191 bits (485), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 94/200 (47%), Positives = 130/200 (65%), Gaps = 11/200 (5%)
Query: 4   GWNRIIIEKPFGFDALCSHWLTKALLSKFQEKQLYRIDHLLGRNLIENLTVLRFSNLIFE 63
           GWNRII+EKPFG D   S  L+  + S F+E Q+YRIDH LG+ +++NL VLRF+N IF 
Sbjct: 162 GWNRIIVEKPFGRDLQSSDRLSNHISSLFREDQIYRIDHYLGKEMVQNLMVLRFANRIFG 221
Query: 64  PLWSRTYIRSIQVILSEEMGVQS-GRYFDGYGIIRDIVHSHILQTIALLAMEPPISLNGE 122
           P+W+R  I  + +   E  G +  G YFD +GIIRD++ +H+LQ + L+AME P S N +
Sbjct: 222 PIWNRDNIACVILTFKEPFGTEGRGGYFDEFGIIRDVMQNHLLQMLCLVAMEKPASTNSD 281
Query: 123 DIRNEKVKVLRSIRRLEPGNVILGQY--------KATSG--DKVDVKLNSLTPTYFAAAL 172
           D+R+EKVKVL+ I  ++  NV+LGQY        +AT G  D   V   S T T+ A  L
Sbjct: 282 DVRDEKVKVLKCISEVQANNVVLGQYVGNPDGEGEATKGYLDDPTVPRGSTTATFAAVVL 341
Query: 173 YIDNASWDGVPFLIKAGIGL 192
           Y++N  WDGVPF+++ G  L
Sbjct: 342 YVENERWDGVPFILRCGKAL 361
>pdb|2BH9|A Chain A, X-Ray Structure Of A Deletion Variant Of Human Glucose 6- Phosphate Dehydrogenase Complexed With Structural And Coenzyme Nadp Length = 489 Back     alignment and structure
>pdb|4E9I|A Chain A, Glucose-6-P Dehydrogenase (Apo Form) From Trypanosoma Cruzi Length = 541 Back     alignment and structure
>pdb|1DPG|A Chain A, Glucose 6-Phosphate Dehydrogenase From Leuconostoc Mesenteroides Length = 485 Back     alignment and structure
>pdb|1E77|A Chain A, Complex Of Active Mutant (Q365->c) Of Glucose 6-Phosphate Dehydrogenase From Leuconostoc Mesenteroides With Substrate Length = 485 Back     alignment and structure
>pdb|1H93|A Chain A, Active Mutant (S215->c) Of Glucose 6-Phosphate Dehydrogenase From Leuconostoc Mesenteroides Length = 485 Back     alignment and structure
>pdb|1E7M|A Chain A, Active Site Mutant (D177->n) Of Glucose 6-Phosphate Dehydrogenase From Leuconostoc Mesenteroides Length = 485 Back     alignment and structure
>pdb|2DPG|A Chain A, Complex Of Inactive Mutant (H240->n) Of Glucose 6-Phosphate Dehydrogenase From Leuconostoc Mesenteroides With Nadp+ Length = 485 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query196
4e9i_A 541 Glucose-6-phosphate 1-dehydrogenase; pentose phosp 2e-93
2bh9_A 489 G6PD, glucose-6-phosphate 1-dehydrogenase; oxidore 2e-92
1dpg_A 485 G6PD, glucose 6-phosphate dehydrogenase; oxidoredu 2e-86
>4e9i_A Glucose-6-phosphate 1-dehydrogenase; pentose phosphate pathway, alpha beta, NAD(P) rossmann-like domain, oxidoreductase; 2.85A {Trypanosoma cruzi} PDB: 4em5_A* Length = 541 Back     alignment and structure
 Score =  281 bits (721), Expect = 2e-93
 Identities = 82/196 (41%), Positives = 120/196 (61%), Gaps = 8/196 (4%)

Query: 2   KKGWNRIIIEKPFGFDALCSHWLTKALLSKFQEKQLYRIDHLLGRNLIENLTVLRFSNLI 61
           + GW R+I+EKPFG D   S  L+  L   F E+Q++RIDH LG+ +++N+ V RF+N +
Sbjct: 193 ELGWVRLIVEKPFGRDTETSEQLSNQLKPLFNERQVFRIDHYLGKEMVQNIIVTRFANRV 252

