Citrus Sinensis ID: 041601

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850----

MDEDQEMEKFGMDNDFEGGQWINGEFYYKKRRAKPTQTKDDVLYGVFADDSDEDDDDDRDFGRKADLTKPVNFVSTGTVMPEQEIDKNVKEENVDMFEDDDSGNRSGVGLGFGSGNPASASGLGFSASNSKKSDNGVKVSDEACDGDDSFLQTPFGRRIKEEAQRKEKEREREKEREKLRSEKRTQGGKGGDIGVGNVVMKMMEKMGWYKGRGLGKDEQGITAPIEARLRPKNMGMGYNDFKETEAAKLPGLEKLEDKKTVGQQQPKGRNKERLWSKLKVKKKEEYITAEELLENKREQVVQKVIDMRGPQVRVLTNLENLDAEEKARENDVPMPELQHNVRLIVDLAEVDIQKIDKDLNNARETALSLQKEKENLEKTAAEQKQQLDNMETIVNVLGQIEKGHTLGTLTLVSLANYFSDLHKRFANDYKLCNLASIACSFALPLFIRMFQGWDPLQNPSHKMEVVLMWKNVLQTDDSQDIWDLSTPYSQLISEVVLPAVRIAGINTWDPRDPEQMLRFLESWEKLLPSSVLHTILDTVVLPKLTSAVDSWDPRRETVPIHVWVHPWLPLLGHKLEGLYQMIRMKLSNVLDAWHPSDASAYTILSPWKTVFDSASWEQLMRRYIVPKFQINPLEQKLDQFNWVMPWASAVPTHLMVDLMERFFFTKWLHVLYHWLNTAPDFEEIHRWYLGWKGLIPEELLANQNIRAQLNVGLDMMSQAAEGGIVVQPGTVENISYLKAREQRQFEAQQKAAAQAQQAAAAAAGLGSATQMNGMDGRQMTLKEVIEAYAQQHELLFKPKPGRMHNGQQIYGFGNISIYVDSLNQMLYAQKPEGWTPVTLDTLLKMHHNSLTRRR

cccHHHHHHccccccccccccccccccccccccccccccHHHHcccccccccccccccccccccccccccccccccccccccccccHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHcccccccccccccccccccEEEEEccccccccccccccHHHHcccccHHHHHHHccccccccccHHHHHHHHHHHccccccccHHHHHHHHHcccccEEEEccccccccccccccccHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHccccccccccccccEEEEccHHHHcccHHHHHHHHHHHHHHHccccccccccHHHcccHHHHHccHHHHHHHHHHHcccccEEcccccccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHcccEEEEccccccccccccEEccEEEEEEccccEEEEccccccccccHHHHHHHHHHcccccc

ccccHHHcEEcccccccccEEcccccccccccccccccHHHHEEEEEcccccccccccccccccccccccEEEEEcccEccccccccccHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHccccccccccccccccEEEEEEEEccccEEEEEcccccccHcccccccHHHHHHHHHHccccHcccccccccccccEcEEEccHHHHHHcccccccEEEEEccccccEEEccHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHcHHHHHHccHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHccccHHHHHHHHHccccccEcccHcccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHccHHHHHcHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccHHccccccccccccccccccccccccccccccccHHHHHHHHHHHcccEEEEcccccccccEEEEEEEEEEEEEcccEEEEEEccccEEEccHHHHHHHHHHcccccc

MDEDQEmekfgmdndfeggqwingefyykkrrakptqtkddvlygvfaddsdedddddrdfgrkadltkpvnfvstgtvmpeqeidknvkeenvdmfedddsgnrsgvglgfgsgnpasasglgfsasnskksdngvkvsdeacdgddsflqtpfgRRIKEEAQRKEKEREREKEREKLRSEkrtqggkggdigVGNVVMKMMEKMGwykgrglgkdeqgitapiearlrpknmgmgyndfketeaaklpglekledkktvgqqqpkgrnkeRLWSKLKVKKKEEYITAEELLENKREQVVQKVIDMRGPQVRVLTnlenldaeekarendvpmpelqHNVRLIVDLAEVDIQKIDKDLNNARETALSLQKEKENLEKTAAEQKQQLDNMETIVNVLGQiekghtlgTLTLVSLANYFSDLHKRFANDYKLCNLASIACSFALPLFIRMfqgwdplqnpshkMEVVLMWKNVlqtddsqdiwdlstpysqlISEVVLPAVRiagintwdprdpEQMLRFLESWEKLLPSSVLHtildtvvlpkltsavdswdprretvpihvwvhpwlpllghkLEGLYQMIRMKLSNvldawhpsdasaytilspwktvfdsASWEQLMRRYivpkfqinpleqkldqfnwvmpwasavPTHLMVDLMERFFFTKWLHVLYHWLNTAPDFEEIHRWYLgwkglipeeLLANQNIRAQLNVGLDMMSQaaeggivvqpgtvENISYLKAREQRQFEAQQKAAAQAQQAAAAAAGlgsatqmngmdgrQMTLKEVIEAYAQQHELlfkpkpgrmhngqqiygfGNISIYVDSLNQMLyaqkpegwtpvTLDTLLKMHHNSLTRRR

MDEDQEMEKfgmdndfeggqWINGEFYYKkrrakptqtkddvlygvfaddsdedddDDRDfgrkadltkpvnfvstgtvmpeqeidknvkEENVDMFEDDDSGNRSGVGLGFGSGNPASASGLGFSASNSKKSDNGVKVsdeacdgddsflqtpfgrrikeeaqrkekererekereklrsekrtqggkggdigvgnVVMKMMEKMGWYkgrglgkdeqgitapiearlrpknMGMGYNDFKETEAAklpglekledkktvgqqqpkgrnkerlwsklkvkkkeeYITAeellenkreqvvqkvidmrgpqvrvltnlenldaeekarendvpmpelQHNVRLIVDLAEVDIQKIDKDLNNARETALSLQKEKENLEKTAAEQKQQLDNMETIVNVLGQIEKGHTLGTLTLVSLANYFSDLHKRFANDYKLCNLASIACSFALPLFIRMFQGWDPLQNPSHKMEVVLMWKNVLQTDDSQDIWDLSTPYSQLISEVVLPAVRIAGINTWDPRDPEQMLRFLESWEKLLPSSVLHTildtvvlpkltsavdswdprrETVPIHVWVHPWLPLLGHKLEGLYQMIRMKLSNVLDAWHPSDASAYTILSPWKTVFDSASWEQLMRRYIVPKFQINPLEQKLDQFNWVMPWASAVPTHLMVDLMERFFFTKWLHVLYHWLNTAPDFEEIHRWYLGWKGLIPEELLANQNIRAQLNVGLDMMSQAAEGGIVVQPGTVENISYLKAREQRQFEAQQKAAAQAQQAAAAAAGLGSATQMNGMDGRQMTLKEVIEAYAQQHELLFKPKPGRMHNGQQIYGFGNISIYVDSLNQMLYAQKPEGWTPVTLDTLLKMHHNSLTRRR

MDEDQEMEKFGMDNDFEGGQWINGEFYYKKRRAKPTQTKDDVLYGVFAddsdedddddrdFGRKADLTKPVNFVSTGTVMPEQEIDKNVKEENVDMFEDDDSGNRSGVGLGFGSGNPASASGLGFSASNSKKSDNGVKVSDEACDGDDSFLQTPFGrrikeeaqrkekererekereklrsekrTQggkggdigvgnvvMKMMEKMGWYKGRGLGKDEQGITAPIEARLRPKNMGMGYNDFKETEAAKLPGLEKLEDKKTVGQQQPKGRNKERLWSKLKVKKKEEYITAEELLENKREQVVQKVIDMRGPQVRVLTNLENLDAEEKARENDVPMPELQHNVRLIVDLAEVDIQKIDKDLNNARETALSLQKEKENLEKTAAEQKQQLDNMETIVNVLGQIEKGHTLGTLTLVSLANYFSDLHKRFANDYKLCNLASIACSFALPLFIRMFQGWDPLQNPSHKMEVVLMWKNVLQTDDSQDIWDLSTPYSQLISEVVLPAVRIAGINTWDPRDPEQMLRFLESWEKLLPSSVLHTILDTVVLPKLTSAVDSWDPRRETVPIHVWVHPWLPLLGHKLEGLYQMIRMKLSNVLDAWHPSDASAYTILSPWKTVFDSASWEQLMRRYIVPKFQINPLEQKLDQFNWVMPWASAVPTHLMVDLMERFFFTKWLHVLYHWLNTAPDFEEIHRWYLGWKGLIPEELLANQNIRAQLNVGLDMMSQAAEGGIVVQPGTVENISYLkareqrqfeaqqkaaaqaqqaaaaaaGLGSATQMNGMDGRQMTLKEVIEAYAQQHELLFKPKPGRMHNGQQIYGFGNISIYVDSLNQMLYAQKPEGWTPVTLDTLLKMHHNSLTRRR

