Citrus Sinensis ID: 041635

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-----
MEPLPLHLCKPYKLSSILNRLYSLIHVTALTSLIYYRVSSLASTPLASLPAQLLVFALELLLSLLWLLNQAYLWNPVSRRVFPERLPENEQNLPAIDVFICTADPKKEPPLEVMNTVLSAMALDYPSKKLHVYLSDDAGSALTLLALRQACAFASSWLPFCRRFGIKTRCPKVYFSNLNDDHCFTRSVEYEKERVNIKRKYELFKEHIRIAEEEKSSATDKINPSIVEVIIDKSDDEVRANQVEMPLLVYVSREKRPPHPHHFKAGALNCLLRVSSILSNSPYILVLDCDMFCNDPTSAKQAMCFHLDPKLSPSLAFVQFPQKFHNISSNDIYDSQLRTTFQVHS
ccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccEEEEEEccccccccHHHHHHHHHHHHcccccccccEEEEEcccccHHHHHHHHHHHHHHHccHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHcccccccccccccccEEEEEEccccccccccccccHHHHHHHHccccccccEEEEEccccccccHHHHHHHHHHHcccccccccEEEEcccccccccccccccccccEEEEEcc
ccccccccEEccccccccHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHcccccccccccEEEEEcccccccccEEEHHHHHHHHHccccccEEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHcccccccccccHHHHHHHHHHHHHHHHcEEEEccccHHcccccccccccEEEEEEcccccccccccccccEEEEEEcccccccccccHHHHHHHHHHHHHHHccccEEEEEccccccccHHHHHHHHHHHccccccccEEEEEccccccccccccccccccEEEEEccc
meplplhlckpyklsSILNRLYSLIHVTALTSLIYYRVsslastplaslPAQLLVFALELLLSLLWLLNQaylwnpvsrrvfperlpeneqnlpaidvfictadpkkepplEVMNTVLSAMAldypskklhvYLSDDAGSALTLLALRQACAFAsswlpfcrrfgiktrcpkvyfsnlnddhcftRSVEYEKERVNIKRKYELFKEHIRIAEEekssatdkinpSIVEVIIDKSDDEVRANQVEMPLLVyvsrekrpphphhfkagALNCLLRVSsilsnspyilvldcdmfcndptsakqamcfhldpklspslafvqfpqkfhnissndiydsqlRTTFQVHS
meplplhlCKPYKLSSILNRLYSLIHVTALTSLIYYRVSSLASTPLASLPAQLLVFALELLLSLLWLLNQAYLWNPVSRRVFPERLPENEQNLPAIDVFICTADPKKEPPLEVMNTVLSAMALDYPSKKLHVYLSDDAGSALTLLALRQACAFASSWLPFCRRFGIKTRCPKVYfsnlnddhcftrsveyekervnikrkyeLFKEHIRiaeeekssatdkinpsIVEVIIDKSDDEVRANQVEMPLLVYVSREKRPPHPHHFKAGALNCLLRVSSILSNSPYILVLDCDMFCNDPTSAKQAMCFHLDPKLSPSLAFVQFPQKFHNISSNDIYDSQLRTTFQVHS
MEPLPLHLCKPYKLSSILNRLYSLIHVTALTSLIYYRVsslastplaslpaqllvfalelllsllwllnqaylWNPVSRRVFPERLPENEQNLPAIDVFICTADPKKEPPLEVMNTVLSAMALDYPSKKLHVYLSDDAGSALTLLALRQACAFASSWLPFCRRFGIKTRCPKVYFSNLNDDHCFTRSVEYEKERVNIKRKYELFKEHIRIAEEEKSSATDKINPSIVEVIIDKSDDEVRANQVEMPLLVYVSREKRPPHPHHFKAGALNCLLRVSSILSNSPYILVLDCDMFCNDPTSAKQAMCFHLDPKLSPSLAFVQFPQKFHNISSNDIYDSQLRTTFQVHS
*****LHLCKPYKLSSILNRLYSLIHVTALTSLIYYRVSSLASTPLASLPAQLLVFALELLLSLLWLLNQAYLWNPVSRRVFPERLPENEQNLPAIDVFICTADPK**PPLEVMNTVLSAMALDYPSKKLHVYLSDDAGSALTLLALRQACAFASSWLPFCRRFGIKTRCPKVYFSNLNDDHCFTRSVEYEKERVNIKRKYELFKEHIRIA************PSIVEVIIDKSDDEVRANQVEMPLLVYVSR******PHHFKAGALNCLLRVSSILSNSPYILVLDCDMFCNDPTSAKQAMCFHLDPKLSPSLAFVQFPQKFHNISSNDIYD***********
**PLPLHLCKPYKLSSILNRLYSLIHVTALTSLIYYRVSSLASTPLASLPAQLLVFALELLLSLLWLLNQAYLWNPVSRRVFPERLPENEQNLPAIDVFICTADPKKEPPLEVMNTVLSAMALDYPSKKLHVYLSDDAGSALTLLALRQACAFASSWLPFCRRFGIKTRCPKVYFSNLNDDHCFTRSVEYEKERVNIKRKYELFKEHIRIAEEEKSSATDKINPSIVEVIIDKSDDEVRANQVEMPLLVYVSREKRPPHPHHFKAGALNCLLRVSSILSNSPYILVLDCDMFCNDPTSAKQAMCFHLDPKLSPSLAFVQFPQKFHNISSNDIYDSQLRTTFQVHS
MEPLPLHLCKPYKLSSILNRLYSLIHVTALTSLIYYRVSSLASTPLASLPAQLLVFALELLLSLLWLLNQAYLWNPVSRRVFPERLPENEQNLPAIDVFICTADPKKEPPLEVMNTVLSAMALDYPSKKLHVYLSDDAGSALTLLALRQACAFASSWLPFCRRFGIKTRCPKVYFSNLNDDHCFTRSVEYEKERVNIKRKYELFKEHIRIAEEEKSSATDKINPSIVEVIIDKSDDEVRANQVEMPLLVYVSREKRPPHPHHFKAGALNCLLRVSSILSNSPYILVLDCDMFCNDPTSAKQAMCFHLDPKLSPSLAFVQFPQKFHNISSNDIYDSQLRTTFQVHS
**PLPLHLCKPYKLSSILNRLYSLIHVTALTSLIYYRVSSLASTPLASLPAQLLVFALELLLSLLWLLNQAYLWNPVSRRVFPERLPENEQNLPAIDVFICTADPKKEPPLEVMNTVLSAMALDYPSKKLHVYLSDDAGSALTLLALRQACAFASSWLPFCRRFGIKTRCPKVYFSNLNDDHCFTRSVEYEKERVNIKRKYELFKEHIRIAEEEKSSATDKINPSIVEVIIDKSDDEVRANQVEMPLLVYVSREKRPPHPHHFKAGALNCLLRVSSILSNSPYILVLDCDMFCNDPTSAKQAMCFHLDPKLSPSLAFVQFPQKFHNISSNDIYDSQLRTTFQVHS
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MEPLPLHLCKPYKLSSILNRLYSLIHVTALTSLIYYRVSSLASTPLASLPAQLLVFALELLLSLLWLLNQAYLWNPVSRRVFPERLPENEQNLPAIDVFICTADPKKEPPLEVMNTVLSAMALDYPSKKLHVYLSDDAGSALTLLALRQACAFASSWLPFCRRFGIKTRCPKVYFSNLNDDHCFTRSVEYEKERVNIKRKYELFKEHIRIAEEEKSSATDKINPSIVEVIIDKSDDEVRANQVEMPLLVYVSREKRPPHPHHFKAGALNCLLRVSSILSNSPYILVLDCDMFCNDPTSAKQAMCFHLDPKLSPSLAFVQFPQKFHNISSNDIYDSQLRTTFQVHS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query345 2.2.26 [Sep-21-2011]
Q0WVN5 751 Cellulose synthase-like p yes no 0.950 0.436 0.409 3e-71
Q570S7 760 Cellulose synthase-like p no no 0.950 0.431 0.415 4e-71
Q651X7 737 Cellulose synthase-like p yes no 0.889 0.416 0.425 9e-71
Q8VYR4 722 Cellulose synthase-like p no no 0.953 0.455 0.405 4e-70
Q651X6 728 Cellulose synthase-like p no no 0.927 0.439 0.421 8e-70
Q8VZK9 729 Cellulose synthase-like p no no 0.930 0.440 0.402 4e-65
Q0DXZ1 745 Cellulose synthase-like p no no 0.942 0.436 0.390 9e-65
Q84ZN6 1081 Probable cellulose syntha no no 0.956 0.305 0.364 3e-61
Q851L8 1092 Probable cellulose syntha no no 0.956 0.302 0.361 2e-59
A2XNT2 1092 Probable cellulose syntha N/A no 0.956 0.302 0.361 2e-59
>sp|Q0WVN5|CSLG3_ARATH Cellulose synthase-like protein G3 OS=Arabidopsis thaliana GN=CSLG3 PE=2 SV=2 Back     alignment and function desciption
 Score =  269 bits (687), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 147/359 (40%), Positives = 210/359 (58%), Gaps = 31/359 (8%)