Query: 62  FEPLWSRTYIRSIQVILSEEMGVQS-GRYFDGYGIIRDIVHSHILQTIALLAMEPPISLN 120
           F  LW+   I  +Q+   E++G    G YFD  GIIRD++ +H+ Q ++LL ME P SL+
Sbjct: 253 FSALWNSNSIACVQITFKEKIGTAGRGGYFDSIGIIRDVIQNHLTQILSLLTMEKPRSLS 312

Query: 121 GEDIRNEKVKVLRSIRRLEPGNVILGQYKATSGDKV-------DVKLNSLTPTYFAAALY 173
            EDIR+EKV+VLR +    P   +LGQY A++            V   S  PT+    L+
Sbjct: 313 AEDIRDEKVQVLRQVVPANPAECVLGQYTASADGSTPGYLDDPSVPKGSHCPTFAVLRLH 372

Query: 174 IDNASWDGVPFLIKAG 189
           ++N  W GVPF+I+AG
Sbjct: 373 VNNDRWHGVPFIIRAG 388
>2bh9_A G6PD, glucose-6-phosphate 1-dehydrogenase; oxidoreductase, oxidoreductase (CHOH(D)-NADP), carbohydrate metabolism, glucose metabolism; HET: NAP; 2.5A {Homo sapiens} PDB: 2bhl_A* 1qki_A* Length = 489 Back     alignment and structure
>1dpg_A G6PD, glucose 6-phosphate dehydrogenase; oxidoreductase, NADP/NAD, glucose metabolism, oxidoreductase (CHOH(D) - NAD(P)); 2.00A {Leuconostoc mesenteroides} SCOP: c.2.1.3 d.81.1.5 PDB: 1e7y_A* 1e7m_A* 1h93_A 1h94_A* 1h9a_A* 1e77_A* 1h9b_A 2dpg_A* Length = 485 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query196
2bh9_A 489 G6PD, glucose-6-phosphate 1-dehydrogenase; oxidore 100.0
1dpg_A 485 G6PD, glucose 6-phosphate dehydrogenase; oxidoredu 100.0
4e9i_A 541 Glucose-6-phosphate 1-dehydrogenase; pentose phosp 100.0
4h3v_A390 Oxidoreductase domain protein; structural genomics 91.28
3ip3_A337 Oxidoreductase, putative; structural genomics, PSI 85.76
3u3x_A361 Oxidoreductase; structural genomics, PSI-biology, 83.67
3e9m_A330 Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, 83.41
3cea_A346 MYO-inositol 2-dehydrogenase; NP_786804.1, oxidore 80.76
4hkt_A331 Inositol 2-dehydrogenase; structural genomics, nys 80.32
>2bh9_A G6PD, glucose-6-phosphate 1-dehydrogenase; oxidoreductase, oxidoreductase (CHOH(D)-NADP), carbohydrate metabolism, glucose metabolism; HET: NAP; 2.5A {Homo sapiens} PDB: 2bhl_A* 1qki_A* Back     alignment and structure
Probab=100.00  E-value=4.6e-103  Score=731.22  Aligned_cols=193  Identities=47%  Similarity=0.868  Sum_probs=189.7