***************FEGGQWINGEFYYKKR**********VLYG***************************************************************************************************************************************************IGVGNVVMKMMEKMGWYKGRGLG**********************************************************************YITAEELL****EQVVQKVIDMRGPQVRVLTN********************QHNVRLIVDLAEVDIQKID**********************************ETIVNVLGQIEKGHTLGTLTLVSLANYFSDLHKRFANDYKLCNLASIACSFALPLFIRMFQGWDPLQNPSHKMEVVLMWKNVLQTDDSQDIWDLSTPYSQLISEVVLPAVRIAGINTWDPRDPEQMLRFLESWEKLLPSSVLHTILDTVVLPKLTSAVDSWDPRRETVPIHVWVHPWLPLLGHKLEGLYQMIRMKLSNVLDAWHPSDASAYTILSPWKTVFDSASWEQLMRRYIVPKFQINPLEQKLDQFNWVMPWASAVPTHLMVDLMERFFFTKWLHVLYHWLNTAPDFEEIHRWYLGWKGLIPEELLANQNIRAQLNVGLDMMSQAAEGGIVVQPGTVENISYL*******************************************LKEVIEAYAQQHELLFKPKPGRMHNGQQIYGFGNISIYVDSLNQMLYAQKPEGWTPVTLDTLLKM*********

*****EMEKFGMDNDFEGGQWING********************************************************************************************************************************************************************************KMMEKMGWY**********GITAPIE****************************************************************************************************************HNVRLIV****************************************QLDNMETIVNVLGQIEKGHTLGTLTLVSLANYFSDLHKRFANDYKLCNLASIACSFALPLFIRMFQGWDPLQNPSHKMEVVLMWKNVLQTD*****WDLSTPYSQLISEVVLPAVRIAGINTWDPRDPEQMLRFLESWEKLLPSSVLHTILDTVVLPKLTSAVDSWDPRRETVPIHVWVHPWLPLLGHKLEGLYQMIRMKLSNVLDAWHPSDASAYTILSPWKTVFDSASWEQLMRRYIVPKFQINPLEQKLDQFNWVMPWASAVPTHLMVDLMERFFFTKWLHVLYHWLNTAPDFEEIHRWYLGWKGLIPEELLANQNIRAQLNVGLDMMSQAAEGG*********************************************************LKEVIEAYAQQHELLFKPKPGR*HNGQQIYGFGNISIYVDSLNQMLYAQKPEGWTPVTLDTLLK**********

********KFGMDNDFEGGQWINGEFYYKKRRAKPTQTKDDVLYGVFADDSDEDDDDDRDFGRKADLTKPVNFVSTGTVMPEQEIDKNVKEENVDMFEDDDSGNRSGVGLGFGSGNPASASGLGFS************VSDEACDGDDSFLQTPFGRRIKE***************************KGGDIGVGNVVMKMMEKMGWYKGRGLGKDEQGITAPIEARLRPKNMGMGYNDFKETEAAKLPGLEKLED**************ERLWSKLKVKKKEEYITAEELLENKREQVVQKVIDMRGPQVRVLTNLENLDAEEKARENDVPMPELQHNVRLIVDLAEVDIQKIDKDLNNARETALSLQKEKENLEKTAAEQKQQLDNMETIVNVLGQIEKGHTLGTLTLVSLANYFSDLHKRFANDYKLCNLASIACSFALPLFIRMFQGWDPLQNPSHKMEVVLMWKNVLQTDDSQDIWDLSTPYSQLISEVVLPAVRIAGINTWDPRDPEQMLRFLESWEKLLPSSVLHTILDTVVLPKLTSAVDSWDPRRETVPIHVWVHPWLPLLGHKLEGLYQMIRMKLSNVLDAWHPSDASAYTILSPWKTVFDSASWEQLMRRYIVPKFQINPLEQKLDQFNWVMPWASAVPTHLMVDLMERFFFTKWLHVLYHWLNTAPDFEEIHRWYLGWKGLIPEELLANQNIRAQLNVGLDMMSQAAEGGIVVQPGTVENISYLKAREQR***********************SATQMNGMDGRQMTLKEVIEAYAQQHELLFKPKPGRMHNGQQIYGFGNISIYVDSLNQMLYAQKPEGWTPVTLDTLLKMHHNSLTRRR

*****EMEKFGMDNDFEGGQWINGEFYYKKRRAKPTQTKDDVLYGVFADD***************DLTKPVNFVSTGTVM******************************************************************************************************************VGNVVMKMMEKMGWYKGRGLGKDEQGITAPIEARLRPKNMGMGYNDFK************************************KVKKKEEYITAEELLENKREQVVQKVIDMRGPQVRVLTNLENLDAEEKARENDVPMPELQHNVRLIVDLAEVDIQKIDKDLNNARETALSLQKEKENLEKTAAEQKQQLDNMETIVNVLGQIEKGHTLGTLTLVSLANYFSDLHKRFANDYKLCNLASIACSFALPLFIRMFQGWDPLQNPSHKMEVVLMWKNVLQTDDSQDIWDLSTPYSQLISEVVLPAVRIAGINTWDPRDPEQMLRFLESWEKLLPSSVLHTILDTVVLPKLTSAVDSWDPRRETVPIHVWVHPWLPLLGHKLEGLYQMIRMKLSNVLDAWHPSDASAYTILSPWKTVFDSASWEQLMRRYIVPKFQINPLEQKLDQFNWVMPWASAVPTHLMVDLMERFFFTKWLHVLYHWLNTAPDFEEIHRWYLGWKGLIPEELLANQNIRAQLNVGLDMMSQAAEGGIVV***************************************************QMTLKEVIEAYAQQHELLFKPKPGRMHNGQQIYGFGNISIYVDSLNQMLYAQKPEGWTPVTLDTLLKMHHNS*****

oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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MDEDQEMEKFGMDNDFEGGQWINGEFYYKKRRAKPTQTKDDVLYGVFADDSDEDDDDDRDFGRKADLTKPVNFVSTGTVMPEQEIDKNVKEENVDMFEDDDSGNRSGVGLGFGSGNPASASGLGFSASNSKKSDNGVKVSDEACDGDDSFLQTPFxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxQGGKGGDIGVGNVVMKMMEKMGWYKGRGLGKDEQGITAPIEARLRPKNMGMGYNDFKETEAAKLPGLEKLEDKKTVGQQQPKGRNKERLWSKLxxxxxxxxxxxxxxxxxxxxxVVQKVIDMRGPQVRVLTNLENLDAEEKARENDVPMPELQHNVRLIxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxVNVLGQIEKGHTLGTLTLVSLANYFSDLHKRFANDYKLCNLASIACSFALPLFIRMFQGWDPLQNPSHKMEVVLMWKNVLQTDDSQDIWDLSTPYSQLISEVVLPAVRIAGINTWDPRDPEQMLRFLESWEKLLPSSVLHTILDTVVLPKLTSAVDSWDPRRETVPIHVWVHPWLPLLGHKLEGLYQMIRMKLSNVLDAWHPSDASAYTILSPWKTVFDSASWEQLMRRYIVPKFQINPLEQKLDQFNWVMPWASAVPTHLMVDLMERFFFTKWLHVLYHWLNTAPDFEEIHRWYLGWKGLIPEELLANQNIRAQLNVGLDMMSQAAEGGIVVQPGTVENISYLxxxxxxxxxxxxxxxxxxxxxAAAAAGLGSATQMNGMDGRQMTLKEVIEAYAQQHELLFKPKPGRMHNGQQIYGFGNISIYVDSLNQMLYAQKPEGWTPVTLDTLLKMHHNSLTRRR

no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		854	2.2.26 [Sep-21-2011]
Q9ERA6		838	Tuftelin-interacting prot	yes	no	0.888	0.905	0.324	1e-115
Q5U2Y6		837	Tuftelin-interacting prot	yes	no	0.896	0.915	0.324	1e-115
Q66J74		824	Tuftelin-interacting prot	N/A	no	0.886	0.918	0.321	1e-115
A1XD94		837	Tuftelin-interacting prot	yes	no	0.888	0.906	0.322	1e-114
A1XD93		837	Tuftelin-interacting prot	yes	no	0.881	0.899	0.319	1e-114
Q9UBB9		837	Tuftelin-interacting prot	yes	no	0.881	0.899	0.319	1e-114
A1XD95		837	Tuftelin-interacting prot	N/A	no	0.888	0.906	0.319	1e-114
Q06AK6		836	Tuftelin-interacting prot	yes	no	0.892	0.911	0.315	1e-113
A1XD97		837	Tuftelin-interacting prot	yes	no	0.889	0.908	0.318	1e-113
Q5R5K8		837	Tuftelin-interacting prot	yes	no	0.881	0.899	0.318	1e-113