Query: 6   LHLCKPYKLSSILNRLYSLIHVTALTSLIYYRVSSLASTPLASLPAQLLVFALELLLSLL 65
           LH C P +  +I  R+Y++ H   + +L+Y+ V SL +     + + LL    +++L+ +
Sbjct: 33  LHTCHPCR-RTIPYRIYAVFHTCGIIALMYHHVHSLLTANTTLITSLLL--LSDIVLAFM 89

Query: 66  WLLNQAYLWNPVSRRVFPERLPENEQNLPAIDVFICTADPKKEPPLEVMNTVLSAMALDY 125
           W    +  + PV R  +PE+     ++ P +DVFICTADP KEPP+ V+NT LS MA +Y
Sbjct: 90  WATTTSLRYKPVRRTEYPEKYAAEPEDFPKLDVFICTADPYKEPPMMVVNTALSVMAYEY 149

Query: 126 PSKKLHVYLSDDAGSALTLLALRQACAFASSWLPFCRRFGIKTRCPKVYFSNLNDDHCFT 185
           PS K+ VY+SDD GS+LTL AL +A  F+  WLPFC++  ++ R P+VYFS+       +
Sbjct: 150 PSDKISVYVSDDGGSSLTLFALMEAAKFSKHWLPFCKKNNVQDRSPEVYFSS----KLRS 205

Query: 186 RSVEYEKERVNIKRKYELFKEHIR-IAEEEKSSA---------------TDKI----NPS 225
           RS E E    NIK  YE  K  +  + E  K                  TDK     +P+
Sbjct: 206 RSDEAE----NIKMMYEDMKSRVEHVVESGKVETAFITCDQFRGVFDLWTDKFTRHDHPT 261

Query: 226 IVEVIIDKSDDEVRANQVEMPLLVYVSREKRPPHPHHFKAGALNCLLRVSSILSNSPYIL 285
           I++V+ +  +D     +  MP L+YVSREK     HHFKAGALN LLRVS +++NSP IL
Sbjct: 262 IIQVLQNSENDMDDTKKYIMPNLIYVSREKSKVSSHHFKAGALNTLLRVSGVMTNSPIIL 321

Query: 286 VLDCDMFCNDPTSAKQAMCFHLDPKLSPSLAFVQFPQKFHNISSNDIYDSQLRTTFQVH 344
            LDCDM+ NDP +  +A+C+  DPK+   L FVQFPQ F  IS NDIY    +  F+++
Sbjct: 322 TLDCDMYSNDPATPVRALCYLTDPKIKTGLGFVQFPQTFQGISKNDIYACAYKRLFEIN 380
Thought to be a Golgi-localized beta-glycan synthase that polymerize the backbones of noncellulosic polysaccharides (hemicelluloses) of plant cell wall.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: -
>sp|Q570S7|CSLG1_ARATH Cellulose synthase-like protein G1 OS=Arabidopsis thaliana GN=CSLG1 PE=2 SV=1 Back     alignment and function description
>sp|Q651X7|CSLE1_ORYSJ Cellulose synthase-like protein E1 OS=Oryza sativa subsp. japonica GN=CSLE1 PE=2 SV=2 Back     alignment and function description
>sp|Q8VYR4|CSLG2_ARATH Cellulose synthase-like protein G2 OS=Arabidopsis thaliana GN=CSLG2 PE=2 SV=1 Back     alignment and function description
>sp|Q651X6|CSLE6_ORYSJ Cellulose synthase-like protein E6 OS=Oryza sativa subsp. japonica GN=CSLE6 PE=2 SV=1 Back     alignment and function description
>sp|Q8VZK9|CSLE1_ARATH Cellulose synthase-like protein E1 OS=Arabidopsis thaliana GN=CSLE1 PE=1 SV=1 Back     alignment and function description
>sp|Q0DXZ1|CSLE2_ORYSJ Cellulose synthase-like protein E2 OS=Oryza sativa subsp. japonica GN=CSLE2 PE=2 SV=1 Back     alignment and function description
>sp|Q84ZN6|CESA8_ORYSJ Probable cellulose synthase A catalytic subunit 8 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA8 PE=2 SV=1 Back     alignment and function description
>sp|Q851L8|CESA5_ORYSJ Probable cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA5 PE=2 SV=1 Back     alignment and function description
>sp|A2XNT2|CESA5_ORYSI Probable cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA5 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query345
224111026 723 predicted protein [Populus trichocarpa] 0.982 0.468 0.671 1e-123
429326514 723 cellulose synthase-like protein [Populus 0.982 0.468 0.662 1e-121
359477703 733 PREDICTED: cellulose synthase-like prote 0.953 0.448 0.630 1e-120
255576868 711 cellulose synthase, putative [Ricinus co 0.971 0.471 0.643 1e-119
297737188 822 unnamed protein product [Vitis vinifera] 0.944 0.396 0.620 1e-118
147785659 643 hypothetical protein VITISV_002996 [Viti 0.944 0.506 0.623 1e-118
359477392 678 PREDICTED: cellulose synthase-like prote 0.939 0.477 0.624 1e-117
359477617 550 PREDICTED: cellulose synthase A catalyti 0.950 0.596 0.612 1e-116
356548660 736 PREDICTED: cellulose synthase-like prote 0.982 0.460 0.62 1e-115
224111028 857 predicted protein [Populus trichocarpa] 0.979 0.394 0.569 1e-115
>gi|224111026|ref|XP_002315721.1| predicted protein [Populus trichocarpa] gi|222864761|gb|EEF01892.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  446 bits (1148), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 235/350 (67%), Positives = 275/350 (78%), Gaps = 11/350 (3%)

Query: 1   MEPLPLHLCKPYKLSSILNRLYSLIHVTALTSLIYYRVSS-LASTPLASLPAQLLVFALE 59
           M+ LPLH C P   S+I+NR YSL+H TAL +L YYR+SS L+S P ASLP  LLVFA E
Sbjct: 1   MKSLPLHACTPSISSAIINRSYSLLHFTALVALFYYRLSSFLSSKPKASLP-YLLVFASE 59

Query: 60  LLLSLLWLLNQAYLWNPVSRRVFPERLPENEQNLPAIDVFICTADPKKEPPLEVMNTVLS 119
           +LLS++WL +QAY W PVSR  FPERLPE+E+ LP IDVFICTAD KKEPPLEVMNTVLS
Sbjct: 60  MLLSIIWLFDQAYTWRPVSRTTFPERLPEDEE-LPGIDVFICTADHKKEPPLEVMNTVLS 118

Query: 120 AMALDYPSKKLHVYLSDDAGSALTLLALRQACAFASSWLPFCRRFGIKTRCPKVYFSNLN 179
           AMALDYP  KL VYLSDD GS+LTL  +R+A  FA SWLPFCRRFGIK RCPKVYFS+L 
Sbjct: 119 AMALDYPPDKLSVYLSDDGGSSLTLQGMREAWLFARSWLPFCRRFGIKIRCPKVYFSSLE 178

Query: 180 DDHCF-TRSVEYEKERVNIKRKYELFKEHIR-----IAEEEKSSATDKINPSIVEVIIDK 233
           D++     S+EYE+E+  IK KYELFKE +      I  EE +++ D  +P ++EVI D+
Sbjct: 179 DNYSGPLHSLEYEEEKEKIKGKYELFKERVNKAGEIIGSEEATNSKD--HPPVIEVINDE 236

Query: 234 SDDEVRANQVEMPLLVYVSREKRPPHPHHFKAGALNCLLRVSSILSNSPYILVLDCDMFC 293
             +     Q +MPLLVYVSREKRP H HHFKAGALN LLRVS I++NSPYILVLDCDM+C
Sbjct: 237 PKNVAAIRQAKMPLLVYVSREKRPSHSHHFKAGALNVLLRVSGIMTNSPYILVLDCDMYC 296

Query: 294 NDPTSAKQAMCFHLDPKLSPSLAFVQFPQKFHNISSNDIYDSQLRTTFQV 343
           NDPTSA+QAMCFHLDPK+SPSLAF+QFPQKFHNI+ NDIYD QLR  F +
Sbjct: 297 NDPTSARQAMCFHLDPKISPSLAFIQFPQKFHNINKNDIYDGQLRKLFVI 346

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|429326514|gb|AFZ78597.1| cellulose synthase-like protein [Populus tomentosa] Back     alignment and taxonomy information
>gi|359477703|ref|XP_002280696.2| PREDICTED: cellulose synthase-like protein G2-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|255576868|ref|XP_002529320.1| cellulose synthase, putative [Ricinus communis] gi|223531244|gb|EEF33089.1| cellulose synthase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|297737188|emb|CBI26389.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|147785659|emb|CAN70913.1| hypothetical protein VITISV_002996 [Vitis vinifera] Back     alignment and taxonomy information
>gi|359477392|ref|XP_002280640.2| PREDICTED: cellulose synthase-like protein G2-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|359477617|ref|XP_002280659.2| PREDICTED: cellulose synthase A catalytic subunit 4 [UDP-forming]-like, partial [Vitis vinifera] Back     alignment and taxonomy information
>gi|356548660|ref|XP_003542718.1| PREDICTED: cellulose synthase-like protein G2-like [Glycine max] Back     alignment and taxonomy information
>gi|224111028|ref|XP_002315722.1| predicted protein [Populus trichocarpa] gi|222864762|gb|EEF01893.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query345
TAIR|locus:2138116 722 CSLG2 "AT4G24000" [Arabidopsis 0.956 0.457 0.394 2.6e-63
TAIR|locus:2138106 751 CSLG3 "AT4G23990" [Arabidopsis 0.973 0.447 0.387 1.4e-62
TAIR|locus:2138126 760 CSLG1 "AT4G24010" [Arabidopsis 0.973 0.442 0.387 1e-61
TAIR|locus:2012050 729 CSLE1 "AT1G55850" [Arabidopsis 0.765 0.362 0.438 2.3e-55
TAIR|locus:2060211 755 CSLB04 "AT2G32540" [Arabidopsi 0.750 0.343 0.397 1.5e-53
TAIR|locus:2060263 755 CSLB03 "AT2G32530" [Arabidopsi 0.736 0.336 0.400 2.4e-51
TAIR|locus:2024745 1181 CSLD5 "AT1G02730" [Arabidopsis 0.402 0.117 0.446 4.3e-50
UNIPROTKB|Q2QNS6 1215 CSLD4 "Cellulose synthase-like 0.402 0.114 0.431 4.6e-50
TAIR|locus:2178935 1026 IRX3 "IRREGULAR XYLEM 3" [Arab 0.736 0.247 0.409 1.3e-49
TAIR|locus:2060216 757 CSLB02 "AT2G32620" [Arabidopsi 0.739 0.336 0.405 2.6e-49
TAIR|locus:2138116 CSLG2 "AT4G24000" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 646 (232.5 bits), Expect = 2.6e-63, P = 2.6e-63
 Identities = 139/352 (39%), Positives = 202/352 (57%)

Query:     6 LHLCKPYKLSSILNRLYSLIHVTALTSLIYYRVXXXXXXXXXXXXXXXXXXXXXXXXXXX 65
             LH C P +  +I  R+Y++ H   + +L+Y+ V                           
Sbjct:    11 LHTCHPCR-RTIPYRIYAVFHTCGIIALMYHHVHSIVNANNTLITCLLLLSDIVLAFMWA 69

Query:    66 XXXXXXXXWNPVSRRVFPERLPENEQNLPAIDVFICTADPKKEPPLEVMNTVLSAMALDY 125
                      NP+ R  +PE+     ++ P +DVFICTADP KEPP+ V+NT LS MA +Y
Sbjct:    70 TTTSLRL--NPIHRTEYPEKYAAKPEDFPKLDVFICTADPYKEPPMMVVNTALSVMAYEY 127

Query:   126 PSKKLHVYLSDDAGSALTLLALRQACAFASSWLPFCRRFGIKTRCPKVYFSNLN---DDH 182
             PS K+ VY+SDD GS+LTL AL +A  F+  WLPFC+   ++ R P+VYFS+ +    D 
Sbjct:   128 PSHKISVYVSDDGGSSLTLFALMEAAKFSKHWLPFCKNNNVQDRSPEVYFSSKSHSSSDE 187

Query:   183 CFTRSVEYEKERVNIKRKYELFK-EHIRIAEEEKSSA----TDKI----NPSIVEVIIDK 233
                  + YE  +  ++   E  K E   IA ++ S      TDK     +P+I+ +++  
Sbjct:   188 AENLKMMYEDMKSRVEHVVESGKVETAFIACDQFSCVFDLWTDKFTRHDHPTII-MVLQH 246

Query:   234 SDDEVRANQVEMPLLVYVSREKRPPHPHHFKAGALNCLLRVSSILSNSPYILVLDCDMFC 293
             ++ E+      MP L+YVSREK    PHHFKAGALN LLRVS++++NSP IL LDCDM+ 
Sbjct:   247 NETEM------MPNLIYVSREKSKVSPHHFKAGALNTLLRVSAVMTNSPIILTLDCDMYS 300

Query:   294 NDPTSAKQAMCFHLDPKLSPSLAFVQFPQKFHNISSNDIYDSQLRTTFQVHS 345
             N+PT+   A+C+  DPK++  L FVQFPQKF  ++ NDIY S+L+  F +++
Sbjct:   301 NNPTTPLHALCYLSDPKINFDLGFVQFPQKFQGVNKNDIYASELKRPFDINT 352
GO:0000271 "polysaccharide biosynthetic process" evidence=ISS
GO:0005794 "Golgi apparatus" evidence=ISM
GO:0016020 "membrane" evidence=IEA
GO:0016740 "transferase activity" evidence=ISS
GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS
GO:0016759 "cellulose synthase activity" evidence=ISS
GO:0016760 "cellulose synthase (UDP-forming) activity" evidence=IEA
GO:0030244 "cellulose biosynthetic process" evidence=IEA
TAIR|locus:2138106 CSLG3 "AT4G23990" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2138126 CSLG1 "AT4G24010" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2012050 CSLE1 "AT1G55850" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2060211 CSLB04 "AT2G32540" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2060263 CSLB03 "AT2G32530" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2024745 CSLD5 "AT1G02730" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q2QNS6 CSLD4 "Cellulose synthase-like protein D4" [Oryza sativa Japonica Group (taxid:39947)] Back     alignment and assigned GO terms
TAIR|locus:2178935 IRX3 "IRREGULAR XYLEM 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2060216 CSLB02 "AT2G32620" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.4.1LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
fgenesh4_pg.C_LG_X000693
hypothetical protein (723 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query345
PLN02893 734 PLN02893, PLN02893, Cellulose synthase-like protei 1e-115
pfam03552 716 pfam03552, Cellulose_synt, Cellulose synthase 3e-73
PLN02638 1079 PLN02638, PLN02638, cellulose synthase A (UDP-form 4e-72
PLN02190 756 PLN02190, PLN02190, cellulose synthase-like protei 1e-71
PLN02915 1044 PLN02915, PLN02915, cellulose synthase A [UDP-form 2e-71
PLN02189 1040 PLN02189, PLN02189, cellulose synthase 4e-70
PLN02195 977 PLN02195, PLN02195, cellulose synthase A 2e-68
PLN02436 1094 PLN02436, PLN02436, cellulose synthase A 4e-68
PLN02400 1085 PLN02400, PLN02400, cellulose synthase 9e-67
PLN02248 1135 PLN02248, PLN02248, cellulose synthase-like protei 6e-63
TIGR03030 713 TIGR03030, CelA, cellulose synthase catalytic subu 2e-13
cd06421234 cd06421, CESA_CelA_like, CESA_CelA_like are involv 2e-10
cd06421234 cd06421, CESA_CelA_like, CESA_CelA_like are involv 4e-10
PRK11498 852 PRK11498, bcsA, cellulose synthase catalytic subun 2e-07
COG1215 439 COG1215, COG1215, Glycosyltransferases, probably i 1e-04
cd06423180 cd06423, CESA_like, CESA_like is the cellulose syn 4e-04
cd00761156 cd00761, Glyco_tranf_GTA_type, Glycosyltransferase 0.001
>gnl|CDD|215483 PLN02893, PLN02893, Cellulose synthase-like protein Back     alignment and domain information 
 Score =  350 bits (899), Expect = e-115
 Identities = 153/362 (42%), Positives = 220/362 (60%), Gaps = 34/362 (9%)

Query: 5   PLHLCKPYKLSSILNRLYSLIHVTALTSLIYYRVSSLASTPLASLPAQLLVFALELLLSL 64
           PLH C P +  +I NR++++++  A+ +L+Y+ V +L  +   +    LL+   +++L+ 
Sbjct: 13  PLHTCHPMR-RTIANRVFAVVYSCAILALLYHHVIALLHST--TTLITLLLLLADIVLAF 69

Query: 65  LWLLNQAYLWNPVSRRVFPERLPE--NEQNLPAIDVFICTADPKKEPPLEVMNTVLSAMA 122
           +W   QA+   PV RRVF E L     E + P +DVFICTADP KEPP+ V+NT LS MA
Sbjct: 70  MWATTQAFRMCPVHRRVFIEHLEHYAKESDYPGLDVFICTADPYKEPPMGVVNTALSVMA 129

Query: 123 LDYPSKKLHVYLSDDAGSALTLLALRQACAFASSWLPFCRRFGIKTRCPKVYFSNLNDDH 182
            DYP++KL VY+SDD GS LTL A  +A  FA+ WLPFC++  I  RCP+ YFS+  + H
Sbjct: 130 YDYPTEKLSVYVSDDGGSKLTLFAFMEAAKFATHWLPFCKKNKIVERCPEAYFSS--NSH 187

Query: 183 CFTRSVEYEKERVNIKRKYELFK------------EHIRIAEEEKSSA----TDKI---- 222
            ++   E       IK  YE  K                I  +++  A    TDK     
Sbjct: 188 SWSPETE------QIKMMYESMKVRVENVVERGKVSTDYITCDQEREAFSRWTDKFTRQD 241

Query: 223 NPSIVEVIIDKSDDEVRANQVEMPLLVYVSREKRPPHPHHFKAGALNCLLRVSSILSNSP 282
           +P++++V+++   D+       MP L+YVSREK    PHHFKAGALN LLRVS+ ++N+P
Sbjct: 242 HPTVIQVLLESGKDKDITGHT-MPNLIYVSREKSKNSPHHFKAGALNTLLRVSATMTNAP 300

Query: 283 YILVLDCDMFCNDPTSAKQAMCFHLDPKLSPSLAFVQFPQKFHNISSNDIYDSQLRTTFQ 342
            IL LDCDM+ NDP +  +A+C+ LDP + P L +VQFPQ FH I+ NDIY  +L+  FQ
Sbjct: 301 IILTLDCDMYSNDPQTPLRALCYLLDPSMDPKLGYVQFPQIFHGINKNDIYAGELKRLFQ 360

