Citrus Sinensis ID: 041440

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------
Protein Sequence
SVSRPVGSLDLTPEEDYDSNTYVVQVPKDQIYRVPPPENARIVEKYRNPMNKRRNSCCTRVCWIILVLFVIGISIGITLVILHKVYSPKGAILFIADVHVKNQSRPRYEFTMKVKNPNENVAISYENDGDAFLLLKKKKLASGKFPQLEQEGGDSRNVRITLTGSNTVVPDEVSKSMHDKKTERAVSLQLEMNLKGEMNIGFLNLWSKDMHVVCDFKVSTLRTGTKVLSQKCDTQIK
Secondary Structure (PSIPRED)
ccccccccccccccccccccccEEEcccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHEEEEEcccccEEEEEEEEEEcccccEEEEEEEEEcccccEEEEEccccEEEEEEccEEEEEEcccccEEccccEEEEEEEEEEccccccHHHHHHHHHcccccEEEEEEEEEEEEEEEEEEEEEccEEEEEEEEEEEcccccccEEEEcccEEEEc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccccEEEEEccccEEEccccccccccHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEEEccccccEEEEEEEEEccccEEEEEEcccEEEEEEEccEEEcccccccccccccccEEEEEEEEcccccccHHHHHHHHHHHHcccEEEEEEEEEEEEEEEEEEEEcEEEEEEEEEEEEccccccccEEEcccEEEEc
Coil and Loop (DISEMBL)
svsrpvgsldltpeedydsntyvvqvpkdqiyrvpppenarIVEKYRnpmnkrrnscctrVCWIILVLFVIGISIGITLVILHKVYSPKGAILFIADVHvknqsrpryeftmkvknpnenvaiSYENDGDAFLLLKKKklasgkfpqleqeggdsrnvritltgsntvvpdevsksmhdkKTERAVSLQLEMNLKGEMNIGFLNLWSKDMHVVCDFKVSTLRTGTKVLSQKCDTQIK
Flexible Loop (DISEMBL)
svsrpvgsldltpeedydsntyvvqvpkdqiyrvpppenarivekyrnpmnkrrnsCCTRVCWIILVLFVIGISIGITLVILHKVYSPKGAILFIADVHVKNQSRPRYEFTMKVKNPNENVAISYENDGDAFLLLKKKKLASgkfpqleqeggdsrnvritltgsntvvpdevsksmhdkktERAVSLQLEMNLKGEMNIGFLNLWSKDMHVVCDFKVStlrtgtkvlsqkcdtqik
Low Complexity Region (SEG)
SVSRPVGSLDLTPEEDYDSNTYVVQVPKDQIYRVPPPENARIVEKYRNPMNKRRNSCCTRVCWIILVLFVIGISIGITLVILHKVYSPKGAILFIADVHVKNQSRPRYEFTMKVKNPNENVAISYENDGDAFlllkkkklASGKFPQLEQEGGDSRNVRITLTGSNTVVPDEVSKSMHDKKTERAVSLQLEMNLKGEMNIGFLNLWSKDMHVVCDFKVSTLRTGTKVLSQKCDTQIK
Disordered region (IsUnstruct)
********************TYVVQVPKDQIYRV******RIVEKYR**MNKRRNSCCTRVCWIILVLFVIGISIGITLVILHKVYSPKGAILFIADVHVKNQSRPRYEFTMKVKNPNENVAISYENDGDAFLLLKK***************************************************QLEMNLKGEMNIGFLNLWSKDMHVVCDFKVSTLRTGTKVL*********
Disordered Region (DISOPRED)
*****************************************************RNSCCTRVCWIILVLFVIGISIGITLVILHKVYSPKGAILFIADVHVKNQSRPRYEFTMKVKNPNENVAISYENDGDAFLLLKKKKLASGKFPQLEQEGGDSRNVRITLTGSNTVVPDEVSKSMHDKKTERAVSLQLEMNLKGEMNIGFLNLWSKDMHVVCDFKVST**********KCDT*IK
Disordered Region (DISEMBL)
SVSRPVGSLDLTPEEDYDSNTYVVQVPKDQIYRVPPPENARIVEKYRNPMNKRRNSCCTRVCWIILVLFVIGISIGITLVILHKVYSPKGAILFIADVHVKNQSRPRYEFTMKVKNPNENVAISYENDGDAFLLLKKKKLASGKFPQLEQEGGDSRNVRITLTGSNTVVPD************RAVSLQLEMNLKGEMNIGFLNLWSKDMHVVCDFKVSTLRTGTKVLSQKCDTQIK
Disordered Region (DISPRO)
******************SNTYVVQVPKDQIYRVPPPENARIVEKYRNPMNKRRNSCCTRVCWIILVLFVIGISIGITLVILHKVYSPKGAILFIADVHVKNQSRPRYEFTMKVKNPNENVAISYENDGDAFLLLKKKKLASGKFPQLEQEGGDSRNVRITLTGSNTVVPDEVSKSMHDKKTERAVSLQLEMNLKGEMNIGFLNLWSKDMHVVCDFKVSTLRTGTKVLSQKCDTQIK
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
SVSRPVGSLDLTPEEDYDSNTYVVQVPKDQIYRVPPPENARIVEKYRNPMNKRRNSCCTRVCWIILVLFVIGISIGITLVILHKVYSPKGAILFIADVHVKNQSRPRYEFTMKVKNPNENVAISYENDGDAFLLLKKKKLASGKFPQLEQEGGDSRNVRITLTGSNTVVPDEVSKSMHDKKTERAVSLQLEMNLKGEMNIGFLNLWSKDMHVVCDFKVSTLRTGTKVLSQKCDTQIK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	237
224081162	278	predicted protein [Populus trichocarpa]	0.940	0.802	0.395	4e-38
255584856	277	conserved hypothetical protein [Ricinus	0.940	0.805	0.380	2e-36
356510197	255	PREDICTED: uncharacterized protein LOC10	0.928	0.862	0.357	6e-35
255545676	243	conserved hypothetical protein [Ricinus	0.869	0.847	0.390	1e-33
356518493	259	PREDICTED: uncharacterized protein LOC10	0.919	0.841	0.362	7e-32
15227160	291	hydroxyproline-rich glycoprotein-like pr	0.864	0.704	0.348	5e-28
255646095	227	unknown [Glycine max]	0.793	0.828	0.354	5e-28
116831103	292	unknown [Arabidopsis thaliana]	0.864	0.702	0.348	5e-28
357493591	255	Avr9/Cf-9 rapidly elicited protein [Medi	0.983	0.913	0.274	4e-27
224082144	257	predicted protein [Populus trichocarpa]	0.919	0.848	0.321	3e-26

>gi|224081162|ref|XP_002306315.1| predicted protein [Populus trichocarpa] gi|222855764|gb|EEE93311.1| predicted protein [Populus trichocarpa]

 Score =  164 bits (414), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 91/230 (39%), Positives = 146/230 (63%), Gaps = 7/230 (3%)

Query: 15  EDYDSNTYVVQVPKDQIYRVPPPENARIVEKYRNPMNKRRNSCCTRVCWIILVLFVIGIS 74
           E  +S TY++Q+PKDQI+  P PENA I E++R P  K + SCC R   II+ L ++ + 
Sbjct: 49  EAIESETYIIQIPKDQIFSTPSPENAIIAERHRLPQKKDQRSCCNRWLCIIVALILLALI 108

Query: 75  IGITLVILHKVYSPKGAILFIADVHVKN------QSRPRYEFTMKVKNPNENVAISYEND 128
           IGI +   H +++PK  +  + +V VK       ++   Y+ T + +NPN  ++ISY N 
Sbjct: 109 IGIIVWTFHILFTPKVPLFTVVNVTVKKPLSTHKKAHLGYQITFETENPNGRLSISYVNK 168

Query: 129 GDAFLLLKKKKLASGKFPQLEQEGGDSRNVRITLTGSNTVVPDEVSKSMHDKKTERAVSL 188
           GDA LL K  K+ +GKFP+++Q+   S+++ + L+GS+  +PD+V  S+ DK+ ++ VSL
Sbjct: 169 GDATLLYKNHKIGTGKFPEVDQDADSSKSIELGLSGSSGPLPDDVETSIQDKRGKKHVSL 228

Query: 189 QLEMNLKGEM-NIGFLNLWSKDMHVVCDFKVSTLRTGTKVLSQKCDTQIK 237
            + M++   M  +G + L  K+++VVC FKVS+L  G  VLSQKC ++ K
Sbjct: 229 SIRMDVPVTMKGLGGIKLRRKEINVVCTFKVSSLGAGKDVLSQKCQSKFK 278

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255584856|ref|XP_002533144.1| conserved hypothetical protein [Ricinus communis] gi|223527055|gb|EEF29240.1| conserved hypothetical protein [Ricinus communis]

 Score =  158 bits (400), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 92/242 (38%), Positives = 139/242 (57%), Gaps = 19/242 (7%)

Query: 7   GSL-DLTPEEDYDSNTYVVQVPKDQIYRVPPPENARIVEKYRNPMNKRRNSCCTRVCWII 65
           GS+ D +     +S TYV+Q+PK+QI+ VPPPENA I E+YRNP   +       +C II
Sbjct: 42  GSIQDRSSTASIESETYVIQIPKEQIFSVPPPENAIIAERYRNPETTKSPRRKRLLCAII 101

Query: 66  LVLFVIGISIGITLVILHKVYSPKGAILFIADVHV---------KNQSRPRYEFTMKVKN 116
             +  + + IG+T+  LH V++P+     I +VH+         K  +   YE ++  KN
Sbjct: 102 TFVVFVAM-IGLTIGALHVVFNPEVPSFSIVNVHLINNPHSSHHKKNTHIGYEISLSAKN 160