>sp\|Q9ERA6\|TFP11_MOUSE Tuftelin-interacting protein 11 OS=Mus musculus GN=Tfip11 PE=1 SV=1	Back alignment and function desciption

 Score =  417 bits (1073), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 287/885 (32%), Positives = 450/885 (50%), Gaps = 126/885 (14%)

Query: 15  DFEGGQW-INGEFYYKKRRAKPTQTKDDVLYGVFADDSDEDDDDDR-DFG--RKADLTKP 70
           +FE   W +  EF     R +  QTK++  YGV+A+    D D++R  FG  R  D + P
Sbjct: 24  NFEITDWDLQNEF--NPNRQRHWQTKEEATYGVWAE---RDSDEERPSFGGKRARDYSAP 78

Query: 71  VNFVSTGTVMPEQEIDKNVKEENVDMFEDDDSGNRSGVGLGFGSGNPASASGLGFSASNS 130
           VNF+S G       + K   EE     ED D+  +      F           G +   S
Sbjct: 79  VNFISAG-------LKKGAAEEADS--EDSDAEEKPVKQEDFPKDLGPKKLKTGGNFKPS 129

Query: 131 KKSDNGVKVSDEACDGDDSFLQTPFGRRIKEEAQRKEKEREREKEREKLRSEKRTQGGKG 190
           +K  +G         G  SF+   FG                         E+ T+G   
Sbjct: 130 QKGFSG---------GTKSFMD--FGSW-----------------------ERHTKG--- 152

Query: 191 GDIGVGNVVMKMMEKMGWYKGRGLGKDEQGITAPIEARLRPKNMGMG-YNDFKETEAAK- 248
                  +  K+++KMG+  GRGLGK+ QGI  PIEA+ R     +G Y   + T++ + 
Sbjct: 153 -------IGQKLLQKMGYVPGRGLGKNAQGIINPIEAKQRKGKGAVGAYGSERTTQSLQD 205

Query: 249 LPGLEKLEDKKTVGQQQ-------PKGRNKERLWSKLKVKK-KEEYITAEELLENKREQV 300
            P  +  E+ +   Q++       P G  K+  +S   V++ K +   +++L   ++E  
Sbjct: 206 FPVADSEEEAEEEFQKELSQWRKDPSGSKKKPKYSYKTVEELKAKGRVSKKLTAPQKELS 265

Query: 301 VQKVIDMRGPQVRVLTNLENLDAEEKARENDVPM-------------------PELQHNV 341
             KVIDM G + +V  +   +  +    +  VP+                   PEL+HN+
Sbjct: 266 QVKVIDMTGREQKVYYSYSQISHKHSVPDEGVPLLAQLPPTAGKEARMPGFALPELEHNL 325

Query: 342 RLIVDLAEVDIQKIDKDLNNARETALSLQKEKENLEKTAAEQKQQLDNMETIVNVLGQIE 401
           +L+++  E +I + D+ L   R+  +SL  E E   +  A +++ + N+  ++ ++ + E
Sbjct: 326 QLLIERTEQEIIQSDRQLQYERDMVVSLSHELEKTAEVLAHEERVISNLSKVLALVEECE 385

Query: 402 K---GHTLGTLTLVSLANYFSDLHKRFANDYKLCNLASIACSFALPLFIRMFQGWDPLQN 458
           +    H    LTL   A  F  L  ++  +Y+L + A +A +   PL    F+ W PL++
Sbjct: 386 RRMQPHGADPLTLDECARIFETLQDKYYEEYRLADRADLAVAIVYPLVKDYFKDWHPLED 445

Query: 459 PSHKMEVVLMWKNVLQTDD--SQDIWDLST-PYSQLISEVVLPAVRIAGINTWDPRDPEQ 515
            S+  +++  WK++L+ D   S    DLS+  + +L+ EV +P VR   +  W PR+ E 
Sbjct: 446 GSYGTQIISKWKSLLENDQLLSHSSQDLSSDAFHRLMWEVWMPFVRNV-VAQWQPRNCEP 504

Query: 516 MLRFLESWEKLLPSSVLHTILDTVVLPKLTSAVDSWDPRRETVPIHVWVHPWLPLLGHKL 575
           M+ FL+SW  ++P  +L  ILD ++ PKL   VD+W+P  +TVPIH W+HPWLPL+  +L
Sbjct: 505 MVDFLDSWAHIIPVWILDNILDQLIFPKLQKEVDNWNPLTDTVPIHSWIHPWLPLMQARL 564

Query: 576 EGLYQMIRMKLSNVLDAWHPSDASAYTILSPWKTVFDSASWEQLMRRYIVPKFQ------ 629
           E LY  +R KLS+ L  WHPSDASA  IL PWK V    SWE  M R IVPK        
Sbjct: 565 EPLYSPVRSKLSSALQKWHPSDASAKLILQPWKEVLTPGSWEAFMLRNIVPKLGMCLGEL 624

Query: 630 -INPLEQKLDQFNWVMPWASAVPTHLMVDLMERFFFTKWLHVLYHWLNTAPDFEEIHRWY 688
            INP +Q +D F WVM W   +    +V L+E+ FF KWL VL  WL+ +P++EEI +WY
Sbjct: 625 VINPHQQHMDAFYWVMDWEGMISVSSLVGLLEKHFFPKWLQVLCSWLSNSPNYEEITKWY 684

Query: 689 LGWKGLIPEELLANQNIRAQLNVGLDMMSQAAEG--GIVVQPGTVENISYLKAREQR--- 743
           LGWK +  +++LA+ +++ + N  LD+M++A     G  +QPG  ENI+YL   E+R   
Sbjct: 685 LGWKSMFSDQVLAHPSVKDKFNEALDIMNRAVSSNVGAYMQPGARENIAYLTHTERRKDF 744

Query: 744 QFEAQQ---KAAAQAQQAAAAAAGLGSATQMNGMDGRQMTLKEVIEAYAQQHELLFKPKP 800
           Q+EA Q   +A   AQ+    AA   S+  MN         K++IE  A++H ++F P  
Sbjct: 745 QYEAMQERREAENMAQRGIGVAA---SSVPMN--------FKDLIETKAEEHNIVFMPVI 793

Query: 801 GRMHNGQQIYGFGNISIYVDSLNQMLYAQKPEGWTPVTLDTLLKM 845
           G+ H G+Q+Y FG I IY+D    +++ Q  + W P +L +L+ M
Sbjct: 794 GKRHEGKQLYTFGRIVIYID--RGVVFVQGEKTWVPTSLQSLIDM 836

May play a role in the differentiation of ameloblasts and odontoblasts or in the forming of the enamel extracellular matrix. May also be involved in pre-mRNA splicing.
Mus musculus (taxid: 10090)

>sp\|Q5U2Y6\|TFP11_RAT Tuftelin-interacting protein 11 OS=Rattus norvegicus GN=Tfip11 PE=2 SV=1	Back alignment and function description

>sp\|Q66J74\|TFP11_XENLA Tuftelin-interacting protein 11 OS=Xenopus laevis GN=tfip11 PE=2 SV=1	Back alignment and function description

>sp\|A1XD94\|TFP11_MACMU Tuftelin-interacting protein 11 OS=Macaca mulatta GN=TFIP11 PE=2 SV=1	Back alignment and function description

>sp\|A1XD93\|TFP11_PANTR Tuftelin-interacting protein 11 OS=Pan troglodytes GN=TFIP11 PE=2 SV=1	Back alignment and function description

>sp\|Q9UBB9\|TFP11_HUMAN Tuftelin-interacting protein 11 OS=Homo sapiens GN=TFIP11 PE=1 SV=1	Back alignment and function description

>sp\|A1XD95\|TFP11_MACFA Tuftelin-interacting protein 11 OS=Macaca fascicularis GN=TFIP11 PE=2 SV=1	Back alignment and function description

>sp\|Q06AK6\|TFP11_PIG Tuftelin-interacting protein 11 OS=Sus scrofa GN=TFIP11 PE=2 SV=1	Back alignment and function description

>sp\|A1XD97\|TFP11_CANFA Tuftelin-interacting protein 11 OS=Canis familiaris GN=TFIP11 PE=2 SV=1	Back alignment and function description