Q ss_pred             CCceEEEeccCCCCChHHHHHHHHHHhccCCCcccccccccccHHHHHHHHHHHhhccccccccCcCCcCceEEEeecCC
Q 041398            3 KGWNRIIIEKPFGFDALCSHWLTKALLSKFQEKQLYRIDHLLGRNLIENLTVLRFSNLIFEPLWSRTYIRSIQVILSEEM   82 (196)
Q Consensus         3 ~~~~RiviEKPFG~dl~Sa~~L~~~l~~~f~e~~i~RIDHYLGKe~Vqnil~lRf~N~~~~~~Wn~~~I~~VqI~~~E~~   82 (196)
                      .||+|||||||||+||+||++||+.|+++|+|+||||||||||||||||||+|||+|.+|+|+|||+||+|||||++|++
T Consensus       136 ~g~~RvViEKPFG~DL~SA~~Ln~~l~~~F~E~qIyRIDHYLGKE~VQNll~lRFaN~ifeplWNr~~Id~VqIt~aE~~  215 (489)
T 2bh9_A          136 IGWNRIIVEKPFGRDLQSSDRLSNHISSLFREDQIYRIDHYLGKEMVQNLMVLRFANRIFGPIWNRDNIACVILTFKEPF  215 (489)
T ss_dssp             SSCEEEEECSCSCSSHHHHHHHHHHHTTTSCGGGEEECCGGGGCHHHHHHHHHHHSCGGGSTTCSTTTEEEEEEEEECSC
T ss_pred             CCceEEEEeCCCCCchhhHHHHHHHHHhhCCHHHeeecccccchHHHHHHHHHHHhhHHHHhhhcccccceEEEEEecCC
Confidence            47999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             Ccc-ccccccccchhHHHHHHHHHHHHHHHhcCCCCCCChHHHHHHHHHHhhccccCCCCccccccCCC----------C
Q 041398           83 GVQ-SGRYFDGYGIIRDIVHSHILQTIALLAMEPPISLNGEDIRNEKVKVLRSIRRLEPGNVILGQYKA----------T  151 (196)
Q Consensus        83 gv~-R~~yyd~~G~iRDmvQNHLlQlL~lvaMe~P~s~~~~~ir~eKvkvL~~i~~~~~~~~v~GQY~~----------~  151 (196)
                      ||| ||+|||++|||||||||||||||||||||||.++++++||+||+|||||++|++++++|+|||.+          +
T Consensus       216 GvegRggYYD~~GalRDmvQNHLlQlL~lvAMEpP~s~~a~~iRdEKvKVLralrp~~~~~~VrGQY~~g~~~~g~~v~g  295 (489)
T 2bh9_A          216 GTEGRGGYFDEFGIIRDVMQNHLLQMLCLVAMEKPASTNSDDVRDEKVKVLKCISEVQANNVVLGQYVGNPDGEGEATKG  295 (489)
T ss_dssp             CCTTCHHHHTTTHHHHHTTTTHHHHHHHHHHCCCCSSSSHHHHHHHHHHHHTTBCCCCGGGEEEEEEECCTTSCSTTSSC
T ss_pred             CccchhhhhhccchHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHhccCCCCccCeEEecccCCcCCCCCCCCC
Confidence            999 99999999999999999999999999999999999999999999999999999999999999973          5


Q ss_pred             CCCCCCCCCCCcccceeeeeeeeeCCCcCCCceEEEcCCCCCCC
Q 041398          152 SGDKVDVKLNSLTPTYFAAALYIDNASWDGVPFLIKAGIGLIRH  195 (196)
Q Consensus       152 ~~~e~~v~~~S~TeTfaa~~l~Idn~rW~gVPF~lrtGK~L~~~  195 (196)
                      |++|+||+++|+||||||++++||||||+||||||||||+|++|
T Consensus       296 Y~~E~~V~~~S~TeTfaA~kl~IdN~RW~GVPFylRtGKrL~~r  339 (489)
T 2bh9_A          296 YLDDPTVPRGSTTATFAAVVLYVENERWDGVPFILRCGKALNER  339 (489)
T ss_dssp             GGGCTTSCTTCCCCSEEEEEEEBCSTTTTTCEEEEEEESSCSSC
T ss_pred             cccCCCCCCCCCCcceEEEEEEEcCcCcCCCCEEEEcCCCCCcc
Confidence            88999999999999999999999999999999999999999987
>1dpg_A G6PD, glucose 6-phosphate dehydrogenase; oxidoreductase, NADP/NAD, glucose metabolism, oxidoreductase (CHOH(D) - NAD(P)); 2.00A {Leuconostoc mesenteroides} SCOP: c.2.1.3 d.81.1.5 PDB: 1e7y_A* 1e7m_A* 1h93_A 1h94_A* 1h9a_A* 1e77_A* 1h9b_A 2dpg_A* Back     alignment and structure
>4e9i_A Glucose-6-phosphate 1-dehydrogenase; pentose phosphate pathway, alpha beta, NAD(P) rossmann-like domain, oxidoreductase; 2.85A {Trypanosoma cruzi} PDB: 4em5_A* Back     alignment and structure
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida} Back     alignment and structure
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima} Back     alignment and structure
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti} Back     alignment and structure
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis} Back     alignment and structure
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1} Back     alignment and structure
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 196
d1qkia2 297 d.81.1.5 (A:200-434,A:450-511) Glucose 6-phosphate 7e-55
d1h9aa2 290 d.81.1.5 (A:182-412,A:427-485) Glucose 6-phosphate 6e-51
d1h9aa1195 c.2.1.3 (A:1-181,A:413-426) Glucose 6-phosphate de 2e-14
d1qkia1203 c.2.1.3 (A:12-199,A:435-449) Glucose 6-phosphate d 7e-10
>d1qkia2 d.81.1.5 (A:200-434,A:450-511) Glucose 6-phosphate dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 297 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: FwdE/GAPDH domain-like
superfamily: Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
family: Glucose 6-phosphate dehydrogenase-like
domain: Glucose 6-phosphate dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  174 bits (441), Expect = 7e-55
 Identities = 70/166 (42%), Positives = 100/166 (60%), Gaps = 11/166 (6%)