Query: 117 PNENVAISYENDGDAFLLLKKKKLASGKFPQLEQEGGDSRNVRITLTGSNTVVPDEVSKS 176
            N  +  SY N G   LL K  K+ +GKFP+  Q+   S+ ++++LT SN  +P ++ +S
Sbjct: 161 KNARMQNSYGN-GHTTLLFKGHKIGTGKFPEFGQDADSSKKIQLSLTSSNGALPHDIEES 219

Query: 177 MHDKKTERAVSLQLEMNLKGEMNIGFLNLWSKDMHVVCDFKVSTLRTGTK--VLSQKCDT 234
           + D+K +R V+L L+MN   +M      LWSK + VVC+FKV +L +  K  VLSQ C T
Sbjct: 220 IGDEKGKRHVTLSLKMNFPLKM-----KLWSKVIDVVCNFKVGSLGSAGKNNVLSQHCQT 274

Query: 235 QI 236
            I
Sbjct: 275 NI 276

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356510197|ref|XP_003523826.1| PREDICTED: uncharacterized protein LOC100790243 [Glycine max]

 Score =  153 bits (386), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 80/224 (35%), Positives = 127/224 (56%), Gaps = 4/224 (1%)

Query: 16  DYDSNTYVVQVPKDQIYRVPPPENARIVEKYRN--PMNKRRNSCCTRVCWIILVLFVIGI 73
           D++  TYVVQVPKDQ+YRVPPPENARI E ++   P   + + CC       ++ FV+ I
Sbjct: 30  DFNPGTYVVQVPKDQVYRVPPPENARIAESHKKAPPKAAKTSRCCLFCVLFFIIFFVLLI 89

Query: 74  SIGITLV-ILHKVYSPKGAILFIADVHV-KNQSRPRYEFTMKVKNPNENVAISYENDGDA 131
            +G  L  +   + +PK     I    V + +  P+Y+ T++V N N +V +SY+N G  
Sbjct: 90  LLGAVLGGLFSMLLTPKDPQFSITRFKVVETKPHPKYDVTLEVHNLNSDVGVSYKNKGHV 149

Query: 132 FLLLKKKKLASGKFPQLEQEGGDSRNVRITLTGSNTVVPDEVSKSMHDKKTERAVSLQLE 191
            L L+++++ASG +P   Q+  D     +TLT S   +P EV +S+ + K +  V+  L 
Sbjct: 150 SLSLRRQEVASGAYPSFNQDAHDRTTFGVTLTSSKVGLPKEVEESVTNDKKKVNVTFSLA 209

Query: 192 MNLKGEMNIGFLNLWSKDMHVVCDFKVSTLRTGTKVLSQKCDTQ 235
           ++    M +G L   +    V C+ K+ TL   T+VLSQ+C+T+
Sbjct: 210 IHALARMKMGLLRSGTMKFDVTCNVKLDTLAKTTQVLSQQCETK 253

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255545676|ref|XP_002513898.1| conserved hypothetical protein [Ricinus communis] gi|223546984|gb|EEF48481.1| conserved hypothetical protein [Ricinus communis]

 Score =  149 bits (376), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 87/223 (39%), Positives = 123/223 (55%), Gaps = 17/223 (7%)

Query: 17  YDSNTYVVQVPKDQIYRVPPPENARIVEKYRNPMNKRRNSCCTRV--CWIILVLFVIGIS 74
           ++S TYVVQVPKDQIYRVPPPENA IVE++RNP  K+R   C+    C++I+   VI I+
Sbjct: 31  FESGTYVVQVPKDQIYRVPPPENALIVERHRNPQQKKRTRYCSFFCCCFLIVATAVIAIA 90

Query: 75  IGITLVILHKVYSPKGAILFIADVHVKNQSR---PRYEFTMKVKNPNENVAISYENDGDA 131
           +GI L      +  K     +    VKN +    P Y+ T+KV+NPN+   I Y   G A
Sbjct: 91  LGIGLSF--AFFKSKNPEFRVQRFIVKNNTSHHYPDYDITLKVRNPNDKSDILYMQGGVA 148

Query: 132 FLLLKKKKLASGKFPQLEQEGGDSRNVRITLTGSNTVVPDEVSKSMHDKKTERAVSLQLE 191
            LL K +K+A+GKFP   Q+  +S  + I L G          +S+   K +  VS  L+
Sbjct: 149 SLLYKDQKMAAGKFPTFHQDNKNSTYIGIVLKG----------QSIKGAKPKMHVSFSLK 198

Query: 192 MNLKGEMNIGFLNLWSKDMHVVCDFKVSTLRTGTKVLSQKCDT 234
           + +  +M           + V C+F V TL  GT++LSQ+C T
Sbjct: 199 IGIPAKMKTSSFISGEVKIVVKCEFMVDTLAKGTRILSQQCQT 241

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356518493|ref|XP_003527913.1| PREDICTED: uncharacterized protein LOC100816505 [Glycine max]

 Score =  143 bits (360), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 83/229 (36%), Positives = 127/229 (55%), Gaps = 11/229 (4%)

Query: 16  DYDSNTYVVQVPKDQIYRVPPPENARIVEKY-RNPMNKR-RNSCCTRVCWIILVLFVI-- 71
           D D  TYVVQVPKDQ+YRVPPPENA+I E + ++P NK  + S C   C +  ++F++  
Sbjct: 31  DLDPGTYVVQVPKDQVYRVPPPENAQIAESHKKSPPNKEAKTSRCCLCCVLFFIIFLVLA 90

Query: 72  ---GISIGITLVILHKVYSPKGAILFIADVHVKNQSRPRYEFTMKVKNPNENVAISYEND 128
              G  +G    +L     PK +I     V  K    P+Y+ T++V NPN +V I Y   
Sbjct: 91  ILLGAVLGGLFSMLLTPEDPKFSITSFKVVETK--PHPKYDVTLEVHNPNSDVGILYNGK 148

Query: 129 GDAFLLLKKKK-LASGKFPQLEQEGGDSRNVRITLTGSNTV-VPDEVSKSMHDKKTERAV 186
           G   L L++++ +ASG +P   Q+  D+    +TLT S+   +P EV +S+ + K + +V
Sbjct: 149 GHVSLSLRRQENIASGAYPTFRQDSHDTTTFGLTLTSSSKAGLPKEVEESVRNDKKKVSV 208

Query: 187 SLQLEMNLKGEMNIGFLNLWSKDMHVVCDFKVSTLRTGTKVLSQKCDTQ 235
           +  L ++    M +G L   +    V C  K+ TL   T VLSQ+C+T+
Sbjct: 209 TFSLAIHALAHMKMGLLRSGTMKFDVTCKVKLDTLAKTTHVLSQQCETK 257

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15227160|ref|NP_179808.1| hydroxyproline-rich glycoprotein-like protein [Arabidopsis thaliana] gi|4567206|gb|AAD23622.1| hypothetical protein [Arabidopsis thaliana] gi|91806238|gb|ABE65847.1| hydroxyproline-rich glycoprotein family protein [Arabidopsis thaliana] gi|330252181|gb|AEC07275.1| hydroxyproline-rich glycoprotein-like protein [Arabidopsis thaliana]

 Score =  130 bits (327), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 78/224 (34%), Positives = 119/224 (53%), Gaps = 19/224 (8%)

Query: 21  TYVVQVPKDQIYRVPPPENARIVEK-YRNPMNKRRNSCCTRVCWIILVLFVIGISIGITL 79
           TYVVQVP+DQ+Y  PPPE+A+ VEK  +NP   ++  C  R+ W  ++L + G  +G  +
Sbjct: 79  TYVVQVPRDQVYWTPPPEHAKYVEKRSKNPEKNKKKGCSKRLLWFFIILVIFGFLLGAII 138

Query: 80  VILHKVYSPKGAILFIADVHVKNQSRPRYEFTMKVKNPNENVAISY--ENDGDAFLLLKK 137
           +ILH  ++P   +  +  + V   +   +E T++ +NP  N+ + Y  E +G   L  K 
Sbjct: 139 LILHFAFNPTLPVFAVERLTVNPSN---FEVTLRAENPTSNMGVRYMMEKNGVVSLTYKN 195

Query: 138 KKLASGKFPQLEQEGGDSRNVRITLTGS--NTVVPDEVSKSMHDKKTERAVSLQLEMNLK 195
           K L SGKFP L Q    S  V + L GS  N VV          + +++ V L L M LK
Sbjct: 196 KSLGSGKFPGLSQAASGSDKVNVKLNGSTKNAVV--------QPRGSKQPVVLMLNMELK 247

Query: 196 GEMNIGFLNLWSKDMHVVCDFKVSTLRTGTKV--LSQKCDTQIK 237
            E   G +   +K++ V CD KV  L    KV  +S+ C+++ K
Sbjct: 248 AEYEAGPVKR-NKEVVVTCDVKVKGLLDAKKVEIVSENCESEFK 290

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255646095|gb|ACU23534.1| unknown [Glycine max]

 Score =  130 bits (327), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 68/192 (35%), Positives = 108/192 (56%), Gaps = 4/192 (2%)

Query: 16  DYDSNTYVVQVPKDQIYRVPPPENARIVEKYRN--PMNKRRNSCCTRVCWIILVLFVIGI 73
           D++  TYVVQVPKDQ+YRVPPPENARI E ++   P   + + CC       ++ FV+ I
Sbjct: 30  DFNPGTYVVQVPKDQVYRVPPPENARIAESHKKAPPKAAKTSRCCLFCVLFFIIFFVLLI 89

Query: 74  SIGITLV-ILHKVYSPKGAILFIADVHV-KNQSRPRYEFTMKVKNPNENVAISYENDGDA 131
            +G  L  +   + +PK     I    V + +  P+Y+ T++V N N +V +SY+N G  
Sbjct: 90  LLGAVLGGLFSMLLTPKDPQFSITRFKVVETKPHPKYDVTLEVHNLNSDVGVSYKNKGHV 149