>sp\|Q5R5K8\|TFP11_PONAB Tuftelin-interacting protein 11 OS=Pongo abelii GN=TFIP11 PE=2 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		854
224126163		845	predicted protein [Populus trichocarpa]	0.956	0.966	0.632	0.0
225454601		852	PREDICTED: tuftelin-interacting protein	0.966	0.968	0.643	0.0
255566080		883	tuftelin interacting protein, putative [	0.989	0.956	0.637	0.0
449514938		872	PREDICTED: LOW QUALITY PROTEIN: tuftelin	0.978	0.958	0.628	0.0
449468289		871	PREDICTED: tuftelin-interacting protein	0.977	0.958	0.628	0.0
356559565		862	PREDICTED: tuftelin-interacting protein	0.976	0.967	0.634	0.0
297844642		849	D111/G-patch domain-containing protein [	0.944	0.950	0.574	0.0
15220011		849	tuftelin-interacting protein 11 [Arabido	0.943	0.949	0.562	0.0
224144895		690	predicted protein [Populus trichocarpa]	0.772	0.956	0.653	0.0
297737221		739	unnamed protein product [Vitis vinifera]	0.718	0.830	0.624	0.0

>gi\|224126163\|ref\|XP_002319771.1\| predicted protein [Populus trichocarpa] gi\|222858147\|gb\|EEE95694.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

 Score = 1081 bits (2795), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 556/879 (63%), Positives = 676/879 (76%), Gaps = 62/879 (7%)

Query: 2   DEDQEMEKFGMDNDFEGGQWINGEFYYKKRRAKPTQTKDDVLYGVFADDSDEDDDDD--- 58
           D  +EME+FGM+NDFE G++INGEFY+KK++ K  Q+KDDVLYG+FAD   +DD      
Sbjct: 3   DYQEEMERFGMENDFEDGRYINGEFYFKKQKEKRKQSKDDVLYGIFADYDSDDDYVSSSR 62

Query: 59  --RDFGRKADLTKPVNFVSTGTVMPEQEIDKNVKEENVDMFEDDDSGNRSGVGLGFGSGN 116
             R   RKADLTKPVNFVSTGTVMP QEIDKN++++N D+       NR G+G GF +G 
Sbjct: 63  KRRKDSRKADLTKPVNFVSTGTVMPNQEIDKNLRDKNSDVMFAAADDNRPGIGSGFNTG- 121

Query: 117 PASASGLGFSASNSKKSDNGVKVSDEACDGDDSFLQTPFGRRIKEEAQRKEKEREREKER 176
                 LGF++                  G D+FL T FGRRIKE A+R+E+ER  EK+ 
Sbjct: 122 ------LGFNS------------------GLDNFLPTEFGRRIKEGAERREQER-MEKKA 156

Query: 177 EKLRSEKRTQGGKGGDIGV------GNVVMKMMEKMGWYKGRGLGKDEQGITAPIEARLR 230
           + +   K     K GD+GV        + MK++EKMG YKG GLGK++QGI APIEA++R
Sbjct: 157 KGVGKNKEV---KDGDVGVFEKHTVKGIGMKLLEKMG-YKGGGLGKNQQGIVAPIEAKMR 212

Query: 231 PKNMGMGYNDFKETEAAKLPGLEKLEDKKTVGQQQPK--GR-NKERLWSKLKVKKKEEYI 287
           PKNMGMG+NDFKET +AKLP   + E+K+ V Q Q +  GR  ++      K +K+E+YI
Sbjct: 213 PKNMGMGFNDFKET-SAKLP---QFEEKEAVSQSQGQMVGRMKEKLWLKGKKKQKQEKYI 268

Query: 288 TAEELLENKREQ---VVQKVIDMRGPQVRVLTNLENLDAEEKARENDVPMPELQHNVRLI 344
           TA+ELL  K EQ   V QKVIDMRGPQVRVLTNLENL+AEEKA+ENDV MPELQHNVRLI
Sbjct: 269 TADELLAKKEEQGFEVFQKVIDMRGPQVRVLTNLENLNAEEKAKENDVAMPELQHNVRLI 328

Query: 345 VDLAEVDIQKIDKDLNNARETALSLQKEKENLEKTAAEQKQQLDNMETIVNVLGQIEKGH 404
           VDLAE+DIQKID+DL N RETA+SLQ+EKE LE  AA QK+QLDN+E I+ VL  IE+  
Sbjct: 329 VDLAELDIQKIDRDLRNERETAMSLQQEKEKLETEAARQKKQLDNVEEIMGVLSHIEEQK 388

Query: 405 TLGTLTLVSLANYFSDLHKRFANDYKLCNLASIACSFALPLFIRMFQGWDPLQNPSHKME 464
           + GTLTL SLA YF+D+ ++FA DYKLCNL+ +ACS+ALPLFIR+FQGWDPL+NP H +E
Sbjct: 389 SSGTLTLDSLAKYFTDIKRKFAEDYKLCNLSCVACSYALPLFIRVFQGWDPLRNPLHGLE 448

Query: 465 VVLMWKNVLQTDDSQDIWDLSTPYSQLISEVVLPAVRIAGINTWDPRDPEQMLRFLESWE 524
           VV +WKNVLQ ++S DIWD   PY+QL++EVVLPAVRI+GINTW+PRDPE MLRFLESWE
Sbjct: 449 VVELWKNVLQGEESSDIWDEVAPYAQLVTEVVLPAVRISGINTWEPRDPEPMLRFLESWE 508

Query: 525 KLLPSSVLHTILDTVVLPKLTSAVDSWDPRRETVPIHVWVHPWLPLLGHKLEGLYQMIRM 584
            LLP++V+ +ILD +V+PKL+SAVDSWDPRRETVPIHVWVHPWL  LG KLEGLYQMIRM
Sbjct: 509 NLLPAAVVQSILDNIVMPKLSSAVDSWDPRRETVPIHVWVHPWLLQLGLKLEGLYQMIRM 568

Query: 585 KLSNVLDAWHPSDASAYTILSPWKTVFDSASWEQLMRRYIVPK-------FQINPLEQKL 637
           KLS VLDAWHPSDASAYTILSPWKTVFD+ASWE LMRR+IVPK       FQINP  QKL
Sbjct: 569 KLSMVLDAWHPSDASAYTILSPWKTVFDAASWENLMRRFIVPKLQVALQEFQINPANQKL 628

Query: 638 DQFNWVMPWASAVPTHLMVDLMERFFFTKWLHVLYHWLNTAPDFEEIHRWYLGWKGLIPE 697
           DQF WVM WASA+P HLMVDLMERFFF+KWL VLYHWL + P+ +E+H+WY+GWKGL+P+
Sbjct: 629 DQFYWVMSWASAIPIHLMVDLMERFFFSKWLQVLYHWLCSNPNLQEVHKWYIGWKGLLPQ 688

Query: 698 ELLANQNIRAQLNVGLDMMSQAAEGGIVVQPGTVENISYLKAREQRQFEAQQKAAAQAQQ 757
           EL A++NIR Q  +GL+M+ +A EG  VVQPG  EN+SY++A+EQRQFEAQQ+AA  +Q 
Sbjct: 689 ELQAHENIRYQFTLGLNMIDRAIEGMEVVQPGLRENLSYIRAQEQRQFEAQQRAAMHSQ- 747

Query: 758 AAAAAAGLGSATQMNGMDGR--QMTLKEVIEAYAQQHELLFKPKPGRMHNGQQIYGFGNI 815
               AAG+GS TQM G  G   +MTLKEV+EA+AQ H LLFKPKPGRMH+G QIYG+GN+
Sbjct: 748 -YQTAAGMGSTTQMGGFGGGAVEMTLKEVVEAHAQHHSLLFKPKPGRMHDGHQIYGYGNM 806

Query: 816 SIYVDSLNQMLYAQKPEGWTPVTLDTLLKMHHNSLTRRR 854
           SIYVD +++ LY QK E W    LD LL+MH+NSL +RR
Sbjct: 807 SIYVDPIHERLYVQKEEDWLLTNLDNLLEMHNNSLKKRR 845

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|225454601\|ref\|XP_002265002.1\| PREDICTED: tuftelin-interacting protein 11-like [Vitis vinifera]	Back alignment and taxonomy information

>gi\|255566080\|ref\|XP_002524028.1\| tuftelin interacting protein, putative [Ricinus communis] gi\|223536755\|gb\|EEF38396.1\| tuftelin interacting protein, putative [Ricinus communis]	Back alignment and taxonomy information

>gi\|449514938\|ref\|XP_004164520.1\| PREDICTED: LOW QUALITY PROTEIN: tuftelin-interacting protein 11-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|449468289\|ref\|XP_004151854.1\| PREDICTED: tuftelin-interacting protein 11-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|356559565\|ref\|XP_003548069.1\| PREDICTED: tuftelin-interacting protein 11-like [Glycine max]	Back alignment and taxonomy information

>gi\|297844642\|ref\|XP_002890202.1\| D111/G-patch domain-containing protein [Arabidopsis lyrata subsp. lyrata] gi\|297336044\|gb\|EFH66461.1\| D111/G-patch domain-containing protein [Arabidopsis lyrata subsp. lyrata]	Back alignment and taxonomy information

>gi\|15220011\|ref\|NP_173150.1\| tuftelin-interacting protein 11 [Arabidopsis thaliana] gi\|5734758\|gb\|AAD50023.1\|AC007651_18 Similar to tuftelin-interacting protein [Arabidopsis thaliana] gi\|332191416\|gb\|AEE29537.1\| tuftelin-interacting protein 11 [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|224144895\|ref\|XP_002325453.1\| predicted protein [Populus trichocarpa] gi\|222862328\|gb\|EEE99834.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|297737221\|emb\|CBI26422.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		854
TAIR\|locus:2020332		849	STIPL1 "SPLICEOSOMAL TIMEKEEPE	0.619	0.623	0.661	2.5e-247
TAIR\|locus:2053839		752	AT2G42330 [Arabidopsis thalian	0.740	0.840	0.558	2.3e-196
UNIPROTKB\|Q66J74		824	tfip11 "Tuftelin-interacting p	0.666	0.690	0.336	5.7e-115
UNIPROTKB\|Q29RR5		837	TFIP11 "Tuftelin-interacting p	0.600	0.612	0.354	1.9e-114
UNIPROTKB\|F1MR60		837	TFIP11 "Tuftelin-interacting p	0.600	0.612	0.354	5.1e-114
UNIPROTKB\|Q0IIX9		825	tfip11 "Tuftelin-interacting p	0.672	0.695	0.330	8.2e-114
MGI\|MGI:1930075		838	Tfip11 "tuftelin interacting p	0.675	0.688	0.345	5.8e-105
RGD\|1311449		837	Tfip11 "tuftelin interacting p	0.675	0.689	0.342	6.5e-104
UNIPROTKB\|A1XD95		837	TFIP11 "Tuftelin-interacting p	0.670	0.684	0.336	7.4e-103
UNIPROTKB\|Q9UBB9		837	TFIP11 "Tuftelin-interacting p	0.670	0.684	0.336	9.5e-103

TAIR\|locus:2020332 STIPL1 "SPLICEOSOMAL TIMEKEEPER LOCUS1" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 1864 (661.2 bits), Expect = 2.5e-247, Sum P(3) = 2.5e-247
 Identities = 364/550 (66%), Positives = 429/550 (78%)

Query:   200 MKMMEKMGWYKGRGLGKDEQGITAPIEARLRPKNMGMGYNDFKETEAAKLPGLEKLEDKK 259
             MK++EKMG YKG GLGK++QGI APIEA+LRPKNMGMGYNDFKE   AKLP L+K+E+KK
Sbjct:   205 MKLLEKMG-YKGGGLGKNQQGIVAPIEAQLRPKNMGMGYNDFKE---AKLPDLKKVEEKK 260

Query:   260 TVG-----QQQPKG-RNKERLWSKLKVKKKEEYITAEELLENKREQVV---QKVIDMRGP 310
              +G      +Q  G R  + LW K KV+K   Y+TAEELLE K+E      Q +IDMRGP
Sbjct:   261 IIGVSVSENEQSHGDRGGKNLWKKKKVRKAV-YVTAEELLEKKQEAGFGGGQTIIDMRGP 319

Query:   311 QVRVLTNLENLDAEEKARENDVPMPELQHNVRLIVDLAEVDIQKIDKDLNNARETALSLQ 370
             QVRV+TNLENLDAEEKA+E DVPMPELQHN+RLIVDL E +IQKID+DL N RE+ALSLQ
Sbjct:   320 QVRVVTNLENLDAEEKAKEADVPMPELQHNLRLIVDLVEHEIQKIDRDLRNERESALSLQ 379

Query:   371 KEKENLEKTAAEQKQQLDNMETIVNVLGQIEKGHTLGTLTLVSLANYFSDLHKRFANDYK 430
             +EKE L     +QK+ L+NME I + + +IE  +T G LTL SLA  F DL   + +DYK
Sbjct:   380 QEKEMLINEEEKQKRHLENMEYIADEISRIELENTSGNLTLDSLAIRFEDLQTSYPDDYK 439

Query:   431 LCNLASIACSFALPLFIRMFQGWDPLQNPSHKMEVVLMWKNVLQTDDSQDIWDLSTPYSQ 490
             LC+L++IACS ALPLFIRMFQGWDPL +  H ++ +  W+ +L+ ++  +IW +STPYSQ
Sbjct:   440 LCSLSTIACSLALPLFIRMFQGWDPLSDAVHGLKAISSWRKLLEVEEDHNIWVVSTPYSQ 499

Query:   491 LISEVVLPAVRIAGINTWDPRDPEQMLRFLESWEKLLPSSVLHTILDTVVLPKLTSAVDS 550
             L+SEVVLPAVRIAGINTW+PRDPE MLRFLE+WE LLPSSVL TILDTVVLPKL++AV+ 
Sbjct:   500 LVSEVVLPAVRIAGINTWEPRDPEPMLRFLETWETLLPSSVLQTILDTVVLPKLSTAVEY 559

Query:   551 WDPRRETVPIHVWVHPWLPLLGHKLEGLYQMIRMKLSNVLDAWHPSDASAYTILSPWKTV 610
             WDPRRE V IHVWVHPWLP+LG KLE LYQ+I+MKLSNVLDAWHPSD+SAYTILSPWKTV
Sbjct:   560 WDPRRELVAIHVWVHPWLPILGQKLEFLYQIIQMKLSNVLDAWHPSDSSAYTILSPWKTV 619

Query:   611 FDSASWEQLMRRYIVPK-------FQINPLEQKLDQFNWVMPWASAVPTHLMVDLMERFF 663
             FD+ SWEQLMRRYIVPK       FQ+NP  Q L++F+WVM WASAVP HLM D+MERFF
Sbjct:   620 FDTTSWEQLMRRYIVPKLQLALQEFQVNPANQNLERFDWVMKWASAVPIHLMADMMERFF 679

Query:   664 FTKWLHVLYHWLNTAPDFEEIHRWYLGWKGLIPEELLANQNIRAQLNVGLDMMSQAAEGG 723
             F KWL VLYHWL   P FEEI  WY GWK L P+EL AN+ IR QL  GLDM+ +A EG 
Sbjct:   680 FPKWLDVLYHWLRAKPRFEEIQGWYYGWKELFPQELTANERIRIQLKRGLDMLMEAVEGV 739

Query:   724 IVVQPGTVEN 733
              V QP    N
Sbjct:   740 EVSQPRAKAN 749

GO:0003676 "nucleic acid binding" evidence=IEA;ISS

GO:0003677 "DNA binding" evidence=IEA

GO:0005622 "intracellular" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0000398 "mRNA splicing, via spliceosome" evidence=IMP

GO:0031981 "nuclear lumen" evidence=IDA

GO:0042752 "regulation of circadian rhythm" evidence=IMP

TAIR\|locus:2053839 AT2G42330 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

UNIPROTKB\|Q66J74 tfip11 "Tuftelin-interacting protein 11" [Xenopus laevis (taxid:8355)]	Back alignment and assigned GO terms

UNIPROTKB\|Q29RR5 TFIP11 "Tuftelin-interacting protein 11" [Bos taurus (taxid:9913)]	Back alignment and assigned GO terms

UNIPROTKB\|F1MR60 TFIP11 "Tuftelin-interacting protein 11" [Bos taurus (taxid:9913)]	Back alignment and assigned GO terms

UNIPROTKB\|Q0IIX9 tfip11 "Tuftelin-interacting protein 11" [Xenopus (Silurana) tropicalis (taxid:8364)]	Back alignment and assigned GO terms

MGI\|MGI:1930075 Tfip11 "tuftelin interacting protein 11" [Mus musculus (taxid:10090)]	Back alignment and assigned GO terms

RGD\|1311449 Tfip11 "tuftelin interacting protein 11" [Rattus norvegicus (taxid:10116)]	Back alignment and assigned GO terms

UNIPROTKB\|A1XD95 TFIP11 "Tuftelin-interacting protein 11" [Macaca fascicularis (taxid:9541)]	Back alignment and assigned GO terms

UNIPROTKB\|Q9UBB9 TFIP11 "Tuftelin-interacting protein 11" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q29RR5	TFP11_BOVIN	No assigned EC number	0.3193	0.8922	0.9103	yes	no
A4UMC5	TFP11_RABIT	No assigned EC number	0.3149	0.8840	0.9020	yes	no
Q6DI35	TFP11_DANRE	No assigned EC number	0.3082	0.8911	0.9146	yes	no
Q9ERA6	TFP11_MOUSE	No assigned EC number	0.3242	0.8887	0.9057	yes	no
Q0IIX9	TFP11_XENTR	No assigned EC number	0.3129	0.8805	0.9115	yes	no
Q5R5K8	TFP11_PONAB	No assigned EC number	0.3187	0.8817	0.8996	yes	no
Q06AK6	TFP11_PIG	No assigned EC number	0.3152	0.8922	0.9114	yes	no
A1XD97	TFP11_CANFA	No assigned EC number	0.3185	0.8899	0.9080	yes	no
A1XD94	TFP11_MACMU	No assigned EC number	0.3220	0.8887	0.9068	yes	no
A1XD93	TFP11_PANTR	No assigned EC number	0.3198	0.8817	0.8996	yes	no
Q5U2Y6	TFP11_RAT	No assigned EC number	0.3240	0.8969	0.9151	yes	no
Q9UBB9	TFP11_HUMAN	No assigned EC number	0.3198	0.8817	0.8996	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	fgenesh4_pm.C_LG_XIII000323	hypothetical protein (845 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
		Sorry, there are no predicted associations at the current settings.

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		854
pfam07842		275	pfam07842, GCFC, GC-rich sequence DNA-binding fact	2e-94
pfam12457		106	pfam12457, TIP_N, Tuftelin interacting protein N t	2e-17
smart00443		47	smart00443, G_patch, glycine rich nucleic binding	8e-16
pfam01585		45	pfam01585, G-patch, G-patch domain	1e-14
pfam12656		79	pfam12656, G-patch_2, DExH-box splicing factor bin	4e-05

>gnl\|CDD\|219603 pfam07842, GCFC, GC-rich sequence DNA-binding factor-like protein	Back alignment and domain information

 Score =  297 bits (761), Expect = 2e-94
 Identities = 120/273 (43%), Positives = 166/273 (60%), Gaps = 16/273 (5%)

Query: 414 LANYFSDLHKRFANDYKLCNLASIACSFALPLFIRMFQGWDPLQNPSHKMEVVLMWKNVL 473
           +A  F DL +++  +YK   L+ +A +   PL       WDPL++P++ ++++  WK +L
Sbjct: 4   VAEIFEDLQRKYPEEYKEAYLSLLAPALVAPLLRLELLEWDPLEDPTYGVDILKRWKALL 63

Query: 474 QTDDSQD--IWDLSTPYSQLISEVVLPAVRIAGINTWDPRDPEQMLRFLESWEKLLPSSV 531
           + D S D    +   PY  ++ E  LP  R + ++TWDPRDP+ ML  LE+W  LLPS +
Sbjct: 64  ELDSSDDTGGAESMDPYETMLWEGWLPRYRSSALSTWDPRDPDPMLNLLEAWAPLLPSFI 123

Query: 532 LHTILDTVVLPKLTSAVDSWDPRRETV-----PIHVWVHPWLPLLGH-KLEGLYQMIRMK 585
           L  IL+ +VLPKLT+AV+ WDP  +TV     PIH WV PWLPLLG  +LE LY  IR K
Sbjct: 124 LDNILEQLVLPKLTAAVEEWDPLSDTVTRHLVPIHSWVFPWLPLLGEARLEPLYPAIRRK 183

Query: 586 LSNVLDAWHPSDASAYTILSPWKTVFDSASWEQLMRRYIVPK-------FQINPLEQKLD 638
           L   LDAWHPSD SA   L PWK VF  A W+ L+ R+I+PK       F+INP +Q LD
Sbjct: 184 LRQALDAWHPSD-SALAGLKPWKDVFSPAEWDPLLLRHILPKLARFLQEFEINPRQQALD 242

Query: 639 QFNWVMPWASAVPTHLMVDLMERFFFTKWLHVL 671
               V+ W   +   ++ +L+E+ FF KWL VL
Sbjct: 243 LLRNVLKWKGLLSPSVLAELLEKEFFPKWLQVL 275

Sequences found in this family are similar to a region of a human GC-rich sequence DNA-binding factor homolog. This is thought to be a protein involved in transcriptional regulation due to partial homologies to a transcription repressor and histone-interacting protein. This family also contains tuftelin interacting protein 11 which has been identified as both a nuclear and cytoplasmic protein, and has been implicated in the secretory pathway. Sip1, a septin interacting protein is also a member of this family. Length = 275

>gnl\|CDD\|221586 pfam12457, TIP_N, Tuftelin interacting protein N terminal	Back alignment and domain information

>gnl\|CDD\|197727 smart00443, G_patch, glycine rich nucleic binding domain	Back alignment and domain information

>gnl\|CDD\|144978 pfam01585, G-patch, G-patch domain	Back alignment and domain information

>gnl\|CDD\|221692 pfam12656, G-patch_2, DExH-box splicing factor binding site	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		854
KOG2184		767	consensus Tuftelin-interacting protein TIP39, cont	100.0
PF07842		276	GCFC: GC-rich sequence DNA-binding factor-like pro	100.0
PF12457		109	TIP_N: Tuftelin interacting protein N terminal ; I	99.88
KOG2184		767	consensus Tuftelin-interacting protein TIP39, cont	99.73
PF07842		276	GCFC: GC-rich sequence DNA-binding factor-like pro	99.64
PF01585		45	G-patch: G-patch domain; InterPro: IPR000467 The D	99.29
smart00443		47	G_patch glycine rich nucleic binding domain. A pre	99.1
KOG2185		486	consensus Predicted RNA-processing protein, contai	98.76
PF12656		77	G-patch_2: DExH-box splicing factor binding site	98.43
KOG2809		326	consensus Telomerase elongation inhibitor/RNA matu	98.38
KOG0965		988	consensus Predicted RNA-binding protein, contains	98.23
KOG3673		845	consensus FtsJ-like RNA methyltransferase [RNA pro	98.18
KOG1996		378	consensus mRNA splicing factor [RNA processing and	98.01
KOG2384		223	consensus Major histocompatibility complex protein	97.73
KOG4315		455	consensus G-patch nucleic acid binding protein [Ge	97.08
KOG1994		268	consensus Predicted RNA binding protein, contains	96.66
KOG0154		573	consensus RNA-binding protein RBM5 and related pro	96.39
KOG2138		883	consensus Predicted RNA binding protein, contains	93.33
KOG4368		757	consensus Predicted RNA binding protein, contains	93.07
KOG1994		268	consensus Predicted RNA binding protein, contains	83.45
PRK14139		185	heat shock protein GrpE; Provisional	80.21

>KOG2184 consensus Tuftelin-interacting protein TIP39, contains G-patch domain [RNA processing and modification]	Back alignment and domain information

Probab=100.00  E-value=2.7e-133  Score=1152.17  Aligned_cols=633  Identities=46%  Similarity=0.795  Sum_probs=561.6

Q ss_pred             cccCCC--CcHHHHHHHHcCCCCCCCCCCCCCCcccceeeeecCCCcccc-ccccchhhhhccCCcccccccc--ccCCC
Q 041601          190 GGDIGV--GNVVMKMMEKMGWYKGRGLGKDEQGITAPIEARLRPKNMGMG-YNDFKETEAAKLPGLEKLEDKK--TVGQQ  264 (854)
Q Consensus       190 ~~~~~~--~~~g~kml~kmG~~~G~gLG~~~qGi~~pi~~~~~~~~~glg-~~~~~E~~~~~~~~~~~~~~~~--~~~~~  264 (854)
                      +|.|+.  +|||+|||+||||++|+||||++|||++||++++||+++|+| |+.+.|++  .-+.++..++.+  .+...
T Consensus       108 ~~~~e~~t~gig~Kll~kMGYkpG~GLGkn~qGIv~Pieaq~Rp~rgg~Gay~~e~~~s--s~~~~~~~~~~e~~~~~s~  185 (767)
T KOG2184|consen  108 FGDFEKGTKGIGAKLLEKMGYKPGKGLGKNAQGIVAPIEAQLRPGRGGLGAYGFETEAS--SHKDLEKVDSSEDTVSVSV  185 (767)
T ss_pred             hhhhhhcccchhHHHHHHcCCccccccCccccccccHHhcccCccCccccccccccccc--cccchhhhhcccccccccc
Confidence            678887  899999999999999999999999999999999999999999 55433332  222223222211  11111