Query: 41  DHLLGRNLIENLTVLRFSNLIFEPLWSRTYIRSIQVILSEEMGVQS-GRYFDGYGIIRDI 99
           DH LG+ +++NL VLRF+N IF P+W+R  I  + +   E  G +  G YFD +GIIRD+
Sbjct: 1   DHYLGKEMVQNLMVLRFANRIFGPIWNRDNIACVILTFKEPFGTEGRGGYFDEFGIIRDV 60

Query: 100 VHSHILQTIALLAMEPPISLNGEDIRNEKVKVLRSIRRLEPGNVILGQYKATSG------ 153
           + +H+LQ + L+AME P S N +D+R+EKVKVL+ I  ++  NV+LGQY           
Sbjct: 61  MQNHLLQMLCLVAMEKPASTNSDDVRDEKVKVLKCISEVQANNVVLGQYVGNPDGEGEAT 120

Query: 154 ----DKVDVKLNSLTPTYFAAALYIDNASWDGVPFLIKAGIGLIRH 195
               D   V   S T T+ A  LY++N  WDGVPF+++ G  L   
Sbjct: 121 KGYLDDPTVPRGSTTATFAAVVLYVENERWDGVPFILRCGKALNER 166
>d1h9aa2 d.81.1.5 (A:182-412,A:427-485) Glucose 6-phosphate dehydrogenase {Leuconostoc mesenteroides [TaxId: 1245]} Length = 290 Back     information, alignment and structure
>d1h9aa1 c.2.1.3 (A:1-181,A:413-426) Glucose 6-phosphate dehydrogenase, N-terminal domain {Leuconostoc mesenteroides [TaxId: 1245]} Length = 195 Back     information, alignment and structure
>d1qkia1 c.2.1.3 (A:12-199,A:435-449) Glucose 6-phosphate dehydrogenase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 203 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query196
d1qkia2 297 Glucose 6-phosphate dehydrogenase {Human (Homo sap 100.0
d1h9aa2 290 Glucose 6-phosphate dehydrogenase {Leuconostoc mes 100.0
d1xeaa1167 Putative oxidoreductase VCA1048 {Vibrio cholerae [ 90.03
d1lc0a1172 Biliverdin reductase {Rat (Rattus norvegicus) [Tax 84.46
d1tlta1164 Virulence factor MviM {Escherichia coli [TaxId: 56 83.98
d1ydwa1184 Probable oxidoreductase At4g09670 {Thale cress (Ar 83.77
d2nvwa1237 Galactose/lactose metabolism regulatory protein GA 83.55
d1zh8a1181 Hypothetical protein TM0312 {Thermotoga maritima [ 82.57
>d1qkia2 d.81.1.5 (A:200-434,A:450-511) Glucose 6-phosphate dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: FwdE/GAPDH domain-like
superfamily: Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
family: Glucose 6-phosphate dehydrogenase-like
domain: Glucose 6-phosphate dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-82  Score=560.13  Aligned_cols=155  Identities=45%  Similarity=0.851  Sum_probs=152.2