Query: 132 FLLLKKKKLASGKFPQLEQEGGDSRNVRITLTGSNTVVPDEVSKSMHDKKTERAVSLQLE 191
            L L+++++ASG +P   Q+  D     +TLT S   +P EV +S+ + K +  V+  L 
Sbjct: 150 SLSLRRQEVASGAYPSFNQDAHDRTTFGVTLTSSKVGLPKEVEESVTNDKKKVNVTFSLA 209

Query: 192 MNLKGEMNIGFL 203
           ++    M +G L
Sbjct: 210 IHALARMKMGLL 221

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|116831103|gb|ABK28506.1| unknown [Arabidopsis thaliana]

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 78/224 (34%), Positives = 119/224 (53%), Gaps = 19/224 (8%)

Query: 21  TYVVQVPKDQIYRVPPPENARIVEK-YRNPMNKRRNSCCTRVCWIILVLFVIGISIGITL 79
           TYVVQVP+DQ+Y  PPPE+A+ VEK  +NP   ++  C  R+ W  ++L + G  +G  +
Sbjct: 79  TYVVQVPRDQVYWTPPPEHAKYVEKRSKNPEKNKKKGCSKRLLWFFIILVIFGFLLGAII 138

Query: 80  VILHKVYSPKGAILFIADVHVKNQSRPRYEFTMKVKNPNENVAISY--ENDGDAFLLLKK 137
           +ILH  ++P   +  +  + V   +   +E T++ +NP  N+ + Y  E +G   L  K 
Sbjct: 139 LILHFAFNPTLPVFAVERLTVNPSN---FEVTLRAENPTSNMGVRYMMEKNGVVSLTYKN 195

Query: 138 KKLASGKFPQLEQEGGDSRNVRITLTGS--NTVVPDEVSKSMHDKKTERAVSLQLEMNLK 195
           K L SGKFP L Q    S  V + L GS  N VV          + +++ V L L M LK
Sbjct: 196 KSLGSGKFPGLSQAASGSDKVNVKLNGSTKNAVV--------QPRGSKQPVVLMLNMELK 247

Query: 196 GEMNIGFLNLWSKDMHVVCDFKVSTLRTGTKV--LSQKCDTQIK 237
            E   G +   +K++ V CD KV  L    KV  +S+ C+++ K
Sbjct: 248 AEYEAGPVKR-NKEVVVTCDVKVKGLLDAKKVEIVSENCESEFK 290

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357493591|ref|XP_003617084.1| Avr9/Cf-9 rapidly elicited protein [Medicago truncatula] gi|355518419|gb|AET00043.1| Avr9/Cf-9 rapidly elicited protein [Medicago truncatula]

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 67/244 (27%), Positives = 120/244 (49%), Gaps = 11/244 (4%)

Query: 3   SRPVGSLDLTPEEDYDSNTYVVQVPKDQIYRVPPPENARIVEKYRNPMNKRRNSCCTRVC 62
           S PV       +      TYV+++PKD ++RVPPPENAR  E+Y    ++R   CC  +C
Sbjct: 10  SPPVSPKPPLDKPVPPPGTYVIKIPKDIVHRVPPPENARRYEQYTRKKHRRNRHCCC-LC 68

Query: 63  WIILVLFVIGISIGITLVILHKVYSPKGAILFIADVHVKNQS----------RPRYEFTM 112
           W I ++F++   +GI   I + V+ PK     I ++ ++  +           P ++ T+
Sbjct: 69  WFIGIIFILIALLGIAAGIFYLVFRPKAPNYTIENITIRGINITSPSSTTGISPEFDVTV 128

Query: 113 KVKNPNENVAISYENDGDAFLLLKKKKLASGKFPQLEQEGGDSRNVRITLTGSNTVVPDE 172
           K  NPN+ + ISYE D  A +  K  +L +G  P   Q   +    +  L G+   +  E
Sbjct: 129 KADNPNDKIGISYEKDSSAEIFYKDMRLCNGILPSFYQPSNNVTVFKTMLKGNGVKMSSE 188

Query: 173 VSKSMHDKKTERAVSLQLEMNLKGEMNIGFLNLWSKDMHVVCDFKVSTLRTGTKVLSQKC 232
             +++   +T++ V L +++    ++ +G +  W   + V CD  V  L    K++S+ C
Sbjct: 189 DQRALVKAQTKQEVQLMVKLRAPVKIKVGSVKTWKITVKVDCDLMVDKLTANAKIVSRSC 248

Query: 233 DTQI 236
             ++
Sbjct: 249 TFRV 252

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224082144|ref|XP_002306581.1| predicted protein [Populus trichocarpa] gi|222856030|gb|EEE93577.1| predicted protein [Populus trichocarpa]

 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 73/227 (32%), Positives = 121/227 (53%), Gaps = 9/227 (3%)

Query: 17  YDSNTYVVQVPKDQIYRVPPPENARIVEKYRNPMNKR-RNSCCTRVCWIILVLFVIGISI 75
           ++  TYV+Q+P+DQIYRVPPP NA + ++ RNP  K+ ++ C     W   +    GI++
Sbjct: 29  FEPGTYVIQIPRDQIYRVPPPGNASVAQRQRNPHQKKHKSCCGCSCFWCCFIAIASGIAV 88

Query: 76  GITLVILHKVY-SPKGAILFIADVHVKNQ--SRPRYEFT-----MKVKNPNENVAISYEN 127
            +T+V L  +   PK     +    VKN   S+ +Y +T     + V N N   +I Y+ 
Sbjct: 89  AVTIVGLSFILLKPKDPEFQVQRFVVKNPQVSKHKYSYTNYDIRLNVHNSNRRSSILYQQ 148

Query: 128 DGDAFLLLKKKKLASGKFPQLEQEGGDSRNVRITLTGSNTVVPDEVSKSMHDKKTERAVS 187
            G   L  +++ +A+GKFP   Q   +S ++ I L G+   +P +V  S+ ++K++   S
Sbjct: 149 GGAVSLSFRQQNVATGKFPTFHQGHKNSTDIGIVLKGTGVGLPKDVQNSLRNRKSKVPDS 208

Query: 188 LQLEMNLKGEMNIGFLNLWSKDMHVVCDFKVSTLRTGTKVLSQKCDT 234
             L+MN+  +M          ++ V CDF V +L   T +LSQ+C T
Sbjct: 209 FSLKMNVPVKMKTSGFKTGRAEIVVTCDFTVQSLAQDTHILSQECQT 255

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	237
TAIR|locus:2060400	291	AT2G22180 "AT2G22180" [Arabido	0.898	0.731	0.340	1.5e-28
TAIR|locus:2059274	260	AT2G27080 "AT2G27080" [Arabido	0.907	0.826	0.266	2.6e-24
TAIR|locus:2178993	281	AT5G21130 "AT5G21130" [Arabido	0.890	0.750	0.269	1.4e-18
TAIR|locus:2020163	239	AT1G54540 "AT1G54540" [Arabido	0.776	0.769	0.239	4.2e-10
TAIR|locus:2018531	252	AT1G65690 "AT1G65690" [Arabido	0.793	0.746	0.226	6.6e-09
TAIR|locus:504955357	253	AT4G39745 "AT4G39745" [Arabido	0.514	0.482	0.281	4e-08
TAIR|locus:2167489	248	NHL25 "AT5G36970" [Arabidopsis	0.776	0.741	0.230	1.3e-07
TAIR|locus:2143064	287	EMB3135 "AT5G11890" [Arabidops	0.877	0.724	0.214	2.9e-07
TAIR|locus:2116312	242	AT4G26820 "AT4G26820" [Arabido	0.620	0.607	0.240	9.5e-07
TAIR|locus:2007968	264	AT1G17620 "AT1G17620" [Arabido	0.755	0.678	0.238	1.3e-06

TAIR|locus:2060400 AT2G22180 "AT2G22180" [Arabidopsis thaliana (taxid:3702)]

 Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
 Identities = 79/232 (34%), Positives = 118/232 (50%)

Query:    13 PEEDYDSNTYVVQVPKDQIYRVPPPENARIVEKY-RNPMNKRRNSCCTRVCWIILVLFVI 71
             P+   +  TYVVQVP+DQ+Y  PPPE+A+ VEK  +NP   ++  C  R+ W  ++L + 
Sbjct:    71 PDSIPELETYVVQVPRDQVYWTPPPEHAKYVEKRSKNPEKNKKKGCSKRLLWFFIILVIF 130

Query:    72 GISIGITLVILHKVYSPKGAILFIADVHVKNQSRPRYEFTMKVKNPNENVAISY--ENDG 129
             G  +G  ++ILH  ++P   +  +  + V N S   +E T++ +NP  N+ + Y  E +G
Sbjct:   131 GFLLGAIILILHFAFNPTLPVFAVERLTV-NPSN--FEVTLRAENPTSNMGVRYMMEKNG 187

Query:   130 DAFXXXXXXXXASGKFPQLEQEGGDSRNVRITLTGS--NTVVPDEVSKSMHDKKTERAVS 187
                         SGKFP L Q    S  V + L GS  N VV    SK        + V 
Sbjct:   188 VVSLTYKNKSLGSGKFPGLSQAASGSDKVNVKLNGSTKNAVVQPRGSK--------QPVV 239

Query:   188 LQLEMNLKGEMNIGFLNLWSKDMHVVCDFKVSTLRTGTKV--LSQKCDTQIK 237
             L L M LK E   G +   +K++ V CD KV  L    KV  +S+ C+++ K
Sbjct:   240 LMLNMELKAEYEAGPVKR-NKEVVVTCDVKVKGLLDAKKVEIVSENCESEFK 290

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0009827 "plant-type cell wall modification" evidence=RCA

GO:0009860 "pollen tube growth" evidence=RCA

TAIR|locus:2059274 AT2G27080 "AT2G27080" [Arabidopsis thaliana (taxid:3702)]

 Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
 Identities = 60/225 (26%), Positives = 116/225 (51%)

Query:    20 NTYVVQVPKDQIYRVPPPENARIVEKYRNPMNKRRNS-CCTRVCWIILVLFVIGISIGIT 78
             +TYV+QVPKDQIYR+PPPENA   E+       R N  CC   C  +  +F++ +  GI+
Sbjct:    35 STYVIQVPKDQIYRIPPPENAHRFEQLSRKKTNRSNCRCC--FCSFLAAVFILIVLAGIS 92

Query:    79 LVILHKVY---SPKGAI--LFIADVHVKNQS--RPRYEFTMKVKNPNENVAISYENDGDA 131
               +L+ +Y   +PK +I    ++ +++ + S   P +  T++ +N N  + + YE +   
Sbjct:    93 FAVLYLIYRPEAPKYSIEGFSVSGINLNSTSPISPSFNVTVRSRNGNGKIGVYYEKESSV 152

Query:   132 FXXXXXXXXASGKFPQLEQEGGDSRNVRITLTGSNTVVPDEVSKSMHDKKTERAVSLQLE 191
                      ++G  P   Q   +   V++ L+GS   +   + K M ++ +++ V  +L+
Sbjct:   153 DVYYNDVDISNGVMPVFYQPAKNVTVVKLVLSGSKIQLTSGMRKEMRNEVSKKTVPFKLK 212

Query:   192 MNLKGEMNIGFLNLWSKDMHVVCDFKVSTLRTGTKVLSQKCDTQI 236
             +    ++  G +  W+  ++V CD  V  L   ++++S+KC   +
Sbjct:   213 IKAPVKIKFGSVKTWTMIVNVDCDVTVDKLTAPSRIVSRKCSHDV 257

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2178993 AT5G21130 "AT5G21130" [Arabidopsis thaliana (taxid:3702)]

 Score = 224 (83.9 bits), Expect = 1.4e-18, P = 1.4e-18
 Identities = 60/223 (26%), Positives = 100/223 (44%)

Query:    21 TYVVQVPKDQIYRVPPPENARIVEKYRNPMNKRRNSCCTR-VCWIILVLFVIGISIGITL 79
             TYV+++PKDQIYRVPPPENA   E Y +   K   SCC R +C+ +  L +I +   I  
Sbjct:    57 TYVIKLPKDQIYRVPPPENAHRYE-YLS-RRKTNKSCCRRCLCYSLSALLIIIVLAAIAF 114

Query:    80 VILHKVYSPKGAILFIADVHVKN----QSRPRYEFTMKVKNPNENV----AISYENDGDA 131
                + VY P      ++ V V       S P +   +++K  ++NV     + YE   +A
Sbjct:   115 GFFYLVYQPHKPQFSVSGVSVTGINLTSSSP-FSPVIRIKLRSQNVKGKLGLIYEKGNEA 173

Query:   132 FXXXXXXXXASGKFPQLEQEGGDSRNVRITLTGSNTVVPDEVSKSMHDKKTERAVSLQLE 191
                       +G+F   +Q  G+   +   L GS+  +     K + + + +  V   L 
Sbjct:   174 DVFFNGTKLGNGEFTAFKQPAGNVTVIVTVLKGSSVKLKSSSRKELTESQKKGKVPFGLR 233

Query:   192 MNLKGEMNIGFLNLWSKDMHVVCDFKVSTLRTGTKVLSQKCDT 234
             +    +  +G +  W+  + V C   V  L     V ++ C+T
Sbjct:   234 IKAPVKFKVGSVTTWTMTITVDCKITVDKLTASATVKTENCET 276

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2020163 AT1G54540 "AT1G54540" [Arabidopsis thaliana (taxid:3702)]

 Score = 155 (59.6 bits), Expect = 4.2e-10, P = 4.2e-10
 Identities = 47/196 (23%), Positives = 84/196 (42%)

Query:    51 NKRRNSCCTRVCWIILVLFVIGISIGITLVILHKVYSPKGAILFIADVHVKNQS-----R 105
             +K RN CC   CW++ +L +  I++ I + +++ V+ PK     +  + V N        
Sbjct:    44 SKNRNMCCKIFCWVLSLLVIALIALAIAVAVVYFVFHPKLPSYEVNSLRVTNLGINLDLS 103

Query:   106 PRYEFTMKV--KNPNENVAISYENDGDAFXXXXXXXXASGKFPQLEQEGGDSRNVRITLT 163
                EF +++  +NPNE + I YE  G             G  P+  Q   +   + + LT
Sbjct:   104 LSAEFKVEITARNPNEKIGIYYEKGGHIGVWYDKTKLCEGPIPRFYQGHRNVTKLNVALT 163

Query:   164 GSNTVVPDEVSKSMHDKKTERAVSLQLEMNLKGEMNIGFLNLWSKDMHVV--CDFKVSTL 221
             G        ++     ++T R V L L++N    + +G  NL  K + ++  C   V +L
Sbjct:   164 GRAQYGNTVLAALQQQQQTGR-VPLDLKVNAPVAIKLG--NLKMKKIRILGSCKLVVDSL 220

Query:   222 RTGTKVLSQKCDTQIK 237
              T   +  +  D   K
Sbjct:   221 STNNNINIKASDCSFK 236

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2018531 AT1G65690 "AT1G65690" [Arabidopsis thaliana (taxid:3702)]

 Score = 148 (57.2 bits), Expect = 6.6e-09, P = 6.6e-09
 Identities = 45/199 (22%), Positives = 87/199 (43%)

Query:    49 PMNKRRNSCCTRVCWIILVLFVIGISIGITLVILHKVYSPKGAILFIADVHVK----NQS 104
             P  KRR+ CC   C+    L ++ +++G ++ IL+ V+ PK     I  + +     NQ 
Sbjct:    54 PPKKRRSCCCRCFCYTFCFLLLLVVAVGASIGILYLVFKPKLPDYSIDRLQLTRFALNQD 113

Query:   105 RP---RYEFTMKVKNPNENVAISYENDGDAFXXXXXXXXASGKFPQLEQEGGDSRNVRIT 161
                   +  T+  KNPNE + I YE+             ++G  P+  Q   ++  + + 
Sbjct:   114 SSLTTAFNVTITAKNPNEKIGIYYEDGSKITVWYMEHQLSNGSLPKFYQGHENTTVIYVE 173

Query:   162 LTGSNTVVPDEVSKSMHDKKTERA-VSLQLEMNLKGEMNIGFLNLWSKDMHVVCDFKVST 220
             +TG  T     +  ++ +++     + L++ +N    +  G L L+     V C   V +
Sbjct:   174 MTGQ-TQNASGLRTTLEEQQQRTGNIPLRIRVNQPVRVKFGKLKLFEVRFLVRCGVFVDS 232

Query:   221 LRTGT--KVLSQKCDTQIK 237
             L T    K+ S  C  +++
Sbjct:   233 LATNNVIKIQSSSCKFRLR 251

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0006865 "amino acid transport" evidence=RCA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA

TAIR|locus:504955357 AT4G39745 "AT4G39745" [Arabidopsis thaliana (taxid:3702)]

 Score = 96 (38.9 bits), Expect = 4.0e-08, Sum P(2) = 4.0e-08
 Identities = 40/142 (28%), Positives = 61/142 (42%)

Query:    99 HVKNQSRPR-YEFTMKVKNPNENVAISYENDGDAFXXXXXXXXASGKFPQLEQEGGDSRN 157
             +VK   + R +E  +  KNP   + ++Y+  G             G FP+L      S  
Sbjct:   124 NVKKLEKSRHFEIMLTSKNPTSTMWVTYK--GLVSLTYKNKNLGQGNFPELSLAVSGSHT 181

Query:   158 VRITLTGS-NT-VVPDEVSKSMHDKKTERAVSLQLEMNLKGEMNIGFLNLWSKDMHVVCD 215
             V + L  S N  V+P EV            VSL L M L      G +   +K++ V CD
Sbjct:   182 VNLKLDRSMNAAVLPPEV------------VSLVLTMGLDAGFGTGLVKR-AKEVAVTCD 228

Query:   216 FKVSTLRTGTKV--LSQKCDTQ 235
              KV+ L    KV  +S+ C+++
Sbjct:   229 IKVNGLLDAHKVEIVSESCESE 250

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2167489 NHL25 "AT5G36970" [Arabidopsis thaliana (taxid:3702)]

 Score = 138 (53.6 bits), Expect = 1.3e-07, P = 1.3e-07
 Identities = 45/195 (23%), Positives = 84/195 (43%)

Query:    49 PMNKRRN-SC-CTRVCWIILVLFVIGISIGITLVILHKVYSPKGAILFIADVHVK----N 102
             P  K+ + SC C  VC+ +LVLF++ + +G  + IL+ V+ PK     I  + +     N
Sbjct:    48 PREKKGSRSCWCRCVCYTLLVLFLLIVIVGAIVGILYLVFRPKFPDYNIDRLQLTRFQLN 107

Query:   103 QS---RPRYEFTMKVKNPNENVAISYENDGDAFXXXXXXXXASGKFPQLEQEGGDSRNVR 159
             Q       +  T+  KNPNE + I YE+             ++G  P+  Q   ++  + 
Sbjct:   108 QDLSLSTAFNVTITAKNPNEKIGIYYEDGSKISVLYMQTRISNGSLPKFYQGHENTTIIL 167

Query:   160 ITLTGSNTVVPDEVSKSMHDKKTERAVSLQLEMNLKGEMNIGFLNLWSKDMHVVCDFKVS 219
             + +TG        ++     ++   ++ L++ +     + +G L L      V C   V 
Sbjct:   168 VEMTGFTQNATSLMTTLQEQQRLTGSIPLRIRVTQPVRIKLGKLKLMKVRFLVRCGVSVD 227

Query:   220 TLRTGT--KVLSQKC 232
             +L   +  +V S  C
Sbjct:   228 SLAANSVIRVRSSNC 242

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0009814 "defense response, incompatible interaction" evidence=IEP