Q ss_pred             Ccccchhhhhhhh----cccCCcccccCHHHHHHhhhcc-----ccceEEecCCCcceeecccccchhhhhhccCCCC-C
Q 041601          265 QPKGRNKERLWSK----LKVKKKEEYITAEELLENKREQ-----VVQKVIDMRGPQVRVLTNLENLDAEEKARENDVP-M  334 (854)
Q Consensus       265 ~~~~~~~~~~WkK----~~~k~k~~y~T~ee~~~~~~~~-----~~~~IIDmtG~~~rvls~~~~l~~~~~~~~~~~~-~  334 (854)
                      ++++.+....|+|    +++..|+.|+|+|||++++..+     ...+|||||||+++|+++|+++.....++.++++ +
T Consensus       186 se~~~~~~~~~~~~~~~kk~~~k~~y~t~eEl~~~g~~~~~~~~~~~~vid~~g~~~~vvs~~~~~~~~~~~~~d~v~~~  265 (767)
T KOG2184|consen  186 SEDKEKHGSKGRKGSEKKKKGVKTSYRTVEELMAKGLKQESKFLSGVKVIDMTGPEKRVVSGYESLLEEEKASDDGVPQR  265 (767)
T ss_pred             chhhhhcccccccChhhccCccchhhccHHHHHhccccchhhhccCceeeccCCcceeeehhhhcchhhhcCCccccccc
Confidence            2222333344554    3567789999999999997443     4559999999999999999999988777777777 9


Q ss_pred             hhhhhhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCcccHHHH
Q 041601          335 PELQHNVRLIVDLAEVDIQKIDKDLNNARETALSLQKEKENLEKTAAEQKQQLDNMETIVNVLGQIEKGHTLGTLTLVSL  414 (854)
Q Consensus       335 pEL~hNl~llv~~~e~di~~~~~~~~~e~d~~~~L~~e~~~l~~~~~~e~~~i~~l~~~~~~v~~~~~~~~~~~~tl~~~  414 (854)
                      |||+||++++|+.+|+.|++++++++.+++....|+++.+.++..++.++.+++.+..+.+.|+.++...+...+||++|
T Consensus       266 pel~hnl~~~v~~~E~~i~~~~~~lr~e~~~~~~le~~~e~~~~~~~~~~~~~~~l~~~~e~v~~~e~~~~~~~~tld~~  345 (767)
T KOG2184|consen  266 PELQHNLQLLVSLQESQIRRSDRQLRIERDQALNLEKEIEKLEEELDLEKTHEQSLRKVEESVDEAELDVSSKRLTLDEL  345 (767)
T ss_pred             cchhhhhHHHhhhhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhhhhhccCCccccHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999998777777999999


Q ss_pred             HHHHHHHHHhhHHHHhhCChHHHHHHHhhhHHHHhhcCCCCCCCCchhHHHHHHhHhhhcCCCCCcccccCChHHHHHHH
Q 041601          415 ANYFSDLHKRFANDYKLCNLASIACSFALPLFIRMFQGWDPLQNPSHKMEVVLMWKNVLQTDDSQDIWDLSTPYSQLISE  494 (854)
Q Consensus       415 ~~~f~~L~~~~~~ey~~~~L~~la~~~v~Pll~~~~~~WdPL~dP~~~~~~i~~Wk~lL~~~~~~~~~~~~~~y~~Ll~~  494 (854)
                      ...|+.|+.+||++|.+|+|.++|+++++|++.+.|..|+||.+|.++++.+.+||.+|+..+...+.+..++|++++|.
T Consensus       346 ~~~fe~L~~eY~~~~~~~~l~~~a~~i~~pL~~~~~~~Wdpl~d~~~g~e~i~~wk~lL~~~~~~~~~~~~~~~~~li~e  425 (767)
T KOG2184|consen  346 AILFELLRMEYPEEYTLKSLSSIAVSIVLPLLKRYLKFWDPLEDPYSGLESISKWKALLEQSDDLRKRDEIDPYSSLIWE  425 (767)
T ss_pred             HHHHHHhhhhccccccccccccchhhhhhHHHHHHhhccCcccCccchhHHHHHHHhhhhhhccchhhccccccceeeee
Confidence            99999999999999999999999999999999999999999999999999999999999987655545678899999999


Q ss_pred             hhHHHHHHhhhCCCCCCChhHHHHHHHHhhhhcchhHHHHhhhhhhHHHHHHhhhccCCCCCCCCcchhhhcchhhhhhh
Q 041601          495 VVLPAVRIAGINTWDPRDPEQMLRFLESWEKLLPSSVLHTILDTVVLPKLTSAVDSWDPRRETVPIHVWVHPWLPLLGHK  574 (854)
Q Consensus       495 ~~lP~ir~av~~~Wdp~dp~p~l~~l~~W~plLP~~i~~~ileqlIlPKL~~aV~~W~P~~~~~p~h~wL~PWlp~L~~~  574 (854)
                      .|||++|.+..+.|.|+|+.||+.||+.|.++||.||.++|++++|+|||..+|++|+|+++++|+|+|||||+|+++.+
T Consensus       426 ~~~p~vr~~~l~~w~~~d~~~m~~lle~W~~~lp~~VldnIl~~~v~pkl~~~v~~W~p~~d~~~i~swi~pwl~il~~r  505 (767)
T KOG2184|consen  426 GVMPKVRKAELATWEPRDMLPMLSLLEAWVPLLPSWVLDNILDQLVLPKLSAAVSQWDPLTDTVPIHSWIHPWLPILGQR  505 (767)
T ss_pred             eecHHHHHHHHhccCccchhHHHhHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhcccccceeeecchHHHhhh
Confidence            99999999444579999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhccccCCCCchhhhhccchhhhcChhhHHHHHHhccCcc-------ceeCCCCCchhhHhhhhccc
Q 041601          575 LEGLYQMIRMKLSNVLDAWHPSDASAYTILSPWKTVFDSASWEQLMRRYIVPK-------FQINPLEQKLDQFNWVMPWA  647 (854)
Q Consensus       575 l~~L~~~Ir~KL~~~L~~W~p~d~sa~~~L~pWk~vf~~~~~~~ll~k~ilPK-------f~inP~~Q~le~~~~v~~W~  647 (854)
                      ++.||+.|+.||+.+|..|+|+|.+++++|.|||.||++.+|..|+.++|+||       +.|||.+|+++.|.|||.|+
T Consensus       506 ~~~l~~~i~~Kls~~l~~W~p~d~sa~~~l~pWK~~f~~~~~~~~~~~~ivpkl~~~l~e~~inp~~q~l~~~~~v~~w~  585 (767)
T KOG2184|consen  506 LESLYPSIRSKLSIALDAWHPSDRSAIAILSPWKTVFDAASWKEFMRRYIVPKLQLALDELQINPMNQDLERFTWVMEWK  585 (767)
T ss_pred             HHHhhhHHHHHHHHHhhcCCCcccCchhhhccchhccchhhHHHHHhhcccccHHHHhhhhccCccccchhhhhhhhhhh
Confidence            99999999999999999999999999999999999999999999999999999       56999999999999999999


Q ss_pred             cCCchhHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhChHHHhhhhhHHHHHHHHHHHHHHHHcCCCCCC
Q 041601          648 SAVPTHLMVDLMERFFFTKWLHVLYHWLNTAPDFEEIHRWYLGWKGLIPEELLANQNIRAQLNVGLDMMSQAAEGGIVVQ  727 (854)
Q Consensus       648 ~~i~~~~m~~lL~~~fFpkWl~~L~~WL~~~~~~~eV~~WY~~Wk~~fp~el~~~~~Ik~~f~~aL~mmn~a~~~~~l~~  727 (854)
                      ++|++++|++++++||||||+++||+||++.|+|.||..||.|||++||..+++++.|+..|++||+||++|++...+.+
T Consensus       586 ~~i~~~~~~~l~~~hffpkwl~~l~~WL~n~p~~~Ei~~wy~gwK~~~~~~ll~~~~v~~~~k~~ld~~~r~~~~~~l~~  665 (767)
T KOG2184|consen  586 GLIDPHLMAQLLERHFFPKWLNVLYHWLSNSPDYDEISRWYTGWKSMFPQELLANPYVKDKFKRGLDMMNRAVERLELGQ  665 (767)
T ss_pred             cccCHHHHHHHHHHhhhHHHHHHHHHHhcCCCchHHHHHHHHhHHHhccHhhhcCchhhhhhhhhHHHHHHhhcccccCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999877777


Q ss_pred             CCccchhhhHHHHhhhhHHHHHHHHHHHHHHHHHhccCCCcccCCCC-CCccccHHHHHHHHHHHcCCeeeeCCCCccCC
Q 041601          728 PGTVENISYLKAREQRQFEAQQKAAAQAQQAAAAAAGLGSATQMNGM-DGRQMTLKEVIEAYAQQHELLFKPKPGRMHNG  806 (854)
Q Consensus       728 P~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ip~-~~~~~sFKdvVE~~c~e~gllf~P~~gr~~~G  806 (854)
                      |.+.+++.     +.        +           ..+.++++.++. ....+||||+||.+|+++||+|.|+++|+|+|
T Consensus       666 p~a~d~~~-----~~--------~-----------~~~~~a~~~~~~~~~s~lsfKe~vE~~a~e~g~l~~p~~~r~~~G  721 (767)
T KOG2184|consen  666 PFAIDNIQ-----PS--------P-----------QSPNMAVAKIQLSSSSVLSFKELVENFAAENGLLFKPLPGRLHNG  721 (767)
T ss_pred             CccccccC-----CC--------C-----------CCCCcchhcccCCCcccccHHHHHHHHhcccCeeeccCccccccC
Confidence            87765431     00        0           001111222222 22227999999999999999999999999999