Q ss_pred             cccccHHHHHHHHHHHhhccccccccCcCCcCceEEEeecCCCcc-ccccccccchhHHHHHHHHHHHHHHHhcCCCCCC
Q 041398           41 DHLLGRNLIENLTVLRFSNLIFEPLWSRTYIRSIQVILSEEMGVQ-SGRYFDGYGIIRDIVHSHILQTIALLAMEPPISL  119 (196)
Q Consensus        41 DHYLGKe~Vqnil~lRf~N~~~~~~Wn~~~I~~VqI~~~E~~gv~-R~~yyd~~G~iRDmvQNHLlQlL~lvaMe~P~s~  119 (196)
                      |||||||+||||++|||+|++|+|+|||+||++||||++|++||| ||+|||++|||||||||||||||||+|||||.++
T Consensus         1 DHYLGKe~Vqnil~lRfaN~~fe~lWN~~~I~~VqIt~~E~~gve~R~~yYd~~GalRDmvQNHllQll~lvaME~P~~~   80 (297)
T d1qkia2           1 DHYLGKEMVQNLMVLRFANRIFGPIWNRDNIACVILTFKEPFGTEGRGGYFDEFGIIRDVMQNHLLQMLCLVAMEKPAST   80 (297)
T ss_dssp             CGGGGSHHHHHHHHHHHSCSTTTTTSSTTTEEEEEEEEECSSCCCSCHHHHTTTHHHHHTTTTHHHHHHHHHHCCCCSSS
T ss_pred             CCcccHHHHHHHHHHHHhhhhhhhhhccccceEEEEEEecCcCcCchhhhhhccchHHHHHHHHHHHHHHHHHhCCcccC
Confidence            999999999999999999999999999999999999999999999 9999999999999999999999999999999999


Q ss_pred             ChHHHHHHHHHHhhccccCCCCccccccCCC----------CCCCCCCCCCCCcccceeeeeeeeeCCCcCCCceEEEcC
Q 041398          120 NGEDIRNEKVKVLRSIRRLEPGNVILGQYKA----------TSGDKVDVKLNSLTPTYFAAALYIDNASWDGVPFLIKAG  189 (196)
Q Consensus       120 ~~~~ir~eKvkvL~~i~~~~~~~~v~GQY~~----------~~~~e~~v~~~S~TeTfaa~~l~Idn~rW~gVPF~lrtG  189 (196)
                      ++++||+||+|||+|++|++++++++|||.+          +|++|+||+++|+||||||++|+||||||+|||||||||
T Consensus        81 ~~~~ir~eK~kvL~alr~~~~~~v~~gqy~~~~~~~g~~~~gY~~e~gV~~~S~TeTfaa~kl~Idn~RW~GVPFylRTG  160 (297)
T d1qkia2          81 NSDDVRDEKVKVLKCISEVQANNVVLGQYVGNPDGEGEATKGYLDDPTVPRGSTTATFAAVVLYVENERWDGVPFILRCG  160 (297)
T ss_dssp             CHHHHHHHHHHHHTTBCCCCGGGEEEEEEECCTTSCGGGGCCSTTCTTSCTTCCCCSEEEEEEEBCSTTTTTCEEEEEEE
T ss_pred             CHHHHHHHHHHHHhhcCcCChhhhhhceeeccccccCccccchhcccCCCcCCCccceEEEEEEEeCcccCCcEEEEeec
Confidence            9999999999999999999999999999954          578999999999999999999999999999999999999


Q ss_pred             CCCCCC
Q 041398          190 IGLIRH  195 (196)
Q Consensus       190 K~L~~~  195 (196)
                      |+|++|
T Consensus       161 KrL~~k  166 (297)
T d1qkia2         161 KALNER  166 (297)
T ss_dssp             SSCSCC
T ss_pred             ccccCc
Confidence            999987
>d1h9aa2 d.81.1.5 (A:182-412,A:427-485) Glucose 6-phosphate dehydrogenase {Leuconostoc mesenteroides [TaxId: 1245]} Back     information, alignment and structure
>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]} Back     information, alignment and structure
>d1lc0a1 c.2.1.3 (A:2-128,A:247-291) Biliverdin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d2nvwa1 c.2.1.3 (A:2-154,A:374-457) Galactose/lactose metabolism regulatory protein GAL80 {Yeast (Kluyveromyces lactis) [TaxId: 28985]} Back     information, alignment and structure
>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure