Citrus Sinensis ID: 041780
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 422 | ||||||
| 449447325 | 409 | PREDICTED: uncharacterized protein LOC10 | 0.943 | 0.973 | 0.538 | 1e-127 | |
| 449517126 | 409 | PREDICTED: uncharacterized protein LOC10 | 0.943 | 0.973 | 0.536 | 1e-126 | |
| 388514999 | 416 | unknown [Lotus japonicus] | 0.947 | 0.961 | 0.556 | 1e-119 | |
| 357465653 | 438 | hypothetical protein MTR_3g104000 [Medic | 0.947 | 0.913 | 0.565 | 1e-119 | |
| 224088948 | 418 | predicted protein [Populus trichocarpa] | 0.978 | 0.988 | 0.574 | 1e-119 | |
| 357465649 | 435 | hypothetical protein MTR_3g103980 [Medic | 0.954 | 0.926 | 0.550 | 1e-119 | |
| 357465663 | 434 | hypothetical protein MTR_3g104070 [Medic | 0.959 | 0.933 | 0.531 | 1e-118 | |
| 357465657 | 424 | Carboxyl-terminal proteinase [Medicago t | 0.969 | 0.964 | 0.558 | 1e-118 | |
| 357496467 | 410 | hypothetical protein MTR_6g012620 [Medic | 0.905 | 0.931 | 0.560 | 1e-115 | |
| 297812809 | 413 | hypothetical protein ARALYDRAFT_351609 [ | 0.969 | 0.990 | 0.516 | 1e-113 |
| >gi|449447325|ref|XP_004141419.1| PREDICTED: uncharacterized protein LOC101213587 [Cucumis sativus] | Back alignment and taxonomy information |
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Score = 460 bits (1183), Expect = e-127, Method: Compositional matrix adjust.
Identities = 229/425 (53%), Positives = 292/425 (68%), Gaps = 27/425 (6%)
Query: 2 EKTVYLFLLFGAIS--TLCNGVEVNAKARKTLPEIDRKLKLLNRPAVKSIKSEDGDIIDC 59
++ V + + G + + N N + +L +I+ KLKLLN+P++K+I SEDGDI++C
Sbjct: 6 DEVVMVLAMVGLVVGVAIVNVNATNVEMNLSLLQIENKLKLLNKPSIKTIYSEDGDIMEC 65
Query: 60 VDIYKQPALDHPALKNHTIQLSPSFDIPAEKVDRRNES--SRLPVTIQTWQKSGSCPNGT 117
VD+YKQPA DHP LKNHTIQ+ P I + +NES SRL QTWQKSGSCP GT
Sbjct: 66 VDVYKQPAFDHPLLKNHTIQMKPDLSIDLKMSSTQNESFGSRL-YPFQTWQKSGSCPKGT 124
Query: 118 VPIRRIRRQDLLRASSLQQFGRKVPEVSYAANRTDATHSKFESINNKTIHLGPLVDRSAA 177
+PIRR+ R+DLLRA+SL FG+K P Y ++ LG +RS A
Sbjct: 125 IPIRRVGREDLLRANSLHHFGKKFP---YGDSK-----------------LGQEFNRSTA 164
Query: 178 VLVTVGFNYIGAQGDINVWNPRVESPDDYTTAQIWLKGGPGDNFESVEGGWVVNPKLYGD 237
+L+T G NYIGA G+INVWNP+V+ P+D+T +++WLK GP + FESVE GW+VNPKLYGD
Sbjct: 165 ILITTGVNYIGASGNINVWNPKVDLPNDFTASKVWLKNGPSEKFESVEAGWMVNPKLYGD 224
Query: 238 KLTRLFVYWTKDSYKSTGCFDAICSGFVQTG-QVALGAAIGPWSISEGPQYYLPVGIYLD 296
TRL +YWT DSYK+TGCFD CSGFVQT VA+GA I P S + G QY + +GI+ D
Sbjct: 225 AKTRLSLYWTVDSYKTTGCFDLTCSGFVQTNPSVAIGAVIEPLSSTNGQQYTISIGIFQD 284
Query: 297 PNTKNWWLKVNGNIVVGYWPGSLFSYLSYSAILVEWGGQVYSPNVKKTPHTKTAMGSGSF 356
P++ NWWLK GN VGYWP +LF YL +SA LVEWGG+V+S N+K PHT T MGSG +
Sbjct: 285 PHSGNWWLKFQGN-PVGYWPSTLFGYLDHSATLVEWGGEVFSSNIKIVPHTGTGMGSGDY 343
Query: 357 SHGLQGSACSIEHVRIIDFSLQLKYPQWVGTWADEYYCYDAYNYVKGYTTEPVFFFGGPG 416
+ GL A ++ RI+D+SLQLKYP VGTWADE CY NY + YTTEPVF+FGGPG
Sbjct: 344 ASGLYEYASFVKEPRIVDYSLQLKYPDRVGTWADEPSCYSVDNYQQSYTTEPVFYFGGPG 403
Query: 417 QNPIC 421
+ C
Sbjct: 404 LSRDC 408
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449517126|ref|XP_004165597.1| PREDICTED: uncharacterized protein LOC101231919 [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|388514999|gb|AFK45561.1| unknown [Lotus japonicus] | Back alignment and taxonomy information |
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| >gi|357465653|ref|XP_003603111.1| hypothetical protein MTR_3g104000 [Medicago truncatula] gi|355492159|gb|AES73362.1| hypothetical protein MTR_3g104000 [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|224088948|ref|XP_002308584.1| predicted protein [Populus trichocarpa] gi|222854560|gb|EEE92107.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|357465649|ref|XP_003603109.1| hypothetical protein MTR_3g103980 [Medicago truncatula] gi|355492157|gb|AES73360.1| hypothetical protein MTR_3g103980 [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|357465663|ref|XP_003603116.1| hypothetical protein MTR_3g104070 [Medicago truncatula] gi|355492164|gb|AES73367.1| hypothetical protein MTR_3g104070 [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|357465657|ref|XP_003603113.1| Carboxyl-terminal proteinase [Medicago truncatula] gi|355492161|gb|AES73364.1| Carboxyl-terminal proteinase [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|357496467|ref|XP_003618522.1| hypothetical protein MTR_6g012620 [Medicago truncatula] gi|355493537|gb|AES74740.1| hypothetical protein MTR_6g012620 [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|297812809|ref|XP_002874288.1| hypothetical protein ARALYDRAFT_351609 [Arabidopsis lyrata subsp. lyrata] gi|297320125|gb|EFH50547.1| hypothetical protein ARALYDRAFT_351609 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 422 | ||||||
| TAIR|locus:2180647 | 432 | AT5G25950 "AT5G25950" [Arabido | 0.969 | 0.946 | 0.521 | 8.4e-113 | |
| TAIR|locus:2180542 | 352 | AT5G25960 [Arabidopsis thalian | 0.563 | 0.676 | 0.542 | 1.8e-101 | |
| TAIR|locus:2050579 | 402 | AT2G44240 [Arabidopsis thalian | 0.552 | 0.579 | 0.424 | 2.5e-83 | |
| TAIR|locus:2167121 | 420 | AT5G56530 "AT5G56530" [Arabido | 0.938 | 0.942 | 0.403 | 1.3e-82 | |
| TAIR|locus:2050528 | 403 | AT2G44220 [Arabidopsis thalian | 0.606 | 0.635 | 0.392 | 2.5e-79 | |
| TAIR|locus:2050487 | 445 | AT2G44210 [Arabidopsis thalian | 0.850 | 0.806 | 0.410 | 1.1e-78 | |
| TAIR|locus:2035666 | 422 | AT1G55360 [Arabidopsis thalian | 0.874 | 0.874 | 0.395 | 2.7e-77 | |
| TAIR|locus:2092870 | 419 | AT3G13510 [Arabidopsis thalian | 0.931 | 0.937 | 0.374 | 9e-77 | |
| TAIR|locus:2026815 | 465 | AT1G70550 [Arabidopsis thalian | 0.568 | 0.516 | 0.392 | 6.8e-71 | |
| TAIR|locus:2019933 | 467 | AT1G10750 [Arabidopsis thalian | 0.573 | 0.518 | 0.391 | 8.6e-71 |
| TAIR|locus:2180647 AT5G25950 "AT5G25950" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 1113 (396.9 bits), Expect = 8.4e-113, P = 8.4e-113
Identities = 220/422 (52%), Positives = 281/422 (66%)
Query: 4 TVYLFLLFGAISTLCNGVEVNAKARKTLPEIDRKLKLLNRPAVKSIKSEDGDIIDCVDIY 63
T+ FL+F LC G A + +L +ID KLK LN+PA+K+IKSEDGDIIDC+DIY
Sbjct: 19 TMRFFLIF---VILC-GFYNEAYGKGSL-DIDLKLKALNKPALKTIKSEDGDIIDCIDIY 73
Query: 64 KQPALDHPALKNHTIQLSPSFDIPAEKVDRRNESSRLPVTIQTWQKSGSCPNGTVPIRRI 123
KQ A DHPALKNH IQ+ PS +K N S + Q W KSG CP GT+P+RR+
Sbjct: 74 KQHAFDHPALKNHKIQMKPSVKFGTKKTTIPNNGSSEHIKSQIWSKSGKCPMGTIPVRRV 133
Query: 124 RRQDLLRASSLQQFGRKVPEVSYAANRTDATHS-KFESINNKTIHLGPLVDRSAAVLVTV 182
R+D+ RASS FGRK P Y+ H F K P + RS A +V +
Sbjct: 134 SREDISRASSPSHFGRKTPH-KYSFLDNALQHKGNFNITPAKINEAQPRL-RSEAFIVAL 191
Query: 183 GFNYIGAQGDINVWNP-RVESPDDYTTAQIWLKGGPGDNFESVEGGWVVNPKLYGDKLTR 241
GFN++GAQ DIN+WNP RVE+ D Y+TAQIWL GG +NFESVEGGW+VNP ++GD TR
Sbjct: 192 GFNFVGAQSDINIWNPPRVEATD-YSTAQIWLVGGLSENFESVEGGWMVNPAVFGDSRTR 250
Query: 242 LFVYWTKDSYKSTGCFDAICSGFVQTGQ-VALGAAIGPWSISEGPQYYLPVGIYLDPNTK 300
LF+ WT D Y TGC + +C+GFVQT + ALGA + P S S QY++ V I+LDPN+
Sbjct: 251 LFISWTTDGYTKTGCINLLCAGFVQTSKKFALGATVEPVSSSSSTQYHITVSIFLDPNSG 310
Query: 301 NWWLKVNGNIVVGYWPGSLFSYLSYSAILVEWGGQVYSPNVK-KTPHTKTAMGSGSFSHG 359
NWWL N V+GYWPG+LF+YL +SA V+WGG+V+SPNV K PHT TAMGSG ++
Sbjct: 311 NWWLTCENN-VLGYWPGTLFNYLKHSATAVQWGGEVHSPNVVLKKPHTTTAMGSGQWASY 369
Query: 360 LQGSACSIEHVRIIDFSLQLKYPQWVGTWADEYYCYDAYNYVKGYTTEPVFFFGGPGQNP 419
+ AC ++RI D+S+QLKYPQ++ +ADEY CY + K Y +EP F+FGGPG+N
Sbjct: 370 IWAEACFHTNLRIKDYSMQLKYPQFLSEYADEYNCYSTLLHRKTYMSEPHFYFGGPGRNS 429
Query: 420 IC 421
C
Sbjct: 430 RC 431
|
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| TAIR|locus:2180542 AT5G25960 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2050579 AT2G44240 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2167121 AT5G56530 "AT5G56530" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2050528 AT2G44220 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2050487 AT2G44210 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2035666 AT1G55360 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2092870 AT3G13510 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2026815 AT1G70550 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2019933 AT1G10750 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 422 | |||
| pfam03080 | 230 | pfam03080, DUF239, Domain of unknown function (DUF | 2e-84 | |
| pfam14365 | 117 | pfam14365, DUF4409, Domain of unknown function (DU | 9e-36 |
| >gnl|CDD|217358 pfam03080, DUF239, Domain of unknown function (DUF239) | Back alignment and domain information |
|---|
Score = 257 bits (659), Expect = 2e-84
Identities = 102/234 (43%), Positives = 138/234 (58%), Gaps = 8/234 (3%)
Query: 186 YIGAQGDINVWNPRVESPDDYTTAQIWLKGGP-GDNFESVEGGWVVNPKLYGDKLTRLFV 244
Y GAQ INV+NP+V++P+ ++ +QIW+ GP + S++ GW VNP LYGD TRLF
Sbjct: 1 YYGAQATINVYNPKVQNPNQFSLSQIWIVNGPENGDLNSIQAGWQVNPSLYGDNRTRLFT 60
Query: 245 YWTKDSYKSTGCFDAICSGFVQTGQ-VALGAAIGPWSISEGPQYYLPVGIYLDPNTKNWW 303
YWT D Y TGC++ +C GFVQ +ALG AI P S+ G QY + + I+ DP T NWW
Sbjct: 61 YWT-DGYNKTGCYNLLCPGFVQVSSKIALGGAISPVSVYGGKQYDITLLIWKDPKTGNWW 119
Query: 304 LKVNGNIVVGYWPGSLFSYLSYSAILVEWGGQVYSPNVKKTPHTKTAMGSGSFSHGLQGS 363
L N V+GYWP SLF++LS A +VEWGG+VYSP H MGSG F G
Sbjct: 120 LTYGNNTVIGYWPSSLFTHLSSGATMVEWGGEVYSP---PGGHPSPPMGSGHFPEEGFGK 176
Query: 364 ACSIEHVRIIDFSLQLKYPQWVG--TWADEYYCYDAYNYVKGYTTEPVFFFGGP 415
A +++++D +L P T+AD CY+ + F++GGP
Sbjct: 177 AAYFRNIKVVDEDNKLVKPDEDKLETFADSPNCYNVKDGGYTGEWGHAFYYGGP 230
|
This is a family of plant and bacterial proteins, a small number of which are putative carboxy-terminal peptidases. Length = 230 |
| >gnl|CDD|206533 pfam14365, DUF4409, Domain of unknown function (DUF4409) | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 422 | |||
| PF03080 | 229 | DUF239: Domain of unknown function (DUF239); Inter | 100.0 | |
| PF14365 | 117 | DUF4409: Domain of unknown function (DUF4409) | 100.0 |
| >PF03080 DUF239: Domain of unknown function (DUF239); InterPro: IPR004314 This is a family of plant proteins, a small number of which are putative peptidases (see for example Q9XIN9 from SWISSPROT) | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-83 Score=612.56 Aligned_cols=225 Identities=46% Similarity=0.912 Sum_probs=214.4
Q ss_pred EeeeEEEEeeecCCcCCCCCceeEEEEeccCC-CCCcceEEEEEEEcccccCCCceEEEEEEeecCcccCcccCCCCCce
Q 041780 186 YIGAQGDINVWNPRVESPDDYTTAQIWLKGGP-GDNFESVEGGWVVNPKLYGDKLTRLFVYWTKDSYKSTGCFDAICSGF 264 (422)
Q Consensus 186 ~~Ga~a~inV~~p~v~~~~q~S~sqiwv~~g~-~~~~n~IeaGW~V~P~lYgD~~~rlf~yWt~d~y~~tGCyNl~CpGF 264 (422)
|||++|+||||+|+|+.++|||++||||++++ .+.+|+|||||+|+|+||||++||||+|||+|+|++||||||+||||
T Consensus 1 y~G~~a~i~v~~p~v~~~~q~S~~~i~i~~g~~~~~~~~i~~GW~V~P~lygd~~~~lf~~wt~d~~~~tgCyN~~CpGF 80 (229)
T PF03080_consen 1 YYGARATISVWNPKVQQPDQFSLSQIWISNGSDDDSLNSIEAGWQVYPSLYGDSRTRLFVYWTADGYQKTGCYNLDCPGF 80 (229)
T ss_pred CeeeEEEEECcCCccCCccceeheeEEEEecCCCCCCcEEEEeeeccccccCCCceEEEEEEEccCCCCcceeCCCCCcE
Confidence 79999999999999997779999999999999 78899999999999999999999999999999999999999999999
Q ss_pred EEecc-cccCccccccccCCCceeEEeEEEEEecCCCCeEEEecCceeeeeecchhchhcccCceEEEEeeEEecCCCCC
Q 041780 265 VQTGQ-VALGAAIGPWSISEGPQYYLPVGIYLDPNTKNWWLKVNGNIVVGYWPGSLFSYLSYSAILVEWGGQVYSPNVKK 343 (422)
Q Consensus 265 VQvs~-i~lG~~i~pvS~~~G~q~~i~i~I~kD~~tgnWWL~~~~~~~IGYwP~sLF~~l~~~A~~V~wGGeV~~~~~~~ 343 (422)
||+++ |+||++|+|+|+++|+|++|+|+|+||+.+|||||+++++ .|||||++||++|+++|+.|+|||||++++
T Consensus 81 Vq~s~~i~~G~~~~~~S~~gG~q~~i~~~i~kD~~~gnWWL~~~~~-~IGYwP~sLF~~l~~~A~~v~wGGeV~~~~--- 156 (229)
T PF03080_consen 81 VQVSSSIALGAAISPVSTYGGKQYEITLSIFKDPKSGNWWLYYGGE-PIGYWPKSLFTSLADGATEVEWGGEVYSPP--- 156 (229)
T ss_pred EEeCCccccceeeCCCccCCCceEEEEEEEEecCCCccEEEEEecc-eeeeehHHhhhhhhcCceEEEEEEEEeCCC---
Confidence 99999 9999999999999999999999999999999999999886 899999999999999999999999999985
Q ss_pred CCCCCCCCCCCcCCCCCCCccEEEeecEEEcCCCCccCCC--cceecccCCcceeEeecccCcCcCCeEEEeCC
Q 041780 344 TPHTKTAMGSGSFSHGLQGSACSIEHVRIIDFSLQLKYPQ--WVGTWADEYYCYDAYNYVKGYTTEPVFFFGGP 415 (422)
Q Consensus 344 ~~~~sp~MGSG~fp~~g~~~Aay~~ni~ivd~~~~~~~p~--~~~~~~d~~~CY~v~~~~~~~~~g~~f~yGGP 415 (422)
++|++|||||||||++++++|||||||+++|.++....+. .+++++|+|+||++..... .+||.+||||||
T Consensus 157 ~~~~sppMGSG~fp~~g~~~aAy~~~i~~~d~~~~~~~~~~~~~~~~~~~~~CY~~~~~~~-~~~g~~f~yGGP 229 (229)
T PF03080_consen 157 GRHTSPPMGSGHFPSEGFGKAAYFRNIQVVDSNGQFVDPNDDLLEVFADNPSCYDVSYIGD-GDWGYYFFYGGP 229 (229)
T ss_pred CCCCCCCccCCcCCCCCCCccEEEEEEEEEcCCCCCcCCcccceeEccCCCCceeEeeccC-CCcccEEEeeCC
Confidence 3589999999999999999999999999999999888774 4778999999999998733 679999999999
|
However, the structure of the protein PDB3:3eu8 has an alpha-alpha toroid fold and is similar to a glucoamylase, PDB:1ayx. Such glucoamylases are involved in breaking down complex sugars (e.g. starch). The biologically relevant state is likely to be monomeric. The putative active site is located at the centre of the toroid with a well defined large cavity. Further structural comparisons also show relationships with other glycohydrolases. |
| >PF14365 DUF4409: Domain of unknown function (DUF4409) | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 422 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 5e-09 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 57.6 bits (138), Expect = 5e-09
Identities = 64/447 (14%), Positives = 128/447 (28%), Gaps = 145/447 (32%)
Query: 17 LCNGVEVNAKARKTLPEIDRKLKLLNRPAVKSIKSEDGDIIDCVDIY------KQPALDH 70
L N +V AK + + LKL R A+ ++ V I K +
Sbjct: 119 LYNDNQVFAK--YNVSRLQPYLKL--RQALLELRPAKN-----VLIDGVLGSGKT-WVAL 168
Query: 71 PALKNHTIQLSPSFDIPAEKVDRRNESSRLPVTIQTWQKSGSCPNGTVPIRRIRRQDLLR 130
++ +Q F I W +C + +L
Sbjct: 169 DVCLSYKVQCKMDFKI-------------------FWLNLKNC---------NSPETVLE 200
Query: 131 ASSLQQFGRKV-PEVSYAANRTDATHSKFESINNKTIHLGPLVDRSAAVLVTVGFNYIGA 189
LQ+ ++ P + ++ + + SI + L +LV
Sbjct: 201 M--LQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVL-------- 250
Query: 190 QGDINVWNPRVESPDDY------TTAQI----WLKGGPGDNFESVEGGWVVNPKLYGDKL 239
NV N + + + TT +L + + P D++
Sbjct: 251 --L-NVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTP----DEV 303
Query: 240 TRLFVYWTKDSYKSTGCFD---AICSG--FVQTGQVALGAAIGPWSISEGP---QYYLPV 291
L + + D + + +++ A SI +G + V
Sbjct: 304 KSLLLKYL-----DCRPQDLPREVLTTNPRR----LSIIAE----SIRDGLATWDNWKHV 350
Query: 292 GI------------YLDPNT--KNWW-LKV---NGNIVVGYWPGSLFSYLSYSAILVEWG 333
L+P K + L V + +I P L S + W
Sbjct: 351 NCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHI-----PTILLSLI--------WF 397
Query: 334 GQVYS--PNVKKTPHTKTAMG----SGSFS-HGLQ-GSACSIE-----HVRIID-FSLQL 379
+ S V H + + + S + +E H I+D +++
Sbjct: 398 DVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPK 457
Query: 380 KYPQW--VGTWADEYYCYDAYNYVKGY 404
+ + + D+Y+ Y+++ G+
Sbjct: 458 TFDSDDLIPPYLDQYF----YSHI-GH 479
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00