Query: 343 VH 344
           ++
Sbjct: 361 IN 362

Length = 734
>gnl|CDD|217611 pfam03552, Cellulose_synt, Cellulose synthase Back     alignment and domain information
>gnl|CDD|215343 PLN02638, PLN02638, cellulose synthase A (UDP-forming), catalytic subunit Back     alignment and domain information
>gnl|CDD|215122 PLN02190, PLN02190, cellulose synthase-like protein Back     alignment and domain information
>gnl|CDD|215494 PLN02915, PLN02915, cellulose synthase A [UDP-forming], catalytic subunit Back     alignment and domain information
>gnl|CDD|215121 PLN02189, PLN02189, cellulose synthase Back     alignment and domain information
>gnl|CDD|215124 PLN02195, PLN02195, cellulose synthase A Back     alignment and domain information
>gnl|CDD|215239 PLN02436, PLN02436, cellulose synthase A Back     alignment and domain information
>gnl|CDD|215224 PLN02400, PLN02400, cellulose synthase Back     alignment and domain information
>gnl|CDD|215138 PLN02248, PLN02248, cellulose synthase-like protein Back     alignment and domain information
>gnl|CDD|234095 TIGR03030, CelA, cellulose synthase catalytic subunit (UDP-forming) Back     alignment and domain information
>gnl|CDD|133043 cd06421, CESA_CelA_like, CESA_CelA_like are involved in the elongation of the glucan chain of cellulose Back     alignment and domain information
>gnl|CDD|133043 cd06421, CESA_CelA_like, CESA_CelA_like are involved in the elongation of the glucan chain of cellulose Back     alignment and domain information
>gnl|CDD|236918 PRK11498, bcsA, cellulose synthase catalytic subunit; Provisional Back     alignment and domain information
>gnl|CDD|224136 COG1215, COG1215, Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>gnl|CDD|133045 cd06423, CESA_like, CESA_like is the cellulose synthase superfamily Back     alignment and domain information
>gnl|CDD|132997 cd00761, Glyco_tranf_GTA_type, Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 345
PLN02436 1094 cellulose synthase A 100.0
PLN02915 1044 cellulose synthase A [UDP-forming], catalytic subu 100.0
PLN02400 1085 cellulose synthase 100.0
PLN02638 1079 cellulose synthase A (UDP-forming), catalytic subu 100.0
PLN02189 1040 cellulose synthase 100.0
PLN02195 977 cellulose synthase A 100.0
PLN02248 1135 cellulose synthase-like protein 100.0
PLN02893 734 Cellulose synthase-like protein 100.0
PLN02190 756 cellulose synthase-like protein 100.0
PF03552 720 Cellulose_synt: Cellulose synthase; InterPro: IPR0 100.0
TIGR03030 713 CelA cellulose synthase catalytic subunit (UDP-for 100.0
PRK11498 852 bcsA cellulose synthase catalytic subunit; Provisi 100.0
PRK05454 691 glucosyltransferase MdoH; Provisional 99.91
cd04191254 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elon 99.87
COG1215 439 Glycosyltransferases, probably involved in cell wa 99.85
PRK14583 444 hmsR N-glycosyltransferase; Provisional 99.82
TIGR03111 439 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR0 99.81
PRK11204 420 N-glycosyltransferase; Provisional 99.79
cd06421234 CESA_CelA_like CESA_CelA_like are involved in the 99.77
cd06437232 CESA_CaSu_A2 Cellulose synthase catalytic subunit 99.76
TIGR03472 373 HpnI hopanoid biosynthesis associated glycosyl tra 99.73
cd06427241 CESA_like_2 CESA_like_2 is a member of the cellulo 99.72
cd06435236 CESA_NdvC_like NdvC_like proteins in this family a 99.68
TIGR03469 384 HonB hopene-associated glycosyltransferase HpnB. T 99.67
cd06439251 CESA_like_1 CESA_like_1 is a member of the cellulo 99.65
cd02520196 Glucosylceramide_synthase Glucosylceramide synthas 99.63
PRK14716 504 bacteriophage N4 adsorption protein B; Provisional 99.63
PF13641228 Glyco_tranf_2_3: Glycosyltransferase like family 2 99.62
cd06436191 GlcNAc-1-P_transferase N-acetyl-glucosamine transf 99.61
PRK11234 727 nfrB bacteriophage N4 adsorption protein B; Provis 99.59
cd04192229 GT_2_like_e Subfamily of Glycosyltransferase Famil 99.58
cd06434235 GT2_HAS Hyaluronan synthases catalyze polymerizati 99.58
cd06438183 EpsO_like EpsO protein participates in the methano 99.57
cd04184202 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like prot 99.52
cd04190 244 Chitin_synth_C C-terminal domain of Chitin Synthas 99.51
cd04195201 GT2_AmsE_like GT2_AmsE_like is involved in exopoly 99.51
cd04196214 GT_2_like_d Subfamily of Glycosyltransferase Famil 99.5
cd02525 249 Succinoglycan_BP_ExoA ExoA is involved in the bios 99.45
PLN02726243 dolichyl-phosphate beta-D-mannosyltransferase 99.44
PRK10073 328 putative glycosyl transferase; Provisional 99.39
PRK10018 279 putative glycosyl transferase; Provisional 99.39
PTZ00260 333 dolichyl-phosphate beta-glucosyltransferase; Provi 99.38
cd06423180 CESA_like CESA_like is the cellulose synthase supe 99.36
PF00535169 Glycos_transf_2: Glycosyl transferase family 2; In 99.36
cd06442224 DPM1_like DPM1_like represents putative enzymes si 99.35
cd06433202 GT_2_WfgS_like WfgS and WfeV are involved in O-ant 99.35
PRK15489 703 nfrB bacteriophage N4 adsorption protein B; Provis 99.34
cd02510 299 pp-GalNAc-T pp-GalNAc-T initiates the formation of 99.33
cd04179185 DPM_DPG-synthase_like DPM_DPG-synthase_like is a m 99.32
cd06420182 GT2_Chondriotin_Pol_N N-terminal domain of Chondro 99.32
PRK13915 306 putative glucosyl-3-phosphoglycerate synthase; Pro 99.31
cd06913219 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltran 99.27
cd04188211 DPG_synthase DPG_synthase is involved in protein N 99.25
cd04185202 GT_2_like_b Subfamily of Glycosyltransferase Famil 99.25
cd04186166 GT_2_like_c Subfamily of Glycosyltransferase Famil 99.24
PRK10063248 putative glycosyl transferase; Provisional 99.23
cd02522221 GT_2_like_a GT_2_like_a represents a glycosyltrans 99.21
COG2943 736 MdoH Membrane glycosyltransferase [Cell envelope b 99.16
cd04187181 DPM1_like_bac Bacterial DPM1_like enzymes are rela 99.13
PRK10714 325 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabi 99.13
COG0463291 WcaA Glycosyltransferases involved in cell wall bi 99.1
cd02511229 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 98.99
cd00761156 Glyco_tranf_GTA_type Glycosyltransferase family A 98.98
cd02526237 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl tr 98.95
TIGR01556 281 rhamnosyltran L-rhamnosyltransferase. Rhamnolipids 98.64
PF10111 281 Glyco_tranf_2_2: Glycosyltransferase like family 2 98.59
COG1216 305 Predicted glycosyltransferases [General function p 98.41
KOG2978238 consensus Dolichol-phosphate mannosyltransferase [ 98.28
KOG2977323 consensus Glycosyltransferase [General function pr 98.23
cd02514334 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an es 97.98
PF13506175 Glyco_transf_21: Glycosyl transferase family 21 97.79
PF03142 527 Chitin_synth_2: Chitin synthase; InterPro: IPR0048 97.5
KOG2547 431 consensus Ceramide glucosyltransferase [Lipid tran 96.92
KOG3738 559 consensus Predicted polypeptide N-acetylgalactosam 96.43
KOG3737 603 consensus Predicted polypeptide N-acetylgalactosam 96.17
KOG3736 578 consensus Polypeptide N-acetylgalactosaminyltransf 95.87
PF1370497 Glyco_tranf_2_4: Glycosyl transferase family 2 95.64
PF13712217 Glyco_tranf_2_5: Glycosyltransferase like family; 94.02
PF03452269 Anp1: Anp1; InterPro: IPR005109 The members of thi 89.54
PF03071434 GNT-I: GNT-I family; InterPro: IPR004139 The biosy 88.54
PF13632 193 Glyco_trans_2_3: Glycosyl transferase family group 87.91
KOG2571 862 consensus Chitin synthase/hyaluronan synthase (gly 84.55
>PLN02436 cellulose synthase A Back     alignment and domain information 
Probab=100.00  E-value=5.5e-97  Score=786.23  Aligned_cols=338  Identities=36%  Similarity=0.645  Sum_probs=314.7

Q ss_pred             CCCCceecccCcch-hHHHHHHHHHHHHHHHHHHHHhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCC
Q 041635            3 PLPLHLCKPYKLSS-ILNRLYSLIHVTALTSLIYYRVSSLASTPLASLPAQLLVFALELLLSLLWLLNQAYLWNPVSRRV   81 (345)
Q Consensus         3 ~~~l~~~~~~~~~~-~~~R~~~~~~li~~~~YL~wR~~~~~~~~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r~~   81 (345)
                      .+|||++.+.+..+ +.||+++++.+++++++|.||+++....   ..|+|+++++||+||+++|+|+|+.||.|++|.+
T Consensus       270 ~~pL~~~~~i~~~~~~pyR~~~~~rlv~l~~fl~yRi~~~~~~---a~~~Wl~s~~cE~WFaf~Wll~Q~~Kw~Pv~R~t  346 (1094)
T PLN02436        270 RQPLSRKLPIPSSKINPYRMIIILRLVILGLFFHYRILHPVND---AYGLWLTSVICEIWFAVSWILDQFPKWYPIERET  346 (1094)
T ss_pred             CCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHhhccCcc---cHHHHHHHHHHHHHHHHHHHHccCccccccccee
Confidence            58999999998644 4699999999999999999999885432   4889999999999999999999999999999999