GO:0009863 "salicylic acid mediated signaling pathway" evidence=IEP

TAIR|locus:2143064 EMB3135 "AT5G11890" [Arabidopsis thaliana (taxid:3702)]

 Score = 137 (53.3 bits), Expect = 2.9e-07, P = 2.9e-07
 Identities = 50/233 (21%), Positives = 100/233 (42%)

Query:    24 VQVPKDQ-IYRVPPPENARIVEKYRNPMNKRRNSCCTRVC-WIILVLFVIGISIGITLVI 81
             V +P ++ +YR P P + R    +++  + RR  CC   C W IL++ ++ +   I    
Sbjct:    49 VYIPANRPVYR-PQPYSRR--HHHQSRPSCRRICCCC--CFWSILIILILALMTAIAATA 103

Query:    82 LHKVYSPKGAILFIADVHVKNQSRPR------------YEFTMKVKNPNENVAISYEN-D 128
             ++ +Y P+     +  + +   +               + FT+  +NPN++++ SY+   
Sbjct:   104 MYVIYHPRPPSFSVPSIRISRVNLTTSSDSSVSHLSSFFNFTLISENPNQHLSFSYDPFT 163

Query:   129 GDAFXXXXXXXXASGKFPQLEQEGGDSRN---VRITLTGSNTVVPDEVSKSMHDKKTERA 185
                          +G  P    + G+  +   V  T T +  + PDE +K +    T   
Sbjct:   164 VTVNSAKSGTMLGNGTVPAFFSDNGNKTSFHGVIATSTAARELDPDE-AKHLRSDLTRAR 222

Query:   186 VSLQLEMNLKGEMNIGFLNLWSKDMHVVCDFKVSTLRTG-TKVLSQKCDTQIK 237
             V  ++EM  K +M +G L     ++ V C+    T+  G T +++    T+ K
Sbjct:   223 VGYEIEMRTKVKMIMGKLKSEGVEIKVTCEGFEGTIPKGKTPIVATSKKTKCK 275

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2116312 AT4G26820 "AT4G26820" [Arabidopsis thaliana (taxid:3702)]

 Score = 131 (51.2 bits), Expect = 9.5e-07, P = 9.5e-07
 Identities = 38/158 (24%), Positives = 70/158 (44%)

Query:    64 IILVLFVIGISI-GITLVILHKVYSPKGAILFIADVHVK--NQSRPRYEFTMKVKNPNEN 120
             + L + ++G  + G+T VIL    +P    + +  +H+   N + P +  T  +KNPNE 
Sbjct:    53 LFLAITIMGACVAGVTFVIL---ITPTPPTVHVQSMHISFANHNLPVWSATFSIKNPNEK 109

Query:   121 VAISYENDGDAFXXXXXXXXASGKFPQLEQEGGDSRNVRITLTGSNTVVPDEVSKSMHDK 180
             + ++YEN    +        ++ +     Q+GG+   V I       V+ +E +  M D+
Sbjct:   110 LHVTYENPS-VWLVHRGKLVSTARADSFWQKGGEKNEV-IVKRNETKVIDEEAAWEMEDE 167

Query:   181 KTERAVSLQLEMNLKGEMNI--GFLNLWSKD-MHVVCD 215
                    + L+M   G +    G   LW +  M  VC+
Sbjct:   168 VAVTGGVVGLDMVFSGRVGFYPGTSALWGEQYMSAVCE 205

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2007968 AT1G17620 "AT1G17620" [Arabidopsis thaliana (taxid:3702)]

 Score = 131 (51.2 bits), Expect = 1.3e-06, P = 1.3e-06
 Identities = 48/201 (23%), Positives = 88/201 (43%)

Query:    46 YRNPMNKRRNS----CCTRVC-WIILVLFVIGISIGITLVILHKVYSPKGAILFIADVHV 100
             YR P  +RR S    CC R C W I V+ ++ + +     +++ +Y P+     ++++ +
Sbjct:    42 YRPPAGRRRTSHTRGCCCRCCCWTIFVIILLLLIVAAASAVVYLIYRPQRPSFTVSELKI 101

Query:   101 KNQS-----RPRYEFTMKV--KNPNENVAISYE-NDGDAFXXXXXXXX----ASGKFPQL 148
                +     R     ++ V  +NPN+NV   Y+  D   +              G     
Sbjct:   102 STLNFTSAVRLTTAISLSVIARNPNKNVGFIYDVTDITLYKASTGGDDDVVIGKGTIAAF 161

Query:   149 EQEGGDSRNVRITLTGSNTVVPDEVS--KSMHDKKTERAVSLQLEMNLKGEMNIGFLNLW 206
                  ++  +R T+ GS     DE+S  K   D K ++AV++++ +N K ++ +G L   
Sbjct:   162 SHGKKNTTTLRSTI-GSPPDELDEISAGKLKGDLKAKKAVAIKIVLNSKVKVKMGALKTP 220

Query:   207 SKDMHVVCD-FKVSTLRTGTK 226
                + V C+  KV    TG K
Sbjct:   221 KSGIRVTCEGIKV-VAPTGKK 240


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.134   0.393    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      237       229   0.00082  113 3  11 22  0.42    33
                                                     32  0.42    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  10
  No. of states in DFA:  589 (63 KB)
  Total size of DFA:  180 KB (2105 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  19.40u 0.08s 19.48t   Elapsed:  00:00:25
  Total cpu time:  19.40u 0.08s 19.48t   Elapsed:  00:00:25
  Start:  Fri May 10 13:01:34 2013   End:  Fri May 10 13:01:59 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0008150 "biological_process" evidence=ND

GO:0009506 "plasmodesma" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	237
PLN03160	219	uncharacterized protein; Provisional	100.0
PF03168	101	LEA_2: Late embryogenesis abundant protein; InterP	99.45
smart00769	100	WHy Water Stress and Hypersensitive response.	98.34
COG5608	161	LEA14-like dessication related protein [Defense me	97.62
PF12751	387	Vac7: Vacuolar segregation subunit 7; InterPro: IP	97.48
PF07092	238	DUF1356: Protein of unknown function (DUF1356); In	97.3
PLN03160	219	uncharacterized protein; Provisional	96.01
PF14155	112	DUF4307: Domain of unknown function (DUF4307)	88.96
TIGR02588	122	conserved hypothetical protein TIGR02588. The func	83.85
TIGR03602	56	streptolysinS bacteriocin protoxin, streptolysin S	80.78

>PLN03160 uncharacterized protein; Provisional

Probab=100.00  E-value=1.2e-36  Score=261.39  Aligned_cols=177  Identities=16%  Similarity=0.248  Sum_probs=145.3

Q ss_pred             CCCCceeehHHHHHHHHHHHHHHHHHHhheeeEEeecCCcEEEEEEEEEecC-------CCce----EEEEEEEECCCCe
Q 041440           52 KRRNSCCTRVCWIILVLFVIGISIGITLVILHKVYSPKGAILFIADVHVKNQ-------SRPR----YEFTMKVKNPNEN  120 (237)
Q Consensus        52 ~~~~~CC~c~~~~~~~ll~liil~gi~~~il~lv~rP~~P~fsV~s~~v~~~-------~s~~----~~ltl~~~NPN~k  120 (237)
                      +|+|+||+||+|++++   ++++++++++++|++||||+|+|+|+++++...       .+..    ++++++++|||. 
T Consensus        31 ~~r~~~~~c~~~~~a~---~l~l~~v~~~l~~~vfrPk~P~~~v~~v~l~~~~~~~~~~~~~~~n~tl~~~v~v~NPN~-  106 (219)
T PLN03160         31 TRRRNCIKCCGCITAT---LLILATTILVLVFTVFRVKDPVIKMNGVTVTKLELINNTTLRPGTNITLIADVSVKNPNV-  106 (219)
T ss_pred             cccccceEEHHHHHHH---HHHHHHHHHheeeEEEEccCCeEEEEEEEEeeeeeccCCCCceeEEEEEEEEEEEECCCc-
Confidence            3444566565665433   334466777788999999999999999999531       1334    444568899998 


Q ss_pred             eeEEEcCCcEEEEEECCEEeecCCCCCceecCCCeEEEEEEEEEeeecCChHHHHHhhccccCceEEEEEEEEEEEEEEE
Q 041440          121 VAISYENDGDAFLLLKKKKLASGKFPQLEQEGGDSRNVRITLTGSNTVVPDEVSKSMHDKKTERAVSLQLEMNLKGEMNI  200 (237)
Q Consensus       121 i~i~Y~~~~~v~v~Y~g~~Lg~g~~p~F~q~~~~tt~v~~~l~~~~~~l~~~~~~~L~~d~~~g~v~l~v~v~~~vr~kv  200 (237)
                      ++|+| +++++.++|+|+.+|++.+|+|+|++++++.+.+++...+..+..  ..+|.+|..+|.++|++++++++|+++
T Consensus       107 ~~~~Y-~~~~~~v~Y~g~~vG~a~~p~g~~~ar~T~~l~~tv~~~~~~~~~--~~~L~~D~~~G~v~l~~~~~v~gkVkv  183 (219)
T PLN03160        107 ASFKY-SNTTTTIYYGGTVVGEARTPPGKAKARRTMRMNVTVDIIPDKILS--VPGLLTDISSGLLNMNSYTRIGGKVKI  183 (219)
T ss_pred             eeEEE-cCeEEEEEECCEEEEEEEcCCcccCCCCeEEEEEEEEEEeceecc--chhHHHHhhCCeEEEEEEEEEEEEEEE
Confidence            89999 999999999999999999999999999999999998876554432  256888999999999999999999999