Q ss_pred             cceeeeccEEEEEeCCCcEEEEecCCcccccCHHHHHHHhhh
Q 041601          807 QQIYGFGNISIYVDSLNQMLYAQKPEGWTPVTLDTLLKMHHN  848 (854)
Q Consensus       807 ~qlY~fG~v~iyId~~~~vv~~~~~~~w~PisL~~Ll~~~~~  848 (854)
                      +|+|+||.++||+|+.+..|..+..+.|.|+++..|++|+..
T Consensus       722 ~q~f~~g~~~iy~d~~~~~v~~~~~~~w~P~~~~~l~~m~~~  763 (767)
T KOG2184|consen  722 RQIFRFGNISIYLDSENSKVLDQSEGIWVPVSLNSLLEMALI  763 (767)
T ss_pred             ceeeeeeeEEEEecccceeeecccccceeecChhhHHHHHhh
Confidence            999999999999999877888888899999999999999974

>PF07842 GCFC: GC-rich sequence DNA-binding factor-like protein; InterPro: IPR022783 Sequences in this group are similar to a region of a human GC-rich sequence DNA-binding factor homologue (Q9Y5B6 from SWISSPROT)	Back alignment and domain information

>PF12457 TIP_N: Tuftelin interacting protein N terminal ; InterPro: IPR022159 This domain family is found in eukaryotes, and is typically between 99 and 114 amino acids in length	Back alignment and domain information

>KOG2184 consensus Tuftelin-interacting protein TIP39, contains G-patch domain [RNA processing and modification]	Back alignment and domain information

>PF07842 GCFC: GC-rich sequence DNA-binding factor-like protein; InterPro: IPR022783 Sequences in this group are similar to a region of a human GC-rich sequence DNA-binding factor homologue (Q9Y5B6 from SWISSPROT)	Back alignment and domain information

>PF01585 G-patch: G-patch domain; InterPro: IPR000467 The D111/G-patch domain [] is a short conserved region of about 40 amino acids which occurs in a number of putative RNA-binding proteins, including tumor suppressor and DNA-damage-repair proteins, suggesting that this domain may have an RNA binding function	Back alignment and domain information

>smart00443 G_patch glycine rich nucleic binding domain	Back alignment and domain information

>KOG2185 consensus Predicted RNA-processing protein, contains G-patch domain [RNA processing and modification]	Back alignment and domain information

>PF12656 G-patch_2: DExH-box splicing factor binding site	Back alignment and domain information

>KOG2809 consensus Telomerase elongation inhibitor/RNA maturation protein PINX1 [RNA processing and modification; Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>KOG0965 consensus Predicted RNA-binding protein, contains SWAP and G-patch domains [General function prediction only]	Back alignment and domain information

>KOG3673 consensus FtsJ-like RNA methyltransferase [RNA processing and modification]	Back alignment and domain information

>KOG1996 consensus mRNA splicing factor [RNA processing and modification]	Back alignment and domain information

>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]	Back alignment and domain information

>KOG4315 consensus G-patch nucleic acid binding protein [General function prediction only]	Back alignment and domain information

>KOG1994 consensus Predicted RNA binding protein, contains G-patch and Zn-finger domains [RNA processing and modification]	Back alignment and domain information

>KOG0154 consensus RNA-binding protein RBM5 and related proteins, contain G-patch and RRM domains [General function prediction only]	Back alignment and domain information

>KOG2138 consensus Predicted RNA binding protein, contains G-patch domain [RNA processing and modification]	Back alignment and domain information

>KOG4368 consensus Predicted RNA binding protein, contains SWAP, RPR and G-patch domains [General function prediction only]	Back alignment and domain information

>KOG1994 consensus Predicted RNA binding protein, contains G-patch and Zn-finger domains [RNA processing and modification]	Back alignment and domain information

>PRK14139 heat shock protein GrpE; Provisional	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		854
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-13

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

 Score = 72.2 bits (176), Expect = 6e-13
 Identities = 115/738 (15%), Positives = 205/738 (27%), Gaps = 252/738 (34%)

Query: 15  DFEGGQWINGEFYYKKRRAKPTQTKDDVLYGVFADDSDEDDDDDRDFGRKADLTKPVNFV 74
           DFE G+    ++ YK           D+L  VF D   ++     D     D+ K +   
Sbjct: 8   DFETGEH---QYQYK-----------DILS-VFEDAFVDN----FDCKDVQDMPKSI--- 45

Query: 75  STGTVMPEQEIDKNVKEENVD-----MFEDDDSGNRSGVGLGFGSGNPASASGLGFSASN 129
                + ++EID  +  ++       +F    S     V                F  S 
Sbjct: 46  -----LSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEE---VLRINYKFLMSP 97

Query: 130 SKKSDNG--------VKVSDEACDGDDSFLQTPFGRRIKEEAQRKEKEREREKEREKLRS 181
            K             ++  D   + +  F         K    R +   +  +   +LR 
Sbjct: 98  IKTEQRQPSMMTRMYIEQRDRLYNDNQVF--------AKYNVSRLQPYLKLRQALLELRP 149

Query: 182 EKRTQGGKGGDIGVGNVVMKMMEKMGWYKGRGLGKDEQGITAPIEARLRPKNMGMGYNDF 241
            K             NV+   ++ +                            G G    
Sbjct: 150 AK-------------NVL---IDGVL---------------------------GSG---- 162

Query: 242 KETEAAKLPGLEKLEDKKTVGQQQPKGRNKERLWSKLKVKKKEEYITAEELLENKREQVV 301
           K   A      +     K V  +          W  LK     E +   E+L+    Q+ 
Sbjct: 163 KTWVAL-----DVCLSYK-VQCKMDFK----IFWLNLKNCNSPETVL--EMLQKLLYQID 210

Query: 302 QKVIDMRGPQVRVLTNLENLDAEEKARENDVPMPELQHNVRLIVDLAEVDIQKIDKDLNN 361
                       +   +       +A    + +    +   L+V L  V   K     N 
Sbjct: 211 PNWTSRSDHSSNIKLRIH----SIQAELRRL-LKSKPYENCLLV-LLNVQNAKAWNAFNL 264

Query: 362 ARETALSLQKEKENLEKTAAEQKQQLDNMETIVNVLGQIEKGHTLG-TLTLVSLANYFSD 420
           + +  L   + K+  +         L    T    L       T     +L  L  Y   
Sbjct: 265 SCKI-LLTTRFKQVTD--------FLSAATTTHISLDHHSMTLTPDEVKSL--LLKYL-- 311

Query: 421 LHKRFANDYKLCNLASIACSFALPLFIRMFQG---------WDPLQNP-----SHKMEVV 466
                  D +  +L     +   P  + +            WD  ++      +  +E  
Sbjct: 312 -------DCRPQDLPREVLT-TNPRRLSII-AESIRDGLATWDNWKHVNCDKLTTIIESS 362

Query: 467 LMWKNVLQTDDSQDIWDLSTPYSQLISEVVLPA-VRIAGINTWDPRDPEQMLRFLESWEK 525
           L   NVL+  + + +      + +L    V P    I          P  +L  +  W  
Sbjct: 363 L---NVLEPAEYRKM------FDRL---SVFPPSAHI----------PTILLSLI--WFD 398

Query: 526 LLPSSVLHTILDTVVLPKLT--SAVDSWDPRRETVPIHVWVHPWLPLLGHKLEGLYQMIR 583
           ++ S V+      VV+ KL   S V+   P+  T+ I                 +Y  ++
Sbjct: 399 VIKSDVM------VVVNKLHKYSLVEKQ-PKESTISIP---------------SIYLELK 436

Query: 584 MKLSNVLDAWHPSDASAYTILSPWKTVFDSASWEQLMRRYIVPK--FQINPLEQKLDQFN 641
           +KL N   A H                        ++  Y +PK     + +   LDQ+ 
Sbjct: 437 VKLEN-EYALH----------------------RSIVDHYNIPKTFDSDDLIPPYLDQY- 472

Query: 642 WVMPWASAVPTHL-------MVDLMERFFFT-KWL-----HVLYHW------LNTAPDFE 682
               + S +  HL        + L    F   ++L     H    W      LNT     
Sbjct: 473 ----FYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQL- 527

Query: 683 EIHRWYLGWKGLIPEELL 700
           + ++ Y+       E L+
Sbjct: 528 KFYKPYICDNDPKYERLV 545

PyMOL of 1vt4

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00