Q ss_pred             CCCCCCcC------CCCCCeeEEEeeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhhHHHHHHHHhhhc
Q 041635           82 FPERLPEN------EQNLPAIDVFICTADPKKEPPLEVMNTVLSAMALDYPSKKLHVYLSDDAGSALTLLALRQACAFAS  155 (345)
Q Consensus        82 ~~~~l~~~------~~~~P~VdV~V~tynp~~Ep~~~v~~tv~s~laldYP~~kl~V~v~DDg~s~~t~~~l~ea~~~a~  155 (345)
                      ++++|.++      +++||.|||||||.||.||||.+++|||+|+||+|||.+||.|||+|||++.+|+++|.||++||+
T Consensus       347 ~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~FAk  426 (1094)
T PLN02436        347 YLDRLSLRYEKEGKPSELASVDVFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFAR  426 (1094)
T ss_pred             CHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHHHHHHHHHHHHH
Confidence            99887653      256999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cchhHHHHhCCccCCCcccccCCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhhh------------ccccc----
Q 041635          156 SWLPFCRRFGIKTRCPKVYFSNLNDDHCFTRSVEYEKERVNIKRKYELFKEHIRIAEEE------------KSSAT----  219 (345)
Q Consensus       156 ~W~~~c~~~~v~~r~p~~yf~~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~~i~~~~~~------------~~~~~----  219 (345)
                      +||||||||+|||||||+||+.+.++++++.+|+|.+||++||++||+||+|||.+.+.            +.+.|    
T Consensus       427 ~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mKreYEe~K~RIe~l~~~~~~vp~~~~~m~dgt~W~g~~  506 (1094)
T PLN02436        427 KWVPFCKKFSIEPRAPEWYFSQKMDYLKNKVHPAFVRERRAMKREYEEFKVKINALVATAQKVPEDGWTMQDGTPWPGNN  506 (1094)
T ss_pred             hhcccccccCCCcCCHHHHhhccCCcccccCChhHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhhhhccCccCCCCC
Confidence            99999999999999999999999998899999999999999999999999999986542            12333    


Q ss_pred             cCCCccceEEeecCCCchhhhcccccCceEEEeccCCCCCCCCChhhHHHHHHhhcccCCCCCEEEEecCCCCCCChHHH
Q 041635          220 DKINPSIVEVIIDKSDDEVRANQVEMPLLVYVSREKRPPHPHHFKAGALNCLLRVSSILSNSPYILVLDCDMFCNDPTSA  299 (345)
Q Consensus       220 ~~~~~~i~~~~~~~~~~~~~~~~~~~P~l~yv~R~k~~g~~~~~KAGalN~~l~~s~~~s~~~~i~~~DaD~~~~~p~~L  299 (345)
                      .++||+||||++++.++ .|.++.++|+|+||+||||||++||+||||||+++|+|+++||||||+++||||+.|||+++
T Consensus       507 ~~dHp~IIqVll~~~~~-~d~~g~~LP~LVYVSREKRPg~~Hh~KAGAMNaLlRVSavmTNaP~ILNLDCDmYiNns~a~  585 (1094)
T PLN02436        507 VRDHPGMIQVFLGHSGV-RDVEGNELPRLVYVSREKRPGFDHHKKAGAMNSLIRVSAVLSNAPYLLNVDCDHYINNSKAL  585 (1094)
T ss_pred             CCCCccceEEEecCCCC-cccccccCceEEEEecccCCCCCcchhhhhhhhhhhhheeecCCceEEecccccccCchHHH
Confidence            28999999999998653 46678899999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhchhcCCCCCCcEEEEeCCceecCCCCCCccccccceeeeec
Q 041635          300 KQAMCFHLDPKLSPSLAFVQFPQKFHNISSNDIYDSQLRTTFQVH  344 (345)
Q Consensus       300 ~~~v~~f~Dp~~g~~va~VQtPQ~F~n~~~~Dp~~~~~~~f~~~~  344 (345)
                      |++||||+||+.|+++|||||||+|+|++++|+|+|++++|||+.
T Consensus       586 r~AMCfllD~~~g~~~afVQFPQrF~gi~k~D~Y~n~~~vffdi~  630 (1094)
T PLN02436        586 REAMCFMMDPQSGKKICYVQFPQRFDGIDRHDRYSNRNVVFFDIN  630 (1094)
T ss_pred             HHhhhhhcCCccCCeeEEEcCCcccCCCCCCCcccccceEeeecc
Confidence            999999999999999999999999999999999999999999984