Q ss_pred             eeEEEcceeEEEEeEEEEeccCCCceeeccceeeecC
Q 041440          201 GFLNLWSKDMHVVCDFKVSTLRTGTKVLSQKCDTQIK  237 (237)
Q Consensus       201 g~~~s~~~~v~V~C~l~v~~~~~~~~i~~~~C~~~~~  237 (237)
                      |++.++++.++++|+++|+..+  ..+++++|+.+++
T Consensus       184 ~~i~k~~v~~~v~C~v~V~~~~--~~i~~~~C~~~~~  218 (219)
T PLN03160        184 LKIIKKHVVVKMNCTMTVNITS--QAIQGQKCKRHVD  218 (219)
T ss_pred             EEEEEEEEEEEEEeEEEEECCC--CEEeccEeccccc
Confidence            9999999999999999998743  4888999999875

>PF03168 LEA_2: Late embryogenesis abundant protein; InterPro: IPR004864 Different types of LEA proteins are expressed at different stages of late embryogenesis in higher plant seed embryos and under conditions of dehydration stress [, ]

Probab=99.45  E-value=1.6e-13  Score=102.62  Aligned_cols=98  Identities=18%  Similarity=0.372  Sum_probs=74.1

Q ss_pred             EEEEECCCCeeeEEEcCCcEEEEEECCEEee-cCCCCCceecCCCeEEEEEEEEEeeecCChHHHHHhhccccCceEEEE
Q 041440          111 TMKVKNPNENVAISYENDGDAFLLLKKKKLA-SGKFPQLEQEGGDSRNVRITLTGSNTVVPDEVSKSMHDKKTERAVSLQ  189 (237)
Q Consensus       111 tl~~~NPN~ki~i~Y~~~~~v~v~Y~g~~Lg-~g~~p~F~q~~~~tt~v~~~l~~~~~~l~~~~~~~L~~d~~~g~v~l~  189 (237)
                      ||+++|||. ++++| +++++.++|+|..+| .+..++|+|++++++.+.+.+..+...+    .+.+.++. +|..+++
T Consensus         1 ~l~v~NPN~-~~i~~-~~~~~~v~~~g~~v~~~~~~~~~~i~~~~~~~v~~~v~~~~~~l----~~~l~~~~-~~~~~~~   73 (101)
T PF03168_consen    1 TLSVRNPNS-FGIRY-DSIEYDVYYNGQRVGTGGSLPPFTIPARSSTTVPVPVSVDYSDL----PRLLKDLL-AGRVPFD   73 (101)
T ss_dssp             EEEEEESSS-S-EEE-EEEEEEEEESSSEEEEEEECE-EEESSSCEEEEEEEEEEEHHHH----HHHHHHHH-HTTSCEE
T ss_pred             CEEEECCCc-eeEEE-eCEEEEEEECCEEEECccccCCeEECCCCcEEEEEEEEEcHHHH----HHHHHhhh-ccccceE
Confidence            689999998 99999 999999999999999 7789999999999999999888775444    35555556 5677788


Q ss_pred             EEEEEEEEEEE-eeEEEcceeEEEEeE
Q 041440          190 LEMNLKGEMNI-GFLNLWSKDMHVVCD  215 (237)
Q Consensus       190 v~v~~~vr~kv-g~~~s~~~~v~V~C~  215 (237)
                      +.+++++++++ +.....+..+.++|+
T Consensus        74 v~~~~~g~~~v~~~~~~~~~~v~~~~~  100 (101)
T PF03168_consen   74 VTYRIRGTFKVLGTPIFGSVRVPVSCE  100 (101)
T ss_dssp             EEEEEEEEEE-EE-TTTSCEEEEEEEE
T ss_pred             EEEEEEEEEEEcccceeeeEEEeEEeE
Confidence            88888888884 443334445555554

The function of these proteins is unknown. ; PDB: 3BUT_A 1XO8_A 1YYC_A.

>smart00769 WHy Water Stress and Hypersensitive response

Probab=98.34  E-value=4.3e-06  Score=63.12  Aligned_cols=60  Identities=25%  Similarity=0.290  Sum_probs=54.4

Q ss_pred             CCceEEEEEEEECCCCeeeEEEcCCcEEEEEECCEEeecCCCC-CceecCCCeEEEEEEEEEe
Q 041440          104 SRPRYEFTMKVKNPNENVAISYENDGDAFLLLKKKKLASGKFP-QLEQEGGDSRNVRITLTGS  165 (237)
Q Consensus       104 ~s~~~~ltl~~~NPN~ki~i~Y~~~~~v~v~Y~g~~Lg~g~~p-~F~q~~~~tt~v~~~l~~~  165 (237)
                      ....+.+++++.|||. ..+.| ++++..++|+|..+|+|..+ .+..++++++.+.+.++.+
T Consensus        13 ~~~~~~l~l~v~NPN~-~~l~~-~~~~y~l~~~g~~v~~g~~~~~~~ipa~~~~~v~v~~~~~   73 (100)
T smart00769       13 LEIEIVLKVKVQNPNP-FPIPV-NGLSYDLYLNGVELGSGEIPDSGTLPGNGRTVLDVPVTVN   73 (100)
T ss_pred             eEEEEEEEEEEECCCC-Ccccc-ccEEEEEEECCEEEEEEEcCCCcEECCCCcEEEEEEEEee
Confidence            3678899999999996 79999 99999999999999999986 7999999999999988873

>COG5608 LEA14-like dessication related protein [Defense mechanisms]

Probab=97.62  E-value=0.0037  Score=50.69  Aligned_cols=81  Identities=16%  Similarity=0.155  Sum_probs=64.1

Q ss_pred             CCcEEEEEEEEEe--cCCCceEEEEEEEECCCCeeeEEEcCCcEEEEEECCEEeecCCC-CCceecCCCeEEEEEEEEEe
Q 041440           89 KGAILFIADVHVK--NQSRPRYEFTMKVKNPNENVAISYENDGDAFLLLKKKKLASGKF-PQLEQEGGDSRNVRITLTGS  165 (237)
Q Consensus        89 ~~P~fsV~s~~v~--~~~s~~~~ltl~~~NPN~ki~i~Y~~~~~v~v~Y~g~~Lg~g~~-p~F~q~~~~tt~v~~~l~~~  165 (237)
                      +.|...--.+...  .++..++-.+++++|||. ..+-- .+++..++-+|.++|+|.. .++..++++...+.+.+..+
T Consensus        31 ~~p~ve~~ka~wGkvt~s~~EiV~t~KiyNPN~-fPipV-tgl~y~vymN~Iki~eG~~~k~~~v~p~S~~tvdv~l~~d  108 (161)
T COG5608          31 KKPGVESMKAKWGKVTNSETEIVGTLKIYNPNP-FPIPV-TGLQYAVYMNDIKIGEGEILKGTTVPPNSRETVDVPLRLD  108 (161)
T ss_pred             CCCCceEEEEEEEEEeccceEEEEEEEecCCCC-cceee-eceEEEEEEcceEeeccccccceEECCCCeEEEEEEEEEe
Confidence            4565554444443  246779999999999996 68888 8899999999999999985 56999999999999998877


Q ss_pred             eecCCh
Q 041440          166 NTVVPD  171 (237)
Q Consensus       166 ~~~l~~  171 (237)
                      ...+.+
T Consensus       109 ~~~~ke  114 (161)
T COG5608         109 NSKIKE  114 (161)
T ss_pred             hHHHHH
Confidence            555543

>PF12751 Vac7: Vacuolar segregation subunit 7; InterPro: IPR024260 Vac7 is localised at the vacuole membrane, a location which is consistent with its involvement in vacuole morphology and inheritance []

Probab=97.48  E-value=0.00036  Score=64.20  Aligned_cols=85  Identities=19%  Similarity=0.317  Sum_probs=49.9

Q ss_pred             CCCceeehHHHHHHHHHHHHHHHHHHhheeeEEeecCCcEEEEEEEEEecC----CCceEEEEEEEECCCCeeeEEEcCC
Q 041440           53 RRNSCCTRVCWIILVLFVIGISIGITLVILHKVYSPKGAILFIADVHVKNQ----SRPRYEFTMKVKNPNENVAISYEND  128 (237)
Q Consensus        53 ~~~~CC~c~~~~~~~ll~liil~gi~~~il~lv~rP~~P~fsV~s~~v~~~----~s~~~~ltl~~~NPN~ki~i~Y~~~  128 (237)
                      ++++||..+..++++.+++++++|.++++++..-+|   --.|+=..|.+-    ...-||++|.|.|||. +.|.- ++
T Consensus       294 r~r~~~~r~~~c~~~~i~~lL~ig~~~gFv~AttKp---L~~v~v~~I~NVlaS~qELmfdl~V~A~NPn~-~~V~I-~d  368 (387)
T PF12751_consen  294 RQRSWFSRFASCIYLSILLLLVIGFAIGFVFATTKP---LTDVQVVSIQNVLASEQELMFDLTVEAFNPNW-FTVTI-DD  368 (387)
T ss_pred             ccccHHhhhhHHHHHHHHHHHHHHHHHHhhhhcCcc---cccceEEEeeeeeeccceEEEeeEEEEECCCe-EEEEe-cc
Confidence            345566543322222333344444444444444454   333333333332    2578999999999995 79998 89


Q ss_pred             cEEEEEECCEEeec
Q 041440          129 GDAFLLLKKKKLAS  142 (237)
Q Consensus       129 ~~v~v~Y~g~~Lg~  142 (237)
                      .++.|+-+..-++.
T Consensus       369 ~dldIFAKS~yvg~  382 (387)
T PF12751_consen  369 MDLDIFAKSRYVGT  382 (387)
T ss_pred             ceeeeEecCCccCc
Confidence            99999976655554

Vac7 has been shown to function as an upstream regulator of the Fab1 lipid kinase pathway []. The Fab1 lipid pathway is important for correct regulation of membrane trafficking events.

>PF07092 DUF1356: Protein of unknown function (DUF1356); InterPro: IPR009790 This family consists of several hypothetical mammalian proteins of around 250 residues in length

Probab=97.30  E-value=0.007  Score=52.63  Aligned_cols=57  Identities=19%  Similarity=0.243  Sum_probs=43.8

Q ss_pred             ceEEE--EEEEECCCCeeeEEEcCCcEEEEEECCEEeecCCCCC-ceecCCCeEEEEEEEEE
Q 041440          106 PRYEF--TMKVKNPNENVAISYENDGDAFLLLKKKKLASGKFPQ-LEQEGGDSRNVRITLTG  164 (237)
Q Consensus       106 ~~~~l--tl~~~NPN~ki~i~Y~~~~~v~v~Y~g~~Lg~g~~p~-F~q~~~~tt~v~~~l~~  164 (237)
                      ..+++  +|.+.||| ...+.- ..+++++.|....+|.+.... ...++++...+...+..
T Consensus       122 v~l~itn~lNIsN~N-Fy~V~V-t~~s~qv~~~~~VVG~~~~~~~~~I~Prs~~q~~~tV~t  181 (238)
T PF07092_consen  122 VQLNITNTLNISNPN-FYPVTV-TNLSIQVLYMKTVVGKGKNSNITVIGPRSSKQVNYTVKT  181 (238)
T ss_pred             EEEEEEEEEEccCCC-EEEEEE-EeEEEEEEEEEeEEeeeEecceEEecccCCceEEEEeeE
Confidence            44444  58999999 689998 889999999999999987654 46677777766665553

The function of this family is unknown.

>PLN03160 uncharacterized protein; Provisional

Probab=96.01  E-value=0.094  Score=45.22  Aligned_cols=98  Identities=14%  Similarity=0.196  Sum_probs=57.8

Q ss_pred             CCCCCceeehHHHHHHHHHHHHHHHHHHhheeeEEeecC--CcEEEEEEEEE----------ecC-------CCceEEEE
Q 041440           51 NKRRNSCCTRVCWIILVLFVIGISIGITLVILHKVYSPK--GAILFIADVHV----------KNQ-------SRPRYEFT  111 (237)
Q Consensus        51 ~~~~~~CC~c~~~~~~~ll~liil~gi~~~il~lv~rP~--~P~fsV~s~~v----------~~~-------~s~~~~lt  111 (237)
                      +|+...||+|++-+++++.+   +++++++.++--=.|+  .-.++|+++.+          +.+       -+++. +.
T Consensus        33 r~~~~~c~~~~~a~~l~l~~---v~~~l~~~vfrPk~P~~~v~~v~l~~~~~~~~~~~~~~~n~tl~~~v~v~NPN~-~~  108 (219)
T PLN03160         33 RRNCIKCCGCITATLLILAT---TILVLVFTVFRVKDPVIKMNGVTVTKLELINNTTLRPGTNITLIADVSVKNPNV-AS  108 (219)
T ss_pred             cccceEEHHHHHHHHHHHHH---HHHheeeEEEEccCCeEEEEEEEEeeeeeccCCCCceeEEEEEEEEEEEECCCc-ee
Confidence            68899999887777767733   2333333443334443  23333333321          111       15566 55


Q ss_pred             EEEECCCCeeeEEEcCCcEEEEEECCEEeecCCCCCceecCCCeEEEE
Q 041440          112 MKVKNPNENVAISYENDGDAFLLLKKKKLASGKFPQLEQEGGDSRNVR  159 (237)
Q Consensus       112 l~~~NPN~ki~i~Y~~~~~v~v~Y~g~~Lg~g~~p~F~q~~~~tt~v~  159 (237)
                      +.-+|  ..+.++| ++..+    +...+..|..++..+...+.+..-
T Consensus       109 ~~Y~~--~~~~v~Y-~g~~v----G~a~~p~g~~~ar~T~~l~~tv~~  149 (219)
T PLN03160        109 FKYSN--TTTTIYY-GGTVV----GEARTPPGKAKARRTMRMNVTVDI  149 (219)
T ss_pred             EEEcC--eEEEEEE-CCEEE----EEEEcCCcccCCCCeEEEEEEEEE
Confidence            66653  4588999 65433    446688888999888888888643

>PF14155 DUF4307: Domain of unknown function (DUF4307)

Probab=88.96  E-value=2.3  Score=32.79  Aligned_cols=68  Identities=15%  Similarity=0.148  Sum_probs=35.1

Q ss_pred             cCCcEEEEEEEEEecCCCceEEEEEEEEC-CCCeeeEEEcCCcEEEEEECCEEeecCC--CCCceecCCCeEEEEEEEEE
Q 041440           88 PKGAILFIADVHVKNQSRPRYEFTMKVKN-PNENVAISYENDGDAFLLLKKKKLASGK--FPQLEQEGGDSRNVRITLTG  164 (237)
Q Consensus        88 P~~P~fsV~s~~v~~~~s~~~~ltl~~~N-PN~ki~i~Y~~~~~v~v~Y~g~~Lg~g~--~p~F~q~~~~tt~v~~~l~~  164 (237)
                      ..+.+.++..+++.  ++.+.++++.+.- |..  ..+-   .--...|++..+|.-.  +|+   +...+..+.+.+..
T Consensus        31 ~~~v~~~~~gf~vv--~d~~v~v~f~Vtr~~~~--~a~C---~VrA~~~d~aeVGrreV~vp~---~~~~~~~~~v~v~T  100 (112)
T PF14155_consen   31 SPPVSAEVIGFEVV--DDSTVEVTFDVTRDPGR--PAVC---IVRALDYDGAEVGRREVLVPP---SGERTVRVTVTVRT  100 (112)
T ss_pred             CCCceEEEEEEEEC--CCCEEEEEEEEEECCCC--CEEE---EEEEEeCCCCEEEEEEEEECC---CCCcEEEEEEEEEe
Confidence            33444555555553  3345666666554 442  3333   1223347888888654  465   34444455555554


Q ss_pred             e
Q 041440          165 S  165 (237)
Q Consensus       165 ~  165 (237)
                      .
T Consensus       101 t  101 (112)
T PF14155_consen  101 T  101 (112)
T ss_pred             c
Confidence            4

>TIGR02588 conserved hypothetical protein TIGR02588

Probab=83.85  E-value=3  Score=32.77  Aligned_cols=52  Identities=19%  Similarity=0.158  Sum_probs=35.9

Q ss_pred             HHHHHHHHHHHhheee--EEeecCCcEEEEEEEEEecCCCceEEEEEEEECCCC
Q 041440           68 LFVIGISIGITLVILH--KVYSPKGAILFIADVHVKNQSRPRYEFTMKVKNPNE  119 (237)
Q Consensus        68 ll~liil~gi~~~il~--lv~rP~~P~fsV~s~~v~~~~s~~~~ltl~~~NPN~  119 (237)
                      .+.++++++++++++|  +.-+++.|.+++............|-+-++++|--.
T Consensus         9 ~Is~~ill~viglv~y~~l~~~~~pp~l~v~~~~~~r~~~gqyyVpF~V~N~gg   62 (122)
T TIGR02588         9 GISTLILAAMFGLVAYDWLRYSNKAAVLEVAPAEVERMQTGQYYVPFAIHNLGG   62 (122)
T ss_pred             HHHHHHHHHHHHHHHHHhhccCCCCCeEEEeehheeEEeCCEEEEEEEEEeCCC
Confidence            3455566667777765  555678999998887764333557888889998443

The function of this protein is unknown. It is always found as part of a two-gene operon with TIGR02587, a protein that appears to span the membrane seven times. It is found in Nostoc sp. PCC 7120, Agrobacterium tumefaciens, Sinorhizobium meliloti, and Gloeobacter violaceus, so far, all of which are bacterial.

>TIGR03602 streptolysinS bacteriocin protoxin, streptolysin S family

Probab=80.78  E-value=0.37  Score=31.65  Aligned_cols=6  Identities=33%  Similarity=1.171  Sum_probs=3.0

Q ss_pred             Cceeeh
Q 041440           55 NSCCTR   60 (237)
Q Consensus        55 ~~CC~c   60 (237)
                      .+||||
T Consensus        24 ggcccc   29 (56)
T TIGR03602        24 GGCCCC   29 (56)
T ss_pred             CCeEEE
Confidence            355544

Members of this family are bacteriocin precursors. These small, ribosomally produced polypeptide precursors are extensively processed post-translationally. This family belongs to a class of heterocycle-containing bacteriocins, including streptolysin S from Streptococcus pyogenes, and related bacteriocins from Streptococcus iniae and Clostridium botulinum. Streptolysin S is hemolytic. Bacteriocin genes in general are small and highly diverse, with odd sequence composition, and are easily missed by many gene-finding programs.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	237
1yyc_A	174	LEA protein, putative late embryogenesis abundant	98.23
3but_A	136	Uncharacterized protein AF_0446; lipid binding pro	98.04
1xo8_A	151	AT1G01470; structural genomics, protein structure	97.99

>1yyc_A LEA protein, putative late embryogenesis abundant protein; structural genomics, protein structure initiative, CESG; NMR {Arabidopsis thaliana}

Probab=98.23  E-value=1.5e-05  Score=65.24  Aligned_cols=101  Identities=20%  Similarity=0.243  Sum_probs=78.2