>PLN02915 cellulose synthase A [UDP-forming], catalytic subunit Back     alignment and domain information
>PLN02400 cellulose synthase Back     alignment and domain information
>PLN02638 cellulose synthase A (UDP-forming), catalytic subunit Back     alignment and domain information
>PLN02189 cellulose synthase Back     alignment and domain information
>PLN02195 cellulose synthase A Back     alignment and domain information
>PLN02248 cellulose synthase-like protein Back     alignment and domain information
>PLN02893 Cellulose synthase-like protein Back     alignment and domain information
>PLN02190 cellulose synthase-like protein Back     alignment and domain information
>PF03552 Cellulose_synt: Cellulose synthase; InterPro: IPR005150 Cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues, is the major component of wood and thus paper, and is synthesized by plants, most algae, some bacteria and fungi, and even some animals Back     alignment and domain information
>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming) Back     alignment and domain information
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional Back     alignment and domain information
>PRK05454 glucosyltransferase MdoH; Provisional Back     alignment and domain information
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan Back     alignment and domain information
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PRK14583 hmsR N-glycosyltransferase; Provisional Back     alignment and domain information
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111 Back     alignment and domain information
>PRK11204 N-glycosyltransferase; Provisional Back     alignment and domain information
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose Back     alignment and domain information
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex Back     alignment and domain information
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI Back     alignment and domain information
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily Back     alignment and domain information
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase Back     alignment and domain information
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB Back     alignment and domain information
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily Back     alignment and domain information
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis Back     alignment and domain information
>PRK14716 bacteriophage N4 adsorption protein B; Provisional Back     alignment and domain information
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A Back     alignment and domain information
>cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine Back     alignment and domain information
>PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional Back     alignment and domain information
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan Back     alignment and domain information
>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis Back     alignment and domain information
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis Back     alignment and domain information
>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin Back     alignment and domain information
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis Back     alignment and domain information
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan Back     alignment and domain information
>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase Back     alignment and domain information
>PRK10073 putative glycosyl transferase; Provisional Back     alignment and domain information
>PRK10018 putative glycosyl transferase; Provisional Back     alignment and domain information
>PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional Back     alignment and domain information
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily Back     alignment and domain information
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1 Back     alignment and domain information
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis Back     alignment and domain information
>PRK15489 nfrB bacteriophage N4 adsorption protein B; Provisional Back     alignment and domain information
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans Back     alignment and domain information
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily Back     alignment and domain information
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase Back     alignment and domain information
>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional Back     alignment and domain information
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine Back     alignment and domain information
>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation Back     alignment and domain information
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>PRK10063 putative glycosyl transferase; Provisional Back     alignment and domain information
>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function Back     alignment and domain information
>COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1 Back     alignment and domain information
>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional Back     alignment and domain information
>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide Back     alignment and domain information
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold Back     alignment and domain information
>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase Back     alignment and domain information
>TIGR01556 rhamnosyltran L-rhamnosyltransferase Back     alignment and domain information
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ] Back     alignment and domain information
>COG1216 Predicted glycosyltransferases [General function prediction only] Back     alignment and domain information
>KOG2978 consensus Dolichol-phosphate mannosyltransferase [General function prediction only] Back     alignment and domain information
>KOG2977 consensus Glycosyltransferase [General function prediction only] Back     alignment and domain information
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides Back     alignment and domain information
>PF13506 Glyco_transf_21: Glycosyl transferase family 21 Back     alignment and domain information
>PF03142 Chitin_synth_2: Chitin synthase; InterPro: IPR004835 Chitin synthase (2 Back     alignment and domain information
>KOG2547 consensus Ceramide glucosyltransferase [Lipid transport and metabolism; Cell wall/membrane/envelope biogenesis] Back     alignment and domain information
>KOG3738 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG3737 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG3736 consensus Polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF13704 Glyco_tranf_2_4: Glycosyl transferase family 2 Back     alignment and domain information
>PF13712 Glyco_tranf_2_5: Glycosyltransferase like family; PDB: 2QGI_A 2NXV_B Back     alignment and domain information
>PF03452 Anp1: Anp1; InterPro: IPR005109 The members of this family (Anp1, Van1 and Mnn9) are membrane proteins required for proper Golgi function Back     alignment and domain information
>PF03071 GNT-I: GNT-I family; InterPro: IPR004139 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2 Back     alignment and domain information
>KOG2571 consensus Chitin synthase/hyaluronan synthase (glycosyltransferases) [Cell wall/membrane/envelope biogenesis] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query345
4hg6_A 802 Cellulose synthase subunit A; membrane translocati 99.96
1qg8_A 255 Protein (spore coat polysaccharide biosynthesis P 99.6
3bcv_A240 Putative glycosyltransferase protein; protein stru 99.59
2z86_A 625 Chondroitin synthase; GT-A, glycosyltransferase A, 99.52
1xhb_A 472 Polypeptide N-acetylgalactosaminyltransferase 1; g 99.51
3ckj_A 329 Putative uncharacterized protein; mycobacteria, un 99.44
2d7i_A 570 Polypeptide N-acetylgalactosaminyltransferase 10; 99.44
2ffu_A 501 Ppgalnact-2, polypeptide N-acetylgalactosaminyltra 99.44
2z86_A 625 Chondroitin synthase; GT-A, glycosyltransferase A, 99.44
3f1y_A 387 Mannosyl-3-phosphoglycerate synthase; GT-A type gl 99.31
3l7i_A 729 Teichoic acid biosynthesis protein F; GT-B fold, m 99.22
4fix_A 657 UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 99.07
2bo4_A 397 Mannosylglycerate synthase; catalysis, glycosyltra 98.77
2nxv_A 249 ATP synthase subunits region ORF 6; majastridin, A 98.63
2fy7_A287 Beta-1,4-galactosyltransferase 1; M339H mutant, AP 98.34
2wvl_A391 Mannosyl-3-phosphoglycerate synthase; GT-A fold, t 98.2
2zu9_A 394 Mannosyl-3-phosphoglycerate synthase; GT-A fold, g 98.12
1fo8_A343 Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetyl 98.03
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides} Back     alignment and structure
Probab=99.96  E-value=4.6e-28  Score=259.02  Aligned_cols=220  Identities=23%  Similarity=0.333  Sum_probs=169.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhhccCCCC-C-hhHHHHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCCCCcCCCCCC
Q 041635           17 ILNRLYSLIHVTALTSLIYYRVSSLASTPL-A-SLPAQLLVFALELLLSLLWLLNQAYLWNPVSRRVFPERLPENEQNLP   94 (345)
Q Consensus        17 ~~~R~~~~~~li~~~~YL~wR~~~~~~~~~-~-~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r~~~~~~l~~~~~~~P   94 (345)
                      .+..+++++.++++++|++||++.+++... . +.++|+.++++|+++.+.+++..+..++|..|...++.   .++.+|
T Consensus        64 ~~~~~~~~~~~~~~~~y~~wr~~~tl~~~~~~~~~~~~~~ll~~~~~~~~~~l~~~~~~~~~~~r~~~~~~---~~~~~P  140 (802)
T 4hg6_A           64 VPRFLLLSAASMLVMRYWFWRLFETLPPPALDASFLFALLLFAVETFSISIFFLNGFLSADPTDRPFPRPL---QPEELP  140 (802)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTSCCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCCCCCC---CTTTCC
T ss_pred             chHHHHHHHHHHHHHHHHHHHhheecCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCC---CccCCC
Confidence            344445555555669999999999998643 3 56778888899999999999999999999888755432   256789


Q ss_pred             eeEEEeeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhhHHHHHHHHhhhccchhHHHHhCCccCCCccc
Q 041635           95 AIDVFICTADPKKEPPLEVMNTVLSAMALDYPSKKLHVYLSDDAGSALTLLALRQACAFASSWLPFCRRFGIKTRCPKVY  174 (345)
Q Consensus        95 ~VdV~V~tynp~~Ep~~~v~~tv~s~laldYP~~kl~V~v~DDg~s~~t~~~l~ea~~~a~~W~~~c~~~~v~~r~p~~y  174 (345)
                      +|+|+|||||   |+..++.+|+.|+++++||.++++|+|+|||++|.|.+.                            
T Consensus       141 ~VSViIPtyN---e~~~lL~~~L~Sl~~q~yp~~~~eIiVVDDgStD~T~~~----------------------------  189 (802)
T 4hg6_A          141 TVDILVPSYN---EPADMLSVTLAAAKNMIYPARLRTVVLCDDGGTDQRCMS----------------------------  189 (802)
T ss_dssp             CEEEEEECTT---CCHHHHHHHHHHHHTSSCCTTCCEEEEESTTCHHHHHTC----------------------------
T ss_pred             cEEEEEEECC---CCHHHHHHHHHHHHhccCCCCcEEEEEEECCCCcccccc----------------------------
Confidence            9999999999   998888999999999999999999999999999987421                            


Q ss_pred             ccCCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccceEEeecCCCchhhhcccccCceEEEecc
Q 041635          175 FSNLNDDHCFTRSVEYEKERVNIKRKYELFKEHIRIAEEEKSSATDKINPSIVEVIIDKSDDEVRANQVEMPLLVYVSRE  254 (345)
Q Consensus       175 f~~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~P~l~yv~R~  254 (345)
                                 ..|+..++..+.....+++..+                                      .++.|+.|+
T Consensus       190 -----------~d~~i~~~~~~~~~~l~~~~~~--------------------------------------~~v~~i~~~  220 (802)
T 4hg6_A          190 -----------PDPELAQKAQERRRELQQLCRE--------------------------------------LGVVYSTRE  220 (802)
T ss_dssp             -----------SSHHHHHHHHHHHHHHHHHHHH--------------------------------------HTCEEEECS
T ss_pred             -----------CCHHHHHHHHhhhHHHHHHHHh--------------------------------------cCcEEEEec
Confidence                       0122222211111111111110                                      125788887


Q ss_pred             CCCCCCCCChhhHHHHHHhhcccCCCCCEEEEecCCCCCCChHHHHHHhchhc-CCCCCCcEEEEeCCceecCCCCCCcc
Q 041635          255 KRPPHPHHFKAGALNCLLRVSSILSNSPYILVLDCDMFCNDPTSAKQAMCFHL-DPKLSPSLAFVQFPQKFHNISSNDIY  333 (345)
Q Consensus       255 k~~g~~~~~KAGalN~~l~~s~~~s~~~~i~~~DaD~~~~~p~~L~~~v~~f~-Dp~~g~~va~VQtPQ~F~n~~~~Dp~  333 (345)
                      +    ++++|+||+|.|++.    ++|++|+++|||+++. |++|++++.+|. ||+    +++||+|+.+.|.   |++
T Consensus       221 ~----~~~GKa~alN~gl~~----a~gd~Il~lDaD~~~~-pd~L~~lv~~~~~dp~----v~~V~~~~~~~~~---~~~  284 (802)
T 4hg6_A          221 R----NEHAKAGNMSAALER----LKGELVVVFDADHVPS-RDFLARTVGYFVEDPD----LFLVQTPHFFINP---DPI  284 (802)
T ss_dssp             S----CCSHHHHHHHHHHHH----CCCSEEEECCTTEEEC-TTHHHHHHHHHHHSSS----CCEEECCCCBSSC---CHH
T ss_pred             C----CCCcchHHHHHHHHh----cCCCEEEEECCCCCcC-hHHHHHHHHHHhcCCC----eEEEeccEEEeCC---chH
Confidence            5    457899999999998    8999999999999998 999999999996 888    8999999999985   554


Q ss_pred             cc
Q 041635          334 DS  335 (345)
Q Consensus       334 ~~  335 (345)
                      ..
T Consensus       285 ~~  286 (802)
T 4hg6_A          285 QR  286 (802)
T ss_dssp             HH
T ss_pred             hh
Confidence            43
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A* Back     alignment and structure
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis} Back     alignment and structure
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* Back     alignment and structure
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17 Back     alignment and structure
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A Back     alignment and structure
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A* Back     alignment and structure
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A* Back     alignment and structure
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* Back     alignment and structure
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A* Back     alignment and structure
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A* Back     alignment and structure
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A* Back     alignment and structure
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A* Back     alignment and structure
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A* Back     alignment and structure
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ... Back     alignment and structure
>2wvl_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, transferase, glycosyltransferase, retaining mecha glucosyl transferase; HET: GDD; 2.81A {Thermus thermophilus} PDB: 2wvk_A* 2wvm_A* Back     alignment and structure
>2zu9_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, glycosyltransferase, GT55, GDP, cytoplasm, magnesium, transferase; HET: GDP; 2.00A {Pyrococcus horikoshii} PDB: 2zu7_A* 2zu8_A* Back     alignment and structure
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query345
d1xhba2 328 Polypeptide N-acetylgalactosaminyltransferase 1, N 99.62
d1qg8a_ 255 Spore coat polysaccharide biosynthesis protein Sps 99.61
d1omza_ 265 Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-Ga 99.42
d2bo4a1 381 Mannosylglycerate synthase, MGS {Rhodothermus mari 98.3
d1fo8a_343 N-acetylglucosaminyltransferase I {Rabbit (Oryctol 94.77
d1w55a1205 IspD/IspF bifunctional enzyme, CDP-me synthase dom 83.92
>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
domain: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.62  E-value=7.5e-16  Score=143.46  Aligned_cols=119  Identities=19%  Similarity=0.113  Sum_probs=94.5

Q ss_pred             CCCCCeeEEEeeccCCCCCChHHHHHHHHHHHcCCCCCCceEEEEEcCCCChhhHHHHHHHHhhhccchhHHHHhCCccC
Q 041635           90 EQNLPAIDVFICTADPKKEPPLEVMNTVLSAMALDYPSKKLHVYLSDDAGSALTLLALRQACAFASSWLPFCRRFGIKTR  169 (345)
Q Consensus        90 ~~~~P~VdV~V~tynp~~Ep~~~v~~tv~s~laldYP~~kl~V~v~DDg~s~~t~~~l~ea~~~a~~W~~~c~~~~v~~r  169 (345)
                      ++++|.|+|+||+||   |....+.+||.|++++.||....+|+|+||||++.|.....+.         +.++      
T Consensus        18 ~~~~P~vSIIIp~yN---e~~~~l~~~l~Si~~qt~~~~~~EIIvVDdgS~d~~~~~~l~~---------~~~~------   79 (328)
T d1xhba2          18 PDNLPTTSVVIVFHN---EAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLES---------YVKK------   79 (328)
T ss_dssp             CSCCCCEEEEEEESS---CCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHHHH---------HHHS------
T ss_pred             CCCCCCEEEEEeccC---CcHHHHHHHHHHHHhcCCCCCCeEEEEEECCCChhhHHHHHHH---------HHHh------
Confidence            467899999999999   9866789999999999999866799999999999765332221         1111      


Q ss_pred             CCcccccCCCCCcccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccceEEeecCCCchhhhcccccCceE
Q 041635          170 CPKVYFSNLNDDHCFTRSVEYEKERVNIKRKYELFKEHIRIAEEEKSSATDKINPSIVEVIIDKSDDEVRANQVEMPLLV  249 (345)
Q Consensus       170 ~p~~yf~~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~P~l~  249 (345)
                                                                                                ..+.+.
T Consensus        80 --------------------------------------------------------------------------~~~~i~   85 (328)
T d1xhba2          80 --------------------------------------------------------------------------LKVPVH   85 (328)
T ss_dssp             --------------------------------------------------------------------------SSSCEE
T ss_pred             --------------------------------------------------------------------------cCCCeE
Confidence                                                                                      112355


Q ss_pred             EEeccCCCCCCCCChhhHHHHHHhhcccCCCCCEEEEecCCCCCCChHHHHHHhchhcCCC
Q 041635          250 YVSREKRPPHPHHFKAGALNCLLRVSSILSNSPYILVLDCDMFCNDPTSAKQAMCFHLDPK  310 (345)
Q Consensus       250 yv~R~k~~g~~~~~KAGalN~~l~~s~~~s~~~~i~~~DaD~~~~~p~~L~~~v~~f~Dp~  310 (345)
                      ++..+++     .+.++|.|.|+..    ++|++|+++|+|..+. |++|.+++..|.+..
T Consensus        86 vi~~~~n-----~G~~~a~N~Gi~~----a~gd~i~flD~D~~~~-p~~l~~l~~~~~~~~  136 (328)
T d1xhba2          86 VIRMEQR-----SGLIRARLKGAAV----SRGQVITFLDAHCECT-AGWLEPLLARIKHDR  136 (328)
T ss_dssp             EEECSSC-----CCHHHHHHHHHHH----CCSSEEEEEESSEEEC-TTCHHHHHHHHHHCT
T ss_pred             EEEeccc-----ccchHHHHHHHHh----hhcceeeecCcccccC-hhHHHHHHHHHhcCC
Confidence            6655544     4599999999998    8999999999999998 999999999998544
>d1qg8a_ c.68.1.1 (A:) Spore coat polysaccharide biosynthesis protein SpsA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1omza_ c.68.1.15 (A:) Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d2bo4a1 c.68.1.18 (A:2-382) Mannosylglycerate synthase, MGS {Rhodothermus marinus [TaxId: 29549]} Back     information, alignment and structure
>d1fo8a_ c.68.1.10 (A:) N-acetylglucosaminyltransferase I {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d1w55a1 c.68.1.13 (A:3-207) IspD/IspF bifunctional enzyme, CDP-me synthase domain {Campylobacter jejuni [TaxId: 197]} Back     information, alignment and structure