Q ss_pred             CCcEEEEEEEEEec--CCCceEEEEEEEECCCCeeeEEEcCCcEEEEEECCEEeecCCCCC-ceecCCCeEEEEEEEEEe
Q 041440           89 KGAILFIADVHVKN--QSRPRYEFTMKVKNPNENVAISYENDGDAFLLLKKKKLASGKFPQ-LEQEGGDSRNVRITLTGS  165 (237)
Q Consensus        89 ~~P~fsV~s~~v~~--~~s~~~~ltl~~~NPN~ki~i~Y~~~~~v~v~Y~g~~Lg~g~~p~-F~q~~~~tt~v~~~l~~~  165 (237)
                      +.|++++.++++..  .....|.++|+++|||. ..+-+ .+++..+.-+|..|++|..+. +..++++++.+.+.++..
T Consensus        43 ~~PeV~v~~v~~~~~~l~~~~~~l~LrV~NPN~-~pLpi-~gi~Y~L~vnG~~lasG~s~~~~tIpa~g~~~v~Vpv~v~  120 (174)
T 1yyc_A           43 PTPEATVDDVDFKGVTRDGVDYHAKVSVKNPYS-QSIPI-CQISYILKSATRTIASGTIPDPGSLVGSGTTVLDVPVKVA  120 (174)
T ss_dssp             CCCEEEEEEEEEEEECSSSEEEEEEEEEEECSS-SCCBC-CSEEEEEEESSSCEEEEEESCCCBCCSSEEEEEEEEEEES
T ss_pred             CCCEEEEEEeEEeccccceEEEEEEEEEECCCC-CCccc-cceEEEEEECCEEEEEEecCCCceECCCCcEEEEEEEEEE
Confidence            67999999999843  34788999999999996 79999 999999999999999999865 889999999999988764


Q ss_pred             eecCChHHHHHhhccc-cCceEEEEEEEEEEE
Q 041440          166 NTVVPDEVSKSMHDKK-TERAVSLQLEMNLKG  196 (237)
Q Consensus       166 ~~~l~~~~~~~L~~d~-~~g~v~l~v~v~~~v  196 (237)
                      -    ... .++..+. ..+.++.++++...+
T Consensus       121 ~----~~l-~~~~~~l~~~~~i~Y~L~g~L~i  147 (174)
T 1yyc_A          121 Y----SIA-VSLMKDMCTDWDIDYQLDIGLTF  147 (174)
T ss_dssp             H----HHH-HHTCCCCCSSEEECEEEEEEEEE
T ss_pred             H----HHH-HHHHHhcCCCCccceEEEEEEEe
Confidence            2    122 2333443 445566666654443

>3but_A Uncharacterized protein AF_0446; lipid binding protein, beta barrel, protein structure initia PSI-2; 1.91A {Archaeoglobus fulgidus dsm 4304}

Probab=98.04  E-value=3.8e-05  Score=60.37  Aligned_cols=74  Identities=15%  Similarity=0.153  Sum_probs=63.1

Q ss_pred             CCceEEEEEEEECCCCeeeEEEcCCcEEEEEECCEEeecCC-CCCceecCCCeEEEEEEEEEeeecCChHHHHHhhc
Q 041440          104 SRPRYEFTMKVKNPNENVAISYENDGDAFLLLKKKKLASGK-FPQLEQEGGDSRNVRITLTGSNTVVPDEVSKSMHD  179 (237)
Q Consensus       104 ~s~~~~ltl~~~NPN~ki~i~Y~~~~~v~v~Y~g~~Lg~g~-~p~F~q~~~~tt~v~~~l~~~~~~l~~~~~~~L~~  179 (237)
                      ....|.+.|++.|||. +.+.+ ++++..++.+|..+|+|. ...+..++.+++.+.+.+..+...+.+...+-+++
T Consensus        16 ~~t~~~~~l~V~NPN~-~~l~i-~gl~y~v~lng~~la~G~s~~~~~I~~~g~~~v~v~~~i~~~~l~~~~~~hi~n   90 (136)
T 3but_A           16 SQTEIVALAKVRNEDV-VPIVV-SGYHYTIEMNGVKVADGYENSPVTVKPASATTLKFSLRLNNSFLREWWVTHIAN   90 (136)
T ss_dssp             SEEEEEEEEEEECCSS-SCEEE-EEEEEEEEETTEEEEEEEECCCEEECTTCEEEEEEEEEEEHHHHTTHHHHHHHT
T ss_pred             cEEEEEEEEEEeCCCC-cceee-eceEEEEEECCEEEEeeeecCceEECCCCcEEEEEEEEEchHHhHHHHHHHhhc
Confidence            4688999999999996 79999 899999999999999998 57899999999999999988876676655555543

>1xo8_A AT1G01470; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, unknown function; NMR {Arabidopsis thaliana} SCOP: b.1.25.1

Probab=97.99  E-value=4.9e-06  Score=66.57  Aligned_cols=102  Identities=15%  Similarity=0.221  Sum_probs=76.6

Q ss_pred             CCcEEEEEEEEEecC--CCceEEEEEEEECCCCeeeEEEcCCcEEEEEECCEEeecCCCCC-ceecCCCeEEEEEEEEEe
Q 041440           89 KGAILFIADVHVKNQ--SRPRYEFTMKVKNPNENVAISYENDGDAFLLLKKKKLASGKFPQ-LEQEGGDSRNVRITLTGS  165 (237)
Q Consensus        89 ~~P~fsV~s~~v~~~--~s~~~~ltl~~~NPN~ki~i~Y~~~~~v~v~Y~g~~Lg~g~~p~-F~q~~~~tt~v~~~l~~~  165 (237)
                      +.|++++.++++...  ....|.++|+++|||. ..+.+ .+++..+.-+|..+++|..+. +..++++++.+.+.++..
T Consensus        20 ~~P~v~v~~v~~~~~~~~~~~~~~~l~V~NPN~-~~lpi-~gi~y~l~vng~~lasG~~~~~~~ipa~g~~~v~vpv~v~   97 (151)
T 1xo8_A           20 PKPEGSVTDVDLKDVNRDSVEYLAKVSVTNPYS-HSIPI-CEISFTFHSAGREIGKGKIPDPGSLKAKDMTALDIPVVVP   97 (151)
T ss_dssp             CSCCCBCSEEEECCCTTTEECEEEEEEEECSSS-SCCCC-EEEEEEEESSSSCEEEEEEEECCCCSSSSEEEEEECCCEE
T ss_pred             CCCEEEEEEeEEeccCcceeEEEEEEEEECCCC-CCccc-ccEEEEEEECCEEEEEEecCCCcEECCCCcEEEEEEEEEE
Confidence            679999999999532  4678999999999996 79999 889999999999999998864 888999999999887765


Q ss_pred             eecCChHHHHHhhccccCceEEEEEEEEEEE
Q 041440          166 NTVVPDEVSKSMHDKKTERAVSLQLEMNLKG  196 (237)
Q Consensus       166 ~~~l~~~~~~~L~~d~~~g~v~l~v~v~~~v  196 (237)
                      -..+- ..+..+   ...+.++.+++++..+
T Consensus        98 ~~~l~-~~~~~l---~~~~~i~Y~l~g~l~i  124 (151)
T 1xo8_A           98 YSILF-NLARDV---GVDWDIDYELQIGLTI  124 (151)
T ss_dssp             HHHHH-HHHHHH---HHHSEEEEEEEEEEEE
T ss_pred             HHHHH-HHHHhc---ccCCcccEEEEEEEEE
Confidence            32121 111222   2345677766665543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	237
d1xo8a_	151	Putative dessication related protein LEA14 {Thale	97.98

>d1xo8a_ b.1.25.1 (A:) Putative dessication related protein LEA14 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: LEA14-like
family: LEA14-like
domain: Putative dessication related protein LEA14
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.98  E-value=2.3e-06  Score=66.60  Aligned_cols=103  Identities=15%  Similarity=0.199  Sum_probs=76.3

Q ss_pred             ecCCcEEEEEEEEEecC--CCceEEEEEEEECCCCeeeEEEcCCcEEEEEECCEEeecCCCCC-ceecCCCeEEEEEEEE
Q 041440           87 SPKGAILFIADVHVKNQ--SRPRYEFTMKVKNPNENVAISYENDGDAFLLLKKKKLASGKFPQ-LEQEGGDSRNVRITLT  163 (237)
Q Consensus        87 rP~~P~fsV~s~~v~~~--~s~~~~ltl~~~NPN~ki~i~Y~~~~~v~v~Y~g~~Lg~g~~p~-F~q~~~~tt~v~~~l~  163 (237)
                      +=+.|++++.++++...  ....|.++++++|||. .++.. ++++..++.+|..+++|..+. +..++++++.+.+.++
T Consensus        18 ~~~kPev~l~~v~i~~v~~~~~~l~~~l~V~NPN~-~~l~i-~~l~y~l~~~g~~ia~G~~~~~~~ipa~~~~~v~vpv~   95 (151)
T d1xo8a_          18 AIPKPEGSVTDVDLKDVNRDSVEYLAKVSVTNPYS-HSIPI-CEISFTFHSAGREIGKGKIPDPGSLKAKDMTALDIPVV   95 (151)
T ss_dssp             CCCSCCCBCSEEEECCCTTTEECEEEEEEEECSSS-SCCCC-EEEEEEEESSSSCEEEEEEEECCCCSSSSEEEEEECCC
T ss_pred             CCCCCeEEEEEEEeeecccceEEEEEEEEEECCCC-Cceee-eeEEEEEEECCEEEEeEecCCCcEEcCCCcEEEEEEEE
Confidence            34679999999999643  4778999999999996 69998 889999999999999998754 7888999999998877


Q ss_pred             EeeecCChHHHHHhhcc-ccCceEEEEEEEEEEE
Q 041440          164 GSNTVVPDEVSKSMHDK-KTERAVSLQLEMNLKG  196 (237)
Q Consensus       164 ~~~~~l~~~~~~~L~~d-~~~g~v~l~v~v~~~v  196 (237)
                      ..-..+    .. +..+ .+.+.++.++++...+
T Consensus        96 v~~~~l----~~-~~~~i~~~~~i~Y~l~g~l~~  124 (151)
T d1xo8a_          96 VPYSIL----FN-LARDVGVDWDIDYELQIGLTI  124 (151)
T ss_dssp             EEHHHH----HH-HHHHHHHHSEEEEEEEEEEEE
T ss_pred             EEHHHH----HH-HHHhhccCCCccEEEEEEEEE
Confidence            543222    22 2223 2344565555444443